LOCUS       DATAIQ010000001         1582 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_277101, whole genome shotgun sequence.
ACCESSION   DATAIQ010000001 DATAIQ010000000
VERSION     DATAIQ010000001.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1582)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1582)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1582
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_277101"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1..475
                     /locus_tag="VHN20_00005"
                     /pseudo
     CDS             1..475
                     /locus_tag="VHN20_00005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012605809.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0016811 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in linear amides
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="acetamidase/formamidase family protein"
     gene            522..707
                     /locus_tag="VHN20_00010"
     CDS             522..707
                     /locus_tag="VHN20_00010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724181.1"
                     /translation="MQLLYFLFGPLLLLVVLICADARGKPWLSAKDQGSRNGLRYIFL
                     AAVMVTLVGLMAAIPTR"
     gene            complement(819..>1582)
                     /locus_tag="VHN20_00015"
     CDS             complement(819..>1582)
                     /locus_tag="VHN20_00015"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF016115.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016812 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in cyclic amides
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HEX2724182.1"
                     /translation="RSPHGVRTQKDLPFTTPEGGNTGITAWHSNAIFINDNVATQIDG
                     LGHITHGPKNEFYNGFTSDEWGGDFGLRKADVTTIPPIVARGVLVDVAGFKNVEALPT
                     AYEITVDDIEGALRAQNVDVTPGTVVLLRTGTARFWGENGRDHAKIGQHDSAGIGLKA
                     AKWLVEQKGALALGSDTSGLEYVPPKPADSQEVGGSFNPVHVYLLVQQGVHILEFNNL
                     ERLAADRVYEFAYILTTNAIRGTVAGTALRPLALR"
BASE COUNT          249 a          533 c          532 g          268 t
ORIGIN      
        1 cgcgccggcg gcggcgcaga cggcggcggc ccgccagggc aagccgaacc accatttcct
       61 gccggcgagc gcgcagaccg tccactgggg ctatttcagc aagctcctga agccggcggt
      121 ggagatcgat tccggcgatt acgtcaccat cgagaccctc acgcatcacg ccaacgacga
      181 cgccgaacgc atgatcaagg gcgaccctgg cgccgagagc gtctacctgt ggaccaagga
      241 aaagaagggc gtggaccggc gcggtgccgg gccggtcgac ggcaagctgc tgggccgcgg
      301 ctcaggggaa ggcttcggtg tccatatctg cacgggcccc gtctacgtgc gcggcgccga
      361 gcccggcgac atcctcgagg tgcgcatcat ggacgtgaag ccgcgcccct cggccaacgg
      421 cgcccatgcc ggcaaggcat tcggcagcac cgccgcggcg tggtggggat tccatccgcc
      481 gctggctgca cgcccagcaa tgatggtata gccgaagggc catgcagctc ctgtattttc
      541 tgttcgggcc gctcctgctt ctcgtcgtgc tcatctgcgc tgacgcgcgc ggcaagccgt
      601 ggctttcggc gaaggaccaa ggctcccgaa acgggcttcg ctatatcttc ctggcggccg
      661 tcatggtgac cctggtcggc ctgatggccg ctatcccgac gcgctgacgc gcagcgccgg
      721 gacgggccgc ggcgggcctg gcggccaggc gccggcccgc acgtttcgcg cagcgccacc
      781 cgcccgcgta ggtgggaggc gccgccggag atcgaatatc agcgcagcgc gagcgggcgc
      841 aacgccgtgc cggccaccgt tccacgaatg gcgttggtcg tcagaatata ggcgaattcg
      901 tagacccgat cggcagccag ccgctcgaga ttgttgaact ccaggatatg cacgccctgc
      961 tgcacgagca gatacacgtg caccgggttg aagctgccgc ccacttcctg ggagtcggcc
     1021 ggttttggcg gcacgtattc gagccccgaa gtatccgagc cgagcgccag cgcgcccttc
     1081 tgctcgacga gccacttcgc cgccttcagc ccgatgcccg ccgagtcgtg ctggccgatc
     1141 ttggcgtggt cacggccgtt ctcgccccaa aaccgcgccg ttcccgtgcg cagcagcacg
     1201 accgtgccgg gcgtgacgtc gacattctgt gcgcgcaggg cgccttcgat gtcgtcgacg
     1261 gtgatttcat aggctgttgg cagcgcctcg acattcttga accccgcgac gtcgaccagc
     1321 acaccgcggg cgacgatcgg cgggatcgtc gtcacatcgg ctttccgcag gccgaagtcg
     1381 ccgccccatt cgtcggacgt gaagccgttg taaaactcgt tctttgggcc gtgcgtgatg
     1441 tggccgaggc cgtcgatctg cgtcgcgacg ttgtcgttga tgaagattgc attcgaatgc
     1501 caggcggtta tgccggtgtt gccgccctcc ggcgtggtga acggcaggtc cttctgggtg
     1561 cggaccccgt gcggtgagcg aa
//
LOCUS       DATAIQ010000002         2159 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_415626, whole genome shotgun sequence.
ACCESSION   DATAIQ010000002 DATAIQ010000000
VERSION     DATAIQ010000002.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2159)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2159)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2159
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_415626"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1337)
                     /locus_tag="VHN20_00020"
     CDS             complement(<1..1337)
                     /locus_tag="VHN20_00020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008965729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HEX2724183.1"
                     /translation="MAPPLIQLSDVLLTFGGTPLLDGAELSVAPGERVALVGRNGSGK
                     STLLRIAAGLVEMDRGTRFVQPGATIRYLPQEPDLTGFATARAYVEAGLGPADSAHEA
                     VHLLEQLGVSEDADPSRLSGGEGRRVALARVLAADPDIILLDEPTNHLDLPTIEWLED
                     DLGRRRAALVMISHDRRFLENLSRTTVWLDRGQTRRIDRGFADFESWRDEILANEDRE
                     QHKLGRKIAAEEHWLRYGVTARRKRNERRLGELMQLRAARRAYRGTAGKAEIVASEAE
                     RSGTLVIEADGIGKAYDGRSLVSGFSIRIQRGDRIGIVGPNGSGKTTLVNMLAGALPP
                     DTGSVRLGANLAIAMLDQHRDSLDAETTLSDALTGGGTDMVTVAGQSRHVVGYMKDFL
                     FAPEQARTPLRLLSGGERARLMLARLLARPSNVLVLDEPTNDLDLETLDVLEEL"
     gene            complement(1415..1621)
                     /locus_tag="VHN20_00025"
     CDS             complement(1415..1621)
                     /locus_tag="VHN20_00025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724184.1"
                     /translation="MGDFEKRLWEKLIANRDRLQRLADEEARHAFFGGSAVAGKNTAG
                     IERLMAEAEKSLHDLEKLVMRARP"
     gene            complement(1638..2096)
                     /locus_tag="VHN20_00030"
     CDS             complement(1638..2096)
                     /locus_tag="VHN20_00030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018266376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaiI/YqxD family protein"
                     /protein_id="HEX2724185.1"
                     /translation="MTTVYIDGDACPVKDEVYRVAGRYGLPVFVVSNSWMRVPRGAGV
                     TPVVVDGGPDAADNWIAERAAAGDVVVTADTPLADRALKAGAQAVHPAGRPFTPDSIG
                     GVLASRMIGEHLRSIGEVTRGPKPFTAADRSRFLQALDAAVVRARRALNP"
BASE COUNT          349 a          728 c          732 g          350 t
ORIGIN      
        1 agttcctcca ggacatcgag cgtctcgagg tcgagatcgt tggtcggctc gtccagcacg
       61 agcacgttcg agggtctggc caggaggcgc gccagcataa gccgggcgcg ctcgccgccc
      121 gacagcaggc gcagcggcgt ccgcgcctgc tcgggagcga acaaaaaatc cttcatgtag
      181 ccgacgacat gccgcgattg gccagccacg gtgaccatgt cggtgccgcc acccgtgagc
      241 gcgtcgctca acgtggtttc ggcgtcgaga ctgtcccggt gctgatcgag catggcgatc
      301 gccaggttcg cgccgagccg gacggagccg gtgtcgggag gaagcgcgcc cgccagcatg
      361 ttcaccagcg tggtcttgcc gctgccgttc ggaccgacga tgccgatcct gtcgccgcgc
      421 tggatgcgga tcgagaagcc cgagacgagc gagcgtccgt cgtaagcttt cccgattccg
      481 tcggcttcga tcaccagggt gccggacctc tcggcctccg aggcgacgat ctcggccttg
      541 ccggcggtgc cgcgataagc gcggcgcgca gcccgcagct gcatcagctc accgagccgg
      601 cgttcgttgc gcttccgccg ggcggtgacg ccgtagcgca accaatgctc ctccgcggcg
      661 atcttgcggc cgagcttgtg ctgctcgcga tcttcattgg caaggatctc atcccgccag
      721 ctctcgaaat cagcgaagcc acggtcgatg cgccgcgtct ggcccctatc cagccagacg
      781 gtggtgcgcg acagattttc gaggaagcga cgatcgtggc tgatcatgac caatgccgcg
      841 cgccgacggc cgaggtcgtc ctcgagccat tcgatggtgg gcaggtcgag gtgattggtc
      901 ggctcatcga gaagaatgat gtccggatcg gcggcgagaa cgcgcgcgag ggccacgcgg
      961 cggccctccc cgccagagag ccggctggga tcggcgtctt ccgagacgcc gagctgctcg
     1021 agaagatgga cggcctcgtg cgcggaatcg gcggggccga gacccgcctc gacataagcg
     1081 cgcgccgtcg caaagccggt gagatcgggt tcctggggaa ggtatcggat ggttgcgcca
     1141 ggctgcacga agcgcgtgcc gcggtccatc tcgacgaggc cggcggcgat cctcagcagc
     1201 gtcgacttgc ccgagccgtt gcggccgacg agagcgacgc gctcgccggg ggcgacggac
     1261 aactccgcgc cgtcgaggag aggggtgccg ccgaaggtga gcaggacgtc ggacagctgg
     1321 atcagaggcg gcgccatcta ccggtcgttc tcacgttcag gccttgcgac gatgcttggc
     1381 gggctgcccg ggaattgcat catggaatcg ggtgtcacgg ccgcgccctc atcacgagct
     1441 tttccaagtc gtgcagcgac ttctcggcct ctgccatgag ccgctcgatc ccggctgtgt
     1501 tcttgccggc tacggcggag ccgccgaaaa aggcatgtct tgcctcctca tccgccaacc
     1561 tttgcagccg gtcccggttc gcgatcaatt tctcccagag ccgcttttcg aaatcgccca
     1621 ttggatcgcc tcgctggtta aggatttaac gcccgtcgcg cgcgcacgac agcggcatcg
     1681 agcgcctgaa gaaagcgcga gcgatcggcc gccgtgaacg gcttcggtcc gcgcgtcacc
     1741 tcgccgatcg agcgcaggtg ctcaccgatc atgcgcgatg caaggacgcc gccgatgctg
     1801 tcgggcgtga acggccggcc ggcagggtgc accgcctgcg caccggcctt gagggcccgg
     1861 tcggcgagcg gagtatcggc cgtgacgacg acgtcgccgg ctgccgcgcg ctctgcgatc
     1921 cagttgtcgg cggcgtcagg tccgccgtcg acgaccacgg gcgtcacccc cgcgcccctc
     1981 gggacgcgca tccagctgtt tgagacgacg aagaccggca gcccgtagcg ccccgccacg
     2041 cggtagacct catccttcac cggacaggcg tctccatcga tgtaaacagt ggtcatccgc
     2101 cgggcttatc agagagagga ccgcgggcaa tcgcctcccg ccggcccccg cggataatc
//
LOCUS       DATAIQ010000003         1772 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_277181, whole genome shotgun sequence.
ACCESSION   DATAIQ010000003 DATAIQ010000000
VERSION     DATAIQ010000003.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1772)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1772)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1772
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_277181"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(21..1526)
                     /locus_tag="VHN20_00035"
     CDS             complement(21..1526)
                     /locus_tag="VHN20_00035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012709147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HEX2724186.1"
                     /translation="MDVLANLGLGFQTALGPANLLYCLIGVFLGTAIGVLPGLGPVAT
                     IAMLLPVTFGLPPTPALIMLAGIFYGAQYGGSTTAILVNLPGEPSSVVTALDGYQMAR
                     QGKAGRALATAAIGSFFAGTVATLVIALFAPPLAAFALKFGPAEYFSLMVLGLVASIV
                     LAHGSLLHALGMILLGLLLGLVGTDVNSGMARFTFELPELGDGIGFVTLAMGVFGIGD
                     IVANLEHEVSRGVAEKGISGLMPTREDWRRIVGPILRGTILGSALGILPGGGALLASF
                     GAYSFEKKISRNRAEFGRGAIEGVAAPESANNAGAQTSFIPMLTLGIPANPVMALMIG
                     AMIIQGIQPGPTVMTEQPALFWGLIVSMWIGNLMLLVLNLPLIGLWVRMIAIPYHLLY
                     PAIIVFCAIGVFSLNNNTFDVFLMALFGVLGYVFRKLGAEPAPMLLAFILGPMMEEFL
                     RRALLLSRGSPMILITSPISGVMLAFAAIALVLVLLPAFRKTREVAFQEET"
     gene            complement(1531..>1772)
                     /locus_tag="VHN20_00040"
     CDS             complement(1531..>1772)
                     /locus_tag="VHN20_00040"
                     /inference="COORDINATES: protein motif:HMM:NF018979.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter TctB
                     family protein"
                     /protein_id="HEX2724187.1"
                     /translation="GGLVALGLLLEPLGLVAALAVLILMSAAASEHFRFQWSAAAGLV
                     ALVAFCAAVFVKALGVPMPLIGAWLSPFLSPWLGG"
BASE COUNT          359 a          568 c          630 g          215 t
ORIGIN      
        1 tcgcgtggcg cgcgcggccg tcacgtctcc tcctgaaacg cgacttcacg ggtctttctg
       61 aaggccggca gcagaacgag caccagcgcg atggcggcga aggccagcat gacgccgctg
      121 atcgggctgg tgatcaggat catcgggctt ccgcgcgaga gcagaagcgc ccggcgcagg
      181 aactcctcca tcatcggtcc gaggatgaag gcgagcagca tgggcgcggg ttccgcgccg
      241 agcttcctga acacgtagcc gagcaccccg aacagggcca tcaggaacac gtcgaacgtg
      301 ttgttgttca ggctgaacac gccgatggcg cagaacacga tgatggccgg ataaagcagg
      361 tgatagggga tggcgatcat cctcacccag aggccgatca gcggcaggtt gaggacgagc
      421 agcatgaggt tgccgatcca catcgacacg atcagccccc agaacaaggc gggctgctcg
      481 gtcatcaccg tcgggccggg ctggatgccc tggatgatca tggcgccgat catcagcgcc
      541 atgaccgggt tggcgggaat gcccagggtg agcatcggga tgaaggacgt ctgcgcgccc
      601 gcattgttgg ccgattccgg ggccgccacg ccctcgatcg cgccgcggcc gaactcggcc
      661 cggttgcgcg agatcttctt ctcgaacgaa taggcgccga aggaagccag caaggccccg
      721 ccgccaggca ggatgccgag cgcggagccg aggatcgtgc cgcgcaggat cggcccgacg
      781 atgcgccgcc agtcctcgcg cgtcggcatc aggccgctga tgcccttctc ggcgacgccg
      841 cgtgaaacct cgtgctcgag attggcgacg atgtcgccaa tgccgaacac gcccatggcg
      901 agggtcacga agccgatgcc gtcgccaagc tcggggagct cgaacgtgaa gcgcgccatg
      961 ccggaattca cgtccgtgcc gacgaggccg agcagaaggc cgagcaggat catgccgagc
     1021 gcgtgcagca gcgagccatg cgcgagcacg atggaggcga cgaggccgag caccatcagc
     1081 gagaaatatt cggccgggcc gaacttcagc gcgaaggccg cgaggggagg ggcgaacaac
     1141 gcgatcacca gagtggcgac cgtgccggcg aagaaggagc cgatcgccgc cgtggcgagc
     1201 gcccgtcccg ccttgccctg gcgcgccatc tggtagccgt cgagcgcggt caccaccgac
     1261 gagggctcac ccggcaggtt gacgaggatg gccgtggtcg agccaccata ttgcgcgccg
     1321 tagaagatgc cagcgagcat gatgagcgcg ggcgtcggcg gcagcccgaa ggtgaccggc
     1381 agcagcatgg cgatggtggc gaccggcccg aggccgggca gcacgccgat cgccgtgccg
     1441 aggaaaacgc cgatcaggca gtaaagcagg ttggccggac cgagcgccgt ctggaaacca
     1501 aggccgagat tggcaagcac gtccatcgcg tcacccgccc agccatggcg acaggaaggg
     1561 cgacagccat gcgccgatca ggggcatcgg cacgccgagc gccttgacga agacggccgc
     1621 gcaaaaggcg acgagcgcga cgaggccggc ggcggcgctc cattgaaacc ggaaatgctc
     1681 gctcgccgcg gcgctcatca ggatcaggac cgccagggca gccacaaggc cgagcggttc
     1741 gagaaggagc ccgagcgcaa cgaggccgcc gg
//
LOCUS       DATAIQ010000004         1779 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_369551, whole genome shotgun sequence.
ACCESSION   DATAIQ010000004 DATAIQ010000000
VERSION     DATAIQ010000004.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1779)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1779)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1779
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_369551"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            186..1445
                     /locus_tag="VHN20_00045"
     CDS             186..1445
                     /locus_tag="VHN20_00045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018425826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavin-dependent oxidoreductase"
                     /protein_id="HEX2724188.1"
                     /translation="MRRKDLDVVIVGGGIGGVTLGLMLHRVGIKSRIFEAVAEMKPLG
                     VGINILPHSSRELGALGLEAALAARAVTTRESAFYNRYGQLIHAEPTGRFAGYEWPQF
                     SIHRGDLHTVLLDAFAERVGRDNLHTGWRCAGVEQDGAGANVHFENGRPPQRADIVID
                     CEGIHSVVRKQLYPHEGKPRYSGINMWRGVSRGKPFLSGATMVRLGWFDTAKMLIYPI
                     RDDVDGDGNQLINWVVDVETPRYLERRDWNRPGRSEDFYDRIADWRFDWLDVPELCRR
                     ADFILEFPMVDQDPLPRWSFDRLTLLGDAAHPMYPRGANGSAQAILDARSLSDCLAGM
                     EDPVAALKAYEAQRLPVTSKIVLTNRESPPDAILKEVWRRTGDKPFARIEDVISHEEL
                     VALSRSYEKVAGYDKETLASGRAAAAG"
BASE COUNT          285 a          628 c          593 g          273 t
ORIGIN      
        1 gggcaaagcg gcgcgccgac tgcgcgtccg ggtcgacggg ccgcacgccg tttgtgcggg
       61 catccggatt gccaaccttg tgcacgcgcc gtgcggacca taatctgcgc gtgacgcgca
      121 tgcgatgcgc gtctcccgcc ccgctccacc ttcaaacctg cgccggctcg cgcgagatct
      181 aaagaatgag acgcaaagat ctggacgtcg tcatcgtcgg cggcggcatc ggcggcgtga
      241 cgctcggcct gatgctgcac cgggtcggca tcaagagccg catcttcgag gccgtcgccg
      301 agatgaagcc gctcggcgtc ggcatcaaca tcctgcccca ttcctcgcgc gagctcggcg
      361 cgctcggcct cgaggcggcc ctcgcggcgc gcgcggtcac gacgcgcgaa tcggccttct
      421 acaaccgcta tggccagctg atccatgcgg agccgaccgg gcgcttcgcc ggctacgagt
      481 ggccgcaatt ctcgatccat cgcggcgatc tccacaccgt tctgctcgac gccttcgccg
      541 agcgcgtcgg ccgcgacaac ctgcacaccg gctggcgctg cgccggcgtc gagcaggatg
      601 gcgccggggc caatgtccac ttcgagaacg gccgcccgcc gcagcgcgcc gacatcgtca
      661 tcgattgcga gggcatccat tcggtcgtgc gcaagcagct ttatccgcac gaaggcaagc
      721 cgcgctattc gggcatcaac atgtggcgcg gcgtgagccg cggaaagccg ttcctgagcg
      781 gcgccaccat ggtccggctc ggctggttcg acacggccaa gatgctgatc tacccgatcc
      841 gcgacgacgt cgacggcgac ggcaaccagc tgatcaactg ggtcgtcgac gtcgagacgc
      901 cgcgctatct cgagcggcgc gactggaacc gccccggccg gagcgaggat ttttacgacc
      961 gcatcgccga ctggcgcttc gactggctcg acgtgcccga gctgtgccgg cgcgccgact
     1021 tcatcctcga attcccgatg gtcgaccagg atcccctgcc ccgctggagc ttcgaccgcc
     1081 tgacgctgct cggcgatgcc gctcatccca tgtatccgcg cggcgccaac ggctcggcgc
     1141 aggcgatcct cgatgcgcgc agcttgtcgg attgcctggc cggcatggaa gacccggtcg
     1201 cggcgctgaa ggcctacgaa gcgcagcggc tgccggtcac gtcgaagatc gtcctgacca
     1261 atcgcgaaag cccgcccgac gccatcctca aggaagtgtg gcggcgcacc ggcgacaagc
     1321 cgttcgcgcg catcgaggac gtgatctcgc acgaggagct tgtcgcgctg tcgcgcagct
     1381 acgaaaaggt cgcgggctac gacaaggaga cgcttgcgtc gggccgggcc gctgccgcag
     1441 gctgatctcg atggagtaac gacagtgagc gtggctgccg aaccgaggac cgcgtccggc
     1501 gcgcgggcga cgcccgtcgc gcgcatcggc gtgatcctgc cgaccagcaa ccgcatgtgc
     1561 atcggcccgg ccgcagccgc aggctgatga tgatggagtg acctgcagtg agcgttgctg
     1621 ctgaagcgag gaccgcgtcc ggcgcgcggg cgacgcccgt cgcgcgcatc ggcgtgatcc
     1681 tgccgaccag caaccgcatg atcgagccgc agcttccgca ttatgcgccg gccaatctcg
     1741 cggttcattt cgcgcgggcg cagctcaccg ggcgctggc
//
LOCUS       DATAIQ010000005         3318 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_46322, whole genome shotgun sequence.
ACCESSION   DATAIQ010000005 DATAIQ010000000
VERSION     DATAIQ010000005.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3318)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3318)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3318
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_46322"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..835)
                     /locus_tag="VHN20_00050"
     CDS             complement(<1..835)
                     /locus_tag="VHN20_00050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008971168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HEX2724189.1"
                     /translation="MKLKRTLATIALLAFAAVAAPEAMAQQKMVLKATDVHPLGYPTV
                     EAVVRMGKKLEEATNGRLSIQMYPSMQLGGEKEMIEQAQVGALAIARISVGPMGPLVP
                     ELNVFNLPFMFRDTAHMEKVIDGEIGQELLKKLSDHPTAGLIGLCWMNAGTRNVYNSK
                     KPVRAMEDLKGLKIRMMGNPVFVDTMNALGGNGVAMGFDQLVNAMQTGVVDGAENNYP
                     TYTSGQHYRYAKYFSLTEHLMIPEILVFSKRVWNTLSKEDQALIMKTAREAQQEQRKL
                     WY"
     gene            complement(928..1605)
                     /locus_tag="VHN20_00055"
     CDS             complement(928..1605)
                     /locus_tag="VHN20_00055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018210317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEX2724190.1"
                     /translation="MNFQMVTSSSSAALRVERELRRAIIDLELPPGTRLSEQDLARRL
                     GVSRQPVREALITLSKMRLVEILPQRGTSVVKISVDKMMEARFVREAIEVAVVRRACE
                     AFERDARTRVANLLDTQQAAATEGDHHSFRRYDEMFHMVLAMGAGCSLAWQTIEDIKA
                     HMDRVCVLTLPGSDAMLPLVEQHRAIIAAIDAQDPDRAEEAMRHHLSTILRALPRVEA
                     EHPELFE"
     gene            1752..2660
                     /locus_tag="VHN20_00060"
     CDS             1752..2660
                     /locus_tag="VHN20_00060"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX2724191.1"
                     /translation="MSKPRIGFIGVGKMGHGMAKNLVAKGFATTVLGNRNRVPVDDLV
                     AKGAAEGRDPGDVAARSDIVILCVTASPQVEQIVYGADGLLAASRSGLIVVDCSTSEP
                     DSTKKIHADFAAQGVPFVDAPLARTPKEAEEGRLNVMVGAEPEVFAAIEPVLRAFAEN
                     IFHVGGPGAGHMFKLINNFFAMGQAALIAEAVVAASKAGLEIETLFKIVSVGAPNSGI
                     FQMLVSSVLAGTYDGLQFGLDLARKDVRYYTRLTESLGVPSMLGATVHQAFIQASALG
                     YGSELVPSLIKAQAQLAGTSLPHKAS"
     gene            2717..>3318
                     /locus_tag="VHN20_00065"
     CDS             2717..>3318
                     /locus_tag="VHN20_00065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012330590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX2724192.1"
                     /translation="MAKVALSGASGNIGRVLRPRLLERGIDLRSAGGTKPLASLSDRE
                     DVMHGDLRDPAAVDRLLNGVEVLIHMAGTSVERPLPEIIENNLRGLYEVYEGARRNGV
                     RRVVFASSNHAFGMHSVKSKLPLDAPFRPDGFYGLSKVWGEAMARMYWDKHAIEGISL
                     RIGTTMGRPPENFRQLSTWMGEDDLVQLVMRSIEAEDVGYA"
BASE COUNT          543 a         1094 c         1070 g          611 t
ORIGIN      
        1 cgtaccagag cttacgctgc tcctgctgcg cctccctggc ggtcttcatg atcagcgcct
       61 gatcctcctt cgacagcgtg ttccagacgc gcttcgagaa gaccaggatc tcggggatca
      121 tcaggtgctc ggtaagggag aagtatttgg catagcggta atgctgtccc gacgtgtagg
      181 tcggatagtt gttctcggcg ccgtcgacga cgccggtctg catggcgttg accagctggt
      241 cgaagcccat ggcgacgccg ttgccgccga gggcgttcat ggtgtcgacg aagaccggat
      301 tgcccatcat gcggatcttg aggcccttga ggtcctccat cgcgcgcacc ggtttcttgc
      361 tattgtagac gttgcgcgtg cccgcgttca tccagcacag gccgatgagc ccggcggtcg
      421 gatgatcgga gagcttcttc agcagctcct ggccgatctc gccgtcgatc accttctcca
      481 tatgggcggt gtcgcggaac atgaacggca ggttaaacac gttgagctcg ggaacgagcg
      541 gccccatggg accgacgctg atgcgggcga tggccagcgc gccgacctgg gcctgctcga
      601 tcatctcctt ctcgccgccg agctgcatcg acggatacat ctggatgctg aggcggccgt
      661 tggtagcctc ctcgagcttc ttgcccatgc gcaccaccgc ctcgacggtc ggataaccca
      721 acgggtgcac gtcggtcgcc ttcaacacca tcttctgctg tgccatggcc tccggcgccg
      781 cgacggcggc gaaggccaac aacgctatgg tcgcgagtgt tcgtttcagt ttcatcgttt
      841 cctccgctgg ttcgcgccgt tggccggctg ctgttttagg tcggtcgccc gcgtacccgg
      901 gttgtccggg ccgccggcaa ttcggtctca ttcgaacaat tctggatgct ccgcctcgac
      961 gcgcggcaag gcgcgcagga tcgtcgacag gtgatggcgc atcgcctctt ccgcacggtc
     1021 gggatcctgg gcatcgatgg cggcgatgat ggcgcggtgc tgctcgacga gcggcagcat
     1081 ggcgtccgat cccggcaacg tcagcacgca gacgcggtcc atatgcgcct tgatgtcctc
     1141 gatcgtctgc caggccagag agcatcccgc tcccatcgcg aggaccatgt ggaacatctc
     1201 gtcgtagcgc cggaagctgt gatgatcgcc ttccgtggcg gccgcctgct gcgtatccag
     1261 gaggttggca acgcgcgtgc gtgcatcccg ctcgaaggcc tcgcaggcgc ggcgcacgac
     1321 cgccacctcg atcgcctcgc gcacgaagcg cgcttccatc atcttgtcga ccgagatctt
     1381 caccacggac gtgccgcgtt gcggcaggat ctcgacgaga cgcattttcg agagggtgat
     1441 cagcgcctcg cgcacgggct gccgcgagac cccgagccgc cgtgccagat cctgttccga
     1501 gagacgcgtg ccgggcggca gctccaggtc gatgatcgcc cgccgaagct cgcgctcgac
     1561 gcgcaaagcc gctgaactgg acgaggtcac catctggaag ttcatctgct gacttcccgg
     1621 cttgctggca aggcagcgcg tggctaccat accagtccat tcaagtgact ataactgcgc
     1681 tttttgccgt ggcaataggg cctaacgtgg ccactagatt ttcagcattt tactgaaagg
     1741 gagcaccgcg catgagcaag ccacgcatcg gattcatcgg ggtcggcaag atggggcacg
     1801 gcatggccaa gaacctcgtc gccaaagggt tcgcgacgac ggtgctgggc aaccgcaacc
     1861 gcgtcccggt cgacgacctt gtcgccaagg gagcggccga ggggcgtgat cccggcgacg
     1921 tcgcggcgcg ttcggacatc gtcatcctgt gcgtcaccgc atccccgcag gtggagcaga
     1981 tcgtctacgg cgccgacggc ctgctcgcag cgtcccggtc tggcctgatc gtcgtcgact
     2041 gctcgaccag cgagcccgac tcgaccaaga agattcacgc ggatttcgcg gcgcaaggcg
     2101 tgccgttcgt cgatgctccg ctggcgcgta cgccgaagga ggcggaggaa ggccggctca
     2161 acgtgatggt gggggcggag cccgaggtct tcgcggccat cgaacccgtg ctgcgagcct
     2221 tcgccgagaa catatttcat gtcggcggac cgggcgccgg ccatatgttc aagctgatca
     2281 acaatttctt cgccatgggc caggccgccc tgatcgccga ggcggtcgtc gcggcgagca
     2341 aagccgggct cgagatcgag accttgttta agatcgtcag cgtcggggcg cccaattccg
     2401 gcatcttcca gatgctggtc tcgtcggtgc tcgccggcac ctatgacggc ctgcaattcg
     2461 gcctcgacct cgcccgcaag gacgtgcgct actacacgcg tctgacggag agtctcggcg
     2521 tgccttcgat gctcggcgct accgtgcatc aggcgttcat ccaggcctcg gcgctgggct
     2581 atggttcgga actggtgccg agcctcatca aggcgcaggc gcaactcgcc ggcacgtccc
     2641 tgccccacaa ggcgtcctga cgtcggcggc gtctgccctg ccccgcggtt cacgtcatcc
     2701 tgcaagggag cccatcatgg ccaaagtcgc gctctccggc gccagcggaa acatcggccg
     2761 cgttctgcgg ccgcggctgc tcgaacgcgg catcgacctg cgctcggccg gcggcacgaa
     2821 gccgcttgcc tcgctgtccg accgcgagga cgtcatgcat ggcgacctgc gcgaccctgc
     2881 cgccgtcgac cggcttctga acggcgtcga ggtgctgatc cacatggccg ggaccagcgt
     2941 cgaacggccc ctgcccgaga tcatcgagaa caatctgcgc gggctttacg aggtgtatga
     3001 gggcgcgcgc cgcaacggcg tcaggcgcgt cgtcttcgcg agctccaacc acgccttcgg
     3061 catgcattcg gtcaagagca agctgccgct cgacgcgccg ttccggcccg acggttttta
     3121 cggcctgagc aaggtctggg gcgaggccat ggcgcgcatg tactgggaca agcacgcgat
     3181 cgagggcatc tcgctgcgca tcggcaccac catgggccgc ccgcccgaga acttccgcca
     3241 gctcagcacc tggatgggcg aggacgacct ggtgcagctc gtgatgcgct cgatcgaggc
     3301 cgaggacgtg ggctacgc
//
LOCUS       DATAIQ010000006         2350 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_369570, whole genome shotgun sequence.
ACCESSION   DATAIQ010000006 DATAIQ010000000
VERSION     DATAIQ010000006.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2350)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2350)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2350
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_369570"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..972)
                     /locus_tag="VHN20_00070"
     CDS             complement(1..972)
                     /locus_tag="VHN20_00070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008840021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015440 - ABC-type peptide transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide/dipeptide ABC transporter
                     ATP-binding protein"
                     /protein_id="HEX2724193.1"
                     /translation="MSALLRARGVTRMFSVGQGLFRPRRILHAVNGIDLDIGSGEVLG
                     IVGESGCGKSTLARILLGLLAPSSGRVELDGVDIRTLDRRAIARRVQPVFQDPYASLN
                     PRRSITSIVSLPLEVHRIGSAAQRRRTAIEMLERVGLPPRLAERYPHELSGGQRQRVA
                     IARALVMRPEIVVCDEPTSALDVSVQSQILNLLMDLRREFNLTYVFISHNLAVVEHIA
                     TRVAVMYLGRIVELAGTAALFARAKHPYTRALLASVLTPEPGLGIPETGLGLAFPDPL
                     DPPPACAFHPRCPDAIAICRRERPPLVATEGGLAACHVHAPTSAGSL"
     gene            complement(969..1934)
                     /locus_tag="VHN20_00075"
     CDS             complement(969..1934)
                     /locus_tag="VHN20_00075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009451148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2724194.1"
                     /translation="MSAALLEVEGLGIDLKTAGGPLHAVRDVSLAVGRGETLCLVGES
                     GCGKSMTALGILDLLPRGARRQARRLSFAGQDLLQGNVGDVVRGNRIAMIFQEPMTAL
                     NPVYTIGDQLTEGYRRHKKAGRSVARERAVFLLEKVGISSAGQRLGQYPHQLSGGLRQ
                     RVMIAMALMCGPELLIADEPTTALDVTIQAQILRLLADLQRELGIAILLITHDLGVVA
                     RIAHRVAVMYAGEVVETASAHELFRDPRHPYTQGLLSCIPVPGRTMSGEQLGVIRGTV
                     PSLVGDLRGCLFRDRCPHATPRCALPPPQHATPHDHAWRCILERT"
     gene            complement(1931..>2350)
                     /locus_tag="VHN20_00080"
     CDS             complement(1931..>2350)
                     /locus_tag="VHN20_00080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX2724195.1"
                     /translation="PVVILTLGLLKWDRFAVVMRSATQQTRALDYVAAAEAAGASTAR
                     IVLREVLPNIAPHLIVVATLEAASAILLEAALSFLGLGVQPPLPSWGLMIAEAKAYMF
                     FSFWLIAIPGTALAMLVFAINLAGDGLRDALSPEGRA"
BASE COUNT          409 a          754 c          859 g          328 t
ORIGIN      
        1 ctaaagcgat cccgccgagg tgggggcatg gacgtggcag gcggcgagac cgccctccgt
       61 cgcgacgagc ggggggcgct cgcggcggca gatggcgatg gcgtcagggc agcgcgggtg
      121 gaatgcgcat gccggtggcg gatcgagcgg atcggggaag gcgagaccga gcccggtttc
      181 cgggatgccg aggcctggtt ccggcgtcag caccgaggcg aggagcgccc tggtataagg
      241 atgcttggcg cgcgcgaaca aagccgcggt cccggcaagc tcgacgatcc ggcccagata
      301 catgacggcg acgcgcgtcg cgatgtgctc gacgacggcg aggttgtggc tgatgaacac
      361 gtaggtgagg ttgaactcgc ggcgcagatc catgagcagg ttgaggatct gcgattgcac
      421 cgacacgtcg agggctgagg tcggttcgtc gcagacgacg atctcgggcc gcatcacgag
      481 cgcgcgcgcg atggcgacgc gctggcgctg cccccccgac agctcgtggg gatagcgttc
      541 ggccaagcgg ggtggcaacc ccacgcgttc cagcatctcg atcgcggtgc gccgccgctg
      601 cgcagcgctg ccgatgcggt gcacctcgag cggcagcgac acgatcgagg tgatgctgcg
      661 gcgcggattg agcgacgcgt acggatcctg gaacaccggc tggacccggc gcgcgatcgc
      721 acggcggtcg agcgtgcgaa tgtccacgcc gtcgagctcg acgcggcccg aactcggcgc
      781 gagcaggccg agcagaatgc gcgccaaggt cgacttgccg cagccggatt cgccgacgat
      841 gccgagcacc tcgccggagc cgatgtcgag gtcgatgcca ttgacagcgt gcaggatgcg
      901 cctcggccgg aacagcccct gtcccacaga gaacatgcgc gtgacgccgc gggccctcag
      961 aagagcgctc atgtcctctc cagaatgcat cgccaggcgt ggtcgtgcgg cgttgcgtgc
     1021 tgcggaggtg gcaaggcgca gcgtggcgtt gcatgggggc agcggtcgcg gaacaggcag
     1081 ccgcgcagat ccccgaccag cgacggcacg gtgccgcgga tcacgccgag ctgctctccg
     1141 gacatggtgc gcccgggaac gggaatgcag ctgaggagcc cttgcgtata gggatgccgc
     1201 gggtcgcgaa acagctcgtg tgcgctcgcc gtctcgacga cctcgcccgc atacatgacg
     1261 gcgacccgat gcgcgatgcg cgcgacgacg ccgagatcgt gcgtgatgag caggatcgca
     1321 atgccgagct cgcgctgcag gtcggcgagg aggcggagga tctgtgcctg gatggtcacg
     1381 tcgagagccg tcgtcggctc gtcggcgatc aggagctccg gtccgcacat gagcgccatg
     1441 gcgatcatca cccgctggcg caggccgccg gacagctggt gcggatattg tccgaggcgt
     1501 tgtccggccg acgagatccc caccttctcg agaaggaaca cggcgcgctc gcgcgccacg
     1561 ctgcggcccg ctttcttgtg acgacggtag ccctccgtga gctggtcgcc gatggtataa
     1621 accggattga gggccgtcat cggctcctgg aagatcatgg cgatgcggtt gccgcgcacc
     1681 acgtcgccga cgttgccctg caggagatcc tggcctgcga aggacaagcg tcgcgcctgc
     1741 cgccgggcgc cgcgcggcag caggtcgagg atgccgaggg cggtcatgga cttgccgcag
     1801 ccggactcgc cgaccaggca cagggtttcg ccacgcccca ccgcaagcga gacgtcgcgt
     1861 accgcatgca gcggtccgcc ggcggtcttc agatcgatgc cgagcccctc gacctcaaga
     1921 agggcggcgc tcacgcgcgt ccctccggcg agagcgcatc ccgcaatccg tccccggcaa
     1981 ggttgatggc gaaaacaagc atggccaacg ccgtccccgg aatggcgatg agccagaagc
     2041 tgaagaacat gtaggccttg gcctcggcga tcatgagccc ccaggagggc agcggcggtt
     2101 gcacgcccag ccccagaaac gacaaggcgg cttcgagcag gattgcgctc gccgcctcga
     2161 gcgtcgcgac gacgatcagg tgcggggcga tattgggcag gacttcacga aggacgatgc
     2221 gtgccgtcga ggcgccggcg gcctcagcag cggccacata atcgagggcg cgcgtctgct
     2281 gggtggcgct gcgcatgacg accgcgaacc gatcccattt gagcaagccg agcgtcagga
     2341 tgactaccgg
//
LOCUS       DATAIQ010000007         2226 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_324, whole genome shotgun sequence.
ACCESSION   DATAIQ010000007 DATAIQ010000000
VERSION     DATAIQ010000007.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2226)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2226)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2226
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_324"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            186..1314
                     /gene="prfB"
                     /locus_tag="VHN20_00085"
     CDS             join(186..254,256..1314)
                     /gene="prfB"
                     /locus_tag="VHN20_00085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015932468.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HEX2724196.1"
                     /translation="MRAEIQSLTEAAKQSIGLLRRHLDWDTAQKRLAELNAQAEDPNL
                     WNDTDAAQKIMRERTALEDQVSGIKRLEQELDDALTLIELGEAEADDSSISEGEAVIR
                     SVQTEAARRQIETLLSGEADSNDTYLEVHSGAGGTESQDWAQMLMRMYIRWAERRKLK
                     VEVLEMTAGEEAGIKGATLQIKGHNAYGWLKTESGVHRLVRISPFDSNARRHTSFASV
                     WVYPVVDDRINIEIKESDCRIDTFRSSGAGGQHVNTTDSAVRITHIPTGIVVACQQER
                     SQHKNRATAWNMLRARLYELELKKREEKANAEAASKTDIGWGHQIRSYVLQPYQLVKD
                     LRTGMQSTSPQDVLDGEVDTFMEAALAQRVYGGGEDVEDID"
     gene            complement(1361..>2226)
                     /locus_tag="VHN20_00090"
     CDS             complement(1361..>2226)
                     /locus_tag="VHN20_00090"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEX2724197.1"
                     /translation="LPGSSGPAPEELKRKPTPEPFGLRLRGAESDGSAANAPRTPQRD
                     SRVLPAERLTRIQRALNAVEGAQLQTLHALLRAAEAQMTGLRDAVGEAGLNPDALERP
                     ARGGVGGPLVPLVIEPGAGSFDSMLRRLQASHAQLGLLRRATAALPFGRPVQGEIDLT
                     SSYGYRIDPFTRAPAMHTGIDFRADHGAPVRATGAGQVVSAEYSGGYGNMVEVDHGNG
                     VITRYAHLSAIRVAVGQAVDSATILGRVGSTGRSTGPHLHYETRLDGEAVDPQRFLRA
                     GSRLAVAQSSP"
BASE COUNT          407 a          713 c          781 g          325 t
ORIGIN      
        1 acggcgccgc ccgacaacta cgccattatg ggctatggca gcccggaagc gatggcggtc
       61 acgccggaag cggagcgcgc cgtgcgtgcc ggcaccggcg gcctctactg acgccatttc
      121 catctgttta cagccgggga cgcggcctct atgaggccgc tccgcctttt ctttgacgtc
      181 agacgatgcg cgcagaaatt caatcgctca ccgaagccgc caagcagtcg atcgggctgc
      241 tgaggaggca tctttgactg ggatacggcc cagaaacgcc tggctgagct gaacgcccag
      301 gccgaagatc cgaatctctg gaacgacacc gatgccgcgc agaagatcat gcgcgagcgc
      361 accgcgctgg aagaccaagt cagcggcatc aaacgccttg agcaggagct cgacgacgcg
      421 ctcacgctga tcgagctcgg tgaagccgag gccgacgact cgagcatcag cgagggcgaa
      481 gcggtgatcc gctccgtcca gacagaagcg gcgcgccggc agatcgagac gctgctctcg
      541 ggcgaggcag acagcaacga cacctatctc gaggtccact cgggcgccgg cggcacggaa
      601 agccaggatt gggcgcagat gctgatgcgc atgtacatcc gctgggcaga gcgtcgcaaa
      661 ttgaaggtcg aggtgctgga aatgaccgcc ggggaagagg ccggcatcaa gggcgcgacg
      721 ctgcagatca agggccacaa cgcgtacggc tggctcaaga ccgagtcggg cgtacaccgg
      781 ctggtgcgca tctcgccatt cgattcgaac gcgcggcggc acaccagctt cgcgtcggtg
      841 tgggtctatc cggttgtcga tgatcggatc aatatcgaga tcaaggaatc cgactgccgc
      901 atcgacacat tccgctcgtc gggcgcgggc ggtcagcacg tcaacacgac ggattcggcg
      961 gtgcgcatca cgcatattcc caccggcatc gtcgtcgcct gccagcagga gcgctcacag
     1021 cacaagaatc gggcaaccgc ctggaacatg ctgcgtgccc gtctttacga gctcgagctc
     1081 aagaagcgcg aggagaaggc caatgccgag gcggcctcga agaccgacat cggctggggc
     1141 catcagatcc gctcatatgt gctgcagccg taccagctgg tgaaggacct gcgcaccggc
     1201 atgcaatcga cgagcccgca ggatgtgctc gacggcgagg tcgacacctt catggaagcg
     1261 gcgctggcgc agcgcgtcta tggcggcggc gaggacgtcg aggatatcga ctgaagcatg
     1321 atccggcgaa gcggcagggc ttgccggacg gcccgcgctt tcaaggagag ctttgcgcca
     1381 ccgcgagccg cgaacctgcc cgcaggaaac gctgcgggtc gacggcctcg ccgtccagcc
     1441 gcgtctcgta atgcaggtgc gggccggtgg aacggccggt cgagccgacg cggccgagga
     1501 tcgtcgcgct gtcgacggcc tggccgacgg cgacgcggat cgcggagaga tgggcgtagc
     1561 gcgtgatcac gccgttgccg tgatcgacct cgaccatgtt gccgtagccg ccggaatatt
     1621 cggcgctgac cacctggccg gcgccggtgg cgcgtactgg cgctccgtga tcggcgcgaa
     1681 aatcgatgcc ggtatgcatg gccggagcgc gcgtgaacgg atcgatccga tagccgtagc
     1741 tgctggtcag gtcgatctcg ccttggacgg gccgtccgaa gggcagggcg gcagtggccc
     1801 ggcgcagaag gccgagctgg gcgtggctcg cctgcaggcg acgcagcatg ctgtcgaagg
     1861 acccggcgcc cggctcgatg accaggggca ccaatggccc gccgaccccg cctcgcgccg
     1921 gacgttcaag cgcatcggga ttgagaccgg cctcgccgac ggcatcgcgc agacccgtca
     1981 tctgcgcctc ggcggcacgg agcagggcat gcaaggtctg cagctgcgcg ccctcgaccg
     2041 cgttcagtgc gcgctggatc cgggtcaggc gctctgccgg caggacccgg ctgtcgcgct
     2101 gcggcgtcct tggggcattg gccgcagacc cgtccgactc ggcgccgcgc aggcgcaggc
     2161 cgaacggctc gggcgtgggt ttgcgcttga gttcttccgg agccgggccg gacgagccgg
     2221 ggaggg
//
LOCUS       DATAIQ010000008         5152 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_345, whole genome shotgun sequence.
ACCESSION   DATAIQ010000008 DATAIQ010000000
VERSION     DATAIQ010000008.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 5152)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5152)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5152
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_345"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1998
                     /locus_tag="VHN20_00095"
     CDS             <1..1998
                     /locus_tag="VHN20_00095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009492302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /protein_id="HEX2724198.1"
                     /translation="PNYYNPDRQPERAQERFAYVLSRLKEDGAISADVAAGAASERPR
                     LVAFERPRRDAGFHYVDHLDRETKALGGVESLTASSYTIRSTINPALQRATETALQDG
                     LARYELNTGRFQFQGPEANLAEAIRRIDEARKGQAATPTPSWQQALEGARLPLYDVHW
                     PAAVILQKAKAKDGEVIRVGLKDGRILPLSTWNAAMRRSLKLHDVVYVNVTETKKGGA
                     RAALRVRPSVQGAALVLENKTGRILAMAGGFSYPLSQLNRTSQAHRQPGSAFKPLTYL
                     AALGRGLQPNTLVKDTPVTLPPVGGISSRAQDYWTPKNYDGASAGLTTLRRALENSKN
                     LVTAQLLDGAVARQPEQSLQRVCELAMEAQLYLECVPHYPFVLGAQPLRLIDLAAFYA
                     AIANEGGRPSPYALESIEQGDKTIYRRTPKALVSLGSADRVAFYQLKTILQGVLERGT
                     ARAIRHLAPYVAGKTGTTDNENDAWFAGFTNDVTVVVWVGHDNADGKRRTLGRGQTGA
                     KIAIPIFEPIIQAAWQHHAAKAPLSAPSPEIAGQLIALPIDLRTGDRVAEGTPGAFTE
                     HFRLERSGRFVETQYRLVPREEAYAFRHPDPWRDGEEAGGWADDSYRGPFAQAPVRPR
                     ADVPSWRRPYGVWPWWEDEDRPVRRPRRIDPDYPWSNRQIY"
     gene            2025..3038
                     /locus_tag="VHN20_00100"
     CDS             2025..3038
                     /locus_tag="VHN20_00100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012335042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724199.1"
                     /translation="MLALVAACLAMPTVAAAQEFRIEEVPASGNVTALKPKTIAFTDY
                     RNDELADAGTGLMRFEDWAKARPIQKQLLSLYPAYVEPTISITVHGVTKPYKEKLHIY
                     VAEARFVVARPPASIDLARYVSATFLERVDGTIKHRLITPSEAMPYTDAETAHNRHPQ
                     RRWCEGGGPAICIESRYQLEGKLPIGIRLANKLEDSGKKIADHITFQSELRLLPPQEI
                     DQASLAKLTGVATPVRGVLEQSIFYVNQMMQFGRFVGVFQQHPSDPDRTLVSAFMALG
                     IETDVLEKKKEYEKVPILRNLVPAQVLVGKSSFNTGQSISAGLPDYTRNRVKAIAALL
                     ERE"
     gene            complement(3142..4908)
                     /locus_tag="VHN20_00105"
     CDS             complement(3142..4908)
                     /locus_tag="VHN20_00105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018260819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724200.1"
                     /translation="MLVYGDRTCRAGTSATLADLTRAVARATGMPCGIQRHGALVDVF
                     IEASKLVQGIADAELEARRCDADSPAQDAGMGLLMAFAVAIRQSWDTGFAQIAALSPH
                     LCRPLEATRLPESVRATDPEGYAFYALFPEAYLEAARGLGSATPNATPLRVIGIRSIG
                     TGLAALVAAALGARNPITVRPAGDPFNREIRLSDELAAGLVRDAARFAIVDEGPGLSG
                     SSFGAVADLLEDAGVPAGHIHFFPGHMNGLGPMASPRHRERWARASRRAVDFDRLILH
                     STDPAHRLESWVADLTGAAETPLHDLSGGAWRARHFSDVADWPPSHVQQERRKFLLRA
                     SGATWLLKFVGLGREGAHKFELARQLHVAGFAPEPAGCRYGFLVERWVEQATPLQPHA
                     FDRDALVSRLAAYIGFRARAFPAAPDHGASLSRLLQMARRNTELGLSAAHARQLEPWE
                     SEIVALEPRVRRVRGDNRLHPWEWLLTADGRLIKTDAIDHHAAHDLIGCQDVTWDIAG
                     ASIEFDLSAAEQAGLCAAVECVAHTRVDRRLLAFSQPCYAAFQLGYWSLASHSLAGHP
                     AEAMRTRAAADRYTEVLARLLW"
     gene            complement(4908..>5152)
                     /locus_tag="VHN20_00110"
     CDS             complement(4908..>5152)
                     /locus_tag="VHN20_00110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724201.1"
                     /translation="GIGRSATLALCVLVSRGMEPLQALELAKSRRSLVSPSPAQYEAW
                     VQWLRAWKTRARAAWDMPCFDAFKTIAYRQLQTEGT"
BASE COUNT          892 a         1777 c         1756 g          727 t
ORIGIN      
        1 ccgaactact acaatcccga ccgccagccg gagcgtgccc aggagcgctt cgcctatgtg
       61 ctgagccgcc tgaaggagga cggggcgatc tccgccgatg tcgcggccgg cgcggccagc
      121 gagaggccgc gcctcgtcgc gttcgagcgg ccgcggcggg acgccggctt ccactacgtt
      181 gatcatctcg accgcgagac gaaggcgctg ggcggggtcg aaagcctgac ggcaagttcc
      241 tacaccatcc gctcgaccat caacccggcg ctgcaacgcg cgaccgagac ggcgctgcag
      301 gacgggctcg cgcgctacga gctcaacacc gggcgcttcc agttccaggg tcccgaagcc
      361 aacctggcgg aggcgatccg gcgcatcgac gaggcccgca agggacaagc ggcaacgccg
      421 acgcccagct ggcagcaggc gctcgagggc gcgcggctgc cgctctacga cgtgcattgg
      481 ccggcggcgg tgatcctcca gaaagccaag gccaaggacg gcgaggtgat ccgcgtcggc
      541 ctcaaggacg gacgcatcct tccgctcagc acctggaatg ccgccatgcg gcgcagcctc
      601 aagctgcacg acgtcgtcta tgtgaacgtc accgagacca agaaaggtgg cgcgcgggcg
      661 gcgttgcgcg tgcggccgtc cgtgcagggc gcggcgctcg tcctcgagaa caagaccgga
      721 cgcatcctgg ccatggccgg cggcttctcg tatccgctga gccagctcaa ccgcacgagc
      781 caggcgcacc gccagccggg ctcggcgttc aagccgctca cctacctggc ggcgctcggc
      841 cgcgggctgc agcccaacac gctcgtcaag gatacgccgg tgacgctgcc gcccgtcggc
      901 ggcatcagct cgcgcgccca ggattactgg accccgaaga attacgacgg cgccagcgcc
      961 gggctgacca ccctgcggcg cgcgctcgag aactccaaga acctcgtcac ggcgcaactg
     1021 ctcgacggcg ccgtcgcgcg gcagcccgag caaagcctgc agcgcgtctg cgagctggcg
     1081 atggaagcgc agctctacct cgaatgcgtg ccgcattacc cgttcgtgct cggggcgcag
     1141 ccgctccggc tgatcgatct tgcggccttc tacgcggcca tcgccaatga agggggacgg
     1201 ccttcgccgt atgccctgga atcgatcgag cagggcgaca aaacgatcta ccggcgcacg
     1261 cccaaggcgc tggtgtcgct cggttccgcc gaccgggtcg cattctacca gctgaagacg
     1321 atcctgcagg gcgtgctgga gcgcggcacg gcgcgggcga tccgccatct cgcgccctat
     1381 gtcgccggca agaccggaac gaccgacaac gagaacgacg cctggttcgc cggcttcacc
     1441 aacgacgtca cggtcgtcgt gtgggtcggg cacgacaatg ccgacggcaa gcgccgcacg
     1501 ctcgggcgcg gccagaccgg cgccaagatc gccatcccga tcttcgagcc gatcatccag
     1561 gcggcctggc agcatcatgc cgcgaaggcg ccgctcagcg cgccttcgcc ggagatcgcg
     1621 gggcagctca tcgcgctgcc catcgacctg cgcacgggcg atcgcgtcgc cgaggggacg
     1681 ccaggcgcct tcaccgagca tttccggctc gagcgctccg gccgcttcgt cgagacgcaa
     1741 taccgcctcg tgccgcgcga ggaggcctac gcattccgcc atcccgaccc gtggcgtgac
     1801 ggcgaggaag ccggcggctg ggcggatgac agctatcgtg gcccgttcgc gcaggcaccg
     1861 gtgcggccac gggccgacgt tccctcgtgg cgcaggccat acggcgtgtg gccatggtgg
     1921 gaggacgagg acaggccggt gcggcgtccg cggcgcatcg atcccgatta cccctggtcc
     1981 aaccggcaga tctattgatg attccaatgt cgtggaaccg ccgtgtgctg gcccttgtgg
     2041 ccgcgtgcct ggccatgccg accgtggcgg cggcgcagga attccgcatc gaggaggtgc
     2101 ccgcgagcgg caacgtgacg gcgttgaagc cgaagacgat cgccttcacc gattaccgca
     2161 acgacgagct cgccgatgcc ggcaccggcc tcatgcgctt cgaagactgg gccaaggcgc
     2221 ggccgatcca gaagcagctg ctgagcctct atccggcata tgtcgagccc acgatcagca
     2281 tcaccgtgca cggcgtcact aagccgtaca aggaaaagct gcacatatac gtggccgagg
     2341 cgcgcttcgt cgtcgcccgg ccgccggctt ccatcgacct cgcgcgctac gtgtcggcga
     2401 cgtttctcga gcgcgtcgac ggcaccatca agcatcggct gatcacgccg tcggaggcga
     2461 tgccttacac ggacgcggag accgcccata accggcaccc gcagcggcgg tggtgcgaag
     2521 gcggcggtcc cgcgatctgc atcgagtcgc gctatcagct cgaaggcaag ctgccgatcg
     2581 gcatccgtct cgccaacaag ctcgaggaca gcggcaagaa gattgccgac cacatcacgt
     2641 tccagagcga gctgcggctg ctgccgccgc aggagatcga ccaggcgagc ctcgcgaagc
     2701 tgaccggggt tgcgacgcct gtgcgcggcg tcctcgagca gagcatcttt tacgtcaacc
     2761 agatgatgca gttcggcagg ttcgtgggcg tcttccagca gcacccgagc gatccggacc
     2821 gcacgctcgt gagcgccttc atggcgctcg gtatcgagac cgacgtgctc gagaagaaaa
     2881 aggaatacga gaaggttccg atcctgcgga acctcgtgcc cgcccaggtg ctggtcggca
     2941 agagctcgtt caacaccggc cagtcgatca gcgccggcct gcccgactac acgcgcaatc
     3001 gcgtcaaggc gatcgccgcg ctgctcgaac gggagtgacg ctcctccagt cattgcggag
     3061 ctcgcaacag ccatcccggc cggaggcggg tccgaaatcg agatcatcgg cacgaggccg
     3121 gttgacatgg gtgaggacgc ctcaccaaag cagccgcgca agcacctcgg tataacggtc
     3181 ggcggcggcg cgcgtgcgca tcgcctcggc gggatgaccg gcgagactgt ggctggcgag
     3241 ggaccagtag ccgagctgga aggcggcgta gcatggctgc gagaaggcga gcaggcgccg
     3301 gtcgacccgg gtgtgcgcga cgcactcgac cgcggcgcag agaccggcct gctcggcggc
     3361 ggacaaatcg aactcgatgc ttgcgccggc gatgtcccac gtgacgtcct ggcagccgat
     3421 cagatcgtgc gccgcgtggt ggtcgatcgc atcggtcttg atcagacgcc cgtcagcggt
     3481 cagcagccat tcccacgggt gaagccggtt gtcgccgcgg acacggcgca cgcgcggctc
     3541 gagggccacg atctcgctct cccatggctc gagctgccgc gcatgcgccg cgctcagccc
     3601 gagttccgtg ttgcggcgcg ccatctgcag cagccgcgac agcgatgcgc cgtggtcagg
     3661 cgccgccgga aaggcgcgcg cgcgaaagcc gatataggcg gcgagccgcg acaccagggc
     3721 gtcgcggtcg aatgcgtgcg gttgcaaagg cgtcgcctgc tcgacccagc gctcgaccag
     3781 aaagccgtag cggcaaccgg ccggctcggg cgcgaacccc gcaacatgca gttgccgcgc
     3841 cagctcgaac ttgtgcgcgc cctcgcgccc gagcccgacg aatttcaaca gccaggtcgc
     3901 accggaggcc cgcagcagga attttcggcg ctcctgctgc acatggctcg gcggccaatc
     3961 tgccacgtcg gaaaaatgac gcgctcgcca ggcgccgccg gaaagatcgt gcaacggcgt
     4021 ctccgcggcg ccggtcaaat cggccaccca gctttcgaga cggtgcgccg gatcggtcga
     4081 gtgcagaatg agcctgtcga aatccaccgc gcggcgcgag gcccgcgccc agcgctcgcg
     4141 gtggcgcggg ctcgccattg gcccgagacc gttcatgtgg ccagggaaga agtgaatgtg
     4201 ccccgccggc acgccggcat cctcgagcag atccgcgacc gctccgaaag agctgccgga
     4261 cagtcccggc ccctcgtcga cgatggcgaa gcgcgccgcg tcgcggacaa gccccgctgc
     4321 aagctcatcg ctgagtcgga tctcgcggtt gaacgggtcc cctgccggtc gcacggtgat
     4381 cggattgcgc gcgcccagcg ccgcggccac gagcgcggcg agcccggtgc cgatgctgcg
     4441 gatgccgatc acgcgcagag gcgtggcgtt tggcgtggcg ctgcccaggc cccgcgcggc
     4501 ttcgagataa gcttccggaa aaagcgcgta aaaggcgtag ccttccgggt cggtggcacg
     4561 aacgctttcc ggcaggcgcg tggcttcgag cggccggcag aggtgcggtg aaagcgcagc
     4621 gatctgcgcg aagccggtgt cccaggattg gcggatggcc acggcgaagg ccatcagcaa
     4681 gcccatgccg gcatcttgtg ccggggaatc ggcgtcgcag cggcgcgcct cgagctccgc
     4741 atcggcgatt ccctgaacga gcttggaggc ttcgatgaag acatcgacga gcgcgccatg
     4801 tcgctggata ccgcagggca ttccggtggc ccgcgcgacg gcgcgtgtca gatcggcgag
     4861 cgttgcgctc gtgccggcgc ggcaagtccg gtcgccatag accagcatca ggtgccttca
     4921 gtttgcaatt ggcgataggc gatcgtcttg aatgcgtcga agcacggcat gtcccatgcc
     4981 gcccgcgcgc gcgtcttcca cgcgcggagc cactgcaccc aggcttcgta ttgcgccggg
     5041 ctcggcgaaa cgagggaccg ccgtgacttg gcgagctcga gcgcttgcaa cggctccatg
     5101 ccgcggctga ccagcacgca aagcgcaagc gtcgccgaac ggccgatgcc gt
//
LOCUS       DATAIQ010000009         2378 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_369635, whole genome shotgun sequence.
ACCESSION   DATAIQ010000009 DATAIQ010000000
VERSION     DATAIQ010000009.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2378)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2378)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2378
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_369635"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..812
                     /locus_tag="VHN20_00115"
     CDS             <1..812
                     /locus_tag="VHN20_00115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012336038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEX2724202.1"
                     /translation="IERVNWFSTYHVHHRVADRFRKGRVFLAGDAAHIHSPVGGQGMN
                     TGIGDAVNLSWKLAAVIHGSATPALLDSYEPERIAFAQRLVATTDKAFTIVTSPGRLA
                     RFVRTKLVPRVFPHLVARDAFRRLMFRTVSQIAVNYRNGPLSAGRAGSVRGGDRLPWV
                     QLDRPEDERNDNFKPLTSLGWQVHVYGNSNPKLAQACAAKALPLHVFPWRDAVADAGL
                     RRDALYLVRPDGYVAFATPGGDARRLKQYLDTRGRAAISRLAPGPGAALPR"
     gene            complement(855..1223)
                     /locus_tag="VHN20_00120"
     CDS             complement(855..1223)
                     /locus_tag="VHN20_00120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724203.1"
                     /translation="MCVEASRHMRYSSMTQPLRPNPADFQRCVRFLCSKIESIAVRAG
                     LSAVDRRDLQWSLAAMPPAVRDRVRLMLADIEFQTEHTEPLLAFATRYLLILAQDIWD
                     TNPQARMPAPGAFGPRRTIN"
     gene            complement(1442..1906)
                     /locus_tag="VHN20_00125"
     CDS             complement(1442..1906)
                     /locus_tag="VHN20_00125"
                     /inference="COORDINATES: protein motif:HMM:TIGR02246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SgcJ/EcaC family oxidoreductase"
                     /protein_id="HEX2724204.1"
                     /translation="MPDAEPTQALTRLYHDLLAAWNRRDAPGMARLFAIDGSQVGFDG
                     SVADGRREIECHLAPIFASHPTPAFVGKVREVRAFGRDAALLRAVAGMLSPGSTDLNP
                     DLNAVQTLVASRGTDGRWRIDMFHNTPAAFHGRPHEKDELTRELRALIKPGD"
     gene            2014..>2378
                     /locus_tag="VHN20_00130"
     CDS             2014..>2378
                     /locus_tag="VHN20_00130"
                     /inference="COORDINATES: protein motif:HMM:NF014471.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015109 - chromate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015703 - chromate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromate transporter"
                     /protein_id="HEX2724205.1"
                     /translation="MHIDGEADAAERVSLLALYRVFFWIGVYSFGGGLTPWMFREVVE
                     VRSWMTRDQFLSGVAVAQVLPGVNSTNLAIFIGQRLRGVPGATTALLGMLTAPFGFVL
                     AAALIYDRLLAIPLVAVALV"
BASE COUNT          389 a          760 c          816 g          413 t
ORIGIN      
        1 aaatcgagcg ggtgaactgg ttctccacgt accacgtgca tcatcgcgtt gctgaccggt
       61 tcaggaaggg gcgcgtcttc ctggctggcg atgcggccca tatccacagt ccggtaggcg
      121 ggcaaggcat gaacacgggc atcggcgatg cggtcaacct gtcctggaaa ttggcggcgg
      181 tcatccacgg ctccgccacg cccgcgctgc tcgacagcta cgagccggag cgcatcgcat
      241 ttgcgcagcg cctcgtcgcg accaccgaca aggcgttcac catcgtgacc agcccgggcc
      301 ggctggcacg gttcgtgcgg acgaagctgg tgccgcgcgt ctttccgcat ctcgtcgcgc
      361 gcgacgcctt tcgacgcctg atgttccgca cggtgtcgca gatcgcggtc aactaccgca
      421 acggtccgct gagcgcggga cgggccggca gcgtccgtgg cggggatcgc ctgccatggg
      481 ttcaactcga ccgccccgag gacgagcgca acgacaactt caagccgctg acatcgctcg
      541 gctggcaggt gcatgtctac ggcaacagca atccgaagct ggcgcaggcc tgcgcggcga
      601 aggcccttcc gctgcacgtc tttccgtggc gagatgcggt ggcggatgca ggactgaggc
      661 gcgacgcgct ttatctcgtg cgccctgacg gttacgtcgc tttcgccacc ccgggcggcg
      721 acgcgcgccg gctcaagcaa tatctggata cgcgcggccg cgcggcgatc agccgacttg
      781 cgccgggacc tggcgccgct ctcccaagat gacgttactt gccaggaaag cgttggcctt
      841 aagcggagcc ggctctagtt gatcgtgcgc cggggcccga acgcacccgg cgcgggcatc
      901 ctggcctgag ggttcgtgtc ccagatgtcc tgagccagga tgagcaggta gcgcgtagcg
      961 aaggcgagca agggctcagt gtgttcggtc tggaactcga tatcggcaag catgagcctg
     1021 acgcgatcac ggaccgccgg cggcatcgcc gcgagcgacc attgcaaatc gcggcggtca
     1081 acggccgaaa gtccggcgcg cacggcaatg ctttcgatct tgctgcaaag aaagcgaaca
     1141 caccgctgga agtcggcggg gttgggccgc aagggctgcg tcatggaaga ataacgcatg
     1201 tgccggctcg cttcgacgca catcggcgac gttcccggca ggctcgtcga ttcgagttaa
     1261 cgtccgctga accgcaggac gggcccggtc agcgcctccg gtcgctgaca atcacgtcga
     1321 gcattgcatc acctgaaagt cggccggggt cagagcctgg aggctcgcgt aacagcccga
     1381 gcgacagcgc tgtcgacgcc cgcgcgccat cagcggggcg cagcaaggag cgttcaaacc
     1441 gtcaatcgcc tggctttatg agcgcgcgca gctcccgcgt gagctcgtcc ttctcgtgcg
     1501 gacgtccatg aaacgccgca ggcgtgttgt ggaacatgtc gattcgccag cgcccgtcgg
     1561 tgccgcgcga ggcgacgagg gtctggacgg cgttgaggtc cgggttgaga tcagtgctgc
     1621 cgggcgagag catgccggcg acggcgcgca gcagggctgc gtcgcggccg aacgcgcgca
     1681 cctcccggac cttgccgacg aaggccgggg tcggatggct ggcgaagatc ggagcgaggt
     1741 ggcattcgat ctcgcggcgc ccgtcggcga cgctgccgtc gaagccgacc tggctgccgt
     1801 cgatggcgaa aaggcgcgcc atgccgggtg catcgcgccg gttccaggcc gcgagaaggt
     1861 cgtggtagag gcgggtcagg gcctgcgtgg gctcggcgtc gggcatgcgt gtgtcctgtg
     1921 cgtctcgttc aatcttttcg tgaagcggct cgccatgtcc cgggatcatg gactagcaag
     1981 cacacgacaa ccagccgaca tgcgagatca accatgcata tagacggcga agccgacgct
     2041 gccgaacggg tctccctgct ggcgctttat cgcgtcttct tctggatcgg cgtgtacagt
     2101 ttcggcggcg ggctcacgcc atggatgttt cgcgaggtcg tcgaggttcg aagctggatg
     2161 acgcgggacc aattcctgtc cggggtggcc gttgcccaag tcctgccggg cgtgaactcg
     2221 accaaccttg ccatattcat cggccagcgg ttgcgcggcg tgcccggcgc cacgacggcg
     2281 ctgttgggaa tgctgaccgc ccccttcggc ttcgtgctcg cggcggcgct tatttatgat
     2341 cgtctcctcg ccattccgct cgtcgccgtg gcgctggt
//
LOCUS       DATAIQ010000010         1701 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_415855, whole genome shotgun sequence.
ACCESSION   DATAIQ010000010 DATAIQ010000000
VERSION     DATAIQ010000010.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1701)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1701)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1701
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_415855"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..417)
                     /locus_tag="VHN20_00135"
     CDS             complement(<1..417)
                     /locus_tag="VHN20_00135"
                     /EC_number="1.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009489456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016646 - oxidoreductase activity, acting
                     on the CH-NH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase family protein"
                     /protein_id="HEX2724206.1"
                     /translation="MFYEVAKRNHGLPHDPFKALVAPRPIGWITAVSAKGEINLSPYS
                     FFNAVSDVPPMVAFSSHGRKDALTFAEESGEFVCNLAAWDLREAVNVTSAPLPRGENE
                     MTLAGLAAAPSRMVRPPRVADAPAALECKYLQTVPLT"
     gene            complement(425..988)
                     /locus_tag="VHN20_00140"
     CDS             complement(425..988)
                     /locus_tag="VHN20_00140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015933507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase"
                     /protein_id="HEX2724207.1"
                     /translation="MNETLQLLRTRRSVAPHFLGEPGPDAQELDDLLTIAARVPDHGR
                     LVPWRFIVLEGEARSRIGEVIAAAFRADQPDADETKVAFERGRLARAPVVIAVVSRAG
                     PHVKIPDWEQVMSAGATCMNLVLAANAMGYGTSWLTEWYAFDRRVLDALGLAPDERVA
                     GFIHIGTPKERPAERPRPTLADVVTRY"
     gene            1251..>1701
                     /locus_tag="VHN20_00145"
     CDS             1251..>1701
                     /locus_tag="VHN20_00145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012335937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724208.1"
                     /translation="MNIDQRPYPRSAWSRRDLIVAALAVLAFWSAAAAMWPLTQSVVP
                     WDSKNHFYPMLRYLGSALANGELPLWNPYHFSGHPSVADPQSLLFTPTMLLFGWLVPS
                     PSMQLFDAVVFAHLLPGALAILLLFRRRRWHAAGAVVAAMVFILGGSA"
BASE COUNT          239 a          601 c          564 g          297 t
ORIGIN      
        1 cgtgagcggc acggtctgca gatacttgca ttcgagcgcc gccggcgcgt cggcgacgcg
       61 cggtggccgc accatccgcg acggcgccgc ggcgagcccg gcaagcgtca tctcgttctc
      121 gccgcgcggc agcggcgccg aggtgacgtt gacggcttcg cgcagatccc aggccgcgag
      181 gttgcacacg aactcgccgc tctcctcggc gaaggtcagc gcatccttcc tgccgtgcga
      241 cgagaacgcg accatgggcg gtacgtccga cacggcgttg aagaacgaat acggcgagag
      301 gttgatctcg cctttggcgc tgacggccgt gatccagccg atcgggcgcg gggccacgag
      361 cgccttgaac ggatcgtgcg gcagcccgtg attgcgcttg gcgacctcgt agaacatcgg
      421 cgcgtcaata ccgggtgacg acgtcggcca gggtcggccg cggccgctcg gccgggcgtt
      481 ccttgggcgt gccgatgtgg atgaatccgg cgacgcgctc gtccggcgcg aggcccaggg
      541 catcgagcac ccgccggtcg aacgcgtacc actcggtcag ccacgaggtc ccgtagccca
      601 tggcgttggc ggccaggacc aggttcatgc acgtcgcccc ggccgacatg acctgttccc
      661 agtcgggaat cttgacgtgc ggcccggccc gcgacacgac ggcgatgacc accggcgccc
      721 gcgccagccg gccgcgctcg aacgccacct tggtctcgtc ggcgtcgggc tggtcggccc
      781 ggaaggcggc ggcgatcacc tccccgatcc gcgaccgcgc ctcgccctcg agcacgatga
      841 agcgccacgg gacgagccgg ccgtggtcgg gcacgcgtgc cgcgatggtt aacagatcgt
      901 ccagttcttg cgcatccggc cccggttcgc ctagaaaatg gggcgcaacg gagcggcggg
      961 tgcgcagcaa ctgcagagtt tcgttcatca cagcttcaga tgcgtgtggg acaattggct
     1021 tcatggtgct gcgttccacg cccgtctagg cgtgacatca aggggggctg ccgtgatcgc
     1081 cggagcgggt ctcggccgtc ttaaacacaa gaagagcggt ttcaaaccgc ttccgttcat
     1141 ccccacctcg attgccccat tggacggggg ctgaagcggg ccttttccgg gccatcgtgt
     1201 gtgccccgcc gggcggggct cggcgtgcgt gggtctttaa gctggcagtg atgaacatcg
     1261 accaacgacc ctacccccgc tccgcatgga gccgccgcga cctcattgtc gcggccctgg
     1321 ccgtcctcgc cttctggtcc gcggcggcgg ccatgtggcc tctgacgcag agcgtcgtgc
     1381 cgtgggattc gaagaaccat ttctacccga tgctccgcta cctgggctcg gcgctggcca
     1441 acggcgagct tccgctctgg aatccctacc atttcagcgg ccatccgtcg gtcgccgacc
     1501 cgcaatcgct gctcttcacg cccacaatgc tgctgttcgg ctggctcgtc ccctcgccgt
     1561 ccatgcaact gttcgacgcc gtcgtcttcg cccatctcct gcccggcgcc ctcgccatcc
     1621 ttctcctctt ccggcggcgg cgctggcacg cggccggggc ggttgtcgcc gccatggtct
     1681 tcattcttgg cggctcggcg t
//
LOCUS       DATAIQ010000011         1961 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_373, whole genome shotgun sequence.
ACCESSION   DATAIQ010000011 DATAIQ010000000
VERSION     DATAIQ010000011.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1961)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1961)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1961
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_373"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..635)
                     /locus_tag="VHN20_00150"
     CDS             complement(<1..635)
                     /locus_tag="VHN20_00150"
                     /EC_number="7.6.2.14"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2724209.1"
                     /translation="MLRAENVSLSYGAEPVLEGASLGIEAGQFVSLVGPSGSGKSSLL
                     RAVMGLQGISAGRIDLQGVQGNEIGILFQDDALLPWRTAIENVALGLRLRGRDRRAAV
                     AEGKEWLARLGLAGFEARYPRELSGGQRKRVALAQVLALKPRLLLMDEPFASLDAIVR
                     ARVTQDVVDLVEQQGISVLLVTHDLEEAIALSDRVYLLSQGPRAHISQCYT"
     gene            complement(635..1687)
                     /locus_tag="VHN20_00155"
     CDS             complement(635..1687)
                     /locus_tag="VHN20_00155"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX2724210.1"
                     /translation="MGCCDKPFSLEPTLESINPDVSRRGILKGVAASAGAVATLGGAL
                     AQGKRIKLAFCSQLLCVVPYEVARAGGHFNQQGLDVELVYTRGGNAAMQALVGGAVDY
                     AATSLDVALQAFDRGADIRRFATTGRLPLFAAITSPRRAKEIQGIENLAGRTVGVSAL
                     GNADHALMLFLLRRAGVEPAKVQFATMGTNLLEAVRQGQVDVGLVQEPALTLIERAGG
                     RVLVNGMDSKDAERFFGGPYEFMGVAVRTPEVPARREEMQKLAKALASALQALQTMSP
                     EDLVKALPRELTAGADTGEIRASLERYRQALYPTSVAIDLGAANRVAESLKVAGLLKP
                     DANPTPLFDTSIAGAG"
BASE COUNT          314 a          656 c          696 g          295 t
ORIGIN      
        1 atcgtgtagc actgggaaat atgcgcccgg ggcccctgcg acagcaggta gacgcgatcc
       61 gagagggcga tcgcctcctc gaggtcgtgc gtgacgagca gcacgctgat gccctgctgc
      121 tcgacgagat cgacgacgtc ctgggtgacg cgcgcacgca cgatggcgtc gagcgaggcg
      181 aacggctcgt ccatcagcag caggcgcggc ttcagggcca gcacctgcgc gagggcgacg
      241 cgcttgcgct ggccgccgct cagctcgcgc ggatagcgcg cctcgaaccc ggcaagcccg
      301 aggcgggcga gccattcctt gccttcggcg acggcggcgc ggcggtcgcg cccgcgcagg
      361 cgcaggccga gcgccacgtt ctcgatggcg gtgcgccacg gcagcagggc gtcgtcctgg
      421 aacaggatgc cgatctcgtt cccctgcacg ccttgcaggt cgatgcggcc ggcggaaatc
      481 ccctgcaggc ccatgacggc gcgcaagagg ctgctcttgc cggagccgga cgggccgaca
      541 aggctgacga actgtccggc ctcgatcccg aggctggcgc cctcgagcac aggctcggcg
      601 ccataggaca ggctgacatt ctcggcgcgc agcatcagcc ggccccggcg atcgacgtgt
      661 cgaacagcgg cgtcgggttg gcgtcgggct tcaacagccc ggcgaccttg agcgattccg
      721 cgacgcggtt ggcggcgccg agatcgatgg cgacgctcgt cgggtagagc gcctggcgat
      781 agcgctccag cgaagcgcgg atctcgccgg tgtcggcccc ggccgtcagc tcgcgcggca
      841 gcgccttgac caggtcttcg ggagacatcg tctgaagggc ctgcaaggcg ctcgccagcg
      901 ccttggcgag cttctgcatc tcctcgcggc gggcgggcac ctcgggcgtg cgcacggcga
      961 cgcccatgaa ctcgtaaggc ccgccgaaga agcgttcggc gtccttcgaa tccatgccgt
     1021 tgacgagcac gcgcccgccg gcccgctcga tcagcgtcag cgccggttcc tgcacgagac
     1081 cgacatcgac ctggccctgg cgcacggcct cgagcagatt ggtgcccatc gtggcgaact
     1141 gcacttttgc gggctcgacc ccggcacggc gcagcaggaa cagcatcagc gcgtggtcgg
     1201 cgttgccgag cgcggagacg ccgacggtcc ggccggcgag attctcgatg ccctggatct
     1261 ccttggcgcg ccgcggcgag gtgatcgcgg cgaagagcgg cagccggccc gtcgtggcga
     1321 agcggcggat gtcggcgccg cggtcgaacg cctgcaaggc cacgtcgagc gaggtggcgg
     1381 catagtcgac ggcgccgccc acgagcgcct gcatggcggc gttgccgccg cgcgtgtaga
     1441 cgagctcgac gtcgagacct tgctgattga aatggccgcc ggcgcgcgcc acctcatagg
     1501 gcaccacgca caggagctgg ctgcagaagg cgagcttgat gcgcttgcct tgcgcgaggg
     1561 cgccgccaag cgtggcgacc gccccggccg aggcagcgac ccccttgagg atgccgcgac
     1621 ggctcacatc ggggttgatg gactcgagcg tcggttcgag agaaaagggt ttgtcgcagc
     1681 agcccatggt ctgctcctca ttcaacccct taaacccgaa cgggcgtgaa aagggtccgc
     1741 ctgctccagc gcgcacgaag gcgttatctg ggcggtcgga cgggaaaagt caaatttgct
     1801 tgtatatcag tgcaattaac gcctcatgac tgtgtaatca gatcgcggtg cccggcgcgg
     1861 atccttcaga ctggcacgcg ccgaatgcct ttggatcgct tgatccggcc ggcgaggcgg
     1921 gtatccacgg cgccggatca tgcgtaagcg tgctgcttcc g
//
LOCUS       DATAIQ010000012         3103 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_415889, whole genome shotgun sequence.
ACCESSION   DATAIQ010000012 DATAIQ010000000
VERSION     DATAIQ010000012.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3103)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3103)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3103
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_415889"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2274
                     /locus_tag="VHN20_00160"
     CDS             <1..2274
                     /locus_tag="VHN20_00160"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HEX2724211.1"
                     /translation="TPSQLVLRSDMRFDAGKREAVLATWDKMSADHEINVMLNAEVKS
                     IAGSAGNFTLTTTRGETVHAGSVVLAIGTQGNPNRMRCTGADLPHVQYQLDDPEAFVD
                     EHIVVVGAGDAGIENALGLAADPEHGNVVTILNRGADFARAKADNVKLLMEAQDNGRI
                     TVMNETTPSQVEPGWLSVDTRDGAQKVKCDRIIARMGSAAPRAFVESCGVEFSSEDRE
                     AFPKLSPNFESSTPGIYVIGALAGYPLIKHCLNQGFDVVEYINGNRDLKPADEPILQA
                     KFSELPGRRSVDEWLEFLRTNVTILNELSPLQMREFMLDSEVRYYRTGTTVFERNDPG
                     SSLFAIADGSVLVEVNPKDRKQTVTIERGSIFGEVGLISGRRRGATIRTAEDSILVEV
                     SRTAALKLMASVPGARRAVTRLSTERQLLQMFGAGRSPEDLKDVLETAELKQVKAGEA
                     IITEGETGYDIFVIRQGSMVVEKSIGGKPVFLSYLPAGSYVGEMALLNGGQRTATVRA
                     AVKSEVVRIDGTAFRQLLQRKPELLAKAKRDMAAREKLNSYVESRKDGFGGVVDMYSS
                     VATFLVDNGIGEATDVLLIDQELCIGCDNCEKACADSHEGLSRLDREAGKTYAHLHVP
                     TSCRHCEHPHCMADCPPNAIHRGADGEVFIDDSCIGCGNCQRNCPYGVIRMDRVPPKK
                     PGLLAWLLTGLGPGPGEPPSGWIEKRVPPETPKKAIKCDMCSGIAGGPACVRACPTGA
                     AIRVAPEQFLSVTRLSK"
     gene            2349..>3103
                     /locus_tag="VHN20_00165"
     CDS             2349..>3103
                     /locus_tag="VHN20_00165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724212.1"
                     /translation="MRGEARAWAMASRGIKETDLRQGASHESFLRHKQFRWLKISLLA
                     CLMAIFGYALADVQPRPNGGSWYGYFLGTIATLLILWLAMIGVRKRAITSGRWSLKAW
                     TSAHVYLGLSLVVIATLHTGFQFGWNVHTLAYALMMVVIASGIYGISVYAFLPKQLSD
                     SSAEFTRPQMLEAIAKLDRQLQLAAQPLATAETQILQRSLNDDPCRGGLVARLTGKYP
                     YCRTERARIALNARMEAATDGQKQAMIAAVNLL"
BASE COUNT          588 a          988 c         1011 g          516 t
ORIGIN      
        1 acgccgagcc agctcgtgct gcgctccgac atgcggttcg acgccggaaa acgcgaggcc
       61 gtgctcgcga cgtgggacaa gatgtcggcg gatcacgaaa tcaacgtgat gctgaacgcg
      121 gaagtgaagt ccatcgccgg cagcgccggc aacttcacgc tgacgacgac aaggggcgaa
      181 acggtccatg ccggaagcgt cgtcctcgca atcggcacgc agggaaatcc caacaggatg
      241 cggtgcacgg gcgccgatct tccccacgtc cagtatcagc tcgacgatcc cgaggcgttc
      301 gtggacgagc atatcgtcgt cgttggcgcc ggcgacgcgg gcattgaaaa tgccctcggc
      361 ctggctgccg acccggagca cggcaatgtc gtaacgatcc tcaaccgcgg cgccgatttt
      421 gcccgcgcca aggccgacaa cgtcaagctg ctgatggagg cgcaggacaa cgggcggatc
      481 acggtcatga acgagaccac gccttcgcag gtcgagcccg gctggctgtc cgtcgatacg
      541 cgcgacggcg cccagaaggt caagtgcgac aggatcatcg cccgaatggg ctcagccgcc
      601 cctcgcgctt tcgtcgagag ttgcggcgtc gagttcagca gcgaagaccg ggaggccttt
      661 ccgaagctca gcccgaactt cgaaagcagc acgccgggca tttacgtcat cggcgcgctg
      721 gcgggctatc cgttgatcaa gcattgcctg aaccagggct tcgacgtcgt cgaatacatc
      781 aacggcaatc gcgacctgaa gccggccgac gagcccatcc tccaggccaa gttcagcgaa
      841 ctgcccgggc gcagatcggt cgatgaatgg ctggagttcc tgcgcaccaa tgtgaccatc
      901 ctcaacgagc tttcgccgct gcaaatgcgc gagttcatgc tagacagcga agtgcggtac
      961 tatcgcacgg ggaccaccgt gttcgagcgc aatgatcccg gatcgtcctt gttcgcgatc
     1021 gcggacgggt ccgtgctggt ggaagtgaac ccgaaagacc gcaagcaaac ggtgacgatc
     1081 gaaagggggt cgatcttcgg cgaagtcggc ctgatttccg gtcgccgccg cggcgcgacg
     1141 atccgaaccg ccgaggattc gatcctggtc gaggtgtcgc gtaccgccgc cctgaagctg
     1201 atggcttcgg tccccggggc gcggcgcgcg gtcacgcgcc tttcgaccga gcggcagctg
     1261 ctccagatgt tcggtgcggg ccgctccccg gaggatctca aggacgttct cgaaaccgcc
     1321 gaactgaagc aggtcaaggc cggggaagcg atcatcaccg aaggcgagac aggctacgac
     1381 atcttcgtca tccgccaggg ctcgatggtc gtcgaaaagt cgatcggcgg gaaaccggtg
     1441 tttctctcct accttcccgc tggctcctac gtcggggaga tggccctcct taacggcgga
     1501 cagcgcaccg ccaccgttcg tgccgcggtc aagtcggagg tcgtcaggat cgacggcacg
     1561 gccttccgcc aactgctcca gcgcaagccc gagctgctcg ccaaggcgaa gcgcgacatg
     1621 gccgcccgcg agaagctcaa cagctatgtc gaatcgcgca aggacggatt cggcggggtc
     1681 gtcgacatgt actcgtcggt cgcgaccttt ctcgtcgaca acggcatcgg cgaggcaacc
     1741 gacgttctgc tgatcgacca ggagctttgc atcggctgcg acaattgtga aaaggcttgt
     1801 gccgacagcc acgaaggcct gtcgcgcctc gaccgggagg cggggaagac ctacgcccat
     1861 ctgcacgtgc cgacttcgtg ccgccactgc gagcatccgc attgcatggc cgattgcccg
     1921 cccaacgcga tccatcgcgg cgccgacggc gaggtgttca tcgacgatag ctgcatcggc
     1981 tgcggaaact gccagcgcaa ttgcccctac ggcgtcatcc gaatggacag ggtgccgccg
     2041 aaaaagcccg gactgctggc ctggctcttg accggccttg ggcccggacc gggcgagccg
     2101 ccgagcgggt ggatcgagaa gagggtaccg cccgagacgc ccaagaaggc gatcaaatgc
     2161 gacatgtgct ccggcatcgc cgggggcccg gcctgcgtca gggcctgccc gaccggcgcc
     2221 gccatccgcg tcgcgccgga gcaattcctg tcggtgaccc gactaagcaa gtgacatcaa
     2281 gcgcggtctg ctccaagacc acgccgtaag ggcttgcgcc ggcatcgccg gccaggttcg
     2341 atgtgcatat gcggggggag gcgcgcgcct gggcgatggc gagcaggggg atcaaggaaa
     2401 ccgatctgcg gcagggagcg agccatgaga gctttcttcg tcataagcag ttccggtggt
     2461 tgaagatttc gctccttgcc tgcttgatgg caatcttcgg ctacgctctc gccgatgtgc
     2521 agccgcggcc caatggcggc agctggtacg gctatttcct gggtacgatc gccactctgc
     2581 tcatcctgtg gctggcgatg atcggtgtgc gcaagcgggc catcaccagc gggcgctggt
     2641 cgctcaaggc gtggacttcg gcgcacgtct acctcggact ttcgctggtg gtgatcgcca
     2701 cgctgcacac cggcttccag ttcggctgga atgtccacac cctggcctac gcgctgatga
     2761 tggtggtcat cgcctcgggc atctacggaa tttcggtcta tgcgttcctg ccgaagcagc
     2821 tgagcgacag cagcgcggag ttcacaaggc cgcagatgct cgaggccatc gcgaagctgg
     2881 accggcagct ccagctggca gcgcagccgc ttgcgacggc ggagactcaa atcctgcagc
     2941 gctcgctaaa cgacgaccct tgccgcggcg ggctcgtcgc gcgcttgacc ggcaaatatc
     3001 cgtactgccg gacggagcgc gcacgcattg ccttgaacgc acggatggag gccgcgaccg
     3061 atgggcagaa gcaagcaatg attgcggcgg tgaatctgct cga
//
LOCUS       DATAIQ010000013         2458 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_415904, whole genome shotgun sequence.
ACCESSION   DATAIQ010000013 DATAIQ010000000
VERSION     DATAIQ010000013.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2458)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2458)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2458
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_415904"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..735
                     /locus_tag="VHN20_00170"
     CDS             <1..735
                     /locus_tag="VHN20_00170"
                     /inference="COORDINATES: protein motif:HMM:NF024138.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HEX2724213.1"
                     /translation="ERPLAAEQRALEQSLNRLLKESRARLRIAASHDPLLVETLAGRD
                     VELMVTGSEQAIERLLAGDVEVAGCHFGPWAAGDGVPFPPALRDGDYVVRPAFVRDQG
                     LIVAARNPLRIRSVTDLVRRQARFVNRQKGSGTRAWFDRLLAEAKVSAGDIRGYGVEE
                     FTHQAVAAVIASGAADAGLGVKAVAAAFRLGFVPLGSETYYLAMRADLNSALVGEIMT
                     ELHARAKKAVGYGPASGSEARTVQRQ"
     gene            882..2126
                     /locus_tag="VHN20_00175"
     CDS             882..2126
                     /locus_tag="VHN20_00175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724214.1"
                     /translation="MSLVRLAAFVLVLALQAAPARAQAPDDLLRRHAYGGTLARGEAE
                     LASLASQGSQARFALGAAQFARAVERLGQAFYRHGLEAPRTMLVPILRLPVPANPNPQ
                     PLSYDGFRSILAQFADDLRRADATLAQIGPDEVKLTIDVARVRIDFDGDGAGGEHESL
                     VAVLAGIDPRLGASRSRGADMQQLAFPVAFDRGDAAWMRGYANLLAAIAEFWLAHDFE
                     PMFAQSFHLFFPRAGLPYAALLNETRGRAGEMLFTDADLIADAIAFVHLLNWPARDPV
                     RLATALSHLRAVPALSRESWRHILAETDDDNEWIPNPRQTNRFPLPVEQDRIDAWLRT
                     MGQFEEVLEGRKLVPHWRFDKGVNLRRALTEHKTFDLVLWVTGTGLAPFLEDGPVLSS
                     DEWDDITGVLEGNFFGYAVWFN"
     gene            complement(2136..>2458)
                     /locus_tag="VHN20_00180"
     CDS             complement(2136..>2458)
                     /locus_tag="VHN20_00180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011157821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="flavin reductase"
                     /protein_id="HEX2724215.1"
                     /translation="KLTDTVVGIGNTTGAEIDKFTEFALTADDSCEVAAPLIRECHAS
                     FECRLHDDVLVDKYNFFIFEVVKAHVAPSPKHPKTRHYTGDGVFMVAGDIVSRRAQFR
                     PGML"
BASE COUNT          366 a          814 c          871 g          407 t
ORIGIN      
        1 gaacgtccgc tggcggccga gcaacgggct ctcgagcaga gcctgaaccg gctgctcaag
       61 gagtcgcgag cgcggctgcg gatcgcggcg agccatgatc cgctcctggt cgagaccctg
      121 gcggggcgcg acgtggagct gatggtgacc ggcagcgagc aggcgatcga acggctgctc
      181 gccggcgacg tcgaggtcgc gggatgccac ttcggcccgt gggcggccgg cgacggcgtg
      241 ccgtttccgc cggccttgcg cgacggggac tatgtcgtgc gccccgcctt cgtgcgcgat
      301 caagggctga tcgtggccgc caggaacccg ctgcgaatcc gctcggtcac ggatctcgtg
      361 cgaaggcagg cccgcttcgt caaccgccag aaaggatccg ggacgcgtgc gtggttcgac
      421 cgcctgctcg cggaagcgaa ggtcagcgcc ggcgacattc gcggctacgg tgtcgaggag
      481 ttcacgcatc aggccgtcgc ggccgtgatc gcgtccgggg ctgccgacgc cgggctcggc
      541 gtcaaagccg tcgccgccgc gttccgactg ggcttcgtcc ctctcggcag cgagacctat
      601 tacctcgcga tgcgggccga tctgaactcc gcccttgtcg gcgagatcat gaccgaactc
      661 catgcacgcg cgaaaaaggc ggtgggctac gggccggcgt cgggaagcga agcgcgcacc
      721 gtgcagcggc agtgaaccgg gatttggcca agtcggcgcc gcttggagcc ggtgaggaag
      781 tcactcgctg gaacgcagcg ggtgtggcac attcaatgga ccgcggcccg tcgcgccggg
      841 acctcggcct tccttccagc ggcgcgccgg agtggctgcg gatgtctctg gtccgtctcg
      901 cagccttcgt ccttgtcctc gcgcttcaag ccgcgccggc acgcgcgcag gcacccgatg
      961 atctcttgcg caggcatgcc tatggcggga cgctggcgcg cggcgaagcg gagctggcgt
     1021 ccttggccag ccagggcagc caggcccgct tcgcgctcgg cgcggcgcaa ttcgcgcgcg
     1081 ccgtcgagcg gctcgggcag gcgttctacc ggcatggcct ggaagcgcct cggaccatgc
     1141 tcgtgccgat cctgcgcctg cccgtgccgg ccaatccgaa cccgcagccg ctctcctacg
     1201 acggcttccg gtccatcctc gcgcagttcg ccgacgattt gcggcgcgcg gacgcaaccc
     1261 tggcgcagat cggaccggac gaggtcaagc tgacgatcga cgtggcgcgc gtgcggatcg
     1321 atttcgacgg ggacggcgcc ggcggcgagc acgagtcgct tgtcgccgtg ctcgcgggca
     1381 tcgacccgcg cttgggcgcg agccgatccc gcggggccga catgcagcag ctcgcattcc
     1441 cggtcgcgtt cgaccgcggc gacgcggcgt ggatgcgcgg ttacgccaac ctgctcgccg
     1501 cgatcgccga gttctggctg gcgcacgatt tcgagccgat gttcgcgcag agcttccacc
     1561 tgttcttccc gcgtgccggg ctgccttacg cggcgctgct gaacgagacg cgaggaaggg
     1621 ctggcgagat gctgttcacg gacgcggact tgatcgccga tgcgatcgcc ttcgtgcatc
     1681 tgctgaactg gccggcccgc gacccggtgc ggcttgcgac agcgctgtcg catctgcgcg
     1741 cggtgccggc gctcagccgc gagagctggc gccatatcct tgccgagacg gacgacgaca
     1801 acgagtggat tccgaaccct cgccagacga atcgatttcc ccttcctgtc gagcaggacc
     1861 gcatcgacgc ctggctgcgc acgatgggac agttcgagga ggtcctcgag gggcgcaagc
     1921 tcgttccgca ctggcgtttc gacaaaggcg tgaatctcag gcgcgccctc accgagcaca
     1981 agaccttcga cctcgtgctg tgggtcacgg ggaccgggct tgcgccgttc ctggaggacg
     2041 ggcccgtgct gtcgtcggat gaatgggacg acatcacggg cgtgctcgag ggcaacttct
     2101 tcggctacgc ggtctggttc aactgagcct gcgggtcaca acatgccggg ccggaactgc
     2161 gcgcggcggc tgacgatgtc gccggcgacc atgaacacgc cgtcacccgt atagtgccgg
     2221 gtcttggggt gctttggcga cggggcgaca tgcgccttca cgacctcgaa gataaagaaa
     2281 ttgtatttat cgacaagcac gtcgtcgtgc aggcggcatt cgaagctagc gtggcactcg
     2341 cggatcaggg gcgcggcgac ctcgcaggag tcgtcggcag tcagcgcgaa ctcggtgaac
     2401 ttgtcgatct cggcgccggt ggtgttgccg atgccgacca ccgtgtcggt gagctttg
//
LOCUS       DATAIQ010000014         3777 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_277462, whole genome shotgun sequence.
ACCESSION   DATAIQ010000014 DATAIQ010000000
VERSION     DATAIQ010000014.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3777)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3777)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3777
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_277462"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..521)
                     /locus_tag="VHN20_00185"
     CDS             complement(<1..521)
                     /locus_tag="VHN20_00185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015928194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HEX2724216.1"
                     /translation="MTAIPVSITRAAGAGKPVIEDERRVRVDLAALYRLIALNRLDDL
                     FATHISARVPGAHNEFLINPYRLLFAQVTASNLVKVDLDGNIIQDTPHTINPAGFVIH
                     SAIHAARPDANFIIHTHTVAGMAIAALEEGLLPISQKSLRFYNRIGYHDYEGKADNLD
                     ERSRLVQALGKHNA"
     gene            complement(754..1524)
                     /locus_tag="VHN20_00190"
     CDS             complement(754..1524)
                     /locus_tag="VHN20_00190"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEX2724217.1"
                     /translation="MTTTHLDIGAHGIATLSLNRPERGNAFNQAMLDELGQAFLDLQE
                     DARVRVVVLRGNGKHFCTGADIASRGDGKQDGLSFNEVLSRIDRFRKPSIAIVQGGCV
                     GGGLGIAACCDVLLAEETAFFSVPELRVGITPSAELSGLLIRAMGYRAFRRYGLSGER
                     ISAQDALRIGLAHQVVAPGTTDDEVGRIADAFLQNAPGAQAELKASIADLAWPRPDVL
                     FPPGGPKRRDHARSAEAEEGIAAFREKRKPSWYPKPGG"
     gene            complement(1528..3735)
                     /locus_tag="VHN20_00195"
     CDS             complement(1528..3735)
                     /locus_tag="VHN20_00195"
                     /inference="COORDINATES: protein motif:HMM:NF024938.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase family protein"
                     /protein_id="HEX2724218.1"
                     /translation="MNRSLRGPEGVRALLSPNNVVIAGASDRAGSWSKRVLRSLERMG
                     FPGQIYPLNPRNPTVWDGRTCYPDFASLPEPPDHVVVLVPGRAAIDTIRDAGRAGARS
                     ATIFSSGFGEGGDPEGLALGAELQAAIAESGLAVSGPNCLGNLAARHKLMTLTDDRIQ
                     QLSRGPVAIFGQSGGIVTAIYRSLLNRGIQPGYAVTVGNEAGLNSADYIRYFAEDVDI
                     KVIACFVEAIKDPAAFREACAAARDAGKPVVLVKIGGSDASRAAALAHTGSLAGSLAC
                     FDAVAETIGAIRVDTIDEMVEVVELLTHGHRPTGARVGSITFSGGLKGLLLEAAERNG
                     VEFPALAPRTLDRLREVLGIGTSLGNPLDAGFTALSSREAYFTCIEIMQEDPGLDLLL
                     VQEELPTAEGMNAKAGNLVTVDEMVGRPGAKPVGVVSMASYMYTDFTREFRGRFPRLP
                     VLHEVDKALKAVRAVGRWSVTRARTDEPGAIAAVSPGKAQLRSILDKATATGDGRRVL
                     GEGSSKALIASYGIGAPREIFAQSADEAARAAQDIGYPVVLKLVSPDVQHKTEVGGVV
                     TDLGDAQAVLAAFDRIRANLEAADPAAVFDGVLVAEQAQKGIELVLGVQRDPEVGPVV
                     MFGTGGVHLELQKDVAFGAVPLSEARARRMIDATVAGRLLRGYRGAPPSDVDAVVAAL
                     LGLSRLAADLGERLESVDLNPVVAVPGKAGVLSLDALVVLREPRDATSSRNAA"
BASE COUNT          611 a         1284 c         1294 g          588 t
ORIGIN      
        1 gcgttgtgct tgccgagcgc ctgcacgagc cgcgaacgct cgtcgagatt gtcggccttc
       61 ccttcatagt cgtgatagcc gatgcggttg tagaaacgca gcgacttctg ggagatcggc
      121 agcaagccct cctcgagggc ggcgatcgcc ataccagcaa ccgtgtgggt atggatgatg
      181 aaattcgcat ccggccgcgc cgcatggatc gccgaatgga tgacgaagcc cgccgggttg
      241 atcgtgtgcg gcgtgtcctg gatgatgttc ccgtcgagat cgaccttgac gaggttcgat
      301 gccgtcactt gcgcgaacag cagccgatac gggttgatca ggaactcgtt atgcgcgccg
      361 ggcacgcggg cggaaatgtg ggtggcgaac agatcgtcca gcctattgag ggcgatcagc
      421 cgatagaggg ccgcaaggtc gacgcgaacg cgccgctcgt cctcgatgac cggcttgccg
      481 gcgcctgccg cacgcgtgat cgaaacaggt atcgcggtca ttgctcggcc ctccgttccc
      541 agtcgtccgt tgtcatggcc gggcttggtg tcccttcagt gcccggacat cgcccccggg
      601 tccggcttcg ccggcccgag gataaactcc gcgctgatcc gggtacggcc atcccgatca
      661 gaggggcggc gctcttccga tcgggatcac cggcacgagg ccggtgatga caatgggaag
      721 tggcagttcc gaagggcgca acggctcgca cgatcatccg ccaggcttcg gataccacga
      781 gggcttgcgc ttctcgcgaa aggcggcgat gccttcttcg gcttccgccg aacgggcgtg
      841 gtcgcggcgt ttcggcccac cgggcgggaa cagaacgtcc gggcgcggcc aggcaagatc
      901 cgcgatcgac gctttcaact ccgcctgcgc accgggcgcg ttctgcagga aggcgtcggc
      961 gatcctgccg acctcgtcgt ccgtcgttcc gggcgcgacg acctgatggg caagcccgat
     1021 ccgcagcgcg tcctgcgcgg atatccgctc gcccgagagc ccatagcggc ggaacgcgcg
     1081 atagcccatg gcgcggatca gcagcccgga cagctcggcg gacggcgtga tgccgacgcg
     1141 cagctccggg acggagaaga acgcggtctc ctcggccagg aggacgtcgc agcaggcggc
     1201 gatgccgagc ccgccgccga cgcatccccc ctgcacgatt gcgatcgacg gcttgcgaaa
     1261 acggtcgatg cgcgagagca cctcgttgaa gctgaggccg tcttgcttgc cgtcgccgcg
     1321 ggacgcgatg tcggcgccgg tgcaaaaatg cttgccgttg ccgcgcagga cgaccacgcg
     1381 cacgcgcgca tcctcctgaa ggtccaggaa ggcttggccc aattcgtcga gcatcgcctg
     1441 attgaaggca ttgccgcgct ccggccggtt caaactcaga gtcgcgatcc cgtgcgcgcc
     1501 gatgtccaga tgagtggtcg tcatggtcta tgccgcgttt ctcgaggacg tcgcgtctcg
     1561 cggttcccgc aagacgacca gcgcgtcgag cgacaggacg ccggccttgc cggggacggc
     1621 gacgacaggg ttgaggtcga cgctctcgag gcgttcgcca aggtccgccg caaggcggga
     1681 cagcccgagc aacgccgcga cgacggcgtc cacgtcggac ggcggggcgc cgcgataacc
     1741 gcggagcaga cgcccggcga ccgtcgcatc gatcatgcgg cgcgcgcgcg cctcgctgag
     1801 gggaacggcc ccgaaggcga cgtccttctg caactcgaga tgcacgccgc cggtgccgaa
     1861 catgacgacc ggcccgacct cggggtcgcg ctgcacgccg agcacgagct cgatgccttt
     1921 ttgcgcctgc tcggcgacga gcacgccgtc gaacaccgcc gccggatcgg ctgcttcgag
     1981 attcgccctg atgcggtcga aggccgcgag caccgcctgc gcgtcgccga gatcggtgac
     2041 gacgccgccc acctcggtct tgtgctggac gtcgggcgaa acgagcttca gcacgaccgg
     2101 atagccgatg tcctgcgccg cccgcgcggc ttcgtcggcg ctttgcgcaa agatttcgcg
     2161 gggcgcgccg atcccgtagc tcgcgatgag ggccttggag ctcccctccc ctagcacacg
     2221 gcggccgtcg ccggtcgccg tcgccttgtc gaggatcgac cggagctgcg ccttgccggg
     2281 actcacggcc gcgatcgcgc cgggttcgtc cgtgcgcgcc cgggtcacgc tccacctgcc
     2341 gaccgcacgc accgccttca acgccttgtc gacctcgtga aggaccggca ggcgcggaaa
     2401 cctgccgcgg aattcgcgcg tgaaatccgt gtacatatac gacgccatgg agacgacgcc
     2461 gaccggcttc gcgcccggcc gtccgaccat ctcgtcgacc gtgacgagat tgccggcctt
     2521 ggcgttcatg ccctccgcgg tcggcagctc ctcctgcacc aggagcaggt cgaggccggg
     2581 gtcctcctgc atgatctcga tgcaggtgaa atacgcctcg cggctgctca gggcggtgaa
     2641 gccggcatcg agcggattgc cgagcgacgt gccgatgccc aagacctcgc gcagccgatc
     2701 gagcgtgcgc ggcgcaagcg ccggaaattc gacgccgttg cgctcggccg cttcgagcaa
     2761 caaccccttg aggccccccg agaacgtgat ggaaccgacc cgtgcacccg tcggccggtg
     2821 gccatgggtg agcagctcca ccacctcgac catctcgtcg atcgtgtcga cgcggatggc
     2881 gccgatcgtc tcggcgacgg catcgaagca tgcgagcgag ccggcgagcg agccggtatg
     2941 cgccagggcc gcggccctgc tcgcgtccga accgccgatc ttcacgagca cgacaggctt
     3001 gcccgcgtcg cgcgcggccg cgcaggcctc gcggaatgca gccggatcct tgatcgcctc
     3061 gacgaagcag gcgatgacct tgatgtccac gtcttcggcg aagtagcgga tgtaatcggc
     3121 ggagttcagc cccgcctcgt tgccgaccgt cacggcgtag cccggctgaa tgccgcgatt
     3181 caggagcgag cggtagatgg cggtgacgat cccgccgctc tgcccgaaaa tggcgaccgg
     3241 cccgcgcgac agttgctgga tgcggtcgtc ggtcagggtc atcaacttgt ggcgcgcggc
     3301 caagttgccg aggcagttgg ggccggacac ggccagcccg gattcggcga tggcggcttg
     3361 cagctcggca ccgagcgcca gcccctcagg atcgccgcct tcgccgaagc cgctcgagaa
     3421 gatcgtggcg ctccgggcgc ccgcgcggcc cgcgtcgcgg atcgtgtcga tggccgcgcg
     3481 ccccggcacc aggacgacga cgtggtcggg cggctcggga agcgaggcga aatcgggata
     3541 gcatgtccgt ccgtcccaga cggtcgggtt gcgcggattg agcggataga tctgcccggg
     3601 aaagcccatc cgctcgagcg aacggaggac gcgcttcgac cagctgccgg cgcgatcgct
     3661 ggcgccggcg atgaccacgt tgttcggtga aagcaaggcg cggacgcctt ccgggccgcg
     3721 aagggatcga ttcattcaat ggcctttccg actccgcgca cgaccgtcac gacggac
//
LOCUS       DATAIQ010000015         2700 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_369835, whole genome shotgun sequence.
ACCESSION   DATAIQ010000015 DATAIQ010000000
VERSION     DATAIQ010000015.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2700)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2700)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2700
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_369835"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..702)
                     /locus_tag="VHN20_00200"
     CDS             complement(<1..702)
                     /locus_tag="VHN20_00200"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX2724219.1"
                     /translation="MKVRTLVCLVLCWCAALAPAAAEERLVVEETFLSVDIAGQQYKL
                     EALVAKEAGAGGRRPVALITHGQAAEAERRERVNARGWLRTAREFARRGWLAVVVVRR
                     GFGRSGGKQPHALRGCRNGEYAPVLDDQANDLEAALKAVARRPDADVGQVVALGVSVG
                     GATVLNLAARNPPGLRAVINVSGGVRSVPREDGPPVTCKPEDLTPVFASFGERMRVPS
                     LWLYAENDSFFPGDYV"
     gene            873..1052
                     /locus_tag="VHN20_00205"
     CDS             873..1052
                     /locus_tag="VHN20_00205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020180785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724220.1"
                     /translation="MSDLDVTADRPWTLEAVQELRSLAREGVSVSVISLKLKRSLASV
                     EAKLLDLGITPKSHD"
     gene            1240..1716
                     /locus_tag="VHN20_00210"
     CDS             1240..1716
                     /locus_tag="VHN20_00210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015929966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaK/EbsC family protein"
                     /protein_id="HEX2724221.1"
                     /translation="MTIAPTLQRYLANKNIAYDLVPHQPTMSSLRTAEACHITGDCLA
                     KGVVLRDSGGYWLAVLPASRQVQLASLRADLGDDVDLASEQEIEQVFRDCDRGAIPPV
                     GACYGLDVIVDDSLGRQPEVYFEGGDHATLVHLTQAEFARLNPSARHGSFAGAQTH"
     gene            1913..2434
                     /locus_tag="VHN20_00215"
     CDS             1913..2434
                     /locus_tag="VHN20_00215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724222.1"
                     /translation="MTTSMRALMAALALTVCGLFPAAAQTGALFQPADRDMIARYRPS
                     MEAVTRCNQAAKALAAAASKDARLKAEIDAEDDQDEPDNATMAQTIQNIEKRAPIATT
                     MLARSGCPVRDYFLIASQSALAKMAASPELAKVMGESNFLPPETIAFWQKNGTAAERL
                     LDEASKLLEFGRQ"
BASE COUNT          447 a          964 c          903 g          386 t
ORIGIN      
        1 gacatagtcg ccgggaaaga acgaatcgtt ctcggcgtag agccacaggc tcgggacgcg
       61 catgcgctcg ccgaagcttg cgaagaccgg cgtcagatct tccggcttgc acgtgaccgg
      121 cggcccgtcc tcgcgcggca cgctcctgac cccgccggac acgttgatga ccgcgcgcag
      181 ccccggtggg tttcgcgccg ccagattgag gacggtggcg ccgccgaccg agacgccgag
      241 cgcgacgacc tggccgacgt cggcgtccgg gcggcgcgcg accgccttca gggcggcctc
      301 aaggtcattc gcctggtcgt cgaggaccgg cgcatattca ccgttgcggc agcctcgcaa
      361 ggcgtgcggc tgcttgcccc ccgagcggcc gaagccgcgc cgcacgacca ccaccgcgag
      421 ccagccgcgg cgtgcgaatt cgcgcgcggt gcgcagccag ccgcgggcat tcacccgctc
      481 gcggcgctcg gcttcggcag cctggccatg ggtgatcagg gcaaccggcc tgcggccgcc
      541 ggcgccggct tccttggcga ccagcgcctc gagcttgtac tgctggcccg cgatgtccac
      601 gctgaggaac gtttcctcga cgacgaggcg ttcttcggcc gccgcgggcg ccaaggcagc
      661 gcaccagcac aagacgagac agacgagcgt cctgaccttc acggcccctc ccccggcggc
      721 gttctgactt tggcacgcgc gcctgcgcgg accaagcccg cgccgcctgt cgtcgacgcg
      781 ccattgcacg aacggaacat gaccgtgggc ggcacgttcc cattattgcc cactcgcgag
      841 gcatcgtcgg gcagcatcaa agggaggtgg ccatgagcga tctcgacgtg acagccgatc
      901 ggccctggac gctcgaagcc gtgcaggagc tccgttccct ggcgcgcgaa ggcgtgtccg
      961 tgtcggtgat cagcctgaag ctgaagcgct cgctggcgag cgtcgaggcc aagcttctcg
     1021 atctcggcat cacgccgaaa tcgcacgact gagcgctctc ggcaggcgca ggcggcggac
     1081 ccgtcatcgt cgatggacgg ctgccgaccg ccgcactgaa gcgttgtcgc cgacacccgc
     1141 gcggcataaa atcacgtcat tgccaagcag ccgcgcgtcc cgaggcgacg gcttccggac
     1201 ggtgtcgcgg cgcgaggccc tcgcgcccag gaggccgtca tgacgattgc gcccacgctt
     1261 cagcgatatc tcgcaaacaa aaacatcgcc tacgacctcg tgccgcacca gccgacaatg
     1321 tcgtcgctgc gcaccgccga agcctgccac atcaccggcg actgcctcgc caaaggcgtc
     1381 gtgctgcgcg acagcggcgg ctattggctg gcggtgctgc cggcgtcgcg gcaggtgcag
     1441 ctcgcaagcc tgcgcgccga tctcggcgac gacgtcgatc tcgccagcga gcaggagatc
     1501 gagcaggtgt tccgcgactg cgaccgcggc gccatcccgc cggtgggcgc ctgctacggc
     1561 ctcgacgtga tcgtcgacga cagcctcggc cgacagcccg aggtctattt cgaaggcggc
     1621 gaccacgcca cgctggtgca cctgacccag gccgagttcg cccgcctcaa tccgagcgcg
     1681 cggcacggat catttgccgg cgcgcagacc cattgagccg gcaagggagg cgaagaggct
     1741 tcgtcggtgc gccgcgctcg acgcgctcgc gcggacgcga aatcgaggcc gcgcaacgct
     1801 cggccagcct atgatggcgg agcgcgtggt cgcgccggca cgatccgcta tccggcattg
     1861 acaccccggt atgctccccg gataagcgcg cgaccctcga ccggagcaac ctgtgacgac
     1921 ctcgatgcgg gccttgatgg ccgcccttgc gctaaccgtg tgcggccttt ttccggccgc
     1981 cgcccagacc ggcgcgctct ttcagcctgc cgaccgcgac atgatcgcga gataccggcc
     2041 gtcgatggaa gcggtcacgc gctgcaacca ggcagcaaag gcgcttgcgg ctgcggccag
     2101 caaggacgcg cggctgaagg ccgagatcga cgccgaggat gaccaggacg agcccgacaa
     2161 cgccaccatg gcgcagacga tccagaacat cgagaagcgc gcgccgatcg cgaccaccat
     2221 gctggcgcgc agcggctgcc cggtccgcga ctattttctg atcgcctcgc aaagcgcgct
     2281 ggccaagatg gccgcctcgc cggagctcgc caaggtcatg ggcgagagca acttcctgcc
     2341 gcccgagacg atcgccttct ggcagaagaa cggtacggcg gccgagcgtc tcctcgatga
     2401 agccagcaag ctgctcgaat tcggcaggca gtagagacac cgcgccgtag cggcgcatgg
     2461 cagtccgctg gtgacccgtt caggctatga ggaccgttac gctgtcatcg cccggccctg
     2521 acaaggcgga cgcgtccgtt cagtcgcgga tgtcctgcag gaaccagtcg gtcgggatct
     2581 cgcggccgag gccccgcctg accgcctcgc tgtagaccca gccgccgacg gcggagaact
     2641 gcaggccctg gttgccgacg ttgcggtaga aggtgatctg gtcgcggctc gtgcggccct
//
LOCUS       DATAIQ010000016         6346 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_323385, whole genome shotgun sequence.
ACCESSION   DATAIQ010000016 DATAIQ010000000
VERSION     DATAIQ010000016.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 6346)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6346)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6346
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_323385"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            78..1055
                     /locus_tag="VHN20_00220"
     CDS             78..1055
                     /locus_tag="VHN20_00220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011664254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding protein"
                     /protein_id="HEX2724223.1"
                     /translation="MNGSLPRRMWLGACALLLSVTAVANGGFAQARKIEVVATTAMIG
                     DAVKAVGGRRLNVEVLLGQGVDPHLYKPTRADIAKMARADIIFANGLSLEAQFRDTFE
                     QLARTKRVVLAGEKLPKDKILADADYKDKPDPHVWMDAELWKGVIGAVRDALSAHDPA
                     GKQAYDQGHDGYVGDVGRLSDYVKRVLASIPKDKRILLTAHDAFNYFSRAYDIEVIGI
                     QGVSTESEAGLKKIEEVVDLVVSRKLPSIFVESSVSDRNVQAVIEGAARRGHKLTIGA
                     ELFSDAMGPPGSYEGTYVGMIDHNATTITRALGGEAPQRGLNGRLGTGA"
     gene            1104..1838
                     /locus_tag="VHN20_00225"
     CDS             1104..1838
                     /locus_tag="VHN20_00225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter ATP-binding protein"
                     /protein_id="HEX2724224.1"
                     /translation="MATSAASPRLDVEGLSVAYDGRLAIENVTWRPPQSGLVAIVGPN
                     GAGKSTLLKAILGLVPAATGSVFVGGQPLEKARQHLAYVPQRAAVDWDFPATALDVVL
                     QGMIRSVGWFRPFGKHHRVQARALLAEVGMGDFADRQIGALSGGQQQRVFLARGLARH
                     AEILLFDEPLSGVDAASERIILDVFDALNAQGRLVICVHHDLGTVADRFDHVLILNRR
                     VIAAGPVAQAFTPAAVAQAYGVPLAL"
     gene            1848..2765
                     /locus_tag="VHN20_00230"
     CDS             1848..2765
                     /locus_tag="VHN20_00230"
                     /inference="COORDINATES: protein motif:HMM:NF013143.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HEX2724225.1"
                     /translation="MDGLLRILLLQGGHNTIIVMLGAAALGVAAGAVGVFAMLRRRAL
                     VSDAVAHATLPGVAGAFIVAATVGLPGRSPLILMAGAAVTAVVGLIAVQLLARQPRVT
                     EDTATAAVLASTFGLGVALLSIVQSLSTGGQAGLDAYLFGGTAGMLEREAYVMGALAL
                     AVVMVLLLVFKELSAAAFDPAFATASGLPLARLDGIVALLSLATVVVGLRVVGLVLVV
                     ALLIIPPAAARFWSDRIGVVVAVSSLIGAASAYTGAAISAYAPDVPTGATIVVVCAVL
                     FAASLGFGAARGVVVRAVGVRRPLADEAR"
     gene            2762..3703
                     /locus_tag="VHN20_00235"
     CDS             2762..3703
                     /locus_tag="VHN20_00235"
                     /inference="COORDINATES: protein motif:HMM:NF013143.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HEX2724226.1"
                     /translation="MITFLQIDFAALLAATLAALSCALVGNFLVLTRRAMVSDALSHV
                     MLPGVLVAFLITGSSAVLPMLAGGVGVGLLAVALVSFLIRTAKVEASAALGVVFTSFF
                     AGGVLLMEQSGVARTAFDVHHVITGNLEALVWPTAKGLASLVTPSDLAEMPRAIGRLA
                     VILVLVAAIVLSFRKELAAIAFDPDFARASGLPVARLDLVLLVATALATVAAFESVGV
                     VLAVAMIVCPAATARMLTDRLGPQIALSVVVALAVVWGGYALAVLGPPALGFDIALNA
                     AGTIGALSGLLFVAAVLYRRWSRSARRGGMAEALSSR"
     gene            complement(3690..3959)
                     /locus_tag="VHN20_00240"
     CDS             complement(3690..3959)
                     /locus_tag="VHN20_00240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724227.1"
                     /translation="MRALVLAGLMAALAGPAAAQVERLPQRSRAERQVEDSNRAITRQ
                     QQILRDNQQTQFEINQLRGEIQRSQQFPQMIGPGTMGCAPGSIGC"
     gene            4103..>6346
                     /locus_tag="VHN20_00245"
     CDS             4103..>6346
                     /locus_tag="VHN20_00245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019905796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HEX2724228.1"
                     /translation="MNRPLPAGDPPPFDDLAHQPRAGSLSERARAAVAPATGYLTGLN
                     PEQRQAVEATEGPVLVLAGAGTGKTRVLTTRIGHLIATGKARPFDLLAVTFTNKAARE
                     MKERVAALVGPVAEGMPWLGTFHSIGTKILRRHAELVGLKSDFTILDTDDQQRLLKQV
                     IQADNVDEKRWPARQLASFIDSWKNRGLTPEAVPAGEGSAFANGRGARLYAAYQDRLR
                     TLNAADFGDLLLHCLTIWRAHPDVLQQYQSRFRYMLVDEYQDTNVAQYLWLRLLAQSR
                     RNLCCVGDDDQSIYGWRGAEVDNILRFEHDFPGATVIRLERNYRSTAHILAAASGLIA
                     KNEGRLGKTLRTEDVPGEKVTITGAWDSEDEARLIGEEIEALHTKKHPLSEIAVLVRV
                     SAQMREIEDRFVQLGLPYRVIGGPRFYERAEIRDALAYLRATANSANDLAFERIVNVP
                     KRGLGDATIQVLHNHARAAKVSLMEAARFVVETDELKSKPRGALRDLVACFTRWSERI
                     DNTPHHELAQVILEESGYTDMWQKERSADAAGRLENLKELVRSMEEFPDLASFLEHVA
                     LVMEANESDTSDRVSLMTLHAAKGLEFDTVFLPGWEEGLFPNQRALDESGRAGLEEER
                     RLAHVGLTRARRKAKIFFASNRRLHGLWNATVASRFIDDLPEAHVEVTEAPAAFAHSG
                     YGGSRFDRVQPFGASSYATPGWQRAQANRAAMGNDDGFSRGRFADDGGYRSSFSRGGR
                     GPQRSPLL"
BASE COUNT          900 a         2292 c         2101 g         1053 t
ORIGIN      
        1 caccgggcaa ctggatggcc acgttttgtt gcacatgatt tgcaattcca gctgagcaat
       61 ggactgcgag gtcggcgatg aatggctcgc tcccacggcg aatgtggctc ggcgcatgcg
      121 cgctgctgct gtcggtgacg gcggttgcta acggcggttt cgcgcaggcc cgcaagatcg
      181 aggtcgtcgc cacgacggcc atgatcggtg acgccgtgaa ggcggtcggc gggagacgcc
      241 tcaacgtcga ggtgctgctc ggccagggcg tcgaccctca cctctacaag ccgacgcgcg
      301 cggacattgc caagatggcg agggccgaca tcatcttcgc caacggcctc agtctcgagg
      361 cgcaattccg ggatacgttc gagcagctcg cccgcacgaa gcgcgtggtg ctcgcgggcg
      421 agaagctgcc gaaggacaag atcctcgccg atgcggacta caaggataag cccgaccccc
      481 atgtgtggat ggacgcggag ctgtggaaag gcgtgatcgg cgccgtcagg gatgcgctct
      541 ccgcccacga tcctgccggc aagcaggcct acgaccaggg ccacgacggc tatgtgggcg
      601 acgtcgggcg cctgtcggac tacgtcaagc gggtgctcgc cagcattccc aaggacaagc
      661 gcatcctgct caccgcgcat gacgcgttca actatttctc gcgcgcctac gacatcgagg
      721 tgatcggcat ccagggcgtc tcgacggaaa gcgaggccgg cctcaagaag atcgaagagg
      781 tcgtcgacct ggtcgtaagc cggaagctgc cctccatctt cgtcgaaagc tcggtctcgg
      841 accgcaacgt ccaggccgtc attgaaggcg cggcgcggcg cggccacaag ctgaccatcg
      901 gggcggaact gttctccgac gccatgggcc cgcccggcag ctacgagggc acctacgtcg
      961 gcatgatcga ccacaacgcc accacgatca cgcgcgccct cggcggggag gccccgcagc
     1021 gcggcctcaa cgggcggctc ggcaccggcg cctgaggggc cgtgatgctt gccctgccgg
     1081 aacgattggc gagacagccc gacatggcaa caagcgcggc ttcgccgcgt ctcgacgtcg
     1141 aaggactctc cgtcgcctac gatggccgcc tggcgatcga aaacgtgacg tggcggccgc
     1201 cgcagtcggg gctcgtcgcc atcgtcgggc cgaacggcgc tggcaagtcg accttgctga
     1261 aggcaatcct cggcctcgtc cccgccgcga cgggctccgt ctttgtcggc ggccagccct
     1321 tggagaaagc caggcagcat cttgcctacg tcccccagcg ggctgccgtc gactgggatt
     1381 ttccggcgac ggccctcgat gtggtgctgc agggcatgat caggtccgtc ggctggttcc
     1441 gcccgttcgg gaagcaccat cgggtgcagg cgcgcgccct ccttgccgag gtcggcatgg
     1501 gcgattttgc cgaccgtcag atcggcgcct tatccggggg acagcaacag cgcgtgttcc
     1561 ttgcgcgcgg cctcgcgcgg cacgcagaga tcctcctctt cgacgagcct ctgtcagggg
     1621 tcgatgcggc gtccgagcgg attatcctcg atgtcttcga tgcgctcaat gcgcaagggc
     1681 gcctcgtgat ctgcgtgcat catgacctcg gcacagtcgc cgaccgcttc gatcatgtcc
     1741 tcatcctgaa tcggcgcgtg atcgccgccg gtcccgtcgc acaagccttc acgcctgccg
     1801 ccgtggcgca ggcctacggc gtgccgctgg cgctttagga gcccgtcatg gacgggctct
     1861 tgcgcatcct tctgctgcag ggcggccaca acaccatcat cgtcatgctc ggcgccgccg
     1921 ccctcggcgt cgccgccggc gcggtcggcg tcttcgccat gctgcgccgc cgggcgctcg
     1981 tctccgatgc cgtcgcgcac gccaccctgc ccggggtcgc cggcgcgttt atcgtggccg
     2041 ccacagtcgg gctgccgggg cgctcgccgc tcatcctgat ggcaggggcc gccgtcaccg
     2101 ccgtcgtcgg cctgatcgcc gttcaactcc tcgcccgcca gccccgcgtg accgaagata
     2161 ccgcgaccgc cgctgtgctc gcctcgacgt tcggcctcgg cgttgccctc ctgtcgatcg
     2221 tccagagcct gagcaccggg ggccaggcag gcctcgacgc ctatctgttc ggcggcactg
     2281 ccgggatgct cgagcgcgaa gcctacgtga tgggagcgct ggcgcttgcg gtcgtgatgg
     2341 tgctgctgct cgtcttcaag gaattgtcgg cggccgcctt cgatccggct ttcgcgacgg
     2401 cctcgggcct gccgctcgcc cggctcgacg gcatcgtggc tctgctctcg ctcgcgaccg
     2461 tggtcgtcgg gctgcgcgtc gtcggcctcg tgctcgtggt ggcgctgctc atcatcccgc
     2521 cggcggcggc gcgcttctgg agcgaccgca tcggcgtcgt ggtcgcggtc tcgtcgctga
     2581 tcggcgccgc gagcgcctat accggggcgg cgatctccgc ttacgcgcca gacgtgccga
     2641 ccggggcgac gatcgtcgtc gtatgcgccg tcctgttcgc cgccagcctt ggcttcggcg
     2701 ccgcccgcgg ggtcgtcgtc cgggcggtcg gcgtgcgccg tccgctcgcg gatgaggcgc
     2761 gatgatcacg ttcctgcaga tcgattttgc ggcgctcctc gccgccaccc tggcggccct
     2821 gtcttgcgcc cttgtcggca actttctcgt cctcacccgg cgcgccatgg tcagcgacgc
     2881 cttgagccac gtgatgctgc ccggcgttct cgtcgctttc ctgatcaccg gttcgagcgc
     2941 ggtgctgccg atgctggccg gcggcgtggg cgtgggcctc ctcgctgtgg cgctcgtgtc
     3001 gttcctgatc cgcaccgcca aggtcgaagc gtcggcggct ttgggcgtcg tgttcaccag
     3061 cttctttgcg ggcggcgtgc tgctgatgga gcaatcgggc gtcgcgcgca ccgccttcga
     3121 tgtgcatcac gtgatcaccg gaaacctcga ggcgctcgtc tggccgacgg cgaaaggcct
     3181 cgccagcctc gtcacgccct ccgaccttgc cgagatgccg cgcgcgatcg ggcggctggc
     3241 cgtgatcctg gtcctcgtgg cggcgatcgt gctgtccttc cgcaaggaac ttgccgcgat
     3301 cgccttcgat cccgatttcg cgcgcgcctc gggcctgccc gtcgctcggc tcgatctcgt
     3361 cctcctcgtc gccacggcgc tggccaccgt cgccgccttt gaatccgtag gggtcgtgct
     3421 ggcggtcgcg atgatcgttt gcccggccgc caccgcgcgc atgctcaccg accgcctcgg
     3481 cccgcagatc gcgctgtcgg tggtggtggc gctggcggtc gtgtggggcg gctacgcgct
     3541 tgccgttctc ggcccccctg ccctcggctt cgacatcgcc ctcaacgcgg ccggcacgat
     3601 cggcgccctc tcgggcctgc tgttcgtcgc ggccgtgctc taccggagat ggtcgcgatc
     3661 ggctcgccgc ggcggcatgg ccgaggcgct cagcagccga tagagccggg cgcgcagccc
     3721 atcgtgccgg ggccgatcat ctgcgggaat tgctggctgc gctgaatttc gccgcgcagc
     3781 tggttgatct cgaactgggt ctgctggttg tcgcgcagga tctgctgctg gcgcgtgatc
     3841 gcgcggttgc tgtcctcgac ctgccgctcg gcccggctgc gctgcggcag ccgctcgacc
     3901 tgggccgcgg ccgggccggc aagcgcagcc atcagtcctg ccaatacaag ggcgcgcatg
     3961 tcgccgcctc cttcccgcca atctccatct tatatgggga acacccaccc ccgagtggca
     4021 cgattcgtcc tgcgacatgt gaggcgtgga cagagccgcg ccgccctcga cggcgttcgc
     4081 cttttggtcc atggatagat tgatgaatcg accgctgccg gccggcgatc cgccgccttt
     4141 cgacgacctc gcgcaccagc cccgcgccgg gagcttgagc gagcgggcgc gcgccgcggt
     4201 ggcgccagcc accggctatc tgacgggcct caatcccgag cagcggcagg cggtcgaggc
     4261 gaccgagggg cctgtcctcg tgctcgccgg cgccggcacc ggcaagacgc gcgtgctgac
     4321 gacgcgcatc ggccatctga tcgccaccgg caaggcacgg cccttcgacc tcctcgccgt
     4381 caccttcacc aacaaggcag cgcgcgagat gaaggagcgc gtcgccgccc tggtcgggcc
     4441 ggtcgccgaa ggcatgccct ggctcggcac cttccactcc atcggcacca agatcctgcg
     4501 ccgtcacgcc gagctcgtcg ggctcaaatc cgacttcacg atcctcgaca cggacgacca
     4561 gcagcgcctg ctcaagcagg tgatccaggc tgacaatgtc gacgaaaagc gctggccggc
     4621 ccgccagctc gcctcgttca tcgacagttg gaagaaccgc ggcctgaccc cggaggccgt
     4681 tccggccggc gaaggcagcg ccttcgccaa cggccgcggc gccaggctct acgccgccta
     4741 ccaggaccgg ctcaggacgc tcaacgccgc cgatttcggc gacctgctgc tgcattgcct
     4801 gacgatctgg cgcgcccatc cggacgtact gcagcaatac cagagccgct tccgctacat
     4861 gctggtggac gaataccagg acaccaacgt cgcccagtat ttgtggctgc ggctgctcgc
     4921 ccagagccgc cgcaacctgt gctgcgtcgg cgacgacgac cagtcgatct acggctggcg
     4981 cggcgccgag gtcgacaaca tcctgcgttt cgagcacgac tttcccggcg ccacggtgat
     5041 ccgcctcgag cgcaactacc gctccaccgc ccatatcctg gccgccgcct cgggcctgat
     5101 cgccaagaac gagggccgcc tcggcaagac cctgcgaacc gaggacgtgc ccggcgagaa
     5161 ggtcaccatc accggggcgt gggactcgga ggacgaggcg cgcctgatcg gcgaggagat
     5221 cgaggcgctg cacacgaaga agcacccctt gtccgagatc gccgtgctgg tgcgcgtctc
     5281 cgcccagatg cgcgagatcg aagaccgctt cgtgcagctc ggcctcccgt accgggtcat
     5341 cggcggcccg cgcttctacg agcgcgccga gatccgcgac gccctcgcct acctgcgcgc
     5401 caccgccaac agcgccaacg acctcgcctt cgagcgcatc gtcaacgtgc ccaagcgggg
     5461 cctcggcgac gccaccatcc aggtgctgca caaccacgcc cgcgccgcca aggtgtcgct
     5521 gatggaagcg gcccggttcg tggtcgagac ggacgagctc aagtcgaagc cgcgcggcgc
     5581 cctgcgcgac ctcgtcgcct gcttcacgcg ctggtcggag cggatcgaca acacgccgca
     5641 tcacgagctg gcgcaggtca tcctcgagga gtcgggctat accgacatgt ggcagaagga
     5701 gcgctcggcc gacgcggccg gacgtctcga gaacctcaag gagctggtgc gctccatgga
     5761 ggaattcccg gacctcgcca gcttcctcga gcacgtggcg ctcgtgatgg aggccaacga
     5821 gagcgacacc agcgaccgcg tcagcctgat gaccctgcac gccgccaagg gcctcgaatt
     5881 cgacaccgtg ttcctgcccg gctgggagga aggcctgttc cccaaccagc gcgccctcga
     5941 cgagagcggc cgcgccggcc tcgaggagga gcgccgcctc gcccatgtcg gcctgacgcg
     6001 cgcgcgccgc aaggccaaga tctttttcgc ctcgaaccgg cgcctgcacg ggctgtggaa
     6061 cgcgaccgtg gcgagccgct tcatcgacga cctgcccgag gcgcatgtgg aggtcaccga
     6121 agctccggcg gcgttcgccc atagcggcta tggcggctcg cgcttcgacc gcgtgcagcc
     6181 gttcggcgcc tcgtcctatg cgacgcccgg ctggcagcgc gcccaggcga accgcgcggc
     6241 catgggcaac gacgacggct tttcccgcgg tcgcttcgcc gatgacggcg gctaccgcag
     6301 cagcttctcc cgcggcggtc gcggcccgca gcgcagcccg ctcctg
//
LOCUS       DATAIQ010000017         1854 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_369877, whole genome shotgun sequence.
ACCESSION   DATAIQ010000017 DATAIQ010000000
VERSION     DATAIQ010000017.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1854)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1854)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1854
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_369877"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..399
                     /locus_tag="VHN20_00250"
     CDS             <1..399
                     /locus_tag="VHN20_00250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019964284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HEX2724229.1"
                     /translation="LTALAERLPRLANATLRVTEWQGEVVFLHEVVPGAADRSYGLQV
                     ARLAGLPPAVIDRAKTILSELERVDRERPTRTLIDDLPLFAAPARTATPPAPPRDALR
                     DALDAIDPDDLTPKQALETLYRLKAARGGA"
     gene            554..922
                     /locus_tag="VHN20_00255"
     CDS             554..922
                     /locus_tag="VHN20_00255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724230.1"
                     /translation="MNGILVLPTRFVCGLLLACLAFAAHSDRAELHGFRTFAVGFQQA
                     GLHHGKNSPLALTSAAIVDEDDPDRSQNDYPDVSLAARPFVLLPGPVHSPIERGRVLA
                     LIRHGPCAAPQTGPPDLHAA"
     gene            946..1221
                     /locus_tag="VHN20_00260"
     CDS             946..1221
                     /locus_tag="VHN20_00260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724231.1"
                     /translation="MANLVRHPLRGVIMMSFDTVFTAQARPAAPRGTCCGADLDPSGC
                     EPSLEEILADPIVRLVMKQDGVTELSIRRLMARLEIGGSQPTYGVWS"
     gene            1218..1544
                     /locus_tag="VHN20_00265"
     CDS             1218..1544
                     /locus_tag="VHN20_00265"
                     /inference="COORDINATES: protein motif:HMM:NF018993.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1476 domain-containing protein"
                     /protein_id="HEX2724232.1"
                     /translation="MTMFDERERAFEQMFVHDAEMRFRALARRNKLLARWAAEQLGLG
                     GREADDYVRRAVEAVTDPDADADVPRRLATDLSAVSSYWTEDRLRQVMSEFMTKAVTE
                     VRTEAI"
     gene            complement(1614..>1854)
                     /locus_tag="VHN20_00270"
     CDS             complement(1614..>1854)
                     /locus_tag="VHN20_00270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724233.1"
                     /translation="DAAVISCSAHYQKMRSLFVAFFGSGGNDLDTAIRTRAAGDRRYI
                     AAIVAAIRAEVAKRAGPPGRAGEPAPSPEGEGRLY"
BASE COUNT          276 a          660 c          617 g          301 t
ORIGIN      
        1 ctcaccgccc tcgccgagcg cctgccgcgc ctcgccaatg cgacgctgcg cgtcaccgaa
       61 tggcagggcg aggtggtgtt cctgcacgag gtcgtgcccg gcgccgccga ccgttcctac
      121 gggctgcagg tggcgcgcct cgccgggctg ccgccggccg tgatcgatcg ggccaagacc
      181 atcctcagcg agctcgagcg cgtcgaccgc gagcgcccga cgcgcacgct gatcgacgac
      241 ctgccgctgt tcgccgcgcc ggcgcgcacg gcgacacccc ctgccccgcc gcgcgacgcc
      301 ctgcgcgacg cgctcgacgc catcgacccc gacgacctga cgccgaaaca ggcgctcgag
      361 acgctgtacc ggctcaaggc ggcgcgcggg ggcgcgtaat ccaggccaac tgagcgcagg
      421 tcgccacatc gatacctgcg gtccatcgct ggcgtgaacg gcggcgtctt caaaaagaca
      481 agaaggcagg gtgtccttct cggacggcgc acgctggccc ggtcgtcggc ccacgtgccc
      541 cgccgggcgc agcatgaacg gcatcctcgt attgccgacg cggtttgttt gcgggctgct
      601 gctcgcctgc ctggcgttcg cggcgcattc cgaccgcgcc gaactgcatg gctttcggac
      661 gtttgccgtc ggcttccagc aagccggcct ccatcacggg aagaattcgc ctcttgcgct
      721 cacgtctgcg gcgatcgtcg atgaggacga tcccgaccgg tcgcagaacg actatccgga
      781 cgtgtcgctg gcggcccggc cattcgtgtt gttgcccggt ccggtgcaca gcccgatcga
      841 gcgcgggcgc gtgctcgctc tcatccggca cggaccctgc gccgcgccgc agaccggccc
      901 tcctgatctc cacgcggcct gaggccgaag cctttcgcac aaaccgtggc gaacctggtt
      961 cgccatcctt tgcgtggagt gatcatgatg tctttcgata cggttttcac agcacaggcg
     1021 cgtcctgcgg ccccacgagg gacttgctgc ggcgctgacc tcgacccgtc cggttgcgaa
     1081 ccgtcccttg aggagatcct ggccgatccg atcgtccgcc tcgtcatgaa gcaggacggc
     1141 gtcaccgagc tctcgatccg ccgactgatg gcaagactcg agatcggcgg ctcgcagcca
     1201 acctacggag tatggtcatg acgatgttcg acgaaaggga gcgcgccttc gagcagatgt
     1261 tcgtgcacga cgccgagatg cggttccgcg ccctggcgcg acgcaacaag ctgctggcgc
     1321 gctgggcggc ggagcagctt ggcctcggcg ggcgcgaggc cgatgattac gtgcgccgcg
     1381 cggtcgaggc cgtcaccgat cccgatgcgg atgccgacgt tccgcgccgg ctcgcgaccg
     1441 atctcagcgc agtgtcgagc tattggacgg aggatcggct tcgccaggtc atgtcggagt
     1501 tcatgacgaa ggcggtcacc gaggtgcgca ccgaggcgat ctgaagccgc gtccctgcgg
     1561 gtcacgcggc agaccttccg cgtgaccctt cgccttggtt atcggcgcgg gcattaatac
     1621 agccttccct cgccttccgg agacggggcg ggctcgcccg ctcggcccgg cgggccggcg
     1681 cgcttcgcaa cctcggcgcg gatcgccgcg acaatcgcgg cgatgtaacg gcgatccccg
     1741 gcggccctgg tccggatcgc cgtgtccagg tcattgccgc cgctgccgaa aaacgcgacg
     1801 aacaggctgc gcatcttctg gtaatgcgct gagcacgaga tgaccgccgc gtcg
//
LOCUS       DATAIQ010000018         2083 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_184927, whole genome shotgun sequence.
ACCESSION   DATAIQ010000018 DATAIQ010000000
VERSION     DATAIQ010000018.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2083)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2083)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2083
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_184927"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..393
                     /locus_tag="VHN20_00275"
     CDS             <1..393
                     /locus_tag="VHN20_00275"
                     /inference="COORDINATES: protein motif:HMM:NF016701.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HEX2724234.1"
                     /translation="CLCGAVRFELAVAPFDAGYCHCTHCQQRTGTASSAQALIDGTAL
                     TFTAGEELVTGWTPPAGGMEKCFCRVCGGHLLSRDPGSKVPAAIRMGAFDRDPGVPFS
                     YRQFLRSAASWEPVPDDGLTRFEGRRTG"
     gene            803..1888
                     /locus_tag="VHN20_00280"
     CDS             803..1888
                     /locus_tag="VHN20_00280"
                     /inference="COORDINATES: protein motif:HMM:NF033542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HEX2724235.1"
                     /translation="MSGTMTWVGLDVHARSTQAAAIDTMTGELRRARFGAGVDAPLAW
                     LAELPGPVRACYEAGPTGFGLYRAAVAAGIAMQVIAPGKTPRGPSDRVKTDRKDAELL
                     ARLLLAGSLTRVVVPPPEVEAARELTRAHDACRRDLMTARHRVSKMLLRHGRVYAKPT
                     TWTAEHRRWLSHQHFDQHASDLVFADLLAAVDGLSSRKAAIALRLSQLATDEQWWPTV
                     ARLRSFRGIDTLTAFSLHLELGADWRRFEHAPWLSAWLGLTPSLNQSGESSRQGSITK
                     TGSMLARRLLVESAWHYSRQPRLGATLANRQRGQPDHILAIANRAQQRLYRVNTRMRA
                     RGKPHNVTVVACARELSCFLWAAATAD"
BASE COUNT          297 a          722 c          745 g          319 t
ORIGIN      
        1 tgtctgtgcg gcgcggtgcg cttcgagctc gccgtcgcgc cgttcgacgc cggctactgc
       61 cactgcacgc actgccagca gcgcacgggc acggcgtcgt cggcgcaggc gctcatcgac
      121 ggcacggcgc tgaccttcac cgccggcgag gagctcgtca ccggctggac gccgcccgcc
      181 ggcgggatgg agaagtgctt ctgccgggtc tgtggcggcc acctgctcag ccgtgatccg
      241 gggtccaagg tgcccgcggc gatccgcatg ggggcgttcg atcgcgatcc gggcgtgccg
      301 ttcagctacc gccagttcct gcgttcggcc gcgtcgtggg agccggtgcc cgacgacggg
      361 ctgacgcgct tcgagggccg gcgaaccggc tagagggttg attccgcggc cggggccgtc
      421 gatgtgcgcg ttcgcgcgtc gtacgggcgg cgatcgagtg gtcgaactgc atcgatgagg
      481 gtgagttggt ctgggtggcg gtctttgcgc cgggccgtcg ctggtgtgcg gcaggggtgt
      541 gtcgaatggt gcacgcggag cgatgctcgt tcgacacacc ctcttggccg gaaggggcct
      601 agtcgagtta tccacgtggt gggtggataa ctcgactcga ccctccgagc ccgcaccccg
      661 ctagtagcgg ttggctagac cctatggccc ggtcacccga gacggttgac tgccgggggt
      721 agttggccgg acgctcctcg cgggggtttg tctggccgga gatacggctc cggctgaccc
      781 cagatcatga ggaggtccgg ccatgtccgg aacgatgacg tgggtgggac ttgatgtcca
      841 tgcgcggtcg acgcaggcgg cagcgatcga cacgatgacc ggggagctgc gtcgggcccg
      901 tttcggggct ggcgttgatg cgccgctggc gtggctggcc gagctgcccg gcccagtgag
      961 ggcgtgctat gaggccggac cgaccgggtt tgggctgtat cgcgcggcag tcgccgccgg
     1021 catcgcgatg caggtgatcg cgccgggcaa gacaccgcgt ggccccagcg accgcgtcaa
     1081 gaccgatcgc aaggacgccg agctgctcgc gcggctgctg ctggcgggat cgttgacgcg
     1141 agtcgtcgtc ccgccgccag aggtcgaggc cgcgcgcgag ctgacgcgag cgcacgacgc
     1201 gtgccggcgc gatctgatga ccgctcgtca ccgcgtgtcg aagatgctgc tgcgccacgg
     1261 ccgcgtttat gcgaagccga cgacgtggac ggccgagcat cgccgctggc tatcgcatca
     1321 gcacttcgat caacacgcca gcgacctggt cttcgccgac ctgctcgcgg ccgtcgacgg
     1381 gctgtcgtcg cgcaaggccg cgatcgcgct gcgcctctcg cagctggcca ccgacgagca
     1441 gtggtggccg accgtcgcgc gactgcgcag cttccgcggg atcgacaccc tgacagcgtt
     1501 ttcgctgcac ctcgagctcg gcgctgactg gcggcgcttt gaacacgcgc cgtggctgtc
     1561 ggcgtggctg gggctcacac caagcctcaa ccagtccggc gagagctcgc ggcaaggatc
     1621 gatcaccaag accggctcga tgctggcccg ccggctgctc gtcgagtcgg cgtggcacta
     1681 cagccgccag ccacggctcg gcgcgaccct cgccaaccgc cagcgaggtc agcccgacca
     1741 catcctcgcg atcgcaaacc gcgcgcagca acgcctgtac cgcgtcaaca ccaggatgcg
     1801 cgcccgcggc aagccgcaca acgtcaccgt cgtcgcgtgc gcccgcgagc tgtcgtgctt
     1861 tctctgggcc gccgcgaccg ccgactaaac ccggctgaca gccccacggt cgatgcgccg
     1921 gggcgccggg ccacaggcgg ccggcacgcg cgattcagct atgagcaaca cccgctcgcg
     1981 ggcgccacgc tcggtcctag acagcgctcg ccggcagcac gaaacccggg ccctggggca
     2041 accaaccccc gcatcatcag actggcgacg ccgatcaccg agc
//
LOCUS       DATAIQ010000019         2049 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_92858, whole genome shotgun sequence.
ACCESSION   DATAIQ010000019 DATAIQ010000000
VERSION     DATAIQ010000019.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2049)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2049)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2049
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_92858"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            268..1554
                     /locus_tag="VHN20_00285"
     CDS             268..1554
                     /locus_tag="VHN20_00285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007815491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HEX2724236.1"
                     /translation="MLKKEQNDLLTQTGPGTAMGQLFRSYWIPALLAEELPENDSPPV
                     RVKLLSERLLAFRDSEGRYGLIDEFCAHRGVSLWFGRNEECGLRCPYHGWKYDVTGQC
                     IDVPSEPEESGYAKKIKLKSYPLIKIGDILWTYMGPPEKQPPYPEWEFSLVPPEQTFT
                     SKRLQECNWLQAMEGGIDSSHVSFLHSGGLKNDPLFKGAKGNEYNLKDTKPVFEVVEQ
                     PGGLFIGARRNAEEGKYYWRITPWVMPSFTMVPPRGDHPVHGHFWIPIDDDNCWAWSF
                     DYHPVRALSHEERQAMMDGKGIHVRYVPGTYRPLANKDNDYLMDREAQRQGISYSGIE
                     GIGMQDASLQESMGPICDRTKENLVSTDNGIIMARHRLMKAARALAEKGVQPPGVDPA
                     HHHVRSAALVLPPDQPYKDAAKEALKVRPGQAQVSV"
     gene            1639..>2049
                     /locus_tag="VHN20_00290"
     CDS             1639..>2049
                     /locus_tag="VHN20_00290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724237.1"
                     /translation="MVSESARMTTAHEARFRVNYPNSLPRTIKVVALDEASKTLVDEV
                     SRLPWNRASFFTSMSFEGATPRADQSSIKAWLSDIAGHTKDLIAEIDEADFVVMVAGA
                     GEDAQGASIIGEACLARNVTTIGLIVQSTDTRDED"
BASE COUNT          382 a          689 c          660 g          318 t
ORIGIN      
        1 cgccacggcc gccaggaacg ccagggcgcc gagcgccagc cccagcctcg cccgccgccg
       61 ttcgcgcggg ctgtgcgcca gccccggcag cacatgcagc cggtccgaga ccgggtaaag
      121 ctcgggctgc tctttcggat cgggctggct cgtcatcttc taccaacgcc tgacgcgcga
      181 tcacgttctc ctcttattcg tattcggaga gccgcttgcg cgcgcggagg ccggcgctat
      241 ggtccgccgc aaccggcgga ggatgggatg ctgaagaaag aacaaaacga tctgctgacg
      301 cagaccgggc cggggacggc aatgggccag ctgttccgca gctactggat cccggcgctg
      361 ctcgccgagg aactgcccga gaacgacagc ccgccggtgc gcgtcaagct cctctccgaa
      421 cgcctgctcg ccttccgcga ctccgagggc cgttacggcc tgatcgacga attctgcgcc
      481 caccgcggcg tgtcgctgtg gttcggccgc aacgaggaat gcggcctgcg ctgcccgtat
      541 cacggctgga aatacgacgt caccggacaa tgcatcgatg tcccgtccga gccggaagag
      601 agcggctacg ccaagaagat caagctcaag tcctacccgc tgatcaagat cggcgacatc
      661 ctgtggacct acatggggcc gcccgaaaag cagccgccgt acccggagtg ggagttctcc
      721 ttggttccgc cggagcagac cttcacgtcc aagcggctgc aggaatgcaa ctggctgcag
      781 gcgatggaag gcggtatcga ctccagccac gtgtccttcc tgcactcggg cgggctcaag
      841 aacgaccccc tgttcaaagg cgccaaaggt aacgaataca acctcaagga caccaagccg
      901 gtcttcgagg tggtcgagca gcccggcggc ctcttcatcg gcgctcgccg caatgccgag
      961 gagggcaaat attactggcg catcacgccg tgggtgatgc cgagcttcac catggtgccg
     1021 ccgcgcggcg atcacccggt gcacgggcac ttctggatcc cgatcgacga cgataactgc
     1081 tgggcctgga gcttcgacta tcatccggtc cgcgcgctca gtcacgaaga gcggcaggcg
     1141 atgatggacg gaaagggcat ccacgtgcgc tatgtgcccg gcacgtaccg gccgctcgcc
     1201 aacaaggaca acgactacct gatggaccgc gaggcccagc gccagggtat ctcgtacagc
     1261 ggcatcgaag gcatcggcat gcaggatgcg tctctgcagg agagcatggg gccgatctgc
     1321 gaccgcacca aggagaacct cgtttcgacc gacaacggca tcatcatggc gcggcaccgc
     1381 ctgatgaagg ccgcccgcgc gctggccgag aagggtgtcc agcctcccgg agtcgacccc
     1441 gcgcatcacc acgtgcgctc ggctgcactc gtcctgccgc cggatcagcc ctacaaggac
     1501 gccgccaaag aggcgctcaa ggtccgtccc ggccaggcgc aggtttcggt ttgatacggc
     1561 aaaggggcgc ccggcgggcg cccctttcgt gccggcggcc gaggttcagc ctggctgctg
     1621 gatttgaagg agtagccgat ggtcagcgaa tccgcccgga tgacgaccgc gcacgaagcg
     1681 cgcttccggg tcaattatcc caactcgttg ccacggacga tcaaggtggt cgccctcgac
     1741 gaggccagca agaccctggt cgatgaggtg tcccgcctgc cgtggaaccg cgcctcgttc
     1801 ttcacctcga tgtcgttcga gggggcgacg ccgcgcgcgg atcagtcctc gatcaaggcg
     1861 tggctcagcg acattgccgg ccacaccaag gacctgatcg ccgagatcga cgaggccgat
     1921 ttcgtggtga tggtcgccgg tgccggcgag gacgcgcagg gcgcctcgat catcggcgag
     1981 gcctgcctgg cccgcaacgt cacgacgatc ggcttgatcg tgcaatccac tgacacgcgc
     2041 gacgaggac
//
LOCUS       DATAIQ010000020         2025 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_416207, whole genome shotgun sequence.
ACCESSION   DATAIQ010000020 DATAIQ010000000
VERSION     DATAIQ010000020.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2025)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2025)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2025
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_416207"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(214..1002)
                     /locus_tag="VHN20_00295"
     CDS             complement(214..1002)
                     /locus_tag="VHN20_00295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724238.1"
                     /translation="MAANLTSAQVPQPETDLLWARLGATREALLESQQRLPRGSAGWK
                     AMEAIVNDIDALLPLVTAAEARSTLLNLNSDSDFAFKPRTTSRRVSLFHQWGTKAGAM
                     NNNETLEDFAARMRGKGRIGKYDIEHLQRAILPDGLTSRVEADLLIALDRDVPSAHFS
                     WPGFFIAALTDFAVWRSGRAGYIDRDKSLWLLGALACEGATNRATRALVQIAKEAECF
                     DEAFFAGSASLEPQVVEPQVLEQTVIEPHVVTTARRTAELAIAA"
     gene            complement(1005..1235)
                     /locus_tag="VHN20_00300"
     CDS             complement(1005..1235)
                     /locus_tag="VHN20_00300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015933877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724239.1"
                     /translation="MVTAGQGMLRANSEATNAVEAIASNYLIENGGDPHQALRSIVAD
                     ALADLAEYERRSRRAERLLSRGFVRGQLAQGR"
     gene            1507..1692
                     /locus_tag="VHN20_00305"
     CDS             1507..1692
                     /locus_tag="VHN20_00305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724240.1"
                     /translation="MKIVEEYRKQAAECRNLAKRVGVGDMRDQLERMAENWEALAVQR
                     QRSLRLQGILPPDRSKS"
     gene            complement(1782..>2025)
                     /locus_tag="VHN20_00310"
     CDS             complement(1782..>2025)
                     /locus_tag="VHN20_00310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724241.1"
                     /translation="YSAQACTRAADLNIDSGTPAQTSGTMSELIGLAATGLTLFVAGL
                     GLVAAVLLFGAACVALCWGALPRNNPVEPVNEDGGG"
BASE COUNT          353 a          647 c          663 g          362 t
ORIGIN      
        1 cgggagaggt gggcctagaa gcgggatcaa ttcagatcga atcgatcccg ctctccttct
       61 tattgagccg catggtcttt ctcggcgaag aggtatccac ttcgccggat catgctgtaa
      121 aaaaatctcg ggcttgcggc ccgagatgag gtagccgagg gcaggatcgt ttcagtttga
      181 agcaatcccg cccttaagcg gcgtgcacat tcgttaagct gcgatcgcga gttcggccgt
      241 cctgcgcgcg gtcgtgacaa cgtgcggctc gataaccgtc tgctcgagga cctgcggctc
      301 gaccacctgc ggctcgaggg aagccgagcc ggcgaagaaa gcctcgtcga agcactcggc
      361 ctccttggcg atctggacga gggcccgcgt ggccctgttg gtagcgcctt cacaggcgag
      421 cgcgccgagg agccagagcg acttgtcccg gtcgatgtag ccggcgcggc ccgaccgcca
      481 cacggcgaaa tcggtgagcg cggcgatgaa aaatcccggc caggagaaat gcgcgctcgg
      541 cacgtcacgg tcgagggcga tcaggagatc ggcctcgacc cggctcgtga ggccgtccgg
      601 caggatcgcg cgctgcagat gctcgatgtc gtattttccg atgcggccct tgccgcgcat
      661 gcgtgcggcg aagtcttcga gtgtctcgtt gttgttcatg gctcccgcct tcgttcccca
      721 ttgatggaac aggcttacgc ggcggctcgt tgtgcgaggc ttaaacgcaa aatctgaatc
      781 gctgttgagg ttaagcagcg ttgagcgcgc ctcggccgcc gtcacgagcg gcagcagcgc
      841 gtcgatgtcg ttgacgatgg cctccatcgc cttccatccg gcagagccgc gcggcagccg
      901 ctgctggctc tcgagaagcg cctcgcgcgt cgcccccagc ctggcccaca gcaggtctgt
      961 ctcgggctgg ggcacttgtg cagacgtcag gttggccgcc atcgttacct cccctgagcc
     1021 agctggccgc gcacgaagcc gcgcgacagc agccgttcgg cgcggcggct cctgcgctcg
     1081 tattcggcga ggtcggcaag cgcgtcggcg acgatgctcc gcaaagcctg gtgcgggtcg
     1141 ccgccattct cgatcaggta gttcgacgcg atcgcctcga ccgcgttggt tgcctcggaa
     1201 tttgcacgca acatcccctg cccggcggtc accatgcctt gctcctgctc ttcgcgctgc
     1261 cctgatgttc ctactttgtt cttggatggg cggtgagtca agatgccgcg tgcacaggtc
     1321 gtgcatcatt tcacaccagc tgctacgcag cgcgcatcgc gcgagccgat gcaggcccgc
     1381 caacgtcagg aaggcgggcc gcgaacccct ccgtagaact acggagttgc cacgcctcgc
     1441 tcaatcggcc cttggtgcgg cggcttggcc tttcggtgcg cggcggcccg gccaagggaa
     1501 tcaccggtga agatcgtcga ggagtatcga aaacaggctg cggaatgccg caacctggcg
     1561 aaacgcgttg gtgtgggcga tatgcgtgat cagctcgaac gaatggccga aaactgggag
     1621 gcgcttgccg tgcagcgaca gcgctctctg cggctccagg gcatcctccc gccggaccgt
     1681 tcgaaatcct gaagccttgg agcaccgccg aggccgcaag aagcagccgt gtcatgattt
     1741 gcgcgcgacc gcgcgctgaa gccccaccag cgacgcgacg gctacccgcc gccgtcctcg
     1801 ttgacgggct cgacaggatt attgcggggg agggcgcccc agcacaacgc cacgcaggcc
     1861 gccccgaaga gcagcactgc tgcaactaac ccgaggccgg ccacgaacag cgtcaggccg
     1921 gtagcagcga ggccaataag ctcggacatg gtccccgaag tttgggcggg ggtccctgaa
     1981 tcgatattta aatcggcagc gcgtgtgcag gcctgggcgg aatat
//
LOCUS       DATAIQ010000021         1985 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_416209, whole genome shotgun sequence.
ACCESSION   DATAIQ010000021 DATAIQ010000000
VERSION     DATAIQ010000021.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1985)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1985)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1985
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_416209"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1359)
                     /locus_tag="VHN20_00315"
     CDS             complement(<1..1359)
                     /locus_tag="VHN20_00315"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158526.1"
                     /note="Catalyzes the rate-limiting step in dNTP synthesis;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vitamin B12-dependent ribonucleotide reductase"
                     /protein_id="HEX2724242.1"
                     /translation="MRIERRYTRQGQSPYAAIPFRLATSEIKNPDGSVVFRQTDIEVP
                     ESWSQVAADVLAQKYFRKAGVPARLKKVEENSVPSWLWRSVADEAALKKLPDGERTVS
                     ESSSKQVFDRLAGCWTYWGWKGGYFSSEEDARAFYDELRYMLAMQMCAPNSPQWFNTG
                     LHWAYGIDGPSQGHFYVDYATGKLTKSKTAYEHPQPHACFIQSVEDDLVNEGGIMDLW
                     VREARLFKYGSGTGSNFSRLRGEGERLSGGGRSSGLMSFLKIGDRAAGAIKSGGTTRR
                     AAKMVVVDVDHPDIEAFIDWKVKEEQKVAALVTGSKVASKHLKAIMKACLNCEGEGDA
                     CYDPDKNPALKREIKFARRASVPDNYIKRVIQFARQGYKDIEFDIYDTDWDSEAYLTV
                     SGQNSNNSVSITDDFLRAVDGDGDWSLTKRIDGKVSKTLKARELWERIGYAAWASADP
                     GLH"
BASE COUNT          305 a          680 c          634 g          366 t
ORIGIN      
        1 gtgcaggccc ggatcggccg acgcccaggc ggcgtagccg atgcgctccc acagctcgcg
       61 cgccttcagc gtcttcgaca cctttccgtc gatgcgcttg gtcaggctcc agtccccatc
      121 cccatccacc gcgcgcaaga agtcgtcggt gatgctgacg ctgttgttgg agttctggcc
      181 ggagaccgtg aggtaggcct cgctgtccca gtcggtgtcg tagatgtcga actcgatgtc
      241 cttgtagccc tggcgcgcga actggatgac gcgcttgata tagttgtccg gcacgctggc
      301 gcggcgcgcg aacttgatct cgcgcttcag ggccgggttc ttgtcgggat cgtagcaggc
      361 gtcgccctcg ccctcgcagt tgaggcaggc cttcatgatc gccttgaggt gcttgctcgc
      421 gaccttggac ccggtgacga gcgcggcgac cttctgctcc tccttgacct tccagtcgat
      481 gaaggcctcg atgtccggat ggtcgacgtc gacgaccacc atcttggcgg cgcggcgcgt
      541 cgtgccgccc gacttgatgg cgccggcggc gcggtcgccg atcttcagga aggacatcag
      601 gccggacgag cgcccgccgc ccgacagccg ctcgccttcg ccgcgcagcc tcgagaagtt
      661 ggagccggta ccggagccgt atttgaacag gcgcgcctcg cgcacccaca ggtccatgat
      721 gccgccctcg ttgacgaggt cgtcctcgac gctctggatg aagcaggcgt gcggctgcgg
      781 gtgctcgtag gcggtcttgg acttggtcag cttgccggtg gcgtaatcca catagaagtg
      841 gccctggctc ggcccgtcga tgccgtaggc ccagtgcagc ccggtgttga accattgcgg
      901 cgagttgggc gcgcacatct gcatcgccag catgtagcgg agctcgtcgt agaaggcccg
      961 ggcgtcctcc tcgctcgaga aatagccgcc cttccagccc cagtaggtcc agcagccggc
     1021 gagccggtcg aagacctgct tggaggagct ttccgacacg gtgcgctcgc cgtcgggcag
     1081 cttcttcagc gccgcctcgt cggcgaccga gcgccacagc cacgacggga cgctgttctc
     1141 ctcgaccttt ttcaggcgcg ccggcacgcc cgccttgcgg aaatactttt gcgcgagcac
     1201 gtcggccgcg acctggctcc aggactccgg cacctcgatg tcggtctggc ggaagacgac
     1261 cgagccgtcc gggttcttga tctcgctggt ggcgaggcgg aacggaatcg ccgcataagg
     1321 tgactggcct tgcctcgtat agcgccgctc gatccgcatc ctcatcgctc catttgcgcg
     1381 tcccagcccc cgccggtcgc tgttctgtgg cctcggttcc acctccccgc ggcgcgcacg
     1441 aaccccctcg gtccaaaggc gtgagaagcc ggaccgtgcc gccgcgctgg agatgtggag
     1501 atgacgcgcc gccgacccgt aacgacaggc aggcgcgtca tggaagcaga cgctagttcg
     1561 agtcctgcga ggccgtcaat tgcgcgccag ccacgtaccg gcatccaact agttgtgtgg
     1621 gccacctgag gcatccacca aatatagtgt ttcgggcacc gttttgaaag ccgccgcgca
     1681 aggtttccgc tgccgttgca agagcttgcg acaacctccc tgacggcccc tttcgcggcc
     1741 ccgaaagggc ctccagaagc ctgtggatga ctgaggaagt cggggacgga atcggcttgt
     1801 caggaccagc ctcgtccggg ccgctcccga ctcgaccgca ccatcctccc actgtcatgg
     1861 ccgggcttgg cccggccatc ccgatcggaa ggtcgcgatg cttccgatcc gcgaggcggc
     1921 agcgctcttc caaccgggat caccggcaca agtgttcagc ccggggacat agccgacacc
     1981 cgttc
//
LOCUS       DATAIQ010000022         3519 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_185084, whole genome shotgun sequence.
ACCESSION   DATAIQ010000022 DATAIQ010000000
VERSION     DATAIQ010000022.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3519)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3519)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3519
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_185084"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..346)
                     /locus_tag="VHN20_00320"
     CDS             complement(<1..346)
                     /locus_tag="VHN20_00320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX2724243.1"
                     /translation="MQRPNMLWRVYVTAFYLFLFAPLVTVAVFAFNASTFPSPPWKGF
                     TLAWFIGTGAEFGKPGVLRDRAMLGSIAASFKVAIPVAVLAVVLGTANAFLLECARFR
                     GKTVVAMMMLWPL"
     gene            complement(351..1214)
                     /locus_tag="VHN20_00325"
     CDS             complement(351..1214)
                     /locus_tag="VHN20_00325"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018689546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX2724244.1"
                     /translation="MRAPRRFGLFLLLAPAALWLGLLVILPHVEMAVLSLSERVAPRV
                     YAFGFGNYREFFVEPLYWRTFARTAVMSIVVTALTLLLAFPVALYIARAARQRAKSLL
                     FLLCLLPFWVSELVRTLGWMILLRETGVISTALQRLGIASGPVELLYNDGAVILGLVY
                     GGLLFMVVPLVNALDSLDPALVEAGYDLGGSRATVLRRIVIPHAMPGIVAGSIVVFML
                     TVGNFATPVLLGGKNGLWFTEQIYSQFITRFNWPLGSAFGFLLLALSSLIVWAGLKLS
                     RQSLGETLRQG"
     gene            complement(1211..2296)
                     /locus_tag="VHN20_00330"
     CDS             complement(1211..2296)
                     /locus_tag="VHN20_00330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2724245.1"
                     /translation="MSTAPDLALERVSKRFGDHLAVDDVSFSVGKGEFFSILGPSGCG
                     KTTLMRMIAGFEEPSAGEIRIGGTSMLGIPANRRPVNMVFQSLALFPMMSVGENVAYG
                     LRCRGVGKREAAARTGKMLERVGLPGFADRAVATLSGGQRQRVAIARCLVLDPTLVLL
                     DEPLGALDLKLREQMKLELKQIQATFGTTFVYITHDQSEALVMSNRVAVMNAGRFEQV
                     GSPRELYHHPATRFVAAFVGDSNQWTGEMLPAARGSAAIRLPGGSVIEGTGKAAQARG
                     ACFVRPEAIAIAGAAEALDGLPNRFSGRVAAVLFDGANSSVVVEAPDLGAPLRAALPQ
                     TGAMARLGVGAPVVVGWSAEAARIFPA"
     gene            complement(2356..3429)
                     /locus_tag="VHN20_00335"
     CDS             complement(2356..3429)
                     /locus_tag="VHN20_00335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006937073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX2724246.1"
                     /translation="MKKTRIAFGLAAALGAGFASGAASAAEKLRLLTWADYAPPEIVQ
                     QFTKETGIEVEITISNNEEMISKLRATQGAGFDLAQPSQDRILGPQQEFGIYKPLDQS
                     KLDAKLFIPSMLEATKKNTSVDGKVFGVPHIWGTDGLVVNAKAVPKVADYADLCGPEV
                     AGKASIRAKRPSLIAFAFSMGMDPFAAYGSAKDYTAMMEKVGAKLTECKKNIKFFWEG
                     KDALLNAIRAGEVTAAMAWDTGGWKLNAENADIKFIAPKSGALGWVDTFAIPARGRAD
                     DAAYKWINFNMRPEIAAKVAASAGNFTASNGADKLTHGKLKEQYAESFPQAAIDNIKW
                     YPAVPAGIEEIEGKILDRVKAGS"
BASE COUNT          592 a         1178 c         1215 g          534 t
ORIGIN      
        1 ccagcggcca gagcatcatc atcgccacga cggtcttgcc cctgaaccgg gcgcactcga
       61 gcaaaaaagc attcgcggtg ccgagcacga cggcgagcac ggccaccggg atcgccacct
      121 tgaagctcgc cgcgatgctg ccgagcatgg cgcggtcgcg cagcaccccg ggcttgccga
      181 actcggcgcc ggtgccgatg aaccaggcga gggtgaagcc cttccacggc ggcgacggga
      241 aggtgctggc gttgaaggcg aacaccgcga cggtgacgag gggcgcgaac aggaacaggt
      301 agaaggccgt gacgtagacg cgccagagca tgttcgggcg ttgcatcgtc tcacccctgg
      361 cgcaacgtct cgccgagcga ctgccgcgag agcttcaggc cggcccagac gatcagcgat
      421 gacaacgcca gcagcaggaa gccgaaggcc gagcccaagg gccaattgaa gcgcgtgatg
      481 aactggctgt agatctgctc ggtgaaccac agcccgttct tgccgccgag cagcacgggc
      541 gtcgcgaaat tgccgaccgt cagcatgaac acgacgatcg agccggcgac aatgcccggc
      601 atcgcgtgcg ggatgacgat gcggcgcagc accgtcgcgc ggctgccgcc gaggtcgtag
      661 cccgcttcga cgagcgccgg gtcgaggctg tcgagcgcat tgacgagcgg caccaccatg
      721 aacagcaggc cgccatagac gagcccgagg atcacggccc cgtcgttgta gaggagctcg
      781 accggcccgg aggcgatgcc gagcctttgc agagccgtcg agatgacgcc ggtctcgcgc
      841 aagaggatca tccagccgag cgtgcgcacc agctcggaga cccagaatgg cagcaggcac
      901 aggaggaaca ggagcgactt ggcccgctgg cgcgcggcgc gggcgatgta gagcgcgacc
      961 gggaaggcga gcagcaacgt gagcgcggtg accacgatgg acatcacggc ggtgcgggcg
     1021 aaggtccgcc aatagagcgg ctcgacgaag aactcgcggt aattgccgaa gccgaaggcg
     1081 tagacgcgcg gggcgacgcg ttcgctcagc gacagcaccg ccatctccac atgcggcagg
     1141 atcacgagca gcccgagcca cagcgccgcc ggcgccagca ggagaaacag cccgaagcgc
     1201 cgcggcgccc tcatgcggga aagatccgcg cggcctcggc gctccagccg accacgaccg
     1261 gcgcgccgac gccaagcctc gccatggccc cggtctgcgg gagcgccgcg cgcagcggcg
     1321 cgccaaggtc cggcgcctcg accaccaccg aggagttggc gccgtcgaac agaaccgccg
     1381 cgacgcggcc ggaaaagcgg ttgggcagcc cgtcgagcgc ctccgccgcg cccgcgatgg
     1441 cgattgcttc cgggcgcacg aagcaggcgc cgcgtgcctg cgcggccttg ccggtgcctt
     1501 cgatcacgct gccgccgggg aggcggatgg cagccgagcc gcgcgccgcc ggcagcatct
     1561 cgccggtcca ttgattgctg tcgccgacga aggcggcgac gaagcgcgtg gccggatgat
     1621 ggtagagctc gcgcgggctg ccgacctgct cgaaacgacc cgcattcatc accgcgacgc
     1681 gattcgacat gaccagcgcc tcggactggt cgtgcgtgat gtagacgaag gtcgtgccga
     1741 aggtcgcctg gatttgcttg agctcgagct tcatctgctc gcgcagcttc aggtcgaggg
     1801 cgccgagggg ctcatcgagc agcaccagcg tcgggtcgag cacgaggcag cgggcgatcg
     1861 ccacgcgctg gcgctgcccg cccgagagcg tcgccacggc ccggtcggcg aagcccggca
     1921 gcccgacccg ttcgagcatc ttcccggtgc gcgcggcggc ctcgcgcttg ccgacgccgc
     1981 gacagcgcag gccataggcg acgttctcgc cgacgctcat catcggaaac agcgccagac
     2041 tctggaacac catgttgacc gggcggcggt tcgccgggat gccgagcatc gaggtgccgc
     2101 cgatgcggat ctcgccggcg ctcggctcct cgaagccggc gatcatccgc atcaaggtgg
     2161 tcttgccgca gcccgacggg ccgaggatcg agaagaactc gcccttgccg acggaaaagc
     2221 tcacgtcgtc gacggcgagg tgatcgccga agcgttttga tacccgttcg agcgcgagat
     2281 cgggcgcggt cgacatttat ccctcccctt ctggggaggg acaattgcgt gtagccactg
     2341 tcggacgtgc gccgctcagg agccggcctt cacgcgatcc aggatcttgc cttcgatctc
     2401 ctcgatcccg gccggcacgg caggatacca cttgatgttg tcgatggcgg cctgggggaa
     2461 gctctccgca tattgctcct tgagcttgcc gtgcgtgagc ttgtcggcgc cgttcgaggc
     2521 cgtgaagttg ccggccgagg cggcgacctt ggcggcgatc tcgggccgca tattgaagtt
     2581 gatccacttg taggcggcgt cgtccgccct cccccgcgcc gggatggcaa aggtgtcgac
     2641 ccagccgagc gcgcccgatt tgggggcgat gaacttgatg tcggcgttct cggcgttgag
     2701 cttccagccg ccggtgtccc acgccatcgc ggcggtgacc tcgccggcgc ggatggcgtt
     2761 gagcagcgcg tccttgccct cccagaagaa tttgatgttc ttcttgcact cggtcagctt
     2821 ggcgccgacc ttctccatca tggccgtgta gtccttggcg ctgccataag ccgcgaaggg
     2881 gtccatcccc atcgagaagg cgaaggcgat caacgagggg cgcttggcgc ggatgctcgc
     2941 cttgccggcg acctccggtc cgcacaggtc ggcgtagtcg gccaccttgg gcacggcctt
     3001 ggcgttcacg acgagcccgt cggtgcccca gatgtgcggc acgccgaaaa ccttgccgtc
     3061 gacgcttgtg ttcttcttgg tcgcctcgag catcgagggg atgaacagct tcgcatcgag
     3121 cttggactgg tcgagcggct tgtagatgcc gaattcctgc tgcgggccga ggatgcggtc
     3181 ctggctcggc tgggcgaggt cgaagccggc gccctgcgtc gcccggagct tcgagatcat
     3241 ctcctcgttg ttggagatcg tgatctcgac ctcgatgccg gtctcctttg tgaactgctg
     3301 cacgatctcc ggcggggcgt aatcggccca ggtcagcagc cgcagcttct cggccgccga
     3361 ggcggctccg gaggcgaacc ccgcgcccag cgccgccgcc aggccgaatg caatccgtgt
     3421 cttcttcatg acgatcctcc cttgcgacgg cgccttgtcc ctgccgtgtc gtggatgctt
     3481 cgggcggcgc caggctgacg ccatcatgcg acggccgtg
//
LOCUS       DATAIQ010000023         3141 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_231195, whole genome shotgun sequence.
ACCESSION   DATAIQ010000023 DATAIQ010000000
VERSION     DATAIQ010000023.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3141)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3141)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3141
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_231195"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            132..2237
                     /locus_tag="VHN20_00340"
     CDS             132..2237
                     /locus_tag="VHN20_00340"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing methyl-accepting
                     chemotaxis protein"
                     /protein_id="HEX2724247.1"
                     /translation="MRSTKIAITIGALLRTLFAVMLILVIGALALPIHADLSQKADSE
                     RITGIARAGRTVFTALQNTRTERGPTRTTLEGKEPGSGAFIAGIKALRAKSEPAVLAV
                     IEQCAATDCVGTDKEVFAGLAASVQKLVAIRKEVDAGMRVPLSERRANLAKDFNAAAT
                     DVIDRLEKMSNVLGEKVRMADAETAELMAIKQAAWLARDGVGLERTVMGDAFNAKAMS
                     PAMQRKATELRARSEVTWAVVRELVARPGVPEDVVSAVNHAQDLAFSSYEKIRKPVLD
                     ALAAGQPSPTPYEDVIKASNPALEALTAVAENAMAAAQRQAEAKGAEAGRSLTFHSTL
                     LGLALVVGMVGFFVVQRRVTNPIGTMTAAMRRLADGDTRVVIPGTSRRDEIGAMAKAV
                     EVFKASMSEAEDLRMQQERTKAMTDEERRVTLMGLADAFEQSVGGIVGVVASAAGQMR
                     GAAQNMTGRVSEAGRLASAVSTAASQANANVQTVAAATEELSSSIDEISQQVSLSAGI
                     AREAAGQAERTNHTVEGLSQAADKIGQVVSLIQQIAGQTNLLALNATIEAARAGEAGK
                     GFAVVAQEVKQLATQTSKATEDIAAQIGTIQETTSQAVLAIQEIGGTIRRINEIAGGI
                     AAAVEEQGAATREIAASVADAAQGTSHVTSNIAGVTDASVEVGEAANQVLSSAGALSS
                     EAERLRSEVDKFLATVRAA"
     gene            2687..>3141
                     /locus_tag="VHN20_00345"
     CDS             2687..>3141
                     /locus_tag="VHN20_00345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724248.1"
                     /translation="MPAALLTSLEEVRRQTLRRMDLRALWMIPLCAALGFGLSKLFIR
                     DGSLLIDGFVTLAGAFTGWGLAADPPLQAFRTAYKERVLPHLVAQFGALRYRRAVQPH
                     LERLVGLDLLPAYSHAVVEDEIFGSHRDVPLSIVEADLTAGHGKSRHTV"
BASE COUNT          545 a         1024 c         1094 g          478 t
ORIGIN      
        1 cgcggaacgg tggcgggtcg gcacaccgac ccccgtgccg cgcgggcgcc gtgcctgcca
       61 aatgttgtca acctttttcg cgtatcaccc tccggttgcc agaagccatt gcgagtcgcg
      121 ggggccgccg gatgcgttca acgaagattg cgatcacgat cggagcgctg ctgcgaaccc
      181 tcttcgccgt catgttgatc ctcgtcatcg gcgctctggc gttgccgatc catgccgacc
      241 tttcgcagaa ggcagatagc gaaaggatca ccggtatcgc gcgcgccggt cgcacggtgt
      301 tcacggcgtt gcagaacacc aggacggaac ggggcccgac gcgcacgacc ctcgaaggca
      361 aggagcccgg ctcgggcgcc ttcatcgccg gcatcaaggc gctgcgagct aaatcggagc
      421 ccgccgtgct cgccgtcatc gaacaatgcg ccgcgactga ctgcgtcggc accgacaagg
      481 aggttttcgc cgggcttgcg gccagcgtcc agaagctcgt cgcgatccgc aaggaggtcg
      541 atgccggaat gcgcgttccg ctgagcgaac ggcgcgcgaa cctcgccaag gacttcaatg
      601 cggccgccac cgacgtcatc gatcgtctcg agaagatgtc gaacgtgctc ggcgagaagg
      661 tcaggatggc cgacgccgaa acggccgagc tgatggccat caagcaggcg gcctggctgg
      721 cgcgcgacgg cgtcggcctg gaacgcaccg tgatgggaga tgcgttcaat gccaaggcca
      781 tgtcgccggc catgcaaagg aaggcgaccg agctgcgcgc gcgcagtgag gtcacgtggg
      841 cggtggtgcg cgagctcgtc gccaggcccg gtgtgcccga ggatgtggtg tccgcagtga
      901 accacgcgca agatctggcc ttttccagct acgagaagat ccgcaagccg gtgctcgatg
      961 cgctcgccgc cgggcagccg agcccgacgc cttacgagga tgtgatcaag gcttcgaacc
     1021 cggcgctgga ggcgctgacc gcggtcgccg agaacgccat ggcggccgcc cagagacagg
     1081 ccgaggcaaa aggcgcagag gccgggcgga gtctcacctt ccattcaacg cttctcggcc
     1141 tcgcgctcgt tgtcggcatg gtcggcttct ttgtcgtcca gcggcgcgtc acgaacccga
     1201 tcggcacgat gacggcagcc atgcgccgcc tcgccgacgg ggacacgcgc gtcgtgatcc
     1261 cgggcacctc gcgcagggac gagatcggcg cgatggccaa ggccgtggag gtcttcaagg
     1321 cgagcatgag cgaggcggag gacctgcgca tgcaacagga acgcaccaag gcaatgaccg
     1381 atgaggagcg tcgcgtcacg ctcatggggc tggccgatgc cttcgagcaa agcgtcggcg
     1441 gcatcgttgg cgtggtcgcg tcggccgccg gccagatgcg cggcgccgct cagaacatga
     1501 ccggcagggt gtcggaggcg ggccggctcg cgtccgcggt ttcgaccgcc gcctcgcagg
     1561 ccaacgccaa tgttcagacg gtcgcggcgg cgaccgaaga gctgtcttcg tcgatcgacg
     1621 agatcagcca gcaggtcagc ctgtcggccg gaatcgcgcg cgaagctgcg ggccaggccg
     1681 agcgcaccaa tcataccgtc gagggtctca gccaggccgc cgacaagatc ggacaggtcg
     1741 tcagcctgat ccagcagatc gccgggcaaa cgaaccttct ggcgctcaac gccacgatcg
     1801 aggcggcgcg cgccggagag gccggcaagg gattcgccgt cgtcgctcag gaggtgaagc
     1861 agctggcgac gcagacgtca aaggccaccg aggacatcgc cgcccagatc ggtacgattc
     1921 aggagacgac gagccaggcc gtgctcgcga tccaggagat cggcggcacg atccgccgga
     1981 tcaacgagat cgccggcggc attgccgcgg ccgtcgagga gcagggcgcc gccacccgcg
     2041 agatcgccgc gagcgtcgcc gatgccgcgc agggaacctc ccacgtcacc agcaacatcg
     2101 ccggcgtgac ggacgcgtcg gtggaggtcg gcgaagcggc aaaccaggtg ctctcgtccg
     2161 cgggggcctt gtcgagcgag gccgaacggc tgcgcagcga agtcgacaag ttcctcgcga
     2221 ctgtcagagc tgcctgaggc gcaaacgccg aaaggaccgg gtcgggtgaa tgggatccct
     2281 tcgtgcggtc cgccctcagg gaatacgaca cggtcgcgta gtgcggagct tgaacatccg
     2341 gcaaggggaa gcgaataggg agcgtgcggt gatcgtcgcg ggtcacatcg ctcttgcaat
     2401 tcggaacggg ctcgaatgaa attcagctga cccttgtcag ccgggcccgg ttcccacgat
     2461 catgatcctc gtatccgatg cgcgcgtgat ggcgctgccg atgcctgcaa ggccgaggca
     2521 cgcggacgcg ggtccgcgca gccttcggct catctctggg cactgttgag gcgacatgct
     2581 gggaaaggct tgggcccggt tgagggtcag cctcggcggc gcccgccggg cccaatcagg
     2641 ttcggccgtg tcgcagagcc cgtccgcagc ggaccacgac agtgtcgtgc ctgcggctct
     2701 cctgacgagc ctggaggagg ttcgtcgcca gacgctgaga cggatggatt tgcgcgcgct
     2761 ctggatgatt ccgctttgcg ccgcgctcgg attcggcctg tcgaagctct tcatccggga
     2821 cggctcgctg ctcatcgacg gcttcgtcac gctggctggc gcgttcacag ggtggggcct
     2881 ggcggccgac ccgcccctcc aggccttcag gacggcctac aaggagcgcg ttctcccgca
     2941 tctcgtcgcg cagttcggcg cgctcaggta ccgtcgcgcc gtgcagccgc atctggagcg
     3001 gctcgtcggt ctcgacctgc tgccggctta cagccatgcg gtcgtcgagg acgagatttt
     3061 cggctcgcac cgcgacgtgc cgctcagcat cgtcgaggct gacctgactg cgggccatgg
     3121 caagagccgc cacaccgtgt t
//
LOCUS       DATAIQ010000024         2162 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_185092, whole genome shotgun sequence.
ACCESSION   DATAIQ010000024 DATAIQ010000000
VERSION     DATAIQ010000024.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2162)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2162)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2162
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_185092"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            67..1515
                     /gene="ntrC"
                     /locus_tag="VHN20_00350"
     CDS             67..1515
                     /gene="ntrC"
                     /locus_tag="VHN20_00350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017486081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006808 - regulation of nitrogen
                     utilization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrogen regulation protein NR(I)"
                     /protein_id="HEX2724249.1"
                     /translation="MPTGNILLADDDPAIRTVLNQALSRAGYDVRSTGNAATLWRWVA
                     QGEGDLVITDVVMPDENAFDLLPRIKRVRPELPIIVMSAQNTFMTAIRASERGAYEYL
                     PKPFDLKELVAIVGRALSRPRGMATANGPIEGEDIPLVGRSPAMQEIYRALARLMPTD
                     LTVMITGESGTGKELVARALHDYGKRRSGPFVAVNMAAIPRELIESELFGHEKGAFTG
                     ATARSAGRFEQAEGGTLFLDEIGDMPMEAQTRLLRVLQQGEYTTVGGRVPIKTNVRII
                     AATNKDLRISIQQGFFREDLFFRLNVVPLRLPPLRERNEDVPDLVRHFFGLVEKEGLS
                     RKQLDGEAMDRLKRYRWPGNVRELENLVRRLAALYPQETITGPIVDGELDASPLPIAL
                     PAGQAPQSEEGLAGAVERHLTQYFADFKDGLPPPGLYHRILREIEGPLIGAALAATRG
                     NQIRAAELLGVNRNTLRKKVRDLELQVIRTGR"
     gene            1750..>2162
                     /locus_tag="VHN20_00355"
     CDS             1750..>2162
                     /locus_tag="VHN20_00355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing sensor histidine kinase"
                     /protein_id="HEX2724250.1"
                     /translation="MAAALASALATFLVLGGMTPILPTHDVVVWVLLFNVVLVLVLIG
                     IVAWEARTLVIARRAGAAASGLHVRIVGLFSLVAVLPAILVAVVATMTLDRGLDPWFT
                     SSIKVMMSNTVEIARSYRDSQCRTIARETNLMAADL"
BASE COUNT          370 a          723 c          719 g          350 t
ORIGIN      
        1 cgttccgcgt tctgctgccc atgtcgagcc cgcgcgacgg gcgtgaatcc gagctttgag
       61 gactccatgc cgaccggaaa cattctcctc gccgacgacg atccggccat ccggaccgtg
      121 ctgaaccagg ccttgtcgcg cgccggatac gacgtccgct cgacgggaaa tgccgccacg
      181 ctgtggcgct gggtggcgca aggcgagggc gatctcgtga tcaccgacgt ggtgatgccc
      241 gacgagaacg cgttcgacct gctgccgcgc atcaagcgcg tgcggccgga gctgccgatc
      301 atcgtcatga gcgcgcagaa cacgttcatg acggccatcc gcgcgtccga gcgcggcgcc
      361 tacgaatatc tgccgaaacc tttcgacctg aaggagctcg tggcgatcgt cgggcgcgcg
      421 ctgtcgcggc cgcgcggcat ggcgaccgcc aacggaccga tcgagggcga ggacattccg
      481 ctcgtcggac gctcgcctgc catgcaggag atctatcgcg cgctcgcccg cctcatgccg
      541 acagatctga cggtgatgat cacgggcgaa tcgggcaccg gcaaggaact cgtggcgcgg
      601 gcgctgcacg attacggcaa gcggcggagc gggccgttcg tggcggtcaa catggcggcg
      661 atcccgcgcg agctcatcga gtcggaattg ttcggccacg agaagggcgc gttcacaggc
      721 gcgaccgcgc gcagcgccgg ccgcttcgag caggccgaag gcggcaccct gttcctcgac
      781 gagatcggcg acatgccgat ggaagcgcag acgcggctgc tgcgcgtcct gcagcagggc
      841 gaatacacca ccgtcggagg ccgggttccg atcaagacca acgtgcgcat catcgccgcc
      901 accaacaagg acctgcgcat ctcgatccag cagggattct tccgcgaaga cctgttcttc
      961 cgcctcaatg tcgtgccgct gcgcctgccg ccgctgcgcg aacgcaacga ggacgtgccc
     1021 gatctcgtcc gccacttctt cgggctggtc gagaaggagg gcctcagccg caagcagctg
     1081 gacggcgagg ccatggaccg gctgaagcgc taccgctggc ccgggaacgt gcgcgagctg
     1141 gaaaacctcg tgcgccgcct cgccgctctc tatccgcagg aaacgatcac cggaccgatc
     1201 gtcgacggcg agctcgatgc atcgccgctg ccgatcgcgt tgccggcggg gcaggcgccg
     1261 caatccgagg aaggcctcgc cggcgcggtg gagcgtcacc tgacgcagta tttcgccgac
     1321 ttcaaggacg gcctgccgcc gcccggactc tatcatcgca tcctgcgcga gatcgaggga
     1381 ccgctgatcg gcgccgcgtt ggcggcgacg cgcggcaacc agattcgcgc cgccgagctg
     1441 ctcggcgtca acaggaacac gctgcgcaag aaggtgcgcg atctggaatt gcaggtcatt
     1501 cgaaccgggc gttgaaaatt cgtcaggcaa ttcaaaccgg gcgttgaaaa ctcccgactt
     1561 cgggtagact cgccttggaa atgtattatt ttcaccacag tgttgtgatg atgcaccacg
     1621 ctcaaggggc ataggcgcag cggcgcaagc cgcggagcta atttcttgaa cgattcggac
     1681 catcgacctg cgcgcgcgag cgtagccgcg gacagacggc gtggaccggg atggctgggc
     1741 acgatttccg tggccgccgc cctggcgtcg gcgctcgcca cattcctcgt cctcggcggc
     1801 atgacgccga tcctgcccac gcacgacgtc gtcgtctggg tgctgctgtt caacgtcgtg
     1861 ctggtgctgg tgctgatcgg catcgtcgcc tgggaagcgc ggacgctggt gatcgcgcgg
     1921 cgcgccggcg ccgccgcctc gggcctgcat gtgcgcatcg tcgggctgtt cagcctcgtc
     1981 gccgtcctgc cggcgatcct ggtggcggtc gtcgcgacga tgacgctcga ccgcggcctc
     2041 gatccctggt tcacgagctc gatcaaggtg atgatgtcga acaccgtcga gatcgcgaga
     2101 agctatcgcg actcgcaatg ccggacgatc gcccgcgaaa ccaacctgat ggccgccgac
     2161 ct
//
LOCUS       DATAIQ010000025         7360 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_93269, whole genome shotgun sequence.
ACCESSION   DATAIQ010000025 DATAIQ010000000
VERSION     DATAIQ010000025.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 7360)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7360)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7360
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_93269"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(107..1219)
                     /locus_tag="VHN20_00360"
     CDS             complement(107..1219)
                     /locus_tag="VHN20_00360"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2724251.1"
                     /translation="MLRVENLVKRFATDASQPAGGVFGVGFEVKPGEMFTLLGPSGCG
                     KTTTLRCVAGLEQPDRGLITLGQTPIYDAASGRTVPMYDRDIGMVFQSYAIWPHMSVF
                     ENAAYPLRVSRRQRYTRADIVSRVDRVLATVGLEKFKDRSATQLSGGQQQRLALARAL
                     VREPKLLLLDEPLSNLDAQLREQMRGELKRIQLEWGVTTVYVTHDQAEAMAISDRIAV
                     LNQGEIMQVGTPDDIYEMPRSEFVANFIGRTNLFRGKLDAAVDAGGAGIVRSELGPIR
                     CRFAARSSAGQDVSFVVRPENVVLARAEGAGAPGENDVDGRIDGRVYQGEVAEYSIDL
                     DGRFRLLARAHPGIGLGIGDRVRVRLPAERTIAICA"
     gene            complement(1236..2984)
                     /locus_tag="VHN20_00365"
     CDS             complement(1236..2984)
                     /locus_tag="VHN20_00365"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HEX2724252.1"
                     /translation="MAANMTATCDDVAPLGPAGVKRPTARVSPLVVVLGAILLILILP
                     PTVFLVAASFFTTAPDGSFGEFTLRYYEQLLTGRFFLPSLWNTIVYATGSAAVALVLG
                     TAQALIVERTNTPGRKWVFLGAVISLGVPNVLYVVAWLLILGKAGPVNGFLAWLVGSP
                     QVFLNVYSMWGMILIEGVNFVPLTFLLMSAVLRATDASFEEAAMMSGARPLTAFRTVT
                     LRMGLPGILALLLLVFIRAFESFEVPALVGLAGDINVLTTEIYQRSRSSGSLNFGESG
                     AYSVILLAIVAGLLLWYNQLSRNAHQYQTITGKGYRPRIIDLGRARYFTATILVVLFM
                     LITGLPLGMLVFASLQPFYEGITADSLQRFTLENYTVLLEFGMFRNAIVNTLVLGAAT
                     ATLVVPLTALCAWLAARRQPGAWVLDQIATAPLVFPAIVMSVAFLYIFVNLPIALYGT
                     LTSIVIASAVRYLPYGMRYAYAGVLQIHTDLEDASMTAGARQGSTFIRIVLPLLSAAL
                     ASAWLFVFLLAAQAVSLPLLLVGPGTEIVAVTLFDLWQNGQVTELASMGVLWVVLMTA
                     VSALFYVVARRHQVAV"
     gene            complement(3058..4164)
                     /locus_tag="VHN20_00370"
     CDS             complement(3058..4164)
                     /locus_tag="VHN20_00370"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX2724253.1"
                     /translation="MPHLEVRRRHAGRAILTAAAASLAGLLAIVPASGQSGQELLTYT
                     GADRQQKLLECAKKEGEVVIYSAMIANQALRPITSGFMKKYPVKMTYWRGDSEDIAAK
                     LAAEVRANNVVADVVEGTGVGEAVVEANLVQRYYTPVLSEFPEKYRDPEGYWTPTRLS
                     YFGIAYNTRLVPADKVPKSYEDLLDPQWKGKIAWRIGSSSGTPLFLTNLRLAWGEEKA
                     RAYLRKLAEQKVVNFGSGSARTLVDRVIAGEYAIALNIFAHHPLISKAKGAPVEGLVL
                     EPVPTTTATMLIPKGARHPCSALLLVDYILSKDGQTILAGAEYFPARPDVPPDPSVAK
                     IVPSVAGVAEHFVNPPTLHKNYPVSEAIFQEMFR"
     gene            complement(4151..6319)
                     /locus_tag="VHN20_00375"
     CDS             complement(4151..6319)
                     /locus_tag="VHN20_00375"
                     /inference="COORDINATES: protein motif:HMM:NF024938.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase family protein"
                     /protein_id="HEX2724254.1"
                     /translation="MMLERRRALPIEALLRPRSIALVGVSAKGGSGAKILNSTRRSGF
                     AGPVWPVNPGYAEIGGLPCFRSLGDLPEVPDCVVVSVPAGAVQDVVEEAAKRGVRGAL
                     VVSEGFADAATDEGKERQRRLVTLAERANMALAGPNCMGIASLQNCYAATMADIPEQV
                     IAGGISLVSQSGGLLNAVAELSSNRGIGLNYLVSIGNQAVLDLADYIDFLAHDPTTAV
                     ITCIMEGAKDGRRFRAAIEAAARVKPVIVLKLGRSESGQAATLAHTGTLAGRHEAYAA
                     LFKQNGVALVDSIDELVETAALMERAPLPKGDRVCMLTVSGGATSLIGDLGEKAGVKF
                     PPIEAETNRRLEVILGVERRFGNPLDTVGMPRLRKERNMTAVLTALNEADNIDVIGLV
                     LGMRQDGAASHEEVIEQLAAAAKSATKPLLVVSFISNSLTGRWRDYARQSGLPLVEDL
                     ERGLKAVRHLIDYAACRRKAPARSGDAQSAPTSPVLAGAHAAGVTLTEAESKRILAEA
                     GLPVTREELARTPDDAVRLAAGIGGRVALKIQSRDIPHKSDVGGVFLGASGADDVARA
                     ARQVLDNAAHACPKAVIDGVLVQEMVEDGTEFILGMTYDDQFGPLVVCGAGGVMVELL
                     KDAAVLIPPVTSDDVREMLRGLKASRLLDGFRGAAPRDVEALVDCCVRFARFVAATEG
                     QFAAIDLNPVLVCPRGRGVRIADALIVTQQNREEIRHAAP"
     gene            complement(6327..6785)
                     /locus_tag="VHN20_00380"
     CDS             complement(6327..6785)
                     /locus_tag="VHN20_00380"
                     /inference="COORDINATES: protein motif:HMM:NF013920.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OB-fold domain-containing protein"
                     /protein_id="HEX2724255.1"
                     /translation="MSSEPNVVVVQGDWKKPYPSIDHDNEPFWEGLKAHKFLVWRCKT
                     CGTSYWPKAYCQNHDNEPFAANMTWVESSGRGRIFAFNKHHTAFHPGFKDEIPYYYAL
                     IELDEGPLVSSQLIGDRVPKDVYDIGQKVEVVYEDHPDQGFTLPKFRIVD"
     gene            complement(6782..>7360)
                     /locus_tag="VHN20_00385"
     CDS             complement(6782..>7360)
                     /locus_tag="VHN20_00385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="thiolase family protein"
                     /protein_id="HEX2724256.1"
                     /translation="LAEPYHLLDLSLVSDGAVAFILTTSDRAKDTPKAPAYVLGQGYG
                     EVSAELWWEKKNFTHMAVKPAKEQAFGQAGLTLEDVDCAQLYDCFTAEVLFQLEDYGW
                     CKKGEGGPFVEAGNIAPGGTIPINTSGGLLSCYHLGDLTGLAESVRQLRREGGERQIA
                     DCEVVMTTGHGGELVSPGMCSIHTCTLLGRHH"
BASE COUNT         1252 a         2403 c         2507 g         1198 t
ORIGIN      
        1 agcacgtcag cggaaacggt gtttgccatg agacctccgg ggacagccgc ttgttgcgac
       61 aagcgcgccg tcctgacaag gcctcgttct gcaacccggc gggctgtcag gcgcagatgg
      121 cgatggtgcg ctcggcaggg aggcgcacgc gcacgcgatc gccgataccg agcccgatcc
      181 cgggatgagc ccgcgccaga agccggaagc gcccatcgag atcgatgctg tattcggcga
      241 cttcgccctg gtagacgcgg ccgtcgatgc gcccgtcgac gtcgttttcg cccggggcgc
      301 cggcgccctc ggcgcgcgcg agcacgacgt tctcgggccg caccacgaac gacacgtcct
      361 gaccggcgct cgaccgtgcc gcgaagcggc aacggatcgg cccgagctcg gaccgcacaa
      421 tcccagcgcc gcccgcgtcg acggcggcgt cgagcttacc ccggaacagg ttcgtacggc
      481 cgatgaaatt ggcaacaaac tccgagcgtg gcatctcgta gatatcgtcc ggcgtgccga
      541 cctgcatgat ctcgccctga ttgagcacgg cgatgcggtc ggagatggcc atggcctccg
      601 cctggtcgtg ggtcacgtaa actgtcgtga cgccccattc gagctggatg cgtttgagct
      661 cgccgcgcat ctgctcgcgc agctgcgcat cgagattgct caacggctcg tcaagcagca
      721 gcagctttgg ctcgcgcacg agtgcgcggg cgagcgcaag ccgttgctgc tggccgccac
      781 taagctgggt cgcggagcgg tccttgaact tctccaggcc gacggtggcg agaacccgat
      841 cgacgcggct gacgatgtcg gcgcgcgtgt agcgctgccg ccgggagacg cgcagcggat
      901 aggcggcgtt ctcgaacacg ctcatatggg gccagatggc gtaggattgg aacaccatgc
      961 cgatgtctcg gtcgtacatc ggcaccgtgc ggccgctggc ggcgtcatag atgggcgtct
     1021 ggccgagcgt gatgaggccg cggtcgggct gctcgagccc ggcgacgcag cgcaaggtcg
     1081 tggtcttgcc gcagcccgag ggtccgagca gcgtgaacat ctcgccgggc ttgacctcga
     1141 agccgacccc gaaaacgccg ccggccggct ggcttgcgtc cgtggcgaag cgtttgacca
     1201 gattttcgac gcgcagcatg ggatctcgct ccggttcaga ccgcgacctg atgacgtctg
     1261 gcgaccacgt agaacaatgc gctgacggcg gtcatcagca cgacccaaag gacccccatc
     1321 gacgcgagct ccgtcacctg cccgttctgc caaaggtcga acagcgtcac cgcgacgatc
     1381 tcggtcccgg gcccgaccag caggagcggc agcgagaccg cctgcgcggc gagaaggaac
     1441 acgaaaagcc aggcgctggc gagcgcggcg gacaggagcg gcagcacgat gcggatgaat
     1501 gtgctgccct ggcgcgcgcc ggcggtcatc gaggcatcct cgaggtcggt atggatctgc
     1561 agcacgccgg cataggcgta acgcatcccg taggggaggt agcgcacggc cgacgcgatg
     1621 acgatcgacg tgagcgttcc gtagagcgcg atcggcaggt tgacgaagat gtataagaac
     1681 gccacgctca tcacgatcgc cggaaagacg agcggcgcgg tcgcgatctg gtccaggacc
     1741 caggcgccgg gctgccgccg cgccgcgagc catgcgcaca gcgccgtgag aggcacgacc
     1801 agcgtggcgg tcgcggcgcc gagcacgagc gtgttgacga tggcgttgcg gaacatgccg
     1861 aactcgagca gcaccgtgta gttctcgagg gtgaagcgct gcagcgagtc ggcggtgatg
     1921 ccctcgtaga agggctgcag ggatgcgaac acgagcatgc caagcggcag gcccgtgatc
     1981 agcatgaaca gaacgacgag gatagttgcg gtgaagtagc gcgcccggcc gagatcgatg
     2041 atgcgcggcc ggtatccctt gccggtgatc gtctgatact gatgcgcgtt acgcgacagc
     2101 tggttgtacc agagcagcag cccggccacg atggccagca ggatcaccga gtaggcgccg
     2161 gattcgccga agttcaggga gcccgagctg cgcgagcgct ggtagatctc ggtggtcagc
     2221 acgttgatgt cgccggcgag gcccaccagc gccgggacct cgaacgactc gaaggcgcgg
     2281 atgaacacca gcagcagcag cgccaggatg cccggcagcc ccatgcgcaa cgtcaccgtg
     2341 cggaacgcag tgagcggccg ggccccgctc atcatcgccg cctcctcgaa cgaggcgtcg
     2401 gtggcgcgca gcaccgccga catcaggagg aaggtcaggg gcacgaagtt gacgccctcg
     2461 atcaggatca tgccccacat cgagtagacg ttgagaaaga cctgcgggct gccgaccagc
     2521 catgccagga agccgttgac gggacccgcc ttgccgagaa tcagcagcca ggcgaccaca
     2581 tagagcacgt tcggaacgcc gagcgagatc acggcgccga ggaacaccca cttgcggcca
     2641 ggcgtgttgg tccgctcgac gatcagcgcc tgcgccgtgc cgaggaccag cgccacggcc
     2701 gccgatccgg tcgcgtagac gatggtgttc cacaagctgg gcagaaagaa ccgcccggtg
     2761 agcaactgct cgtaatagcg cagcgtgaac tcgccgaagc tgccgtccgg cgcggtcgtg
     2821 aagaagctgg ccgccaccag gaacacggtc ggcggcagga tcaggatcag caggattgcg
     2881 ccgagcacca cgaccagggg cgacacccgc gcggtcgggc gcttcacgcc cgccgggcca
     2941 agaggggcga cgtcgtcgca ggtcgctgtc atgttcgccg ccatgtgatc cgctccccag
     3001 cgcccgttct ccgtgcgccc ttccggcgaa gtggtcgcca cttcgccgga tcatgatcta
     3061 gcgaaacatc tcctggaaga tcgcttccga gaccggatag ttcttgtgca gggtcggcgg
     3121 gttgacgaaa tgctcggcaa cgccggcaac cgacggcacg atcttggcga cggaggggtc
     3181 aggcggcacg tcgggacgtg ccgggaaata ctcggcgccc gccaggatcg tctggccgtc
     3241 ctttgacagg atgtagtcga cgagcagcag ggcagagcac gggtgccgcg cgcctttggg
     3301 gatcagcatt gtcgcggtgg tcgtcggcac gggctcgagc acgaggccct cgaccggcgc
     3361 ccctttggct ttgctgatca gcgggtgatg cgcgaagatg ttgagcgcga tcgcgtattc
     3421 gccggcgatg acccggtcga cgagcgtgcg cgcgctgccc gagccgaagt tcacgacctt
     3481 ctgctcggcg agcttgcgca gatacgcccg cgctttttcc tcgccccatg ccaggcgcag
     3541 gttggtgagg aagagcggcg tgccgctcga gctgccgatg cgccacgcga tcttgccctt
     3601 ccattgcgga tcgagcaggt cttcgtagct cttcggcacc ttgtcggcgg gcaccagtct
     3661 cgtgttgtag gcgatgccga aatagctgag ccgggtcggc gtccagtagc cctcggggtc
     3721 gcggtatttc tctggaaact cggacagaac aggcgtgtag tagcgctgca cgaggttggc
     3781 ttcgacgaca gcctcgccga cgccggtgcc ctcgaccaca tcggcgacca cgttgttggc
     3841 gcgcacctcc gccgcgagct tggccgcgat gtcttcggaa tcgccacgcc agtaggtcat
     3901 cttgaccgga tacttcttca tgaagccgga cgtgatcggg cgcagggcct ggttggcgat
     3961 catcgccgag tagatgacga cctcaccttc tttcttggcg cattcgagca gcttctgctg
     4021 acgatcagcc ccggtatagg tgagcagctc ctgaccgctc tgtccgctcg cagggacgat
     4081 ggcgagcagg ccggccaggc tggcggcggc cgccgtcaga atggcgcgac cggcgtggcg
     4141 gcgccggacc tcaaggtgcg gcatggcgta tttcctcccg gttttgttgt gtcacgatta
     4201 gcgcatcggc gatgcggact ccacggcccc gcgggcagac caggacgggg ttcaggtcga
     4261 tcgccgcgaa ctggccctcg gtcgccgcga cgaaccgtgc gaagcgcacg cagcaatcga
     4321 cgagcgcctc gacgtcgcgt ggggctgccc cgcgaaaacc gtcgagcagc ctggacgctt
     4381 tgaggccccg cagcatctcc ctcacgtcgt ccgacgtcac cggcgggatc agcactgcgg
     4441 cgtccttgag caattcgacc atcacgccgc ctgcgccaca tacgacgagc ggcccgaact
     4501 ggtcgtcata ggtcatgccc aggatgaact cggtcccgtc ctcgaccatc tcctggacga
     4561 ggacgccatc gatgacggcc ttcgggcagg cgtgcgccgc attgtcgagc acctgacggg
     4621 cggcgcgcgc gacatcgtcc gctcccgagg ctccgagaaa aacgccgccg acgtcgctct
     4681 tatgggggat gtcacgcgac tggattttca gcgcgacgcg gccgccgatc ccggcggcca
     4741 ggcgcacggc gtcatccggg gtgcgggcga gttcttcgcg cgtcaccggc agcccggctt
     4801 cagcgaggat gcgtttgctc tcggcctcgg tcagcgtcac gccggcggca tgcgccccgg
     4861 caaggacagg tgatgtcggt gcagactgcg cgtcgccgga tcgcgccggc gccttgcgcc
     4921 gacaggcggc atagtcgatc aggtgccgca ccgccttcag cccgcgctca aggtcctcga
     4981 cgagcggcag accggattgg cgcgcgtaat cgcgccatct ccccgtcagg ctgtttgaga
     5041 tgaaggagac caccagcagg ggcttcgtgg cgctcttggc ggcggccgcg agctgctcga
     5101 tcacttcctc gtgcgacgcc gcgccatcct ggcgcattcc gagaaccagc ccgatcacgt
     5161 cgatgttgtc ggcctcgttc agcgccgtca ggacggcggt catgttgcgc tccttgcgca
     5221 gccgcggcat gccgaccgtg tcgaggggat tgccaaagcg gcgctcgacg ccgaggatca
     5281 cctccagacg ccggttggtc tcggcttcga tgggcggaaa tttcacaccg gctttttcgc
     5341 cgaggtcgcc gatcagcgat gtcgcgccgc cggacaccgt gagcatgcac acgcggtcgc
     5401 ccttcggcag cggcgcgcgt tccatgagcg cggcggtctc caccagctca tcgatgctgt
     5461 caacgagcgc gacgccgttc tgcttgaaga gggccgcgta ggcttcatgc cggcccgcta
     5521 gcgtgccggt atgcgcgagg gtcgccgcct ggcccgactc gctgcgcccg agcttgagaa
     5581 cgatcacagg cttgacgcgc gccgctgcct cgatggcggc gcggaacctt cgcccgtcct
     5641 tggcgccttc catgatgcag gtaatcacgg cggtcgttgg gtcatgcgcg agaaagtcga
     5701 tgtaatcggc gaggtcgagg accgcctggt tgccgatcga gacgagataa ttgaggccga
     5761 tgccgcgatt gctgctgagc tcggcgacgg cgttgagcag cccaccgctt tgcgagacga
     5821 gcgagatgcc accggcgatg acctgctcgg gaatgtcggc catggtcgcc gcgtagcagt
     5881 tctgcaggct ggcgatgccc atgcagttcg ggccggcgag cgccatgttg gcgcgctcgg
     5941 caagcgtcac cagccgccgc tgccgttcct tgccctcgtc ggtggcggcg tcggcgaatc
     6001 cttccgacac cacgagtgcg ccgcgcacgc cgcgcttggc cgcttcctcg acgacgtcct
     6061 ggacggcgcc ggccggcacg gacaccacga cgcaatccgg tacttccggc aggtcgccca
     6121 aggagcggaa gcagggcagg ccgccgatct cggcatagcc aggattgacc ggccacaccg
     6181 gcccggcgaa tccggaccgg cgcgtcgagt tcaggatctt ggcgccggag ccgcctttcg
     6241 cggagacgcc gacgagggcg atcgatcgcg gccgcaacag ggcctcgatc ggcaacgcgc
     6301 ggcgccgctc gagcatcatg acgccgtcag tcgacgatgc ggaacttggg cagcgtgaag
     6361 ccttgatcgg ggtggtcctc gtagaccacc tcaaccttct gcccgatgtc gtagacgtcc
     6421 ttcggaacgc ggtcgccgat cagctgcgag ctgaccagcg gcccttcgtc gagctcgatt
     6481 agcgcgtagt aataggggat ctcgtccttg aagcccgggt ggaacgccgt gtggtgcttg
     6541 ttgaacgcga agatgcgtcc gcgtccgctc gactcgaccc aggtcatgtt ggccgcgaag
     6601 ggctcgttgt cgtggttctg gcaataggct ttcggccagt aagaggtacc gcaggtcttg
     6661 cagcgccaga ccaggaactt gtgcgccttc agcccctccc agaacggctc gttgtcgtgg
     6721 tcgatgctcg gatacggctt cttccagtcg ccctggacga cgaccacgtt cggctcgctg
     6781 ctcaatgatg cctccccaga agcgtgcagg tgtgtatgga gcacatgccg ggggagacga
     6841 gctcgcctcc gtgcccggtg gtcatgacga cctcgcaatc ggcgatctgg cgctcgccac
     6901 cctcgcggcg cagttggcgt acggactcgg caagaccggt gagatcgccg aggtggtagc
     6961 aggagagcag gccgccgctg gtgttgatcg ggatggtgcc gcccggcgcg atgttgccgg
     7021 cctcgacgaa ggggccgcct tcgcccttct tgcaccagcc gtaatcctcg agctggaaga
     7081 gcacctcggc ggtgaaacaa tcgtagagct gggcgcaatc gacgtcctcg agcgtcagcc
     7141 ccgcctgccc gaaagcctgc tccttggcag gcttcaccgc catgtgcgtg aaattcttct
     7201 tctcccacca gagctcggcc gagacctcgc catagccctg gcccagcacg taggcaggtg
     7261 ccttgggcgt gtccttggcg cggtccgacg tggtcaggat gaacgcgacg gcaccgtccg
     7321 agacgaggct caggtcgagt agatgatatg gctcggcaag
//
LOCUS       DATAIQ010000026         3980 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_93270, whole genome shotgun sequence.
ACCESSION   DATAIQ010000026 DATAIQ010000000
VERSION     DATAIQ010000026.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3980)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3980)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3980
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_93270"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            218..691
                     /locus_tag="VHN20_00390"
     CDS             218..691
                     /locus_tag="VHN20_00390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724257.1"
                     /translation="MDQARRPVLRDPGNDPARRPKAPGAKTGLEGLDNVLRLAFASKN
                     EEAELFGDRNGPSERDWVKTLYLVDQAADALTAAEDRIRELEARNEEIVQRAGEELKA
                     AHTAIQAAETRALRAETRAREAEERSRTDREWLMRIHDAMEQLAVPRGLGGDPAA"
     gene            complement(1034..1684)
                     /locus_tag="VHN20_00395"
     CDS             complement(1034..1684)
                     /locus_tag="VHN20_00395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018329710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HEX2724258.1"
                     /translation="MDAYGLLIALAQVIMIDLILAGDNAIVIGLAAAGLPPTQRTKAI
                     LVGILAATGLRIVFAALTTQLLQIVGLLLAGGLLLLWVCWKMWRELHTGRKEEFAATE
                     ALDRHPDTYNVGIGGIPQKSFAQAASQIVVADVSMSLDNVLAVAGAAREHPQVLVFGL
                     VLSIALMGVAASFIARLLHKHHWIAYVGLAVILYVAVEMTWRGAREVWPLMNEVIT"
     gene            2031..2915
                     /locus_tag="VHN20_00400"
     CDS             2031..2915
                     /locus_tag="VHN20_00400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724259.1"
                     /translation="MTVRAVAKEAGPVPRGAFRLAHPEAGPIEALACCLVGGPSQAPA
                     TAMAHDLAQSHGASLTAVAAVDPYIRERRSRLKNFCQTVFTNACHDVMRRSAHRAIDD
                     FERQNSDRRVEARRIVRGADWRSLRDAVSGHDLAVAPAWVGIDGLDATPENEVAPALA
                     RNAGIPVLRVASLPLDRGKVLFLIDGASQHCRLARVYMNLGLWRTARIVILPIGGGGS
                     SVEVACEERKVLRRHDHNAAVLPPLAADAVPDLEKLTRQFHVAAVDRSLGRSGLFASL
                     RNCAFRAVTSRVPAILFA"
     gene            complement(3081..3344)
                     /locus_tag="VHN20_00405"
     CDS             complement(3081..3344)
                     /locus_tag="VHN20_00405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006019199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724260.1"
                     /translation="MARLLMTTAAVLVAGAAFAQTSTTTTTTTGGSTTTTTEQYYVVR
                     DPSTKRCTVTATKPSGGTTVVVGDTIYKSRSEAETAVTKVCTN"
     gene            complement(3472..>3980)
                     /locus_tag="VHN20_00410"
     CDS             complement(3472..>3980)
                     /locus_tag="VHN20_00410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012752296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="M24 family metallopeptidase"
                     /protein_id="HEX2724261.1"
                     /translation="RRIQRGDLVNIDVSAEKDGFFADTGASFVVPPVARLIERLCRDG
                     RRAMWTGLRQVGAGKPVAGIGRAIGTFAQKNGYTLVQNLSSHGVGLSLHEEPTEIATW
                     PDASERRVMTDGLVFTVEPFLSLGAQLAEDGDDPWTLYSSPRAPTVQYEHTVVATRNG
                     PLIVTMPG"
BASE COUNT          661 a         1332 c         1352 g          635 t
ORIGIN      
        1 tttgctggaa atctggtgag ccgcggcggc gccggccgcc cgcgaagcgg ggcgccttgc
       61 tcccgttatg ctctcgctgc caagtcaaaa gtggcgggcg ttaacagctt gttaaccagg
      121 cctaaccgtc tactaacgac agccgccagc gggtaaagtt ctctgattcg cgcgggacgg
      181 acgcgaggtc gtcgggcttt cggagggatt aattttcatg gaccaggcgc gcagacctgt
      241 attgcgggat cccggcaacg acccggcccg gcgccccaag gcgcccggcg ccaagaccgg
      301 cctcgaaggg ctggacaacg tcctgcgcct cgctttcgcg tccaagaacg aggaggcgga
      361 gctcttcggc gaccgcaacg gcccgtcgga gcgcgactgg gtcaaaaccc tctatctcgt
      421 cgatcaggcc gccgacgcgc tcacggctgc cgaggaccgg atccgcgagc tcgaggcccg
      481 caacgaggag atcgtgcagc gggccggcga ggaactgaag gccgcccaca ccgccatcca
      541 ggccgccgag acccgggccc tgcgcgccga gacgcgcgcc cgcgaggccg aggagcggtc
      601 caggaccgac cgggaatggc tgatgcgcat ccatgacgcc atggaacagc tcgccgtgcc
      661 gcgcgggctt gggggcgacc cggctgcata gctcggccgc caccggcaag gcccgggggt
      721 ggcctggtta atgaaggaat aacagccagt aggtgccggc cagcggcgca aacacgccca
      781 ggaccatcgg ccaaacattc gctgccactg acgcgctccc ctgctctcgt ggttgcgcgc
      841 acttatgccg gcactttgtt gcggccggat ttcttgaagt ccgacaaatt gttgcatctg
      901 ccggcacgag cgtgggcagt agccctgggg ttaccggccg cttaccgccc gcggcacaaa
      961 tgtatcgggt cgttccgtgg ctgggcccgg ctgcccgtcg agcacgttcc agcccgcgac
     1021 cggcaacggc cggttacgtg atgacctcgt tcatcagcgg ccatacctcg cgggcaccgc
     1081 gccaggtcat ttccaccgcg acatagagga tcacggccaa gccgacgtaa gcgatccagt
     1141 gatgcttgtg gagcaggcgc gcgatgaagc tggccgccac gcccatgagg gcgatcgaca
     1201 ggaccaggcc gaagacgagg acctgcgggt gctcgcgggc ggcgccggcc acggcgagca
     1261 cgttgtcgag cgacatggac acgtccgcga ccacgatttg cgacgcggcc tgggcgaagg
     1321 atttttgcgg aatgccgccg atgccgacgt tgtaggtgtc gggatgcctg tcgagggctt
     1381 cggtggcggc gaactcctcc ttccggccgg tgtgcagctc gcgccacatc ttccagcaca
     1441 cccagagcag cagaaggccg ccggccaaaa gcaggccgac aatctgaagc agctgggtgg
     1501 tcagggcggc gaacacgatg cgcagcccgg tggcggcgag gatgccgacg aggatggcct
     1561 tggtgcgctg ggtgggcggc aggccggcgg ccgcgagccc gatgacgatg gcgttatcac
     1621 cggccaggat caggtcgatc atgatgacct gggcgagagc gatcagcagc ccgtaagcgt
     1681 ccatcgcgag agctcacaat tcgtcagcgg ccggcgacga ggcacgagcg gctacgagag
     1741 tgacttgata tgcattgttg aatttagtaa ctttgaaacg tgcggcaacg caatagggtt
     1801 cccggcaatc cgcagcgccg gagcgcaatg gtgccgtcct gttcgaacca gcgggctcaa
     1861 gctggagcga cgcggcaccc gcagcccgcg gcggggtcgc ctttcctcgc cctcacctcg
     1921 caagctgcgc cagacccgcg gtcgcaccac aaaccggccc gtcggaattc gcgatccgtt
     1981 cgccccccaa gcggcagggc tgcacctgcg gccggccccg gcgactggtc atgaccgtgc
     2041 gagccgtcgc gaaagaagcc ggcccggttc cgagaggagc gtttcgcctc gcgcaccccg
     2101 aagcgggtcc gatcgaggct ctcgcgtgct gcctggtcgg cggcccctcg caagcgccgg
     2161 ccaccgcgat ggcgcacgat ctcgcgcagt cgcatggcgc ctctctgacc gccgtggctg
     2221 cggtcgaccc gtacattcgt gagcgccggt cgcggctgaa aaacttctgc cagaccgttt
     2281 tcacgaacgc ctgtcacgat gtcatgcggc gctccgcgca ccgggcgatc gacgatttcg
     2341 agaggcagaa ctcagaccgt cgggtcgagg cgaggcggat cgtccgcggg gccgattggc
     2401 ggtccctacg ggacgccgtt tccggacatg atctcgccgt tgctcccgcc tgggtcggaa
     2461 tcgacggtct cgacgccacg cccgagaacg aggtcgcgcc cgctctcgca aggaacgcag
     2521 gtatccccgt cctgcgcgtc gccagcctgc cgctcgaccg gggcaaggtg ctcttcctga
     2581 tcgacggcgc gtcgcagcat tgtcggctgg cgcgcgtcta catgaatctc ggactttggc
     2641 ggacggcccg gatcgtgatc ctcccgatcg gaggcggcgg ctcatcggtc gaagtcgcgt
     2701 gcgaggagcg taaggtcctt cgcagacacg accacaacgc ggcagtgctg ccgccgctcg
     2761 ccgccgacgc agtgcctgat ctggagaaac tcacccgcca gttccacgtc gccgccgtgg
     2821 atcgcagcct gggccgcagt ggcctgttcg cttcgcttcg caactgcgcc ttccgggccg
     2881 tgaccagccg cgtgccggcg atccttttcg cctgagatgc gatgatgacg ccgtgaacgg
     2941 gccgcggcgg gggcggtgcc agctggaacc ggtcagcgac ggcgagtgcc tgcccgctcg
     3001 gaagtcgccg gcatgaagcg caaggctcgc cgcgcttcgg cagcgcggca gggccgcaac
     3061 ggccccgccg cctgcttcgt tcagttcgtg cagaccttcg ttaccgccgt ctcggcctcc
     3121 gagcgcgact tgtaaatcgt gtcgccgacg accaccgtcg tcccgccgct cggcttcgtc
     3181 gcggtgaccg tgcaccgctt cgtcgacggg tcgcggacga cgtaatactg ctcggtggtc
     3241 gtggtcgtgg acccgcccgt cgtcgtcgtc gtggtggtcg acgtttgggc gaaagccgcg
     3301 cccgcgacga gcacagcagc agtggtcata agaagccttg ccatggatgt tcctttgcaa
     3361 agaaatagcc gctgtgaggc aacgtcaaaa gcttgaccgt gttccacgcc cacaggcggt
     3421 ttttggctca gcgcctaaat ccccgggggg gcggtctcgc cggagcaggc actacccggg
     3481 catcgtgacg atcagcggac cgtttcgggt cgccaccacg gtatgttcgt attgcaccgt
     3541 cggggcgcga gggctgctgt agagcgtcca tggatcatcg ccgtcctcgg ccagttgcgc
     3601 gcccagcgac aggaacggct cgacagtgaa gacgaggccg tcggtcatga cgcggcgctc
     3661 ggacgcgtcg ggccacgtcg cgatctcggt cggctcctca tggagcgaca ggccgacgcc
     3721 gtggctcgaa aggttttgga ccagcgtgta gccgttcttt tgcgcaaagg tgccgatggc
     3781 acggccgatg ccggcaaccg gcttgccggc tccgacctgc cgcaggccgg tccacatggc
     3841 gcgccggccg tccctgcaca gacgctcgat caagcgggcc acgggcggaa cgacgaacga
     3901 ggcgcccgtg tccgcgaaga agccgtcctt ctcggcggag acgtcgatgt tgacgaggtc
     3961 accacgctgg atgcgccgct
//
LOCUS       DATAIQ010000027         1904 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_278151, whole genome shotgun sequence.
ACCESSION   DATAIQ010000027 DATAIQ010000000
VERSION     DATAIQ010000027.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1904)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1904)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1904
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_278151"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..482
                     /locus_tag="VHN20_00415"
     CDS             <1..482
                     /locus_tag="VHN20_00415"
                     /inference="COORDINATES: protein motif:HMM:NF013429.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TIM barrel protein"
                     /protein_id="HEX2724262.1"
                     /translation="YHFTSDKKMRMEAGLERLKRLTGQAENLGVTLLLENMNWEPDDA
                     EVHYLAHNVEETRFYFDRLDSPNLRWAFTANHAHIVEDGVDAFIEAFDIRRCDEVRIA
                     DCWRNGKEEHLLPGKGDFDFPGLFRKLDARGFAGHYMAAFGTLQDMVEGREKLARMG"
     gene            complement(519..1502)
                     /locus_tag="VHN20_00420"
     CDS             complement(519..1502)
                     /locus_tag="VHN20_00420"
                     /inference="COORDINATES: protein motif:HMM:NF025091.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase/PEP mutase family protein"
                     /protein_id="HEX2724263.1"
                     /translation="MRLRPQVIQGKASTELRRQLREDERPLISIGGATPHHAQLAEAT
                     GFKLFGLSGSQASAHILGLPDAGLMTMSEVVDNARRICRAVSIPVIADCETGFGNVLN
                     TTRAISELIDAGVAGLFIEDQVFPKRCGFTNGVQIIPAAEAAGKLRAAIAVRDELDPD
                     VVILARTDSRACVGGSVDEVLRRCEAYLAAGVDMMMITALQSREEIRRVREAFPDALL
                     KLNISINPPLTEREFRDFRISIYDISISKIAQMMMFDFLTKLRRDGIAAFNEFTQSRK
                     DHPVGMFGFLELTGFPKLLEIEREFLGAEALGKYEESIGLFDPRAKKAAGA"
     gene            complement(1662..>1904)
                     /locus_tag="VHN20_00425"
     CDS             complement(1662..>1904)
                     /locus_tag="VHN20_00425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724264.1"
                     /translation="ESDLHRVAGDIALMSAEPDTVTAEEHFERALAVARQQQARSWEL
                     HAAMAIARLWRMQGKLQQARDLLAPIEHWFEVCRRS"
BASE COUNT          315 a          639 c          626 g          324 t
ORIGIN      
        1 gctaccattt cacgtccgac aagaagatgc gcatggaggc gggcctcgag cgcctgaagc
       61 gcctgaccgg ccaggccgag aatctcggcg tcaccctgct tctcgagaac atgaactggg
      121 aaccggacga cgccgaggtc cattacctcg cgcacaacgt cgaggagacg cgcttctatt
      181 tcgaccgcct cgactcgccg aacctgcgct gggccttcac ggccaaccac gcccacatcg
      241 tcgaggacgg cgtcgacgcc ttcatcgagg ccttcgacat ccggcgctgc gacgaggtgc
      301 gcatcgccga ttgctggcgc aacggcaagg aggagcatct gctgcccggc aagggcgact
      361 tcgacttccc gggcctgttc cgcaagctcg atgcgcgcgg cttcgccggc cactacatgg
      421 ccgcgttcgg cacgctgcag gacatggtcg agggccgcga gaagctcgca cggatgggat
      481 gaagccgtgg ctcgtgtccc gcaacgcggt ccctgcctct acgcgcccgc cgccttcttc
      541 gcccgtggat cgaacaggcc gatcgactcc tcgtatttgc cgagcgcctc ggccccgagg
      601 aactcgcgtt cgatctccag gagcttcgga aacccggtca gctcgaggaa gccgaacatt
      661 ccgacgggat gatccttgcg cgattgcgtg aactcgttga aggcggcgat gccgtcgcgc
      721 cgcagcttgg tcaggaaatc gaacatcatc atctgcgcga tcttcgagat cgagatgtcg
      781 tagatcgaga tgcggaagtc gcggaactcg cgctcggtga gcggcgggtt gatgctgatg
      841 ttgagcttga gcagcgcgtc gggaaaggcc tcgcgcaccc ggcggatctc ctcgcgggac
      901 tgcagggccg tgatcatcat catatcgacg ccggcggcga gataggcttc gcagcggcgc
      961 agcacctcgt cgacgctgcc gccgacgcag gcgcgcgaat ccgtgcgcgc caggatgacc
     1021 acgtccggat cgagctcgtc gcgcacggcg atggcggccc gcagcttgcc ggcggcttcg
     1081 gcggcgggga tgatctgcac gccgttggtg aagccgcagc gcttgggaaa gacctgatcc
     1141 tcgatgaaca ggccggcgac accggcgtcg atcagctcgc tgatcgcgcg ggtggtgttg
     1201 aggacgttgc cgaatcccgt ctcgcagtcg gcgatgaccg ggatggacac ggcgcggcag
     1261 atccggcgcg cgttgtcgac gacttccgac atggtcataa ggccggcatc gggcaggcca
     1321 aggatgtgcg ccgatgcctg cgatcctgac agcccgaaca gcttgaagcc cgtggcctcg
     1381 gcaagctgcg catgatgcgg cgtcgctccg ccgatcgaga tgagtgggcg ctcgtcctcg
     1441 cgcagctgac gacgcagctc cgtgctcgcc ttgccctgaa tgacctgtgg ccttagccgc
     1501 atcgtgcttt cccccccact gctgtcagcc ggtcgcctaa gacgccgggg ctgctccccg
     1561 cgtctgctcc ggccgttttt tcgtcggcag cgtaacgtcg gtcaggcaca agtcaacgag
     1621 gctgcatcgt cagccgggca ggcgccgcga cgtgtctccc gtcaggagcg tcggcacacc
     1681 tcgaaccagt gttcgatcgg ggcgagcagg tcgcgcgcct gctgcaactt cccttgcatg
     1741 cgccacagcc gcgcgatcgc catcgcggca tgcagttccc aggatctggc ctgctgctgc
     1801 cgcgccaccg cgagcgcccg ctcgaaatgc tcctccgcgg taacggtgtc gggttcggcc
     1861 gacatcagcg cgatgtcgcc ggcgacacga tgcaggtcgg actc
//
LOCUS       DATAIQ010000028         1656 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_231268, whole genome shotgun sequence.
ACCESSION   DATAIQ010000028 DATAIQ010000000
VERSION     DATAIQ010000028.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1656)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1656)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1656
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_231268"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(71..1141)
                     /locus_tag="VHN20_00430"
                     /pseudo
     CDS             complement(71..1141)
                     /locus_tag="VHN20_00430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011511750.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="FHIPEP family type III secretion protein"
BASE COUNT          274 a          555 c          571 g          256 t
ORIGIN      
        1 cacggcgctg cggcgccagc tagccggcga gctcgggttc gtgatgccat cggtccgcat
       61 cctggacgac gtccagcttg agcacgtccg cgatcgactc ttccttgggc gcgccgggcg
      121 cgcccccctc catcggcgtg ccttcgggcg tgatgccggc agcggcgcgg gccttgttct
      181 gctggtcgat cttgcgcgcc agatacgccg ccccgccggc gagggtcagg aagggcagca
      241 tgggaatgcc gggcaggatg gcgatgaggc ccatgacggc cgccgacatg ccgagcgcct
      301 tgggatagtt cgagagctgc ttgcccatgg ccttgtcggc ggcgccgcgc acgcccgcct
      361 tcgacacgag gaggcccgcc gccgtcgaca cgatcagcgc cggcacctgg ctgacgaggc
      421 cgtcgccgca ggtcatcaac gtgtaggtgc gggctgcgtc gccgaagccc atgccctgct
      481 gggcgacgcc gatgatgatg cccccgatga cgttgatgaa ggtgatgagc agcgccgcga
      541 tggcgtcgcc gcgcacgaat ttcgaggcgc cgtccatggc gccgtagaac gacgattcgt
      601 cctcgagcgc cttgcgccgc tccttggcgg ccgtctcgtc gatcagcccc gccgagagat
      661 cggcgtcgat ggccatctgc ttgcccggca tggcgtcgag ggtgaaacgg gccgccacct
      721 cggcgatgcg cccggagccc ttcgtgatca cgacgaagtt cacgatgatc aggatcgcga
      781 acacgattac gccgatcacg aagttgcccg acatcacgaa gttgccgaac gcctcgatga
      841 cgtggcccgc ggcggccgtg ccctcgtgcc cgtgcgccag aatcaggcgc gtcgaggcga
      901 ggttgagggc aagccgcagc atggtcgcga cgagaagcac ggtcgggaag accgagaatt
      961 cgagcggctc ctcgatgaac agcgaggtca tcaggagcag cacggagatg atgatcgaga
     1021 cggcgagcag caggtcgagc aacagcggcg gcagagggaa gacgagcacc acaaggatgc
     1081 ccatcacgcc gaaggcgagg aacaggtcgc tgcgcttggc gagggcgccc atgtcgccca
     1141 tggtcggcag ggcgagcccg ccaatgctga cgttgccgcc gccgaaccga cgcgcgccgg
     1201 cctgcgccgt cgcgcccgcc gtcgcggctg gttgcacccc ggccaccgat cctatcggtg
     1261 cagccatcgc cgccgcctcg ttcatgaacg ccccgaccct gccttgcgcc tcttaatcgg
     1321 caagttttgc cgagtgcatg gttagcagcc ggttaattca ggcgaagacg agcggggcgc
     1381 gtgctgtgcc tgccgtgcac atgcatgccc tggtgagtgg taaggcagcg gccatcctgc
     1441 acgtaatcga cgctcgtgag gccggttgag cgcggcgcga ccggccgcga tgccgcaacg
     1501 attcgcatga atccgacaag gccggcggag ccatgaggcc tgccatgtgc cgaggccggc
     1561 cgctctgtca taacctatcc gtcggtcccc tctgcagggg atcgcgttcc gccagcgccg
     1621 atcaaaacgg ccggctgcgc gttatccgtc ggtcgt
//
LOCUS       DATAIQ010000029         1739 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_231276, whole genome shotgun sequence.
ACCESSION   DATAIQ010000029 DATAIQ010000000
VERSION     DATAIQ010000029.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1739)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1739)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1739
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_231276"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..196)
                     /locus_tag="VHN20_00435"
     CDS             complement(<1..196)
                     /locus_tag="VHN20_00435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724265.1"
                     /translation="MLTARRSLSKTIGLILLSFAFAVGGLAMALHWFPVKPGSFAEFM
                     GWVTLLLFGGGGIYSLKFLFE"
     gene            complement(221..>1739)
                     /locus_tag="VHN20_00440"
     CDS             complement(221..>1739)
                     /locus_tag="VHN20_00440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF6537 domain-containing protein"
                     /protein_id="HEX2724266.1"
                     /translation="RKRQIDQSSCNKDFSCLRGFCPSFVTVHGAKPKRAMPETVSTEG
                     VELSALPEPALPPIDRTYNIIVTGVGGTGVVTIGAILGMAAHLEGKGCGMIDMAGLAQ
                     KGGAVYSHVRLANTPDDIHAIRVSAAAAHLILGCDLVVTGTKRVLASVKDGQTALVVN
                     TAEVLPGDFTRDADFSLPAERIKRAIVSAAGREHVAFVNATAIATAILGNAIAANMFM
                     LGYACQKGYVPLSPASIEQAIALNGEAVDMNRDAFAWGRRAALEPDRVAEMMRQLAAP
                     MPSRQLSGTLDEVIARRVAFLADYQSRRYAARYRSAIERVRAREAEAVPNSTALTEAV
                     ARNLFKLMAYKDEYEVARLYTNGHFAKQVEAAFEGDNLRYEFHLAPPLLARKDPATGL
                     PRKMSFGPWMMKAFAVLAKLRTLRGTPLDVFGYTHERRTERQLIRAYDKLLAEILDKL
                     APSNHAVAIGLASIPGKIRGFGHIKARHLEAAKKEEAELLSRFRAREAVLAVAAE"
BASE COUNT          287 a          565 c          595 g          292 t
ORIGIN      
        1 gctcgaacag aaatttcagc gagtaaatgc cgccgccacc gaacaagagc agagtcaccc
       61 agcccatgaa ttcggcgaaa cttccgggct tcacgggaaa ccaatgcagc gccatcgcaa
      121 ggccgccgac cgcaaaggcg aaagagagca gaatcaggcc aatggtcttc gaaagcgatc
      181 gcctcgcggt caacactgaa gccccctggt tcgttgccgc tcactccgcc gccacggcca
      241 atactgcctc acgcgcgcgg aagcgcgaga gcagctccgc ctcttccttc ttggcggctt
      301 cgagatggcg tgctttgatg tgcccgaagc cgcggatctt gccggggatc gaggcgaggc
      361 cgatggcgac agcgtggttg gagggggcga gcttgtccag gatctccgcg agcagcttgt
      421 cataggcgcg gatcagctgc cgctcggtcc tgcgctcatg cgtgtagccg aagacgtcga
      481 ggggcgtgcc gcgcagcgtc ctgagcttcg cgagcacggc aaaagccttc atcatccacg
      541 gcccaaaact catcttgcgc ggcagaccgg tcgccgggtc cttgcgcgcc agcagcggcg
      601 gcgcgaggtg gaactcgtag cgcaggttgt cgccctcgaa ggccgcctcg acctgctttg
      661 cgaaatggcc gttcgtgtag agccgcgcca cctcgtattc gtccttgtag gccatcagct
      721 tgaacaggtt gcgcgccact gcctcggtca gggcggtcga gttcgggacg gcctccgcct
      781 cccgggcgcg cacgcgctcg atggcggagc ggtagcgggc ggcatagcgg cggctctggt
      841 agtcggccag gaaggcgacg cgccgggcga tcacctcgtc gagcgtgccc gagagttgcc
      901 gcgacggcat cggcgccgcg agctgccgca tcatctctgc gacgcggtcg ggctcgagcg
      961 cggcgcggcg cccccacgcg aacgcgtcgc ggttcatgtc gaccgcctcg ccgttcagcg
     1021 cgatggcctg ctcgatcgac gccggcgaga gcggcacata gcccttctga caggcatagc
     1081 cgagcatgaa catgttggcg gcgatggcat tgccgagaat cgccgtcgcg atggctgtgg
     1141 cgttgacgaa ggctacatgc tcgcgtcctg ccgccgacac gatcgcgcgc ttgatgcgct
     1201 ccgccggcag cgagaagtcg gcgtcgcgcg tgaaatcacc tggcaggacc tcggccgtgt
     1261 tcacgacgag cgccgtctgc ccgtccttga cggaggcgag gacgcgcttg gttcccgtca
     1321 cgacgagatc gcagccgagg atcagatgcg ccgcggcggc gctgacgcgg atggcgtgga
     1381 tgtcgtcggg cgtgttggcg aggcgcacgt ggctgtagac cgctccgccc ttctgggcga
     1441 ggccggccat gtcgatcatg ccgcagccct tgccttccag atgcgccgcc atgccgagga
     1501 tggcgccgat ggtgacgacc ccggtgccgc cgacgccggt gacgatgatg ttgtaggtgc
     1561 ggtcaattgg tggcagcgcc ggctcgggca gcgccgacaa ttcgacgcct tcggttgaga
     1621 cggtttccgg catcgcccgc ttgggcttcg ccccgtgcac cgtcacgaag gacgggcaga
     1681 agccgcggag acatgaaaaa tccttgttgc agctcgattg gtcgatctgg cgcttcctg
//
LOCUS       DATAIQ010000030         2670 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_1181, whole genome shotgun sequence.
ACCESSION   DATAIQ010000030 DATAIQ010000000
VERSION     DATAIQ010000030.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2670)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2670)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2670
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1181"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(7..354)
                     /locus_tag="VHN20_00445"
     CDS             complement(7..354)
                     /locus_tag="VHN20_00445"
                     /inference="COORDINATES: protein motif:HMM:NF017837.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF930 domain-containing protein"
                     /protein_id="HEX2724267.1"
                     /translation="MAAKPSAQQEKRLDQQMLKLDLGTRIEQRCDARAGGDVSREHKG
                     FRVEQVIAYAFSDPEIRGTEVTARGAIVRSRGKWYRLSYRCRTTPDGTGIELFEHSLG
                     PEVPGWSIDKIAP"
     gene            733..2529
                     /locus_tag="VHN20_00450"
     CDS             733..2529
                     /locus_tag="VHN20_00450"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX2724268.1"
                     /translation="MLPTPARAPRAPLSLQMVLAASVLVPLGLFALGAWQSHRQLYSQ
                     AERDVRRQAVMLKEHASKVLKANQVVMEQVNQRVRGLSWDEIKTSRTLWDDLKAIDSD
                     LPQIDSIFMVDPSGVSALTTRVFPSPSVDFSDRDYFLAQRDGPRNAYVSGSYVGKISR
                     RRIFNQSIARDSGKFAFDGVIGVSAYVEDLESFYSVVARPEENASVALLRADGQVLAR
                     YPASINMHAQEFASALPASGIDEAIAYTRPDADASRRLVGYAKAPDFDVYVAYGTDEG
                     VLRSAWYGYLVQWGILALLAAAAMSGLAWLVVRRTWREAMALQQWAATYDELAREISR
                     REEAEAQLVQTQKLEALGQLTGGVAHDFNNLLQILSGHLGRLKARVADERSRRALSYC
                     EAAIEKGEKLIAHLLAFARRQPLRYEVFDLNACLGAMDGVLHQATTGVVIETELSSDL
                     WPVVADPTQLELAVLNLVVNARDAMPDGGTIRVTTANRRLGSGDGELPGEFVTCTVSD
                     DGPGIPADVLARVWEPFFTTKPAGKGTGLGLSMVYGFARQSGGFARIVSEVGRGTSVT
                     IFLPKGSPTSAYGSLPAAQSEPSKVVPFRRDR"
BASE COUNT          454 a          897 c          863 g          456 t
ORIGIN      
        1 gcgccgttag ggagctatct tgtcgatgct ccacccgggc acttccggcc cgagggagtg
       61 ctcgaacagc tcgattcccg tgccgtcggg tgtggtgcgg caacgatacg aaagccgata
      121 ccactttccc ctgcttcgaa cgatcgcacc gcgtgccgtc acttccgttc ctcgaatctc
      181 agggtcggaa aaggcgtaag cgatcacctg ctccactcga aaacccttgt gctcgcggct
      241 cacgtccccg ccggcgcgcg catcacaacg ctgctcgatc cgggtgccga gatcgagctt
      301 gagcatctgc tgatcgagcc gcttctcttg ctgcgccgat ggtttcgccg ccaacggtga
      361 agctgcaagc agcgtgagcc cgagagcggc ggcgaaagcg tgtctcatgc ggccgtggat
      421 gtgaaccgat tatggcgcca atgggacgcc gtcagaacaa agcactcctg ggctgccgag
      481 gaacgtccgc aggagcggga tcgattcggg actggggatt gcggctgagc gaatcacttc
      541 cgcaaccctt gaaactaatg atgcgctcgc gttgcgcgcg atcggagctg tcgggagggg
      601 tcctggtcgc ccttaaccct gaggggcgat gtcggttcca gcccttgaag ccgactggca
      661 tccaaaggat attccctcta gactcccttg gacctgagac tcccctggac ctgctcggaa
      721 gaagcgagag ccgtgttgcc gacgcccgcc cgcgcgccca gggcacccct gtccctgcag
      781 atggtcctcg ccgcatcggt cctggtgccg ctcgggctgt tcgcgctcgg cgcctggcag
      841 agccaccgtc agctctattc gcaagccgag cgcgacgtgc gccgccaggc ggtcatgctc
      901 aaggaacacg cctccaaggt cctgaaggcc aaccaggtcg tgatggagca ggtcaaccag
      961 cgcgtccgcg gcctgtcctg ggacgagatc aagacgtcgc ggacgctgtg ggacgatctc
     1021 aaggcgatcg acagtgatct gccgcagatc gactcgattt tcatggtcga tccaagcggc
     1081 gtgtcggcac tcaccacacg cgtcttcccc tcgccctcgg tcgacttctc ggaccgcgat
     1141 tactttctcg ctcagcgcga cgggccccgg aacgcttatg tcagtggttc ctatgtcgga
     1201 aagatcagcc gccgccgcat cttcaaccag agcatcgcgc gcgactccgg caagttcgcc
     1261 ttcgacggcg tgatcggcgt ctcggcctat gtggaagatc tcgagagttt ctattcggtg
     1321 gtggcgcggc ccgaggaaaa cgcctcagtc gcgctgctcc gcgccgacgg ccaggtgctg
     1381 gcgcgctacc cggccagcat aaacatgcac gcccaggagt tcgcgtccgc gctcccggcg
     1441 agcggcattg acgaagcgat cgcctatacg cgtcccgacg ccgacgcgtc gcgccgcctg
     1501 gtcggctatg ccaaggcgcc cgacttcgac gtctacgtgg cttacggaac ggatgagggc
     1561 gtcctcagat ccgcgtggta cggctatctc gtgcaatggg gcattctggc gttgctcgcg
     1621 gccgccgcca tgagcgggct ggcctggctg gtcgtcaggc gaacctggcg cgaagccatg
     1681 gcgctgcagc agtgggcggc aacctacgac gagctggcgc gtgagatcag ccgcagggaa
     1741 gaagccgagg ctcagctcgt gcagacgcag aagctcgaag cgctcggcca gctcacgggc
     1801 ggcgtcgcgc acgatttcaa caacctcctg caaatcctgt ctggccacct cggcaggctg
     1861 aaggcccgcg tcgccgacga gcgctcgcgc cgggcgctct cgtattgcga ggccgccatc
     1921 gaaaaaggcg agaagctgat cgcgcacctt ctcgcgttcg cccggcggca accgctcaga
     1981 tacgaagttt tcgatctgaa cgcgtgcctc ggcgcaatgg acggcgtgct gcatcaggcc
     2041 acaaccggcg tcgtcatcga gacggagctg tccagcgacc tgtggccggt cgtggccgac
     2101 ccgacgcagc tcgagcttgc ggttttgaac ctcgtcgtga acgcccgcga cgcgatgccg
     2161 gacggcggaa cgatccgcgt caccacggcc aaccggcgcc tcggatccgg cgacggcgag
     2221 ctgccaggcg agttcgtcac gtgcaccgtg agcgacgacg ggccgggaat tcctgccgac
     2281 gtgctggcgc gcgtctggga gcctttcttc acgaccaagc cggccggcaa ggggactggc
     2341 ctcggcctgt cgatggtcta cggcttcgcc aggcagtcgg gcggcttcgc ccggatcgtc
     2401 agtgaggtcg gacgcggcac ctcggtgacg atcttccttc caaagggctc gcccacatcg
     2461 gcctacggct cactgcccgc cgcgcaatcg gaaccgagca aggtcgtgcc gttcaggcgt
     2521 gatcggtaac gagcgacaac aacggcggag ttgccttgac gccgggcgag gcaggacgct
     2581 gagctcgccc gactctccgg gagcaggctg cccgatcacc ccgctcgacg aggcgccgct
     2641 tcgccgcgcc cggccaggat gcgcctgacc
//
LOCUS       DATAIQ010000031         2204 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_1242, whole genome shotgun sequence.
ACCESSION   DATAIQ010000031 DATAIQ010000000
VERSION     DATAIQ010000031.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2204)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2204)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2204
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1242"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..658)
                     /locus_tag="VHN20_00455"
     CDS             complement(<1..658)
                     /locus_tag="VHN20_00455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009762402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2724269.1"
                     /translation="MTVLLSVEALCKRYGPVVAVDDFSLAVSGGELIALLGPSGCGKT
                     TALRMIAGLTPATCGRVLVGGKDVTRLPAYRRNIGIVFQGYALFPHLTVAENVAFGLE
                     MRAVPRPELTRRVGEVLARVRLERLAERYPRQLSGGQQQRVAIARALVINPDILLLDE
                     PMSSLDIALRHDVGLELQALQRQVGVPTILVTHDQREALALATRLVVMSEGRIRQVGT
                     P"
     gene            complement(655..1434)
                     /locus_tag="VHN20_00460"
     CDS             complement(655..1434)
                     /locus_tag="VHN20_00460"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008963401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX2724270.1"
                     /translation="MRLLVVSAAAFALAPVAVLIWLSFAADPVVTVPPSGYTLRWYRQ
                     AIETPTFLYAFATSLKVALAATVLGVAAGTLASIALVRIPFRGRALLRSVFLSPIAVP
                     GIVLSTGIYLFYIQVERLGAYDLTDGLSGLVLAHCALTIPWSVRLVGAVLVGIDRSVE
                     EAAASLGATPLTTFRRVTLPLMRGGIVAATLISCIVSFENLEVSLLLAGPGRSTLPIA
                     LMQYLEFRMDPTAAAVCALQILAIVGLLLLADRAVGLGRIV"
     gene            1528..>2204
                     /locus_tag="VHN20_00465"
     CDS             1528..>2204
                     /locus_tag="VHN20_00465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724271.1"
                     /translation="MKTISAGMGWHMRVREIALERQADESRLAGVVDWEDAAHPSTRI
                     EFGVAGRHDFPSDRHWGDAFLAACLPLATFMGERRLRIETPACPMLVDGLHSVHAWWT
                     RWRRDTPPMPVIEVPAPPRTASRQAAPEATGCLSGGVDGLHMLLHNRRLFGRSDPAFI
                     RRALFVHGFDIGRRRRDPQEARFRMAAGRLRKLAEATDLELVTCRTNLRHLPIPPGLW
                     LHRYFGAA"
BASE COUNT          367 a          772 c          777 g          288 t
ORIGIN      
        1 ccggcgtgcc gacctgccgg atgcggcctt cgctcatcac caccaggcgc gtcgccaagg
       61 cgagcgcctc gcgctggtcg tgcgtgacga gaatggtcgg caccccgacc tgccgctgca
      121 acgcctgcag ctcgaggccg acgtcatggc ggagcgcgat atcgaggctc gacatcggct
      181 cgtcgagcag aaggatgtcg ggattgatca ccagcgcacg ggcgatggcg acgcgctgct
      241 gctggccgcc ggacagctgc cgcggataac gttcggcgag acgctcgagc cgcacacggg
      301 ccagaacctc gcccacgcgc cgcgtcagct ccggccgcgg cacggcgcgc atctccaggc
      361 cgaaggcgac gttctccgcc accgtcagat gcgggaacag cgcgtagccc tggaatacga
      421 tgccgatgtt gcggcggtag gcgggcagcc gcgtgacgtc cttgccgccg acgagcacgc
      481 ggccgcacgt ggcgggcgtc aggccggcga tcatgcgcag cgccgtggtc ttgccgcagc
      541 cgctcgggcc cagcagggcg atcagctcgc cgccgctcac cgcaagcgag aaatcatcga
      601 ccgcgaccac cggtccgtag cgcttgcaga gagcttcgac cgacaggagc acggtcacac
      661 gatgcggccg aggcccacgg cccggtcggc gaggaggagc aggccgacga tggcaaggat
      721 ctgcagcgcg cagacggcgg cggcggtcgg atccatgcgg aactcgagat actgcatgag
      781 cgcgatcggc agcgtcgagc ggcccggccc ggcgagcagg agcgagacct cgagattctc
      841 gaacgacacg atgcagctga tcagcgtcgc ggccacgatg ccgccgcgca tcagcggcag
      901 ggtcacgcgc cggaacgtcg tcagcggcgt ggcgccgagg ctcgccgccg cctcctcgac
      961 ggagcgatcg atgccgacga ggacggctcc cacgaggcgc acagaccacg gaatggtgag
     1021 cgcgcaatgc gccagcacca gccccgacag cccgtcggtg aggtcgtatg cgccgaggcg
     1081 ctccacctgg atgtagaaca ggtagatgcc ggtgctgagg acgatcccag gcacggcgat
     1141 cggcgacagg aacacggagc gcagaagggc ccggccgcgg aacgggatgc gcaccagcgc
     1201 gatgctcgcc agcgtgcccg cagcgacacc cagcaccgtc gcggcgagcg ccaccttcag
     1261 gctggtggcg aaggcgtaga ggaaagtcgg tgtctcgatc gcctgccgat accagcgcaa
     1321 cgtgtagccg gacggtggca ccgtgacgac cgggtcggcc gcgaagctca gccagatcag
     1381 gacggcgacg ggcgccaggg cgaaagccgc agcgctgacg acaaggagcc tcacgacctc
     1441 aattccgctt ctcactcatt tggaggttgt gcgcgctgcc atcctcccgt cactatagcc
     1501 gacgcatccg gccgatccag cccggaaatg aaaacaatct cagccggaat ggggtggcac
     1561 atgcgcgtgc gcgagatcgc gcttgagcgg caggcggacg agagtcgcct cgccggcgtc
     1621 gtcgactggg aggatgcagc ccacccctcg acgcgaatcg agttcggcgt tgcgggtcgc
     1681 catgattttc cctcggaccg gcattggggc gatgcgttcc tggcggcgtg cctgccgctg
     1741 gcgacgttca tgggcgagcg ccggctgcgg atcgagactc cggcctgccc gatgctcgtg
     1801 gacggccttc acagcgtgca cgcatggtgg acacgctggc ggcgcgacac gccgcccatg
     1861 cccgtcatcg aggtgccggc gccgccgcgg acggcgtcgc ggcaagcggc gcccgaggct
     1921 accggctgcc tgtcgggcgg cgtcgacggc ctgcacatgc tgctccacaa ccgccgcctg
     1981 ttcgggcgca gcgacccggc cttcatccgg cgcgcgctgt tcgtgcatgg cttcgacatc
     2041 ggccgccgcc ggcgcgaccc gcaggaagcg cgcttccgga tggccgccgg ccgcctgcgc
     2101 aagctcgccg aggcgaccga tctcgagctg gtcacgtgcc gcaccaacct tcgccatctg
     2161 ccgatcccgc cggggctttg gctgcaccgc tatttcggcg ccgc
//
LOCUS       DATAIQ010000032         2364 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_323690, whole genome shotgun sequence.
ACCESSION   DATAIQ010000032 DATAIQ010000000
VERSION     DATAIQ010000032.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2364)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2364)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2364
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_323690"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..829)
                     /locus_tag="VHN20_00470"
     CDS             complement(<1..829)
                     /locus_tag="VHN20_00470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006615267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3369 domain-containing protein"
                     /protein_id="HEX2724272.1"
                     /translation="MASEDEFLTFSEDEQSELASASARWKIAIIDDDQAVHDGTRFAL
                     YDYVLNGQGLEILSARSAAEGRELLQAHPDTAVVLLDVVMETENAGLDLVDYIRTDLK
                     NETVRIILRTGQPGQAPERRVIVDYDINDYKAKTELTADKLFTTLTAALRAYQQLQRM
                     VETRRGLEIIVDAASRLFDFRSMQRLAEGVLTQITSLLNVDCAGILVLRDGGIPEENF
                     AILAGSGCYRDLPGQPAAPPLDEEIRTLVSQAFARRCHDFDDRRSVLYVETVSGREIV
                     "
     gene            complement(832..>2364)
                     /locus_tag="VHN20_00475"
     CDS             complement(832..>2364)
                     /locus_tag="VHN20_00475"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HEX2724273.1"
                     /translation="ARLHATLDAATRGSDALVPALGKSREAFSAMLLAANSYYLSNAL
                     EGGEGAKRNADEVQRTAAAMLSLDLPDAQRETVTALQARAAALRKGLDLLSEQFAEQE
                     ALLRDAIDGNAAAMAASIDHVTEAIRQREGSAQARFDRVLSDLNMRILIVAAIFVLVV
                     MLISIGVAKSIREPLQELGAAMRAIIGGDYAPRVKGLTARDEIGEMARAVEVFRENAI
                     AKRRAEDALRASKEEAEAALSELRTTQTSLIEAEKLAALGSLVAGVAHEVNNPVGISL
                     TVASSLARRCDEFAREIETGPIRRSRLAEFVEGNRDAANQLVSNLHRAGELVQSFKQV
                     AVDRSQADRRLFDLRESTDQIIASLRPGLKKAQLRLVVDVPAGIVMDSYPGMFGQVLT
                     NLFLNSGYHAFPGDLGGTISVVARTSGSDQVHIIFRDDGVGMPEEVQRHAFDPFFTTR
                     RGDGGTGLGLHIVYTLITRKLGGRIVLSSEPGKGTTFRISLPRVSPAEEPGTPAVMSV
                     EG"
BASE COUNT          387 a          786 c          786 g          405 t
ORIGIN      
        1 ccacgatctc gcgcccgctg accgtttcga cgtagagaac cgagcggcgg tcatcgaagt
       61 cgtgacaacg gcgcgcgaag gcctggctca cgagcgtccg gatctcctcg tcgagagggg
      121 gagccgccgg ttgtccgggc agatccctgt agcagcccga gccggccaga atggcaaaat
      181 tctcttcggg gatgccgccg tcacgcagga ccaggatgcc ggcgcaatcg acattgagca
      241 gggaggtgat ctgggttagg acgccctctg ccaggcgctg catcgacctg aaatcgaaca
      301 atcgcgaagc ggcgtcgacg atgatctcga ggccgcgccg cgtctccacc atccgctgca
      361 gctgctggta ggcgcgcagg gctgccgtca gcgtggtgaa cagcttgtcg gcggtcagct
      421 cggtcttggc cttgtagtcg ttgatgtcgt aatcgacgat cacgcgccgc tcgggcgctt
      481 ggcccggctg cccggtgcgc aggatgatgc ggaccgtctc gttcttgagg tcggtgcgga
      541 tatagtcgac gaggtcgagc ccggcgttct ccgtctccat cacgacgtcg agaaggacga
      601 cggcggtgtc gggatgcgcc tgcagcagct cgcgcccctc ggccgccgag cgagccgaga
      661 gaatctccaa cccctggcca ttcagcacgt aatcatagag ggcgaagcgc gtgccgtcgt
      721 gcaccgcctg gtcatcgtcg atgatggcga tcttccagcg tgcggacgcc gaggccagct
      781 cgctctgctc gtcctcggaa aaggtgagga attcatcctc tgacgccatc gtcagccctc
      841 cacactcatg acggccggcg tccccggctc ctcggccggg gagacgcgcg gcaagctgat
      901 ccggaacgtc gtgcccttgc cgggctcgga cgacaacacg atgcgcccgc caagcttgcg
      961 ggtgatgagc gtatagacga tgtgcagccc gaggccggtg ccgccgtcgc cacgacgggt
     1021 cgtgaagaac ggatcgaagg catgacgctg gacctcctcg ggcatgccga cgccgtcgtc
     1081 gcggaaaatg atatgcacct gatctgatcc gctggtcctc gccacgacgc tgatcgtgcc
     1141 gcccaggtcg ccggggaagg catggtagcc cgaattgagg aaaaggttgg tcagcacctg
     1201 cccgaacatg cccgggtaac tgtccatcac gatgcccgcc ggcacgtcca ccaccaagcg
     1261 cagctgggcc ttcttgagac ccgggcgcag gctggcgatg atctgatcgg tcgattcacg
     1321 caggtcaaag agccggcggt cggcctggct gcggtcgacg gcgacctgtt tgaaggattg
     1381 aacgagctcc cctgccctgt gcagattgga cacgagctgg ttggccgcgt ccctgttgcc
     1441 ttccacgaac tcggcgagcc gggagcgcct gatcggcccg gtctcgatct cccgggcgaa
     1501 ttcatcgcag cggcgcgcca ggctcgaggc caccgtgagg ctgatcccga ccgggttgtt
     1561 gacctcgtgg gcgacgcccg ccaccaggct ccccaacgcc gccagcttct cggcttcgat
     1621 caggctcgtc tgcgtggtgc gcagctccga gagggcggcc tcggcttctt ccttggacgc
     1681 gcgcagggcg tcttcggcgc ggcgcttggc gatcgcgttt tcacggaaaa cctcgacggc
     1741 gcgtgccatc tcgccgatct cgtcgcgagc cgtcagccct ttcacccggg gtgcgtaatc
     1801 gccaccgatg atggcgcgca tggccgcgcc gagctcctgc aaaggctcgc gaatgctctt
     1861 ggcgacgccg atgctgatca gcatgaccac caggacgaag atcgcagcga cgatcaggat
     1921 gcgcatgttc aggtcggaca ggacgcggtc gaagcgcgcc tgagccgacc cctcgcgttg
     1981 ccggatggcc tccgtcacgt gatcgatcga cgcggccatc gccgcggcat tgccgtcgat
     2041 ggcatcgcgc aacagcgctt cctgttccgc aaactgttcg gagagcaggt cgagaccttt
     2101 ccgcaacgcc gcggcgcggg cctgcaacgc ggtcacggtt tcacgctgcg cgtcgggcag
     2161 atcgagggac agcatcgccg cggcggtgcg ctggacctcg tccgcattcc tcttcgcacc
     2221 ttcgccgcct tccaacgcgt tcgagaggta atacgagttc gcggccagca gcatggcgct
     2281 gaacgcctcg cgcgatttcc cgagcgccgg cacgagcgcg tcggatccgc gcgtggcggc
     2341 gtcgagcgtc gcgtgcaggc gcgc
//
LOCUS       DATAIQ010000033         3892 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_278349, whole genome shotgun sequence.
ACCESSION   DATAIQ010000033 DATAIQ010000000
VERSION     DATAIQ010000033.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3892)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3892)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3892
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_278349"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..333
                     /locus_tag="VHN20_00480"
     CDS             <1..333
                     /locus_tag="VHN20_00480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012453795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RND transporter"
                     /protein_id="HEX2724274.1"
                     /translation="FQGFSRTLQQQATIVQFAVENPPASISVGQPVTVIARNGASVKG
                     IVVPRDAVVRGANGEPVVWRHTNAERFEARPVRTEPFDAARLVISAGIAEGERVVTRG
                     AELINQIR"
     gene            342..3464
                     /locus_tag="VHN20_00485"
     CDS             342..3464
                     /locus_tag="VHN20_00485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012453796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX2724275.1"
                     /translation="MFSFLVRNSLANRLFVLAAALALVAYGLFVLPRIPVDVFPDLNR
                     PTVTLMTEAEGLAPQEVEQLVTYPIETSMNGMPGVMRVRSVSGVGLSIVYVEFDWGTD
                     IYRSRQLVAERLALVREQLPRGVMPQMGPVTSIMGEIMLIAVTSESDKVSPMDVREIA
                     DFVIRPQLLTITGVAQVIPIGGEVRQYRIVPNIAAMQALEVTHEQIEAAVTRFGTNTG
                     GGFVDQHGREYLIRNVGLTRRLDDLRNTVVVHRQGQPIFLHQVAKADFAARVKRGDAG
                     YQGKPAVIVSVQKQPGADTVDLTGRIEAALADIQKTLPAGVSATNVQFRQATFIETSI
                     DNVKRVLIEAAVVVAIILIAFLMNVRATAISLTAIPISILVTVVVFQAFGMTINTMTL
                     GGLAIAIGELVDDAVVDVENILRRLKENRQLPIPRPVLEVIANASQEVRSGIIYATMI
                     IILVFVPLFALSGIEGRLFAPLGVAYIVSILASLVTSITVTPVLAYYLLSGKVKGHER
                     DSFVVRKLKAGNRRLLDWAIAHRGLLFASVSMAVALAAFAATLLPRAFLPPFNEGTLT
                     ISLAYNPGISLAESHRLGLVAETLIAQVPEAVSVGRRTGRAELDEHAEGVHSSEIDVD
                     LKRSGRSKEEVMADVRARLAVLPATLNIGQPISHRLDHMLSGVRAEIALKIYGEDTDT
                     LRTVAESLRERLSRVEGVVDLQVEKQVRIPQLRIDVDHERAALYGLTPAMVTQALETM
                     SNGRTVSQIVEGNRRFDVVMRLSDQDRSTTGLGDLLIAAPAGHVPLRMVARVEETDGP
                     NQILRENGQRRIAVVGNTDGRRDMAAIVADIRRIIGETPLPQGYVTRLEGTFQAQEEA
                     TLRIGALSLLSLTMIFVVLYSRYHSPALALIIMGNIPLALIGSVIALNIAGQPLSVAS
                     MIGFITLGGITARNGILKISHYINLALYEGERFGRDLVLRGSLERLTPVLMTALSAGL
                     ALTPLLVGGDLPGREILHPVAVTIFGGLISATLLDTLLTPVLFLTFGRKALERIQASR
                     AGALTPAEAF"
     gene            3486..3860
                     /locus_tag="VHN20_00490"
     CDS             3486..3860
                     /locus_tag="VHN20_00490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724276.1"
                     /translation="MKHLLIILAVTALPAVASGHESAKGPNGGPVVDSSGHHVEMVVN
                     GAELVLFLTGDADAPIASAGTKNARAIVQDGGKTATVPLQPAQPNKLVGALAAPLGKG
                     ARVVVSATMADGHAVQARFVNN"
BASE COUNT          623 a         1371 c         1255 g          643 t
ORIGIN      
        1 ttccagggct tcagccggac cttgcagcag caggcgacca tcgtgcagtt cgctgtcgag
       61 aatccgccgg caagcatcag cgtcggccag ccggtgacgg tgatcgccag gaacggcgcc
      121 tccgtgaagg gcatcgtcgt gccgcgcgac gcggttgttc gcggggccaa tggcgagcca
      181 gtggtgtggc gtcacacgaa tgcggagcgg ttcgaggcgc gcccggtgcg caccgagccg
      241 ttcgacgcgg cgcgcctcgt catcagcgcc ggcatcgccg agggcgagcg ggtcgtgacc
      301 cgcggcgccg agctcatcaa ccagatccgg tgagcggcac gatgttcagc tttctcgtcc
      361 gcaacagtct cgcgaaccgg ctgttcgtcc tggccgcggc cctggcgctc gtcgcctacg
      421 gcttgttcgt cctgccgcgc attccggtcg acgtgttccc cgatctgaac cgtccgacgg
      481 tcacgctcat gaccgaggcg gagggcctcg cgccgcagga ggtcgagcag ctcgtcacct
      541 accccatcga gacgtcgatg aacggcatgc cgggcgtcat gcgcgtccgc tccgtgtccg
      601 gcgtcggcct ttcgatcgtc tacgtcgagt tcgactgggg cacggacatc taccgttcgc
      661 gccagctggt ggccgagcgc ctcgccctgg tgcgcgagca gctcccgcgc ggcgtcatgc
      721 cccagatggg cccggtcacc tcgatcatgg gcgagatcat gctgatcgcc gttacgagcg
      781 agagcgacaa ggtcagcccg atggacgtgc gggaaatcgc cgacttcgtc atccgcccgc
      841 agctcctgac catcactggc gtcgcgcagg tgatcccgat cggcggcgag gtgcggcaat
      901 accgcatcgt gcccaacatc gccgccatgc aggccctgga ggtcacgcac gagcagatcg
      961 aggcggcggt cacgcgcttc ggcaccaaca cgggcggcgg cttcgtcgat cagcacgggc
     1021 gcgaatacct gatccgcaac gtcggcctca ccaggcgcct cgacgatctc cgcaatacgg
     1081 ttgtcgtgca ccggcagggc cagccgatct tcctgcatca ggtcgccaag gcggatttcg
     1141 ccgcgcgcgt gaagcgcggc gacgccggct atcagggcaa gcccgccgtc atcgtttcgg
     1201 tccagaagca gccgggagcg gataccgtgg acctgacggg caggatcgag gcggcgctcg
     1261 cagacatcca gaagacgctt cccgccggcg tttcggcgac gaacgtgcag ttccggcagg
     1321 cgaccttcat cgagacgtcc attgacaacg tcaagcgcgt gctgatcgag gcagccgtgg
     1381 tcgtcgcaat catcctgatc gccttcctga tgaacgtgcg ggcgacggcg atctcgctca
     1441 cggcgatccc aatctcgatc ctggtgacgg tcgtcgtgtt ccaggcgttc ggaatgacca
     1501 tcaacacgat gacgctcggc ggcctcgcca tcgccatcgg cgagctcgtc gacgacgcgg
     1561 tcgtcgacgt cgagaacatc ctgcggcgtc tgaaggagaa ccggcagctt cccattcccc
     1621 gtccggtgct cgaggtgatc gccaacgcgt cccaggaggt gcgctccggc atcatctatg
     1681 cgaccatgat catcatcctc gtgttcgtgc cgctgttcgc gctgtcgggc atcgaaggcc
     1741 gcctcttcgc cccgctcggc gtcgcctaca tcgtctcgat cctggcctcg ctcgtcacct
     1801 cgatcacggt gacgccggtg ctcgcctatt acctgctctc cggaaaggtg aaaggccacg
     1861 agcgcgacag cttcgtcgtg cgcaagctca aggccggcaa ccggcgcctt ctcgactggg
     1921 cgatcgccca tcgcggactg ctgttcgcaa gcgtcagcat ggcggtcgcc ctggcggcct
     1981 tcgcggcgac gctcctgccg cgcgccttcc tgccgccgtt caacgagggc accctcacca
     2041 tcagtctcgc ttacaacccc ggcatctcgc tcgccgagag ccaccggctt ggcctcgtcg
     2101 ccgagaccct gatcgcccag gtcccggagg ccgtctccgt cggccgccgg accggacgtg
     2161 ccgagctcga cgagcacgcc gagggcgtcc actcgtccga gatcgatgtc gacctgaagc
     2221 ggtccgggcg gtcgaaagag gaggtgatgg ccgatgttcg cgcacggctg gccgtgctgc
     2281 cggcgacgct caatatcgga cagccgatct cacaccggct cgaccacatg ctgtcgggcg
     2341 tccgggccga gatcgcgctc aagatctacg gcgaggacac cgacaccttg cgcaccgtcg
     2401 cggaaagcct gcgcgagcgg ctgtcgcggg tggaaggcgt cgtggacctt caggtcgaga
     2461 agcaggtccg catcccgcag ctccgaatcg acgtcgatca cgagcgcgct gccctttacg
     2521 gcctgacgcc ggcgatggtg acgcaggcgc tggagacgat gtcgaacggg cgcacggtgt
     2581 cccagatcgt cgagggcaac cgtcgcttcg acgtggtcat gcgcctgtcc gaccaggacc
     2641 gctcgaccac cggtctcggc gacctcctca tcgccgcgcc ggccggacac gtgccgctcc
     2701 gcatggtggc gcgcgtcgag gagacagacg ggccgaacca gatcctgcgc gagaacggcc
     2761 agcgccgcat cgcggtcgtc ggcaacaccg atgggcgccg cgacatggcg gccatcgtcg
     2821 ccgatattcg caggatcatt ggcgagaccc cgttgccgca gggctacgtc acgcgcctcg
     2881 agggcacttt ccaggcgcag gaggaggcga cgctccgcat cggcgcgctg tcgctgctgt
     2941 cgctgacgat gatcttcgtc gtcctctaca gccgctacca ctcgccggcg ctggcgctga
     3001 tcatcatggg caacatcccg ctcgccctga tcggcagcgt aatcgccctc aacatcgccg
     3061 ggcagccgct ctcggttgcc tcgatgatcg gcttcatcac cctcggcggc atcacggcgc
     3121 gcaacggcat cctcaagatc agccactaca tcaacctcgc gctctacgag ggcgagcggt
     3181 tcgggcgtga cctcgtcctg cgcggcagcc tggagcggct gaccccggtg ctgatgaccg
     3241 cgctatcggc cggcctcgcg ttgacgccgt tgctcgtcgg cggcgacctg ccgggccgcg
     3301 agatcctgca ccccgtcgcc gtgacgatct tcggcggcct gatctcggcg acgctcctcg
     3361 acacgctgct cacgcccgtc ctgttcctga ccttcgggcg taaggcgctg gagcgcatcc
     3421 aggcaagccg cgccggcgcg ctcacgccgg ccgaagcgtt ttgatgcacc tcaaggagaa
     3481 acaacgtgaa acatctcttg atcatccttg ctgtcaccgc cctccccgcg gtggcctcgg
     3541 gccacgaaag tgcgaaaggg ccgaatgggg gtcccgttgt cgacagctcc ggtcatcatg
     3601 tcgagatggt cgttaacgga gccgagctcg tgctcttcct gaccggcgat gccgacgcgc
     3661 cgatcgcttc cgccggcacg aagaacgcgc gcgccatcgt gcaggatggc ggcaagaccg
     3721 cgaccgtgcc gctgcaaccc gctcaaccga acaagctggt cggcgcgctc gccgcgccgc
     3781 tcggcaaggg ggcgcgcgtc gtcgtgtccg caaccatggc cgacggccac gccgtccagg
     3841 cccgcttcgt caacaactga tctctcagcg aaggagaagg accatgatga ag
//
LOCUS       DATAIQ010000034         1636 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_185280, whole genome shotgun sequence.
ACCESSION   DATAIQ010000034 DATAIQ010000000
VERSION     DATAIQ010000034.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1636)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1636)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1636
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_185280"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..619)
                     /locus_tag="VHN20_00495"
     CDS             complement(<1..619)
                     /locus_tag="VHN20_00495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724277.1"
                     /translation="MSYLVRGHDYLKRYPDFRLIARDAELKELASILMRKTSNSVLLV
                     GPAGVGSSALCLGLQAMKHNADAPFDVVSKRLYWLETDGLFSSGDPVQINAAFQKMIA
                     QLWREPNDVLIIKDTRVFIEASQRSGCGHFMNALTNASRNEKVQIILEVRDEDLDYVM
                     KAHTDIRESYTLMDVQEPRPEALKAIIDCVCDGLVAHHGIRISEDA"
     gene            complement(659..>1636)
                     /locus_tag="VHN20_00500"
     CDS             complement(659..>1636)
                     /locus_tag="VHN20_00500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724278.1"
                     /translation="GKAALGAELESLREQLRQRQNQTGEHAQRKAKLRELLDLRGEDH
                     RQRQTDLVKAALHFVETSKTRISSVRAHLGGMNEQIENLFDANQHISRVYAVLGEGIT
                     TAEKKNQELRVGFEPPKDGEESLIQKHTREEKKTAIEQYMATLTDAKQDTMVTFADLT
                     GQTIRIKTMLEANTAQVSRVKTMQSQGVAGVADRLATVLQAVSQAALGESSAAAKDTL
                     ALMVESTNRVAQNQTIATAMGVGEANKDLLRAIDDLGAYGEVLREATAITQAGVQEAR
                     GYLDQLRTLAEDVKGDIGNAFAVHAEAALGTPAKKPDKATVKSPFSFGS"
BASE COUNT          245 a          517 c          543 g          331 t
ORIGIN      
        1 gggcatcctc ggaaatgcgg atgccgtgat gcgcgacgag tccatcgcac acgcagtcga
       61 tgattgcctt gagcgcctcc ggacgcggct cctgcacgtc cataagggta tagctctcgc
      121 ggatgtcggt gtgcgccttc atcacgtaat cgaggtcctc gtcgcggacc tcgaggataa
      181 tctgcacctt ctcattgcgc gaagcattgg tgagcgcgtt catgaagtgg ccgcagcccg
      241 agcgctgcga tgcttcgatg aagacgcgcg tgtccttgat gatcagcacg tcgttcggct
      301 cgcgccacag ttgggcgatc attttctgaa acgcggcgtt gatttgcacc ggatcgccgg
      361 acgaaaacag accgtccgtt tcgagccagt aaaggcgctt cgagaccacg tcgaatgggg
      421 cgtcggcgtt atgcttcatc gcctgcaggc cgagacagag cgccgacgat ccgaccccgg
      481 cagggccgac gaggaggacc gagttcgacg tcttgcgcat caggatcgag gcaagctcct
      541 tgagctcggc gtcgcgcgcg atgaggcgga agtcggggta gcgtttgaga tagtcgtgcc
      601 cgcggacgag gtaagacatg ggcctctcca aaccgaaagc ggcgcccggc cggttgcgtt
      661 acgacccgaa cgagaacggc gatttgaccg tcgccttgtc gggcttcttg gccggggtgc
      721 cgagcgctgc ctcggcgtgc accgcgaaag cgttgccgat atcgcccttg acgtcctcgg
      781 cgagagtgcg cagctggtcc agatagccgc gcgcctcctg cacgccggcc tgggtgatcg
      841 ccgtcgcctc acgcagaacc tcgccgtagg caccgagatc gtcgatcgcg cgcaacaggt
      901 ccttgttggc ctccccaacc cccatggcgg tggcgatggt ctggttctgg gcgacgcggt
      961 tcgtgctctc caccatgagc gccagcgtgt cctttgcggc cgccgacgac tcgccgagcg
     1021 cggcctgcga gaccgcctgg agcacggtcg cgaggcgatc ggcaacgccg gcgacgcctt
     1081 gcgactgcat cgtcttgacg cgactgacct gggcggtgtt tgcctcgagc attgtcttga
     1141 tgcggatggt ctgcccggtg agatcggcga aggtcaccat cgtgtcctgc ttggcgtcgg
     1201 tgagtgtggc catgtactgc tcgatcgccg tcttcttttc ctcacgcgtg tgcttctgga
     1261 tcaggctctc ctcgccgtcc ttcggcggct cgaacccgac gcgcagttcc tggttcttct
     1321 tttccgccgt cgtgatgccc tcgccgagca ctgcgtagac gcgcgagatg tgctggttgg
     1381 catcgaacag gttctcgatc tgctcattca tgccgccgag atgcgcacgc acgctcgaga
     1441 tgcgcgtttt cgatgtctcg acgaagtgga gcgcggcctt gaccaggtcg gtctggcgct
     1501 ggcggtggtc ctcgccgcgc aggtcgagga gctcgcgcag cttcgccttg cgctgggcgt
     1561 gctcgccggt ctggttctgg cgctggcgca gctgctcgcg caaggactcg agctcggcgc
     1621 cgagggccgc cttgcc
//
LOCUS       DATAIQ010000035         1738 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_93694, whole genome shotgun sequence.
ACCESSION   DATAIQ010000035 DATAIQ010000000
VERSION     DATAIQ010000035.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1738)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1738)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1738
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_93694"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..608
                     /locus_tag="VHN20_00505"
     CDS             <1..608
                     /locus_tag="VHN20_00505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009494017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724279.1"
                     /translation="WREIGVKLFVKPQDRTVLRNRAYSGLTVMVAAEGLDNALPTPVM
                     PPTELAPMSQAFYAWPKWGQFVETKGKNGEACDLHEARQLLELYQQWMSTGDKDEQVR
                     IWREMLHNHAENQWSIGTIAGALQPVVAKAGLRNIPERALYSWEPTAMLGVYRMDEFY
                     WERAMGREARAGSAGITRGSAPATSVVASAAPSAPEKQDRR"
     gene            605..1621
                     /locus_tag="VHN20_00510"
     CDS             605..1621
                     /locus_tag="VHN20_00510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX2724280.1"
                     /translation="MIKFLLRRLVTMAVTLLIISALVFLIIKLPPGDFLSNQIAELRA
                     QGEAASAAKAEFLIKQYGLDRPVWEQYLVWIGVWPGPNGFSGLLQGDWGWSFEFDKPV
                     HEVVGDALWLTLLVNLAVVVFVHLVSIPIAIYSATRQYSAGDYFATLLGYLGLATPNF
                     LLALILLYYMNRWFGVSIGGLYDAQYAGQPWTWAKVQSLLSHLIVPTLVIGLGGTAAM
                     IRRMRANLLDELGKQYYVTAKAKGLPPTRALVKYPFRMSLNPFIADIGNLLPHLVSGS
                     VLVSLVLSLPTVGPILLAALKSQDQFLAGFILMFVAVLTVVGMLISDLLLAWLDPRIR
                     LGGR"
BASE COUNT          267 a          593 c          562 g          316 t
ORIGIN      
        1 tctggcgcga gatcggcgtc aagctgttcg tcaagccgca ggaccgcacg gtgctgcgca
       61 accgcgccta ttccggcctc acggtgatgg ttgccgccga gggcctcgac aacgccctgc
      121 cgacgccggt gatgccgccg accgaactcg cgccgatgtc gcaagccttc tacgcctggc
      181 cgaaatgggg gcagttcgtc gagaccaagg gcaagaacgg cgaagcctgc gatctgcacg
      241 aggcgcggca gctgctcgag ctctatcagc agtggatgtc gaccggcgac aaggacgagc
      301 aagtccggat ctggcgcgag atgctgcaca atcacgccga gaaccagtgg agcatcggca
      361 cgatcgcggg cgcgctgcag cccgttgtcg ccaaggccgg cctcaggaac attcccgaac
      421 gcgcgctcta cagctgggag ccgacggcga tgctcggcgt ctaccgcatg gacgagttct
      481 attgggagcg cgccatgggc cgcgaggccc gcgccggcag cgcaggcatc acccgcgggt
      541 ctgcgcccgc gacttcggtc gtggcatcgg ctgcgccaag cgcacctgag aagcaggatc
      601 gtcgatgatc aagttcctgc tccggcgcct ggtgacgatg gcggtgacgc tgctgatcat
      661 ctcggccctc gtcttcctga tcatcaagct gccgccggga gattttctga gcaaccagat
      721 cgccgagctg cgcgcgcagg gcgaggccgc gtccgccgcc aaggccgagt tcctgatcaa
      781 gcaatacggc ctcgaccgcc cggtctggga gcaatacctc gtctggatcg gcgtctggcc
      841 ggggccgaac ggcttctccg gccttttgca gggggactgg ggctggtcgt tcgagttcga
      901 caagccggtc cacgaggtcg tcggcgacgc gctctggctc acgcttctcg tcaatctcgc
      961 ggtggtcgtg ttcgtgcacc tcgtgtcgat cccgatcgcc atatattcgg ccacccggca
     1021 atattccgcc ggcgattatt tcgcgacctt gctcggctat ctcggcctcg ccacgccgaa
     1081 tttcctgctg gcgctgatcc tgctctacta catgaaccgc tggttcggcg tgtcgatcgg
     1141 cgggctctac gacgcgcagt atgcggggca gccctggacg tgggccaagg tccagtcgct
     1201 gctctcgcat ctgatcgtgc cgacgctggt catcggcctc ggcggcaccg cggcgatgat
     1261 ccggcgcatg cgcgccaacc tgctcgacga gcttggcaag caatactacg tgacggccaa
     1321 ggcgaagggg ctgccgccga cccgggccct cgtcaaatac ccgttccgga tgtcgctcaa
     1381 tccgttcatc gccgacatcg gcaacctgct gccgcatctc gtgtccggct cggtcctcgt
     1441 ctcgctggtg ctgagcctgc cgaccgtcgg accgatcctg ctcgcggcgt tgaagagcca
     1501 ggaccagttc ctcgccggct tcatcctgat gttcgtcgcc gtgctgaccg tcgtcggcat
     1561 gctgatctcg gatttgctgc tcgcctggct cgaccctcgc atccggctcg gggggcgctg
     1621 agcatgaacg tgcaagcccc gccgcggccg cgccactacg tcgacacggc gccgttcgat
     1681 cccggcttga gcgagcccac gggcggcgag agcgaggcgt tctaccgtgc ctcgtcgt
//
LOCUS       DATAIQ010000036         6553 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_1457, whole genome shotgun sequence.
ACCESSION   DATAIQ010000036 DATAIQ010000000
VERSION     DATAIQ010000036.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 6553)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6553)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6553
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1457"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            258..1373
                     /locus_tag="VHN20_00515"
     CDS             258..1373
                     /locus_tag="VHN20_00515"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006021839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX2724281.1"
                     /translation="MKLGFFTMPIHPLGKDWRQCLREDREAFILADELGFSEAYVGEH
                     STDQAENITSCAMFVATLAEATKRIRLGTGTVNMPNSHPARIAAEIAMLDHLLDGRFI
                     FGISPGGLLSDAEVFGNLDANRNEMFLEAINQVLEIWASDPPYNIKGKYWTISTERTQ
                     MQDIGQGFLPKPLQRPHPPIVVTAVAPFSKGVTEAAARGWEPISANFLMPQWVKSHWP
                     KYVEGCERAGRAADPANWRVAKSIFVADDDKTAKEYATASNSPYRYYYNSLVTKLKKN
                     GRAELFKTSRDMPDEAVTTDMVCDELIIHGSPQKVADEILAFRDKVGDFGTLLYAGKD
                     WLDRDLGRRSMILLAEKVLPIVNSAIARGGAKAQAAE"
     gene            complement(1404..2108)
                     /locus_tag="VHN20_00520"
     CDS             complement(1404..2108)
                     /locus_tag="VHN20_00520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012252918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2724282.1"
                     /translation="MLEVKDLNAWYGRSHVLQGVTFAVGKGEAVCMIGRNGAGKTTTL
                     RSIMGLVARRGGEVRFNGADIIAEPTHRRFALGLAYVPEERRIVPGLTVQENLRLGLV
                     ASPNRAREAEVIDRIAQTFPRLKERLGQAADTLSGGEQQMLAIARAMVSDPQLIMLDE
                     PSEGIMPVLVDEMFELFARMKKQGITLLLVEQNVERALQLADRAYVMDHGEIVHSGDA
                     KALLADKEIQERYCAV"
     gene            complement(2111..2857)
                     /locus_tag="VHN20_00525"
     CDS             complement(2111..2857)
                     /locus_tag="VHN20_00525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008960605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2724283.1"
                     /translation="MTTPILRAEAVGKKFGGFTALQGVSVDFFGDRLTSIIGPNGAGK
                     STFFNVLSGAFAPTSGRIFFQGDEITGLPQHRFAHRGIAKSFQITNLFPQLSVLENVR
                     VAAQAMRTTFDLWSPRWRLRELTDKAESLLGLVGLAHRRHEPAGNLAHGDQRSLEIAV
                     ALACDPRLLLLDEPTAGMSPEEARQMMDLIVKLNQERTVITVEHRMKLVMGISDRIVV
                     LHHGQLLAEGSPDEIRRHDEVRRVYLGQTV"
     gene            complement(2866..3864)
                     /locus_tag="VHN20_00530"
     CDS             complement(2866..3864)
                     /locus_tag="VHN20_00530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009027124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX2724284.1"
                     /translation="MAKAADMALGARAPNGARLAGLIGWVTRNRVLVAILFLAVFPWF
                     APYKALAVNILIYGLFAMGFNLVYGYAGMLSFGHAALFGRGAYGCGVPIAKFGVPWFV
                     ALPLGVIVAGIAAAIIGWFATRTRGIYFAMVTLALSQVVYYIVFQWVSLTGGEDGLRG
                     VNVPAIDAFGMHISLLNPTTKYYAILLFVALALWVFSRILNSPFGAVIETLRENERRA
                     RACGYDVTRVRWVVFVLSGLFSGLAGALYAIHLSVVPIETLHYFTSANVLMMTLLGGM
                     GTFFGPFLGAFLFLLLQDVIVVYTTHWQIIVGTVFVLLILFFPRGIWGSLLHWLRS"
     gene            complement(3872..4747)
                     /locus_tag="VHN20_00535"
     CDS             complement(3872..4747)
                     /locus_tag="VHN20_00535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020176261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX2724285.1"
                     /translation="MTLDLFLLQLFTGLALGSIFVLVALGISLIFGLLTIVNFAHSQF
                     FMLGAYVGAFALALSGNFWFALFAVPLVVGALGMLSERFLVRPLYGRGIDYPLLLTYG
                     LGLIILDAVRIFAGTEGIPFPAPEALSGAVDLGFFFFPKYRLFLILVTAVLLAALWFL
                     LEKTPYGLIIRAGARDQEIVQVLGVNISRVWLVVFGIGVALAGLAGVLAAPIRGVFPE
                     MGVPVLVEAFVVTVVGGMGSLLGAVVAGLLVGITVSFTSFYFPQMATLSMFLLMALVL
                     VFRPRGLFGRAGLME"
     gene            complement(4903..6153)
                     /locus_tag="VHN20_00540"
     CDS             complement(4903..6153)
                     /locus_tag="VHN20_00540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006021834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX2724286.1"
                     /translation="MSRKPLDLTRRGLLGTAAAGGAAAVLPFSFNIVRAQEGPIKIGF
                     PVPLSGPYSTEANDQVRCAQLAVDFFNEGGGLKGRKAELVVRDDKLDPGEAATRALEL
                     IESDKVNFLCGSLSASVQLSVNQVTSKRGVIYNSISQSDTINEASDFSRFTFHEALNP
                     HMTSGAVGRYAFGKLGAKKVAYLIADYAYGHEMLRGFRRIAKEMKIEEAVEIRHPLGT
                     TDFSTFFPRIQAARPDVLVVVNFGRDQLNTVKQANDFGLKRQMKIVYPVLLDTQRLAG
                     GGAPFEGVIGGANYYWAIEDKVPSAKRFNDAYRKKHGDAVPTAYGALGFAGVHGLLEG
                     VKKAGSSDTDAVIAAMEQLKYDAYKGEQYFRKCDHQAVQSVLVIESKPEKSMKGKWDI
                     FDVVHTEAADEKVLRTCQELGHKA"
     gene            complement(6239..>6553)
                     /locus_tag="VHN20_00545"
     CDS             complement(6239..>6553)
                     /locus_tag="VHN20_00545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019198547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEX2724287.1"
                     /translation="GVVQGLGPALFEHCLYDQQGQLMNGNMADYLVPMAAEMPDIEVG
                     HVVSPTLESELGAKGAGEAGTAGAAAAVANAVNDALKPFDVCITDIPLTPDLVLRALG
                     RV"
BASE COUNT         1196 a         2170 c         2189 g          998 t
ORIGIN      
        1 tttttggtcc gccgactgcc tcctgggaga agcgactcac gggtaatcga aacgccgggc
       61 gctcacaatc ggccggcaag gaacagccgt ggacaacccg gggcgcggag gcgaaggggc
      121 aaaaaatatc ggcgcctcag ccgctcccgg gctcggcatc attagaaaag gcgatgcggc
      181 ggtgcagaag atatgatttc ggccgtgcat cgccagccgc tacacatcgc tccagcgatc
      241 ccggagcgga gaccgacatg aagctcggct ttttcaccat gccgatccat cctctcggca
      301 aggactggcg ccagtgcctg cgcgaggacc gcgaggcgtt catcctggcc gacgagctcg
      361 gcttcagcga agcctatgtc ggcgagcact ccaccgacca ggccgagaac atcacctcat
      421 gcgcgatgtt cgtcgcgacc ctcgccgagg cgacgaagcg gatccggctc ggcaccggca
      481 ccgtcaacat gccgaacagc cacccggcgc gcatcgccgc cgaaatcgcc atgcttgatc
      541 acctgctcga cggccgcttc atcttcggca tcagccccgg cggtctcctg tcggacgccg
      601 aggtgttcgg caatctcgac gccaatcgca acgagatgtt cctggaggcg atcaaccagg
      661 tgctggagat ctgggcgagc gatccgccgt acaacatcaa gggcaaatac tggacgatct
      721 cgaccgagcg cacgcagatg caggacatcg gccagggctt tctgccgaag cccttgcagc
      781 gcccgcatcc accgatcgtc gtgaccgccg tggcgccgtt ctcgaagggt gtgacggagg
      841 cggcggcgcg cggctgggag ccgatctcgg ccaacttcct gatgccgcaa tgggtgaaga
      901 gccactggcc gaaatacgtc gagggctgcg agcgcgccgg ccgcgcggcc gatccggcca
      961 actggcgcgt cgccaagagc atcttcgtcg ccgacgacga caagaccgca aaggaatacg
     1021 cgacggcgtc gaacagcccc taccgctatt actacaactc gctcgtcacc aagctgaaga
     1081 agaacgggcg cgcggagctg ttcaagacca gccgcgacat gcccgacgag gcggtgacca
     1141 cggacatggt gtgcgacgag ctgatcatcc acggctcgcc gcagaaggtg gccgacgaga
     1201 tcctcgcctt ccgcgacaag gtcggcgact tcggcacgct gctctatgcc ggcaaggact
     1261 ggctcgaccg cgacctcggc cggcgctcga tgatcctgct cgccgaaaag gtgctgccga
     1321 tcgtcaactc cgcgatcgcg cgcggcggcg ccaaggcgca ggcggcggag taatcacctc
     1381 gcccgcgaag cggggcaggg attttacacg gcgcagtagc gctcctggat ttccttgtcg
     1441 gcgagcagcg ccttggcgtc gccggaatgc acgatctcgc cgtggtccat cacgtaggcg
     1501 cggtcggcga gctgcagggc gcgctcgaca ttctgctcga ccagcaggag cgtgatgccc
     1561 tgcttcttca tgcgcgcgaa cagctcgaac atctcgtcga ccagcaccgg catgatgcct
     1621 tccgatggct cgtcgagcat gatcagctgc gggtccgaca ccatggcgcg ggcaatggcg
     1681 agcatctgct gctcgccgcc cgacagcgtg tcggcggcct ggccgaggcg ctccttgagc
     1741 cgcggaaagg tctgcgcgat gcggtcgatc acctccgcct cgcgcgcgcg gttgggcgag
     1801 gcgacgaggc cgaggcgcag gttctcctgc acggtgagcc ccggcacaat gcggcgctcc
     1861 tccggcacgt aggcaagccc gagcgcgaag cggcgatgcg tcggctcggc gatgatgtcg
     1921 gcgccattga agcgcacctc gccgccgcgg cgcgccacga ggcccatgat cgagcgcagc
     1981 gtcgtcgtct tgccggcgcc gttgcggccg atcatgcaca ccgcctcgcc cttgccgacc
     2041 gcgaaggtga cgccctgcag cacgtggctg cggccgtacc aggcgttcag gtccttgacc
     2101 tcgagcatcg tcacaccgtc tggccgagat agacgcgccg cacctcgtcg tgccgcctga
     2161 tctcgtcggg cgagccctcg gcgagaagct ggccgtgatg cagcacgacg atgcggtcgc
     2221 tgatgcccat gacaagcttc atgcggtgct cgacggtgat caccgtgcgc tcctggttga
     2281 gcttcacgat cagatccatc atctggcggg cttcctccgg gctcatgccc gcggtcggct
     2341 cgtcgagcag gagcaggcgc gggtcgcagg ccagcgccac ggcgatttcc agggatcgct
     2401 ggtcgccatg cgcgagattg ccggccggct cgtggcgccg gtgcgccagc ccgacaagcc
     2461 cgagcaggct ttccgccttg tcggtgagct cgcgcaggcg ccagcgcggc gaccacaggt
     2521 cgaaagtcgt gcgcatggcc tgggcggcga cgcgcacgtt ctcgagcacg ctgagctgcg
     2581 ggaacaggtt ggtgatctgg aacgacttgg cgatgccgcg atgcgcgaag cggtgctgcg
     2641 gcagcccggt gatctcgtcg ccctggaaga agatcctgcc gctggtcggc gcgaaggcgc
     2701 ccgacagcac gttgaagaag gtgctcttgc cggcgccgtt cggcccgatg atcgaggtca
     2761 ggcggtcgcc gaagaaatcg accgacacgc cttgcagggc ggtgaagccg ccgaacttct
     2821 tgccgaccgc ttcggcccgc aggatgggcg tcgtcacggc cgccgtcatg agcgcagcca
     2881 gtgcagcagc gatccccaga tgccgcgcgg aaagaacagg atcagaagca cgaataccgt
     2941 gccgacgatg atctgccagt gggtggtata gacgacgatc acgtcctgca gcagcaggaa
     3001 gaggaaggcg cccaggaacg gcccgaagaa tgtccccatg ccgccgagca gcgtcatcat
     3061 caggacgttg gcagaggtga agtagtgcag cgtctcgatc ggcacgaccg agagatggat
     3121 cgcatagagc gcgccggcga gccccgagaa caggccggac aggacgaaca ccacccagcg
     3181 cacgcgcgtc acgtcgtagc cgcaggctcg ggcccgccgc tcgttctcgc gcagcgtctc
     3241 gatgacggcg ccgaacggtg agttcaggat gcgcgagaac acccacaggg cgagcgcgac
     3301 gaacagcagg atggcgtaat acttggtcgt cgggttgagc aggctgatat gcatcccgaa
     3361 cgcatcgatc gccggcacgt tgacgccgcg cagcccgtct tcgccgccgg tcagcgagac
     3421 ccactggaag acgatgtagt agacgacctg cgacagcgcc agcgtcacca tggcgaagta
     3481 gatgccgcgc gtgcgcgtcg cgaaccagcc gatgatcgcc gccgcgatgc cggccacgat
     3541 cacgccgagc ggcagcgcca cgaaccaggg cacgccgaac ttggcgatcg ggacgccgca
     3601 gccataggcg ccgcgcccga acagggccgc atgcccgaac gacagcatgc ccgcgtagcc
     3661 gtagaccagg ttgaacccca tcgcgaacag cccgtagatc aggatgttca cggcgagcgc
     3721 cttgtagggc gcgaaccacg ggaacacggc caggaacagg atcgcgacga ggacgcggtt
     3781 gcgcgtcacc cagccgatca gccccgccag cctggcgccg ttgggcgctc ttgcgccgag
     3841 cgccatgtcc gctgccttcg ccatggcgct cctactccat cagcccggcg cggccgaaca
     3901 ggccgcgcgg ccggaagacc aggaccagcg ccatcaggag gaacatcgac agggtcgcca
     3961 tctgcggaaa atagaacgag gtgaagctca cggtgatgcc gaccaggagg cccgccacca
     4021 cggcgccgag cagcgagccc atgccgccga ccaccgtgac gacgaaggcc tcgaccagca
     4081 ccggcacgcc catttcggga aagacgccgc ggatcggcgc cgccaggacg ccggcgaggc
     4141 cggccagggc gacgccgatg ccgaacacga cgagccacac gcggctgata ttgacgccca
     4201 gaacctgcac gatctcctgg tcgcgcgcgc cggcacggat gatcaggccg tagggcgtct
     4261 tctcgagaag aaaccagaga gcggccagca gcaccgcggt gacgaggatc aggaacaggc
     4321 ggtatttcgg gaagaagaag aagccgagat cgacggcgcc gctcagcgcc tcgggcgccg
     4381 ggaacgggat gccttcggtt cctgcgaaga tgcgcaccgc gtcgaggatg atgaggccaa
     4441 gcccataggt gaggagcagc gggtaatcga tcccgcggcc gtaaagcggg cgcaccagga
     4501 agcgctccga cagcatgccg agcgcgccga cgacgagcgg cacggcgaac agggcgaacc
     4561 agaaattccc gctcagggcg agcgcgaagg cgccgacata ggcgcccagc atgaagaact
     4621 ggctgtgcgc gaaattgacg atcgtgagta ggccgaagat cagcgagatg ccgagcgcca
     4681 ccagcacgaa gatcgagccg agcgccaggc cggtgaacag ttgcagcaga aacaggtcga
     4741 gggtcatcag agcactttgc tgctgtcatg gccgggcttg tcccggccat cccgatcaag
     4801 caagccgcag catctttcgg atcgagatgc ccggcacagg gccgggcatg acaatggtgt
     4861 ggatagggtt ggaaatcttc ctcttaaggg agacgttcgg cgttacgcct tgtgtcccag
     4921 ctcctggcag gtgcgcagga ccttctcgtc ggccgcctcg gtgtgcacga cgtcgaaaat
     4981 gtcccacttg cccttcatgc tcttttccgg cttcgattcg atcacgagca ccgactgcac
     5041 cgcctggtga tcgcatttgc ggaaatactg ctcgcccttg taggcgtcgt atttcagctg
     5101 ctccatggcg gcgatgaccg cgtcggtatc gctcgagccg gctttcttga cgccttcgag
     5161 caggccgtgc acgccggcaa agccgagcgc gccgtaggcg gtcggcaccg cgtcgccgtg
     5221 cttcttgcgg taggcgtcgt tgaagcgctt ggccgacggc accttgtcct cgatcgccca
     5281 gtaatagttg gcgccgccga tgaccccctc gaagggcgcg ccgccgccgg cgaggcgctg
     5341 cgtgtcgagc aggaccggat agacgatctt catctgccgc ttgaggccga aatcgttggc
     5401 ctgcttgacg gtgttgagct ggtcgcggcc gaaattgacg accacgagca cgtccggccg
     5461 cgccgcctgg atgcgcggaa agaaggtgga gaagtcggtc gtgccgagcg ggtgccggat
     5521 ctcgaccgcc tcctcgatct tcatctcctt ggcgatgcgc cggaagccgc gcagcatctc
     5581 gtgcccgtag gcgtagtcgg cgatcaggta ggcgaccttc ttggcgccga gcttgccgaa
     5641 ggcgtagcgc ccgacggcgc ccgacgtcat gtgcgggttg agcgcctcgt ggaacgtgaa
     5701 cctgctgaag tccgacgcct cgttgatcgt gtccgactgg cttatcgagt tgtagatcac
     5761 gccgcgcttg cttgtgacct ggttcaccga gagctgcacc gacgccgaca gcgagccgca
     5821 caggaagttg accttgtcgg attcgatcaa ctcgagcgcg cgcgtcgccg cctcgccagg
     5881 atcgagcttg tcgtcgcgca ccacgagctc ggccttgcgg cccttgagcc cgccgccctc
     5941 gttgaagaaa tcgacggcga gctgggcgca gcgcacctgg tcgttcgcct ccgtgctgta
     6001 ggggccgctc agcggcaccg ggaagccgat cttgatcggc ccttcctgcg cccgcacgat
     6061 gttgaacgag aacggcagga cggccgcggc gccgccggcg gccgcggttc cgagcaggcc
     6121 gcggcgcgtg agatcgagag gttttcggct cattgtttcc ttccctttgg cttttcgtca
     6181 gttgatacaa aaccctggcg gcgcgcaacc ggccgggccg gctatcccga ggccattcct
     6241 agacccgccc gagcgcgcgc aggacgaggt ccggcgtgag cgggatgtcg gtgatgcaca
     6301 cgtcgaaggg ctttaaggcg tcgttgaccg cgttggcgac ggccgccgcg gcaccggccg
     6361 ttcccgcctc cccggcaccc ttggcgccga gctccgattc cagcgtcggc gagacgacgt
     6421 gcccgacctc gatgtcgggc atctccgccg ccatcggcac gaggtagtcg gccatgttgc
     6481 cgttcatgag ctggccctgc tggtcgtaga ggcaatgctc gaacagggcc ggcccgaggc
     6541 cctgcacgac gcc
//
LOCUS       DATAIQ010000037         1653 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_323790, whole genome shotgun sequence.
ACCESSION   DATAIQ010000037 DATAIQ010000000
VERSION     DATAIQ010000037.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1653)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1653)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1653
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_323790"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1212
                     /locus_tag="VHN20_00550"
     CDS             <1..1212
                     /locus_tag="VHN20_00550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010682272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase S10"
                     /protein_id="HEX2724288.1"
                     /translation="ASAYLHLGVLGPWRLPLDGPSISPSSPPKVVPNAETWLDFTDLV
                     FIDPVGTGYSRANGSEEDIRNRYYTVEGDIETLSAVVARWLRSRDRMSSPKFYVGESY
                     GGFRGPLLAEKLQSDIGVAFSGLVLVSPVLDFTWLSPPRHAPWLHVARLPSLAAACLE
                     RKGALARDALRDVEAYAAGEYLGDLLRGLQDAAVLDRMSSRVSELVCLDPALVRRIAG
                     RIDVSTFQREFARASGRVVSAYDTAISAQDPDPTAATPRFEDPGLAALTAPLTSAILD
                     HLARTLHWKVPDQRYQLLNGQVNGAWRWSRGRSQPEALSNLRQALALDGKLRTLVVHG
                     FTDLVTPYFANQILLNQLADFGPGKRVGLNVYPGGHMFYFREDARGAFRRDAMQLYRE
                     ALDARQNDKAP"
     gene            1248..1613
                     /locus_tag="VHN20_00555"
     CDS             1248..1613
                     /locus_tag="VHN20_00555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015932009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724289.1"
                     /translation="MTRLLLAVALVALAALPGCNERAGPVVTAAVSAAPPAAAPAFSG
                     PVLGPDGRCQGQSAATAAAIETGIGECDLVRLKGKEPTDVLIGESGKGHREVQVLYSE
                     PGGREIYLFVNNRLDRIVR"
BASE COUNT          229 a          613 c          551 g          260 t
ORIGIN      
        1 gcgtcggcct atctgcatct cggcgtgctc ggcccgtggc gtctgccgct ggacggcccg
       61 agcatcagcc cgtccagccc ccccaaggtc gtccccaacg ccgagacctg gctcgacttc
      121 accgatctcg tgttcatcga cccggtgggc accggctaca gccgcgccaa cggctccgag
      181 gaggacatcc gcaaccgcta ttatacggtc gaaggcgaca tcgagacgct ctcggcggtc
      241 gtggcgcgat ggctgcgcag ccgggaccgc atgtcgtcgc cgaaattcta cgtgggcgaa
      301 agctatggcg gcttccgcgg cccgctgctg gcggagaagc tgcaaagcga tatcggcgtg
      361 gctttcagcg gcctcgtcct ggtctcgccg gtgctcgatt tcacctggct cagcccgccg
      421 cggcacgcgc cgtggctgca cgtggcgcgg ctgccgtccc tggcggccgc gtgcctggag
      481 cgcaaaggcg cgctggcgcg cgacgccttg cgcgacgtcg aagcctatgc ggccggcgag
      541 tatctcggcg acctgctgcg cgggcttcag gacgcggcgg tgctggaccg gatgagcagc
      601 cgcgtgtcgg agctcgtctg cctcgacccg gcgctcgtcc gccgcattgc cggccgcatc
      661 gatgtctcga cgttccagcg cgagttcgcg cgcgcctcgg gccgcgtggt cagcgcctac
      721 gacaccgcca tcagcgccca ggaccccgat ccgacagccg caacgccgcg cttcgaggac
      781 ccgggcctcg ccgccctgac ggcccctctg accagcgcca tcctcgatca tctggcccgc
      841 actctgcact ggaaggtgcc ggaccagcgc taccagctgc tcaacggcca ggtgaacggc
      901 gcgtggcggt ggagccgcgg gcgcagccag ccggaggccc tgagcaacct gcgccaagcg
      961 ctggcgctcg acggcaagct tcgcaccctc gtcgtgcacg gcttcaccga tctcgtgacg
     1021 ccgtatttcg ccaaccagat cctgctcaac cagctggccg atttcggccc gggcaagcgc
     1081 gtcggcctca acgtctatcc gggtggccac atgttctatt tccgcgagga cgcgcgcggg
     1141 gccttccgcc gcgatgccat gcagctatat cgcgaagcgc tcgacgcccg ccagaacgac
     1201 aaggcgcctt aatctttgac tcgccggatc atgctatggc cggggccatg actcgcctcc
     1261 tcctcgccgt cgccctggtc gcgctggccg ctttgccggg ctgcaacgag cgcgccggcc
     1321 ccgtcgtcac ggcggccgtg tcggctgcgc cgcctgccgc cgcgccggcc ttttccgggc
     1381 cggtgctcgg gccggacggg cgctgccagg ggcagagcgc cgcgacggcg gccgcgatcg
     1441 agacggggat cggcgaatgc gacctcgtgc gcctcaaggg caaggagccg accgacgtcc
     1501 tgatcggcga gagcggcaag ggccaccgcg aggtgcaggt gctctattcc gagccgggcg
     1561 ggcgcgagat ctacctgttc gtgaacaacc gcctcgaccg catcgtcaga taacgcttcc
     1621 cgcgctcttc cctccccctt tgcggggagg gcc
//
LOCUS       DATAIQ010000038         2043 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_93746, whole genome shotgun sequence.
ACCESSION   DATAIQ010000038 DATAIQ010000000
VERSION     DATAIQ010000038.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2043)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2043)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2043
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_93746"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..179
                     /locus_tag="VHN20_00560"
     CDS             <1..179
                     /locus_tag="VHN20_00560"
                     /EC_number="1.14.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008834136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HEX2724290.1"
                     /translation="WRDEEAIARWRNHLQHRQVQRRGRGGVFADYRLRVAEIVRDYGP
                     RDRAEAPVDSVTLA"
     gene            286..660
                     /gene="gcvH"
                     /locus_tag="VHN20_00565"
     CDS             286..660
                     /gene="gcvH"
                     /locus_tag="VHN20_00565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012114228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein GcvH"
                     /protein_id="HEX2724291.1"
                     /translation="MTTRYTKEHEYIRVEGDTGVVGITDYAQEQLGDVVFIELPEVGK
                     VVAKGDEAAVVESVKAASEIYAPVSGAVVAVNTELQGAPGMVNEDPTGKGWFIKLKIN
                     DPAEVESLMTEAQYQTFLKSIS"
     gene            675..2015
                     /gene="gcvPA"
                     /locus_tag="VHN20_00570"
     CDS             675..2015
                     /gene="gcvPA"
                     /locus_tag="VHN20_00570"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014891519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004375 - glycine dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0006546 - glycine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase
                     subunit GcvPA"
                     /protein_id="HEX2724292.1"
                     /translation="MRYLPLSDANRDDMLARIGVGRIDDLFADVPNVALLREPPDLPR
                     RKGELEVTRLLSRMAERNVPASSVPFFVGAGAYKHHVPASVDHLIQRSEFLTSYTPYQ
                     PEIAQGTLQYLFEFQTQVANLTAMEVANASMYDGSTGAAEAVLMAHRVTKRRKAVLSG
                     GLHPQYADVIKTFSRMANDEVVALAPDVTAAEDLGARIDDSVSCVVVQTPDFFGNLRD
                     LRAVAEKAHAQGALLVAVFTEAVSLGIVTPPGGMGADIVAGEGQSIGNALNFGGPYVG
                     LFATRQKFVRQMPGRLCGETVDADGQRGFVLTLSTREQHIRRDKATSNICTNSGLCCL
                     AFTIHMTLLGETGLKRLARINHANAVKLADGLAGVPGIKVLNRSFFNEFTVRLPGAAA
                     DLVEVMAERGILAGVPVSRLLPDAGLDDLLLVASTEVNTDEDRAALVAGLKEIV"
BASE COUNT          345 a          682 c          688 g          328 t
ORIGIN      
        1 tctggcgcga cgaggaggcg atcgcccgct ggcgcaacca tctccagcat cgccaggtgc
       61 agcgccgggg acggggcggc gtgttcgccg actaccggct cagggtggcc gagatcgtgc
      121 gcgactacgg gcctcgcgat cgcgccgaag cgccggtcga cagcgtcacg ctcgcgtaac
      181 cgctatcccg ggcggccgca ggccgctccg ggatcgtcgg atgatgactt gatgacgatc
      241 ccggcgggcg ggtccgcact ggccgggtcg acagggagaa ccaggatgac gacacgctac
      301 accaaggagc acgaatacat ccgcgtcgag ggcgacacgg gcgtggtcgg catcaccgat
      361 tatgcccagg aacagctcgg cgacgtcgtg ttcatcgagc tgcccgaggt cggcaaggtc
      421 gtggccaaag gcgacgaggc cgcggtcgtc gagagcgtca aggcggccag cgagatctac
      481 gcgcccgtgt cgggcgccgt ggtcgcggtc aataccgagc tgcagggcgc cccgggcatg
      541 gtcaacgagg atcccaccgg caaaggctgg ttcatcaagc tcaagatcaa cgacccggcc
      601 gaggtcgaga gcctgatgac ggaagcgcaa taccagacct tcctcaaatc gatcagctga
      661 gaccggcgac catcatgcgc tatcttccgc tgtcggatgc caaccgtgac gacatgctcg
      721 cccgcatcgg cgttggccgg atcgatgacc tgttcgccga cgtgccgaac gtcgcgcttt
      781 tgcgcgagcc ccccgacctg ccgcgccgca agggcgagct cgaggtgacg cgcctgctct
      841 cgcgcatggc cgagcgcaac gtgcctgcct cgtcggtgcc gttcttcgtc ggggcaggcg
      901 cttacaagca ccacgtcccg gcgagcgtcg atcacctgat ccagcgttcg gaattcctga
      961 ccagctatac gccctaccag ccggagatcg cgcaggggac gctgcaatat ctgttcgagt
     1021 tccagacgca ggtcgcgaac ctgaccgcga tggaggtggc gaacgcgtcc atgtacgacg
     1081 gctcgaccgg cgcggcggag gcggtgctga tggcgcatcg cgtcaccaag cggcgcaagg
     1141 ccgtgctgtc tggcggcctg catccgcaat atgccgacgt catcaagact ttctcgcgca
     1201 tggccaacga cgaggtcgtg gcgctcgcgc cggacgtgac cgcggcggaa gatctcggcg
     1261 cgcgcatcga cgacagcgtc tcctgcgtcg tggtgcagac accagacttc ttcggcaacc
     1321 tgcgcgatct gcgcgccgtt gccgagaagg cgcacgcgca aggcgcgctg cttgtcgccg
     1381 tcttcaccga agctgtctcg ctcgggatcg ttaccccgcc gggcgggatg ggtgcggata
     1441 tcgtggccgg ggaaggccag tcgatcggca acgccctgaa tttcggcggc ccgtatgtcg
     1501 ggctgttcgc gacgcgccag aaattcgtgc gtcagatgcc tggccgcctg tgcggagaga
     1561 ccgtcgacgc ggatggccag cgcgggttcg tgctgacgct gtcgacgcgt gagcagcaca
     1621 tccgccgcga caaggcgacg tcgaacatct gcaccaattc cggcctctgc tgcctcgcct
     1681 tcacgattca catgacgctg ctcggggaga cgggcctcaa gcgtcttgcg cgcatcaatc
     1741 acgccaatgc cgtcaagctc gccgacgggc tggcgggcgt gcccggcatc aaagttctca
     1801 accggagctt cttcaacgag ttcacggtgc gcctgccggg tgccgccgcc gacctcgtcg
     1861 aggtcatggc ggagcgcggc attctcgccg gcgtgccggt gtctcgcctg ctgccggatg
     1921 ccggtctcga cgaccttctt ctcgtcgcgt cgaccgaagt gaacaccgat gaggaccgcg
     1981 ccgcgctggt cgccgggctc aaggagatcg tctgacatgc tgaaccgcca gggccggccg
     2041 acc
//
LOCUS       DATAIQ010000039         2091 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_139196, whole genome shotgun sequence.
ACCESSION   DATAIQ010000039 DATAIQ010000000
VERSION     DATAIQ010000039.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2091)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2091)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2091
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_139196"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(247..1281)
                     /locus_tag="VHN20_00575"
     CDS             complement(247..1281)
                     /locus_tag="VHN20_00575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724293.1"
                     /translation="MWAWRSVAAVAAIAAGLVWTHGARADAVADFYKGKTVSVIVGFG
                     PGGGYDQYARTLARHLGRHIPGQPSVVVQNMDGAGSVRASNHVYAVAPKDGTVIAAVN
                     QNMPMYQLLGGAGAQFKAAELQWLGSMAYSNGLVYTWHASGVKTLEEAKTREVVLGGT
                     GPSADSYIFPTLINALYGTRFKVITGYAGTGQINLAMERGEVMGRGGNTWASVSSANK
                     AWLDEKKISLLVQIGFKSEPELTEVPMLLDLVPTPEAKQIVTVVALPTALGYAHWVAP
                     GVPKERVEALRAAYAATLKDPAFLAEADKASMLIRPQTGAELEELVKRAAATPKAVLD
                     RTAQILNWSN"
     gene            complement(1371..>2091)
                     /locus_tag="VHN20_00580"
     CDS             complement(1371..>2091)
                     /locus_tag="VHN20_00580"
                     /inference="COORDINATES: protein motif:HMM:NF044751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEX2724294.1"
                     /translation="QDSVDLGWKLEACLRGWGGPELLRSYQVERRPVAIRNVQEASGN
                     LRRMLGPRLQKPPREAFKPGPEGDRARREFGDAYTKEMAREWFANGIHLGYRYEGSPI
                     VVPDGTPEPPDTVSTYTQTARPGHRAPHAWLADGRSTLDLFGRGFVLLRFGSRPAPAD
                     GIRQAAADKGVPLEVVDIDDLEIGKLYENQLVLVRPDGHVAWRADVEPSSAEAIIEVV
                     RGAGATSGLSAATPAVQVAAT"
BASE COUNT          320 a          728 c          680 g          363 t
ORIGIN      
        1 gcggaagcac ggcgcggggc ggtggcggag aaccggagcc ggatcctgca gctctggaag
       61 cgggccgcgg cagcttgcgg ctgcggccgc caacattaga gcgtgatcca gcgaagtggc
      121 cgccacttac ttcgtcgggc aagatcatgc gatggcgaaa acatgagcag gatcgcttca
      181 atctgaagcg atcctccgcc aatgtgggat gcttcgatcg aagccgctcc cgctccagtc
      241 gacggctcag ttgctccagt tcaggatctg cgccgtcctg tcgagcaccg ccttcggggt
      301 cgcggccgcg cgcttcacca gctcctccag ctccgcgcct gtttgcgggc ggatgagcat
      361 gctggccttg tcggcttcgg ccaggaacgc aggatccttc aaggtcgccg cataggcggc
      421 gcgcagcgcc tcgacgcgct ccttcggcac tccgggcgca acccagtgcg catatccgag
      481 cgccgtcggc agggccacga cggtgacgat ctgcttggcc tcgggcgtgg gcacgaggtc
      541 gagcagcata ggcacctccg tgagctcggg ttccgacttg aatccgatct gcaccagcag
      601 gctgatcttc ttctcgtcca gccacgcctt gttggcgctg ctgacgcttg cccaggtgtt
      661 gccgccgcgg cccatgacct cgccgcgctc catggccagg ttgatctggc ccgtgccggc
      721 atagccggtg atgaccttga accgggtgcc gtagagggcg ttgatcagcg tcgggaagat
      781 gtacgagtcc gccgacggcc cggtgccgcc gagcaccacc tcgcgcgtct tcgcctcctc
      841 cagggtcttc acgccgctcg cgtgccatgt gtaaacgagg ccgttcgagt aggccatgct
      901 gccgagccac tgcagctcgg cggccttgaa ctgcgccccg gcgccaccca gaagctggta
      961 catgggcatg ttctggttca cggccgcgat gacggtgccg tctttaggcg ccaccgcata
     1021 gacgtgattc gaggcacgca cgctgccggc gccgtccatg ttctggacaa cgacggaggg
     1081 ctggccggga atgtgcctgc cgagatgccg cgccaacgtg cgcgcgtatt gatcatagcc
     1141 gccgcccggt ccgaagccga cgatgacgct caccgtcttg cctttgtaga agtcggccac
     1201 cgcatcggct cgcgcgccgt gggtccagac aagaccagcc gcgatcgccg cgacagccgc
     1261 tacactcctc caggcccaca tcgatgtccc cccgatcgtt atcacaaacc tgttctcggc
     1321 accgcacccc ttcgggcatg aatttgaagc agtctcgcct gcccgcctgg ttaggtggcg
     1381 gcgacctgga ccgccggcgt tgcggcgctc aggccgcttg ttgcgccggc gccccgaacc
     1441 acctcgatga tcgcctccgc gctgctcggc tccacgtcgg cgcgccacgc cacgtggccg
     1501 tcgggacgaa cgagcaccag ctggttttca taaagcttgc cgatctcgag atcgtcaatg
     1561 tcgacgacct cgagcggcac gcccttgtcg gcggcggcct gcctgatccc atccgcggga
     1621 gcgggccggc tgccgaagcg caacaacacg aagccgcgcc cgaacagatc cagcgtcgat
     1681 cgtccgtccg cgagccaggc atgaggcgcg cggtggcccg gccgcgccgt ttgcgtgtag
     1741 gtgctgaccg tgtctggggg ctctggcgtg ccgtcgggca cgacgatcgg cgagccttcg
     1801 tagcggtagc cgagatggat gccgttggcg aaccactcgc gcgccatctc tttggtgtag
     1861 gcgtcgccga actcacggcg ggcgcgatcg ccctccgggc ccggcttgaa cgcttcgcgc
     1921 ggcggcttct gcaggcgcgg tccaagcatg cggcgcaggt tgccgctcgc ctcctggacg
     1981 ttgcggatcg ctaccggccg ccgctcgacc tgataggatc gcagcaattc cggtccgccc
     2041 cagccgcgca gacaggcttc gagcttccaa ccgagatcga ccgaatcctg g
//
LOCUS       DATAIQ010000040         4585 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_370831, whole genome shotgun sequence.
ACCESSION   DATAIQ010000040 DATAIQ010000000
VERSION     DATAIQ010000040.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4585)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4585)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4585
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_370831"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..575)
                     /locus_tag="VHN20_00585"
     CDS             complement(<1..575)
                     /locus_tag="VHN20_00585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724295.1"
                     /translation="MAEKTIVSEDLAQKFATEKDSPYLRWVRSEGLDIIGAHYVPNLR
                     TVALKPWPRRGGAGVFINHEASRTSNDCYVCEIPAGGKLAPQRQLFEEMILVLDGRGS
                     TTVWNDAGQRITFEWKAGAIFAIPLNTWHQHFNGSGPQSARYVAVTNCPSVLNLYDDV
                     DFVFNTGFDFKNRFAGEPDYFSAKGEQIGFL"
     gene            complement(728..1474)
                     /locus_tag="VHN20_00590"
     CDS             complement(728..1474)
                     /locus_tag="VHN20_00590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007753509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX2724296.1"
                     /translation="MASTRPLDGQVAIVTGSVRRIGKAMAAALARDGAAVVIHARSSR
                     EEAQAAAREIEESGGRALVQLANVTEEAAVTRMVDAVMSAFGRVDILVNNAADRGEAP
                     FLEMSFAEWRKLTGIILDGAFLCSRAVLAHMVARGHGRIINIGGVSAHLGASGRAHIG
                     TAKAGLIGFTRALALEFAEKGVTVNCVVPGRIGGERSATSGKGISHQPPVGREGRAEE
                     VAEIVRTLCQPSGGYVTGQTIHVNGGLYLP"
     gene            1861..3006
                     /locus_tag="VHN20_00595"
     CDS             1861..3006
                     /locus_tag="VHN20_00595"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006021559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003871 -
                     5-methyltetrahydropteroyltriglutamate-homocysteine
                     S-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HEX2724297.1"
                     /translation="MRRDKPPFRADMVGSLLRTAPLKDARDKRAKGAITAEQLREVED
                     REIRGIIRKQEEIGLQAVTDGEFRRAWWHFDFLGGLDGVELIDVEHGIQFAGVQTKAQ
                     APRVMGKIGFSGHPMLAHFRFLKENTARVPKMTIPGPSMLHYRGGRKMINAGVYPDMD
                     GFYADLGAAYNKAVKAFYDAGCRYLQLDDISFAYLCDPNQRQMLRERGDDPDRQPDIY
                     AGLVRAALADKPADLTITMHLCRGNFRSTFVASGGYEPIAETLFNAMPVDGYFMEWDT
                     DRAGGFEPLRFLPKGKSVVLGLVTSKTGTLENKDDLKRRIDEATRYANLDQLCLSPQC
                     GFASTEEGNILAEDEQWAKLRMIVEIAEEVWGSAAKAAGKKAAVQGS"
     gene            3080..4036
                     /locus_tag="VHN20_00600"
     CDS             3080..4036
                     /locus_tag="VHN20_00600"
                     /inference="COORDINATES: protein motif:HMM:TIGR02122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HEX2724298.1"
                     /translation="MARLVRAAALAALCIWPHLAVAQPLGLGTSPQATLTYAIGAAVS
                     KVLAEKASMQSRVQPSSGTGAMIPLVNSGEIDVGFCNTQELYDAFHGVGTFDKRPNPK
                     LRAVGVLFPIRVGLFVRNDSPIRSVKDLKGRTITYGYTSQEIIRTTIDAMLATAGLSI
                     NDMRPVLVPNLIRGVDELISGRADVSTFAIGTAKVAEADAAVGIRYLPLDDAAASVSA
                     MQKWFPVAYMGKVEPAPHLPGVREPIMTMHYDYTVFANADLPVERVKTITRVIAENKE
                     TLSQSLPAFRDMNPGRLYNKIKVPFHDGALAYFRDKGIEESQ"
     gene            4120..>4585
                     /locus_tag="VHN20_00605"
     CDS             4120..>4585
                     /locus_tag="VHN20_00605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724299.1"
                     /translation="MPTRALEPVKLVLRAAIVVAVIAWIADIPGRLGVALFTEQMLVA
                     VLGFALALCFLVFPWRARHRGEVAVAEAEMGKAAAPADAIDVVCAALALTACLYVAVR
                     YQSLITELVYRPWDGVIVATVIVVLVLEATRRVTGLALVLIVLALCVHALLGW"
BASE COUNT          761 a         1537 c         1536 g          751 t
ORIGIN      
        1 atcaggaagc cgatctgctc gcccttggcg gaaaaatagt ctggctcgcc ggcgaagcgg
       61 ttcttgaagt cgaaccccgt gttgaagacg aaatcgacgt cgtcatagag attgaggacc
      121 gacgggcagt tggtgaccgc gacgtagcgg gcggattgcg ggcccgagcc gttgaagtgc
      181 tggtgccacg tgttgagcgg gatcgcgaag atggcgccgg ccttccattc gaaggtgatg
      241 cgctggccgg catcgttcca caccgtcgtc gagccgcggc cgtcgagcac caggatcatc
      301 tcttcgaaca gctgccgctg cggcgcgagc ttgccgcccg ccgggatctc gcagacgtag
      361 cagtcgttcg aggtgcgcga cgcctcgtgg ttgatgaaca cgccggcgcc gccgcggcgc
      421 ggccacggct tcagcgcgac ggtgcgcagg ttggggacgt aatgggcgcc gatgatgtcg
      481 agcccctcgg agcggaccca gcgcagataa ggcgagtcct tctcggtggc gaacttttgc
      541 gccagatctt ccgaaacgat cgttttttcc gccaccggcg accctccttt tcccttggcc
      601 gtcagctgcg tggccggcgg ctcttgcctg ctgcctcacc tacaacattg gatagcgcgg
      661 gcaagcgtcg ccgccggagc gcagcgccct gccctgcccc gctctgaatg cgcgggccgc
      721 ggccggctca aggcagatag aggccgccat tgacgtggat cgtctggccg gtgacgtagc
      781 cgccgcttgg ctggcacagc gtgcgcacga tctcggcgac ctcttccgcc cggccttcgc
      841 gcccgactgg cggctggtgc gagatgccct tgccggacgt ggccgagcgc tcgccgccga
      901 tgcggccggg caccacgcag ttcacggtga cgcccttctc cgcgaactcg agcgccagcg
      961 cgcgcgtgaa gccgatcagg cccgctttgg cggtgccgat atgcgcgcgc ccggaggcgc
     1021 cgagatgcgc gctgacgccg ccgatattga tgatccgccc gtggccacgc gccaccatgt
     1081 gcgccaggac cgcgcgcgag cacaggaacg cgccgtcgag gatgatgccg gtgagcttgc
     1141 gccattccgc gaacgacatc tccaggaacg gcgcctcgcc gcgatcggcg gcgttgttga
     1201 cgaggatatc gacgcgaccg aaggcggaca tcacggcgtc caccatgcgc gtgacggccg
     1261 cctcttcggt gacattggcc agctgcacga gcgcgcggcc gccgctttcc tcgatctccc
     1321 gggccgccgc ctgcgcctcc tcgcgcgagg agcgggcgtg gatgacgacc gcggcgccgt
     1381 cgcgcgccag cgccgccgcc atggccttgc cgatccggcg cacgctgccg gtcacgatcg
     1441 cgacttgccc gtcgagaggc cgcgtggaag ccaaggtttt ctccaggaga ttgaagcggg
     1501 ggatgccgtt agaccgcgcg gttcttccct ggtcaaccgg cagagaacgt cacggcttgc
     1561 cgcgttggtg gacgtgaggc gcgggtcggg gccagcctcg cgggttaggg cagcggcgca
     1621 gcattttgct gaaatttgct gggtctagaa caattgtaag ttgcgtaatt atggatattc
     1681 tcttgatagg tgcgcgggcg gcccggccgc gctgatcccg cacgggacgt ccccggagcg
     1741 tcgcaaacca ccgcgcaacg cgccggcgcc ggtctggact tgccgcggtg atcggcgcaa
     1801 acgaaacgcg tgcccggcga caagaccggg ccgatgaaga agcgccggga gaaacgaacg
     1861 atgaggagag acaagccgcc tttccgcgcc gacatggtcg gcagcctgct gcgcacggca
     1921 cccctcaagg acgcgcgcga caagcgcgcc aagggcgcca tcacggccga gcagctgagg
     1981 gaggtcgagg accgcgagat ccgcggcatc atccggaagc aggaggagat cgggctacag
     2041 gccgtgaccg acggcgagtt ccgccgtgcc tggtggcatt tcgatttcct cggcggcctc
     2101 gacggcgtcg agctgatcga cgtcgagcac ggcatccagt tcgccggcgt gcagacgaag
     2161 gcgcaggcgc cgcgcgtcat gggcaagatc ggcttctcgg gccacccgat gctcgcgcat
     2221 ttcaggtttc tcaaggagaa caccgcgcgg gtgccgaaga tgacgatccc gggcccgagc
     2281 atgctgcact accgcggcgg ccggaagatg atcaatgccg gcgtctatcc cgacatggac
     2341 ggcttctatg cggacctcgg cgccgcctac aacaaggccg tcaaggcgtt ctacgacgcg
     2401 ggctgtcgct acctccagct cgacgatatc tcgttcgcct atctgtgcga cccgaaccag
     2461 cggcagatgc tgcgcgagcg cggcgacgat cccgacagac agccggacat ctatgccggc
     2521 ctcgtgcggg ccgcgctcgc cgacaagcct gccgacctga ccatcacgat gcacctgtgc
     2581 cgcggcaatt tccgctccac cttcgtggct tccggcggct acgagccgat cgccgagacc
     2641 ctgttcaacg ccatgccggt ggacggctac ttcatggagt gggacacgga ccgtgccggg
     2701 gggttcgagc ccctgcgttt cctgcccaaa ggcaagagcg tggtgctcgg cctcgtcacc
     2761 tccaagacgg gcaccctcga gaacaaggac gacctgaagc gccgcatcga cgaggcgacc
     2821 cgatacgcca atctcgatca gctatgcctc agcccgcaat gcggctttgc ctcgaccgag
     2881 gagggcaata tcctggccga ggacgaacaa tgggccaagc tcaggatgat cgtcgagatc
     2941 gccgaggagg tgtggggaag cgccgccaag gccgcgggca aaaaagcggc cgtgcaaggc
     3001 agttgaggcg tgatcgggcc ggcgcgatcc tttgcgtcgc cagccccgag cgccacaaac
     3061 caaatccagg gaggaaggga tggcaagact cgttcgcgcg gcggctctgg ccgcgctgtg
     3121 catctggccg catctcgccg tggcgcagcc tctggggctc ggcacgagtc cgcaggcgac
     3181 gctgacctac gccatcggcg cggcggtctc caaggtgctc gccgagaaag ccagcatgca
     3241 gtcgcgcgtg cagccgtcga gcggcaccgg cgcaatgatc ccgctggtca attccggcga
     3301 gatcgacgtc ggcttctgca atacccagga actttacgac gcattccacg gcgtcggcac
     3361 gttcgacaag cggcccaacc cgaagctgcg cgccgtcggc gtgctgttcc cgatccgggt
     3421 cggcctgttc gtgcgcaacg actcgccgat caggtcggtg aaggacctca aggggcgcac
     3481 gatcacctac ggctacacga gccaggagat catcaggacc acgatcgacg cgatgctggc
     3541 gacggccggg ctcagcatca acgacatgcg tccggtgctc gtgccgaacc tcattcgggg
     3601 cgtcgacgag ttgatcagcg ggcgcgccga cgtttcgacc ttcgccatcg gcaccgccaa
     3661 agtcgccgag gccgacgcgg cggtcggcat ccgttatctg ccgctcgacg acgccgcggc
     3721 ttccgtctcc gccatgcaga aatggttccc ggtcgcctac atgggcaagg tcgagccggc
     3781 gccgcatctg ccgggcgtgc gcgaaccgat catgacgatg cactacgatt acaccgtgtt
     3841 cgccaacgcc gatcttccgg tcgagcgcgt caagacgatc acgcgggtga ttgccgagaa
     3901 caaggaaacg ctctcgcaaa gtcttcccgc gttccgcgac atgaaccccg ggcgcctgta
     3961 caacaagatc aaggtcccct tccacgacgg ggcgctagcg tatttccggg acaagggcat
     4021 cgaggagagc cagtgagccc tgcgacccgc cgtattgcgc gcaacgttgc gcagttgcgc
     4081 gcacgtattg cgttgtatcg ttcagtatcg agggcatgaa tgccaacgcg cgcgctcgag
     4141 cccgtgaagc ttgtcctgcg cgccgccatc gtggtcgcgg tgatcgcctg gatcgccgac
     4201 attcccggcc ggctcggcgt cgcgctgttc accgagcaga tgctcgtcgc cgtgctcggc
     4261 ttcgcgctgg cgctctgctt cctggtgttt ccgtggcgtg cccgccatcg cggcgaggtc
     4321 gccgtcgccg aagcggagat gggcaaggcg gcggcgccgg ccgacgcgat cgacgttgtc
     4381 tgtgcggcgc tcgccctcac cgcctgcctc tacgttgccg tccgctacca gtcgctgatc
     4441 accgagctcg tgtaccgtcc ctgggacggg gtgatcgtcg cgaccgtgat cgtcgtgctc
     4501 gtgctcgagg cgacgcgccg cgtcaccggc cttgccctcg tgctgatcgt gctggccctg
     4561 tgcgtccatg cgctgctcgg ctgga
//
LOCUS       DATAIQ010000041         4825 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_231475, whole genome shotgun sequence.
ACCESSION   DATAIQ010000041 DATAIQ010000000
VERSION     DATAIQ010000041.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4825)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4825)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4825
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_231475"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..206)
                     /locus_tag="VHN20_00610"
     CDS             complement(<1..206)
                     /locus_tag="VHN20_00610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010683557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX2724300.1"
                     /translation="MTPAEPGSRSALKVDLSGRSALVTGASGGLGRHFAGVLAAAGAK
                     VALAARRRELIDDACAEIARGGGDA"
     gene            complement(203..1468)
                     /locus_tag="VHN20_00615"
     CDS             complement(203..1468)
                     /locus_tag="VHN20_00615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013168951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn-dependent hydrolase"
                     /protein_id="HEX2724301.1"
                     /translation="MTPRTNRRIHGARLWGSLMDMAAIGATPKGGVRRLALSDLDRQG
                     RALFRTWCETAGLSVRVDAIGNMFARREGRDPTRPPVLFGSHLDSQPSGGKFDGALGV
                     LAGLEVVRTLNDLDIVTEAPIELVNWTDEEGSRFGHSLMGSGVWSGAFAMDEAEAFTD
                     IDGVSVGEALDATGIRGPEAPTQFAADAYFELHIEQGPILERERKMIGVVTGAQAQIW
                     YDAVVTGQDAHAGTTPPSTRKDALVCAARIIDLVDCLMRARGEDGRGTVGQLSVLPNS
                     RNVIPGEVRFSVEFRHPSGHEVERLNAAFTHEAQIIADACSVTLTLTPLFTLPAQQFD
                     PACVALVREAAAKLGLPARDIVSGAAHDAVHVARCLPAAMIFTPCKDGLSHNEAESIL
                     PEEAEAGCQVLFEVVLARANVPRRDGGRA"
     gene            complement(1493..2308)
                     /locus_tag="VHN20_00620"
     CDS             complement(1493..2308)
                     /locus_tag="VHN20_00620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEX2724302.1"
                     /translation="MKSSHTVSRWLAGSGIAAVIVLGSAAAQPAPDFQPQVGQAGKDV
                     IWVPTSQALVDKMLDMAKVTPSDFVMDLGSGDGRTVITAAKRGAKAVGIEYDPRMVEL
                     SQRNAAQEGVTDKATFMKADLFESDFSQATVITMFLLPEINLKLRDRILDLKPGTRIV
                     SNSFSMGDWAADETAEAVEGCTSYCKALFWVVPAKVEGTWSTPAGELVLEQKYQEVSG
                     TLKNGNVVAPVMDGKLSGDQITFTAGGTRYTGKVQGNAIEGTSGSSAWRATKK"
     gene            complement(2449..3939)
                     /locus_tag="VHN20_00625"
     CDS             complement(2449..3939)
                     /locus_tag="VHN20_00625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HEX2724303.1"
                     /translation="MGPFLDLMQGFGAALTPANLAMCFAGVLLGQMVGILPGIGPSAA
                     IALLLPLTYGSTPTAAIIMFAGIYYGAQYGGTLTSVLVSVPGESSTVMTSIDGYQMAV
                     QGRAGVALGIAAIGSFVAGTLGTLGLMFLAPPLARAALAFGPPEYFALVVLGLTALAA
                     VGSSIAKGLATGVAGLLFGTIGIDPQTGVSRFDFGQVWLLDGIEFIVLTVALFGVGEV
                     LESCTTGTVRPILRVKNVLPTRADLRATWKPILRGSGIGFVIGVLPATGATIASFVAY
                     IVEKKLARDPSRFGRGAIEGVAGPEASNNAAAAGAMVPMLSLGVPGSGTTAVILGALI
                     MFGLRPGPEMFDKNAQLVWAVIASMYVGNVILLVMNLPLAGLFAHMLRIPYRWLYPPI
                     LALCVAGVFSQSNSLEDCWLLIGFGALGWLMKRYDWPAAPMVLGLVLGPLFETSLRQS
                     LTLSHGSSLIFLTRPISGVLLAAALAAVLAPALVRLAGRSRALAGA"
     gene            complement(3942..4394)
                     /locus_tag="VHN20_00630"
     CDS             complement(3942..4394)
                     /locus_tag="VHN20_00630"
                     /inference="COORDINATES: protein motif:HMM:NF018979.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter TctB
                     family protein"
                     /protein_id="HEX2724304.1"
                     /translation="MRARVINGDVGLALVFAAIGAVWIFGALGLPFWQGFAPESGFLP
                     LFYGILLVGLSAAVLVMRLRDADAASVDQPVGKPLAVLAALTAAVVGVEPAGFGPSVF
                     LLLLFLFVVVERLPVLRSLVVAGATTATLILIFRTWLGVPLPAGPLGV"
     gene            complement(4404..>4825)
                     /locus_tag="VHN20_00635"
     CDS             complement(4404..>4825)
                     /locus_tag="VHN20_00635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018388852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEX2724305.1"
                     /translation="RNMISFNRGGEALTALLGGHVHAAVGNPLEFMGHLKSGAVRAIG
                     VFRDSRFAEMPDVPTMKEQGINAPNFQMWRGVAVPKGAPENAARYWEGVLQKVVASPQ
                     YKAYIRENVASEAPIPGQAFEKFLAEQDRLYRDLLGK"
BASE COUNT          780 a         1684 c         1691 g          670 t
ORIGIN      
        1 gcgtcaccgc caccgcgcgc gatctcggcg caggcgtcgt cgatcagctc gcgccgccgc
       61 gccgcaaggg cgaccttggc gccggcggcg gcgagcacac cggcgaaatg gcggccgagc
      121 ccgcccgacg cgcccgtcac cagcgccgac ctgccggaga gatcgacctt cagagccgat
      181 cggctgccgg gttcggcggg cgtcaagcac gccctccgtc gcgtcgcggc acgttggcgc
      241 gcgccagcac cacctcgaac aggacctggc agccggcctc ggcctcctcg ggcaggatgc
      301 tttccgcctc gttgtgcgag aggccgtcct tgcagggcgt gaagatcatc gcggccggca
      361 ggcagcgcgc cacgtgcacg gcatcgtggg ccgcgcccga aacgatgtcg cgcgccggca
      421 gcccgagctt cgccgccgcc tcgcgcacga gcgcgacgca ggccggatcg aattgctgcg
      481 ccggcaacgt gaagagcggc gtcagcgtca gcgtcacgct gcatgcgtcg gcgatgatct
      541 gcgcctcgtg cgtgaaggcc gcgttgagcc gctcgacctc gtggccgctc gggtggcgga
      601 actccaccga gaaacgcacc tcgccgggga tgacgttgcg gctgttgggc agcacggaca
      661 gctgcccgac ggtgccgcgc ccgtcctcgc cgcgcgcgcg catcaggcag tcgaccaggt
      721 cgatgatgcg tgccgcgcag acgagcgcgt ccttgcgcgt cgacggcggc gtcgtgccgg
      781 catgcgcgtc ctggccagtg acgaccgcgt cgtaccagat ctgcgcctgg gcgccggtca
      841 cgacgccgat catcttgcgc tcgcgctcga ggatcgggcc ctgctcgata tgcagctcga
      901 aataagcatc cgcagcaaac tgtgtcggcg cctccggccc gcggatgccg gtcgcgtcga
      961 gcgcctcgcc gacgctgacg ccgtcgatgt cggtgaacgc ctccgcctcg tccatcgcga
     1021 aggcgccgga ccacaccccc gaccccatca ggctgtggcc gaagcgcgag ccttcctcgt
     1081 cggtccagtt gacgagctcg atcggcgcct cggtgacgat gtcgaggtcg ttgagcgtgc
     1141 gcacgacctc gagcccggcg aggacgccga gcgcgccgtc gaacttgccg cccgacggct
     1201 ggctgtcgag atggctgccg aacagcaccg gcggtcgcgt cgggtcgcgg ccctcgcgcc
     1261 gcgcgaacat gttgccgatg gcgtcgacgc ggacgctgag gccggctgtc tcgcaccacg
     1321 tcctgaacag cgcgcgtccc tgccggtcga gatcgctcaa ggcgagccgg cgcacgccgc
     1381 ctttgggcgt ggcgccgatc gccgccatgt ccatgaggct gccccacagc cgcgcgccgt
     1441 ggatgcgccg gttggtcctc ggggtcatgg gcgccggccc gatgcagacg cgctatttct
     1501 tcgtggcgcg ccaggcgctc gagccgctcg tcccttcgat cgcgttgcct tgcaccttgc
     1561 cggtgtagcg cgtgccgccg gccgtgaacg tgatctggtc gccgctcagc ttgccgtcca
     1621 tgaccggggc gacgacgttg ccgttcttca gcgttcccga cacctcctgg tatttctgct
     1681 cgaggacaag ctcgccggcc ggtgtgctcc aggtcccttc caccttggcc ggaacgaccc
     1741 agaacagcgc cttgcaatag gaggtgcagc cttcgacggc ttccgcggtc tcgtccgccg
     1801 cccagtcgcc catgctgaaa ctgttggaga cgatgcgggt gcccggcttc aggtcgagga
     1861 tgcggtcacg caacttgaga ttgatctcgg ggagcaggaa catggtgatg acggtcgcct
     1921 gcgaaaaatc gctttcgaac aggtcggcct tcatgaaggt cgccttgtcg gtgacgcctt
     1981 cctgggcggc attgcgctgc gacagctcca ccatgcgcgg gtcgtattcg atgccgaccg
     2041 ccttggcgcc gcgcttggcg gcggtgatca ccgtgcgtcc gtcgccggaa ccgagatcca
     2101 tcacgaagtc gctgggggtg accttggcca tgtcgagcat cttgtcgacg agcgcctgcg
     2161 aggtcggcac ccagatcacg tccttccctg cctgcccgac ctgcggctgg aagtccggcg
     2221 ccggctgggc cgccgccgag ccgaggacga tgacggcggc gatgccggac ccggccagcc
     2281 accgggaaac agtgtgagac gacttcatgc gtatctcctg gatgacgccc cggcggggcc
     2341 ccctgatggg gcgaccttaa cgaggccgat gagggttgtc acagggggcg gaggcccact
     2401 gggcggctgg ttagatgcga cacggcatgg cggcaatcgg ccgggtcttc acgctcccgc
     2461 gagcgcccgg ctgcggccgg ccagccgcac cagggccggc gcgagcacgg ccgcgagcgc
     2521 cgccgcgagc agcacgccgg agatcgggcg cgtgaggaag atcaggctgc tgccgtgcga
     2581 gagggtgagc gactggcgca gggaggtctc gaagagcggg ccgagcacga gccccagcac
     2641 catcggagcg gccggccagt cgtagcgctt catgagccag ccgagcgcgc cgaagccgat
     2701 gagcagccag caatcctcca ggctgttgga ctgcgagaac accccggcga cgcacagcgc
     2761 caggatgggt ggatacagcc accggtaggg gatgcgcagc atgtgcgcga acagcccggc
     2821 gagcggcagg ttcatgacca ggaggatcac gttgccgaca tacatgctgg cgatcaccgc
     2881 ccagacgagc tgcgcgttct tgtcgaacat ctccggcccg ggccgcagcc cgaacatgat
     2941 cagggcgccg aggatcaccg ccgtggtgcc cgatccgggc acgccgagcg agagcatcgg
     3001 caccatggct ccggcggcgg cggcattgtt ggacgcctcc ggcccggcga cgccctcgat
     3061 agcgccacgc ccgaagcgcg acggatcgcg cgccagcttc ttctcgacga tgtaggcgac
     3121 gaacgaggcg atggtcgcgc ccgtcgccgg cagcacgccg atcacgaaac cgatgccgct
     3181 gccgcgcagg atcggcttcc aggtggcgcg caggtcggcg cgggtcggca gcacgttctt
     3241 cacgcggagg atgggccgca ccgtgccggt ggtgcagctt tcgagcacct caccgacgcc
     3301 aaacagcgcc accgtgagga cgatgaactc gatcccgtcg agcagccaga cctggccgaa
     3361 atcgaaccgg gacacgccgg tctgcgggtc gataccgatc gtgccgaaga ggaggccggc
     3421 gacgccggtc gcaagacctt tcgcgatcga cgagccgact gcggcgagcg ccgtcaggcc
     3481 gagcaccaca agcgcgaaat attcgggcgg tccgaaagcg agggcggcgc gcgccagcgg
     3541 cggcgccagg aacatgaggc cgagcgtgcc gagcgtgccg gcgacgaagg agccgatcgc
     3601 cgcgatgccg agggcgacgc cggcgcggcc ctggacggcc atctggtagc cgtcgatgct
     3661 cgtcatcacc gtgctcgact cgcccggcac gctgacgagg accgaggtga gcgtgccgcc
     3721 gtattgcgcg ccgtaataga tgcccgcgaa catgatgatc gccgccgtcg gcgtcgagcc
     3781 gtaggtcagc ggcagcagca gcgcgatcgc ggccgacggg ccgatgcccg gcaggatgcc
     3841 gaccatctgg ccgagcagca cgccggcgaa gcacatggcc aggttcgccg gcgtcagcgc
     3901 cgcgccgaaa ccctgcatca ggtcgaggaa cggccccatg gtcagacccc gagcgggccg
     3961 gccggcagcg gcacgccgag ccaggtcctg aagatcagga tcagcgttgc cgtggtcgcg
     4021 cctgcaacga cgagcgagcg cagcaccgga aggcgctcca ccaccacgaa caggaagagc
     4081 aggagcagga acacggaggg tccgaagccg gccggctcga cgccgaccac cgccgcggtg
     4141 agtgcggcga gcacggcgag cggctttccg accggctggt cgacggacgc ggcgtccgca
     4201 tcgcgcagac gcatcaccag caccgccgcc gaaaggccga ccagcaggat gccgtagaac
     4261 agcggcagga agccggattc cggcgcgaag ccctgccaga atggcaggcc gagcgcgccg
     4321 aagatccaca cggccccgat ggcagcgaag acaagcgcga gcccgacgtc gccgttgatc
     4381 acgcgcgccc gcatcgccgg cgcctacttg ccaaggagat cgcggtacag gcggtcctgc
     4441 tccgccagga atttttcgaa cgcctggccg gggatcggcg cctcggaagc gacattctcg
     4501 cggatatagg ccttgtattg cggcgaagcg acgaccttct gcagaacgcc ttcccagtag
     4561 cgcgccgcgt tctcgggcgc gcccttcggc accgccacgc cgcgccacat ctggaaattg
     4621 ggcgcgttga tgccctgctc cttcatggtc ggcacgtccg gcatctcggc gaaacggctg
     4681 tcgcggaaga cgccgatggc gcggacggcg ccgctcttga gatggcccat gaactcgagc
     4741 ggattgccga ccgcggcatg cacgtggccg ccgagcagcg ccgtgagcgc ctcgccgccg
     4801 cggttgaagc tgatcatgtt ccgct
//
LOCUS       DATAIQ010000042         1596 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_93885, whole genome shotgun sequence.
ACCESSION   DATAIQ010000042 DATAIQ010000000
VERSION     DATAIQ010000042.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1596)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1596)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1596
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_93885"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            94..492
                     /locus_tag="VHN20_00640"
     CDS             94..492
                     /locus_tag="VHN20_00640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006700451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low affinity iron permease family protein"
                     /protein_id="HEX2724306.1"
                     /translation="MHEFFRKFAHQTSYVAGSPWAFILAVAIILAWGISGPIFGFSDT
                     WQLVINTGTTIVTFLMVFLIQSAQNRDAAAIQAKLDELVRAIDHARNEFIGIEHLTED
                     ELDSIREEIEAEFGEKNVRAEALARLIRRR"
     gene            544..>1596
                     /locus_tag="VHN20_00645"
     CDS             544..>1596
                     /locus_tag="VHN20_00645"
                     /inference="COORDINATES: protein motif:HMM:NF012593.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:dicarboxylase symporter family
                     transporter"
                     /protein_id="HEX2724307.1"
                     /translation="MSETETKADMKRNPGWRILAALALGLAAGAAASGLGDGWRDPAV
                     RWAGAVGGVWLDALKVTVIPLIVALLVSGIVGGAKAAGSSRTAGRAILWFAVVLTLSA
                     LLGGLAMPLLLQWFPLPDSAAEALRAGLAGVDQAAASASVPTATDFLRSIVPANVFAA
                     AASDQILPLTLFAAAFAFAITRIEPARREQLAGFFQAVEQAMLVMVGWVLWVAPLGVF
                     ALAFALGAGAGATVFGAILHYVLLVSAIGLIVTIAGYGIAILAAGWRPGAFARAMIPP
                     QAVAISTQSSLASLPAMVGAARRLGVREADSDVVLPLAVALFRATGPAMNIAVAIYVA
                     YWLGLELTGWQIAAGVA"
BASE COUNT          206 a          546 c          557 g          287 t
ORIGIN      
        1 aggtcctctc gttcgcttgg tggttacctg ggtcgccaga ctgcgatggc gcgtcgccga
       61 gacggcatgg cgctgctggc agggagcgtc ctcatgcacg agttcttccg caagtttgcc
      121 caccagacat cttatgttgc cggctccccg tgggcgttca tcctggccgt cgcgatcatt
      181 ctcgcctggg gaatcagcgg gcccatcttt ggcttctccg acacctggca actggtgatc
      241 aataccggca cgacgatcgt caccttcctg atggtgttcc tcatccagag cgcccagaat
      301 cgcgacgccg cggcgatcca ggccaagctt gacgaactgg tccgggcgat cgaccacgcg
      361 cgcaacgaat tcatcggaat cgaacatctg acagaggacg agctcgattc gatccgcgag
      421 gagatcgagg cggaatttgg cgagaagaat gtccgcgccg aagcgctcgc gcggctgatc
      481 cggcggcgct gagcggcggt gagagcctag ccaccacttc gcacgaccgc taccgtcgcg
      541 cggatgagcg agaccgagac caaggctgac atgaagcgca acccgggttg gcggatcctc
      601 gccgcgctgg cgctcggcct ggcggccgga gcggcggcct cgggcctcgg cgatggctgg
      661 cgcgatccgg cggtgcgctg ggccggggcg gtcggcgggg tttggctcga cgcgctcaag
      721 gtcaccgtca tcccgctgat cgtggcgctg ctggtgagcg gcatcgtcgg cggcgccaag
      781 gccgcgggat cgagccgcac agccggccgc gcgatcctgt ggttcgcggt ggtgctgacc
      841 ctgtcggcgc tgctcggcgg cctggcgatg ccgctgctgc tgcaatggtt cccgctcccc
      901 gacagcgccg ccgaagcgct tcgcgccggg cttgccgggg tcgaccaggc ggcggccagc
      961 gcgtcggtgc cgacggcgac cgatttcctc cgctcgattg tcccggccaa cgtctttgca
     1021 gcagcggcca gcgaccagat cctgccgctg actttgttcg ccgccgcctt cgcctttgcc
     1081 atcactcgga tcgagccggc ccggcgcgag caactcgccg gtttcttcca ggcggtcgag
     1141 caggcgatgc tggtcatggt cgggtgggtg ctgtgggtcg cgccgctcgg cgtgttcgcg
     1201 ctggccttcg cgcttggcgc cggggccgga gcgacggtgt tcggcgcgat cctccattac
     1261 gtcctgctgg tctcggcgat cggcctgatt gtcaccatcg ccggctacgg aatcgcgatc
     1321 cttgccgccg gctggcgccc cggcgccttc gcccgggcga tgatcccgcc gcaggcggtc
     1381 gcgatatcga cccagtcgag tctcgcctcg ctgccggcga tggtcggagc ggcccgtcgg
     1441 ctcggcgttc gcgaggccga cagcgacgtc gttctgccgc ttgcggtggc actgttccgc
     1501 gccaccggcc cggcgatgaa tatcgcggtc gcgatctacg tcgcctactg gctcgggctc
     1561 gagctcaccg gctggcagat cgccgccggc gtggcg
//
LOCUS       DATAIQ010000043         1834 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_417378, whole genome shotgun sequence.
ACCESSION   DATAIQ010000043 DATAIQ010000000
VERSION     DATAIQ010000043.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1834)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1834)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1834
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_417378"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            135..>1834
                     /locus_tag="VHN20_00650"
     CDS             135..>1834
                     /locus_tag="VHN20_00650"
                     /inference="COORDINATES: protein motif:HMM:NF017775.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein/permease"
                     /protein_id="HEX2724308.1"
                     /translation="MDASNPVNPGDQPEEKQGPPPSYIARAFFRIALGFWKGATKRRA
                     WILLLGVLAFMLANVAAALGVNRWNKFFFDALEQKNVSSVMLGIGIILALAVASAAAS
                     VGLVHMRMRLQLRWRQWLTDHLVRRWLSERRFYQLNIVGGEGSNPEFRIADDVRLATE
                     PLVDFAHGLGNALLSAAAFIGVLWAVGGSISFEAFGATYNIPGYMVVAAVLYSALTSV
                     ATIMIGRPLIRRTEAKNTGEARLRYELTRVRESAENIALIGGDDDERERLRDTFNDLA
                     KRWVRVIIQQARMTWISYSNLVLAPAVPLLLGAPKYLAGELSLGELMQVATAFTQTQV
                     ALNWLVDNAIRLAEWFASAQRVTELTDAIDELEATIGRYGTSDTVVLGDSSDDALHIK
                     NLSLAQQNGRIMIADADTIIPRGEKVIVKGESGTGKSTLIRAMAGLWPWGTGEIRRPA
                     NAKIAFMPQRPYIPLGTLRHAVLYPEPEREVSDETIRDALKRCGLSHLVARLDEEDQW
                     EGILSGGEKQRLAFARLLVSTPDIVIMDESTSALDEESQARMMEFLRTDLADATVLSV
                     T"
BASE COUNT          326 a          612 c          607 g          289 t
ORIGIN      
        1 ggaacggagc tttttgcgct gcattaacgc tacagcatga ccggcgaggc acgacgcttc
       61 gtcgagaaga aacgcgccgc aaggcgagcg agagcgggcc ggcatcgtca ggcagcggtt
      121 ccgaggagca atcgatggac gcatccaacc ctgtgaatcc gggggatcag ccggaggaaa
      181 agcaggggcc accgccgagc tatatcgcgc gggccttttt ccgcatcgcg ctcggcttct
      241 ggaagggcgc gaccaagagg cgcgcctgga tcctgcttct cggcgtgctc gccttcatgc
      301 tggccaacgt ggccgcggca ctcggcgtca atcgctggaa caagttcttc ttcgacgccc
      361 tcgagcagaa gaacgtttcc tcggtcatgc tcggcatcgg catcatcctg gcgctcgcgg
      421 tggcgtcggc agccgcatcg gtcggcctcg tccacatgcg catgcgcctg cagctgcgat
      481 ggcggcaatg gctgaccgac catctcgtga ggcgatggct gtcggagcgt cgcttctacc
      541 agctcaatat cgtcgggggc gaaggcagca atcccgagtt ccgcatcgcc gacgacgtcc
      601 gcctcgcgac cgagcctctc gtcgatttcg cgcacggcct cggcaacgcg ctgctgtcgg
      661 cggcggcgtt catcggcgtt ctctgggcag tcggaggcag catcagcttc gaggcgttcg
      721 gggcgacgta caacatcccc ggctacatgg tcgtggcggc ggtcctctat tccgccctga
      781 cgtcggttgc gaccatcatg atcggccggc cgctgatccg gcgcaccgag gccaagaaca
      841 cgggcgaggc gcggctgcgc tacgagctca cgcgcgtgcg cgagagcgcc gagaacatcg
      901 cgttgatcgg cggcgacgat gacgagcgcg agcgcctcag ggacaccttc aacgacctcg
      961 ccaaacgctg ggtcagggtg atcatccagc aggcgcgcat gacctggatc agctattcca
     1021 acctggtgct cgcaccggcc gtgcccctgc tcctcggcgc gccgaaatac ctggcgggcg
     1081 agctcagcct gggcgagctg atgcaggtcg cgacggcctt cacgcaaacc caggtcgcgc
     1141 tcaactggct cgtggataat gccatccggc tcgccgaatg gttcgcgtcg gcgcagcgcg
     1201 tgaccgaact gaccgatgcc atcgacgagc tggaagccac gatcggccgc tacggcacga
     1261 gcgacacggt cgtgctcggc gacagcagcg acgatgccct gcacatcaaa aacctgtcgc
     1321 tcgcccagca gaacggccgc atcatgatcg cggacgccga caccatcatc ccgcgcgggg
     1381 agaaggtgat cgtcaagggc gagtcgggga ccggcaagag cacgctgatc cgcgccatgg
     1441 ccggcctgtg gccctggggc accggcgaaa tccggcgccc ggcaaacgcc aagatcgcct
     1501 tcatgccgca acggccgtac atcccgctcg gcaccctgcg gcatgccgtg ctctatcccg
     1561 agccggaacg ggaggtgtcc gacgagacga tccgcgatgc gctcaagcgc tgcggcctgt
     1621 cgcacctggt tgcgcgcctc gacgaggagg atcaatggga agggatcttg tccgggggcg
     1681 agaagcagcg gctcgccttc gcgcgcctgc tcgtcagcac gccggatatc gtgatcatgg
     1741 atgaatccac ctccgcgctc gacgaggaga gccaggcgcg catgatggag ttcctgcgca
     1801 cggacctggc cgacgccacg gtgctcagcg tgac
//
LOCUS       DATAIQ010000044         1506 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_417386, whole genome shotgun sequence.
ACCESSION   DATAIQ010000044 DATAIQ010000000
VERSION     DATAIQ010000044.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1506)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1506)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1506
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_417386"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..878)
                     /locus_tag="VHN20_00655"
     CDS             complement(<1..878)
                     /locus_tag="VHN20_00655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004129804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate/isopropylmalate family dehydrogenase"
                     /protein_id="HEX2724309.1"
                     /translation="MKANSFSIAVMPGEGIGAEVMAAALAVLEAAQARFGFACRTETI
                     PGGAHYYRETGRVLPEDGIDRAAQADAILFGAMGWPDIRFPDGTEIAPQLDIRFALKL
                     FAGVRPIRAIPGVPAVLANPRAKDIDFVIIRESTEGMFASRGKGEVIDDREARDTQVI
                     TRQTTEKLTHFSCELARQRKRERGTAGRVTLVDKANVFSSFAFMRKVFYEAAAAHPDV
                     EAAHHYVDAMALDLVRRPWDFDVLPMENLLGDILSDLGAGLVGGMGFAPSADVGLAHA
                     LFQPSHGTAPDIAGKGV"
     gene            988..>1506
                     /locus_tag="VHN20_00660"
     CDS             988..>1506
                     /locus_tag="VHN20_00660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012330062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX2724310.1"
                     /translation="MSDILLEVDGVTLQYKTPQQLVTATYRVSFQVREGDRFVMLGPS
                     GCGKSTMLKAVGGFMTPVEGSIAIRGRTVAGPGPDRMMVFQEFEQLMPWKTVLQNVLF
                     PMQATKKFPRAEAHERALAFIEKVKLTKFRNVYPHMLSGGMKMRVAIARAMALEPDVL
                     LMDEPFAALDALT"
BASE COUNT          240 a          508 c          509 g          249 t
ORIGIN      
        1 acgcccttgc cggcgatgtc cggcgcggtg ccgtggctcg gctggaacag cgcgtgcgcg
       61 aggccgacgt cggcggacgg cgcgaagccc atgccgccga cgagcccggc gccgaggtcc
      121 gacaggatgt cgccgagcag gttttccatc ggcagcacgt cgaagtccca gggacggcgc
      181 acgaggtcga gcgccatcgc gtcgacatag tgatgcgccg cctcgacgtc cggatgcgcg
      241 gcggcggcct cgtaaaaaac ctttcgcatg aaggcgaagg acgagaacac gttggccttg
      301 tcgacgagcg tgacgcggcc ggcggtgccg cgctcgcgct tcctctggcg ggccagctcg
      361 cacgagaaat gcgtgagctt ctcggtcgtc tgccgcgtga tcacctgcgt gtcgcgcgcc
      421 tcgcggtcgt cgatcacctc gcccttgccg cgcgaggcga acatgccctc cgtcgattcg
      481 cggatgatga cgaagtcgat gtcttttgcc cgcggattgg ccaggactgc ggggactccg
      541 ggaatggcgc ggatcgggcg cacgccggcg aacagtttta gcgcgaagcg gatgtcgagc
      601 tgcggcgcga tctcggtgcc gtcggggaag cggatgtcgg gccagcccat ggcgccgaac
      661 aggatggcgt cggcttgggc cgcgcggtcg atgccgtcct cgggcagcac gcgcccggtc
      721 tcccggtagt aatgcgcgcc gcccgggatc gtctccgtgc ggcaggcgaa gccgaagcgc
      781 gcctgtgccg cctcgagcac cgccagggcg gccgccatga cctcggcgcc gatgccctcg
      841 ccgggcatca ccgcgatcga gaaggaattc gccttcattg cccccaacct tcgtcgttcc
      901 tgccaaaaat ccgcttgctt cgcccggccc gaccctgatt tgctcaaaac caatcgattg
      961 tgccgaggcg tcatcgcagc cgtgaccatg tccgacatcc tgctcgaagt cgatggcgtc
     1021 accttgcaat acaagacgcc gcagcagctc gtcaccgcca cctaccgcgt gagctttcag
     1081 gtccgtgagg gcgaccgctt cgtgatgctg gggccgtcgg gctgcggcaa gtccaccatg
     1141 ctgaaggccg tcggcggctt catgacgccc gtcgaaggtt cgatcgccat ccgcgggcgg
     1201 accgtggcag gcccgggccc ggaccgcatg atggtgttcc aggaattcga gcagctgatg
     1261 ccgtggaaga cggtgctgca gaacgtcctc ttcccgatgc aggcgacgaa gaaatttccg
     1321 cgcgccgagg cgcacgagcg tgcgctcgcc ttcatcgaga aggtcaagct gacgaagttc
     1381 cgcaacgtct atccgcatat gctgtcgggc ggcatgaaga tgcgcgtcgc catcgcccgc
     1441 gccatggcgc tcgagcccga cgtcctcttg atggacgagc cgttcgcggc gctcgacgcg
     1501 ctcacc
//
LOCUS       DATAIQ010000045         1565 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_279120, whole genome shotgun sequence.
ACCESSION   DATAIQ010000045 DATAIQ010000000
VERSION     DATAIQ010000045.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1565)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1565)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1565
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_279120"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..508)
                     /locus_tag="VHN20_00665"
     CDS             complement(<1..508)
                     /locus_tag="VHN20_00665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7TM-DISM domain-containing protein"
                     /protein_id="HEX2724311.1"
                     /translation="MVHAAITVLVAALALVVHSSSAQAVEAARVTLDAAAIDLTSAIE
                     RCTSDGDLIQISTAPGRDGIVRRIAVKARESGTRSDWIVFALTNDTDEQVDRLLVAPH
                     FRLVGSGVIWPDLGASRIAAITASEGIRPEREQSPDADVFLITLDPGTTVTYVAELRT
                     PNVPQVYLW"
     gene            complement(791..>1565)
                     /locus_tag="VHN20_00670"
     CDS             complement(791..>1565)
                     /locus_tag="VHN20_00670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010687050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HEX2724312.1"
                     /translation="TIKSFGPEAIRAFIGREYAPGRMVLAAAGAVEHEAIVAAAEKTL
                     GALPAAQTGATASARYTGGERRLARKLEQANLIIGLPGCSFKDPHFYATHMFAQVLGG
                     GLTSRLWHEVRERRGLAYQVDAFHWPFSDCGVFGIGAGTAGADLPELVDVAIDCARQA
                     TLDLDDGEIARAKAQLKVALLAALETPGGRIERNARQLLAWGRVIPVEEIVERVDAVT
                     AENVRQAGADLLSGAPTVAAIGPIKRLPPIDRIAAALQG"
BASE COUNT          246 a          507 c          578 g          234 t
ORIGIN      
        1 cccacaggta cacctgcggc acgttgggcg tgcgcagctc ggcgacgtag gtcaccgtcg
       61 tgcccgggtc gagcgtgatc aggaagacgt cggcgtccgg gctttgctcc cgttcaggcc
      121 ggatgccttc gctggccgtg atggcggcaa tgcgcgacgc cccaaggtcg ggccagatta
      181 cgccggagcc gaccaggcgg aagtggggag cgacgagcag gcggtcgacc tgctcgtcgg
      241 tgtcgttggt gagcgcgaag acgatccagt ccgagcgggt gccggattcg cgcgccttga
      301 cggcgatgcg gcgcacgatg ccgtcccgcc cgggagcggt cgagatctgg ataaggtcgc
      361 cgtcggaggt gcagcgctcg atcgccgacg tcaggtcgat ggcggccgcg tcgagggtca
      421 cgcgggcggc ttcgactgcc tgggctgacg atgaatggac gactagcgcg agcgccgcga
      481 cgagcaccgt tatggcagca tggacgatcc gcaacgcgtg ttctctcgtc cggaactcac
      541 aggtgggtgg tgagccaagt cgtatcgacc ggcaagcgtg acggcaaggc gctggaagct
      601 agcagcatgg ctcttgaaca gcaaagatgg gccggaatgc ggccaagttg agcatttccg
      661 gtcgggggcg gcggcgggcg gtgtcttttc cgccaaatca tgcgtcaaaa gcaagtcgag
      721 cgccgaaggt cggccggcgt cggcacgacc gacatgccgc ctcctcccca agggattccg
      781 gccgcaaggc tcagccctgc agggcggcgg cgatccggtc gatggggggc agacgcttga
      841 tcggcccgat ggccgccacg gtcggggcgc cggacagcag gtccgcgccc gcttgccgga
      901 cattctcggc tgtcacggcg tcgacccgct ccacgatctc ctcgacaggg atgacccgcc
      961 cccaggcgag aagctggcgc gcattgcgct cgatccgccc gcccggggtt tcaagggccg
     1021 cgaggagggc aaccttgagc tgggccttgg cgcgggcgat ctcgccgtcg tcgaggtcaa
     1081 gggtggcctg gcgggcgcaa tcgatggcga cgtcgaccag ctcgggcagg tcggcgccgg
     1141 cggtgcccgc gccgatcccg aacacgccgc aatcggaaaa cggccagtgg aacgcgtcca
     1201 cctggtaggc gaggccgcgc ctttcgcgca cttcgtgcca tagccgcgac gtcaggccgc
     1261 cgcccaggac ctgggcgaac atatgcgtgg cgtagaagtg cggatccttg aaggagcagc
     1321 cgggcagccc gatgatcaga ttggcctgct cgagcttgcg ggccaggcgg cgttcgccgc
     1381 cggtatagcg cgccgaggcg gtcgccccgg tctgcgcagc gggcaacgcg cccaacgttt
     1441 tttcggccgc tgccacgatc gcctcgtgct ccacggcgcc ggcggcggcg agcaccatgc
     1501 gaccgggggc gtattcgcgg ccgatgaagg cccggatcgc ctccgggccg aagctcttga
     1561 tcgtc
//
LOCUS       DATAIQ010000046         3842 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_47120, whole genome shotgun sequence.
ACCESSION   DATAIQ010000046 DATAIQ010000000
VERSION     DATAIQ010000046.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3842)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3842)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3842
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_47120"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1916
                     /gene="mdoH"
                     /locus_tag="VHN20_00675"
     CDS             <1..1916
                     /gene="mdoH"
                     /locus_tag="VHN20_00675"
                     /EC_number="2.4.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016758 - hexosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glucans biosynthesis glucosyltransferase MdoH"
                     /protein_id="HEX2724313.1"
                     /translation="LALFTINFSWIALAFTSALVGFVVLLARPPALPARPQSLKARTA
                     IVMPVYNEATARTFAGIEAIRESVEATGLGGAFDYFILSDSTSPDAWIAEERAFLALR
                     ERLGPDARLYYRHRPKNHHRKAGNIADFVTRWGGAYAHMIVLDADSLMSGDCIVRLTA
                     AMEADPDAGIIQTLPLIINRNTLFARAQQFAARIYGPVIATGLATWSGRDGNYWGHNA
                     IIRTRAFAAHCGMPDLSGKPPLGGHIMSHDFVEAALMRRAGWTVYMLPNLSGSYEESP
                     PSLIDVAARDRRWCQGNLQHMRVIGARGLKLATRQHFATGIMSYLASPFWLFQLIVGI
                     ALVLQTTYIRPEYFTREFTLFPVWPRFDPERALALFGLTMAILLAPKFFGLLLTIFDA
                     NTRRACGGAVRLVLSSLIEIVLSALMAPMQMLVQSGSVFQILLGRDTGWQPQRRDDGS
                     IPLRDIVRRHRWHTLLGFFVGISAFTIATSLLLWMSPTIVGLMLAIPLSWLSGDLAAG
                     LALKRFGLLVTPDERHPPEVARRANTLQAENARSGFDDEDSFAALFRDPALREHHESM
                     LPHLPHRGRGEFASERVLAEAKIIDADTIDEAMRWLAPRERMVVLHDRALLHLAMRLR
                     PKPTLVSDSQGNG"
     gene            2013..>3842
                     /locus_tag="VHN20_00680"
     CDS             2013..>3842
                     /locus_tag="VHN20_00680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018645767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEX2724314.1"
                     /translation="MTTQIPPGDLALMKFGIGQPVPRKEDPKLVRGEGRYTDDINLPS
                     QAYAVMVRSPYAHGLIRSIDVAAARDMPGVLGVYTGQDLDAAGYGPLKVIPAFKNRDG
                     SPMLKPPRTALATDRVRFVGDPIAFVVAETAVQARDAAEAVNLDIEVLAAATDPREAA
                     RPDAPQLYDDVPANTFLDFHQGDAEAAAAAFAGAAHVIRLELSDNRVVVNAMEPRSAI
                     GAYHAAAGRWTLHVGSQGVFSLRNNMAEILGTDPRNMRVITDNVGGSFGMKAAPYPEY
                     VCLLHAAREIGRPVKWTDQRSESFLSDHHGRAIEVTAELALDRDGRFLAVRIDGYADL
                     GAFIVQMSPLPSTLNVAKNLVSVYRTPVIDVSIRCVFTNTTPVGPYRGAGRPEGNYFM
                     ERLIDAAAAQTGFDPVDLRRRNHIQPGDLPYATPAETTYDSGDFTTILERAVDAADWS
                     GFAARKAESKARGKLRGRGIGQYLEVTAPPTNEMGGIRFEADGTVTIITGTLDYGQGH
                     ATPFAQVLSTSLGVPFERIRIVQGDSDQLIAGGGTGGSKSIMASGAAIVEASEKVIEQ
                     GRQIAAHVLEAGAPDIEFANGRFMIAGTDRSVGIMDLAAQIHAG"
BASE COUNT          594 a         1381 c         1252 g          615 t
ORIGIN      
        1 tgctggccct cttcacgatc aacttctcgt ggatcgcgct tgccttcacg agcgccctcg
       61 tcggcttcgt cgtcctcctg gcgcggcccc ctgccctgcc ggcgcggccg caaagcctca
      121 aggcgcgcac cgcgatcgtg atgcccgtct acaacgaggc gacggcgcgg actttcgccg
      181 gcatcgaggc gatccgcgag tcggtcgagg cgaccggcct cggcggcgcg ttcgactatt
      241 tcatcctgtc ggattccacg agcccggacg cctggatcgc cgaggagcgc gccttcctcg
      301 ccctgcgcga gcggctcggg cctgacgcgc gcctctatta ccggcaccgg ccgaagaacc
      361 atcatcgcaa ggccggcaac atcgccgatt tcgtgacccg ctggggcggc gcctacgcgc
      421 acatgatcgt gctcgacgcc gacagcctga tgtccggcga ttgcatcgtg cgcctgacgg
      481 ccgcgatgga agcggacccg gatgccggca ttatccagac gctgccgctg atcatcaacc
      541 gcaacaccct gttcgcgcgg gcgcagcaat tcgccgcccg catctacggc ccggtcatcg
      601 ccaccggtct cgccacctgg tcgggacggg acggcaatta ctggggccac aacgccatca
      661 tccgcacgcg cgccttcgcg gcgcattgcg gcatgcccga cctgagcggc aagccgccgc
      721 tcggcgggca catcatgagc cacgacttcg tcgaggcggc cctgatgcgc cgggccggct
      781 ggaccgtcta catgctgccg aacctgtccg gcagctatga ggaaagcccg ccgtcgctga
      841 tcgacgtggc ggcgcgcgac cggcgctggt gccagggcaa cctgcagcac atgcgcgtga
      901 tcggcgcgcg cgggctcaag ctcgcgacgc gccagcattt tgcgaccggg atcatgtcgt
      961 atctggcgtc gcccttctgg ctattccagc tgatcgtcgg tatcgcgctc gtcctgcaga
     1021 ccacctacat ccggcccgaa tatttcacgc gcgagttcac gctgttcccg gtctggccgc
     1081 gcttcgaccc ggaacgcgcg ctggcgctgt tcggtctcac catggcgatc ctgctcgcgc
     1141 cgaaattctt cggcctgctt ctgacgatct tcgacgccaa cacgcgccgg gcttgcggcg
     1201 gcgccgtccg cctcgtgctc tcctcgctga tcgagatcgt cctgtcggcg ctcatggccc
     1261 cgatgcagat gctggtccag tccggctcgg tgtttcagat cctgctcggc cgcgacaccg
     1321 gctggcagcc gcagcgccgg gacgacggct ccattccgct gcgcgacatc gttcggcggc
     1381 accgctggca tacgctgctg ggattcttcg ttggcatatc ggctttcacg atcgccacgt
     1441 cgctgctctt gtggatgtcg ccgaccatcg tcggcctcat gctggccatt ccgctgtcgt
     1501 ggctcagcgg cgacctcgcc gccgggctgg cgctcaagcg gttcggcctg ctggtgaccc
     1561 cggacgaacg tcatcccccc gaggtcgccc ggcgcgccaa caccctgcag gcggagaatg
     1621 ccaggtcagg tttcgacgac gaggacagct tcgccgccct gttccgcgac ccggccttgc
     1681 gcgagcatca cgaaagcatg ctgccgcacc tgccgcatcg cggccgcggt gagttcgcgt
     1741 ccgaacgggt gctggccgag gccaagatca tcgacgccga caccatcgac gaggcgatgc
     1801 gctggctggc gcccagagag cgcatggtgg tcctgcacga ccgggccttg ctccatctgg
     1861 cgatgcggct aagaccgaag ccgaccctcg tctcggactc gcagggcaac ggatagcccg
     1921 ctgtgcgcgt tgtccgggcg ggggatccaa tcccatggcg cgggcatgaa cccgcggcca
     1981 gttcctttcc tctcttcggt tcggacagcc tgatgacgac gcagatcccg cccggcgacc
     2041 tcgcgctgat gaaattcggc atcggccagc cggtgccgcg caaggaagac cccaagctcg
     2101 tgcgcggcga aggccgctac acggacgaca tcaacctgcc gtcgcaggcc tatgcggtga
     2161 tggtgcgcag cccctatgcg cacggcctga tccgcagcat cgacgtcgca gcggcgcgcg
     2221 acatgcccgg cgtgctcggc gtttacaccg ggcaggatct cgacgcggcg ggctacggcc
     2281 cgctcaaggt gatcccggca ttcaagaacc gggacggctc gccgatgctc aagccgccgc
     2341 gcaccgcgct ggccaccgac cgcgtgcgct tcgtcggcga tccgatcgcc ttcgtggtgg
     2401 cggaaaccgc cgtgcaggcc cgcgacgccg ccgaagcggt caacctcgat atcgaggtgc
     2461 tcgcggccgc gaccgacccg agagaggcgg cgcggccgga tgcgccgcag ctttacgacg
     2521 acgtgccggc caataccttt ctcgatttcc accagggcga tgccgaagcc gccgccgcgg
     2581 ccttcgccgg tgccgcgcat gtgatccgtc tcgagctgag cgacaaccgc gtcgtcgtca
     2641 acgcgatgga gccgcgctcg gccatcggcg cctaccacgc cgccgccgga cggtggacgc
     2701 tgcatgtcgg ctcgcaaggc gtgttcagcc tgcgcaacaa catggccgag atcctcggga
     2761 ccgacccgcg gaacatgcgc gtgatcaccg acaatgtcgg cggctcgttc ggcatgaagg
     2821 cggcgccgta tccggaatat gtctgcctgc tgcacgccgc ccgggagatc gggcgaccgg
     2881 tgaaatggac cgatcagcgc tccgaaagct ttctgtccga tcatcatggc cgcgccatcg
     2941 aggtgacggc cgagctggcg ctcgatcgcg acgggcgctt cctcgcggtg cggatcgacg
     3001 gctatgccga tctcggcgcg ttcatcgtgc agatgtcgcc gctgccctcg accctcaacg
     3061 tcgccaagaa cctggtgagc gtctaccgca cgccggtgat cgacgtgtcg atccgctgcg
     3121 tgttcacgaa cacgacgccg gtcggaccgt atcgcggcgc cggccgtccc gagggcaact
     3181 atttcatgga gcggctgatc gatgccgcag ccgcgcagac cggcttcgac ccggtggacc
     3241 tgcgccggcg caaccatatc cagcccggcg acctgcccta cgccacgccg gccgagacga
     3301 cctatgacag cggcgacttc accacgattc tcgagcgcgc cgtcgacgcg gccgactggt
     3361 ccggcttcgc ggcgcgcaag gccgagagca aggcgcgcgg caagctgaga ggccgcggca
     3421 tcggccagta tctcgaggtc acggccccgc cgaccaacga gatgggcggc atccgcttcg
     3481 aggccgacgg cacggtcacg atcatcacgg gcacgctcga ttacggccag gggcacgcga
     3541 cgccgttcgc ccaggtgctg agcaccagcc tcggtgtccc gttcgagcgc atccgcatcg
     3601 tgcagggcga cagcgaccag ctcatcgccg gcggcggcac cggcggctcg aaatcgatca
     3661 tggcgagcgg cgccgcgatc gtcgaggcga gcgaaaaagt catcgagcag gggcgccaga
     3721 tcgcggcgca cgtgctcgag gcgggtgcgc cggacatcga gttcgcgaac ggccgtttca
     3781 tgatcgccgg caccgatcgc agcgtcggga tcatggatct ggcggcgcag atccacgccg
     3841 gc
//
LOCUS       DATAIQ010000047         5607 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_139441, whole genome shotgun sequence.
ACCESSION   DATAIQ010000047 DATAIQ010000000
VERSION     DATAIQ010000047.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 5607)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5607)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5607
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_139441"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            191..1183
                     /locus_tag="VHN20_00685"
     CDS             191..1183
                     /locus_tag="VHN20_00685"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018391235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEX2724315.1"
                     /translation="MTGSLADTPRPKPRATVQSMPLAAPQPHYQPQPQYQPQRMSPAH
                     QLPAPIARTAALPAPRQPVAASGPGGWSAHGGTAVIVGPGENLNMIANRYGVPASAIL
                     SANRLASAAQVTAGRQIIIPVYNAEGTPAAAAPLRQAMPAEPAKPPLHGGRVTAQPRP
                     AGPQTLAWNEPPPARQPAIAARPAAPAQAAPPRKEPESTSSLPPSDGTGEFRWPAHGR
                     VISGFGGASANEGINIAVPEGTPVKAAESGTVAYAGSEVKGYGNLVLVRHESGYVSAY
                     AHNSEITVKRGDKVRRGQVIAKSGQTGNVTSPQLHFEIRKGSTPIDPIPFLSRG"
     gene            complement(1244..2158)
                     /locus_tag="VHN20_00690"
     CDS             complement(1244..2158)
                     /locus_tag="VHN20_00690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX2724316.1"
                     /translation="MARDDNVLRLPGVSADEAPALLARIAEALDRIAPAPPAAPDLTA
                     ADAFVWHAATRRLAPVPKVNRVEMALLRGIDRVRDMLVENTERFARGLPANNALLWGA
                     RGMGKSSLVKAVHAEINRTLAAARGARPLKLIEIHREDIETLPELMGLLRPDPHRFIV
                     FCDDLSFDANDTTYKSLKAVLEGGIEGRPDNVIFYATSNRRHLLPREMLENERSTAIN
                     PGEAVEEKVSLSDRFGLWLGFHKCSQDEFLDMVYGYADHFGLGHDRDAIRAEALEWAT
                     TRGSRSGRTAWQYIQDLAGRLGKTLSGQ"
     gene            2351..2677
                     /gene="yajC"
                     /locus_tag="VHN20_00695"
     CDS             2351..2677
                     /gene="yajC"
                     /locus_tag="VHN20_00695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017483888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HEX2724317.1"
                     /translation="MISPAFAQGAPAAGGSDMILQFVPFILIFVIMWFLIIRPQQRRV
                     KAHQEMIKNVRRGDTVVTSGGIVGKVTKVTDDPEIEVEIADGVKVKLMRGMISEVRTR
                     GEPVKA"
     gene            2716..4308
                     /gene="secD"
                     /locus_tag="VHN20_00700"
     CDS             2716..4308
                     /gene="secD"
                     /locus_tag="VHN20_00700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015824328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HEX2724318.1"
                     /translation="MLRFSTTKIVVTIGVVLLGLLLAVPSLMTREQRDALKSHLPAWF
                     PLHAIVLGLDLQGGSHVLLEVDAPDLIRTQAIQLRDDVRRILRETGVALEGGIQMLPR
                     GIQLRVADPASRARVMPRLRELAQPIGNAILGQTGARTIDVVENPDGLIQLTFTEQGM
                     SDRIRRAIDQAIEVLRRRVDALGTTEPNIQRQGADRVLVQVPGLQDPQRLKEILGKTA
                     KLEFRLLAQTGAGDVDQLPSRDSGGQRVPVERRVIVEGGDLTDAQPGFDSRTNEPIVN
                     FRFNLRGAQRFGQATTENVGRPLAIVLDNEVISAPRILQPITGGSGQISGRFTVQQAN
                     DLAVLLRAGALPAKLTIVEERTVGPGLGRDSIEAGKIATYVATAFVVAFMFMTYGLFG
                     LFANIALLVHVGLIFGLMSALQATLTLPGIAGIVLTIGTAVDSNVLIYERIREEVHAG
                     RSIVSAIQAGFERAFATIIDSNSTMAIAAVILFFLGSGPVRGFAVVFILGILTTVITA
                     VTMTRMMIAVWYHWARPKTLPF"
     gene            4318..5262
                     /gene="secF"
                     /locus_tag="VHN20_00705"
     CDS             4318..5262
                     /gene="secF"
                     /locus_tag="VHN20_00705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012319245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HEX2724319.1"
                     /translation="MRLLRIWPDHSDFGFMRFRRVSFPFSAFLSVLTAVLFLTHGLNF
                     GIDFKGGTLVELQARSGRADVAKVRQTANSFGFGEVEVQEFGEAGGVSLRFTLQPGGE
                     AGQSAVVQKARATFENEFEFRRVETVGPRVSGELVQSGTIGVVLSVLAVLLYLWFRFE
                     RELAIGAIIGTLHDIVLTVGFFVITRLEFNMTSIAAILTIVGYSLNETVVVFDRTREL
                     LRRYKAMPTEQLLDLSINSTMSRTVMTATTAFLSLLALVLFGGKAIEDFALVMLFGVV
                     ICTYSAIFISSPVLIYIGVLGRGVDVPAKGTTVAQPAE"
     gene            5268..>5607
                     /locus_tag="VHN20_00710"
     CDS             5268..>5607
                     /locus_tag="VHN20_00710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MTH938/NDUFAF3 family protein"
                     /protein_id="HEX2724320.1"
                     /translation="MAIGRTYDGFVPGRYPIDAYGAGGFRFADMSHRGSILALPSGIK
                     AWAPTSGRALTAEDFAPALDESGAIELLLVGTGSDVVPLLEQVRWYLRDAGIRHDVMQ
                     TGAAARTYNIL"
BASE COUNT          848 a         1957 c         1861 g          941 t
ORIGIN      
        1 caagcaagtt tgcgtaagcg taggtgtgcc catgcgtatg agtgtcggac aaatacgtgc
       61 gctgtcgcgt gtcgttgtca ttggcctggt cagtggcgcg gcaagcgggt gcagttcgga
      121 ctccatacgg ttctcgggca atccgttctc caatcccttt gcctcgtcgc cgccgacgca
      181 cgagccgtcc atgacgggca gccttgccga cacgccgcgt ccgaagccgc gcgccacggt
      241 gcagtcgatg ccgctggccg ctccgcagcc gcactaccag ccgcagccgc aataccagcc
      301 gcagcgcatg agccctgccc atcagctgcc ggcgccgatc gccaggacag cggcgttgcc
      361 ggcgccgcgg caacccgttg cggcctcggg gccgggcggg tggtcggcgc atggcggcac
      421 ggccgtgatc gtcggccctg gcgagaacct caacatgatc gccaaccgct atggcgtgcc
      481 ggcttccgcc attctctcgg ccaaccggct cgccagcgcc gcgcaggtca cggccgggcg
      541 gcagatcatc atcccggtct acaatgccga aggcaccccg gccgccgcgg ctccgctacg
      601 ccaggccatg cccgccgagc ctgcgaagcc gccgcttcac ggcggccgcg tcacggcgca
      661 gccgcggccg gccgggcctc agaccctggc ctggaacgag ccgccgccgg ccaggcagcc
      721 ggccatcgcc gcccgcccgg cggcgccggc gcaggccgcc ccgccgcgca aggaacccga
      781 gtcgacgtcg agcctgccgc cgtccgacgg caccggcgag ttccgctggc cggcgcatgg
      841 acgcgtcatc tccggcttcg gcggcgccag cgccaacgaa ggcatcaaca tcgccgtgcc
      901 ggaaggcacg ccggtcaagg ccgccgagag cggcaccgtc gcctatgccg gcagcgaggt
      961 gaagggctac ggcaacctgg tgctcgtgcg ccacgagagc ggctacgtgt cggcctacgc
     1021 ccacaacagc gagatcacgg tcaagcgcgg cgacaaggtc aggcgcgggc aggtgatcgc
     1081 caagtccggc cagaccggca atgtgacctc gccgcagctg catttcgaga tccgcaaggg
     1141 ctcgacgccg atcgacccga tccccttcct cagccggggg taagaagcga ccggcaagtg
     1201 gcgaatggcg aatggaagac ccaaagccgc cattcgccat tcgctattga cctgaaagcg
     1261 tcttgccgag ccggcctgcc aggtcctgga tgtattgcca ggccgttcgt cccgaacgtg
     1321 agccgcgcgt cgtcgcccat tcgagcgcct cggcccggat ggcgtcgcgg tcgtggccga
     1381 gcccgaaatg atcggcatag ccgtagacca tgtcgaggaa ttcgtcctgg ctgcacttgt
     1441 ggaacccgag ccacagcccg aaccggtccg acagggacac cttctcctcg acggcttcgc
     1501 ccgggttgat ggccgtggag cgctcgttct ccagcatctc gcggggcagc aggtggcggc
     1561 ggttggaggt ggcgtagaag atcacgttgt cgggccggcc ctcgatgccg ccctcgagca
     1621 ccgccttcag cgacttgtag gtggtgtcgt tggcgtcgaa ggacaggtcg tcgcagaaca
     1681 cgatgaaacg atgcgggtca ggccgcagca gacccatcag ctccggcagc gtctcgatat
     1741 cctcgcggtg gatttcgatg agctttaagg gccgtgcccc acgggcggcc gccagcgtcc
     1801 ggttgatctc ggcatgcacc gccttgacca gcgacgactt gcccatgccc cgggcgcccc
     1861 agagcagggc attgttggcc ggcagcccgc gcgcgaagcg ttccgtgttc tcgaccagca
     1921 tgtcgcgcac gcggtcgatg ccgcgtaaga gcgccatctc gacgcggttg accttcggca
     1981 cgggggcgag gcgtcgcgtt gccgcatgcc agacgaaggc gtcggcggcg gtcaggtctg
     2041 gcgccgccgg cggggcgggg gcgatgcggt cgagcgcctc ggcgatgcgg gcgaggaggg
     2101 cgggcgcctc gtcggcgctc acgccgggga ggcgaaggac attgtcgtcg cgagccatgg
     2161 tcaggtgact ttcaccacgg tgaggctttc acaaagaggc gctgtgctta gcccgaatgg
     2221 ccggcagggt ccatcatgcg gcggcggcgc gaattgattt cacggggtgc atcgctatag
     2281 tccgcgccgc tttcgaaatc ccgcgcggtc cggggccgga ccggcgcgcc ttttgccatg
     2341 gagcacaagc ttgatctccc ccgctttcgc ccaaggggcc cccgctgctg gcggcagcga
     2401 catgatcctt cagttcgttc cgttcatcct gatcttcgtg atcatgtggt tcctgatcat
     2461 ccggccccag cagcgccggg ttaaggcgca tcaggagatg atcaagaacg tgcgccgggg
     2521 cgacaccgtc gtcacctcgg gcggcatcgt cggcaaggtc acgaaggtca cggacgatcc
     2581 ggagatcgag gtcgagatcg ccgacggggt caaggtcaag ctcatgcgcg gcatgatctc
     2641 cgaggtccgc acgcgcggcg agcccgtcaa ggcgtgatcg cacggccctc ggccaagatg
     2701 cggtaaggtt gaattatgct acgtttctcc acgacgaaga tcgtcgtcac catcggcgtc
     2761 gtgctcctcg ggctcctgct cgccgtcccc agcctgatga cgcgcgagca gcgcgacgcc
     2821 ctgaagagcc atctgccagc ctggttcccc ctgcacgcga tcgtccttgg tctcgacctg
     2881 cagggcggct cgcacgtcct gctcgaggtc gacgcgccgg atctgatccg cacgcaggcc
     2941 atccagctgc gcgacgacgt gcggcgcatc ctgcgcgaga ccggtgtcgc gctcgaaggc
     3001 ggcatccaga tgctgccgcg cggcatccag ctgcgcgtcg ccgatccggc cagccgggcc
     3061 agggtcatgc ccaggctgcg cgagctggcg cagccgatcg gcaacgcgat cctcggccag
     3121 accggagcac gcaccatcga tgtcgtcgaa aatcccgacg gcctgatcca gctcaccttc
     3181 accgaacagg gcatgagcga caggatccgc cgcgccatcg atcaggcgat cgaggtgctg
     3241 cgccggcgtg tcgatgccct cggcacgacg gagccgaaca tccagcggca gggcgccgac
     3301 cgcgtgctcg tgcaggtgcc cggccttcag gatccgcagc gcctgaagga gatcctcggc
     3361 aagaccgcca agctcgagtt ccggctgctc gcccagaccg gcgcgggcga cgtcgaccag
     3421 ctgccctcgc gcgattccgg ggggcagcgc gttccggtcg agcggcgcgt gatcgtcgaa
     3481 ggcggcgatc tgaccgacgc ccagcccggc ttcgactcgc gcaccaacga gccgatcgtc
     3541 aatttccgct tcaacctgcg cggcgcgcag cgcttcggcc aggccaccac ggaaaatgtc
     3601 ggccgccccc tggcgatcgt cctcgacaac gaggtgatct cggcgccgcg catcctgcag
     3661 ccgatcaccg gcggctcggg ccagatctcc ggccgcttca ccgtgcagca ggccaacgac
     3721 ctcgcggtcc ttctgcgcgc cggcgcgctg cccgccaagc tgacaatcgt cgaggagcgc
     3781 accgtcggtc ctggcctcgg gcgcgattcc atcgaggccg gcaagatcgc cacctacgtg
     3841 gcgacggcct tcgtcgtcgc gttcatgttc atgacctatg ggctgttcgg gctgttcgcc
     3901 aacatcgcgc tgctcgtcca tgtcggcctc atcttcggcc tcatgtcggc cttgcaggcg
     3961 acgctcaccc tgccgggcat cgccggcatc gtgctgacca tcggcacggc cgtcgattcc
     4021 aacgtgctga tctatgagcg catccgcgag gaggtccatg ccgggcgctc gatcgtctcg
     4081 gcgatccagg cgggcttcga gcgcgccttc gccacgatca tcgactccaa cagcaccatg
     4141 gcgatcgcag ccgtgatcct gttcttcctg gggtccggac cggtccgcgg tttcgcggtc
     4201 gtgttcattc tcggcattct gacgacggtg atcacagccg tcaccatgac ccgcatgatg
     4261 atcgcggtct ggtaccattg ggcgcgtccg aagacgctgc cgttctagga gctttacgtg
     4321 cgcctgcttc gtatctggcc cgaccacagc gatttcggct tcatgcgctt ccggcgcgtg
     4381 agctttccgt tctcggcctt cctgtcggtg ctcacggccg tcctgttcct cacgcacggc
     4441 ctcaatttcg gcatcgattt caagggcggc acgctggtcg agctgcaggc gcgctccggc
     4501 cgcgccgacg tcgccaaggt gcggcagacc gccaactcct tcggcttcgg cgaggtcgag
     4561 gtgcaggaat tcggcgaggc cggcggcgtg tcgctgcgct tcaccctgca gcccggcggc
     4621 gaagccggcc agtccgccgt ggtgcagaag gcgcgcgcca cgttcgagaa cgagttcgag
     4681 ttcaggcgcg tcgagacggt cggcccgcgc gtctcgggcg agctcgtgca gtccggcacc
     4741 atcggcgtcg tcctgtcggt gctcgccgtg ctcctgtacc tgtggttccg cttcgagcgg
     4801 gagcttgcga tcggcgccat catcggcacg ctgcacgaca tcgtgctgac cgtcggcttc
     4861 ttcgtcatca cgcggctcga gttcaacatg acctcgatcg ccgcgatcct caccatcgtc
     4921 ggttactcgc tgaacgagac cgtggtcgtg ttcgaccgca cgcgcgagct gctgcggcgc
     4981 tacaaggcga tgcccacgga gcagctgctc gacctgtcga tcaactccac catgtcgcgc
     5041 acggtgatga ccgcgacgac cgcgttcctg tcgctgctcg ccctcgtgtt gttcggcggc
     5101 aaggccatcg aagacttcgc gctcgtcatg ctgttcggcg tcgtgatctg cacctattcg
     5161 gcgatcttca tctcgtcgcc ggtgctgatc tatatcggcg tgctcgggcg cggcgtggac
     5221 gtgccggcca agggcaccac ggtggcgcag ccggcggagt gacggctttg gccatcggcc
     5281 ggacctacga cggtttcgtt cccggccgct atcccatcga cgcctacggg gccggtggct
     5341 tccgcttcgc cgacatgtcg catcgcggct cgatcctggc gctgccgtcg ggcatcaagg
     5401 cgtgggcgcc gacgtcgggg cgcgcgctga cggccgagga cttcgcgccc gcgctcgacg
     5461 agagcggcgc catcgagctc ctgctggtcg gcaccgggag cgacgtcgtc ccgttgttgg
     5521 aacaggtgcg ctggtacttg cgcgacgcag gcatcaggca cgacgtgatg cagacgggtg
     5581 cggctgcccg gacctacaac atcctgc
//
LOCUS       DATAIQ010000048         4925 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_2161, whole genome shotgun sequence.
ACCESSION   DATAIQ010000048 DATAIQ010000000
VERSION     DATAIQ010000048.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4925)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4925)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4925
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2161"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..306
                     /locus_tag="VHN20_00715"
     CDS             <1..306
                     /locus_tag="VHN20_00715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012331968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02301 family protein"
                     /protein_id="HEX2724321.1"
                     /translation="PAPPYEKDLLRLSEIVGSLAFLRSLCASSDAAEWPKRMQALLES
                     EGTTPGRRERLAGAYNRGYRGYALTYRVCTPSATEAMARYLKEGEALSRNLAGRYGG"
     gene            429..689
                     /locus_tag="VHN20_00720"
     CDS             429..689
                     /locus_tag="VHN20_00720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010681931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724322.1"
                     /translation="MSNNELLTVSEPTEIRAAKRAALSYVTEAFAEAELDGLDPDCMI
                     HAALFAAFRELVMTYGEEAAAMYAECLPERVRAGAFTTGPRH"
     gene            1081..1959
                     /locus_tag="VHN20_00725"
     CDS             1081..1959
                     /locus_tag="VHN20_00725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012320918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="folate-binding protein"
                     /protein_id="HEX2724323.1"
                     /translation="MPTAHLADRGVVTVTGEEARPFLDGLVTCDLARLAPGRPVFGAL
                     LTPQGKILFDFIVFEAPAQAGGGFFFDVARASAADLAKRLGFYKLRAKVAIADASDAF
                     AVIAGWAGAAEPDEAELAGDDPRLPALGWRAILAKTSVATPGDAAGDYHAHRIALGVP
                     EGGKDFPFNDAFPHEALMDQLGGVDFDKGCYVGQEVVSRMQHRGTTRTRIVPLVYRDA
                     AVAEPGAPVTAGDKTLGRTATGMRGRGLAMLRLDRAADALAAGQELRAGGLPVSLHKP
                     DWVGFSFPSGAATSAA"
     gene            1956..2567
                     /locus_tag="VHN20_00730"
     CDS             1956..2567
                     /locus_tag="VHN20_00730"
                     /EC_number="3.2.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008725 - DNA-3-methyladenine glycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HEX2724324.1"
                     /translation="MIDGLVAHPDGKSRCWWPGTDELYVGYHDDEWGVPELDDRALFE
                     KLILDGFQAGLSWITILRKRENFRRAFAGFDPEAIARFDAAHVEALMGDAGIVRNRAK
                     IEGTVASARAFLAVQERHGFARFVWDFVDGRPVDGRRKGRGDIPAETDASRRLSKALK
                     QEGFAFCGPTIVYAFMQAVGMANDHLVGCFRHAECAALAGRVP"
     gene            2564..3160
                     /locus_tag="VHN20_00735"
     CDS             2564..3160
                     /locus_tag="VHN20_00735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015933035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD family hydrolase"
                     /protein_id="HEX2724325.1"
                     /translation="MTSRVPPRAWQRMLSGRRLDLLNPSPFDIEIGDIAHGLARVARW
                     NGQTSGPHIFSVAQHSLFVEAIARHLDPDLSDAALLAVLLHDAPEYVIGDIISPFKAV
                     IGDAYKEVEERLLAAIYVRFGLPVDPGGHLWRLTKRADQIAAFLEATRLAGFSRDEAA
                     RFFGRPEPLPLELLEEFLSPWLVEEAQKRYLARIKDLI"
     gene            3250..3522
                     /locus_tag="VHN20_00740"
     CDS             3250..3522
                     /locus_tag="VHN20_00740"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015933124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HEX2724326.1"
                     /translation="MKASAMTPADTPSDIAGLTFEKALAELESIVQRLEQGRVELEES
                     VTIYERGEALKKHCEALLKRAEARIEKITIGPDGQAAGTSPLDVES"
     gene            3554..>4925
                     /gene="dxs"
                     /locus_tag="VHN20_00745"
     CDS             3554..>4925
                     /gene="dxs"
                     /locus_tag="VHN20_00745"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012171635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008661 - 1-deoxy-D-xylulose-5-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009240 - isopentenyl diphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HEX2724327.1"
                     /translation="MQPSLTPLLDKVRTPEDLRRLPQSELRQVAAELRAETVDAVSVT
                     GGHLGAGLGVVELTVALHYVFDTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRQGGGL
                     SGFTRRVESDYDPFGAAHSSTSISAGLGMAVARDLDGKPHNVICVIGDGAMSAGMAYE
                     AMNNAGAMHSRLIVILNDNDMSIAPPTGAMSAYLARLVSGRAYRSLREIGKQLTRRLP
                     KVFYEKAELAEEYARGFWTGGTLFEEMGFYYVGPIDGHNLDHLLPVLKNVRDSGTGPV
                     LVHVFTQKGKGYGPAENSADKYHGVVSFDVVTGAQAKPKANAPSYTKVFADSLVKEAR
                     RDDKIVAITAAMPSGTGLDLFAKEFPARTFDVGIAEQHAVTFAAGLAAEGYKPFCAIY
                     STFLQRAYDQVVHDVAIQKLPVRFAIDRAGLVGADGPTHAGSFDIAYLACLPDFAVMA
                     AADEAEL"
BASE COUNT          763 a         1687 c         1659 g          816 t
ORIGIN      
        1 ccggcgcccc cgtacgagaa agacctgctg cggctctccg agatcgtcgg ctcgctcgcc
       61 ttcctgcgca gtctctgcgc gtcgtccgac gcggccgagt ggccgaagcg catgcaggcc
      121 ctgctcgaga gcgaaggcac gacgccaggt cggcgcgagc gcctcgctgg cgcctacaac
      181 cgtggctatc gtggttacgc gcttacttac cgcgtttgta caccatccgc gacggaggcg
      241 atggcgcgct atctgaagga aggcgaggcg ctgtcgcgca acctcgcagg acgttacggc
      301 ggctgacgcg ccgcgtcgtc atccacgctt cttcttgccg ttaacctcac cgcgacgtga
      361 gggtggcgag acgcaggccc cgacagtaag gtccgcggct ggggtacgtg gcgtatgagc
      421 gacgggtaat gagcaacaac gaacttctga ctgtttccga accgaccgaa atcagggcgg
      481 ccaagcgcgc ggcgctcagt tacgtgactg aggcattcgc ggaagccgag ctcgacgggc
      541 tcgatccgga ttgcatgatc catgcggcgc tgttcgccgc tttccgcgag ctcgtcatga
      601 cctatggcga ggaggcagcc gcgatgtacg ccgagtgcct gccggagcgc gtgcgcgccg
      661 gcgccttcac gaccgggccg cgccactaaa cgctcgggtc ggcgctcccg gccgggcgca
      721 tcacacaaca catcagcgat gacggcggag cgggatctga tcccgctccg cttctcattg
      781 ggacgcatga tccttttcgg tgaagtggtg cccaccccgg atcaggtccg ggccaggctt
      841 tcgccggatc atgctctgag gcgctcgcgt cgaggcggcc cttgagcccg ttgcgtgcgc
      901 ggcctatgtc tcgacacgag cattttgcgg tgaagtcacc gcacgggtgc gggggccggc
      961 ccgttcgggg attccctctt gtcgggatcg ggccggacgc gtccgtgttc ttccggaaga
     1021 atgcatcaag gatctccggg gccgaccagc gcggaacggc tcctgagcga aggagtggcc
     1081 atgccgacgg ctcatctggc cgaccgcggc gtcgtgacgg tgaccggcga ggaagcgaga
     1141 ccgtttctcg acgggctcgt gacctgcgat ctcgcgcgcc ttgcgccagg caggcctgtc
     1201 ttcggcgcgc tgctgacgcc gcagggcaag atcctgttcg acttcatcgt gttcgaggcg
     1261 ccggcgcagg ccgggggcgg ctttttcttc gacgtggcgc gcgcgtcggc cgccgatctc
     1321 gcaaagcgtc tcggcttcta caagctgcgc gccaaggtcg cgatcgccga cgcatccgac
     1381 gcctttgcgg tgatcgcggg ctgggccggg gccgccgagc ctgacgaggc ggagctcgct
     1441 ggtgacgacc cgcgcctgcc ggcccttggc tggcgcgcca tcctcgcgaa gacgagtgtc
     1501 gcaacgcctg gtgacgccgc cggcgattac cacgcccacc ggatcgcgct cggcgttccg
     1561 gaaggcggca aggattttcc cttcaacgac gcctttccac acgaagcgct gatggaccag
     1621 ctcggcgggg tcgatttcga caagggctgc tatgtgggcc aggaagtggt gtcgcgcatg
     1681 cagcaccgcg gcacgacccg cacgcgcatc gtcccgctcg tctatcgcga cgccgccgtg
     1741 gccgagccgg gagcgccggt caccgccggc gacaagacgc tcggcagaac cgccaccggc
     1801 atgcgcggcc gcggcctcgc catgctgcgc ctcgatcgcg ccgccgatgc actcgccgcc
     1861 gggcaggagc ttcgtgccgg cggcctcccg gtgtccctgc acaagcccga ctgggtcggc
     1921 ttttcctttc caagcggcgc cgctacatcc gccgcatgat cgacggcctg gtcgcgcatc
     1981 ccgacggaaa gagccgctgc tggtggcccg gcacggacga actgtacgtc gggtatcacg
     2041 atgatgaatg gggcgttccc gagctcgacg accgggcgct gttcgagaag ctgatcctcg
     2101 acggcttcca ggccgggctg tcgtggatca cgatcctgcg caagcgcgag aatttccggc
     2161 gcgccttcgc gggtttcgat ccggaagcga tcgcgcgctt cgacgcggcg catgtcgagg
     2221 cgctgatggg cgacgccggc atcgtgcgca accgcgccaa gatcgagggc acggtggcgt
     2281 cggcgcgcgc cttcctcgcc gtgcaggagc ggcacggatt cgcgcgcttc gtgtgggatt
     2341 tcgtcgacgg ccgcccggtc gacggccgcc gcaagggccg cggtgatatc ccggccgaga
     2401 cggacgcgtc gcggcgcttg tccaaggccc tcaagcagga aggctttgcc ttctgcggcc
     2461 cgacgatcgt ctatgccttc atgcaggcgg tcggcatggc caacgaccac ctcgtcggct
     2521 gtttccggca tgccgaatgc gcagcccttg ccgggcgggt gccatgacca gccgggttcc
     2581 gccgcgcgcc tggcagcgca tgttgtcggg gcgccgtctc gaccttctca atccgtcgcc
     2641 cttcgacatc gagatcggcg acatcgcgca cggcctcgcc cgcgtcgcgc gctggaacgg
     2701 ccagacgtcg gggccgcata tcttctcggt cgcgcagcat tcgctgttcg tcgaggcgat
     2761 cgcccgtcac ctcgatccgg acctgagcga cgcggcgctt ctggccgtgc ttctgcacga
     2821 cgcgccggaa tacgtgatcg gcgacatcat ctcgccgttc aaggcggtga tcggcgacgc
     2881 ctataaggag gtcgaggagc ggctcctggc ggcgatctat gtgcgcttcg gcctgccggt
     2941 cgacccgggc ggacatctgt ggcgcctgac caagcgcgcc gaccagatcg cggcgtttct
     3001 cgaggcgacc cggctggccg gcttttcacg cgacgaggcc gcacgcttct tcggccggcc
     3061 cgagcccctg ccgctggagc tgctcgagga gttcctgtcg ccatggcttg tcgaggaggc
     3121 ccagaagcgc tacctcgccc gcatcaagga tctgatctga gccaaggatt ctctcttctt
     3181 cgaggaccgg cgcgagagtg acaatccggc cgcttgtcac cggtagggcg aacccccata
     3241 agcatcgcaa tgaaagcttc tgcgatgacc cctgccgata ccccgtccga cattgccggc
     3301 ctcaccttcg aaaaggccct ggccgagctc gagagcatcg tgcagcggct cgagcaggga
     3361 cgggtcgagc tcgaggaatc ggtgacgatc tacgagcgcg gcgaggccct caagaaacat
     3421 tgcgaggcgc tcctcaagcg cgccgaggcg cgcatcgaga agatcacgat cggccctgac
     3481 gggcaggcgg ctggaacgag cccgctggac gtggaatcct gaagacgcgg ccgaaccggt
     3541 atcgtctgaa cgaatgcagc cgtccctgac cccgcttctg gacaaggtcc gcacgcccga
     3601 ggatcttcgc cgcctgccgc agagcgagct gcgccaggtc gccgccgagc tgcgcgccga
     3661 gacggtcgac gccgtgtcgg tgaccggcgg gcatctgggc gccggtctcg gcgtcgtcga
     3721 gctcaccgtg gcgctgcact acgtgttcga cacgccgcgc gaccggctga tctgggacgt
     3781 cggccaccag gcctatccgc acaagatcct gaccgggcgg cgtgaccgca tccgcacctt
     3841 gcgtcagggc gggggcctgt cgggcttcac gcgccgcgtc gagagcgact acgacccgtt
     3901 cggcgcggcg cattcctcga cctccatctc ggcaggcctc ggcatggccg tggcgcgcga
     3961 tctcgacggc aagccgcaca acgtgatctg cgtgatcggc gacggcgcca tgtcggcggg
     4021 catggcctac gaggccatga acaacgccgg cgcgatgcat tcgcgcctga tcgtgattct
     4081 caacgacaac gacatgtcga tcgcgccgcc gaccggcgcc atgtcggcct atctggcgcg
     4141 tctcgtgtcg ggacgcgcct accgctcgct gcgcgagatc ggcaagcagc tcaccaggcg
     4201 cctgccgaag gttttttacg agaaggccga gctggccgaa gaatatgcgc gcggcttctg
     4261 gaccggcggc acgctgttcg aggagatggg cttctattac gtcggcccga tcgacgggca
     4321 caatctcgac cacctcctgc cggtgctcaa gaacgtgcgc gattcgggca ccggtccggt
     4381 cctcgtgcac gtgttcacgc agaagggcaa aggctacggg ccggcggaga actcggcgga
     4441 caagtatcac ggcgtcgtca gcttcgacgt ggtgacgggc gcccaggcca aacccaaggc
     4501 caatgcgccg agctacacca aggtgttcgc cgacagcctc gtcaaggagg cgcggcggga
     4561 cgacaagatc gtcgcgatca cggcggcgat gccgtcgggc accgggctcg atctgttcgc
     4621 caaggagttt ccggcccgca ccttcgacgt cggcattgcc gagcagcatg cggtgacctt
     4681 cgcggccggc ctcgcggcgg aaggctacaa gccgttctgc gccatttatt cgaccttcct
     4741 gcagcgcgcc tacgaccaag tcgtccacga cgtcgccatc cagaagctgc cggtccggtt
     4801 cgccatcgac cgcgccggcc tcgtcggcgc ggacgggccg acgcatgcgg gctccttcga
     4861 catcgcctat ctcgcctgcc tccctgattt cgccgtgatg gcggccgccg acgaagccga
     4921 gctcg
//
LOCUS       DATAIQ010000049         1854 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_139492, whole genome shotgun sequence.
ACCESSION   DATAIQ010000049 DATAIQ010000000
VERSION     DATAIQ010000049.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1854)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1854)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1854
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_139492"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..237
                     /locus_tag="VHN20_00750"
     CDS             <1..237
                     /locus_tag="VHN20_00750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012707742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KOW motif-containing protein"
                     /protein_id="HEX2724328.1"
                     /translation="PDAEAERIKGQVAEGVDRPKPSIHFEIGEQVRVADGPFASFNGI
                     VEEVDESRARLKVAVSIFGRATPVELEYGQVEKT"
     gene            436..885
                     /gene="rplK"
                     /locus_tag="VHN20_00755"
     CDS             436..885
                     /gene="rplK"
                     /locus_tag="VHN20_00755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010686899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HEX2724329.1"
                     /translation="MAKKITGYVKLQVPAGAANPSPPIGPALGQRGLNIMEFCKAFNA
                     KTAQMEKGTPIPVIITAYQDRSFTFEMKQPPVTYFLKRAAGLKLGKKPASGSKTPGKG
                     GAVGRVTEAQLREIAAVKMPDLNCESVDAAVAMIRGSARAMGLEVVA"
     gene            898..1599
                     /gene="rplA"
                     /locus_tag="VHN20_00760"
     CDS             898..1599
                     /gene="rplA"
                     /locus_tag="VHN20_00760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HEX2724330.1"
                     /translation="MAHQGKRIRAAREGVDATKLYGIQDAVKLIKERAKAKFDETVEI
                     AMNLGVDPRHADQMVRGVCNLPNGSGRTVRVAVFARGAKADEARAAGADIVGAEDLVE
                     TVNGGTIDFDRCIATPDMMPLVGRLGKVLGPRGLMPNPKVGTVSMDVAGAVRAAKGGA
                     VEFRVEKAGIVHAGVGKASFDEAKLVENIRAFVDAVAKAKPAGSKGTYIQRVAVSSTM
                     GPGVKVDPGSALTGA"
BASE COUNT          328 a          628 c          632 g          266 t
ORIGIN      
        1 ccggatgccg aagccgagcg catcaagggg caggtggccg agggcgtcga ccgcccgaaa
       61 ccgtcgattc atttcgagat cggcgagcag gtgcgcgtcg ccgacggccc gttcgcgtcg
      121 ttcaacggca tcgtcgagga ggtcgacgag agccgcgccc ggctcaaggt ggcggtgtcg
      181 atcttcggcc gcgccacgcc ggtcgaactg gaatacgggc aggtcgagaa gacctaaccg
      241 tcggcagtcg gcaatcggca gtaggcagtc gggaacacgc gcttgcggtc acgactgctg
      301 actgcccact gccgattgcc ctaacccgcg ggaggctcgt ccggtcgcca gccggacctc
      361 gacaggagcc gcaccgcgac ctgcaaccgc ccgaagccgg ccggcagccg gatcgggcta
      421 tctgggagca gtcccatggc aaagaagatc acgggctacg tgaagcttca ggtcccggcc
      481 ggcgcggcga acccgtcgcc gccgatcggt cccgcgctcg gtcagcgcgg cctcaacatc
      541 atggagttct gcaaggcctt caacgcgaag accgcgcaga tggagaaggg caccccgatc
      601 ccggtgatca tcaccgcata tcaggaccgc tcattcacct tcgagatgaa gcagccgccc
      661 gtcacgtact tcctcaagcg cgcggcaggg ctgaagctcg gcaagaagcc ggcctcgggc
      721 tcgaagaccc cgggcaaggg cggggccgtc ggccgcgtga cggaagcgca gctgcgcgag
      781 atcgccgccg tcaagatgcc cgacctcaac tgcgagtcgg tcgacgccgc cgtcgccatg
      841 atccggggtt ccgcccgggc catgggcctc gaagtcgtcg cttaagggga ggggaccatg
      901 gcacatcaag gcaagcgtat ccgggccgcc cgcgagggcg ttgacgccac caagctctac
      961 ggcatccagg atgccgtgaa gctcatcaag gagcgcgcca aggcgaagtt cgacgagacc
     1021 gtcgagatcg ccatgaatct cggcgtcgac ccccgccacg ccgaccagat ggtgcgcggc
     1081 gtctgcaacc tgccgaacgg ttccggccgc acggtgcggg tggcggtgtt cgcgcgcggc
     1141 gccaaggccg acgaggcacg cgccgccggg gccgacatcg tcggcgccga ggatctggtc
     1201 gagaccgtca acggcggcac catcgacttc gaccgctgca tcgccacgcc cgacatgatg
     1261 ccgctcgtcg gccgtctcgg taaggtcctg ggtccccgcg gcctgatgcc gaacccgaag
     1321 gtcggcacgg tgtcgatgga cgtcgccggc gccgtgcgcg ccgccaaggg cggcgccgtc
     1381 gagttccggg tcgagaaggc gggcatcgtc cacgccggcg tcggcaaggc gtcgttcgac
     1441 gaggccaagc tggtggagaa catccgcgcc ttcgtcgatg cggtcgccaa ggccaagccg
     1501 gccggctcga agggcaccta catccagcgg gtggcggtgt cctcgaccat gggccccggc
     1561 gtcaaggtcg acccgggcag cgccctcacg ggcgcgtaag ccggcatcct tcagaaaagc
     1621 gaaaggcccg gccccgtgcc gggccttttg cataggggag ggggccacga tacgggccga
     1681 tctcaactgc ttcggccgta gggtccgagc ttcaacattg ccgctttccg ctgcactgcg
     1741 gcaaaaaggg cttgactttt ttgccaaatc ctcttggcag cggcgcttcg acccattatt
     1801 gagacggccc atgtctcaaa attaccacga gggccggcgg attcgccggg cttc
//
LOCUS       DATAIQ010000050         1621 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_371425, whole genome shotgun sequence.
ACCESSION   DATAIQ010000050 DATAIQ010000000
VERSION     DATAIQ010000050.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1621)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1621)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1621
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_371425"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..527
                     /locus_tag="VHN20_00765"
     CDS             <1..527
                     /locus_tag="VHN20_00765"
                     /inference="COORDINATES: protein motif:HMM:NF015436.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transporter associated domain-containing
                     protein"
                     /protein_id="HEX2724331.1"
                     /translation="KDVFNAYFENDFTPTVDEIIRTPLFVPESMGVLDLLARMRAERV
                     HLAIVIDEFGGTEGLVTIEDVVEEIVGDIADEHDEEEQPRLSRLEDGLWEADARVELD
                     ELAECVDSRLTAEDDEVDTLGGLAFLLAGRILPPGESVAHPSGWRLESVEADERKMHR
                     LRLHAPEEGEREDA"
     gene            564..>1621
                     /gene="lnt"
                     /locus_tag="VHN20_00770"
     CDS             564..>1621
                     /gene="lnt"
                     /locus_tag="VHN20_00770"
                     /inference="COORDINATES: protein motif:HMM:TIGR00546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016410 - N-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006497 - protein lipidation [Evidence
                     IEA];
                     GO_process: GO:0042158 - lipoprotein biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HEX2724332.1"
                     /translation="MAFATGLISAFAFQPVGWWPLMPLAFAVLAYLIEQAPSVRRALL
                     LGWLFGVGQFVLGLNWIATAFTFQAAMPAWYGWIAVVLLSLYLALYPALATGLAWRFG
                     RRSPAALIPALAGGWALTEYLRATMFTGFAWNPVGVTLIDTAWRGWAQLIGTYGLSAW
                     VILLGGLLFLALGRRGVRHASPRMVGLGIAAALAVSWFLPFVLTPSRAASSRLAIRVV
                     QPNIGQEDKWREGLDEEAFQRLGSLSGGGASPRLLFWPEVAVPVPFQATPSDSRQLAI
                     TLPPAQRAARLLRPGDLLVTGAFGLVVDRQGRITGETNSVMPIDAQGRVLGRYDKAHL
                     VPYGEYLPMRPLLSAIGLS"
BASE COUNT          230 a          542 c          525 g          324 t
ORIGIN      
        1 tcaaggatgt gttcaacgcc tacttcgaga acgacttcac ccccacggtc gacgagatca
       61 tccgcacgcc cttgttcgtg ccggagtcga tgggcgtact cgaccttctt gcccgcatgc
      121 gggccgagcg cgtgcacctc gccatcgtca tcgacgagtt cggcgggacc gaaggccttg
      181 tcaccatcga ggacgtggtc gaggagatcg tcggcgacat tgcggacgag catgatgagg
      241 aagaacaacc gcggctgtcc cgcctggagg acggtctgtg ggaagcggat gcgcgggtgg
      301 agctggacga gcttgccgaa tgcgtcgact cccgcctgac ggccgaggat gacgaggtcg
      361 acacgcttgg cggcctcgct tttctgctcg ccggccgcat tctgccgcca ggcgaaagtg
      421 ttgcgcaccc ttccggttgg cgcctcgagt ccgtggaagc ggacgagcgc aagatgcacc
      481 gcctccggct ccatgcgccg gaagaaggcg agcgcgaaga cgcctagcct gaagtgaccc
      541 tgcctccccg aagtttgccg ctggtggcgt tcgccacagg cctcatctcg gccttcgcct
      601 ttcagccggt cggctggtgg ccgctgatgc cgctggcgtt tgcggtgctg gcttacctta
      661 ttgagcaagc gcccagtgtg cggcgggcgc tgctcctcgg ctggttgttc ggggttggcc
      721 agttcgtcct tggcctcaac tggatcgcga ccgccttcac ctttcaggcg gccatgcccg
      781 cctggtacgg ttggatcgcc gtcgtgctgc tcagcctgta cctggcgtta tatcctgcgc
      841 tcgcgaccgg tctcgcctgg cgcttcgggc gacgctctcc agccgcgttg atcccggcac
      901 tcgccggggg atgggcgctc accgaatacc tccgcgccac catgttcacc ggcttcgcgt
      961 ggaacccagt tggggtgacg ctgatcgata cagcctggcg tgggtgggca cagctgatcg
     1021 gaacctacgg cctgtcggct tgggtgatcc tgctcggcgg cctcctcttc cttgcccttg
     1081 gcagaagagg cgttcgacac gcgtcacctc ggatggtcgg gttgggcatt gcagcggctc
     1141 tggccgtttc ttggtttctt cccttcgttc ttacgccaag ccgagcggcg agttcgcgct
     1201 tggcgatccg cgtcgtccag ccgaacatcg gccaggagga caaatggcgc gagggtctcg
     1261 acgaggaggc gttccagcgt ctcggttcct tgtcgggcgg cggcgcttcc ccgcgcctgc
     1321 tcttttggcc cgaggttgcg gttccagtgc ccttccaggc aacgccgagc gactcgcgcc
     1381 aactcgccat cacgcttccg cccgctcagc gcgcagcccg cctgctccgg ccgggtgacc
     1441 tgctggtgac tggagctttc ggactagttg tcgacaggca aggccgcatc accggcgaaa
     1501 ccaacagcgt catgccgatc gacgcgcagg gtcgcgtcct cggccgctac gacaaggccc
     1561 atctcgtccc ctatggcgaa tacctgccga tgcgcccgct gctcagtgcc ataggcctgt
     1621 c
//
LOCUS       DATAIQ010000051         2278 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_2323, whole genome shotgun sequence.
ACCESSION   DATAIQ010000051 DATAIQ010000000
VERSION     DATAIQ010000051.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2278)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2278)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2278
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2323"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1221
                     /locus_tag="VHN20_00775"
     CDS             <1..1221
                     /locus_tag="VHN20_00775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HEX2724333.1"
                     /translation="ILTNADGAEDFKIVTAPVARPGRGGWRDLIPHRPGVMIRFHMAL
                     ARHLVRLEMEDAKPRIVSREIWTGEEHAVAFDEEAYSLGISPGFAFDTDTIRFTYSSM
                     TTPAEVYDYDLRTRERRLRKRQQVPSGHNPADYVTRRLFATAPDGERVPVSIVHRRDV
                     ARDGSAPLLLYGYGAYGFATPAEFRTNPLSLVDRGFVYAIAHVRGGTEKGWRWYLQGK
                     RENKPNTFTDFIAAAEALVEARYTSRGRIAAFGGSAGGMLMGAVANMAPHLFAAIVAD
                     VPFVDVLNTMLDEDLPLTPPEWPEWGNPGQDERAFATILSYSPYDNVRPQRYPAVLAL
                     GGLTDPRVTYWEPAKWVARLRATMPGGGPVLLRINMEAGHAGASGRFDRLEEVALIYA
                     FTIKAVEGFGDVSA"
     gene            complement(1262..1951)
                     /locus_tag="VHN20_00780"
     CDS             complement(1262..1951)
                     /locus_tag="VHN20_00780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007567647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724334.1"
                     /translation="MVFALYIVALAMVAGGLSAIYLGSDIIVMERGWTMVISGAVIAA
                     AGALLAGVATAVARLQAIEHEFAVLRDRLARSDFDAATAQLAAPRRSAPPRGAGGAAM
                     AAAGLTASRDFELPPEPRLGDTPVAAGPAPGQPAPVPAGHEAALIEAEGGKAAAGAQA
                     GTVTTPESSEAAGGPTVVGTYNSGGNFYIMYSDGSIEAETPAGKFRFLSLDELKDFIA
                     AGGDKAKARPA"
BASE COUNT          371 a          811 c          727 g          369 t
ORIGIN      
        1 attttgacca atgcggacgg cgccgaggac ttcaagatcg tgacagcgcc ggtggcacgt
       61 ccggggcgcg ggggctggcg cgatctgatc ccgcaccggc caggcgtgat gatccgcttc
      121 catatggcct tggcgcgcca cctcgtcagg ctggaaatgg aggatgccaa gccccgcatc
      181 gtgtcgcggg agatctggac gggcgaagag cacgcggtcg ctttcgatga agaggcctat
      241 tccctcggca tcagccccgg cttcgccttc gacaccgaca cgatccgctt cacgtattcg
      301 tcgatgacga cgcccgccga agtctacgac tatgacctgc gcacgcgcga gcgccgcctg
      361 cgcaagcggc aacaggtccc aagcggccac aatccggccg actacgtcac gcgcaggctg
      421 ttcgcgacgg ctcccgacgg cgagagggtg ccggtctcga tcgtgcaccg ccgcgatgtc
      481 gcccgcgacg gatcggcccc gctgctgctt tacggctacg gcgcctatgg cttcgccacg
      541 ccggcggaat tccgcaccaa tccgctgtcg ctggtggacc ggggcttcgt ctacgccatc
      601 gcccatgttc gcggcggcac cgagaaagga tggcgctggt atcttcaggg caagcgtgag
      661 aacaagccga acacgttcac ggatttcatc gccgcagccg aggccctggt ggaggcgcgt
      721 tacacgtccc gcggccggat cgctgcattc ggcggcagcg ccggcggcat gctcatgggc
      781 gccgtcgcca atatggcgcc gcacctgttt gccgccatcg ttgccgacgt gccgttcgtc
      841 gacgtgctca ataccatgct cgacgaggat ctgccgctga cgccgcccga atggccggaa
      901 tggggcaacc ccggccagga cgagcgcgct ttcgcgacca ttctatcgta ttcgccctac
      961 gacaacgtgc gcccgcagcg ttatcccgcc gtgctggccc tgggcggcct gaccgatccg
     1021 cgcgtgacct attgggagcc ggccaaatgg gtcgcgcggc tgcgcgccac catgcctggc
     1081 ggcggccctg ttctcctcag gatcaacatg gaagcgggcc atgccggcgc ctcgggccgc
     1141 ttcgaccggc tcgaggaagt ggccctgatc tatgcgttca cgatcaaggc ggtggaagga
     1201 ttcggcgacg tgagcgcctg aaggtttcgg cgaagcggca tccccttcgc cggatcatgc
     1261 tctaagccgg ccgcgccttc gccttgtcgc cgccggcagc aatgaagtcc ttcagctcgt
     1321 cgagcgacag gaagcggaat ttgcccgccg gcgtctccgc ttcgatcgat ccgtcggaat
     1381 acatgatgta gaaattgccg ccggaattat acgtacccac caccgtcggg cccccggcgg
     1441 cctccgaaga ttcgggcgtg gtcacggtgc cggcctgcgc gcccgcagcc gccttgccgc
     1501 cctccgcttc gatcagcgcg gcctcgtgcc cggccggcac cggggcgggc tggcccggcg
     1561 ccggaccagc ggcgacgggc gtgtcgccga gccggggttc cggcggaagt tcgaagtcgc
     1621 gcgacgcggt aaggccggcc gcggccatcg ctgccccccc cgctccgcgt gggggcgcgc
     1681 ttctcctggg cgctgccaat tgcgccgttg cagcgtcgaa atcagaacgt gcaaggcgat
     1741 cgcgcagcac cgcaaactcg tgctcgatag cctgcagacg cgccacggcg gtcgcgaccc
     1801 cggcgagcag cgcgccggcc gcagcgatca cggcgccgga gatcaccatg gtccagccgc
     1861 gttccatgac gatgatgtcc gagccgagat aaatcgcgga gagcccaccc gccaccatcg
     1921 ccagcgcgac gatatacaaa gcgaagacca tctctcaccc acagcccaac gggccaacag
     1981 ccccgggaca gtaaagtttc gctccccttt tgcaaccgcc agcgccttct ccgagggcgt
     2041 tatgggctgt tgattgcccc tggatcaccc tggtcggggg cgcgccgccc cggtcacatg
     2101 gccccggcat ccccgcgcgc gtctaccgat ccgaggcacc gcgccggaca cgcgggccgt
     2161 tgccgtgagg cgcgccacgc tttaatgaac cggaagtcca gccaacatgc cgtgattaag
     2221 gagacgtcga tgtcgttcac cctccccgac cttccttacc cctatgacgc ccttcagc
//
LOCUS       DATAIQ010000052         3448 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_371526, whole genome shotgun sequence.
ACCESSION   DATAIQ010000052 DATAIQ010000000
VERSION     DATAIQ010000052.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3448)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3448)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3448
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_371526"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(135..887)
                     /locus_tag="VHN20_00785"
     CDS             complement(135..887)
                     /locus_tag="VHN20_00785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX2724335.1"
                     /translation="MTLVAQTFAPDLFRDRTVLVTGGTSGIGLGCAQAFRDLGAGVVA
                     TGATAAEQARAAADHGNRGISFPILDVRDAAALERLVGGLQRLDVVVNAAGVIRRDEE
                     HDPDVFADVLAVNLTGVMRVCAAARPKLAEAGGAVVNLASMLTFFGGARVPAYSASKG
                     GVGQLTKSLAAAWAADGVRVNAVAPGWIATPLTQALQDDVERSRPILDRTPLGRWGTP
                     EEVAGAVVFLASPAARFITGAILAIDGGYLAV"
     gene            complement(957..1814)
                     /locus_tag="VHN20_00790"
     CDS             complement(957..1814)
                     /locus_tag="VHN20_00790"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF014698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEX2724336.1"
                     /translation="MFRKRRLSDRLGVALDGIDLSKPLSDSAFRDVEQAFWDGQVLAI
                     KGQRLSPAQFLAFARLFGRPEPHVIDTFHHPDAADILILSNRRKPDGSPAGLADGGTY
                     FHTDYSYLDVPARVTMLYSVEVPAKGGNTLFADMYAAYDDLPATMKARIDDLVVLHHY
                     GNRDDLDETSRTAASRLSDDQKRKVTWVRHKLVRTHYGTGRKALYAVSGSSFEIEGMS
                     PDEGRALLDELKAHALQDTYRFSYFYDVGDVLLWDDLATLHSATLTDPDDPRTLWRIT
                     VKEPVGAFA"
     gene            complement(1840..3048)
                     /locus_tag="VHN20_00795"
     CDS             complement(1840..3048)
                     /locus_tag="VHN20_00795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724337.1"
                     /translation="MVLAHGAQAQAPALPDGAAKEIVTGVCTGCHQTSEIVRSSGYSR
                     DGWKALTGTMIDLSASPEREGILDYLAQHFPPNTKRAPKQVAGDAQIAFKEWVAPTLG
                     QRSRDPVQAADGAIWFAGQFGNLVGRIDPATGAMKEFPLPPRALPHTVELDAAGNVWY
                     TGNANGTLGKLDPATGAITEFKMPDPNAKDPHTAVFDRSGTLWFTLQVSNMIGRLNPA
                     TGEIKLVTAKTPGARPYGIKIDANGVPWVACNGSNCLVKVDPVTMDLTEIKLPTPGTT
                     VRRLDIAADGMIWFVNSSQGKIGRFNPQTGEIKEWPSPSGPSSHPYAMAVVDGIVWYN
                     ESGMRPDMLVRFDPKSERFQSWPIPSGRIHAGIIRHMRPTRDGNLLIHQSSTNRILLV
                     TLNGTAAATR"
     gene            complement(3284..3358)
                     /locus_tag="VHN20_00800"
     tRNA            complement(3284..3358)
                     /locus_tag="VHN20_00800"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3324..3326),aa:Gly,seq:ccc)
BASE COUNT          540 a         1144 c         1197 g          567 t
ORIGIN      
        1 gggatcgcgt cagggacgac gagttccggg ggcgactcgc gcggctgcgc gtgcttgtag
       61 ggcacccatt tgtcgttcgt gggcgccgcc gtcgaggtcg gccgggtggt cacatctctc
      121 tccttcgcgc gatctcatac ggcaagatag ccgccgtcga tggcgagtat agcgcccgtg
      181 atgaagcggg cggcggggga tgccagaaaa acgaccgcgc cggcgacctc ctccggtgtt
      241 ccccagcggc cgagcggcgt cctgtcgagg atcggccggc tgcgttcaac atcatcctgc
      301 agggcctgcg tgagcggcgt cgcgatccat cccggagcga cggcgtttac ccggacgcca
      361 tccgcggccc aggccgcggc caggctcttg gtcagctggc cgacgccgcc cttcgaggcg
      421 ctgtaggcgg gcacgcgggc gccgccgaaa aacgtcagca tcgacgccag gttcaccacc
      481 gcgccgcccg cttcggccag cttcggacgc gccgccgcgc acacccgcat cacgccggtc
      541 aggttgaccg cgagcacatc ggcgaaaacg tcgggatcat gctcctcgtc gcgccggatc
      601 acgcccgccg cattgacgac gacgtcgagg cgctgcaggc cgccgaccag gcgctcgagc
      661 gcggccgcgt cgcggacgtc gagaatgggg aaggaaatgc cgcggttgcc gtgatccgcc
      721 gccgcccgcg cctgctcggc cgcggtcgcc ccggtcgcca cgacaccggc gccaagatcc
      781 cggaaagcct gcgcacagcc gagcccgatg ccgctcgtgc cgcccgtgac gagcaccgtg
      841 cggtccctga acaggtcggg cgcgaaggtc tgggcgacga gcgtcatgtc agcaggtgcg
      901 gcagcggatg cgcgatgcac ggccgtgcga acaaccggaa cgaggagctt tcgtcgtcac
      961 gcgaatgcgc ccaccggctc cttcaccgtg atccgccaca aggtgcgcgg gtcatcggga
     1021 tccgtcaggg tcgcggaatg cagcgtcgcc aggtcgtccc agagcagcac gtcgccgacg
     1081 tcgtaaaaat agctgaagcg atatgtgtcc tgtagcgcat gcgccttgag ctcgtcgagc
     1141 aaggcacggc cctcgtcggg cgacatgcct tcgatttcaa aagaactgcc ggaaacggcg
     1201 tagagcgcct tgcgcccagt gccgtagtgc gtgcgcacga gcttgtgcct gacccaggtg
     1261 accttgcgct tctggtcgtc ggagaggcgc gacgcggcgg tgcgcgacgt ctcgtcgaga
     1321 tcgtcgcggt tgccgtaatg atgcagcacg acgagatcgt cgatgcgcgc cttcatcgtc
     1381 gccggcaaat cgtcataggc ggcgtacatg tcggcgaaca gcgtgttgcc gcccttcgcc
     1441 ggcacctcga ccgagtagag catggtcacc cgtgccggga cgtcgagata ggaataatcg
     1501 gtgtggaaat aggtgccgcc gtcggcgagg ccggcgggcg agccgtcggg cttcctgcgg
     1561 ttcgacagga tcaggatgtc ggccgcatcg ggatggtgga acgtgtcgat gacatgcggc
     1621 tccggcctgc cgaacaggcg cgcgaaggct aggaactgcg ccggcgacag ccgttgcccc
     1681 ttgatggcga gcacctgccc gtcccagaac gcctgctcga cgtcgcgaaa agcgctgtcg
     1741 gacagcggct tcgacaggtc gatgccgtca agcgcgacgc cgagccggtc ggacaggcga
     1801 cgtttccgga acatcggcac gtccctttcg cgggcggcgc taacgtgtgg ccgcggcagt
     1861 cccgttcagg gtcacgagca ggatgcggtt cgtgctgctc tggtggatca gcaggttgcc
     1921 gtcacgggtc gggcgcatgt gccggatgat gccggcatga atgcggcctg acgggatcgg
     1981 ccagctctgg aagcgttcgc tcttcggatc gaagcgcacc agcatgtccg gccgcatgcc
     2041 cgactcgttg taccagacga tgccgtcgac cacggccatc gcgtagggat gcgagctcgg
     2101 cccgctcggc gaaggccatt ccttgatctc gccggtctga ggattgaacc ggccgatctt
     2161 gccttgcgac gaattcacga accagatcat gccgtcggcg gcgatgtcga gacgccgcac
     2221 cgtcgtgccg ggcgtcggca acttgatctc ggtcaggtcc atggtcacgg gatcgacctt
     2281 gacgaggcag ttgctgccgt tgcacgcgac ccacggcacg ccgttggcgt cgatcttgat
     2341 cccgtatggg cgcgcgcccg gcgtcttcgc cgtgaccagc ttgatctcgc cggtggccgg
     2401 gttcaggcgc ccgatcatgt tgctgacctg cagggtgaac cagagcgtgc cgctgcggtc
     2461 gaagaccgcc gtatgcggat ccttggcgtt cggatcgggc atcttgaact cggtgatcgc
     2521 gccggtggcg ggatcgagct ttccgagcgt gccgttggcg ttgccggtgt accagacgtt
     2581 gccggcggca tcgagctcca ccgtgtgcgg cagggcgcgc ggcggcagcg ggaattcctt
     2641 catggcgccg gtggccggat cgatgcgccc gaccaggttg ccgaactggc cggcaaacca
     2701 gatcgccccg tcggcggcct gcaccgggtc gcgcgagcgc tgtccgagcg tcggcgcgac
     2761 ccattccttg aaggcgatct gcgcgtcgcc cgcgacctgc ttcggcgcgc gcttggtgtt
     2821 gggcgggaaa tgctgagcga ggtagtcgag gatgccctcg cgctccgggc tcgccgacag
     2881 gtcgatcatg gtgccggtca gcgccttcca gccgtcgcgg ctgtagccgg agctgcgcac
     2941 gatctcgctg gtctggtggc agcccgtgca gacgcccgtc acgatctcct tggcggcgcc
     3001 gtcgggaagg gcgggcgcct gagcctgtgc cccgtgagcc aggaccatgc caagaaccga
     3061 acccgccaat cgtccaatcg ctcgcgttgc cacggcccac ctcatgcatt gcggtcgggg
     3121 ggcatggttc tgcgcaacgc ggggctagtc aagcgtccgg gggccgaatc cgggccgtcc
     3181 cggcgtcacg actttgctag agcacccgat gagggcgtcc cgggccagca ttacggagat
     3241 cacgggcctg gcgccggcat cgggaagcgg gcgagacggc aattggagcg ggcgatcgga
     3301 atcgaaccga cgacattcag cttgggaagc tgacgttcta cccctgaact acgcccgcgt
     3361 tgcggctata gatagccggc ccggccccca acctgcaagg cctccccctc ccctctctcg
     3421 tgaagcaccc cctgatgtcc atgctggc
//
LOCUS       DATAIQ010000053         6836 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_371542, whole genome shotgun sequence.
ACCESSION   DATAIQ010000053 DATAIQ010000000
VERSION     DATAIQ010000053.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 6836)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6836)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6836
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_371542"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            35..571
                     /gene="traF"
                     /locus_tag="VHN20_00805"
     CDS             35..571
                     /gene="traF"
                     /locus_tag="VHN20_00805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000086826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="conjugative transfer signal peptidase TraF"
                     /protein_id="HEX2724338.1"
                     /translation="MSRILKRIAAGVVIAGVAALLLAAGGYAAGARVNTTKSIPVGLY
                     WTSSAPVEKGAYVLFCPPQLGVFDDAKERGYIGAGFCQGGYGYMMKRVLAAKDDAVAV
                     ADDGVRVNGELLPLSAPIKADKAGRPLPRYQSNSYTLGNSEVLLMSDVSATSFDGRYF
                     GPINRSQIKTVIRPVITW"
     gene            583..2646
                     /locus_tag="VHN20_00810"
     CDS             583..2646
                     /locus_tag="VHN20_00810"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011114056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003917 - DNA topoisomerase type I (single
                     strand cut, ATP-independent) activity [Evidence IEA];
                     GO_function: GO:0098847 - sequence-specific single
                     stranded DNA binding [Evidence IEA];
                     GO_process: GO:0006261 - DNA-templated DNA replication
                     [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0051304 - chromosome separation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase III"
                     /protein_id="HEX2724339.1"
                     /translation="MRLFIAEKPSVAKAIAGELGATGKGDGFIECGTDKVTWCFGHML
                     EQADPDEYTPDDVPRGQSGKKVWRVDELPIIPESWILKPKDDAKKQLAVIGKLLKEAK
                     EIVNAGDPDREGQLLVDEVLEHFRNSKPVRRFWVSAQDSVSVKRGLAALKENTTYAGW
                     ADAARGRQRADWLIGMNLSRAYTLRAQRGGSRALLTVGRVQTPTLALVVARDREIEAF
                     KAVPYHTIRAVVQHAGGSFAAAWKAKEDQAGLDSEGRLVDTAVADALVAAVKGQPGTI
                     AAYKQEAKKQNQPLAFALSDITALASAKFGYSAEDVLNTCQALYETHKLTSYPRTDCA
                     YLPESQHADAPRVLEAIKHVNPELAGLVDGADPRIKSKTWDDSKITAHHGIVPTMQKG
                     SKAALSERERNIYDLIVRAYLAQFYPLHEYMQTTVGVEIAGENFAASGKVVTRNGWRD
                     VYSQADEEGEKDEDDDSGTQALPSMAQGDAVTCTDATRKDAKTKPPARFTEGTLIRAM
                     ENIHKFVSDAEHKKMLREGDGIGTSATRASIISELKRREFLAVKGKQIISTTLGRSVI
                     DALPEVVKSPVLTALYERMLKGVEQGTAALDAFITKQETFIRDQVAKANSGAVTIAGG
                     KEAAPVSSLHKCMACGSGLSRRPSKKKGQFWWGCSNFPTCKQTYPDLKGRPDYSKGRN
                     GPASE"
     gene            2668..3057
                     /locus_tag="VHN20_00815"
     CDS             2668..3057
                     /locus_tag="VHN20_00815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006122510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein TraD"
                     /protein_id="HEX2724340.1"
                     /translation="MNEQTTTNTAAHDEPLAVLPPVDDDAAGREAVREKMADALTPGF
                     QVEFDPDEAERVGAFVEDALSEQDAAASGDDLVEVDGALEPAFLDDEGPSADIPPFIT
                     TTNARELYDLRPGETVAQAAARKASEG"
     gene            3061..>6836
                     /locus_tag="VHN20_00820"
     CDS             3061..>6836
                     /locus_tag="VHN20_00820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006122509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zincin-like metallopeptidase domain-containing
                     protein"
                     /protein_id="HEX2724341.1"
                     /translation="MPITKAEAQGVTRAFVRDYPGALELAYKFREDAAELYGPRAAEV
                     PADMKGGYVPKETLHAGRAYRGRVDVPLQNVESAGDLLMTLRHEVLGHYGANTFAPGE
                     KRALLDGLAAARNEPTLKPLWDDVNRRYAGQSLDVRAEEVFALHCEGIEPSQHQVADQ
                     VQQRGQQSFTETCIARVRPMQADDLHNIVCMVAQGLRDRSRTQQNFPQFNELFRRDEN
                     MEPKKPFHEVVAEKLIEQLKAGTAPWQKPWEPGEPNAYLPMNPTTGKRYKGINAIHLM
                     AQGRSDARWMTYKQAAAVGAQVRKGEKGTPVQYWKFSEEQDKLDDSGRPVLDAKGQPV
                     KETVMLERPRVFFATVFNGEQIDGLPPLQPKKEQTWNAVERAEHILKASGATITHAAG
                     DRAFYRPSTDSITLPERGQFPSSDRYYATALHELGHWTGHASRLDRDLAHPFGSEGYA
                     KEELRAEIASMIVGDELGIGHDPGQHAAYVGSWIKALQDEPLEVFRAAADAEKIHDYV
                     LAFEQKQVQEQDQQQSQAQDEAVAQALAVDIAEVLDNPDVSFSHYQAFQGDTLEDALR
                     SRGLETVGSITGTDPEQFYAVAHDRLSPVFGIDPSHTDTDNAYLERKGLAQEFANMAE
                     QLHLAQQLQQHGEQIVSSIDAEARWSDGQRIFAFHDQDGEPHQVRSLDELNNYAPDQL
                     MALPALTQQQAAVADQEANMTPPTNDQAAALLAAHPADAVQGIEQAAAARRQLAAGEI
                     DGQAFADATRQHLGVELPPDWSGELRIVGVAEQDGQTVDAAQAGIEPQAFQVYARKAD
                     AQFGEDAFAFVAGTRTEGQAEALTERLHLVDALGTDNQHERAAKLARVQEERVRRDPN
                     ATEEDISAAKEARKTAEASAMLNDSDAQRRAAELERQERERQQAQPQAEKPERQYINV
                     PYKEKDEAKSLGARWDRQQQSWYVPPGTDAAPFAKWAQGAATAAVEPRSAQPAPEAQG
                     EAQKPAQQAQQARQYLAVPYEQRNAAKAAGALWDKAAKSWYVGPRADAAKLERWKPEN
                     VQAQQGPAMTPREEFAEAMRSAGLFTGSNAQGDHPIMDGKRHRVPVEGGKKGALDGFY
                     VGHLDGHPAGRIINNKTGTDITWKSKGYALSDQEKAKLQAEAAEKLAQRAVEQDKAQE
                     ATAQRVGRQMADLVPIEQPTPYLQAKGIQAQAGVMTDREGQKTYIPAFDAEGKQWTMQ
                     YIQEDGTKRFAKDSKKEGCFHPVGGMDALAAAPALVISEGYATAAQVAEAVGHAT"
BASE COUNT         1356 a         2357 c         2302 g          821 t
ORIGIN      
        1 cacaggccga gacggaaggg gagggcatca cgatatgagc cgcatcctga aacgcatcgc
       61 ggcaggcgtc gtcatcgcgg gcgtggccgc cctgctgctg gccgccggcg gctatgccgc
      121 cggtgcccgc gtgaacacca ccaagagcat tccggtcggc ctgtactgga cgagcagcgc
      181 gccggtggag aagggggcct acgtcctctt ctgcccgccg cagctcggcg tgttcgatga
      241 cgccaaggag aggggctaca tcggggccgg cttctgccag ggcggctacg gctacatgat
      301 gaagcgcgtt ttagccgcta aagacgatgc cgtcgccgtc gccgatgacg gcgtgcgcgt
      361 caacggcgag ctgctgcccc tcagcgcgcc gatcaaggcc gacaaggccg gtcggccgct
      421 gccgcgctat cagtccaaca gctacacgct cggcaattcc gaggtgctgc ttatgtcgga
      481 cgtgagcgcc acatccttcg acggccgcta cttcggcccg atcaatcgtt cgcaaatcaa
      541 gaccgtgatc cgtccggtca tcacctggta gggagacaca ccatgcgcct tttcatcgca
      601 gaaaagccgt ccgtcgccaa ggccatcgcc ggcgagctgg gcgcgaccgg caagggcgac
      661 ggcttcatcg agtgcggcac cgacaaagtg acctggtgct tcgggcacat gctcgaacag
      721 gccgaccccg acgagtacac gcccgatgac gtgccgcgcg gccagtccgg caagaaggtc
      781 tggcgcgtcg atgagctgcc catcatcccc gagagctgga ttctcaagcc caaggacgac
      841 gcgaagaagc agctcgccgt gatcggcaag ctgctcaagg aggccaagga gatcgtcaac
      901 gccggcgacc ccgaccgcga aggccagttg ctggttgacg aagtgctgga gcacttccgc
      961 aacagcaagc cggtgcgccg cttttgggtg agcgcgcagg actccgtttc cgtcaagcgc
     1021 ggcctggccg cgttgaagga gaacaccacc tatgcaggct gggccgacgc tgcacgcggg
     1081 cggcagcgcg ccgactggct gatcggcatg aacctcagcc gcgcgtacac gctgcgcgcg
     1141 cagcgcggcg gctcgcgcgc cctgctgacc gtgggccgcg tgcagacgcc gacgctggcc
     1201 ctcgtggtcg cccgcgaccg cgagatcgag gcattcaagg ccgtgccgta ccacaccatc
     1261 cgggcggtgg tgcagcacgc cggcggcagc ttcgccgccg catggaaggc gaaggaggat
     1321 caagccggtc tggacagcga aggccgcctt gtcgataccg ccgtcgccga cgccctggtg
     1381 gccgccgtca agggccagcc gggcaccatc gccgcgtaca aacaggaggc caagaagcag
     1441 aaccagccgc tggccttcgc cctgtccgac attacggcac tggcctcggc caagttcggc
     1501 tacagcgccg aggacgtgct gaacacctgc caggcgctct acgagacgca caagctgacc
     1561 tcgtacccgc gcaccgactg cgcctacctg ccggagtcgc agcacgccga cgcgccgcgc
     1621 gtgctggagg cgatcaagca cgtcaacccc gaactggccg gcctggtcga tggtgccgat
     1681 ccgcgtatca agtccaagac gtgggacgac tcgaagatca ccgcgcacca cggcatcgtg
     1741 ccgaccatgc agaagggcag caaggccgcc ctcagcgagc gcgagcgcaa catctacgac
     1801 ctgatcgtgc gcgcctacct ggcgcagttc tacccgctgc acgagtacat gcagaccacc
     1861 gtgggcgtcg agatcgcggg cgagaacttc gccgcgagcg gcaaggtagt cacgcgcaac
     1921 ggctggcgtg acgtgtacag ccaggccgac gaggaaggcg agaaggacga ggacgacgac
     1981 agcggcacgc aggccctgcc gtcgatggcc cagggcgacg ccgtgacctg cacggacgcc
     2041 acccgcaagg acgccaagac gaagccgcca gcgcgcttta ccgagggcac gctgatccgc
     2101 gcgatggaga acatccacaa gttcgtcagc gatgccgagc acaagaagat gctgcgcgag
     2161 ggcgacggca tcggcacgtc ggccacccgt gcgtcgatca tttccgagtt gaagcggcgc
     2221 gagttcctgg ccgtcaaagg caagcagatc atcagcacga ccctcggccg cagcgtcatc
     2281 gacgcgctgc ccgaggttgt gaaaagcccg gtgctgaccg cgctctacga gcggatgctg
     2341 aaaggcgtcg agcagggcac ggccgccctg gacgccttca tcacgaagca agagacgttc
     2401 atccgcgacc aggtggcgaa ggccaacagc ggagccgtga ccatcgccgg cggcaaggaa
     2461 gccgcgccgg tgtcatccct tcacaagtgc atggcctgcg gcagcggctt gtcgcgccgg
     2521 ccgagcaaga agaaggggca attctggtgg ggttgcagca acttccccac atgcaagcag
     2581 acctaccccg acctcaaggg tcggcccgac tacagcaagg gccgcaacgg cccggcatcc
     2641 gaatgaccac agcgaaggag atcgaccatg aacgagcaaa ccaccaccaa caccgccgcc
     2701 cacgacgagc cgctggccgt cctgccgccg gttgacgacg acgccgccgg ccgcgaggcc
     2761 gtgcgcgaga agatggccga cgcgctgacg cccggcttcc aggtcgagtt cgaccccgac
     2821 gaagccgagc gcgtgggcgc gttcgtggag gacgcgctgt ccgagcagga cgccgccgcg
     2881 agcggcgacg acctggtgga agtcgatggc gcgctggagc cggcattcct ggacgacgaa
     2941 ggcccgagcg ccgacatccc gccgttcatc accaccacga acgcccgcga gctgtacgac
     3001 ctgcggcccg gcgagacggt tgcccaggcc gccgcgcgca aggcgtcgga gggctgaccc
     3061 atgccgatca cgaaagccga ggcgcaaggg gtgacgcggg ctttcgtccg cgactacccc
     3121 ggcgcgctgg agctggccta caagttccgc gaggacgcgg ccgagctgta cgggccgcga
     3181 gcggccgagg tgccggccga catgaagggc ggctacgtgc ccaaggagac gctgcacgcc
     3241 ggccgcgcct accgtggccg cgtggacgtg cccttgcaga acgtcgagag cgccggcgac
     3301 ctactgatga cgctgcggca cgaggtgcta ggccactacg gggccaacac cttcgcgccg
     3361 ggcgagaagc gcgccttgct ggacggcctg gcggccgccc gcaacgaacc caccctcaag
     3421 ccgctatggg atgacgtgaa ccggcgctat gccggccagt ccctggacgt gcgcgccgag
     3481 gaagtgtttg ccctgcactg cgagggcatc gagccgagcc agcaccaggt cgccgaccag
     3541 gtgcagcagc gcggccaaca gtcattcacg gaaacctgca tcgcccgcgt gcggcccatg
     3601 caggccgacg acctgcacaa catcgtgtgc atggtcgccc agggcctgcg cgaccgttcc
     3661 cggacacagc agaacttccc tcagttcaac gagctattcc gaagggacga gaacatggag
     3721 ccgaagaagc cgtttcacga agtcgtggcc gaaaagctga tcgagcagct caaggccggc
     3781 accgcaccgt ggcaaaagcc gtgggagccg ggcgaaccca acgcctacct gccgatgaac
     3841 ccgaccaccg gcaagcggta caaagggatc aacgccatcc acctgatggc ccagggccgc
     3901 agcgatgcgc gctggatgac ctacaagcag gccgccgccg tgggcgcgca ggttcgcaag
     3961 ggcgagaaag gcacgccggt tcaatactgg aagttcagcg aagagcaaga caagctggac
     4021 gacagcggcc ggcccgtcct cgatgcgaag ggccagccgg tcaaggaaac cgtcatgctg
     4081 gagcggccgc gcgtgttctt tgcgaccgtg ttcaacggcg agcagatcga cggcctgccg
     4141 ccgctccagc cgaagaagga acagacttgg aacgccgtcg agcgcgccga gcacatcctg
     4201 aaagcctcgg gcgcgacgat cacccacgcc gccggtgatc gggcgttcta ccgcccttcg
     4261 accgacagca tcaccctgcc ggagcgcggc cagttcccca gctccgaccg ctactacgcg
     4321 accgcgctgc acgagctggg ccactggacg ggccacgctt cgcgccttga ccgcgacctg
     4381 gcgcacccgt tcgggagcga ggggtacgcc aaggaagagc tgcgcgccga aatcgcttcc
     4441 atgatcgtcg gcgacgagct gggcatcggc cacgatccgg gccagcacgc cgcctatgtg
     4501 ggttcgtgga tcaaggcgct gcaagacgag ccgctggagg tgttccgcgc ggccgccgat
     4561 gccgagaaga ttcacgacta cgtgctggcc ttcgagcaga agcaggttca ggagcaagac
     4621 cagcagcaga gccaggccca ggacgaagcc gtggcccagg ccctggccgt ggacattgcc
     4681 gaagtcctgg acaacccgga cgtgtctttc agccactacc aggcattcca gggcgacacc
     4741 ctggaagacg ccttgcgcag ccgtggcctc gaaaccgtgg gcagcatcac cggcaccgat
     4801 cccgagcagt tctacgcggt cgcgcatgac cggctgtcgc cggtgttcgg catcgacccg
     4861 agccacaccg acaccgacaa cgcctacctg gagcgcaagg gcttggcgca agagttcgcc
     4921 aacatggccg aacagctcca cctcgcgcag cagctccagc agcacggcga acagatcgtg
     4981 tcgagcatcg acgccgaagc caggtggagc gacggccagc gcatctttgc gttccacgac
     5041 caggacggtg aaccccacca ggttcgcagc ctggacgagc tgaacaacta cgcgcccgac
     5101 cagttgatgg ccctgccggc gctgacccag cagcaagcgg ccgtcgcaga ccaggaggcg
     5161 aacatgaccc caccgaccaa cgaccaggcg gccgccctgc tggccgccca tcctgccgac
     5221 gcggtgcagg gcatcgagca ggccgccgcc gcgcgccggc agctcgccgc cggcgagatc
     5281 gacggccagg cgttcgccga cgcgacccgt caacaccttg gcgttgagct gccgcccgac
     5341 tggagcggag agctgcgcat cgtcggcgtg gccgagcagg acggccagac cgtcgatgcc
     5401 gcccaggccg gcatcgagcc gcaggcgttc caggtctacg cgcgcaaggc cgatgcgcag
     5461 ttcggcgagg acgcctttgc cttcgtcgcc ggcacccgca ccgagggcca ggccgaggct
     5521 ctgaccgagc gcctgcacct ggtcgatgcg ctgggcaccg acaaccagca cgagcgcgcc
     5581 gccaagctgg cccgcgtgca ggaagagcgt gtacggcgcg accccaacgc gaccgaagag
     5641 gacatttcag ccgctaaaga ggcacgcaag accgccgagg cgtcggccat gctcaacgac
     5701 agcgacgcgc agcgccgcgc ggccgagctg gagcgccagg aacgcgagcg gcagcaggcg
     5761 cagccgcagg ccgagaagcc cgaacggcag tacatcaacg tgccgtacaa ggagaaggac
     5821 gaggccaaga gcctcggggc gcgttgggat cggcagcaac agtcctggta cgtgccgccg
     5881 ggcaccgatg ccgctccctt cgccaaatgg gcgcagggag ccgctacagc ggccgtagag
     5941 ccgcgttcgg cccagccggc acccgaagcc cagggcgagg cgcagaagcc cgcgcagcag
     6001 gcccagcagg cccgccagta cctggccgtg ccctacgagc agcgcaacgc ggccaaggcc
     6061 gccggcgcgc tttgggacaa ggccgcgaag tcctggtatg tcggcccgcg cgccgacgcg
     6121 gcgaagctcg aacgctggaa gcccgagaac gtgcaggccc agcaagggcc agcgatgacg
     6181 ccaagggaag agttcgccga ggccatgcgc agcgccggcc tgttcaccgg cagcaacgcc
     6241 cagggcgatc acccgatcat ggatggcaag cggcaccgcg tgccggtcga gggcggcaag
     6301 aagggcgcgc tcgatggctt ctacgtgggc cacctggacg ggcacccggc cgggcggatc
     6361 atcaacaaca agaccggcac ggacattacc tggaagagca agggctacgc cttgagcgac
     6421 caggagaagg ccaagctcca ggccgaggcg gccgagaagc tggcacagcg agccgtcgag
     6481 caggacaagg cccaggaggc caccgcgcag cgcgtcggtc ggcagatggc cgacctcgtg
     6541 cccatcgagc agccgacgcc ctacctgcaa gccaaaggca tccaggcgca ggccggcgtg
     6601 atgaccgacc gcgaaggcca gaagacctac atcccggcct tcgacgcaga gggcaagcaa
     6661 tggacgatgc aatacatcca ggaggacggc actaagcggt tcgccaagga ctcgaagaag
     6721 gaaggatgct tccacccggt cggcggcatg gacgccctgg cggccgcgcc ggcgctggtg
     6781 atctcggagg gctacgccac ggcggcccag gtggccgagg ccgtgggcca cgccac
//
LOCUS       DATAIQ010000054         2880 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_371547, whole genome shotgun sequence.
ACCESSION   DATAIQ010000054 DATAIQ010000000
VERSION     DATAIQ010000054.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2880)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2880)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2880
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_371547"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..542
                     /locus_tag="VHN20_00825"
     CDS             <1..542
                     /locus_tag="VHN20_00825"
                     /EC_number="5.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018430153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047689 - aspartate racemase activity
                     [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="amino acid racemase"
                     /protein_id="HEX2724342.1"
                     /translation="QHAGDWDGAARLMVDAARRLESGGAEALLICTNTMHRMAQEVEN
                     AVRIPLLHIADATARAIKASRARRPALLATRFTMEQEFYKGRLRDKHGIEVIVPDEPG
                     REVVHRIIYEELCRGEVKERSKAEYLALVGRLRASGADGVVLGCTEITMLIGQSDLDI
                     PVFDTTRIHAEVAMDFALS"
     gene            692..1171
                     /locus_tag="VHN20_00830"
     CDS             692..1171
                     /locus_tag="VHN20_00830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018646397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030551 - cyclic nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HEX2724343.1"
                     /translation="MAVSSPDLKAFLVATPFFGGLSDASLDLLIAMLSERRFAAGATV
                     LTEGEPGRSMYIVHSGELAVSKRAEPGCVVPVTRLGPGDFFGEMTLIEVQNRSATVVA
                     ESPVVLYELTAGNLYAYYKADIHAYAMVMQNINRELCRRLRRADNRLAELQMLHGIQ"
     gene            1292..2698
                     /locus_tag="VHN20_00835"
     CDS             1292..2698
                     /locus_tag="VHN20_00835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003530079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEX2724344.1"
                     /translation="MSEGQALFAVLRQSAAPEAAEAIEHLVEHAPDPELNRINALALA
                     TRLGLDEERLIAAFLHAARVGLFELSWNVLCPGCGGVLDASATLKSFDRDEYGCALCA
                     AGYEPTLDEMIEVTFTVSPRIRRIAAHDPHRLPIWDYCRQIFWSSGVDLPPNFEEIIE
                     DITLDSLELPPGEKAIISLQLPAEFLIVFDPVTHGTQFLDVKGEPTRERQAMTLVFNK
                     VKAPAGKVELRPGPLRITLENRTDARALPAIWVAGDKLHDLLGRRKPFLTAKRLLTNQ
                     TFRDIYGTDTLDVDQRLKITSLTFLFTDLKGSTALYERVGDLVAFDLVRAHFRVLTEI
                     IASEAGAVVKTIGDAVMATFPTPDRALAAALRMRAAMRKLNEERGGDDLLLKIGIHEG
                     PCLAVTLNDRQDYFGQTVNIAARVQNLATSSSIYATGPVIGHPSSSGVLDGAGLKPSA
                     QDAALRGITERVAVYEIP"
     gene            2762..2880
                     /locus_tag="VHN20_00840"
                     /pseudo
     CDS             2762..2880
                     /locus_tag="VHN20_00840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012479022.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="integrase core domain-containing protein"
BASE COUNT          502 a          982 c          917 g          479 t
ORIGIN      
        1 gccagcatgc aggtgactgg gacggcgccg cgcgcctgat ggtcgatgcc gcccgccgtc
       61 tcgaaagcgg aggggccgag gcgcttctga tctgcaccaa cacgatgcac cggatggccc
      121 aggaggtcga gaacgcagtg cgcatcccgc tgctccacat tgccgatgcg acggcccgcg
      181 ccatcaaggc gtctcgggcg cgacgcccgg ccttgctggc gacgcgcttc accatggaac
      241 aggagttcta caagggacgg ctccgcgaca agcacggcat cgaggtcatc gtgccggacg
      301 aacccggccg cgaggtcgtc cacaggatca tctacgagga actttgcaga ggcgaggtga
      361 aggagcgatc caaggctgaa taccttgccc tggtcggccg gcttcgcgca tcgggggccg
      421 acggggtggt gctcgggtgc accgagatca ccatgctgat cggtcaatcg gacctggaca
      481 tcccggtatt cgacacgacc cgcatccacg ccgaggtcgc gatggacttt gcgctgtcct
      541 aggcacgctg cctggttggg acgcagcatt tctcgcgcgg caaggcgcga gggtcgcggc
      601 gcgcgccggt acctgcgaaa aatgttgcgt acacgcgggc ggctcccgaa gatgccgatg
      661 gtcgatttcc gggcgcggga gatattgact gatggctgtc agttcgcccg atctgaaggc
      721 gttcctggtc gctacgccct ttttcggtgg cctctcggac gcaagcctcg acctcctgat
      781 cgcgatgctg tccgagcgcc gcttcgcggc aggtgcgacc gtcctgacag aaggagagcc
      841 ggggcgctcc atgtatatcg tccactccgg cgagctcgcg gtgagcaagc gcgcggagcc
      901 gggctgcgtg gttcccgtta cccgtctcgg gccgggtgat tttttcggtg agatgacgct
      961 catcgaagtg cagaaccgat ccgccaccgt cgtcgccgag agccccgtcg tgctctacga
     1021 gctcacggcc ggaaacctct acgcgtatta caaggccgac atccacgcgt atgcgatggt
     1081 gatgcagaac atcaaccgcg agctctgtcg gcggctccgc cgcgccgaca atcgccttgc
     1141 cgagctgcag atgcttcacg ggattcagtg acgcggactc cgccgtcccc aaagcggccg
     1201 gtgttcgctt gtgcgggaga caggcctgtg cccgcctgtc atgatcttcc aggtctttgc
     1261 acgcgttccc gtcaggccta ctatggccgg catgagcgaa ggccaggctc tcttcgccgt
     1321 tttgcgccaa tccgcggctc ccgaggccgc ggaagccatc gagcatctgg tcgagcacgc
     1381 ccccgacccg gagctcaacc ggatcaatgc tctggcgctc gcgacgcgcc tcggcctcga
     1441 cgaggaacgg ctgatcgcgg ctttcctgca cgcggcccgg gtgggactgt tcgaattgtc
     1501 ctggaacgtc ctgtgccccg gctgcggcgg cgtcctcgac gcgagcgcga cgctcaaatc
     1561 attcgaccgg gacgaatacg gatgcgccct gtgcgcggcc ggctacgagc cgacgctgga
     1621 cgaaatgatc gaggtcacgt tcaccgtgag cccgcgcatc cgcaggatcg cggcgcatga
     1681 cccgcaccgg cttccgatct gggactattg ccggcagata ttctggagct ccggcgtcga
     1741 cctgcctccg aatttcgagg agatcatcga ggacatcacc ctcgattccc tcgagcttcc
     1801 gccgggcgag aaggcgatca tctccctgca gcttccggcc gagttcctga tcgtcttcga
     1861 cccggtgacg cacggcacgc agttcctcga cgtcaagggc gagccgaccc gcgagcggca
     1921 ggcaatgacg ctcgtgttca acaaggtgaa agcgccggcg gggaaagtgg agctgcggcc
     1981 ggggccgctg cgcatcacgc tcgagaaccg gacggacgcc cgggccctgc cggcgatctg
     2041 ggtggccggg gacaagctcc acgacctgct tggccggcgc aagccgttcc tcacggccaa
     2101 gcggctgctc accaaccaga ccttcaggga catctacggc accgacacgt tggacgtcga
     2161 ccagcgcctg aagatcacga gcctgacctt cctgttcacg gacctcaagg gctcgacggc
     2221 gctctacgag cgcgtcggcg acctcgtcgc gttcgacctc gtgagagccc acttccgcgt
     2281 gctgaccgag atcatcgcct ccgaggccgg tgccgtcgtc aagacgatcg gcgacgccgt
     2341 catggcgacg ttccccaccc cggaccgggc gctcgcggcg gcgctgcgga tgcgcgccgc
     2401 catgcgcaag ctcaacgagg agcgcggcgg cgacgacctc ctcctgaaga tcggcatcca
     2461 cgagggcccg tgcctcgccg tgacgctgaa cgaccgccag gactacttcg ggcagacggt
     2521 gaacatcgcc gcgcgtgtcc agaatctcgc cacttcctcg tccatctacg ccacaggccc
     2581 ggtgatcggc caccccagtt cctcgggcgt gctcgacggc gccggcctga agccttccgc
     2641 gcaggacgcc gcgttgcgcg ggatcacgga acgcgtcgcc gtctacgaga tcccttagcc
     2701 cggcgctggc gccgcaaagt ccttcgcttg tgccattaga gcgggatcaa ttcagattga
     2761 atccatcaag ctcaaacacg tcaggaccag accctacacg ccaaaaacca acggcaaggc
     2821 cgaacgcttc atccagaccg cgctcaggga atgggcctat gcacgcgcct acaacagctc
//
LOCUS       DATAIQ010000055         2795 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_417879, whole genome shotgun sequence.
ACCESSION   DATAIQ010000055 DATAIQ010000000
VERSION     DATAIQ010000055.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2795)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2795)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2795
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_417879"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..732)
                     /locus_tag="VHN20_00845"
     CDS             complement(<1..732)
                     /locus_tag="VHN20_00845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019403769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX2724345.1"
                     /translation="MLATPETQNGLPDMKVSVRQVFGIDSDLEVPAYSQPEEHVPELD
                     PDYIFDRETTLAILAGFARNRRVMITGYHGTGKSTHVEQVAARLNWPCVRVNLDSHVS
                     RIDLVGKDAIVLQEGKQVTEFRDGILPWALQNNIALCFDEYDAGRPDVMFVIQRVLEL
                     SGKLTLLDQRRVIRPHPAFRMFATANTIGLGDTSGLYHGTQQINQGQMDRWSIVTTLN
                     YLPHDKEVDIVLSKATHYRTPEGRDI"
     gene            complement(929..1564)
                     /locus_tag="VHN20_00850"
     CDS             complement(929..1564)
                     /locus_tag="VHN20_00850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015823431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HEX2724346.1"
                     /translation="MDLNSPLFDRIRIRPSCDEPRPTQDPSCERPGCTAAGPFRAPKG
                     RGQEGKYWRFCLDHVREYNHSYNYFAGMSDAAVAAYQKDAVIGHRPTWTMGANASGRA
                     AGAPGAGGDADAPVRDWEYADPLGVLRSAGVEQKARAAEPKRPRYSGPVRHALDVMGL
                     DETATPASIKAQYKALVKRFHPDAHGGDRGFEERLRDIIKAHDTLKAAGLC"
     gene            1647..1916
                     /locus_tag="VHN20_00855"
     CDS             1647..1916
                     /locus_tag="VHN20_00855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019403767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family protein"
                     /protein_id="HEX2724347.1"
                     /translation="MTMKELITRRLNERLAPTHLQVEDESHQHIGHAGWRAGGETHFR
                     LDIVSDAFEGKSRVERHRLVNAALTEAFTAGLHALAITTRAPGER"
     gene            complement(1952..>2795)
                     /locus_tag="VHN20_00860"
     CDS             complement(1952..>2795)
                     /locus_tag="VHN20_00860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724348.1"
                     /translation="MEAALTRHGLKPFWYLTTTFRVEDKTVSMGGNAPGISRNHFGLT
                     GAVSFLIETRGVGVRMEGFQRRVATHYVAAKAVLETAAAEAPRLRMAVMQARQAIADA
                     RDELVVGHRIATVKMTLPMVDPETAADKPVEVDFRDSRKITVTATRPRPAGYVVAPEG
                     AAAVEALRIKGVIVCKLGGSEPIDVEAFHVESRAGQVTRDQRESINPERAVNVTLEPR
                     KLGAAPGSVFIPMGQPAAAIIAATLEPDSPGSHVGSGMTPVLAGGEAPIYRVPAGTRA
                     AKGC"
BASE COUNT          410 a          922 c         1015 g          448 t
ORIGIN      
        1 gatgtcgcgc ccctccggcg tgcggtagtg cgtcgccttg gagagaacga tgtcgacctc
       61 cttgtcgtgc ggcaggtagt tgagcgtggt cacgatcgac cagcggtcca tctggccctg
      121 gttgatctgc tgcgtgccgt gatagaggcc cgacgtgtcg ccgaggccga tggtgttggc
      181 ggtcgcgaac atgcggaagg ccggatgcgg gcggatgacg cggcgctggt cgagcagcgt
      241 gagcttgccc gagagctcga gcacgcgctg gatcacgaac atcacgtcgg ggcggccggc
      301 gtcgtattcg tcgaaacaca gggcgatgtt gttctgcagc gcccacggca ggatgccgtc
      361 gcggaactcg gtgacctgct tgccttcctg cagcacgatc gcgtccttgc cgacgagatc
      421 gatgcgcgac acgtggctgt cgaggttgac gcgcacgcac ggccagttga ggcgcgccgc
      481 gacctgctcg acatgggtcg acttgccggt gccgtgatag cccgtgatca tgacgcggcg
      541 gttcctggcg aagccggcca ggatggcgag cgtggtctcg cggtcgaaga tgtaatcggg
      601 gtcgagctcc gggacgtgct cctcgggctg cgaataggca ggaacctcga ggtccgaatc
      661 gatgccgaag acctggcgca cggacacctt catgtccggc aggccattct gggtctcggg
      721 tgttgcgagc atggaatcct cttcaaacca agatgagcgc tctcggccgg ggcgggcgcc
      781 cgcatgtcta gccgcgcttg ggcggcgggg caatttccca gagcgggatg ccgccgccct
      841 gctctcgtcc tccttgcagg cgccggcgcc gctcctggcg cgccgggtca tgctcccgga
      901 ggtctaacgc cgcccccgcc ggggcagttc agcacaggcc cgcggctttt agcgtgtcgt
      961 gcgccttgat gatgtcgcgc aggcgctcct cgaagccccg gtcgccgcca tgggcatcgg
     1021 gatggaagcg tttcacgagg gccttgtact gggccttgat ggaggccggg gtggcggtct
     1081 cgtcgaggcc catcacgtcg agggcgtggc ggaccgggcc ggaatagcgc ggccgcttcg
     1141 gctccgccgc ccgggccttc tgctcgacgc ccgccgagcg caggacgccg agcgggtcgg
     1201 catattccca gtcgcgcacc ggcgcgtcgg cgtcgccgcc ggccccgggg gccccggcgg
     1261 cgcggccgga cgcgttggcg cccatcgtcc aggtcggcct gtggccgatc accgcgtcct
     1321 tctggtaggc cgccacggcg gcgtcgctca tgcccgcgaa gtagttgtag gaatggttgt
     1381 attcgcgcac gtgatcgagg cagaagcgcc agtatttccc ctcctgcccg cggcccttgg
     1441 gcgcgcggaa gggcccggcc gcggtgcagc ccgggcgctc gcaggaggga tcctgcgtgg
     1501 ggcgcggctc gtcgcaggac ggccggatgc ggatgcgatc gaagagcggc gaattgagat
     1561 ccatgacggg ctgattatga agcgtcctga ggcaggggca aggcctcgcg gagcatgccc
     1621 catgcgtagc gatagaaagt tagcgaatga cgatgaagga actgatcacg cggcggctca
     1681 acgagcgcct cgcgcccacg cacctccagg tcgaagatga gtcgcaccag catatcgggc
     1741 atgccggctg gcgcgcaggc ggcgaaactc actttcgact ggatatcgtg tccgatgcct
     1801 tcgaaggcaa gagccgcgtc gagcgtcacc gcctcgtcaa cgcggcgctg acggaagcgt
     1861 tcacggcggg cctgcacgcc ctcgccatca ccacaagagc gccaggggag cgctgataca
     1921 cctctccccg caagcgggga gaggcgaagc gtcagcagcc cttggcggcg cgggtgccgg
     1981 cggggacgcg gtagatcggc gcctcgccgc cggcgaggac cggggtcatg ccgctgccga
     2041 cgtggctgcc gggcgaatcg ggctcgagcg tcgcggcgat gatcgccgcc gccggctggc
     2101 ccatcgggat gaacacgctg cccggcgccg cgccgagctt gcgcggctcc agcgtgacgt
     2161 tgacggcccg ctccggattg atgctctcgc gctggtcgcg cgtgacctgg ccggcgcggc
     2221 tctcgacgtg gaaggcctcg acgtcgatcg gctcgctgcc gccaagcttg cacacgatca
     2281 cgcctttgat gcgcagcgcc tcgacggcgg cggcgccttc cggcgcgacg acgtagccgg
     2341 ccggccgcgg ccgcgtcgcc gtgacggtga tcttgcgcga gtcgcggaaa tcgacctcga
     2401 ccggcttgtc ggcggcggtc tcgggatcga ccatcggcag cgtcatcttc acggtggcga
     2461 tgcggtggcc gacgacgagt tcgtcgcgcg cgtcggcgat ggcttgccgc gcctgcatga
     2521 cagccatgcg caggcgcggg gcctccgccg ccgcggtctc gagcaccgcc ttggcggcaa
     2581 cgtaatgcgt ggcgacgcgg cgctgaaaac cttccatgcg gacgccgacg ccgcgcgtct
     2641 cgatcaggaa cgagacggcg ccggtcaggc caaaatggtt gcgcgagata ccgggcgcgt
     2701 tgccgcccat cgacacggtc ttgtcctcga cccggaaggt cgtcgtcaga taccagaacg
     2761 gcttcagacc gtgccgcgtc agggccgcct ccatg
//
LOCUS       DATAIQ010000056         2778 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_279519, whole genome shotgun sequence.
ACCESSION   DATAIQ010000056 DATAIQ010000000
VERSION     DATAIQ010000056.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2778)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2778)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2778
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_279519"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1375
                     /gene="aspS"
                     /locus_tag="VHN20_00865"
     CDS             <1..1375
                     /gene="aspS"
                     /locus_tag="VHN20_00865"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015928836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HEX2724349.1"
                     /translation="EVIDSIRSRMKAQGFFEFQTPILTASSPEGARDFLVPSRLHPGK
                     FYALPQAPQQFKQLIMIAGFDRYFQIAPCFRDEDARADRSPGEFYQLDIEMSFVTQED
                     VFQAVEPVLRGLFEEFADGKPVTRTFPRIPYAEAMLKYGTDKPDLRNPLVIADVTAEF
                     ARDEVTFNAFKNVIKAGGVVRAIPATGAGSQPRSFFDKLNDWARGEGAPGLGYVVFES
                     EGGALSGKGPIAKFIPPEVQAAIAAKAGVGPGDAVFFSAGDAAKAATLAGKARVRIGD
                     ELKLGDQNQFAFCWITDFPMYEWNEDEKRIDFSHNPFSMPNYEHDAFMALDPGDRDRI
                     LGITAFQYDVVCNGIELSSGAIRNHRPDIMEKAFAIAGYDRQVLEQKFGGMLRALECG
                     APPHGGIAPGVDRMVMLLCGEQNLREVVLFPMNQRAEDLLMGAPSEVSPKQLRELHIR
                     LNLPEKS"
     gene            1447..2697
                     /locus_tag="VHN20_00870"
     CDS             1447..2697
                     /locus_tag="VHN20_00870"
                     /inference="COORDINATES: protein motif:HMM:NF016800.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase family protein"
                     /protein_id="HEX2724350.1"
                     /translation="MAIPLSFRAPQDDRRRAAFYAWMAALVILAQLPLVMAIGHRSGP
                     LVVTLAFAAVMVAAVLDGSLAGIVASAGRALASPLGLAAMAFFAWAAVSITWSDVPDT
                     SLAAMAEFGLTVGGVVILALALPRRMSREYGHLVLAGAVAGACVVILIDLWSGLLMRR
                     VLAVQSDPFIFNRPVVTVLTVSLPVILLLLKRQQNWLAAALAALVVVTILQSESGAAM
                     LGLIAGAAAYAVTRLSRRLALALAGIGLVAAVVSAPMIGDIAGRALPPTLHEKLAGSH
                     SVERIEIWKLFGTAVRHEPVIGLGFGASPRFPETHVAERMRAENPDLPPAWHPHNAAL
                     QVWVELGAVGAVLGTLVMLLLLRRFAGLPRSLLTHSMAVLAAVVAISLVGHGAWQGWW
                     PAAIGAAIVWLQAAEDIDAPRETG"
BASE COUNT          405 a          959 c          943 g          471 t
ORIGIN      
        1 cgaggtcatc gactcgatcc gtagccgcat gaaggcacag ggctttttcg agttccagac
       61 gccgatcctg accgcctcca gccccgaggg cgcgcgcgat ttcctggtcc cctcgcggct
      121 ccatccgggc aagttctacg cgctgccgca ggccccgcag cagttcaagc agctgatcat
      181 gatcgcgggg ttcgaccgct atttccagat cgcaccctgc ttccgcgacg aggacgcccg
      241 tgccgaccgc tcgcccggcg agttctacca gctcgacatc gagatgagct tcgtcaccca
      301 ggaggacgtg ttccaggcgg tcgagccggt tctgcgcggc ctgttcgagg agttcgccga
      361 cggcaagccg gtgacgcgga cgttcccgcg cattccctat gccgaggcga tgctcaaata
      421 cggcaccgac aagcccgacc tgcgcaaccc gctcgtgatc gccgacgtga ccgccgagtt
      481 cgcgcgcgac gaggtgacgt tcaacgcctt caagaacgtc atcaaggcgg gcggcgtcgt
      541 gcgcgccatc cccgccaccg gggcgggcag ccagccgcgc tcgttcttcg acaagctcaa
      601 cgactgggcg cgcggggagg gggctccggg cctcggctac gtcgtcttcg aaagcgaagg
      661 cggcgcgctg tcgggcaagg gcccgatcgc caagttcatt ccgcccgagg ttcaggccgc
      721 catcgccgcc aaggccgggg tcgggccggg ggacgcggtg ttcttctccg ccggagacgc
      781 cgccaaggcg gcgacgctcg ccggcaaggc gcgcgtgcgc atcggcgacg agctgaagct
      841 cggcgaccag aaccagttcg cgttctgctg gatcaccgac ttcccgatgt atgaatggaa
      901 cgaggacgag aagcgcatcg atttttcgca caacccgttc tcgatgccga actatgagca
      961 cgacgccttc atggcgctgg atccgggcga ccgcgacagg atcctcggca tcacggcctt
     1021 ccagtacgat gtcgtctgca acggcatcga gctgtcgtcg ggcgcgatcc gtaaccaccg
     1081 gccggacatc atggagaaag ccttcgccat cgccggctac gaccggcagg tgctcgagca
     1141 gaagttcggc ggcatgctgc gggccctgga atgtggcgcg ccgccgcacg gcggcatcgc
     1201 gccgggcgtc gatcgcatgg tgatgctgtt gtgcggcgag cagaacctgc gcgaagtggt
     1261 gctattcccg atgaaccaga gggccgagga cctgctgatg ggcgccccgt ccgaggtctc
     1321 gcccaagcag ttgcgcgagc tccatatccg cctgaacctg ccggaaaaat catagcgcct
     1381 tgtccggcga agcggcgccc gcttcgccgg gccatggtct aaccttcggt gaagccggca
     1441 tcgagaatgg ccattccgct cagcttccgc gcgcctcaag acgaccgccg ccgggccgcc
     1501 ttctacgcat ggatggcggc gctcgtgatc ctggcgcagc tgccgctggt catggccatc
     1561 gggcatcgct ccggcccgct cgtggtcaca ctcgccttcg cggccgtgat ggtcgcggct
     1621 gtgctggacg ggtccctggc cggcatcgtt gcaagcgccg gccgcgcgct cgcctccccc
     1681 ctcggtctcg ccgccatggc gttcttcgct tgggccgccg tctcgatcac gtggagcgac
     1741 gtgcccgaca cctcgctcgc cgccatggcc gagttcggac tcacggtcgg cggcgtcgtc
     1801 atcctcgcgc ttgccctgcc gcgacggatg tcgcgcgagt acgggcacct ggttctcgcc
     1861 ggggcagtcg cgggcgcctg cgtcgtcatc ctgatcgatc tgtggagcgg gcttctgatg
     1921 cgccgcgtcc tggccgtgca gtcggaccct ttcatcttca accgcccggt cgtgacggtt
     1981 ctgacggtct cgcttccggt catcctgctg ctgctcaagc ggcagcagaa ttggctggcc
     2041 gcggcgctgg cagcgctcgt ggtcgtgacc atcctgcagt cggaaagcgg cgcggcgatg
     2101 ctcggcctga tcgccggcgc cgccgcctac gcggtcacgc gcctgtcgcg ccggctcgcc
     2161 ctggcgctgg cggggatcgg gctggtcgcc gccgtggtgt cggcgccgat gatcggggac
     2221 atcgccggcc gcgccctgcc gcccacgctg cacgagaagc tcgccggcag ccattccgtc
     2281 gagcgcatcg agatctggaa gctgttcggg accgcggtcc ggcacgaacc cgtcatcggg
     2341 ctcggattcg gcgccagtcc gcggtttccc gaaacccatg tggcggagcg gatgcgcgcg
     2401 gaaaatccgg acctgccgcc ggcgtggcat ccgcacaatg cggcgctgca ggtctgggtg
     2461 gagctcggcg cggtcggcgc tgtcctcggc accctggtca tgctgctgct cctcaggcgc
     2521 tttgcaggct tgccgcggtc gctgctcacg cacagcatgg ccgtcctggc ggcggtcgtc
     2581 gcgatctcgc tggtcggcca cggggcctgg cagggctggt ggccggcggc gatcggcgcg
     2641 gccatcgtgt ggttgcaggc cgcggaagac attgacgcgc cccgtgagac cggatgacaa
     2701 cttgagcagc gtgagaaaac cgtcgggagg ctcgatgagc gaacgctcgg atacagaggt
     2761 gtcgcaggac ctcaaatc
//
LOCUS       DATAIQ010000057         4772 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_324310, whole genome shotgun sequence.
ACCESSION   DATAIQ010000057 DATAIQ010000000
VERSION     DATAIQ010000057.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4772)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4772)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4772
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_324310"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            192..2171
                     /locus_tag="VHN20_00875"
     CDS             192..2171
                     /locus_tag="VHN20_00875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEX2724351.1"
                     /translation="MVTTAPAAREDTFPKLLARNARVRPRRPAFRHKDLGIWQSWTWA
                     EVHEIVRAYAVGMKALGVGRGSKIAVIGYNRPRLYWTMAAAQCLGAVPVPVYADSVAD
                     EMAYVLAHAEVTHAAVQDQEQVDKLLAVAAQLPTLGHILYDEERGLRDYDHGRLRPIA
                     EVIAEGRQRLAADAAATPMIDAEIESGIGADLAIILYTSGTTGRPKGVMLSYDNVIKA
                     AEIGCAFDRLSEEDEIIAYLPIAWVGDHIFSYAQAIVAGLCVNCPENPETVIQDRREI
                     GTTYAFAPPRVYETVLTLTMVRMEDASAIKRRIFRFFIAHANEVGEPILNGERVGAWK
                     RLLYRLGDILVYAPLRNRFGLTNIKVGYTAGEAIGPEIFRFYRAIGVNLKQLYGQTEA
                     AVYITMQPDGEIRADTVGRPAPQVEIRIDDNGEVLYRSPGVFLGYYKEPEKTAETKLP
                     DGFVRSGDAGFFDSTGHLKIIDRAKDVGRMRDGALFPPKYVENKLKFYPNIKEAVAFG
                     AGRDCVACFINIDLVAVGSWAERNKVTYASYQELAAHPLVYDMIAQHVDEVNRSLAGE
                     PGMGGAQIRRFLILHKELDADDGELTRTQKVRRSFIAERYAPLIRALYDGSRDADIAT
                     EVTFEDGRKGVIAARVGIRDARTYPVAAPKLEKAA"
     gene            2168..2968
                     /locus_tag="VHN20_00880"
     CDS             2168..2968
                     /locus_tag="VHN20_00880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2724352.1"
                     /translation="MRAPDGPLVVKGDALLAVENVSLRFGGLKALSDVSFDIRKGEIR
                     AIIGPNGAGKTSMLNCINGFYHPSDGCITFKGVRRPRMRPSRAARGGIARTFQNVALF
                     RGMTTLDNIMAGRSLKMRRGFLWQLLRHGPALREEIEHRRAVEEIIDFLEIQHIRKVP
                     VGKLPYGLQKRVELGRALAMAPELLLLDEPMAGMNLEEKEDMCRFILDVNREFGTTIA
                     LIEHDMGVVMDLSDRVVVLDYGRKIADGVPDEVRRDERVIAAYLGVAH"
     gene            3021..3935
                     /locus_tag="VHN20_00885"
     CDS             3021..3935
                     /locus_tag="VHN20_00885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006932252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX2724353.1"
                     /translation="MGQAPDLLLQTLWEGFVSGVLYALIALGFVLIFKASGVFNFAQG
                     IMVVFAALTLVGLYEKGVPALLALVLTIAVMLVLAVAVERLVLRPLVNQPDIILFMAT
                     FGLTYLLIGLGELIFGGNPKQMIARELHLPQGATDVTMFGGPVRFQHIDIAAAVIASL
                     MIATLAVFFSRTRIGRALRAVADSHKAALSVGISLNQIWTIVWFTAGIVALVTGIMWG
                     ARSDVSFALQIIALKALPVLILGGFTSIPGAIVGGLIIGLGEKIGEFYWGPLLGGGIE
                     TWLAYVIALLFLLVRPEGLFGEKIIERI"
     gene            3938..>4772
                     /locus_tag="VHN20_00890"
     CDS             3938..>4772
                     /locus_tag="VHN20_00890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009467584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX2724354.1"
                     /translation="MLYREAGQYKTSYAADMAVFPLREDRIGLGLVIALAYALAVIGN
                     DFLLQAVLIPFLIFSLAAIGLNLLTGYAGLLSLGTGAFMGVGAYACYKLMTAFPEVNV
                     IAWILVSGLFSAGVGVLFGLPSLRIKGFYLAVATLAAQFFLQWCFNRVPWLTNYSVSG
                     AIEAPLRTVLGIPVTGPTATPQTRYLVVLTLVILLTWVASNLVHGRIGRMWMAIRDMD
                     IAAELIGIRLLPSKLLAFAVSSYYCGVAGALMVFLWYGGAEDNVFDINQSFFILFMVI
                     IG"
BASE COUNT          746 a         1624 c         1577 g          825 t
ORIGIN      
        1 aaggagggca tgcaggcctt cgtcgagaag cggccgccgc ggttccggaa cggctgaacg
       61 gagggggggc ggagcgccat actaaaagcg taagccggcc tgctcgcgct cgccggacga
      121 gtatgccaga ctttgccgca gagccgcgcg accctcgcgg ggagcgatgc gttgcttagg
      181 ggagggcgaa ggtggtgacc acggcgccgg ccgcgcgtga ggacaccttt ccgaaactgc
      241 tcgcgcgcaa cgcgcgcgtg cgcccgcgcc ggcccgcatt ccggcacaag gatctcggca
      301 tctggcagtc gtggacgtgg gccgaggtgc acgagatcgt ccgcgcctac gccgtcggca
      361 tgaaggcgct cggcgtcggc cgcggcagca agatcgcggt gatcggctac aaccggccgc
      421 ggctttactg gacgatggcg gccgcgcaat gcctcggcgc cgtgccggtg ccggtctacg
      481 cggactcggt ggccgacgag atggcctacg tgctggcgca cgcggaggtg acgcacgccg
      541 ccgtccagga ccaggagcag gtcgacaagc tgctcgcggt cgccgcgcag ctgccgacgc
      601 tcgggcacat cctctacgac gaggagcgcg gcctgcgcga ttacgaccac ggccgattgc
      661 ggccgatcgc cgaggtcatc gccgaggggc gccagcggct cgcggcggat gccgcggcca
      721 cccccatgat cgacgccgag atcgagtcgg gcatcggcgc cgacctcgcc atcatccttt
      781 acacgtccgg caccaccggg cgcccgaaag gcgtgatgct gagctacgac aacgtcatca
      841 aggcggccga aatcggctgc gcgttcgacc ggctctcgga agaggacgag atcatcgcct
      901 atctgccgat cgcctgggtc ggcgatcaca tcttctcgta tgcgcaggcg atcgtggcgg
      961 ggctgtgcgt caactgcccg gaaaatcccg agacggtgat ccaggaccgg cgcgagatcg
     1021 gcaccaccta cgccttcgcc ccgccgcgcg tctacgagac cgtgctcacg ctcaccatgg
     1081 tgcgcatgga agacgcgagc gcgatcaagc ggcggatctt ccggttcttc atcgcccatg
     1141 ccaacgaggt cggcgagccg atcctcaacg gcgagcgcgt cggcgcctgg aagcggctgc
     1201 tctaccggct cggcgatatc ctggtctacg cgccgctgcg caaccggttc gggctcacca
     1261 acatcaaggt cggctacacg gccggggaag cgatcgggcc ggagatcttc cggttctacc
     1321 gcgccatcgg cgtcaacctg aagcagctct acgggcagac ggaagcggcc gtctacatca
     1381 cgatgcagcc ggacggcgag atccgcgccg acacggtcgg ccggccggcg ccgcaggtcg
     1441 agatcaggat cgacgacaac ggcgaggtgc tctatcgctc gcccggcgtg ttcctcggct
     1501 actacaagga gccggagaag accgccgaga ccaagctgcc cgacggcttc gtgcgctcgg
     1561 gcgatgccgg cttcttcgac tcgaccggcc acctcaagat catcgatcgc gccaaggacg
     1621 tcggccggat gcgcgacggc gcgctgttcc cgccgaaata cgtcgagaac aagctcaagt
     1681 tctaccccaa catcaaggag gcggtggcgt tcggggccgg ccgcgactgc gtcgcatgct
     1741 tcatcaacat cgatctcgtc gcggtcggca gctgggccga gcgcaacaag gtgacttacg
     1801 cctcgtatca ggagctggct gcgcacccgc tggtctacga catgatcgcg cagcacgtcg
     1861 acgaggtgaa ccggtcgctg gccggcgagc cgggcatggg cggcgcccag attcgccgct
     1921 tcctgatcct gcacaaggag ctcgatgccg acgacggcga actgacgcgc acgcaaaaag
     1981 tccggcgcag cttcatcgcc gagcgctacg cgccgctgat cagggcgctc tacgacggtt
     2041 cgcgtgacgc cgacatcgcc acggaggtga cgttcgagga cggccgcaaa ggcgtgatcg
     2101 cggcacgcgt cgggatccgc gacgcgcgga catatcccgt ggccgcgccg aagctggaga
     2161 aagcggcgtg agggcgccgg acgggccgct cgtcgtcaag ggcgacgcgc tcctcgcggt
     2221 cgagaacgtg tcgctgcgct tcggcgggct caaggccttg tccgatgtct ccttcgacat
     2281 caggaagggc gagatccgcg ccatcatcgg ccccaacggc gccggcaaga cctcgatgct
     2341 caactgtatc aacggcttct accatccgag cgacggctgc atcacgttca agggcgtgcg
     2401 ccggccgagg atgcggccgt cgcgcgcggc gcggggcggc atcgcgcgca ccttccagaa
     2461 cgtcgccctg ttccgcggca tgacgaccct cgacaacatc atggccggac gcagcctcaa
     2521 gatgcggcgc ggcttcctct ggcagctgct gcgccatggc ccggcgttgc gcgaggagat
     2581 cgagcaccgg cgcgccgtcg aggagatcat cgatttcctc gagatccagc acatccgcaa
     2641 agtgccggtc ggcaagctgc cctacggcct gcagaagcgc gtcgagctcg ggcgcgcgct
     2701 ggcgatggcg ccggagctgc tcctcctcga cgagccgatg gccggtatga acctcgagga
     2761 gaaagaggac atgtgccgct tcatcctcga cgtgaaccgc gagttcggca cgaccatcgc
     2821 cctgatcgag cacgacatgg gcgtcgtcat ggatctgtcc gatcgcgtcg tcgtcctcga
     2881 ctacggccgc aagatcgccg acggggtgcc ggacgaggtg cggcgcgacg agcgcgtgat
     2941 cgccgcctat ctcggcgtcg cgcattgagg cgcccttgct cgacctgctc tacaagatcc
     3001 tgatcgaccc cttcgtgctg atggggcagg cgcccgatct cctgctgcag acgctgtggg
     3061 agggcttcgt ctcgggcgtt ctctacgcgc tcatcgccct cggtttcgtg ctgatcttca
     3121 aggcttcggg cgtgttcaac ttcgcgcaag gcatcatggt ggtgttcgcg gccctcacgc
     3181 tggtcggcct ctacgagaag ggcgtgccgg cgctcctggc gctcgtgctg accattgccg
     3241 tgatgctcgt gctggcggtc gccgtcgagc ggctcgtcct gcggcccctc gtcaaccagc
     3301 ccgacatcat cctgttcatg gcgaccttcg ggctcaccta tctcttgatc ggtctcggcg
     3361 agctgatctt cggcggcaac ccgaagcaga tgatcgcccg cgaattgcac ctgccgcagg
     3421 gcgccaccga cgtgaccatg ttcgggggcc ccgtccgttt ccagcacatc gacatcgccg
     3481 ctgccgtcat cgcctcgctg atgatcgcga ccctggcggt gtttttctcg cgcacgcgga
     3541 tcggccgggc gttgcgtgcc gtcgccgaca gccacaaggc ggcgctttcg gtcggcatct
     3601 cgctcaacca gatctggacg atcgtctggt tcacggccgg gattgtcgcg ctcgtcaccg
     3661 gcatcatgtg gggcgcccgc tccgacgtct ccttcgcgtt gcagatcatc gccctgaagg
     3721 cgctgccggt gctgatcctc ggcggcttca cgtcgatccc cggcgccatc gtcggcggcc
     3781 tcatcatcgg cctcggcgag aagatcggcg aattctactg gggcccgctc ctcggcggcg
     3841 gcatcgagac ctggctcgcc tacgtgatcg ccctgctatt cctgctggtc aggccggaag
     3901 gcctgttcgg cgagaagatc atcgagcgga tctgaccatg ctctatcgcg aggccgggca
     3961 atacaagacg agctacgcgg ccgacatggc ggtgttcccg ctgcgcgagg accgcatcgg
     4021 cctcggcctc gtgatcgcgc tcgcctacgc gctggctgtc atcggcaacg atttcctgct
     4081 gcaggccgtg ctgatcccgt tcctgatctt ctcgctggcg gcgatcggcc tcaacctgct
     4141 gaccgggtat gcggggctgc tctcgctcgg caccggcgcc ttcatggggg tcggcgccta
     4201 cgcctgctac aagctgatga ccgccttccc tgaggtcaac gtcatcgcct ggatcctggt
     4261 ctccggcctg ttctcggccg gcgtcggcgt gctgttcggc ctgcccagcc tgcgcatcaa
     4321 gggcttctat ctggcggtgg cgaccctggc ggcgcagttc ttcctgcaat ggtgcttcaa
     4381 ccgggtgccg tggctcacga actacagcgt ctccggggcc atcgaggcgc ccctgcgcac
     4441 ggttctgggc attcccgtca cggggccaac ggcgaccccg cagacccgct acctcgtcgt
     4501 cctgacgctc gtcatcctgc tcacctgggt tgcttcgaac ctcgtgcacg gccgcatcgg
     4561 gcgcatgtgg atggccatcc gcgacatgga catcgccgcc gagctgatcg gcatcaggct
     4621 gctgccgtcc aagcttctgg ccttcgcggt gtcgtcgtat tactgcgggg ttgcgggggc
     4681 gctcatggtg ttcctctggt acggcggcgc cgaagacaac gttttcgaca tcaaccagtc
     4741 gtttttcatc ctgttcatgg tcattatcgg gg
//
LOCUS       DATAIQ010000058         1641 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_2732, whole genome shotgun sequence.
ACCESSION   DATAIQ010000058 DATAIQ010000000
VERSION     DATAIQ010000058.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1641)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1641)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1641
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2732"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..422)
                     /locus_tag="VHN20_00895"
     CDS             complement(<1..422)
                     /locus_tag="VHN20_00895"
                     /inference="COORDINATES: protein motif:HMM:NF013324.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="paraslipin"
                     /protein_id="HEX2724355.1"
                     /translation="MDFGLIVVVALAFFVIIVLAKTAVVVPQQSAYVIERLGKFSGTL
                     GAGFHILIPFFDVIRYKHSLKEIAIDIPAQVCITRDNVQVAVDGVLYLKVLNPERASY
                     GITDYVFAIIQLAQTTLRSEVGKIELDRTFEERTNINIA"
     gene            complement(442..870)
                     /locus_tag="VHN20_00900"
     CDS             complement(442..870)
                     /locus_tag="VHN20_00900"
                     /inference="COORDINATES: protein motif:HMM:NF014062.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NfeD family protein"
                     /protein_id="HEX2724356.1"
                     /translation="MTWWIWLLVGLLFLLVELITPGGFYMLFFGAAALLIGALTGLGL
                     AGPGWMQWLLFSIIGVLSLVFFRGPLIARARLRSADHDVDSLVGETAVAMSDIAADGI
                     GKAELRGTSWAARNVGSSIVLSGQRCKVENVDGLMLWIRG"
     gene            complement(949..>1641)
                     /locus_tag="VHN20_00905"
     CDS             complement(949..>1641)
                     /locus_tag="VHN20_00905"
                     /inference="COORDINATES: protein motif:HMM:TIGR03437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724357.1"
                     /translation="TNAATALTGAVAPGEVVTIYGTGIGPAQLVTFELTTDRFAIRNQ
                     LAGTRVLFDGFPAPILYTRADQVSAIVPFQVAGRTVTELRVEYQGQTTPRVELPVLPA
                     SPGLFTSSYSGSGQGAILNQDYWLNSAAAPAARGSVVMLYGTGAGQFQAPLGAEELAR
                     SAAALERPVVVRIGGEEAEVLYAGTAPGLPAGVVQINARVPAGISPGGAVPVWFAVDG
                     RPSRVDVTLAVR"
BASE COUNT          298 a          547 c          544 g          252 t
ORIGIN      
        1 gcgatgttga tgttggtccg ctcctcgaac gtgcggtcga gctcgatttt gccgacctcg
       61 ctgcgcagcg tcgtttgggc aagctggatg atggcgaaga cgtagtcggt gatgccgtac
      121 gaggcgcgct ccggattcag caccttgagg tagaggacgc cgtcgaccgc cacctgcacg
      181 ttgtcgcgcg tgatgcagac ctgcgcgggg atatcgatgg cgatctcctt gagcgagtgc
      241 ttgtaacgga tcacgtcgaa gaacgggatg aggatgtgaa agccggcgcc gagcgtgccg
      301 ctgaacttac cgagccgctc gatgacgtac gcgctctgct gcggcacaac gaccgccgtc
      361 ttggcgagca cgatgatgac gaagaacgcg agtgcgacga ctacgatcag gccaaagtcc
      421 attgactcct ccgtggcggc ctcagccgcg aatccaaagc atcaacccgt cgacattctc
      481 gaccttgcag cgctgcccgc tgagcacgat gctgctgccc acgttgcgcg ccgcccacga
      541 agtgccgcgc aactccgcct tcccgatccc atcggcggca atgtcggaca tggccaccgc
      601 cgtttcgccg accaggctgt cgacgtcgtg atcggcgctg cgcaggcggg cgcgcgcgat
      661 cagcggcccg cggaagaaga cgagcgacag cacgccgatg atcgagaaca gcagccactg
      721 catccatccg ggtccggcga gcccgagtcc ggtgagtgcg ccgatgagca gcgccgccgc
      781 tccgaagaac aacatgtaga agccgccggg agtaatcagc tccacgagca ggaacagcaa
      841 tccgacgagc agccagatcc accaggtcat gccaagctcc tccaccggcg gggcgattgt
      901 cccgccgtca gatgtcagtg ccggtaagcc tgactatata acggtgtgct agcggaccgc
      961 cagtgtcaca tcgacgcggc tggggcggcc atcgaccgca aaccacacgg gtactgcccc
     1021 gccgggcgag atgccggccg gtacgcgggc gttgatctga accacgcccg ccggcagccc
     1081 cggtgcggtg cctgcgtaaa gcacctccgc ctcctcgcct ccgatgcgca ccacgacggg
     1141 acgctcgagc gccgcggcac tacgggcgag ttcctcggcg ccgagcggcg cctggaactg
     1201 gccggcgccg gtgccgtaca acatcacaac ggagccgcgc gccgccggag ccgccgccga
     1261 attgagccag tagtcctggt tgaggatcgc tccctggccg ctcccgctgt aggacgacgt
     1321 gaacaggccg ggggaagcgg gcagcacggg taactccacg cgcggcgtgg tctggccttg
     1381 atactcgacg cgcaactcgg tcacggtgcg gcccgcgacc tgaaacggca cgatcgcgct
     1441 cacctgatcc gcccgcgtgt agaggatcgg ggcggggaag ccgtcgaaga gcacgcgcgt
     1501 cccggcaagc tggttgcgga tggcgaacct gtccgttgtc agctcaaacg tgacgagctg
     1561 tgcaggtccg atgccggtgc cgtagatggt cacgacttcg cccggcgcca cggcgccggt
     1621 cagtgccgtt gccgcgttcg t
//
LOCUS       DATAIQ010000059         2630 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_279691, whole genome shotgun sequence.
ACCESSION   DATAIQ010000059 DATAIQ010000000
VERSION     DATAIQ010000059.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2630)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2630)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2630
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_279691"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(46..834)
                     /locus_tag="VHN20_00910"
     CDS             complement(46..834)
                     /locus_tag="VHN20_00910"
                     /inference="COORDINATES: protein motif:HMM:NF024739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX2724358.1"
                     /translation="MFNRREILVAAAIAGCIASGPAFAVDAVDLQAAKAEGKVVWYTS
                     TPIETAQKISNLFQKETGIRVELFRSGGSAILSRFQQELAAGRVMVDLLTHSDPAFTS
                     LQVSVVGMMAKNFGWDFYEKLRKNDMMVVPGNQQIADNLKRGERLIAVGNADSYAAEA
                     RKEGHAIATVFPTDGLFVIPSPSHVVKGSPNPNAAKLFATFMLSDAVQKLFPEEDGNY
                     AARADMPPPTGNPELGKIKIIPVDFDYIERETPRIKKRFAEIFS"
     gene            971..2254
                     /locus_tag="VHN20_00915"
     CDS             971..2254
                     /locus_tag="VHN20_00915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018963941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase subunit sigma-70"
                     /protein_id="HEX2724359.1"
                     /translation="MPRNGHIETAHNVRRVGHLDIAGGGQVVIDNRGYAYVGHMKPPH
                     GTSIIDVRDPKNPKVVAEVRLENDLSHTHKVRVVGDLMFTNVEQNDRHLKRKADQLDG
                     LAAKLTGRLGRAPSDAELAAELKVTDEQIAVLREAKRNPYRDGGWKIYDISNRARPEL
                     IHYERTSGFGVHRFDVDASYAYISTEMDGYIGNILVIYDLKDPRKPTEVSRWWLPGQH
                     LAGGETPTWRGYSNRLHHAMRVGDELWAAVWQAGIRVIDISDIRKPTTIASYDYHPPT
                     PEPTHTILPATQLIGGRRIAVGVDEEHDHVRGQPHAHLWVVDVTHHPEIKPLSTFHVG
                     ENASPWSGAPGRFGAHQFQEHIDDTLVFAAWFSGGLRVIDIKDPEAPEEVGWFIPEPV
                     GGNASPQSNDVDVDREGLIYVLDRNRGLDILEFKR"
     gene            complement(2387..>2630)
                     /locus_tag="VHN20_00920"
     CDS             complement(2387..>2630)
                     /locus_tag="VHN20_00920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="Fe(3+) ABC transporter substrate-binding
                     protein"
                     /protein_id="HEX2724360.1"
                     /translation="PTAIIKGSPNPNAAKLLAEFMLGDTAQKFFPEDGGYSARTDIEA
                     PAGSPPLATIKLSEVDYDYIEKDGTRIKKRFSEIFQ"
BASE COUNT          452 a          867 c          874 g          437 t
ORIGIN      
        1 gatggcggat ctcgggaaca cccgagatcc gcggggaggg atgctttacg aaaagatctc
       61 ggcgaagcgc ttcttgatgc gcggcgtctc gcgctcgatg tagtcgaagt cgaccgggat
      121 gatcttgatc ttgccgagct ccgggttgcc ggtcggcggc ggcatgtcgg cgcgcgccgc
      181 gtagttgccg tcctcctccg gaaacagctt ttgcaccgcg tcgctcagca tgaaggtggc
      241 gaacagcttt gccgcgttcg ggttcggcga tcctttgacc acgtggctgg gcgaggggat
      301 cacgaacagg ccgtcggtcg ggaacaccgt cgcgatcgca tggccttcct tgcgcgcctc
      361 cgccgcgtag ctgtcggcgt tgccgacggc gatcaggcgc tcgccgcgct tcaggttgtc
      421 ggcgatctgc tggttgcccg gcacgaccat catgtcgttc ttgcgcagct tctcgtaaaa
      481 gtcccagccg aaattcttgg ccatcatgcc gaccaccgac acctgcagcg aggtgaaggc
      541 cgggtcggaa tgggtgagga gatcgaccat gacgcggccg gccgcgagct cctgctggaa
      601 gcggctcagg atggccgagc cgccggagcg gaaaagctcg acccggatgc cggtctcctt
      661 ctggaacagg ttcgagatct tctgcgccgt ctcgatcggc gtcgacgtgt accagacgac
      721 cttgccttcg gccttggcgg cctgcaggtc gaccgcgtcg acggcgaaag ccgggccgga
      781 agcgatgcag ccggcaatgg ccgccgcgac gagaatctct cttcggttga acatgctccc
      841 tcccaggttt tttccgcccc cgcgttgacc gcggtgccgt ggggggcagg ttccgtccga
      901 tcgcctgttg tgtcaaacgc cgcttccaag taggcgggct ccagcagaga gaaatccggg
      961 aggaatctgg atgccgagga acggccatat cgagaccgcg cacaacgtcc gccgcgtcgg
     1021 ccatctggac atcgccggcg gcggccaggt cgtgatcgac aaccgcggct acgcctatgt
     1081 cggccacatg aagccgccgc acggcacgtc gatcatcgac gtgcgcgatc cgaagaatcc
     1141 gaaagtggtg gccgaggtcc ggctcgagaa cgacctgtcg catacgcaca aggtgcgcgt
     1201 ggtcggcgac ctcatgttca ccaatgtcga gcagaacgac cgccacctga agcgcaaggc
     1261 cgaccagctc gacgggctcg cggcgaagct cacgggccgg ctcggccgcg cgccgagcga
     1321 cgcggagctc gccgccgagc tcaaggtgac ggacgagcag atcgccgtgc tgcgcgaggc
     1381 gaagcgcaat ccgtatcgcg acggcggctg gaagatctac gacatcagca atcgcgccag
     1441 gccggagctg atccattacg agcgcacgtc aggcttcggc gtgcatcgct tcgacgtcga
     1501 tgcgtcctac gcctacatct cgaccgagat ggacggctac atcggcaaca tcctggtcat
     1561 ctacgacctc aaggatccga ggaagccgac ggaggtgtcg cgctggtggc tgccgggaca
     1621 gcacctcgcc ggcggcgaga cgccgacctg gcgcggctac agcaaccgcc tgcaccatgc
     1681 gatgcgcgtc ggcgacgagc tgtgggcggc ggtctggcag gcgggcatcc gcgtcatcga
     1741 catcagcgac atccgcaagc cgacgacgat cgcgtcctac gactaccacc cgccgacgcc
     1801 ggagccgacg cacacgatcc tgccggcgac ccagctgatc ggcggacggc gcatcgccgt
     1861 cggcgtcgac gaggagcacg atcacgtgcg cgggcagccg cacgcccact tatgggtcgt
     1921 cgacgtcacc catcatccag agatcaagcc gctctcgacc ttccatgtcg gcgagaatgc
     1981 cagcccgtgg agcggcgcgc cgggacgctt cggcgcgcac cagttccagg agcatatcga
     2041 cgacacgctc gtcttcgccg cctggttcag cggcggcctg cgcgtcatcg acatcaagga
     2101 ccccgaagcg ccggaggagg tcggctggtt catccccgag ccggtcggcg gcaacgccag
     2161 cccgcagagc aacgacgtcg acgtcgaccg cgagggcctg atctacgtcc tcgaccgcaa
     2221 ccgcggcctc gacatcctcg agttcaagcg ctgacgtcgc tggcgctctc cgaccttgtc
     2281 atcaccgggc ttgtcccggt gatctcgatg tgaagggcgc tgcgcctcca tgaatcgaga
     2341 tggccgggac aagcccggcc atgacaacga aagtggcggt ggatgcttac tggaagatct
     2401 cgctgaagcg cttcttgatg cgcgtcccgt ccttctcgat gtagtcgtag tcgacctcgc
     2461 tcagcttgat cgtggcgagc ggcgggctgc cggccggcgc ctcgatgtcg gtgcgcgccg
     2521 agtagccgcc gtcctccggg aagaacttct gcgccgtgtc gccgagcatg aactcggcca
     2581 gcagcttggc cgcgttcggg ttcggcgagc ctttgatgat ggcggtcggg
//
LOCUS       DATAIQ010000060        10634 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_47402, whole genome shotgun sequence.
ACCESSION   DATAIQ010000060 DATAIQ010000000
VERSION     DATAIQ010000060.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 10634)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10634)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10634
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_47402"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1587
                     /gene="katG"
                     /locus_tag="VHN20_00925"
     CDS             <1..1587
                     /gene="katG"
                     /locus_tag="VHN20_00925"
                     /EC_number="1.11.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008964132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004096 - catalase activity [Evidence
                     IEA];
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="catalase/peroxidase HPI"
                     /protein_id="HEX2724361.1"
                     /translation="GERELAAPFGAVQMGLIYVNPEGPNGKPDPAAAARDIRETFARM
                     AMNDEETVALIAGGHTFGKAHGAGPANHVGVEPEGADLEHQGLGWASTFESGMAGHTI
                     TSGLEGAWTPTPTAWDNSFFDTLFGYEWELTKSPAGAHQWKPKGSSGDGTVPDAHDGK
                     KKHAPMMLTTDLALRVDPVYEKISRRFHKNPQEFAEAFAKAWFKLTHRDMGPIQLYRG
                     KLVPKEPLIWQDPIPVVDHKLIDDKDIESLKAKILATGLSVSQLASAAWASASTYRDS
                     DRRGGANGGRIRLAPLKDWEVNNPPELAKVLQKLEAIQKEFNASASGGKKVSIADLVV
                     LGGSAAVEKAAKAAGHAVKVPFAPGRMDASPEQTEVESFSHLEPKADGFRNWVGPRLI
                     MSQEEHMVDRAQLLTLSAPEMTVLVGGLRVLNVGQPKHGVLTKRPETLTNDFFVNLLD
                     MGTKWKGVPGSDGVFEGRDRKTGEVKWTGTRADLIFGSHSQLRALAEVYGSNDAHEKF
                     VKDFVAAWVKVMNLDRFDLR"
     gene            1792..3030
                     /locus_tag="VHN20_00930"
     CDS             1792..3030
                     /locus_tag="VHN20_00930"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX2724362.1"
                     /translation="MRRINAATAAVFASSLLAGLVAPAQAQTVVTAFEGARLIVGDGS
                     APIENGTLVIDGAKIVQAGRAADVQLPANAARVNLASKTVMPALIDTHVHLSPTREML
                     TRDLKQRAWFGIGAVMSLGTDSIALLDMRGEPMPGAARFLSAGRGITMPEPGRITVPF
                     WITTPAEGRKAVKQLAEQKVDIVKIWVDSRAGKYNKLTPEVYGAIIDEAHKRGLRVTA
                     HIFELEDAKGLLRAGIDAFAHGVRDRDIDDEFVAMFRQRPDLVLTPNLPERGVKTDLG
                     WLRAGLPAAELAKLEAENVDSAEAQQFHGIQARNLARLNAAGARIVLGTDGNRAWAPH
                     DEMADMVAAGMTPMQVIVAATRNSAEFLRLTDAGTLQAGKSADFLVLDANPVDDITNT
                     RRIAAVYLRGTAVDRSQPVR"
     gene            3141..3695
                     /locus_tag="VHN20_00935"
     CDS             3141..3695
                     /locus_tag="VHN20_00935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008962790.1"
                     /note="This protein belongs to a clade of uncharacterized
                     proteins related to peroxidases such as the
                     alkylhydroperoxidase AhpD; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxidase-related enzyme"
                     /protein_id="HEX2724363.1"
                     /translation="MSRYPVPALDTLPEDIRARILKVQEKSGFIPNVFLMLAYRPDEF
                     RAFMAYHDALMDKEGGLSKAEREMIVVATSAANQCQYCVVAHGAILRIRAKNPLIADQ
                     VAANYRKADVTPRQRAMLDFAMKIAQRAETVDEADSAALRAHGFNDDDIWDIAAIAAF
                     FGMSNRLANFTSLRPNDEFYTLGR"
     gene            3872..4108
                     /locus_tag="VHN20_00940"
     CDS             3872..4108
                     /locus_tag="VHN20_00940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724364.1"
                     /translation="MPTPTCVKCGSHSFEVVPFVPLRQGYKLSLVQCASCGAAVGALD
                     PSTKSVVEDLRTRIASIDDRLALIAKALGGSALH"
     gene            4192..5205
                     /locus_tag="VHN20_00945"
     CDS             4192..5205
                     /locus_tag="VHN20_00945"
                     /inference="COORDINATES: protein motif:HMM:NF021507.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphodiester glycosidase family protein"
                     /protein_id="HEX2724365.1"
                     /translation="MRRNLWSRAKAAPLVSLIALIAVFGFGAMAALYAYAGVYGLNVV
                     LRRGGTLWHATGPDDPALSPSMRLALRGDLPAVTAGPLAWRRVAEGFEVAELPVLLGG
                     KAGDEVDRLLLTRVDPGRFRFEVHNRPAGDREPADWLRALGAVFVINGSYFGRKGEPD
                     TPLKSRGAVLGPEEYDARHGAFVATDASAGVRDLAMESWREVLKGASDAMVSYPLLIG
                     ADGQPRVNANERWLANRSFVGEDRDGRIILGTTADAFFSLNRFAAFLRAAPLDLKLVL
                     NLDGGPVACQGIALNGYTRDFCGFGETAVHDGVVKRLASVIPGRRWGLAIVLVAMPRN
                     MTP"
     gene            complement(5317..6300)
                     /locus_tag="VHN20_00950"
     CDS             complement(5317..6300)
                     /locus_tag="VHN20_00950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008597115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2724366.1"
                     /translation="MSGHPASGPLLVVKDLAKTFSSKRGWPVPKTVSVRAIDGVSFSV
                     DRGEALGIVGESGCGKSTVARACLRLIQPDSGDVRFDGIDVVGAGSSELRALRRRLQI
                     VFQDPASALDPRQRIGDALGEPIRVHGVARGREAARSVERLLDEVGLPASAARRYPHE
                     FSGGQRQRIGIARALALGPDLIFADEPVSALDVSVQAQILVLLAELRQRRRLAFVFIS
                     HDLGVVRHFCQRVVVMYLGRIVEEGPVPAIFEEPLHPYTRLLKASSPVPDPDVAVAMN
                     LQEGEPPSPVNPPPGCHFHPRCPFAMEHCRTVTPVLKTVAPDRRVACHLFA"
     gene            complement(6297..7319)
                     /locus_tag="VHN20_00955"
     CDS             complement(6297..7319)
                     /locus_tag="VHN20_00955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008837295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2724367.1"
                     /translation="MSAGVATAAPNAPALSTEPAAITVDGLTTSIRIAGRWFDAVRDV
                     SFEVRRRETLALVGESGCGKSLTALSVMGLLPAGIGRISGGRIVVDGFDMTAADEAGK
                     QAMRGDRIGMIFQEPMTSLNPVLPVGFQIAEALIAHRGMSRRKAQARARELMELVRIP
                     AAAQRLDAYPHQFSGGMRQRVMIAIALACSPKVLIADEPTTALDVTIQAQVLALLADL
                     QAREGLAVLLITHNLGVVASVADRVMVMYGGDVVESAPAKAFFRRPTHPYSEALLRAM
                     PRVDQPTEALAPIPGQVPTLPQMPAGCRYQSRCPLRIETCAERPPLNPLPGAPEHRVR
                     CWVRAP"
     gene            complement(7316..8203)
                     /locus_tag="VHN20_00960"
     CDS             complement(7316..8203)
                     /locus_tag="VHN20_00960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015667459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX2724368.1"
                     /translation="MSALGTTAAPAAPAAVVIAAPSAWRRATRSGGLAIGSVLVAVIA
                     LLAVLAPWISPYDPDAQDVLMKLEPPSAEHWFGTDAFGRDVLSRVIWGARVSLFVGTV
                     ATLAGVLVGTVIGIVSGYYGGIVDKLITAATDVLLSFPQLIMGLILVAVLGPSLFNLI
                     LAIAITAVPAFIRVARGSTLAMKERDFVDACRALGYSDLRIMFLHVLPNIMDEVVVMG
                     SLWLAAAIRTESTLAFIGLGVPPPTATWGGIIREGFDNLLDAPWLSVFPSLAILAVMI
                     ALNLIGDGLRDATDPRAPQ"
     gene            complement(8200..9141)
                     /locus_tag="VHN20_00965"
     CDS             complement(8200..9141)
                     /locus_tag="VHN20_00965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015667460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX2724369.1"
                     /translation="MIRFVARRLLLAIPTLWAVLTLVFVLVRVVPGDPTIVVLGDQAS
                     PAARDALRQRLGLDKPILVQYADFMVQIAHGDLGRSLVTNRPITADVAAVLPYTIELT
                     LAALFIGSVIGVPLGVVAAQRRDGFVDWVARVVSLAGLSFPAFVSGILLLIVFAVELR
                     WFPVISTVETSDPLERLRALVLPAFNLGLIMVAYVTRVTRSGMLKALSEDYVRTARAK
                     GLSARLVVWRHALRNVLIPVVTVIGLYLGVLIGNAVLTEIVFNRPGLGKLIVSALNQR
                     DYALLQGLMVVTALAIVLANILTDLTYGVVDPRVKSA"
     gene            complement(9196..>10634)
                     /locus_tag="VHN20_00970"
     CDS             complement(9196..>10634)
                     /locus_tag="VHN20_00970"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX2724370.1"
                     /translation="INQLDPHRLTTTQDKPLTAWVFNGLVRFKPGSANLEALEPDLAE
                     RWESTPDKLTWTFHLRKGVKFHGDYGELTADDVVFSLKRAGDQKSSSFYADYAAVETV
                     EAVDPYTVRIKLKQAVPAFLGLVTNYHGGFVVSRKAVEKLGENFRLNPIGTGPFKFEV
                     YKPNESVTFVANKDYFRGAPKIDRIVYRLIPADSARDLAFSSGELDVVYGRQDQKWVE
                     RMKKEKGIEVVVLRPAELALLHLNSTMKPLDDKRVRQAIAHAISQKQIVSFKGDLTAD
                     PPVSIVPAGYLGTAEVPLLPHDVNKAKALLKEAGFSGPVVVKSVQSSLPSMLSTSQVL
                     QSQLKQVGIDLQLEVVDHQTFHANIRKDLSGAVYYTAARFPVADVYLTQFFHSRAIVG
                     TPTAVTNFSHCSVADKEIEAARIEADPAKQKELWATAQRKIVDEVCAVPLFEQLQVWA
                     YKSNVDFGYKLTDAIHLGPVITEATTKK"
BASE COUNT         1773 a         3598 c         3696 g         1567 t
ORIGIN      
        1 ggcgagcgtg agctcgcggc gccctttggc gcggtgcaga tgggcttgat ctacgtcaac
       61 ccggaagggc cgaacggcaa gcccgacccg gcggccgcgg cgcgggacat ccgcgaaacc
      121 ttcgcccgca tggccatgaa cgacgaggag accgtcgcgc tcatcgccgg cggccacacc
      181 ttcggcaagg cgcacggcgc cggcccggcg aaccacgtcg gcgtcgagcc ggaaggcgcc
      241 gacctcgagc accagggcct cggctgggcg agcaccttcg aaagcggcat ggccggccac
      301 accatcacca gcggtctcga aggcgcgtgg acgccgacgc cgaccgcatg ggacaacagc
      361 ttcttcgaca ccctgttcgg ttatgaatgg gagctgacca agagccccgc cggcgcgcac
      421 cagtggaagc cgaaaggcag ctccggcgac ggcacggttc ccgatgcgca tgatggcaag
      481 aagaagcacg cgccgatgat gctgacgacc gatctcgcgc tgcgcgttga cccggtctac
      541 gagaagatct cgcgccgttt ccacaagaac ccgcaggagt tcgccgaggc gttcgccaag
      601 gcgtggttca agctcacgca ccgcgacatg ggcccgatcc agctctatcg cggcaagctc
      661 gtgccgaagg agccgctgat ctggcaggac ccgatcccgg tggtcgacca caagctgatc
      721 gacgacaagg acatcgaatc gctcaaggcg aaaatcctgg cgaccgggct gtccgtgtcg
      781 cagctggcgt cggccgcctg ggcgtcggcg tcgacctatc gtgactcgga caggcgcggc
      841 ggcgccaatg gcgggcgcat ccgcctcgcg ccgctaaagg actgggaggt gaacaatccg
      901 cccgagctgg cgaaggtgct gcagaaactc gaagccatcc agaaggagtt caacgcgtcc
      961 gcgtccggcg gcaagaaggt ctcgatcgct gacctcgtcg tgctcggcgg cagcgccgcc
     1021 gtcgagaagg ccgccaaggc ggccggacat gccgtgaagg tgcccttcgc gcccgggcgc
     1081 atggacgcgt cgccggagca gaccgaggtg gagtcctttt ctcatctcga gcccaaggcg
     1141 gacggcttcc gcaactgggt tggcccgcgg ctgatcatgt cgcaggaaga gcacatggtg
     1201 gaccgggctc agctgctgac gctgtcggcg cccgagatga cggtgctcgt cggcggcctg
     1261 cgcgtgctca atgtcggcca gcccaagcac ggcgtgctca cgaagcgccc cgagacgctg
     1321 accaacgact tcttcgtcaa cctgctcgac atgggcacga agtggaaggg cgttcccggc
     1381 tccgacggcg tgttcgaagg tcgcgaccgc aagaccggcg aggtcaagtg gaccggcacg
     1441 cgtgccgacc tgatcttcgg ctcgcactcg cagctgcgcg cgctcgccga ggtctacggg
     1501 agcaacgacg cgcatgagaa attcgtgaag gatttcgtcg ccgcgtgggt caaggtgatg
     1561 aacctcgatc gcttcgatct ccgctgatcc gacgcgttcg cggccgctcc tggccgccac
     1621 cacaagcggc gggcgtcccc tggcggtgac gcccgctttt ttttgacgcc gcggcgaaaa
     1681 acctcccgcc gcgcaacaat tccgctcccg cattcgtgtc ctgccctccc cttcccttcg
     1741 ccgctcgggc gccgctaccg tgcggcggtc gggtttgatc gaggggatcc catgcgccga
     1801 ataaacgctg ccacggctgc cgttttcgcc tccagcctgc tcgcgggcct cgtggctccg
     1861 gcgcaggcgc agaccgtggt cacggcgttc gagggcgcgc gcctgatcgt cggcgacggc
     1921 agcgcgccga tcgagaacgg gacgctcgtc atcgacggcg ccaaaatcgt gcaggccggc
     1981 agggccgccg acgtccagct tccggccaac gccgcgcgcg tgaatctggc cagcaagacc
     2041 gtgatgccgg ccctgatcga cacgcatgtc catctcagcc cgacgcgcga gatgctgacg
     2101 cgtgacctga agcagcgcgc ctggttcggc atcggcgccg tcatgagcct cggcaccgac
     2161 agtatcgcgc tgctcgacat gcgcggcgag ccgatgccgg gcgcggcgcg cttcctcagc
     2221 gcggggcgcg gcatcaccat gcccgagccg gggcggatca cggtgccgtt ctggatcacg
     2281 accccggcgg aaggccgcaa ggcggtcaag cagctcgccg agcagaaggt cgacatcgtc
     2341 aagatctggg tcgacagccg cgccggcaaa tacaacaagc tgacgccgga ggtttacggg
     2401 gcgatcatcg acgaggcgca caagcgtggc ttgcgcgtca ccgcgcacat cttcgagctc
     2461 gaggatgcca aggggctgct ccgcgccggc atcgacgcgt tcgcgcacgg ggtccgcgac
     2521 cgcgacatcg acgacgagtt cgtcgccatg ttccgacagc ggcccgacct ggtgctcaca
     2581 cccaatctgc cggagcgcgg cgtcaagacc gatctcggct ggctgcgcgc cggcctgccg
     2641 gccgccgagc tggcgaagct cgaggcggag aacgtcgaca gcgcggaggc gcagcagttc
     2701 cacggcatcc aggcgcgcaa cctcgccagg ctcaacgccg caggcgcgcg catcgtcctc
     2761 ggcacggacg gcaaccgggc gtgggcgccg catgacgaga tggccgacat ggtcgcggcc
     2821 ggcatgaccc ccatgcaggt gatcgtggcg gcgacgcgca actcggccga gttcctgcgc
     2881 ctcacggatg cgggcacgct gcaggccggc aagagcgccg actttctcgt gctcgacgcc
     2941 aacccggtcg acgacatcac caacacgcgc cgcatcgccg cggtgtatct gcgcggcacg
     3001 gcggtcgacc gcagccagcc ggtgcgctga gattttttgg gtgcacgatg aaggacgacg
     3061 tgaaatcccg aagcagcagg cccgatgatc gcggcggggc cgcgtcgcgc gcagcggtcg
     3121 ccgaggcggc gccgccgccg gtgagccgct atcccgtgcc ggcgctcgac acgctgcccg
     3181 aggacatccg ggcgcgcatc ctcaaggtgc aggagaagtc cggcttcatt cccaacgtct
     3241 tcctgatgct cgcctaccgg cccgacgagt tccgcgcctt catggcctat cacgacgcgc
     3301 tgatggacaa ggagggcggc ctcagcaagg ccgagcgcga gatgatcgtg gtggcgacct
     3361 ccgcggccaa ccagtgccag tattgcgtcg tcgcgcacgg cgccatcctg cgcatccgtg
     3421 cgaaaaatcc gctgatcgcc gatcaggtcg ccgccaacta ccgcaaggcc gacgtcacgc
     3481 cccgccagcg cgccatgctc gacttcgcca tgaagatcgc ccagcgcgcc gagacggtcg
     3541 acgaggccga cagcgcggct ttgcgcgccc acggtttcaa tgacgacgac atctgggaca
     3601 tcgccgccat cgccgccttc ttcggcatgt cgaaccgcct cgccaatttc acgagcctgc
     3661 gccccaacga cgagttttat acgctcgggc ggtgaggcaa gccgccgcga cgcttttgct
     3721 gcgaggctgc acggaggcct ccggaaggac cgcgaccgcg gggctccgca ccggcgccat
     3781 gctcgagttc gccgaagccc ctgtgttgcc gcgcacagcg ccgtgcgcat gaacgcgaca
     3841 gcttcgcgga aattcatacc gggtccccga catgccaact cccacctgcg tcaaatgcgg
     3901 cagccacagc ttcgaagtcg tgccgttcgt cccgctgcgg cagggctata agctgagcct
     3961 cgtccaatgc gccagctgcg gcgccgccgt cggcgcgctc gacccgagca cgaagtctgt
     4021 ggtcgaagac ctgaggacca ggatcgcctc gatcgacgat cgcctggcgc tcatcgcgaa
     4081 ggcgctcggc ggatctgcgt tgcattgagg gcgagggccc gcggcgctgc cgtctcggaa
     4141 gctgactgcg gggcgcgtcg cattggttgc gaaatccatt aaggtgcgct catgcgacgg
     4201 aatctctggt cgcgcgccaa ggcggcgccg ctcgtttcgc tgatcgcgct catcgccgtt
     4261 ttcgggttcg gcgccatggc ggcgctttac gcgtatgcgg gcgtctatgg tctcaacgtc
     4321 gtgctgcgac gtggcggcac cctgtggcac gcgacagggc cggacgaccc ggcgctgtcg
     4381 ccgagcatgc ggctggcatt gcgcggcgac ctgcccgccg tcacggccgg cccgttggcg
     4441 tggcgccgtg tcgccgaggg tttcgaggtc gccgagttgc ccgtgctgct cggcggcaag
     4501 gcaggcgacg aggtcgaccg ccttctcctt acccgcgtcg atcccggccg cttccgcttc
     4561 gaggtgcaca accgtcccgc cggcgatcgc gagcctgccg actggctgcg ggcgctcggc
     4621 gcggtattcg tgatcaacgg cagctacttt gggcgcaaag gcgagccgga cacgccactg
     4681 aagagccgcg gagcggttct cggcccggag gaatacgatg cgcgccacgg cgccttcgtc
     4741 gccaccgacg cgtcggccgg cgtccgagac ctcgcgatgg agagctggcg cgaggttctg
     4801 aagggcgcga gcgacgccat ggtgtcctat ccgcttctga tcggcgcgga cgggcagccg
     4861 cgggtcaacg ccaacgagcg ctggctcgcc aaccggtcgt tcgtgggcga agaccgcgac
     4921 ggacgcatca tcctcggcac gacggctgat gccttcttct cgctcaaccg cttcgccgcg
     4981 ttcctgcgcg ccgcgccgct cgacctgaaa ctcgtcctca acctcgacgg tggtcctgtt
     5041 gcctgccagg gcatcgcgct gaatggctac acgcgcgact tttgcggctt cggcgagacg
     5101 gcggtgcatg acggagtggt caaacggctt gcctccgtga tcccgggccg aagatggggc
     5161 cttgcaatcg tgctggtggc gatgccgcgc aacatgacgc cgtgaggatt ccgcttccgc
     5221 ttgccgccgc ctcgcggaac tcgccggtcg gctgcaagac ctccaaaccg gctaccgcca
     5281 cccggggcgc cggcgcgaaa agcggcttgc ggacagtcag gcgaacaggt ggcacgcaac
     5341 ccggcggtca ggcgcgaccg tcttcagcac gggcgtgacc gtcctgcaat gctccatcgc
     5401 gaacgggcag cgcgggtgga aatggcagcc gggcggcggg ttcacggggg acggcggctc
     5461 gccttcctgc aggttcatcg ccacggctac atcgggatcg ggcaccggag aggatgcctt
     5521 gagaaggcgc gtgtacgggt gcagcggctc ctcgaagatc gcaggcaccg ggccttcctc
     5581 gacgatgcgg ccgagataca tgacgacgac gcgctgacag aagtgccgca ccacgccgag
     5641 gtcgtgcgaa atgaagacga aggcgagccg gcgccgctgc cgcagctcgg cgagaagcac
     5701 caggatttgc gcctgcacgc tcacgtcgag cgcggacacc ggctcgtcgg cgaagatcag
     5761 gtccggtccg agcgcgagcg cgcgcgcgat gccgatgcgc tggcgctggc cgccggagaa
     5821 ctcgtgcgga tagcgtcgcg cggccgaagc cggcaggccc acctcgtcga ggaggcgctc
     5881 gacgctgcgc gcggcctctc tgcccctggc gacgccgtgc acccggatcg gctcgccgag
     5941 cgcgtcgccg atgcgctgcc gcggatcgag cgccgaggcc ggatcctgga acacgatctg
     6001 aagacggcgc cgcagcgccc gcagctcgga cgagccggct ccgaccacgt cgatcccgtc
     6061 gaagcgcacg tcgccggaat cgggctggat caggcgcagg caggcgcgcg cgacggtcga
     6121 cttgccgcag ccggattccc cgacgatgcc gagcgcctcg ccgcgatcca cggaaaacga
     6181 gaccccgtcg atggcgcgca ccgaaaccgt cttcggcacg ggccagccgc gtttgctgct
     6241 gaaggtcttg gcgaggtcct tcacgacgag caacggcccg cttgccggat gcccgctcat
     6301 ggcgccctca cccagcagcg gacgcggtgc tccggcgcgc cgggaagcgg attgagcggc
     6361 ggccgctccg cgcatgtctc gatgcgcaac gggcaacgcg actggtagcg gcagccggcc
     6421 ggcatctgcg gcagcgtcgg cacctgcccc gggatcggcg ccagcgcctc ggtcggctgg
     6481 tcgacgcgcg gcatcgcgcg cagcagcgcc tcgctgtagg gatgggtcgg gcggcggaag
     6541 aacgccttgg ccggggcgct ttcgaccacg tcgccgccat acatgaccat gacgcggtct
     6601 gcgaccgagg cgacgacgcc gagattgtgc gtgatcagga ggacggcgag cccttcccgc
     6661 gcctgaagat cggcgagaag cgccagcacc tgcgcctgga tggtcacgtc gagcgccgtc
     6721 gtcggctcgt cggcgatcag cactttcggc gagcaggcga gcgcgatggc gatcatcacg
     6781 cgctggcgca tgccgcccga gaactggtgc gggtaagcat cgagtcgctg cgccgcagcc
     6841 gggatgcgca cgagctccat cagctcgcgc gcgcgcgcct gcgccttgcg ccggctcatg
     6901 ccgcgatgcg cgatcagcgc ttccgcgatc tggaagccga cgggcaggac agggttcaac
     6961 gacgtcatcg gctcctggaa gatcatgccg atgcggtcgc cacgcatcgc ctgcttgccg
     7021 gcttcgtccg cggccgtcat gtcgaagccg tcgacgacga tccgtccgcc cgagatgcgg
     7081 ccgatgccgg ccggcagcag ccccatcacc gacagcgcgg tgaggctctt gccgcagccg
     7141 gattccccga cgagcgccag cgtctcccgg cggcggacct cgaagctcac gtcgcgcacg
     7201 gcgtcgaacc agcggccagc gatgcggatc gatgtcgtca gcccgtccac cgtgatcgcc
     7261 gcgggctcgg tcgaaagcgc cggcgcgttc ggcgccgcgg tcgcgacgcc ggcgctcact
     7321 gcggcgccct cggatcggtg gcgtcgcgca ggccgtcgcc gatcaggttc agggcgatca
     7381 tcaccgccag gatggcgagg ctcggaaaca ccgaaagcca tggggcgtcg agaaggttgt
     7441 cgaagccctc gcggatgatc ccgccccagg tcgcggtcgg cgggggaacg ccgaggccga
     7501 tgaaggcgag cgtcgactcg gtgcggatcg ccgccgccag ccacagcgat cccatcacta
     7561 ccacctcgtc catgatgttc ggcaggacgt ggaggaacat gatgcgcagg tcgctatagc
     7621 cgagcgcgcg gcaggcgtcg acgaagtcgc gctccttcat ggcgagcgtc gagccgcgcg
     7681 ccacccggat gaaggccggc accgccgtga tggcgatggc gaggatcagg ttgaacaggc
     7741 tcgggccgag cacggcgacg aggatcagcc ccatgatgag ctgcgggaag ctcaggagga
     7801 cgtctgtcgc cgccgtgatc agcttatcga cgatgccgcc gtaatatccg gagacgatgc
     7861 cgatcaccgt gccgacgagc accccggcca gcgtcgccac ggtgccgacg aacagcgaca
     7921 cgcgcgcgcc ccagatcacg cgggagagca cgtcgcggcc gaacgcgtcg gtgccgaacc
     7981 aatgctcggc ggagggcggc tcgagcttca tcagcacgtc ctgcgcgtcc ggatcgtagg
     8041 gactgatcca gggcgcgaga acggccagga gcgcgatcac ggccacgagc acggatccga
     8101 tggcgaggcc gccggagcgg gtggcgcgcc gccacgccga cggcgccgcg atcacgaccg
     8161 cggcgggggc ggccggggcg gccgtggtgc cgagggcgct catgcgctct tcacccgcgg
     8221 atcgacgacg ccgtaggtca ggtcggtgag gatgttggca agcacgatgg cgagcgccgt
     8281 cacgaccatg agaccctgaa gcagggcgta gtcgcgctga ttcagcgccg agacgatcag
     8341 cttgccgagg ccgggccggt tgaagacgat ctcggtcagg accgcattgc cgatgaggac
     8401 gccgagatag agtccgatca cggtgacaac cgggatcagc acgtttcgaa gtgcgtgccg
     8461 ccagacgacg agccgggccg acaggccctt ggcgcgcgcc gtgcggacat aatcctctga
     8521 gagggccttc agcatgcccg agcgcgtcac gcgggtgacg taggctacca tgatcagccc
     8581 gagattgaac gccggcagga ccagtgcgcg caggcgctcg agcgggtccg aggtctcgac
     8641 ggtcgagatg acgggaaacc atctcagctc gacggcgaag acgatgagca ggaggatgcc
     8701 ggagacgaag gccggaaagg agaggccggc gagcgagacg acgcgggcga cccagtcgac
     8761 gaagccgtcc cgccgctgcg ccgcgacgac tcccagcggc accccgataa cactgccgat
     8821 gaaaagcgcc gcgagcgtca gctcgatggt gtacggcagc accgcggcga catcggcggt
     8881 gatcggccgg ttcgtcacga gcgagcggcc gagatcgccg tgcgcgatct gcaccatgaa
     8941 gtcggcgtat tgcaccagga tcggcttatc gaggccaagc cgctggcgca gcgcgtcgcg
     9001 cgccgccggg ctcgcctgat cgccgaggac cacgatggtc gggtcgccgg gaacgacccg
     9061 cacgagaacg aagacgagcg tcagcaccgc ccagagggtc gggatggcaa gcagcagacg
     9121 cctggcgacg aagcggatca tcggagcgac cgtgaaagcg tgcccaactc cctctcccgg
     9181 agggacatgt gagacctact tcttcgtcgt cgcctcggtg atcaccggcc cgaggtggat
     9241 cgcgtcggtg agcttgtagc cgaagtcgac attgctcttg taggcccaca cctgcagctg
     9301 ctcgaacagc ggcacggcgc agacctcgtc gacgatcttg cgctgggcgg tcgcccacag
     9361 ctccttctgc ttcgcggggt cggcctcgat gcgcgccgcc tcgatctcct tgtcggcgac
     9421 gctgcaatgg gaaaagttcg tgaccgcggt cggcgtcccg acgatcgcgc gcgagtggaa
     9481 gaactgcgtc aggtagacat ccgcgacggg gaagcgcgca gccgtgtagt agacggcgcc
     9541 gctcaggtcc ttcctgatgt tggcatggaa ggtctggtga tcgaccacct cgagctgaag
     9601 gtcgatgccg acctgcttga gctggctctg caggacctgg ctcgtgctca gcatcgaggg
     9661 caggctcgac tggaccgact tgaccacgac cgggccgctg aacccggcct ccttgagcag
     9721 cgccttggcc ttgttcacgt cgtgcggcaa cagcggcact tcggccgtgc cgagatagcc
     9781 ggcggggacg atggaaacgg gcgggtcggc cgtgaggtcg cccttgaagc tcacgatctg
     9841 cttctggctg atggcgtggg cgatcgcctg gcgcacgcgc ttgtcgtcga gcggcttcat
     9901 cgtcgagttg aggtgcagga gagcgagctc ggccggccgc agcacgacga cttcgatgcc
     9961 cttctccttc ttcatgcgct cgacccattt ctggtcctgg cggccgtaga ccacgtcgag
    10021 ctcgcccgac gagaaggcga ggtcgcgcgc ggaatcggcg gggatcagcc ggtagacgat
    10081 gcgatcgatc ttgggcgcgc cccggaagta gtccttgttg gcgacgaagg tgacgctctc
    10141 gttcggcttg tagacctcga acttgaacgg gccggtgccg attgggttca ggcggaaatt
    10201 ctcgccgagc ttctcgaccg ccttgcggct gacgacgaag ccgccgtggt agttggtgac
    10261 aaggccgagg aacgcaggca ccgcctgctt cagcttgatg cggaccgtgt aggggtcgac
    10321 cgcctcgacc gtctcgaccg ccgcgtagtc ggcgtagaag gaggacgact tctggtcccc
    10381 ggcgcgcttg agcgagaaga ccacgtcgtc ggcggtgagc tcgccgtagt cgccgtggaa
    10441 cttcacgccc ttgcgcaggt gaaacgtcca ggtgagcttg tcgggcgtgc tctcccagcg
    10501 ttccgcgagg tcaggctcga gcgcctcgag attggcggag cccggcttga agcgcacgag
    10561 gccgttgaag acccaggccg tgagcggctt gtcctgcgtg gtcgtcaacc ggtgcggatc
    10621 gagctggttg atgt
//
LOCUS       DATAIQ010000061         1997 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_185947, whole genome shotgun sequence.
ACCESSION   DATAIQ010000061 DATAIQ010000000
VERSION     DATAIQ010000061.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1997)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1997)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1997
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_185947"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1217)
                     /gene="mltG"
                     /locus_tag="VHN20_00975"
     CDS             complement(<1..1217)
                     /gene="mltG"
                     /locus_tag="VHN20_00975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020092705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008932 - lytic endotransglycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HEX2724371.1"
                     /translation="MFRKKTHNFIPLEGELAPEEPPRLVPKSPSEAIKPLAAPPPPPR
                     MRRRRGLLSVLSGALTLAVLLAFAGIFGVAGLEQQVREPGPLAQDKVVVIPRNIGTSE
                     IADVLRREGVISRSLLFRAYAYLNRQRGPLKAGEFQFKAGASIDDAIDTLIEGRAILH
                     AFTAPEGLTSEQIVARLRENEVLTGDITEVPREGSLLPDTYKFERGTTRQQLVNLMQE
                     KHRQALTQVWSRKSPDLPIRTPQELVILASIVEKETGRSDERGRVAGVFVNRLGKRMK
                     LQSDPTIVYGLVGGKGTLGRGILRSEIDKATPYNTYAIEGLPPGPIANPGRASLEAAA
                     NPARTRDLYFVADGTGGHAFAENLEQHQRNVVRWRQIERSRAAGEVDRAEPPPLPGDA
                     APAAPAPAPAPSPR"
     gene            complement(1306..>1997)
                     /locus_tag="VHN20_00980"
     CDS             complement(1306..>1997)
                     /locus_tag="VHN20_00980"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020095202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HEX2724372.1"
                     /translation="MVAGGAESPINRLSIAGFAACRALSTNFNEEPKRASRPYDRDRD
                     GFVMGEGAGIVVLEDYEHAKARGAKIYAEVIGYGMSGDAYHITSPAEDGDGAYRCMKA
                     AITRAGVSPSDIDYINAHGTSTPLGDELELKAVERLVGNAAAKLAMSSTKSAIGHLLG
                     AAGAVEAIFSVLALRDQVVPPTLNLDNPSVETAIDLLPHEAKARPVEVVLSNSFGFGG
                     TNASLVFRRAA"
BASE COUNT          293 a          659 c          722 g          323 t
ORIGIN      
        1 cgcgggctcg gagccggcgc gggcgccgga gccgcgggtg cggcgtcgcc gggcagcggc
       61 ggcggctcgg cgcggtcgac ctcgccggcg gcgcggctgc gctcgatctg ccgccagcgc
      121 acgacattgc gctggtgctg ctcgaggttc tccgcgaagg cgtgcccgcc ggtgccgtcg
      181 gcgacgaaat agagatccct ggtacgggcc ggattggcgg cggcctcgag ggatgctcgc
      241 ccgggattgg cgatgggccc gggcggcagg ccctcgatcg cgtaagtgtt gtacggggtg
      301 gccttgtcga tctcgctgcg caggatgccg cggccgagcg ttcccttgcc gccgacgagg
      361 ccatagacga tggtcgggtc cgactgcagc ttcatgcgct tgccgaggcg gttcacgaac
      421 acgccggcga cgcgcccgcg ctcgtccgag cgccccgttt ccttctcgac gatcgaggcg
      481 aggattacga gctcctgcgg cgtgcggatc ggcaggtccg gcgacttgcg cgaccacacc
      541 tgcgtcaacg cctgccggtg cttctcctgc atcaggttga cgagctgctg gcgggtcgtc
      601 ccgcgctcga acttgtaggt gtcgggcaga agcgaccctt cgcgcgggac ctcggtgatg
      661 tcgccggtca ggacctcgtt ctcgcgcagc cgcgcgacga tctgctcgct ggtcagccct
      721 tccggggccg tgaaggcgtg caggatggcc cgtccctcga tcagcgtgtc gatcgcgtcg
      781 tcgatgctgg cgccggcctt gaactggaac tcgcccgcct tgagcggacc gcgctggcga
      841 ttgagatagg cgtaggcgcg gaacagaagc gaccggctga tgaccccttc gcgtcgcagc
      901 acgtcggcga tctcgctggt gccgatgttg cggggaatga ccaccacctt gtcctgggcc
      961 aatggcccgg gctcgcgcac ctgctgctcg agcccggcga caccgaagat gccggcgaag
     1021 gcgagcagca cggccagcgt cagcgcgccg ctcaggaccg acaggaggcc gcgccgccgc
     1081 cgcatgcgcg gcgggggcgg cggcgccgcc agcggcttga tcgcctcgct cgggctcttg
     1141 ggcaccaggc gcgggggctc ctccggagcg agctcccctt cgagcggaat gaagttatgg
     1201 gtctttttgc ggaacatcat cacgcctggg gtgccgcgag tcgcttaaca aagtggaagg
     1261 acgccataac ctgagcacga ttatggcaag accctgcgcc tgaagctatg cggcgcgccg
     1321 gaacaccagc gacgcgttgg ttccgccgaa cccgaacgag ttcgagagca cgacctccac
     1381 agggcgggcc ttggcctcat gcggcagaag gtcgatcgcc gtctcgacgg acggattgtc
     1441 gaggttcaac gtcggcggca cgacctggtc gcgcagggcg agcaccgaga agatggcctc
     1501 gacggcgccg gctgcgccga gaaggtggcc gatggccgac ttggtcgagg acatggcgag
     1561 cttggcggca gcgttgccga ccagccgttc gaccgccttg agctcgagct cgtcaccgag
     1621 gggcgtcgag gtgccgtggg cgttgatgta gtcgatatcg gacggcgaaa ccccagcccg
     1681 cgtgatggcc gccttcatgc atcggtaggc gccgtcgccg tcctcggccg gcgaggtgat
     1741 gtgataggca tcgccggaca tgccgtagcc gatcacctcg gcgtagatct tggctccgcg
     1801 cgccttggcg tgctcgtaat cctcgagcac gacgatcccg gctccctcgc ccatcacgaa
     1861 accgtcccgg tcccggtcat aggggcgcga ggcgcgcttg ggctcctcgt tgaaatttgt
     1921 ggataaagcc cggcaggcgg cgaagccggc gatcgagagc cggttgatcg gcgattccgc
     1981 gccgccggcg accatga
//
LOCUS       DATAIQ010000062         3484 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_324388, whole genome shotgun sequence.
ACCESSION   DATAIQ010000062 DATAIQ010000000
VERSION     DATAIQ010000062.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3484)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3484)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3484
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_324388"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(49..1458)
                     /gene="thrC"
                     /locus_tag="VHN20_00985"
     CDS             complement(49..1458)
                     /gene="thrC"
                     /locus_tag="VHN20_00985"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004795 - threonine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HEX2724373.1"
                     /translation="MLHISTRGEAPAIGFSDALLTGLARDGGLYVPDAWPALSREKIQ
                     GFAGRRYADVAKAVLGALIDDIPVAELGRMVEEAYAGFRHPAICPLTQIGDNLFVLEL
                     FHGPTLAFKDVAMQLLGRMMDHVLKARGGRATIIGATSGDTGSAAVEAFRGSSQVDVF
                     ILYPHGRVSDVQRRQMTTVDAPNVHAIALEGTFDDCQAIVKGLFNHARFRDELHLSGV
                     NSINWARIAAQTVYYFTAAVALGGPHRLVSFSVPTGNFGDILAGWIARRMGLPVGRFM
                     LATNANDILARVLATGSYEVRTVTPTTSPSMDIQVSSNFERLLFEAYGRDAAAVRRLM
                     ANLAQARAFTVDAAPLARLRAEFAAHAVGEEAVADEIAATWRDAAYLLDPHTAVGVRA
                     GRALLGGEPQTPVVALATAHPAKFPEVVERATGVRPQLPAHLAMLMDRAERFTALAND
                     QSAVESFIRERARVVRAAA"
     gene            complement(1620..2147)
                     /locus_tag="VHN20_00990"
     CDS             complement(1620..2147)
                     /locus_tag="VHN20_00990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724374.1"
                     /translation="MDARLLPLLTRMSADLDRAYPGTVTLFLDGNFPFLDGFPLLPHL
                     SHNDGRKLDLAFYYAAPDGTYLPGRLRSPIGYWAFETPTEGDPLPCSGPAWLSLRWDL
                     TFLQGFFPDRPIEPDRTRAALAWLVSEGPRHGVERVFVEPHLVRRLAVASPLIGFQGC
                     RAARHDDHIHFQVRR"
     gene            complement(2491..3237)
                     /locus_tag="VHN20_00995"
     CDS             complement(2491..3237)
                     /locus_tag="VHN20_00995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SURF1 family protein"
                     /protein_id="HEX2724375.1"
                     /translation="MPQRFRTLLIPGISTLAALAILIALGVWQLERMAWKQDLVARID
                     MRAHGEPDAIVPEPRWPEWRAEDDEFRAVRLTGTALHDKEVLVHGLMSGQRGSPLQGF
                     YVFTPVRLASGGVVMLNRGFIPGELRDPARRPETQAGSTVAVTGLMRAPEPRGWFMPE
                     NKPELEQWFTRDLAAMAQARGLERVAPFWVDAAPVANATGWPRPGQTRLSIPNNHLQY
                     ALTWFGLALTLVGVFGAWAWRRRREAAPPV"
BASE COUNT          597 a         1163 c         1257 g          467 t
ORIGIN      
        1 cgagccgcgt gatccggacc gccggatcgc tggccgcgaa atgatggctc atgcggcggc
       61 ccggacgacg cgcgcgcgtt cgcggatgaa actctcgacg gcgctctggt cgttggccag
      121 cgcggtgaag cgctccgccc ggtccatcag catggcgaga tgagccggca gctgcggccg
      181 cacgcccgtc gcccgttcga ccacttcggg gaatttggcc gggtgcgccg tggcaagggc
      241 aaccaccggc gtctgcggct cgccgccaag cagcgcgcgg ccagcccgca cgccgaccgc
      301 cgtgtgcgga tcgaggaggt aggcagcatc gcgccacgtg gcggcgatct cgtcggccac
      361 ggcttcttca ccgacggcgt gagcggcgaa ttccgcccgc aggcgcgcca gcggcgcggc
      421 gtcgaccgtg aaggcgcgcg cctgcgccag attggccatg agccggcgca cggcggcggc
      481 atcgcgccca taggcctcga acaagagccg ctcgaaattc gacgacacct ggatgtccat
      541 cgacggcgag gtggtcggcg tcaccgtgcg cacctcgtag ctgccggtcg cgaggacgcg
      601 ggcgaggatg tcattggcgt tggtcgccag catgaagcgc ccgaccggaa ggcccatgcg
      661 cctggcgatc cagccggcca ggatgtcgcc gaaatttccc gtcggcacgg agaacgaaac
      721 cagccggtgc gggcccccca gcgccaccgc cgccgtgaaa tagtagaccg tctgggcggc
      781 gatgcgcgcc cagttgatgg agttgacgcc cgacaggtgc agctcgtcgc ggaaacgggc
      841 gtgattgaac agccctttga cgatcgcctg gcagtcgtcg aacgtccctt cgagagcgat
      901 cgcatgcacg ttgggcgcgt cgacggtggt catctgccgg cgctgcacgt cggagacccg
      961 cccgtgcgga tagaggatga acacgtccac ctgcgaggag ccgcgaaacg cctcgacggc
     1021 ggcgctgccg gtatcccccg atgtcgcgcc gatgatggtg gcgcgcccac cgcgcgcctt
     1081 gagcacgtgg tccatcatgc ggccgaggag ctgcatggcg acgtccttga aggcgagggt
     1141 cgggccgtgg aacagctcca gcacgaacag gttgtcgccg atctgcgtca gcgggcagat
     1201 cgccgggtgg cggaacccgg cataggcctc ctcgaccatg cggccgagct cggcgacagg
     1261 aatgtcgtcg atcagcgcgc cgagcacggc cttggcgacg tcggcgtaac gccggccggc
     1321 aaagccctgg attttctcgc gcgacagcgc cggccaggca tcgggcacat acagcccgcc
     1381 atcgcgcgcc agcccggtca gcagcgcatc gctgaaaccg atcgccgggg cttcgccgcg
     1441 ggtggagatg tggagcaagg aacgggcctc cggtggggcg aacattagcg catgatcccg
     1501 cgaagtggag gccaccttcc cgaggagatc gggcgggacc agggactagc gcggggtcgc
     1561 tccgatttga agccgtcctg atctaccggc gggagggggg aggggcaagc cgcagacgct
     1621 caacgcctga cctgaaaatg gatgtggtcg tcgtgccgcg ccgcgcggca gccctggaaa
     1681 ccaatcaacg gtgaggcgac cgcgaggcgc ctgaccagat gcggctcgac aaacacccgc
     1741 tccacgccgt ggcgtgggcc ttccgacacg agccaggcca gcgccgcccg cgtccggtcc
     1801 ggctcgatcg gcctgtcggg aaaaaagcct tgcaggaagg tcaggtccca tcgcagcgat
     1861 agccacgcgg gcccggagca gggcagggga tcgccctccg tcggcgtctc gaaggcccag
     1921 tagccgatcg gcgaacgcag cctgcccgga aggtaggtgc cgtcgggcgc ggcgtaataa
     1981 aaggccaggt cgagcttgcg gccgtcgttg tgcgacaggt gcggcagcag cggaaagcca
     2041 tcgaggaacg ggaaattgcc gtcgaggaac agggtgacgg tgccgggata ggcccgatcc
     2101 agatccgcgg acatgcgcgt gagcaagggc aggaggcgcg cgtccacata atgtcggttg
     2161 aggacgcaat acagaaggtg cccggcctgg aacgggcggc cagcctcggc ccgacacggc
     2221 agcggcaccc tgccgccgag tgccgcaacg ggtggcacga ccagacacga gagcgcgcca
     2281 taagcggcga cgaagagggc ggccatgagc ccgccccgga tcagccgagg ccggtgggcc
     2341 gccgcatgcg tccggccggc gagccatgac acgaggagcg cgatccctcc gatttgggtc
     2401 aacaccgtca gggtgatgaa ggcgagaacc ccggatgtaa ggcgcgtggc gcggcggatc
     2461 atgccgctgc cctatatcac gcgcccgggc ttagacgggc ggggctgcct cgcgcctccg
     2521 gcgccacgcc cacgctccga agacgccgac cagcgtgagc gcgagcccga accaggtcag
     2581 ggcgtattgc aggtggttgt tggggatcga gaggcgggtc tggcccggcc tcggccagcc
     2641 ggtggcgttc gccaccgggg cggcatcgac ccagaacggc gccacgcgct cgagcccgcg
     2701 cgcctgcgcc attgcggcga ggtcgcgcgt gaaccactgc tcgagctcgg gcttgttctc
     2761 gggcatgaac cagccgcgcg gttccggcgc gcgcatcagc ccggtcacgg cgacggtgct
     2821 gccggcctgc gtctcgggcc gccgcgccgg atcgcgcaac tcgcccggga taaagccgcg
     2881 gttcagcatc acgacgccac cacttgcgag ccgcaccggg gtgaaaacgt aaaagccctg
     2941 cagcggcgag ccccgttgcc ccgacatgag gccgtgaacg agcacctcct tgtcgtgcag
     3001 ggccgtcccg gtcaggcgca cggcgcggaa ctcgtcatcc tccgcacgcc actcgggcca
     3061 gcgcggctcg ggaacgatgg cgtccggctc gccgtgcgcg cgcatgtcga tgcgggccac
     3121 aagatcctgc ttccaggcca tgcgctcgag ttgccagacg ccaagcgcga tcaggatcgc
     3181 gagggccgcg agcgtggaaa tgccggggat cagcagagtg cggaaacgct ggggcatgcc
     3241 aggacatcaa cgcgtggcgt gcgccgccga cgtcgctgtc atctccgacg cccggaactg
     3301 ccaccggccg tcgggctcgg agccgtgatg ataggcgtag cctcggccat gaacatcact
     3361 cggtcggggc tccggacggt tttctcggtt cgatcgtgaa gcgggcctct tcagccttgt
     3421 tgatatactg gctggcgacc agcgcggctt tcaggaagcg tagcggcgga acgcagagcg
     3481 cgaa
//
LOCUS       DATAIQ010000063         2522 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_2974, whole genome shotgun sequence.
ACCESSION   DATAIQ010000063 DATAIQ010000000
VERSION     DATAIQ010000063.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2522)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2522)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2522
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2974"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1..521
                     /locus_tag="VHN20_01000"
                     /pseudo
     CDS             1..521
                     /locus_tag="VHN20_01000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015928581.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
     gene            complement(534..1502)
                     /locus_tag="VHN20_01005"
     CDS             complement(534..1502)
                     /locus_tag="VHN20_01005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014498479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HEX2724376.1"
                     /translation="MPTRVSLAAAIAVACSVAAMPPAFAQDIQERTIRWGHLNNTDHP
                     VSLGVKKFSEIVTAKSGGKIKIREFPSNQLGSEMQQQAALRGGTQEMQSPATTSLVGI
                     VKEFGLIDLPFIVSTTAQADALLDGPLGTALLAKLPEKDLIGLAYWDLGFRNVTNSRR
                     PITKGEDLSGIKLRVIPNPVYLETFKTFGANPVPMSFTELYTALETRTVDGQENPFSV
                     ILSNKFYEVQKYLSATNHTYSTNIILVSKKFWDRLSPTEQKILQEAAIEARDYQRKVS
                     REQADKAVAELKAKGMQGRHLPALRDFMFEPCGLLCFPHARLGSGK"
     gene            1659..2348
                     /locus_tag="VHN20_01010"
                     /pseudo
     CDS             1659..2348
                     /locus_tag="VHN20_01010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007627313.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
BASE COUNT          407 a          818 c          855 g          442 t
ORIGIN      
        1 ccggcgagcc gccgaccatc gaggccgtct cggcgctctt cgacacgctg ttcttcgaca
       61 aggagcgcta cgacctctcc gccgtcggcc gcgtgaagat gaacatgcgc ctcgacctcg
      121 acgcgccgga tacgcagcgg acgctccgcc gcgaggacat gctcgcggtg accaaggcgc
      181 tcgtcgacct gcgcgacggc aagggcgaga tcgacgacat cgaccatctc ggcaaccggc
      241 gcgtgcgctc ggtgggcgag ctcatggaga accagtaccg cctgggcctc ctgcgcatgg
      301 agcgcgccat caaggagcgc atgtcggcgg tcgatatcga cacggtgatg ccgcaggatt
      361 tgatcaacgc caagccggcg gcggcggcgg tgcgcgagtt cttcggctcg tcgcagctgt
      421 cgcagttcat ggaccagacc aacccgctgt cggaagtgac gcacaagcgc cgcctgtcgg
      481 cgctcggtcc gggcggcttg acgcgcgagc gcgccggttg gaccgtagtg cgttcatttc
      541 ccgctcccca ggcgagcgtg agggaagcag agcaatccac agggctcgaa catgaagtcg
      601 cgcagcgccg gcaggtgccg cccctgcatg cccttggcct tgagctcggc gacggccttg
      661 tcggcctgct cccggctgac cttgcgctgg tagtcgcgcg cctcgatcgc cgcctcctgc
      721 aggatcttct gttccgtcgg tgaaagcctg tcccagaatt tcttcgagac caggatgatg
      781 ttcgtgctgt aggtgtggtt ggtggcgctg aggtatttct gaacctcgta aaacttgttg
      841 gagaggatca ccgagaacgg gttctcctgg ccgtcaaccg tccgggtttc caacgcggtg
      901 tagagctcgg tgaagctcat cggcacgggg ttcgcgccga acgtcttgaa cgtctcgaga
      961 tagaccgggt tggggatgac gcggagcttg atgccgctca gatcctcgcc tttggtgatc
     1021 ggccgccggc tgttggtgac gttgcggaag ccgaggtccc aataggcgag cccgatcagg
     1081 tccttttcgg ggagcttggc aaggagcgcg gtcccgagcg gcccgtccag caacgcgtcc
     1141 gcctgggccg tcgtgctgac gatgaagggc aggtcgatca ggccgaactc cttgacgatg
     1201 ccgaccagcg acgtggtggc gggcgactgc atctcctgcg ttccgccgcg cagcgccgcc
     1261 tgctgctgca tctcgctgcc gagctggttc gacgggaatt cccggatctt gatcttgccg
     1321 ccgctcttgg cggtgacgat ctcgctgaac ttcttcacgc cgaggctgac cggatggtcg
     1381 gtgttgttga ggtggcccca gcggatcgtc cgctcctgaa tgtcctgggc gaaggccggc
     1441 ggcattgccg ccaccgagca cgcgacggcg atggccgccg ccaatgagac gcgagttggc
     1501 actggttccc tccctctgcc gatcccgcct tatcccgcgg cgctcttcga gaatcaacag
     1561 gtaaaacata tttcatctga cattcgaagt atcaccggcc gaaagcttat ttagcaggct
     1621 gtcttgccag cccccaccga gcatgcgagt ttcggcgcat gagccagctg cggacatttt
     1681 ccgaggatca tcctccaggg ccggaaacgg tgggggaggt cgcttatcgc cgtctgcgcg
     1741 ccgacatcgt cttcggccgc ctcgctccgg gcgaaaaact gcgcttggac cgcgtcagcc
     1801 agcgctacac gaccagcgtc agcacgatgc gcgagctgct gagccggctc acctcggagg
     1861 ggttgatcgt ggccgagggc cagcgcggct tcgaggtcgc gccggtgtca ccggaggatt
     1921 tccgcgaggt cgcggcgatg cgccagctgc tcgaatgcca tgccatcgag cagtccttcg
     1981 ccgccggcga cctcgactgg gaagcgcgcg tcgtcggggc tcatcacaag ctggccgcgc
     2041 acgagaagcg catggtcacc ggcgaggatg cgagcccgga atcgtggaag cggtgcgact
     2101 gggaattcca ccatgccctg atctcggcgt gcggatcgaa ggtgctgatg cagacgcatg
     2161 ccgccatcta cgaccgctat cttcgctacc agatggtggc ggtgattttc cggggcgagg
     2221 tggcggcgcg cgagcaccag gccctgctgg actgcgccct ggcgcgcgac gcggcagccg
     2281 cgcgggcggt gctggtcacg catatccaga gctgcgtcga gcacgcgctg gccggcgaca
     2341 cgagccggtg gctgcgcccg tccgaaagcc ggcgcaaggg caccgaggcc gtcgccgccg
     2401 ggcgcagcct cgacgcgtcc ggcgggcgca agatcccccg ctcgcgcgac gcgggccgcg
     2461 gccgccgcaa aggaattcag gggaaggcca tatcaagctg accgggacgc atcttccgat
     2521 gt
//
LOCUS       DATAIQ010000064         2643 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_418712, whole genome shotgun sequence.
ACCESSION   DATAIQ010000064 DATAIQ010000000
VERSION     DATAIQ010000064.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2643)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2643)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2643
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_418712"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..682)
                     /locus_tag="VHN20_01015"
     CDS             complement(<1..682)
                     /locus_tag="VHN20_01015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011798696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraX family protein"
                     /protein_id="HEX2724377.1"
                     /translation="MKALRIPDGTVEALKWLALVLMTGDHVNKYLFNATLPVLFEAGR
                     VALPLFVFVLAYNLARPGTLERGVYGRTMSRLAMFGALASVPFVALGGLYAGWWPLNV
                     MFTLLVVTATAYLVERGGKLHLAAAGVVFLVGGSSVEYWWPAVAFGLAVWSYTRRPSW
                     AAAAVAVLACAALWFVNRNLWALAALPVLFLASRVDVRVPRLRWAFYAYYPLHLASLW
                     LIRIPMSKA"
     gene            complement(682..948)
                     /locus_tag="VHN20_01020"
     CDS             complement(682..948)
                     /locus_tag="VHN20_01020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011798697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TrbO"
                     /protein_id="HEX2724378.1"
                     /translation="MDKFHAFMMRYTLGVGRLLQAYCKWAEGQAKNQLDLLLLGLGPI
                     FALGLLLWALPAWIGKPIAFVLSLPALYIIFLVLRAYAIRGGRR"
     gene            complement(977..1612)
                     /locus_tag="VHN20_01025"
     CDS             complement(977..1612)
                     /locus_tag="VHN20_01025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011798698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HEX2724379.1"
                     /translation="MPFFADLPPQLQERVVCSISAAVKYEVPVNIVLAVAEKEGGKPG
                     QWVRNSNGTHDVGPMQFNTAYLGDLARYGITANDVAAAGCYSFDLAAWRLRMHIRNDK
                     GDLWTKAANYHSRTPQYNAVYRADLMRKASKWADWLEARFVTLDVTKAGATPSTPSQP
                     ATVAQRATPAARPAPAPQQAAPAAAAARSVSVAGYVPRTVSFNTSREGSAE"
     gene            complement(1626..2213)
                     /locus_tag="VHN20_01030"
     CDS             complement(1626..2213)
                     /locus_tag="VHN20_01030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010890138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrbM/KikA/MpfK family conjugal transfer protein"
                     /protein_id="HEX2724380.1"
                     /translation="MKKKLFALAALVAALGSTAGTASAQDVLTGDTRLACEAILCLSS
                     GTRPSECTPSLSRYFNITKRKLSDTIRARLNFLQLCPVASQTPEMQSLVSAISRGAGR
                     CDAQSLNSTLVMWTGGYDDGRTYISNQLPDYCGAYTGHAYTDFASSGTLPRYVGTPER
                     GGYWVEARDYDRALAEYNERIRREDEERRRQSWLN"
     gene            complement(2231..>2643)
                     /locus_tag="VHN20_01035"
     CDS             complement(2231..>2643)
                     /locus_tag="VHN20_01035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020206003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="P-type conjugative transfer protein TrbL"
                     /protein_id="HEX2724381.1"
                     /translation="NEPKPAGGAGQGQQAAPGSTGPGLLASAASALGTAGRIAADAGA
                     NLAKGTADVAKAKAASLREAAAERIADTTGGKIAAAIKAQGSGTAENIDVPDQQPAPS
                     FGDNSLAGGPADADPESEVAAFANREQGRDGTTA"
BASE COUNT          420 a          899 c          911 g          413 t
ORIGIN      
        1 cggccttgct catggggatg cggatcaacc agagcgaggc caggtgcagc gggtaatagg
       61 cgtagaaggc ccagcgcagg cgcggcacgc gcacatccac ccgcgaggcc aggaagagca
      121 ccggcagggc tgccaaggcc cacaggttgc gattgacgaa ccacagggcc gcgcaggcca
      181 gcaccgcgac cgccgcggcg gcccagctcg gccggcgcgt gtacgaccac accgccaggc
      241 cgaaagccac ggccggccac caatattcga ccgagctgcc gccgaccagg aacaccacgc
      301 cggcggccgc caggtgcagc ttgccgccac gttcgaccag gtaagccgtg gccgtgacga
      361 ccagcagcgt gaacatcacg ttgagcggcc accaaccggc gtacaggccg ccgagggcca
      421 cgaagggcac ggaggccagc gcgccgaaca tcgccaggcg cgacatggtg cggccgtaca
      481 cgccgcgttc gagcgtgccc ggccgggcca ggttgtaggc caggacgaac acgaaaaggg
      541 ggagcgccac gcggccggcc tcgaacagca ccggcagcgt cgcgttgaac aggtacttgt
      601 tgacgtgatc gccggtcatg agaaccagtg cgagccactt caacgcttcg acggttccat
      661 caggaatccg cagggccttc atcagcgccg gcccccgcga atcgcgtagg cgcgcagcac
      721 caggaagatg atgtagagcg ctggcagtga gagcacgaag gcgatgggct tgccgatcca
      781 cgccggcagc gcccacagca gaaggcccaa ggcgaagatc gggccgaggc ccagcagaag
      841 caaatcgagc tggttcttgg cctgcccttc cgcccacttg caataggctt gaagcaaccg
      901 gccgacgccc agcgtgtacc gcatcatgaa ggcgtggaat ttgtccatgt ttagccgcta
      961 aatcggaaga gccggcctac tcggccgacc cctcgcgtga agtgttgaaa gacaccgtgc
     1021 ggggcacgta gccggccacc gacacgctgc gagctgctgc ggccgctggg gcggcctgct
     1081 ggggtgctgg tgccggcctg gccgccggcg tcgcccgctg ggccaccgtc gcgggctggc
     1141 tgggcgtcga gggcgtggcc ccggccttcg tcacgtcaag cgtgacgaac cgagcttcga
     1201 gccaatcggc ccacttcgac gccttgcgca tcaagtcggc ccggtacacc gcgttgtact
     1261 gcggcgtgcg cgagtggtag ttcgccgcct tcgtccagag gtcgcccttg tcgttgcgga
     1321 tgtgcatccg cagccgccag gcggccaggt cgaacgagta gcagccggca gccgccacat
     1381 cgttcgccgt gatgccgtat cgggccaggt cgcccaggta cgcggtgttg aactgcatcg
     1441 ggccaacgtc atgcgtgcca ttcgagttgc gcacccactg gcccggcttg ccgccctctt
     1501 tctcggcgac ggccaacacg atgttgaccg gcacctcgta cttgacggcg gccgagatcg
     1561 agcagacgac gcgctcctgg agctgcggcg gcagatcggc gaagaacggc atgccctccc
     1621 ctccctcagt tcagccagga ctgacggcgg cgctcttcgt cctcgcgccg gatgcgttcg
     1681 ttgtactcgg ccaaggcgcg gtcatagtcg cgcgcttcga cccaataccc gccccgctct
     1741 ggcgtcccga catagcgcgg cagcgtgccg ctgctggcga agtcggtgta ggcgtggccg
     1801 gtgtaggccc cgcagtagtc aggcaactgg ttgctgatgt acgtgcgccc atcgtcgtag
     1861 ccgcccgtcc acatcaccaa cgtcgagttc agcgactgcg cgtcgcaccg gccagcgccg
     1921 cgcgagatcg ccgacacgag cgactgcatt tccggcgtct ggctcgccac cgggcaaagc
     1981 tggaggaagt tcaggcgggc gcggatcgtg tccgacagct tgcgcttcgt gatgttgaag
     2041 taccgcgaca gcgacggcgt gcattcgctc gggcgcgtgc ccgacgacag gcacaggatc
     2101 gcctcgcagg ccaggcgcgt gtcgccggtc agcacgtctt gcgcgctggc cgtgccggcg
     2161 gtcgatccga gggctgccac gagggcggcc agggcaaaca gtttcttctt catggttgga
     2221 ctctccttgg ttacgcagtt gtgccgtcgc ggccttgctc gcggttggcg aacgcagcta
     2281 cttcggactc gggatcggca tcggcagggc cgcctgccag gctgttgtcg ccgaagctcg
     2341 gcgcgggctg ctggtcgggc acgtcgatgt tctcggccgt gccgcttcct tgcgccttga
     2401 tcgcggcggc gatctttccg ccagtggtgt cggcgatccg ctcggctgcg gcttcgcgca
     2461 ggctcgcggc tttggccttg gcaacatcgg cggttccctt cgccaagttc gcgccggcgt
     2521 cggcggcgat gcggccggcc gtgccgaggg ccgatgcggc cgatgcgagc aagccggggc
     2581 cggtgctgcc cggtgcggcc tgctgccctt gccctgcccc gccggcgggc ttgggttcgt
     2641 tct
//
LOCUS       DATAIQ010000065         3450 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_140141, whole genome shotgun sequence.
ACCESSION   DATAIQ010000065 DATAIQ010000000
VERSION     DATAIQ010000065.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3450)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3450)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3450
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_140141"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..152)
                     /locus_tag="VHN20_01040"
     CDS             complement(<1..152)
                     /locus_tag="VHN20_01040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007558408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhzF family phenazine biosynthesis protein"
                     /protein_id="HEX2724382.1"
                     /translation="MSRRFVTLDVFTRHQLAGNQLAVVLDSDGLDDARMQAIAREFNL
                     SETVFV"
     gene            complement(272..1411)
                     /locus_tag="VHN20_01045"
     CDS             complement(272..1411)
                     /locus_tag="VHN20_01045"
                     /inference="COORDINATES: protein motif:HMM:NF015338.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HEX2724383.1"
                     /translation="MRLRVATFNVENLVSRNRYGARDRPDTAPALSLFDFPQGEAREN
                     AERSVAVALEDDKRQMTALAIAETRADILALQEVDNLGVLAPFFANYVHTCSDIRYGH
                     QRLVEGNDRRGIDVAFAARRDLVPDEKAVKVRSHHEATFGELDLLNDDLREFGIGPDD
                     RVFNRNCLEVTLTWPDRDLTVFVCHMKSMDHWRPEGRSFTNKIRAAEARAVRRIVEQK
                     FGAGWRDASWIVAGDFNDFRARILAGGGVEPALPSGIDPLFQDFAVDPVAQLPPLERW
                     TYFHRGRDDREGDAAGQHVQLDYLLLSPALAKTNPSPPIEIIRRGLPYRAPLDPAAPD
                     RSIGYLATRADRYPRVGWDRPKASDHCPVVVEIEVPVRGAVGSRQ"
     gene            complement(1689..2537)
                     /gene="pdxY"
                     /locus_tag="VHN20_01050"
     CDS             complement(1689..2537)
                     /gene="pdxY"
                     /locus_tag="VHN20_01050"
                     /EC_number="2.7.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003597787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008478 - pyridoxal kinase activity
                     [Evidence IEA];
                     GO_process: GO:0009443 - pyridoxal 5'-phosphate salvage
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal kinase PdxY"
                     /protein_id="HEX2724384.1"
                     /translation="MNVLSIQSHVVYGHVGNAAATFPMQRLGVEVWPLHTVQFSNHTG
                     YGAWTGRVFDGPMIEELVDGISARGALATCDGVLSGYMGSADIGSAILGAVQKVRAAN
                     PRALYCCDPVIGDVGRGVFVRPGIPEFMRAHAVPAADIVTPNQFELDYLSDMTTETLA
                     DAKRAVGAVQRLGPRAVLVTSLHTRETPQDAIDLLTGEGGEFWRVRTPRLSLTANGAG
                     DAIAALFFVHYARTGSAAAALAEAAASVYGLLKRTVDAGSREILLVAAQDEFVAPTKR
                     FPVERV"
     gene            2847..3389
                     /locus_tag="VHN20_01055"
     CDS             2847..3389
                     /locus_tag="VHN20_01055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009799524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HEX2724385.1"
                     /translation="MDVEHLRTTVLDFVRAHESWAPFVVAFLAFGESLAVISLFFPAT
                     VLLVAVGAGMDATDLKFWPLWLGAAAGAALGDWVSYEVGRYFEDRAHNVWPLNRYQHL
                     IAKGEEFTRKYGVWAIFLGRFFGPARAFVPLAAGIFEMARAPFQFANVTSAVLWAFIL
                     LQFGDVVGETAGAVWSAFRG"
BASE COUNT          527 a         1159 c         1219 g          545 t
ORIGIN      
        1 aagacgaaga ccgtctcgga caggttgaac tcgcgcgcga tcgcctgcat gcgcgcgtcg
       61 tcgagcccgt ccgaatcgag caccaccgcg agctggttgc cggcgagctg gtggcgcgtg
      121 aacacgtcga gggtgacgaa acggcgggac atgattttcc tttcggcagt cggcagccgg
      181 caatcggcag tcggcagtcg gaattgaggg accaccgatg gcctgctgcc tcgaccggga
      241 gacagggatt atagcggtca tcaccgactg cctactggcg actgccgact gccccacgca
      301 caggaacctc gatctccacc accacggggc aatggtcgct cgccttgggg cggtcccatc
      361 cgaccctcgg ataacggtcg gcgcgggtcg cgagatatcc gatcgagcgg tcgggcgcgg
      421 cgggatcgag cggcgcgcga tacggcaggc cgcggcggat gatctcgatc ggcggcgacg
      481 gatttgtctt ggccagcgcc ggcgacagca gcaggtagtc gagctgcacg tgctggccgg
      541 ccgcatcgcc ttccctgtcg tcgcggccgc ggtggaagta agtccagcgc tcgagcggcg
      601 gcagctgggc gacgggatcg acggcgaaat cctggaacag cgggtcgatg ccgctcggca
      661 gcgccggctc gacgccgccg ccggccagaa tgcgcgcgcg gaaatcgttg aagtcgccgg
      721 cgacgatcca gctggcgtcg cgccagccgg ccccgaattt ctgctcgacg atgcggcgga
      781 cggcgcgcgc ctcggcggcg cggatcttgt tcgtgaagct gcgaccctcc ggccgccaat
      841 ggtccatcga cttcatgtgg cagacgaaga ccgtgaggtc gcggtcgggc caggtcagcg
      901 tcacctcgag gcagttgcgg ttgaagacgc ggtcgtcggg gccgatgccg aactcgcgca
      961 ggtcgtcgtt gaggaggtcg agctcgccga aggtggcctc gtgatgcgag cgcaccttga
     1021 ccgccttctc gtcgggcacg aggtcgcggc gcgccgcgaa ggcgacgtcg atgccgcgcc
     1081 ggtcgttgcc ctcgacgagg cgctggtggc cgtagcggat gtccgaacag gtgtggacgt
     1141 agttggcgaa gaacggcgcc aggacgccga ggttgtcgac ctcctgcagg gccaggatgt
     1201 cggcgcgggt ctcggcgatg gccagcgccg tcatctgccg cttgtcgtct tcgagcgcca
     1261 cggcgaccga gcgctcggca ttctcgcgcg cctcgccttg cgggaaatcg aacagcgaca
     1321 gcgccggcgc cgtgtcgggc cggtcgcgcg cgccgtaacg gttgcgcgag acgaggtttt
     1381 cgacgttgaa ggtggcgacg cgcaggcgca tcaacccctc tccccgcgcg caagtcgggt
     1441 gttcccgact tgcgcgcctt tcatgcggat ctcgggcgag cccgagatcc gtacgggaag
     1501 aggcgagtcg cacgcaagtc ggctgttgct gatttgcgca tgcaatgcgg aactcgggca
     1561 agcccgagtt cccaagcgcg accgggtgag ggggcagatc cgaaagagac tcattctgag
     1621 gcgccccctc acccggtcgg ctcgctgccg ctcgccgctc gacctctccc cgcaagcggg
     1681 gcgaggtttt aaacgcgctc gaccggaaat cgtttcgtcg gggcgacgaa ctcgtcctgg
     1741 gccgcgacca ggaggatctc gcgcgagccg gcgtcgacgg tgcgcttgag cagaccgtag
     1801 accgacgcgg cggcctcggc gagcgcggcc gcggccgagc cggtgcgcgc gtaatgcacg
     1861 aagaacaggg cggcgatggc gtcgccggcg ccgttggcgg tgagcgacag ccgcggcgtg
     1921 cgcacgcgcc agaactcgcc gccctccccg gtcaggagat cgatcgcgtc ctgcggcgtc
     1981 tcgcgcgtgt gcagcgacgt caccagcacg gcgcgcgggc cgagcctctg caccgcgccg
     2041 accgcgcgct tggcgtcggc gagcgtctcg gtcgtcatgt cggacagata gtcgagctcg
     2101 aactggttcg gcgtgacgat gtcggccgcc ggcaccgcgt gggcgcgcat gaattccggg
     2161 atgccggggc gcacgaacac gccgcggccg acgtcgccga tcaccgggtc gcagcaatag
     2221 agcgcgcgcg ggttggcggc ccgcaccttc tgcaccgcgc cgaggatggc gctgccgatg
     2281 tcggccgagc ccatgtagcc ggacaggacg ccgtcgcagg tcgcaagcgc gccgcgagcg
     2341 gagatgccgt cgaccagctc ctcgatcatc ggcccgtcga agacgcgccc cgtccaggcg
     2401 ccgtagccgg tgtggttcga gaactgcacg gtgtgcagag gccacacctc gacgccgagc
     2461 cgctgcatgg gaaacgtggc cgcggcgttg ccgacatggc cgtagacgac atgggattga
     2521 atcgaaagca cgttcatggc ggccaacgag taatgcattt tgattcgcag ttcatccctc
     2581 cccttcaggg tagggcggac tcggatgcgg cagcatccga gccgggtggg gtcatggcgc
     2641 gaagcgccat tttctgcacc gccgttgccc taccccggtc gcaccgaact cgggctcgcc
     2701 cgagttcggc attacatgcg caaatcggca atagccgact tgcgtgcgac tcggccctca
     2761 cgtgaaggcg agggatgagc gcgcgccgca ccttgcaaac gacggcgccg gcccccacaa
     2821 cagcgggccc acctggatcc tcccgcatgg atgtcgaaca ccttcgcacg acggttctgg
     2881 atttcgtgcg cgcgcacgaa tcatgggcgc cgttcgtcgt cgcgttcctg gccttcggcg
     2941 aatcgctcgc ggtcatctcg ctgttcttcc cggcgaccgt gctgctcgtc gccgtcggcg
     3001 ccggcatgga cgcgaccgac ctgaaattct ggccgctgtg gctcggcgcg gcggccggcg
     3061 ccgcgctcgg cgactgggtc tcctacgagg tcggccgcta cttcgaggat cgcgcccaca
     3121 atgtgtggcc gctcaaccgc taccagcacc tgatcgccaa gggcgaggag ttcacgcgca
     3181 aatacggcgt ctgggcgatt ttcctcggcc gcttcttcgg gccggcgcgc gccttcgtgc
     3241 cgctcgccgc cggcatcttc gagatggcgc gcgcgccgtt ccagttcgcc aacgtcacct
     3301 cggccgtgct ctgggccttc atcctgctcc agttcggcga cgtcgtcggc gaaaccgccg
     3361 gcgccgtgtg gtcggcgttc cgggggtgac gcggcagcac gcagcccttg tcattccggg
     3421 gcgacgcgaa gcgtcgagcc cggaacccat
//
LOCUS       DATAIQ010000066         8552 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_418826, whole genome shotgun sequence.
ACCESSION   DATAIQ010000066 DATAIQ010000000
VERSION     DATAIQ010000066.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 8552)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8552)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8552
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_418826"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1251)
                     /locus_tag="VHN20_01060"
     CDS             complement(<1..1251)
                     /locus_tag="VHN20_01060"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX2724386.1"
                     /translation="MRIPPLIKRNTALFALSQSFTGAGMQFAYGLGPLMVTALTGSAR
                     LAGLSVALIGLSRFLVAYPIGKVTDALGRKPGILIGLTLAMFGAIVVGLSMSIQSIAM
                     LIGGMLLFGMGMNAAQQLRVAATDMFPPHLRAQALGYVALGSLAGLVISPPMVTHAES
                     IAHGLGQDPLGLPWLLLPALIVPGMVLVTLVRPDPKEIGMNLERYYPDYTAPPRRSAG
                     QQPVFRAGRLLRMRATRLAIVSNCAAQGNMSIIMVLTSLVLAHHGHSLGAIALSHVFH
                     TVGMFAFTIPLGRLADRLGRNKVMLPGIAITLVGAAFVALAEGYVGVTLGTFLVGLGW
                     AAANVAATALIADHAETAERGRAIGLSDSFAGGTSVFAALVTGPLIDWYGLSAAGLTA
                     VLLALVPLVMAAVSKFERPADAAGS"
     gene            1441..1614
                     /locus_tag="VHN20_01065"
     CDS             1441..1614
                     /locus_tag="VHN20_01065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013165403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724387.1"
                     /translation="MGVTADQQAQSHRSSRSAPLILAGAGLCLVVAGLLLWWRHGPAV
                     FNDFVLTALAWCF"
     gene            2208..2480
                     /locus_tag="VHN20_01070"
     CDS             2208..2480
                     /locus_tag="VHN20_01070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724388.1"
                     /translation="MTTSIAWHKGAEPAASRDELKSEIRRVLKALADVDVRCQTDRAN
                     LEKWMGVEGARKFSARIEAHRRGERQKLVLRLADLHERMAETLVGA"
     gene            2662..3495
                     /locus_tag="VHN20_01075"
     CDS             2662..3495
                     /locus_tag="VHN20_01075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003600951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HEX2724389.1"
                     /translation="MQLRLLALVCLLLTAVAAHPAAAQGVAIPNFWDPRARLERPDLT
                     GLRTVRFLTDDEFPPLHFAGPDGSPTGFSVELARAACERLAITCTIQARRFDTLLDSL
                     AEGRGDVVAAAVPIRAELRRRFSITLPYFRTPARFAALKDRVLEPGPQALDGRAVGVV
                     AGTAHEAYFTTFFPRAAAKTFATLGAATAALRRGEVEYVFGDGLGLALWVGGTDAAGC
                     CNLTGGPYLESRFFGEGIGFLLRKEDENLRRALDFALQRLWEEGRYAELYLRFFPVSP
                     F"
     gene            3677..5404
                     /locus_tag="VHN20_01080"
     CDS             3677..5404
                     /locus_tag="VHN20_01080"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012455031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA];
                     GO_function: GO:0004824 - lysine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006430 - lysyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HEX2724390.1"
                     /translation="MNRPLTVDPALAEAARTATAWPFEEARKLVERLKRTGKTEALFE
                     TGYGPSGLPHIGTFGEVARTSMVRHAFRVLTEDRIPTRLFAFSDDLDGLRKVPDNIPN
                     KEMVARYLNKPLTEVPDPFGTHESFGHHNNARLRAFLDAFGFDYEFLSATQCYRSGRF
                     DATLLKVLERYEAVMAIMLPSLREERQQTYSPFLPIHPKTRDVMQVPIDEVKRDAGTI
                     VWRDPHSGERFETPVTGGHAKLQWKPDWAMRWVALGVDYEMAGKDLIDSVKLSGEIAR
                     VLDGLPPEGFNYELFLDDKGQKISKSKGNGLTIDEWLAYGTPESLALFMYNKPREAKR
                     LYFDVIPRHVDDYLTFLEKFPQQDAKAQLASPVWHIHAGAPPAPELVSPSAARPGTTI
                     SFAMLLNLVAVANSEEPAVLWGFIRRYAPEVSPETHPRLDRLVGHAVRYFRDFVRPAK
                     TYRLSNEAERQALAQLADALRPLEGSTDAEALQAIVYEIGRAHFPDTSGKSKSPDGRP
                     GVSQTWFATLYQILLGQERGPRFGSFVALYGVAETCALIAKALSGDLVREHEAFLLAR
                     GANQQLEPA"
     gene            complement(5406..6038)
                     /locus_tag="VHN20_01085"
     CDS             complement(5406..6038)
                     /locus_tag="VHN20_01085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012253605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEX2724391.1"
                     /translation="MLNHARIWTAIDRLAERYGLSASGLARKAGLDATSFNRSKRTSP
                     DGRDRWPSTESVSKILNATGASLDEFMRLVDPGVGQARTMIPLIGLTQAGAGRFFTDE
                     GMPAGGAGWEEVEFPDLSNEKVFALEVQGDSMQPLYRDGDVLIVSPTANVRKGDRIVV
                     RTKGGEVTAKELKRRTAKSIELRSLNTEHPDRVIPTNEIAWMARVMWARQ"
     gene            6323..6661
                     /locus_tag="VHN20_01090"
     CDS             6323..6661
                     /locus_tag="VHN20_01090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012453966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF952 domain-containing protein"
                     /protein_id="HEX2724392.1"
                     /translation="MTLVYKICPEPMWREAERAGVFSGAPVDVRDGFIHFSTAAQVAE
                     TAAKHFAGLTDLLLVAVDAEALGKGLRYEPSRGGDLFPHLYGPLLLAAVRWVKPLPLG
                     AGGRHVLPVL"
     gene            complement(6685..6939)
                     /locus_tag="VHN20_01095"
     CDS             complement(6685..6939)
                     /locus_tag="VHN20_01095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6460 domain-containing protein"
                     /protein_id="HEX2724393.1"
                     /translation="MQDFLGGPLWSVLIKLIFLSLLVGALLAFLDVTPLGLFDHVVYL
                     VRSVFGLGFETLRDLGRWVLYGAVIVVPIWLVSRLFRSRR"
     gene            7106..8074
                     /locus_tag="VHN20_01100"
     CDS             7106..8074
                     /locus_tag="VHN20_01100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011083667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEX2724394.1"
                     /translation="MQSRLYALAVLCLTLALPGAAAVAQDYPNRPIRWIVPYPPAGTT
                     DVLARIMGDYLSRKMGQQFIIDNRPGAGNNIGTEAVVSAPPDGYTVLLVNPANGINAT
                     LYKKLPFNFIRDIAPIGGLIRVPNVMEINPDVPAKTVAEFIAYAKANPGKINMASSGL
                     GTSVHLSGELFKAMTGVQMVHVPYRGAGPALTDLMTGQVHVLFDNLPSSVEHIRAGKL
                     RALAVTTDKPTPALPGVPTVAETVPGYEASAWFGMGAPKDTPRPIIERLNREINAALR
                     DPEMQKKLADLGGTIMPGTPEDFGKVIAEETEKWRKVVEFSGAKLE"
     gene            complement(8096..>8552)
                     /locus_tag="VHN20_01105"
     CDS             complement(8096..>8552)
                     /locus_tag="VHN20_01105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012330603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX2724395.1"
                     /translation="YLRAQFPQVPVVIVSAHEDVAVIRRALEFGASGFVPKSLTIDQI
                     GSALTTILSGGTWTPPDVDLSAPDDQEIAELLRGLALLTPQQVRVLMMLSEGLLNKQI
                     AYELGVSEATVKAHVSAILQKLRVDSRTQAVIAASKIGAVIKPPTTVLE"
BASE COUNT         1461 a         2842 c         2815 g         1434 t
ORIGIN      
        1 cgaacctgcc gcgtcagccg gccgctcgaa tttcgatacg gccgccatca cgagcggcac
       61 cagcgccagc agcactgcgg tgagaccggc agcggatagg ccgtaccaat cgatcagcgg
      121 gccagtgacg agcgcggcga acacgctcgt gccgccggcg aagctgtcgc tgaggccgat
      181 ggcgcgccca cgttccgccg tctcggcatg gtcggcgatc agcgccgtgg ccgcaacatt
      241 ggcggcagcc cagccgagcc cgaccaggaa cgtgccgagc gtgactccca catacccctc
      301 cgcaagagcc acgaaagcgg cgccgacaag cgtgatcgcg atgccgggaa gcatcacttt
      361 gttgcgtccg aggcggtcgg cgagacgtcc gagcgggatc gtgaaggcaa acatgccgac
      421 cgtgtgaaac acgtgcgaca gggcgatcgc gccaagcgaa tgaccgtgat gggcgaggac
      481 cagcgaggtc agcaccatga tgatcgacat gttgccctga gcggcgcaat tcgagacgat
      541 cgccagccgc gtcgcgcgca tgcgcagcag tcggcccgcg cggaaaacgg gttgttggcc
      601 cgccgagcgg cgcggcggcg ccgtgtaatc gggatagtag cgctcgaggt tcatcccgat
      661 ctccttggga tctgggcgca ccaacgtgac gagtaccatg ccggggacga tcaatgcggg
      721 cagcagcagc cagggcaacc cgagtggatc ctggcccagg ccgtgcgcga tggattctgc
      781 gtgggtcacc atcggcgggc tgatcacgag gccggcgagc gaccccaagg ccacgtagcc
      841 gagcgcctgc gcgcgcaggt gcggcggaaa catgtcggtg gccgccaccc gcaactgctg
      901 ggcggcgttc atgcccatgc cgaacagcag catgccgccg atcagcatgg cgatgctttg
      961 gatgctcatc gacaatccga ccacgattgc gccgaacatc gccagggtca gcccgatcag
     1021 gatgccgggc ttgcggccca aggcgtcggt gaccttgccg atcgggtagg cgaccaggaa
     1081 gcggctgagg ccgatcaggg cgaccgacag ccccgccagc cgggcagatc cggtcagcgc
     1141 cgtcaccatc aggggaccga gcccgtaggc gaactgcatg cccgcgccag tgaacgattg
     1201 cgacagcgcg aacagggcgg tgttgcgctt gatcaggggc ggaatgcgca tgctgtgaag
     1261 ttacttacga gggagtgagg ccggagccga aggcgtgcgg ctatagcccg gtccgagcct
     1321 ggcgccaaac cgtgaggcct tgccgtcgca cgggtttgac ggctttgaca acgcgcatta
     1381 gctaaaagga gcaaggaaaa ccggcggccg atcccgccgc atggcattta aggggcgcgt
     1441 atgggcgtca ctgccgatca gcaggcgcaa tcgcaccggt cgagccgctc ggctccgctc
     1501 atcctcgccg gcgccggcct ttgtctcgtc gtcgcaggcc tcctcttgtg gtggcgccat
     1561 ggccccgccg tgttcaacga tttcgtcctc actgccctgg cctggtgctt ctagatcccg
     1621 cttccaggcc gaggctgcac gtcacgccac gcgtcacctc tgagagcgcc cagtcatctc
     1681 tgctgccaag ctactcttat gtgaatgcgg cgcgccgcgc ggcatgctgt ttagaggagc
     1741 ccctctgccc cgtctggcgt tcccctgccg gcggggtttc ttttgtgccc ctcagcctgg
     1801 ccggtcgcaa aaaacctgtg gcttcctgaa cgtcccgtct gccgcgaagc gggccggtag
     1861 cctaacgtca tcggcgcgac ggacctgaac atcgtaggcg gagaacacca ccgacggctg
     1921 agccgccccg gatctgatct gggggatcac acggcaggcc gtgttggagc ggaacactcc
     1981 aatcaccagg cttgatccgg cgaagcggga caccgcttcg ccggatcatg cgtttcgggg
     2041 agctttcgag ccgcgttgct tcaatctgaa cttcaagagc tctcgcatgt cgtcgggcgg
     2101 cttggccgat ctttggtgca caactccgcc gtgctaagct tttcgaaagc gaatcaagta
     2161 gcgacgagct agcttgactc cggagaacaa gagccaaggg ggccgcaatg acgacatcca
     2221 ttgcgtggca caagggcgcc gagcctgccg cctcgcgtga cgaactcaaa tccgagatcc
     2281 ggagggttct caaggcgctt gccgacgtcg acgtgcgctg ccagaccgac cgcgccaatc
     2341 tagagaaatg gatgggcgtg gagggagcac ggaagttctc tgcccgcatt gaagcgcatc
     2401 ggcggggcga gcgccagaag ctcgtgttgc gcctggccga cctgcatgag cggatggccg
     2461 agacgctggt cggcgcttga cgccctaacc gagcccggag caccgcggtt ctgacctgga
     2521 atgaaggctg gagttaaccc tccgccgcga tgccctgcct gtgaccccgt cgcggcccga
     2581 aagggtgagc ggcagtggct tgaccttaaa tcgtcaacga cgatagctcc gggcgctgag
     2641 gctgatggat attgccggat catgcagttg cgccttcttg cccttgtttg cctcctcctg
     2701 acggccgttg cggcgcatcc cgcggcggcc cagggcgtcg ccatcccgaa tttctgggat
     2761 ccgcgcgccc gcctcgagcg gccggacctg accggcctgc gcacggtccg gtttctgacc
     2821 gacgacgaat ttccgccgct gcattttgcc gggcccgacg gcagcccgac gggattttcg
     2881 gtcgagctgg cgcgtgcggc ctgcgagcgc ctggccatca cctgcacgat ccaggcgcgc
     2941 cgtttcgata cgctgctgga ctcgctggcc gaggggcggg gcgacgtggt tgcagcggcg
     3001 gtgcccattc gcgccgaact gcgccgccgc ttcagcatca cgctgccata tttccgcacg
     3061 cccgcacgct tcgccgccct caaggaccgg gtcctcgagc ccggcccgca ggcgctcgac
     3121 gggcgcgccg tcggcgtcgt ggcgggaacg gcgcacgagg cctatttcac cacgttcttc
     3181 ccgcgcgccg cggcgaagac cttcgccacg ctcggcgccg ccaccgccgc cctgcgccgc
     3241 ggcgaggtgg agtatgtctt cggcgacggc ctgggcctcg cattatgggt cggcggcacc
     3301 gacgccgcag gatgctgcaa cctgaccggc ggcccgtatc tcgagagccg cttcttcggc
     3361 gagggcatcg gcttcttgct ccgcaaggag gacgagaacc tccgccgcgc cctcgatttc
     3421 gccctgcagc gcctctggga ggaagggcgc tatgccgaac tctacctgcg ctttttccca
     3481 gtaagcccgt tttgatcgcc gcttgaacgg tccttgcgcc cgtcgatccg ggcctttagg
     3541 ggagggcagg gcgggggaca tggcgcaaag cgcctacccg aagccggtat ggccccggcc
     3601 tgtgacaccg acgcgccgtc ggccttccct ttgaagggga ggaatgaacc agacctcatc
     3661 ataaccttgt gacgccatga accgccccct cactgtcgac ccagcgctcg ctgaagccgc
     3721 ccgcacggcc accgcatggc cgttcgagga agcacgcaag ctggtcgagc ggctcaagcg
     3781 caccggcaag accgaggcgt tgttcgagac cggctacggg ccgtcgggcc tgccgcatat
     3841 cggcacgttc ggcgaggtgg cgcgcacgag catggtccgc catgccttcc gggtgctgac
     3901 cgaggaccgc attccgacgc ggctgttcgc cttctccgac gatctcgatg ggctgcgcaa
     3961 ggttcccgac aacatcccca acaaggagat ggttgcgcgc tatctcaaca agccgctgac
     4021 cgaagtgcca gatcctttcg gcacgcacga gagcttcggc caccacaaca atgcgcgcct
     4081 gcgcgccttt ctcgatgcct tcggcttcga ctacgaattc ctctcggcga cgcaatgcta
     4141 tcgctcaggg cgcttcgacg cgacgctcct gaaagtgctt gagcgctacg aggccgtgat
     4201 ggcgatcatg cttccctcgt tgcgggaaga gcgtcagcag acctattcgc cgtttcttcc
     4261 gatccacccg aagacgcgcg acgtcatgca ggtgccgatc gacgaggtga agcgtgatgc
     4321 aggcaccatc gtctggcgcg atccgcacag tggcgagcgc ttcgagacac cggtcaccgg
     4381 cggccatgcc aagctgcagt ggaagcccga ttgggcgatg cgctgggtgg cgctcggcgt
     4441 cgattacgag atggccggca aggatctgat cgactcggtc aagctgtcgg gtgagatcgc
     4501 ccgggtgctc gacggcttgc cgcccgaggg ttttaattac gagctattcc tcgacgacaa
     4561 gggccagaag atctcgaagt cgaagggcaa tgggctcacc atcgacgagt ggctcgccta
     4621 cggcacgccc gagagcctgg ccctgttcat gtacaacaag ccgcgcgagg cgaagcggct
     4681 ttacttcgac gtgatcccgc ggcatgtcga cgactacctg accttcctcg aaaaattccc
     4741 gcagcaggac gcaaaggcgc agctcgcgag cccggtctgg cacatccatg ccggcgcgcc
     4801 gccggcgccg gagctcgtgt ccccgagcgc ggcgcggccc ggcacgacga tttcgtttgc
     4861 catgctgctc aacctggtcg ccgtggcgaa ttcggaggag ccggcggtgc tgtggggctt
     4921 catccgccgc tacgcgccgg aggtctcgcc ggagacgcat ccgcgtctcg accggctcgt
     4981 cggccacgcc gtgcgctatt tccgtgattt cgtgcgcccg gccaagacct accgtctgtc
     5041 gaacgaggcg gagcggcagg cgctggcgca gctggccgac gccttgcggc cgctcgaagg
     5101 ctcgaccgac gcggaggcct tgcaggccat cgtctacgag atcggccgcg cgcatttccc
     5161 cgacacgtcg ggcaagtcca aaagcccgga tggacggcct ggcgtgtcac agacgtggtt
     5221 cgcaacgctc taccagatcc tgctcggaca ggagcgcggg ccgcgtttcg gctctttcgt
     5281 ggcgctctat ggcgtggccg agacctgcgc cctcatcgcc aaggcgctgt caggcgatct
     5341 cgtgcgcgag catgaagctt ttctgctagc gcgtggtgcg aaccagcagc tcgagcccgc
     5401 gtaagctact gccgcgccca catcacgcgg gccatccagg cgatctcgtt cgtcgggatg
     5461 acgcggtccg ggtgctcggt gttgagcgag cggagttcga tgctcttggc ggtgcggcgc
     5521 ttcagttcct tggcggtcac ctcgccgcct ttggtcctca ccacgatacg gtcgcctttg
     5581 cgcacgttcg ccgtcggcga cacgatcagc acgtcgccgt cgcggtaaag gggctgcatg
     5641 gagtcgcctt gcacctcgag cgcgaacacc ttttcgttgg acaggtcggg gaattcgacc
     5701 tcttcccaac ccgcgccccc ggccggcatg ccttcgtcgg tgaagaagcg accagcccct
     5761 gcctgggtga gcccgatcag cgggatcatg gtgcgggcct ggccgacgcc gggatcgacc
     5821 agccgcatga actcgtcgag gcttgcgccg gtcgcgttga ggatcttgga aaccgactcc
     5881 gttgacggcc atcggtcgcg cccgtcgggg ctcgtgcgtt ttgagcggtt gaagctcgtc
     5941 gcgtcgaggc cggccttgcg ggcaaggccc gatgccgaga ggccgtagcg ttcggcgagc
     6001 cgatcgatgg cggtccagat gcgcgcgtga ttgagcatgg gtcaccccgg tcgcgagggt
     6061 tgaagcgtga tccggcgagg tggttaccgg cctcgctgga caaggcctgt cccggttggt
     6121 ccgggctcgt tggccacaag ggagagagca ggatcggtcc gccgcgcgac ccggcgccaa
     6181 gcgcttgtgg gaagtcgagc ctgccagtag gaaattaagc tggcaagccc ggaggtcgcc
     6241 gtcagctgcg ctttttttct gtgcgtgcct tgcttgccgc cggcgggtgg cgcacctcac
     6301 ggcgcacttg gatggttcgg ctatgacgct ggtttacaag atctgtcccg agccgatgtg
     6361 gcgggaagct gaacgcgccg gcgtgttttc aggcgcgcca gtggatgtgc gggacggctt
     6421 tatccatttc tccacggccg cccaggtcgc ggagaccgcg gcgaaacatt tcgcgggcct
     6481 gaccgacctg ctgctggtcg cggttgacgc cgaggccctt ggcaagggct tgcgctatga
     6541 gccgtcgcgg ggcggcgatc tctttcccca tctctatggt ccgctgctcc tggctgccgt
     6601 gcgctgggtg aagccgctgc cgctcggcgc cggcggacgg catgtcctgc ccgtgctgtg
     6661 acgtccgcag ctcagaaacc cacgttagcg gcgcgacctg aacagcctcg ataccagcca
     6721 gatcggcacg acgatgacgg cgccgtaaag aacccaacgg ccgaggtcgc ggagtgtctc
     6781 gaagccaagg ccgaatacgg agcgcacgag gtagacgacg tggtcgaaca gcccaagcgg
     6841 cgtcacgtcg agaaaggcca gaagcgcgcc caccagcaac gacaggaaga tcagcttgat
     6901 gagcacggac caaagcggtc cgccgagaaa atcctgcacc ttgaccctcc gcgccctggc
     6961 gttccgggat gcctaatcca aaagcggcca attcgtccaa tctggcggca gcgcggcttt
     7021 ccccccttgt cttcaaggcg ttgcgacgga acaatccccg tctagcgccg cgcgccatgt
     7081 acgtgcgccg catgggagga acaatatgca atcgcgcctc tacgctcttg ccgttctctg
     7141 cctgacattg gctctgcccg gcgccgcggc cgtggcccag gattacccga accggccgat
     7201 ccgctggatc gtgccttacc cgcccgccgg cacgacagac gtcctggcgc ggatcatggg
     7261 cgactacctg tcgcgcaaga tgggtcagca attcatcatc gacaaccggc cgggagcggg
     7321 caacaacatc ggcacggagg cggtcgtgag cgcgccgccg gacggttaca cggtgctcct
     7381 cgtcaacccg gccaacggca tcaacgccac tctctacaag aagctgccct tcaacttcat
     7441 ccgcgacatt gccccgatcg gcggcttgat ccgcgtcccg aacgtgatgg agatcaaccc
     7501 cgacgtgccg gccaagaccg tcgccgagtt catcgcctac gccaaggcga atcccggcaa
     7561 gatcaacatg gcctcgtccg ggctcggcac ctcggtccat ctttcgggcg agctgttcaa
     7621 ggcgatgacg ggggtgcaga tggtgcatgt gccctatcgc ggcgccggcc cggccctgac
     7681 cgacctcatg accgggcagg tgcacgtcct gttcgacaac ctgccatcgt ccgtcgagca
     7741 catcagggcc ggcaagctgc gcgccctggc cgtaaccacg gacaagccga cgccggcctt
     7801 gcccggggtg ccgacggtcg ccgagacggt acccggctac gaggcgagcg cctggttcgg
     7861 catgggggcg ccgaaggaca cgccgcgccc gatcatcgag cggctcaacc gcgagatcaa
     7921 cgcggccctc cgcgatccgg agatgcagaa gaagctcgcc gatctcggcg gcaccatcat
     7981 gcccggaacg ccggaagatt tcggcaaggt catcgccgaa gagacggaga agtggcgcaa
     8041 ggtcgtcgaa ttctccggcg ccaagctcga ataaggccgg ctgccgatcc cggggctact
     8101 cgagaacggt cgtcggcggc ttgatgaccg cgccgatctt tgatgcggcg atcacggcct
     8161 gggtccggct gtcgacgcgc agcttctgca ggatcgcgga gacatgcgcc ttcacggtcg
     8221 cttccgagac gccgagctcg taggcgatct gcttgttgag caagccttcc gacagcatca
     8281 tcagcacgcg cacctgctgc ggcgtcagca aggcaaggcc gcgcaggagc tccgcgatct
     8341 cctgatcgtc gggcgcgctc aggtcgacgt cgggcggggt ccaggtcccg cccgacagga
     8401 tcgtggtcaa ggccgacccg atctgatcga tggtgaggga cttggggacg aagcctgacg
     8461 cgccgaactc gagcgcgcgc cggatcaccg caacgtcctc atgcgccgag acgatcacga
     8521 ccggcacttg tggaaactgc gcacgcaggt ag
//
LOCUS       DATAIQ010000067         2059 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_372452, whole genome shotgun sequence.
ACCESSION   DATAIQ010000067 DATAIQ010000000
VERSION     DATAIQ010000067.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2059)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2059)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2059
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_372452"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            237..437
                     /locus_tag="VHN20_01110"
     CDS             237..437
                     /locus_tag="VHN20_01110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020177357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit 2A"
                     /protein_id="HEX2724396.1"
                     /translation="MPSSDLPWADPASLDATDDIDDAALARVMEEVPRGALALSGLTV
                     ALLMLAWFLVYAWVFLPRGMVG"
     gene            441..983
                     /locus_tag="VHN20_01115"
     CDS             441..983
                     /locus_tag="VHN20_01115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020177358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome C oxidase subunit II"
                     /protein_id="HEX2724397.1"
                     /translation="MPANEEAILRSELGWAAVSMGTVSVIMLAIIYAGVVHHINPPSN
                     IETIDPKTLHLTGEFTEENLGTRIESNGQVTSRIVATQFAFQPQCIVVPANRPVTLRL
                     ASPDVIHGILVTGTNVNTMVVPGFVSQVHTVFTKTGDLLMPCHEYCGLGHSQMWATVR
                     VVPEGEFKAGPDGRAGCDAR"
     gene            970..>2059
                     /locus_tag="VHN20_01120"
     CDS             970..>2059
                     /locus_tag="VHN20_01120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020177359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /protein_id="HEX2724398.1"
                     /translation="MTHARGLTLAHLWVAFIAFAVAALLGVWQMWARSPLPAPFLTAH
                     AYFTSVTAHGVSMAYVLTTFFVMGFGYYVAETALARPLPLPKLAWLGFVLGLVGAGMA
                     AFTVLKGTATVLFTFYPPLTASPYFYIGLVLVVAGSWIWCGLMILAMMSFKRANPGLP
                     VPLAMFATVANAVMWLWTTVGVAAELLFQVIPAAFGWKLGIDVGLSRTLFSWTLHAIV
                     YFWLIPAYIAFYTMAPQAAGGRLYSDTMGRLTFILFLIYSLPVGIHHLLMDPQQSNAF
                     KFLQMSFTALVAAPTLLTVFTISASMEIAGRLRGGRGLFGWIAALPWDRPMVLATGLA
                     FFMLWFGGGGGLINMSYGMNAMIHNTSWV"
BASE COUNT          294 a          718 c          660 g          387 t
ORIGIN      
        1 ggaccggccc aaatgccatc ccccgacagc ctttccccga tccgaccatc cccagcgtta
       61 ggcgcgcgcc cgcgtgccgg ctttgatctg cctcaagccg ggccgtcgcg cttagatcaa
      121 agcgcaccgc gaggaacaaa cagcgccgcc aagcgttgcc attgccgagc cgtgcaaccc
      181 cggtgatccc ccgcgccgga gcttggcctg aacggcggca tagacgcggg ggtcgcatgc
      241 catcttcaga tttgccgtgg gcagatccgg ccagcctcga tgcgaccgac gacatcgatg
      301 acgcggcgct cgcgcgcgtc atggaggagg tgccgcgcgg cgcgctggcg ctctccgggc
      361 tgaccgtggc gctgctcatg ctcgcctggt tcctggttta tgcctgggtg ttcctgccgc
      421 gcggcatggt gggttgagcg atgcccgcca atgaggaagc gatccttcgc tcggagctcg
      481 gctgggccgc ggtgtcgatg ggcaccgtct cggtgatcat gctcgcgatc atctacgcgg
      541 gcgtcgtcca ccacatcaat ccgccgagca acatcgagac gatcgatccc aagaccctgc
      601 acctgacggg cgagttcacg gaggaaaatc tcggcacgcg catcgagtcc aacgggcagg
      661 tcacgagccg catcgtcgcg acgcaattcg ccttccagcc gcaatgcatc gtcgtgccgg
      721 caaaccgccc ggtcaccctg cgcctcgcct cgccggacgt gatccacggc atcctggtga
      781 ccgggaccaa cgtcaacacc atggtcgtgc cgggcttcgt cagccaggtc cacacggtgt
      841 tcacgaagac cggggacctg ttgatgccgt gccatgaata ttgcggcctc gggcacagcc
      901 agatgtgggc gaccgtgcgc gtcgttcccg aaggcgagtt caaggccggg ccggacggga
      961 gggcgggttg tgacgcacgc tagaggtctc acgctcgccc atctgtgggt cgccttcatc
     1021 gccttcgcgg tcgcggcgct gctcggcgtg tggcagatgt gggcgcggag ccccttgccg
     1081 gcgccgttcc tgaccgcgca tgcctatttc acgtcggtga ccgcgcacgg cgtttccatg
     1141 gcctatgtgc tcaccacgtt cttcgtgatg gggttcggct attacgtcgc cgagaccgcg
     1201 cttgcgcggc cgttgccgct gccgaaactt gcctggctcg gcttcgtgct cggcctcgtc
     1261 ggcgccggca tggccgcctt caccgtgctg aagggcaccg ccaccgtcct gttcaccttc
     1321 tacccgccgc tcaccgccag cccctatttc tacatcggcc tcgtcctggt ggtggccggc
     1381 tcgtggatct ggtgcgggct gatgatcctg gcgatgatga gcttcaagcg cgccaatccc
     1441 ggcctgccgg tgccgctcgc catgttcgcg accgtcgcca acgcggtgat gtggctgtgg
     1501 accaccgtcg gcgtggcggc cgagctgctg ttccaggtga tcccggcggc gttcggctgg
     1561 aaactcggca tcgacgtcgg cctctcgcgc acgctgttct cgtggacgct gcacgcaatc
     1621 gtctatttct ggctgatccc ggcctacatc gccttctaca cgatggcgcc gcaggcggcc
     1681 ggcgggcgcc tctacagcga cacgatgggg cggctcacct tcatcctgtt cctgatctac
     1741 agcctgccgg tcggcatcca ccacctcctg atggacccgc agcagtcgaa cgccttcaag
     1801 ttcctgcaga tgagcttcac ggcgctcgtc gccgcgccga cgctgctcac cgtcttcacg
     1861 atctcggcct cgatggagat cgccgggcgc ctgcgcggcg ggcgcggcct gttcggctgg
     1921 atcgcggcgc tgccctggga caggccgatg gtgctcgcca cgggcctcgc cttcttcatg
     1981 ctgtggttcg gcggcggcgg cgggctcatc aacatgagct acggcatgaa cgccatgatc
     2041 cacaacacgt cgtgggtga
//
LOCUS       DATAIQ010000068         2733 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_3732, whole genome shotgun sequence.
ACCESSION   DATAIQ010000068 DATAIQ010000000
VERSION     DATAIQ010000068.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2733)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2733)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2733
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3732"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            165..1001
                     /locus_tag="VHN20_01125"
     CDS             165..1001
                     /locus_tag="VHN20_01125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010682526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX2724399.1"
                     /translation="MHHDRRLGLSGYGICLAGIVARELLRFVHQKERFFSALVRPLVW
                     LFIFAAGFRSVLGVSIIPPYETYILYEVYITPGLAVMIQLFNGMLSSLTMVYDRELGS
                     MRVLLTSPFPRWFLLLAKLVGTVAVSLIQVYVFLAIARFWDVDIPAWGYLLALPALIV
                     TGFMLAAIGLLLSSLVRQMDNFASVMNFVIFPMFFASSALYPLWRIREASEALYVICL
                     INPFTHAVELVRHALYGSFEPVSALVVTGTTLAFFLLAVLAYDPGRGMMSRRGGPAGD
                     AQ"
     gene            998..1603
                     /locus_tag="VHN20_01130"
     CDS             998..1603
                     /locus_tag="VHN20_01130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007563862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724400.1"
                     /translation="MTRLAALLVAALLGSAGAGKAQPTAQDWPCVQRKVPTIAAGAIW
                     AGPDPAAAADWGRDAAAAALAQKLAARRTALDEADQLIDAFAAAAGSEREQRLTRVFA
                     GVLELINLERSRVIEAIERYARGQRRLADRVRDESDRLSAVKDSPGAQGPADDRALET
                     EFFWDKRIFEERSQALPYVCEAPVILEQRLFELARKLQQRL"
     gene            complement(1775..>2733)
                     /locus_tag="VHN20_01135"
     CDS             complement(1775..>2733)
                     /locus_tag="VHN20_01135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018041895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HEX2724401.1"
                     /translation="FPAILGHEGAGVVVDIGPGVTSVTKGDHVIPLYTPECRQCKTCL
                     SRRSNLCTSIRATQGKGLMPDGTSRFKAVNGGNNPVFHYMGCSTFSNFTVLPEVAVAK
                     VREDAPFDKICYIGCGVTTGIGAVIYTAKVWPGANVAIFGLGGIGLNVIQGARMVGAD
                     KIIGIDLNPGKRAMAEKFGMTHFINPDEVGRDKVVQAIVDLTGGGADFSFECIGNVHT
                     MRQALECCHRGWGESIIIGVAASGQEIATRPFQLVTGRVWRGTAFGGARGRTDVPKIV
                     DWYMEGKINIDDLITHKLPLERINEGFDLMHEGKSIRTVVEY"
BASE COUNT          377 a          961 c          906 g          489 t
ORIGIN      
        1 gcatcgcggg cgcgtcgtcg cccgcggcga cacggccgac atcattgccg ccgcgcccgg
       61 cgcgcattcg ctcgaggata cgttccgcgc cctcaccgtc gaccccggca aggaagcacc
      121 cgatgcatga ggcggacacc cagccctcgc cctggccggg tgccatgcac cacgaccgtc
      181 gtctcggcct gtcgggctac ggcatctgcc tcgccggcat cgttgcgcgc gagctcctgc
      241 gcttcgtgca ccagaaggag cgcttcttct cggcgctcgt gcgcccgctc gtgtggctgt
      301 tcatcttcgc cgccggcttc cgcagcgtgc tcggcgtctc gatcatcccg ccttacgaga
      361 cctacatcct ctacgaggtc tacatcacgc cgggccttgc cgtgatgatc cagctcttca
      421 acggcatgct gtcgtcgttg acgatggtct acgaccgcga gctcggctcg atgcgcgtgc
      481 tcctgacgag cccgttcccg cgctggttcc tgctgctcgc caagctggtc ggcacggtcg
      541 ccgtgtcgct gatccaggtc tacgtcttcc tcgccatcgc ccggttctgg gacgtcgaca
      601 tccccgcctg gggttatctc ctggcgctgc ccgccctgat cgtcaccggc ttcatgctgg
      661 cggcaatcgg ccttcttttg tcgtcgcttg tgcggcagat ggacaacttc gccagcgtca
      721 tgaacttcgt gatctttccg atgttcttcg cctcgtccgc gctctatccg ctgtggcgca
      781 tccgcgaggc gagcgaggcg ctttacgtga tctgcctgat caatcccttc acgcacgcgg
      841 tcgagctcgt gcggcacgcg ctttacggct cgttcgagcc ggtgtcggcg ctggtcgtga
      901 ccggcacgac attggcattt ttcctgctcg cggttctggc ctacgatccc gggcgcggca
      961 tgatgagccg gcggggcggc ccggcgggag acgcgcaatg acgaggctgg cggcattgct
     1021 cgtcgcggcg ctcctcggct cggcgggcgc cggcaaggcg cagccgacgg cgcaggactg
     1081 gccgtgcgtg cagcgcaagg tgccgacgat cgccgccggc gccatctggg ccgggcccga
     1141 tcccgccgcc gccgcggact ggggccgcga tgccgccgcc gccgcgctcg cccaaaagct
     1201 ggcggcgcgc cggaccgccc tcgacgaagc cgatcagctg atcgacgcct tcgccgccgc
     1261 cgccggatcg gagcgcgagc agcgcctgac gcgcgtcttc gccggcgtgc tcgagctgat
     1321 caacctggag cgcagccgcg tcatcgaggc gatcgagcgt tacgcgcgcg gccagcgccg
     1381 cctcgccgac cgcgtgcgtg acgagagcga ccgtctcagc gccgtcaagg attcgccggg
     1441 cgcgcagggc cccgccgacg atcgcgccct cgagacggag ttcttctggg acaagcgcat
     1501 cttcgaggag cgcagccagg cgctgcctta cgtctgcgag gcgccggtca tcctcgagca
     1561 gcgcctgttc gagctcgccc gcaagctcca gcagcggctg tagcattccc ctcccccttg
     1621 cggggagggg gtaggggtgg gggtcgaacg acgcgggcca ttcgaaattc gagcgcgaat
     1681 ctgaacccgc tcaccaagcg gcgccatccc cctctccggt cgtgcgctgc gcgcccgact
     1741 cggccctccc ccgcaagggg ggagggattc gcgctcaata ctccacgacg gtgcggatag
     1801 acttgccttc gtgcatcagg tcgaagcctt cgttgatgcg ctcgagcggc agcttgtgcg
     1861 tgatcaggtc gtcgatgttg atcttccctt ccatgtacca gtcgacgatc ttgggcacgt
     1921 cggtgcgccc gcgcgcgccg ccgaaggcgg tgccgcgcca tacgcgccct gtgacgagct
     1981 ggaacgggcg ggtcgcgatc tcctggcccg acgcggcgac gccgatgatg atgctctcgc
     2041 cccagccgcg gtggcagcat tcgagggcct ggcgcatcgt atgcacgttg ccgatgcact
     2101 cgaacgagaa gtcggcaccg ccgcccgtca gatcgacgat cgcctgcacg accttgtcac
     2161 ggccgacctc gtcggggttg atgaaatgcg tcatgccgaa tttttcggcc atggcgcgct
     2221 tgccgggatt gagatcgatg ccgatgatct tgtcggcgcc gaccatgcgc gcgccctgga
     2281 tgacgttgag gccgatgccg ccgagcccga agatggcgac gttggcgccg ggccacacct
     2341 tggcggtgta gatcaccgcg ccgatgccgg tggtgacgcc gcagccgatg tagcagatct
     2401 tgtcgaaggg cgcgtcctcg cgcaccttgg cgacggcgac ctcgggcagc acggtgaagt
     2461 tcgagaaggt cgagcagccc atgtagtgga acacggggtt gttgccgccg ttcacggcct
     2521 tgaagcggct cgtcccgtcc ggcatcaggc cctttccctg cgtcgcgcgg atcgacgtgc
     2581 acaggttgga gcgccgcgaa aggcaggttt tgcactgccg gcattcgggc gtgtagagcg
     2641 ggatgacgtg gtcgcccttc gtcacgctcg tcacgcccgg cccgatatcg accaccacgc
     2701 ccgcgccctc atggccgagg atggccggga aca
//
LOCUS       DATAIQ010000069        13589 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_372525, whole genome shotgun sequence.
ACCESSION   DATAIQ010000069 DATAIQ010000000
VERSION     DATAIQ010000069.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 13589)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13589)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13589
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_372525"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..320)
                     /locus_tag="VHN20_01140"
     CDS             complement(<1..320)
                     /locus_tag="VHN20_01140"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030551 - cyclic nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HEX2724402.1"
                     /translation="MARLDRSVISGLPIFAGLAPEQLDDVLAEVQSIRFAKRASVFEQ
                     GQEELAFFALLHGRLRVAKLTPDGHQVLVRFVLSGEIFGVAGAIGRAIYPASASAVVH
                     SVVLV"
     gene            518..1708
                     /locus_tag="VHN20_01145"
     CDS             518..1708
                     /locus_tag="VHN20_01145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012319533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NnrS family protein"
                     /protein_id="HEX2724403.1"
                     /translation="MTAIPRLRDYQGPTLLSYGFRPFFLFGALYAGLSVLAWLPMFFG
                     HLELATAFTPRDWHVHEMLYGYVAAVVTGFLLTAIPNWTGRLPLQGRPLLALLLVWGA
                     GRIAVTLSAVIGPVIAMAVDLSFLLLVGAAAAREILAGRNWRNLKVLLVLAVLSAGNA
                     TFHLESLHAGVATYGIRIGFAAVVLLIMLVGGRIVPSFTRNWLVRANPGPLPAPFGRF
                     DIVAMVIAALAVTFWVVAPDAPLTGAALVAAAILHATRLARWAGHRTARDPLVMILHV
                     GYLFVPVGFALLAAAAYGTVPPSAGLHAWAAGAVGVMTLAVMTRASLGHSGRALTASP
                     ATQAIYALAVTSALARLCAALEPQWSTVLLHVAAAAWAAAFLGFAVAYWHVLAGRRPA
                     TQAA"
     gene            2184..2612
                     /locus_tag="VHN20_01150"
     CDS             2184..2612
                     /locus_tag="VHN20_01150"
                     /inference="COORDINATES: protein motif:HMM:NF040427.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6455 family protein"
                     /protein_id="HEX2724404.1"
                     /translation="MGDSAAFDWLARPLGRIQQWWSAAAKWEALVRELENAGEDGARI
                     LQELRLNGGDLHHLMVASTDNALLLSRMMAALGLDAEEVARELPAIMRDLERACAACG
                     SKSRCRHDLDSGDAPARSADYCPNKPTLSALQAVTLSRAE"
     gene            2688..3005
                     /locus_tag="VHN20_01155"
     CDS             2688..3005
                     /locus_tag="VHN20_01155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020177293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEX2724405.1"
                     /translation="MDQRLAVMLAVCLVSCPAAAQDARAQRGRVFAQTNCATCHAIGR
                     VGESPLRIAPPFRTLHTRYPVEHLAEAFAEGIVTGHPSMPEFQLDVAQIRDLVAYLKT
                     LEH"
     gene            3216..4877
                     /gene="ccoN"
                     /locus_tag="VHN20_01160"
     CDS             3216..4877
                     /gene="ccoN"
                     /locus_tag="VHN20_01160"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015928783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit I"
                     /protein_id="HEX2724406.1"
                     /translation="MPAMIRTKYMTEGEAGLCAAFFVSFLFCLVAAARALDPGFGFHA
                     FLGGAASLGAIALILHRYTKRDAVLPPHEIAGKPNYNFGPVKFAAVAGMVWGIVGFLV
                     GVIIAFQLWAPALNLDLPYTSFGRMRPLHTSAVIFAFGGNVLIATSLYVVQRTCRARL
                     AGDLAPWFVVLGYNFFIVIAGTGYLLGITQSKEYAEPEWYADLWLTIVWVAYLLVFLA
                     TIWKRKEPHIFVANWFYLAFIVTIAMLHIVNNLAMPVSVFGSKSYPIFAGAQDALVQW
                     WYGHNAVGFFLTSGFLAIMYYFVPKRAERPVYSYRLSIIHFWALTFTYIWAGPHHLHY
                     TALPDWAQTLGMVFSIILWMPSWGGMLNGLMTLSGAWDKLRTDPVLRLMVVSLAFYGM
                     ATFEGPMMSIKAVNSLSHYTDWTIGHVHSGALGWVAYISFGALYCLVPWLWKRDLYSL
                     KLVDWHFWVSTLGIVLYITSMWVAGIMQGLMWRAYNALGFLEYSFLETVEAMQPFYLI
                     RAVGGVLFLVGALIMAFNLYMTIRGYAVREAERVPALVPALVPAE"
     gene            4885..5631
                     /gene="ccoO"
                     /locus_tag="VHN20_01165"
     CDS             4885..5631
                     /gene="ccoO"
                     /locus_tag="VHN20_01165"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015928784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit II"
                     /protein_id="HEX2724407.1"
                     /translation="MASAQPGLWNRHAFLEKNSILLVIAILMVAAVGGLIEIVPLFYL
                     KSTVEKVEGMRPYTPLELAGRNIYVREGCYLCHSQMIRSMRDEVERYGHFSLAAESMY
                     DHPFQWGSKRTGPDLARVGGKYSDEWHRDHLRDPRAVVPTSIMPTYAFLDRPLDVESV
                     AGDLKANRAIGVPYSDEMIAKARSDVLAQANPDDAGADEFQKRYPNAAVRDFDGDAKR
                     VTEMDALVAYLQMLGTLVDFKLYDHKANSR"
     gene            5628..5780
                     /locus_tag="VHN20_01170"
     CDS             5628..5780
                     /locus_tag="VHN20_01170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012592614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit 3"
                     /protein_id="HEX2724408.1"
                     /translation="MSTYNFLAQFAQTGGLLYFVLIFAAVVVYALRPRNRARFDAAAR
                     IPLSKD"
     gene            5785..6663
                     /gene="ccoP"
                     /locus_tag="VHN20_01175"
     CDS             5785..6663
                     /gene="ccoP"
                     /locus_tag="VHN20_01175"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011085551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit III"
                     /protein_id="HEX2724409.1"
                     /translation="MTEAAKPTVDAVSGTETTGHEWDDIRELNNPLPRWWLYGLYATI
                     VWAIGYCIAYPAWPLVNDYTRGLLGHSQRQAVMEEVATAKAARGALGEAIAKASLDEI
                     RSSPDLLELALANGKAAFGDNCASCHGTGAAGRTGYPNLQDDEWLWGGTLAAIHQTIR
                     FGARSGHGEAHAGEMLAFGRDGMLKRVEIEAVANYVLSLSRKAYDGKLSLEQGKAIFE
                     QNCVACHGDQAKGNQEMGAPDLTDAIWLYGASPQQVVASVTNGRKGVMPAWEGRLDPV
                     TIKSLTIYVHSLGGGK"
     gene            6941..8392
                     /gene="ccoG"
                     /locus_tag="VHN20_01180"
     CDS             6941..8392
                     /gene="ccoG"
                     /locus_tag="VHN20_01180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018964119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008535 - respiratory chain complex IV
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase accessory protein CcoG"
                     /protein_id="HEX2724410.1"
                     /translation="MNQTEAVAPAVRTYTLYEARKKIHPLGVKGRFRRIKWAVLVVTL
                     AIYYVLPFLRWDRGPHAPDQAILVDLAGGRFYFFFIELWPQEVYYITGLLILAALLLF
                     LMNAVAGRVWCGYLCPQTVWTDLFIAVERLVEGERRERIRLDAAPWTAAKVGRKVVKH
                     AIWLMIAWWTGGAWVLYFADAPTLVRHLAAFQAPLAAYVSIAILTLTTYTLAGFMREQ
                     VCTYMCPWPRIQGALTDEHSLNITYRYDRGEPRGSAKKNDWLRAQGQPAGDCVDCGQC
                     VAACPAGIDIRNGLQMECIQCGLCADACDTVMTKVGRPTGLIAYDTDENIRRRLRGEA
                     PVIKIVRARTILYTAVIAITGAVMLYALATRSFTEISVLHDRNPVYVTLADGAIRNGY
                     TVRILNKRPFERHFTVEVENVPGARVEVVGVDESASGHPVVTIGPDTTREVRALVFAP
                     AGARLARSTPITLHLRDTAGGEPAHAREYFKAP"
     gene            8389..8889
                     /locus_tag="VHN20_01185"
     CDS             8389..8889
                     /locus_tag="VHN20_01185"
                     /inference="COORDINATES: protein motif:HMM:NF017559.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FixH family protein"
                     /protein_id="HEX2724411.1"
                     /translation="MTQAVSLSSRRLTGWHVLAILLTFFGTIAMADAVLIYSAVRSWT
                     GAETTSAYRAGQLYNGERAQAQTQAALGWQVDARAERRPDDTVQVSVAARDQGGRPLT
                     GVTWGAVLQRPTSQRDDRVVALRQGAYAQVAIISDLAPGQWDLVVEGSRGGERAYRSK
                     TRLVLR"
     gene            8934..11123
                     /locus_tag="VHN20_01190"
     CDS             8934..11123
                     /locus_tag="VHN20_01190"
                     /EC_number="7.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007594009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015662 - P-type ion transporter activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0019829 - ATPase-coupled monoatomic cation
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HEX2724412.1"
                     /translation="MNAFARDFSPFVSLTAEGASRVELAVEGVRCAGCMNVIEKGLGA
                     LPGVVKARLNFTDRRLAVEWRGGLDVTRLLAELDALGYRAHPFDPKRSDAAEAREAKQ
                     LLRAVAVAGFASMNIMLMAVSVWAGNVSDITPETRDFFHWMQALIALPAAAYAGRPFY
                     ESALGAVRAGRMNMDVPITLGVVLSLVMSVVETISHAEHAYFDGAVMLLFFLLVGRFL
                     DRNMRRRTRTFAENLSALRCETAARIGPDGAVRDAPLSAVRPGDRVLLRPGERVAVDG
                     VVEDGASEIDQSLVTGETALAAVAPGSRVYAGALNASGALTVRVTAASGTLLDEVNTL
                     LSRALEAKSNALRLADRATRLYAPLVHVAAAATALGWLAAGAGWHMAVLNAVAVLIIT
                     CPCALGLAIPAVQVVAAGALFRRGVLLNSGDALERLAEVDTVVFDKTGTLTLPEPSLI
                     DAGHDPKTLERAARLALSSRHPLAGALAAAARERQPWPGAQESAGRGVQASAGGVEMR
                     LGSAAFCEAGREADAALARHPDASVICFREGDAPPAVFLVRQALREDAADTVAGLARR
                     GYDVVIMSGDRAPAVAAAADALGVRDWAADLRPADKIARIEALERAGRKVLMVGDGVN
                     DAPALAAATVSLSPVTAAHVSQAAADAVFMGRRLAPVVGALQAGRQARRLMMENLWFS
                     ALYNVAAVPLAAFGYLTPLIAAIAMSTSSVVVTLNALRARLATREAP"
     gene            11120..11260
                     /gene="ccoS"
                     /locus_tag="VHN20_01195"
     CDS             11120..11260
                     /gene="ccoS"
                     /locus_tag="VHN20_01195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007596865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008535 - respiratory chain complex IV
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome oxidase assembly protein
                     CcoS"
                     /protein_id="HEX2724413.1"
                     /translation="MNVLVFMIPIALTLGLLGLGAFLWSLNTGQFDDIDGAEYRVIGD
                     DD"
     gene            11450..>13589
                     /locus_tag="VHN20_01200"
     CDS             11450..>13589
                     /locus_tag="VHN20_01200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009337920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004197 - cysteine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="caspase family protein"
                     /protein_id="HEX2724414.1"
                     /translation="MRTVACLFSLLALALLSPAAAQQPEKRVALVVGNAAYAAGTLAT
                     PANDAGLVAQTLQAAGFDVVGARDLDQEALRRAFRDFNDKAAASGPDTVAVIYLSGHG
                     LQLEGENYFVPVDARIARDADVPAEALRISDFSRPLAALPLKAGMIILDAARANPFAQ
                     GGAPLAGGLALVEPEARMLLAFNAAPNTVAPQGQGAYGPYAQALAEVMREGGLPLGDM
                     FDRVRLRVHETTKGAQVPWHVSRVEAPFVFFERTADAPPPLTDTSPAAAARARPLRDI
                     GVKEAYALALERDSVESYSEFVSAYGNDPLARRARAMLAARREALTWRRTRVVDTPDA
                     YWSYLRRYPRGPHAGDAQRRLRVLAAALEPPEAFAEIDYDLPPPPVEEVVYIERPVIV
                     LDDPVFAFAPPPPAPFYLLPPPPLEFVLLPPPPPPVAVYVLPTPVYTPVPVWVRPPAY
                     VRAPPPTNVIFRNVHNTVTINSATNTVTVRTPAGAVRRLAPPATAAAFRGPGLAGQGP
                     RSAPRAGAALLAPTLPPSLVQRAPTIRPASVQRSGPGNALGAASTLRGQPPTARLAPG
                     QPLPGTRGQPLPATAPTVTPDQRVRGAGVPAARGQVPVRASGAPSAHAAAAATPDLRQ
                     RQMHQQQLEARQYQLQQQQARQYQLQQQQARQYQSRQQPLQPQRAQTLSQQQVQQVQP
                     QRQYQTAPRRSPPEQRSGGRRPPCGQPGLPA"
BASE COUNT         2010 a         4848 c         4438 g         2293 t
ORIGIN      
        1 accagcacga cgctgtggac gaccgccgac gcgctggccg ggtagatcgc gcgcccgatc
       61 gccccggcga cgccgaaaat ctcgcccgac aggacgaagc gcacaagcac ctggtggccg
      121 tcgggagtga gcttggcaac gcgcaggcgg ccgtgcagga gcgcgaagaa tgcaagctcc
      181 tcctgccctt gctcgaagac gctcgcgcgc tttgcgaatc gaatggactg cacctcggca
      241 agcacgtcgt cgagctgctc gggcgcaagg ccggcgaaga tgggcagccc cgagatgacg
      301 gagcggtcca ggcgagccat cgagtatccc ttcctttggc cggcgaagca ggcaagcgca
      361 tcaataggcg gggaggcggc tccccgacaa ctgcggacat gcaacgcgcc ttcagcaggt
      421 tttctctctg ctggatttgc gctcgatcaa atcggccatg ccgctccggc gctattcatg
      481 gccggacagc tgacgagcga cgccgacgag gagcaaggtg acggcaattc cccgccttcg
      541 ggactaccag ggtcccaccc ttctctcata cgggttccgc cccttcttcc tgttcggcgc
      601 cctctatgcc gggctgtcgg tgctcgcctg gctgccgatg ttctttggcc atctcgagct
      661 ggcgacggcg ttcacgccgc gcgactggca cgtccatgaa atgctctatg gctatgtcgc
      721 ggctgtcgtc accgggtttc tgctcacagc cattccgaac tggaccgggc ggctgccgct
      781 gcaggggcgg ccattgctcg cgctgctcct ggtctggggc gccgggcgga tcgcggtgac
      841 gctctcggcc gtcatcgggc cggtgatcgc gatggccgtc gacttgagct tcctcctgct
      901 cgtcggcgcc gccgcggcgc gcgaaatcct ggccggacgc aactggcgta atctcaaggt
      961 cctgctcgtc ctggccgtcc tctccgcagg caacgccacc tttcacctcg aatccctgca
     1021 cgccggcgtt gccacttacg gcatccgcat cggattcgcc gcggtcgtcc tgctgattat
     1081 gctggtcggc gggcgtatcg tgccgagctt cacgcgcaac tggctcgtgc gcgcgaaccc
     1141 cggccccctg cctgctccgt tcggacgctt cgacatcgtc gcaatggtca ttgcggctct
     1201 ggccgtcacc ttctgggtcg ttgcacccga tgcacccttg acgggcgcgg cgttggtcgc
     1261 cgcagccatc ctgcacgcga cccgcctcgc gcgctgggcg gggcaccgga ccgcccgcga
     1321 tcccctcgtc atgatcctgc atgtcggcta tctcttcgtg ccggtgggtt ttgcgcttct
     1381 ggccgccgct gcttacggga ccgttccgcc gagcgctggt cttcatgcct gggcggccgg
     1441 cgccgtcggt gtcatgacgc tcgccgtcat gacacgcgcc agcctcggcc acagtggccg
     1501 tgcgttgaca gccagccccg ccacgcaggc catctacgct ctggcggtca cgtccgcctt
     1561 ggcccggcta tgtgctgccc tggagccgca atggagcacg gtgctgctgc atgttgccgc
     1621 ggcggcctgg gcggccgcat tccttggttt cgccgtcgcc tattggcacg tcctcgccgg
     1681 gcgccggccg gcaacgcaag ccgcttgacc cccctcgcgc cggacgtgcc gccgtcgttc
     1741 gggtttgttc cgcgtcaacg accacaccgc acgtgatggc acgataagag cggtgcaggc
     1801 gtcgcacgga gctccacatg acgcatcgtc attcgcgaca ggtagatttc acgcccgcgc
     1861 tgatggacgc gatgctggac cggctcggtt gtgacgaggc gactgccgtg cgtcggggcg
     1921 ccgccttcgc gactgctgcc cgccgctgtc tcggctgcgc tgcggcccag ctctgcggca
     1981 actggctcga gatcgccgcg caaccacgtg cggcgcccgc cttttgcccg aaccaggcct
     2041 tcttcgcttc gctgattcga tcaaagcggg ggccgtcgcg ctctggttct tgaagcagga
     2101 ccgtgcggcc atgccgcttg atctcgcgca aagcgcacgc gtcgaacgat ggctagcttg
     2161 gcaacaaccg ctgggaggat gacatgggcg attccgccgc attcgattgg ctggcaagac
     2221 ccttgggcag aattcaacaa tggtggtccg cggccgccaa atgggaggcg ctcgtgcgcg
     2281 agctcgagaa cgccggcgag gatggagccc gcattcttca ggagctgcgc ctgaatggcg
     2341 gcgacctcca ccacctgatg gtggcgagca cggacaatgc actcctgctg agccgcatga
     2401 tggccgccct cggcctcgac gccgaggagg tcgcgcgcga attgccggcg atcatgcgcg
     2461 acctcgagcg tgcgtgcgca gcgtgcggca gcaagagccg ctgccgccac gatctcgaca
     2521 gcggcgacgc gcctgcgagg tcggcagatt actgccccaa caagccgacg ctcagcgcgc
     2581 tgcaggccgt cacgttgagc cgggccgagt agcgcacgct atcgcgtttc ctttccggct
     2641 gtgcgcctgc aaccgagcgg cgcagcgata tccagatgga gcacgagatg gatcagcgcc
     2701 tcgccgtcat gctcgcggtt tgcctcgtca gctgtccggc cgccgcgcag gacgcgcgcg
     2761 cacaacgtgg ccgcgtgttc gcgcagacca actgcgctac ctgtcatgcg atcggccgcg
     2821 tcggcgagag tccgctgcgc attgcaccac cgttcaggac gctgcacacg cgctaccctg
     2881 tcgagcactt ggccgaggcc tttgcggagg gcatcgtgac cggccacccg agcatgccgg
     2941 agtttcagct cgacgtcgcc cagatcagag atctcgtggc ctatctgaag acgttggaac
     3001 actgagctgc caccgtcatg caaacggcac ggccgttaac accacgttga gcatgcccct
     3061 cacgcatgac ggcctcaagc gaaaatcaag gccgcagccg cagcctcttt gacctgcatc
     3121 aacgtcgccc gggcctgctg gcgccataga ggggcgacgt tgcgtcccat tcctttcctc
     3181 cttgtttttc ctcgagcgac gcgcgtgagc gaccgatgcc tgccatgatc cgcacgaaat
     3241 acatgaccga aggcgaggcc gggctttgcg ccgccttctt cgtcagcttt ctgttttgcc
     3301 tcgtcgccgc cgcgcgcgcc ctcgatccgg gattcggctt tcacgccttc ctcgggggtg
     3361 cggccagcct tggcgccatc gcgttgatcc tgcaccgcta cacgaagcgc gacgccgtgc
     3421 tgccgccaca cgagatcgcc ggcaagccga actacaattt cgggcccgtc aagttcgcgg
     3481 ccgtcgccgg catggtctgg ggcatcgtcg ggttcttggt cggggtgatc atcgccttcc
     3541 agctgtgggc gccggcgctc aacctcgatc tcccctacac gagcttcggg cggatgcggc
     3601 cgctgcacac gtcggccgtg atcttcgcgt tcggcggcaa cgtgctgatc gccacctcgc
     3661 tctacgtcgt gcagcggacg tgccgcgcgc gcctcgccgg cgatctcgcg ccgtggttcg
     3721 tggtgctggg ctataatttc ttcatcgtca tcgccggcac cgggtatctg ctcggcatca
     3781 cgcaatccaa ggaatatgcc gagcccgaat ggtacgcgga tctgtggctg accatcgtct
     3841 gggtcgcata tctgctcgtg ttcctggcca cgatctggaa gcgcaaggag ccgcacatct
     3901 tcgtggcgaa ctggttctat ctcgccttca tcgtcacgat cgccatgctg cacatcgtca
     3961 acaacctggc gatgcccgtg tcggtgttcg ggtcgaaatc ctacccgatc ttcgccggcg
     4021 cgcaggatgc tctcgtgcag tggtggtacg ggcacaacgc cgtcgggttc ttcctgacct
     4081 cgggcttcct ggcgatcatg tattacttcg tgcccaagcg cgccgagcgg ccggtctatt
     4141 cctaccggct ctcgatcatc catttctggg cgctgacctt cacctatatc tgggccggtc
     4201 cgcatcacct gcactacacg gcgctgcccg actgggcgca gacgctcggc atggtgttct
     4261 cgatcatcct gtggatgccg tcatggggcg gcatgctcaa cggcctgatg accctgtcgg
     4321 gcgcctggga caagctgcgc accgaccccg ttctgcgtct gatggtcgtg tcgctcgcct
     4381 tctacggcat ggccaccttc gaaggcccga tgatgtccat caaggcggtc aattcgctct
     4441 ctcattatac cgactggacc atcggccacg tgcattccgg cgcgctcggc tgggtcgcct
     4501 acatctcatt cggcgcgctc tactgcctcg tgccgtggct gtggaagcgc gacctctact
     4561 cgctcaagct cgtcgactgg catttctggg tgtcgaccct cggcatcgtg ctctacatca
     4621 cgtcgatgtg ggtggccggg atcatgcagg gcctgatgtg gcgcgcctat aacgcgctcg
     4681 gcttcctcga atactcgttc ctcgagacgg tcgaggcgat gcagcccttc tacctgatcc
     4741 gcgcggtcgg cggggtcctg ttcctggtcg gcgcgctgat catggccttc aacctctaca
     4801 tgaccatccg cggctatgcg gtgcgggaag cggagcgcgt tcctgcgctc gtgcccgccc
     4861 tcgtccccgc cgagtgagaa catcatggca agcgcccaac ccggtctctg gaacagacac
     4921 gcctttctgg aaaaaaactc catcctcctc gtcatagcca ttctgatggt ggcggcggtc
     4981 ggaggcctga tcgagatcgt gccgctgttc tacctgaaga gcacggttga gaaagtcgag
     5041 ggcatgcggc cgtacacgcc gctcgagctc gctgggcgta acatctatgt gcgcgaaggc
     5101 tgctatctct gtcacagcca gatgatccga tcgatgcgtg acgaggtcga gcgttacggc
     5161 catttctcgc tggctgcgga atcgatgtac gatcatccct tccagtgggg atccaagcgc
     5221 accggccccg acctggcgcg cgtcggcggc aagtattccg acgagtggca ccgcgatcac
     5281 ctgcgcgatc cccgtgccgt cgtgccgacc tcgatcatgc cgacatacgc gttcctcgac
     5341 cggccgctcg acgtcgagtc ggttgccgga gacctgaagg ccaatcgcgc gatcggcgtc
     5401 ccctacagcg acgagatgat cgccaaggcg cggagcgacg tgctcgcgca ggccaatccg
     5461 gacgacgccg gcgccgacga gttccagaag cgctatccga atgcggccgt gcgtgacttc
     5521 gacggcgacg cgaagcgggt caccgagatg gatgcgctcg tcgcctatct gcagatgctc
     5581 ggcacgctcg tcgatttcaa actctacgac cacaaggcca attcccgatg agcacgtaca
     5641 atttcctggc gcagttcgcc cagaccggcg gactccttta cttcgtcctg attttcgcgg
     5701 cggtcgtcgt gtatgcgctg cgcccgcgca accgcgcccg gttcgacgca gcggcgcgca
     5761 ttccgctgag caaggactga cgcgatgacc gaggcagcga agccgaccgt ggacgccgtt
     5821 tccggcacgg aaacaaccgg ccacgaatgg gacgacatcc gcgagctcaa caacccgctg
     5881 ccgcgctggt ggctctacgg cctttacgcc accatcgtct gggccatcgg ctattgcatc
     5941 gcctatccgg cctggccgct ggtgaacgac tacacccgcg gcctgctcgg ccactcccag
     6001 cgccaggcgg tgatggagga ggttgccacg gcgaaggcgg cgcgcggcgc gctcggcgag
     6061 gccatcgcca aggcctccct cgacgagatc cgcagcagtc ccgacctgct cgagctggcg
     6121 ctcgcgaacg gcaaggccgc cttcggcgac aactgcgcct cctgtcacgg cacgggcgcc
     6181 gcaggccgca cgggctatcc caacctgcag gacgacgaat ggctgtgggg cggcacgctc
     6241 gcggccatcc atcagacgat ccgcttcggc gcccggtccg gacacggcga ggcgcatgcc
     6301 ggcgagatgc tcgccttcgg ccgcgacggc atgctcaagc gtgtggagat cgaggcggtc
     6361 gccaattatg tcctgtcgct gtcccgcaag gcttacgacg gcaagctgag cctcgagcag
     6421 ggcaaggcga tcttcgagca gaattgcgtt gcctgtcacg gcgaccaggc gaagggcaac
     6481 caggagatgg gcgcccccga tctcacggac gcgatctggc tttacggcgc ctcgccgcaa
     6541 caggtcgtgg ccagcgtcac caacggccgc aagggcgtga tgcccgcctg ggaaggacgc
     6601 ctcgacccgg tcacgatcaa gtcgctcacg atttacgtgc acagcctcgg cggcggaaag
     6661 tagcgcccca tgctccacca cattgtcatt ccggggcggc cgaaggccga acccggaacc
     6721 cacgcctggg tgcgacaaaa aacgcagcgt aacacccggt cgtgggttcc gggctcctcg
     6781 cggagtttat catcgggccg gccgaaggcc ggacccgttg gctcggcccc ggaatgacga
     6841 gcgtttgcgc atttgcgcta ggtcaacgcg ccgatgcgcg tgcacccgta agtgacgggc
     6901 aactcgtttc tctgaccccc gcacagcgca ttaagaatca atgaaccaga ccgaagccgt
     6961 cgcgccggcg gtaagaacct acacgcttta cgaggcgcgc aagaaaatcc atcccctcgg
     7021 cgtcaagggc cgtttccgcc gcatcaagtg ggcggtgctg gtcgtgacgc ttgccatcta
     7081 ttacgtgctg ccgttcctgc gctgggatcg cgggccgcat gcccccgatc aggccatcct
     7141 cgtcgatctc gcgggcgggc ggttctactt cttcttcatc gagctctggc cgcaggaagt
     7201 ctactacatc acgggcctct tgatcctcgc agcgctgttg ctgttcctga tgaacgcggt
     7261 cgcggggcgc gtctggtgcg gctatctgtg cccgcagacg gtctggaccg accttttcat
     7321 cgccgtcgag cggctggtcg agggcgagcg gcgcgagcgc atcaggctcg acgcggcgcc
     7381 gtggacggcg gcaaaggtcg gcaggaaggt cgtcaagcat gcgatctggc tgatgatcgc
     7441 gtggtggacc ggcggcgcct gggttctcta cttcgccgat gcgccgacgc tcgtgcgcca
     7501 cctcgccgcc ttccaggcgc cgctggccgc ctacgtctcg atcgcgatcc tcaccctcac
     7561 gacctacacg ctcgccggct tcatgcgcga gcaggtctgc acctatatgt gcccatggcc
     7621 gcgcatccag ggcgcgctca ccgacgagca ctcgctcaac atcacctacc gttacgaccg
     7681 cggcgagccg cgcggctcgg ccaagaagaa cgactggctc agggcgcagg gacagccggc
     7741 cggagactgc gtcgattgcg gccaatgcgt cgccgcctgc ccggcgggga tcgacatccg
     7801 caacgggctg cagatggagt gcatccagtg cggcctgtgc gccgacgcct gcgacaccgt
     7861 gatgacgaag gtcggccgcc cgacggggct catcgcctac gacaccgacg aaaacatcag
     7921 gcgccgcctg cgcggcgagg cgccggtgat caagatcgtg cgtgcgcgca cgatcctcta
     7981 caccgccgtg atcgccatca ccggcgcggt gatgctgtat gcgctggcaa cgcgcagctt
     8041 caccgagatc agcgtgctgc acgaccgcaa cccggtgtac gtgaccctgg ccgacggcgc
     8101 gatccgcaac ggctacacgg tgcggatcct caacaagcgc ccattcgaac gccacttcac
     8161 cgtcgaggtc gagaacgtgc ccggcgcgcg cgtcgaggtc gtgggcgtcg atgaaagcgc
     8221 atcgggacat cccgtcgtga cgatcgggcc cgacacgacg cgcgaagtgc gcgccctcgt
     8281 cttcgcgccg gccggcgccc ggctcgccag gtcgacgccg atcacgctcc acctccgtga
     8341 taccgccggc ggcgagccgg cccatgcccg ggagtatttc aaagcgccat gacccaagct
     8401 gtctcgctct cctcgcgccg cctgaccgga tggcatgtcc tggccatcct gctcaccttc
     8461 ttcggcacga tcgccatggc cgacgccgtg ctgatctatt ccgccgtgcg cagctggacg
     8521 ggcgccgaga ccacgagcgc ctatcgcgcc ggccagctct acaacggcga gcgcgcgcag
     8581 gcgcagacgc aagccgccct cggctggcag gtggacgcca gagccgagcg ccggccggac
     8641 gacaccgtgc aggtgagcgt cgcggcgcgc gaccagggcg ggcgcccgct caccggcgtg
     8701 acctggggcg cggttctgca gcgcccgacg tcgcagcgtg acgaccgggt cgtggcgctg
     8761 aggcaaggcg cctatgcgca ggtcgcgatc atttccgatc tcgcaccggg gcaatgggac
     8821 ctcgtcgtcg aaggcagccg cggcggcgaa cgcgcctaca ggagcaagac ccgccttgtg
     8881 ctgcgctgat accgccgttg cctggttccc aggtcgcgga tgaggacgat ccgatgaacg
     8941 cgtttgcccg tgatttctct cccttcgtct cgctgaccgc cgaaggcgca agccgggtcg
     9001 agctcgccgt cgagggcgtg cgctgcgccg gctgcatgaa cgtcattgag aagggcctcg
     9061 gagctcttcc cggcgtggtg aaggcgcggc tcaatttcac cgaccggcgc ctcgcggtcg
     9121 aatggcgcgg cggcctcgac gtcacgcgcc tgctcgccga gctcgacgcg ctcggctacc
     9181 gcgcccaccc cttcgatccg aagcgctctg acgcggccga ggcgcgcgag gcgaagcagc
     9241 tcctgcgcgc cgtggcggtt gccggcttcg cgtcgatgaa catcatgctg atggcggttt
     9301 cggtgtgggc cggcaacgtc tccgacatca cgcccgagac gcgcgacttc ttccactgga
     9361 tgcaggcgct gatcgcgttg cccgccgcgg cctatgcggg ccgtcccttc tacgaaagcg
     9421 cgctcggcgc cgtccgcgcc ggccgcatga atatggacgt cccgatcacc ctcggcgtcg
     9481 tgctgtcgct cgtcatgtcg gtggtcgaga ccatcagcca cgccgagcat gcctatttcg
     9541 acggcgccgt gatgctgctg ttctttctgc tggtcggccg gttcctcgac cgcaacatgc
     9601 gccgccgcac ccgcaccttc gcggaaaacc tgtccgcgtt gagatgcgag accgccgcca
     9661 ggatcgggcc cgacggcgcc gtgcgcgacg cgccgctctc cgccgtgcgt ccgggcgacc
     9721 gcgtgctctt gcggccgggc gagcgcgtcg ccgtcgacgg cgtcgtcgag gacggcgcct
     9781 ccgagatcga tcagagcctt gtgacgggcg agacggccct cgccgcggtg gcgccgggca
     9841 gccgcgtcta cgcgggcgcg ctcaatgcat ccggcgccct cacagtgcgc gtcaccgctg
     9901 cctcgggcac gctcctcgac gaggtcaata cgctgctgtc tcgcgccctc gaggcgaagt
     9961 cgaacgccct ccggcttgcc gaccgcgcga cccgccttta cgccccactc gtgcacgtcg
    10021 ccgcagcggc gaccgcgctc ggctggctcg ccgccggcgc cggctggcac atggccgtgc
    10081 tcaatgccgt ggcggttttg atcataacct gtccgtgcgc gctcgggctc gccatcccgg
    10141 ccgtacaggt tgtcgcggca ggggcgctct tccgaagggg cgtgctgctc aacagcggcg
    10201 acgccctcga gcgtctggcc gaggtcgaca ccgtcgtgtt cgacaagacc ggcacgctga
    10261 cgctgccgga gcccagcctg atcgacgccg gccacgaccc caagacgctc gagcgggcgg
    10321 cgcggcttgc cttgtcgagc cggcacccgc ttgccggcgc gctggcggcg gccgcgcgcg
    10381 agcggcagcc ctggccgggc gcccaggagt cggccgggcg cggcgtgcag gcgagcgccg
    10441 gcggcgtcga gatgcggctc ggcagcgccg ccttctgcga ggccgggcgt gaggcggacg
    10501 cggcgctcgc gcgtcatccg gacgcgtccg tgatctgctt tcgcgaaggc gacgctccgc
    10561 cggccgtgtt cctcgtccgg caggcccttc gcgaggacgc cgccgacacg gtcgcggggc
    10621 tggcgcggcg cggctacgac gtcgtgatca tgtcgggcga ccgcgccccg gccgtcgcgg
    10681 cagccgccga cgcgctcggc gtccgcgact gggcggccga cctgcggccc gccgacaaga
    10741 tcgcgcgtat cgaggcgctc gagcgcgccg gccgcaaggt gctgatggtc ggcgacggcg
    10801 tcaacgacgc gccagcgctc gccgccgcga ccgtgtcgct gtcgcccgtc accgcggccc
    10861 atgtcagcca ggcggccgcg gacgcggtct tcatgggccg ccgtctcgcg ccggtggtcg
    10921 gcgcgctcca ggccggccgg caggccaggc ggctgatgat ggaaaacctg tggttctcgg
    10981 cgctttacaa cgtcgccgcg gttccgctcg ccgcgttcgg ctacctgacg cccctgatcg
    11041 ccgcaatcgc gatgtcgacc tcctcggtcg tcgtcacgct gaacgcgctg cgcgcgcgcc
    11101 ttgccacccg ggaggctcca tgaacgtgct cgtcttcatg atcccgatcg ccttgacgct
    11161 cggtcttctc ggcctcggcg ccttcctgtg gtcgctcaat accggtcagt tcgacgacat
    11221 cgacggcgcc gagtatcgcg tcatcggtga tgacgactag gcatggtcgc cgatagccgg
    11281 cacctcgcac cgttgaagca tgccgcagcc cgcggtccgg cgggtggctt gccgtacgca
    11341 agatttaggc ggaagacttc cctgagacga cacggcgagc ccggcataga acccccaaag
    11401 ggcctgctcg ggcactacct gccgacggct ccgacacggg ggatagacga tgagaacggt
    11461 cgcctgcttg ttttctcttc tcgcgctggc gctgctgtcg ccggcagccg cgcagcagcc
    11521 ggagaagcgc gtcgcgctcg tcgtcggcaa cgcggcctac gcggccggga cgctggcgac
    11581 gccggccaac gacgcgggcc tcgtcgcgca gacgctgcag gcggccggct tcgacgtcgt
    11641 cggcgcccgc gatctcgacc aggaggcgct gcgccgcgcc ttccgcgatt tcaacgacaa
    11701 ggccgccgcg tcaggcccgg ataccgtcgc ggtgatctac ctgagcggcc acggcctgca
    11761 gctcgagggc gaaaactatt tcgtgcccgt ggacgcgcgc atcgcgcggg acgccgacgt
    11821 gccggccgaa gcgctgcgca tctccgattt ctcgcgcccc ctggccgccc tgccgttgaa
    11881 agccggcatg atcatccttg acgcggcgcg cgccaatccg ttcgctcaag gcggcgcgcc
    11941 gctggccgga ggccttgcgc tcgtggagcc cgaggcgcgg atgctgctcg ccttcaacgc
    12001 cgcgcccaac acagtcgcgc cgcagggcca gggtgcttac ggcccttatg cgcaggcgct
    12061 cgccgaggtc atgcgcgaag gcggcctgcc gctcggcgac atgttcgacc gcgtccgctt
    12121 gcgcgttcac gagaccacca agggcgcgca ggtgccctgg cacgtgtcgc gcgtcgaggc
    12181 gccgttcgtg ttcttcgagc gcaccgccga cgcgcctccg cccttgaccg atacgtcgcc
    12241 cgccgcggct gcgcgcgcac ggcccttgcg cgatatcggg gtcaaggagg cttacgcgtt
    12301 ggccttggaa cgcgacagcg tcgagagcta ctcggaattc gtgtcggcct atggcaacga
    12361 tccgctcgcc aggcgcgcgc gcgccatgct ggcggcgcgg cgcgaggcgc tcacctggcg
    12421 gcgtacccgc gtcgtcgaca cgccggacgc ctactggtcg tatctgcgac gctatccacg
    12481 cgggccgcac gcgggcgatg cgcagcggcg gctccgggtc ctcgccgccg ccctcgagcc
    12541 tcccgaggcg ttcgcggaga tcgactacga cctgccgccg ccaccagtgg aggaggtcgt
    12601 ctacatcgaa cgtccggtga tcgtcctcga cgatccggtc tttgccttcg cgccgccgcc
    12661 gcccgcgcca ttctacctgc tgccgccgcc gccgctcgaa ttcgtgctgc tgccgccgcc
    12721 gccaccgccg gtcgccgtct acgtgctgcc gacgccggtc tacacgccgg ttcccgtctg
    12781 ggtgcgcccg cctgcctacg tgcgcgctcc gccgcccacc aacgtgatct tcaggaacgt
    12841 gcacaacacg gtgacgatca acagcgccac caacaccgtc acggtcagga cgccggcggg
    12901 tgcggtgcgc aggctggcgc caccggcgac agccgcggct ttccgtggcc ccgggttggc
    12961 agggcagggg ccgcgtagcg cgccccgcgc cggcgccgcg ctgctcgccc cgacgctgcc
    13021 gccctcgctc gtgcaacggg cgccgaccat ccggcccgcc tcggtgcaac ggtccggccc
    13081 tgggaacgcg ctcggcgccg cctcgaccct gcggggccaa ccacctacgg cgcgccttgc
    13141 tccggggcag cccttgccgg gcacgcgcgg ccagccgctg ccggcgactg cgcccacggt
    13201 gacgccggac cagagagtcc gaggcgccgg cgtgccggct gcgcgtggcc aggtcccagt
    13261 gcgcgcatcc ggcgcaccgt cggcccatgc ggctgccgcc gcgacgccgg acctgcggca
    13321 acggcaaatg catcagcaac agcttgaggc gcgccagtat cagctgcaac agcagcaagc
    13381 gcggcaatac cagctgcaac agcaacaggc gcggcaatat cagtcgcggc aacagccgct
    13441 gcagccccag cgggcgcaga cgctgtcaca gcagcaggtg cagcaggttc agccgcagcg
    13501 tcagtatcag acggcgccgc gccgttcgcc gccggagcag cgcagtggcg gccgccgtcc
    13561 gccgtgcgga cagccgggcc tcccggcct
//
LOCUS       DATAIQ010000070         1924 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_232385, whole genome shotgun sequence.
ACCESSION   DATAIQ010000070 DATAIQ010000000
VERSION     DATAIQ010000070.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1924)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1924)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1924
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_232385"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..277
                     /locus_tag="VHN20_01205"
     CDS             <1..277
                     /locus_tag="VHN20_01205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015668567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004814 - arginine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006420 - arginyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DALR anticodon-binding domain-containing
                     protein"
                     /protein_id="HEX2724415.1"
                     /translation="PPDEAAFAQDEERALARALGKARDDAAAAIAREDFEAAMLALSR
                     LRAPVDAFFDKVTVNADDARLRENRLRLLNAIRAATRDVADFSRIEG"
     gene            complement(438..686)
                     /locus_tag="VHN20_01210"
     CDS             complement(438..686)
                     /locus_tag="VHN20_01210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012452173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724416.1"
                     /translation="MSRITWRQDSVAGIPLNRFVGFVGEIEVGNVSYDGGNRFWVWAS
                     PLQEDAWGYGPSDEAAKAALELWLRKWLDNFRPFFEAR"
     gene            908..1552
                     /locus_tag="VHN20_01215"
     CDS             908..1552
                     /locus_tag="VHN20_01215"
                     /EC_number="2.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003599448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0018104 - peptidoglycan-protein
                     cross-linking [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HEX2724417.1"
                     /translation="MISRRTLLAGLAAAPVAACNPTRPEPTLAADDLSGWYVGYREDG
                     KHDIPIVDQTRLKPQFRRQTVAWTGGQAPGTIIADIDARFLYLVQGGNTAIRYGIGVG
                     RQGFSWRGTAIVGRKGVWPDWSPTTTMVSLKPDLPRHMKGGVDNPLGARALYLYQDGQ
                     DTLFRIHGTNEPWTIGSRVSSGCVRMLNEDVADLYERVPVGTTVLVRRTGQAGA"
     gene            complement(1590..1853)
                     /locus_tag="VHN20_01220"
     CDS             complement(1590..1853)
                     /locus_tag="VHN20_01220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012320702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3072 domain-containing protein"
                     /protein_id="HEX2724418.1"
                     /translation="MSRAKRARGRHEDPPDVKNPKAHPDPDSNQQKDPDEWVTGHEPM
                     TGAQASYLKTLSEEAHDRAAYDPELSKAEASKRIDELKHKTGH"
BASE COUNT          293 a          689 c          623 g          319 t
ORIGIN      
        1 cccgccggac gaggccgcct tcgcgcagga cgaggaaagg gcgctcgccc gcgccctcgg
       61 caaagcccgc gacgacgccg ccgccgcgat cgcgcgcgag gatttcgaag ccgccatgct
      121 ggcgctctcg cgcctgcgcg cgccggtcga tgcgttcttc gacaaggtca cggtcaacgc
      181 tgacgacgcg cgcctgcgcg agaaccgcct gaggctgctc aacgccatcc gcgcggcgac
      241 gcgcgacgtc gccgatttct cccgcatcga ggggtaagaa tcctcaccgt ttgtcattcc
      301 ggggcggcgc gcagcgccga acccggaacc cacgaccggg tgcggcggta gtcgatccct
      361 tctaccccgt cgtgggtacc gggctcacgc cttcggcgtg ccccggaatg acgagcttgg
      421 tgtgagggta cgaggattca cctggcttcg aagaacgggc gaaaattgtc gagccacttt
      481 cgcagccaga gctcgagggc ggctttcgcg gcctcgtcgg aggggccgta gccccaggcg
      541 tcctcctgca gcgggctggc ccacacccag aagcggttgc cgccgtcgta ggagacgttg
      601 ccgacctcga tctcgccgac gaagccgacg aaccggttga gcgggattcc ggcgacgctg
      661 tcctgccgcc aagtgattcg gctcattgcg cgattctgtc catcaactac caaccccgga
      721 gcgatccgcg gccctccgga cgacgggtga gaagctttgt cgcatcgtcg ccgcggccaa
      781 gcgtttccgg gacatcaccg cccgagtcgg cgatgggggg tcggagccgg aggcactgtt
      841 gcctcatggc caccaatact taacgcggcg ctgctagtga cggggagaac caaaaacatc
      901 cggacccatg atttcgagac gaaccctgct cgcgggtttg gcggctgccc ctgtggccgc
      961 gtgcaacccg acccgtcctg aaccgaccct cgcggccgac gacctgtccg gctggtacgt
     1021 cggctacagg gaagacggca agcacgacat cccgatcgtc gaccagacgc gcctcaagcc
     1081 gcagttccgc cgccagacgg tggcctggac cggcggccag gcgcccggca cgatcatcgc
     1141 cgatatcgac gcccgcttcc tctatctcgt ccagggcggc aacacggcga tccgttacgg
     1201 catcggcgtc ggccgccagg gtttctcgtg gcgcggcacg gcgatcgtcg ggcgcaaggg
     1261 cgtatggccc gactggagtc cgaccaccac gatggtcagc ctcaagccgg accttccgcg
     1321 ccacatgaag ggcggcgtcg acaatccgct cggcgcccgg gcgctctacc tctaccagga
     1381 cgggcaggac accctgttcc gcatccacgg caccaacgag ccgtggacca tcggctcgcg
     1441 cgtgtcgtcg ggctgcgtgc gcatgctcaa cgaggacgtc gccgacctct acgagcgcgt
     1501 ccccgtcggc accaccgtgc tggttcgccg caccggccag gccggcgcgt aaccgcggcc
     1561 actcggcgcc gctgcacgtt cgaccggcct caatggccgg tcttgtgctt cagctcgtcg
     1621 atgcgcttgg aggcttcggc cttcgacagt tcggggtcgt aggcggcgcg gtcgtgcgcc
     1681 tcttccgaca gggtcttgag atacgaggcc tgcgcgccgg tcatcggctc gtggccggtc
     1741 acccactcgt cgggatcctt ctgctggttt gaatccggat cgggatgcgc cttcgggttc
     1801 ttgacgtcgg gcgggtcctc gtgccgtccg cgcgcccgct ttgccctcga cattacttga
     1861 ctccgcacgt tcttgaattg ttcacgggaa caacgccccc gccacgcccg cggttccccc
     1921 ttcc
//
LOCUS       DATAIQ010000071         1503 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_3850, whole genome shotgun sequence.
ACCESSION   DATAIQ010000071 DATAIQ010000000
VERSION     DATAIQ010000071.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1503)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1503)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1503
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3850"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            83..>1503
                     /gene="ilvD"
                     /locus_tag="VHN20_01225"
     CDS             83..>1503
                     /gene="ilvD"
                     /locus_tag="VHN20_01225"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012453817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004160 - dihydroxy-acid dehydratase
                     activity [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009099 - valine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HEX2724419.1"
                     /translation="MDAKTKLKAKLPSRHVTEGPERAPHRSYYYAMGLTTAQIHQPFV
                     GVATCWNEAAPCNIALMRQAQAVKKGVAAAGGTPREFCTITVTDGIAMGHQGMKSSLP
                     SREVIADSVELTMRGHSYDALVGMAGCDKSLPGMMMAMCRLNVPSIFIYGGSILPGTF
                     KGKPVTVQDVFEAVGKYSVGAMSEADLEELEQVACPSAGACGAQFTANTMATVSEAIG
                     LALPYSAGAPAPYDLRDRFCATAGEMVVDLIRTQIRPRDIVTRKALENAATVVAASGG
                     STNAALHLPAIAHECGIKFDLFDVAEIFRRTPYVADLKPGGRYVAKDLFEVGGIPLLM
                     KTLLDHGFMHGDVLTVTGRTMAENLANVAWNPDQDVVRPANAPITPTGGVVGLKGNLA
                     PEGAIVKVAGMAKDRQTFRGPARCFDNEEACFEAVRNRQYKEGEVLVIRYEGPRGGPG
                     MREMLATTAALYGQGMGDKVALIT"
BASE COUNT          245 a          536 c          500 g          222 t
ORIGIN      
        1 gttttcccgg gtcgccggac cggatgggat gacagccaaa tccgcgagaa tggcggatgg
       61 gccggggggc ccggacacgt cgatggatgc caagaccaag ttgaaggcca agctgccgag
      121 ccgtcacgtg accgagggcc cggagcgggc gccgcatcgg tcctattact acgccatggg
      181 tctgaccacg gcgcagatcc atcagccgtt cgtcggcgtc gccacctgct ggaacgaagc
      241 tgccccctgc aacatcgcgc tgatgcgcca ggcccaggcc gtcaagaagg gcgtcgccgc
      301 ggccggcggc acgccgcgcg agttctgcac catcacggtg accgacggca tcgccatggg
      361 ccaccagggc atgaagtcgt cgctgccgtc gcgcgaggtg atcgccgact cggtcgagct
      421 gaccatgcgc ggccattcct acgacgccct cgtcggcatg gccggttgcg acaagtcgct
      481 gcccggcatg atgatggcca tgtgccgcct caacgtgccg tcgatcttca tctacggcgg
      541 ctcgatcctg cccggcacct tcaagggcaa gccggtcacc gtccaggacg tcttcgaggc
      601 ggtcggcaag tattcggtcg gggccatgtc cgaggccgac ctggaagagc tcgagcaggt
      661 cgcctgcccg tcggccggcg cctgcggcgc gcagttcacc gccaacacca tggccaccgt
      721 ctccgaggcg atcggcctcg cgctcccgta ttcggctggc gcgccggcgc cttatgatct
      781 acgcgaccgc ttctgcgcca ccgccggcga gatggtggtg gacctgatcc ggacgcagat
      841 ccgcccgcgc gacatcgtca cccgcaaggc cctcgagaac gccgccaccg tcgtcgccgc
      901 ttccggcggc tcgaccaacg cggccctgca cctgccggcg atcgcgcatg aatgcggcat
      961 caagttcgac ctgttcgacg tcgccgagat cttcaggcgc acgccctatg tcgccgacct
     1021 gaagcccggc ggccgctacg tcgccaagga cctgttcgag gtgggcggca tcccgctgct
     1081 gatgaagacg ctgctcgacc acggcttcat gcacggggac gtgctgaccg tcacgggccg
     1141 caccatggcc gagaacctgg ccaacgtcgc ctggaacccg gaccaggacg tggtccgtcc
     1201 ggccaacgct ccgatcacgc cgaccggcgg cgtcgtcggg ctcaagggca acctcgctcc
     1261 cgagggcgcc atcgtgaagg tcgccggcat ggccaaggac cgtcagacgt tccgcgggcc
     1321 ggcccgctgc ttcgacaacg aggaagcctg cttcgaggcc gtccgcaacc gccagtacaa
     1381 ggaaggcgag gtcctggtca tccgctacga gggcccgcgc ggcggcccgg ggatgcgcga
     1441 gatgctcgcc actaccgcgg cgctttacgg gcagggcatg ggcgacaagg tcgcgctgat
     1501 cac
//
LOCUS       DATAIQ010000072         1695 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_372652, whole genome shotgun sequence.
ACCESSION   DATAIQ010000072 DATAIQ010000000
VERSION     DATAIQ010000072.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1695)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1695)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1695
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_372652"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            206..1315
                     /locus_tag="VHN20_01230"
     CDS             206..1315
                     /locus_tag="VHN20_01230"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006021559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003871 -
                     5-methyltetrahydropteroyltriglutamate-homocysteine
                     S-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HEX2724420.1"
                     /translation="MKRKRPPFRADHVGSLLRTSALRQARARREQDEISAAELKAIED
                     REIEAVIRQQELIGLQSITDGEFRRAFWHIDFLERLDGVESYLGERAIKFKGDQPKPV
                     LLRVRGKLGTFRTHPMLDHFRFVKERTRRTPKMTIPSPSALHFRYGRQAVPEAIYPRM
                     EDFFHDLGETYRKAVRAFADAGCRYLQLDEVNLAYLCDPELRRQVQDRGDDPEALPGL
                     YADLINAAIAGAPDDMVVTMHLCRGNFRSNFVASGGYEPVADVLFNRIKVDGYFMEYD
                     TERAGGFEPLRLVPKDKTVVLGLVTSKSGILESRDILRRRIDEAARFVDIDQLCLSPQ
                     CGFSSTEEGNVLAEADQWSKLKLIVELAEEVWGTA"
     gene            complement(1316..>1695)
                     /locus_tag="VHN20_01235"
     CDS             complement(1316..>1695)
                     /locus_tag="VHN20_01235"
                     /inference="COORDINATES: protein motif:HMM:NF012804.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HEX2724421.1"
                     /translation="PLYHMSAFLGCGGCGIPVFDIRDGAGMTDMLIRTPELGKALAGS
                     LEDRPLVLMRGHGATIVGISIKQVVYRSIYSVQNAALQMDAIKLGEPVYLADEEAAKA
                     AESGDRVLERPWSLWKCEAVGEG"
BASE COUNT          315 a          559 c          551 g          270 t
ORIGIN      
        1 tggcccgact tcaaggacgg gatgccgccg cgtccgtcag ttctcgccat caccagacgc
       61 ggcggcggca agatcggctg aacgcacgaa acatcgatgg tgatcaagac ccggcagcgc
      121 attgctgccg ggcgcctagt ctgaggagct ttccctcgcg cggccgagtg gtatagcgaa
      181 cgaacgacac acaacgaggc aagggatgaa acgcaagaga ccgccgtttc gcgccgatca
      241 cgtcggcagc ctgctccgca caagcgccct caggcaggcg cgcgcgcgcc gcgagcagga
      301 cgagatcagc gccgcggagc tcaaggcgat cgaggaccgc gagatcgagg ccgtgatcag
      361 gcagcaggaa ttgatcggcc tgcagagcat caccgacggc gagttccggc gcgccttctg
      421 gcatatcgat ttcctcgaac ggctcgatgg cgtcgaatcg tatctgggcg agcgcgcgat
      481 caagttcaaa ggcgaccagc cgaagccggt gctgctgcgc gtcaggggca agctcgggac
      541 gttcaggacg cacccgatgc tcgaccactt ccgcttcgtg aaggagcgca cgcgccgtac
      601 gcccaagatg accattccga gtccgagcgc gctgcatttc cgttacggcc gccaggcggt
      661 cccggaagcg atctatccgc gcatggaaga tttcttccac gatcttggcg agacctaccg
      721 caaggcggtc cgcgccttcg ccgatgccgg ctgccgctac ctgcagctcg acgaggtcaa
      781 tctcgcctat ctgtgcgacc ccgagctgcg gcgccaggtg caggaccgcg gcgacgaccc
      841 cgaggctttg ccggggctct atgccgacct gatcaacgcc gcgatcgccg gcgcacccga
      901 cgacatggtc gtcaccatgc atctgtgccg cggcaacttc cgctcgaatt tcgtcgcctc
      961 gggcggctat gagccggtcg ccgacgtgct gttcaaccgc atcaaggtcg acggctattt
     1021 catggaatac gacaccgagc gcgccggcgg cttcgagccg ctgcggctgg tgcctaagga
     1081 caagaccgtg gtgctcggcc ttgtcacgtc gaaatcgggc atcctcgaaa gccgcgacat
     1141 cctcaggcgc cgcatcgacg aagcggcgag attcgtcgac atcgaccagc tgtgcctcag
     1201 tccgcaatgc ggcttctcct cgaccgagga aggcaacgta ctggccgagg ccgaccagtg
     1261 gtcgaagctc aagctgatcg ttgagctcgc cgaggaggtg tggggaacgg cgtgatcagc
     1321 cttcccccac ggcctcgcat ttccacaggc tccagggacg ctcgagcacg cggtcgccgg
     1381 actcggccgc cttggcggct tcctcgtcgg cgagatagac cggctcgccg agcttgattg
     1441 cgtccatctg cagcgccgcg ttctgcaccg agtagatcga acgatagacg acctgcttga
     1501 tggagatgcc gacgatggtg gcgccgtggc cgcgcatcag gaccaggggc cggtcctcga
     1561 gcgaaccggc gagcgccttg ccgagctcag gcgtgcggat gagcatgtcg gtcatgcccg
     1621 cgccgtcgcg gatgtcaaaa acgggaatgc cgcagccgcc gcagccgaga aacgcgctca
     1681 tgtggtagag cggcc
//
LOCUS       DATAIQ010000073         3243 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_280892, whole genome shotgun sequence.
ACCESSION   DATAIQ010000073 DATAIQ010000000
VERSION     DATAIQ010000073.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3243)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3243)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3243
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_280892"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..550
                     /locus_tag="VHN20_01240"
     CDS             <1..550
                     /locus_tag="VHN20_01240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724422.1"
                     /translation="RVTGVPTNTISGRARIPRNAPWVVPDAEAPRVVMNGLGGGVGPG
                     VTDLGPGTVDTLDRRNTTRFAAHGDAGDAVFLAAIRTHELHHANDHWLAGQAILGPWD
                     QALKDQMDDGRVHEAPTKDAARAKVYEEASGTPAELAAKLESLWVQLDSDFHATDEGR
                     PSQVKRFSVSNDGSSVDAFYDY"
     gene            676..1758
                     /locus_tag="VHN20_01245"
     CDS             676..1758
                     /locus_tag="VHN20_01245"
                     /inference="COORDINATES: protein motif:HMM:NF033542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HEX2724423.1"
                     /translation="MAQVRSWAGFDVHAAKIVAATVDARSGVLRFARLPGSTSGAVEF
                     CRALPGPVKVAYEAGPTGFGLARELAVAGIECVIAAPGKIARAPQDRVKTDRRDAERL
                     VRLLMAGELHPVRVPSTNEEALRDLVRAREDLRGDLMRARHRVGKLLLRHDLRFDGNN
                     WTQAHRDWLARVQLSEPVAQAVLEDGLGAIDALVVRRESFERQMTALVPGSPWATEIA
                     RLRCLRGIDTLSALGLCAEVGDFDRFRRPGQLMSYLGVVPSENSTGDKRRLGSITKSG
                     SQHARRLLVEAAWHYRRPPRVGRELARRQDGQSQHVTAISWQAQRRLHRTWQRLDHER
                     GKRRTLVAVAVARELAGFCWAVTTAD"
     gene            complement(2118..2612)
                     /locus_tag="VHN20_01250"
     CDS             complement(2118..2612)
                     /locus_tag="VHN20_01250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724424.1"
                     /translation="MSEVLNPEPLLRALQDAGVQHVIIGGFAVNAHGVIRPSKDLDIV
                     PDPDADNLRRLAALLAKIDARHAGLGDFNADEFPFDPTCPEDLQAGANFRLETRLGDL
                     DVMQWVAGIDADPAYGALAARAIDGELDGIALRVCGLEDLIAMKRAAGRPRDLDDLRR
                     LGAG"
     gene            complement(2609..2794)
                     /locus_tag="VHN20_01255"
     CDS             complement(2609..2794)
                     /locus_tag="VHN20_01255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724425.1"
                     /translation="MAADPKPREWTADEIRREEQAQRARVRRDAARGVSKNLTEAVSH
                     TEFAKRFADAFKRSRRA"
     gene            complement(2834..>3243)
                     /locus_tag="VHN20_01260"
     CDS             complement(2834..>3243)
                     /locus_tag="VHN20_01260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="fibronectin type III domain-containing protein"
                     /protein_id="HEX2724426.1"
                     /translation="VAIDAAGAALVTGTSWNGYLSIGETATDMVTLKFPAGAAPALVA
                     PSRLEASALSATQIGLRWQDGGGTEDGFRIERCAGTGCTAFSQVAVVGHDVTSYVDGG
                     LARNTAYSYRARAFNAGGVSTYSNTASAKTRRK"
BASE COUNT          490 a         1095 c         1171 g          487 t
ORIGIN      
        1 gcgcgtgacc ggcgtgccga ccaacacgat ctcgggcagg gcgcgcatcc cgcggaacgc
       61 gccgtgggtg gttcctgacg cggaggcgcc gagagtggtg atgaacgggt tgggcggtgg
      121 cgtagggcct ggcgtgaccg atctcgggcc ggggacggtc gacacgctcg accggcggaa
      181 cacgacgcgg ttcgcggcgc atggcgacgc tggggatgcc gtgttcctgg cggccatccg
      241 gacgcacgag ctgcatcacg cgaacgatca ctggctggcg gggcaggcga tcctcggccc
      301 gtgggaccag gcgctcaagg accagatgga cgacggccgc gtgcacgagg ctccgaccaa
      361 ggacgcggcg agggcgaagg tctacgagga ggccagcggc acgccggccg agcttgcagc
      421 caagctggaa agcctctggg tgcaactcga cagcgacttc cacgcgacgg acgaggggcg
      481 accgtcccaa gtgaagcgct tctccgtgag caacgacgga tcgagcgtcg acgccttcta
      541 cgactactag accatatggc cggtcgggcc tgatgcgtcc gtggtggatg tgagggtcgg
      601 cacccgcgca tgagctgcgc gggttgaccg tcgaggagtg gcctcggcgg cgaccgcaat
      661 catgggggtg ccgacgtggc acaggttcgc agctgggctg gctttgacgt gcatgcggca
      721 aagatcgtcg cggcgacggt ggacgcgcga tcgggcgtgc tgcgcttcgc gcggctgccg
      781 gggtcgacga gcggggcggt cgagttctgc cgggcgttgc cggggccggt gaaggtggcc
      841 tatgaggccg gcccgaccgg cttcggactg gcgcgcgagc ttgccgtcgc cgggatcgag
      901 tgcgtgatcg cggcgccggg caagatcgct cgggcgccgc aggaccgggt caagaccgac
      961 cggcgcgacg cagagcgcct cgttcggctg ttgatggccg gggagctgca tccggtccgg
     1021 gtgccgtcga cgaacgagga ggcgttgcgc gacttggtgc gtgcgcgcga ggacctgcgt
     1081 ggcgatctga tgcgcgcgcg gcaccgcgtc ggcaagctgc tgctgcgaca cgacctgcgc
     1141 tttgacggca acaactggac ccaggcgcac cgcgactggc tcgcccgggt gcagctctca
     1201 gagccggtcg cccaagcggt gctcgaagac gggctgggcg cgatcgacgc gctggtggtc
     1261 cgccgcgaga gcttcgagcg ccagatgacc gcgctggtcc cgggctcgcc atgggcgacc
     1321 gaaatcgccc ggctgcgctg cctgcgcggg atcgacacgc tctccgcgct tggcctgtgc
     1381 gccgaggtcg gcgactttga ccgcttccgt cggcccggcc agttgatgag ctacctcggc
     1441 gtcgttccgt cggagaactc gaccggcgac aagcgtcggc tggggtcgat cacgaagtcc
     1501 ggcagccagc acgcccgccg gctcttggtc gaagccgcct ggcactaccg gcgcccgccc
     1561 agggtcgggc gcgagctcgc gcgccgccaa gacggccagt cgcagcacgt gaccgcgatc
     1621 agctggcagg cccagcgccg actgcaccgc acctggcaac ggctcgatca cgagcgcggc
     1681 aagcgccgca ccctggtcgc ggtcgccgtc gcgcgcgagc tcgccggctt ctgctgggcg
     1741 gtcacgaccg ccgactgacc cggccgacag cacgacgttg gtcgagcagg cggcgggacg
     1801 gcccccttcg cgccagcgca cccgcgattg agctatgagc aaccccctgg ggcgacgctc
     1861 gatcctagac cgcgggcgct gagacgaaac ccggtcctgc ggccacccgg atccgcgcat
     1921 atcagcctga ccgcgcgtcg cgcacccggg ccacccgccg ccccctcgac caacaaaaat
     1981 gcccgctcac acgggcattt cgtgctgcgc gcttgacagg acgacgtcca tatcagctga
     2041 acgctgcatg caacgaggtc gcgggatgta ggtgcgttcg tgacgcattc agctgaactg
     2101 ctcgtcgact ctggtactta gccggcaccg aggcggcgaa ggtcgtccag atcgcgcggg
     2161 cgccccgcag cacgtttcat tgcgatcagg tcctcgagtc cgcagacacg gagtgcgatt
     2221 ccgtcgagtt ccccgtcgat ggcacgtgcg gcgagcgcgc cataggccgg atctgcatcg
     2281 atgcccgcga cccactgcat cacatccaaa tcccccaaac gggtctcgag ccggaagttt
     2341 gctcccgcct gaaggtcctc agggcatgtt gggtcgaacg ggaactcgtc cgcgttgaag
     2401 tcgccgaggc cggcatgccg cgcgtcgatc ttggcgagga gtgccgccag ccgtcgcaag
     2461 ttgtcagcat caggatcggg cacgatgtca aggtccttgg agggacggat cacgccgtgg
     2521 gcgttgaccg caaagcctcc gatgatgacg tgctgcacgc ctgcgtcctg cagcgcccgg
     2581 agcaacggct ccggattgag gacctcgctc atgccctccg cgaacgcttg aaggcgtcgg
     2641 cgaaccgctt cgcgaactcg gtgtgagaca ccgcctccgt gaggttcttg gacacgccgc
     2701 gggcggcgtc gcggcgaacg cgagctctct gcgcctgctc ttcgcggcgg atctcgtcag
     2761 ccgtccactc tcgcggcttg gggtcggcgg ccatagtcag atcgtacgcc gcccggcggt
     2821 cggcgcctgg cggtcacttg cggcgggtct tcgctgacgc cgtattcgag tacgtagaga
     2881 cgccgccggc gttgaacgct cgcgctcgat atgagtacgc ggtgttccgt gccaggccgc
     2941 cgtcgacgta gctggtcacg tcgtgaccga ctaccgcgac ctgcgagaac gccgtgcagc
     3001 cggttcccgc gcaccgttcg atgcggaagc cgtcctcggt gccgccgccg tcctgccatc
     3061 gcagcccgat ctgggtcgca gacagcgcgc tggcctcgag ccggctcggt gcgaccagcg
     3121 cgggagccgc gccggcgggg aacttcagcg tgaccatgtc ggtcgcggtc tcgccgatcg
     3181 agaggtagcc gttccacgag gtgccggtga cgagcgcggc cccggcggcg tcgatcgcca
     3241 cgc
//
LOCUS       DATAIQ010000074         1678 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_372817, whole genome shotgun sequence.
ACCESSION   DATAIQ010000074 DATAIQ010000000
VERSION     DATAIQ010000074.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1678)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1678)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1678
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_372817"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            297..542
                     /locus_tag="VHN20_01265"
     CDS             297..542
                     /locus_tag="VHN20_01265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724427.1"
                     /translation="MNRLSTVLILTGLASVLTPVVVSATGITPSKPAVQAESKAEAAP
                     AQARAEEPACTRRVKVVYAGYGEGRGAACTVTADIQR"
     gene            629..1354
                     /locus_tag="VHN20_01270"
     CDS             629..1354
                     /locus_tag="VHN20_01270"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEX2724428.1"
                     /translation="MALRAILFDKDGTLIDFDATWGPAAYEVMRALAAGDERAFAELI
                     RVSEYIEPERRFLPTSPLVAGSSAHYGPAWAQALGRPPGTDLYREMDELFRVWGLRNL
                     APIGEPAAVARALAERALRLGIATNDAEASARSQAEALGLLPFLDFIAGYDSGFGGKP
                     HPGMVLAFAGRLGLEAGEVALVGDSLHDLETARLAGAVGIAVLTGPLRGSARAELEPH
                     ADYVIDSIADLPAFVDGLGGSRH"
     gene            complement(1409..>1678)
                     /locus_tag="VHN20_01275"
     CDS             complement(1409..>1678)
                     /locus_tag="VHN20_01275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEX2724429.1"
                     /translation="TKGNVSGLVDRLVEAGLVERRAIPGDRRSHALHLTRAGRALAEQ
                     GIAAQDAYVRRTLGRLSRADLAELNRIVLAWRETARADGSSTVSE"
BASE COUNT          237 a          620 c          574 g          247 t
ORIGIN      
        1 cgggcggagg ctacggccca tcccgccgga ccaggagcgc gtgacgcaat gccatgcctg
       61 ccccggatca catccggggc aggctttcgc cggacgaagc cgacgggcgc gcgtcgaccc
      121 cgcgctcctg accgccacca agctttgtca ccgcgctgga acgaagacgc cagctgcgca
      181 tttctgaaaa gccaagttct tcgaccacgt gcgcgagcgc accgcgaccg cctcccggcc
      241 gggggaaggt tgcgacacag cagcccgcac gtgctgccga ccgcagggag caaacaatga
      301 accgcctttc gaccgtcctg atcctgaccg gcctggcttc ggtcctgacg cccgtcgtcg
      361 tgagcgccac cgggatcact ccgagcaagc cggccgtcca ggccgagagc aaggccgagg
      421 cggcgcccgc ccaggcccgc gccgaggagc cggcctgcac ccgccgggtc aaggtggttt
      481 atgccggcta cggcgagggc cgtggtgccg cctgcaccgt cacggcggac atccagcgct
      541 gatccaaaac cgcgggcagg ctggccgcct tgcgatccaa ggcgtcccgt gacaaccacg
      601 tcgcctatgc atgcggaggc cagccggcgt ggcgttgcgc gcgatccttt tcgacaagga
      661 cggaaccctc atcgacttcg acgccacgtg gggccccgcg gcctacgagg tgatgcgcgc
      721 cctcgcggcc ggcgacgaga gagcgttcgc cgagctcatc cgcgtcagcg aatacatcga
      781 gcctgagcgc cgcttcctgc cgacctcgcc gctcgtcgcg ggctcctcgg cgcattacgg
      841 gccggcctgg gcgcaggcgc ttggccggcc gccgggcacc gatctctacc gggagatgga
      901 cgagctgttc cgcgtatggg gcctccgcaa ccttgccccg atcggcgagc cggccgcggt
      961 agcccgcgcc ctcgccgagc gggcccttcg cctcggcatc gccaccaacg acgcagaggc
     1021 ctcggcacga agccaggccg aggcgctggg gctgctgccg ttcctcgact tcatcgccgg
     1081 ctacgattcc ggcttcggcg gcaagccgca tcccggcatg gtgctcgctt tcgccggtcg
     1141 cctcggcctg gaggccggtg aggtcgccct cgtcggtgat tccctgcatg acctcgagac
     1201 ggcccgtctg gctggggcgg tcggcatcgc ggtgctcacc ggcccgctca ggggctccgc
     1261 ccgcgccgag ctcgagccgc atgccgatta cgtgatcgac tcgatcgccg acctgcccgc
     1321 tttcgtcgac ggtcttggcg gcagtcggca ctaggcgtcg tctatcgact ggctattgcc
     1381 gctgccgatg ggcttcaatc gcaacttgct actcgctgac cgtgctggac ccatcggccc
     1441 gggccgtctc gcgccatgcg agcacgatgc ggttgagctc ggcgagatcg gcgcgcgaca
     1501 gccggccgag ggtgcggcgc acataggcgt cctgggcggc gatgccctgc tcggccaagg
     1561 cgcggccggc gcgggtcagg tgcaaagcgt gcgagcggcg gtcgcccggg atggcgcggc
     1621 gctcgacgag cccggcctcc accagccggt cgacgagccc cgagacgttt cccttggt
//
LOCUS       DATAIQ010000075         4318 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_419261, whole genome shotgun sequence.
ACCESSION   DATAIQ010000075 DATAIQ010000000
VERSION     DATAIQ010000075.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4318)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4318)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4318
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_419261"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..471)
                     /locus_tag="VHN20_01280"
     CDS             complement(<1..471)
                     /locus_tag="VHN20_01280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019403616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEX2724430.1"
                     /translation="MSEGALTKAATAIDKHVGRRVRMRRMLIGMTQEKLGEALGLTFQ
                     QVQKYEKGTNRIGASRLHQIAAILGVPVEFFYEGAPALGGKTSASELPASYGSEFLAT
                     PEGVQLMKAFTRIRNERIRRRVIDLLLALGDTEQGGDDDEVTIAEAARRGRTSGR"
     gene            complement(772..1557)
                     /locus_tag="VHN20_01285"
     CDS             complement(772..1557)
                     /locus_tag="VHN20_01285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018387594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /protein_id="HEX2724431.1"
                     /translation="MSFAPLPIDRAIAEFETCTTMQELRDKLQKVSENYGFASFNFLD
                     TGQPHLDLPFYVGTTGEAWEREYISNKFVHVDACVAHARVTNVPFHWGAVALPSYKGR
                     RKPGAIKTMEAARDHGFQEGLVVPYHFADRLGRTHSSLIVFYWKDAASRFAFLMRERR
                     HDLHLLMIYWAQRAVDIIATAHRNRAAVIRDDLAGEVTLTDRERDVVAWAARGKTGVD
                     TAEILRISEDTVDTHMRSVMRKLNASNKTHAVAKAIYFGLISG"
     gene            1628..2284
                     /locus_tag="VHN20_01290"
     CDS             1628..2284
                     /locus_tag="VHN20_01290"
                     /inference="COORDINATES: protein motif:HMM:NF012967.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-homoserine-lactone synthase"
                     /protein_id="HEX2724432.1"
                     /translation="MLERWGRFRAIMCTEEQNPSVVDDLYRFRKGLFVDRLGWALAVE
                     DGRERDQFDTDAAVHCALFEGPQLIGGFRAIRTDHSYLAQTVFPFLASLKPYPRQRNA
                     WEISRFGVRPGGGGGPALMIYALMFRFAHTRQAATLVAVADLQHERLLARFGIRTRRY
                     GPPHVVGETQDGSPILAVAGEIPVREQTGARFSSLLEFSKDVEIDDEALVLGPARVSA
                     "
     gene            2244..3530
                     /locus_tag="VHN20_01295"
     CDS             2244..3530
                     /locus_tag="VHN20_01295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018387592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HEX2724433.1"
                     /translation="MKHWFSDLHAFRRDPLQFLCDRGNAANEALEPLALGPRPVFLLT
                     DPELIRPLLKADEQDVDKGRFIRKLRPIVGMSSLVISGEEHRRRRAVLHEHLAKGGAE
                     KLIPQLSAEIRAVAAQLVREGSFNPHQVTAPLTLRLICVALFGRQVLSAGDEQALVAA
                     VHSVEDELAQDMFRVVPTPWTWLASRARRGFAKRAMSVVVQRLRAAAAETSTLASLER
                     LDLSDDELRDEILTLLLAGHHTTGSTSAWLLYHLATEPGLMDAVAAEAAAASDCNGEI
                     RAERLKHAPISLALVREVLRLYPAAWWFSREIKRPTPIGGRILTRGSSVLISPWQLHR
                     DPRHWHEPEQFRLDRAYTGRAYVPFGGGPRACIGMGIAMLELQLLALELAAAYRFVNA
                     TPYPAPRPKASVTLIPPEITIAIRLRHTHQAQASAA"
     gene            3561..3806
                     /locus_tag="VHN20_01300"
     CDS             3561..3806
                     /locus_tag="VHN20_01300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724434.1"
                     /translation="MKKNITFLSLAPDLMLPPDDSTSEIVMLSVLIRTSIEIAAKQGL
                     VDTEHELRRALLGIHLEAPEAASLAVLATSNSRSNPS"
     gene            complement(3899..>4318)
                     /locus_tag="VHN20_01305"
     CDS             complement(3899..>4318)
                     /locus_tag="VHN20_01305"
                     /inference="COORDINATES: protein motif:HMM:NF012401.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HEX2724435.1"
                     /translation="DPFADKFMTFQGTQFSRATEFDQAGLWALGTHIVRVQYPGWHAA
                     HTFEGPLLRDVLSAAGVASGVVQPVALDGYAADIPYADLERWPVILALKMDGRWLPLG
                     GAGPAWVIYPRDDFADLAQSDDAKWVWGVSHIRVPRR"
BASE COUNT          685 a         1510 c         1397 g          726 t
ORIGIN      
        1 gcgcccggag gtgcggccgc ggcgcgcggc ctcggcgatc gtcacttcgt catcgtcgcc
       61 gccctgctcg gtgtcgccga gggccagcag gaggtcgatg acgcgacggc ggatgcgctc
      121 gttgcggatg cgcgtgaacg ccttcatcag ctgcacgcct tccggcgtcg ccagaaactc
      181 cgagccgtag ctggccggca gctccgaggc gctcgtcttc ccgccgagcg ccggcgcgcc
      241 ctcgtagaag aactctacgg ggacgccgag gatggcggca atctggtgca gccggctggc
      301 gccgatgcgg ttggtgccct tctcgtattt ctgcacctgc tggaaggtga gcccgagggc
      361 ttcgccgagc ttctcctggg tcatgccgat cagcatgcgg cgcatgcgca cgcggcgccc
      421 cacatgcttg tcgatcgcag tcgctgcttt ggtcaacgcc ccttcgctca tcggctttgt
      481 cctttatcgt tcgtggtcac ggtggcttcc ctgtttgcac acgcgcgccg gcgtcgtgcc
      541 ggtctcgcgt gcccctgccc caattgcgcg ccgcggcgcc cctgccgcgg cggtgttaac
      601 gggctctaga tgagcccaag ctgaatggcg agcgctgctt caactcaaag taaacggcag
      661 gcccggcgcg tgcgcccgtt catgtgccaa gccattgagc ttcatgcaag atcctgttta
      721 cagaccgatc cttcaccttt cggccgggcc gcctggccct ccccgaccgc ctcacccgct
      781 gatcagcccg aagtagatgg ccttggccac ggcatgggtc ttgttgctgg cgttgagctt
      841 gcgcatcacg ctccgcatat gggtgtcgac ggtgtcttcc gagatcctga ggatctcggc
      901 cgtgtcgacc ccggtcttac cgcgggcagc ccaggccacc acgtcgcgct cccggtcggt
      961 cagcgtcacc tccccggcga ggtcgtcgcg aatcacagcc gcccggttcc tgtgcgcggt
     1021 ggcaatgatg tccacggcgc gctgcgccca atagatcatc aacagatgca ggtcgtggcg
     1081 gcgctcgcgc atcaggaaag cgaacctgct cgccgcgtcc ttccagtaga acacgatcag
     1141 gctcgaatgc gtacgcccga gccggtcggc gaaatggtaa gggaccacga gcccttcctg
     1201 gaagccgtgg tcgcgcgccg cctccatggt cttgatcgcg ccaggcttgc gtcgcccctt
     1261 gtaggacggc agggccacgg cgccccagtg gaacggaacg ttggtgacgc gagcatgcgc
     1321 aacgcacgcg tcgacgtgaa cgaacttgtt cgagatgtat tcgcgctccc acgcctcgcc
     1381 ggtggtgccg acgtagaacg gcaggtcgag atgcggctgg ccggtgtcga ggaaattgaa
     1441 cgacgcgaag ccgtaattct cgctcacctt ctgcagcttg tcccgcagct cctgcatcgt
     1501 cgtgcaggtc tcgaactcgg cgatggcgcg gtcgatcggc agcggcgcaa aactcacgga
     1561 tttccgtgat accggaggcg ccggctcaag gacaagctcc cccacgggct cgggggggta
     1621 agtggcgatg ctggaaaggt ggggtcgatt ccgtgccatc atgtgcaccg aggagcaaaa
     1681 tccatcagtc gttgacgatc tgtaccggtt ccgaaagggg ctgttcgtcg accggctggg
     1741 atgggcgctt gcggtcgaag atggccgcga gcgcgaccag ttcgacaccg acgccgccgt
     1801 gcattgcgcc ctgttcgaag ggccgcaact gatcggcggc tttcgcgcca tccgcacgga
     1861 tcatagctac ctcgcccaga cggtctttcc cttcctggcg agcctaaagc cgtacccgcg
     1921 ccagcgcaac gcctgggaga tcagccgctt cggagtgagg cccggcggcg ggggtgggcc
     1981 agccctgatg atttacgccc tgatgttccg cttcgcccat acccgacagg cggcgacgct
     2041 cgtcgccgtc gccgacctgc agcacgagcg gcttctggca cgcttcggca tccgcacccg
     2101 ccgctacggc cccccgcacg tggtgggaga aacccaggac ggcagcccga ttttggctgt
     2161 cgccggcgag atacccgttc gcgagcagac gggcgcccgt ttcagcagcc tgctcgaatt
     2221 ctcaaaagac gtggagattg acgatgaagc attggttctc ggacctgcac gcgtttcggc
     2281 gtgacccgct gcaattcctt tgcgaccgcg gcaacgcggc gaacgaggcg ctggagccac
     2341 tggctctcgg cccacgcccg gtctttctgc tcaccgatcc ggagctgatc aggccgctgc
     2401 tcaaggcgga cgaacaggac gtcgacaagg gacgcttcat ccgtaagctg cggccgatcg
     2461 tcggcatgag ctcgctggtg atcagcggcg aagagcaccg ccgccggcgc gcggtgctgc
     2521 acgagcacct cgccaagggc ggggccgaga agctgatccc gcagctctcc gccgaaattc
     2581 gcgcggtcgc cgcgcagctc gtgcgcgagg gctcgttcaa cccgcaccag gtcaccgctc
     2641 cgctcacgct gcgcctgata tgcgtcgctc tgttcggccg gcaagtgctc tcggccggcg
     2701 acgagcaggc gctcgtcgcc gcggtgcatt cggtcgaaga cgagctcgcg caggacatgt
     2761 tccgggtcgt gcccacgccg tggacgtggc tcgccagccg cgcacgccgc ggcttcgcca
     2821 agcgcgccat gtcggtggtc gtgcagcgcc tgcgcgccgc cgcggccgag accagcacgc
     2881 tcgcctcgct cgagcgcctc gatctcagcg acgacgagct gcgcgacgag atcctcaccc
     2941 tgctcctcgc cggccaccac accaccggct cgacgtcggc ctggctgctt tatcatctcg
     3001 ccaccgagcc gggtctcatg gacgcggtgg cggcggaagc cgccgcagcg agcgactgca
     3061 acggcgagat ccgcgccgag cgtctcaagc acgcgccgat cagcctggcg ctcgtgcgcg
     3121 aagtgctgcg gctgtacccg gctgcgtggt ggttttcgcg tgagatcaag cggcctaccc
     3181 caatcggcgg gcgcatcctg acgcgcggca gctcggtgct gatcagccca tggcagctgc
     3241 accgcgatcc ccggcactgg cacgaacccg agcagttccg tctcgatcgc gcctacacgg
     3301 gccgtgccta cgtgccgttc ggcggcggcc cgcgcgcctg catcggcatg ggcatcgcga
     3361 tgctcgagct gcagcttctc gccctcgagc tggccgctgc ctaccgcttc gtcaacgcga
     3421 cgccgtatcc cgcgccacgc ccgaaagcgt cggtgacgct gatcccgccg gagatcacga
     3481 ttgccatccg gctgcgccac acgcaccagg cccaggcctc ggcggcgtga caatcccacc
     3541 tgcggagaac aggtcaaacg atgaagaaaa acatcacctt cttaagcctg gcccctgacc
     3601 tgatgctgcc gccggatgac agcaccagcg agatcgtcat gctgtcggtc ctgatccgca
     3661 ccagcatcga gattgcggcc aagcaggggc tcgtggacac cgagcacgag ctcagacgcg
     3721 ccctgctcgg cattcatctc gaagcgccgg aggccgcgtc gctcgccgtc ctagccacct
     3781 ccaacagccg ctccaaccca agctgaggag acacgcctct tcctgttatg cgcgtgcccc
     3841 cgactccgca ggggtgggcg ccgtcggccc tcccgctgag ggagacggtc accgctcgtc
     3901 agcgtcgcgg gacgcggata tgcgagacgc cccagaccca cttggcgtcg tcgctctggg
     3961 caaggtccgc gaagtcgtcg cgcgggtaga tgacccaggc ggggccggct ccgccgagcg
     4021 gcagccagcg gccatccatc ttgagtgcca ggatcacggg ccatcgctcg agatcggcgt
     4081 acgggatgtc ggccgcgtag ccgtcgagcg cgacaggttg cacgacgccg ctcgcgacgc
     4141 ccgccgcaga gagcacgtcc ctgagcagag gcccttcaaa ggtgtgcgcc gcgtgccagc
     4201 ccggatactg cacgcgcacg atgtgcgtcc cgagagccca cagacccgct tggtcgaact
     4261 ccgtggcgcg cgaaaactgc gtgccttgga acgtcatgaa cttgtcggcg aacggatc
//
LOCUS       DATAIQ010000076         2830 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_96207, whole genome shotgun sequence.
ACCESSION   DATAIQ010000076 DATAIQ010000000
VERSION     DATAIQ010000076.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2830)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2830)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2830
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_96207"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..537
                     /locus_tag="VHN20_01310"
     CDS             <1..537
                     /locus_tag="VHN20_01310"
                     /inference="COORDINATES: protein motif:HMM:NF028004.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P460 family protein"
                     /protein_id="HEX2724436.1"
                     /translation="RSRVIAAGAVAFAITISGAAAQVRISGDKIGFPQHFMQGTLYTT
                     VDRADNKQFRELFVSPPAAIEAARKGEPLPAGTVLTLVQYRAQLDAQGNPAKGPDGRF
                     VKGEIAAYTVMEKRAGWCADVPEDIRNGDWLYQAFTADGKPNPNANLTACFQCHKPLG
                     TAVDFVYSYDRLKGAAVK"
     gene            638..1084
                     /gene="msrB"
                     /locus_tag="VHN20_01315"
     CDS             638..1084
                     /gene="msrB"
                     /locus_tag="VHN20_01315"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008970377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033743 - peptide-methionine (R)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HEX2724437.1"
                     /translation="MLSRLFGGPESEAKEGQQFPVSKTDQEWRAQLTPEQYRVLREHG
                     TERAGTSPLNHEKRTGTFACAACGTPLFTSETKFESGTGWPSFFRPLDGAVETSDDTS
                     FFMKRTEVHCARCGGHLGHVFEDGPAPTGLRYCMNGVSMTFKPAET"
     gene            1098..1730
                     /gene="msrA"
                     /locus_tag="VHN20_01320"
     CDS             1098..1730
                     /gene="msrA"
                     /locus_tag="VHN20_01320"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007199314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008113 - peptide-methionine (S)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_function: GO:0033744 -
                     L-methionine:thioredoxin-disulfide S-oxidoreductase
                     activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HEX2724438.1"
                     /translation="MKGLWLALAVAAALASGSARAEDERTQLAPEAPAGLALATFAGG
                     CFWCMEPPFDKLAGVVSTTSGYTGGRAPGATYKEVSRGGTGHTEAVRVVYDPGKVSYE
                     ELVDTFWKNVDPLDPEGQFCDQGDMYRPAIFTHDDKQKAIAEASKSAFAASGRFKDPI
                     VVTVEPAREFWVAEDYHQDYYLKNPLTYAYYRWGCGRDARLEELWGKPGS"
     gene            1954..2508
                     /locus_tag="VHN20_01325"
     CDS             1954..2508
                     /locus_tag="VHN20_01325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017484108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YidB family protein"
                     /protein_id="HEX2724439.1"
                     /translation="MALLASRGLGHGGGLGGMLGGGRADHAPSAGHAVGPSGIDTSVL
                     YPGGGPVGGGVAGGVVDPSAGPLGGSTDEMGGGFGGGLGGRATGLDGILGGGLGSLIE
                     RFSRSGHGDILGSWIGTGENRRITPGELHHVLGDDTIDALAEETGMPRRDLLAELSET
                     LPDVVDRLTPEGRVPDDDEMGRWV"
BASE COUNT          458 a          954 c          980 g          438 t
ORIGIN      
        1 cgctcgcgcg tcatcgcggc cggtgcggtc gcgttcgcca tcaccatctc gggcgcggca
       61 gcccaggtcc gcatcagcgg cgacaagatc ggctttccgc agcatttcat gcagggcacg
      121 ctctacacga cggtcgatcg cgccgacaac aagcagttcc gcgagctgtt cgtctcgccg
      181 ccggcggcga tcgaggcggc caggaaaggc gagcccctgc cggccggcac ggtgctgacg
      241 ctggtgcaat accgggcgca gctcgacgcc cagggcaatc cggccaaggg cccggacggc
      301 cgcttcgtca agggcgagat cgccgcctac acggtgatgg aaaagcgcgc cggctggtgc
      361 gccgacgtgc cggaggacat ccgcaacggc gactggctct accaggcctt cacggccgac
      421 ggtaagccga atccgaacgc caacctgacc gcctgtttcc aatgtcacaa gccgctcggg
      481 acggcggtgg atttcgtcta ctcatatgac cggctcaagg gcgcggcggt gaaatagcgg
      541 caggccctgt ggcgcgttgc cgggaacgcc gcgtggcgcg ccggcgctcc cgtcgccata
      601 tcaggggcga cgatgcatgg agagacgcaa catgacgatg ctgtcgcgct tgttcggagg
      661 ccccgagtcc gaggccaagg aaggccagca gtttccggtc agcaagaccg accaggaatg
      721 gcgcgcgcaa ctcacccccg agcaataccg cgtgctgcgc gagcacggca ccgagcgcgc
      781 cggcaccagc ccgctcaatc acgagaagcg cacaggcacc ttcgcgtgcg cggcctgcgg
      841 cacgccgctg ttcacgtccg aaacgaagtt cgaatcgggc accggctggc cgagcttctt
      901 caggcctctc gacggcgccg tcgaaacgtc cgacgacacc tcattcttca tgaagcgcac
      961 ggaggtgcat tgcgcacgtt gcggcggcca tctcggccat gtcttcgaag acggtccggc
     1021 gccgaccggc ctgcgctact gcatgaacgg cgtttcgatg acgttcaagc ctgcggagac
     1081 gtaagcggga ggcatcgatg aagggattgt ggctcgctct tgccgtcgcg gcggcgctcg
     1141 cctcgggaag tgcgcgcgcg gaggacgagc gcacgcagct cgcgcccgaa gcgccggccg
     1201 gcctggcgct cgccaccttc gcgggcggct gcttctggtg catggagccg cccttcgaca
     1261 agcttgccgg cgtcgtgtcg acgacgtcgg gctacaccgg cgggcgtgcg ccgggcgcta
     1321 cctacaagga agtgtcgcgc ggcggcaccg gccataccga ggcggtgcgc gtcgtctacg
     1381 atcccgggaa ggtcagctac gaggagctgg tcgacacgtt ctggaagaac gtcgatcccc
     1441 tcgatcccga ggggcagttc tgcgaccagg gcgacatgta ccggccggcc atcttcacgc
     1501 acgacgacaa gcagaaggcg atcgcggaag cctcgaagag cgctttcgct gcatcgggac
     1561 gcttcaagga tccgatcgtg gtcacggtcg agccggcgcg cgagttctgg gtcgccgagg
     1621 attaccatca ggactactac ctcaagaacc cgctgaccta cgcgtattat cgctggggct
     1681 gcggccgcga cgcgcgcctc gaggagctgt ggggcaagcc gggatcatag gggagcatgg
     1741 cgaattgcga attcgtcatc atcactgtaa ctcacccttg acccggccaa cgaaccatcc
     1801 ctcccctcgc ccgtttacct gactgaaccg gaggaggcgc agatgggatt tctcgatcaa
     1861 gtcatcggca gcgttctagg ctctcgtcag gacaggtccg gcggcttcgg cggcagcggc
     1921 cgcggtggca tgtcgccgct gatgatggcg ctcatggcgc tgctcgcgtc gcgcgggctg
     1981 ggccatggcg gcgggctcgg cggcatgctg ggcggcggcc gcgccgacca tgcccccagc
     2041 gccgggcatg cggtcggacc atcggggatc gatacgagcg tgctctatcc gggcggcgga
     2101 ccggtcggcg gcggtgtcgc gggcggcgtc gtcgatccga gcgccggccc gctcggcggc
     2161 tccaccgacg agatgggcgg cggatttggc ggcggcctgg gcggccgcgc caccggcctc
     2221 gacggcattt tgggcggcgg gctcggcagc ctgatcgagc gtttcagccg cagtggtcac
     2281 ggcgacatcc tcggctcctg gatcggcacc ggcgagaacc gccgcatcac cccgggcgaa
     2341 ctgcatcacg tcctcggcga cgacaccatc gatgcgttgg cggaggaaac cgggatgccg
     2401 cgccgcgatc tgctcgcgga actgtcggag accttgccgg acgtcgtcga ccgtctcacg
     2461 ccggaagggc gggttcccga cgacgacgag atggggcgct gggtctaggc gtcctctcca
     2521 tcggcgcagc ggcggctgct tcgccgctca cgcccttgca gtcccacacc tctgatcggt
     2581 tgactgcggc agagtcgcac aggcttggcc gattcacgta ggttgtggat cgcgcgcggc
     2641 cgttgcgctg aactccattc gcccggatcg ccgtgagcct tcagcgatga cgcgctcatc
     2701 gccggcagga cgcgcactca cggctccgcg cgcagcggcg gcgattcctg atcgcgccgc
     2761 gacccggcgc gcattgttcg gatgcggccg ggataacggc tttccctccg caaaggcgga
     2821 gtgacggcac
//
LOCUS       DATAIQ010000077         2101 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_281062, whole genome shotgun sequence.
ACCESSION   DATAIQ010000077 DATAIQ010000000
VERSION     DATAIQ010000077.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2101)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2101)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2101
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_281062"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..436)
                     /locus_tag="VHN20_01330"
     CDS             complement(<1..436)
                     /locus_tag="VHN20_01330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015932017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FkbM family methyltransferase"
                     /protein_id="HEX2724440.1"
                     /translation="MTPLPKGSAAALARSLRIYHGDAARNARMDGLYARFLKPGDLAF
                     DVGAHVGDRISSFRRLGARVVALEPQPGPARVLRLIHGRDVDVVLLQAAAGDREGEVT
                     LRINSANPTVSTVSAAFVQAAEGAGGWEGQVWDRTIAVPCVTL"
     gene            complement(440..>2101)
                     /gene="mdoH"
                     /locus_tag="VHN20_01335"
     CDS             complement(440..>2101)
                     /gene="mdoH"
                     /locus_tag="VHN20_01335"
                     /EC_number="2.4.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019403951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucans biosynthesis glucosyltransferase MdoH"
                     /protein_id="HEX2724441.1"
                     /translation="MALVGAMAAVVGAGGWTLVDVVLLVCFLIAAPWTVLGFWNAVIG
                     LWLLHGHADGLAQVAPFSAAAGAGEPIRLRTAVLMTLRNEDPTRAFARLRTVRSSIEQ
                     TGEGAHFAYFILSDTSSPEVAAAEEAAAASWRRDSADPERIIYRRRPVNTGYKAGNVR
                     DFCETWGRDYDLMLPLDADSLMSGDAIVRLVRMMQAHPRLGILQSLVVGMPSRSAFAR
                     VFQFGMRHGMRAYTMGSAWWIGDCGPFWGHNALVRIAPFAEQCHLPILPGGPPLGGHV
                     LSHDQVEATLMRKAGYEVRVLPDEHGSWEENPPTLLEFSRRDLRWCQGNMQYWKLLRL
                     PGLLPMSRFQLAWAILMFLGVPAMTLMIGAVPLKFFDGEDLSPFPVGLAMALYLTFLL
                     MYLSPKLAGLADIVLSEGGVRRYGGMARFLSSAVIEIVFSFLIGAVTTFRITLFMIGL
                     LFGRSVVWSGQARDAHGITWGTAVRDLWPPFLFGCVVCGALAWLSPTLLLWSLPLTLG
                     YLLAFPFAVATAAPGVGDLLSRHSLCAIPEEFEKPPEISAVHASA"
BASE COUNT          374 a          724 c          731 g          272 t
ORIGIN      
        1 cgagggtcac gcacgggacg gctatcgtgc ggtcccagac ctgcccctcc cagccgccgg
       61 cgccttcggc cgcctggacg aacgcggccg aaacggtcga gaccgtcggg ttggcgctgt
      121 tgatgcgcag cgtgacttcg ccttcgcggt cgccggccgc cgcctgcaga aggacgacat
      181 cgacgtcgcg cccgtggatc aggcggagca cccgcgccgg gccgggctgc ggctcgagcg
      241 cgacgacgcg ggcgccgagc cggcggaacg aggagatgcg gtcccccaca tgcgcgccga
      301 cgtcgaaagc gagatcaccc ggcttgagga accgcgcata caggccatcc atgcgcgcat
      361 tgcgggcggc atcgccgtgg tagatgcgca gggaccgggc gagcgccgcc gcagaacctt
      421 tgggcagcgg cgtcatggct caggcgctcg catgcacggc gctgatctcg ggcggcttct
      481 cgaattcttc cgggatcgcg caaagggaat gcctgctcaa caggtcgccg acgcccggcg
      541 cggcagtcgc cactgcaaac gggaaggcga gcaggtagcc gagggtgagc ggcaggctcc
      601 agagaagcag cgtcggcgac agccaggcga gcgcgccgca cacgacgcat ccgaacagga
      661 atggcggcca gaggtctctg acggcggtgc cccacgtgat gccgtgcgca tcacgcgcct
      721 ggccgctcca cacgaccgac ctgccgaaca gtaggccgat catgaacagc gtgatgcgga
      781 acgtggtgac ggcgccgatc aggaaggaaa acacgatctc gatgacggcg ctcgacagaa
      841 accgcgccat gccgccgtaa cgccgcacgc cgccttcgct caacacgata tcggccagcc
      901 cggcgagctt cggcgacaga tacatcagga ggaacgtaag atagagggcc atggcgagcc
      961 cgaccggaaa gggcgaaagg tcctcgccgt cgaaaaactt caggggtacc gccccgatca
     1021 tcagcgtcat ggccggcacg ccgaggaaca tcaggatcgc ccaggcgagc tggaaccggc
     1081 tcatcggcaa gaggccgggc aggcgcagga gcttccagta ttgcatgttg ccctggcacc
     1141 agcgcaggtc gcggcgcgag aattcgagca gcgttggcgg gttctcctcc cagctgccgt
     1201 gctcgtccgg gagcacgcgc acctcgtagc ccgccttgcg catcaatgtc gcttcgacct
     1261 ggtcgtgcga cagcacgtgg cccccgagcg gcgggccgcc cggaaggatc ggcaggtggc
     1321 attgctcggc gaagggggcg atgcgcacga gcgcgttgtg cccccagaac gggccgcaat
     1381 cgccgatcca ccaggccgag cccatggtgt aggcgcgcat gccgtggcgc atgccgaact
     1441 ggaagacgcg cgcgaaggcg ctgcgcgacg gcatgcccac gacgaggctt tgcaggatgc
     1501 cgagacgcgg gtgcgcctgc atcatgcgca ccaggcgcac gatggcgtct cccgacatca
     1561 ggctgtcggc gtcgagcggc agcatgaggt cgtagtcgcg gccccacgtc tcgcagaagt
     1621 cccgcacgtt tccggccttg tagccggtgt tgaccggacg gcggcggtag atgatgcgct
     1681 cggggtcggc gctgtcgcgc cgccatgaag ctgccgcggc ctcttccgcc gccgcgacct
     1741 ccgggctgga cgtgtcgctc aggataaaat acgcgaaatg cgccccttca ccggtctgct
     1801 caatgctcga cctgacggtc ctgagccgcg cgaacgcccg cgtcgggtcc tcgttgcgca
     1861 acgtcatcag caccgcggtc ctgagccgga tcggctcgcc ggcgccggcc gctgcgctga
     1921 acggggcgac ctgcgcgagc ccatcggcgt gcccgtgcag cagccacagc ccgatcacgg
     1981 cgttccagaa cccgagcacc gtccagggcg cggcgatcag gaagcagacg agcaggacga
     2041 catccacgag cgtccagccg ccggccccga ccacggccgc catcgcgccg acgagggcca
     2101 t
//
LOCUS       DATAIQ010000078         5355 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_372955, whole genome shotgun sequence.
ACCESSION   DATAIQ010000078 DATAIQ010000000
VERSION     DATAIQ010000078.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 5355)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5355)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5355
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_372955"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..722
                     /locus_tag="VHN20_01340"
     CDS             <1..722
                     /locus_tag="VHN20_01340"
                     /inference="COORDINATES: protein motif:HMM:NF017050.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="GMC oxidoreductase"
                     /protein_id="HEX2724442.1"
                     /translation="PLAGSFQREMRFDRMALSMVRAYLFGTGPGTVVPGGLHAFVKTR
                     PELAVPDIEFMFRGAPPHAALWFPGLKAPYLDGYGIRPTLLHPNSRGEILLRSSDPRA
                     PVRIIGNFLSAPGDLPTLREGFKRARETAYQKPLDPFRGKEVTPGPDVKTDADIDAFI
                     RRTAITAHHPAGTCAMGLGPDAVLDSQLRVRGIERLRVVDASAMPDMVSAHINACVIM
                     MAEKAADMIRGAPPLPAITDA"
     gene            complement(789..2117)
                     /locus_tag="VHN20_01345"
     CDS             complement(789..2117)
                     /locus_tag="VHN20_01345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007761608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX2724443.1"
                     /translation="MNNKNQEDMMDLPPIELPAIDRNHDVRNFTFNEFSTAKLLDHAA
                     QQARQRRYQDFLIVDVDSHHYESESYKEVFQYIESPVIRRAALEGLNRGGRSSMMNSQ
                     VGYQDIGGRITRHWLRKQEKTPAETHRDITMTKRWMDAMGVDYACLFPTPMLFLGLHP
                     QVEIEAALSQAYNRWLCERILAEEPRLISMLYLPFNDPEAAYRMVKEFGGRKGVKGFM
                     VTSPRYKPVHDNAFMKTYALLEEMGLPIAFHAAYNWSDQALATTNRFISVHALGFMWF
                     NMVHMTNWVVNGLPERFPKLKVLWIESGLTWAYCLMQRLDHSYMMRTSECPALKRKPS
                     EYMREMFYSTQPMEMPADKSILEATFKMINAETQLVWSSDYPHWDFDLPSVIYDLPFL
                     NETAKRNILGGNAARLFELDPKPVKKLPSDVPAPPEGFASEVLAGATQGA"
     gene            complement(2256..2654)
                     /locus_tag="VHN20_01350"
     CDS             complement(2256..2654)
                     /locus_tag="VHN20_01350"
                     /inference="COORDINATES: protein motif:HMM:NF012575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HEX2724444.1"
                     /translation="MHDGADAARGKGKREFFVAKASELADGDRRIVTITGGEIGVFCK
                     GGAFYAYSNYCVHSGGPACEGIMINRVQDVIGSDRTYQGQVFTDDVHFVCPWHGYEYD
                     LKTGECIGDRRLKLKKFEVVQRGDDVFVIA"
     gene            complement(2654..3685)
                     /locus_tag="VHN20_01355"
     CDS             complement(2654..3685)
                     /locus_tag="VHN20_01355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724445.1"
                     /translation="MSRWWKWSGLAAVALMLAPAAAKADNVADFYKGKTINIIVGFGP
                     GGGYDAYARLLARYFGKHIPGHPSIVVQNMTGGGSVRAANHVYAVAPKDGTVIAAVNQ
                     NMPMYQLLGGEGARFDSAKIQWLGSMAYSNGTLYTWHDTNMRTLDDAKTRSIPLGGTG
                     TTSDSHIFPNVINTLLGTKFDVVNGYPDGNAIDLALERGEVKGRGGNSWASVTANKKQ
                     WVDEKKINILVQIGFKPEPDLPNVPLLVDLVKDPDEKQIVAVISLPTVIGFAHWVAPE
                     VPKERVATLRAAYAETLKDPDFLAEAKKMGQLIRPQSGEEIGTLVQKAASTSKPVLER
                     TAKLLGWGK"
     gene            complement(3812..4603)
                     /locus_tag="VHN20_01360"
     CDS             complement(3812..4603)
                     /locus_tag="VHN20_01360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009453028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein subunit M"
                     /protein_id="HEX2724446.1"
                     /translation="MHNFTYHRPSDLEAAAALLREAEEAKLLAGGMTLLPTMKQRLTA
                     PSDLIDLSGIAALKGVKVDKNEVVIGAMTCHADVAASPDVAKAIPALASLARGIGDPA
                     VRHCGTIGGSVANADPAADYPAGVLALDAVVETTKRRIGADDFFTGLFETALEPGEII
                     TAVRFRIPDRGRYLKFAHPASGYAVVGVFVAQFGAKIRVAVTGAGPNAFRVPEMEQAL
                     ARNFSAEAIASIKVPADQLMGDIHCSAEYRAHVISVLAQRAVMAL"
     gene            complement(4609..5082)
                     /locus_tag="VHN20_01365"
     CDS             complement(4609..5082)
                     /locus_tag="VHN20_01365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018261277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEX2724447.1"
                     /translation="MNVSLKVNGEERTATVEARTLLVQLLRDHLGLTGTHVGCDTTQC
                     GCCVVHVDRRAIKSCTMLAAQANGKAVTTIEGLAAPDGTLHPMQEAFRDNHGLQCGFC
                     TPGMVMMGVDIARRLPDADEKTVREQLHGNLCRCTGYQGIVEAIMAGSAALNGGR"
     gene            complement(5122..>5355)
                     /locus_tag="VHN20_01370"
     CDS             complement(5122..>5355)
                     /locus_tag="VHN20_01370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724448.1"
                     /translation="RAEHLPHVKALFNAIPCKTNELGVKGAGEAGACGAPGALVSAVV
                     DALRPLGIRHIDMPLSPERVWRAIAEAKSGAGA"
BASE COUNT          841 a         1811 c         1715 g          988 t
ORIGIN      
        1 ggccgctcgc gggctccttc cagcgcgaga tgcgcttcga ccgcatggcc ctgagcatgg
       61 tgcgcgccta tctgttcggc accggccccg gcaccgtcgt gccgggcggc ctgcatgcct
      121 tcgtcaagac tcgccccgag cttgccgtgc cggacatcga gttcatgttc cgcggggcgc
      181 cgccgcacgc cgccttgtgg ttcccgggtt tgaaggcgcc ctatctcgac ggctacggca
      241 tccgcccgac gctgctgcat cccaacagcc gcggcgagat cctgctgcgc tcatccgatc
      301 cgcgggcgcc ggtgcgcatc atcggcaact tcctgtccgc tccgggcgat ctcccgacgc
      361 tgcgcgaagg tttcaagcgc gcgagagaga cggcctacca gaagccgctc gatcccttcc
      421 gcggcaagga ggtgacaccc ggcccggacg tcaagacgga cgccgacatc gatgccttca
      481 tcaggaggac ggcgatcacc gcgcaccatc ccgccggcac ctgcgccatg ggccttggcc
      541 ccgacgccgt gctcgattcg cagctgcgcg tgcgcgggat cgagcgcctg cgcgtcgtcg
      601 acgcctcggc gatgcccgac atggtatcgg cgcacatcaa cgcttgcgtc atcatgatgg
      661 ccgaaaaagc cgccgacatg atccgcggcg cgccgccgct gccggccatc acggacgcct
      721 gaccacacac tttccactgc cattccgggc tcggcccttc gggccgccaa tgacgcaggg
      781 agtgagcgtc atgccccctg cgttgcgccc gcgagcacct cggacgcgaa tccctcgggc
      841 ggcgccggca cgtcgctcgg cagcttcttg accggcttgg gatcgagctc gaacaggcgc
      901 gcggcgttgc cgccgagaat gttgcgcttg gcggtctcgt tgaggaacgg caggtcgtag
      961 atgacgctcg gcaggtcgaa atcccagtgc gggtagtcgg acgaccacac gagctgcgtt
     1021 tccgcgttga tcatcttgaa cgtcgcctcg aggatcgact tgtccgcggg catctccatg
     1081 ggctgcgtcg aatagaacat ctcgcgcatg tattcactcg gcttgcgctt gagagccgga
     1141 cattcggacg tgcgcatcat gtacgagtgg tcgaggcgct gcatcaggca ataggcccag
     1201 gtgaggccgc tttcgatcca cagcaccttc agcttcggaa agcgctccgg cagcccgttc
     1261 acgacccagt tggtcatgtg caccatgttg aaccacatga agccgagggc atgcacggag
     1321 atgaagcggt tggtcgtcgc cagcgcctgg tcgctccagt tgtaggccgc gtggaaggcg
     1381 atcggcaggc ccatctcctc gagcagcgcg taggtcttca tgaaggcgtt gtcgtggacc
     1441 ggcttgtagc gcggcgaggt gaccatgaag cccttgacgc ccttgcggcc gccgaactcc
     1501 ttgaccatgc gatacgccgc ctccggatcg ttgaacggca ggtagagcat cgagatcagg
     1561 cgcggctcct cggcgaggat gcgctcgcac agccacctgt tataggcctg cgaaagcgcc
     1621 gcctcgatct cgacctgcgg atgcaggccg agaaacagca tcggcgtcgg gaacaggcaa
     1681 gcgtagtcga cgcccatcgc gtccatccag cgcttggtca tcgtgatgtc gcgatgcgtt
     1741 tcggccggcg tcttctcctg cttgcgcagc cagtgccgcg tgatgcgccc gccgatatcc
     1801 tggtagccca cctggctgtt catcatcgac gagcggccgc cgcggttgag gccttccagc
     1861 gcggcgcggc ggattaccgg gctctcgata tactggaaca cctccttgta cgactcgctc
     1921 tcgtaatggt gcgagtcgac gtcgacgatc aggaaatcct ggtagcgacg ctggcgcgcc
     1981 tgctgggcgg cgtggtcgag cagctttgcg gtcgagaact cgttgaacgt gaaattgcgc
     2041 acgtcgtgat tacggtcgat cgccggcaat tcgatcggcg gcaggtccat catatcctcc
     2101 tggttcttgt tattcattca tcattgtcat tgcgagtcga gcgaagcgag gagcccggaa
     2161 cccacgaccg ggtgagacat caaaacatac tgttgcaccc aggcgtgggt cccgggctcg
     2221 cgcctgcggc gcgcgccgga atgacagcgc atccatcacg cgatcacgaa cacatcgtcg
     2281 ccgcgctgca cgacctcgaa cttcttcagc ttgagtcttc tgtcgccgat gcattcgccg
     2341 gtcttgaggt cgtattcgta gccatgccac gggcacacga aatgcacgtc gtcggtgaac
     2401 acctggccct ggtaggtgcg gtccgacccg atcacgtcct gcacgcggtt gatcatgatg
     2461 ccctcgcagg ccgggccgcc gctgtgcacg caataattgc tgtaggcgta gaaggcgccg
     2521 cctttgcaga agacgccgat ctcaccgcct gtgatcgtga cgatgcgccg gtcgccatct
     2581 gcgagctccg aggccttggc gacgaagaac tcgcgcttgc ccttgccgcg cgccgcatcc
     2641 gcaccatcgt gcatcacttt ccccatccca gcagcttcgc cgtacgctca aggaccggct
     2701 tcgaggtcga cgccgccttc tgcaccaacg tcccgatctc ctcgccagat tgcggacgga
     2761 tcagctgtcc catcttcttc gcctcggcga ggaagtccgg atccttcagg gtttcggcgt
     2821 aggcggcgcg cagcgtcgcg acgcgctcct tcggcacctc cggcgcgacc caatgcgcga
     2881 agccgatcac cgtcggcagc gagatgacgg cgacgatctg cttctcgtcc gggtccttca
     2941 cgaggtcaac gagcagcggc acgttcggaa ggtccggctc cggcttgaag ccgatctgca
     3001 cgagaatgtt gatcttcttc tcgtcgaccc attgcttctt gttggcggtc acgctcgccc
     3061 agctgttgcc accgcggccc ttgacctcgc cacgctcgag cgccaggtcg atcgcgttgc
     3121 cgtccgggta gccgttgacg acgtcgaact tggtgccgag cagcgtgttg atgacgttcg
     3181 gaaagatatg cgaatccgac gtggtgccgg tgccgccgag cgggatgctg cgcgtcttcg
     3241 cgtcgtcgag cgtgcgcata ttcgtgtcgt gccacgtgta gagcgtgccg ttcgaatagg
     3301 ccatgctgcc gagccactgg atcttggccg aatcgaaacg cgcgccttcg ccgccgagca
     3361 gctggtacat cggcatgttc tggttgaccg cggcaatcac ggtgccgtcc ttgggcgcca
     3421 cggcatagac gtggttggcg gcgcggacgc tgcccccgcc ggtcatgttc tgcacgacga
     3481 tcgagggatg cccggggatg tgcttgccga aataccgtgc cagcagccgc gcgtaggcgt
     3541 cgtagccgcc gccggggcca aacccgacga tgatgttgat tgtcttgccc ttatagaaat
     3601 cggcgacgtt gtccgccttc gcggccgccg gcgccagcat gagcgccacg gcggccagac
     3661 ctgaccactt ccaccaacga gacatgcgtc tcctccctgt ttcgccccct cgttgctcga
     3721 ggttttggac ttttgtcgtt taggacggac ctcttcggtc cgcaaccaac cttgtctggc
     3781 gcccttcggg ctgagagctc atgaacgcgc ctcaaagcgc catgacggcg cgctgggcga
     3841 gcacgctgat gacgtgcgcg cggtattcgg cgctgcagtg gatgtcgccc atcagctggt
     3901 cggcaggtac tttgatggag gcgatcgcct ccgcagaaaa attcctcgcc agggcctgtt
     3961 ccatctcggg gacgcggaaa gcgttcgggc cggcgcccgt caccgcgact cggatcttcg
     4021 ccccgaactg cgcgacgaag acgccgacga cggcatagcc cgaggccgga tgcgcgaact
     4081 tgaggtagcg gccgcggtcg ggaatgcgga agcgtaccgc cgtgatgatc tcgcccggct
     4141 cgagcgccgt ctcgaacagg ccggtgaaga aatcatcggc cccgatgcgc cgcttcgtcg
     4201 tctcgacgac ggcgtcgagc gccagcacgc ccgccggata gtcggcggcc gggtcggcgt
     4261 tggcgaccga tccgccgatc gtgccgcagt ggcgcaccgc cggatcgccg atgccgcgcg
     4321 ccagcgaggc gagcgccgga atcgctttcg ccacgtccgg cgaggccgcc acgtcggcgt
     4381 ggcacgtcat ggcgccgatc acgacctcgt tcttgtcgac cttgacgccc ttgagcgccg
     4441 cgatgccgga cagatcgatg aggtcgctcg gcgccgtgag gcgctgcttc atggttggca
     4501 gcagcgtcat gccgccggcc agcagctttg cctcctcggc ctcccgcagg agcgcggcgg
     4561 cggcctcgag atcgctcggg cgatgatagg tgaagttgtg catggcgctt acctgccgcc
     4621 gttgagggcg gcgctgcccg ccatgatcgc ctcgacgatg ccctggtagc ccgtgcagcg
     4681 gcacaagttg ccgtgcagct gctcacgcac cgtcttctcg tcggcgtccg gcaggcgcct
     4741 agcgatgtcg acgcccatca tcaccatgcc gggcgtgcag aagccgcatt gcaggccgtg
     4801 attgtcgcgg aacgcttcct gcatcggatg cagggtgccg tcgggcgcgg ccagcccctc
     4861 gatcgtagtg accgccttgc cgttggcctg tgccgccagc atcgtgcacg attttatggc
     4921 gcggcggtcg acgtggacca cgcagcatcc gcattgcgtc gtgtcgcagc cgacatgggt
     4981 cccggtgagg ccgagatggt cccgcaggag ctgcacgagc agcgtgcgcg cctcaacggt
     5041 cgcggtgcgc tcctcgccgt tgaccttcaa actgacgttg atgtgcaatt cttcaccctt
     5101 gcctgaatgg atcgccgcgc ctcacgcgcc ggcgcccgac ttcgcctcgg cgatggcccg
     5161 ccatacccgc tcgggcgaga gcggcatgtc gatatgccgg atcccgagcg gcctcagcgc
     5221 atcgacgacg gccgacacca gcgccccggg cgcgccgcag gcgcccgcct cccctgcccc
     5281 tttgacgccg agctcgttgg tcttgcacgg gatcgcgttg aacagcgcct tgacgtgcgg
     5341 caggtgctcg gcccg
//
LOCUS       DATAIQ010000079         8275 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_372975, whole genome shotgun sequence.
ACCESSION   DATAIQ010000079 DATAIQ010000000
VERSION     DATAIQ010000079.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 8275)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8275)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8275
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_372975"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1272
                     /locus_tag="VHN20_01375"
     CDS             <1..1272
                     /locus_tag="VHN20_01375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015822704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegQ family serine endoprotease"
                     /protein_id="HEX2724449.1"
                     /translation="VHRAAPAVVNVYGARVERRQQHMDDFFRRFFGEGGSGMPRERMQ
                     RSLGSGVIVDPSGLVVTNHHVIENMTEVKVSLSDRREFEAEIVLRDPRTDLAVLKLKG
                     ASNLAALEIGDSETLQVGDIVLAIGNPFGVGQTVTQGIVSALARTQVGITDYQFFIQT
                     DAAINPGNSGGALIDIHGRLIGINTAIYSRSGGSQGIGFAVPSSMAKAVAESAKAGSR
                     TVRRPWLGARLQSVDRDLAESIGLERPAGVLVSAVYEKGPAFEAGLRRNDVILEVDGQ
                     NVDDPDAFGYRFALKGLAGQTNLTVLRGGKRTMLQVKLQSPPETRPREPVKIRGRSPL
                     GGATAMNMSPAVADELQLDAATDGVVIADIEEGSVAGRVGFQKGDLILAINGERVNTS
                     KDLERIVRGNSQAWRITINRGGQVITSVLGG"
     gene            1313..2638
                     /locus_tag="VHN20_01380"
     CDS             1313..2638
                     /locus_tag="VHN20_01380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012605462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replication-associated recombination protein A"
                     /protein_id="HEX2724450.1"
                     /translation="MSDLFTSAGLDRDAPRPLADRLRPQKLSEVVGQDHLVGSDGALT
                     RLLESGLLGSLVFWGPPGTGKTTVARLLAGATRLHFEQISAIFSGVADLKKLFEAARG
                     RRAMGQGTLLFVDEVHRFNRAQLDAFLPVMEDGTITLVGATTENPSFELNAALLSRAR
                     VMIFRALDEDAIQRILLRAEEVLGKALPLDDEARASLVRMADGDGRAALTLAEEVWRS
                     TKPGETFGAEALQEIVQRRAPIYDKSQEGHYNLISALHKTIRGSDPDAALYYLARMLD
                     AGEDPLYIGRRLVRAAVEDIGLADPQALVVANAAKDAYDFLGSPEGELALAQATIYLA
                     TAPKSNAAYVAYKAARRTASEHGSLMPPKTILNAPTRLMRDIGYGSGYAYDHDQPDAF
                     SGQDYWPEALGRQSFYEPTQRGFERELTKRLEWWQKLRGQRHGGAGEEE"
     gene            2681..3064
                     /gene="crcB"
                     /locus_tag="VHN20_01385"
     CDS             2681..3064
                     /gene="crcB"
                     /locus_tag="VHN20_01385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020176054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="HEX2724451.1"
                     /translation="MNGYVLVFLGAGLGGALRHGVNVAAARLVGTDFPWGTLGVNVIG
                     GFAMGVLAGWLALKAGEGWTQGVRLFVATGILGGFTTFSAFSLDTILLWERGQAGLAA
                     AYIIGSVALSIGGLVGGLALVRLAT"
     gene            3110..4276
                     /locus_tag="VHN20_01390"
     CDS             3110..4276
                     /locus_tag="VHN20_01390"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012336009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HEX2724452.1"
                     /translation="MKQRTPRGGTDHRSAAEATGRGPRPAADKPLKREARPHRTPDRP
                     SPKAQAKAATREALATGVQTLVVDADEAGMRIDRFLTARFPQLPFTHVQRIVRKGELR
                     VEGKRAKPNDRLEAGQKVRVPPLKLEAPKPVAHSRAGEDARAFLASITLYEDKDVLVL
                     NKPMGLAVQGGSGTTRHVDGLLEALRDDEGQKPRLVHRLDKDTAGCLVIAKTRLAAAT
                     LAKSFRSRSARKIYWALVAGVPRVRQGRVSTYLAKGEAEDGDARMQVARHGDEGASHA
                     LTYYAVVDQAAQKLAWLSFKPVTGRTHQLRAHAAHIGHPIIGDPKYFNDRDWQLPGGI
                     QNRLHLLARRIVIPHPRTGKPIDVTAPLPPHMQQSFNLLGLDASRYDPIVDAPD"
     gene            4512..4868
                     /locus_tag="VHN20_01395"
     CDS             4512..4868
                     /locus_tag="VHN20_01395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724453.1"
                     /translation="MLRPSVLALVASLMIFGSAAFSQETPKPGMPGTWPEQAGPAAPA
                     DPAMTGGTAVTGGTARTRAPAAARPAPPPAVSRQARPRRSYRSCLRRSKELRALRGAQ
                     RRAFITRCQLGIRRPR"
     gene            4875..5555
                     /locus_tag="VHN20_01400"
     CDS             4875..5555
                     /locus_tag="VHN20_01400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020178196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HEX2724454.1"
                     /translation="MKLVIFDVDGTLVDSQQLIVAAQREAFARHGLEAPTRARSLSVV
                     GLSLPEAFTALVGARGPVEGLAAAYKEAFGRLRADPAYHEPLFNGAAGLLEALAGDPD
                     VVLGIATGKSRRGVAHLVERHGWHRLFATIQTADDAPSKPDPTMLRQALTEVGAVAED
                     AVMIGDSTYDMAMARAAGITPIGVSWGYHPVTALKEAGAEVVVDSYGELEGFLVRLGV
                     MARSQAAS"
     gene            5573..6367
                     /locus_tag="VHN20_01405"
     CDS             5573..6367
                     /locus_tag="VHN20_01405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012336012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0043461 - proton-transporting ATP synthase
                     complex assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP12 family protein"
                     /protein_id="HEX2724455.1"
                     /translation="MGDDSTRDWFPEDGEARNPMKAAQEAMKPVLPRRFYRDARVEAR
                     DGAFVLTLDGRPARTPGRQALALPTPALGEAVAAEWQAQGDEVDPATMPLTRLANSAI
                     DGVAPNMTGVTDDLRKYAGSDLVCYRAGEPERLAAAQAAAWDPILAWAHGALGARFVL
                     SEGVTFVAQPEAALDAIRANLSRVSCPFALAALHVMTTLTGSVLIALAHAVGALSAED
                     AWAAAHVDERFQESMWGEDEEALRRRASRRDEFLAASRLYALAARP"
     gene            complement(6390..6557)
                     /locus_tag="VHN20_01410"
     CDS             complement(6390..6557)
                     /locus_tag="VHN20_01410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724456.1"
                     /translation="MSRTGFLQGHFHSAKVRSEMRALDLHPRRLPIGTMLVSVVACAN
                     AASVVAMLMSL"
     gene            6744..>8275
                     /locus_tag="VHN20_01415"
     CDS             6744..>8275
                     /locus_tag="VHN20_01415"
                     /EC_number="6.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007563612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016874 - ligase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA carboxylase subunit beta"
                     /protein_id="HEX2724457.1"
                     /translation="MKDMLDKLEERRAQARLGGGAQRIEAQHKRGKLTARERIELLLD
                     HGSFEEFDMFVQHRCTDFGMEDVKIPGDGVVTGWGTINGRTVFVFSKDFTVFGGSLSE
                     THAQKITKIQDMALKARAPIIGLFDAGGARIQEGVAALGGYGEVFKRNVVASGVIPQI
                     SVIMGPCAGGDVYSPAMTDFIFMVEGTSYMFVTGPDVVKTVTNEVVTAEELGGARVHT
                     TKSSIADGAYANDVEALLQIRRLMDFLPSNNRDGVPEWPSEDDPNRVDASLDTLVPDN
                     PNKPYDVKELILKVVDEADFFEIQEAFARNIVTGFARIEGRTIGIVAQQPMVLAGVLD
                     ADASRKGARFVRFCDAFSIPIVTLVDVPGFLPGTAQEYGGLIKHGAKLLFAYSQATVP
                     LVTVITRKAFGGAYDVMASKHVGGDVNYAWPTAQIAVMGAKGAVEIIFRQDMGDPDKI
                     AARTKEYEDRFMSPFVAAERGYIDEVIMPHATRRRVARALAMLRHKQVEMPGRKHDNL
                     PL"
BASE COUNT         1315 a         2919 c         2806 g         1235 t
ORIGIN      
        1 gtgcacaggg cagcgccggc ggtcgtcaac gtctacggcg cgcgcgtcga gcgccgtcag
       61 cagcacatgg acgacttctt ccgccgcttc ttcggcgaag gcggctcggg catgccgcgc
      121 gagcgcatgc agcgctcgct cggctcgggc gtgatcgtcg atccctccgg cctcgtcgtc
      181 accaaccacc acgtcatcga gaacatgacg gaggtgaagg tgtcgctgtc ggaccggcgc
      241 gagttcgagg ccgagatcgt gttgcgcgat ccgcgcaccg atctcgcagt cctcaagctg
      301 aagggcgcgt ccaaccttgc cgccctcgag atcggcgact ccgaaaccct tcaggtcggc
      361 gacatcgtgc tcgccatcgg caaccccttc ggagtcgggc agaccgtcac ccagggcatc
      421 gtctccgccc tggcgcgcac ccaggtcggc atcaccgact accagttctt cattcagacc
      481 gacgccgcca tcaacccggg caattccggc ggcgcgctga tcgacatcca cggccgcctg
      541 atcggcatca acaccgccat ctactcgcgg tccgggggca gccaaggcat cggcttcgcc
      601 gttccctcga gcatggcgaa ggccgtcgcg gaatcggcga aagcgggcag ccgcacggtg
      661 cgccggccat ggctcggcgc acggctgcaa agcgtcgatc gcgatctggc ggaaagcatc
      721 ggcctggaac gccccgccgg cgtccttgtc tcggcagtct acgagaaggg accggccttc
      781 gaggctgggc tgaggcggaa cgacgtgatc ctcgaggtcg atggccagaa cgtcgacgat
      841 ccggatgcct tcggctaccg cttcgccctg aaagggcttg ccgggcaaac caacctcacg
      901 gtcctgcgcg gcggcaagcg cacgatgctg caggtcaagc tgcagtctcc gccggagacc
      961 cgtccgcgcg agccggtcaa gatcaggggt cgttccccgc tcggcggcgc caccgccatg
     1021 aacatgtcgc cggccgtcgc cgacgagttg caactcgatg cggccacgga cggcgtcgtg
     1081 atcgccgaca tcgaggaggg cagcgttgcc ggccgcgtcg gcttccagaa gggcgacctg
     1141 atcctggcga tcaacggcga gcgggtgaac acgtccaagg acctggagcg catcgtgcgc
     1201 ggcaacagcc aggcgtggcg catcaccatc aaccggggcg gccaggtcat cacctcggtg
     1261 ctcggcggct gaccttgacc ctctcccgcg gaggggcgag gagaggaggg tcatgtccga
     1321 ccttttcact tcggcgggtc tcgaccggga cgcgccgcgt ccccttgccg accggctgcg
     1381 gccgcaaaag ctgtccgagg tggtcggcca ggaccatctc gtcggctccg acggcgcgct
     1441 gacccgcctc ctcgagtcgg gcttgctcgg ctcgctggtc ttctgggggc cgccgggcac
     1501 cggcaagacg acggtggcgc gcctgctggc gggcgcgacc aggctgcatt tcgagcagat
     1561 ctcggcgatc ttctcaggcg tcgcggacct caagaagctg ttcgaggcgg cgcgcggccg
     1621 gcgcgccatg gggcagggga cgctgctctt cgtcgacgag gtacatcgct tcaaccgcgc
     1681 ccagctcgac gccttcctgc cggtgatgga ggacggcacc atcacgctgg tcggcgcgac
     1741 cactgaaaac ccgtccttcg agctgaacgc cgcgctgctc tcgcgcgccc gcgtcatgat
     1801 cttcagggcg ctcgacgagg acgccatcca gcgaatcctg ttgcgggcgg aagaggtgct
     1861 cggcaaggcg ctgccgctcg acgacgaggc gcgcgcctcc ctggtccgca tggccgacgg
     1921 cgacggacgg gcggcgctca cattggcaga agaggtctgg cgttcgacca agcctggcga
     1981 aaccttcggc gccgaggcgc tccaggagat cgtgcagcgg cgcgcgccga tctacgacaa
     2041 gagccaggag ggccactaca acctgatctc ggcgctgcat aagacgatcc gagggtcgga
     2101 cccggatgcg gcgctgtatt atctcgcgcg catgctcgat gccggcgagg acccgctcta
     2161 catcggccgc cgcctcgtgc gcgccgccgt cgaggacatc ggccttgccg acccgcaggc
     2221 gctggtcgtc gccaacgcgg ccaaggacgc ctatgacttc ctcggctcac ccgagggcga
     2281 gctggcgctg gcgcaggcga cgatctacct cgcgacggcg ccgaaatcga acgccgccta
     2341 cgtcgcctac aaggctgcgc ggcgcaccgc cagcgagcac ggctcgctga tgccgcccaa
     2401 gacgatcctc aacgcgccga cgcgtctgat gcgcgacatc ggctacggct ccggctacgc
     2461 ctacgaccac gaccagccgg atgccttttc ggggcaggat tactggcccg aggcgctcgg
     2521 ccggcaaagc ttttacgagc cgacgcagcg cggcttcgag cgcgagctca caaaacggct
     2581 ggagtggtgg cagaagctgc gcggccaacg ccacggcggc gcgggagagg aggaatgacg
     2641 acgtggtcgc tctgccaaca acgagccaag tgccggtgag atgaacggct acgttctggt
     2701 gttcctcggc gccggcctcg gcggcgccct gcggcatgga gtcaacgtcg cggcggcgcg
     2761 cctcgtcggc acggactttc cgtggggcac cctcggcgtc aacgtcatcg gcggcttcgc
     2821 gatgggcgtg ctcgccggct ggctggccct caaggccggg gaggggtgga cgcaaggcgt
     2881 gcgcctgttc gtcgccaccg gcattctcgg cggcttcacg accttttccg ccttctcgct
     2941 cgacacgatc ctgttgtggg agcgcggcca ggccggcctg gcggccgcct acatcatcgg
     3001 ctcggtcgcc ctctcgatcg gcggccttgt cggcggcctc gcgctggtcc gcctcgccac
     3061 ctgacgccgt tcattgccgg cccgccatgc cggtgttacg agccagccca tgaaacagcg
     3121 caccccgcga ggaggcaccg atcaccgctc cgccgccgag gcgacgggcc gcggcccacg
     3181 ccccgctgcg gacaagcccc ttaagcgcga ggcgcggccg caccggactc cggaccgccc
     3241 gtcgccgaag gcgcaagcca aggccgccac ccgggaggcg ctcgccaccg gcgtccagac
     3301 cctcgtcgtc gatgccgacg aggcggggat gcgcatcgac cgcttcctga cggcacgctt
     3361 tccgcaactc ccgttcacgc atgtccagcg catcgtgcgc aagggcgagt tgcgcgtcga
     3421 gggcaagcgc gccaagccca atgatcgact ggaggcgggc cagaaagtcc gcgtgccgcc
     3481 gctcaagctc gaggcgccga agcccgtagc gcacagccgc gccggcgagg atgcacgcgc
     3541 cttcctcgcc tcgatcacgc tgtacgagga caaggacgtg ctcgtcctca acaagccgat
     3601 gggcctcgcc gtgcagggcg gctcgggcac gacgcgccac gtcgacggcc ttctcgaagc
     3661 gctgcgcgac gatgaggggc agaagccgcg cctcgtccac cgcctcgaca aggatacggc
     3721 ggggtgtctc gtcatcgcca agacccgcct cgccgcggcg acgctggcca agtccttccg
     3781 gtcgcgctcg gcgcgcaaga tctactgggc gctcgtggcc ggcgtgccgc gcgtcaggca
     3841 gggccgggtc tcgacctacc tggccaaggg cgaggccgag gacggtgacg cgcgcatgca
     3901 ggtcgcgcgt cacggcgatg aaggcgccag ccatgccctg acctattatg cggtcgtcga
     3961 tcaggccgcc cagaagctag cctggctctc gttcaagccg gtgacgggtc gcacgcacca
     4021 gttgcgcgcc cacgccgcgc atatcggcca tccgatcatc ggcgacccga aatatttcaa
     4081 cgacagggac tggcaactgc ccgggggcat ccagaaccgg ctgcacctgc tcgccaggcg
     4141 catcgtcatc ccgcacccgc gcaccggcaa gccgatcgac gtgacggcgc cgctgccccc
     4201 gcacatgcag cagagcttca acctgctcgg gctcgatgca agccgttacg acccgatcgt
     4261 cgacgccccc gactagggca tcttcgatca aattgtatcg atcacgctca tcctttgtac
     4321 cgtgtctcgg caaatccggg cccatgagag ggacagaaac cagctcgcgt cagcagctta
     4381 gccataatat tgccggccct gggcgccaca ctggagccgc cggttgcaag ggggctcgca
     4441 cggttgtgaa tgcaacggac ccttcgcttg ggcgattgta ggtaggattt cacttgagag
     4501 accacgaacc aatgctccgc ccgtccgtcc tggccctcgt ggcatccttg atgatcttcg
     4561 gatcggcagc cttctcgcag gagacgccga agccggggat gccagggacc tggcccgagc
     4621 aggccggccc ggccgccccc gccgatccgg cgatgacggg cggcacggcc gtgacgggcg
     4681 gcaccgcccg gacgcgagcg ccggctgccg cgcggccggc gcccccgccg gccgtgtccc
     4741 ggcaggcgcg cccgcggcgg agctacaggt cgtgcctgcg gcgctccaag gagctgcgcg
     4801 ctctgcgcgg ggcccagcgc cgggcgttca tcacgcgttg ccagctcggc atccgccgcc
     4861 cgcgctgatc cttcgtgaag ctcgtcatct tcgatgtcga cggcaccctc gtcgacagcc
     4921 agcagctgat cgtcgccgcg cagcgcgagg cgttcgcgcg ccacggcctc gaggcgccga
     4981 cccgggcgcg gtccctctcg gtggtcggct tgtcgctgcc tgaagccttc accgcgctgg
     5041 tcggggccag gggcccggtc gagggcctgg ccgccgccta caaggaggcg ttcggccgcc
     5101 tgcgcgccga tccggcctat cacgagccgc tgtttaatgg tgccgccggc ctcctcgagg
     5161 cgctggcagg cgaccccgac gttgtcctcg gcatcgccac cggcaagtcg cgccgcggcg
     5221 tcgctcacct cgtcgaacgc cacggctggc accggttatt cgcgacgatc cagaccgccg
     5281 atgacgcacc gtccaagccc gatccgacga tgctgcgcca ggccctgacg gaggtcggcg
     5341 ccgtggcgga ggacgccgtc atgatcggcg attccaccta cgacatggcc atggcgcggg
     5401 ccgccgggat cacgccgatc ggcgtgtcgt ggggctatca cccggtgacg gcacttaagg
     5461 aagccggcgc cgaggtcgtc gtcgactcct atggcgagct ggaaggcttc ctggtgcgac
     5521 tcggcgtcat ggcccgctcg caggccgcat cataagcgac catctctcgg ccatgggcga
     5581 cgattccacc cgcgactggt tccccgaaga cggcgaggcg cgcaatccaa tgaaggcggc
     5641 gcaggaggcg atgaagccgg ttctgccgcg gcgcttctat cgcgacgccc gcgtcgaggc
     5701 gcgcgacggc gctttcgtgc tcacgctcga tggccgcccc gcgcggacgc ccggccggca
     5761 ggcgctggcg ctgcccaccc cggcgctcgg cgaggccgtg gccgccgaat ggcaggcgca
     5821 aggggacgag gtcgacccgg ccacgatgcc gctcacccgc ctcgccaact cggcgatcga
     5881 cggcgtcgcg ccgaacatga ccggggtgac ggacgacctc cgcaaatatg ccgggtccga
     5941 tctcgtctgt taccgcgccg gggagccgga acgccttgcg gcggcgcagg cggccgcctg
     6001 ggatccgatc ctcgcctggg ctcacggcgc gctgggtgcc cgttttgtcc tgagcgaggg
     6061 cgtcacgttc gtcgcccagc cggaggcggc gctcgacgcc atccgggcga acctgtcccg
     6121 ggtgagctgt ccctttgccc tggccgcgct gcacgtcatg acgacgctga ccggatcggt
     6181 cctgatcgcg ttggcgcacg ccgtcggcgc gctgtcggcg gaggacgcct gggcggccgc
     6241 ccacgtcgac gaacggtttc aggaaagcat gtggggggag gacgaggagg ccctcaggcg
     6301 ccgcgcctcg cgccgggacg agttcctggc ggcgtcgcgt ctctacgcgc ttgcggcccg
     6361 gccctgagca ggccccgtga aggggccgtt cagaggctca tcagcatggc gacgacggac
     6421 gccgcgttgg cgcaggcgac gacgctgacc agcatcgtcc cgatcggcag gcgccggggg
     6481 tgaaggtcca acgcccgcat ctcggaccgg accttggctg aatggaagtg accctggaga
     6541 aaaccggtgc gtgacatggc ctggtctcct ggctgtcgac tcgtccctcg tgaccgatga
     6601 gcatggatcg catgtttcgg gacgggcgaa tgtgcggcag ctcacatgac ggggggaaaa
     6661 cgctccggcc cggccggaac tccggattcc cgtgacggca ccgccgtgct aggcgtccct
     6721 gacgaggctc acggggcgct ttcatgaagg acatgctcga caagctggag gagcgccgcg
     6781 cgcaggcccg tctcggcggc ggcgcgcagc gcatcgaggc gcagcacaag cgcggcaagc
     6841 tcaccgcgcg cgagcgcatc gagctcctgc tcgatcacgg ctcgttcgag gaattcgaca
     6901 tgttcgtgca gcaccgctgc acggatttcg gcatggaaga cgtcaagatc ccgggcgacg
     6961 gcgtcgtcac cggctggggc acgatcaacg gccgcaccgt gttcgtgttc tccaaggact
     7021 tcaccgtctt cggcggctcg ctctccgaga cccacgccca gaagatcacc aagatccagg
     7081 acatggcgct caaggcgcgg gcgccgatca tcgggctgtt cgatgccggc ggcgcccgca
     7141 tccaggaagg cgtcgcggcg ctcggcggct atggcgaggt gttcaagcgc aacgtggtgg
     7201 catcgggggt gatcccgcag atctcggtga tcatgggccc gtgcgccggc ggcgacgtct
     7261 attcgccggc gatgaccgac ttcatcttca tggtcgaggg cacgagctac atgttcgtga
     7321 ccggccccga cgtggtgaag accgtcacca acgaggtggt gaccgcggag gagctcggcg
     7381 gcgcccgggt gcacacgacc aagtcgtcga tcgccgacgg cgcctacgcc aacgacgtcg
     7441 aggcgctgct gcagatccgc cggctgatgg atttcctgcc gtccaacaat cgcgacggcg
     7501 tgcccgaatg gccgagcgag gatgatccca accgcgtcga cgcctcgctc gacacgctcg
     7561 tccccgacaa ccccaacaag ccgtacgacg tcaaggagct gatcctgaaa gtcgtcgacg
     7621 aagccgactt cttcgagatc caggaagcgt tcgcgcgcaa catcgtcacc ggcttcgccc
     7681 gcatcgaagg ccgcaccatc ggcatcgtgg cgcagcagcc gatggtgctc gcgggcgtgc
     7741 tcgacgcgga cgcgtcacgc aagggcgcac gcttcgtgcg cttctgcgac gcgttcagca
     7801 ttccgatcgt gaccttggtc gacgtgccgg gtttcctgcc agggaccgcg caggaatacg
     7861 gcggcctgat caagcacggg gccaagctgc tcttcgccta ttcgcaggcc acggtgccgc
     7921 tggtcacggt gatcacgcgc aaggcgttcg gcggggctta cgacgtgatg gcgtcgaagc
     7981 atgtcggcgg cgacgtcaac tatgcctggc cgaccgccca gatcgccgtc atgggcgcca
     8041 agggcgccgt cgagatcatc ttccgccagg acatgggaga ccccgacaag atcgccgccc
     8101 gcaccaagga atacgaagac cgcttcatgt cgcccttcgt cgccgccgag cgcggctaca
     8161 tcgacgaggt gatcatgccg cacgcaacgc gccggcgcgt cgcgcgcgcg ctcgcgatgt
     8221 tgcgccataa gcaggtcgag atgccgggcc gcaagcacga taatctgccg ctgta
//
LOCUS       DATAIQ010000080         5674 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_47970, whole genome shotgun sequence.
ACCESSION   DATAIQ010000080 DATAIQ010000000
VERSION     DATAIQ010000080.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 5674)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5674)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5674
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_47970"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..164)
                     /locus_tag="VHN20_01420"
     CDS             complement(<1..164)
                     /locus_tag="VHN20_01420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018388183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinic acid mononucleotide
                     adenylyltransferase"
                     /protein_id="HEX2724458.1"
                     /translation="MRIGLYGGSFHPAHAGHRHVTLLALKRLRLDRVWWIVTPGNPLK
                     DRSGLPPACQR"
     gene            complement(374..1615)
                     /locus_tag="VHN20_01425"
     CDS             complement(374..1615)
                     /locus_tag="VHN20_01425"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012454862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004350 - glutamate-5-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HEX2724459.1"
                     /translation="MAEIGRRARAAARQVGLASTADKKAALRAMEAEVRKSKQAILAA
                     SAYDLSEATAKGQTSAFLDRLKLDEKRLDAIAAAIKDTAALPDPIGRVLATFARPNGL
                     RIERVATPLGVIGVIFESRPNVTSDAGALCVMAGNAVILRAGSESFRSASAIAAAMRQ
                     GLKNVGFPEDAIQLVPTRDRAAVGAMLTGLDGNIDVIVPRGGKSLVARVQAEARVPVF
                     AHLEGVCHVYVHGAADLDMAKSVVLNAKMRRTGICGSAETLLVDRACADTHLKPLVEM
                     LLDAGCAVRGDAAVQATDMRVTAATEDDWYAEYLDAIIAARVVDDLPAAIAHIETYGS
                     HHTDAIVTDDAEAAERFLGEVDSAIVLHNASTQFADGGEFGFGAEIGIATGRMHARGP
                     VGIEQLTSFKYRVRGNGQTRP"
     gene            1857..2543
                     /locus_tag="VHN20_01430"
     CDS             1857..2543
                     /locus_tag="VHN20_01430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009027385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HEX2724460.1"
                     /translation="MKPKNFLSFYVTRFATAELNNPFYRLPTEAAVECWRDATPAGFV
                     FSWKASRYITHMLKLRNAANGLDVMFSRVRLLAPKVGPILFQLPPMLKADRERLASFL
                     AQLPAGYRYTFEFRHASWYEPPILDLLREHDVSLCLSDHAAAPSPWEATASFVYIRGH
                     GPSGRYWGSYSDETLQRWAADIARWRREGRAVYCYFDNDIKSAAPEDARRLIAMTGPA
                     TALQDAASAA"
     gene            complement(2519..3664)
                     /gene="proB"
                     /locus_tag="VHN20_01435"
     CDS             complement(2519..3664)
                     /gene="proB"
                     /locus_tag="VHN20_01435"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004349 - glutamate 5-kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HEX2724461.1"
                     /translation="MIPTLNQFRRIVLKVGSSLLVDRSRGQINHAWLAALAEDIAELH
                     GRGADVLVVSSGAIALGRTVLKLPPGALKLEESQAAAAVGQIALARIWSEVLLGHGIT
                     AGQILVTLADTEERRRYLNARATTQKLLEMRAVPVVNENDTTATTEIRYGDNDRLAAR
                     VATMIGADLLLLFSDIDGLYTAPPASAPDARHLPVVERITPAIEAMGGGAASELSRGG
                     MQTKLEAGKIATAGGTHMVIADGRPANPVRRIAQGARCTWFLTASNPVTARKTWIAGA
                     LEPKGTLYVDAGAVKALHGGASLLPVGVRRFEGAFARGDAVVIRDLAGAELGRGLVTY
                     DAEEAAQIIGRSSREIEAILGYPGRAEMVHRDDLTMAHGAYAAEAAS"
     gene            complement(3723..4760)
                     /gene="obgE"
                     /locus_tag="VHN20_01440"
     CDS             complement(3723..4760)
                     /gene="obgE"
                     /locus_tag="VHN20_01440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012172661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HEX2724462.1"
                     /translation="MKFLDQAKIYIRSGDGGAGAVSFRREKFIEFGGPDGGDGGRGGD
                     VWAEAVEGLNTLIDYRYQQHFKAQKGMHGMGRNRTGVGGADVVLKVPVGTQILAEDGD
                     TLIADLTEPGQRVLLARGGNGGFGNLHFTTSTNRAPRRANPGQEGAERWIWLRLKLIA
                     DAGLVGLPNAGKSTFLATVSAAKPKIADYPFTTLHPGLGVASVDGREFVLADIPGLIE
                     GAHEGAGLGDRFLGHVERCRVLLHLVDGTGEHAGKDYEVIRHELEAYGHDLSEKPEVV
                     ALSKADALDEDTLNEQTARLERAAGKKPLVLSSASGQGVQEALRALLAEVDAARPPPV
                     QEQTETLEWRP"
BASE COUNT          823 a         2010 c         2022 g          819 t
ORIGIN      
        1 cgctggcagg ccggcggcag cccgctgcgg tccttcagcg gattgcccgg ggtgacgatc
       61 caccagaccc ggtcgagccg caggcgcttg agcgccagca gggtgacatg ccggtgcccg
      121 gcatgggcgg ggtggaacga gccgccgtaa aggccgatgc gcatgccagg cgcatgcaga
      181 ggcaggcggg gaagaacttc ctctccgccg ttgaggacgg gggcagagct gccagcacca
      241 catgcgttgg cgtgcgtatc cgcctctcca acgctccccg accgcgagtc ggatgtttcc
      301 gagttgcgca tcaaagagcc catctcggcc aggcccgaga ggggtggcaa ggagagcact
      361 ggctcggccg ccgtcaaggt cgcgtctgtc cgttgccgcg gacccgatat ttgaacgagg
      421 tcagttgctc gattccgacg ggcccgcggg catgcatgcg gcccgtggcg atgccgatct
      481 cggcgccgaa gccgaactcg ccgccgtcgg cgaattgcgt cgaggcgttg tgcagcacga
      541 tcgcggaatc gacctcgccc aggaaccgct cggcggcctc ggcatcatcc gtcacgatgg
      601 catcggtatg gtgcgagccg taggtctcga tgtgggcgat ggccgcgggc agatcatcga
      661 ccacgcgggc agcgataatg gcatcgagat actcggcgta ccagtcgtcc tcggtcgccg
      721 ccgtgacgcg catatccgtg gcctgcacgg cggcgtcgcc gcgtaccgcg cagccggcat
      781 cgagcagcat ctccacaagc ggcttgagat gcgtgtcggc gcaggcgcga tcgaccagca
      841 gcgtctcggc ggacccgcag atgccggtgc gccgcatctt ggcgttgagc accacgctct
      901 tggccatgtc gagatcggcg gccccgtgca catagacgtg gcacacgcct tcaagatgcg
      961 cgaaaacggg cacgcgcgct tccgcctgca cccgggcgac gaggctcttg ccgccacgcg
     1021 gcacgatcac gtcgatattg ccgtcgagcc ccgtcagcat ggcgccgacg gcagcgcggt
     1081 cgcgtgtcgg tacgagctgg atcgcgtcct ccggaaagcc gacattcttc aggccctgcc
     1141 gcatggcggc cgcgatggcg ctggccgacc ggaagctttc cgagccggcg cgcaggatca
     1201 cggcgttgcc cgccatgacg cagagcgcgc cggcatcgga ggtgacgttg gggcggctct
     1261 cgaaaatcac gccgatcacg ccgagcgggg tcgccacgcg ctcgatgcgc agcccgttcg
     1321 ggcgcgcaaa agtcgcgagc acgcgcccga tcggatcagg cagggcggcc gtgtccttga
     1381 tggcggctgc gatcgcgtcg agccgtttct cgtcaagctt caggcggtcg aggaacgccg
     1441 acgtctggcc cttggcggtg gcctccgaga gatcgtaggc gctcgcggcg aggatcgcct
     1501 gcttcgactt gcggacctcg gcctccatgg cgcgcaaggc cgccttcttg tcggccgtgc
     1561 tggcgagccc gacctgacgg gcggcggcgc gagcccggcg gccgatctcg gccatggtcg
     1621 cggcgaccgt ctcgtcgggt gcgaccgaat cggccgccgc cgcgttgaat cggtcggcaa
     1681 tcttcgtcac gttcgatgta gcgtccatgg cagcgtccga cagcggctct cctgcaaagt
     1741 ccaggtcctt agcacggcga agccgggcag gcgaaggctc aaacctgccc ccggcgcgga
     1801 tcggcacctc gggctggcat tacgcctcgt ggcgcggccc tttctacccg gaaacggtga
     1861 agccgaagaa tttcctatca ttctatgtga cccgcttcgc gacggcggag ctcaacaacc
     1921 cgttctaccg ccttcccacc gaggccgcgg tcgagtgctg gcgcgacgcc acgccggcgg
     1981 gcttcgtgtt cagctggaag gcgtcgcgct acatcacgca catgctcaag ctcaggaacg
     2041 ccgccaacgg gctcgacgtg atgttcagcc gcgtccggct gctcgccccg aaggtcggac
     2101 cgatcctgtt ccagctgccg ccgatgctga aggcggaccg tgagcgcctg gcaagcttcc
     2161 ttgcgcagct gcccgccggc taccgctaca cgttcgagtt ccggcacgcg agctggtacg
     2221 agccgccgat cctggatctg ctgcgcgagc acgacgtgtc gctgtgcctg tcagaccacg
     2281 ccgccgcccc gtcgccatgg gaggcaacgg cgagcttcgt ctatatccgc ggccacggcc
     2341 cgagcgggcg ctactggggc agctacagcg acgagaccct gcagcgctgg gcagccgaca
     2401 tcgcgcgctg gcgccgcgaa ggccgggccg tctattgcta cttcgacaac gacatcaaga
     2461 gcgcggcgcc cgaagatgcc cggcgtctga tcgcgatgac cgggccggcc acggcgcttc
     2521 aggacgccgc ttccgccgca taggcgccgt gcgccatggt gaggtcgtcg cgatggacca
     2581 tctcggcgcg gccgggatag ccgaggatcg cctcgatctc gcggctcgag cggccgatga
     2641 tctgggcagc ctcctcggcg tcgtaggtga caaggccgcg ccccagctcc gctccggcga
     2701 ggtcgcggat gacgacggcg tcgccgcgcg cgaacgcgcc ttcgaaacgg cgcacgccga
     2761 ccggcagcag gctggcgccg ccatgcaacg ccttcacggc gccggcatcg acatagagcg
     2821 tgcctttcgg ctcgagcgct ccggcgatcc aggtcttgcg cgccgtcacc gggttggatg
     2881 cggtgaggaa ccaggtgcag cgggcgccct gcgcgatgcg ccgcacggga ttggcgggcc
     2941 gcccgtcggc gatcaccatg tgggtgccgc cggcagtggc gatctttccg gcttcgagct
     3001 tggtctgcat gccgccgcgc gacagctcgg acgcggcgcc cccgcccatg gcctcgatcg
     3061 ccggcgtgat gcgctcgacg acgggaaggt gacgggcgtc cggcgcgctc gccggcggcg
     3121 ccgtgtacag accgtcgatg tcggagaaca agagcagaag gtcggcgccg atcatcgtcg
     3181 cgacgcgggc cgcgaggcgg tcgttgtcgc cgtagcggat ctcggtcgtc gccgtcgtgt
     3241 cgttctcgtt gaccaccggc acggcacgca tctcgagaag cttttgcgtc gtggcgcggg
     3301 cattgaggta gcgccgacgc tcctccgtgt cggcgagcgt gacgaggatc tggccggccg
     3361 tgatgccgtg cccgagcagg acctcggacc agatgcgcgc cagggcgatc tggccgaccg
     3421 cggcggcggc ctggctctcc tcgagtttca aagcgccggg cggcagcttg agcacggtgc
     3481 ggccgagcgc gatcgcgccg gacgacacga ccagcacgtc ggccccgcgc ccgtgcagct
     3541 cggcgatgtc ctcggcgagc gccgcgagcc aggcatgatt gatctggcca cggctgcggt
     3601 cgacgagcag cgacgagccg accttgagca cgatgcggcg gaactggttg agagtgggga
     3661 tcacggcagg gctgggctga tacggtttgt cggaagtcgt cgcccttgta cagcgcaatg
     3721 ccttaagggc gccactccag agtctcggtt tgctcctgca ccggcggcgg tctggcggcg
     3781 tcgacctccg caaggagcgc ccggagcgcc tcctggacgc cctgccccga cgccgacgag
     3841 agcacgagag gcttcttgcc ggcggcgcgc tcgagccgcg cggtctgctc gttgagcgtg
     3901 tcctcatcga gcgcgtcggc tttcgacaac gccaccacct cgggcttctc gctgagatcg
     3961 tggccgtagg cctcgagctc gtggcggatc acctcgtaat ccttgccggc atgctcgccg
     4021 gtgccgtcga cgagatgcag gagcacgcgg cagcgctcga catggccgag gaagcggtcg
     4081 ccgagcccgg cgccttcgtg ggcgccctca atgaggccgg gaatgtcggc gagcacgaac
     4141 tcgcggccgt cgacgctggc gacgccgagc ccgggatgca gggtcgtgaa cggataatcg
     4201 gcgatcttcg gcttcgccgc cgagaccgtc gccaggaacg tcgacttgcc ggcattcggc
     4261 aggccgacga ggccggcatc ggcgatcagc ttgaggcgca gccagatcca gcgctcggcg
     4321 ccctcctgcc ccggattggc gcggcgcggc gcgcggttcg tcgaggtggt gaaatgcagg
     4381 ttgccgaagc cgccgttgcc accgcgcgcg agcagcacgc gctggccggg ctcggtcaga
     4441 tcggcgatca gcgtgtcgcc gtcctcggcg aggatctggg tgccgaccgg caccttcagg
     4501 acaacgtcgg cgccgcccac gccggtgcgg ttgcggccca tgccatgcat gcccttctgc
     4561 gccttgaagt gctgctggta gcggtagtcg atcagcgtgt tgaggccttc gaccgcctcc
     4621 gcccagacgt cgccgccgcg gccgccgtcg ccgccatcgg gcccgccgaa ctcgatgaat
     4681 ttttcgcgcc ggaacgagac ggcgccggcg ccgccgtcgc cggaccggat gtagattttc
     4741 gcctggtcga gaaacttcat gcgtcgcctc ttaagcagag gtggggtgca ggagcaacgt
     4801 gcccgccggc tgcgtgagcg caaaggcgca atgccgcagg ccggaacaaa tcgcggcctc
     4861 atttattgtc gagtttgcct tccctccctc ccaacatcag ctcggaacat gatcagacgg
     4921 ctactccttg cgggcaccgc ccttcccctt ctcgcgctcg tgccggccaa ctcctcgttc
     4981 gccgccggcc agccggcccc ggccccgctc atcgtcgcgc aggcgacgcc gggcgaagcg
     5041 ccaggccggg cgcgccccga gggaggcgcc tcgggcagcg ctaccggcga ggagcccccc
     5101 cgccgcgggc agggtgccgg tgcgggcgag cggccgcgcg gtgccccagg cgccggcgag
     5161 cagccgccgc gcggtcgcgc ccagcaagag gccccggcat ctccgcgcgg cgccgagccc
     5221 gcggccaggc cgggtgcgtc ggaaacggcg ccagggcggg cggggggttc cgcagctccc
     5281 gacaggtcgc cggcgcggcc tgccgtgcaa gctccgtccg ctccgccgac ggcgggtgcg
     5341 ggcgaggaac cgcgccagcg gccaggcggg gccgagcggc ccgatcgcgc cgagcgcccg
     5401 gaccgggcac gcggccagga gagcgccccc ggaacaccgc cgggaggcgc gcccgggcgc
     5461 gccggcgccc ctgccagcca gccgccggcc gccacggcgc agccgccggc cgcgcccgcg
     5521 aaccgtcagg gcgaatccga gcggccgcgg ccgcgcacgc aggagaccgc tcccgcaacg
     5581 ccgccagcgg gcgcgccggg gcgcgcggcg acgcctgcgc cggcgacgca gcctccggcc
     5641 tcgacgacga tgcaacctgg cgccgccccg gccg
//
LOCUS       DATAIQ010000081         1599 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_186524, whole genome shotgun sequence.
ACCESSION   DATAIQ010000081 DATAIQ010000000
VERSION     DATAIQ010000081.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1599)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1599)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1599
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_186524"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..331
                     /locus_tag="VHN20_01445"
     CDS             <1..331
                     /locus_tag="VHN20_01445"
                     /inference="COORDINATES: protein motif:HMM:NF012345.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HEX2724463.1"
                     /translation="QRSEEGDVDCLGIIPGSVRKLAPAEGLAVPHMGWSRLEVAAENI
                     GLTTGNYVYFAHSYAAEDGPATVARAEHGRPIPAIVRSGNWTGTQFHPERSGPAGARF
                     LEAWLAA"
     gene            328..1044
                     /locus_tag="VHN20_01450"
     CDS             328..1044
                     /locus_tag="VHN20_01450"
                     /inference="COORDINATES: protein motif:HMM:NF013168.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HisA/HisF-related TIM barrel protein"
                     /protein_id="HEX2724464.1"
                     /translation="MIIYPAMDLMNGQIVRLRQGRFDAVTYYHSVPAEALNSFDDCGA
                     TWAHVVDLDGAREGKPVQHQLLATLARHSPIKLQVAGGVRSEEHVATLLEAGAARVVI
                     GSLAVRDPEATRALLERFGPDRITLSLDVNVVEGTPMVATHGWQQDSGQSLWEVAAIY
                     PEARHLLLTDIGRDGMLDGPNHALLKEAVTRLPHLAIQASGGVASVDDLVQLTTDGAI
                     LGRAMWEGKLDLAEALSARG"
     gene            1031..>1599
                     /locus_tag="VHN20_01455"
     CDS             1031..>1599
                     /locus_tag="VHN20_01455"
                     /inference="COORDINATES: protein motif:HMM:NF013168.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HisA/HisF-related TIM barrel protein"
                     /protein_id="HEX2724465.1"
                     /translation="MPAARIIPCLDVADGRVVKGVQFRDHRDVGDIVEYALRYSAEGA
                     DELVFYEIKASAEGRSLDLGWVRRIADVIDIPFCVAGGIRDRETAAAVLEAGADKVSL
                     NSPALERPELITELANDFGAQCVVVGIDSLRGEDGRYRVKQYTGSPDATRDAGRETAA
                     WAREATDRGAGEIVLNAMAQDGVRRGYDLP"
BASE COUNT          262 a          559 c          527 g          251 t
ORIGIN      
        1 ccagcggagc gaggaaggcg acgtggattg cctcggaatc attcccggtt cggttcgaaa
       61 gcttgcaccc gccgagggcc tagccgtccc gcacatgggc tggagccggc ttgaggtcgc
      121 agctgaaaac atcggtctaa ccaccggcaa ttacgtctat ttcgcgcaca gctatgccgc
      181 ggaggatggt cccgccacgg ttgcacgggc cgagcacggg cggcctatcc ccgccatcgt
      241 tcgcagcggc aattggaccg gtacacagtt ccacccggaa cgttccggac ccgctggtgc
      301 acgcttcctg gaggcctggc tcgccgcatg atcatctatc ccgccatgga cctcatgaac
      361 ggccagatcg tccggctgcg gcagggccgg tttgacgccg tcacttacta ccactcggtc
      421 cccgccgaag cgctcaacag cttcgacgat tgcggggcca cctgggcgca tgtcgtcgac
      481 ctggatggcg cgagggaggg caagcccgtc cagcaccagc tgctcgccac cctcgcccgc
      541 cattcgccaa tcaagctgca ggtcgccggc ggtgtccgct ccgaagagca tgtcgccacc
      601 ttgctcgaag ccggcgcggc ccgggttgtg atcggcagtc tcgccgtgcg cgatccggag
      661 gccacacgcg ctctgttgga gcgcttcgga cccgatcgga tcaccctctc gctcgacgtc
      721 aacgtggtcg aaggcacgcc catggtcgcc acccacggtt ggcagcagga cagcggccag
      781 agcctgtggg aggtcgccgc catctacccg gaggcgcgcc acctgctgct caccgacatc
      841 ggtcgtgacg gcatgctcga cggtcccaac cacgccctgc tgaaggaagc ggtcacgcgc
      901 ctgccccacc tcgcgatcca ggctagcggc ggcgtggcgt cggtcgatga cctggtccag
      961 ctgaccaccg acggcgcgat cctcggccgc gccatgtggg agggaaagct cgacctcgcg
     1021 gaggcgctga gtgcccgcgg ctaggatcat cccctgcctc gacgtggccg acgggcgggt
     1081 cgtcaaaggc gtgcaattcc gcgaccaccg ggacgtcggc gacatcgtgg agtatgcact
     1141 gcgctactcg gccgagggcg cggacgagct ggtcttctac gagatcaagg cgagcgctga
     1201 aggccgcagc ctcgaccttg gctgggtcag gcgcatcgct gacgtcatcg acattccctt
     1261 ctgcgtcgcc ggcggcatcc gcgaccggga gaccgccgcc gccgtgctgg aggcgggcgc
     1321 ggacaaggtg tcgctcaact cgcccgcact ggaacggccc gagcttatca ccgagctggc
     1381 caacgacttc ggcgcgcaat gcgtggtggt cggcattgac agccttcgcg gcgaggacgg
     1441 ccgctatcgg gtcaagcaat ataccggctc gcccgacgcc acccgtgatg cgggacgcga
     1501 gacggccgct tgggcccgcg aagccaccga tcgcggcgcc ggcgaaatcg tgctcaacgc
     1561 catggcgcag gatggcgttc gccgcggcta cgatcttcc
//
LOCUS       DATAIQ010000082         2054 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_47984, whole genome shotgun sequence.
ACCESSION   DATAIQ010000082 DATAIQ010000000
VERSION     DATAIQ010000082.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2054
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_47984"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(4..951)
                     /locus_tag="VHN20_01460"
     CDS             complement(4..951)
                     /locus_tag="VHN20_01460"
                     /EC_number="3.4.23.49"
                     /inference="COORDINATES: protein motif:HMM:NF013446.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0004175 - endopeptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="omptin family outer membrane protease"
                     /protein_id="HEX2724466.1"
                     /translation="MSAPLAICAAASSAQAADPISERHAVWQIADQVSAELFGGYLTG
                     MSRELVYNVPGDGSKLSQLNWQIDHAFVLGGALGYRPWNWLELRARGWAHVSSDNAMD
                     DFDWLFGFNGFDSWSDLSHHDDTRLAKAFQVDVSAAARVFKSGPLSVSALGGYRFLTM
                     KWNAYGGRFVYSTDDFRDDIGTFPDRELQIAYQQWWHAPYLGLGLTYRSGPLTVATEL
                     IGTPLVRGRDQDHHVEIALFKENFSPSRMAGMSVSAELAMNRHLSLVGRVEAERFYEA
                     KGSTTVFGFDPPGIEFFPKPSAGADHQSLLVSLGAKGRF"
     gene            1204..>2054
                     /locus_tag="VHN20_01465"
     CDS             1204..>2054
                     /locus_tag="VHN20_01465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018043036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX2724467.1"
                     /translation="MLRPFAIFILLIAGVTHAPAWAQDAADIVVRMNRLENQVRQMSG
                     EIEQLQFENRQLKEQVRKFQEDVEFRFQDQRGAPRAQAPVPTPAPTPASPPRPQRRSE
                     AVEPGEMPAPPGTAARPQRRGDAFDPGEMPNAPGTPRQLGTTAPSAPLTIGGIIDNND
                     ETDPGGPLDLNRVRGGGGAPRSGVSAPAQPPAAPSVAATGSGDARSDFDGAYAYILQK
                     QYERAEMGFRQFLQSHPRDRLVPEATYWLGESYYQRNRHREAAEQFLKVSTEYTSSQR
                     APDAMLRL"
BASE COUNT          379 a          707 c          665 g          303 t
ORIGIN      
        1 gcatcaaaag cgtcccttcg cgcccagcga gacgagcagc gattgatggt cggcgcccgc
       61 cgatggcttg ggaaagaact cgatgccagg tggatcgaag ccgaacaccg tggtgctccc
      121 cttggcctca tagaaccgct cggcctcgac gcggccaacg agcgacagat gccggttcat
      181 ggccaactcg gcagataccg acatgccggc catgcggctt gggctgaagt tttccttgaa
      241 gagcgcgatc tcgacgtggt ggtcctggtc gcgcccccgc accagcggcg ttccgatcaa
      301 ttcggtcgcg acggtcagag gccccgagcg gtaggtgagg ccgagcccga ggtaaggggc
      361 gtgccaccat tgttgatagg cgatctgcaa ctcacggtcc gggaacgtgc cgatgtcatc
      421 gcggaaatca tccgtcgagt agacgaagcg gccgccatac gcgttccatt tcatggtcag
      481 aaagcgatag ccgccgagcg cgctcacgga cagggggccg ctcttgaaca cacgcgcggc
      541 ggcgctgaca tcgacctgga aggcctttgc caagcgcgtg tcgtcgtggt gggacaggtc
      601 cgaccagctg tcgaatccgt tgaacccgaa tagccagtcg aaatcgtcca tggcgttgtc
      661 cgacgacacg tgcgcccagc cgcgggcccg caactccagc cagttccatg gccgatagcc
      721 gagcgcgccg ccgagcacga aagcatggtc gatctgccaa ttgagctggc tgagcttcga
      781 gccgtcgccg gggacgttgt agacgagctc tcgcgacatg cccgtcaggt agccgccgaa
      841 cagctcggcg ctgacctggt ccgcgatctg ccagaccgcg tgccgttcgg agattgggtc
      901 ggctgcctgg gccgacgacg cagcagcaca gatcgcaagc ggggccgaca ccgttgcacc
      961 gaggacccat cgcaatcgga acggtgtttt gcgcacccag ggagctccgc agcggcctcg
     1021 cgacacgagc gacagaccgc gaacgccggc tcgacaataa tcagcgccgc ttcggttgcc
     1081 tatcgggccc gcctgggccg tccataccct gtgacggaaa gaccacaacg gggcgcgcca
     1141 ccttttcgcc atcgcccggc tcatgataga gcaacggctc cgccgacaac cgaatcttcg
     1201 ccaatgctgc gcccgtttgc tattttcatc ctgctgattg ccggcgtgac ccacgcgccc
     1261 gcctgggccc aagacgcggc cgacatcgtc gtgcgcatga accggctcga aaaccaggtc
     1321 cggcagatgt cgggggagat cgagcaactg cagttcgaga accggcagct caaggaacag
     1381 gtgcgcaagt tccaggaaga cgtggaattc cgcttccagg accagcgggg ggcgccgcgt
     1441 gcgcaggcgc ccgtcccaac ccccgctccg acgccagcct cgccgccgcg gccacagcgc
     1501 cgcagcgagg cggttgagcc cggggagatg cctgcccccc ctggcacggc ggcccggccg
     1561 cagcggcgcg gcgatgcctt cgatccaggc gagatgccga atgcgccggg cacgcctcgc
     1621 cagctcggga cgacggctcc gtcggcgccg ctcaccatcg gcggcatcat cgacaacaac
     1681 gacgagaccg accccggcgg cccgctcgac ctcaatcggg tcagaggcgg cgggggagcg
     1741 ccgcgcagcg gggtctcagc gccggcacag ccgcctgcgg cgcccagcgt cgccgccacc
     1801 ggcagcggcg atgcccgcag cgatttcgat ggcgcctacg cctacatcct gcagaagcaa
     1861 tacgagcggg ccgagatggg ctttcgccag ttcctgcagt cgcatccgcg tgaccggctg
     1921 gtgcccgagg ccacctattg gctcggcgag agctattacc agcgcaaccg ccatcgcgag
     1981 gcggccgagc agttcctgaa agtgtccacc gaatatacca gctcgcaaag ggctcctgac
     2041 gccatgctgc gcct
//
LOCUS       DATAIQ010000083         1692 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_419555, whole genome shotgun sequence.
ACCESSION   DATAIQ010000083 DATAIQ010000000
VERSION     DATAIQ010000083.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1692)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1692)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1692
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_419555"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1408
                     /gene="serA"
                     /locus_tag="VHN20_01470"
     CDS             <1..1408
                     /gene="serA"
                     /locus_tag="VHN20_01470"
                     /EC_number="1.1.1.95"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007614731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004617 - phosphoglycerate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HEX2724468.1"
                     /translation="ILEDAKNLKVIGRAGIGVDNVDIPAATGRGVIVMNTPFGNSITT
                     AEHAIALMFALARQIPQADASTQSGKWEKNRFMGVELTGKTLGIIGCGNIGSIVAERA
                     LGLRMRVMAYDPFLSWERALDLGVEKVDLEDLLRRADIITLHTPLTDKTKNILSADNL
                     AKTKKGVRIINCARGGLVDEAALRAALDSGHVAGAAFDVFVEEPATTNPLFGQPNVVC
                     TPHLGAATSEAQENVALQIAEQMSDYLLKGAISNAVNFPSITAEEAPKLKPFIALAER
                     LGSFAGQLTETGLKAVRITYEGEVAHMKVKALTSAAVAGLLRPMLADINVVSAPAVAK
                     ERGVVIEETTREAEGDYDSLITISVVTDRQERSVAGTVFADGKPRVVKIKGISVDAEF
                     APSMIYVSNEDKPGFIGRFATTLGDAGVNIATFALGRDAPGGSAVALVEVDGKVPAEV
                     ISRIQTIPGVKQAKPLMF"
     gene            1442..>1692
                     /locus_tag="VHN20_01475"
     CDS             1442..>1692
                     /locus_tag="VHN20_01475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017487381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1902 domain-containing protein"
                     /protein_id="HEX2724469.1"
                     /translation="MIGAEEPEPFRMRRYAVVRVAWDDEAKVWFVQETDIQGLVTEAA
                     TLEELRRKVPMIVRDLLEDEHDRPEEIEIDFIAYAHDRVR"
BASE COUNT          300 a          567 c          570 g          255 t
ORIGIN      
        1 gatcctggag gatgccaaga acctcaaggt gatcggccgc gcgggcatcg gcgtcgacaa
       61 cgtcgatatc ccggcagcca ccggcagggg cgtgatcgtg atgaacacgc cgttcggcaa
      121 ctccatcacc acggcggagc acgccatcgc gctgatgttc gcgctggccc gccagatccc
      181 gcaggccgac gcgtcgacgc agagcggcaa gtgggagaag aaccgcttca tgggcgtcga
      241 gctcaccggc aagacgctcg gcatcatcgg ctgcggcaat atcgggtcga tcgtcgccga
      301 gcgcgccctc ggcctgcgca tgcgcgtcat ggcctacgac ccgttcctgt cgtgggagcg
      361 cgccctcgac ctcggcgtcg agaaggtcga cctcgaggac ctgctgcgcc gcgccgacat
      421 catcaccctg cacacgccgt tgaccgacaa gaccaagaac atcctgtcgg ccgacaacct
      481 cgccaagacc aagaagggcg tgcgcatcat caactgcgcg cgcggcggcc tcgtcgacga
      541 ggcggcgctg cgggcggcgc tcgattccgg ccacgtcgcg ggcgcggcct tcgacgtgtt
      601 cgtcgaggag ccggcgacga ccaacccgct attcggccag cccaacgtgg tctgcacgcc
      661 gcatctcggc gccgccacca gcgaggccca ggagaatgtc gccctgcaga tcgccgagca
      721 gatgtcggac tacctgctca agggcgccat ctccaacgcg gtcaacttcc cgtcgatcac
      781 ggccgaggag gcgccgaagc tgaagccgtt catcgcgctg gccgaacggc tcggctcctt
      841 tgccgggcag ctcaccgaga ccggcctcaa ggcggtgcgc atcacctacg agggcgaggt
      901 ggcgcacatg aaggtgaagg cgctgaccag cgccgccgtg gccgggctgc tcaggccgat
      961 gctggccgac atcaacgtcg tctccgcccc ggcggtcgcc aaggagcgcg gcgtcgtcat
     1021 cgaggagacg acgcgggaag ccgagggcga ttacgactcg ctgatcacca tcagcgtcgt
     1081 caccgaccgc caggagcgct cggtggccgg cacggtgttc gccgacggca agccgcgcgt
     1141 cgtcaagatc aagggcatct cggtggacgc cgagttcgcg ccgtcgatga tctacgtgtc
     1201 gaacgaggac aagccgggct tcatcggccg gttcgcgacg acgctcggcg acgccggcgt
     1261 caacatcgcg accttcgcgc tcggccgcga cgcccccggc ggctcggccg tggcgctcgt
     1321 cgaggtcgac gggaaagtgc cggccgaggt gatctcgcgc atccagacga tcccgggcgt
     1381 caagcaggcc aagccgctca tgttctgacg catggagttg cgccagaacc gatcgtgatc
     1441 gatgatcggc gctgaggaac cggagccctt tcgaatgcgc cgttatgctg tcgttcgtgt
     1501 ggcctgggat gacgaggcta aggtttggtt cgttcaagag acggacattc agggcctcgt
     1561 caccgaagct gcgaccttgg aggagttgcg ccgcaaggtg ccgatgatcg tgcgggacct
     1621 gttggaggac gagcacgacc ggcccgagga gatcgagatc gacttcattg cctatgccca
     1681 cgaccgggtt cg
//
LOCUS       DATAIQ010000084         1743 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_96693, whole genome shotgun sequence.
ACCESSION   DATAIQ010000084 DATAIQ010000000
VERSION     DATAIQ010000084.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1743)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1743)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1743
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_96693"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            158..1702
                     /locus_tag="VHN20_01480"
     CDS             158..1702
                     /locus_tag="VHN20_01480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007699121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SpoVR family protein"
                     /protein_id="HEX2724470.1"
                     /translation="MSATAKERLYKGADWDFATLQRIHDACEEVALSELGLEVYPNQI
                     EVITAEQMLDAYASIGMPLFYKHWSFGKHFAQHEALYRKGMRGLAYEIVINSSPCISY
                     VMEENTATMQTLVIAHAAFGHNHFFRNNYLFKQWTDADGILDYLAFAKAYVSSCEERY
                     GQSAVERTLDAAHALMSHGVHRHPQRKKLDLRQEEIRERERRAHEESIFNDLWRTVPT
                     GPGKNRANLTLERRQALLQLPQENILYFLEKSAPRLRPWQRELLRIVRLVAQYFYPQG
                     QTKVMNEGTATYVHYRIMTRLREEGRMTDGDFLEFLQSHTNVVFQPTFDDPRFSGFNP
                     YALGFAMMQDIERIVTAPDDEDREWFPDIAGAGDAMGVLRDIWANYRDESFIGQFLSP
                     RLMRQLRMFHLQDDPDEPGIRVDSIHNERGYRSIRRALSRQHDIGWIDANIEVVDADL
                     AGDRRLVLQHTTLGGNVLAEADARRILQHLADLWGYDVVLKEVSGDAVLKEHAASPRA
                     GLLPDG"
BASE COUNT          310 a          618 c          546 g          269 t
ORIGIN      
        1 atggtccggg ccgcgagacg acgctgtgga gcacctatga gcggatgtgc gccgaaggcg
       61 cgcccctggt catgcggcgg gtgagccgcc ggcgcgacat cttcgcggtc ttccgcgacc
      121 tgttccggcc gcgccacgaa ggaaagatgg cagccctatg agcgcgacgg cgaaggaacg
      181 gctgtacaag ggcgcggact gggacttcgc cacgctgcag cggatccacg acgcctgcga
      241 ggaggtggcg ctgtcggagc tcggcctcga ggtctacccg aaccagatcg aggtgatcac
      301 ggcggagcag atgctcgacg cctacgcctc gatcggcatg ccgctgttct acaagcactg
      361 gtcgttcggc aagcatttcg cgcagcacga ggcgctctac cgcaagggca tgcgcggcct
      421 cgcctacgag atcgtcatca acagctcgcc ctgcatctcc tacgtgatgg aagagaacac
      481 ggcgacgatg cagacgctcg tgatcgcgca tgccgcgttc ggccacaatc acttcttccg
      541 caacaactac ctcttcaagc agtggaccga cgccgacggc atcctcgact acctcgcctt
      601 cgccaaggcc tacgtgagct cgtgcgagga gcgctacggt cagtccgccg tggagcgcac
      661 gctcgacgcc gctcacgcct tgatgtcgca cggcgtgcac cggcacccgc aacgcaagaa
      721 gctcgacctt cgccaggagg agatccgcga gcgcgagcgc cgcgcgcacg aggagagcat
      781 cttcaacgac ctgtggcgca cggtgccgac cggccccggc aagaaccgcg ccaacctgac
      841 gctcgagcgt cgccaggcgc tgctgcagct gccgcaggag aacatcctct acttcctcga
      901 gaagtcggcg ccacgcctgc ggccctggca gcgcgagctc ctgcgcatcg tgcgcctcgt
      961 cgcgcaatat ttctacccgc agggccagac caaggtgatg aacgaaggca cggccaccta
     1021 cgtgcattac cgcatcatga cgcgcctgcg cgaggaaggc cgcatgaccg acggcgactt
     1081 cctcgagttc ctgcagtcgc acaccaacgt tgtgttccag ccgaccttcg acgacccgcg
     1141 tttctccggc ttcaacccgt acgcgctcgg cttcgcgatg atgcaggaca tcgagcgcat
     1201 cgtgaccgct ccggacgacg aggaccgcga atggttcccc gacatcgccg gagccggcga
     1261 tgccatgggc gtcctgcgcg acatctgggc gaactaccgc gacgaaagct tcatcggcca
     1321 gttcctgagc ccgcgcctca tgcggcagct gcgcatgttc cacttgcagg acgacccgga
     1381 cgagcccggc attcgcgtcg actcgattca caacgaacgc ggctaccgct cgatccgccg
     1441 cgcgctttcc cgccagcacg acatcggctg gatcgacgcc aatatcgagg tggtcgatgc
     1501 cgacctcgcc ggtgaccgtc gcctcgtcct gcagcacacc acgctcggcg gcaatgtcct
     1561 ggccgaggcg gacgcgcgcc gcatcctgca gcatctcgcc gacctctggg gctacgacgt
     1621 ggtgctgaag gaggtcagcg gcgacgccgt cctcaaggag catgccgcca gcccgcgcgc
     1681 cggccttctg cccgacggct gaacttcagg cgtgtccggc tggaccgcgc cgggcgcgtg
     1741 ctt
//
LOCUS       DATAIQ010000085         4073 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_186650, whole genome shotgun sequence.
ACCESSION   DATAIQ010000085 DATAIQ010000000
VERSION     DATAIQ010000085.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4073)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4073)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4073
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_186650"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..304
                     /locus_tag="VHN20_01485"
     CDS             <1..304
                     /locus_tag="VHN20_01485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724471.1"
                     /translation="LELNVARGDVAFPLLRGGLAAVLGSWRQSEGIVSLTGQQFTLSF
                     RRPRLFLSLDGEVKRVRTPLHFELLPRALTVLAAPTAPALSRSTPAAAEAVSRPSI"
     gene            complement(339..704)
                     /locus_tag="VHN20_01490"
     CDS             complement(339..704)
                     /locus_tag="VHN20_01490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724472.1"
                     /translation="MSDALAPAVAEAAVPGALDAGALEAAGPVPGVTLDPGAGLVPPG
                     SIAGEPDVVECVPVAVGRSVAGAPDCAKAGIAAAVATRQAAICFFSIVISPGMRGSRA
                     RQVKRRLGWFVPGAGLPTL"
     gene            607..1269
                     /locus_tag="VHN20_01495"
     CDS             607..1269
                     /locus_tag="VHN20_01495"
                     /inference="COORDINATES: protein motif:HMM:NF017088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042314 - bacteriochlorophyll binding
                     [Evidence IEA];
                     GO_process: GO:0019684 - photosynthesis, light reaction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PRC-barrel domain-containing protein"
                     /protein_id="HEX2724473.1"
                     /translation="MTPGTGPAASSAPASSAPGTAASATAGASASDTGGSSPSRAATA
                     PASGAPGQHPPQGQFVAQQQQGQWLASKLIGTRVVGANNETIGDVNDVLLDRSGTAQA
                     IVIGVGGFLGIGEKDVAVPFNALEFASAREMATTASTSPGGSGGASSTGGATSTGAGA
                     SSNAARNGDGERIVLRLTKADLQAAPTFHSNRASSTTSGAGNAGNGRPGAASGGSAPS
                     RP"
     gene            1406..1648
                     /locus_tag="VHN20_01500"
     CDS             1406..1648
                     /locus_tag="VHN20_01500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724474.1"
                     /translation="MPLTKDIDPVHSSQDFPHELRRTLSSHQIDEPATTAMVSGVIGE
                     PHDDDPICPSYMLWQNLVMPAYPFRAPALSSTQPPL"
     gene            complement(1846..2040)
                     /locus_tag="VHN20_01505"
     CDS             complement(1846..2040)
                     /locus_tag="VHN20_01505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KGG domain-containing protein"
                     /protein_id="HEX2724475.1"
                     /translation="MAKGNSTSNRGFASMDEERQREIASKGGRSVPAEKRSFSQDREL
                     ASEAGRKGGQASGGTRSAQD"
     gene            complement(2223..3641)
                     /locus_tag="VHN20_01510"
     CDS             complement(2223..3641)
                     /locus_tag="VHN20_01510"
                     /EC_number="2.7.7.13"
                     /EC_number="5.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010684442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004476 - mannose-6-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mannose-1-phosphate
                     guanylyltransferase/mannose-6-phosphate isomerase"
                     /protein_id="HEX2724476.1"
                     /translation="MSSSSAITPVVLCGGTGTRLWPVSREKTPKQFAPLIGSRSTFQL
                     TVERVSSALFRRPCVITNNDARFVVAEQLRETGRDAEIVLEPHRRDSAAAIAAAAVLA
                     ARRDPQAILLALPADHLIDDADAFARACEAALRAVDQGLIMTFGIRPDRPATAFGYIQ
                     AGDAVGDGAGFRVSQFVEKPDAATAARYIDQGYLWNSGCFLFRADVMLREIAQFAPPL
                     LAAIQEAVAAAKTDLDFLRLDADAFGRAPRISIDHAVMEHTTQAGVVPVSFRWSDIGS
                     WGALWDVLQRDENGNAVQGDARLTSVRNSLVFSDDMLTAVAGLEDVVVVSTRDAVLVT
                     SRRSDQDVKALVESLKAEGRNEADEHLRVHRPWGWYQRVDIGHRFQVKRICVQPGGRL
                     SLQRHAHRAEHWVVVTGSAEVTIGDRVVVLHENESAYVPIGCSHRLVNPGRIPLEIIE
                     VQVGSYTGEDDIVRLEDVYNRP"
BASE COUNT          670 a         1377 c         1381 g          645 t
ORIGIN      
        1 gctcgaactg aacgtggcgc gcggcgacgt ggcgttcccg ctgctgcgcg gcgggctcgc
       61 ggcggtgctc ggctcgtggc gccagagcga gggcatcgtc agcctgaccg ggcaacagtt
      121 cacgttgtcc ttccgccggc cgcggctctt cctgtcgctc gacggggaag tcaaacgcgt
      181 gcgcacgccg ctgcatttcg agcttctgcc gcgcgccctc acggtgctgg cggcccccac
      241 cgcgccggcg ctgtcgcgca gcacgcccgc cgccgccgag gcggtctctc gaccatcgat
      301 ctgatctggc agggcgttgc gacgcgggga gggggccgtc aaagggtcgg caagcctgcg
      361 ccaggaacga accatccgag gcggcgtttg acctgacgcg cgcgcgatcc gcgcatgcca
      421 ggagagatga cgatgctgaa gaagcatatg gccgcctgcc tcgttgccac ggcggcggcg
      481 atgcccgcct tcgcgcagtc gggggcgccg gcgaccgacc ggccaactgc caccggcacg
      541 cactcgacca cgtccggctc gcccgcgatg ctgcccggcg gcacgagccc tgcgcccggg
      601 tcgagcgtga ccccggggac gggacccgcg gcctcgagcg cgccggcgtc gagcgcgcca
      661 gggacggccg cttccgccac cgccggcgcg agcgcatccg acaccggcgg gagttcaccc
      721 tcgcgggccg cgaccgctcc ggcctccggc gcgccggggc agcatccacc tcaggggcag
      781 ttcgttgccc agcagcagca aggccaatgg ctcgcttcga agctcatcgg cacgcgcgtc
      841 gtcggcgcca acaacgagac gatcggcgac gtcaatgacg tgctgctcga ccgcagcggc
      901 accgcgcagg cgatcgttat cggcgtcggc ggcttcctcg gcatcggcga gaaggatgtc
      961 gcggtgccgt tcaacgccct tgaattcgcc tccgcgcgcg agatggccac gacggcatcg
     1021 accagccccg gcggctcggg tggcgcatcg tcgaccggcg gcgccacgtc gaccggggcg
     1081 ggcgcttcgt cgaatgcggc gcgcaacggc gacggcgagc gcatcgtgtt gcggttgacg
     1141 aaggccgatc ttcaggccgc tccgaccttc cacagcaatc gcgcatcgtc gaccacgtcc
     1201 ggcgcgggca atgcgggcaa tggccgaccc ggcgcggcct ccggcggctc ggctccgtcg
     1261 cgtccttgac gcgtcggcaa tcgccgccgc gcaccgacga cgtgctgcca cgggtgcgcg
     1321 cccggggtgg atgcgcgcac cttgacgcag gaacctcggc ttgacgcccg gcgttgatcc
     1381 ggcgccctca gatgcggaga cagcaatgcc gttgaccaaa gacatcgatc ccgttcactc
     1441 aagtcaggat tttccgcacg aactgcgccg gaccttgagc tcgcatcaga tcgatgagcc
     1501 tgcgacgacc gcaatggtca gcggcgtcat cggcgagccg catgacgacg atccgatctg
     1561 cccgtcctac atgttgtggc agaatctcgt gatgccggca tatccgttcc gcgcgccggc
     1621 gctgtcatcg acgcagccgc cgctctgatc gcagaggcgg ctctgtgaga gccgcccgcc
     1681 tagccgttcg atcgaaattg cgccgggctc gcatcatcgc gtgcccggcg caattgtgtc
     1741 ggaaacagta cagtcgcccg gcaggaaaac aggaggaggc ggccggcgca taatgtgaca
     1801 aaaaaagggc cgcccgcggc ggccctttta cggagtgaaa gaatatcaat cctgtgcgct
     1861 gcgggtcccg cccgacgcct gtccgccctt gcggccggct tccgatgcga gctcgcgatc
     1921 ctgcgagaat gagcgcttct cggcaggtac gctccttccg cctttgcttg cgatttccct
     1981 ttgccgctct tcgtccatcg aggcgaagcc gcggttcgag gtcgaattcc ctttcgccat
     2041 gaatgcctcc ttcccagttg cttagactcg gacaaccaat gtcggattcg atggttccgg
     2101 gaaccgtgca attttttgag gcaagaagac cgaaatgcac ctaagtagat cgaggaactt
     2161 aatccaagga agccagctgt tcccgccgct gccgatcgaa atcgtagtgc agcgatgccc
     2221 ggtcagggcc ggttatagac atcctcgagc cgcacgatgt cgtcctcgcc cgtgtagctg
     2281 ccgacctgaa cttcgatgat ctcgagcgga atgcgaccgg gattgacgag gcggtggctg
     2341 cagccgatgg gcacgtaggc ggactcgttc tcatgcagga cgacgacgcg gtcgccgatc
     2401 gtcacctcgg ccgagccggt gaccacgacc cagtgctcgg cgcgatgcgc atgccgctgc
     2461 agcgagagcc gaccgccggg ctgcacgcag atgcgcttga cctgaaagcg gtgaccgatg
     2521 tcgacgcgct gataccagcc ccagggacga tgcacccgca ggtgctcgtc ggcctcgttg
     2581 cggccctccg ccttgagaga ttcgacgagg gctttgacgt cctggtcgct ccggcgggac
     2641 gtcacgagga ccgcgtcgcg ggtgctcacg acgacgacgt cctccagtcc ggcaacggct
     2701 gtcagcatgt cgtcgctgaa gaccaggctg ttgcgcacgc tcgtcagtct ggcatcgcct
     2761 tgcacggcat tgccgttctc gtcgcgctgc agcacgtccc agagcgcgcc ccatgaaccg
     2821 atgtccgacc agcggaagct caccggaacg acgccggcct gcgtcgtgtg ctccatcact
     2881 gcatgatcga tcgagatgcg cggggcgcgg ccgaatgcgt cggcatcgag gcgcagaaaa
     2941 tcgagatccg tcttcgctgc cgcgacagcc tcctggatcg cagcaagcag cggcggtgcg
     3001 aattgcgcga tctcgcgcag catcacgtcg gcacggaaca ggaagcagcc gctgttccag
     3061 aggtagccct gatcgatgta gcgcgccgcc gttgcggcgt ccggcttctc gacgaattgg
     3121 ctgacgcgga acccggcgcc gtcgccaacc gcgtcacccg cctggatata tccgaaggcg
     3181 gtcgcggggc ggtcaggcct gatgccgaag gtcatgatca agccttggtc gaccgcccgc
     3241 aatgccgctt cgcatgcgcg cgcgaaggcg tcggcatcat cgatcaggtg atcggccggc
     3301 agggcgagca ggatcgcttg cggatcgcgg cgcgcggcga gcacggcggc agcggcgatc
     3361 gccgcggcgg aatcgcggcg atgcggctcg agaacgatct cggcgtcgcg acccgtctcc
     3421 ctgagctgct cggcgacgac gaatcgcgcg tcgttgttgg tgatcacgca aggccgccgg
     3481 aacagcgccg acgagacgcg ttcgaccgtc agctggaacg tcgagcgcga cccgatcaag
     3541 ggggcgaact gcttgggcgt cttttcgcgg gagacgggcc aaaggcgcgt tcccgttccg
     3601 ccgcacagaa caacgggcgt gatggctgac gagctactca tgcgacaggg ttcgctaaac
     3661 gcgcggccgg gcggcctgct cccagaccct agtcataaaa ggatcgcgag gggaatattt
     3721 gccagcggga aatgacggtc cgtcggtcgc tcatggttac gcgccaggcc ggcgcgacgt
     3781 ccgccggggc gcgctcgcga ggatcaagcg gcggcgcggg cgggccgaag gcaatggccg
     3841 cagcgcgcgg ccgcgcacgt caatatccgc cccggctcgt cccgtagacg cgaaatggcg
     3901 agtggacgcg cgcctcggcg ggcctccgct ccggattccg tgcgggaaaa tgggggtcaa
     3961 acgcctgcac aggaggccgt tccgtcttgg gtcggtcgtg gtcggaaggc cgggtattct
     4021 tcacgctctt ggtatccatg aatgaacctc gagacagtgc cgtcagatcc ggg
//
LOCUS       DATAIQ010000086         1973 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_4596, whole genome shotgun sequence.
ACCESSION   DATAIQ010000086 DATAIQ010000000
VERSION     DATAIQ010000086.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1973)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1973)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1973
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4596"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(24..1382)
                     /locus_tag="VHN20_01515"
     CDS             complement(24..1382)
                     /locus_tag="VHN20_01515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018042058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ActS/PrrB/RegB family redox-sensitive histidine
                     kinase"
                     /protein_id="HEX2724477.1"
                     /translation="MPNLTSRFFRQDARRLRLDTLVRLRWLAVAGQSFAVAIVHFGLG
                     FPLPFGACLLIIAISAALNAMLSIRYPASYRLSADAATLLLGFDILQLAVLLYLTGGL
                     QNPFAMLFLAPVLISATALPPERTLALGFLAIACATLLALVHRPVPWSADAQLQLPFL
                     YVTGIWAAILLSAAFTGVYAWRVAEEARQLAQALAATELVLAREQHLSQLDGLAAAAA
                     HELGTPLATIALVAKELDRQDPKDPAMAEDVKLLREQVDRCRGILGKLTSLGGEQSDI
                     MARMTLGHLLEEVVAPHRAFNVAIEIAGKGEGPEPICGRSPGLLYGLANLIDNAVDFA
                     VTKVVIEAFWTADHVRIEIRDDGPGFAPEVLLRVGEPYVTTRGAGKAETEEGSGLGLG
                     LFIAKTLIERSGAQVTFTNAPPPESGAIVRIIWPRPAFEKETHIDAQALETLTNGQGV
                     PI"
     gene            1608..>1973
                     /locus_tag="VHN20_01520"
     CDS             1608..>1973
                     /locus_tag="VHN20_01520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012605677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyhydroxyalkanoate depolymerase"
                     /protein_id="HEX2724478.1"
                     /translation="MDLAYYWYEAAHLMLSPARAASDATQLLFQNPINPLSHTPYGRT
                     VAATCELFERTTRRYGKPSFGIASTMVAGRLAAVSERVVWERPFGRVISFDRALTADQ
                     QVQPHPKLLMVAPMSGHYAT"
BASE COUNT          328 a          635 c          690 g          320 t
ORIGIN      
        1 tcgaacctgc aacgttactc cagtcatata ggaacgcctt ggccattcgt cagggtctcg
       61 agggcctggg catcaatgtg cgtttccttc tcaaacgcgg ggcggggcca aatgatcctt
      121 acgatggccc cgctttccgg cggcggtgcg ttggtgaagg ttacctgggc ccccgaccgc
      181 tcgatcagcg tcttggcgat gaacagcccg agtcccagcc cggagccttc ctcggtctcg
      241 gccttgccgg cgccgcgggt cgtcacgtag ggctcgccga cccgcagcag cacctcgggg
      301 gcgaagccgg ggccgtcgtc gcggatctcg atgcgcacat ggtccgcggt ccagaaggct
      361 tcgatgacga ccttggtaac ggcgaaatcg acggcgttgt cgatcaggtt cgccagtccg
      421 tagagcaggc ccgggctgcg cccgcagatc ggctccgggc cctcgccctt gccggcgatt
      481 tcgatggcga cattgaacgc ccggtgcggg gcgacgacct cttcgagcag gtggccgagg
      541 gtcatccttg ccatgatgtc ggattgctcg ccgccgaggg atgtgagctt gccgaggatc
      601 ccgcggcagc gatcgacctg ctcgcgcagc agcttgacgt cctcggccat cgccgggtcc
      661 ttggggtcct gccggtcgag ctccttggcg accagcgcga tggtcgccag gggcgtgccg
      721 agctcgtgcg cggccgcggc ggcgaggccg tcgagctgcg acaggtgctg ctcgcgcgcc
      781 agcaccagct cggtcgcggc aagggcttgc gccagctgac gcgcctcctc ggcgacgcgc
      841 caggcgtaga cgcccgtgaa cgcggcgctg agcaggatgg cggcccagat gccggtcaca
      901 tacaggaacg ggagctggag ctgggcgtcg gccgaccagg gcaccgggcg atggacgagc
      961 gccagcaggg tggcgcaggc gatcgccagg aacccgaggg cgagcgtgcg ttccggcggc
     1021 aaggcggtcg ccgagatcag caccggcgcg agaaagagca tcgcaaacgg gttttgcagg
     1081 cccccggtga ggtagagcag cacggcgagc tgcaggatgt cgaaaccgag gagcagggtc
     1141 gccgcgtccg cgctgagccg gtagctggcc gggtagcgga tgctcagcat ggcgttcagg
     1201 gccgccgaga tggcgatgat caggagacag gcgccgaagg gaagggggaa tcccagcccg
     1261 aaatggacga tggcgaccgc gaagctttgc cccgcgaccg ccagccagcg caggcgcacc
     1321 agggtgtcga gccgcagccg ccgtgcatct tgcctgaaga atcgcgaggt caggttcggc
     1381 atggctgctc gatagacgct gaaccccggg acggccaacg gcaagcccaa atccgcccgc
     1441 atgaggcaaa aagggcacac ccttcccggt aacggcgtat taactgtgtg ttaacgcgat
     1501 cttaacctct gggatggtgg aattcccaga gtggaacctt aggttccagc ggcttgttaa
     1561 cggaggcatc ctgtccggtc gagggcagga ccccttgggg gttgtgaatg gacctcgcgt
     1621 attattggta cgaagccgcg catttgatgc tgagcccggc gcgcgccgcc tccgatgcga
     1681 cgcagctgct ttttcaaaat ccgatcaacc ccctttcgca caccccgtat ggccgcaccg
     1741 tcgccgcgac ctgcgagctg ttcgagcgca ccacccgccg ctacggcaag ccctccttcg
     1801 gcatcgcatc gacgatggtg gccggtcggc tcgccgccgt cagcgagcgt gtcgtgtggg
     1861 agcgcccctt cgggcgcgtg atttcgtttg accgggcgct gaccgccgac cagcaggtgc
     1921 agccgcaccc gaagctgttg atggtcgcgc cgatgtcggg ccattacgcg acg
//
LOCUS       DATAIQ010000087         1912 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_373412, whole genome shotgun sequence.
ACCESSION   DATAIQ010000087 DATAIQ010000000
VERSION     DATAIQ010000087.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1912)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1912)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1912
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_373412"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1021)
                     /locus_tag="VHN20_01525"
     CDS             complement(<1..1021)
                     /locus_tag="VHN20_01525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012334762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HEX2724479.1"
                     /translation="MSGRAGTPHDGLRGLVGPRAEKMVSLALQGGGAHGAFTWGVLDA
                     LLEDGRLAIEAITGASAGSMNAVVLTEGWAEGGPDGAREQLRKFWKRVSLDGALSPVQ
                     QRLFNRFLGYWSHDGSPAHLWLDVWTRSLSPYDTNPLEINPLRDALEELIDFDRVRSI
                     DSTKLFISATNVWTGKARIFKGPELTADHILASACLPMIFQAVEIDGEPYWDGGYMGN
                     PALFPLFYETQTDDILLVQINPLERRLTPRTAHEIQNRLTEITFNGNLLRELRVIDFV
                     TRLIDEGKLSKDEYKRVLMHRIDGGETLDAFTASSRLNAEWSFFKQLKDLGRASGKKW
                     LARNFD"
     gene            complement(1018..1803)
                     /locus_tag="VHN20_01530"
     CDS             complement(1018..1803)
                     /locus_tag="VHN20_01530"
                     /EC_number="1.1.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007559002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003858 - 3-hydroxybutyrate dehydrogenase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxybutyrate dehydrogenase"
                     /protein_id="HEX2724480.1"
                     /translation="MTLRSRSAVVTGSTSGIGLGIARALAKEGANVLINGFGDAAEIE
                     KERSGIEAEFGVTALYSPADMSKADEIAGMIRTAEEAFGTVDILVNNAGVQHVAPIEE
                     FPPEKWDQIMAINLSAAFHAIRAAVPGMKARRWGRIISTASAHSLVASPFKAAYVSAK
                     HGIAGLTKTVALELATHGVTVNCISPGYVWTPLVERQIPDTMKARGPTREQVINDVLL
                     AAQPTKEFVTIDQVAALAAFLCSDAASQITGANLSIDAGWTAQ"
BASE COUNT          286 a          632 c          645 g          349 t
ORIGIN      
        1 catcgaaatt tcgcgcaagc cattttttcc cgctggcgcg cccgagatcc ttgagctgct
       61 tgaagaacga ccattcggca ttgagccgcg acgacgccgt gaaggcgtcg agcgtctcgc
      121 ctccgtcgat gcgatgcata agcacgcgct tgtattcgtc ctttgacagc ttgccctcgt
      181 cgatcaggcg cgtgacgaag tcgatgacgc gcagttcgcg cagcaggttg ccgttgaacg
      241 tgatctcggt gagccggttc tggatctcat gggccgtgcg cggcgtcagg cggcgctcga
      301 gcggattgat ctgcacgagc aggatgtcgt ccgtctgcgt ctcgtagaaa agcgggaaca
      361 gggccgggtt gcccatgtag ccgccgtccc agtacggctc gccgtcgatc tccacggcct
      421 ggaagatcat cggcaggcac gcggaggcga ggatgtggtc ggcggtcagc tccggccctt
      481 tgaagatcct ggccttgccg gtccacacat tcgtggccga gatgaacagc ttggtgctgt
      541 cgattgaccg cacgcggtcg aaatcgatga gctcctcgag cgcgtcgcgg agcggattga
      601 tctcgagcgg attggtgtcg tacgggctga gcgagcgcgt ccacacgtcc agccacagat
      661 gcgccggcga gccgtcatgg ctccagtagc cgagaaagcg gttgaacagg cgctgctgca
      721 ccggcgacag ggcgccgtcg aggctgacgc gcttccagaa tttgcgcagc tgctcgcggg
      781 cgccgtccgg cccgccttcg gcccagcctt cggtgagcac gaccgcgttc atcgatccgg
      841 cgctggcgcc ggtgatcgcc tcgatggcga gccgcccgtc ctcgagaagg gcgtcgagca
      901 cgccccaggt gaaggcgcca tgggcgccgc cgccctgcaa ggccagcgac accatcttct
      961 cggccctcgg gccgacgagg ccgcgcagcc cgtcgtgcgg ggtgccggcg cgcccgctca
     1021 ttgcgccgtc cagcctgcgt cgatcgacag gttggcgcct gtgatctggc tggcggcgtc
     1081 ggagcacagg aacgcggcca gcgccgccac ctggtcgatg gtgacgaatt ctttcgtcgg
     1141 ctgcgccgcc agcagcacgt cgttgatgac ctgctcgcgc gtggggccgc gcgccttcat
     1201 ggtgtcggga atctgccttt cgacgagcgg cgtccagacg tagccggggc tgatgcagtt
     1261 gaccgtcacc ccatgggtcg caagctcgag ggccacggtc ttggtgaggc cggcgatgcc
     1321 gtgcttggcc gacacgtagg ccgccttgaa cggcgaggcg accagcgaat gggccgaggc
     1381 ggtcgagatg atgcggcccc agcggcgcgc cttcatgccg ggcacggcgg cgcgaatcgc
     1441 gtggaaggcc gccgacaggt tgatggccat gatctggtcc catttctccg gcgggaattc
     1501 ctcgatcggg gcgacgtgct gaacaccggc attgttgacg aggatgtcga ccgtgccgaa
     1561 cgcctcctcg gccgtcctga tcatcccggc gatctcgtcg gccttgctca tgtcggcggg
     1621 cgagtagagc gccgtcacgc cgaactcggc ttcgatgccg ctgcgctcct tctcgatctc
     1681 ggccgcatcg ccgaacccgt tgatcaggac gttcgcgccc tccttggcga gcgctcgggc
     1741 gatgccgagc ccgatcccgc tggtcgaccc ggtcaccacc gccgatctcg agcgaagcgt
     1801 catcacatcc tcctctttcc agccccatct agagccgcgc ggcgcccgag tcatccgtca
     1861 tggggggatg ggccgcactg cctttccttg ggctcatggc tgcctatctg gt
//
LOCUS       DATAIQ010000088         2735 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_419917, whole genome shotgun sequence.
ACCESSION   DATAIQ010000088 DATAIQ010000000
VERSION     DATAIQ010000088.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2735)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2735)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2735
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_419917"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2735
                     /locus_tag="VHN20_01535"
     CDS             <1..>2735
                     /locus_tag="VHN20_01535"
                     /inference="COORDINATES: protein motif:HMM:NF013736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HEX2724481.1"
                     /translation="NQLVPITRNGRREDVYWTYSYGPIDDEAAPNGIGGVLVVCTETT
                     EQVLAAQRLAAQAERQRRLFARAPGFIAVLRGPEHVFEFVNEAYVRLVNGRHVTGMRA
                     REALPEIAGQGFFELLDQVYATGERFVAEHVPVRLRRLPEGGVQERFLDFIYEPIISE
                     TGQISGIFVEGHDVTEAHHAQEALRANERRQALLVELGDRFRDLDDPADISFAAAELL
                     GQALGVSRAGYGTIDPVAETITIERDWNAPGIRSLAGVLHFRDYGSYIEDLKRGDTVV
                     FADADKDPRTAATADALKAISAQAVVNMPVTEDGGFVALLYLNHATARAWPAEELAFV
                     REVAERTRTAVERRRAEQELRESEEHYRNAAELNPQVPWTATPDGQLDRVAARWRAWT
                     GASGLGASWGEGLHPDDLGYTTEAWVRSVTTGVPYDVEHRVKLLAGEYRWARSRAFPR
                     RDAEGRIVKWYGTTEDIHEQKSAEDELHRLNATLEQQITERTAALQASEARLRAIFET
                     SLQFRGLMALDGTLIDANATSLQAIDASLEDVTGKPFWDTPWFTATRGMPEMVRDAVA
                     QAAAGKTIRQEILINLPSGWRWFDFAMRPMRDERGDIVAIVPEAVETTERHQAEEALR
                     QSQKLEAMGQLTGGVAHDFNNLLTPIIGSLDMLHRRGVGAERERRLIEGALQSAERAK
                     TLVQRLLAFARRQPLQPSAVDVASLVSGMAELIASTTGPQIKVTVEIAEKLPSAMGDP
                     NQLEMAILNLAVNARDAMADGGVLRISATSEIVGPRHRAKLKAGAYVRLSVADTGVGM
                     DRATLARAIEPFFSTKGIGKGTGLGLSMVHGLASQLGGAMLLSSKPGLGTNVELWLPV
                     ASEPAMTLPVTVDTAAETKGAGTALLVDDEEVVRMSTADMLAELGYTVVEARSAE"
BASE COUNT          459 a          949 c          967 g          360 t
ORIGIN      
        1 agaaccagct cgtgccgatc acgcgcaacg gccgccgcga ggacgtctac tggacctaca
       61 gctacggtcc gatcgacgac gaagcggcgc cgaacggcat cggcggcgtc ctcgtcgtct
      121 gcaccgagac caccgagcag gtgctcgccg cgcaacgtct cgccgcccag gcggaacgcc
      181 agcggcggct gttcgcgcgc gctccgggtt tcatcgcggt cctgcgcggg cccgagcacg
      241 tgttcgagtt cgtcaacgag gcctatgtcc ggctcgtcaa cggccgccat gtcaccggca
      301 tgcgcgcccg ggaggccctg cccgagatcg ccggccaggg gttcttcgag cttctcgacc
      361 aggtctacgc gaccggcgag cgcttcgtcg cggagcatgt ccccgtgcgc ctgcggcgcc
      421 tgcccgaggg cggggtgcag gagcgcttcc tcgacttcat ctacgagccg atcatctccg
      481 aaaccggaca gatcagcggc atcttcgtcg aggggcacga cgtcaccgag gcgcatcatg
      541 cgcaggaggc gctgcgcgcg aacgaacgcc gccaggcgct gctggtcgag ctcggcgacc
      601 gcttccgcga tctcgacgac cccgccgaca tctccttcgc cgccgccgag ctgctcggcc
      661 aggccctggg cgtgagccgc gccggctacg gcacgatcga tccggtcgcc gagacgatca
      721 ccatcgagcg ggactggaac gcgccgggca tcaggagcct cgccggcgtc ctgcatttcc
      781 gcgactacgg ctcctatatc gaggacctca agcgcggcga caccgtcgtc ttcgcggatg
      841 cggacaagga cccgcgcacc gcggcgacgg ccgacgccct gaaggcgatc agcgcccagg
      901 ccgtcgtcaa catgcccgtc accgaggacg gcggcttcgt cgccctgctc tacctcaacc
      961 acgcgacggc gcgcgcatgg ccggccgagg agctcgcctt cgtgcgcgag gtcgcggagc
     1021 gcacgcgcac ggcggtcgag cgccgccgcg cggaacagga gctgcgcgaa agcgaagagc
     1081 attaccgcaa cgccgccgag ctgaacccgc aagtgccgtg gaccgcgacg ccggacggcc
     1141 agctggatcg cgtggcggcc cggtggcggg cctggacggg ggcgagcggc ctcggcgcga
     1201 gctggggcga aggcctccac ccggacgacc tcggctacac gacggaggcg tgggtccgct
     1261 cggtaacgac cggcgttccg tacgacgtcg agcaccgggt caagctgctg gcgggcgaat
     1321 accgctgggc gcgctcgcgc gccttcccgc ggcgcgacgc cgaaggccgc atcgtcaaat
     1381 ggtatgggac gacggaggac atccacgagc aaaaaagcgc cgaagacgag ctgcacaggc
     1441 tcaacgccac gctcgagcag cagatcaccg agcgcaccgc cgcccttcag gcgagcgagg
     1501 cgcgcctgcg ggcgatcttc gagaccagcc tgcagtttcg cgggctgatg gcgctcgacg
     1561 gcacgctcat cgacgccaat gcgacatcgc tgcaagcgat cgatgccagc ctggaggacg
     1621 tgacagggaa gccgttctgg gacacgccgt ggttcacggc cacgcgcggc atgccggaga
     1681 tggtgcgcga cgcggtcgct caggccgcgg ccggcaagac catacgccag gaaatcctca
     1741 tcaacctgcc gagcggctgg cgctggttcg acttcgcgat gcgccccatg cgtgacgaac
     1801 gtggcgatat cgtcgccatc gtgcctgaag ccgtggaaac gacggagcgg caccaggccg
     1861 aagaggcgtt gcgtcagtcg cagaagctcg aagcgatggg ccagctcacg ggcggcgtcg
     1921 cgcacgattt caacaacctc ctgacgccga tcatcggcag cctcgacatg ctgcaccggc
     1981 gcggcgtcgg cgccgagcgc gaacggcggc tgatcgaagg cgccctgcaa tcggccgagc
     2041 gcgcgaagac gctcgtgcag cggctgctcg ccttcgcgcg gcgccagccg ctgcagccga
     2101 gcgccgtcga cgtcgccagc ctcgtgagcg gcatggcgga gctgatcgcc agcacgacgg
     2161 ggccgcagat caaggtgacg gtcgagatcg cggagaagct gccgagcgcg atgggcgacc
     2221 cgaaccagct cgagatggcg atcctgaacc tggccgtgaa cgcgcgcgac gccatggcgg
     2281 acggcggcgt gctgcgcatc tcggcgacga gcgaaatcgt cgggccgcgg catcgcgcga
     2341 agctgaaggc gggcgcgtat gtccgcctgt cggtcgccga caccggcgtc ggcatggacc
     2401 gggccacgct ggcgcgcgcg atcgagccgt tcttctcgac caagggcatc ggcaaaggga
     2461 cggggctcgg cctctcgatg gtgcatggcc tcgcttcgca gctcggcggc gccatgctgc
     2521 tgtcgagcaa gcccggcctc ggcaccaatg tggaattgtg gctgcccgtc gcttcggagc
     2581 ccgcaatgac gctgccggtc acggtcgata cggcggcgga aacgaaaggc gccggaacgg
     2641 cgctgctcgt ggacgacgag gaggtcgtgc gcatgagcac ggccgatatg ctggcagagc
     2701 ttggatacac ggtcgtcgag gcgcgttccg ccgag
//
LOCUS       DATAIQ010000089         3917 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_4862, whole genome shotgun sequence.
ACCESSION   DATAIQ010000089 DATAIQ010000000
VERSION     DATAIQ010000089.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3917)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3917)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3917
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4862"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..459
                     /locus_tag="VHN20_01540"
     CDS             <1..459
                     /locus_tag="VHN20_01540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019197985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX2724482.1"
                     /translation="MFAATLIAASMLHALPVVAADEHRVVTPQDIRWSPGPPSLPKGA
                     EFAVLFGDPSKDGLFAMRLKFPKGYRIPPHSHPKPEVVTVVSGTFRIGMGDSADPSKA
                     QVLPAGGLVAITPGMAHYAAADEDTVVQLNSTGPWTVTYVNPKDDPRQTQ"
     gene            494..1438
                     /locus_tag="VHN20_01545"
     CDS             494..1438
                     /locus_tag="VHN20_01545"
                     /inference="COORDINATES: protein motif:HMM:NF015338.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HEX2724483.1"
                     /translation="MPRARHRQALMRLCRLAIAIGLGLGVGATLLGLLAPWFAPLELI
                     NHFRPFLLGGAAVLLGLAWLVGRHLMRAAATSLAATNLALALLPLTYGATDAAGRSPD
                     LRVVTFNMWNKGARARDTITFLRESGADVIVLQEAGAAGPIVSALRDTYPHAVPCPPA
                     RCELRLLAKQAFSESGRHARSDDNPPLVWARFVRNGFSYDAVGVHLAYPFDPERQEAH
                     VEWLSAFLAQRRHSVVLAGDLNLTPFSWKLAKLATSAGLRRHGTLLMSFPAHEWVPAV
                     LLDNVLSTTDFATVTIRTGPHLGSDHLPVIADLARIGR"
     gene            1868..2101
                     /locus_tag="VHN20_01550"
     CDS             1868..2101
                     /locus_tag="VHN20_01550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724484.1"
                     /translation="MKRYHFHLFDGQTYTWDHDGVLLPDLAAVVSEAEARARAAMGAG
                     ERVQDWSRWKIDVRGHDDITIFHYPFDEVHENV"
     gene            complement(2539..3234)
                     /locus_tag="VHN20_01555"
     CDS             complement(2539..3234)
                     /locus_tag="VHN20_01555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724485.1"
                     /translation="MRNSVTVTQTFSSLAAANAARERLAEGRGFDRYGIDGVAIERLG
                     GQFELLIRTDEFHRDQIEHLLRSSGTAFNPPAMQHHRWGAVAPALLLGAAAVTGAALY
                     TLWKRPERRPNGAHPMRISRSPQERPDTPMFTLEVGGTPVAVTKGNEGEARAVFEDQA
                     FEQKLRNLESNGRPLWNGSDLLGIRPASRAEIRALVDYADKLGFDDEEEGEIVLYLVP
                     IDSPDEFDETQDG"
     gene            3499..3729
                     /locus_tag="VHN20_01560"
     CDS             3499..3729
                     /locus_tag="VHN20_01560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724486.1"
                     /translation="MTPHRFAVGQTVTYSQVRFPTLISGAECMIVRLLPTRFNGPEYL
                     IRCEILAAELIVGEQELTVTESPPARPQALAA"
BASE COUNT          638 a         1335 c         1251 g          693 t
ORIGIN      
        1 atgtttgccg caacactgat cgccgcatcg atgctgcacg cactgcccgt tgtcgcggcc
       61 gacgagcaca gggtcgtaac cccgcaagat atcaggtggt cccctgggcc gccttcgctg
      121 cccaagggcg ccgagtttgc cgtcctcttc ggcgatccgt ccaaggacgg gttgttcgca
      181 atgcggctca aattcccgaa aggttatcgc atcccaccgc acagccaccc gaagcccgag
      241 gtcgtgacgg tggtctccgg gacgttccgc atcggcatgg gcgacagcgc cgatcccagc
      301 aaggcgcagg tgctgccggc cggcggtctg gtcgcgatca cgcctggcat ggcccattac
      361 gcagccgcgg acgaagacac cgttgtccag ctcaacagca cggggccgtg gacggtcact
      421 tacgtcaatc caaaagacga cccgcggcag acgcagtaag gtggacatgc cagttgaccg
      481 aaccgatgtg ccgatgccgc gcgctcggca ccggcaagcg ctgatgcgtc tgtgccggct
      541 cgccatcgcc atcggcctgg ggctcggcgt cggggcgacg ctgctcggct tgcttgcacc
      601 ctggttcgcg ccgctggagc tcatcaatca cttccgcccg ttcctgctcg gcggcgcggc
      661 ggtgctgctg gggctcgcct ggctggtcgg gcggcacttg atgcgggccg ccgcgacatc
      721 cctcgcggcg accaatctcg cccttgcgct tctcccgctc acctatggcg cgaccgacgc
      781 agcgggacgg tcccccgacc tgcgcgtcgt cactttcaat atgtggaata aaggggcgcg
      841 agcccgggac acgatcacgt tcctgcgcga gagcggcgcc gatgtgatcg tgttgcagga
      901 ggccggcgcg gccggaccaa tcgtctccgc cttgcgcgac acctatccgc acgcggtgcc
      961 ctgccccccg gcccgctgcg agctgcggct gctcgcgaag caggccttca gcgagagcgg
     1021 gcgccacgcg cgcagcgacg acaacccgcc gctcgtctgg gcccgcttcg tgcggaacgg
     1081 gttctcttac gatgccgtcg gcgtgcacct cgcctatccg ttcgatccgg agcgccagga
     1141 ggcgcatgtg gaatggctct ctgcctttct ggcgcagcgc cgtcattccg tcgtcctggc
     1201 gggggacctc aacctgacgc cgttctcctg gaagctcgcc aagctggcga catcggccgg
     1261 cctgcgccgt catggcacgc tgctcatgag cttcccggcc cacgaatggg tcccggccgt
     1321 cctcctcgac aatgtcctct cgacgacgga tttcgcgacc gtgacgatcc ggaccggccc
     1381 gcacctgggc tcggaccacc tgccggtcat cgccgacctc gcgcggatcg gtcgttagct
     1441 cgtttccggg ccggcctgtc cgcgacgaaa aatgccgcgg gtgggggcct gctcccgccg
     1501 gccggttcgg ccgcgaagcc agccggctta aggaagatcg ccaggcgggg ggaacttcct
     1561 ggcctttccg gaatctacga caggtgaagt cgtgtccgcg tgaggtcgag cgtagtgtcg
     1621 agttgccggg cgtctccgag cagcggccga tcgcgtttcc gattgcgacc gcgccgaaat
     1681 cgaaagcgcc ggttttcgtg tattcgccgc tgcgcgggga atggaccatc gcagtccggc
     1741 acggcgccca gtggctcgac agagccaccg gcgatgaggt ggtcagccca acccactgga
     1801 tgccgctccc aggttgaact ctgcctcgtt aggccggatc gtgccgcacc gctcaatcgc
     1861 agccgcgatg aaacgctatc atttccacct cttcgacggt cagacctaca cgtgggatca
     1921 cgacggggtc ctgctgcccg acctggcggc ggtcgtctcc gaggcggaag ccagggcccg
     1981 ggcggccatg ggcgcgggcg agcgcgtcca ggactggagc aggtggaaga tcgatgtccg
     2041 cggccacgac gacatcacca tcttccatta ccccttcgac gaggtgcacg agaacgtgtg
     2101 agcgcctgat ggaccgcgcc tttcccccgc cctgccggtc tcaggctgag ttgacgtcag
     2161 acgtaggaac gaacggccgc acccgcttcg tcacgcgggg atgcaacctt ggcaatggcc
     2221 gcgcgttgag tcggacgctt cgcgtcgaag tgaccccgtt gtcgttttca ttgtgcccga
     2281 cgaattttat tcggcgaaag tcgtattcac cccggatcga gcccggggca ggattcgccg
     2341 aagagttgcc ggctcgccgt taggagagat aatgatcgga cccgccgagc tggaagacat
     2401 ccgtctcgac ctgcaagccg gcgtgacggc gtccggcgcc gccattgatg atacgttcca
     2461 cccctgcttc catccggacg cagcgatgat ccaagtccac caatatcaac cagccgctga
     2521 tgagagcccc gcggcgtctc agccgtcctg tgtctcgtcg aactcgtccg ggctgtcgat
     2581 cgggacgaga tagaggacga tctcgccttc ctcctcgtcg tcgaaaccga gcttgtcggc
     2641 atagtcaacc agggcgcgga tctcggcgcg cgacgccggc cggatcccca ggagatcgct
     2701 gccgttccac agcggtcggc cattgctctc gagattgcgc agcttctgct caaaggcctg
     2761 atcttcgaag acggcccggg cctcgccctc gttgcccttg gtgacggcga cgggcgtgcc
     2821 gcccacctcg agcgtgaaca tcggcgtgtc aggccgctcc tgcggcgacc gcgagatgcg
     2881 catcgggtgg gcgccattgg gtcggcgctc ggggcgcttc cacaaagtgt aaagcgcggc
     2941 gcctgtgacc gcggcggcgc caagcagcag ggccggcgcg accgcccccc aacggtgatg
     3001 ttgcatcgcg ggcgggttga aggcggttcc cgacgagcgc agcagatgct cgatctgatc
     3061 cctgtggaat tcatcggtgc ggatgagcag ctcgaactgg cctccgaggc gctcgatagc
     3121 gacgccgtcg atgccataac ggtcgaagcc gcgcccttcg gcgagacgct cccgagcggc
     3181 attggcggcc gccaggctgg aaaatgtctg cgtcacggtc acgctgttcc gcatcgaacc
     3241 ctcccttgat cgtgttccgg cgaagcctgc cccggcgtag gcgccgcatc gccgcaaacg
     3301 cgtccgcgga cctggtcggg atcatgcgct gccgttccaa ccctggacaa ttcgcggcgg
     3361 cttgcgaggg ttccgagggg ctttgccagc gctcgccgcg ggcccgtaca cgcattgatt
     3421 acaattttgt catttcggtt cacgaaaaat gacgaatcgg cccataagta gacggttccg
     3481 attcgcaatg ggtctgccgt gacaccccat cgttttgccg tcggccagac ggttacctat
     3541 tcgcaagtgc gattcccgac cctgatctcc ggggccgaat gcatgatcgt gcgcctgctt
     3601 ccgacccgct tcaacgggcc ggaatacctg atcaggtgcg agatcctggc ggccgaactg
     3661 atcgtcggag agcaggagct caccgttacg gaatcgcctc ctgcgcgccc gcaggcgctc
     3721 gccgcctgaa gcacgtcgac caggcccgca aaaaccccgc cagtcgtggc aggctgacgg
     3781 ggcgtctcgt ctcagttgct cttagcgtgg tggaggtccc accatgccgt caacgcgaga
     3841 gccgcgggca cgtttcagct ttgcgccaaa aaaccccggc agcgaattct ggaatgaccc
     3901 aatagaaaac cccgctc
//
LOCUS       DATAIQ010000090         2290 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_325198, whole genome shotgun sequence.
ACCESSION   DATAIQ010000090 DATAIQ010000000
VERSION     DATAIQ010000090.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2290)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2290)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2290
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_325198"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..421)
                     /locus_tag="VHN20_01565"
     CDS             complement(<1..421)
                     /locus_tag="VHN20_01565"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007609995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-transferase"
                     /protein_id="HEX2724487.1"
                     /translation="MDAQELIARRIARELRDGMLVNLGIGIPTLVANFVPAGIHVFFQ
                     SENGLIGTGPVPEPGMALPWLTDAGGRPVTALPGASTFDSAMSFGLIRGGHVDLTILG
                     GLQVDQGGHLANWMIPGKMVPGMGGAMDLVTGAKRVIV"
     gene            complement(434..1075)
                     /locus_tag="VHN20_01570"
     CDS             complement(434..1075)
                     /locus_tag="VHN20_01570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018262110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacid CoA-transferase subunit A"
                     /protein_id="HEX2724488.1"
                     /translation="MKTISLQDGVAMIANGSSLMIGGFMGVGTPEPIIDELVRQRKGD
                     LTVIANDTSFPGVGIGKLIAARLCRRVVVSHIGLNPETQKQMMAQELEVDLVPQGTLV
                     ERIRAGGCGLGGILTPTGVGTVVEDGKRKISVDGRDYLLETALRADYALVHAFIADYL
                     GNLSYALTARNFNPLMAMAAETVFVQAENVVPVGVVSPDHVVTPAPLVDYLVA"
     gene            complement(1135..1941)
                     /gene="fabI"
                     /locus_tag="VHN20_01575"
     CDS             complement(1135..1941)
                     /gene="fabI"
                     /locus_tag="VHN20_01575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020174045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004318 - enoyl-[acyl-carrier-protein]
                     reductase (NADH) activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase FabI"
                     /protein_id="HEX2724489.1"
                     /translation="MNYQSDVLARVAADSKVLHGKRAFILGIANENSIAYGCARVFRQ
                     LGAELAVTYLNEKARRFVEPLARELGATIFAPCDVAKKGELEAVFEEMRKVWGSLDIA
                     LHSIAFAPKEDLQGRLVDSSDEGFKTAMDISCHSFVRMARLAEPLMSNGGTLLAMSYH
                     GANKVVPNYNLMGPVKAALESVVRYLAYELGEKQIRVHAVSPGPLKTRAASGLKDFDV
                     LLTEALERAPIGELVDIDDVGLTAAYLTTPFARRLTGTTTYVDGGLSIMA"
     gene            complement(1941..>2290)
                     /locus_tag="VHN20_01580"
     CDS             complement(1941..>2290)
                     /locus_tag="VHN20_01580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="poly(3-hydroxybutyrate) depolymerase"
                     /protein_id="HEX2724490.1"
                     /translation="ELVGEDLGLVDLPGDVVREIIRDQSLIVDFEPELALATLPKLLS
                     APEDRRFTFDLLGRLKGKVEANAQQIALMAEIRRVLSEESAITLPAPTQAPAIIGREV
                     ARGARHNPRTRAS"
BASE COUNT          415 a          762 c          705 g          408 t
ORIGIN      
        1 ccacgatcac ccgctttgcg ccggtgacga ggtccatggc gccgcccatg cccggaacca
       61 ttttgcccgg tatcatccag ttcgcgaggt gtccgccttg gtcgacctgc aggcccccca
      121 ggatcgtcag atcgacatgt ccgccgcgga tcaggccgaa cgacatggcg ctgtcgaagg
      181 tcgaggcgcc cggtaaggcg gtgaccggcc gcccgccggc gtccgtcagc cacggcagcg
      241 ccatcccggg ctctggaact ggcccggtgc cgataagccc attctccgac tgaaagaaca
      301 cgtggattcc tgccggaacg aaattcgcta cgagggtcgg gataccgatc ccgaggttga
      361 cgagcatccc gtccctcagc tcgcgggcaa tgcgcctggc gatcaattcc tgcgcatcca
      421 tgggtcactc ccctcatgca acgaggtaat cgacgagcgg cgccggcgtc acgacatggt
      481 cgggcgacac gaccccgacg ggcacaacat tctccgcctg cacaaagaca gtctcagccg
      541 ccatcgccat cagcgggttg aagttgcgcg cggtgagcgc gtagctgagg ttgcccaggt
      601 aatcggcgat gaaggcgtgc accagcgcgt agtcggcgcg cagggccgtc tccagaaggt
      661 aatcgcgccc atcgaccgag atcttgcgct tgccgtcttc gacgaccgtg ccgacgccgg
      721 tcggcgtgag gatgccgccg aggccgcaac cgccggcgcg gatgcgttcg acgagcgtcc
      781 cttgcggcac gagatcgacc tcgagctcct gggccatcat ctgcttctgc gtttcgggat
      841 tgaggccgat atggctcacc acgaccctgc ggcacagtcg ggcggcaatg agcttgccga
      901 tgccgacgcc cgggaacgac gtgtcattgg cgatgacggt caggtcgcct ttgcgttggc
      961 ggacaagctc gtcgatgatc ggctcgggcg tgcccacgcc cataaagccg ccgatcatca
     1021 agctcgaacc gttggcgatc atggcgacgc catcctggag agaaatcgtc ttcatcgccg
     1081 cgctcctcgt gcgccagcca accaccttag gccggcaatt acggccaacc gccctcacgc
     1141 catgatgctg agtccgccgt caacgtatgt ggtcgtaccc gtcagccgcc gtgcgaaagg
     1201 cgtcgtcaaa tacgcggccg tcaaacccac gtcgtcgatg tcgaccagtt caccaatcgg
     1261 cgcacgttcg agcgcttcgg tgagcagcac gtcaaaatcc ttgaggccag atgcggcccg
     1321 cgtcttaagc gggccggggg acacggcatg aacccgaatc tgtttttcgc ccagctcgta
     1381 ggccaggtag cggacgacac tttcaagggc cgccttgacc ggccccatca ggttgtagtt
     1441 cggcacaacc ttgttggcgc catgatagct catcgcaagc agcgttccgc cgttgctcat
     1501 caggggctcc gccaagcggg ccatgcgcac gaaggaatgg cacgagatgt ccatcgcggt
     1561 cttaaaaccc tcatccgagc tgtcgaccag ccggccttgg agatcctcct tcggcgcgaa
     1621 ggcgatcgag tggagcgcga tgtcgagact gccccatacc ttgcgcattt cttcgaagac
     1681 cgcttcgagt tcgccctttt tcgccacgtc gcaaggcgcg aaaattgtcg ctcccagctc
     1741 gcgcgccagc ggctcgacga agcggcgggc cttctcgttc agataggtga cggcgagctc
     1801 ggcgccgagc tgacggaaga cccgcgcgca gccgtaggcg atcgaattct cgttggcgat
     1861 gcccaggatg aaggcgcgct tgccatgcaa caccttggag tcggcggcga ccctggccag
     1921 gacgtccgat tgatagttca tcagctcgcc ctcgtgcgtg ggttgtgacg ggcccctcgg
     1981 gcaacctcgc gcccgatgat tgccggagct tgcgtcggtg ctggcagcgt gattgcggat
     2041 tcttcactca ggactcgacg gatctcggcc atgagcgcta tctgctgcgc attcgcctcg
     2101 acctttcctt tcagccgacc gagcagatcg aaggtaaagc gccggtcctc gggcgccgac
     2161 aggagcttcg gaagcgttgc gagcgccagc tccggctcga aatcgacgat gagcgattga
     2221 tcgcgaatga tctcgcgcac cacatcgccc ggaaggtcga ccagcccgag atcctcgccc
     2281 accagctcgc
//
LOCUS       DATAIQ010000091         2378 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_48220, whole genome shotgun sequence.
ACCESSION   DATAIQ010000091 DATAIQ010000000
VERSION     DATAIQ010000091.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2378)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2378)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2378
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_48220"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2378)
                     /locus_tag="VHN20_01585"
     CDS             complement(<1..>2378)
                     /locus_tag="VHN20_01585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="catalase family protein"
                     /protein_id="HEX2724491.1"
                     /translation="RWQMTATALRVERWIERRARNVLHVMRRTDPYYRPLFNRTLREP
                     IAAVVQALINWRRPNEQLALAEERHMPGEKEALDSIIADMGAYMRAMYRPGEFLRAGN
                     TKTHGLVRGEVIIRDDIPEHIRRGIFKAPRTYKAWVRFSGPGPDVPADIDDVGFGSIA
                     VKIMGVDGERLTGADGLDDERHTQDLICVSTPTFVTPNIVENAKLQANSNLRGTPFMY
                     FWRPGDTHILDFFMQGLWNETKTSPLESQYWSCVPYLLGPSQAMMYSVRPKASTRSRI
                     PNLPFRPPDNYLRDALADTLAVREAEFDILVQVQTDAHRMPIENAAVRWPEKLSPWVP
                     VATLRLPRQSPSWEAQVALAHRLSYNPWHCLSDHRPLGNQSRARLRMYRELSALRQRE
                     NRTPHIEPTGDEKLASASDGAAGAHDGRWEEQNGITIFAAVKPDAVNALAQELAAIQK
                     QVEADGTPFSRSARIHYARFVLIPEEIDPDLGHAGPALMYLADFDGAKALHLDEIATI
                     AAAEFDRLSPFLADAIAPGVAARRRWLDDHVIEDATHYVNAVGRTVQQIRAEAMLRGR
                     IEDFLDRAPPAQDAEQLRRQVQDFVRGEPSLRWALKPVDDRAWRLRRTLGRIAIILIA
                     IPLLIVTLPVLIVWLLAIRWHEKTDRAEPPASEPAHVAALAAVEDRTLQNQFSALGFR
                     KAAWIRRATPAVFLWLANIVVRYFFDRNSLAGLKTIHFARWTWIDGKRRQLFISNYDG
                     SHENYMGDFIDIVAWGLNAAFSHGPQYPHTRWLIVDGAWNELAFKRHNRNRQ"
BASE COUNT          362 a          752 c          861 g          403 t
ORIGIN      
        1 atctgccggt tgcggttgtg gcgcttgaag gcgagctcgt tccaggcgcc gtcgacgatc
       61 agccagcggg tgtgcggata ttgcgggccg tggctgaagg cggcgttgag gccccaggcg
      121 acgatgtcga tgaagtcgcc catatagttc tcgtggctgc cgtcgtagtt gctgatgaag
      181 agctggcggc gcttgccgtc gatccaggtc cagcgggcga agtggatcgt cttcagtcct
      241 gccaggctgt tgcggtcgaa gaaatagcga acgacgatgt tggcgagcca caggaacacc
      301 gccggggtgg cacgccggat ccacgccgcc ttgcggaagc cgagcgcgct gaactggttc
      361 tgcaaagtgc ggtcctcgac cgcggcaagc gccgcgacat gcgccggctc cgaggccggc
      421 ggctcggccc ggtcggtctt ctcgtgccag cggatggcca gcagccagac gatcagcacc
      481 ggcagggtga caatgaggag cgggatcgcg atcaggatga tggcgatgcg gccgagcgtc
      541 cgccgcagac gccaggcgcg gtcgtcgacc ggcttcagcg cccagcgaag cgacggctcg
      601 ccgcgcacga aatcctggac ctgccggcgc agctgctccg catcctgcgc gggaggggcg
      661 cggtcgagaa aatcctcgat ccgcccgcgc agcatcgcct cggcccggat ctgctgcacg
      721 gtgcgaccga ccgcattgac gtagtgggtc gcgtcctcga tcacatggtc gtcgagccaa
      781 cggcgccggg ccgcgacgcc aggggcaatc gcatcggcga ggaatgggct gaggcggtcg
      841 aactcggcgg cggcgatcgt cgcgatctcg tcgagatgca gcgctttcgc cccgtcgaaa
      901 tcggccaggt acatcaatgc cggcccggca tggccgagat cgggatcgat ctcctccggg
      961 atgaggacga agcgcgcata gtggatgcgc gccgagcggc tgaatggggt gccgtcggct
     1021 tcgacctgct tctggatcgc ggcgagctcc tgcgcgagcg cgttcacggc atccggcttc
     1081 acggcggcga agatcgtgat gccgttctgc tcttcccagc ggccgtcgtg cgcgcccgcc
     1141 gcgccgtcgg acgcgctggc gagcttctcg tcgcccgtcg gctcgatatg cggcgtcctg
     1201 ttctctctct gccgaagggc ggagagctcc cggtacatcc ggaggcgggc gcggctctgg
     1261 tttccgagcg gccggtggtc ggagagacag tgccatgggt tgtaggagag ccggtgcgcg
     1321 agcgcgacct gcgcttccca gctcgggctc tggcgcggca ggcgcagggt tgcgaccggc
     1381 acccacggcg acagcttctc gggccagcgc accgccgcgt tctcgatcgg catgcgatgc
     1441 gcgtcggtct gcacctggac gaggatgtcg aactccgcct cgcgcaccgc gagcgtatcg
     1501 gcgagcgcgt cgcgcaggta gttgtcgggc ggacggaacg gcaggttcgg gatgcggctg
     1561 cgcgtcgacg ctttcggccg cacggaatac atcatcgcct gactggggcc gagcaggtag
     1621 gggacgcagc tccagtattg cgactcgagc gggctggtct tggtctcgtt ccacagaccc
     1681 tgcatgaaga agtcgaggat atgcgtgtcg ccgggccgcc agaaatacat gaacggcgtg
     1741 ccgcgcaggt tcgagttggc ctggagcttg gcgttctcga cgatgttcgg cgtcacgaag
     1801 gtcggggtgc tgacgcaaat cagatcctgc gtgtgccgct cgtcgtccag gccgtctgcg
     1861 ccggtcagcc gttcgccgtc gacgcccatg atcttgacgg cgatgctgcc gaagccgacg
     1921 tcgtcgatat ccgccggcac gtcgggacca ggcccggaaa agcgcaccca cgccttgtag
     1981 gtgcgcggcg ccttgaagat accgcggcgg atgtgctcgg ggatgtcgtc gcggatgatg
     2041 acctcgccgc gcacgaggcc gtgcgtcttg gtgttgccgg cgcgcaggaa ctcgccggga
     2101 cggtacatgg cccgcatgta ggcgcccatg tcggcgatga tcgaatcgag cgcctccttc
     2161 tcgcccggca tgtgccgttc ctcggccagg gcaagctgct cgttcgggcg gcgccagttg
     2221 atcagggcct ggacgacggc ggcgatcggc tcgcgcaggg tacggttgaa aagcggacgg
     2281 taatacgggt ccgtccgccg catcacatgc aggacatttc gcgcgcggcg ctcgatccat
     2341 cgttcgacgc gcagcgcggt cgcggtcatt tgccagcg
//
LOCUS       DATAIQ010000092         2827 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_420085, whole genome shotgun sequence.
ACCESSION   DATAIQ010000092 DATAIQ010000000
VERSION     DATAIQ010000092.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2827)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2827)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2827
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_420085"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..727)
                     /locus_tag="VHN20_01590"
     CDS             complement(<1..727)
                     /locus_tag="VHN20_01590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate/isopropylmalate family dehydrogenase"
                     /protein_id="HEX2724492.1"
                     /translation="MDKAHLTLGILEGDDIGHEVVPAAVAVAKAAAERHGLKVDWRPM
                     PIGRRALDTHGSTMPEGTLEALSKMDGWILGPIGHRDYPKGPGAINPHPILRKHFNLF
                     ANVRPTRSYPGLGCIYDDVDLVIVRENNEGFQPDRNVVAGSGEFRPSEDMTISVRVIS
                     RVGSRRVARAALEIARHRKKRLTFVHKNTVFKLGCGMFVEECYKAAEEYPDVKVDEVI
                     VDTMAMRLVRDPQSFDVIVTTNMF"
     gene            complement(766..2172)
                     /locus_tag="VHN20_01595"
     CDS             complement(766..2172)
                     /locus_tag="VHN20_01595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HEX2724493.1"
                     /translation="MTGEGAAGLTKHVAAFIEQTRAEDIPDDVIALGKKSILDGLGLA
                     LSGSVAKSGELVRRHLDDLGLGAGAATLIGSQRRVPPRFAAFANGVGIHADDYDDTQL
                     AVAPDRVYGLLTHPTAPALPAALAVGETVGADGRTTMLAYHLGVEVECKIAEAINPRH
                     YQTGFHATATCGTFAAAAASAKLLRLDADAIARALSIAGSQSAGLRENFGTMTKPFHA
                     GRAAESGVAAAQFASYGWTATDKILEAPRGFFAAAGGGYDAKAIEGKLGAPWTFAEPG
                     ISIKPHPSGSLTHPGMTEMLRLIREHRIRAGDVRRVRVGTNSNMPNALIHHRPRNELQ
                     AKFSMEFCMAILLLEGRAGLNEFTDEVVLRPDVQAMIEKIDFIVDDEAERAGYHKMTT
                     IIDIEMNDGSKVSGRADFGKGSPADPMSYDDVAEKFRECAEFARFPRDKTQSVVGMVR
                     DLETLPSIDRLMSALRLS"
     gene            complement(2207..>2827)
                     /locus_tag="VHN20_01600"
     CDS             complement(2207..>2827)
                     /locus_tag="VHN20_01600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016845494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX2724494.1"
                     /translation="LRNTLLLGVLTAPIGTAIALVVSYLVSRRAVPGAPMLGYLATAP
                     IAIPGIVLGVGLFLSYSHPSLMLYGTLWILLIAFLTIEMPAGYQQLSSAFKSIHPELE
                     EASRILGATRMRALRQITAPLLRTSVVATWCFIFIGTIRELSAMILLTTAETKLVSVI
                     IYDLNESGDLGAISVLGIMLLVVSFAVVLLANRLPVLGGQRLPALR"
BASE COUNT          447 a          913 c          981 g          486 t
ORIGIN      
        1 cgaacatgtt cgtcgtaacg atcacgtcga agctctgcgg gtcgcgcacg agccgcatgg
       61 ccatcgtgtc gacgatcacc tcgtcgacct tcacgtcggg atactcttcc gccgccttgt
      121 agcattcctc gacgaacatg ccgcagccga gcttgaacac ggtgttcttg tgcacgaagg
      181 tcaggcgctt cttgcgatgg cgcgcgatct cgagggctgc gcgcgcgacg cgccggctgc
      241 cgacgcgcga gatcacgcgc acggagatcg tcatgtcctc gctggggcgg aactcgcccg
      301 agccggcgac gacgttgcgg tcgggctgaa agccctcgtt gttctcgcgc acgatgacga
      361 gatcgacgtc gtcgtagatg cagccgaggc cgggataaga gcgcgtcggc cgcacgttgg
      421 cgaacaggtt gaaatgcttg cgcaggatcg ggtgcggatt gatggcgccc gggcctttgg
      481 ggtagtcgcg gtgcccgatc ggtccgagga tccagccgtc catcttcgac agcgcctcga
      541 gcgttccctc gggcatggtc gagccgtgcg tgtcgagcgc gcggcggccg atcggcatcg
      601 gccgccagtc gaccttgagg ccgtggcgct cggcggcggc tttcgccacc gccacggcgg
      661 cgggcacgac ctcgtggccg atgtcgtcgc cttcgaggat gccgagggtc agatgtgcct
      721 tgtccatgcg ttacagcctt ccgggcaggt ttgcggttat cgttcttacg ataggcgcag
      781 cgcgctcatc aggcgatcga tcgacggcag cgtttcgagg tcgcgcacca tgccgaccac
      841 cgattgggtc ttgtcacgcg ggaagcgcgc gaactccgca cattcgcgga atttctccgc
      901 gacatcgtcg tagctcatcg gatcggcggg gctgcccttg ccgaaatcgg cacggccgga
      961 gaccttgctg ccgtcgttca tctcgatgtc gatgatggtc gtcatcttgt ggtagccggc
     1021 gcgctccgct tcgtcgtcga cgatgaaatc gatcttctcg atcatcgcct gcacgtccgg
     1081 gcgcagcacc acctcgtcgg tgaactcgtt caatcctgcg cgaccctcga gcagcaggat
     1141 ggccatgcag aactccatcg agaacttggc ctgcagctcg ttgcgcgggc gatgatggat
     1201 cagcgcgttc ggcatgttgg agttggtgcc gacgcgcacg cgcctgacgt cgccggcgcg
     1261 gattcggtgc tcgcggatca ggcgcagcat ctcggtcatg cccggatgcg tcagcgatcc
     1321 ggaaggatgc ggcttgatcg agatgccggg ctccgcaaac gtccacggcg cgccgagctt
     1381 gccctcgatg gctttcgcat cgtaaccgcc accggcggcc gcgaagaagc cgcgcggcgc
     1441 ctccaggatc ttgtcggtcg ctgtccagcc gtagctcgcg aattgcgctg ccgccacgcc
     1501 gctctccgcg gcacgcccgg catggaacgg cttggtcatc gtgccgaaat tctcgcgcag
     1561 gcccgccgac tggctgccgg cgatggagag cgcgcgcgcg atcgcatccg cgtcgagccg
     1621 caggagcttc gcgcttgccg ccgccgccgc gaaggtgccg caggtcgcgg tggcgtggaa
     1681 gccggtctgg tagtgacgcg ggttgatcgc ttcggcgatc ttgcactcga cctcgacgcc
     1741 gagatggtag gcgagcatgg tcgtgcgccc atcggcgccg accgtttcgc cgaccgcaag
     1801 cgccgccggc agggcagggg cggtcggatg cgtgagaagc ccgtagacgc ggtcgggcgc
     1861 gaccgccagc tgggtgtcgt cgtaatcgtc ggcgtggatg ccgacgccgt tggcaaaggc
     1921 ggcgaagcgc ggcggcacgc ggcgctggct gccgatgagg gtcgccgcac cggcaccgag
     1981 gccgagatca tccaggtgac gccgcacgag ctcgccgctt ttcgcgacgg agccggagag
     2041 cgcgaggccg agcccgtcga ggatcgattt cttgccgagg gcgatgacgt cgtcggggat
     2101 gtcctcggcc cgtgtctgct cgatgaacgc ggccacgtgt ttcgtgagcc cggccgctcc
     2161 ttcgcccgtc attgcagtcc tccgcgtgtt ctcgctgtgc gcggtttcac cgcaaggccg
     2221 gaagccgctg gccgccgagc accggcagcc ggttggcgag cagcaccacc gcgaacgaca
     2281 cgaccagcag catgatgccg agcaccgaga tggcgccgag atctccgctt tcgttgaggt
     2341 cgtagatgat caccgacacc agcttcgtct cggcggtggt caggaggatc atcgccgaca
     2401 gttcgcggat cgtgccgatg aaaatgaagc accaggtcgc gaccacgctg gtgcgcagga
     2461 gcggcgccgt gatctggcgc agcgcccgca tgcgcgtcgc gccgaggatg cggctcgcct
     2521 cctcgagctc gggatgaatg ctcttgaaag ccgacgacag ctgctggtag cccgcgggca
     2581 tctcgatggt gaggaacgcg atcagcagga tccagagcgt cccgtatagc atcaggctcg
     2641 gatgagagta gctgaggaac aggccgacgc cgagcacgat gccgggaatg gcgatcggcg
     2701 ccgtcgccag gtaaccgagc atcggcgcgc ccggcacggc gcgacgcgac accaggtagc
     2761 tcacgaccag ggcgatggcc gtgccgatgg gtgccgtcaa cacgccgagc agcaaggtat
     2821 tgcgcag
//
LOCUS       DATAIQ010000093         1906 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_232983, whole genome shotgun sequence.
ACCESSION   DATAIQ010000093 DATAIQ010000000
VERSION     DATAIQ010000093.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1906)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1906)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1906
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_232983"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..228)
                     /locus_tag="VHN20_01605"
     CDS             complement(<1..228)
                     /locus_tag="VHN20_01605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015339504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B"
                     /protein_id="HEX2724495.1"
                     /translation="MGLIAETRAPLVAPEAKGIIDPNTGKPVGADDPFFTTVNNELAD
                     KGFLVTSTEDLFQWARTGSLWWMTFGLACCAV"
     gene            complement(219..584)
                     /locus_tag="VHN20_01610"
     CDS             complement(219..584)
                     /locus_tag="VHN20_01610"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009450025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit A"
                     /protein_id="HEX2724496.1"
                     /translation="MTNLLTDYLPLVIFIGVAIVIAAALLIAPFLVAYKQPDPEKLSA
                     YECGFNAFDDARMKFDVRFYLVAILFIIFDLEVAFLFPWAITFGGLGWYGFWSMMIFL
                     AVLTIGFIYEWKKGALEWD"
     gene            831..1226
                     /locus_tag="VHN20_01615"
     CDS             831..1226
                     /locus_tag="VHN20_01615"
                     /inference="COORDINATES: protein motif:HMM:NF018151.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HdeA/HdeB family chaperone"
                     /protein_id="HEX2724497.1"
                     /translation="MTRLAASGAMLLAMLAGGSPAHAQVADLLRARCADLLELRHNDR
                     GQLIVWLHGYYAGAAQRAVIDRPKLEAAVTAIEQACEKDRTLPLIGMEARAIFLGEPL
                     PQIQPGASSASGAGSATPPPPRSGPALGR"
     gene            complement(1367..1795)
                     /locus_tag="VHN20_01620"
     CDS             complement(1367..1795)
                     /locus_tag="VHN20_01620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015931294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low affinity iron permease family protein"
                     /protein_id="HEX2724498.1"
                     /translation="MPISRLFAEFAGAVAHAAGRPWIFALSVLVIVLWGASGPVFGFS
                     DTWQLIVNTATTIVTFLMVFLIQNTQNRDGAAIQAKLDELIRASAAQNLYIGIEHLTE
                     EELEELRRKCEARAKKDIVADRAEDKANKKAAAAAKRAAG"
BASE COUNT          357 a          609 c          627 g          313 t
ORIGIN      
        1 gacggcgcag caggcgaggc cgaaggtcat ccaccagagc gagccggtcc gggcccactg
       61 gaagagatcc tcggtggagg tgacgaggaa gcccttgtcg gccagctcat tgttgacggt
      121 cgtaaaaaag ggatcgtcgg ctccgaccgg cttgccggtg ttcggatcga tgatcccctt
      181 cgcctccggc gcaaccagag gcgcgcgcgt ttcggcgatc agtcccattc aagggcccct
      241 ttcttccatt catagatgaa gccgatggtg agcacggcga ggaagatcat catcgaccag
      301 aacccgtacc agccgaggcc gccgaacgtg atggcccagg ggaacaggaa cgcaacttcc
      361 agatcaaata taatgaacag gatcgccacc aggtagaagc gcacgtcgaa tttcatgcgc
      421 gcgtcgtcga aagcgttgaa gccgcattca tacgccgaca gcttctccgg atcgggctgc
      481 ttgtaggcca ccaggaaggg cgcgatcagc agcgccgccg cgatcacgat cgccacgccg
      541 atgaagatca cgaggggcag gtagtcggtc agaagattgg tcatgcggca cccggagaca
      601 gccgtggacc ggccacgctg gcgcattcgg cccttgagac caagctgaga agccggacgt
      661 ggtcagaatg gcgcaagggg cgaaagcgag cgaggcatta gcccagcgct ccgggagtga
      721 caagggctcg cggcgtcgca caaacaggca atgactcgac ggaaggcttt gtctggccgt
      781 agcttccgcc cgctcgacgc gattcggtcg gcggcttggg atcagcatcg atgacacgac
      841 ttgcagcatc gggagcgatg cttctggcca tgctcgccgg cggcagcccg gcgcatgcgc
      901 aagtggcgga cctgctccgc gccagatgcg ccgatctgct ggagttgcgc cacaacgatc
      961 gcgggcagct gatcgtctgg ctgcatggct attatgccgg tgcagcgcaa cgggcggtga
     1021 tcgaccgccc gaagcttgag gccgccgtca ccgcgatcga gcaggcctgc gagaaggatc
     1081 gcaccctgcc gctgatcgga atggaggcgc gcgccatctt ccttggggag ccgctgccgc
     1141 agatacagcc gggcgcctcg tcggcctctg gcgccggcag tgcgacgccg ccccctcccc
     1201 gctccggccc agcgctcggc cgctagcgtg gaacggctct cgtcttcgac gcggcatttc
     1261 cctccacgtc ccggcccgct tcgccggaaa atgctctaag cccctgagtc ggaccacctt
     1321 atccggcgca aggcgcggcg acgtagccgc aacgggccag ggccggtcag ccggcggcgc
     1381 gtttggctgc cgccgccgcc ttcttgttgg ccttgtcctc cgcgcgatcg gcgacaatgt
     1441 ccttcttggc gcgggcttcg cacttcctgc gaagctcctc gagctcttcc tcggtcagat
     1501 gctcgatgcc gatatagagg ttctgggcag cgctggcgcg gatcagctcg tcaagcttgg
     1561 cctggatggc ggcgccgtcc cggttctgcg tgttctggat caggaacacc atcaggaacg
     1621 tgacgatggt ggtggccgtg ttgacgatca gctgccaggt gtcggagaag ccgaagaccg
     1681 gcccgctcgc tccccagagc acgatgacca gcacgctcag cgcgaaaatc cagggccggc
     1741 cggccgcgtg agcgacggcg ccggcgaact cggcgaacag cctggagatc ggcatgccgt
     1801 tgcctccaaa tcccgtgtgt gaatcccgtg ggagattatt cggggcacgc catcaggcaa
     1861 gatgaccagc aggctcgtcc gacggcttga agaaacaagg caaatc
//
LOCUS       DATAIQ010000094         1673 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_186893, whole genome shotgun sequence.
ACCESSION   DATAIQ010000094 DATAIQ010000000
VERSION     DATAIQ010000094.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1673)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1673)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1673
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_186893"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..493)
                     /gene="lepB"
                     /locus_tag="VHN20_01625"
     CDS             complement(<1..493)
                     /gene="lepB"
                     /locus_tag="VHN20_01625"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: protein motif:HMM:NF021981.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HEX2724499.1"
                     /translation="MAIESASEPAAPPTAEDRPEESRGSALWRELKGIFWVVLAVLAF
                     HSFVAKPFYIPSESMMPVLLKGDRLVVTKYPYGWSFVSPTIPNPAAIFRTMILRGPAE
                     PWGITLPPMKGRVLGRLPKRGDVVIVTPPGSNEDYIKRVVGLPGDTIELRGGRLIING
                     APIR"
     gene            complement(498..905)
                     /gene="acpS"
                     /locus_tag="VHN20_01630"
     CDS             complement(498..905)
                     /gene="acpS"
                     /locus_tag="VHN20_01630"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012336246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008897 - holo-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HEX2724500.1"
                     /translation="MIVSIGSDLCSIERIQKSLDRWGDKFLQRVFTDTERAKAARRPF
                     TRAGTLAKRFAAKEAFSKAVGTGFKRGVFMRDIGVVNLPSGQPTLALTGGAKQRLDAL
                     TPAGHAMHVHLTMTDDHPWAQAFVVLEARKTES"
     gene            complement(902..1630)
                     /locus_tag="VHN20_01635"
     CDS             complement(902..1630)
                     /locus_tag="VHN20_01635"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012111794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033856 - pyridoxine 5'-phosphate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HEX2724501.1"
                     /translation="MSGKLRLGVNIDHVATVRNARGAGYPDPVRAGLIAAEAGADGIT
                     AHLREDRRHITDDDIARLSAELPVPLNFEMAATEEMLGIALRYRPHAACIVPEKREER
                     TTEGGLDAAGQHNHLADYCRRLREAGVRVSLFIEPDERQVEAALRLGAPVVEFHTGRY
                     AHLEGEERAAELRRIADMAALAAKNGVEPHAGHGLTFDNVQPIAAIPQLAELNIGHFL
                     VGEAICTGLAEAVKRMRALMDSAR"
BASE COUNT          256 a          590 c          562 g          265 t
ORIGIN      
        1 accggatcgg ggcgccgttg atgatcagcc gcccgccgcg cagctcgatc gtgtcgccgg
       61 ggaggccgac gacgcgcttg atataatcct cgttcgatcc cggcggagtg acgatgacca
      121 cgtcgccgcg cttgggcagg cggccgagca cccggccctt catcggcggc aaggtgattc
      181 cccacggctc ggccggcccg cgcaggatca tggtgcggaa gatcgccgcc ggattgggaa
      241 tggtaggcga gacgaacgac cagccgtagg gatatttggt gaccaccagc cggtcgccct
      301 tcaatagcac cggcatcatc gattccgacg ggatgtagaa cggcttggcg acgaagctgt
      361 ggaacgccag caccgccagc acgacccaga agatgccctt cagctcgcgc cacaaggcgg
      421 agccgcggct ttcctcgggc cggtcctcgg cggtcggcgg cgcggccggc tcgctagcgc
      481 tttcgatggc caagatgtca ggactccgtc ttgcgggctt cgaggaccac gaaggcctgc
      541 gcccagggat gatcgtcggt catcgtcaga tgaacgtgca tggcgtggcc cgccggggtc
      601 agcgcgtcaa gccgctgctt ggcgccgccg gtcagcgcca gcgtcggctg gccgctcggc
      661 agattgacca cgccgatgtc cctcatgaac acgccgcgct tgaagccggt cccgaccgcc
      721 ttcgaaaagg cctctttggc ggcgaagcgc ttggccagcg tgcccgcacg agtgaacggc
      781 cgccgcgccg ccttggcccg ctcggtgtcg gtgaacacgc gctgcaggaa cttgtcaccc
      841 cagcggtcga gcgacttctg gatccgctcg atcgagcaca aatcggaacc gatgctgacg
      901 atcaccgcgc cgagtccatc agcgcccgca tccgtttcac cgcctcggcg agcccggtgc
      961 agatcgcttc gccgaccagg aaatggccga tgttgagctc ggccagctgc gggatcgcgg
     1021 cgatcggctg gacattgtcg aacgtcagcc cgtggccggc gtgcggctcg accccgttct
     1081 tggcggcgag cgcggccatg tcggcgatcc gccggagctc tgccgcccgc tcctcgccct
     1141 cgagatgggc gtagcggccg gtgtggaact cgaccaccgg cgcgccgagg cgcagcgccg
     1201 cctcaacctg ccgctcgtcg ggctcgatga acaggctgac ccgcaccccc gcctcgcgca
     1261 gccgccggca atagtccgct agatgattgt gctggccggc ggcgtcgagc ccgccctcgg
     1321 tggtccgctc ctcgcgcttt tcggggacga tgcacgcggc gtggggccga tacctgagcg
     1381 cgataccaag catctcctcg gtcgccgcca tctcgaagtt gagcggcacc ggcagctcgg
     1441 cgctcaatct cgcaatgtcg tcgtcggtga tgtggcgccg gtcctcgcgc aaatgggcgg
     1501 tgatcccgtc ggcccccgcc tcggcggcga tcagccccgc ccgaaccggg tcgggatagc
     1561 ccgcgccgcg cgcgttcctg accgtcgcga catggtcgat gttgaccccg agacggagct
     1621 tgccgctcac cggcaggcca ccgtgctcag caggtcgaag ccaaagcctt tgc
//
LOCUS       DATAIQ010000095         2279 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_420208, whole genome shotgun sequence.
ACCESSION   DATAIQ010000095 DATAIQ010000000
VERSION     DATAIQ010000095.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2279)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2279)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2279
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_420208"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..219)
                     /locus_tag="VHN20_01640"
     CDS             complement(<1..219)
                     /locus_tag="VHN20_01640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012252956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724502.1"
                     /translation="MTTIFLDCDGVLADFDKGASRVFGMAPGDYERRFGLGKFWARLA
                     ATPDFFNTLDLLPDALDLFEAVRHENPVI"
     gene            complement(444..635)
                     /locus_tag="VHN20_01645"
     CDS             complement(444..635)
                     /locus_tag="VHN20_01645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724503.1"
                     /translation="MPLARIVSADGRARLGEREARTIMSRRQGLLLAHDHHGSLMLIE
                     SAPRFLSRDEVGQLGRRVR"
     gene            complement(845..1147)
                     /locus_tag="VHN20_01650"
     CDS             complement(845..1147)
                     /locus_tag="VHN20_01650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724504.1"
                     /translation="MRHEPATIEDAIYAARGLSSELDHQIDIVAGLTGMTVDEVRDHV
                     LRHPPERPQRGASVVVGTSVVVVERRAARYSSRSVAGSPNSSPAPALRSRSLPLRP"
     gene            complement(1742..>2279)
                     /locus_tag="VHN20_01655"
     CDS             complement(1742..>2279)
                     /locus_tag="VHN20_01655"
                     /inference="COORDINATES: protein motif:HMM:NF012573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724505.1"
                     /translation="NLTLLGTGNFTGTGNAAANVLTGNAGANTLRGLAGNDRLLGVNG
                     NDFIDGGIGNDVIDGGIGNDRLTGGLGRDTLTGGLGRDIFDFNFVNESLRGALHDTVF
                     FARTQGDKIDLATIDADTDGTAGNQAFRFIGASAFHGVDGELRFAGGLLQGDTDGDRI
                     ADIEIRVIGALLRADIIL"
BASE COUNT          380 a          729 c          811 g          359 t
ORIGIN      
        1 gatgaccggg ttctcgtgcc gcaccgcttc gaacaggtcg agggcgtcgg gcaggagatc
       61 gagcgtgttg aagaaatccg gcgtcgcggc gagcctggcc cagaatttcc cgaggccgaa
      121 gcgacgttcg tagtcgcccg gcgccatccc gaacacgcgg gacgccccct tgtcgaaatc
      181 ggcgagcacg ccgtcgcaat cgaggaagat cgtggtcatg gaacgcgcag ggggttggag
      241 catgatccgg caaaagcctg cccccggact tgatccgggg ggtggccgcc gctttgccga
      301 cgaagatcat gcggcgcaaa gaaatggagc gggatcgatg caatctgaat cgaccatgat
      361 cgggcgggtg atcctgacgg gccacggtcg ccgccacggc tcggtgcatg ggagaatgcc
      421 gatcccgcac ttgcgctcga ggcttaccgc acgcggcggc cgagttgtcc gacctcgtcg
      481 cggctgagaa agcgcggtgc cgattcgatg agcatcaggg agccgtgatg atcatgcgcg
      541 agaagcagcc cttgccgccg cgacatgatc gtccgggctt cgcgctcgcc gagtcgcgcg
      601 cgcccatcgg cggaaacgat gcgggcaagg ggcattggct gctctcccgg gactgcgttg
      661 tgccgttaac ggcacttcgg gcgagtggtt gcgcgacagg atgactcatc ccgcgcggcc
      721 gtagcggggg agagaggcca gcctgccctg cggcgcggct tatctcgcgt gcatgcgaaa
      781 cgcggcgcgc gaacgcgccg ccgttccgga agcggctttc cgaaaacccc ggagggtgat
      841 gcgcttacgg ccgcagaggc agcgaccggc tgcgaagggc cggtgccggc gaagaattcg
      901 ggctgcccgc gacagaacgc gacgaatagc gcgcggcgcg gcgttccacg accaccacgg
      961 aggttcccac gacgacggaa gctccgcgct gcgggcgctc cggcgggtgg cgcagaacgt
     1021 gatctcgcac ttcgtcgacg gtcatcccgg tgagcccggc gacgatgtcg atctggtggt
     1081 ccagttcgga gctgaggccg cgcgccgcgt agatcgcatc ctcgatcgtc gcgggttcgt
     1141 gccgcacgcg cggcggggcg gacggcttcg ccggccggcg ctgagttctt tgcatcatga
     1201 ataagagagt agtgccgcgg cagcgctttg tgcactgcac aatacgcatg gctgcgccgc
     1261 gtctgtcgaa agcagatgtg cgcgtccccc cgggggtacg gccgcctggt cgtggcagcc
     1321 ggtgcggaac ggaaaacccc gccagcgtca gcgctgacgg gggttttggg attctgcctc
     1381 gtgccgtcag ccgccgatga cgcggtagat gacgaatccg ccgccgagga caaggatggg
     1441 aattccgaac cacaatatta gggcgggcat tgctctatac tccacacgcg ccgctctaaa
     1501 ccaaaaaccc gcggtggaat aagaaagttc cttgccgggc gcccctgatg cactgcacgg
     1561 cccgggcttt taaccatggc gccgaggctg cgcgcgcggt gcccaacctg ccgcccgatc
     1621 gaggctcgat cggagagggg ctcaagccgt ggcgccggcc gactggaagg cacccgtcac
     1681 ggcccggcgc gccttgccgc cgaggcggcc gcctttcgcg ggaaccgcgc ccgcaccgac
     1741 gtcacaggat gatgtcggcg cgcagcagcg cgccgatgac cctgatctcg atgtcggcga
     1801 tgcggtcgcc gtcggtgtcg ccctgcagga gcccgccggc gaagcgcaat tcgccgtcga
     1861 cgccgtggaa ggccgacgca ccgatgaagc ggaaggcctg gttgccggcg gtgccgtcgg
     1921 tgtcggcgtc gatcgtcgcg aggtcgatct tgtcgccttg cgtgcgcgcg aagaacaccg
     1981 tgtcgtgcaa ggccccgcgc agcgactcgt tgacgaagtt gaaatcgaag atgtcgcggc
     2041 cgaggccgcc ggtgagggtg tcgcgcccga ggccgccggt caggcgatcg ttgccgatgc
     2101 cgccgtcgat gacatcgttg ccaatgccgc cgtcgatgaa gtcgttgccg ttgacgccga
     2161 gcaatcgatc gttcccggca agcccgcgca gcgtgttggc gcccgcgttg ccggtaagaa
     2221 cgttggccgc cgcgttgccc gtgcccgtga aattgcccgt gccgagcagc gtcaggttt
//
LOCUS       DATAIQ010000096         2113 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_420463, whole genome shotgun sequence.
ACCESSION   DATAIQ010000096 DATAIQ010000000
VERSION     DATAIQ010000096.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2113)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2113)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2113
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_420463"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..689
                     /locus_tag="VHN20_01660"
     CDS             <1..689
                     /locus_tag="VHN20_01660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008838567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2724506.1"
                     /translation="DVSLNVRRGTIHALIGPNGAGKTTCFNLLTKFLTPSRGTIRYNG
                     RDITALRPADVARSGLVRSFQISAVFPHLSVLENVRIALQRKRGDSFDFWRSERVLRD
                     MDADARALIEAVGLAEFVATPAGELAYGRKRALELATTLALDPEMLLLDEPMAGMGHE
                     DVDRIAELIRRVSANRTILMVEHNLSVVASLSNWITVLARGRVLAEGDYATVSKDPRV
                     IEAYIGVGHA"
     gene            682..1428
                     /locus_tag="VHN20_01665"
     CDS             682..1428
                     /locus_tag="VHN20_01665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020091434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2724507.1"
                     /translation="MPEAALAQRTAPAVAAAPLLAVRGLQAWYGESHVLHGIDFDVAP
                     GEVVTLLGRNGAGKTTTLKSVIGILAKRTGSIAFEGRETIRLPSRHIARLGVGYVPEE
                     RGIFASLSVAENLELPPQVRPGGLSIEQIFELFPNLRERLTSQGTKLSGGEQQMLAIG
                     RILRTGARLLLLDEPTEGLAPVIVDQIGRTIARLKQEGFTIVLVEQNFRFASRVADRH
                     YVVEQGRVVDMIANADLERNVDKLHAYLGV"
     gene            1455..>2113
                     /locus_tag="VHN20_01670"
     CDS             1455..>2113
                     /locus_tag="VHN20_01670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012335229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX2724508.1"
                     /translation="MGLKQILLAGVFAAALGAAAQAQVSVKIGVLNDRSGVYSDISGE
                     GSVVAARMAVEDFKASEKGIKVDIVSADHQNKPDVGSNIARQWYDQDGVDLIVDVPTS
                     SVALAISQVTRDKNKVFINSGAAASDLTGAQCSPNTVHWTYDTVMLANGTGGAMVKQG
                     GDTWYFVTADYAFGHALERDTAAVVTKNGGKVVGAVRHPFPGQDFSSFLLQAQASKAK
                     V"
BASE COUNT          350 a          716 c          695 g          352 t
ORIGIN      
        1 acgatgtcag cctcaatgtc cgccgcggca cgatccatgc gctgatcggg ccgaacggtg
       61 ccggcaagac cacctgcttc aatctcctga ccaagttcct gaccccgagc cggggcacca
      121 tccgctacaa cggccgcgac atcacggcgc tgaggccggc cgacgtggcg cgcagcggcc
      181 tcgtgcgctc cttccagatt tcggccgtct tcccgcatct gagcgtgctc gagaacgtcc
      241 gcatcgcgct gcagcgcaag cgcggcgact cgttcgactt ctggcgctcc gagcgcgtcc
      301 tgcgcgacat ggacgccgat gcgcgggcgc tgatcgaggc cgtcggcctt gccgagttcg
      361 tcgccacgcc ggcgggcgag ctggcctatg ggcgcaagcg cgcgctcgag ctcgcgacca
      421 cgctggcgct cgatcccgag atgctgctgc tcgacgagcc gatggccggc atggggcacg
      481 aagatgtcga ccgcatcgcc gagctgatcc gccgggtctc ggccaaccgc accatcctga
      541 tggtcgagca caacctgtcg gttgtcgcgt cgctgtccaa ctggatcacg gtgcttgccc
      601 gcgggcgtgt cctcgccgag ggcgactatg cgaccgtctc gaaggacccc cgggtgatcg
      661 aggcctatat cggagttggc catgcctgag gccgcattgg cgcaacgcac cgcgcctgcc
      721 gttgccgcgg cgccgctcct ggcggtgcgc ggcctccagg cctggtacgg cgagtcccac
      781 gtcctgcacg ggatcgactt cgacgtggcg cccggcgagg tcgtgacgct gctcggccgc
      841 aacggcgccg gcaagacgac gacgctcaaa tcggtcatcg gcatcctggc caagcgcacg
      901 ggctcgatcg cgttcgaagg gagggagacg atccgcctgc cctcgcgtca catcgcgcgt
      961 ctgggcgtcg gctacgtccc cgaggagcgc ggcatcttcg cgagtctgtc ggtggcggaa
     1021 aacctggagc tgccgccgca ggtgcggccg ggagggctgt cgatcgagca gatcttcgag
     1081 ctcttcccca acctgcgcga gcgcctgacc agccagggaa cgaagctctc cgggggcgag
     1141 cagcagatgc tggccatcgg ccgcatcctg cgcaccggcg cgcgcctcct gcttctcgac
     1201 gagccgaccg aggggctggc ccccgtgatc gtcgaccaga tcgggcgcac gatcgcacgt
     1261 ctgaagcagg agggatttac catcgtgcta gtcgagcaga acttccgctt tgcgtcgcgg
     1321 gttgccgacc ggcactatgt cgtcgagcag ggtcgggtcg ttgacatgat cgccaatgcc
     1381 gaccttgaaa gaaacgtcga caagcttcac gcctatctcg gcgtgtgaat cataacatca
     1441 acaggaggaa ttccatgggc ttgaaacaaa tcctactcgc cggcgttttc gcggcggccc
     1501 tgggcgccgc cgcccaggcg caggtatcgg ttaagatcgg cgtcctcaac gaccgctccg
     1561 gcgtctattc ggacatttcc ggcgaaggct cggtggtggc cgcccgcatg gccgtcgagg
     1621 acttcaaggc gtccgagaag ggcatcaagg tcgacatcgt ctcggccgat catcagaaca
     1681 agccggacgt cggctcgaat atcgcgcgtc agtggtacga ccaggacggc gtcgacctga
     1741 tcgtcgacgt gccgacctcg tcggtggcgc tcgccatcag ccaggtgacg cgcgacaaga
     1801 acaaggtctt catcaattcc ggcgccgccg cctcggatct cacgggcgcg caatgctccc
     1861 cgaacaccgt gcactggacc tacgacaccg tgatgctggc caacggcacc ggcggcgcga
     1921 tggtcaagca gggtggcgac acctggtatt tcgtgaccgc cgattacgcc ttcggccatg
     1981 cgctcgagcg cgacacggcg gcggtcgtga ccaagaatgg cggcaaggtg gtgggcgccg
     2041 tcaggcatcc gttcccgggc caggatttct cgtccttcct gcttcaggcg caggcctcca
     2101 aggcgaaggt gat
//
LOCUS       DATAIQ010000097         4170 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_325428, whole genome shotgun sequence.
ACCESSION   DATAIQ010000097 DATAIQ010000000
VERSION     DATAIQ010000097.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4170)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4170)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4170
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_325428"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1468
                     /locus_tag="VHN20_01675"
     CDS             <1..1468
                     /locus_tag="VHN20_01675"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX2724509.1"
                     /translation="PERLSPQSFFLRAIQSQPTEGTFTVRSELDGVERQIGYRKVPGY
                     PLYVQAGIETSAIRRELTSAMLAHLAFGLPASLAIFALAVYALRRTERFEAEVVRREI
                     AEAALKQAQRLEAVGQLTGGVAHDFNNLLMVVSGNVERLRRYPVADERQRKALDAIDA
                     AARRGTGLTRQLLSFSRRQAHEPTATDLRRHFPQLEDMLRSSLRGDIAIEIRVADDLW
                     PVKVDLSEFELAALNVAVNARDAMSNGGRLTIAAQNVRLSDTATIGLKGDFVALSFSD
                     TGAGIPPDVLTRVFEPFFTTKEVGKGTGLGLSQVYGFARQSGGTATIASQPGRGTTVT
                     LYLPRTKEQPEAKDAPPPEAPPRRSEDRGRVLVVEDNIDVAEVTKSHLEELGYRVIHA
                     TDAAAAIRMLGQEHNDIDLVFSDIVMPGNLNGLDFVRAVRKEYGTKLPVLLATGYSDV
                     AQAAADEGFPILRKPFDMRQLREGVATAIRSTRLKLVG"
     gene            1646..1873
                     /locus_tag="VHN20_01680"
     CDS             1646..1873
                     /locus_tag="VHN20_01680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020188118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724510.1"
                     /translation="MESTRLAERELASGRLVMPLTRTSVPIRYVGHNLVFPRYVRQRQ
                     ALKVFTDWLLAELALKAQSPPGNSADAPRAA"
     gene            2019..2897
                     /locus_tag="VHN20_01685"
     CDS             2019..2897
                     /locus_tag="VHN20_01685"
                     /inference="COORDINATES: protein motif:HMM:NF013134.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD binding domain-containing protein"
                     /protein_id="HEX2724511.1"
                     /translation="MKPAAFVHHEPRTLEEATSLLAEVGPDDGRVLAGGQSLVPAMAL
                     RLARPAHLVDINRIDELTRLGFSDGVLSIGACVRHAAFHKPSGPGPLERLLSAVVRHI
                     AHYPIRTRGTFCGSLANADPASEWCLVAVTLDAALVADSRRGRRTIAAADFFQGIMTT
                     ALQADELLVETRLRLLATETRFGFYEFSRRAGDFAQAMTLAAFELAEGVIASPRVGVG
                     AVEAAPRRLGIVEDFLAGREPSQRTFEAAAELARGDVDPTEETTDGVDYKRDLVRATT
                     LRALEQAASGPLHAAN"
     gene            3036..4004
                     /locus_tag="VHN20_01690"
     CDS             3036..4004
                     /locus_tag="VHN20_01690"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEX2724512.1"
                     /translation="MRIPGVKGLVIAAALAITATAAYAQEYPNKPVRLILPYAPGGII
                     DYVGRTLAQRLGENMGHPVVAENRPGAGGIAGTDYVAKSPADGYTILLMDPAVVINPT
                     LQPSIPYDLFKELKTVSVVSSSPEVVVVSPSLPVRTFKELIDYGKANPGKLNFASAGV
                     GTTPHLAGELFKLRAGVDATHIPYKGIGASFTDIMSGKVQFAFSSIAGAQPFTSDNRV
                     RAIATTGPKRTSAYPDLPTVSEAGLPGFEVDLWLGIFVPAATPPNVVARLNAELKKAL
                     DNPDTKAALAKVGVEPRGTSPEEGLQFIRNEYETWRKVIGDAKIQL"
BASE COUNT          706 a         1425 c         1346 g          693 t
ORIGIN      
        1 tcccgagcgt ctgagcccgc aaagcttctt tctgcgcgcc atccaaagcc agccgacgga
       61 gggcaccttc accgtccggt cggaactcga cggcgtcgag cggcagatcg gctatcgcaa
      121 ggtgccgggc tatccgctct acgtccaggc agggattgaa acgtccgcga tcaggcgcga
      181 gctgacgagc gccatgcttg cccacctcgc attcggcctt ccggcgagcc tcgccatatt
      241 cgcgctcgcc gtctacgcgc tgcggcgcac cgaacgcttc gaggccgaag tcgtgcggcg
      301 tgagattgcc gaggctgcct tgaagcaggc acaacgtctc gaggcggtcg gccagctgac
      361 gggcggcgtt gcgcatgact tcaacaacct cctcatggtg gtcagcggca acgtcgagcg
      421 cttgcgccgc tacccggttg ccgacgagcg ccagcgcaag gcgcttgacg cgatcgatgc
      481 cgccgcccgg cgtggcaccg gcctgacgcg gcaacttctc tcgttctctc ggcggcaggc
      541 gcacgagccc accgcgaccg atttgcgccg gcactttccg cagctcgagg atatgctgcg
      601 atccagcctg cggggcgaca tcgcgatcga aatcagggtc gcggacgacc tctggcccgt
      661 caaggttgat ctgagcgagt tcgagctcgc ggccctgaac gtcgcggtca atgcgcgcga
      721 cgcaatgtcg aatggcggcc gcctgaccat cgcagcgcag aacgttcgct tgagcgacac
      781 cgccacgatc ggcctcaaag gcgactttgt cgccctgagc ttcagcgaca ccggcgccgg
      841 catcccgccg gacgtgctga cgcgcgtttt cgaaccattc ttcacgacca aggaagtcgg
      901 gaaaggcacc ggcctgggcc ttagccaggt gtatggcttt gcccgtcagt caggtggcac
      961 ggcaacgatc gccagccaac ctggccgcgg cacgacggtg acgctttacc tcccgcgcac
     1021 gaaggagcag cccgaggcga aggatgcgcc gccgccggag gcgccgccgc gccgtagcga
     1081 ggacagaggc cgcgtcctcg tcgtcgaaga caacatcgat gtcgccgagg tgaccaaaag
     1141 ccatctggag gaactcggct acagggtcat tcacgcgacc gacgcggcag cggcgatcag
     1201 gatgctcggc caagagcaca acgacatcga tctggtgttc agcgatatcg tcatgcccgg
     1261 caatctcaac ggcctcgact tcgtgcgcgc tgttcgcaag gaatatggga cgaagcttcc
     1321 cgtgctgctt gcgacaggct acagcgacgt cgcccaggcc gccgccgatg agggctttcc
     1381 gattctgcgc aagcccttcg acatgcgcca gctgcgcgaa ggcgtcgcca ctgccatccg
     1441 ctcgacgcgc ctcaagctcg tcggctgaag gcatgatccg gcgaagtgga caccacttcg
     1501 ccgaaagaga cgatgcgatt gaaattgctc agaagcggat ggtcagggcc gggatgtagc
     1561 tgatcgcggc cagcagggcg agcgcgacga agaagaacgg ccacaaggct ttcgtcgtct
     1621 ctcccatcgt gctgccggcg tcgccttgga gtcgacgcgc cttgcggagc gggagctcgc
     1681 atccggccgc ctcgtgatgc cgctgacgcg gacttcggtc ccgatccgct atgtcggcca
     1741 caacctggta tttccgcgct acgtgcgcca gcggcaagcg ctcaaggtct ttacggactg
     1801 gcttctggcg gagctcgcac tcaaggcgca gagcccaccc ggcaactcgg ccgatgcgcc
     1861 tcgcgcggca tgaatgccgt cccgaccaga cgaactccgg aatgaagagt gcgcgggtgg
     1921 tttacgaagc cgcatcgatc gggcatcagt agcgccgacc cgccccacct gcgccgctcg
     1981 gctgacaatg cacgaccggc gcgccgacca gacgtcgcat gaagcctgcc gcattcgtcc
     2041 atcacgagcc gcgcaccctg gaggaggcca cctcgctcct ggcggaggtg gggcccgacg
     2101 atggtcgcgt gcttgccggc gggcaaagcc ttgttccggc gatggccctg cgtctggcgc
     2161 gccccgcgca tctagtcgac atcaaccgca tcgacgaact gacccggctc ggtttcagcg
     2221 atggtgtcct ttcgatcgga gcttgcgtcc gccacgccgc gttccacaag ccgtcgggac
     2281 cgggtcccct cgagcggctg ttgagcgccg tcgtgcgcca catcgcgcat tatcccatcc
     2341 gcacgcgtgg cacgttttgc ggcagcctcg ccaatgcgga cccggcttcc gagtggtgcc
     2401 tcgtggcggt gacgctcgat gctgccctcg tcgctgacag ccgccgcggg cggcgcacca
     2461 tcgcggccgc ggacttcttc cagggaatca tgaccactgc gctgcaggct gacgagcttc
     2521 tggtcgaaac gcgcctgcgt ctgctggcta cggagacgcg gttcgggttc tacgagttca
     2581 gccggcgcgc cggtgatttc gcgcaagcca tgacgcttgc cgcgttcgag ctggccgagg
     2641 gcgtgatcgc cagcccgcgg gtcggcgtcg gtgccgttga ggcggcgccg cgtcgtctgg
     2701 ggattgtgga ggattttctc gccggccgcg agccgtcgca acggacgttc gaggccgccg
     2761 ccgagctcgc tcgcggcgac gtcgatccga ccgaggaaac caccgacggt gtggactaca
     2821 agcgcgacct cgtccgcgcc acgaccctgc gggcgctcga gcaggcggcc tccggcccgc
     2881 ttcacgccgc aaattgacag gcggtcgacc ttgcgtgcag gttctgcgga acggccgctc
     2941 gttcgctcgc gtgacctgac aatccggttg tcctgagacg gaatcgatcg gcacgattga
     3001 acgaacgcaa tgtgcaattc gggagaggaa agtcgatgag gatacccggt gtcaaaggtc
     3061 tcgtgatcgc tgctgcattg gccatcaccg cgacggccgc gtatgctcag gagtatccga
     3121 acaagccggt ccgactcatt cttccttacg cgccgggcgg gatcatcgac tatgtgggcc
     3181 gcaccctcgc gcagcgcctc ggcgagaata tggggcaccc ggtggtcgcc gaaaaccggc
     3241 ccggggcggg cggcatcgcc ggcaccgact acgtcgccaa gtcgcccgcc gacggctaca
     3301 cgattctcct gatggacccg gcggtcgtga tcaacccgac gctgcagccg agcattccct
     3361 acgacctgtt caaggagctc aagaccgttt ctgtcgtcag ctcctcgccc gaggtcgtgg
     3421 tcgtgtcgcc atcgcttccg gtgcgcacgt tcaaggagct gatcgattac ggcaaggcca
     3481 atcccggcaa gctgaacttc gcgtccgccg gcgtcggcac cacgccgcac cttgccggcg
     3541 agctgttcaa gctgcgcgcc ggcgtcgacg cgacccacat tccctacaag ggcatcggcg
     3601 cctccttcac cgacatcatg tccggcaagg tgcagttcgc cttcagcagc attgcgggcg
     3661 cgcagccatt cacgtccgac aaccgcgtgc gcgccatcgc cacgaccggt cccaagcgca
     3721 cgtccgccta tccggatctg ccgacggtga gcgaggcggg cctgccgggc ttcgaggtcg
     3781 atctgtggct gggcatcttc gtgccggccg cgacgccgcc gaacgtggtc gcgcgcctga
     3841 acgccgaatt gaagaaggcg ctcgacaatc cggatacgaa agccgcgctc gcgaaggtcg
     3901 gcgtcgagcc gcgcggaacc agccccgagg aggggctgca gttcatccgc aacgagtacg
     3961 aaacctggcg aaaggtgatc ggcgacgcca agatccagtt gtgatccgtt gacggcattc
     4021 accagcgcgg cggtcagcgg ccccaaccgc cgggccgcct tcatcgtgag cggcgcctct
     4081 ccggcggcgc gttcggcttc ggaaaacccg ttgtgacctc atgattcgcg ctcccaagga
     4141 cttctggtcc ggcgtgctgt gcgtcgccct
//
LOCUS       DATAIQ010000098         2648 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_48439, whole genome shotgun sequence.
ACCESSION   DATAIQ010000098 DATAIQ010000000
VERSION     DATAIQ010000098.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2648)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2648)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2648
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_48439"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..468
                     /locus_tag="VHN20_01695"
     CDS             <1..468
                     /locus_tag="VHN20_01695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018260290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HEX2724513.1"
                     /translation="PRFGIDGLPEETVQELNLAWRRLPAWPEVPDALARLKRCFVLAP
                     VSNGNISLMVGLARHAGFPWDTILGSEIAGDYKPKPRVYLAAVEALDLAPHECMMVAA
                     HSYDLAAAAACGLRTGHVARPDEKGPGTGERAPTVPVDIAASDLTDLARRFGV"
     gene            597..914
                     /gene="sugE"
                     /locus_tag="VHN20_01700"
     CDS             597..914
                     /gene="sugE"
                     /locus_tag="VHN20_01700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011580322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="quaternary ammonium compound efflux SMR
                     transporter SugE"
                     /protein_id="HEX2724514.1"
                     /translation="MAWLILVAAGLFEIGWAVGLKYTEGFTRPWPTIATVAAMIISVA
                     LLGLALRTLPLGTGYAVWTGIGTIGTAVLGIVLFGEATDPMRLACIGLIAAGIVGLKL
                     VTP"
     gene            complement(921..1841)
                     /gene="miaA"
                     /locus_tag="VHN20_01705"
     CDS             complement(921..1841)
                     /gene="miaA"
                     /locus_tag="VHN20_01705"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012335835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0052381 - tRNA dimethylallyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HEX2724515.1"
                     /translation="MAGSGRVVLIAGPTASGKSALALALAKARGGDIVNTDSMQVYRD
                     LRVLTARPSPEEEQGAPHRLYGHVDGGLNYSVGRYLDDAARLVGDAGSREKDLIFVGG
                     TGLYFKALLEGLSDVPPVPQAIRDAVRAESEGRTAPELHAELARRDPRSAGALAPNDR
                     LRILRALEVLAATGQPLASFRGRKQPGPLAASDPVRFFLAPDRDWLRARIEARFAAMI
                     GQGALDEVRALGERRLDPALPVMRAHGVPALLAHLRGEITRDEAIAQGQADTRRYAKR
                     QFTWFRHQMPGWTWVAPDAAEAALRETFSA"
     gene            1879..>2648
                     /gene="serB"
                     /locus_tag="VHN20_01710"
     CDS             1879..>2648
                     /gene="serB"
                     /locus_tag="VHN20_01710"
                     /EC_number="3.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018263561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0036424 - L-phosphoserine phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine phosphatase SerB"
                     /protein_id="HEX2724516.1"
                     /translation="MSHVATLISSPRRPAVADKVVRAAADVLETAAKPVWLHETVAAD
                     LFFEPRGAGPDRLAASLRQALDGAPVDVVIQPARGRRKRLFLADMDSTMIEQECIDEL
                     ADYVGLKTEVSAITERAMRGEIAFEPALRKRVALLKDLPVGVVDEIIAKRISLMPGGR
                     TLVGTMRAHGAYTCLVSGGFTVFTGPLAAHIGFHEHRSNALVVSSERLAGRVEEPILG
                     REAKIATLIELRERLGLCHEDTLAVGDGANDLAMLGEAG"
BASE COUNT          380 a          952 c          933 g          383 t
ORIGIN      
        1 ccgcgcttcg gcatcgacgg ccttcccgag gagacggtgc aggagctgaa cctggcttgg
       61 cgccggctcc cggcctggcc ggaggtgccc gacgcgctgg cccggctcaa gcgctgcttc
      121 gtgctggccc cggtctcgaa cggcaacatc tcgctgatgg tcggcttggc gcgccacgcc
      181 ggctttccgt gggacacgat cctgggctcg gagatcgcgg gcgactacaa gccgaagccc
      241 cgggtctatc tggcggcggt cgaggcgctc gaccttgcgc cgcacgaatg catgatggtg
      301 gcggcgcaca gctacgatct cgcggcggcc gcggcctgcg gcctccgcac cggccacgtg
      361 gcgcgccccg acgagaaagg ccccggcacc ggcgagcgcg cgccgacggt gccggtcgac
      421 atcgcggcga gcgacctcac cgacctcgct aggcggttcg gcgtgtaacg gcccttgacg
      481 gcggcgacgc cgcccatatg tgaaaccggc gcgatgtgaa accggcgcgc gaggacgacc
      541 tcgcagcctt cccgacaatc caaaggggac ggcccctttc atccacggag gtggaagtgg
      601 cttggctcat cctcgtcgcc gccggcctgt tcgaaatcgg ctgggccgtc gggctgaaat
      661 acacggaagg cttcacgcgc ccctggccca caatcgccac cgtcgctgcc atgatcatca
      721 gcgtcgcgct gctggggctg gcgctccgga ccctgccgct cggcaccggt tatgccgtct
      781 ggaccgggat cgggaccatc ggcacggccg tcctcggaat cgtgctgttc ggcgaggcga
      841 ccgacccgat gcgcctcgcc tgcatcggcc tgatcgccgc cggcatcgtc ggcctgaagc
      901 tggtgacgcc ttgatctcgt tcaggcggaa aaagtttctc gcagcgccgc ctccgcggca
      961 tccggcgcca cccaggtcca gcccggcatc tggtggcgga accaggtgaa ctgccgcttg
     1021 gcgtagcggc gcgtgtcggc ctggccctgc gcgatcgcct cgtcgcgggt gatctcgccg
     1081 cgcagatgcg cgagcagcgc cggcacgccg tgggcgcgca tgacgggcag ggccgggtcg
     1141 agccgccgct cgccgagcgc cctcacctcg tcgagagcgc cctgcccgat catcgctgcg
     1201 aagcgcgcct cgatgcgcgc ccgcagccag tcgcggtccg gcgcgagaaa gaacctgacc
     1261 ggatcgcttg ccgccagcgg cccaggctgc ttgcggcccc ggaaagaagc gagcggctgg
     1321 ccggtcgcgg ccagcacctc gagcgcgcgc aggatccgca ggcggtcgtt cggcgccagc
     1381 gccccggcgc tccgcgggtc gcgccgcgcg agctcggcat gaagctcggg cgcggtgcgg
     1441 ccctcgctct cggcgcggac ggcgtcgcgg atcgcctgcg gcaccggcgg cacgtcggag
     1501 aggccttcga gcagcgcctt gaagtagagc cccgtgccgc cgacgaagat cagatccttc
     1561 tcgcgcgacc ctgcatcgcc gacgaggcgg gcggcgtcgt cgagatagcg ccccaccgaa
     1621 tagttgaggc cgccgtcgac atggccgtaa aggcggtgcg gcgcgccctg ctcctcctcc
     1681 gggctcggac gcgccgtgag gacgcgcagg tcgcggtaaa cctgcatcga atccgtgttg
     1741 acgatgtcgc cgccgcgcgc ctttgccagg gcgagggcga gcgccgactt gcctgaggct
     1801 gtcggccctg cgatgaggac gacccgacct gatcctgcca tggcgacttt gacgattcca
     1861 agcgagagcg aagctagcgt gagccacgtc gcgacactga tttcaagccc gcgccgcccg
     1921 gccgttgccg acaaggtcgt gcgcgcagct gccgacgtgc tggagaccgc ggcaaagccc
     1981 gtgtggctgc atgagacggt tgccgccgac ctgttcttcg agccgcgcgg cgccgggccc
     2041 gaccggctgg ccgcgagcct gcgccaggcg ctcgacgggg cgcctgtcga cgtcgtcatc
     2101 cagcccgcgc gcggccgccg caagcgcctg ttcctcgcag acatggattc gaccatgatc
     2161 gagcaggaat gcatcgacga gctggccgac tatgtcgggc tcaagacaga ggtctcggcc
     2221 atcaccgaac gggcgatgcg cggcgagatc gccttcgagc cggccctgcg caagcgcgtg
     2281 gcgctgctca aggacctgcc ggtcggggtg gtcgacgaga tcatcgccaa gcgcatcagc
     2341 ctgatgccgg gcggccggac gctggtcggc acgatgcgcg cgcacggagc ttatacctgc
     2401 ctcgtctccg gcggcttcac ggtgttcacg gggccgctcg cggcccacat cggctttcac
     2461 gagcatcgct cgaacgccct ggtggtctcg agcgagcgcc tcgccggccg cgtcgaggag
     2521 ccgatcctcg gccgcgaagc caagatcgcc accttgatcg agctgcgcga gcggctcggg
     2581 ctgtgccatg aggacaccct ggcggtcggc gacggcgcca acgacctcgc catgctcggc
     2641 gaggccgg
//
LOCUS       DATAIQ010000099         4390 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_5464, whole genome shotgun sequence.
ACCESSION   DATAIQ010000099 DATAIQ010000000
VERSION     DATAIQ010000099.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4390)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4390)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4390
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5464"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1280
                     /locus_tag="VHN20_01715"
     CDS             <1..1280
                     /locus_tag="VHN20_01715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018388905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX2724517.1"
                     /translation="GAATPAAAQTGKVTVVTSFAKDVTDPFKKAFEKAHPGTTLEVQN
                     RNTNAAVKFIEETKGNNQTDLMWASAPDAFEVLKSKGLLQKYAPKPAGIPDKIGAFPM
                     NDPQGHYFGFAASGYGIMWNTRYAQANKLPEPKEWQDLAKPAYFDHVSIAAPSRSGTT
                     HLTIETILQGEGWDKGWRTIKEMAGNFRQVTERSFGVPEAVNSGQVGFGVVIDFFAFS
                     AQASGFPVKFVYPSVTTIVPANVGIVANAPNRAAAEAFVEFLVSPAGQEVLLEPSIRR
                     LPINPAVYAKAPADYPNPFKDPSLGARVKFDVDVSEKRTNVVDTLFDQIITFQLEALK
                     GATKAIHDVEAALAKKDNAQARTLVKEARDLVAAMPVTEAQAPAPEIAGAFTGAKEKG
                     ARQAELEQQWAAFARERYAQARAKAEEAQKLAR"
     gene            1329..3035
                     /locus_tag="VHN20_01720"
     CDS             1329..3035
                     /locus_tag="VHN20_01720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018388904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HEX2724518.1"
                     /translation="MAFALPRPAARAAFPTGEAAVAILAALFLLLFLIVPVATVIYVA
                     FTERGTGAFTLVNFADFARTDLFMRSLWNSLYVSAMTVVFASLLALPLAYLTTRFEFR
                     GAVVVQTLGFLPLIMPPFVGAVAMQLLFGRNGTVNLVLDEWLGIKIPFMEGLNGVIFV
                     EALHYFPFILINLSTALRNIDGAMEEAAQNLGCSGFRLFRRIVFPLAMPGYIAGASLV
                     FVKVFDDLATPLLLNVKDMLAPQAYLRVTSIGLADPMGYVISVVLIVGSILAMWISAR
                     ALRGKDYATVQRGGGGLSRRAMNPWESALSQAVVVLILLLVLAPHIGLALLSFATVWS
                     FSPLPDAYTLAHYSRVFGDSFVYIKNTLLYASLAGLIDVVVGTAIAYLVLRTRLVGRE
                     WLDWAASAALAIPGVVLGIGYLRTFYGVTLPDGRPLATLWVTIVLALAIRRLPYALRA
                     CYAALQQISVSLEEAAENLGASRTRTIRRIVVPLMTGGILAGFVSSFATAAVELSATL
                     MLVQSNSDAPLAYGLYVFMQSAAGRGPGAALGVIAVVLVAVCALVSHLAVERSQRRQE
                     RT"
     gene            3032..4126
                     /locus_tag="VHN20_01725"
     CDS             3032..4126
                     /locus_tag="VHN20_01725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009339486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2724519.1"
                     /translation="MNPPLRPGDLATDACGVRIDAVNMFYGANHVLKDVNLDIRPGEF
                     FAFLGPSGCGKTTLLRAIAGFAQPQTGRVLIGDDDVSRLPPWKRDVGLVFQSYALWPH
                     LTVRRNVAFGLEERKVPRRDIARRVAAALDLVGMAAFAERLPSQLSGGQQQRVAVART
                     VAIEPKVLLLDEPLSNLDARLRVQVRRELRDLQRRLGITAIFVTHDQEEANTMCDRIA
                     VMSDGVVQQVGTPIELYEHPANLFVASFLGTANILEGEVVGSGTERAFVTGGIRVPVS
                     SAAIIPAGARMVFRPQDTRIGPDERGTTTVPGTIGHREFLGSTVRYGVRVGATEIAVD
                     TPFHSGDPLHESGAQVTVAVPSRSLLWLLP"
     gene            complement(4185..>4390)
                     /locus_tag="VHN20_01730"
     CDS             complement(4185..>4390)
                     /locus_tag="VHN20_01730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015929490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HEX2724520.1"
                     /translation="AETPAVAVYNATRADQHVEGGTAATLAAQVAQTTAAGPAIVLVG
                     QTLAEVVPSATTQDAAVRRRARA"
BASE COUNT          663 a         1573 c         1379 g          775 t
ORIGIN      
        1 tcggcgcagc aacgccggcg gccgcccaga ccggcaaggt gacggtcgtg acgtccttcg
       61 ccaaggacgt caccgacccc ttcaagaagg ccttcgagaa agcccatccg ggcacgaccc
      121 tggaggttca gaaccgcaac acgaacgcgg ccgtgaagtt catcgaggaa accaagggca
      181 acaaccagac cgacctcatg tgggcctccg cgccggacgc cttcgaggtg ctgaagagca
      241 aaggcctcct tcaaaaatac gcgccgaagc cggccgggat ccccgacaag atcggcgcct
      301 ttcccatgaa cgatccgcag ggccattatt tcggcttcgc cgcctccggc tacggcatca
      361 tgtggaacac acgctacgcg caggccaaca agctgcccga accgaaggag tggcaggatc
      421 tcgccaagcc ggcctatttc gatcacgtct cgatcgcggc gccgtcccgc tcgggcacga
      481 cccatctcac catcgagacg attcttcagg gtgaaggctg ggacaagggc tggcgcacca
      541 tcaaggagat ggccggcaac ttccgccagg tcacggagcg cagcttcggc gtgcccgaag
      601 ccgtcaattc cggccaggtc gggttcggcg tcgtcatcga cttcttcgcc ttctcggcgc
      661 aggcgtccgg cttcccggtg aagttcgtct atccctcggt gacgacgatc gtgccggcca
      721 atgtcggcat cgtcgccaat gcgccgaacc gtgccgccgc cgaggcgttc gtcgagtttc
      781 tcgtctcgcc cgcaggccag gaagtgctgc tcgagccgag catccgtcgc ctgccgatca
      841 accccgcggt ttacgccaag gcgccggcgg attaccccaa tccgttcaag gacccgtcgc
      901 tcggcgcacg cgtgaaattc gacgtggacg tctcggagaa gcgcaccaac gtcgtcgaca
      961 cgctcttcga tcagatcatc acgtttcagc tcgaagcgct gaagggcgcc acgaaagcga
     1021 tccatgacgt cgaggccgcg ctcgccaaga aggacaacgc tcaggcgcgc accctcgtga
     1081 aggaagcgcg cgatctcgtc gctgccatgc cggtgaccga ggcgcaggcg cccgcgcccg
     1141 agatcgccgg cgccttcacc ggcgccaagg agaagggcgc gcgccaggcc gagctcgagc
     1201 agcaatgggc cgcgttcgcg cgcgagcgct acgcacaggc gcgcgccaag gcggaagagg
     1261 cgcagaagct tgcccgttga tggaaggcgg gcaggcgctg cctgcccgcg cccataaaac
     1321 ccgttcacat ggcatttgcc ctcccccgtc ccgcagcccg cgccgcgttt ccgaccggcg
     1381 aggccgcggt tgcgatcctg gccgcgctgt tcctgctgct gttcctgatc gttccggtgg
     1441 cgacggtgat ctacgtcgcc ttcaccgagc gcggcacggg cgccttcacg ctcgtcaact
     1501 tcgccgattt cgcacgcacc gacctgttca tgcggtcgtt gtggaactcg ctctacgtat
     1561 cggccatgac ggtcgtcttc gcctccctgc tggcgctacc gctcgcctac cttaccaccc
     1621 gcttcgagtt tcgtggcgcc gtcgtcgtgc agacgctcgg cttcctgccg ctgatcatgc
     1681 cgccattcgt cggcgcggtt gccatgcagc tcctgttcgg ccgcaatggc accgtcaacc
     1741 ttgtgctcga cgagtggctc ggcatcaaga ttccgttcat ggaggggctc aatggggtca
     1801 tcttcgtcga ggcgctccac tatttcccgt tcatcctgat caatctctcg acggctttgc
     1861 gcaacatcga cggggccatg gaggaggcgg cgcagaacct cggctgcagc ggtttccgcc
     1921 tcttccggcg catcgtcttc ccgctcgcca tgccgggcta catcgccggc gcctcactgg
     1981 ttttcgtaaa agtgttcgac gacctcgcca cgccgctcct cctcaacgtc aaggacatgc
     2041 tggcgccgca ggcgtatttg cgcgtgacgt cgatcgggct cgccgatccg atgggttatg
     2101 tcatctccgt cgtccttatc gtcggctcga tcctggccat gtggatttcg gcccgggccc
     2161 tgcgtggcaa ggactacgcg accgtccaac gcggcggcgg cgggctttcc cgccgcgcca
     2221 tgaacccttg ggaaagcgcg ctctcgcagg cggtggtcgt cctgatcctg ctgctcgtgc
     2281 tggcgccgca tatcggcctg gcgctgctct cgttcgcgac ggtctggtcg ttcagccccc
     2341 tgcccgacgc ctacacgcta gcgcattaca gccgcgtgtt cggcgacagc ttcgtctaca
     2401 tcaagaacac gttgctttat gcctcgctcg ccggcctcat cgacgtcgtg gtcgggacgg
     2461 ccatcgccta cctcgtcctg cgcacgcgtc tggtcggccg cgaatggctc gactgggcgg
     2521 cgagcgccgc cctcgccatt ccaggcgtgg tgctcggcat cggttatctg cgcacgttct
     2581 acggcgtgac gctgcccgac ggtcgccctc tcgccacgct ttgggtcacg atcgtgctgg
     2641 cattggcgat ccggcggcta ccttacgcgt tgcgcgcctg ttacgccgcc ctgcagcaga
     2701 tctcggtatc gctggaggaa gcggccgaga atctcggcgc cagcaggacc cgcaccatcc
     2761 ggcgcatcgt cgtgcccctg atgacgggcg gcatcctggc cggcttcgtg tcgagcttcg
     2821 cgaccgcagc cgtggagctt tccgcaacgc tcatgctcgt gcagtcgaac tcggacgcgc
     2881 cgctcgccta cggcctctac gtgttcatgc agtcggccgc cgggcgcggc cccggcgccg
     2941 ctctcggcgt catcgccgtc gtgctggtgg cggtctgcgc cctcgtgtcc catctcgccg
     3001 tcgaacgcag ccaacggcgg caggaacgca catgaacccg cctctccgcc ccggcgacct
     3061 cgccacggat gcgtgcggcg tccgcatcga cgccgtgaat atgttctacg gcgcgaacca
     3121 cgtcctcaag gacgtgaatc tcgacatcag gccgggcgag ttcttcgcct tcctcggccc
     3181 gtccggctgc ggaaagacga cgctcctgcg ggccatcgcg ggtttcgccc agccgcagac
     3241 cggacgcgtg ctgatcggcg acgacgacgt ctcgcgcctg ccgccatgga agcgcgacgt
     3301 cggcctggtc ttccagtcgt acgccctgtg gccgcatctg accgtgcgcc gcaacgtggc
     3361 cttcggcctc gaggagcgca aggtgccgcg ccgcgacatc gcgcgccgcg ttgccgcggc
     3421 gctcgacctc gtcggcatgg ccgcttttgc cgaacgcctg ccgtcgcaac tgtcgggcgg
     3481 ccagcagcag cgcgtcgccg tcgcgcgtac cgttgcgatc gagcccaagg tgcttctcct
     3541 cgacgagccg ctctcaaatc tcgacgccag gctgcgcgtc caggtgcgcc gcgagttgcg
     3601 cgacctgcag cgccgcctcg ggatcacggc cattttcgtg acccacgatc aggaagaggc
     3661 gaacaccatg tgcgaccgca tcgccgtcat gagcgacggg gtcgtgcagc aggtcggcac
     3721 gcccatcgag ctctacgaac atccggccaa tctcttcgtg gcgagctttc tcggcacggc
     3781 caacatcctc gaaggcgagg tggtcgggtc gggcacggag cgcgccttcg taaccggcgg
     3841 catccgcgtg cctgtttcat cggcggccat aatccccgcc ggcgcccgga tggtgttccg
     3901 gccgcaggac acccgcatcg gccccgacga gcgcggtacg acgactgtgc cgggcacgat
     3961 cggccaccgc gagttcctcg gctcgaccgt ccgctacggc gtgcgggtag gcgcaacgga
     4021 gattgccgtc gacacgccgt tccacagcgg cgatccactg cacgagagcg gcgcgcaagt
     4081 gaccgtcgcc gtgccctcgc gctctctcct ctggctcttg ccctgagatc ggttgagagc
     4141 cgggcggaac gaccatcagg atcctcgttg cgcctcgcga agggtcaggc gcgcgcgcgg
     4201 cgccgcacag ccgcatcctg tgtcgtcgcg ctcggcacca cctcggcaag cgtttgaccg
     4261 acgaggacga tcgccgggcc ggctgcggtc gtctgcgcga cctgcgcggc aagggtcgcg
     4321 gcggtgcccc cttccacgtg ctgatcggct cgcgtcgcgt tgtagacggc gaccgccggc
     4381 gtttccgccg
//
LOCUS       DATAIQ010000100         2391 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_5488, whole genome shotgun sequence.
ACCESSION   DATAIQ010000100 DATAIQ010000000
VERSION     DATAIQ010000100.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2391)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2391)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2391
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5488"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1474)
                     /locus_tag="VHN20_01735"
     CDS             complement(<1..1474)
                     /locus_tag="VHN20_01735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006613550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CheR family methyltransferase"
                     /protein_id="HEX2724521.1"
                     /translation="MNRRACAPLLSLTRHARVAALPDREDRRGRVPVVSSYNSNKRGR
                     PAKEKSAAEGAHQPGTPVVIGIGASAAVAQSLASLLGKLSAAPDQAIVMVLQQREALD
                     ERPLFEAIARRGGKLAPIEGGKPLEGGCIYLSPANAIVTVENGRFRIHSAEEPPGSRG
                     TIDSFLVSLAEDQGESALGVILYGTAGDGTLGLATIKEGGGLTIAEQGPDEHLSEPSA
                     GNLPGALADFVVPLDAIPERIAIYGRHLARLRERKTLDETLAEVSGALAQIATVLRNK
                     TGHDFHGYKQQTFLRRVQRRMHVVQAEDVNTYAKLLRSHPEEVQSLFNDLLIGVTQFF
                     RDNKEFEVLEGEVIPRILDGKDIGDTVRVWVLGCATGEEAYSIAILLREAMASREVSP
                     HVQIFATDIDARALAAARAGRYPDTIARDVNAQRLARWFVKEGNTYCVVKELREMCIF
                     SAHNVIRDAPFSKLDLISCRNLLIYLNADLQNRVIPLFHFA"
     gene            complement(1876..2061)
                     /locus_tag="VHN20_01740"
     CDS             complement(1876..2061)
                     /locus_tag="VHN20_01740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724522.1"
                     /translation="MMIDQLCERAEAAIDESRRVKHELDRILSDMRFIAEHRGVVAEG
                     IHRWLKEVERKIRIARL"
BASE COUNT          402 a          771 c          769 g          449 t
ORIGIN      
        1 gggcaaaatg gaacagcgga atcacccggt tctgcagatc ggcgttgaga tagatcagga
       61 ggttgcggca ggagatcagg tcaagtttcg agaacggtgc atccctgatg acgttatgcg
      121 ccgagaagat gcacatctcg cgcaactcct tgaccacgca ataggtattg ccctccttaa
      181 cgaaccagcg cgccagccgc tgggcgttaa cgtcgcgcgc gatcgtgtcg ggataacgcc
      241 cggcgcgagc agccgccaag gcccgggcgt cgatgtcggt tgcgaagatc tggacgtggg
      301 gcgagacctc gcggcttgcc atcgcttcgc gcagcaggat ggcaatcgaa tacgcctcct
      361 cacccgtggc gcagccaagc acccagacac ggacggtgtc gccgatgtcc ttgccgtcga
      421 ggatcctggg aataacctct ccctcgagca cctcgaattc cttgttgtcg cggaagaact
      481 gggtgacacc aatcagaagg tcattgaaga gactctgcac ctcctccggg tggctgcgca
      541 gcaacttggc gtaagtgttc acgtcctcgg cctgcaccac gtgcatgcgg cgctggaccc
      601 ggcggaggaa ggtctgctgc ttgtagccgt ggaaatcgtg cccggtcttg ttgcgcagta
      661 ctgtggcgat ctgggcaagt gccccggaga cctccgcgag cgtctcgtcg agggtcttgc
      721 gttcgcgcag cctggcgaga tgacgtccgt agatggcgat gcgctcgggg atggcatcca
      781 gcggcacgac gaagtcggcg agcgcgccag gcaggttgcc ggcggacggc tccgacaggt
      841 gctcgtcagg cccctgctcg gcgatcgtga ggccgccgcc ctccttgatg gtcgcaagcc
      901 caagcgtgcc gtcgccggca gttccgtaga gaatcacgcc gagcgcgctc tcaccctgat
      961 cctcggccag agagaccagg aagctgtcga tcgtgccccg ggaccccggc ggctcctccg
     1021 ccgagtggat gcggaagcgg ccgttctcga ccgtgacgat ggcgttggcg ggactcaggt
     1081 aaatgcagcc gccttcgagg ggcttgccgc cctcgatcgg cgcgagctta ccgccgcggc
     1141 gcgcgatggc ctcgaacagc ggccgctcat caagagcctc gcgctgctgc agaaccatga
     1201 ctatcgcctg atccggggcg gcagagagct tgccaagcag gcttgccagg gactgcgcga
     1261 cagccgcgga ggcgccgatg ccgatcacga cgggggttcc aggctggtgt gccccctctg
     1321 cggcggactt ctccttcgcg ggtcgtcccc gcttgttgct gttatagctg ctcacgactg
     1381 gaaccctgcc tcggcggtct tcccgatccg gcaatgccgc gaccctcgca tgacgggtca
     1441 atgagagcaa cggcgcacat gcgcgccggt tcaaacggac gtcccgcgcc ggcgtagttc
     1501 ttcactgcca tgagtgccgg aactcgtgcc tcagctgccg gcgcctccga gcctctcgcg
     1561 aagaagttga ccggccgcaa ggctgaggtc gggcctgcgc gcgtgcgcct cgcgtcaggt
     1621 gggctccttc gacgctgtgt tgcccatccg cttttgtcgc ggcgctccag gaacgctgca
     1681 tgctcggcac gctccagttt ggcgcctgag ccgcagcata ttggtgaggt tccgttcggc
     1741 ggcgtcgacc tgtgctctcg tctctcggcg cagactctcg cttgcgcgga tcgcggcgtc
     1801 ggcgcgggca agaagcggat cgtcgctcat gcggcgaaaa gtggaatggc tggtccacga
     1861 cccgcattca catacttaaa gccgagcgat ccgaattttg cgttccacct ccttcagcca
     1921 gcggtggatg ccctcagcga cgacgccgcg gtgctcggca atgaagcgca tgtcgctcag
     1981 gattcggtcc agctcgtgct tcacgcgccg gctctcatcg atcgctgctt ctgccctctc
     2041 gcaaagttgg tcgatcatca cgtatttaac atacgctagt cggcgcccaa cgtcgtttgt
     2101 cgccgagcgc cgcatcgcgg acaggctttg ggctttatcg gcctaaccgc gagggcatct
     2161 gctcgccccg ttgccgctgg tcgcgcgccg caacaagggg tcaagggctg ccccggcatc
     2221 ctgcgactga agcaactcaa gctcgaactt gagccgaagc ttttcgagat catgcggcaa
     2281 agcgggaggg cttgccgcag tgacggcctc cgcttgtgga ttcaaccggt cctgccgtgc
     2341 cttgtcggcc atcggaagct aagcgcgcca aacattgttt ggttccaaag c
//
LOCUS       DATAIQ010000101         5136 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_282394, whole genome shotgun sequence.
ACCESSION   DATAIQ010000101 DATAIQ010000000
VERSION     DATAIQ010000101.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 5136)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5136)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5136
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_282394"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            87..2690
                     /locus_tag="VHN20_01745"
     CDS             87..2690
                     /locus_tag="VHN20_01745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018042667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02302 family protein"
                     /protein_id="HEX2724523.1"
                     /translation="MNASPSPAKGSQAPSNPRSALQMRLERLVGRARAALWWEGAWPA
                     LWVPIGIGLAFLAVSWLGLWLDASPLARKIGLALFAAAFLVSLWPLIRLHRPRRTAAL
                     DRLDRDSGLRHGPARAFDDTLALGHGDPGSRALWEMHRRRAETALAGLRVAMPRPDMP
                     RRDRYALRAAALVAVVASAFVAGPELGSRIAAAFDWRSPGAAGPSFRVDGWIDPPHYT
                     RLPPLMIDLAAGEQRLRAPIRSTLVIRVAGKADVTVTPGHGLAAMPVPENQRPDLREQ
                     RFTLTGNADLSVRTGLTGGLKLAVEAIPDKPPEIAFAGTPESNARGTFNVGYRAKDDY
                     GITGVEGLVEKGEGFVGRRSLVAAPRMALTLPPDALGEVDTKTTVDLTTHPWAGARVK
                     LTLLARDEAGQEGRSDTIDFVLPQRPFTKPLAKALVEQRRKLVLDPDDRRRVQMALDA
                     LLIAPDRYTPQWGVYLGLRSAGDRLRSARSDGDLLEVADFLWNMAVQMEDGDLSDAER
                     ELRAAQERLREALERNAPEEEVRRLTDALRQAMDRFLREFAERMQREGQQAEQNGRTP
                     DRVISQDDLNRMLNQMEEAMRRGDMAEAQRLLDQLRNILENLQTARPNSRMTDPLARE
                     MNRSMEELDQLSRDQQQLRDETFRQGQERRMQRGDRRQQPGQQGQRQQGQRGQRQPGQ
                     QGGQEQGEGEDGQMDPEGLGRRQQALRERLKELQRRMRGMGMQNEKGLEDAEGAMGDA
                     EGALGQGQEGQAVDAQGRALEGLQRGMQGMAQQMQQMMGQGDGTDPGGDPGPGNPNGR
                     AQNSPRNNDPLGRPTRSRDYSDGQVRVPTADESAMQRARRIMEELRRKLGDPTRPREE
                     LDYFDRLLRRN"
     gene            2816..3007
                     /locus_tag="VHN20_01750"
     CDS             2816..3007
                     /locus_tag="VHN20_01750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015688858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin transmembrane helix small protein"
                     /protein_id="HEX2724524.1"
                     /translation="MDTLISSLVPIATAAVAVVLLLGLFNMLRGGSPNTSQRLMRLRV
                     LLQFIAIIVIMGVLWWRAM"
     gene            3339..4487
                     /locus_tag="VHN20_01755"
     CDS             3339..4487
                     /locus_tag="VHN20_01755"
                     /inference="COORDINATES: protein motif:HMM:TIGR01414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HEX2724525.1"
                     /translation="MLSAVGRELLRTSKRRVGRSAVFVAAFVAGAPATASDILFVRAP
                     FSTLQAIDGRIDASRAEQTARREANVPVDYMQQAGGAAVPRTAVAAVPGLAISEPIST
                     PATPATRIWGSGFGYWSRTGTDANGAGFTTRGGGGTVGLDRFVDPSLLVGMALTYSHA
                     DTKGLGVRSEADTVSASAYAFWAPYAGWEIEGQAGVNRSEIDSSRILTFGGFALPVSG
                     DVDAVGFTALANAGYRFRMPTSAGQAFFKPFAGLTYTAQDRDDYTEAGAFGPTLFFPS
                     KTFERSTVNVGAAIGIDLDAGNGWTVRPELRAAWSHHLIDPSPPIPALLAGVPITLRD
                     PQPGRDGALVAFELTAVRGNVQLFGGYAGEFRSNLDAHQGHAGIRFTW"
     gene            4838..>5136
                     /locus_tag="VHN20_01760"
     CDS             4838..>5136
                     /locus_tag="VHN20_01760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724526.1"
                     /translation="MRGNEKGRGRKGPPGSAVALWLALYLAILASLLALVSSVVAQQP
                     PPDAGVQAEMERARRALAKGLSERAKGASDAERAPAAPGAAVDRQDDDLMERARRA"
BASE COUNT          816 a         1747 c         1765 g          808 t
ORIGIN      
        1 ggggtgcgcc ggatcggggc tgcccgccga aaccaaaaag cgcggaatgg atttgaggtg
       61 aagccatccc ccgccaggag agcttgatga acgccagccc gagcccggcc aagggttcgc
      121 aagccccgag caatcccaga agcgcgctac agatgcggct cgaacggctc gtcggccggg
      181 cgcgcgcggc gctgtggtgg gaaggggcct ggccggcgct ctgggtgccg atcgggatcg
      241 ggctggcctt cctggccgtc tcgtggctcg gcctgtggct cgacgcctcg cccctcgccc
      301 gcaagatcgg cctcgcgctg ttcgctgccg ccttcctcgt ctccctgtgg ccgctgatcc
      361 gcctgcaccg tccgcgccgc accgcggccc tcgatcgcct ggatcgcgat tcgggcctca
      421 ggcacgggcc cgcccgcgcc ttcgacgaca cgctcgccct ggggcacggc gatcccggct
      481 cgcgcgccct ctgggaaatg catcgccgcc gcgccgaaac ggcgctggcc ggcctccgcg
      541 tcgccatgcc tcgtcccgac atgccgcgcc gcgaccgtta tgcgttgcgc gccgcagctc
      601 tcgttgccgt cgtggcgagc gcgttcgtgg ccggccctga gctgggatcg cgcatcgccg
      661 ccgccttcga ctggcgttcg cctggagccg cggggccgag cttccgcgtc gacggctgga
      721 tcgacccgcc gcattacacg cgcctgccgc cgctgatgat cgacctggcc gccggcgagc
      781 agcgcctgcg cgcgccgatc cgctcgacgc tcgtcatccg ggtcgcgggc aaggccgacg
      841 tgaccgtgac gcccgggcac gggcttgcgg caatgccggt tccggagaat cagcggccag
      901 atctgcgcga gcagcgcttc accctgaccg gcaatgccga cttatccgtc cgcaccggcc
      961 tgaccggcgg cctcaagctc gccgtcgaag cgatccccga caagccgccg gaaatcgctt
     1021 tcgcgggcac gcccgagagc aacgcgcgcg gcaccttcaa cgtcggctac cgggccaagg
     1081 acgactacgg catcacgggc gtcgaaggcc tggtcgagaa gggcgagggc ttcgtcggcc
     1141 gccgctcgct cgtggcggcg ccgcgcatgg cgctgaccct tccgcccgac gcgctcgggg
     1201 aagtcgatac gaagacgacg gtcgatctga cgacgcatcc atgggcgggg gcgcgcgtga
     1261 agctgacgct tctcgccagg gacgaggccg gccaggaagg acgcagcgac acaatcgact
     1321 tcgtcctgcc gcagcgtccg ttcacgaagc cgctcgccaa ggcgctggtc gagcagcgcc
     1381 gcaagctcgt gctcgatccc gacgaccgac gccgcgtgca gatggcgctc gatgcgctcc
     1441 tgatcgcgcc cgatcgctac acgccgcaat ggggcgtgta tctcggtctg cgcagcgccg
     1501 gcgaccggct gcgctcggcg cgcagcgacg gcgatctgct cgaggtcgcc gattttctct
     1561 ggaacatggc cgtgcagatg gaggacggcg atctgtccga cgccgaacgc gagctgcgtg
     1621 ccgcccagga gcgcttgcgc gaggcgctgg agcgcaatgc gcccgaggag gaggtccggc
     1681 ggctcacgga cgccctacgc caggcgatgg accgttttct gcgcgagttt gcggaacgca
     1741 tgcagcgcga gggacagcag gccgagcaga acgggcgcac gccggatcgc gtgatctcgc
     1801 aggacgacct caaccgcatg ctcaaccaga tggaagaggc catgcgccgc ggcgacatgg
     1861 ccgaggcgca gcgcctcctc gaccagttgc gcaacatcct cgagaacctg cagaccgcgc
     1921 ggcccaacag ccgcatgacc gatccgctgg cgcgggaaat gaaccggtcg atggaagagc
     1981 tcgatcagct gagccgcgat cagcagcagc tgcgcgacga gacgttccgg caaggccagg
     2041 agcggcgcat gcagcgcggc gaccgccgcc agcagccggg ccagcaaggc caacgccagc
     2101 aggggcagcg tggacagcgc cagcctggtc agcaaggcgg ccaggagcag ggcgagggcg
     2161 aggacggcca gatggacccg gaagggctcg gccgccggca gcaggcgttg cgcgagcgcc
     2221 tgaaggaact gcagcggcgc atgcgcggca tgggcatgca gaacgagaag ggcctcgagg
     2281 acgccgaagg cgccatgggc gatgcggaag gcgcgctcgg ccaaggccag gaaggccagg
     2341 cggtcgatgc gcagggccgc gcgctcgagg ggctgcagcg cggcatgcag ggcatggcgc
     2401 agcagatgca gcagatgatg gggcaggggg acggcaccga ccccggcggc gatccggggc
     2461 ccggcaaccc gaatgggcgt gcccagaaca gcccacgcaa caacgatccg ctcggccgcc
     2521 cgacacgcag ccgggactac tcggacggcc aggtgcgtgt gccgactgcc gatgaatcgg
     2581 cgatgcagcg cgcccgccgc atcatggaag agctgcgccg caagctcggc gatccgacgc
     2641 gcccgcgcga ggagctcgac tatttcgacc gtctgctgcg gcggaactaa cgtcgcccct
     2701 tcatgacgac gcggctcggc gcttctcgct gcggattttt cacgctggca ccgccggtaa
     2761 gcgcatgcgc gtcggccgcg gatgatctgt gtttgtcgct caatgaaata gcgtcatgga
     2821 taccctgatc agctcactcg ttccgatcgc cacggcggcc gtcgccgtcg tgcttctgct
     2881 gggccttttc aatatgctgc gcggcggcag ccccaacaca tcgcagcgcc tgatgcgcct
     2941 gcgcgtgctg ctgcaattca tcgccatcat cgtcatcatg ggcgtgcttt ggtggcgcgc
     3001 catgtagcgt gatccgcaca gagcctgccg cacgcgaagg cgaacaacgc ttctctgaca
     3061 agagcttgtc cgaggcttta ggatccgcac ccgagaaaag atgaccatgt catcgtgtgc
     3121 cgcgcatgat cgctgaacgg ttttcgattc cacatgagtg aaaactgctc tcgcgacccg
     3181 tcgcaccgat gcgcgggtgt tgctgcgatg acgcaccgcg ccggcaagag tcgcgtgccc
     3241 tcggaatggt ggacgcgcta caaacatttc cggcttggcg cggtcggtgg acgcgcttat
     3301 cgtgaccgca agttcgccca atgcgtatgg gggcatcaat gttgagtgct gtggggcgcg
     3361 agttgctgcg cacaagcaag aggcgcgtcg gccgcagcgc cgttttcgtc gcggcattcg
     3421 ttgcgggggc gccggcgacc gcttcggaca tcctttttgt gcgcgcgccg ttctccacat
     3481 tgcaggcgat cgacggacgc atcgacgcga gccgcgccga gcagacggct cgccgcgaag
     3541 cgaacgtgcc ggtcgactac atgcagcaag cgggtggcgc ggccgtgccg cgaaccgcag
     3601 ttgccgcggt tcccggcctt gcgatttccg aaccgatctc gacccctgcg acccctgcga
     3661 cgcgcatctg gggatccggg tttggctatt ggtcgcggac cggcaccgac gcgaacggcg
     3721 ccggtttcac gacgcgaggt gggggcggca cggtcgggct cgaccggttc gtcgatccat
     3781 cgcttcttgt cggaatggcg ctgacctatt cgcatgccga caccaaggga ctgggcgtgc
     3841 gtagcgaggc cgacaccgtg tcggcctccg cctatgcgtt ctgggccccc tacgcgggct
     3901 gggagatcga aggccaggcc ggcgtcaacc gctccgagat cgattcctcg cgcatcctca
     3961 ccttcggcgg cttcgcgctg ccggtcagcg gcgacgtgga cgccgtcggc ttcaccgctc
     4021 tcgccaatgc cggttatcgc ttccgcatgc cgacttcggc cggccaggca ttcttcaagc
     4081 cgttcgccgg cctgacatat acggctcagg accgcgacga ctacacggag gccggcgcgt
     4141 tcgggccgac gctgttcttt ccgtccaaaa ccttcgagcg ctcgacggtc aatgtcggcg
     4201 ccgcgatcgg aatcgatctc gatgcgggca acggctggac cgtgcggccg gaattgcgcg
     4261 ccgcgtggtc gcatcatctg atcgacccgt cgcctccgat ccctgcgctg cttgccggcg
     4321 tgccgatcac gctgcgtgac ccgcagcccg gccgggacgg cgcgctagtc gcgttcgagc
     4381 tgaccgctgt cagaggcaat gtgcaactct tcggcggcta cgcgggcgag ttccgctcca
     4441 atctcgacgc gcaccagggg cacgccggca tccgtttcac ctggtagcgt gccaggatgc
     4501 tgccggttgc ccagctaggg cggggatcgc cgcttgagtt ggtagcgtgc caggatgctg
     4561 cctgatgccc agatacggcg cggattgccg ctgatcgaat cgattcccac gccgtcctgt
     4621 tgagcgcctg atcccggagg acttcggggc aaccttttgg gcgaaacggt gtttgtcgaa
     4681 gtcatgctca gacgggcatg acttcgacaa tcgacccgct gcagctttct ctcgcgcgtg
     4741 acaaagtggg acgagtcctc gttcatccac agtcatttgg gcctgcgcag gaaccgtcgt
     4801 gcttgcaaac ggttgagcct gcggaggtca ctaatagatg cgcgggaatg agaagggccg
     4861 tggccgtaaa ggcccgccgg gctcggcggt tgctttatgg cttgcccttt atcttgcgat
     4921 tctcgcatct ctcctcgccc tcgtatcgag cgttgttgcg cagcagccgc cgccggatgc
     4981 cggcgtgcaa gcggaaatgg agcgggcgcg gcgtgcgctc gcgaaaggcc tgtccgaacg
     5041 cgccaagggc gccagcgacg cggagcgcgc gcccgccgct ccgggcgcag ccgtcgatcg
     5101 tcaggatgac gacctcatgg agcgtgcgcg ccgtgc
//
LOCUS       DATAIQ010000102         3164 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_420875, whole genome shotgun sequence.
ACCESSION   DATAIQ010000102 DATAIQ010000000
VERSION     DATAIQ010000102.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3164)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3164)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3164
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_420875"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..232)
                     /locus_tag="VHN20_01765"
     CDS             complement(<1..232)
                     /locus_tag="VHN20_01765"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003521508.1"
                     /note="catalyzes the formation of prolyl-tRNA(Pro) from
                     proline and tRNA(Pro); Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HEX2724527.1"
                     /translation="MRLSRYFLPTLRETPKEAEIVSHRLMLRAGLIRQQAAGSFSWLP
                     LGLRVLKKINRIVREEQDRSGAIEILMPTIQSA"
     gene            complement(585..932)
                     /locus_tag="VHN20_01770"
     CDS             complement(585..932)
                     /locus_tag="VHN20_01770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1467 family protein"
                     /protein_id="HEX2724528.1"
                     /translation="MTRALQRIVAQAASSLASTIAVVLVVSLAAIAAAVLVFGLSISG
                     ATGLYFVVWWIAVFVVLPFGVRSQSESGEIAAGTEPGAPMMPALREKAIWTTGLAGMV
                     LMAAAWLLPLAGL"
     gene            complement(929..1333)
                     /gene="mce"
                     /locus_tag="VHN20_01775"
     CDS             complement(929..1333)
                     /gene="mce"
                     /locus_tag="VHN20_01775"
                     /EC_number="5.1.99.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007626175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA epimerase"
                     /protein_id="HEX2724529.1"
                     /translation="MIGRLNHVAIAVQDLAAAARVYRDTLGAQVSAPAPQPDHGVTVV
                     FIDLPNTKIELLEPLGDASPIRNFLEKNPGGGIHHVCYEVDDIRTARDRLVSSGARVL
                     GSGEPQIGAHGKPVLFLHPKDFCGTLVELEQA"
     gene            complement(1388..3061)
                     /locus_tag="VHN20_01780"
     CDS             complement(1388..3061)
                     /locus_tag="VHN20_01780"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003598177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease J"
                     /protein_id="HEX2724530.1"
                     /translation="MASPQDELVFVALGGLGEIGMNAALYGFGPPRRRQWILVDCGMG
                     FASEEHLPGVDVMYPDLKFIEEERGNLLGLLITHAHEDHIGALAELWPRLGVPVYATR
                     FAIGLLETRRLSEPGAPKIPLNEVVPGQRITLGPFSIDYVPVAHSIPESYGLAIRTPH
                     GLVVHTGDWKLDDTPYLGNTTAESVFGALGDEGVLALVGDSTNVVREGRSPSESEVAA
                     RLGQLIASAPHRVAVTTFASNVARLKAVADAARACGREVVVVGRAMDRVVDVAQECGY
                     LDGLPEFRGPDTYGYLPRDKVVALLTGSQGEPRAALARVAADEHPEVALSAGDWVIFS
                     SRTIPGNEKEVGQIINTLLRRGIQVITDRTELVHVSGHPRRAELAAMYRWTRPRIAVP
                     AHGEEMHLAEHAAFAKAQGVPEVVRARNGSIVRLAPGPAEIIDEAPTGRLYRDGDIVI
                     RMGERALPERRKLAFTGVISVAVAIDSRGEIAGDPVIELMGLPAQTRRGEAMADVIAD
                     AVSEVLDGLPRPKRRDPEAVEQAVHRAVRGAANAVWGKKPACHVLVIEV"
BASE COUNT          548 a         1075 c         1059 g          482 t
ORIGIN      
        1 cggccgactg gatcgtcggc atgaggatct cgatcgcgcc cgagcggtcc tgctcctcgc
       61 ggacgatgcg gttgatcttc ttcagcacgc gcaatccgag cggcagccag gagaagctcc
      121 ccgccgcctg ctggcggatc agcccggcgc gcagcatcag gcgatgcgag acgatctccg
      181 cctctttggg cgtctcgcgc aaggtgggca ggaaatagcg gcttaaacgc atgaggcgcc
      241 tttacagggg attacaggga acatggtgcg attctggaca gcgcacacaa agacacacga
      301 catgaaaaac acaagcggag gcgacccttt tgggccatgc gacgcacccg tttgggtccg
      361 gtctgccgag ataggcggcg cctgttgcac aaacaggtga caaatactgt tcacgaccct
      421 ataagggccc aggcacggcc cgttaagtag agggtgcagg ccccaagtct tgggaggaac
      481 aactcaattc gccgcgttcg aggcgatggc gtgtcataag ccagggttcg ccgaaaggca
      541 ttcaagcaag gcaccggcct tgcttttttg tttgtgcccc ttcgctacag acccgcgagc
      601 ggcagcagcc aggcggcagc catcaggacc atcccggcaa ggccggtcgt ccagatcgcc
      661 ttctccctga gcgccggcat catcggcgcc cccggctcgg ttccggcggc gatctccccg
      721 ctttcggact ggctgcgcac cccgaacggc agcacgacga acacggcgat ccaccacacg
      781 acgaagtaga ggccggtcgc cccggagatg gacaggccga agacgagaac cgccgcggcg
      841 atggccgcca gcgagacgac caggacgacc gcgatggtcg aggcgaggga gctggccgcc
      901 tgcgccacga tcctttgcaa ggcccgcgtc acgcctgctc gagctcgacc agcgtgccgc
      961 aaaagtcctt cgggtgcagg aacagcaccg gcttgccgtg cgctccgatc tggggctcgc
     1021 cggagccgag cacgcgggcg ccgctgctga ccagccggtc gcgggcggtg cggatatcgt
     1081 ccacctcgta gcagacgtga tggatgccac cgcccgggtt cttctccagg aaattgcgaa
     1141 tcggcgatgc gtcgccgagg ggctcgagga gctcgatctt ggtgttcggc aggtcgatga
     1201 acaccacggt cacgccgtga tccggctgcg gcgccggagc cgaaacctgc gctccgagcg
     1261 tgtcccggta aacgcgggcg gccgcggcga ggtcctgcac cgcaatggca acgtggttca
     1321 atcggccaat catgctgtgc tcccgaagcg ggacagcact atccccgccg gatgatgccg
     1381 cggtccttca tacctcgatg acgaggacat ggcatgccgg tttcttgccc cagaccgcgt
     1441 tggcggctcc gcgcacggcc cgatgcacgg cctgctcgac cgcctcggga tcgcggcgct
     1501 tgggccgggg cagcccgtcg agcacctcgg acaccgcgtc cgcaataacg tcggccatgg
     1561 cctcgccccg ccgcgtctgc gccgggaggc ccatcagttc gatcaccgga tcgccagcga
     1621 tctcgccgcg gctgtcgatc gcgacggcaa ccgagatgac gcccgtgaag gcgagcttgc
     1681 gccgctcggg tagggcccgc tcgcccatgc ggatgacgat atcgccgtcc cggtaaaggc
     1741 ggccggtcgg cgcttcgtcg atgatctcgg cgggtcccgg tgccaggcgc acgatgctgc
     1801 cgttgcgagc ccgcacgacc tccggcacgc cttgcgcctt ggcgaaggcc gcgtgctcgg
     1861 ccaggtgcat ctcctcgcca tgcgccggca cggcgatgcg cggcctcgtc cagcgataca
     1921 ttgcggcgag ctcggcgcga cgcgggtggc cggagacatg caccagctcg gtgcggtcgg
     1981 tgatcacctg gatgccgcgg cggagcagcg tgttgatgat ctggccgact tccttctcgt
     2041 tgcccggaat ggtgcgggac gagaagatca cccagtcgcc cgccgacagc gcgacctccg
     2101 gatgctcgtc cgccgcgacc cgcgccaggg cggcgcgggg ttctccctgc gagccggtga
     2161 gcagcgccac gactttgtcg cgcggcaggt agccgtaggt atccgggccg cggaattcgg
     2221 gcagaccgtc cagatatccg cattcctggg caacgtcgac gacccggtcc atggcccgcc
     2281 caacgacgac cacctcgcga ccgcacgcgc gcgcggcgtc ggccaccgcc ttgaggcggg
     2341 ccacgttcga cgcaaaggtc gtgaccgcga cacgatgcgg cgcggaggcg atcagctggc
     2401 cgaggcgcgc ggcgacctcg ctctcgctgg gcgagcgccc ctcccgcacc acgttggtcg
     2461 aatcgccgac cagggccagc acgccttcat cgccgagcgc cccgaacacg gactcggccg
     2521 tggtgttgcc gagatacggc gtgtcgtcga gcttccagtc gcccgtgtgc acgacgagcc
     2581 catgcggggt gcggatcgcc agcccgtagg attccggaat cgaatgcgcc accggaacgt
     2641 agtcgatcga gaacggcccc agcgtgatgc gctggcccgg aacaacttcg ttgagcggga
     2701 tcttgggcgc gccgggctcg gagagccggc gggtttccag aagaccgatc gcgaaccgcg
     2761 tcgcgtagac gggcacgccg aggcgcggcc acagctcggc gagagcgccg atatggtcct
     2821 catgcgcgtg cgtgatcagc agcccaagaa ggttgccgcg ctcctcctcg atgaatttca
     2881 ggtcgggata catgacgtcg acgccgggca ggtgctcttc gctggcgaag cccatgccgc
     2941 aatcgaccag gatccattgc ctccgtcgcg gcggaccgaa gccgtacagc gcggcattca
     3001 tgccgatctc gccgagcccg ccaagcgcaa cgaacacaag ctcgtcctgg ggagacgcca
     3061 tcaactctac ccggataccg atgagccgga ccgcgggccg gctgaatgta gatgagggaa
     3121 gtaaagatcg ccggcatcga tcagttccat gccgccgccg gttt
//
LOCUS       DATAIQ010000103         5403 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_282742, whole genome shotgun sequence.
ACCESSION   DATAIQ010000103 DATAIQ010000000
VERSION     DATAIQ010000103.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 5403)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5403)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5403
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_282742"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1016
                     /gene="sufB"
                     /locus_tag="VHN20_01785"
     CDS             <1..1016
                     /gene="sufB"
                     /locus_tag="VHN20_01785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019903787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufB"
                     /protein_id="HEX2724531.1"
                     /translation="AKAGVIFMPISEAIREHPELVRKYLGSVVPVTDNFFATLNSAVF
                     TDGSFVYVPPGVRCPMELSTYFRINERDTGQFERTLIIADKGSYVSYLEGCTAPKRDE
                     NQLHAAVVELVALDDAEIKYSTVQNWYPGDADGRGGIYNFVTKRGDCRGKNAVITWTQ
                     VETGSAITWKYPSCILRGDGSRGEFYSIAISNGRQQVDSGTKMIHLGKNTTSRIISKG
                     IAAGRSDNTYRGLVSAHRKATGARNFTNCDSLLIGNKCGAHTVPYIESKNASAVFEHE
                     ATTSKISEDQLFYCRQRGLGEEEAVALIVNGFVKDVLQTLPMEFAVEAQKLIAISLEG
                     SVG"
     gene            1141..1896
                     /gene="sufC"
                     /locus_tag="VHN20_01790"
     CDS             1141..1896
                     /gene="sufC"
                     /locus_tag="VHN20_01790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly ATPase SufC"
                     /protein_id="HEX2724532.1"
                     /translation="MLEIKNLTVQIEDKRILNGLDLTVKRGEVAAIMGPNGSGKSTLS
                     YVVAGKDDYEILDGEILLDGENILDMEPDERAAKGLFLAFQYPLEIPGVATMTFLKAA
                     VNAQLRARGEAELTTPAFIKRVNAAAGQLQIDKDMLRRALNVGFSGGEKKRMEILQMA
                     LLQPSFCILDETDSGLDIDALRIVSEGVNALRSPERAFLVITHYQRLLNHIVPDTVHV
                     MANGRIVRSGGPELAHELEANGYADYVQQEQAA"
     gene            1905..3236
                     /gene="sufD"
                     /locus_tag="VHN20_01795"
     CDS             1905..3236
                     /gene="sufD"
                     /locus_tag="VHN20_01795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufD"
                     /protein_id="HEX2724533.1"
                     /translation="MAAELKLVRTAAEETLVARFPAAKASLPGDAAVLDLREVAFELL
                     ARRGLPHRRVEEWKYTDLRGLMREAAPLAANPTSADVAAALNGAKAFSAVEAVRVTLV
                     NGHFAPELSDLERLPDGIEVIPFAAALASGHPLARQANPVESARDNAAYALNTAFMND
                     GAIIRVASGTVATSPIHLRFLNKATSAFATASRVLVIVEDRASVTLLESHEGPDGVAY
                     QPNTVVDLIAHDNAAVKHVRLAADGRDALVLSTLAAKLGASTTFDTVNVVAGPGVTRH
                     QVFLTFAGEHSRATVNGATMLNGKQHADTTLLVDHAVPHCDSRELFKTVIDDEATGVF
                     QGKIIVHPQAQKTDGRMMSAALLLSEGGTMNNKPELEIFADDVQCGHGATCGALDEDL
                     LFYLMARGLPRAEAESLMVQAFLGEAVEAVEHEATREALVAVIEGWLRARH"
     gene            3277..4518
                     /locus_tag="VHN20_01800"
     CDS             3277..4518
                     /locus_tag="VHN20_01800"
                     /EC_number="2.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012383118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_function: GO:0031071 - cysteine desulfurase activity
                     [Evidence IEA];
                     GO_process: GO:0006534 - cysteine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase"
                     /protein_id="HEX2724534.1"
                     /translation="MNVHAQVQPYDVEAIRLDFPILAQQIYGKPLVYLDNAASAQKPR
                     AVIDAMVRTMETGYANVHRGLHHMANVATEAYEGAREDVRKFLNAGSSDEIVFTRSAT
                     EAINLVADSYGRMAIGEGDEIILSIMEHHSNIVPWHFHRERKGAVIKWAPVDDDGNFL
                     LDEFEKLFSPRTRIVAITHMSNVLGTVTPVKDIVRIAHAHGVPVMIDGSQGAVHLDVD
                     VRDLDVDFYVFTGHKVYGPTGIGVLYGKHEWLARMPPYEGGGEMINEVRCEGITYNEP
                     PHRFEAGTPPIVEAIGLGAAVRYMTGLGRERIRAHEEMLSAYAHERLGAMNSLRIVGR
                     AKGKGAILSFEMRNAHAHDVATVIDRQGVAVRAGTHCAMPLLSRFGTTSTCRASFGLY
                     NTMAEIDKLAAALQKAEALFA"
     gene            4583..4915
                     /locus_tag="VHN20_01805"
     CDS             4583..4915
                     /locus_tag="VHN20_01805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018043448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SUF system Fe-S cluster assembly protein"
                     /protein_id="HEX2724535.1"
                     /translation="MGPGLPTEELDRLTDDIIAALKTVYDPEIPADIYELGLIYRVDI
                     DENRNVTVDMTLTAPGCPVAGEMPTWVENAVASVQGVQSVRVNMVFDPPWDQSRMSDE
                     ARVALDMW"
     gene            4945..5358
                     /locus_tag="VHN20_01810"
     CDS             4945..5358
                     /locus_tag="VHN20_01810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012333100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX2724536.1"
                     /translation="MPRLNGVIETALYVDDLGRAARFYEDVLGLTALTSDRRFRAYAV
                     GARSVLLLFQRGATRETVVLPGGTIPPHDGQGPLHVAFAVAADELDAWERRLDERGIA
                     IEGRTAWPRGGHSIYMRDPDGHLLEFATPGLWAIY"
BASE COUNT          978 a         1829 c         1748 g          848 t
ORIGIN      
        1 tggccaaggc cggcgtgatc ttcatgccga tctccgaggc tatccgcgag cacccggaac
       61 tggtgcgcaa atacctcggc tcggtcgtgc cggtcaccga caactttttc gcgaccctga
      121 actcggccgt gttcacggac gggtccttcg tctacgtgcc gccgggcgtg cgctgcccca
      181 tggagctgtc gacctacttc cgcatcaacg agagagacac gggccagttc gagcgcacgc
      241 tgatcatcgc cgacaagggc agctacgtct cgtatctcga gggctgcacg gcgccgaagc
      301 gcgacgagaa ccagctgcac gcagccgtgg tcgagcttgt cgcgctcgac gatgccgaga
      361 tcaaatactc aacggtccag aactggtatc cgggcgacgc cgacgggcgc ggcggcatct
      421 acaacttcgt caccaagcgt ggcgactgcc gcggcaagaa cgcggtgatc acctggaccc
      481 aggtcgagac cggctccgcc atcacgtgga aatacccgtc ctgcattctg cgcggcgacg
      541 gctcgcgcgg cgagttctac tcgatcgcca tttccaacgg gcgtcagcag gtcgattccg
      601 gcaccaagat gatccatctt ggcaagaaca cgaccagccg catcatttcg aaaggcatcg
      661 cggcgggccg ctccgacaac acctatcgcg gcttggtctc ggcacaccga aaggcaactg
      721 gcgctcgcaa cttcaccaac tgcgacagcc tgctgatcgg caacaaatgc ggggcgcaca
      781 cggtcccgta catcgagtcg aagaacgcgt cggcggtgtt cgagcacgag gccaccacgt
      841 ccaagatctc cgaggatcag ctgttctatt gccggcagcg cggcctcggc gaggaggaag
      901 ccgtcgccct gattgtcaac ggcttcgtta aggacgtgct gcagacgctg ccgatggagt
      961 tcgccgtgga ggcgcagaag ctgatcgcca tcagcctcga agggagcgtc gggtgacgca
     1021 tggcgtcatc ccggccgtag cgaagctgag cgccgggatc gcgtgcagaa cgaagcaccc
     1081 ttatcggaca atgatcccgc ggcggcttcg ccgtccggga tgacgaatac ggaaaccaac
     1141 atgctcgaaa tcaagaacct gacggtgcaa atcgaggaca agcgcatcct caatggtctc
     1201 gatctgacgg tgaagcgcgg cgaggtggcg gcaatcatgg ggccgaacgg ctccggcaag
     1261 tcgacccttt cgtacgtggt cgccggcaag gacgattacg agattctcga cggcgagatc
     1321 ctgctcgatg gcgagaacat cctcgacatg gagcccgacg aacgcgccgc caaaggactg
     1381 ttcctcgcct tccagtatcc gctcgaaatc ccaggcgtcg ccacgatgac cttcctcaag
     1441 gctgccgtta acgcgcagct gcgcgcgcgc ggcgaggccg agctcacgac gccggcgttc
     1501 atcaagcgcg tcaacgcggc tgccggccag ctgcagatcg acaaggacat gctcaggcgc
     1561 gcgctcaatg tcggcttctc gggcggcgag aagaagcgca tggagatcct gcagatggcg
     1621 cttctgcagc cgagcttctg catcctcgac gagaccgatt ccggcctcga catcgatgct
     1681 ttgcgcatcg tgtccgaagg cgtcaacgcg ctgcgttcgc cggagcgcgc cttcctggtg
     1741 atcacgcatt accagcgcct cctgaaccac atcgtgcccg acaccgtgca cgtgatggcg
     1801 aacggtcgca tcgtgcgctc gggcggcccc gaactggcgc acgagctcga ggccaacggc
     1861 tacgccgact acgtgcagca agagcaggct gcgtgaggtc cgcaatggca gccgagttga
     1921 aactggttcg cactgccgcc gaggagacgc tggtcgcgcg ttttccggcc gcgaaggcgt
     1981 cgctaccggg cgatgctgcg gtgctcgatc tgcgcgaggt ggcgttcgag ctgctcgcca
     2041 ggcgcgggct gccgcaccgc cgcgtcgagg aatggaaata cacggacctg cgcgggctga
     2101 tgcgcgaagc ggcgccgctt gccgccaatc cgacatccgc ggacgtggca gcggccctca
     2161 acggcgccaa ggcgttctcc gccgtggagg ccgtgcgcgt gactcttgtg aacggccatt
     2221 tcgcgccgga actgtccgac ctcgagcgcc tgcccgacgg catcgaggtg atcccgttcg
     2281 cggccgcgct cgcctcgggg cacccgctgg cgcggcaggc caaccccgtc gagagcgcgc
     2341 gcgacaacgc cgcctacgcg ctgaacacgg ccttcatgaa tgacggcgcc atcatccgcg
     2401 tcgcctcggg aacggtcgcc acctcgccga tccacctgcg cttcctcaac aaggcgacgt
     2461 ccgccttcgc gaccgctagc cgtgtgctgg tgatcgtgga ggaccgggca tcggtgacgc
     2521 tgctggaatc ccatgaggga ccggacgggg tcgcctacca gccgaacacg gtcgtcgatc
     2581 tgatcgcgca cgacaacgcc gcggtgaagc acgtgcggct cgctgccgac ggtcgggacg
     2641 cgctggtgct ctccacgctg gcagcgaagc tcggcgccag taccacgttc gacaccgtga
     2701 acgtggtcgc cggtccgggc gtcacacgtc atcaggtgtt cctgaccttt gccggcgagc
     2761 actcccgcgc cacggtcaac ggcgcgacga tgctcaacgg caagcagcac gccgacacga
     2821 cgctgctcgt cgaccatgcg gtgccgcatt gcgacagccg cgagctgttc aagaccgtca
     2881 tcgacgacga ggcgaccggc gtcttccagg gcaagatcat cgtgcaccca caggcacaaa
     2941 agaccgacgg ccgcatgatg tccgccgcgc tcctcttgtc cgaaggcggc accatgaaca
     3001 acaagccgga gctcgagatc tttgccgacg acgtgcagtg cggccacggc gccacctgcg
     3061 gcgcgctcga cgaagacctt ctgttctatt tgatggcacg cggcctgccg cgggccgagg
     3121 ccgaaagcct gatggttcag gcatttttgg gcgaagccgt cgaggcagtc gagcacgaag
     3181 cgacccgcga ggcgctggtc gccgtgatcg aaggctggct cagggcaagg cactgacatc
     3241 cgctgccggg gcaggggagg ggagcgaggc cgagagatga acgtgcacgc gcaagtgcag
     3301 ccttatgatg tcgaggcgat ccggctcgac tttcccatcc tcgcgcaaca gatctacggc
     3361 aagcccctcg tctacctgga caatgccgcg tcggcacaaa agccgcgcgc ggtgatcgac
     3421 gccatggtcc gcaccatgga gaccggctac gccaacgtgc atcgcggcct gcaccacatg
     3481 gccaacgtcg cgaccgaggc ctacgagggc gcgcgcgaag acgtgcgcaa attcctcaac
     3541 gccggctcga gcgacgagat cgtcttcacg cgttccgcga ccgaggcgat caacctcgtc
     3601 gccgactctt acggccgcat ggcgatcggc gagggcgacg agatcatcct gtcgatcatg
     3661 gagcatcact ccaacatcgt tccctggcac ttccatcgcg agcgcaaagg tgcggtgatc
     3721 aaatgggcgc cggtcgacga tgacggcaat ttcctgctcg acgagttcga aaagctgttc
     3781 tcgccgcgca ccaggatcgt cgccatcacg cacatgtcga acgtgctcgg caccgtcacg
     3841 ccggtgaagg acatcgtgcg catcgcgcat gcgcatggcg tgccggtgat gatcgacggc
     3901 agccagggtg ctgtgcatct cgatgtcgac gtgcgcgatc tcgacgtcga tttctacgtg
     3961 ttcaccgggc acaaggtcta cggcccgacc ggcatcggtg tgctctacgg caagcacgag
     4021 tggctcgccc gcatgccgcc atacgagggc ggcggcgaga tgatcaacga ggtgcgctgc
     4081 gagggcatca cctacaacga gccgccgcac cggttcgagg ccggcacgcc accgatcgtc
     4141 gaggcgatcg gccttggcgc cgccgtgcgc tacatgaccg ggctcggccg cgagcgcatc
     4201 cgcgcccatg aagagatgct gtcggcctat gcccacgagc ggctcggggc catgaactcg
     4261 ctgcgcatcg taggccgcgc caagggcaag ggcgccatcc tctcgttcga gatgcgcaac
     4321 gcgcacgccc acgacgtcgc caccgtgatc gaccgccagg gagtggccgt gcgggccggc
     4381 acgcattgcg ccatgcccct gctcagccgc ttcggcacca cgtccacttg ccgtgcgtct
     4441 ttcggcctct acaacaccat ggccgaaatc gataagctcg ccgccgcctt gcaaaaggcc
     4501 gaagccctgt tcgcctgagg tttgtgccgt gaccaagcaa agcccgcccg aagcggcggc
     4561 ctcgaacacg ccggcggttg cgatcggtcc cggccttccc accgaagagc tggaccggct
     4621 gacggacgac atcatcgcgg ccctgaagac ggtctacgac ccggagatcc cggcggacat
     4681 ctacgagctc ggcctcatct accgcgtcga cattgacgag aaccgcaacg tcacggtcga
     4741 catgacattg accgcgcccg gctgtccggt tgccggcgag atgccgacct gggtcgagaa
     4801 cgcggtcgcg tccgtgcaag gcgtacagtc ggtgcgcgtc aacatggtgt tcgacccgcc
     4861 ctgggatcag agccgcatgt ccgacgaggc gcgcgtcgcc ctcgacatgt ggtgagcgcg
     4921 tctgctcgcg ccgcggccac gcagatgccc aggctcaacg gcgtgatcga gacggcgctc
     4981 tacgtcgatg acctcgggcg cgcggcgcgc ttctacgagg acgtgctcgg cctcaccgcg
     5041 ctcaccagcg accggcgctt tcgcgcctac gcggtcggcg cgcgcagcgt gctgctgctg
     5101 ttccagaggg gagcgacgcg cgaaacggtg gtcctgccgg gcggcaccat tccgccccac
     5161 gacggccagg gcccgctgca cgtggcattc gcggtcgcag cggacgagct ggacgcctgg
     5221 gagcggcgcc tcgacgagcg cggcatcgcc atcgaggggc gcacggcgtg gccgcgcggc
     5281 gggcacagca tctacatgcg cgatccggac ggccatctcc tcgaatttgc cacgcccggt
     5341 ctgtgggcga tctattgagg cgtttcgggc gtgtcggccg agcgtccggg cggccagccc
     5401 tcg
//
LOCUS       DATAIQ010000104         3557 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_5933, whole genome shotgun sequence.
ACCESSION   DATAIQ010000104 DATAIQ010000000
VERSION     DATAIQ010000104.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3557)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3557)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3557
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5933"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..226
                     /locus_tag="VHN20_01815"
     CDS             <1..226
                     /locus_tag="VHN20_01815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724537.1"
                     /translation="FVNLIRVVAIGARPQEAVDRIAASASKPLLRLIVLRAVRQALAD
                     AARGLGARSKALFLLPRSIHVIADGAVRWL"
     gene            331..507
                     /locus_tag="VHN20_01820"
     CDS             331..507
                     /locus_tag="VHN20_01820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724538.1"
                     /translation="MKLYPMIGVSQTRTDTVKRATEIFKTRDMVKPMPERVHPVNPRH
                     MQKPGSRWRGPVDE"
     gene            complement(580..1683)
                     /locus_tag="VHN20_01825"
     CDS             complement(580..1683)
                     /locus_tag="VHN20_01825"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX2724539.1"
                     /translation="MADRPRFSVLVVGRPHGVTRKRLGRLVEQAGGRLAERPGARVDL
                     VVFAHASARAALEAAPPLVLPAGVTAGARVVSESAFRRMLGLTPPPVPGERTLCAADL
                     VRAARLPPDMLACLAAFDVVEPVDDAFAYRDLLVAREVTRLLERGYPLAAIVEAALAL
                     RRARRSLSEARLAQTPWGEIVQELSGGFAHLDGQLALPLPHETGDADAVFAAAEACEA
                     GGDLAGAERLYRSAMAIDRADAAIPYNLGNILDAQGRRDEAVLAYYEALQRDPEFAEA
                     WFNLGVIDERDGRLTAAVAHYRAAAFAQPNFADALFNLALLLTQREDYDEAAALWDRF
                     LALEPRGPDADRARKGAALCRLAREGSARRNAG"
     gene            1893..2795
                     /locus_tag="VHN20_01830"
     CDS             1893..2795
                     /locus_tag="VHN20_01830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009492057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0045027 - DNA end binding [Evidence IEA];
                     GO_process: GO:0006303 - double-strand break repair via
                     nonhomologous end joining [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ku protein"
                     /protein_id="HEX2724540.1"
                     /translation="MAPRANWKGYLKLSLVSCEIALYPATSSSERVRFNRLNRQTGNR
                     LKQLLVDAQTEEPVDRADQIKGYQVGKNSYVQVEDEELDAIKIESTHTIDVESFVDID
                     EVDKRYLETPYYIAPEGSVGIEAFTVIRDAMRDKGKAGLGRVVISRRERMVLLEPLDK
                     GILATLLRYPYEVREPDEYFEDIPEVEIADEMRDLAAHIVERKASTFDPSKFEDRYEN
                     AVVDLLKSKEAGRPAHVPEAPRPSNVISLMDALRQSIAAEKGGAPAKASKPKAPSKTS
                     ADRAKAKEPAKEPAKKPRKARKAG"
     gene            2905..>3557
                     /locus_tag="VHN20_01835"
     CDS             2905..>3557
                     /locus_tag="VHN20_01835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016844101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta family hydrolase"
                     /protein_id="HEX2724541.1"
                     /translation="MTSVTETPAERVTIRVDDTRTVSGLWARPAQARACLVLAHGAGA
                     GMTHPSLETVAADLFARGIASLRYQFPFMEQGTKRPDPPPVAHAAVRAAVAEAARLAP
                     DLALFAGGRSFGGRMTSQAQAASPLPDVRGLVFLAFPLHPANRLSGERGRHLSDVHIP
                     MLFLQGTRDALAEPALLQPLCNELGARATLKLLDGADHAFHVLARSGRTDAEIRGEAV
                     "
BASE COUNT          587 a         1228 c         1219 g          523 t
ORIGIN      
        1 atttgttaac ctgattcgcg ttgtggcgat aggcgcgcgg ccgcaggagg ctgtggacag
       61 gattgccgca tccgctagca agccgttgtt gcgcctcata gttttgcgtg cggtgcgaca
      121 agcgctcgca gacgcggccc gtgggctcgg tgcacgttcg aaggcgctgt ttctgctgcc
      181 acgctcgatc catgtaattg cagacggggc ggtcaggtgg ctgtaatcgc cggtcccctc
      241 ttcttctcgt caacacttcc cggggacact ccagccccgt cttttgccgg gtgagacgcc
      301 tctctttcag tccagcgcga ggtgtttgcc atgaagcttt atccgatgat cggtgtctct
      361 caaacgcgca ccgataccgt caagcgcgcg accgaaatct tcaagacgcg cgacatggtc
      421 aagccaatgc cggagcgggt tcatcccgtg aatcccaggc acatgcagaa gccgggctcc
      481 cgctggcggg ggccggtgga cgaataggca cgcccctccg acccgcacgc tgacgcgccg
      541 agttcgacgg cacagccccg cgacgaccgg taagcctggt taccccgcgt tccgccgtgc
      601 gctgccttcg cgcgccaggc ggcagagcgc ggcgcctttc ctggcccggt cggcatcagg
      661 accgcgcggc tccagcgcca ggaagcggtc ccacaacgcg gcagcttcgt cgtagtcctc
      721 ccgttgggtc aggagcaggg cgaggttgaa aagcgcgtcg gcgaagttcg gttgcgcaaa
      781 ggcggcagcg cgataatgcg cgacggcggc ggtgaggcgt ccgtcgcgct cgtcgatgac
      841 cccaaggttg aaccaggcct cggcgaattc gggatcgcgc tgcaaagcct cgtaataggc
      901 gagcacggct tcgtcgcgcc ggccctgcgc gtcgagaatg ttgccgagat tgtacgggat
      961 cgccgcatcg gcgcggtcga tggccatggc gctgcggtag agcctttcgg cgcccgcgag
     1021 gtcgccgccg gcctcgcacg cctccgccgc cgcgaagacg gcgtcggcat cgccggtctc
     1081 gtgcggcaag ggcagcgcca gctggccatc gagatgggcg aagccgccgg acagctcctg
     1141 cacgatctcg ccccagggcg tctgcgccag ccgcgcctcc gacagggacc gacgcgcgcg
     1201 gcgcagggcc agcgcggctt cgacgatcgc ggccagcggg tagccgcgct cgagcaggcg
     1261 cgtcacctcg cgcgcgacga gcaggtcacg gtaggcgaag gcatcgtcga ccggttcgac
     1321 gacgtcgaac gcggcgaggc atgcgagcat gtccggcggc agccttgcgg cccgcacgag
     1381 atccgcggca cacagcgtgc gctcgcccgg cacgggcggg ggcgtgagcc ccagcatgcg
     1441 cctgaaggcg gactcgctga ccacgcgggc gccggccgtc acccccgccg gaaggaccag
     1501 cggcggcgcc gcctcgaggg cggcgcgagc gctggcgtgt gcgaacacga ccagatccac
     1561 ccgcgcgccc ggccgttccg cgaggcggcc accggcctgc tcgacgaggc gccccaggcg
     1621 cttgcgggtc acgccgtggg ggcgccccac gaccaggacc gagaaacggg gccggtcagc
     1681 catggccacg ccgagggcca ggcaggcccg gtaaggtaaa tgccaagcgg caacgagacg
     1741 ggcgccgccg tctgctacac agcgcgatgg gcgccgcggc cctctccggc ccggcgcgtt
     1801 cacaacccgt gtccggttga ctcggccgct gactcgttct gacttgcaaa gcggtcatcg
     1861 ggtcagtctg cgtaagcgtt aggggcgtaa tcatggcacc gcgtgcgaat tggaagggat
     1921 atctcaagct gtccctggtt tcctgtgaaa tcgccctcta ccccgcgacc agctcgtcgg
     1981 agcgcgtcag gttcaatcgc ctcaaccggc agaccggcaa ccgtctcaag cagctcctgg
     2041 tcgatgcgca gacggaagag ccggtcgacc gcgccgatca gatcaagggc taccaagtcg
     2101 gcaagaacag ctatgtccag gtcgaggacg aggagctcga cgcgatcaag atcgagagca
     2161 cgcacaccat cgacgtcgaa agcttcgtcg acatcgatga ggtcgacaag cgctatctcg
     2221 agacgcccta ctacatcgcg cccgaaggca gcgtcggaat cgaggcgttc acggtcatcc
     2281 gcgacgccat gcgcgacaag ggcaaagccg ggctcggccg cgtcgtgatc tcgcggcgcg
     2341 agcgcatggt gctgctcgag ccgctcgaca agggcatcct ggcgacgctg ctgcgctatc
     2401 cctacgaggt gcgcgagccc gacgaatatt tcgaagacat cccggaggtc gagatcgccg
     2461 acgagatgcg cgacctcgcc gcgcatatcg tcgagcgcaa ggcgtcgaca ttcgatccaa
     2521 gcaagttcga ggaccgctac gagaacgccg tcgtcgatct gctcaagtcc aaggaggccg
     2581 ggcggccggc gcacgtgccc gaggcgccac gtccctcgaa cgtgatcagc ctgatggacg
     2641 cgctgcgcca gagcatcgcc gccgagaagg gcggcgcccc cgcgaaagcg tcgaagccca
     2701 aggcgccgtc gaagaccagc gccgaccgcg ccaaggccaa ggagccggcg aaggagcccg
     2761 ccaagaagcc gcgcaaggcc cgcaaggcgg gctagctgcg ttcttcccct tgtcatcacc
     2821 gggcttgctg tttggcccgg tgatcccgat tgacaggaca ccggcgtttg gatcgggatg
     2881 gccggcacaa ggccggccgt gaccatgacg agcgtgaccg aaacacctgc cgagcgcgtc
     2941 acgatccgcg tcgatgatac gcgcaccgtg tcgggcttgt gggcgcgccc ggcgcaggcg
     3001 cgcgcgtgcc tcgtgctggc gcatggggcg ggcgcgggca tgacgcaccc gtcgctcgaa
     3061 acggtcgcgg cggacctgtt cgcgcggggc attgccagcc tgcgctacca gttcccgttc
     3121 atggagcagg gcacgaagcg ccccgatcct ccgcccgtcg cgcatgccgc ggtccgcgcc
     3181 gccgtggccg aggcggcgcg cctggcgccc gaccttgcgc tgttcgccgg cggccgctcc
     3241 ttcggcgggc gcatgacgtc gcaggcccag gcggcatcgc cgctgcccga cgtgcgtggg
     3301 ctcgtgttcc tcgccttccc gctgcatccg gcaaaccgcc tgtcgggcga acgcggcaga
     3361 cacctttcgg acgtgcacat cccgatgctc tttctgcagg gaacgcggga cgcgctcgcg
     3421 gagccggcgc tgcttcagcc gctgtgcaac gagctcgggg cgcgcgcgac gctaaagctg
     3481 ctcgacggcg ccgaccatgc cttccatgtt ctcgcccgtt ccggccgcac cgatgcagaa
     3541 atccggggcg aagcggt
//
LOCUS       DATAIQ010000105         5025 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_141231, whole genome shotgun sequence.
ACCESSION   DATAIQ010000105 DATAIQ010000000
VERSION     DATAIQ010000105.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 5025)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5025)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5025
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_141231"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..185)
                     /locus_tag="VHN20_01840"
     CDS             complement(<1..185)
                     /locus_tag="VHN20_01840"
                     /inference="COORDINATES: protein motif:HMM:NF014471.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015109 - chromate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015703 - chromate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromate transporter"
                     /protein_id="HEX2724542.1"
                     /translation="MDNRLVALFAVFAPLSLLSFGGGQAIVADIQHQTVDVYGFLSNQ
                     EFADLFAISRAAPGPSTL"
     gene            complement(185..760)
                     /locus_tag="VHN20_01845"
     CDS             complement(185..760)
                     /locus_tag="VHN20_01845"
                     /inference="COORDINATES: protein motif:HMM:NF014471.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015109 - chromate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015703 - chromate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromate transporter"
                     /protein_id="HEX2724543.1"
                     /translation="MDDQVRDLPAERTGSLRSVFGSFLKIGFTSFGGSAQALMHREVV
                     ERHKWLDDTAFMAGLAIAQVLPGANPVNLALYLGLKVRGTAGAVAAVLGMVIPAFCII
                     MLMGFAYRRLSGFPVTHFVLGGVAAAGVGATLSVGTKVASKLPKDLVLVAIALAVFVT
                     VGVLKWPMVPVVLVAVPLSIGFVFFSERGVR"
     gene            complement(860..2281)
                     /locus_tag="VHN20_01850"
     CDS             complement(860..2281)
                     /locus_tag="VHN20_01850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013169093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent succinate-semialdehyde
                     dehydrogenase"
                     /protein_id="HEX2724544.1"
                     /translation="MNDAPARPNFATTDPATGATGQAYPGHTPEEARALLARSHAAQR
                     QWRRTSFAERGALMRRAAEVLRQRAGEFADLMTAEMGKLRADGKAEVEKCAFNCDHFA
                     DHAEGYLARQPVDLGGPKAFVTFNPLGVVLAVMPWNFPFWQVFRFAAPTLMAGNGAVL
                     KHASNVPGCALAIAAVFHEAGFPKDLFATALVTSRDVKALIEDEHTAAVTLTGSVDAG
                     RSVASAAGAVLKKSVLELGGSDAYVVLADADVEAAAAICATARMVNAGQSCIAGKRFV
                     VVDAVRAAFEAALVAHMRSFTMGDPRAHGTRLGPLVSVRARDQIHDQVRRSVERGARL
                     LLGGEVPDRPGAWYPATVLADVRPGQPAHDEEVFGPVAAVLPAADEDEASRIANDSRF
                     GLGSGVITADLARGERIAADALEAGLSFVNDNVRSDPRMPFGGVKQSGFGRECGAFGI
                     HEFVNIKSVYVRPLEQRERVSIE"
     gene            complement(2493..2849)
                     /locus_tag="VHN20_01855"
     CDS             complement(2493..2849)
                     /locus_tag="VHN20_01855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724545.1"
                     /translation="MLIGASDGHGFRYEVIEWTDGYLVHARDVDTGVVEDAETKVFRT
                     AAVALRYADMSAAFDRLAAARIAGEPTDAHEAELGALKELYDGLSRRLGDDGMAAHVL
                     VAWHEQSSAAERRRYH"
     gene            complement(3088..3723)
                     /locus_tag="VHN20_01860"
     CDS             complement(3088..3723)
                     /locus_tag="VHN20_01860"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014133020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008379 - thioredoxin peroxidase activity
                     [Evidence IEA];
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA];
                     GO_process: GO:0098869 - cellular oxidant detoxification
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HEX2724546.1"
                     /translation="MTIRLGDVAPDFEQDSTAGPIRFHEWAGQSWVVLFSHPKDFTPV
                     CTTELGAVAKLKPEFDKRGVKVIGLSVDPLDSHRRWIGDIEETQGAALNFPLLADADR
                     KVSDLYGMIHPNANDTFTVRSVFIIDPSKKVRLTLTYPAATGRNFEELLRVIDSLQLT
                     DKFSVATPADWSQGQDVIIVPSVSDEQAKAKFPKGWTALKPYLRVTAQPEA"
     gene            complement(3754..>5025)
                     /gene="cysG"
                     /locus_tag="VHN20_01865"
     CDS             complement(3754..>5025)
                     /gene="cysG"
                     /locus_tag="VHN20_01865"
                     /EC_number="1.3.1.76"
                     /EC_number="2.1.1.107"
                     /EC_number="4.99.1.4"
                     /inference="COORDINATES: protein motif:HMM:NF007922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004851 - uroporphyrin-III
                     C-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0043115 - precorrin-2 dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0051266 - sirohydrochlorin ferrochelatase
                     activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0019354 - siroheme biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="siroheme synthase CysG"
                     /protein_id="HEX2724547.1"
                     /translation="EASDGAITLVRRDWRPEDLDEVSIALADCESAREAARFATAARI
                     RGVPVNVIDRPAFCDFQFGTIVNRSPVVIGISTDGAAPILGQAIRRRIEAILPASLGA
                     WAEAAQAIRGRLLALLPTKALRRRFWEKFVDATFDDRADDGRLAVLERLARETRLESA
                     GHRVGQVAIVGAGPGDPELLTLKAMRELQAADVIVYDRLVGAGVLELARREARRIAVG
                     KEGHGPACRQDDINELIVRLAREGHRVVRLKGGDPTIFGRAGEEVEACRAAAIPVSIV
                     PGVTTAAAAAASLNLSLTHRDVARRVQFATGHDRHGYLPADLDLAALADPKATTCLYM
                     AGRTAAHLAGKLVARGLPPRTAAVVMSNVSRPNETTLHTSVGELASGFAAPAGGPVIV
                     MIGAAMARADLPHTPASASAGLRSEPYFLEA"
BASE COUNT          791 a         1727 c         1747 g          760 t
ORIGIN      
        1 agcgtgctcg gaccgggcgc ggcgcgcgag atcgcgaaca ggtccgcgaa ctcctggttg
       61 gacaggaaac cgtacacatc gacggtctga tgctggatgt ccgcgacgat cgcctgcccg
      121 ccgccgaagg agagcaggga cagcggcgcg aagacggcga acaaagcgac aaggcggttg
      181 tccatcatcg caccccgcgc tcggagaaaa agacgaagcc gatgctgagc gggacggcga
      241 caagaacgac cggaaccatg ggccatttga ggacgccgac cgtcacgaag accgccaggg
      301 cgatcgcgac caggaccagg tccttcggga gcttggaggc gaccttggtg ccgacggaca
      361 gtgtcgcacc gacgcccgcc gcggcgacgc cgccgagcac gaaatgcgtc accgggaagc
      421 ccgagaggcg gcgataggca aagcccatca gcatgatgat gcagaatgcc gggatcacca
      481 tgccgagcac cgccgctacg gcgcccgccg tgccgcgcac cttgaggccg agatagagcg
      541 cgagattgac ggggttggcg cccggcagca cctgcgcgat cgccaggcct gccatgaagg
      601 ccgtgtcgtc gagccattta tgccgctcga ccacttcgcg atgcatgagc gcctgcgcgc
      661 ttccgccgaa cgaggtgaac cctattttca ggaacgagcc gaaaacgctc cgaagcgatc
      721 cagtcctttc ggccggcaaa tctctgacct ggtcatccat cgacgagaat ctgctccccc
      781 tgactgcccg gccttgccgc tgaatggcgg ccgcgacggt tgtccacctg cgccccgggg
      841 gtgtgcccgg gccgcgcggt cactcgatgc tgacacgctc ccgctgttcc agcgggcgca
      901 cgtagaccga cttgatgttg acgaactcgt ggatgccgaa ggcgccgcat tcgcgcccga
      961 agccggattg cttgaccccg ccgaacggca tgcgcggatc cgagcgcacg ttgtcgttga
     1021 cgaagctcag cccggcttcg agcgcgtccg ccgcgatgcg ctcgccgcgg gcgagatcgg
     1081 cggtgatcac gccggagccg agcccgaagc ggctgtcgtt ggcgatgcgg ctcgcctcgt
     1141 cctcgtccgc ggccgggagg accgcagcca ccggcccgaa cacctcctcg tcatgggcgg
     1201 gctgccccgg ccggacatcg gcgagcacgg tcgccggata ccaggcgccc ggccggtccg
     1261 gcacctcgcc gccgagcagc agccgggcgc cgcgctcgac gctgcgccgg acctggtcgt
     1321 gaatctgatc gcgcgcgcgc acgctgacta gcggcccgag cctggtgccg tgcgcccgcg
     1381 ggtcgcccat tgtaaagctg cgcatatgcg cgaccagcgc cgcctcgaag gccgcacgca
     1441 ccgcgtcgac gaccacgaac cgcttgccgg cgatgcagct ctggccggca ttcaccatgc
     1501 gggccgtcgc gcatatggcg gcggcggctt cgacatcggc gtcagccagc acgacatagg
     1561 cgtccgagcc gccgagctcg agcacggatt tcttgaggac ggcgccggca gcggaggcga
     1621 cgctgcgccc cgcatcgacg ctccccgtga gggtgaccgc ggccgtgtgc tcgtcttcga
     1681 tgagcgcctt cacgtcgcgg ctcgtcacga gcgccgtcgc gaacaggtcc ttggggaagc
     1741 cggcctcgtg aaagaccgcc gcgatggcga gcgcgcagcc ggggacgttg ctcgcatgct
     1801 tcagcacggc gccgttgccg gccatcagcg tcggggcggc gaagcggaag acctgccaga
     1861 aggggaagtt ccagggcatg accgcgagca cgacgccaag cggattgaac gttacgaaag
     1921 cctttggccc gccgaggtcg accggctggc gggcgaggta gccctcggca tggtcggcga
     1981 agtggtcgca gttgaacgcg catttttcca cctcggcctt tccgtcggcg cgcagcttgc
     2041 ccatctcggc cgtcatcagg tccgcgaact cgccggcgcg ctgccgcaac acctcggcgg
     2101 cacggcgcat cagggcgccg cgctcggcga acgaggtgcg ccgccattgc cgttgcgccg
     2161 catgcgagcg cgccagcagg gcccgcgctt cctcgggcgt atggccggga taggcttgcc
     2221 ccgtcgcccc ggtcgcgggg tctgtcgtgg caaagttcgg gcgggcgggt gcgtcgttca
     2281 tcggcggcct cctccggttc ggcacccaac tcggcaacga cgtcggggcc gggcggatgc
     2341 taccgccggc tcggccggcg atcatgcccg gcttgctgct gcgtggcgtc gcaggtggat
     2401 cgcggagcga gcgcccggat caaagcgcgg ctggcggatc gccggaacgc gcttgccgcg
     2461 aggaggctgg ccttctcgtg ggggtatcgt tcttagtgat agcggcgccg ctcggccgcc
     2521 gaggactgct cgtgccacgc gaccaggaca tgcgcggcca tgccgtcgtc gccgaggcgg
     2581 cggctgaggc cgtcgtaaag ctccttgagg gcgccgagct cggcctcgtg agcgtccgtc
     2641 ggctcacccg cgatgcgcgc cgcggcaagg cggtcgaacg ccgccgacat gtcggcgtag
     2701 cgcaaggcca ccgcggccgt gcggaagacc ttggtctcgg catcctcgac gacgcccgtg
     2761 tcgacgtcgc gcgcatgaac caggtagccg tcggtccact cgatcacctc gtagcggaag
     2821 ccgtgtccat ctgaagcgcc gatcaacatg gtgcatctcc gagaccgtta gcctcagaat
     2881 acgccctcgg gaaaggggcc aatgtgctcc ggagcacaat ccgaggagga gaagcttcgc
     2941 gtctgccttc ggtcgccagg aaatggtccg cggcccgatg gccgatgccg atcatcagcc
     3001 gaaggccggg gcttcaaaag ctcccggccc gttggcgtga ttgtaggggt gccgtcccga
     3061 tgggatcagc agcaccgcct gcgggcgcta cgcctccggc tgcgccgtga cgcgcagata
     3121 tggcttaagc gccgtccagc ccttcgggaa ttttgccttc gcctgctcgt cgctgaccga
     3181 cggcacgatg atcacgtcct gcccctggct ccagtcggcc ggggtcgcga cgctgaactt
     3241 gtccgtcagc tgaagggagt cgatgacccg caggagctcc tcgaaattac gtcccgtggc
     3301 ggccgggtag gtgagggtga gacgcacctt cttgctcggg tcgatgatga agaccgagcg
     3361 caccgtgaac gtgtcgttgg cgttcgggtg gatcatgcca tagaggtccg acacctttct
     3421 gtcggcgtcg gcgaggagcg ggaagttgag ggccgcgccc tgtgtctcct cgatgtcgcc
     3481 gatccaccgg cggtgcgagt cgagcgggtc gaccgagagg ccgatcacct tgacgccgcg
     3541 cttatcgaat tccggcttga gcttggcgac cgcgccgagc tcggtcgtgc acaccggcgt
     3601 aaagtccttc gggtgcgaga acagcacgac ccagctctgg cccgcccatt cgtgaaagcg
     3661 gatcggccct gcggtcgagt cctgctcgaa atcgggtgca acgtcgccca gtctgatcgt
     3721 catggtcatc tccagttggt tgggatcgat ggttcaggct tcgagaaagt agggctcgct
     3781 tcgcaggccc gcgcttgccg acgcaggcgt gtgcggaagg tccgcgcgcg ccatggctgc
     3841 gccgatcatc acgatcacgg gaccgccggc cggcgcggcg aagccgctcg cgagctcgcc
     3901 gacgctggta tgcagggtgg tctcgttcgg gcgcgagacg ttgctcatca cgacggcggc
     3961 cgtgcggggt ggcaagccgc gcgcgacgag cttgccggcg aggtgggccg ccgtgcggcc
     4021 agccatgtag agacacgtcg tcgccttggg atcggcgagc gcggcgagat cgaggtcggc
     4081 gggaaggtat ccatgtcggt catggccggt cgcgaactgc acgcgccggg ccacgtcgcg
     4141 atgcgtgagc gagaggttga gcgatgcggc cgcggccgcg gcggtcgtca cgcccggcac
     4201 gatggagacc gggatcgcgg cggcgcggca ggcctcgacc tcctcgccgg cccggccgaa
     4261 aatcgtcggg tcgccgccct tcaaacgcac cacccggtgt ccctcgcgcg ccaggcggac
     4321 gatcagctcg ttgatgtcgt cctgccggca cgccgggcca tgcccttcct tgccgacggc
     4381 gatgcgcctg gcttcgcggc gcgcaagctc gagcacgcct gcacctacca gacgatcgta
     4441 gacgatcacg tcggccgcct gcagctcgcg catcgccttc aacgtcagga gctccgggtc
     4501 ccccggtccg gcgccgacga tcgccacctg gccgacgcga tggcctgcgc tttcgagccg
     4561 ggtctcgcgc gcgagccgtt cgagcacggc gagacgcccg tcgtcggccc ggtcatcgaa
     4621 cgtcgcgtcg acgaatttct cccaaaaacg gcggcgaagc gcttttgtcg gaagcagcgc
     4681 caacaggcgg ccacggatcg cttgcgcggc ctcggcccac gcgccgagag aagccggcag
     4741 gatcgcctcg atccgccgcc ggatcgcctg gcccaggatc ggcgcggcgc catccgttga
     4801 gatcccgatc accacggggg accggttcac gatcgtcccg aactggaaat cgcaaaatgc
     4861 cggccggtcg atcacgttga ccggcacgcc gcggatgcgc gccgcggtcg cgaaccgcgc
     4921 cgcctcccgc gcgctttcgc aatcggccag cgcgatcgag acctcgtcca gatcctccgg
     4981 cctccagtcg cgccggacca gagtgatggc gccgtcgctg gcctc
//
LOCUS       DATAIQ010000106         1924 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_141258, whole genome shotgun sequence.
ACCESSION   DATAIQ010000106 DATAIQ010000000
VERSION     DATAIQ010000106.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1924)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1924)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1924
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_141258"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1724
                     /locus_tag="VHN20_01870"
     CDS             <1..1724
                     /locus_tag="VHN20_01870"
                     /inference="COORDINATES: protein motif:HMM:NF012688.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DNA polymerase"
                     /protein_id="HEX2724548.1"
                     /translation="CIDCVVARLVGISLAVEPNQACYIPVGHGGADLLSDAPRQLSKA
                     LVLERLKPLLEDEAVLKIGHNLKYDWVMFAKHGIALAPYDDTLVMSFDLDAGRSGHGL
                     DELAKAHFDHECIAFKSVCGTGSKQVTFDKVPIDAATEYAAEDADIALRLWLRLKPRL
                     AAEGTTRVYERVDRPLVATVGRMERRGVKVDRAYLATLSKRFSEEIAALEERIYEAAE
                     GPFTIGSTQQLGQVLYDRLGLKGGRKGKSGQYSTDVTELERLARENVPIAQLVLDWRQ
                     LTKLKSTYTDALQEQINPETGRVHTSYSLSGAQTGRLSSTEPNLQNIPIRTEIGRQIR
                     DAFVAEPGHVLMSADYSQIELRLAAHMADVPQLKEAFRAGEDIHAMTAEELFGTVDRD
                     TRGRAKTVNFAILYGISAWGLAGRLGLPKEEGKAIIERYFERFPGIRAYIDDTLAFAR
                     EHGFTRTLFGRRTHFPNIRAGNPNFRAGAERAAINAPIQGTSADLIKRAMNRMDDALA
                     GAGLDDVRMLLQVHDELLCEVPEGKEQAAADVVRAVMAGAAGPALDFDVPLDVEVGWG
                     ANWGAAH"
     gene            1721..>1924
                     /locus_tag="VHN20_01875"
     CDS             1721..>1924
                     /locus_tag="VHN20_01875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724549.1"
                     /translation="MSPAGEQGAKADLAALARGGRINFMGFVMRLIARLPFLFIAGRW
                     YGPEALGRFAYAVLIVEFGAQLAT"
BASE COUNT          338 a          634 c          666 g          286 t
ORIGIN      
        1 actgcatcga ctgcgtcgtc gcccggctgg tcgggatcag ccttgcggtc gagcccaacc
       61 aggcctgcta catcccggtc ggccatggcg gcgccgacct gctgagcgac gcgcccaggc
      121 aattgtccaa ggcgctggtg ctggagagac tgaagccact gctcgaggac gaggccgtgc
      181 tcaagatcgg ccacaacctc aagtacgact gggtgatgtt cgccaagcac gggatcgcgc
      241 tggcgcccta cgatgacacg ctggtgatga gcttcgacct cgacgccggc cgctcgggac
      301 acgggctcga cgagctggcc aaggcccatt tcgaccatga gtgcattgcc ttcaagagtg
      361 tgtgcgggac cggcagcaag caggtcactt tcgacaaggt gccgatcgac gccgccaccg
      421 aatatgccgc cgaggacgcc gacatcgcgc tgcgcctgtg gctgcggctc aagccgcggc
      481 tcgccgcaga agggacgacc cgggtctacg aaagggtcga ccggccgctg gtcgcgacgg
      541 tcggccggat ggagcggcgc ggggtcaagg tcgaccgagc ctacctcgcc accttgtcga
      601 agcgcttttc ggaagaaatc gcggcgctcg aggagcggat ctacgaggcg gccgaggggc
      661 cgttcacgat cggctcaacc cagcagctcg gccaggtgct ctacgaccgg ctcggcctca
      721 agggcgggcg caagggcaag agtgggcaat attcgaccga cgtcaccgag ctcgagcggc
      781 tggcgcgcga gaatgtgccg atcgcccagc tggtgctcga ctggcgccag ctgaccaagc
      841 tgaagtcgac ctataccgac gcgctccagg agcagatcaa cccggagacg gggcgggtcc
      901 acaccagcta cagcctgtcg ggcgcgcaaa ccgggcgatt gagctcaacc gagccgaacc
      961 tgcagaacat cccgatccga accgagatcg gccgccagat ccgcgacgcg ttcgtcgccg
     1021 agccgggcca tgtgctgatg agcgccgact atagccagat cgagcttcgc ctggcggcgc
     1081 acatggctga cgtgccgcaa ttgaaagagg cattccgggc cggcgaggac atccacgcga
     1141 tgaccgccga ggaactgttc ggaaccgtcg accgcgacac ccgcgggcgg gccaagacgg
     1201 tcaacttcgc catcctctac ggcatttcgg cctgggggct ggccgggcga ctcggcttgc
     1261 ccaaggagga aggcaaggcg atcatcgagc gctatttcga gcgcttcccg ggcatccgcg
     1321 cctatatcga cgacacgctc gccttcgccc gcgagcacgg tttcacccgc accctgttcg
     1381 gccgcaggac ccattttccc aacatccgcg ccggcaaccc caatttccgc gccggggccg
     1441 agcgggcagc gatcaacgcg ccgatccagg gcaccagcgc agacctcatc aagcgggcga
     1501 tgaaccgcat ggacgatgcc ttggccgggg ccgggctcga cgacgtgcgg atgctgcttc
     1561 aggtccacga cgaattgctg tgcgaggttc ccgagggaaa ggagcaggcc gcagccgatg
     1621 tcgtccgggc ggtgatggcg ggagcggccg gaccggcgct cgatttcgac gtgccgcttg
     1681 acgtcgaggt cggctggggc gccaactggg gcgccgcgca ttgagcccgg cgggggaaca
     1741 gggggccaag gccgacctcg ccgcgctggc ccgcggcggg cggatcaact tcatgggctt
     1801 cgttatgcgc ctgatcgcgc ggctgccgtt cctgttcatc gccgggcgct ggtacgggcc
     1861 ggaggcgctg gggcggttcg cctatgcggt tctgatcgtc gaattcgggg cgcagctggc
     1921 gacg
//
LOCUS       DATAIQ010000107         1898 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_421229, whole genome shotgun sequence.
ACCESSION   DATAIQ010000107 DATAIQ010000000
VERSION     DATAIQ010000107.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1898)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1898)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1898
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_421229"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..456)
                     /locus_tag="VHN20_01880"
     CDS             complement(<1..456)
                     /locus_tag="VHN20_01880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018240174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease subunit"
                     /protein_id="HEX2724550.1"
                     /translation="MNVQRFLHTIDDISTWLGKAAAWLIMGLMLLVCAEVFKRYILNA
                     PTAWIFDASHMLYGTLFMLAGAYTLAQNAHVRGDFLYSSMRPRTQAALDLVLYFVFFL
                     PGILALIYAGYRFAALSWRIGEHSSVTAEGPPIYHFKSIIPLAGALIILQ"
     gene            complement(546..1691)
                     /locus_tag="VHN20_01885"
     CDS             complement(546..1691)
                     /locus_tag="VHN20_01885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011976074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HEX2724551.1"
                     /translation="MTKSKAPAGENTSRRKFLQVAGAGAAATVAVPAVVKAQGPVSMR
                     WQSTWPSKDIFHEYATDFAKKVNDMTGGDLRIEVLPAGAVVPAFGLLDAVSSGTLDGG
                     HGVCVYHYGKQPALALWGSGPGFAMDANMLLAWHKYGGGKDLLDKIYSSIGANVVSFL
                     YGPMPTQPLGWFKKPVTRVEDIKGLKFRTVGISIDVFTGLGLAVNALPGGEIVAAMDR
                     GLLDAAEFNNASSDRALGFADVSKTCMLQSYHQNAEQFEILFNKTKYNGLPDRMRAII
                     ANAVEAASQDMAWKAIDRYSKDYVELQAKDGVRFYKTPDAILKRQLEVYDEVAKKYAG
                     QNPLFKEIMQSQIAYAERVTRWEQDTVVSRRMAFDHYFGKDGAAKKL"
BASE COUNT          338 a          577 c          629 g          354 t
ORIGIN      
        1 ctggaggatg atgagcgccc ccgccagcgg gattatcgac ttgaagtggt agatcggcgg
       61 gccctctgcc gtgacgctcg aatgctcgcc gatgcgccac gacaaggcgg cgaagcgata
      121 gccggcgtag atgagcgcca ggatgcccgg aaggaagaaa acgaaataga gcacgaggtc
      181 gagcgcggct tgcgtgcgcg gacgcatcga actgtagaga aagtcgccgc gcacgtgagc
      241 gttctgcgcc agcgtgtagg cgccggcgag catgaacaac gtgccgtaca gcatgtggct
      301 tgcgtcgaag atccatgccg tcggtgcgtt gaggatatac cgcttgaaca cctcggcgca
      361 gaccaggagc atgagcccca tgatgagcca tgccgcggcc ttcccgagcc aggtgctgat
      421 gtcgtcgatg gtgtgcagga agcgctggac gttcatgcgc ggcagcaatt cgctggaggg
      481 gagagaatag cacaacgcac cattcggtca cactccgaat ggtgctttgc aggactcgag
      541 gacggtcaga gcttcttggc ggcgccgtcc ttgccgaaat agtggtcgaa cgccatgcgc
      601 cggctcacga ccgtatcctg ttcccagcgc gtgacgcgct cggcgtaggc gatctgcgat
      661 tgcatgatct ccttgaacag cggattctgg ccggcgtatt tcttggcgac ctcgtcatag
      721 acttcgagct ggcgcttcag gatcgcgtcg ggcgtcttgt agaagcggac gccatccttc
      781 gcttgcagtt cgacgtaatc cttcgagtag cgatcgatcg ccttccaggc catgtcctgg
      841 ctggccgcct cgacggcgtt ggcgatgatc gcccgcatgc ggtccggaag gccgttgtat
      901 ttcgtcttgt tgaacaggat ctcgaactgc tcggcattct ggtgatagct ctgcagcata
      961 caggtcttcg acacgtcggc gaagccgagg gcccggtcgg acgaggcgtt gttgaactcg
     1021 gccgcgtcga gaaggccgcg gtccatggcc gccacgatct cgccgcccgg caacgcgttc
     1081 accgcgaggc cgagaccggt aaacacgtca atcgagatgc cgacggtgcg gaacttgagg
     1141 cctttgatgt cctcgaccct cgtgaccggc ttcttgaacc agccgagcgg ctgggtcggc
     1201 atcgggccgt agaggaacga caccacgttg gcaccgatcg acgaatagat cttgtcgagg
     1261 aggtccttgc cgccgccgta tttgtgccag gccagcagca tgttggcgtc catggcgaag
     1321 cccgggcccg atccccagag ggcgagggca ggctgcttgc cgtagtgata gacgcacacg
     1381 ccatggccgc cgtcgagggt gcccgacgag accgcgtcga gcaggccgaa ggccggtacc
     1441 acggcgcccg cgggcagcac ctcgatgcgc aggtcgccgc cggtcatgtc gttgaccttc
     1501 ttggcgaaat cagtggcgta ttcgtggaat atgtccttcg agggccacgt gctctgccag
     1561 cgcatgctga ccggcccttg cgccttgacg acggccggca ccgccacggt cgcggcggca
     1621 ccggcgccgg caacctgcag gaatttgcgg cgcgaggtgt tctcccccgc cggggccttg
     1681 gatttcgtca ttgtcgatcc tcccagtcgc gcgggatcgt tcgccgaccc gcgtcaaaag
     1741 agggcgtaag gtaacgacgt tttcgggacg aaattcaaga ggggccaagg gaacttcgcc
     1801 cccgtctttc ggctaaggca tcaattgtct gtgttttgcg ccgagggccc cgaggctgcg
     1861 gcatcctctc ccatcccggc ctcgggcgcc ggcggttg
//
LOCUS       DATAIQ010000108         1637 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_282912, whole genome shotgun sequence.
ACCESSION   DATAIQ010000108 DATAIQ010000000
VERSION     DATAIQ010000108.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1637)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1637)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1637
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_282912"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1059
                     /locus_tag="VHN20_01890"
     CDS             <1..1059
                     /locus_tag="VHN20_01890"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX2724552.1"
                     /translation="HADEWPADIVAGMREMGLFGCIIREEYGGLGLSASTYAKVVERI
                     ARVWMSVSGIINSHLIMAACVQRNGTVAQRQHFLPRFASGELRGGLALTEPDCGTDLQ
                     AVRTVARRDGDHYVINGTKTWISNGIHGQVFAVLVKTDPEAQPRHRGMSLFICEKGPG
                     FTSTKKLEKLGYKGIDSAELVFDNFRVPAANLVGGVEGQGFKHVMGGLELGRINVAAR
                     GVGVARACLEESVAYAQLRRTFGKPICEHQAIQLKLADMATRAEAARLLVEQAARAYD
                     AGQRCDMEAGMAKLFASEAAVENSMEALRIHGAYGYSKEMNVERYYRDAPLLCIGEGT
                     NELQRLIISAQLVERSPI"
     gene            1120..>1637
                     /locus_tag="VHN20_01895"
     CDS             1120..>1637
                     /locus_tag="VHN20_01895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010683956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX2724553.1"
                     /translation="MNNLLSAFRFAALPAGTNSFRAEVKAFLQSSFEPMPADIRARSW
                     MGFNAAFSKKLAARGWVGVTLPAQYGGASLDAFSRFVLVEELLAAGAPVSAHWIADRQ
                     SGPLILKFGTEAQRQFYLPKICAAEAFFCIGMSEPNAGSDLASVGTRATRCQIDGSSG
                     WRLNGRKIWTTNA"
BASE COUNT          284 a          521 c          545 g          287 t
ORIGIN      
        1 catgccgacg aatggccggc cgacattgtg gccggcatgc gcgagatggg cctgttcggc
       61 tgcatcatcc gcgaggagta cggcggcctg ggcctgtcgg ccagcaccta tgccaaggtg
      121 gtggagcgca tcgcgcgggt ctggatgtcg gtgtcgggca tcatcaactc gcacctcata
      181 atggccgcct gcgtgcagcg caacggcacc gtggcgcagc gccagcattt tttgccgcgc
      241 tttgccagcg gcgaactgcg cggcgggttg gcgctgaccg agcccgattg cggcaccgac
      301 ttgcaggcgg tgcgcacggt ggcgcgccgc gacggcgacc attacgtcat caacggcacc
      361 aagacctgga tatccaacgg catccatggc caggtctttg ccgtgctggt caagaccgac
      421 cccgaagcgc aaccgcgcca tcgcggcatg agcctgttca tctgcgagaa gggcccgggc
      481 ttcacgtcca ccaagaagct ggaaaagctc ggttacaagg gcatcgacag cgccgagctg
      541 gtgttcgaca actttcgcgt gccggccgcc aacttggtcg gtggcgtgga gggacagggt
      601 ttcaagcacg tgatgggcgg actggaactt gggcgcatca atgtggctgc gcgcggcgtg
      661 ggtgtggcgc gcgcctgcct ggaggagtcg gtagcctatg cccaactgcg tcgcaccttc
      721 ggcaagccga tctgcgaaca ccaggcgatc caactcaagc tggccgacat ggccacccgg
      781 gcggaggcgg cgcgtctgct ggttgaacag gccgcgcggg cttatgacgc cggccagcgt
      841 tgcgacatgg aagccggcat ggccaagctg ttcgccagcg aggcggcggt cgagaactcg
      901 atggaggcct tgcgcatcca cggggcttat ggctactcga aggaaatgaa tgtcgagcgc
      961 tactaccgcg atgcgccgct gctgtgcatc ggcgagggca ccaacgaatt gcagcgcctg
     1021 atcatttccg cccagctggt ggagcgcagc ccgatctgat gtatcgcctg gggcggcgcc
     1081 tcaactcggc ggtgaatgaa cccctcggag gaaaatttct tgaacaacct gctgtccgct
     1141 ttccggttcg ccgccctgcc cgccgggacg aattcatttc gcgccgaggt gaaggccttt
     1201 ctccaatcca gttttgagcc aatgcccgcc gacatccggg cccgttcatg gatgggtttc
     1261 aatgccgctt tcagcaagaa gctggccgca cggggctggg tcggcgtgac cttgccggcg
     1321 caatacggtg gcgccagcct ggacgccttc tcgcgcttcg tgctggtgga agaactgctg
     1381 gccgccggcg ccccggtttc cgcgcactgg atcgccgacc gccagagcgg gcccttgatc
     1441 ctcaagttcg gcacggaggc gcaacgccag ttctacctgc cgaaaatctg cgccgccgag
     1501 gcgtttttct gcatcggcat gagtgagccc aatgccggct ccgacctcgc cagcgtcggc
     1561 acgcgggcca cgcgctgcca aattgacggt tcaagcggct ggcggctgaa cggccgcaag
     1621 atatggacca ccaacgc
//
LOCUS       DATAIQ010000109         2750 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_141289, whole genome shotgun sequence.
ACCESSION   DATAIQ010000109 DATAIQ010000000
VERSION     DATAIQ010000109.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2750)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2750)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2750
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_141289"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..422)
                     /locus_tag="VHN20_01900"
     CDS             complement(<1..422)
                     /locus_tag="VHN20_01900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724554.1"
                     /translation="MPACAAERSCRSQFRLGATAAAAVALALLAGTATAATSMRATPS
                     ASVPAPPPRPDTLEPSSRRSPGASLAQAEIPAPPPRPSDLEERTAKPTAADTTLPEES
                     ACLERLTKLGVRFEALPAISAGQCGAAHPLRVSAVASTL"
     gene            complement(403..858)
                     /locus_tag="VHN20_01905"
     CDS             complement(403..858)
                     /locus_tag="VHN20_01905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018114583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0120225 - coenzyme A binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HEX2724555.1"
                     /translation="MMPASQSAARGVSHGAYAPDHLRDLLTSARTIAVVGASNEPWRP
                     SFGIMRYLQRAGYRIVPVNPFLVGQTVHGEAFQPSLRELRETVDLVNVFRRSDAIEGV
                     VDDAIAAAAPALWMQLGIRNDAACAKAEAAGIAVVMNRCISVEHARLCR"
     gene            1092..2024
                     /locus_tag="VHN20_01910"
     CDS             1092..2024
                     /locus_tag="VHN20_01910"
                     /inference="COORDINATES: protein motif:HMM:NF024376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate/phosphite/phosphonate ABC transporter
                     substrate-binding protein"
                     /protein_id="HEX2724556.1"
                     /translation="MKVVKRFVRGALAAAAALALASGSTGLRAETLVIGSVGKDVKTE
                     IKDLAPLAKYLEKELASVGIDKVEVLIVPTAARIVDAFRAGQVQLYPESPLVAAKVAR
                     QTGAVPLVRRWRKGLGEYWSEIVVNSDAPITSLEDLRGRVIAFEDPDSTSGHLLPRAM
                     LLEGGLKIQNLKKPDEPVAPDSIGAIFTQGDRSSILALLDGRVAAIATDPHYVKMVEK
                     ERPGAVRSIARSISVPRQVVMRTGTMPAAMAQKIADVLLAMEHSEDGRAVLKEFGKTD
                     RFDAFPQDPQATFAALYAQLRLLDADPVLAPPTQ"
     gene            2052..>2750
                     /locus_tag="VHN20_01915"
     CDS             2052..>2750
                     /locus_tag="VHN20_01915"
                     /inference="COORDINATES: protein motif:HMM:NF012876.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HEX2724557.1"
                     /translation="MRPGRLRKWSERLTVRATAYVALTIVMFAGLGVLLNINEGRDVI
                     LERLMTRAEDLGTFVADLAGSHVAELNAFELEVILEEVTRQRDVKLAEIIDPKGHVIA
                     DSRKGKFLRKSGSAVVIQALASQQKVIAHDEQFIEAAIPVVVGDKFQGLVYLRVSLDG
                     LWSAVAHLTQRYISLAVALIGIAIPLAAFFMARATGQIRRVTNAVRQITDGDLDFEFA
                     ETAPGEVGELQNAFN"
BASE COUNT          465 a          879 c          956 g          450 t
ORIGIN      
        1 agcgtgctcg cgaccgccga gacgcgcagc gggtgcgccg cgccacattg tccggcagag
       61 atggcgggga gggcctcgaa gcggacgccg agcttggtga ggcgctcaag gcaggcgctc
      121 tcctcgggca gcgtcgtgtc agcagcggtc ggcttggccg tgcgttcttc aaggtcgctc
      181 gggcgcgggg ggggagcggg gatctccgct tgcgccagcg aggcgccggg cgatctgcgc
      241 gaggacggct cgagcgtatc cggccgcggc ggcggcgccg gaacgctcgc gcttggcgtg
      301 gcccgcatgc tggtggccgc ggtggccgtg ccggcgagca gcgcgagcgc aactgcggcg
      361 gccgccgtgg cgccgaggcg aaattgcgag cggcagctgc gctcagcggc acaagcgggc
      421 atgttccaca ctgatgcacc ggttcatcac gaccgcgatg ccggcggcct cggccttggc
      481 gcaggcggcg tcgttgcgga tgccgagctg catccagagc gccggcgcag ccgccgcgat
      541 ggcgtcgtcc acgacgccct cgatcgcgtc ggaccggcgg aagacgttga cgaggtcgac
      601 ggtctcccgg agttcgcgca acgagggctg gaacgcctcg ccgtgcacgg tctggccgac
      661 gaggaacgga ttgacgggaa cgatgcggta cccggcgcgc tgcagatagc gcatgatgcc
      721 gaagctcggc cgccacggct cattgctggc gccgacgacc gcgatcgtcc tggcgctcgt
      781 caggagatca cgcaggtggt ccggcgcata ggcgccgtgg ctcaccccac gcgccgcaga
      841 ttgtgaagcc ggcatcatgc ctgcgtcctg acgttgtctg gaccgcaagc gcggctgtcg
      901 ggaccggccg ccatgacgcc ctcctggaac cagggttaat gaaagataaa gcaggagggg
      961 ggcccgggtt ccttacgacc tggttgcgaa gctcgtcgaa accgagcgag gccggcgggc
     1021 cgaaatttta acaagttcgt gcaaggcttt gagccgtttc agggaaacat tctgctcgcc
     1081 ggagaaagca gatgaaggtg gtcaaacgat tcgtgcgcgg tgctctcgcg gctgccgccg
     1141 ccctggcgct cgcgtcgggt tcgactggcc tgcgcgcgga gaccctggtc atcggatccg
     1201 tcggcaagga cgtgaaaacc gaaatcaagg acctcgcgcc tctggccaaa tatctcgaga
     1261 aggagctcgc gtccgtcggc atcgacaagg tcgaggtcct catcgtcccg acggcggcgc
     1321 ggatcgtgga cgccttccgg gccggccagg ttcaactgta cccggaaagt cccctggtcg
     1381 cggccaaggt cgcacggcaa acgggcgccg tgccgcttgt gcggcgctgg agaaagggcc
     1441 ttggggaata ttggagcgag atcgtcgtca atagcgacgc gcccatcacg tcgctcgagg
     1501 acctgcgcgg cagggtgatc gcctttgagg acccggattc gacgtccggc cacctgctgc
     1561 cgcgggccat gcttctggag ggcggcctaa agatccagaa cttgaaaaag ccggacgagc
     1621 ccgtcgctcc ggacagcatc ggcgccatct tcacacaagg cgaccgctca tccatcctcg
     1681 cgctgctgga cggccgcgtg gcagccattg cgaccgatcc gcactacgtg aagatggtcg
     1741 agaaggagcg gcccggggcc gtgcgctcga tcgcgcgttc gatcagcgtg ccgcgtcagg
     1801 tcgtgatgcg caccggcacg atgcctgctg caatggcgca gaagatcgcc gacgttctgc
     1861 ttgccatgga gcacagcgag gacgggcgag cggtgctcaa ggagttcgga aaaactgatc
     1921 ggttcgacgc cttcccgcaa gatccgcaag cgaccttcgc ggcgctttac gcgcagctcc
     1981 ggcttctcga cgccgatccc gttctcgccc cgccgacgca gtaggaccgc cgtacggtgg
     2041 cgtgacgcct catgagacct ggtcgcctcc gcaagtggag cgagcgtctg acagtcaggg
     2101 cgacggccta cgtcgccctg accattgtca tgttcgcggg gcttggcgtc ctcctcaaca
     2161 tcaacgaggg gcgcgacgtc atcctcgagc gactcatgac gcgcgcggag gatttgggca
     2221 ctttcgtcgc cgacctggcg ggaagccatg ttgcggagct gaatgcgttc gagctggaag
     2281 tgatcctcga ggaggtgacc cgacagcgcg acgtcaagct cgcggagatc atcgacccga
     2341 aggggcacgt catcgccgac agtcgtaagg gcaagttcct ccgcaagtcg ggtagcgcgg
     2401 tcgtcattca ggcgctggcg agtcagcaga aggtaatcgc gcacgacgag cagttcatcg
     2461 aggctgccat tccggtcgtc gtcggcgaca aattccaggg gctcgtttat cttcgcgtct
     2521 cgctcgatgg cctgtggagc gcggtggcgc atctcacgca gcgctacatt tctctcgccg
     2581 ttgcgctgat cggcatcgcc attccgctcg ctgccttctt catggcgcgg gcaaccggcc
     2641 agatccgccg cgtcacgaac gcggtgcggc agatcaccga cggcgacctc gatttcgaat
     2701 tcgccgagac cgctcccggc gaagtcggcg agcttcagaa cgcgttcaat
//
LOCUS       DATAIQ010000110         3068 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_282958, whole genome shotgun sequence.
ACCESSION   DATAIQ010000110 DATAIQ010000000
VERSION     DATAIQ010000110.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3068)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3068)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3068
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_282958"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1039
                     /locus_tag="VHN20_01920"
     CDS             <1..1039
                     /locus_tag="VHN20_01920"
                     /EC_number="1.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013502160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NAD-dependent succinate-semialdehyde
                     dehydrogenase"
                     /protein_id="HEX2724558.1"
                     /translation="VVIRQPIGVVAAITPWNFPAAMITRKVAPALAAGCTAVVKPAGE
                     TPLTALALAVLAERAGIPPGVLNILTGKSAEIGKVMSEHPTVRLLGFTGSTEIGKLLM
                     RQAASTVKKVALELGGNAPFIVFDDADVDAAVEGAIASKFRNMGQTCVCANRIYAQDG
                     VYDDFVSKLAKKVIDLKVGNGAEVGVNQGPLITMDAVEKVERHIADAVGQGARVVVGG
                     KRHSLGRTFFEPTVLANVTTRMLITREETFGPVAPVYRFTDEQDVIDQANATEYGLAA
                     YFYARDLGRVFRVAEGLEYGMVGVNTGAISTEVAPFGGVKESGIGREGSHHGMEEFVE
                     LKYMLLAGLDR"
     gene            1036..1734
                     /gene="rpiA"
                     /locus_tag="VHN20_01925"
     CDS             1036..1734
                     /gene="rpiA"
                     /locus_tag="VHN20_01925"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018259564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004751 - ribose-5-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0009052 - pentose-phosphate shunt,
                     non-oxidative branch [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-5-phosphate isomerase RpiA"
                     /protein_id="HEX2724559.1"
                     /translation="MSADDLKRAAAGRAAALVGDGMRLGLGTGSTAAHFVALLGERVR
                     QGLEVIGVPTSEATRRQAEREGIPLTTLDETPELDLTVDGADELDDELHLIKGGGGAL
                     LREKIVAAASRRMIVIADGSKWVMRLGRFPLPIEVVPFGLRATERGVQAAVRKAGCEG
                     ELHLRRGADGEPFLTDGGHYILDAHLGQIDDPRALAAALAAVPGVVEHGLFLGLATGA
                     ILATEAGLVELGKL"
     gene            1763..2323
                     /locus_tag="VHN20_01930"
     CDS             1763..2323
                     /locus_tag="VHN20_01930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015931170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2059 domain-containing protein"
                     /protein_id="HEX2724560.1"
                     /translation="MIFSRYRLAACIVAITAAGAAHAQQRPAPAPAPAAPAPAQPGAA
                     PRIFTDSHIALGRELAVLAGVTAAFDRIMPQFTAQIRQVTVTRPELAKDLDQVLDALK
                     PELEQQKQEMITATARIYAAALTEAELKDVVTFFKTPAGRKYLDVTPRTLDQVAAEMQ
                     RWAERLSQSVMGRVRTEMEKRGHQLQ"
     gene            complement(2379..>3068)
                     /locus_tag="VHN20_01935"
     CDS             complement(2379..>3068)
                     /locus_tag="VHN20_01935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HEX2724561.1"
                     /translation="GAEIPTFLSYATEKRLTKYPEEFGRGAIEGVAGPEAANNASAAG
                     TLVPLLTLGLPTSATAAMMLAGFQQYGLNPGPLLFADKPELVWGLIGSLYIANVMLLI
                     LNLPLVGLWVRLLAIPQPWLYAGILVFATMGTIAAKPSVVELTMLGAFGVLGYLMRRY
                     DYPIAPVVVGLILGPVAESQLRRALSISLGDPLVLVQSPMSATLLAIALFALVAPFVM
                     RGLARFKAAED"
BASE COUNT          516 a         1007 c         1079 g          466 t
ORIGIN      
        1 cgtcgtgatc cggcaaccca tcggggtggt tgctgcgatc acgccatgga attttccggc
       61 cgcgatgatc acccgcaagg tggcgccggc cctggccgcc gggtgcacgg cggtggtcaa
      121 gccagccggc gagacaccgc tgacggccct ggcgctcgcc gtcctggccg agcgcgcggg
      181 catccccccc ggggtgctca acatcctcac cggcaagtcg gccgagatcg gcaaggtgat
      241 gagcgagcat ccgaccgtgc gcctgctcgg cttcaccggt tcgacggaga tcggcaagct
      301 gctgatgcgt caggccgcgt cgacggtgaa gaaggtcgcc ctggagctgg gcggcaatgc
      361 acctttcatc gtgttcgacg atgctgatgt cgatgcggcg gtggagggcg ccatcgcctc
      421 gaagttccgc aacatgggcc agacctgcgt ctgcgccaac cgcatctacg cccaggacgg
      481 cgtctacgac gacttcgtct cgaagctcgc caagaaggtc atcgatctca aggtcggcaa
      541 cggcgccgag gtcggcgtca accagggacc gctgatcacg atggacgcgg tcgagaaggt
      601 cgagcggcac atcgccgacg cggtcgggca gggcgcccgg gtggtggtcg gcggcaagcg
      661 tcactccctc ggccgcacgt tcttcgagcc gaccgtgctc gccaacgtca cgacccggat
      721 gctgatcacg cgcgaggaga cctttggccc cgtcgccccg gtctatcggt tcacggacga
      781 gcaggacgtg atcgaccagg ccaacgcgac cgaatacgga ctcgccgcct acttctacgc
      841 ccgcgatctc ggtcgggtgt tccgcgttgc cgaagggctc gaatacggca tggtcggcgt
      901 caacaccggc gcgatttcga ccgaggtggc gccgttcggc ggtgtcaagg agtcgggcat
      961 cggccgcgaa ggctcgcatc acggcatgga ggagttcgtc gagctcaaat acatgctgct
     1021 cgccgggctc gaccgttgag cgccgatgat ctgaagcgtg ccgccgccgg gcgtgcggcg
     1081 gcgctcgtcg gcgacggcat gcggcttggc ctcggcacgg gctcgaccgc ggcccatttc
     1141 gtcgccttgc tcggggagcg ggtcagacaa ggtctcgagg tcatcggcgt gccgacttcg
     1201 gaagcgaccc gccgtcaggc ggagcgggag ggcattccgc tgacgaccct cgatgagacg
     1261 ccggagctcg acctcacggt cgacggcgcc gacgagctcg acgacgaact gcacctgatc
     1321 aagggcggcg gcggcgctct gctgcgtgaa aagatcgtcg cagcggcgag ccggcgtatg
     1381 attgtgatcg cggatggctc gaaatgggtg atgcggcttg gtcgctttcc attgccgatc
     1441 gaggtcgtgc cgttcggact gcgcgcgact gagcggggcg ttcaggctgc ggtgcgcaaa
     1501 gccggctgcg agggcgaact gcaccttcgt cgcggcgccg acggcgagcc attcctcacg
     1561 gacggcggcc attacattct cgacgcccat ctcgggcaga tcgatgaccc gcgggcactg
     1621 gcggcggcgc tggccgcggt tcccggcgtg gtcgagcacg gattgttcct cggccttgcc
     1681 acgggcgcca ttctggcgac ggaggctggg cttgtggagc ttgggaagct atgagcctca
     1741 ccagacctct ggagcctgtc cgatgatttt ctctcgctac cgtctcgccg cgtgcatcgt
     1801 ggccatcacc gccgccggtg ccgctcatgc gcaacagagg ccggctcccg ccccggcccc
     1861 ggcagctccc gcccccgcgc agccgggggc ggcgccgcgc attttcacgg acagccacat
     1921 cgccctcggc cgcgaactcg cggtcctcgc gggcgtgacg gccgccttcg accgcatcat
     1981 gccgcagttc accgcgcaga tccgccaagt gaccgtgacg cgcccggaac tcgccaagga
     2041 tctcgatcag gttctcgacg ccctgaagcc cgagctcgag cagcagaagc aggaaatgat
     2101 cacggccacg gcgaggattt acgccgcggc cctgaccgag gctgagctca aggacgtcgt
     2161 gaccttcttc aagaccccgg cggggcggaa gtatctggac gtcacgccga ggaccctcga
     2221 ccaggtggcc gccgagatgc agcgttgggc cgaacgtctc tcccagtccg tcatgggacg
     2281 ggtgcggacc gagatggaga aacgcggcca ccagctgcaa tgaaggcctg acgcaatcaa
     2341 gcctgcggcg gcgcgaaggc cgcggcaggc ttgcgcgttc aatcctccgc ggccttgaag
     2401 cgcgccagcc cgcgcatcac gaaaggcgcc accagggcga acagagcgat ggcgaggagg
     2461 gtggccgaca tcgggctttg cacgagcacg agcggatcgc ccaggctgat cgaaagcgcg
     2521 cgccggagct ggctctcggc gacggggccg aggatcaggc cgacgacgac gggcgcgatc
     2581 ggatagtcat agcggcgcat caggtagccg agcacgccga aggcgccaag catggtgagc
     2641 tcgacgacgg agggcttggc cgcgatcgtg cccatggtcg cgaagacgag aatgcctgca
     2701 tagagccacg gctgcgggat cgccaggagc cgcacccaaa ggccgacgag cggcaggttg
     2761 aggatcagca gcatgacgtt ggcgatgtag aggctgccga tcaggcccca gacgagctcc
     2821 ggcttatcgg cgaacagcag cggccccgga ttgagcccgt attgctggaa gccggccagc
     2881 atcatcgccg cggtcgccga ggtcggcagg ccgagcgtga gaagcggaac gagggtgccg
     2941 gcggcggagg cgttgttggc cgcctccggg cccgctacgc cctcgatggc gccgcggccg
     3001 aactcttccg gatatttggt cagccgcttt tcggtcgcat aggaaaggaa ggtcgggatc
     3061 tcggcgcc
//
LOCUS       DATAIQ010000111         2296 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_282970, whole genome shotgun sequence.
ACCESSION   DATAIQ010000111 DATAIQ010000000
VERSION     DATAIQ010000111.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2296)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2296)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2296
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_282970"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..237
                     /locus_tag="VHN20_01940"
     CDS             <1..237
                     /locus_tag="VHN20_01940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724562.1"
                     /translation="VRWPIVAAAVGTATIFAGAIRLDPRVRIWPAAVAVALCGILLTL
                     LLGIARRAEKNKYADIVSDGIIQGRSGETYGQER"
     gene            221..802
                     /locus_tag="VHN20_01945"
     CDS             221..802
                     /locus_tag="VHN20_01945"
                     /inference="COORDINATES: protein motif:HMM:NF016895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HEX2724563.1"
                     /translation="MGKSDEGEFELVLGNRQLLSFFFVVVVLLSVSFTVGYVVGRNSS
                     PSELGTRQNEPLPEVRPAEDREPVPALHPTADPPPVETTSASSRDSQPSMTVIPSRSA
                     ARQVEAAPPTGTITQPLPGQRYLQVIALARPEAEVLSEVLNKKGFRSVVAPGPDEKLF
                     RVLVGPGRDDAELARLKGELEHAGFKGAFPKRY"
     gene            807..1721
                     /gene="lipA"
                     /locus_tag="VHN20_01950"
     CDS             807..1721
                     /gene="lipA"
                     /locus_tag="VHN20_01950"
                     /EC_number="2.8.1.8"
                     /inference="COORDINATES: protein motif:HMM:TIGR00510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016992 - lipoate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0009107 - lipoate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HEX2724564.1"
                     /translation="MGADLVQLERAQPRLPEWLRKGSTHFESVTLLKRDLRRLHLHTV
                     CESARCPNIHECFHRGAATFMILGNLCTRGCGFCSVPKGSPEKREFTLDPDEPRNVAA
                     MAAQMQLRYVGITSVNRDDLPDGGSTHFAETVAEVRRALPEARVEVLTPDFCGDLDAV
                     ARVLDAGPHVFNHNMETVARLYRRVRPQANYRQSLDVLAFAKRHRPHVMAKSGLMVGL
                     GERPHEVEQLLSDLHAHDVDVATIGQYLQPTRRNLRVAEYVTPAQFDAYRDFGLGAGL
                     KMVFSGPFVRSSYMADLVSEGRSPASRC"
     gene            1715..>2296
                     /locus_tag="VHN20_01955"
     CDS             1715..>2296
                     /locus_tag="VHN20_01955"
                     /inference="COORDINATES: protein motif:HMM:NF039484.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724565.1"
                     /translation="MLNWLLAALSGLLLVFIHPRFDFVWLAPVAVAPIAFALAREPRL
                     KRRFLLGYACGLVFWAGINYWIQFVMSVHGKLGPAGGWAAFVLFCFLRAVPLGLFALA
                     ARPLLSTRFAVPLTAALWVAMERIPWLFNYTWLLLGNAGIDMAIPMRLAPFTGVYGLS
                     FVFAATGVALALIALRRPRAHTAWMLGVVLLFGL"
BASE COUNT          339 a          823 c          696 g          438 t
ORIGIN      
        1 gtccggtggc ccattgtcgc cgccgccgta ggcacggcca ccatcttcgc cggtgccatc
       61 cgcctcgacc cgcgcgtccg catctggccg gctgccgtcg cggtcgccct ctgcggcatc
      121 ctgctgacgc tgctgctcgg catcgcccgg cgcgcagaaa aaaacaaata cgccgatatt
      181 gtttctgacg gtataatcca ggggagatcc ggcgaaacct atgggcaaga gcgatgaggg
      241 ggagtttgaa ctcgtgctgg gcaaccgcca gctattgagc tttttcttcg tggtcgtggt
      301 gctgttgagc gtatcgttca cggtcggcta tgtcgtcggc cggaactcgt cgccgtccga
      361 attgggcact cgccagaacg agccgttacc cgaagtccgg cccgccgagg accgtgagcc
      421 tgtgccggcc ctgcacccca cagccgaccc gccgcctgtc gaaacgacct ctgcgtccag
      481 ccgtgactcg cagccttcga tgacagtgat tccgtcgcga tcggcagccc gccaggtgga
      541 agccgcacct cccaccggca ccatcacgca gccgctgccg gggcagagat acctgcaggt
      601 catcgcactg gcgcgtcccg aggccgaagt gctttccgaa gtgctcaaca agaagggctt
      661 ccgctcggtc gtggcccccg gtccggatga aaagctcttt cgcgtcctgg tcggtcccgg
      721 ccgtgacgac gccgaactcg cgcgcctcaa aggcgaactc gagcacgccg gcttcaaggg
      781 cgcattcccc aagcgatact gagtatgtgg gagccgatct cgtccaactc gagcgcgccc
      841 agccgcgctt gcccgagtgg ctgcgcaagg gaagcacgca ctttgaatcc gtcacgctgc
      901 tgaagcgcga cctgcgccgc ctccatctcc ataccgtctg cgaatccgcc cgctgcccga
      961 atatccacga gtgcttccac cgcggcgcgg ccacgttcat gatcctcggc aacctgtgca
     1021 cccgtggatg cggcttctgc tcggtcccca agggctctcc ggaaaagcgc gagttcacgc
     1081 tcgacccgga tgaaccgcgg aacgtcgcag ccatggccgc gcagatgcaa ctccgctacg
     1141 tcggcatcac cagcgtgaac cgggatgacc tgccggacgg cggatcgacg catttcgccg
     1201 agaccgtggc cgaagtgcgg cgcgctctgc cggaggcccg cgtcgaggtt ctgacgcccg
     1261 acttctgcgg cgacctcgat gccgtcgccc gcgttctcga cgccggtcct cacgtcttca
     1321 accacaacat ggagaccgtc gccaggctct accgccgcgt ccggccgcag gcgaactacc
     1381 gccagtcgct cgacgtgctc gccttcgcca agcggcaccg cccgcacgtg atggcgaagt
     1441 ccggtctgat ggttggcctc ggcgagcgcc cccacgaagt cgaacaacta ctgtccgatc
     1501 tgcacgcgca cgacgtcgac gtagccacga tcggccagta tctgcagccc acgcggcgca
     1561 accttcgcgt ggccgagtac gtgacgccgg cgcagttcga cgcctaccgg gacttcggcc
     1621 tcggcgccgg tttgaagatg gtcttcagcg gccccttcgt gcgcagctcc tatatggccg
     1681 acctggtcag cgaaggacgt tcgccggcct ctcggtgctg aactggctgc tcgcagcgtt
     1741 gagcgggctg cttctcgtct tcattcatcc gcgtttcgat ttcgtctggc tcgcgccggt
     1801 cgccgtcgcg ccgattgcgt ttgcgctcgc gcgcgaaccg cgcctcaagc gccgattcct
     1861 gctcggctat gcctgcgggc tcgtcttctg ggccggcatc aactattgga tccagttcgt
     1921 catgtcggta cacggcaagc tgggacccgc gggcggttgg gcggcattcg tcctcttctg
     1981 cttcctgcgt gccgtgcccc tcggcctctt cgcgttggcc gcgcgaccgc tgctctcgac
     2041 ccgcttcgct gtcccactca ccgccgctct ctgggtcgcg atggagcgga tcccgtggct
     2101 cttcaactac acctggctgt tgctcggcaa tgccggcatc gacatggcga tccccatgcg
     2161 cctggccccg ttcaccggcg tctacgggct atcgttcgtc ttcgctgcca ccggcgttgc
     2221 tctcgcgctg atcgcattgc ggcggcctcg tgcccatact gcatggatgc tcggcgtcgt
     2281 gctgctgttc ggcctg
//
LOCUS       DATAIQ010000112         3120 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_6373, whole genome shotgun sequence.
ACCESSION   DATAIQ010000112 DATAIQ010000000
VERSION     DATAIQ010000112.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3120)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3120)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3120
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_6373"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(3..911)
                     /locus_tag="VHN20_01960"
     CDS             complement(3..911)
                     /locus_tag="VHN20_01960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724566.1"
                     /translation="MSLSRHSYRVLLSAHLLATTAIVAVHAEPAPGTGGEDKALEIPG
                     GDIFGFTSPTDVGSPGDRGIAFELSSRAGKREGSYVSPTLKTQFGYTLAENLAVAFSP
                     WITAHRIRGVPDIDDRTRVDFDGVSGEISYRFVERTATNPFAATLSTEPRFARVDALT
                     GERVSAYGNEFKLFMDTVIVPDRLYGAVNLNYAFATQKGSDDKWADGSGTNVSGALTY
                     QLTEKVFAGLEGRYLTAFSGAFLNHLSGQAVFAGPTLLVKLSDSAALNFVWTPQVAGR
                     AEDTRGALDLDNFERHQFRAKLSASF"
     gene            complement(953..1870)
                     /gene="nudC"
                     /locus_tag="VHN20_01965"
     CDS             complement(953..1870)
                     /gene="nudC"
                     /locus_tag="VHN20_01965"
                     /EC_number="3.6.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015927752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000210 - NAD+ diphosphatase activity
                     [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) diphosphatase"
                     /protein_id="HEX2724567.1"
                     /translation="MSDIGFITNPLLRHSAERDSDQLARYAADPKALTTIIAGEIPIL
                     RRNGGAHTALLPLADLDRAAPFEEQVFLGTLASTPVWGTLVTPGSADAFRHDPAFEVL
                     DLRSIAVQGVVPPPELGVLAEAKALLHWHARHRFCANCGAATRLSCAGFRRDCSGCGA
                     QHFPRTDPVAIMLVAHGERCLLGRQSRFVAGMYSCLAGFIEPGETIEDAVRRETLEEA
                     GIRVGAVRYAASQPWPFPASLMIGCVAEALTEELTVDREELEDARWFTREEVALMLDG
                     THPDGLRGPVGMAIAHHLMRSWLRGFTAA"
     gene            complement(1885..2298)
                     /locus_tag="VHN20_01970"
     CDS             complement(1885..2298)
                     /locus_tag="VHN20_01970"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003603554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HIT family protein"
                     /protein_id="HEX2724568.1"
                     /translation="MAEFALDARLAADTIPVGDLALSSVLLMDDARFPWLILVPRRPG
                     VSELTDLAEADAALLIQEIRIAARVVTELARPDKLNVGALGNIVPQLHVHVVGRFRSD
                     PAWPGPVWGHGSRTPYPEHAAAALIERAASLFTAA"
     gene            2428..2524
                     /gene="ffs"
                     /locus_tag="VHN20_01975"
     ncRNA           2428..2524
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="VHN20_01975"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            2575..>3120
                     /locus_tag="VHN20_01980"
     CDS             2575..>3120
                     /locus_tag="VHN20_01980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018261473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX2724569.1"
                     /translation="MDQTTGTPPFDEPALPGFTPAPATAVQPAYRVLARKYRPRTFDD
                     LIGQEAMVRTLSNAFETGRIPQAWMLTGVRGVGKTTTARILARALNYELADNGPSGPT
                     IHMPGLGVHCEAIMESRHVDVLEMDAASHTGVENIRQITDAVRYAPATARYKVYIIDE
                     VHMLSSAAFNAFLKTLEEPPPH"
BASE COUNT          550 a         1042 c         1068 g          460 t
ORIGIN      
        1 cgtcagaagc tcgcgctgag cttggcgcgg aactggtgcc gctcgaaatt gtcgaggtcg
       61 agcgcaccac gggtgtcctc ggcgcggccc gcgacttgcg gggtccacac gaaattcagg
      121 gcagcgctgt cgctcagctt caccaggagc gtcggcccgg cgaacacggc ctgtccggaa
      181 aggtgattga ggaaggcgcc cgagaaggcc gtcaggtagc gtccctcgag gccggcaaag
      241 accttctcgg tcagctggta agtcaacgct cccgagacgt tcgtgcccga gccgtcagcc
      301 cacttgtcgt cggatccctt ctgggtggcg aaggcatagt tcaggttgac ggcgccgtag
      361 agccgatccg gcacgatgac cgtgtccatg aacagcttga actcgttgcc ataggcgctc
      421 acgcgttcgc ccgtgagggc gtcgacgcgg gcgaaccgcg gctccgtgga gagcgtcgcc
      481 gcgaatgggt tggtcgcggt gcgctcgacg aagcgatagg agatctcgcc ggagacgcca
      541 tcgaagtcga cccgggttcg atcatcgatg tcgggcacgc cacggatgcg gtgcgccgtg
      601 atccacggcg agaaagcgac ggcgaggttc tcggcgagcg tgtagccgaa ctgcgtcttc
      661 agcgtgggcg agacgtagct cccttcgcgc tttccggcgc ggctggaaag ctcgaatgcg
      721 atgccccggt cgccggggct gcctacgtcg gtcgggctcg tgaaaccgaa gatatcgccg
      781 ccggggattt cgagcgcttt gtcttcgccg ccagtgcctg gcgcgggctc ggcgtggacg
      841 gcaacgatcg ccgtggtggc caggagatgc gcgctcagca gcacgcgata cgagtgacgc
      901 gacaaagaca tggtgactcc aaccagacac catgcggata tgcgattcgc acttaagcgg
      961 cggtaaagcc gcgcagccag ctgcgcatca gatgatgcgc gatggccatg cccaccggcc
     1021 cgcgcagccc gtcggggtgg gttccgtcga gcatcagcgc cacctcctcg cgcgtgaacc
     1081 agcgcgcatc ctcgagctcc tcgcggtcga cggtgagttc ctcggtgagc gcctccgcga
     1141 cgcagccgat catcagcgac gccgggaacg gccagggctg cgaggcggca tagcgcaccg
     1201 cgccgacccg aatgcccgct tcctccagcg tctcgcgccg caccgcatcc tcgatggtct
     1261 cacccggttc gatgaagccg gcaaggcacg aatacatgcc ggccacgaac cgcgactggc
     1321 gcccgaggag acagcgctcg ccgtgcgcca ccagcatgat cgcgaccggg tccgtgcgtg
     1381 ggaaatgctg cgccccgcag ccgctgcaat cgcggcggaa cccggcgcaa gacagcctgg
     1441 tcgcagcccc gcaattggcg cagaaccgat ggcgtgcatg ccagtgcagc agcgccttgg
     1501 cctcggccag gacgcccagt tccggcggcg gcacgacgcc ctgcacggcg atcgagcgca
     1561 ggtcgagcac ctcgaaggcg ggatcatgcc ggaacgcgtc ggcgctaccc ggcgtgacca
     1621 gcgtgcccca gacgggcgtg ctcgcgagcg tcccgagaaa cacctgttcc tcgaacggcg
     1681 cagcgcgatc cagatcggca aggggaagca gcgccgtgtg ggcgcccccg ttccggcgca
     1741 gaatcggaat ctcaccggcg atgatggtgg tgagggcctt cggatcggct gcgtagcgtg
     1801 ccagctggtc cgagtcgcgc tcggcgctgt ggcgcagcag cgggttggtg atgaagccga
     1861 tatcggacat caggattctt tcggtcaggc agcggtgaac aggcttgcgg cgcgctcgat
     1921 cagggcagcg gccgcatgtt ccggataagg cgtgcggctg ccgtgacccc agacggggcc
     1981 cggccaggcc ggatcggagc ggaaccggcc caccacatgg acgtgcaact gagggacgat
     2041 gttgcccagg gcgccgacat tgagcttgtc gggcctcgcc agctcggtga cgacgcgcgc
     2101 ggcgatgcga atctcctgga tcaggagagc cgcgtctgcc tccgcaagat ccgtcagctc
     2161 gctgacgccc ggtcgtcgcg gcaccaggat caaccacgga aagcgcgcat cgtccatcag
     2221 gaggacggaa gagagcgcga ggtcgccgac cgggatggtg tcggcggcaa ggcgcgcatc
     2281 gagagcgaat tcggccatgc gcggaactta gagcatgatc cggcggagtg gataccgctt
     2341 cgccgaaaaa ggcttgttcc ggatggcatg tgaagcgcca gccggccgcg cttgcgtccg
     2401 gacgggcaaa ggcccatata cccggccggg aggttggcga gggacgtttc actcgccaac
     2461 cgggtcaggt ccggaaggaa gcagccctaa cgagaccgag cgggtcttcg tccagcctcc
     2521 cacctgccgg tccggcctcc gcgccgcggc gcctctcgcc cgaaatcgac gccgatggac
     2581 caaacgaccg gcacgccccc attcgacgag ccggccctgc cgggcttcac gcctgcgccg
     2641 gcgaccgccg tgcaacccgc ctaccgcgtc ctcgcgcgca aatatcgccc gcgcaccttc
     2701 gacgacctga tcggccagga ggcgatggtg cgcaccttgt ccaacgcatt cgagaccggg
     2761 cgcatcccgc aggcttggat gctgaccggc gtgcgcggcg tcggcaagac cacgacggcg
     2821 cggattctgg cgcgcgcgct caattacgaa ttggccgaca acggcccgtc cgggccgacc
     2881 atccacatgc cgggcctcgg cgtgcattgc gaagcgatca tggaatcgcg ccatgtcgac
     2941 gtgctcgaga tggacgcggc ctcgcatacc ggcgtcgaga acatccggca gatcaccgac
     3001 gcggtacgct acgcgcccgc gacggcgcgc tacaaggtct acatcatcga cgaagtgcac
     3061 atgctgtcgt cggcggcgtt caacgcattc ctcaagacgc tcgaggagcc gccgccgcat
//
LOCUS       DATAIQ010000113         2547 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_375400, whole genome shotgun sequence.
ACCESSION   DATAIQ010000113 DATAIQ010000000
VERSION     DATAIQ010000113.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2547)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2547)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2547
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_375400"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(228..974)
                     /locus_tag="VHN20_01985"
     CDS             complement(228..974)
                     /locus_tag="VHN20_01985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008125558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX2724570.1"
                     /translation="MGKTILITGASRGIGRAAALIAAKRGWSVAVNYVGNRAAADEVA
                     GAVGRGGGKAVALQGDVSVEADVIAMFDAAERDLGPLDGVVLNAGVVAPPSRLIDMSA
                     ERMRRIFDVNVLGSYLCARESARRMARSRGGRGGAIVLVSSIAARLGAPSEYVDYAGA
                     KGALDTLTIGLAKELGGEGVRVNAVRPGLIDTEIHASGGQADRVQRLGGAAPLGRAGQ
                     PDEVAEAIVWLLSDAASYTTGALLDVTGGR"
     gene            1433..1618
                     /locus_tag="VHN20_01990"
     CDS             1433..1618
                     /locus_tag="VHN20_01990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020050360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3008 family protein"
                     /protein_id="HEX2724571.1"
                     /translation="MPAKSKKQQMAAGAALSAKRGERPRSSLKGASKQMAKSMSEPEL
                     KKMASVKRKKLPKRAAK"
     gene            1794..2174
                     /locus_tag="VHN20_01995"
     CDS             1794..2174
                     /locus_tag="VHN20_01995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013844270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HEX2724572.1"
                     /translation="MTKNVKQLLADANASVPKLSPAEAVQKVRSGEVLVVDVRDPNEV
                     QQSGKVKGSVNVSRGMLEFRADPESPYHNPAFEKNTTILLHCASGGRSALAGKTLQEM
                     GYTKVFNIGGFKELAEAGIDTEPA"
     gene            complement(2219..>2547)
                     /locus_tag="VHN20_02000"
     CDS             complement(2219..>2547)
                     /locus_tag="VHN20_02000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014332841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HEX2724573.1"
                     /translation="PRDHLTEMFLGTSLIDDRRIYFDASPLSYVSARNNATAFLLAWG
                     THDDIVDPRQSEVFLEALKQARYVVRTVVVAGAPHYWLPDPLDEPQSFSAFFAHRLLR
                     FLKQRL"
BASE COUNT          453 a          870 c          840 g          384 t
ORIGIN      
        1 cgaaggacgt cgccgtctat ggcgttatcg cggaaagccg cctcgtactg tccaagaccc
       61 aggccgctca gccacgcccc aacatccatg tgccgacgtc tccgccttga gagcacaatc
      121 ctcaagacgc cgtgggctgt ccagttcgac ggttctgaac ttgctgccat cgcccacaag
      181 cggacgcggc gcctcggatc ctcgccagct ccaggccgag gtgggattca ccgcccgccg
      241 gtcacgtcga gcagcgcccc cgtcgtgtag gatgcggcgt cgctcaacag ccagacgatc
      301 gcctcggcga cctcgtctgg ctgaccggcc cgcccgagcg gcgcggcgcc gccgaggcgc
      361 tgcacccggt cggcctggcc gccgctggcg tggatttcgg tgtcgatcag cccgggccgc
      421 accgcgttga ccctgacgcc ttcgcctccg agctccttcg cgaggccaat ggtgagcgtg
      481 tccaaggccc ctttcgcgcc cgcatagtcg acgtattcgg acggagcgcc gagccgagcc
      541 gcgatcgacg acacgagcac gatcgcaccg ccgcggccgc cccggctgcg ggccatgcgc
      601 cgggcgctct cccgggcgca cagatacgat ccgaggacgt tcacgtcgaa gatgcggcgc
      661 atgcgctccg cgctcatgtc gatcagccgc gacggcggcg ccacgacccc ggcgttgagc
      721 acgacgccat cgagtgggcc gaggtcgcgc tcggccgcgt cgaacatggc gatgacgtcg
      781 gcctccaccg agacgtctcc ctgcagcgcg acggccttgc cgccacctcg cccgaccgcc
      841 ccggcaacct cgtcggccgc agcgcggttg ccgacgtagt tgaccgcaac ggaccagccc
      901 ctcttcgccg cgatcagggc cgcagcgcga ccgatgcccc ggctcgcccc cgtgatcaga
      961 atggtcttgc ccatgtgctc cccgccgatg aacgagattt cctgcagatc gatggttacg
     1021 gctgacgcgg gccgttgtcc gcgcgccggc tgcagtcgag ggatgcctca agcgcagcgc
     1081 tgatgtcgag tgttggatat ctcccagcgg gcgccggcgg ttctgcgcag catggccgtc
     1141 gactaccctt ggaggcggaa tcatggaccc gctggaatcc gcatgcccac acggtcaggt
     1201 gaacattgct ggtacttgct ctcgccttca tcggcactgg cggccggctt cttcatctga
     1261 gctaccgcga tgtcatcagc gggaggtcca tcatgctgct gcaacggcgc tcttccgctg
     1321 atcgcccaac gcgggagcag cgagcaagcc ggacgacgcc gcaatcattg actcgcggcc
     1381 catcgatttg ctttctctac aaccggatgc ggcgcattcc cgggaggaga gcatgccggc
     1441 caagtccaaa aagcagcaga tggccgcggg cgcggcgctt tcggccaaac gcggcgagcg
     1501 gcccagatcg agcctgaagg gcgcgtcgaa gcagatggcc aagtcgatga gcgagcccga
     1561 actcaagaag atggccagcg tcaagcgcaa gaagctgccg aagcgcgccg ccaagtaagc
     1621 gcacgtgacc ggagctgcgg cacgacaaag gcgccgccgg gccggcggcg cccaaggcct
     1681 cgcgagttcc accgtacggt gttcgcaatg gccatcgcgg cccggtgccg cttggcgtga
     1741 ggaacgccgg ccgttatctt cgcggcaact gaatggtttg tccggaggag cacatgacga
     1801 agaacgtgaa gcaactgctg gccgacgcca atgccagcgt gccgaaactg tccccggccg
     1861 aagcggtcca gaaggtgcgt tccggggaag tcctcgtcgt cgacgtgcgt gacccgaacg
     1921 aggtgcagca gagcggcaag gtcaaaggct cggtgaacgt gtcgcgcggc atgctcgagt
     1981 tccgcgccga tccggagagc ccgtaccaca acccggcatt cgaaaagaac acgacgatcc
     2041 tgctgcactg cgcatcgggc ggccgttccg cgctggccgg aaaaaccctc caggagatgg
     2101 gctacaccaa ggtcttcaac atcggcggct tcaaggagct ggccgaagcc ggcatcgaca
     2161 cggagccggc gtgatcgagc ggggacgcgt gatcgatcaa atctgaattg ctcccgcgct
     2221 aaagccgctg cttgaggaag cgcagcaggc gatgcgcgaa gaaggccgag aagctctgcg
     2281 gctcgtcgag cggatcggga agccagtagt gcggcgcgcc ggccacgacc acggtgcgca
     2341 ccacgtagcg cgcctgcttc agggcttcga gaaacacctc gctctggcgc ggatcgacga
     2401 tgtcgtcgtg cgttccccag gcgagcagga acgccgtcgc gttgttgcgg gccgacacgt
     2461 aggagagcgg cgaggcgtcg aagtagatgc gccggtcatc gatcaggctc gtgccgagaa
     2521 acatctcggt caggtggtcc cgcggcc
//
LOCUS       DATAIQ010000114         2506 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_421765, whole genome shotgun sequence.
ACCESSION   DATAIQ010000114 DATAIQ010000000
VERSION     DATAIQ010000114.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2506)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2506)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2506
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_421765"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..699)
                     /locus_tag="VHN20_02005"
     CDS             complement(<1..699)
                     /locus_tag="VHN20_02005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015950760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0070069 - cytochrome complex [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0019646 - aerobic electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /protein_id="HEX2724574.1"
                     /translation="MEFDALTLSRIQFAFTIAFHIIFPAFTIGLASWLAALEFNWLRT
                     GNPLYRLLFRFWVKVFAVSFGLGVVSGIVMSYQFGTNWSRFSDFAGNIVGPLMAYEVL
                     TAFFLEASFLGIMLFGWEKVGDRLHFLSTCLVALGTLVSAFWILSANSWMQTPDGFAI
                     ENGMAVPVDWWKIVFNPSFPNRFAHMVLGCYLTTAFAVGGMSAWMILHAGEKPPGTVA
                     ASRRSMSMALWFAAI"
     gene            complement(796..1923)
                     /locus_tag="VHN20_02010"
     CDS             complement(796..1923)
                     /locus_tag="VHN20_02010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003601980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IB"
                     /protein_id="HEX2724575.1"
                     /translation="MLLEDATESGTVVDPRDAAESAGLTYVSDEEPGIRRRKAGKGFS
                     YTRPGGQTVKDPATLKRIRALVIPPAWTDVWICPRANCHIQATGRDAKGRKQYRYHTR
                     FREVRESTKYEHMLDFARSLPAIRESIAEHMGLRGLPREKVLATVVNLLETTLIRVGN
                     EDYARQNKSYGLTTLRGRHVAVNGSELRFNFKGKSGKTWKLKVKDRRVAKIIKAMQDL
                     PGQDLFQYLDDDGEPQAVTSADVNAYLREITGRDITAKDFRTWSGTVLAAWALKEFES
                     FDTQAKAKKNIRSAIEQVAARLGNTPTICRKCYVHPELISCYVEGSLLLEIKEQVEAE
                     LREDLSGLRPEEAAVLSLLEARMNRDLGTALKESVAQLEKA"
     gene            2050..>2506
                     /locus_tag="VHN20_02015"
     CDS             2050..>2506
                     /locus_tag="VHN20_02015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018260996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX2724576.1"
                     /translation="MATNEGKKLAFVVTEDWFFASHFLPMMRAARELGLEVLVITRVR
                     GHRKELEQAGARVIPLEAERRSLNPMAAGYAAGRLAAVLKQWRPDIVHCIALRAILVG
                     GAAALMAGIPRRVYALTGLGFLGARQDLVGRAARRAIRLLVRGLETQRTH"
BASE COUNT          402 a          829 c          842 g          433 t
ORIGIN      
        1 gatggccgcg aaccacaacg ccatcgacat cgaccgccgc gacgccgcca cggtccccgg
       61 cggcttctcg cccgcgtgca ggatcatcca ggccgacatg cccccgaccg caaaggctgt
      121 cgtcaggtag cagccgagca ccatgtgggc gaagcggttc gggaacgacg ggttgaagac
      181 gatcttccac cagtccaccg gcacggccat gccgttctcg atggcgaagc cgtccggcgt
      241 ctgcatccac gagttcgcgg acaggatcca gaacgccgag acgagcgtcc cgagcgccac
      301 gaggcaggtc gacaggaagt gcagccggtc gccgaccttc tcccagccga acagcatgat
      361 gccgaggaac gaggcctcga ggaagaaggc ggtgagcacc tcgtaggcca tgagcggccc
      421 gacgatgttg ccggcgaaat cggagaaccg cgaccagttg gtgccgaact ggtagctcat
      481 gacgatgccg gacacgacgc cgagcccgaa cgacaccgcg aagaccttga cccagaagcg
      541 gaacagcagc cggtagagcg ggttgccggt cctcagccag ttgaactcga gggccgctag
      601 ccagctcgcc agtccgatcg tgaacgcggg aaagatgatg tggaaggcga tcgtgaacgc
      661 gaactggatg cgcgaaagcg tcagcgcgtc gaattccatg atccaagcct tcccggtgcg
      721 gggctaagct agcaacaggt tcgcccgaat gcacctctcc tgcttggagc cccaggaatt
      781 cgtgaaggag acggtttatg ctttctcaag ctgggcaacc gactccttca gcgccgtgcc
      841 gaggtcgcgg ttcatgcgcg cctcgagcag gctcagcacc gccgcctctt ccggccgcag
      901 gccggagaga tcctcacgca gctcggcctc gacctgctcc ttgatctcga gcagcaggga
      961 cccttccacg tagcagctga tcagctcggg atgcacgtag cacttgcggc aaatggtcgg
     1021 cgtgttgccg agccgcgcgg cgacctgctc gatggcgctg cggatgttct tcttggcttt
     1081 ggcctgcgtg tcgaagctct cgaattcctt gagcgcccag gcggccagga ccgtgcccga
     1141 ccaggtgcga aaatccttcg ccgtgatgtc gcgtcccgtg atctcgcgca gataggcgtt
     1201 gacgtcggcc gaggtgaccg cttgcggctc gccgtcgtcg tcgaggtatt ggaacaggtc
     1261 ctggccgggc aggtcctgca tggccttgat gatcttcgcg acgcgccggt ccttgacctt
     1321 gagcttccag gttttgccgc tcttgccctt gaagttgaag cgcagctccg agccgttgac
     1381 cgcaacgtgg cggccgcgca gcgtcgtcag gccgtagctc ttgttctgcc gcgcgtaatc
     1441 ctcgttgccg acccggatca gcgtcgtttc gagcagattg accacggtgg cgagaacttt
     1501 ttcgcggggc aggccgcgca gccccatgtg ctcggcgatg ctctcccgta tcgcgggcag
     1561 gctgcgcgcg aaatcgagca tgtgctcgta tttcgtgctt tcccgaactt cgcggaagcg
     1621 cgtgtggtag cgatactgct ttcggccttt ggcgtcgcgg ccggtggcct ggatatggca
     1681 gttcgccctg gggcagatcc acacgtccgt ccaggccggc gggatgacga gagcgcgaat
     1741 gcgcttgagg gtcgccgggt ccttgacggt ctggccgccc ggccgcgtgt agctgaagcc
     1801 cttgccggcc ttgcggcggc ggatgccggg ctcctcgtcc gacacgtagg tcaggccggc
     1861 ggattcggcg gcatcgcgcg gatcgacgac cgttcccgac tcggttgcgt cttcgaggag
     1921 cattcgttct cccggttgcg tgggtttcgg atcaactgaa agcgccgccg ggatgttcca
     1981 tcccgccgcc cgggcgggta gaagggcggg cagcccctcg ccgcccctcc cgcagccgaa
     2041 cggtccacca tggcaacgaa cgaaggaaag aagctcgcct tcgtggtcac ggaggactgg
     2101 ttctttgcct cgcatttcct gccgatgatg cgcgccgccc gggagctcgg gctcgaggtc
     2161 ctggtgatca cgcgggtgcg cgggcatcgc aaggagctcg agcaggcggg cgcccgcgtc
     2221 atcccgctcg aggccgagcg ccgcagcctc aacccgatgg cggcgggcta cgccgccggc
     2281 cggctcgccg cggtcctcaa gcaatggcgg ccggatatcg tgcactgcat cgcgctgcgc
     2341 gcgatcctcg tcggcggcgc ggcggcgctg atggccggca tcccgcgccg ggtctatgcg
     2401 ctcaccggtc tcggcttcct gggcgcgcgg caagacctcg tggggcgtgc cgcccggcgc
     2461 gcgatccgcc tcctggtgcg cgggctcgag acccagcgca cgcatt
//
LOCUS       DATAIQ010000115         2750 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_421767, whole genome shotgun sequence.
ACCESSION   DATAIQ010000115 DATAIQ010000000
VERSION     DATAIQ010000115.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2750)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2750)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2750
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_421767"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..724
                     /locus_tag="VHN20_02020"
     CDS             <1..724
                     /locus_tag="VHN20_02020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009494661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TIGR01459 family HAD-type hydrolase"
                     /protein_id="HEX2724577.1"
                     /translation="VVVLVSNAPRPGGSVATQLDRVGVPRSAWDAIVTSGDLTRAAVI
                     ARKDQVVHHLGPVRDRPIFDGLDVRFGDIDVADYVVCSGFDDDDLETVDDYRERLQRM
                     RDRNLWMICANPDIVVERGDRLVPCAGALALAYEERGGEVFYAGKPHRPIYEAALQTA
                     ARLRGGEAVPVDRVLAIGDAMRTDIAGASAYGIDTLLTARGIHAAELGLEEGPLDAAH
                     VRRWLSGQECQPRGVCELLSWG"
     gene            complement(812..1423)
                     /locus_tag="VHN20_02025"
     CDS             complement(812..1423)
                     /locus_tag="VHN20_02025"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018046000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009288 - bacterial-type flagellum
                     [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0050920 - regulation of chemotaxis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein phosphatase CheZ"
                     /protein_id="HEX2724578.1"
                     /translation="MASATARAIRAPARTKDGAPKAKSHSGEMAASRTGELEVQVVVR
                     ELANVADYIAHMKKEVAALRANELSRERIPSANDELGNVVQATASATHTIMAAAEEIL
                     GSGGLSDKDYRELVETRVLSIFEACSFQDITGQRISRVLELLGQLETRLDRFAKAVNV
                     RDSADGGDPEEALRQARREVLLLHGPQDEGVAIKQDDIDALFD"
     gene            complement(1464..1847)
                     /locus_tag="VHN20_02030"
     CDS             complement(1464..1847)
                     /locus_tag="VHN20_02030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003604011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX2724579.1"
                     /translation="MALDLSMPILVVDDYQTMVRIIRNLLKQLGFEDVDDASDGTTAL
                     AKLKQKKYGLVISDWNMEPMTGYELLRHVRADENLRQTLFIMVTAESKTENVIAAKKA
                     GVNNYIVKPFNAQTLKTKIEAVCGA"
     gene            2092..>2750
                     /locus_tag="VHN20_02035"
     CDS             2092..>2750
                     /locus_tag="VHN20_02035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012252210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FMN
                     adenylyltransferase"
                     /protein_id="HEX2724580.1"
                     /translation="MSINQQRTTGSRRFDVVRNGDEVPPHLRGAVIAIGNFDGIHLGH
                     RQLVETTIALARTSGRPAAVLTFEPHPRKFFAPDRPMFRLTPEPVKLTILDKLGLDGV
                     FVRRFDAQLAATSAADFVTGLLRDALHVAGVAVGYDFHFGRGREGTPAMLAELCRRHG
                     IDCELVPAIAHRGQPVSSSAIRAALAAGDATLANALLGYRWFVEGEVGHGDKRGRELG
                     FP"
BASE COUNT          404 a          931 c          927 g          488 t
ORIGIN      
        1 ggtggtcgtg ctcgtgtcca atgcgccgcg cccgggcggc agcgtggcga cgcagctcga
       61 ccgggtcggc gtaccacgct ccgcctggga cgcgatcgtc acgtccggcg acctcacgcg
      121 cgccgcggtc atcgcgcgca aggatcaggt ggttcaccac ctcggcccgg ttcgcgaccg
      181 cccgatcttc gacgggctcg acgtgcgctt cggcgacatc gacgtggccg actacgtcgt
      241 ctgctcgggc ttcgatgacg acgacctcga gaccgtggac gactatcgcg agcgcctgca
      301 gcgcatgcgc gaccgcaatc tgtggatgat ctgcgccaat cccgacatcg tcgtcgaacg
      361 cggcgatcga ctggtgccgt gcgccggagc gttggcgctg gcctacgagg agcgcggggg
      421 cgaggtcttt tacgccggca agccgcaccg gccgatctac gaggcggcgc tgcagaccgc
      481 cgccaggctc cgcggcggcg aggcggtgcc cgtcgatcgg gtcctggcga tcggcgatgc
      541 gatgcggacc gacatcgccg gtgcctcagc ctatgggatc gacacgctgt tgacggcgcg
      601 cggcattcac gcggccgagc tcggcctgga ggagggcccc ctcgatgcgg cgcatgtgcg
      661 ccgttggctc agcggccagg aatgccaacc acgcggcgtg tgcgagctgc tgagctgggg
      721 ctgagcgcgt tccggcagcg cttgcggacg cgccggcacg tcaaatcgga tcagagcgga
      781 atcgtctcgc cggaagcgtg tgagccacgc ttcagtcgaa cagggcgtcg atgtcgtcct
      841 gcttgatggc gacgccttcg tcctggggcc cgtgcagcag caggacctcg cggcgcgcct
      901 ggcgcaaggc ttcctcggga tcgccgccgt cggccgagtc gcgcacgttg acggccttgg
      961 cgaagcggtc gaggcgcgtt tccagctggc cgagcaactc gaggacccgg gagatgcgct
     1021 gaccggtgat gtcctggaag gagcatgcct cgaaaatgga cagaaccctg gtctcgacca
     1081 gctcgcggta atccttgtcc gagagcccgc cggaaccgag gatctcctcg gcggcggcca
     1141 tgatggtgtg cgtggccgag gccgtcgcct gcacgacgtt gccgagctcg tcattggccg
     1201 aagggatacg ctcgcgcgag agctcgttgg ctcgcagcgc cgcgacttcc ttcttcatat
     1261 gcgcgatgta gtccgccaca ttcgccagct cgcggacgac gacctgcacc tccagctcgc
     1321 cggtgcggct ggcggccatt tcgccgctat ggctcttggc cttgggggcg ccatccttcg
     1381 tcctggcagg ggcgcgaatt gcgcgggccg ttgcactcgc catgtccagc ctcactgtcg
     1441 aatgagcgtg ccttgcagct ccgtcaggcg ccgcaaaccg cctcgatctt ggtcttgagc
     1501 gtctgcgcgt tgaacggctt gacgatgtag ttgttcacgc cggccttctt ggcggcgatg
     1561 acgttctcgg tcttcgactc tgccgtgacc atgatgaaga gcgtctggcg caggttctcg
     1621 tcggcgcgca cgtggcgcag cagctcgtag ccggtcatcg gctccatgtt ccagtcggag
     1681 atgaccagcc cgtatttctt ctgcttcagc ttggcgaggg ccgtggtgcc gtcggaagcg
     1741 tcgtcgacgt cctcgaagcc gagctgcttg aggaggttgc gaatgatgcg gaccatcgtc
     1801 tggtagtcgt ccacgacgag aatcggcatc gacaaatcga gcgccatgat ccctgctccg
     1861 aattggtagg cgccgccctt ggcgggcggc aatagataac cgttgaggaa ttccgtccgg
     1921 aatgtcccca ggtgagacgc tacagcgatc cagtttcaaa gccgttaatc acgggcccgg
     1981 gccgcctgca cgccgcagcg ccccgccaaa acaccggctg cggcggcttg acccccggaa
     2041 aggatttgga caggttcgcc cccctcgcac ggttccgggc cattttctca aatgtctatt
     2101 aaccagcagc gcacgactgg atcgcgccgc ttcgatgtcg ttcgcaacgg cgatgaggtg
     2161 ccgccgcatc tccggggcgc ggtgatcgcc atcggcaact tcgacggcat ccacctcggc
     2221 caccgccagc tcgtcgagac gaccattgcc ttggcccgga cgtccgggcg gcccgccgcg
     2281 gtcctgacct tcgagccgca tccgcgaaag ttcttcgctc ccgaccgacc catgttccgg
     2341 ctgacgcccg aacccgtgaa gctgaccatc ctcgacaagc tcggcctcga cggcgtgttc
     2401 gtgcgccgtt tcgacgcgca gctggcggca acgagcgccg ccgatttcgt gaccggtctc
     2461 ctgcgcgacg cgctgcacgt cgccggcgtt gcggtgggct acgatttcca cttcggtcgc
     2521 ggccgcgaag gcacgccggc catgctggcc gagctttgcc ggcgccacgg catcgattgc
     2581 gaactcgtgc cggcgatcgc gcatcgcggg cagcccgtct cgtcgagcgc catccgcgct
     2641 gcgctcgcgg ccggggacgc tacgctcgcc aacgcgctcc tcggctaccg ctggttcgtc
     2701 gagggcgagg tcgggcatgg ggacaagcgc gggcgcgagc tcggctttcc
//
LOCUS       DATAIQ010000116         1757 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_6659, whole genome shotgun sequence.
ACCESSION   DATAIQ010000116 DATAIQ010000000
VERSION     DATAIQ010000116.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1757)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1757)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1757
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_6659"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            162..560
                     /locus_tag="VHN20_02040"
     CDS             162..560
                     /locus_tag="VHN20_02040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012456532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HEX2724581.1"
                     /translation="MSEKRSARRWPTCLKGQVRAEDGRVLDCLIRDFSATGARLELSG
                     ATELPASFKLYFPLKQATFPAHVRWRRDNELGLSFETPIEAPVDPQQAVLLERLLELE
                     ADNASLRLELASYKAKQLAAHLQKKTGTDN"
     gene            1088..>1757
                     /locus_tag="VHN20_02045"
     CDS             1088..>1757
                     /locus_tag="VHN20_02045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012254095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pseudouridine synthase"
                     /protein_id="HEX2724582.1"
                     /translation="MLVIDKPAGLAVHPGPKGGETLFDHLDALRFGLPRRPEVAHRLD
                     KDTSGCLVLGRHAKALARLGELFKRNEVDKTYWAVVEGGPSEAQGEIALALGKRSAER
                     GWWMKVDPKGQPALTQWRVLGRRGDIALLELRPITGRTHQLRVHCAAMQWPIVGDAIY
                     GTAPRFGGPGLQLHARAVTVPLNPNKPPITVEAPVPAHMRERIEGLLSLAPVDVAKEE
                     DPVPG"
BASE COUNT          272 a          598 c          604 g          283 t
ORIGIN      
        1 ctttgtctgg agaggtctcg gacatttacc tttgtgaacc ccgatggggt gcctcgataa
       61 ccgaaagcgg cccgcctggc gatggcgccg agcgcaccat cccgctcagc ctttcttaaa
      121 gcctgtcaga tagggatcag gacgctgtcg cggaaccaca gatgagtgag aaaagatctg
      181 ccaggcggtg gcccacgtgc ctcaagggcc aggtccgggc agaggacgga cgcgtgctcg
      241 actgcctgat ccgcgacttc tcggccacgg gcgcgcggct ggaactctcg ggcgccacgg
      301 agctgccggc ctccttcaag ctctattttc cgctcaagca ggcgactttc ccggcccacg
      361 tccgctggcg ccgcgacaac gagctcggtc tttccttcga gacgccgatc gaggcgcccg
      421 tcgacccgca gcaggccgtg ctcctcgagc gcctgctcga gctcgaggcc gacaacgcct
      481 cgctgcgact ggagctcgca tcctacaagg cgaagcagct cgccgcgcac ctgcagaaga
      541 agaccggaac ggacaattga cgatcgccgg tctgtgaagc gcttcacagg cgagcggcgc
      601 cgggccgctc tagcatcccg gcatgatgaa gatcctgatg ttcctgctcg tgctcggtgc
      661 gtcctcgctg ttctgggcgg ccttcgtcct cggccggatt taactcctta gcggcggcga
      721 aaggtcacgc ggcgccctcg cgtggcccgc ggacggtcgc ccgtcccgca tgcgaccgcc
      781 ccgtggcggc cggcgccgga aagcccgtgc cccgcgcggc gcttcctgcg ccgccggacc
      841 gaacaaattg cccgcggttg atttcacgtt tacggacgtg ccgtttgcga ggcggaaggg
      901 tcgtcgcgcc ggcaatcggc tcgcgtggtt agcgcatgat gagttcatcg aggtgtcgct
      961 tgattcgtcc ggcaggccgt cggccatgac cgtctcccgg atcggcgtga gccgcgtcga
     1021 ctgcgcgcgg gctcccatcg tgagcgcgga cgagatcatc cgccgcgtgc tctatcgcga
     1081 cggcctgatg ctggtcatcg acaagccggc cgggcttgcg gtgcatccgg ggccgaaggg
     1141 cggcgagacg ctcttcgacc atctcgacgc cttgcgtttc gggctgccgc gccggcctga
     1201 ggtggcgcat cgcctcgaca aggatacctc cggctgcctc gtgctcggcc gtcatgccaa
     1261 ggcgctggcg cggctcggcg agctgttcaa gcgcaacgag gtcgacaaga cctattgggc
     1321 cgtggtcgag ggcggcccga gcgaggctca gggcgagatc gcgctggcgc tgggaaagcg
     1381 cagcgccgag cgcggctggt ggatgaaggt cgatccgaaa ggccagccgg cgctgacgca
     1441 gtggcgcgtg ctcggcaggc gaggggacat cgcgctgctc gagctgcggc cgatcaccgg
     1501 gcgaacgcac cagctgcgcg tgcactgcgc ggcgatgcag tggccgatcg tcggcgacgc
     1561 catctacggc accgcgccgc gcttcggcgg cccggggctg caactgcacg cccgcgccgt
     1621 caccgtgccg ctcaacccga acaagccgcc gatcacggtc gaggcgccgg tgccggcgca
     1681 tatgcgcgag cggatcgagg ggctgctatc cctcgcgccc gtcgacgtag ccaaagaaga
     1741 agaccctgtg ccgggat
//
LOCUS       DATAIQ010000117         1707 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_187655, whole genome shotgun sequence.
ACCESSION   DATAIQ010000117 DATAIQ010000000
VERSION     DATAIQ010000117.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1707)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1707)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1707
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_187655"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..669)
                     /locus_tag="VHN20_02050"
     CDS             complement(<1..669)
                     /locus_tag="VHN20_02050"
                     /inference="COORDINATES: protein motif:HMM:NF016763.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005576 - extracellular region [Evidence
                     IEA];
                     GO_process: GO:0046677 - response to antibiotic [Evidence
                     IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="VanZ family protein"
                     /protein_id="HEX2724583.1"
                     /translation="MTAHHTPSPPLTRIVLLIAGLIVYGSLYPWQFDTGLFDANLHRV
                     LSGGGTGLPGRIFLRDVVVNVAIYVPLGAAALLAWGSPWRALLLGGVLSAAVEAIQMV
                     TRFRTSNPVDSVTNVTGTAIGVALGLLLRPRLLPLVQAEARARWRKTDPVAAALLAAW
                     IAYLFFPYMPISGTFVLRRKVAAFLVVGPRAATLAVVSAAFCWYTAGRLLAAAGALRI
                     GTLLA"
     gene            complement(656..732)
                     /locus_tag="VHN20_02055"
     tRNA            complement(656..732)
                     /locus_tag="VHN20_02055"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(696..698),aa:Val,seq:tac)
     gene            766..>1707
                     /gene="recA"
                     /locus_tag="VHN20_02060"
     CDS             766..>1707
                     /gene="recA"
                     /locus_tag="VHN20_02060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012111499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008094 - ATP-dependent activity, acting
                     on DNA [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HEX2724584.1"
                     /translation="MRVPVRCQHYESVNEAERRRAILTALAQMDKQFGKGSVLMLGSR
                     SALPVTVIPSGSLALDAALGVGGFPRGRVVEIYGPESSGKTTLTLHVMAEAQKLGGYA
                     AFIDAEHALDPEYAHKLGVCTDNLLVSQPDCGEQALEIASSLAATSAVDLIVVDSVAA
                     LVPKAELEGEMGDSHVGLQARLMSQALRKLTGLVARTNTCLVFINQLREKIGVMFGNP
                     ETTTGGRALKFYSSVRVEVRRGAALKDGDRIIGSRTKIKVVKNKVAAPFKDVEVDLIH
                     GEGISRESDLVDLGALHNVLEKSGSWFSYKAERIGQGR"
BASE COUNT          338 a          556 c          552 g          261 t
ORIGIN      
        1 cgcaagcagc gtcccgatac gcagtgcgcc cgcggccgcg agcaggcgtc ccgccgtgta
       61 ccagcaaaag gcggcagaga ccaccgcgag agtagcggca cgagggccga ccaccagaaa
      121 cgcggcgacc tttctgcgga gcacgaaggt gccggaaatc ggcatgtacg ggaagaacag
      181 atacgcaatc cacgccgcca gcagtgctgc tgctacagga tccgtcttcc gccatctcgc
      241 cctcgcttcc gcttgcacca gtgggaggag gcgcgggcgc agcaggagtc cgagcgccac
      301 gccgatcgcc gtgccggtaa cgttcgtcac cgagtcgacc gggttcgacg tgcggaagcg
      361 cgtcaccatc tggatcgctt cgaccgcggc cgagaggacc ccaccgagca gcagggcgcg
      421 ccacgggcta ccccacgcga gcagcgccgc cgcgccgagc ggcacgtaga tggcgacgtt
      481 tacaaccacg tctcgaagga agatacggcc cggcagtccg gttccaccgc ctgagaggac
      541 gcgatgcaga tttgcatcga aaaggccggt gtcgaactgc cacggataga gcgagccgta
      601 aacgatcagg ccggcaatca gcaggacgat gcgcgtcaga ggaggcgacg gtgtgtggtg
      661 ggcggtcaca ggatcgaact gtggacctcc tgcttgtaag gcaggcgctc taaccggctg
      721 agctaaccgc ccggacttct tcgattctac tagactccga ttttcatgag agttccggtg
      781 cgctgccagc actacgaaag cgtgaacgaa gcagaacgcc gtcgcgccat ccttactgcg
      841 cttgcgcaaa tggacaagca gttcgggaaa gggtccgtgc tcatgctcgg ctcgaggagc
      901 gcgctgcccg tcactgtcat cccgagcggg tcgcttgccc tcgatgccgc gctcggcgtc
      961 ggcggcttcc cgcgcggccg cgtggtcgag atctacggcc cggaatcgtc aggcaaaacc
     1021 acgctgacgc tgcacgtcat ggccgaagcc cagaagctcg gaggctacgc cgcgtttatc
     1081 gacgccgagc acgcgcttga ccccgagtac gcccacaagc tcggagtctg cacggacaat
     1141 ctcctcgtgt cccagccgga ctgcggcgag caggcgctcg agatcgccag ctctctcgcc
     1201 gctacgtcgg ccgtcgatct catcgtggtc gactccgtcg cggccctggt tcctaaggcc
     1261 gagctcgaag gcgagatggg agacagccac gttggcctgc aggcgcggct gatgtcgcag
     1321 gcgctgcgca agctcaccgg cctggttgcc cgcactaaca cctgcctcgt gttcatcaac
     1381 cagcttcgcg agaaaatcgg cgtgatgttc ggcaatccgg agacgaccac cggcgggcgc
     1441 gcgctgaagt tctacagctc ggtccgcgtc gaagtccgcc gcggcgctgc gttgaaagac
     1501 ggcgaccgca tcatcggcag ccggaccaaa atcaaggttg tcaaaaacaa agtagctgcg
     1561 ccgttcaagg acgtcgaggt cgacctcatc cacggcgagg gcatctcgcg tgaaagcgat
     1621 ctcgtcgatc tgggagccct gcacaacgtc ctcgaaaaga gcggctcgtg gttcagctac
     1681 aaggcggagc ggatcgggca ggggcgc
//
LOCUS       DATAIQ010000118         3062 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_99099, whole genome shotgun sequence.
ACCESSION   DATAIQ010000118 DATAIQ010000000
VERSION     DATAIQ010000118.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3062)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3062)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3062
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_99099"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..130
                     /locus_tag="VHN20_02065"
     CDS             <1..130
                     /locus_tag="VHN20_02065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018458602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HEX2724585.1"
                     /translation="GLIAEGKATTADEIRELMSGNLCRCGAYPNIVAAIQQAMRQP"
     gene            127..1143
                     /locus_tag="VHN20_02070"
     CDS             127..1143
                     /locus_tag="VHN20_02070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009025775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein subunit M"
                     /protein_id="HEX2724586.1"
                     /translation="MINFQYARPADVADAVRQIAADPTAKFIAGGTNLIDLMKMDVER
                     PSRLIDISRLPLKSVEEVAGGGLRIGALVPNSDLAHHPLVEQRYPILASAILAGASQQ
                     LRNMASTGGNLLQRTRCYYFYDVTTPCNKREPGSGCSAIDGVNRMHAILGTSDACIAT
                     HPSDMCVALAALDASVRVAGPAGERTIAFAEFHRLPGNTPERDNNLSRDEIVTAVELP
                     AKGFATNYTYLKIRDRLSYAFALVSVAAALDLDGATIKDARLALGGVAHKPWRDPAAE
                     AALRGQGAEESTFARAAELLLRDARGYGHNSFKIGLARRAIVRALSQAARGAPQSQSD
                     KKIR"
     gene            1151..>3062
                     /locus_tag="VHN20_02075"
     CDS             1151..>3062
                     /locus_tag="VHN20_02075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012046076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEX2724587.1"
                     /translation="MTQYIGTPTPRVDGSAKVTGAAKYAAEFNTSRLAYGSIVEATIA
                     KGRIARIDASAALRVPGVLDVLTHENRPSMASSPSAYKDDVAPDEGSPFRPLYDDAVI
                     FNGQPIGLVLAEESEIARFAASLVRVEYDRASHATDLEANRGQAFVAEKPAKPRGDAD
                     KAFAAADVRHDADYYIPVEHHNPMELFATTATWEGDGKLTVYDKTQGVQNVQRYLCSV
                     FGMKPDDVHVMSPYVGGAFGSGLRPQHQVVLAVLGARALERPVRVVLTRQQMYSLCYR
                     PGTIEHVALGATAGGTLDAITHEAIAMTSQHEAFSRNDTGWSGVLYKSPNARYEHKLV
                     RLDLPTPGDMRAPGAATGVFALECAMDELAVAVKLDPLELRLRCYSDRDQNEGLPFTS
                     KRLRECYRQGAETFGWSKRTPEPRSMRDGSELVGWGMATGVWEALQMKMSARIVLTSN
                     GHAEIACATSDIGTGTYTIMAQVAADMLGLPIDNVTVRLGDSTLPRSPVEGGSWTAAS
                     VAHAIANAAAEVRKQLLGAAKKMPDSPLAHPDDVTLVDGKILDGKSGHAVSIADVMRG
                     GGLDRIEQESTATFKQGSYAHNTHSAVFAEVKIDEQLGVIRVTRVVNAVAAGRILNTH
                     TARSQILGAVVGG"
BASE COUNT          555 a         1037 c         1001 g          469 t
ORIGIN      
        1 gggcctcatt gccgaaggca aggcgacgac cgccgacgaa attcgcgagc tgatgagcgg
       61 caacctctgc cggtgcggcg cctatccgaa catcgtggcg gcgatccagc aggcgatgag
      121 gcaaccatga tcaacttcca atatgcgcgc cccgccgacg tcgccgacgc ggtgcgccag
      181 atcgctgccg atcccacggc aaaattcatt gccggcggca ccaacctcat cgatctgatg
      241 aagatggacg tggaacgtcc ctcccggctg atcgacattt cgcgattgcc gctcaagtcg
      301 gtcgaggaag ttgccggcgg cgggttgcgc atcggcgcgc tggttccgaa ctccgatctt
      361 gcccaccatc cgctggtcga gcaacgctat ccgatccttg ccagcgccat cctggccggt
      421 gcatcgcaac aactgcgcaa catggcgtcg acgggaggca atctcctgca acgcacgcgc
      481 tgctattatt tctacgacgt caccacgccc tgcaacaaac gcgagccagg cagcggatgc
      541 tcggccatcg acggggtcaa ccgcatgcat gccatcctcg gcacgagcga tgcctgcatc
      601 gcgacacatc cgtcggatat gtgcgtggcc ctcgccgccc tcgacgccag cgtgcgcgtg
      661 gccgggccgg cgggcgagcg cacgatcgcc tttgcggagt ttcaccgact gccgggcaac
      721 accccggagc gcgacaacaa cctgtcgcgc gacgagatcg tcaccgccgt ggagcttccg
      781 gcgaaaggct ttgcaaccaa ctacacctat ctgaaaatcc gcgatcgcct gtcctacgcc
      841 ttcgccctgg tttctgtcgc ggctgccctg gatctcgacg gagcgaccat caaggatgcg
      901 cgccttgcgc tgggcggcgt cgcgcacaag ccgtggcgcg atcccgcggc cgaggcggct
      961 ttacgcgggc agggcgccga ggagagtacg ttcgcgcgcg cggcggagct gctgctgcgc
     1021 gacgccaggg ggtatgggca caactccttc aagatcggcc tggcgcgccg cgccatcgtc
     1081 cgcgccctga gccaggcagc gcgcggggcg ccgcaatcgc aatccgacaa gaagatccgg
     1141 tgagccagcc atgacgcagt acatcggcac tcccacgccc cgtgtcgacg ggtctgccaa
     1201 ggtgaccggc gcggcgaaat acgccgccga gttcaacacc agccggcttg cttacggcag
     1261 catcgtcgag gcaacaatcg ccaaggggcg catcgcgcgc atcgatgcga gcgccgccct
     1321 gcgcgtccct ggcgtcctcg acgtgctgac gcacgagaac cgaccatcca tggcgagcag
     1381 cccatccgcc tacaaggacg acgtggctcc ggacgagggc tcgccctttc ggccgttgta
     1441 cgacgacgcc gtcattttca acgggcaacc gatcggcctc gtgttggccg aggaatcgga
     1501 gatcgcccgg ttcgctgcct cgctcgtgcg cgtcgaatac gatcgggcat cacatgccac
     1561 ggatttggag gcaaaccgcg gccaggcatt cgtcgccgaa aagccggcga agccgcgcgg
     1621 cgacgctgac aaggcgttcg cggcggcgga cgtgcgccac gacgccgact attacatccc
     1681 ggtcgagcac cacaacccga tggaattgtt cgccacgacg gcgacctggg agggcgacgg
     1741 caagctgacg gtctacgaca agacgcaggg cgtgcagaac gtgcagcgct acctgtgcag
     1801 cgtgtttggc atgaaaccgg acgacgtgca tgtcatgtcg ccttatgtgg gcggcgcgtt
     1861 cggctccgga ctgcggccgc agcaccaggt ggtgctggcc gtgctcggag cgcgcgcgct
     1921 cgagcgtccg gtgcgcgtcg tcctcacgcg ccagcagatg tacagcctgt gctaccgtcc
     1981 cggcacgatc gagcatgtgg cgctgggcgc gacggcgggc ggcacgctcg atgccatcac
     2041 ccacgaggcg atcgcgatga cgtcgcagca cgaggcgttc tcgcgcaacg ataccgggtg
     2101 gtcgggcgtg ctctacaaat cccctaacgc cagatacgag cacaagcttg tgcgcctcga
     2161 cctgccgacg ccgggagaca tgcgcgcacc gggcgccgcc acgggggtct tcgcgctcga
     2221 atgcgcgatg gacgaactcg ccgtcgcggt caagctcgat cccctggagt tgcgcctccg
     2281 ctgctactcc gaccgcgacc agaacgaggg actgcccttc acgagcaaga ggctccgcga
     2341 atgctaccgg cagggcgccg agaccttcgg ctggagcaaa cgcacccccg aaccgcgctc
     2401 gatgcgcgac ggcagcgaac tcgtcggctg gggcatggcg acgggcgtct gggaagcgct
     2461 gcagatgaag atgtcggccc gtatcgtgct gacctccaac ggccatgccg agatcgcatg
     2521 cgccacgtcg gacatcggca ccggcaccta cacgatcatg gcgcaggtgg cggccgacat
     2581 gctggggctg ccgatcgaca acgtcacggt caggcttggc gattccacct tgccgcgctc
     2641 gccggtcgag gggggatcgt ggaccgcggc atcggtggcg catgcaattg ccaacgctgc
     2701 tgccgaggta cgcaagcaat tgctgggcgc tgccaagaag atgccggact cgccgctcgc
     2761 gcatccggac gatgtcaccc tcgtcgacgg caagattctc gacggcaagt cagggcacgc
     2821 cgtgtcgatt gccgacgtga tgcgtggggg cgggctcgat cgcatcgagc aggagagcac
     2881 cgcgacgttc aagcaaggct cctacgcgca caacacgcac tctgcagtgt ttgccgaagt
     2941 aaagatcgac gagcagctgg gcgtgatccg cgtcacccgc gtggtgaacg cggtggccgc
     3001 cgggcgcatt ctcaacaccc acactgcccg cagccagatc ctgggcgcgg tggtgggtgg
     3061 ca
//
LOCUS       DATAIQ010000119         1574 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_375821, whole genome shotgun sequence.
ACCESSION   DATAIQ010000119 DATAIQ010000000
VERSION     DATAIQ010000119.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1574)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1574)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1574
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_375821"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1286)
                     /locus_tag="VHN20_02080"
     CDS             complement(<1..1286)
                     /locus_tag="VHN20_02080"
                     /inference="COORDINATES: protein motif:HMM:NF017745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF885 domain-containing protein"
                     /protein_id="HEX2724588.1"
                     /translation="MRNLSRRELLAGGSAVVAASCTTSRPIVTGPAVAPAPASQAQAA
                     ALLDSIAENLLWLDPEQATTLGIDNGRRAALRSQLEDRSAAGQARIAATLRADLARAE
                     SIDTSALDFATRTSVEVVKSAYRNSLEGFAMPYGDVAVGSWRNTPYVVIQNVGAYLDT
                     PRFLDSDHVIKGVSDAEAYLARLEWMGRQLDGETGRIVDARGKGLVPPAFLLDKAIGQ
                     MEAVLKGARGGGPMVESLARRSKDIPGDWSGRARAVVGQKIVPALERQLAELKAERAV
                     ATMDPGLWARPGGDAFYAWALKASTTTTMSPDEIHRMGLEQLAELHGQMDPILKKLGY
                     SQGPVGARMNALAKDKRYQFSEGDKGRAEILAYIEEWLGRFRGLMPRAFNTLVRGNLE
                     VKRLPPEEEPGAPGAYGGAGSIDGTIPGKFWINLRTT"
     gene            complement(1289..>1574)
                     /locus_tag="VHN20_02085"
     CDS             complement(1289..>1574)
                     /locus_tag="VHN20_02085"
                     /inference="COORDINATES: protein motif:HMM:NF014062.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NfeD family protein"
                     /protein_id="HEX2724589.1"
                     /translation="YSALAVMIGKRYYAEPDTPHQQVGLNEPAKRLVGRSATAVDPID
                     EHGGRVRLGDSEWSARGGPAAAGDRVEIVGVDGNCLLVGPPLRRLENNGE"
BASE COUNT          205 a          550 c          547 g          272 t
ORIGIN      
        1 gtggtgcgaa ggttgatcca gaacttgccg gggatggtgc cgtcgatcga accggcgccg
       61 ccgtaggcgc cgggcgcgcc gggttcctcc tccggcggca ggcgcttcac ctccaaattg
      121 ccgcggacca gcgtgttgaa cgcgcgcggc atcaggcccc ggaagcggcc gagccactcc
      181 tcgatataag cgaggatttc ggcgcggccc ttgtcgccct cgctgaactg gtagcgcttg
      241 tccttggcca gcgcgttcat ccgcgcgccg accggtccct ggctatagcc gagcttcttg
      301 aggatcgggt ccatctggcc gtgaagctcg gcgagctgct cgagacccat gcggtgaatt
      361 tcgtcgggcg acatcgtcgt ggtggtcgag gccttcagcg cccacgcgta aaaggcgtcg
      421 ccgccgggcc gcgcccacag gccggggtcc atcgtcgcga ccgcccgctc ggccttcagt
      481 tcggccagct gccgctcgag cgcggggacg atcttttggc cgacgacggc ccttgcgcgt
      541 ccgctccaat cgcccggaat gtccttgctc cgccgggcga ggctttcgac catcggcccg
      601 ccgccgcgcg cgcccttgag caccgcctcc atctggccga tcgccttgtc gagcaggaag
      661 gcgggcggga cgaggccctt gccgcgtgcg tcgacaattc gcccggtctc gccgtcgagc
      721 tggcggccca tccactcgag ccgggcgaga taggcctcgg catcgcttac gcccttgatg
      781 acgtggtcgc tgtcgaggaa gcgcggcgtg tcgagatagg cgccgacgtt ctggatgacg
      841 acgtagggcg tgttgcgcca gctgcccacc gcgacatcgc catagggcat ggcgaaccct
      901 tccaggctgt tgcggtaggc cgacttgacc acctcgacgc tggtccgggt ggcgaagtcg
      961 agcgcgctgg tgtcgatgct ttccgcgcgg gcgagatcgg cgcgcagggt tgccgcgatc
     1021 cgcgcctggc cggccgcgct gcggtcctcg agctgcgagc gaagggcggc gcggcggccg
     1081 ttgtcgatgc cgagcgtggt cgcctgctcg gggtcgagcc acagcaaatt ctcggcgatc
     1141 gaatcgagca gggcggcggc ctgcgcctgg ctcgccgggg ccggcgctac ggctgggccg
     1201 gtgacgatcg gcctggaggt cgtacagctt gcggcgacga ccgcgctgcc gcccgctagc
     1261 agctcgcggc gtgaaaggtt acgcatcact attctccgtt attctccagc cggcgcagtg
     1321 gcggcccgac cagcaggcaa ttaccgtcga cgccgacgat ctcgacccgg tcgcccgcgg
     1381 ctgccggccc gccgcgcgcg ctccattcgc tgtcgccgag ccgcacccgt ccgccatgtt
     1441 cgtcgatcgg gtcgaccgcg gttgcgcttc gcccgaccag cctcttggcc ggctcattga
     1501 gacccacttg ctgatgtggc gtgtcgggct cggcgtaata gcgcttgccg atcatcaccg
     1561 cgagcgcgct gtac
//
LOCUS       DATAIQ010000120         3295 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_99219, whole genome shotgun sequence.
ACCESSION   DATAIQ010000120 DATAIQ010000000
VERSION     DATAIQ010000120.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3295)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3295)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3295
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_99219"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1671
                     /gene="ggt"
                     /locus_tag="VHN20_02090"
     CDS             <1..1671
                     /gene="ggt"
                     /locus_tag="VHN20_02090"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HEX2724590.1"
                     /translation="GSPQGGQAILSDAARLLPALAGHGMVATQEAKATRIGVDILEKG
                     GNAVDAAVAVGFALAVTLPRAGNLGGGGFMLVHLAERNETVAIDYRETAPAAATRDMF
                     LDDKGEPDPKKSRDSGLAVGVPGTVRGLALALERYGSGKFALGDLIAPAEKLARDGIV
                     VDEDLADSLPRAAGRLGRFPSTRAVFFTGEAPAGRGQRLVQTDLANTLAAIGRRGPDA
                     FYKGATAEAIAAAVRSNGGVMTAQDLADYKVVVRPPVRGTYRGHDIVSMPPPSSGGVH
                     LIQILNIFEGFDAVKLAAGSADAIHLLSEAMKPAYADRATWLGDPDRVGVPVRGLTSK
                     AYAAKQRAAIDLGRARPAGEIKAGDPAPFESDQTTHFSIVDGKGNAVANTYTLNFSYG
                     LGLVADGTGVLLNNEMDDFSAKAGAINAYGLVGGDLNSVAAGARPLSSMTPTFVFKDG
                     RLVLVTGSPGGSRIISTVLQVVVNTLDFGMNVAEAVAAPRIHHQWRPDSLLVETGLSP
                     DTLKLLRDRGHKVVVGSTSGSANSIQVTPEGLMGAADPRQRGTLAAGH"
     gene            1687..2286
                     /locus_tag="VHN20_02095"
     CDS             1687..2286
                     /locus_tag="VHN20_02095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018044585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LemA family protein"
                     /protein_id="HEX2724591.1"
                     /translation="MTFVARLKLVALAVVLGGGLAGCGAVNAIPTLEERAKSAWSEVQ
                     NQYQRRADLIPNLVETVKGYAKQEQEVLTQVTEARSRASQVKVDASTITDPQKFKEYQ
                     DAQNQLSGALGRLLVTVERYPELKSNANFLALQSQLEGTENRIAVARRDYIETVRAYN
                     TEVRTIPGKWIAAVLYPDAKPMETFTATAGSERPPQVKF"
     gene            2291..3106
                     /locus_tag="VHN20_02100"
     CDS             2291..3106
                     /locus_tag="VHN20_02100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008873609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YgcG family protein"
                     /protein_id="HEX2724592.1"
                     /translation="MLAAPTRPLAHARAAIAALVAVVILASAATAARAQSLSFPALTG
                     RVVDAANVLDAAQRAALEQKLRAHEDKTTDQVVVATVRSLGGTSVEDYANRLYRHWQL
                     GQKDKNNGALLLVAPSERKVRIEVGYGLEGALTDALSKVIISTAIAPRFKAQDFAGGL
                     NAGVDAIISILTGDAEEWQRRAKVRSDETGAIDPLVAFILFFVLAMIVVSLVSGSGAR
                     RAHRTRRGSWITVGTGGGWGGGWSGGGGWSGGGGGGFSGGGGSSGGGGASGSW"
     gene            3107..>3295
                     /locus_tag="VHN20_02105"
     CDS             3107..>3295
                     /locus_tag="VHN20_02105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724593.1"
                     /translation="MLTGEQQERIAAAVREAESRTVGEILIVVAARAGTYRSVPLLYA
                     LLGSLAVPWALIWLTELSA"
BASE COUNT          515 a         1130 c         1170 g          480 t
ORIGIN      
        1 ggctcgccgc aaggaggtca ggcgatcctg tccgacgcgg cgcgcctcct gcccgcgctc
       61 gccggccacg gcatggtcgc cacgcaggag gcgaaggcga cgcggatcgg cgtcgacatc
      121 ctggaaaagg gcggcaacgc cgtcgatgcg gcggtggcgg tcggcttcgc gctcgcggtg
      181 acgctgcccc gcgccggcaa tctcggcggc ggcggcttca tgctggtgca cctcgccgag
      241 cgcaacgaga ccgttgccat cgattaccgc gagaccgcgc cggcggcggc cacgcgcgac
      301 atgttcctgg acgacaaggg cgagcccgat ccgaaaaaat cgcgcgactc cgggctcgcg
      361 gtcggcgtcc cgggcacggt gcgcggcctc gcgctggcgc tcgaacgcta cggctcgggc
      421 aagttcgcgc tgggcgacct gatcgcgccc gcggaaaagc tcgcccgcga cgggatcgtc
      481 gtcgatgagg atcttgccga ttcgctgccg cgcgccgccg gccgcctcgg gcgcttcccg
      541 tccacccgcg cggtgttctt caccggcgag gcgccggcgg ggcgggggca aaggctcgtc
      601 caaaccgatc tcgccaacac gctcgccgcc atcgggcggc gcggcccgga tgccttctac
      661 aagggcgcaa cggccgaggc gatcgcggcc gccgtgcgca gcaacggcgg cgtcatgacc
      721 gcgcaggatc tcgccgacta caaggtggtc gtgcgcccgc cggtgcgcgg cacctaccgc
      781 ggccacgaca tcgtctcgat gccgcctccg agctccggcg gcgtgcacct gatccagatc
      841 ctcaacatct tcgaaggctt cgacgccgta aagctcgcgg cgggcagcgc cgacgcgatt
      901 cacctgcttt cggaagccat gaagccggcc tacgcggatc gcgccacatg gctcggcgac
      961 cccgaccgcg tcggcgtgcc cgtgcgcggg ctgacgtcca aggcctatgc cgcgaaacag
     1021 cgcgccgcga tcgacctcgg ccgggcgcgc ccggccggcg agatcaaggc cggcgatccc
     1081 gcgcccttcg agtccgacca gaccacgcat ttctcgatcg tcgacggcaa gggcaacgcc
     1141 gtcgccaaca cctacacgct caacttctcc tacggcctcg gcctcgtggc cgacggcacc
     1201 ggcgtcctgc tcaacaacga gatggacgat ttttccgcga aagccggagc catcaatgcc
     1261 tatggcctcg tcgggggcga cttgaactcg gtcgccgcgg gggctcggcc gctgtcgtcg
     1321 atgaccccga ccttcgtgtt caaggacggc cggctggtgc tcgtcaccgg cagccccggg
     1381 ggcagccgca tcatctcgac ggtcctgcaa gtcgtggtca acacgctcga tttcggcatg
     1441 aacgtggccg aggcggtggc ggcgccgcgc attcatcacc agtggcggcc ggacagcctg
     1501 ctggtcgaaa ccggactgtc ccccgatacg ttgaagttgt tgcgcgaccg tggccataag
     1561 gtggtcgtcg gctcgacctc gggttcggcg aattcgatcc aggtcacgcc ggaggggctg
     1621 atgggtgccg ccgacccgcg ccagcggggc acgttggcgg ccgggcatta gggagatttg
     1681 gcagtgatga cctttgttgc gcgcctgaag ctggtggcgc tcgccgtggt gcttggcggc
     1741 ggtcttgcgg gctgcggcgc cgtgaacgcg atcccgacgc tcgaggaacg ggcgaaatcc
     1801 gcctggagcg aagtgcagaa ccagtaccag cgccgcgccg acctgatccc gaatctggtc
     1861 gagacggtca aaggctatgc caagcaggag caggaagtcc tcacccaggt gacggaagcg
     1921 cgctcccggg ccagccaggt caaggtcgac gcctcgacca tcaccgatcc gcaaaagttc
     1981 aaggaatatc aggacgcgca gaaccagctg tcgggcgcgc tcgggcgtct gctggtcacg
     2041 gtcgagcgct atccggagct caagtcgaac gccaacttcc tcgccctgca atcccagctc
     2101 gagggcaccg agaaccgcat cgcggtggcg cggcgcgact acatcgagac cgtccgcgcc
     2161 tacaacacgg aggtgcgcac catcccgggc aagtggatcg cggcggtcct ctaccccgac
     2221 gccaagccca tggagacgtt cacggcaacg gccggatcgg agcgcccgcc gcaagtgaag
     2281 ttctgagcga atgctcgcgg cgccgacccg gcctctcgcg catgcgcggg cggcgattgc
     2341 tgcgctcgtc gccgtcgtca ttctggcgtc ggccgccacg gcagcgcgcg cgcagagcct
     2401 gagctttccg gcgctgaccg ggcgcgtggt cgatgcggcg aatgttctcg acgcggcgca
     2461 gcgcgcggca ctggagcaga agctcagggc gcacgaggac aagaccaccg accaggtcgt
     2521 cgtcgcgacc gtgcgctcgc tcggcggcac gtcggtcgag gattacgcca accgcctcta
     2581 tcgccactgg cagctcgggc agaaggacaa gaacaacggc gccctgctgc tcgtcgcccc
     2641 gagcgagcgc aaggtccgga tcgaggtcgg atacggcctc gaaggagcgc tcaccgacgc
     2701 gctgtcgaag gtgatcatct cgaccgcgat cgcgccacgc ttcaaggcgc aggatttcgc
     2761 cggggggctc aatgccggcg tcgatgcgat catctcgatc ctgacgggcg atgccgagga
     2821 gtggcagcgc cgcgccaagg tgcgcagcga cgagacgggc gcgatcgatc cgctggtcgc
     2881 cttcatcctc ttcttcgtgc tggccatgat cgtcgtgtcg ctggtgagcg gcagcggggc
     2941 gcggcgcgcg catcgcacgc gtcgcggcag ctggatcacg gtggggaccg ggggcggttg
     3001 gggcggcggc tggtccggag gcggcggctg gagcggggga gggggagggg gattttcagg
     3061 cggcggcggc tcgtccggcg gcggcggtgc atcggggagc tggtaaatgc tgaccggcga
     3121 gcaacaggag cggatcgccg cggcggtccg tgaggccgaa agccgaaccg tcggcgagat
     3181 cctgatcgtg gtcgcggcgc gggcggggac ctatcgctcc gtcccgctcc tgtatgccct
     3241 gctcggcagc ctcgcggtgc catgggcgct gatctggctc accgagctca gcgcc
//
LOCUS       DATAIQ010000121         2311 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_49235, whole genome shotgun sequence.
ACCESSION   DATAIQ010000121 DATAIQ010000000
VERSION     DATAIQ010000121.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2311)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2311)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2311
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_49235"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(111..731)
                     /gene="ureG"
                     /locus_tag="VHN20_02110"
     CDS             complement(111..731)
                     /gene="ureG"
                     /locus_tag="VHN20_02110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016530 - metallochaperone activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0019627 - urea metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urease accessory protein UreG"
                     /protein_id="HEX2724594.1"
                     /translation="MTSRHGPLRVGIGGPVGSGKTALMEALCKLFRDRYGICAITNDI
                     YTKEDARLLTVAGALPAERIMGVETGGCPHTAIREDASINLAAVTEMTKRFPDLDLVL
                     IESGGDNLAATFSPELADLTIYVIDVAGGEKIPRKGGPGITRSDLLVINKIDLAPLVG
                     ADLAVMEADTQRMRGTRPYAFTNIRGGVGVDAVARFIEQTGGLEAR"
     gene            complement(728..1441)
                     /locus_tag="VHN20_02115"
     CDS             complement(728..1441)
                     /locus_tag="VHN20_02115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015927797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urease accessory protein UreF"
                     /protein_id="HEX2724595.1"
                     /translation="MSAATATIMVMTMTDSLLPLLAWLSPTYPVGAYAYSHGLEWAVE
                     AGAVTDETSLAAWLGDTLAHGAGRNDAVLLAAVWRAATAGDAAALAEVNDLALALAPS
                     AELRLETRQQGRSFVDATLAAWPAPPLAALAHAFGDEVAYPVAVGLAAGAHGLPVGPT
                     LEAFLLAFMQNLVSAAVRLAPIGQTGGTRVLAGLAPAIAALAHEVPGLDLDDVGSATF
                     RADLGSFLHETQYTRLFRS"
     gene            complement(1398..1889)
                     /gene="ureE"
                     /locus_tag="VHN20_02120"
     CDS             complement(1398..1889)
                     /gene="ureE"
                     /locus_tag="VHN20_02120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019904007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016151 - nickel cation binding [Evidence
                     IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA];
                     GO_process: GO:0019627 - urea metabolic process [Evidence
                     IEA];
                     GO_process: GO:0065003 - protein-containing complex
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urease accessory protein UreE"
                     /protein_id="HEX2724596.1"
                     /translation="MLRATSVVRRSAVPAGAAADTLTLDYGQRHRRRIAMTADGGLAF
                     LLDLDRATVLDDGDAVRLEDGRLVAIRAAPQRLVEIRASDALRLQKIIWHLGNRHVPA
                     EITDDAVYIAEDHVLIDMVRGLGASIARVERPFRPEGGAYDHEGGDRHVGRNGHDHGH
                     DHD"
     gene            complement(1898..>2311)
                     /gene="ureC"
                     /locus_tag="VHN20_02125"
     CDS             complement(1898..>2311)
                     /gene="ureC"
                     /locus_tag="VHN20_02125"
                     /EC_number="3.5.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010682666.1"
                     /note="ureases catalyze the hydrolysis of urea into
                     ammonia and carbon dioxide; in Helicobacter pylori the
                     ammonia released plays a key role in bacterial survival by
                     neutralizing acids when colonizing the gastric mucosa; the
                     holoenzyme is composed of 3 ureC (alpha) and 3 ureAB
                     (gamma/beta) subunits; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urease subunit alpha"
                     /protein_id="HEX2724597.1"
                     /translation="LVLWSPAFFGVKPDLVIKGGAIAAAPMGDPNASIPTPQPVHYRP
                     MFGAFGAARTSTSLTFVSAAAAADGLSGKLGVRKQLVAVENVRGGIGKKDMVLNDATP
                     VIEVDPETYDVRADGELLVCEPAKVLPMAQRYFLF"
BASE COUNT          349 a          771 c          858 g          333 t
ORIGIN      
        1 cgacatgacg ggggcgcatc cgtgtcatcg ccgggcttgt cccggccatc ccgacgcgaa
       61 gcccttaacg atcgggatgc ccggcacaag gccgggcatg acatcgaaga tcacctcgct
      121 tcgagcccgc ccgtctgctc gatgaagcgc gcgacggcgt cgacgccgac gccgccgcgg
      181 atgttggtga aggcgtacgg ccgcgtgccg cgcatgcgct gcgtgtcggc ttccatgacg
      241 gcgaggtcgg cgccgacgag gggtgcgaga tcgatcttgt tgatgacgag caggtcggag
      301 cgcgtgatgc cggggccgcc cttgcgcggg atcttctcgc cgccggcaac gtcgatcacg
      361 tagatggtga ggtcggcaag ctcgggcgag aaggtggcgg cgaggttgtc gccgcccgat
      421 tcgatcagca cgaggtccag gtccgggaat cttttggtca tctcggtgac ggcggcgagg
      481 ttgatcgagg catcctcgcg gatcgccgtg tgcgggcagc cgccggtctc gacgcccata
      541 atgcgctcgg ccggcagcgc cccggcgacg gtgagcaggc gcgcgtcctc cttggtgtag
      601 atgtcattgg tgatcgcgca gatgccgtag cggtcgcgga acagcttgca gagcgcctcc
      661 atcagcgccg tcttgccgga gccgacgggg ccgccgatgc cgacgcgcaa gggaccgtgc
      721 ctggaagtca tgagcggaaa agcctcgtgt attgcgtttc gtgcaggaac gagccgaggt
      781 ctgcgcggaa ggtggcgctg ccgacgtcgt cgaggtcaag gcccgggacc tcgtgcgcca
      841 gcgcggcgat ggccggcgca agcccggcga ggacgcgcgt gccgccggtt tggccgatcg
      901 gcgccaggcg cacggcggcc gagacgaggt tctgcatgaa ggcgagcaga aaggcctcca
      961 gcgtcggccc caccggcagg ccgtgcgcgc ctgcggcaag gccgacggca accggatagg
     1021 cgacctcgtc gccgaacgcg tgggcgagcg cggcgagggg aggggcgggc caggcggcga
     1081 gcgtcgcatc gacgaagctg cggccctgct ggcgcgtctc cagccgtagc tccgccgacg
     1141 gcgcgagcgc cagcgccagg tcgttgacct ccgcgagcgc cgcggcatcg cctgccgtcg
     1201 cggcgcgcca gacggcggcg agcaggacgg cgtcgttgcg cccggcgccg tgcgccaacg
     1261 tgtcgccgag ccatgcggcg agggacgtct cgtcggtcac cgcgcctgcc tcgaccgccc
     1321 attcgaggcc gtgcgaatag gcgtaggcgc cgaccggata ggtcggcgac agccaggcga
     1381 gcagcggcag cagcgagtca gtcatggtca tgaccatgat cgtggccgtt gcggccgaca
     1441 tgccggtcgc cgccttcgtg atcgtaggcc ccgccttccg gccggaatgg ccgttcgacg
     1501 cgcgcgatgc tggcgccgag gccgcgcacc atgtcgatca gcacgtgatc ctcggcgatg
     1561 tagacggcat cgtccgtgat ctcggccggc acatggcggt tgccgagatg ccagatgatc
     1621 ttttgcagtc gcagcgcgtc gctggcgcgg atctcgacga ggcgctgcgg cgcggccctg
     1681 atcgcgacga ggcggccgtc ctccaggcgc accgcgtcgc cgtcgtcgag caccgtggcg
     1741 cggtcgaggt cgagcaggaa cgcgagcccg ccatcggccg tcatggcgat gcggcggcgg
     1801 tggcgctgcc cgtaatcgag ggtcagcgta tccgcggccg cgccggctgg aacggcggag
     1861 cggcgcacga cgctggtggc gcgaagcacg tttggcctca gaacaggaaa tagcgctgcg
     1921 ccatcggcag gacctttgcc ggttcacaga ccagcagctc gccgtcggcg cgcacgtcgt
     1981 aggtctcggg gtcgacctcg atcaccggcg tcgcgtcgtt gagcaccatg tccttcttgc
     2041 cgatgccgcc gcgcacgttc tcgaccgcca ccagctgctt gcgcacgccg agcttgcccg
     2101 acaagccatc ggcggcggca gccgctgaga cgaaggtcag cgaagtcgac gtgcgggccg
     2161 cgccgaacgc cccgaacatg ggccggtaat gcaccggctg cggcgtcggg atcgacgcgt
     2221 tcggatcgcc catcggcgcc gcagcgatgg ccccgccttt gatgacgagg tccggcttga
     2281 cgccgaagaa ggccggcgac cacagcacaa g
//
LOCUS       DATAIQ010000122         1782 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_187807, whole genome shotgun sequence.
ACCESSION   DATAIQ010000122 DATAIQ010000000
VERSION     DATAIQ010000122.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1782)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1782)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1782
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_187807"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..867
                     /locus_tag="VHN20_02130"
     CDS             <1..867
                     /locus_tag="VHN20_02130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724598.1"
                     /translation="GKHIPGNPTVIPQNAPGAGGNIVAGRLYNLAPKDGTQIGLTFPG
                     VLVEPLLNEGGRKEYDPTRFNYLGSAHAEVLVCFVRNDAAAKSPQDLLTQELIIGATA
                     PGSTTWDFPAVENGVLGTKLKIVTGYKGSREVTLAVERGEVQGICGVGWGTIKVQFPD
                     VLSGKSFGRVFVQEDTTGHRELTGAGVPLMIALARSDEERQALQMLYAQSGFSRPFIL
                     PPDVPAERVALLRKAFEATMKDPELLAEAQKMNLDVDASTGEEVQGLVARMYETPPAV
                     IERLKKALGRKN"
     gene            912..1220
                     /locus_tag="VHN20_02135"
     CDS             912..1220
                     /locus_tag="VHN20_02135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012631356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724599.1"
                     /translation="MYLARFSYDVLPVNRQQAVDFIRREVEAARESGLNARLLVPLTR
                     SQGGPALQFEVELTKLDQLDQFRHRGVGSTKETGSWMHAFSEILASPPGVEILRVDEG
                     "
     gene            1389..1775
                     /locus_tag="VHN20_02140"
     CDS             1389..1775
                     /locus_tag="VHN20_02140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX2724600.1"
                     /translation="MKRRSILQAPVVLLVEDEPLVREFEIDVLQDAGFRVLEARTADE
                     AFDMLRGRPDVRIVFTDVDMPGSLNGFEFSRLVHQGWPEVAILVSSGKMAPSAGDLPE
                     GAAFIAKPYRPDELVEQLHKLVREEA"
BASE COUNT          315 a          593 c          601 g          273 t
ORIGIN      
        1 ggcaagcaca ttcccggcaa cccgacggtg atcccgcaga acgccccggg cgccggcggc
       61 aacattgtcg ccggccggct ctacaacctc gccccgaagg acggcaccca gatcggcctg
      121 acctttcccg gcgttctggt cgagccgctg ctgaacgagg gcggccgcaa ggaatacgac
      181 ccgacccggt tcaattatct gggcagcgcc catgcggagg tgctcgtgtg cttcgtccgc
      241 aacgatgcgg cggccaagag cccgcaggat ctcctcaccc aggagctgat catcggcgcc
      301 accgctccgg gcagcacgac ctgggacttc ccggccgtcg agaacggcgt gctcggcacg
      361 aagctgaaga tcgtcaccgg ctacaagggc tcgcgcgagg tcacgctcgc cgtcgaaaga
      421 ggcgaggtgc aggggatctg cggggtcggc tggggcacca tcaaggtgca atttccggac
      481 gtcctttccg gcaagtcgtt cgggcgagtc ttcgtccagg aagacaccac gggccatcgc
      541 gagctgaccg gcgctggggt tcccctgatg atcgccctcg ccaggagcga cgaggagcgg
      601 caggccttgc agatgctcta cgcccagagc gggttctcgc ggccgttcat cctgccgccc
      661 gatgtgcccg ccgagcgggt cgcgctgctg cgcaaggcct tcgaagcgac catgaaggac
      721 cccgagctgc tcgccgaagc ccagaagatg aacctggacg tcgatgccag cacgggggaa
      781 gaggtgcagg ggctggttgc ccgcatgtac gagacgccgc cggccgtgat cgaacgcctc
      841 aagaaggcgc ttgggcgcaa gaattagcgc gatcaggttg aagccattcc gcacgaggag
      901 cacgagaccc catgtatctt gcgcgctttt cctatgacgt gctgcccgtc aaccggcagc
      961 aggccgtcga tttcatccgg cgcgaggtcg aggcggcgcg cgagagcggc ttgaacgccc
     1021 ggctgctggt gccgctgacg cggtcgcaag gcgggccggc gctgcagttc gaggtggagc
     1081 tgaccaagct cgaccagctc gaccagttcc ggcaccgcgg cgtcggctcg accaaggaga
     1141 cgggcagctg gatgcatgcc ttcagcgaaa ttctggcgtc accgcccggc gtcgaaatcc
     1201 tgcgcgtcga cgaaggttag cgcacggtcc ggcgagaacc gccggcttcg aaaattcggg
     1261 gcgaggtggc ccccgttcgc cgaagaacga tgccgctccc gccatcctcg gcaagcgggt
     1321 gcggcgaggc gtccaggaaa ggcaggcagg gtgctggaac cacgggcaac ctgtgccgtt
     1381 gaacgaaggt gaagcgccgc agcatcctcc aagcccccgt tgtcctgctc gtcgaggacg
     1441 agcccctcgt gcgtgaattc gagatcgacg tcctgcagga cgccggcttc cgcgtgctcg
     1501 aagcgcgcac cgccgacgag gccttcgaca tgctgagggg acgtcccgac gtgcgcatcg
     1561 tctttaccga tgtcgacatg ccgggctcgc tcaacggctt cgagttctcc cggctggttc
     1621 accagggctg gcccgaggtc gcgatccttg tctcctcggg caagatggca ccgagcgctg
     1681 gcgacctgcc ggaaggcgcc gcgttcatcg ccaagccgta ccggccggac gagctggtcg
     1741 agcagctcca caagctcgtg cgcgaagagg cctaagcctt ac
//
LOCUS       DATAIQ010000123         1670 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_141836, whole genome shotgun sequence.
ACCESSION   DATAIQ010000123 DATAIQ010000000
VERSION     DATAIQ010000123.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1670)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1670)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1670
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_141836"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(185..1540)
                     /gene="der"
                     /locus_tag="VHN20_02145"
     CDS             complement(185..1540)
                     /gene="der"
                     /locus_tag="VHN20_02145"
                     /EC_number="3.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HEX2724601.1"
                     /translation="MAPAVAIVGRPNVGKSTLFNRLIGKKLALVDDRPGVTRDRREGD
                     ARLGPLEFRVIDTAGLEEAESGSLLGRMRAQTEAAIEDADVILFVIDARAGILPADKP
                     FAEMARRSGKPVVVIANKAEGGQGMTGAYDAFSLGLGDPVPFSAEHGEGLGDLFEALQ
                     PHLTRADEDDEADAEATGRGRPLKVAVVGRPNAGKSTLVNRLIGEERLLTGPEAGITR
                     DAIAIDWSWRDRPIQLYDTAGLRKRARVQDKLEKLSVADALRAVQFAEVVVVLLDATI
                     PFEKQDLSIVDLIEREGRALVIGLNKWDLVADKPGLLKELREDAARLLPQVKGAPVVP
                     ISSLAGEGLDRLMEAVFQVAEVWNRRIATAQLNDWLQGAIDANPPPAVAGRRIKIRYM
                     TQVKARPPHFAIFGNQLDALPKSYTRYLVNGLRETFDLPGVPIRMSLRTSKNPFEKQR
                     R"
BASE COUNT          230 a          569 c          602 g          269 t
ORIGIN      
        1 acggatctcg agccggctcg gggcgggaac gacggtcgag ctgctgttcc cggtcagcgg
       61 gagaggtggc ggcgaagcgg gccgggagaa aaaccggacg tgatcgccca ttcctggtcc
      121 cggcgctgac gcgcacgcga cctgcgtcca ccttgccggc tcatgctgcg aaaaaggcgg
      181 cggatcagcg tcgctgcttc tcgaacggat tcttgctggt gcgcagggac atgcggatcg
      241 gcacgccggg caggtcgaag gtctcgcgca ggccgttgac gagatagcgc gtgtaggatt
      301 tgggcagcgc gtcgagctgg ttgccgaaga tcgcgaaatg cggcgggcgc gccttgacct
      361 gggtcatgta gcggatcttg atgcgccggc cggcgaccgc gggcggcggg ttggcgtcga
      421 tcgcgccctg gagccagtcg ttgagctgcg ccgtggcgat gcgccggttc cacacctcgg
      481 cgacctggaa gacggcttcc atcagacggt cgaggccctc tccggcaagg ctcgagatcg
      541 gcaccacggg cgcgcccttg acctgcggca gaaggcgcgc ggcgtcctcg cgcagctcct
      601 tgagcagccc cggcttgtcg gcgacgaggt cccacttgtt gagcccgatc accagcgcgc
      661 gcccttcccg ctcgatcagg tcgacgatgc tgaggtcctg tttctcgaac gggatcgtcg
      721 cgtcgagcag caccacgacg acctcggcga actgcacggc gcgcagcgcg tcggcgacgg
      781 acagcttttc gagcttgtcc tgcacgcggg cgcgcttgcg cagccccgcc gtgtcgtaaa
      841 gctggatcgg gcggtcgcgc cacgaccagt cgatggcgat ggcgtcgcgc gtgatgcccg
      901 cctccggacc ggtcagcagc cgctcctcgc cgatcagccg gttgaccagg gtcgacttgc
      961 cggcattggg ccggccgacg acggcgacct tgagcggccg gcccctgcct gtcgcctcgg
     1021 cgtctgcctc atcgtcttcg tcggcgcggg tcaggtgcgg ctgcagcgcc tcgaacaggt
     1081 cgccgagacc ctcgccgtgc tcggccgaga acggcaccgg gtcgccgagc ccgagcgaga
     1141 acgcatcgta agcgcccgtc atgccctggc cgccttcggc cttgttggcg atcacgacca
     1201 ccggcttgcc tgagcgccgc gccatctcgg cgaacggctt gtcggcgggc aggatgccgg
     1261 cgcgggcatc gatcacgaac aggatcacgt cggcgtcctc gatcgcggcc tcggtctggg
     1321 cacgcatgcg gccgagcagc gagccggatt cggcttcctc cagcccggcc gtgtcgatga
     1381 cgcggaattc gagcgggccg agcctggcgt cgccttcgcg gcgatcgcgc gtcacgcccg
     1441 ggcggtcgtc gaccagcgcc agcttcttgc cgatgagcct gttgaacagc gtcgatttgc
     1501 cgacattcgg ccgtccgacg atggcgaccg cgggtgccat ggcggcctta ctgcgtcgtc
     1561 tggaccgggc cgccggccac gagcgaggtg tagatctcga gccggctgcg cagcgcctgc
     1621 ggggtgtcgc ggtcgcctgc gatctggtcg aaccagcggc cggcgccgtc
//
LOCUS       DATAIQ010000124         3049 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_422354, whole genome shotgun sequence.
ACCESSION   DATAIQ010000124 DATAIQ010000000
VERSION     DATAIQ010000124.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3049)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3049)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3049
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_422354"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..355)
                     /locus_tag="VHN20_02150"
     CDS             complement(<1..355)
                     /locus_tag="VHN20_02150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /protein_id="HEX2724602.1"
                     /translation="MIDRRAPSALRGGEKRRGRGLVAILAVLLAVLAVASLAIGPAAI
                     APLTAAQALVTDLGGASVIVREIRLPRTLLAVMIGAAHGMTGAALQGLLRNPLADASV
                     LGAPQAAALGAVLVLY"
     gene            complement(363..2390)
                     /locus_tag="VHN20_02155"
     CDS             complement(363..2390)
                     /locus_tag="VHN20_02155"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEX2724603.1"
                     /translation="MSDGKSRLCAAAFLFASSTSVLAQSAASPDIVVTATRTPQPIQR
                     AGSAITVITAEELEQSGMSPTRSLDDVFRRVPGVTLTQAGGAGQIQTVRIRGGDVRHT
                     LVLIDGIRVNDPSSTGREFDFSTLVLADIERIEVLRGPQSALYGSDAMGGVINIITKR
                     GRGAPKATVAVEGGSLGTKEMRAGVSGGTDRIDYSFGFSGLDASGFSSFGHRIGRLQR
                     FAPPNGFEPDSARRLGATGRVGVKLADDVRLEVGGGSSFNRAQYDAAFLPFPDTDSLA
                     KSHLHNGYGRLIGDAFGGTLRNTVTVFGNRVERRFRDEFLGPFGGTSRTDFMGERTGA
                     EYQGDLALGAFGLLTFGAKAERELADSFRESLSPFPSPRMRTIAAEQTTQSAFALHQI
                     TLGNRLHLSLGGRIDDVTSPDRLVIGPDANGSSTLDRFATWRATAAYEIFETGTKLRA
                     SAGTGGKAPSLFQLFSPEFGTPTLESERSIGVDAGVDQALLDGRVNVSATVFHNRYRD
                     LIDFALNPGCRPDQAFGCYFNVARAETTGLELSGDLIIVPELLRTRLTYTHMKATGQT
                     FDPLTGEFGESFELARRPKDEGRVGLVVTPNPRLSIQPSVVFVGHRYSSFNETDKLSP
                     YARLDLYMDYKLDDNFTLYVRGENLTDTRYEEVRNFGTAGVSFYGGVRATW"
     regulatory      complement(2425..2637)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00174"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="cobalamin riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="adenosylcobalamin"
                     /db_xref="RFAM:RF00174"
     gene            2737..>3049
                     /locus_tag="VHN20_02160"
     CDS             2737..>3049
                     /locus_tag="VHN20_02160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX2724604.1"
                     /translation="MKRLVAACAALACTTPLLAGAPPQRIASLNKCADQLLVTLVDAT
                     RIASVSPIAADEFAFLAERLKHLPANFGRGESILISNADLVLAGTFESHVRRQFLARQ
                     GF"
BASE COUNT          514 a         1007 c         1053 g          475 t
ORIGIN      
        1 aatagaggac gagcacggcg ccgagcgcgg cagcctgcgg cgcgccgagc accgatgcgt
       61 cggcaagggg attgcgcaac aatccttgca gcgcggcgcc ggtcatgccg tgcgcggcgc
      121 cgatcatgac ggcgagcagc gtgcgcggga gacggatctc gcgcacgatg acgctggcgc
      181 cgccgagatc cgtcacgagc gcctgcgccg cggtgagcgg cgcgatggcg gccggcccga
      241 tggcgagcga cgcgacggcg aggacggcga gcaggacggc aagaatcgcc acgagcccac
      301 gtccgcgccg cttctcccct ccccgcaacg cggagggagc ccggcgatcg atcatcgtcg
      361 catcaccatg tggcgcgcac gcctccgtag aaggaaactc cggcggtgcc gaaattgcgc
      421 acctcctcat aacgcgtgtc ggtcaggttt tcgccacgca catacagcgt gaaattgtcg
      481 tcgagcttgt agtccatgta gaggtcgaga cgcgcatacg gcgacagctt gtcggtttcg
      541 ttgaagctgg aatagcggtg gccgacgaac acgacgctcg gctggatcga aagccgcgga
      601 ttcggcgtca cgacgaggcc gacgcggcct tcgtccttcg gccgccgcgc cagctcgaag
      661 gactcgccga actcgcccgt gagcggatcg aaggtctgcc ccgtcgcctt catgtgcgtg
      721 taggtgagcc gcgtgcgcaa aagctccggc acgatgatga gatcgccgga caattcgagc
      781 ccggtggtct ccgcgcgcgc cacgttgaag tagcagccga aagcctggtc gggacggcat
      841 cccgggttca acgcgaaatc gatcaggtcg cggtagcggt tgtggaagac ggtggccgac
      901 acgttcacgc ggccgtcgag cagcgcctgg tcaaccccgg cgtcgacgcc gattgaccgc
      961 tcggactcga gcgtcggcgt gccgaattcc gggctgaaga gctggaacag cgacggcgcc
     1021 ttgccgccgg tgccggcgct ggcgcgcagc ttcgtgccgg tctcgaatat ctcgtaggca
     1081 gcagtggcgc gccacgttgc gaaccggtcg agcgtgctcg agccgttcgc atcggggccg
     1141 atgacgagac gatcggggct cgtgacgtcg tcgatgcgcc cgccaagcga cagatgcagc
     1201 cggttgccga gcgtgatctg atgcagcgcg aaggcggact gcgtcgtctg ctcggccgcg
     1261 atggtgcgca tgcgcggact cggaaagggc gaaagacttt ctcgaaaact gtccgccagc
     1321 tcgcgttcgg ccttggctcc gaaggtgagc aggccgaagg cgccgagcgc caggtcgccc
     1381 tggtattcgg cgccggttcg ctcgcccatg aagtcggtgc ggctggtgcc gccgaacggg
     1441 ccgaggaatt cgtcgcggaa gcgccgctcg acgcgattgc cgaagaccgt gacggtgttg
     1501 cgcagggtgc caccgaatgc gtcgccgatc aggcggccgt agccgttgtg aaggtggctc
     1561 ttggccagcg agtccgtgtc ggggaacggc aggaaggcgg cgtcgtattg cgcgcggttg
     1621 aagctgctgc cgccaccgac ctcaaggcga acgtcgtcgg cgagcttcac gccgacgcgg
     1681 cccgtcgcgc cgagccggcg cgcgctgtcg ggctcaaaac cattcggtgg cgcaaagcgc
     1741 tgcaggcggc cgatacgatg gccgaacgag gagaagccag aggcatcgag cccgctgaag
     1801 ccgaacgaat aatcgatccg gtcggtgccg ccggagacgc cggcgcgcat ctccttggtg
     1861 ccgaggctgc cgccttcgac cgcaaccgtc gccttcggcg cgccgcgccc gcgcttggtg
     1921 atgatgttga tcacgccgcc catcgcgtcc gacccataga gcgccgattg cggcccgcgc
     1981 aggacctcga tgcgttcgat atcggccagc accagggtgg agaaatcgaa ctcgcgcccg
     2041 gtcgagctcg gatcgttgac gcggatgccg tcgatcagga ccagcgtatg gcgcacgtcg
     2101 ccgccacgga tgcgcaccgt ctggatctgg ccggcgcctc ccgcttgcgt cagcgtgacg
     2161 ccgggcacgc gccggaagac atcgtcgagg ctgcgcgtcg gcgacatgcc ggactgctcg
     2221 agctcctcgg ccgtgatcac cgtgatggcg ctgccggcgc gctggatggg ctgcggcgtg
     2281 cgcgtcgccg tgacgacgat gtccggcgaa gcagccgatt gcgcgagaac agacgtcgag
     2341 gatgcaaaaa ggaaagcggc cgcgcacagg cggctcttgc cgtcagacat ggagacctct
     2401 cttccgcccc accggcggaa agttggggtt gcgtcacacg ctggccggtc tcctggctcg
     2461 cgggtcgtgg caccgatccg ccttcccaat cctcttgtcg agcaaggatc agtggcttga
     2521 tggatcgccg ctcaccgctc acagttgcgg gggcagctcc ggcattgaac gaagaagcgt
     2581 tcgcaccgga ttcccgtttc accctcatgc gagggcacca acgttcctca acgactattc
     2641 ctccgctcgc gacctcgcaa cggcgtccaa ggtgactccg caacgagccg gtcgacagtg
     2701 gtaaacgcgc cacagacgcg ttaaagcccg aaaatgatga aacggctcgt tgccgcgtgc
     2761 gcggcgttgg cctgcaccac gccgctgctc gcgggtgcgc cgccccagcg catcgcgtcg
     2821 ctcaacaaat gcgcggacca gctgctcgtc acgctcgtcg acgcgacgcg catcgcgtcg
     2881 gtgtcgccga tcgcggcgga tgagttcgcc ttcctggccg agcgcctcaa gcacctgccc
     2941 gccaatttcg gccgcggcga gagcatcctg atcagcaacg ccgacctcgt gcttgccgga
     3001 accttcgagt cgcacgtgcg ccggcagttc ctggcgcggc agggtttcg
//
LOCUS       DATAIQ010000125         4174 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_187862, whole genome shotgun sequence.
ACCESSION   DATAIQ010000125 DATAIQ010000000
VERSION     DATAIQ010000125.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4174)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4174)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4174
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_187862"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            75..1580
                     /locus_tag="VHN20_02165"
     CDS             75..1580
                     /locus_tag="VHN20_02165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018390034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HEX2724605.1"
                     /translation="MDILNSLAQGFGIALTPSNLLFTVIGVVIGQIIGALPGIGPSAG
                     MALLLPMTFGLPPVTATVMLAGIMYGGMYGGTLTSVLINVPGEAASVMTAVDGHQLAR
                     QGRAGSALSVAAVGSFLAGVAAVAALAVAAPALSTFALRFNAPEYFLLAALGITATAS
                     LGTSSAIKALLTALFGLMVALVGTDPILGVDRLTFGVQSLVDGFDFLPVAIGVFGIAE
                     VLVSLEMIHDAKPLTTRMRDLWPRLSDWTETRMAILRGGVIGFLIGVMPGAGPTVAAL
                     MAYVSERKFSPHPERFGRGALDGVAAAESANNSAVHGALVPMLALGIPGSASTAVLLA
                     ALVLQGIRPGPMLMQQQPDLVWGLIASMFVGNVVLLVMNLPLAPVFASMLRIPYAYLA
                     PGILALSLVGAFATTLNMYTAVVALAFGVIGYVMIKADLPRAPLVLALVLAPLMESSL
                     RQALMLSDGSLAIFVQRPLAAVLLGAVLLSLIWPLAQSLRQRRSRLPLAAP"
     gene            1634..2668
                     /locus_tag="VHN20_02170"
     CDS             1634..2668
                     /locus_tag="VHN20_02170"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX2724606.1"
                     /translation="MTKQRTIDVHAHVLTEDMMQRLRKEAPDIGPTLSEVDEHGATLK
                     IADIVQRPYPRGGWDMDVRLRDMDAYGIDVQVLSPLPQTFLYEQDGARTAALCMIQNE
                     AISALVSARSDRFLGLAGLPLQAPKRAADELRRSMQELGLRGALIGSHLEGRNLDDPE
                     LEPLWATAEELGALILIHPQKVAAGERLGGYYFKNLIGNPLETTIAAASLVFGGVLER
                     YPDLKVCLSHGGGYTPYQLGRFVHGWNVRPEGKKHLKTSPEASIRRLYFDTILHFDPA
                     LKWLVETYGAGHVMLGSDYPFDMGMFDCVKAVRELAVSQGDRDTILGRGVDAMFREQK
                     VPARSAARSA"
     gene            2703..3158
                     /locus_tag="VHN20_02175"
     CDS             2703..3158
                     /locus_tag="VHN20_02175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002716964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX2724607.1"
                     /translation="MSAHTSAAGGAGQAPGPAVLRPDKLPVTERGGGARTVQLVTAAL
                     GSKEMLNGITSFQGGAAIPLHSHNCEESVIVLEGSAVFEIGGVEHELGRYDTTWIPPD
                     VPHRFRNASATEPLRIFWTYASVTATRTLIATGETRSIASEHAGAAHGR"
     gene            3148..>4174
                     /locus_tag="VHN20_02180"
     CDS             3148..>4174
                     /locus_tag="VHN20_02180"
                     /inference="COORDINATES: protein motif:HMM:NF014653.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ldh family oxidoreductase"
                     /protein_id="HEX2724608.1"
                     /translation="MAADAKGSAAAEKASAGEGTPARATAADLSRFIAEVLQRVGMAA
                     ADAAEVAGLMAEADLTGADAHGVFRLPQYVRRIEAGGVNPKARIEVRKTGLATALVDG
                     DNGMGHLVMSRAAETAVALARDAGIGWVGARRSNHAGTAGLYAEMPVRHGMVGIYAAV
                     ANANHMAPWGGSELLLGTNPLAIGIPCGDAPPVLLDIATTVVSYGTVKNYALKGLTMP
                     PDWVVSRADGKPLTDPKRAGEGVLLPIGGYKGSGLALMLGLLAGTLNGAAFGRDVIDF
                     NADQSSETNTGHFIVALDVARFLPPDVFAAEVNRHLDDLRGSERLPGAAPIRMPGDQR
                     AARRDERS"
BASE COUNT          617 a         1465 c         1441 g          651 t
ORIGIN      
        1 cttcgtggct tggctcaacg tcgccctgcc gaagggcatt ctcggcatct aacgcgatcg
       61 tggctggaag ctgaatggat attttgaact cgctcgccca gggttttggg atcgcgctga
      121 cgccgagcaa cctgctcttc accgtgatcg gggtggtgat cgggcagatc atcggcgcgc
      181 tgcccgggat cgggccgtcg gccggcatgg ctctgctcct gccgatgacc ttcggactgc
      241 ctcccgtcac cgcgaccgtg atgctcgccg gcatcatgta tggcggcatg tacggcggca
      301 cgctgacgtc cgtgctgatc aacgtgccgg gcgaagcggc gagcgtgatg accgcggtcg
      361 acggtcacca gctggcccgg caggggcgcg cgggatccgc gctgagcgtg gccgccgtcg
      421 gctcgttcct cgccggggtc gcggccgtcg cggccctcgc ggtcgccgcg cccgcgctca
      481 gcaccttcgc cctgcgcttc aacgcgcccg aatatttcct gctcgcggcg ctcggcatca
      541 cggcgacggc gagcctgggc acgagctcgg ccatcaaggc gctgctcacg gcgctgttcg
      601 gcctcatggt ggcgctggtc ggcaccgacc cgatcctcgg ggtcgaccgg ctgaccttcg
      661 gcgtgcaaag cctcgtcgac ggcttcgact tcctgcccgt ggcgatcggc gtcttcggca
      721 tcgccgaggt cctcgtctcg ctcgagatga tccacgacgc aaagccgctc accacgcgca
      781 tgcgcgacct gtggccccgt ctcagcgact ggaccgagac gcgcatggcg atcctccggg
      841 gcggcgtgat cgggttcctg atcggcgtca tgcccggtgc cggtccgacg gtcgccgcgc
      901 tcatggccta cgtgagcgag cgcaagttca gcccgcatcc ggagcgcttc gggcgcggtg
      961 cgctcgacgg cgtcgcagcc gcggaatcgg ccaacaactc ggcggttcac ggggcgctcg
     1021 tgccgatgct ggcgctcggc attccgggct cggcgagcac ggccgtgctg ctggcagccc
     1081 tggtgctgca aggcatccgc cccggcccca tgctgatgca gcagcagccg gacctcgtct
     1141 gggggctgat cgccagcatg ttcgtcggca acgtcgtcct gctggtcatg aacctgccgc
     1201 tggcgccggt cttcgcctcg atgctgcgca ttccctacgc ctatctcgcg ccgggcatcc
     1261 tcgccctgtc gctggtcggg gcgttcgcga cgacgctgaa catgtacacc gccgtggtcg
     1321 cgctcgcctt cggggtgatc ggatacgtca tgatcaaggc ggacctgccg cgcgcgccgc
     1381 tcgtgctcgc gctcgtcctg gccccgctga tggaaagctc gctgcggcag gcgctgatgc
     1441 tgtccgatgg aagcctagcg atcttcgtgc agcggcccct ggcggcggtc ctactcggcg
     1501 cggtcctgct gtccttgatc tggccgctcg cgcaaagcct gcgccagcgt cggtcacggc
     1561 ttccgctggc ggcgccctga ccctacaagc tcaccgcgag cgatattgcc ctccaggaaa
     1621 gcagacaagc gacatgacga agcagcggac aatcgacgta cacgcccacg tcctcacgga
     1681 agacatgatg cagcgcctgc gcaaggaggc gccggatatc ggcccgacgc tgagcgaggt
     1741 cgacgagcac ggcgccacgc tcaagatcgc cgacatcgtg cagcgcccgt atccgcgcgg
     1801 cggctgggac atggacgtgc gcctgcgcga catggacgcc tacggcatcg acgtccaggt
     1861 cctctcgccg ctgccgcaaa ccttcctcta cgagcaggac ggcgcgcgca cggcggccct
     1921 gtgcatgatc cagaacgagg cgatctcggc gctggtctcg gcacggtccg accgcttcct
     1981 ggggcttgcg gggctgcctt tgcaggcgcc gaagcgcgcg gccgacgagc tccgccgcag
     2041 catgcaggag ctcggcctca ggggcgccct gatcggctcg catctcgagg gccgcaatct
     2101 cgacgatccg gagctcgagc cgctatgggc aacagctgag gagctcggcg cgctgatcct
     2161 gatccatccg cagaaggtgg cggcgggtga gcggctcggc ggctactatt tcaagaacct
     2221 gatcggcaat ccgctcgaga cgaccatcgc ggccgcctcg ctcgtcttcg gcggcgtgct
     2281 cgagcgctac cccgacctga aggtctgcct gtctcacggc ggcggctaca cgccatacca
     2341 gctcggccgc ttcgtgcatg gctggaacgt gcggccggaa ggcaagaagc acctcaagac
     2401 gtcgcccgag gcctccatcc ggcggctgta tttcgacacc atcctgcatt tcgacccggc
     2461 cctgaaatgg ctcgtcgaga cctatggcgc ggggcatgtc atgctcggga gcgactaccc
     2521 gttcgacatg ggcatgttcg actgcgtcaa ggccgtgcgc gagcttgcgg tctcacaggg
     2581 cgatcgcgat acgatcctcg gacgcggcgt cgacgcgatg ttccgggagc agaaggtccc
     2641 ggcgagatcg gccgcgcggt cggcatgagc ggcccggcgc gagggcaggg gagagtatgg
     2701 tcatgagcgc acacacatcc gccgccggag gcgcgggaca agcgccgggc ccggccgtgc
     2761 tgcggccgga caagcttccg gtcaccgaac ggggcggcgg cgcacgcacg gtgcagctcg
     2821 tcaccgcggc gctcggctcc aaggagatgc tgaatggcat cacgagcttc cagggtggcg
     2881 cggcgatccc gctgcactcg cataactgcg aggaaagcgt gatcgtgctc gagggcagcg
     2941 ccgtgttcga gatcggcggc gtcgagcatg agctgggccg ctacgacacg acctggattc
     3001 cgccggacgt gccgcaccgc ttccgcaacg cctccgcgac cgagccgctg cgcatcttct
     3061 ggacctacgc gtccgtcacg gcgacgcgca ccctgatcgc gactggcgaa acgcgttcga
     3121 tcgcgtcgga gcacgcggga gccgcgcatg gccgctgatg caaagggaag cgccgcagcg
     3181 gagaaggcat cggcagggga ggggacacct gcccgcgcca ccgccgcgga tctctcgcgt
     3241 ttcatcgccg aggtgctgca acgagtcggc atggcggccg cggacgcggc cgaggtcgcg
     3301 gggttgatgg ccgaggcgga cctgacgggc gccgacgcgc atggcgtgtt ccgcctgccg
     3361 caatacgtgc gtcgcatcga ggccggcggc gtcaatccca aagcgcgcat cgaggtgcgc
     3421 aagaccgggc tggcgacggc gctggtcgac ggcgacaacg gcatgggcca tctcgtcatg
     3481 tcgcgggccg ccgagaccgc ggtggcgctg gcgcgcgacg ccggcatcgg ctgggtgggt
     3541 gcgcgccgct ccaaccacgc cggcacggcc gggctctacg cggagatgcc ggtcaggcac
     3601 ggcatggtcg gcatctacgc ggcggtcgcc aatgccaacc acatggcgcc atggggcggc
     3661 agcgagctcc tgctcggcac caatccgctc gccatcggca tcccgtgcgg ggacgcgccg
     3721 ccggtcctcc tcgacatcgc cacgaccgtc gtttcctacg gcacggtcaa gaattatgcc
     3781 ctgaagggat tgacgatgcc gccggactgg gtcgtgagcc gggccgacgg caagccgctc
     3841 accgacccga agcgcgccgg cgaaggcgtg ctgctgccga tcggcggata caagggcagc
     3901 gggctcgccc tcatgctggg cctcctcgcc gggacgctca acggcgccgc cttcgggcgc
     3961 gacgtgatcg acttcaacgc cgatcagtcg agcgagacca atacgggcca tttcatcgtg
     4021 gcgctcgacg tggcgcgctt cctgccgccc gacgtgttcg cggccgaggt gaaccgccac
     4081 ctcgacgacc tgcgcggctc cgagcgcctt ccgggcgccg cgccgatccg catgcccggc
     4141 gaccagcgcg ccgcgcgccg cgacgaacgc tccc
//
LOCUS       DATAIQ010000126         1919 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_422382, whole genome shotgun sequence.
ACCESSION   DATAIQ010000126 DATAIQ010000000
VERSION     DATAIQ010000126.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1919)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1919)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1919
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_422382"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..236)
                     /locus_tag="VHN20_02185"
     CDS             complement(<1..236)
                     /locus_tag="VHN20_02185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX2724609.1"
                     /translation="MQVSDLFIRRPVFSIVVSLLLIVGGLAALRQLPVREYPAVDPPI
                     VSVTTVYKGASNEVVESRITEIIEGAVAGIEGIR"
     gene            complement(329..1600)
                     /locus_tag="VHN20_02190"
     CDS             complement(329..1600)
                     /locus_tag="VHN20_02190"
                     /inference="COORDINATES: protein motif:HMM:NF012739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX2724610.1"
                     /translation="MRWSGQLIVIAALAAAGAVGWHAHQTGRLAAVPVVGNIVARLTG
                     PGETTARGRRDQGPPVVDVDTVKTGRIIETHEAVGTARAFESITVTAKVAGMIQDIKF
                     QEGQKVQAGDVLLRLETDERRADIEAAVAEIRRAEAQRNELRTRLERALALRRTGSGT
                     EAQVEDLTAQVKTLDSAIASAEARRKAAEARLDDTIARAPFPGRLGTRSVSLGAYVTP
                     GTRITTLDDLSRIRLDFSVPENLVGHLKPGQVVRARSAAFGDRVFEGKVSLVDPRIDP
                     VTRSVRLTAEFANQDETLRPGMFMSVTLEVAVKDKATVVPEEAVVSEGLRQLIYVVKD
                     DKVERRVIVMGQRQGGQIEVIEGLSPGETIVVRGVQRVRAGATVRPRPLGSEGPPQAG
                     PAAPRGAAENVAPPPRGGKPAGGAAAAERRG"
BASE COUNT          289 a          665 c          653 g          312 t
ORIGIN      
        1 tggcggatgc cctcgatccc cgccacggcg ccttcgatga tctcggtgat gcggctttcg
       61 acgacctcgt tcgaggcgcc cttgtagacc gtcgtgaccg acacgatcgg cggatcgacg
      121 gccggatact cgcgcaccgg cagctgccgc agcgcggcga ggccgccgac gatgagaagc
      181 aggctgacca cgatcgagaa gaccgggcgt cggatgaaaa gatcggagac ctgcatagtc
      241 ctcactcagt gacgtgaagg caggcgcgac ctttgcaggt gggcgccgcg accctcactt
      301 gacactctcc gtcaacggag aggcgaaatc agccgcgccg ttcggccgct gcggcgccgc
      361 cggccggctt tccgccgcgc ggtggtggcg ccacgttctc ggcggcgccg cgcggcgccg
      421 ccggtcccgc ttgcggcggg ccttcgctgc cgagagggcg cggacgcacg gtcgcgccgg
      481 cgcgcacgcg ttgcacgccg cgcacgacga tcgtttcgcc cgggctcagg ccctcgatga
      541 cctcgatctg cccgccctgg cgctggccca tgacgatgac ccgccgttcg accttgtcgt
      601 ccttgacgac gtagatgagc tggcgcaggc cctcgctgac cacggcttcc tcaggcacca
      661 cggtggcttt gtcctttacc gcgacctcaa gcgtcaccga catgaacatg ccgggacgca
      721 acgtctcgtc ctgattggcg aactcggcgg tcaggcgcac gctgcgggtg accgggtcga
      781 tgcgcggatc gacgagcgat accttgccct cgaagacgcg gtcgccgaac gcggccgagc
      841 gggcgcgcac cacctgaccg ggtttcaagt gaccgacgag gttctccgga accgagaaat
      901 cgagacggat gcggctgaga tcgtcgaggg tggtgatgcg cgtgcccggg gtcacatagg
      961 cgccgaggga cacggagcgc gtgccgaggc gtccggggaa aggcgcgcgg gcgatcgtgt
     1021 cgtcgagccg ggcctccgcc gccttgcggc gcgcttcggc cgaggcgatg gcgctgtcca
     1081 gagtcttgac ctgggcggtg aggtcttcga cctgcgcctc cgtgcctgac ccggtgcggc
     1141 gcagggccag ggcacgctcg agccgcgtgc gcagctcgtt gcgctgcgcc tcggcgcggc
     1201 ggatctcggc gacggcggct tcgatatcgg cgcggcgctc gtcggtctcg aggcgcagca
     1261 ggacgtctcc ggcctgcacc ttctggcctt cctggaactt gatgtcctgg atcatgccgg
     1321 cgaccttcgc cgtcacagtg attgattcga aggcgcgcgc cgtgccgacc gcctcgtgcg
     1381 tctcgatgat gcggccggtc ttgaccgtat cgacatcgac cacgggcggc ccctgatcgc
     1441 gccggccgcg ggcggtcgtc tcgcccgggc ccgtcagccg cgcaacgata ttgccgacga
     1501 ccgggacggc cgcgagccgg ccggtctgat gggcatgcca tccaacggcg ccggctgccg
     1561 caagggcggc gatgacgatc agctgtccag accagcgcat gctcatcccg aaatcagtgg
     1621 aggatcggta gccttttggg catggcagcc attagcatac cacatgccac aatatgccgg
     1681 aggctttacg atatcttatc caccctccca aatgaactct ctgtcataat tcttcctagg
     1741 gggccgcgtc gcgcgcgagc gcaaccggtg cttgaccccg acccgcggtt cggtcatacg
     1801 cggcggcggg agacccctcc ccaccgaggg gcgcccatct ggaaggatgg aagcaacatg
     1861 gcaccgatac ccgccgcgcg cccgcgcgcg ccgttttttt cttccggccc ctgcgccaa
//
LOCUS       DATAIQ010000127         3452 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_49355, whole genome shotgun sequence.
ACCESSION   DATAIQ010000127 DATAIQ010000000
VERSION     DATAIQ010000127.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3452)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3452)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3452
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_49355"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            194..1183
                     /locus_tag="VHN20_02195"
     CDS             194..1183
                     /locus_tag="VHN20_02195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013168504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding alcohol dehydrogenase"
                     /protein_id="HEX2724611.1"
                     /translation="MNEAPPGAAARALWYVTRGRAELRPAGLPPAGPLDARVRTLWSA
                     LSRGTERLVYHGRVSMTESERMRAPMQEGDFPYPVKYGYCAVGVVEQGPGELEGRTVF
                     ALHPHQDRFVAPAAMLAPVPEHVPPRRAVLAANMETALNGLWDASAGPGDRIVVVGAG
                     VVGLLVGYLAARLPGAEVTMVDIDLSRRAVAQHLGCRFSKPLDAPGEADVVVHTSATE
                     TGLACALSCAGTEATVVEMSWYGDAQVGVPLGGDFHSRRFKLVSSQVGQVSPSRRPRW
                     THARRLEKALSLLGDERLDALVTGEVAFADLPAELPRLMAPGAPGLATVVRYG"
     gene            1234..1641
                     /locus_tag="VHN20_02200"
     CDS             1234..1641
                     /locus_tag="VHN20_02200"
                     /EC_number="4.1.2.50"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020187349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070497 -
                     6-carboxy-5,6,7,8-tetrahydropterin synthase activity
                     [Evidence IEA];
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase"
                     /protein_id="HEX2724612.1"
                     /translation="MYAVEVRDHIMIAHSFKGELFGPAQGVHGATFVVDVAFFREELT
                     DDAVVVDIGRAHEALRSILSPLNYKNLDDLPQFAGRNTTTEFLARHVFDAMAREAVAG
                     GLGPGSDGITRIRVTLHESHLARAWYEGGVRRG"
     gene            1634..2680
                     /locus_tag="VHN20_02205"
     CDS             1634..2680
                     /locus_tag="VHN20_02205"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003612391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEX2724613.1"
                     /translation="MVEVAFAIPGDLATPTGGYAYDRRMLELLPARGVSVRHIELPGS
                     FPNPTGADLAQTERQLRSTPAGAVLLIDGLAYGAIPADLIRRLDRRVVALVHHPLGLE
                     AGLAPERELELLQTEIAALAEARWVITTSMATARLLAEEFDVPSSRITVAEPGTEPAP
                     RASGTGTPVELLAVGAVSPRKAYGLLVEALSTLQHRDWRLTIAGALDRAPEAAGALRA
                     AITSSALADRILLPGAVTDAELAKLYDRADIFVSPSLFEGYGMVLTEAMARGLPMVAS
                     TGGAAAETVPETAGLKVPPGDVAALRAALEAMIVDPNLRRTFADGSWAAAHALPRWND
                     AAARIAEVVEEVAA"
     gene            2677..>3452
                     /locus_tag="VHN20_02210"
     CDS             2677..>3452
                     /locus_tag="VHN20_02210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013948215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HEX2724614.1"
                     /translation="MSGFSAEWLALREPADRRARNPEIAAALRARFAGQERVSVIDLG
                     CGAGSNLRATAAHLGPHQRWQLVDNDAALLAAARERLVQWADCAEPAGDTLRLSKGGC
                     HLEVSFAKVDLAADLELALADPVDLVTAAALFDLVSIAWIEHFARIVVGRHIAFYTAL
                     TYNGVEAWEPPHAADGAVLAAFHAHQARDKGFGPSAGPAAIDALARDFLALGYEVMPG
                     DSPWRLGADQAELIRELAHGIAVAVRETGELTEEEVGGWLA"
BASE COUNT          485 a         1202 c         1225 g          540 t
ORIGIN      
        1 ccatataagt gacgatgttg agcaccagaa cgagccgccg ccgccaccgc aacgcgcttg
       61 ccgattgcat gccggtcggc gtcatggcag cagcagggat cggctgcagc ggcgtcgtca
      121 ggcaggcggg ctcggtcatt aaggttctct acccaggcgg gacggtttga agcgcggcga
      181 ggctgaagat catatgaacg aagcaccccc gggcgccgcg gcacgcgccc tctggtacgt
      241 gacgcgcggc cgcgcggagc tgcgcccggc cggcttgccc cccgccggcc cgctcgatgc
      301 gcgcgtgcgc acgctctggt cggccttgag ccgcggcacg gaacggctcg tttaccatgg
      361 ccgcgtctcg atgaccgaaa gcgagcgcat gcgcgctccc atgcaggaag gcgattttcc
      421 ctatcccgtc aagtacggct actgcgccgt cggggtcgtc gagcaggggc cgggcgaact
      481 ggagggacga acggtgttcg ccctgcatcc tcaccaggat cgtttcgttg cgccggccgc
      541 catgctggcc ccggtgccgg aacatgtgcc gccgcgccgc gccgtgctcg cggccaacat
      601 ggaaacggct ctcaacggcc tttgggatgc cagcgccggg ccgggcgatc gcatcgtcgt
      661 ggtgggggcc ggcgtggtcg gcctgcttgt cgggtatctc gccgcccgcc tgcccggggc
      721 agaggtcacc atggtcgaca tcgatctgtc gcgccgcgcc gtcgcccagc acctcggctg
      781 ccggttcagc aagcccctcg acgcgcccgg cgaggcggac gtggtggtcc atacgagcgc
      841 gaccgagacg ggcctcgcct gcgccctgtc ctgcgccggc accgaggcga ccgtggtcga
      901 gatgagctgg tatggcgacg cgcaggttgg cgtgccgctc ggcggcgact tccacagccg
      961 gcgcttcaag ctggtctcgt cccaggtcgg gcaggtctcg ccgtcccgcc gcccgcgctg
     1021 gacgcatgcg cggcgtctcg agaaggcgct gtcgcttctc ggcgatgaac gtctggacgc
     1081 cctcgtcacg ggggaagtgg ccttcgccga tctcccggcc gaactgccgc gcctgatggc
     1141 gccgggcgcg ccggggctgg cgaccgtcgt gcgctacggt tagacgagag ccgcagagac
     1201 tatccgccga ggcaggaacg cgaggagcgc tgcatgtatg ccgtggaagt gcgcgaccac
     1261 atcatgatcg cgcatagttt caaaggcgag ctgttcgggc ccgcgcaagg cgttcatggc
     1321 gccacgttcg tggtggacgt cgccttcttc cgtgaggagc tcacggatga cgccgtcgtg
     1381 gtcgacatcg gccgtgcgca cgaggccctc aggagcatcc tgagcccgct caactacaag
     1441 aatctcgacg acctgccgca attcgcgggc cgcaacacca cgaccgagtt tctcgctagg
     1501 cacgtgttcg acgccatggc gcgtgaagca gtcgcgggcg ggcttggacc gggctccgac
     1561 gggatcacgc ggatccgcgt gacgctgcac gaatcgcatc tggcccgcgc ctggtacgag
     1621 ggcggagtgc ggcgtggttg aggtggcgtt cgcgatcccg ggcgacctcg cgacgccgac
     1681 gggcggctac gcatatgacc gtcgcatgct cgagctcctg ccggcgcgcg gcgtatccgt
     1741 gcgccacatc gagctgccgg gctccttccc caatccgacg ggggccgacc tcgcccaaac
     1801 ggagcgacag cttcgaagca cgccggcggg cgccgtcctc ctgatcgacg ggctggccta
     1861 cggggcgatc cccgccgatc tgatccggcg gcttgatcgc cgcgttgtcg cgctcgtcca
     1921 tcaccctctc ggcctcgagg cggggctggc cccggaacgg gagctcgagc tgctccagac
     1981 cgaaatcgca gcgcttgccg aggcccgctg ggtgatcacc acgagcatgg cgacggcgcg
     2041 gctcctggcc gaggagttcg acgtgccgag cagccgcatc acggtggcgg agccgggaac
     2101 cgagccggcc ccgcgcgcca gtggaacggg cacgccggtc gagctcctcg ccgtgggtgc
     2161 ggtctcgccg cgcaaggcct acggcctgct ggtcgaggcg ctgagcacgt tgcaacatcg
     2221 tgattggcgt ttgaccatcg ccggcgctct cgatcgcgct cccgaggcgg ccggcgcgct
     2281 gcgcgccgcc atcacctcct ccgcgctcgc cgaccggatc ctgctcccgg gagcagtcac
     2341 tgacgcagag ctcgcgaaac tctacgaccg cgccgacatc ttcgtctcgc catccctgtt
     2401 cgaaggctac ggcatggtgt tgacggaggc gatggcgcgc ggtctgccga tggtcgcctc
     2461 cacggggggc gccgcggccg agacggtacc ggaaaccgcc ggcctgaaag tgccgccggg
     2521 cgatgtcgcg gcgttgcgcg ctgcgctcga ggccatgatc gtcgatccga acctgcgccg
     2581 gaccttcgcg gatggctcct gggctgccgc gcacgccctg ccgcgctgga acgatgccgc
     2641 cgcgaggatc gccgaggtgg tcgaggaggt ggccgcgtga gcgggttcag cgccgagtgg
     2701 ctggcgttgc gcgagccggc ggatcgccgc gcgcgcaatc cggagatcgc ggccgcgctc
     2761 cgcgcgcgct tcgcaggaca ggagcgggtg agcgtcattg atctcggctg cggcgccggc
     2821 tcgaacttgc gcgccacggc ggctcatttg gggccgcacc agcgctggca actggtcgac
     2881 aacgatgcgg ccctgctcgc cgccgcccgc gagcggctcg tgcaatgggc cgattgcgcg
     2941 gaaccagccg gcgacacgct gcgcctgagc aagggcggct gccacctcga ggtgtcattt
     3001 gcgaaagtcg atctcgcggc cgatctggag ctggcgcttg ccgatcctgt tgacctcgtc
     3061 acggcggcgg cactgttcga ccttgtctcg atcgcctgga tcgagcattt cgcccgcatc
     3121 gtggtgggcc gccatatcgc cttctacacg gccctcacct acaacggcgt cgaggcatgg
     3181 gagccgccgc atgcggcgga cggcgccgtg cttgcggcgt tccatgcgca ccaggcgcgc
     3241 gacaagggtt ttgggccctc tgccggcccg gccgcaatcg acgcgctggc gcgcgacttt
     3301 ctcgccctcg gctacgaagt tatgcccggc gatagcccat ggcgcctggg tgccgatcag
     3361 gccgagctca tccgcgagct ggcgcacggc atcgcggttg ccgtgcgcga aaccggtgag
     3421 ctcaccgaag aggaggtcgg cggctggctc gc
//
LOCUS       DATAIQ010000128         2614 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_422494, whole genome shotgun sequence.
ACCESSION   DATAIQ010000128 DATAIQ010000000
VERSION     DATAIQ010000128.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2614)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2614)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2614
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_422494"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..937
                     /locus_tag="VHN20_02215"
     CDS             <1..937
                     /locus_tag="VHN20_02215"
                     /inference="COORDINATES: protein motif:HMM:NF014476.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724615.1"
                     /translation="MEGGSRAGYFAIRMKSDVIYEQEYNGAITQEKYCTRPGLYCGLV
                     LLTAIETGEPLAIINDGVLQHMRVGGDGGIGVKYMARDDARVVGMLGSGGMARTHMDA
                     FMTVRPGIERLQVYSPTPKNREAFGAEMREKFGIEVVVCDNPRDAYRGADIVAALTDS
                     ALPVLTGEWIEPGAHIVSVGGGGGRPPEDTLARVDVYFRFGNAPAPWGLPDLRLADEY
                     VTYAAKGDPDAFRMKRRGKRGHGEALPDRMVSFQELLNGKPGRTSRDQITYSERGNLQ
                     GNQFWAVGGVTYEKAKAQGLGHTIPTEWFLQDIRD"
     gene            1195..1464
                     /locus_tag="VHN20_02220"
     CDS             1195..1464
                     /locus_tag="VHN20_02220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012317940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HEX2724616.1"
                     /translation="MGIIWTIIIGFIAGVIAKLIMPGRNEPSGFILTTILGIIGAFVA
                     TWLGQAIGWYRADEGAGFIGAVVGAIIVLAIYGAIASRSSSTRGV"
     gene            complement(1585..1836)
                     /locus_tag="VHN20_02225"
     CDS             complement(1585..1836)
                     /locus_tag="VHN20_02225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724617.1"
                     /translation="MANAMSLFEGPTNLSFQERAISTVVGLGLAAAAAKPRPNPLLNI
                     AALLGGAYLAYRGATGRDPLNVALLGTTANDRTRIAGRS"
     gene            complement(1913..>2614)
                     /locus_tag="VHN20_02230"
     CDS             complement(1913..>2614)
                     /locus_tag="VHN20_02230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018269553.1"
                     /note="back-translocating Elongation Factor EF4; binds to
                     the ribosome on the universally-conserved alpha-sarcin
                     loop; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor 4"
                     /protein_id="HEX2724618.1"
                     /translation="ITTAPSVIYHVYLTDGSKLEMHNPADMPTEDRIDRIEEPWIEAT
                     ILVPDEHLGAVLKLCEDRRGRQKNLSYAGSRAMLVYELPLNEVVFDFYDRLKSVSKGY
                     ASFDYQITDYREGDLVKMQILVNAEPVDALSMLVHRARAEMRGRAMCEKLKDLIPQHL
                     FQIPIQAAIGGKIIARETIRALRKDVTANCYGGDITRKRKLLEKQKEGKKRMRQFGKV
                     DIPQEAFIAALKMDS"
BASE COUNT          432 a          844 c          879 g          459 t
ORIGIN      
        1 catggagggc ggctcccgcg ccggctattt cgccatccgc atgaagtccg acgtgatcta
       61 cgagcaggaa tacaacggcg ccatcaccca ggagaaatat tgcacgcgcc cgggccttta
      121 ttgcgggctc gtgctgctca ccgcgatcga gaccggcgag ccgctcgcca tcatcaacga
      181 cggcgtcctg cagcacatgc gcgtcggcgg cgacggcggc atcggcgtca aatacatggc
      241 gcgcgacgac gcgcgggtcg tcggcatgct cggctccggc ggcatggcgc gtacgcacat
      301 ggatgcattc atgaccgtgc ggcccgggat cgagcggctg caggtctaca gtcccacgcc
      361 gaagaaccgc gaggcgttcg gcgccgagat gcgggaaaaa ttcggcatcg aggtggtggt
      421 atgcgacaac ccgcgcgacg cctaccgcgg tgccgacatc gtcgccgcgc tcaccgattc
      481 cgcccttccc gtgctcaccg gcgaatggat cgagcccggc gcgcatatcg tcagcgtcgg
      541 cggcggtggc ggccggccgc ccgaggacac gctggcgcgc gtcgacgtct atttccgctt
      601 cggcaacgcg cctgccccat ggggcctgcc ggacctccgt cttgccgacg aatacgtgac
      661 ctatgccgcc aagggcgacc cggacgcctt ccgcatgaag cgtcggggca agcgcggcca
      721 tggtgaggcg ctgccagacc gcatggtcag cttccaggag ctgctcaacg gcaagccggg
      781 gcggaccagc cgcgaccaga tcacctattc cgagcgcggc aacctgcaag gcaaccagtt
      841 ctgggccgtc ggcggcgtca cctacgagaa ggcgaaggcg cagggcctcg gccacacgat
      901 cccgaccgag tggttcctgc aggacatccg cgactgaaac acctctcccg cggatctcgg
      961 gcttgcccga gatccgcttt ttatgcgcaa gtcgggccag cccgacttgc gtgcgggaga
     1021 ggtcgagact gccatcgggt cgggccgaag gcccgcccga cgataaactc cgcagaccgg
     1081 gtgagggccg gcgcgattcg ccccccctcc cgcaagccgg agagggagtt gcaccacctc
     1141 agtgaaaccg gcgggccatg ccgtgcgttc agctaggcca cttcggagag cgtcatgggt
     1201 atcatctgga ccatcatcat cggtttcatc gcaggcgtga tcgccaagct gatcatgccg
     1261 gggcgtaatg agcctagcgg cttcattttg acgacgattc tcgggatcat cggcgctttc
     1321 gtggcgacgt ggctgggcca ggcgatcggc tggtaccgcg cggacgaggg cgctggcttc
     1381 atcggggcgg tcgtcggcgc gatcatcgtt cttgcgattt acggcgccat cgcgagccgg
     1441 agttcctcca cccgcggggt gtgagccgac gtgcccgtcg cggcatgcat cggcgggttc
     1501 cggattaaaa ccgcggaaca actgcttaac aaacccggtc aggatcgttt catctgagcg
     1561 atcccggccg ggtgtgtgtc gggatcagga cctgccggcg atccgcgtgc ggtcgttcgc
     1621 cgtcgtgccg agcagggcca cgttgagcgg gtcgcggccg gtcgcgccgc gataggcgag
     1681 ataagcgccg ccgagcagcg ccgcgatgtt gagcagcggg ttcgggcgcg gcttcgccgc
     1741 cgcggccgcg aggccgagcc cgacgaccgt cgagatcgcg cgctcctgga aggacaggtt
     1801 ggtcggaccc tcgaagaggg acattgcgtt ggccattgtt tcgttctcca aagctactct
     1861 ggcgaacgcg aaaaacagcc aagtcgttcc gctcgactga acacccggag cgtcagctgt
     1921 ccatcttgag ggcggcgatg aaggcttcct gcgggatgtc gaccttcccg aactggcgca
     1981 tgcgcttctt gccttccttc tgcttctcca gaagcttgcg cttgcgcgtg atgtcgccgc
     2041 cgtagcagtt cgcagtgacg tccttgcgca gggcgcggat cgtctcgcgg gcgatgatct
     2101 tgccgccgat cgccgcctgg atcgggatct ggaacaggtg ctgcgggatc aggtccttga
     2161 gcttctcgca catagcccgt ccgcgcatct cggcgcgcgc gcggtgcacc agcatggaga
     2221 gcgcgtcgac cggctcggca ttgaccagga tctgcatctt gacgaggtcg ccttcccggt
     2281 agtcggtgat ctggtagtcg aacgaggcgt agcctttcga gaccgatttc agacggtcgt
     2341 agaagtcgaa cacgacctcg ttgagcggca actcatagac gagcatggcg cggctaccgg
     2401 catagctcag gttcttctgc cggccgcgcc ggtcctcgca cagcttgagc acggcgccga
     2461 gatgctcgtc cggcaccagg atggtggcct cgatccacgg ctcctcgatg cggtcgatgc
     2521 ggtcctcggt cggcatgtcg gccgggttgt gcatctcgag cttggagccg tcggtcagat
     2581 acacgtgata gatgacgctg ggcgccgtgg tgat
//
LOCUS       DATAIQ010000129         2082 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_422504, whole genome shotgun sequence.
ACCESSION   DATAIQ010000129 DATAIQ010000000
VERSION     DATAIQ010000129.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2082)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2082)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2082
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_422504"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            338..1519
                     /locus_tag="VHN20_02235"
     CDS             338..1519
                     /locus_tag="VHN20_02235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011443494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HEX2724619.1"
                     /translation="MPVAAGREFLSIPGPTVVPDAVLAAMQKPAVDIYAGPLVALTDG
                     LLSDMSRVFNTAGRCYIYAANGHGGWEAALTNVLSRGDKVLVLESGRFAIAWGEAAKM
                     LGAQVEVLPGDMRRAVQPEAVEAKLKADRSIRAILVTQVDTASGVQNDIEAIGKARDA
                     AGSDALLLADVVASLGCMPFDMDKWGVDVAMAASQKGLMTPPGLAFTAAGPRARAAHQ
                     RANMRTPYWDWTFRDGEAHYHKYCGTPPEHLLFGLRAALDMIFAEGLENVFARHRLLA
                     EATRRAVSAWAEGQAIGFNCPEPEERSDTVTTVTMCNGAGSQAIADYCRDKCGVVLGR
                     GLGAHEGKAFRIAHMGHVNAPMIFGTLGVVEMALAALNVPHGTGGVQAAVEFLARVVP
                     A"
     gene            complement(1540..1827)
                     /locus_tag="VHN20_02240"
     CDS             complement(1540..1827)
                     /locus_tag="VHN20_02240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724620.1"
                     /translation="MGGVKRASFALSLLVVMGAAAALARDETRGERVSGDDDPIVAAP
                     SVALAVGDVVPFDPEATGSIGKRQAKKKHQPCDRYKFYPDRPLELQFEQAC"
BASE COUNT          366 a          655 c          721 g          340 t
ORIGIN      
        1 cgtcgctgat atctaaaatc atctctctga tatacttaac gatgcggttt agatggggta
       61 gctcgacaag taacgttact aacgcggggc tcatgtatcg ggaggcgaat accctgttct
      121 gcggctgacg aagacgaaat cggtcgagga acgcccggcc atttaagttc atggccgcgc
      181 agttctgctc agatgtcggc gacggctgat acgccggcag aatgtgctag caacgcacgt
      241 ccgctcgtgc ccgcgaatgc gggtctccag ggtcacacaa agaaagaacc cgcttgccgc
      301 cttcgcggga atgcgcggag actatcgagg tcccagaatg cccgttgccg ccggccgtga
      361 attcctctcc atcccgggcc cgaccgtcgt cccggatgcc gtgctcgccg ccatgcagaa
      421 gcccgcggtc gacatctatg cggggccgct ggtcgcgctc acggatgggt tgctctcgga
      481 catgagccgc gtcttcaaca ccgcggggcg ttgctacatc tacgcagcga acggccacgg
      541 cggatgggag gccgcgctca ccaacgtgct ctcgcgcggc gacaaggtgc tggtcctgga
      601 aagcgggcgc ttcgcgatcg cctgggggga ggccgcgaag atgctgggcg cgcaggtcga
      661 ggtgctcccg ggcgacatgc gccgtgccgt gcagccggaa gcggtcgagg cgaagctcaa
      721 ggcggaccgc agcatcagag ccatcctggt gacgcaggtc gacacggcat cgggcgtgca
      781 gaacgacatc gaggcgatcg gcaaggcgcg cgacgcagcg ggaagcgacg cgctgctgct
      841 ggccgacgtg gtcgcatcgc tgggatgcat gccgttcgac atggacaagt ggggcgtcga
      901 cgtggcgatg gccgcctcgc agaaggggtt gatgacgccg cccggcctgg cgttcacggc
      961 cgcagggccg cgggcgcgcg cggcgcacca gcgcgcgaac atgcgcacgc cgtactggga
     1021 ctggaccttc cgcgacggcg aagcgcacta ccacaaatac tgcggcacgc cgccggagca
     1081 cctgctgttc ggcctgcgcg cggcgctcga catgatcttc gccgaggggc tggagaacgt
     1141 gttcgcgcgc caccgcctgc tcgcggaggc gacgcgccgc gcggtgtccg cctgggcgga
     1201 gggacaagcg atcggattca actgcccgga gccggaggag cggtccgaca cggtcacgac
     1261 cgtgaccatg tgcaacggcg ccggctcgca ggcgatcgcc gactattgcc gcgacaagtg
     1321 cggcgtcgtg ctgggccgcg ggctcggcgc gcacgagggc aaggcgtttc ggatcgcgca
     1381 tatgggccat gtcaacgcgc cgatgatatt cggcacgctc ggcgtggtgg agatggcgct
     1441 cgcggcgctg aacgtgccgc acggcacggg cggcgtgcag gccgcggtgg agttcctggc
     1501 gcgggtcgtg ccggcctgag agctggtgcg gggagctgcc tagcaggcct gctcgaactg
     1561 cagctccagc ggtctatcgg gatagaattt gtatctgtcg cagggctggt gcttcttctt
     1621 cgcctgcctc ttgcctatcg atccggtggc ctccgggtcg aaaggaacga cgtcgcccac
     1681 ggccagagct accgaaggcg cagcgacaat cggatcgtca tccccgctga cacgctcccc
     1741 tcgcgtctcg tcgcgcgcaa gggcggcggc agcgcccatg acaacgagca acgataaggc
     1801 gaaagacgcg cgtttcacgc cgcccatggc tctaactctg cgccggggcg ccctcatcca
     1861 tgcgcctgat caaggaagcc aggtcgtctg gaaggtgctc ctctaccaca ggtgcataga
     1921 gggtctgaag cgcccggccg acggccgtgg tcatcacgat gcgggggcac tcacttattc
     1981 gcggaagaaa ggcgctcgtg ccggtgctct ccatggcaaa catctccgac cggatcgatt
     2041 tgattaacct atgataagaa gccgcgacgg tcagagtggt tt
//
LOCUS       DATAIQ010000130         6393 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_422527, whole genome shotgun sequence.
ACCESSION   DATAIQ010000130 DATAIQ010000000
VERSION     DATAIQ010000130.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 6393)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6393)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6393
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_422527"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..369
                     /locus_tag="VHN20_02245"
     CDS             <1..369
                     /locus_tag="VHN20_02245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016920655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEX2724621.1"
                     /translation="REPETTRARLDAMKALGVAIAIDDFGTGHTSFKHLRSFPVDILK
                     IDGAFVQNLSRSSDDRFFVRTLVDLAHHLNITTVAEWVEDEETAHMLAEWGIDFLQGD
                     LCGAPALTGEADVAPGTCVA"
     gene            complement(394..981)
                     /gene="phaR"
                     /locus_tag="VHN20_02250"
     CDS             complement(394..981)
                     /gene="phaR"
                     /locus_tag="VHN20_02250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyhydroxyalkanoate synthesis repressor PhaR"
                     /protein_id="HEX2724622.1"
                     /translation="MATDKPPTVIKKYANRRLYHTGTSTYVTLEDLARMVREGEDFVV
                     YDAKSGEDLTRSVLTQIIFEQENKEGQNLLPITFLRQLIRFYGDSIQALVPSYLEFSI
                     DNLTREQEKLREQMRQAFGPAAFQAMQEQVRTNMALFSEAMKMFTPFAARAGDKGEPT
                     ERNSHSNSGKDVGELDGLRRQMAEMQARLDALSKK"
     gene            1225..2409
                     /locus_tag="VHN20_02255"
     CDS             1225..2409
                     /locus_tag="VHN20_02255"
                     /EC_number="2.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acetyltransferase"
                     /protein_id="HEX2724623.1"
                     /translation="MAGNGQAIVVVGAARTPVGTFNGAFANTPAHDLGKAAITAALQR
                     AKVDPGEVDEVILGQILSAGQGQNPARQAAINAGIPNEATAWGLNQLCGSGLRAVALG
                     MQQIAGGDADIIVAGGQESMSMAPHCAHMRGGTKMGDLKLVDTMIKDGLWDAFNGYHM
                     GTTAENVAQRWQLTREEQDKFAVASQNKAEAAQKAGKFKDEIVPVTVPGRKGDVVVDQ
                     DEYIRPGTTLDSVAKLRPAFSKDGTVTAGNASGINDGAAAVVLMRAADAEKRGLTPLA
                     RIVSWATAGVDPAIMGTGPIPASRRALEKAGWKVGDLDLVEANEAFAAQACAVNKDMG
                     WDPDIVNVNGGAIAIGHPIGASGARVFVTLLHEMQKRNAKRGLATLCIGGGMGVAMCV
                     ER"
     gene            2584..3309
                     /gene="phbB"
                     /locus_tag="VHN20_02260"
     CDS             2584..3309
                     /gene="phbB"
                     /locus_tag="VHN20_02260"
                     /EC_number="1.1.1.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012455532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018454 - acetoacetyl-CoA reductase
                     activity [Evidence IEA];
                     GO_process: GO:0042619 - poly-hydroxybutyrate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetoacetyl-CoA reductase"
                     /protein_id="HEX2724624.1"
                     /translation="MARVALVTGGTRGIGAAISKGLKEAGFKVAANYGGNDEAANKFK
                     AETGIPVFKFDVSDPAACAGGIKNIESEVGPVDVLINNAGITKDGFFHRMSYDQWSAV
                     IRTNLDSMFTVTRPVIDGMRNRNFGRIIIISSINGQKGQMGQTNYSAAKAGVIGFAKA
                     LAQENANKGVTVNVIAPGYIATEMVQAVPEEVLKTKILPLIPVGRLGEAEEIVRAVVF
                     LAGEEGGFITGSTLSINGGQYMI"
     gene            3412..4275
                     /locus_tag="VHN20_02265"
     CDS             3412..4275
                     /locus_tag="VHN20_02265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HEX2724625.1"
                     /translation="MSSQTATLTGFGAVALWSLLALLTVATGAVPPFQLAAMAFAVGG
                     GLGALSWLARPQAMRGLRQPAVVWALGIGGLFGYHALYFAALRLAPPAQAGLINYLWP
                     LLIVLFSAAPPGERLRAVHVVGALLGFMGVVVLVAGRGDLDLRAEDGLGYAFSFAAAF
                     VWAGYSVLSHRFGSVPTDAVAGFCLAASALSFLCHAAFETTVWPAGLVQWLALLALGL
                     GPLGAAFYLWDIGVKRGDIRMLGIASYAAPVLSTLLLVLAGFAEATRALALACVLIVA
                     GALVATLGRKA"
     gene            complement(4293..5054)
                     /locus_tag="VHN20_02270"
     CDS             complement(4293..5054)
                     /locus_tag="VHN20_02270"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX2724626.1"
                     /translation="MTDTGLVQALESRLVNAWPALETQIVDGWIVRFAKGYSKRANSA
                     SPLMPGATLDDGQIDQIVAQFQAQNLRPAFRLTSLEAPEVDGRLARRGFIEIEPTYGM
                     MGPLSEAASIEQQVELEPTVTIDDAPKPRWIKDVAASYGGDKADHLVLAEILGRIRQP
                     AAYATLSLDGRPSAWGLAVAERGYVGLFDIVVAPELRGLGLGRQIVCALMAWARKQGA
                     HNAYLQVREANTGARDLYHSLGFIDVYRYTHRVAP"
     gene            complement(5104..5871)
                     /gene="gloB"
                     /locus_tag="VHN20_02275"
     CDS             complement(5104..5871)
                     /gene="gloB"
                     /locus_tag="VHN20_02275"
                     /EC_number="3.1.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012331935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004416 - hydroxyacylglutathione hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0019243 - methylglyoxal catabolic process
                     to D-lactate via S-lactoyl-glutathione [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacylglutathione hydrolase"
                     /protein_id="HEX2724627.1"
                     /translation="MPAEIRVFRCLEDNVGALVHDPATGACAAIDAPEAEPIIKALGE
                     TGWHLTDILVTHRHADHVQGIEPLKLRYGCRVVAPLKARDEVLAADAVVREGDTVRVG
                     ELSAHVWDTPGHCRDHIAYWFAADRAVFAGDTLFTLGCGRVMESTYAEMWNSLSRFAS
                     LPDEARVYCGHDYTLSNARFALAADPDNAALKMRAADAERAKADGRMPIPSTIGEEKA
                     TNPFLRAADPALARAVKKEGADPVEVFQALREWKNRF"
     gene            6106..>6393
                     /locus_tag="VHN20_02280"
     CDS             6106..>6393
                     /locus_tag="VHN20_02280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020093723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase type 11"
                     /protein_id="HEX2724628.1"
                     /translation="MSIDVTDLRAFYASPLGHVARRLVNRAIEKFWGSPRGLRILGLG
                     YAIPYLTTVRDGAERTLAFMPASQGVVNWPATGHSASALVDPLTMPLAEASI"
BASE COUNT         1003 a         2182 c         2090 g         1118 t
ORIGIN      
        1 cgtgagcccg agacgacgcg cgcgcgcctc gatgcgatga aggcgctggg cgtcgccatc
       61 gccatcgacg atttcggcac cgggcatact tccttcaagc atctgcgcag cttcccggtc
      121 gacattctca agatcgacgg cgccttcgtg cagaacctgt cgcgatcgag cgacgatcgc
      181 tttttcgtgc gcaccctcgt cgacctcgcg catcacctca acatcacgac ggtggcggaa
      241 tgggtcgagg acgaggaaac cgcccacatg ctcgccgagt gggggatcga cttcctgcaa
      301 ggcgatcttt gtggcgcacc ggccctcacg ggcgaggccg atgtcgcgcc gggaacctgc
      361 gtcgcctgaa gcttcccgtc cgttgcgtga ggcttacttc ttcgacaggg cgtcgagccg
      421 ggcctgcatc tcggccattt gccgcctgag cccgtcgagc tcgccgacat ccttgcccga
      481 attcgaatgg gaattccgct ccgtcggctc gcccttgtcg cccgcccgcg ctgcgaacgg
      541 cgtgaacatc ttcatggctt cgctgaacaa ggccatgttg gtccgcacct gctcctgcat
      601 cgcctggaaa gccgccgggc cgaaagcctg ccgcatctgc tcacgtagct tttcctgttc
      661 tcgcgtcagg ttgtcgatcg agaactcgag atagctcggc accagtgcct gtatgctgtc
      721 gccgtagaag cggatgagct gccgcaggaa cgtgatcggc agcaggttct ggccttcctt
      781 gttctcctgc tcgaagatga tctgcgtcag cacggagcgg gtcaggtctt cgccgctctt
      841 ggcatcgtag acgacgaagt cctcgccctc gcgaaccatg cgcgccaggt cttcaagggt
      901 cacataggtc gatgttcccg tgtgatagag ccgccggttg gcgtatttct tgatgactgt
      961 gggtggcttg tcggtcgcca tggtgctccc aatccgatgc gcagcctttc agaccttcgc
     1021 gacgggggcg gcgcgcaacc atcttcgtct ttgcaaacgc agcatttcac ttgccggggc
     1081 aaacggcaag ctgtcggccg aactggtcaa aatgccggtt aacgcacctc ccccaggggc
     1141 ccgcccttga cttcatcggt gccggcgctt tgatcgatgc acacgccgct ccaggcgccc
     1201 tgcgatacag gaggagggtt ttcaatggcc ggaaatggac aggcaatcgt cgtcgtcggg
     1261 gccgcgcgca cccctgtcgg caccttcaac ggggcgttcg ccaacacccc cgcccacgac
     1321 ctcggcaagg ccgccatcac ggccgccctg cagcgcgcca aggttgaccc gggcgaggtc
     1381 gacgaggtca tcctcggcca gatcctgagc gccggtcagg gacagaaccc ggcccggcag
     1441 gccgccatca atgccggcat cccaaacgag gcgaccgcgt ggggtctgaa ccagctgtgc
     1501 ggatccggcc tgcgtgccgt cgccctcggc atgcagcaga tcgcaggcgg cgacgctgac
     1561 attatcgtcg cgggcggcca ggaatcgatg tcgatggcgc cccactgcgc gcacatgcgc
     1621 ggcggcacca aaatgggcga cctgaagctc gtcgacacca tgatcaagga cggcctgtgg
     1681 gacgccttca acggctatca catgggcaca acggccgaga acgtggccca gcgctggcaa
     1741 ctgacgcgcg aggagcagga caagttcgcg gtcgcttcgc agaacaaggc cgaagcggcc
     1801 cagaaggccg gcaagttcaa ggacgagatc gtcccggtca ccgtccccgg ccggaagggc
     1861 gacgtcgtcg tcgaccagga cgaatacatc cgcccgggca cgaccctcga ctccgtcgcc
     1921 aagctgaggc cagccttctc caaggacggc acggtgacgg ccggcaacgc gtccggcatc
     1981 aacgacggcg ccgccgcggt cgtgctgatg cgtgcagccg acgccgagaa acgcggcctc
     2041 acgccccttg cccgcatcgt ctcttgggcg accgccggcg tcgatcccgc gatcatgggc
     2101 acgggcccca tccccgcttc gcgtcgggcg ctcgagaagg ccggctggaa ggtcggcgac
     2161 ctcgacctgg tcgaggccaa cgaggcgttc gcggcgcagg cctgcgcggt caacaaggac
     2221 atgggctggg acccggacat cgtcaacgtc aacggcggcg ccatcgccat cggccatccg
     2281 atcggcgctt ccggcgcacg cgtcttcgtc acgctgctgc acgagatgca gaagcgcaac
     2341 gccaaacgcg gcctcgccac actctgcatc ggcggaggga tgggcgtcgc catgtgcgtc
     2401 gagcgctgaa cggagcgcag tgttgatcgg tcgccgctgc ttggcgaccg gtgagagcct
     2461 tgacggcggc cgcgcgaaaa ttgggtggga ccgccgccat gccttgcacg ttaacgagac
     2521 gtgcgatccg ggcttcgccg tcggcggtcc cggcatgaca agacgtgggc gagggagcga
     2581 aacatggcac gcgttgcatt ggttaccggc ggcacccgcg gcatcggggc ggccatttcg
     2641 aaggggctga aagaggccgg cttcaaggtc gcggcgaatt acggaggcaa cgacgaggcc
     2701 gccaacaagt tcaaggcgga gaccgggatc ccggtcttca agttcgacgt gtccgatccc
     2761 gccgcctgcg ccggcggcat caagaacatc gagagcgagg tgggcccggt cgacgttctc
     2821 atcaacaatg ccggcatcac caaggacggc ttcttccacc gcatgagcta cgaccagtgg
     2881 tcggcggtga tccgcaccaa tctcgactcg atgttcacgg tcacgcggcc ggtcatcgac
     2941 ggcatgcgca accgcaactt cgggcgcatc atcatcatct cgtcgatcaa cggccagaag
     3001 ggccagatgg gccagaccaa ctactcagcg gcgaaagccg gcgtgatcgg ctttgccaag
     3061 gcgctggccc aggagaacgc caacaagggc gtgaccgtca acgtcatcgc ccccggctat
     3121 atcgccaccg agatggtgca ggccgtcccg gaggaagtcc tgaagaccaa gatcctgccg
     3181 ctgatcccgg tcggccgtct cggcgaggcc gaggagatcg tgcgggccgt cgtgttcctg
     3241 gccggcgagg aaggcggatt catcaccggc tcgacgctgt cgatcaacgg cggccaatac
     3301 atgatctgat cgcgtgcctc tccccgcttg cggggcgggg tccagtctgc gaagcaggcc
     3361 tgtatggggg gcgcatccgc aaaatgcctc gtcctggggc cggggcgcgc catgtcctcc
     3421 caaaccgcca ccttgaccgg cttcggcgcg gtcgcgctct ggtcgctgct cgcgctgctg
     3481 acggtcgcga ccggtgccgt ccctccgttc cagcttgcag ccatggcctt cgccgtgggc
     3541 ggaggcctcg gcgccctgtc atggctcgcg cgtccgcagg ccatgcgcgg gttgcgtcag
     3601 ccggcggtcg tctgggccct cgggatcggc ggcctgttcg gctaccacgc gctctacttc
     3661 gcggccctgc gcctggcgcc cccggcccag gccgggctga tcaattatct ttggccactt
     3721 ctgatcgtgc tgttttcggc cgctcccccg ggtgagcggc tgcgcgccgt gcacgtggtc
     3781 ggcgcgctgc tcggattcat gggggtcgtc gtgctcgtcg ccggtcgcgg cgatctcgat
     3841 ctgcgcgccg aggatgggct gggctacgcc ttctcgtttg cggcagcctt cgtgtgggcc
     3901 ggatactcgg tgctgtcgca ccgctttggc agcgtgccca ccgatgccgt ggcgggcttc
     3961 tgccttgcag catcggcgtt gagcttcctc tgtcacgcgg ccttcgaaac gaccgtctgg
     4021 ccggccggcc tcgtgcaatg gcttgcgctg ctcgcgctcg gcctcggccc gctcggggcc
     4081 gcgttctacc tctgggacat cggcgtgaag cgcggcgata tccgcatgct cggcatcgcc
     4141 tcgtacgcgg cgccggtgct ctcgacgctg cttctcgtgc tcgccggctt cgccgaggcg
     4201 acgcgcgccc tggccctcgc gtgcgtgttg atcgtcgccg gagcgctggt cgcgacgctc
     4261 gggcgaaaag cgtgaccggc tgaagacgtg tcctatggcg cgacgcgatg cgtgtagcga
     4321 tacacgtcga tgaagccgag cgagtgatag agatcgcggg cgccggtatt ggcctcacgc
     4381 acctgcagat aggcgttgtg cgcgccctgc ttgcgcgccc aggccatcag cgcgcacacg
     4441 atctggcgcc cgaggccgag acccctgagc tccggcgcca cgacgatgtc gaacagtccg
     4501 acgtagccgc gctccgccac cgcgagtccc catgcggacg ggcgtccgtc gaggctgaga
     4561 gtggcatagg cggccggctg tcggatgcgc ccgaggattt ccgcgaggac gagatggtcg
     4621 gctttgtcgc cgccatatga agcggcgacg tccttgatcc agcgcggctt cggcgcgtcg
     4681 tcgatggtca ccgtcggctc gagttcgacc tgctgctcga tgcttgccgc ttccgataat
     4741 gggcccatca ttccataggt cggctcgatc tcgatgaagc cgcggcgcgc aagtcgcccg
     4801 tccacctccg gcgcttcgag cgacgtgagc ctgaacgccg gacgcaggtt ctgcgcctgg
     4861 aattgcgcga cgatctgatc gatctgcccg tcgtcgagcg ttgctcccgg catcaggggc
     4921 gacgccgaat tcgcccgctt cgagtagccc ttggcgaagc gcacgatcca cccgtcgacg
     4981 atctgcgtct cgagcgccgg ccaggcgttg acgagccgcg attcgagcgc ctgcacgagg
     5041 cccgtgtcgg tcatgcgcaa tcctcgcgtc gcgtcgtgat ggtgtgatcg cgcgtggccg
     5101 tcatcaaaat ctgttcttcc attcacgcag cgcctggaac acctccaccg ggtcggctcc
     5161 ctccttcttc accgcacgtg cgagggccgg gtcggcggcg cgcaggaacg ggttcgtcgc
     5221 cttctcctcg ccgatcgtcg agggaatcgg catgcggccg tccgccttgg cccgctccgc
     5281 gtcggctgcg cgcatcttaa gggccgcgtt gtcgggatcg gcagccagcg cgaagcgcgc
     5341 attcgacagc gtgtagtcgt ggccgcaata gacccgcgct tcgtccggca aggacgcgaa
     5401 ccgcgacagc gagttccaca tctccgcgta ggtagattcc atcaccctgc cgcagccgag
     5461 cgtgaacagc gtatcgcccg cgaacaccgc cctgtcggcc gcgaaccagt aggcgatgtg
     5521 gtctcggcaa tgccccggcg tgtcccagac atgtgcggac aactccccga cccgcacggt
     5581 atcgccttcg cggaccaccg cgtcggctgc cagaacctcg tcgcgcgcct tcagcggggc
     5641 gaccacgcgg cagccgtagc gcagcttcag cggctcgatc ccctgcacgt ggtcggcatg
     5701 gcgatgcgtg accaggatat ccgtgaggtg ccagccggtt tcgccgagcg ccttgatgat
     5761 cggctccgct tcgggcgcgt cgatcgcggc acaggctccc gtggcggggt cgtgcacgag
     5821 agctccgaca ttgtcctcga ggcagcggaa gacgcggatt tcagcgggca tgacggcacc
     5881 tcacttcagt gcgctcgcag gcatctcgcg acggtggcgc cccggctcgc tgccgtggat
     5941 tgccggttcg ccgcagacaa tgccttacgg agctccagag ttgtttccac ctgatggaaa
     6001 cgagtctagc gctatcatgg cttgtggttt ccggaaacat gccgcgggcg cggacttgcg
     6061 cgggaccgca cgccgtccca ttgatgaccc ccgagagagc cacccgtgag catcgacgtc
     6121 accgatctgc gcgctttcta cgccagcccg ctcggtcacg tggcgcggcg cctggtcaac
     6181 cgcgccatcg agaaattctg gggctcgcca cgcggcctgc gcatcctggg gcttggctac
     6241 gccattccgt acctgactac ggtgcgggac ggcgccgagc gcaccctggc tttcatgccg
     6301 gcctcgcagg gcgtcgtgaa ctggccggcg acgggccatt cggcatccgc gctcgtcgat
     6361 cccctgacga tgcctcttgc cgaagcctcc atc
//
LOCUS       DATAIQ010000131         2474 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_7387, whole genome shotgun sequence.
ACCESSION   DATAIQ010000131 DATAIQ010000000
VERSION     DATAIQ010000131.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2474)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2474)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2474
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_7387"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..415
                     /locus_tag="VHN20_02285"
     CDS             <1..415
                     /locus_tag="VHN20_02285"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018426386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HEX2724629.1"
                     /translation="AAEVVNMQPPDYLIKKGVLSLPCIGDGRQSGTSGTPSILNASPE
                     AAANGGLAILKTGDRIRIDLNKRTADILIPADELNERRAALQGRGGFKAPPSQTPWQE
                     IQRSMVDQLSEGMVLKPAVKYQKVAQIFGVPRDNH"
     gene            473..1327
                     /locus_tag="VHN20_02290"
     CDS             473..1327
                     /locus_tag="VHN20_02290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015933578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase/phosphoenolpyruvate mutase
                     family protein"
                     /protein_id="HEX2724630.1"
                     /translation="MPSSDPGARRAAFRRLHESGCFVIPNPWDVGTARYLRHLGFKAL
                     ATTSAGFSFSRGLPDADGDLPRDAALAHIAEIVAATDLPVNADYEAGYAHDAEGVAHN
                     VRLCVETGIAGLSIEDATGDRDKPLYDLGHAVERIRAARQAIDASGADVMLTARAECH
                     LVGHPDPLNESIRRLQAYAEAGADVLYAPGPGTRDDIKTIVDAVAPKPVNVLMSRNVG
                     LDVADVAALGARRISVGSSLNRAAWGAFIDAARLIADTGSFAGLDRAVAFDELNAFFR
                     RDLKDRSA"
     gene            1324..2001
                     /locus_tag="VHN20_02295"
     CDS             1324..2001
                     /locus_tag="VHN20_02295"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004689976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family protein"
                     /protein_id="HEX2724631.1"
                     /translation="MSGLSAWTARPRPERRTHDGRYVRLEPLDAARHGDELFAAGAGP
                     DADDLWRYLSDDPYPDRASFTSWLTKSMGDDPLFFAAIDKASGRAEGRLAFMRIDPAN
                     GVIEVGHILYGPRLAGSRAATEAIYLLARHAFDDLGYRRFEWKCNDLNERSKRAALRY
                     GFAFEGVFRQHMVVKGANRDTAWFAMLDHEWPARKAAFERWLAPDNFDGAGRQSTSLR
                     ELIMQKR"
     gene            2006..2458
                     /locus_tag="VHN20_02300"
     CDS             2006..2458
                     /locus_tag="VHN20_02300"
                     /inference="COORDINATES: protein motif:HMM:NF022072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HEX2724632.1"
                     /translation="MAIDVEKTVLIRRGRADVAAYMFDPANDAAWTSGVVASRPLTGG
                     LLQAGSRVERTTRFLGREFGYVYYVVDADKDRFVEIRVDKPFPMQARYQLDDATGGTR
                     VRIRARGEAGGFFRLAGPLLALMVGRSIAADLDNLRRELERDAARARP"
BASE COUNT          396 a          871 c          842 g          365 t
ORIGIN      
        1 cgccgccgag gtggtgaaca tgcagccgcc cgattacctc atcaaaaagg gcgtgctgtc
       61 gctgccgtgc atcggcgacg gacggcaatc gggcacgtcg ggcacgccgt cgatcctcaa
      121 cgcctcgccg gaagcggcgg ccaatggcgg cctcgcgatc ctcaagaccg gcgaccgcat
      181 ccgcatcgac ctcaacaagc gcaccgccga catcctgatt ccggccgacg agctcaatga
      241 gcgccgcgca gctttgcagg gacgtggcgg cttcaaggcg ccgccgagcc agacgccgtg
      301 gcaggagatc cagcgctcca tggtcgacca gctgtccgaa ggcatggtgc tgaagcccgc
      361 ggtcaaatac cagaaggtgg cgcagatttt cggggtgccg cgcgacaacc actgagccgg
      421 cttcacgccg gcggacgaaa gagcgctcgc gcgtgcgaaa agggagccaa gcgtgccatc
      481 gagcgatccc ggcgcccgcc gcgccgcctt tcgccggctc catgagagcg gctgcttcgt
      541 catccccaat ccctgggatg tcggcacggc gcgctatctc cggcatctcg gtttcaaggc
      601 gctcgccacc acgagcgccg gcttctcttt ctccaggggg ctgccggacg cggacgggga
      661 ccttccgcgc gacgcggccc tcgcgcatat cgccgagatc gtcgcggcga ccgatctgcc
      721 ggtgaacgcg gactacgaag ccggctacgc gcacgacgcc gaaggcgtgg cgcataacgt
      781 gcggctgtgc gtcgagacgg gcatcgccgg cctgtcgatc gaggacgcga ccggcgaccg
      841 cgacaagccg ctctacgatc tcggccatgc ggtcgagcgc atcagggcgg cgcggcaggc
      901 gatcgatgcg agcggcgcgg acgtgatgct gaccgcgcgg gcggagtgtc atctcgtcgg
      961 ccaccccgat ccgctgaacg agtcgatccg gcgcctgcag gcctatgcgg aggccggcgc
     1021 cgacgtcctc tatgcgccgg ggccgggtac gcgcgacgac atcaagacga tcgtcgacgc
     1081 agtggcgccg aagccggtca acgtcctcat gagcaggaat gtcggcctcg acgtcgccga
     1141 cgtcgccgcg ctcggcgcgc gccgcatcag cgtcggatcg tccctcaacc gtgccgcctg
     1201 gggcgccttc atcgacgcag cgcggctgat cgccgacacg ggcagtttcg cgggactcga
     1261 cagggcagtc gccttcgacg agctcaacgc gttcttccgc cgcgatctga aggaccgctc
     1321 ggcgtgagcg gcctgtccgc ctggacggcg cggccgcgtc ccgagcggcg gacgcatgac
     1381 ggccgctacg tgcgcctcga gccgctcgac gcggcgcgtc acggcgacga gctgttcgcc
     1441 gccggcgccg gcccggatgc ggacgacctg tggcgctacc tgtcggacga tccctatccc
     1501 gaccgcgcgt cgttcacgag ctggctgacg aaatcgatgg gcgacgatcc cctgttcttc
     1561 gcggcgatcg acaaggccag cggccgtgcc gagggacggc tcgccttcat gcgcatcgat
     1621 ccggccaacg gcgtcatcga ggtgggccac atcctgtacg ggccgcgcct cgccggctcg
     1681 cgggcggcga ccgaagcgat ctacctcctg gcgcgccacg ccttcgacga tctcggctac
     1741 cggcgcttcg aatggaaatg caacgacctc aacgaacgct cgaaacgcgc cgcgctgcgc
     1801 tacggctttg cgttcgaggg cgtcttccgc cagcacatgg tcgtcaaggg cgccaatcgc
     1861 gataccgcct ggttcgcgat gctcgatcac gaatggccgg cccgcaaggc ggcgttcgag
     1921 cgctggctcg cgcccgacaa tttcgacggc gcgggacggc agagcaccag cttgcgcgag
     1981 ctgatcatgc aaaagcgctg aagcgatggc catcgacgtc gagaagacgg tcctgatcag
     2041 acgcggtcgg gccgatgtcg cagcctacat gttcgacccg gcgaacgatg ccgcatggac
     2101 gagcggggtg gtggcgtcgc ggccgctcac gggaggtctc ctgcaagcag gctcgcgcgt
     2161 cgagcgcacg acccgctttc tcggccgcga gttcggctac gtctattacg tcgtcgacgc
     2221 ggacaaggac cgcttcgtcg agatccgcgt cgacaagccg tttccgatgc aggcgcgcta
     2281 ccagcttgat gacgcgacgg gcggcacgcg cgtgcgcatc cgcgcccgcg gcgaagccgg
     2341 tggcttcttc cgcctggcgg ggccgctcct ggcgctcatg gtcggccgca gcatcgccgc
     2401 cgacctcgac aatctgcgca gggagcttga gcgagacgcg gcgcgagcgc ggccgtaatc
     2461 tccctctccc gctt
//
LOCUS       DATAIQ010000132         6554 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_234116, whole genome shotgun sequence.
ACCESSION   DATAIQ010000132 DATAIQ010000000
VERSION     DATAIQ010000132.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 6554)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6554)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6554
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_234116"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..515
                     /locus_tag="VHN20_02305"
     CDS             <1..515
                     /locus_tag="VHN20_02305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008837457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF305 domain-containing protein"
                     /protein_id="HEX2724633.1"
                     /translation="QEHQQHHPGGGAGATQAQPAPAQPAPAPAQPQAPMPMGQTMQNM
                     PEQCRAMMQNMPQGCMGMMQQMMQGGMMRQGGMMQGQQGQQSEAAKAYMTAMDKMHGP
                     MMQAAQETDADVAFVKGMIPHHQGAIDMAKVVLQHGKDEQTKKWANDVIREQQREIDE
                     MRAWLNKRGK"
     gene            604..929
                     /locus_tag="VHN20_02310"
                     /pseudo
     CDS             604..929
                     /locus_tag="VHN20_02310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015821476.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="four-helix bundle copper-binding protein"
     gene            1032..2396
                     /locus_tag="VHN20_02315"
     CDS             1032..2396
                     /locus_tag="VHN20_02315"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018317129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX2724634.1"
                     /translation="MTLTLSFLGGAGTVTGSRYLLDDGEHRVLLDCGLFQGLKQLRLR
                     NWAPFPVPPKTISAAVLTHAHLDHSGFLPGLVRDGFAGKVHCSDATRELCEILLADSA
                     RLQEQDAQYANRRGFSKHRPALPLYTVNDAERALARLSPMPFDTEREVTGGLKVRLRR
                     AGHLLGAAIVECAWRGTKLVFSGDLGRYDDPMMLDPSPVEHADYIVVESTYGDRRHDR
                     GDPQVALAEIIERTTGRGGTVIVPAFAVGRAQSLLYHLEQLKSAGRLANVPIFLNSPM
                     AVDASDILCRHMDDQRLSQAACRAACGVAEYVREVEASKALNENPVPKVIVSASGMAT
                     GGRVLHHLKRYAPDPRNTILFAGFQAAGTRGAAMLAGAETVKIHGEYIPVRAEVKNLP
                     MLSAHADAEEILRWLRNFRRPPRMTFVTHGEPTASDVLRRRIQDELGWQATVPEHLEK
                     ANLE"
     gene            2393..3937
                     /locus_tag="VHN20_02320"
     CDS             2393..3937
                     /locus_tag="VHN20_02320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011583188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine phosphorylase family protein"
                     /protein_id="HEX2724635.1"
                     /translation="MSPDSRTSLVAQAEVQRSALRARRVGVHTHDQAVVFMRVDCHVC
                     RSEGLTPHSRVLLSANGRETIATLYQVSDGFVGVDEAGLSEAAWNRLGLSDGDPLFVR
                     HPDPVLSLSSVRGRVYGKRLDESALRAIITDVVSGQYSDVHLSSFITAGAAVPFDRDE
                     TVALTRAMVEVGDRLTWPDGPVLDKHSVGGLPGNRTTPIVVAIVAAHGLTMPKTSSRA
                     ITSPAGTADTMETLAPVDLDLPAIRRVVEREHGCVVWGGAVRLSPADDILIRVERALD
                     IDSEGQLVASVLSKKIAAGSTRLVLDVPVGPTAKVRSAAAGQALSSALADVAAAFGVQ
                     TTVVLSDGTQPVGRGIGPALEAMDVLAVLQRAPNAPTDLQDRACRLAGVLLELGCKAA
                     QGLGTALGAQTIRSGAAWDKFQRICEAQGGMRTPPRADQQRPLPAPAAGRVASIDNRK
                     IARLAKLAGAPERKAAGVEMHVKLGDTVEAGQPVCTLHADTPGELNYALDYAASTEDI
                     VGIDAQ"
     gene            3934..4836
                     /locus_tag="VHN20_02325"
     CDS             3934..4836
                     /locus_tag="VHN20_02325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002715966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HEX2724636.1"
                     /translation="MTSALVIPLPGNEDLAGRIALGLNAESGKIETRNFPDGETYVRV
                     AGEVTGREVVLVCTLDRPDAKFLPLTFAATTARQLGATRVGLVAPYLAYMRQDKRFRE
                     GEAVTSTIFATLLSSAFDWLVTVDPHLHRYQSLDEIYSIPAEAVHSAPLLADWIAANV
                     PAPLVIGPDIESEQWVSEVAARAKSPYRVLRKERRGDRNVEIAIPDLREFSDRTPVLV
                     DDIVSSGRTVVETARHLKRQGMLPPICMAVHALLSPDAYDALREAAATVVSTNTVKHE
                     SNRIDIAALLVEGVSPFLGDRRDG"
     gene            4829..5716
                     /locus_tag="VHN20_02330"
     CDS             4829..5716
                     /locus_tag="VHN20_02330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018317122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate transporter FocA"
                     /protein_id="HEX2724637.1"
                     /translation="MDERKPTDLPRAAEHGIDALLPAEIAAKAEDIGAKKARLDAPRL
                     TALAVLAGAFIALGAMFATTVLAGANGSMPFGMSRLVAGIVFSLGLILVVVGGAELFT
                     GNALMVMALAARKITLGEMLRAWGIVYLGNFVGAFGTAVLVVLSGQYLSANGEVASVA
                     LSIAVAKVALPFADALFLGVLCNVLVCLAVWLSLGGRGTADKILAVLFPVSAFVAAGF
                     EHSVANMYLVPLGILIKDWAPETLWSQVPISAADLASLTWPIFLFSLIPVTLGNVIGG
                     GVLVGAVYWFIYLRGERAH"
     gene            5816..6064
                     /locus_tag="VHN20_02335"
     CDS             5816..6064
                     /locus_tag="VHN20_02335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724638.1"
                     /translation="MMMYDMMSGPWAIGHLAVFAAFAALVLYPTGRILQRLGFSPIWS
                     VVAVIPLANLIGLWVIAMIPWPREGYGSPATPVSSAAR"
     gene            complement(6084..>6554)
                     /locus_tag="VHN20_02340"
     CDS             complement(6084..>6554)
                     /locus_tag="VHN20_02340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="secretion protein HlyD"
                     /protein_id="HEX2724639.1"
                     /translation="LLSPDAVQVSAGAPVRVDGWGGHALQGRVTRVDPAGFMKVSALG
                     IEEQRVKTIIDLTEPPETWSTLGHDFRVVVHIATWSSDKALVVPVGALFRSGEQWAVY
                     VVSDGRARVRAVEIGHRNSRMAEVLSGMREGEQIVLHPSDRVRNGVAVAERESR"
BASE COUNT         1058 a         2256 c         2189 g         1051 t
ORIGIN      
        1 aacaggagca ccagcagcac caccccggcg gcggggccgg ggcgacgcaa gcgcaaccgg
       61 cgccggcgca acccgcgccc gcgcccgcac agccgcaggc accgatgccg atggggcaga
      121 cgatgcagaa catgcccgag cagtgccggg ccatgatgca gaacatgccg cagggctgca
      181 tggggatgat gcagcagatg atgcaaggcg ggatgatgcg ccagggcggg atgatgcaag
      241 gccagcaggg ccagcagtcc gaggctgcga aggcctacat gaccgccatg gacaagatgc
      301 acgggccgat gatgcaggcc gcgcaggaga ccgacgccga cgtcgccttc gtcaagggca
      361 tgatcccgca ccaccagggt gccatcgaca tggcgaaggt cgtgctccag cacggcaagg
      421 acgagcagac caagaaatgg gccaacgacg taattcgcga gcagcagcgc gagatcgacg
      481 aaatgcgggc ctggctcaac aagcgcggaa aatagcggcg ccggttgttt tcgagcagag
      541 gtgccggcga cgcttgcgcc gagcacccgt cttcttcggc gcctgaatcg aaaggacacg
      601 cacatgcacc acgtctcacg cgaaatgcag gcctgcatcg atgagtgcct gcgctgctat
      661 caggtctgtc tgggtgcagc gatgagccac tgcctcgaga aaggtggcaa acatgtcgaa
      721 ccagcgcact tccgcctgat gatggcgtgt gccgagatct gccggaccgc agcccatttc
      781 atgctgatcg gcacaccgca tcacaagcac acctgccgcg agtgcgccga aatctgcgag
      841 ccagggactg cgagcgcctg ggtgacatgc agggatgcgt cgaggcatgc cggcgttgcg
      901 ccgagagctg ccgccgaatg gcggcgtgac gccttgatac cggcgtaaca agggcagccc
      961 gcctgaacct cgctcaaccc tgccactcgg tgcccgcggg gtcgagccgt cgcgcccggg
     1021 agaacgcctc gatgacactg acgctttcgt ttctcggcgg cgccggcacc gtcaccggct
     1081 cgcgctacct gctggacgac ggcgaacacc gcgttctgct cgactgcggc ctgttccagg
     1141 gcctcaagca gctccggctg cgcaactggg cgcccttccc tgtgccgccg aagaccatct
     1201 cggccgcggt cctcacgcac gcccacctcg accactccgg attcctgccg gggctcgtgc
     1261 gcgatggttt cgccggcaag gtgcattgct ccgacgcgac gcgtgagctc tgcgagatcc
     1321 tcctcgccga cagcgcccgc cttcaggagc aggacgccca atacgccaac cggcgcggct
     1381 tctccaagca caggccggcc ctgccgctct acaccgtgaa cgatgccgag cgcgcgctgg
     1441 cgcggctttc gccgatgccg ttcgacacgg agcgcgaggt caccggcggc ctcaaggtgc
     1501 ggctgcgccg cgccggccat ctcctgggcg cggcaatcgt cgaatgcgca tggcgcggga
     1561 cgaagctcgt cttctcgggc gatctcggcc gctacgacga tccgatgatg ctcgatccaa
     1621 gcccggtgga gcacgcggat tatatcgtcg tcgagtccac ctatggcgac cggcgtcacg
     1681 accgcggcga cccgcaggtc gcgctcgccg agatcatcga gcgcacgacc ggccgtggcg
     1741 gtaccgtgat cgttccggcc tttgcggtcg gccgggcgca aagtctcctc taccatctcg
     1801 aacagctgaa gagcgccggc cggctcgcca atgtgcccat cttcctgaac agcccgatgg
     1861 cggtcgacgc gagcgacatc ctgtgccggc acatggacga ccagaggctt tcgcaagccg
     1921 cctgcagggc ggcttgcggc gtcgcggaat acgtgcgcga ggtggaggcg tcgaaggcgc
     1981 tcaacgaaaa cccggtgccg aaggttatcg tctccgccag cggcatggcg acgggcggac
     2041 gcgtcctgca ccacttgaag cgttacgcgc ccgatccgcg caacacgatc ctcttcgccg
     2101 ggttccaggc cgccggcacg cgcggcgcgg ccatgctcgc gggagccgag acggtcaaga
     2161 tccacggcga atacatcccg gtgcgcgcgg aggtgaagaa cttgccgatg ctctcagcgc
     2221 acgccgacgc ggaggagatc ctgcgctggc tccgcaactt ccgccggccc ccgcggatga
     2281 cgttcgtcac gcacggcgag ccaacggcct cggacgtctt gaggcgccgc atccaggacg
     2341 agctcgggtg gcaggcgaca gtgcccgagc atctcgagaa ggcgaacctg gaatgagccc
     2401 cgattcgcgt acgtccctcg ttgcccaagc ggaggtccag cgcagcgccc tgcgtgcgcg
     2461 gcgtgtcggc gtgcacacgc acgaccaggc cgtcgtgttc atgcgcgtcg actgccacgt
     2521 ctgtcgctcc gaaggcctga cgccgcactc gcgcgtgctc ctcagtgcga acggacggga
     2581 gaccatcgcc accttgtatc aggtctccga cggcttcgtc ggtgtggacg aggccggatt
     2641 gtcggaagcg gcatggaacc gcctggggct gagtgacggc gatcccttgt tcgtccgcca
     2701 tccggatccg gtgctctcgc tcagcagcgt gcggggccgc gtctacggca agcgcctcga
     2761 cgagtcggcc ctacgcgcca tcatcaccga cgtggtgagc gggcagtatt ccgacgtcca
     2821 tctgtcgtca ttcatcaccg cgggggcggc agtgccgttc gaccgtgacg agacagtcgc
     2881 cctcacgcgc gccatggtgg aagtcggtga ccggctgacg tggccggacg ggccggtgct
     2941 cgacaagcac tcggtcggcg ggctccccgg caaccggacg acgccgatcg tcgtggccat
     3001 cgtggccgcg cacggattga cgatgcccaa aacctcctcg cgcgcgatca cctcgccggc
     3061 cgggacggcg gacaccatgg aaacgctagc acccgtggac ctcgacctgc cggccatccg
     3121 gcgtgtcgtt gagcgtgaac acggctgcgt cgtgtggggc ggagccgtga ggctgagccc
     3181 ggccgacgac atcctgatcc gcgtcgagcg cgcgctggac atcgacagcg agggccagct
     3241 ggtcgcgtcg gtgctgtcga agaagatcgc cgcgggctcg acccgtctcg ttctcgacgt
     3301 accggtcggg ccgactgcga aggtcaggag cgccgcggcc gggcaggccc tttcctcggc
     3361 tctggccgac gtcgccgcgg cgttcggcgt gcagaccacc gttgtcctct cggacggcac
     3421 gcagccggtc ggacgcggca tcggaccggc gctcgaggcg atggacgtgc tggcggtctt
     3481 gcagcgggcg ccgaatgccc ccactgacct gcaggaccgc gcatgccggc tcgctggcgt
     3541 cctcttggag ctcgggtgca aggcagcgca ggggctcggc acggccctgg gggcgcaaac
     3601 catccgttct ggcgctgcgt gggacaagtt ccagcgcatc tgcgaggccc agggtggcat
     3661 gcgtacgcca ccgcgggcgg accagcaacg cccgttgccg gcaccggccg cagggcgggt
     3721 cgcgtctatc gataaccgca agatcgcgcg tttggccaag ctcgctgggg cgcccgagag
     3781 gaaggcggcc ggcgtcgaga tgcacgtgaa gctcggcgac acggtcgagg cggggcagcc
     3841 cgtctgcacg ttgcacgcgg acaccccggg cgaactgaac tacgccctgg actacgctgc
     3901 ctccaccgag gacatcgttg ggatcgacgc gcaatgacat ccgcgctcgt catcccgctg
     3961 cccggcaacg aggacctcgc cggccgcatc gcgctcgggc tgaatgccga gagcggcaaa
     4021 atcgagacgc gcaacttccc tgatggcgag acctatgttc gcgttgccgg cgaggtgact
     4081 ggccgcgagg tcgtgctcgt ctgcacgctc gatcggccgg acgcgaagtt cctgccgctg
     4141 acgttcgcgg cgacgacggc acgtcaactc ggcgcgacgc gcgtcgggct cgtcgcgccg
     4201 tatctcgcct acatgcggca ggacaagcgc ttccgcgagg gcgaggcagt cacgtcgacg
     4261 atcttcgcga ccttgctgtc atcggccttc gactggctgg tcaccgtcga cccgcacctc
     4321 caccgctacc aatcgctgga cgagatctac tccattccgg ccgaggcggt tcattccgcc
     4381 ccgctgctgg ccgattggat cgccgcgaat gtgccggccc ctctcgtgat cgggcccgac
     4441 atcgaaagcg agcaatgggt gagcgaagtg gccgcgcgcg cgaaatctcc ttaccgcgtg
     4501 ctgcgcaagg agcgccgcgg cgaccgcaac gtcgagatcg cgattcccga ccttcgcgag
     4561 ttcagcgacc gcacgcccgt gctcgtggac gacatcgtgt cctctggacg taccgtcgtg
     4621 gagacagcgc gacacctgaa gaggcaaggg atgctgccgc cgatctgcat ggcggtgcac
     4681 gcgctgctct cacctgacgc ttacgatgcg ctgcgtgagg cggccgccac cgtcgtctcg
     4741 acaaacacgg taaagcacga aagcaacagg atcgacatcg cggccctgct tgtggaaggc
     4801 gtgtcgccat tccttgggga ccgacgcgat ggatgagaga aagccgacgg accttccgag
     4861 agccgcggaa cacggcatcg acgcgctgct gcccgccgaa atcgccgcga aggcagagga
     4921 catcggggcc aagaaggcga ggctcgacgc gccgcgcctt acggcgctgg cggtcctcgc
     4981 aggagcgttc atcgcccttg gtgccatgtt cgccacgacc gtgctggccg gcgccaacgg
     5041 ctcgatgccg ttcgggatga gccggctcgt cgccggcatc gtgttctcgc tcggcttgat
     5101 cctggtcgtc gtcggcggcg cggagctgtt cacgggcaat gcgctcatgg tcatggcgtt
     5161 ggccgcgcgc aagatcaccc tcggtgagat gctgcgcgcc tggggcatcg tctatctcgg
     5221 caattttgtc ggggcgttcg gcaccgccgt gctcgtcgtc ctctcgggtc aatacctctc
     5281 cgccaatgga gaggtggcga gcgtcgcgct ctccatcgcc gtcgcgaagg tggcgctacc
     5341 gttcgccgac gcgctcttcc tcggcgtcct gtgcaatgtc ctcgtctgcc tcgcggtctg
     5401 gctgtcgctc ggcggtcggg gcacggcgga caagatcctg gcggttctct ttccggtatc
     5461 ggcattcgtc gcggctgggt tcgagcactc ggtcgcgaac atgtatctcg tgccgctcgg
     5521 catcctgatc aaggattggg caccggagac gctctggtcg caggtcccga tcagtgccgc
     5581 cgatcttgcg tcgctcacgt ggccgatctt cctgttcagc ctcattccgg tcactctcgg
     5641 aaacgtgatc ggcggcggcg tcttagtcgg cgccgtctac tggttcatct atcttcgcgg
     5701 cgagcgcgcc cattgatcca gcgcaaggtg cgcgtgtccc gtcggcgaca gaatggcggc
     5761 atatccgccg ggcgcgcccg accggccgct caccggctgt tgcgggactg atgccatgat
     5821 gatgtacgac atgatgagcg gcccctgggc catcgggcac ctcgcggtct tcgccgcatt
     5881 cgcggccctg gtgctgtacc cgaccggtcg catcctccag aggctcggct tctccccgat
     5941 ctggtctgtc gtcgcggtga tcccgctcgc caatctcatc ggcctgtggg tgatcgcgat
     6001 gatcccgtgg ccgcgtgaag gttacggttc gccggccacc ccggtgtcca gcgcggcccg
     6061 gtaaaccggc gcttgtagga cgatcagcgg ctctcgcgct cggcaactgc gacgccgttc
     6121 cgcacgcgat cgctcgggtg cagcacgatc tgctcgccct cgcgcatgcc cgagagcacc
     6181 tctgccatcc tgctgttccg gtggccgatc tcgacagccc tcacccgggc tcgaccgtcg
     6241 ctcacgacgt agacggccca ttgctctccc gaccggaaaa gcgcgccgac cggcacgacg
     6301 agcgccttgt cgctgctcca cgtcgcgatg tggaccacga cgcggaagtc gtggccgagc
     6361 gtggaccatg tctccggagg ctccgtgagg tcgatgatgg tcttgacgcg ctgctcctcg
     6421 atgccgagcg cggacacctt catgaacccg gctggatcca cgcgcgtcac acgcccttgc
     6481 aacgcgtggc cgccccagcc gtcaacacgc accggcgcgc cggcgctgac ctgcaccgcg
     6541 tccggcgaca ggag
//
LOCUS       DATAIQ010000133         2096 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_99801, whole genome shotgun sequence.
ACCESSION   DATAIQ010000133 DATAIQ010000000
VERSION     DATAIQ010000133.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2096)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2096)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2096
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_99801"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1190
                     /gene="hemA"
                     /locus_tag="VHN20_02345"
     CDS             <1..1190
                     /gene="hemA"
                     /locus_tag="VHN20_02345"
                     /EC_number="2.3.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003870 - 5-aminolevulinate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006783 - heme biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="5-aminolevulinate synthase"
                     /protein_id="HEX2724640.1"
                     /translation="LKAERRYRVFADLERQAGRFPAALWHGPEGPREIVVWCSNDYLG
                     MGQNPAVVAALADTARQMGAGAGGTRNISGNSHPVVTLEAELADLHGKEAALVFTSGY
                     ISNQAGIATIARLIPDCLILSDALNHNSMIEGVRQSGCAKAIFRHNDVTHLEELLVAA
                     GDRPKVIVFESVYSMDGDVAPIGRICDLAERYGAMTYLDEVHAVGMYGPRGGGVAERD
                     AVMDRVDVIEGTLAKAFGVMGGYISGTAALVDAVRSYAPGFIFTTALPPAVAAAATVS
                     VRHLKQSALERQAQQRQVARTKSALAAAGLPLMPTQTHIVPVMVGDAEACKAATDRLL
                     TRHNIYIQPINYPTVPRSTERLRITPSPMHRDTHIDALTDALVEVWSALGLPFAPRAQ
                     AAE"
     gene            1316..1390
                     /locus_tag="VHN20_02350"
     tRNA            1316..1390
                     /locus_tag="VHN20_02350"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1348..1350,aa:Thr,seq:ggt)
     gene            1523..>2096
                     /locus_tag="VHN20_02355"
     CDS             1523..>2096
                     /locus_tag="VHN20_02355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724641.1"
                     /translation="MAVFDARGSHYFVALEAGSLEFIRKHASSPTSYSWDAVSFTRAF
                     AHGTGITVRPGGLPFRGTATSLDLDLSFGSPRFDGIDVVITGFSVPLASLVSPREDGR
                     IASGWVNLLAGNDTVWAPLNAGARLYGDTPTVYFWAGTENFVGGDDRINGGRAGDQTL
                     SGDFLLVGGLGPSVVDATGGDDLVITNLLSG"
BASE COUNT          321 a          757 c          683 g          335 t
ORIGIN      
        1 gcctcaaggc ggaacggcgc taccgcgtct tcgctgacct cgagcgccag gccggccgct
       61 ttccggcggc gctctggcac ggccccgagg ggccgcgtga gatcgtggtg tggtgctcca
      121 acgattacct cggcatgggc cagaacccgg ccgtggtcgc cgccctggcc gacaccgcgc
      181 ggcagatggg ggccggcgcc ggcggcacgc gcaacatttc cggcaacagc catccggtcg
      241 tcaccctcga ggccgagctg gccgatctgc acggcaagga agccgccctc gtcttcacgt
      301 ccggctacat ctccaaccag gccggcatcg ccacgatcgc caggctgatc ccggactgcc
      361 tgatcctgtc cgacgccctc aaccataatt ccatgatcga aggcgtgcgc cagtcgggct
      421 gcgccaaggc gatcttccgg cacaacgacg tcacccatct cgaagagctc ctggtcgccg
      481 ccggcgatcg gccgaaggtg atcgtgttcg agagcgtcta ttcgatggac ggcgacgttg
      541 ccccgatcgg gcgcatctgc gacctcgccg agcgatacgg cgccatgacc tatctcgacg
      601 aggtgcatgc cgtcggcatg tacgggccgc gcggcggcgg cgtcgccgag cgcgacgccg
      661 tcatggaccg cgtcgacgtc atcgagggca ccctcgccaa ggcctttggg gtgatgggcg
      721 gctacatctc cggaaccgcc gccctggtcg atgccgtgcg cagctatgcg ccgggattca
      781 tcttcacgac cgccctgccg ccggccgtcg ccgccgccgc caccgtctcg gtgcgccacc
      841 tcaagcagtc ggcgctcgag cgccaggccc agcagcgcca ggtcgccagg accaagtccg
      901 cgctcgccgc cgccggcctg ccgctgatgc cgacccagac gcatatcgtc ccggtcatgg
      961 tcggcgacgc ggaggcctgc aaggccgcaa cggaccggct gctcaccagg cacaatatct
     1021 atatccagcc gatcaactac ccgaccgtcc cgcgcagcac cgagcgcctg cgcatcaccc
     1081 cgtcgccgat gcaccgcgac acgcatatcg acgcgctcac ggatgccctc gtcgaggtct
     1141 ggtcggcgct gggcctgccg ttcgcgccgc gcgcccaggc agccgagtga cggggcggga
     1201 cgggtcccgc gtggcgccgc ggcgacaggc ggcgacggat agcggacgcg tcgccgcagc
     1261 gtgttgcgtt acgcggcgcg atcctttatc agccgccgaa ctcgtcgaga accgtgctgc
     1321 cgtagctcag tggtagagca ctcccttggt aagggagagg tcgagagttc aatcctctct
     1381 ggcagcacca ttcctcccgt aatgcgaaga catgccctga ccttcacgcg cgcgttgcgg
     1441 tgaagctgct tgacaattgc cacaatcgcg ccagcaaatt ggtcaggcaa cggcgtcaag
     1501 cccggcttga gaggggatga ccatggcggt tttcgacgca cgtggctctc attacttcgt
     1561 ggcgcttgag gcgggctcgc ttgagttcat ccgcaagcac gccagcagcc cgacctcgta
     1621 ttcctgggac gcggtctcgt tcacgcgcgc cttcgcgcat ggcaccggca tcacggtcag
     1681 gcccggcggc ctgccgttcc gcggcaccgc gacgagcctc gacctcgacc tgtccttcgg
     1741 ctcgccgcgc ttcgacggca tcgacgtcgt cataaccggc ttcagcgtgc cgctggcgtc
     1801 gctggtgtcg ccgcgcgagg acgggcgaat cgcctccggc tgggtgaacc tgctcgccgg
     1861 caacgacacc gtctgggcgc cgctcaatgc gggcgcgagg ctctatggcg acacgccgac
     1921 ggtctacttc tgggccggga cggagaactt cgtcggcggc gacgaccgga tcaacggcgg
     1981 gcgcgcgggc gaccagacct tgtcgggcga tttccttctc gtcgggggcc tgggtccttc
     2041 cgtcgtcgac gccaccggcg gcgacgacct cgtcatcacc aacctgttga gcggac
//
LOCUS       DATAIQ010000134         1955 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_422645, whole genome shotgun sequence.
ACCESSION   DATAIQ010000134 DATAIQ010000000
VERSION     DATAIQ010000134.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1955)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1955)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1955
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_422645"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            167..1093
                     /locus_tag="VHN20_02360"
     CDS             167..1093
                     /locus_tag="VHN20_02360"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HEX2724642.1"
                     /translation="MTSDPAHLHPSRSFQGLILTLQRFWAERGCVILQPYDMEVGAGT
                     FHPATTLRALGPRPWRAAYVQPSRRPKDGRYGENPNRLQHYYQFQVILKPSPPDIQDL
                     YLKSLEAIGIDAALHDIRFVEDDWESPTLGAWGLGWECWCDGMEVSQFTYFQQVAGFE
                     CAPASGELTYGLERLAMYVQGVENVYDLNFNGLSGADKVTYGDVFRQAEQEYSRHNFE
                     HADTDMLFRQFRDAEAACRKYLEAGDKGDRHEMALPAYDQAIKASHIFNLLDARGVIS
                     VTERQSYILRVRELAKACGAAWLKTEGGRLAA"
     gene            1093..>1955
                     /locus_tag="VHN20_02365"
     CDS             1093..>1955
                     /locus_tag="VHN20_02365"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012318137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HEX2724643.1"
                     /translation="MPDLLLELFSEEIPARMQRRAAEDLRKLVTDALVERGFLYEGAQ
                     AFATPRRLALQIAGLPAKGQDVREERRGPRVGAPDNAVQGFLKSAGLASLDEARVEKD
                     PKKGEFYVAVIERPGRPTPEVLAEILPAIIRDFPWPKSMRWGARSEKPGSLRWVRPLH
                     AIVCTFGPETEIPDVVPFEVDGIRAADYTYGHRFMAPDLIQVRRFDDYVSSLERARVV
                     LDADRRKDIILTEARNLAFARGLELVEDDALLEEVAGLVEWPVVLTGTFDDAFLDIPP
                     EVIRATIRANQ"
BASE COUNT          317 a          709 c          637 g          292 t
ORIGIN      
        1 aaaccaacgg gtatcctcca gctgaaggga tgccatcccg gccgcgatgc ttgacttgac
       61 aggcctgccc cttaagggtg ccgcaccctc cgccacggac cagcccatga cgcgcgaccg
      121 cgctcagcct cagggtgcgc cccgcccctc ccccgccgcc gctgccatga cgagcgaccc
      181 tgcccatctt cacccgtccc ggtccttcca gggcctgatc ctgacgctgc agcgattctg
      241 ggccgagcgc ggctgcgtca tcctgcagcc ctacgacatg gaggtggggg ccggcacctt
      301 tcacccggcg acgacgttgc gcgccttggg gccgcggccc tggcgcgccg cctatgtgca
      361 gccctcgcgc cggcccaagg acgggcgcta cggcgagaac ccgaaccgcc tgcagcacta
      421 ctaccagttc caggtgatcc tgaagccgag cccgcccgac atccaggacc tttacctgaa
      481 gtccctcgag gcgatcggca tcgacgcggc gctgcacgac atccgcttcg tcgaggacga
      541 ttgggaaagc ccgacgctcg gcgcctgggg cctcggctgg gaatgctggt gcgacggcat
      601 ggaggtgtcg cagttcacct acttccagca ggtcgcgggc ttcgaatgcg cgccggcatc
      661 gggcgagctg acctacgggc tcgagcgcct cgccatgtat gtgcagggcg tcgagaacgt
      721 ctacgacctc aatttcaacg gcctctcggg cgccgacaag gtcacctacg gcgacgtgtt
      781 ccggcaggcc gagcaggaat attcgcggca caatttcgag catgccgaca cggacatgct
      841 gttccggcag ttccgcgacg ccgaggccgc gtgccgcaaa tacctcgagg ccggcgacaa
      901 gggcgaccgc cacgagatgg cgctgccggc ctacgaccag gccatcaagg cgagccacat
      961 cttcaacctg ctcgacgcgc gcggcgtgat ctcggtgacc gagcgccaga gctacatcct
     1021 gcgcgtccgg gagctcgcca aggcctgcgg cgcggcctgg ctcaagaccg agggcgggag
     1081 gctcgcggcc tgatgcccga tctgctgctc gaactttttt ccgaggagat cccggcccgc
     1141 atgcagcggc gcgcggccga agacctgcgc aagctcgtca ccgatgcgct ggtcgagcgc
     1201 ggcttcctct acgagggcgc ccaggccttc gcgacgccgc gccggctggc cttgcagatt
     1261 gcggggctcc ccgccaaggg gcaggacgtg cgcgaggagc ggcgcggccc gcgggtcggg
     1321 gcacccgaca acgccgtcca gggcttcctc aagagcgccg gcctcgcctc gcttgacgag
     1381 gcgcgggtcg agaaagaccc gaaaaagggc gaattctacg tggccgtgat cgagcgcccg
     1441 ggccgcccga cccccgaggt gctcgccgag atcctgccgg ccatcatccg cgactttccg
     1501 tggccgaaat cgatgcgctg gggcgcgcgc tcggaaaagc cgggcagcct gcgctgggtg
     1561 cggccgctgc acgcgatcgt atgcaccttc gggcccgaga ccgagattcc cgatgtggtc
     1621 ccgttcgagg tcgacggcat ccgcgccgcc gactacacct acggccaccg cttcatggcg
     1681 ccggacctga tccaggtgcg ccgcttcgac gactacgtct cgtcgctgga gcgggcccgc
     1741 gtcgtgctcg acgccgaccg gcgcaaggac atcatcctca ccgaagccag gaacctcgca
     1801 tttgcacgcg gtctcgaact cgtcgaggac gacgcgctgc tcgaggaagt cgccggactt
     1861 gtcgagtggc cggtcgtgct gacgggcacc ttcgacgacg cctttctcga catcccgccg
     1921 gaggtgatcc gcgccaccat ccgcgccaac cagaa
//
LOCUS       DATAIQ010000135         1604 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_234180, whole genome shotgun sequence.
ACCESSION   DATAIQ010000135 DATAIQ010000000
VERSION     DATAIQ010000135.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1604)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1604)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1604
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_234180"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(40..573)
                     /locus_tag="VHN20_02370"
     CDS             complement(40..573)
                     /locus_tag="VHN20_02370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002712868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015109 - chromate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015703 - chromate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromate transporter"
                     /protein_id="HEX2724644.1"
                     /translation="MTGREGVFAQLVVQFALLSLLSFGGVNSIVTEIQRVTVENAHWM
                     SDREFATYFAIGQATPGPNILIASLVGWHVAGVPGALIATLGMCGPSAMLVYVVSGAW
                     ERWRHSSWRRIVQQGLIPFSTGLVCASGFVLAQAADHNWATTCITLGTAGFVYFTRFN
                     PLWALGVSALLGLTGLV"
     gene            complement(570..1157)
                     /locus_tag="VHN20_02375"
     CDS             complement(570..1157)
                     /locus_tag="VHN20_02375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013501617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015109 - chromate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015703 - chromate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromate transporter"
                     /protein_id="HEX2724645.1"
                     /translation="MDVQAGPESVATTLDKSEPPGLGEIFVGFLTVGLCGFGGIFYWL
                     RRIVVERRRWLTAEEFAEYYGLCSLSPGPGLINLSVLIGKRFHGAAGGLAAFMGLLCV
                     PVAIALCLAAVYAHFQYLATVRAVLSGVAAAAAGLVIATAAKMLVPLFKPHVRWGLVV
                     AVPVFAAVGIFRLPLLWALAFSAPLGLALAWWKHR"
     gene            1381..>1604
                     /locus_tag="VHN20_02380"
     CDS             1381..>1604
                     /locus_tag="VHN20_02380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724646.1"
                     /translation="MVGFGLGYQPLEPGHAFIGLGEKAAATVLAGAYPLYVKAVHCTH
                     PLATFNAQPPQTIQVPERSLPGALTKAFDDP"
BASE COUNT          311 a          558 c          512 g          223 t
ORIGIN      
        1 cacccgtctg gcgcatcccg ccgacgacaa catcgcgggt catacgagac ctgtcagccc
       61 gagcaaggcg ctcacgccga gcgcccagag cgggttgaac ctcgtgaagt agacgaagcc
      121 cgcggtgccg agcgtgatgc atgtcgtcgc ccagttgtga tccgccgcct gcgccaggac
      181 gaagccgctg gcgcagacca ggcccgtgct gaacgggatc agcccttgct gcacgatgcg
      241 gcgccacgac gagtggcgcc agcgctccca ggcgccggag acgacgtaga ccagcatcgc
      301 cgaaggaccg cacatgccca gcgtcgcgat cagtgcgccg ggaacgccgg ccacgtgcca
      361 cccgaccagg ctcgcgatca ggatattggg gccgggggtg gcctggccga tggcgaaata
      421 ggtcgcgaat tcacggtcgc tcatccagtg cgcgttctcg accgtcacgc gctggatttc
      481 agtgacgatg ctgttgacgc caccgaacga aagcagcgag agcaacgcga actggacgac
      541 aagctgggcg aatacccctt cccgtcccgt catcggtgct tccaccaggc gagcgccagt
      601 ccgaggggcg cgctgaaggc gagcgcccac agcagcggaa gccggaaaat cccgacggcg
      661 gcgaagaccg gcacggcgac gaccagtccc caccgcacat gcggcttgaa cagcggcacc
      721 agcatcttcg cggccgtggc gatcacgagg ccggccgccg ccgcggccac acccgagaga
      781 acggccctga ccgtcgcgag atactggaaa tgcgcgtaga cggcggcgag gcagagcgcg
      841 atcgcgaccg ggacgcacaa cagccccatg aaagcggcaa gcccgcccgc agcgccatgg
      901 aagcgcttcc cgatcagcac cgacaggttg atcaggcccg gcccaggcga gaggctgcac
      961 aagccataat actcggcgaa ttcctccgcg gtgagccagc ggcgccgctc caccactatg
     1021 cgccgcaacc aatagaagat gccgccgaac ccgcacagcc cgaccgtgag gaaaccgacg
     1081 aagatttcgc cgagtccggg cggctcggat ttgtccaatg tggttgcaac cgattcgggg
     1141 ccggcctgaa cgtccacgtc tcgcctccag ttcggagcgc ttgtaaacga tccgtcccgc
     1201 ccgcgagaag ggcatcgtgc gcgcgaccgg agatcgccgc acatttttgg accccggctg
     1261 ggcctggtgt cagaggatgt cggccgcggc ggccccgagg cgcgcctgct gcccggttcg
     1321 cagctgcgcc gccttctcga gcagatttct gtgacgtgcg ctcctggaca attttgcgcg
     1381 gtggtcggct tcggcctcgg ctaccagccg ctcgagccgg gccatgcgtt catcggcctc
     1441 ggcgagaagg cggctgcaac ggtgctcgcg ggggcctacc ccctctatgt caaagcagtc
     1501 cattgcactc accctctcgc aacattcaac gcgcagccgc ctcaaacgat ccaagtgcct
     1561 gagcgaagcc tgccgggagc tttaacaaaa gccttcgacg atcc
//
LOCUS       DATAIQ010000136         3384 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_376771, whole genome shotgun sequence.
ACCESSION   DATAIQ010000136 DATAIQ010000000
VERSION     DATAIQ010000136.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3384)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3384)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3384
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_376771"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..668
                     /locus_tag="VHN20_02385"
     CDS             <1..668
                     /locus_tag="VHN20_02385"
                     /inference="COORDINATES: protein motif:HMM:NF014010.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PhoU domain-containing protein"
                     /protein_id="HEX2724647.1"
                     /translation="HVATMLHSSLAAIEGDDLRLVKDVERADNVVDRLHEAIKLYLVK
                     ASKAEMSDDESRRFIEILTFTTNLEHIGDIIDKNLMELAAKKIRKQLSFSPEGLDELR
                     AFHGRIAETMRAAFNVFATRDVSLARRLYADKASTRLFERDAAESHFARLKDGRPESL
                     ETSAIHLDILRDLKRIHGHLTAVVYPILEAEGELADTRLKARAERTVADASLINLAPS
                     PGQ"
     gene            complement(1026..2354)
                     /locus_tag="VHN20_02390"
     CDS             complement(1026..2354)
                     /locus_tag="VHN20_02390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HEX2724648.1"
                     /translation="MKSTNRALALAAVSILALAAASSVAQAGAFGLREQSATLQGMSF
                     AGAASGAGGVSSTYWNPATITMKPGWNSEYHVSVVVPEAKIDPGPGTSPFLASPPFSG
                     NFLPSGDIGETGVIPSSYSSYQISDSVWFGIASTAPYGLVTKPEPVWAGQIYARTSKV
                     FSLNVNPILGWKVTDWLSIAAGPAVQYFDVRLERATAPGAAASTLTLEGDDVGIGATA
                     GVNLTLPSQTNIGVGFRSSIHHDLEGKVRVPGTTLIPIEASLNTPEMVTVGISQAFTP
                     YFRVHAGFEWTNWSRLKTPTVTGPGGRTVTALVLNYDDGYFYSLGAEYDFSDRWTFRA
                     GVAYEDSPINDANRTPVIPDNDRIWASVGATYKWSEKLSFDVSYTHIFVDDTKIDIRE
                     GREQLLRAGPVGLPLIADVNDANVNIISAAVKYRWDDPKVAVPAAVVRKY"
     gene            2606..>3384
                     /locus_tag="VHN20_02395"
     CDS             2606..>3384
                     /locus_tag="VHN20_02395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015932445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEX2724649.1"
                     /translation="MKLVRFGPAGQEKPGLVDGDGRIRDLSGHVADISGQTLGAQALA
                     RLRGIDPKSLPVAPDGARIGPCVAGVGNFIAVGLNYVDHANETGSPIPAEPILFNKAP
                     SCIVGPNDDTVQPKGSRKLDWEVELAIVIGERASYVHANNALDYVAGYCICNDVSERE
                     FQIERGGQWMKGKSCPTFGPIGPWLVTRDDIADVQNLSMWLDVNGERRQTGSTKTMIF
                     DCAQVVSYTSHFMTLEPGDVITTGTPPGVGLGMKPPRYLQPG"
BASE COUNT          585 a         1136 c         1118 g          545 t
ORIGIN      
        1 accacgtcgc caccatgctg cacagctcgc tcgccgccat cgagggcgac gacctgaggc
       61 tggtcaagga cgtggagcgc gccgataacg tcgtcgaccg cctgcacgag gccatcaagc
      121 tctacttggt caaggcgtcg aaggcggaga tgtccgacga cgaaagccgc cgcttcatcg
      181 agatcctgac cttcacgacc aacctcgagc atatcggcga catcatcgac aagaacctga
      241 tggagctcgc ggccaagaag atccgcaagc agctgtcgtt ctcgccggag gggctggacg
      301 agctgcgcgc cttccacggg cgcattgccg agaccatgcg cgccgcgttc aacgtgttcg
      361 cgacgcgcga cgtcagcctc gcccggcggc tctatgccga caaggcgtcg acccgcctgt
      421 tcgagcgcga tgccgccgag agccatttcg cgcgcctcaa ggacggccgg ccggaatcgc
      481 tcgagaccag cgccatccac ctcgacatcc tgcgcgacct caagcgcatc cacggccacc
      541 tcacggccgt cgtctatccg atcctcgaag ccgagggcga gctcgccgac acgcgcctca
      601 aggcgcgtgc cgagcgcacc gtcgccgacg cctccctgat caacctcgcc ccgagcccgg
      661 gccagtagcg ccaatccgtc cccgcccggc ggatctcggg tgtttccgag atccatgtcg
      721 aagcgtgcga aagtcgggaa cacccggctt gcgatgggag aaggtgtccg cccgcgggtc
      781 ttgccttagg caagcgcggg gacaggctcc gcggccggat gaggcgtgtg cgctacccag
      841 atagggcagt ctcctcgccc ggtgcgctga actcgggcct gcccgagttc agtcgatttg
      901 tgcgcaagtc ggaaacaccc gacttgcgtg gcgcacacga cgtcttccct ccgaaagagg
      961 tgtcccaaag tggaaaggcc ggcgtttcgc cggcctttcg cttcccccac cctttttatt
     1021 caggctcagt atttgcggac gaccgccgcc ggcacggcga ccttggggtc gtcccagcga
     1081 tacttcaccg ccgccgagat gatgttgacg ttggcgtcgt tgacgtcggc gatcagaggc
     1141 aggccgaccg ggccggccct gaggagctgc tcgcgtccct cgcggatgtc gatcttggtg
     1201 tcgtcgacga agatgtgcgt gtaggagacg tcgaaggaga gcttctcgct ccacttgtag
     1261 gtcgcgccga ccgacgccca gatgcggtcg ttgtcgggaa tgaccggcgt gcggttggcg
     1321 tcgttgatcg gcgagtcctc gtaggcgacg ccggcgcgga aggtccagcg gtcggagaag
     1381 tcgtattcgg cgccgagcga atagaagtag ccgtcgtcgt agttcaggac gagggccgtc
     1441 acggtgcgcc cgccggggcc ggtgacggtc ggcgtcttga ggcggctcca gttggtccac
     1501 tcgaagccgg catggacccg gaaatacggc gtgaacgcct gcgagatgcc gaccgtgacc
     1561 atctcgggcg tgttgaggct cgcctcgatc gggatgagcg tggtgcccgg aacccggacc
     1621 ttgccctcga gatcgtggtg gatcgaggag cggaagccaa cgccgatatt ggtctgcgac
     1681 ggcagcgtga ggttgacgcc ggccgtggcg ccgatgccga cgtcgtcgcc ctcgagggtc
     1741 agcgtcgacg cggcggcgcc gggcgcggtg gcgcgctcga gccgcacgtc gaaatactgc
     1801 acggccggac ccgctgcgat cgacagccag tcggtaacct tccagccgag aatcgggttc
     1861 acgttcagcg agaagacctt cgaggtgcgg gcatagatct ggccggccca cacgggctcg
     1921 ggcttcgtca cgaggccgta cggggccgtc gaggcgatgc cgaaccacac gctgtcgctg
     1981 atctgatagc tgctgtagct ggacggaatg acgccggtct cgccgatgtc gcccgaaggc
     2041 aggaagttgc ccgagaaggg cgggctggcg aggaacggcg aggttcccgg gcccgggtcg
     2101 atcttcgctt ccgggacaac caccgagacg tgatactcgc tgttccagcc cggcttcatg
     2161 gtgatcgtgg ccgggttcca gtaggtcgag gagaccccgc ctgcgccgga agcggcgccg
     2221 gcgaaggaca tgccttgaag ggtcgcgctc tgctcgcgca gcccgaaggc gccggcctgg
     2281 gccaccgagc tcgcggccgc cagagcgagg atcgacacgg ctgccaatgc gagcgcgcgg
     2341 ttcgtggatt tcatcaccat tctgccccgg aaatcagccc atgcgggcgc aaaccctgca
     2401 cccttcccaa gcactttgcc ggtgccgacg attcgccgca atcgcaagcg ctgccgttgc
     2461 ggcgattccg cggaactcgt gacaaaacgg caacaaacat ttggtggcat tcgcaaaccc
     2521 ttgccaggcc gcagcaagcg cttgccgcgg ctcgccttcc cggccacatt cggccgtcgt
     2581 tcacgctgca aggatctctc gtccgatgaa actcgtgcgc tttggccccg ccggccagga
     2641 aaagccaggc ctcgtcgatg gtgacgggcg catccgcgac ctgtccggcc atgtggccga
     2701 catctccggc cagaccctcg gcgcacaggc gctcgccagg ctgcgcggca tcgatcccaa
     2761 gtccctgcct gtggcgccgg acggggcgcg gatcggcccg tgcgtggccg gggtcggcaa
     2821 cttcatcgcc gtcgggctga actacgtgga ccatgccaac gagaccggct cgccgatccc
     2881 ggcggagccg atcctgttca acaaggcgcc ctcgtgcatc gtcgggccga atgacgacac
     2941 ggtgcagccg aaaggctcca ggaagttgga ttgggaggtc gagctcgcca tcgtcatcgg
     3001 cgagcgcgcc agctacgtgc acgccaacaa cgcgctcgac tacgtcgccg gctactgcat
     3061 ctgcaacgac gtctccgagc gcgaattcca gatcgagcgc ggcggccaat ggatgaaagg
     3121 caagagctgc ccgactttcg gtccgatcgg cccctggctg gtcacccggg acgacatcgc
     3181 cgacgtccag aacctgtcca tgtggctcga cgtcaacggc gaacgccggc agaccggctc
     3241 gaccaagaca atgatcttcg actgcgcgca ggtggtctcg tacacgtcgc atttcatgac
     3301 cctggagccc ggcgacgtca tcacgacggg caccccaccc ggcgtcgggt tgggcatgaa
     3361 gccgccgcgc tacctgcagc ccgg
//
LOCUS       DATAIQ010000137         1712 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_376857, whole genome shotgun sequence.
ACCESSION   DATAIQ010000137 DATAIQ010000000
VERSION     DATAIQ010000137.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1712)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1712)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1712
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_376857"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..303)
                     /locus_tag="VHN20_02400"
     CDS             complement(<1..303)
                     /locus_tag="VHN20_02400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018245837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine ABC transporter
                     substrate-binding protein"
                     /protein_id="HEX2724650.1"
                     /translation="MAVLAGAGIAQAQTLKVGSKNFTEQFIVAELYAGALEAAGFKVE
                     RKINLGATLIAHEAVRTGAIDIYPEYTGTGLLAVMKAQPPIETDPQKVHDLVKRHYE"
     gene            513..779
                     /locus_tag="VHN20_02405"
     CDS             513..779
                     /locus_tag="VHN20_02405"
                     /inference="COORDINATES: protein motif:HMM:NF022603.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2934 domain-containing protein"
                     /protein_id="HEX2724651.1"
                     /translation="MHNVQHDKVRERAYQIWEREGRQDGRAEEHWSQAEQELAAPRES
                     AASDIVVRQAAAAAPTVNGSAKTAKSSAPRKRRGAQAKALEQTP"
     gene            complement(970..>1712)
                     /locus_tag="VHN20_02410"
     CDS             complement(970..>1712)
                     /locus_tag="VHN20_02410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018181147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008184 - glycogen phosphorylase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycogen/starch/alpha-glucan phosphorylase"
                     /protein_id="HEX2724652.1"
                     /translation="AIKAEPERAWAPRVKIFAGKAAASYRQAKLIIKLANDVARLVNN
                     DPVVRDRLKVVFLPNYNVSLAEAIIPAADLSEQISTAGMEASGTGNMKLALNGALTIG
                     TLDGANIEICERVGHENMFIFGLTAEEVEARWRSGSHAPITIASSPRLARALEDVAAG
                     VFSPDEPQRFAPLVEELSHRDRFMVTADFDAYWEAQRAVDRRWRDRKAWWHASVLNTA
                     HVAWFSSDRTIREYADDVWNVTVPEPAP"
BASE COUNT          288 a          543 c          594 g          287 t
ORIGIN      
        1 ctcgtaatgc cgcttgacca agtcatggac cttctgggga tccgtctcga tcggcggctg
       61 cgccttcatc actgcgagaa gaccggtgcc cgtatattcc gggtagatgt cgatcgcgcc
      121 ggtgcggacc gcctcgtgag cgatcaacgt ggcgccgaga ttgatcttgc gttcgacctt
      181 gaagcccgcc gcttcgaggg cgccggcgta aagctcggcg acgatgaatt gctcggtgaa
      241 attcttcgac ccgaccttga gggtctgggc ctgcgcgatg ccggcaccgg cgagaaccgc
      301 catggccgca gctgcaatga atcgccagaa ccgtgccatc gcaatctcct gaaacattaa
      361 ctacgtcccg gaccgtaacg gcattggtcg ggacgtgcca agcccggtgc gctgcagcga
      421 cgcatggaac cttggccgtg gggcctttga ccttcctcga tcggccggga aatgatagcc
      481 ggcgactcac gagagattcg gtgaggtggc agatgcacaa cgtacaacac gacaaggttc
      541 gcgagcgcgc ttaccagatc tgggagcgtg aggggcgcca ggacgggcgt gccgaggagc
      601 actggtcgca ggcggagcag gagcttgccg cacctaggga aagtgccgca tcggacatcg
      661 tcgtccggca ggcggcggct gcggcgccca ccgtcaacgg aagcgcgaag acggcgaagt
      721 cgagcgctcc gcgcaagcgc cgcggcgcac aggcgaaggc cttggagcaa actccctgac
      781 cctgagcggg gagggttgcg agggctgttt tcgcgccgcg agcggctccc gtgccctccg
      841 agacgattgt tgcgccgcac gcgcgcaact tacccacaag agggttttcc tgtgtcgtcg
      901 ggaagccgga ccggccgaac acggacggtg cggcaactgc gccggtatgg tcgctgagga
      961 cgcggaggcc tacggggcgg gctcagggac cgtgacgttc cagacgtcgt cggcgtattc
     1021 gcggatcgtc cggtccgatg agaaccacgc cacgtgggcg gtgttgagca cgctcgcatg
     1081 ccaccatgcc ttgcggtcgc gccagcgccg gtcgacagcc cgctgggctt cccaataggc
     1141 gtcgaaatcg gccgtcacca tgaagcggtc gcggtggctg agctcctcga ccaggggcgc
     1201 gaagcgctgc ggctcgtcgg gggagaagac gcccgcggcg acgtcctcca gggcccgggc
     1261 cagccgtggc gacgaggcaa tcgtgatcgg ggcgtggctg cccgagcgcc agcgcgcctc
     1321 cacctcttcg gcggtcagac cgaagatgaa catgttctcg tgcccgacgc gttcgcagat
     1381 ctcgatattg gcgccgtcga gcgtgccgat ggtgagcgcg ccgttgaggg cgagcttcat
     1441 gttgcccgtg cccgacgcct ccatgccggc ggtcgagatc tgctccgaca gatccgccgc
     1501 cgggatgatc gcctcggcaa ggctgacgtt gtagttgggc aggaagacga ccttgaggcg
     1561 gtcgcgcacg acggggtcgt tgttgaccag ccgggccacg tcgttggcga gcttgatgat
     1621 cagcttggcc tgccggtagc tcgccgccgc cttgccggca aaaattttca cccgcggcgc
     1681 ccatgcccgt tccggctccg ccttgatcgc gt
//
LOCUS       DATAIQ010000138         3443 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_234371, whole genome shotgun sequence.
ACCESSION   DATAIQ010000138 DATAIQ010000000
VERSION     DATAIQ010000138.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3443)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3443)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3443
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_234371"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(254..565)
                     /locus_tag="VHN20_02415"
     CDS             complement(254..565)
                     /locus_tag="VHN20_02415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012564203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyhydroxyalkanoic acid system family protein"
                     /protein_id="HEX2724653.1"
                     /translation="MSKPVVVSIPHQLGKEEAQRRLQGGVGRLRAQFGDKLGTIEDTW
                     TGDHADFRLSVLGQGVSGSLDVMEDHVRVEVQLPWMLAMVAEKAKGLIQKQGTLMLEK
                     K"
     gene            complement(710..1279)
                     /gene="efp"
                     /locus_tag="VHN20_02420"
     CDS             complement(710..1279)
                     /gene="efp"
                     /locus_tag="VHN20_02420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010968469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HEX2724654.1"
                     /translation="MVKVIASSVRKGNILEVDGQLYVVLSAESFFPGKGTPTTQIDMR
                     RLSDGVKTSQRYKTTEQVERAYVEDREHTYLYQDGQDYIFMNPESYDQITVPKDVLGD
                     QAPYLQEGMACKLSVYEGAAVAIELPQRVVLEVVETEPTVKGQTASSSYKPATLSNGL
                     RTMVPPHISTGTRIVIMTGDGSYVERAKD"
     gene            1414..2475
                     /gene="epmA"
                     /locus_tag="VHN20_02425"
     CDS             1414..2475
                     /gene="epmA"
                     /locus_tag="VHN20_02425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018013246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004824 - lysine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006430 - lysyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EF-P lysine aminoacylase EpmA"
                     /protein_id="HEX2724655.1"
                     /translation="MVAASPWWHSHVHADRRPFLLARGRIVAALRRFFEAGDFVEVET
                     PALQVSPGNEAHLHAFATELLGPDGRRAPLYLHTSPEFACKKLLAAGEQRVFTFARVF
                     RNRERGPLHHPEFTLLEWYRARQPYEALMTDCAELLAAAAETAGTKVLSWRGTTLDPL
                     AAPERLTVAEAFRRYAGIDLVGTVDQAGETDRDALAERARRAGIRVAEDDRWSDVFSR
                     ILVERIEPRLGHGRATILHEYPLAEAALARPTAHDARTAERFELYACGVELANAFGEL
                     TDPAEQRRRFAGEMAEKERVYGDRYPVDEDFLAALGAMPQASGIALGLDRLVMLALGA
                     TRIEQVLWAPVPDIMEVPE"
     gene            2472..>3443
                     /locus_tag="VHN20_02430"
     CDS             2472..>3443
                     /locus_tag="VHN20_02430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008961586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysine-2,3-aminomutase-like protein"
                     /protein_id="HEX2724656.1"
                     /translation="MTAVPKTLRTAAELLDAGLIAPDQLTGLERVAARYAVAITPAVA
                     DLIDPDDPADPMAMQFVPHPAELVTQVHETGDPIGDGAHNPVEGVVHRYPDRVLLKLV
                     HVCPVYCRFCFRREMVGPGRGTTLSRAALAAALDYIRSRPEIWEVVLTGGDPMILSPR
                     RVREVVAALSDIDHVRVLRWHTRVPVVAPERVTRGLVRALRAAGKASYVVLHANHARE
                     LTPQARAACARLIDAGIPMLSQSVLLKGVNDDPDTLGSLMRAFVETRIKPYYLHHGDL
                     APGTARFRTSIAEGQSLMRALRGRLSGLCQPAYMLDIPGGHGKSPIGP"
BASE COUNT          526 a         1221 c         1127 g          569 t
ORIGIN      
        1 gacggcgacg aagcccttga actccttggt caggccttcc gtcgcgagaa tgatgtcgcc
       61 gaccatgaac tccccatgac acgcttatcg ggccgctcag cgagaagcgg gatcactcga
      121 gatcgaattg atccgcgctc cagactttcc ggccgcgcgg tcgaaccagg cggcgccact
      181 ttgcccgacc acgcgcgagg gatgctgcac ggcagcaaca caggtgtcaa cgccgcgggg
      241 agactacttt cggctacttc ttctcgagca tcagcgtgcc ctgtttctgg atgaggccct
      301 tcgccttctc ggcgaccatg gccagcatcc agggcagctg aacctcgacc cggacgtgat
      361 cttccatgac gtcgaggctc ccactcacgc cctggccgag aacgctcagg cggaaatcgg
      421 catggtcgcc ggtccaggta tcctcgatgg tgccgagctt gtcgccgaac tgcgcgcgca
      481 accggcccac gccgccctgc agccggcgct gcgcttcttc cttgccgagt tgatggggaa
      541 tcgagacgac aaccggtttg gacatggcca tgctcctccg tcagacccta acgcgggagc
      601 ccatggggcc agttcccggc gacgtccggg tgccgcatga cccggatcaa gaccgggacg
      661 gccgcggaca acggccagcc tctcaggggc cggtcttccg gatcagacct cagtccttgg
      721 cgcgttcgac gtaagagccg tcgcccgtca tgatcacgat ccgggtgccg gtcgagatat
      781 ggggaggcac catggtgcgc aggccgttcg acagggtggc gggcttgtag gacgacgacg
      841 ccgtctggcc tttgacggtc ggctccgtct cgacgacctc cagaacgacg cgttgcggga
      901 gctcgatggc gaccgccgcg ccctcgtaaa cggaaagctt gcaggccatg ccttcctgca
      961 gatagggcgc ctggtcgccg agcacgtcct tcgggaccgt gatctgatcg taactctccg
     1021 gattcatgaa gatgtaatcc tggccatcct ggtagagata ggtgtgctcg cgatcctcga
     1081 cataggcgcg ctccacctgc tccgtggtct tgtagcgctg gctcgtcttc accccgtcgg
     1141 acagccgccg catatcgatc tgggttgtcg gcgtgccctt gcccgggaag aagctttcgg
     1201 ccgacagcac gacgtaaagc tggccatcga cttcgaggat atttcccttg cgcacggagc
     1261 tggcgatgac cttcacgatc ttacgtcctc tggttgttgc ggcgcggccg tggcgatcgg
     1321 gctcttgcgc cgcccccggc tacatcttag ggccgcacct agccgatctt gacgcggacc
     1381 gccagccctt ccggtccctg gagacaaagc tcgatggtcg ctgcctctcc ctggtggcat
     1441 tcgcacgtgc atgccgaccg ccggccgttc ctgctggccc gcgggcgcat cgttgcggcc
     1501 ctgcgccggt ttttcgaagc cggcgatttc gtcgaggtgg agacccccgc cctgcaggtt
     1561 tcgccgggca acgaggcgca tctgcacgca ttcgcgaccg aactgctcgg tcctgacggg
     1621 cgtcgggcgc cgctctatct ccacacctcg ccggaattcg cctgcaagaa gctgcttgcc
     1681 gccggcgagc agcgggtctt caccttcgcg cgcgtgttcc gcaaccgcga gcgcgggccg
     1741 ctgcaccatc cggagttcac gctgctcgaa tggtaccggg cccggcagcc atacgaggcg
     1801 ctgatgaccg attgcgccga gctgctcgcg gcggccgccg aaacggccgg cacgaaggtg
     1861 ctgtcatggc gaggcacgac cctcgacccg ttggcggcgc ccgaacgcct gaccgtcgcg
     1921 gaagcgttcc ggcgctatgc cggcatcgac ctcgtcggca ccgtcgatca ggcaggcgag
     1981 accgaccggg acgccctcgc ggagcgggcc cgccgcgccg gcatccgcgt cgccgaggac
     2041 gaccgctgga gcgacgtgtt cagccgcatc ctggtcgagc gcatcgagcc gcgcctgggg
     2101 cacggacgcg ccaccatcct gcacgaatac ccgctcgcgg aagcggcgct ggcgcgccca
     2161 accgcccacg atgccaggac cgccgagcgg ttcgagctct acgcatgcgg ggtcgagctg
     2221 gccaacgcct tcggcgagct gaccgacccg gccgagcagc gccgccgctt cgccggcgaa
     2281 atggccgaga aggagcgtgt ctacggcgac cgctaccccg tcgacgagga tttcctggcg
     2341 gccctcggcg ccatgccgca ggccagcggc atcgccctcg gcctcgatcg gctcgtcatg
     2401 ctggcgctcg gcgccacgcg catcgagcag gttctgtggg cgccggtgcc cgacatcatg
     2461 gaggtccctg aatgaccgcc gtcccgaaaa cgctgcgcac ggcggcagag ctgctcgatg
     2521 ccgggctcat cgcgccggac cagctcaccg gcctcgagcg ggtcgcggcg cgatacgcgg
     2581 tggcgatcac gccggcggtc gccgatctga tcgacccgga cgatccggcc gacccgatgg
     2641 cgatgcaatt cgtgccgcac ccggccgagc tcgtcacgca ggtgcacgag acgggcgacc
     2701 cgatcggaga cggagcgcat aatcccgtag aaggcgtcgt gcaccgctat cccgaccgcg
     2761 tgctgctcaa gctggtccat gtctgcccgg tctattgccg gttctgcttc cggcgcgaga
     2821 tggtcggccc cggtcgcggc accacgctct cgcgggcggc cctggccgca gcgctcgact
     2881 acatccgcag ccggcccgag atctgggaag tcgtgctcac cggcggcgat ccgatgatcc
     2941 tctcgccgcg ccgcgtgcgc gaggtcgtgg cagctttgtc ggacatcgac cacgtcaggg
     3001 tgctgcgctg gcacacgcgc gtcccggtgg tcgcgcccga gcgggtcacg cggggcctcg
     3061 tgcgcgcctt acgggcggcc gggaaggcaa gctacgtggt gcttcacgcc aaccatgccc
     3121 gggagctcac gccgcaagca cgcgccgcct gtgcgcgcct gatcgatgcg ggcattccga
     3181 tgctgagcca gtccgtcctc ctgaaaggcg tcaacgacga tcccgatacg ctgggcagcc
     3241 tgatgcgcgc cttcgtcgag acgcggatca agccctatta cctgcaccac ggcgacttgg
     3301 cgcccggcac ggcccgcttc cgcacgtcca tcgcggaggg ccagagcctg atgcgtgccc
     3361 tgcgcgggcg cctctcgggc ctgtgccagc ctgcctacat gctcgacatt ccgggcgggc
     3421 acggcaagtc gccgatcggg ccc
//
LOCUS       DATAIQ010000139         1841 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_376995, whole genome shotgun sequence.
ACCESSION   DATAIQ010000139 DATAIQ010000000
VERSION     DATAIQ010000139.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1841)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1841)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1841
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_376995"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..645
                     /locus_tag="VHN20_02435"
     CDS             <1..645
                     /locus_tag="VHN20_02435"
                     /inference="COORDINATES: protein motif:HMM:NF025581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4329 domain-containing protein"
                     /protein_id="HEX2724657.1"
                     /translation="HPSLMSGDAAARSPVETANGQTPAGSSGDTIAHLIVDLIKRQKE
                     LIERLYPQTPQGPGGVPGTTPRPPKRGPYPTPEAAARAALREANPRSVAENREYAGLI
                     YRGADGQYYYTGPVAGTPTSSRPNDAPAPAGSTVVGDYHTHGDYSTTDPATGQSIPTD
                     NPAEDQYNSDHFSGTDKKAIGESAADNPGYKGYLGTPSGGFKQYDPATGKETAL"
     gene            659..1150
                     /locus_tag="VHN20_02440"
     CDS             659..1150
                     /locus_tag="VHN20_02440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724658.1"
                     /translation="MTFRVLDEIQGTGLGAMREAIWLLRKHRLDVAQSRVEVIEDGGS
                     HVVIFTMKDGARFGARAGSRTELPAKELERLSKAAPRRLHHVQGSSLAAADIAVRELE
                     QRNLRLDGYKVDVVRDGDAIAVLFVDKDQERGVLGSAGRNPGFEVYLRASDLSLVRSN
                     FVR"
     gene            complement(1258..>1841)
                     /locus_tag="VHN20_02445"
     CDS             complement(1258..>1841)
                     /locus_tag="VHN20_02445"
                     /inference="COORDINATES: protein motif:HMM:NF017088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042314 - bacteriochlorophyll binding
                     [Evidence IEA];
                     GO_process: GO:0019684 - photosynthesis, light reaction
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="PRC-barrel domain-containing protein"
                     /protein_id="HEX2724659.1"
                     /translation="PRVQDVPPVRAQAGASPPAAPSTPPPATAQADKPVPQGSPQSAE
                     ARVGANRDQGEAKEAVESRSPPAAASTAKPAVVAAVAPAPGKHAFAVSRLKRMNLYND
                     RGDKLGDVERVLQSQDGSFHIVIGAGGFLGIRERDVRIPLERVTVRGDRLTIQGLTED
                     EVKAMPVFDSKDRTYRDLARNNLVPVARDPSEK"
BASE COUNT          295 a          631 c          615 g          300 t
ORIGIN      
        1 catcccagcc tgatgagcgg cgacgcggcc gcccgttcgc cggtcgaaac agccaacggc
       61 caaactcccg cgggctcctc gggagatacg atcgcgcatc tgatcgtcga tctcatcaag
      121 cggcaaaagg agctgatcga acggctctat ccgcagacgc cgcaggggcc cggcggggtt
      181 ccgggcacca ccccgagacc gcccaagcgc ggcccctatc cgacgcccga ggctgccgcg
      241 cgcgcggcgt tgcgcgaggc caacccccgc tcggtcgccg agaaccgcga atatgcaggc
      301 ctgatctatc gcggcgccga cgggcaatat tactacaccg gtcccgtcgc cggcacgccg
      361 acgtcgtctc gccccaatga cgccccggcg ccggcgggat cgaccgtcgt gggcgactat
      421 catacgcacg gcgactattc gacgacggat ccggccaccg gccagtcgat cccgaccgac
      481 aatccggccg aggaccagta caacagcgat catttctccg gaacggacaa gaaggcgatc
      541 ggcgagagcg ccgccgacaa tccgggttac aagggctacc tcggcacgcc gagcggcggc
      601 ttcaagcaat acgatccggc gaccggcaag gagacggccc tgtgaaggtt ctccgatcat
      661 gacattccgg gtgctcgacg aaattcaagg cacaggcctc ggcgccatgc gggaagcgat
      721 ctggcttctc cgcaagcatc gcctcgacgt cgcgcagtcc cgcgtcgagg tgatcgagga
      781 tggcgggtct cacgtcgtca tcttcaccat gaaggatggg gcgcgtttcg gggcgcgcgc
      841 gggcagcagg accgaactgc ccgccaaaga gctggaacgc ctgtcgaagg ctgcgcctcg
      901 acggttgcac cacgtgcaag gttcgagcct cgcggcagcc gacatcgccg tgcgcgagct
      961 cgagcagcgc aatctgcgcc tcgacggcta caaagtggac gtcgtccgcg atggcgatgc
     1021 catcgccgtg ctgttcgtcg acaaggacca ggagcgcggc gttttgggca gcgccggtcg
     1081 caacccgggc ttcgaggttt atctcagggc ctcggatctg agcctggtca ggtcaaactt
     1141 cgtccggtaa tcgccatcgc cgccatcgcc gatgtccgca attcgcgacg cgccgatttc
     1201 aggtcctcga ccgacgccgc catcggaccg ggtttcttcg ttgtcgttgg tccgaggtta
     1261 cttctcggat ggatcccggg cgaccggcac caggttgtta cgcgcgaggt cgcggtaggt
     1321 tcgatccttg ctgtcgaaga ccggcatggc cttcacctcg tcctcggtca ggccctggat
     1381 cgtcagcctg tcgccgcgca cggtcacccg ttcgagcggg atgcgcacgt cgcgctcgcg
     1441 gatgccgagg aagccgcccg cgccgatcac gatgtggaag ctgccgtcct ggctctgcaa
     1501 cacccgctcg acgtcgccga gcttgtcgcc gcgatcgttg tagaggttca tcctcttcaa
     1561 gcgagagacc gcgaatgcgt gcttgcccgg cgcgggtgcg acggcggcca cgacggctgg
     1621 cttcgcggtc gacgccgctg ccggcgggct tcggctctcg actgcttcct tggcctcgcc
     1681 ctggtcgcgg ttcgctccga cgcgggcctc ggcggattgg gggctgcctt gcgggacggg
     1741 cttgtcggct tgcgctgttg ccggcggcgg cgtcgacgga gccgccgggg gactggcgcc
     1801 ggcctgtgcg cgaaccggag ggacgtcctg aacgcgcggc c
//
LOCUS       DATAIQ010000140         2762 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_377082, whole genome shotgun sequence.
ACCESSION   DATAIQ010000140 DATAIQ010000000
VERSION     DATAIQ010000140.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2762)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2762)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2762
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_377082"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..917
                     /locus_tag="VHN20_02450"
     CDS             <1..917
                     /locus_tag="VHN20_02450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020493646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX2724660.1"
                     /translation="PRVESDLGFRVAGKVARRLVSAGDLVKAGQALASLDDADLRLQR
                     EQAEAEIRAADASLAQAEAELGRIATLRKQDWSTVTGYDRQKAATEEARGRLVRAERA
                     LALAQNALSYAVLKADADGVVTATQIEPGQVVAAGQPAVRLARTGEKEAVVAVPEALV
                     EQLRGGTASVSLWADAGTRYAAHLRELSPSADPVTRTYQARYALPGAGDDVQLGMTAV
                     VTMGAPNGARVARLPLSALYNQGSGPGVWVVNDDGVLALKPVTIAALEARDVLIAAGV
                     NDGEQVVSLGVQKLDAGQKVRIVQALQF"
     gene            977..>2762
                     /locus_tag="VHN20_02455"
     CDS             977..>2762
                     /locus_tag="VHN20_02455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018260769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX2724661.1"
                     /translation="MKRFNLSDWAVHHQALVLFLILAIAAGGALSFARLGRSEDPNFT
                     IKVAIVTAIWPGATAREMQEQVADRIEKKLQELPWFDKVQTYTKPSFTAMQVVFRDNT
                     PARDMPQLFYQLRKKLGDIRNELPQGLIGPNVNDEYGDVDSILYMLSGEGTDYAQLKT
                     VAEGLRQRLLKVPSVVKVNLYGVQDEKIFVEFSHAKLATLGVPAQALFDSLQKQNAVV
                     PAGVVETSAQRVSLRVSGALDGAKAVAETPVEANGRTFRLGDIATVTRGFEDPSDYLV
                     RQRGKPALGLGVVMAKGANILAFGKDVGAATAEFMAAVPRGVDIEQVADQPVVVDHAI
                     GEFQRSFLEALAIVLAVSFVSLGWRTGIVVALSVPLVLAITFVAMGVLGIDLHRISLG
                     ALIISLGLLVDDAIIAVEMMMVKIEQGWDRMRAAAFAWTSTAFPMLTGTLVTAAGFLP
                     VGFANSAVGEYAGGIFWVVAIALIASWFVAVIFTPYIGVKLLPARLSKHAQADPHAIY
                     ETRSYNILRRIVALCVRRRGLTVALTLAAFAASIVGFGQVQQQFFPLSERPELFFQMR
                     LPEGTAIGVTADSARQAERILGNDPDIAT"
BASE COUNT          411 a          964 c          939 g          448 t
ORIGIN      
        1 agccgcgcgt cgagagcgat ctcggcttcc gcgtcgccgg aaaggtggcg cgccgcctgg
       61 tttccgccgg cgacctcgtc aaggccggac aggcgctcgc cagcctcgac gacgccgatc
      121 tcaggctcca gcgcgaacag gcggaagccg agattcgcgc tgcggatgcc tcgctggcgc
      181 aggcggaagc cgaactcggc cgcatcgcga cgttgcgcaa gcaagactgg tcgaccgtga
      241 ccggctacga ccggcagaag gccgccaccg aagaggcgcg cggccggctg gtgcgcgccg
      301 agcgcgccct cgctctcgcc cagaacgcgc tgtcttatgc cgtgctgaag gccgacgccg
      361 acggcgtcgt caccgccacc cagatcgagc ccggccaggt cgtcgccgcc ggccagccgg
      421 ccgtcaggct cgcccgcacc ggcgagaagg aagcggtggt ggcggtgccc gaggctctcg
      481 tcgagcagct gcgcggcggc acggcgagcg tgagtctgtg ggccgacgcc ggcacgcgtt
      541 atgcagcgca cttgcgcgag ctgtcgccgt ctgcggatcc tgtcacccgc acctaccagg
      601 cgcgttacgc gcttcccggc gccggcgacg acgttcagct cggcatgacg gcggtggtca
      661 cgatgggcgc cccgaacggc gcccgcgtcg cgcgcctgcc gctgtcggcg ctctacaatc
      721 agggcagcgg gccgggggtg tgggtggtga acgacgacgg cgtgctcgcg ctgaagccgg
      781 tcacgatcgc cgcgctcgaa gcgcgcgacg tgctgatcgc cgcgggcgtc aacgacggcg
      841 aacaggtcgt ctcgctcggc gtgcagaagc tcgatgccgg ccagaaggtc cgcatcgtcc
      901 aggccctgca gttctgaacc atcatccggc gcgcgcgtcg ccggcggcaa ccatgcgggg
      961 cgaacgaggt tcggccatga agcgcttcaa cctgtccgac tgggccgtcc accaccaggc
     1021 cctggtgctg ttcctgatcc tggcgatcgc cgcgggcggc gccttgtcgt tcgcgcggct
     1081 tggccgctcc gaggacccga acttcaccat caaggtggcg atcgtcaccg cgatctggcc
     1141 tggcgcgacg gcgcgcgaga tgcaggagca ggtcgccgac cgcatcgaga agaagctgca
     1201 ggagctgccc tggttcgaca aggtgcagac ctacacgaag ccgtccttca cggccatgca
     1261 ggtggtcttc cgcgacaaca cgccagcccg cgacatgccg cagctgttct atcagctgcg
     1321 caagaagctc ggcgacattc gcaacgagct gccgcaggga ctgatcggtc ccaacgtcaa
     1381 cgacgaatac ggcgacgtcg attcgatcct ctacatgttg agcggcgagg gcaccgacta
     1441 cgcccagctc aagaccgtcg cagagggtct gcggcagcgt cttctcaagg tgccgagtgt
     1501 cgtcaaggtg aacctttacg gcgtgcagga cgaaaagatc ttcgtcgagt tcagccacgc
     1561 caagctggcg accctcggcg tgccagcgca ggccctgttc gactcgctgc agaagcagaa
     1621 cgccgtcgtc ccggcgggcg tcgtcgagac atcggctcag cgggtgtcct tgcgcgtcag
     1681 cggcgccctc gacggcgcca aggccgttgc cgaaacgccg gtcgaggcga acgggcgcac
     1741 cttccgtctc ggcgacatcg ccacagtcac gcgcggtttc gaggatccgt ccgactacct
     1801 ggtgcgccag cgcggcaagc cggcgctcgg cctcggcgtc gtcatggcca aaggcgccaa
     1861 catcctggcc ttcggcaagg atgttggcgc ggcgacggcg gagttcatgg cggcggtgcc
     1921 gcgcggcgtc gacatcgagc aggtcgccga ccagccggtg gtggtcgatc acgccatcgg
     1981 cgagttccag cgctcgttcc tcgaggcgct ggcgatcgtg cttgccgtca gcttcgtctc
     2041 gctcggctgg cgcaccggca tcgtcgtggc gctctccgtc ccgctcgtgc tcgccatcac
     2101 cttcgtggcg atgggcgtgc tcggcatcga cctgcaccgc atcagcctgg gcgccctgat
     2161 catctccctc gggctgctcg tcgacgacgc catcatcgct gtcgagatga tgatggtgaa
     2221 gatcgagcag ggctgggacc gcatgcgcgc cgctgccttc gcctggacct cgaccgcgtt
     2281 cccgatgctg accggcacgc tcgtgacggc tgccggcttc ctgccggtcg gctttgccaa
     2341 ttcggcggtc ggcgaatatg ccggcggcat tttctgggtc gtggcgatcg cgctgatcgc
     2401 gtcgtggttc gtcgccgtga tcttcacgcc ctatatcggc gtcaagctgc tgccggcgcg
     2461 cctgtcgaag cacgcgcagg ccgacccgca cgccatttac gagacgcgca gctacaacat
     2521 tctgcgccgc atcgttgcgt tgtgcgtgcg ccggcgtggc ctcacggtcg ccctcacgct
     2581 ggccgctttc gccgcctcga tcgtcggctt cggtcaggtg cagcagcagt tcttcccgct
     2641 gtccgagcgt ccggagctgt ttttccagat gcggctgccg gagggcaccg cgatcggcgt
     2701 gacggccgac agcgcgcgcc aggccgagcg catcctcggg aacgatccgg acatcgccac
     2761 tt
//
LOCUS       DATAIQ010000141         3855 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_285163, whole genome shotgun sequence.
ACCESSION   DATAIQ010000141 DATAIQ010000000
VERSION     DATAIQ010000141.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3855)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3855)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3855
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_285163"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            129..872
                     /locus_tag="VHN20_02460"
     CDS             129..872
                     /locus_tag="VHN20_02460"
                     /EC_number="2.7.7.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012605510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008690 - 3-deoxy-manno-octulosonate
                     cytidylyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HEX2724662.1"
                     /translation="MADPIILIPARLGATRLPNKPLADVLGEPMIVHVWRRACEAGIG
                     PVAVATDARAVADAVVKAGGRAVLTRADHASGSDRIFEAVESLDPEGAHDVVVNVQGD
                     LPTIDPRIIAAATAPLADAAVDIATLVALITREAERDDPNVVKLVGSEVSPNRLRALY
                     FTRATAPHGEGPLYHHIGLYAYRRNALQRFVGLPPSPLEQRERLEQLRALEAGMRIDA
                     MIVDDVPLGVDTAHDLERARELLAARRQP"
     gene            869..1726
                     /locus_tag="VHN20_02465"
     CDS             869..1726
                     /locus_tag="VHN20_02465"
                     /EC_number="4.2.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003600757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004664 - prephenate dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0009094 - L-phenylalanine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydratase"
                     /protein_id="HEX2724663.1"
                     /translation="MTTKMIAFQGEPGANSHIAAQEVHPDWKPLPCATFEDAFAAVSE
                     GAAGLAMIPIENSIAGRVADIHHLLPTSGLHIIGEHFLPIHFQLMATADADLGTIKTV
                     HSHVHALGQCRKIIRKLGLKSVVAGDTAGSAREIAEAKDPTRASLAPRLAASIYGLKI
                     LAEDVEDEAHNTTRFIILAKTPDVAPGANGAMVTSFVFEVRNIPAALYKALGGFATNG
                     VNMSKLESYMLEGRFVATQFYAEVDGHPDDPGLRLALEELEFFSESLTILGVYPAHPF
                     RQTMQDIGQ"
     gene            1873..3546
                     /locus_tag="VHN20_02470"
     CDS             1873..3546
                     /locus_tag="VHN20_02470"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX2724664.1"
                     /translation="MRSIRAKFVAVGAVLLAVSAASGWVSLWSNGSLSASLAQNTLFA
                     SGLRHQGEADMMHDALRADLYRALHAARAEPKLRGEIEKDLQEHLQRFKKNIAESKEL
                     ALPADIRAGLNELDKPLEAYGKMAAELVGAAFTDLAAVEKRLADFGARFDELETALEH
                     ASSRLEAAAEQAQVEAEALATRTARLTSVALACTFLLILGLCGFVFMGVVRPLGRLTL
                     AMNALAGGNRGMEVPGISRRDEIGSMSKAVQVFKDNAVEMDRLRAEQERQRKDSELAR
                     RQAMLELADELDREVRHIVNAVSGAAQDTEGAALKVAASVEQTNSQSTAVAAAAEQTT
                     SNVSSVAAATEELSASFGEVAEQVARAAAMTRGAAESATRTNTLVGDLASVAQRIGDV
                     VKLIGEIAGQTNLLALNATIEAARAGEAGKGFAVVASEVKSLATQTAKATDDISAQIA
                     SMQAATNQAVAAVQEISTTVQDIDVVSNSIAAAVEEQSSATLEITRNVQQAAEGTQGV
                     SENIVGVNDAARAAGSAASVALEAAQGLRAQSDVLANAVSGFLARLRAA"
     gene            complement(3635..>3855)
                     /locus_tag="VHN20_02475"
     CDS             complement(3635..>3855)
                     /locus_tag="VHN20_02475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724665.1"
                     /translation="RRKIMQPNRKESGIDSIRIDPASRGWSGERHACVPMINSGFEVA
                     AAVFEWFGIGSSEPIRLKWHHQRAGSVR"
BASE COUNT          689 a         1314 c         1256 g          596 t
ORIGIN      
        1 gcgagcggcg aggtcgcagg cgatgcttat cccctcccct ccaacccctt ttcgcgggca
       61 ggatgagagc gatgacaacc tcagccgtcc ctgctaagca gcggcccgtc ccagcctgac
      121 cgtgttccgt ggccgatccc atcatcctca tcccggcgcg ccttggcgcg acgcggctgc
      181 cgaacaagcc cctcgccgac gtgctcggcg agccgatgat cgtgcacgtc tggcgccgcg
      241 cctgtgaggc agggatcggc cctgtcgccg tcgccaccga tgcgcgggcc gtcgccgatg
      301 cggttgtgaa ggcgggggga cgggccgtgc ttacccgcgc cgatcacgca tccggctccg
      361 accggatctt cgaagctgtg gaaagtctcg atccggaggg cgcccacgac gtggtcgtca
      421 acgtgcaggg cgacctgccg accatcgacc cgcgcatcat tgccgcggcg accgcgccgc
      481 tggccgatgc ggccgtcgac atcgccacgc tggtcgcgct catcacccgc gaggccgagc
      541 gcgacgaccc caacgtcgtc aagctggtcg gcagcgaggt ttcgccgaac cgcctgcgcg
      601 ccctctactt cacccgcgcc accgctcccc acggcgaggg tcccctctac catcacatcg
      661 gcctatacgc ctaccgccgc aacgccctgc agcgcttcgt gggcctgccg ccctcgccgc
      721 tcgagcagcg cgagcgcctg gagcagttgc gcgcgctcga agcgggcatg cgcatcgacg
      781 cgatgatcgt cgacgacgtg ccgctcggcg tcgatacggc gcacgacctc gagcgggcac
      841 gagagctgct ggccgcacgg agacagccat gacgaccaag atgattgcct tccagggcga
      901 gccgggagcc aactcgcata tcgccgcgca ggaggtgcat ccggactgga agcccctccc
      961 ctgcgccacc tttgaggatg cgttcgcggc cgtgagcgag ggcgcggcgg gcctcgcgat
     1021 gatcccgatc gagaactcga tcgccggacg cgtggccgac atccatcacc tgttgccgac
     1081 ctcggggctg cacatcatcg gcgagcactt cctgccgatc catttccagc tgatggcgac
     1141 cgccgatgcc gatctgggca cgatcaagac cgtgcacagc catgtccatg ccctcgggca
     1201 gtgcagaaaa atcatccgca agctcggcct caaatcggtc gtcgccggcg acaccgccgg
     1261 gtcggcccgc gagatcgccg aagccaagga cccgacgcgc gcgtcgctgg cgccgcggct
     1321 cgccgcgtca atctacggcc tcaaaatcct cgccgaggat gtggaggacg aggcgcacaa
     1381 caccacgcgc ttcatcatcc tggccaagac gccggatgtc gctcccggtg ccaacggcgc
     1441 catggtgacg agcttcgtct tcgaagtgcg caacatcccc gcggccctct acaaggcgct
     1501 cggcggcttc gccacgaacg gggtcaacat gagcaagctc gagagctaca tgctcgaggg
     1561 acgcttcgtc gcgacccagt tctatgcgga ggtcgacggc catcccgacg atcccggctt
     1621 gcgtctcgcg cttgaggaac tcgagttctt ctcggaatcg ctgacgatcc tcggcgtcta
     1681 tccggcgcac ccgttccgcc agaccatgca agacatcgga caatgaggcc cggtcacttc
     1741 aagctgcata ggagaaaact gctgcaaagt gtgcgcccgt cgcattggga aggttagcca
     1801 agcagacgcg ctgaagttag atattcctaa actcgcgcat gcaacaaatt tccgccatcg
     1861 ggcgggggcg acatgcgatc gattcgtgcg aagttcgtgg cggtaggcgc cgttctgttg
     1921 gcggtgagcg cggcaagcgg ctgggtcagc ctctggagca acggcagcct ctcggcgtcc
     1981 ctggcgcaga acaccctttt tgccagcggg ctgcgccacc agggcgaagc cgacatgatg
     2041 catgatgcgc tccgcgccga cctctaccgt gccctgcacg ctgcgcgcgc cgagcccaag
     2101 ctgcgcggcg agatcgaaaa ggatcttcag gaacatctgc agcggttcaa gaagaacatt
     2161 gccgagagca aggagctggc gcttcccgct gatatccggg cggggctcaa cgagctcgac
     2221 aaaccactgg aagcgtatgg caagatggcg gccgagctgg tcggcgccgc cttcaccgat
     2281 ctagccgccg tcgagaagcg cctcgccgac ttcggcgcgc ggttcgatga actcgagacg
     2341 gcgcttgaac acgcgagctc gcggctcgag gcggccgccg agcaggcaca ggttgaggcg
     2401 gaagctctgg ccacgcggac ggcgcggctg acctccgtcg cgctcgcctg cacgttcctc
     2461 ctgatcctgg gactgtgcgg gttcgtgttc atgggcgtcg tgcggcctct cggccggctg
     2521 acgctggcga tgaatgcgct cgcgggcggc aaccgcggca tggaagttcc tgggatcagc
     2581 cgccgtgacg agatcggctc gatgtcgaag gcggtccagg tgttcaagga caatgccgtc
     2641 gagatggatc ggctgcgcgc agagcaggag cggcagcgga aggactcaga gctggcgcgc
     2701 cggcaggcaa tgctcgagct cgccgacgag ctcgatcgcg aggtgcggca catcgtcaac
     2761 gccgtgtccg gtgccgccca ggacaccgag ggtgccgcgc tgaaggtcgc ggcttcggtc
     2821 gagcagacca acagccaatc gaccgcggtc gccgcagcgg ccgagcaaac gacgtccaac
     2881 gtgtcctcgg tggcggccgc aacagaggag ctgtccgcct cgttcggcga ggtcgccgag
     2941 caggtggcgc gggcggcggc gatgacgcgc ggagcggccg aatcggcaac gcgcaccaac
     3001 accctggtcg gcgacctggc gagcgttgcg caacgtatcg gcgacgtcgt caagctgatc
     3061 ggggagattg ccggtcagac caacctgctg gcgctcaacg ccacgatcga agcggcccgc
     3121 gcgggcgaag ccggcaaggg tttcgcggtc gtcgccagcg aggtcaagtc gctcgccacc
     3181 cagacggcca aggccactga cgacatctcc gcccagatcg catcgatgca ggcggccacc
     3241 aatcaggcgg tcgcggccgt gcaggagatc agcaccaccg ttcaggatat cgacgtggtc
     3301 tccaactcga tcgcggcagc agtcgaagaa cagtcgtccg ccaccctcga aatcacgcgc
     3361 aacgtgcagc aggcagcaga gggcacccag ggcgtctcgg agaatatcgt cggcgtcaac
     3421 gacgccgccc gcgcggcagg atcggcggcg agcgtcgcgc ttgaagcggc gcagggcttg
     3481 cgcgcccaat ccgacgtgct ggccaatgcc gtgagcggct tcctggcccg gctgcgggcg
     3541 gcgtaaagcg tcttgcggcg aaaccggtct gcctcgccaa agaaacgcgt ctccagaaaa
     3601 tgcgcgagcc gcttcctcaa gggtgaaagc ggcgtcacct caccgatccg gcacgctggt
     3661 ggtgccactt gagccgtatc ggttcggatg aaccgatacc gaaccattcg aagacggccg
     3721 cggcaacttc aaatccggag ttgatcatcg gcacgcatgc gtgccgctca ccggaccatc
     3781 cccttgaagc gggatcaatt cggattgaat cgatcccgct ctctttccta ttgggctgca
     3841 tgatctttct tcggc
//
LOCUS       DATAIQ010000142         4522 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_188213, whole genome shotgun sequence.
ACCESSION   DATAIQ010000142 DATAIQ010000000
VERSION     DATAIQ010000142.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4522)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4522)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4522
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_188213"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..682)
                     /locus_tag="VHN20_02480"
     CDS             complement(<1..682)
                     /locus_tag="VHN20_02480"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX2724666.1"
                     /translation="MRRLFLTTVATCLALLALGLFAFQWVSAPTTLRVAVGPMDSDDT
                     RLMVAVMQTLARERESVRLKLVLTDGTAASAAAIDDDTADIAVVRTDVGMPTKGQTVA
                     IMHRDAALLLSTEHKGISKVSGLWGRNVGVLRRQQANTRLLETILNHYEIPKDSVTTV
                     RLTSPDEVEQALRSNQIDAVLAVGALGTAVLNETAAAVVRAGGGPPVFIPIGEAAAIA
                     QRLPVVEPF"
     gene            complement(701..1837)
                     /locus_tag="VHN20_02485"
     CDS             complement(701..1837)
                     /locus_tag="VHN20_02485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018262641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-2 protease family protein"
                     /protein_id="HEX2724667.1"
                     /translation="MLWSIPVGVIAGTVVRLHVTFLLFLVWIGANYWRLGGAEAAFDA
                     ILFMVLLFACVLAHEFGHIVAARRYGIRTPEVTLWPIGGVASLERIPDKPSEELVVAL
                     AGPAVNVVIALVLIAVQGISLGDAAMTELENPRANLVTRLIAANIFLVVFNMIPAFPM
                     DGGRVLRALIAMRRSHAEATRIAGRIGQVAAFLFALAGLFTNPMLIIIGLFVYLAATA
                     ETQHVAFRDGTKGLAVREAMMSKVETLPPTANLDDVVNCLIRTSQKEFPIVDGAGRPR
                     GLVTRDSLIPALRDGGPLTPILDIMTRDIPAVRSREPLESALGVLNRAKAPALFIVGD
                     DGSFEGLLTPETVGELMLIQSIRPDWRFRMRRSQGSPWTLAQRD"
     gene            1999..2421
                     /locus_tag="VHN20_02490"
     CDS             1999..2421
                     /locus_tag="VHN20_02490"
                     /EC_number="1.11.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA];
                     GO_process: GO:0006972 - hyperosmotic response [Evidence
                     IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0033194 - response to hydroperoxide
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HEX2724668.1"
                     /translation="MIRKARAVWRGTGKDGNGRLSSDSGVLSDTAYSFKTRFENEKGT
                     NPEELIAAAHAGCFAMALAFQLQTAGYNPTELDATAAVSLEKDGQGFRISRSALTLRA
                     QVPGIDKAKFEELVQAAKEGCPVSKVLNAEVTLDSALA"
     gene            2516..3166
                     /locus_tag="VHN20_02495"
     CDS             2516..3166
                     /locus_tag="VHN20_02495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490778.1"
                     /note="This protein belongs to the uracil DNA glycosylase
                     superfamily, members of which act in excision repair of
                     DNA. However, it belongs more specifically to UdgX branch,
                     whose founding member was found to bind uracil in DNA
                     (where it does not belong), without cleaving it, appears
                     to promote DNA repair by a pathway involving RecA, rather
                     than base excision; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UdgX family uracil-DNA binding protein"
                     /protein_id="HEX2724669.1"
                     /translation="MSGAHEPWEREPKTLAQLNKIIKASEPLVPGATQAVLGEGPEDA
                     RIAFVGEQPGDQEDQQGRPFVGPAGKLLDRALAEAGIDRSDVYMTNAVKHFKFEHRGG
                     RRIHSKPTAREISHYRPWLIKELELVHPQLVVALGGTAVHALMGKSIPIARARGPGQF
                     VGGFNGYVTVHPSYLLRVPDEASKREAFKSFVEDLRRIRSLAKNDNRKRPAAELTA"
     gene            3163..3468
                     /locus_tag="VHN20_02500"
     CDS             3163..3468
                     /locus_tag="VHN20_02500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020607891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724670.1"
                     /translation="MMTIGRRLGVVVAWLAGNFSTTAIAQESIVTAQKPFSAAPARPG
                     DIAVREEFEAARRAGTIAAYDLFVARHPEHALADTARRERERLTREGAARPRRGSKP"
     gene            3552..>4522
                     /locus_tag="VHN20_02505"
     CDS             3552..>4522
                     /locus_tag="VHN20_02505"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012336397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase domain-containing protein"
                     /protein_id="HEX2724671.1"
                     /translation="MANGRTRREPAFDARADAGRLDVRLSREDRAGGDMAKSGRRGSR
                     HNDDGGGRGRKAKRQRSFFGRLVYGTMVIGLWGVIGLAGIVAYYASQLPPIDQLAVPK
                     RPPNIAILASDGTLLANRGETGGRAVALKELPPYLPKAFVAIEDRRFYEHLGIDPVGI
                     GRAVMRNVTRGGVTQGGSTLTQQLAKNLFLTQERTASRKIQEAILALWLERRYSKNQI
                     LELYLNRVYFGAGAYGVEAAAQRYFGKSAREVTLPEAAVLAGLVQAPSRLAPNRNPEA
                     AQARAQLVLTAMSEQGYIRPTQMMAALTAPAKTNPAYGANSANYAADL"
BASE COUNT          791 a         1542 c         1560 g          629 t
ORIGIN      
        1 cgaaaggctc gaccacgggc aggcgttgtg caatggcggc cgcttcgccg atcgggatga
       61 acaccggagg gcccccgccg gcgcgcacca cggccgcagc cgtttcgttg agcaccgccg
      121 tcccgagcgc accgaccgca agcacggcgt cgatctggtt gctacgcagc gcctgctcga
      181 cctcgtcggg cgacgtgagg cgtaccgtgg tcacgctgtc cttcgggatc tcgtaatgat
      241 tcaggatggt ctcgagcagg cgtgtgttgg cctgctgccg gcgcagaacg ccgacattgc
      301 ggccccagag gccggacacc ttcgagatgc ccttgtgctc ggtgctcagc aagagcgcgg
      361 cgtcgcggtg catgatcgcg acggtctgcc ccttggtggg catgcccacg tcggtgcgca
      421 cgacggcgat atcggcggtg tcgtcgtcaa tcgccgcggc gctcgcggcg gtgccgtcgg
      481 tgaggacaag cttcaaccgg accgactcgc gttcgcgggc gagcgtctgc atcacggcga
      541 ccatcaggcg cgtgtcgtcg ctgtccatgg gaccgacggc gacgcgcagg gtcgtcgggg
      601 ccgagaccca ttggaacgcg aacagcccca gcgcgagaag cgcgaggcag gttgcgaccg
      661 tggtcaggaa aagccggcgc atgcccggaa agtgatccca tcagtcccgc tgcgcaaggg
      721 tccaggggga gccttgtgag cggcgcatcc ggaatcgcca gtcgggccgg atgctctgga
      781 tcagcatcag ctcgccgacc gtctccggcg taaggagccc ctcgaagctg ccgtcgtccc
      841 cgacaatgaa gagcgccggc gccttggcgc gattgagcac gccgagggcg ctttcgagcg
      901 gctcgcggct gcggacggca gggatgtcgc gggtcatgat gtcgagaatc ggcgtcaatg
      961 ggccgccgtc ccgcaaagct ggaatcaggc tgtcgcgggt cacgagcccg cgcggacggc
     1021 cggcgccgtc gacgattggg aactcctttt gcgacgtgcg gatcaggcaa ttaacgacgt
     1081 cgtcaagatt cgccgtcggc ggcagggtct cgaccttgct catcatggcc tcgcggacgg
     1141 ccaagccctt ggtgccgtcg cggaacgcca cgtgctgcgt ctcggccgtg gcggccaggt
     1201 aaacgaacag cccgatgatg atcagcatcg ggttggtgaa caggccggcg agcgcgaaca
     1261 gaaaggccgc cacctggccg atgcggccgg cgatgcgcgt cgcctcggca tggctgcggc
     1321 gcatggcgat cagcgcgcgc aggacgcggc cgccgtccat cgggaaagcg gggatcatgt
     1381 tgaaaacgac gagaaagatg ttggccgcga tcagccgcgt gacgaggttg gcgcgcggat
     1441 tctcgagctc ggtcatggcg gcatcgccga gcgagatgcc ctgcaccgcg atcaggacga
     1501 gcgcgatcac gacattcacg gccggcccgg caagcgcgac caccagttcc tcgctcggct
     1561 tgtcgggaat gcgctcgagg ctggcgacgc cgccgatcgg ccacagcgtc acctccggcg
     1621 tgcggatgcc gtaacggcgg gccgcgacga tgtgcccgaa ttcgtgagcc agcacgcagg
     1681 cgaagagcag caccatgaac aagatcgcat cgaacgccgc ctcggccccg ccgagccgcc
     1741 agtaattggc gccgatccag acgaggaaca gcaggaacgt cacgtgcagg cggaccacgg
     1801 tgcccgcaat gacgccgacc ggtatggacc agagcatgtc cgtctcccgc gccgcgggcc
     1861 gcgacccgac gcacgacaac gtcagccgcg acgctcggtt cggtcccctg ccggggcgtc
     1921 ccgcctcgcg tgccgagacg ccgcatgtta catgacgggg ggcctcgagg cactcacgat
     1981 cgagcaaagg acagtcttat gatccgcaaa gcacgagccg tctggcgcgg caccggcaag
     2041 gacggcaatg gcaggctcag cagcgattcc ggcgtgctct ccgacacggc ctactcgttc
     2101 aagacgcggt tcgagaacga gaaagggacg aacccggagg agctgatcgc cgcggcccat
     2161 gccggctgct tcgcaatggc cctcgccttt cagctgcaga cggccggcta caatccgacc
     2221 gagctcgatg cgacggcggc cgtgtcgctg gagaaggacg gccagggctt ccgcatcagc
     2281 cgctcggcgc tgacgctacg cgcccaggtc ccggggatcg acaaggcgaa gttcgaggag
     2341 ctcgtgcagg ccgccaagga aggttgcccc gtctcaaagg tcctcaacgc cgaggtcacc
     2401 ctcgactcgg cgctggcgta agccgcgcgc gccggcaggc agcgctgcgg gcccgaaccg
     2461 cccggtcgtg cgttgacacg atggtcggaa ggcgaaggac atgccgacga aacgcatctc
     2521 aggcgcccac gagccgtggg agcgcgagcc gaaaacgctc gcgcagctca acaagatcat
     2581 caaggcttcc gagccgctgg tgcccggcgc cacgcaagcg gtcctaggcg aagggccgga
     2641 ggacgcgcgc atcgctttcg tgggggagca gccgggcgac caggaggacc agcaggggcg
     2701 tccgttcgtc gggccggccg gaaagctgct cgaccgggcg ctcgccgagg ccgggatcga
     2761 ccgcagcgac gtctacatga cgaacgcggt caagcacttc aagttcgagc accgcggcgg
     2821 acgacgcatc cactccaagc cgacggcgcg ggaaatcagc cattacaggc cgtggctgat
     2881 caaggagctc gagctggttc atccgcagct cgtcgtggcg ctcggcggca ccgccgtgca
     2941 tgccctgatg ggcaagagca tccccatcgc gcgtgcccgc ggcccggggc aattcgtcgg
     3001 cggcttcaac ggctacgtca ccgtgcatcc gtcgtatctg ctgcgcgtcc ccgacgaggc
     3061 ctccaagcgg gaagcgttca agtccttcgt cgaggacctg cggcgcatcc gcagcctggc
     3121 aaagaacgac aaccgcaagc gcccggcggc ggaattgacg gcatgatgac catcgggcgc
     3181 cgccttggcg tcgtggtcgc atggctcgcc ggcaattttt ccacgaccgc tatcgcgcag
     3241 gagtccatcg tgactgccca aaagccgttc agcgccgcac cggccaggcc gggcgacatt
     3301 gccgtccgcg aggaattcga ggcggcccgc cgcgccggca cgatcgctgc ctacgacctg
     3361 ttcgtcgctc gccatccgga acatgcgctg gccgacacgg cgcgccgcga gcgggagcgc
     3421 ctgacgcgcg agggtgcagc ccggcccagg cgcggctcca aaccttaacc gttcgtcaaa
     3481 ccgccacatt taacctgccc ttcagcggct tcacccgtcc aagcggggca agcgagcggg
     3541 gacattctcg aatggcgaac ggacgcaccc ggcgcgagcc ggcgttcgac gcgcgcgccg
     3601 acgcgggaag gctggacgtg cgcctgtcgc gcgaggacag ggcgggaggt gacatggcga
     3661 aatcaggccg ccgcggctcg cgtcacaacg acgacggcgg cgggcgcggc cgaaaggcga
     3721 agcggcagcg ctcgtttttc ggacggctcg tctacgggac gatggtgatc gggctatggg
     3781 gcgtgatcgg actggccggg atcgtcgcct attacgcctc gcagctgccg cccatcgacc
     3841 agctcgccgt gccgaagcgg ccacccaaca tcgccatcct ggcgagcgac ggcacgctgc
     3901 tcgcgaaccg cggtgaaacc ggcgggcgcg ccgtcgccct gaaggaattg ccgccctacc
     3961 tgccgaaggc cttcgtcgcc atcgaggacc gtcgcttcta cgagcatctc ggcatcgatc
     4021 ccgtcggcat cggacgcgcc gtcatgcgca acgtcacgcg gggcggcgtg acgcaaggcg
     4081 gctccaccct gacgcagcag ctcgccaaga atctgtttct gacgcaggag cgcacggcct
     4141 cgcgcaagat ccaggaagcg atcctggccc tgtggctcga gcgccgctac tcgaagaacc
     4201 agatcctcga gctctacctc aaccgcgtct atttcggcgc cggcgcctac ggcgtcgagg
     4261 cggcggcgca gcgctatttc ggcaagtcgg cgcgcgaggt cacgctgccc gaggcggcgg
     4321 tgctcgccgg gctcgtgcag gcgccatccc gcctcgcgcc gaaccgcaac ccggaggcgg
     4381 cgcaggcgcg ggcgcagctc gtgctcacgg cgatgagcga gcagggctat atccgtccga
     4441 cgcagatgat ggcggcgctc accgcaccgg cgaaaaccaa ccccgcctac ggcgccaact
     4501 cggccaacta cgcggccgac ct
//
LOCUS       DATAIQ010000143         1775 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_423266, whole genome shotgun sequence.
ACCESSION   DATAIQ010000143 DATAIQ010000000
VERSION     DATAIQ010000143.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1775)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1775)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1775
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_423266"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..203)
                     /locus_tag="VHN20_02510"
     CDS             complement(<1..203)
                     /locus_tag="VHN20_02510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724672.1"
                     /translation="MPARGLTILSGQGRWRWPDFARRLLAVGTEEYPPKVRRRLQTLN
                     AMAYLIVVLSTVYAAIYALDDLAT"
     gene            complement(284..859)
                     /gene="rimM"
                     /locus_tag="VHN20_02515"
     CDS             complement(284..859)
                     /gene="rimM"
                     /locus_tag="VHN20_02515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017487370.1"
                     /note="Essential for efficient processing of 16S rRNA;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HEX2724673.1"
                     /translation="MTSPDAPASPRPAEEKGLVLLGEFGRAHGLKGEVRLKSFTDDPT
                     AIAGYGPLQSPDGRWFTLKQVRPAGGGSADLVIARVDGIATREAAEALNRVRLYAPRE
                     RLRGAEGDDEFLLADLIGLTVKDKNGQVVGTIVAVPNYGGGDLLEIAPPGGGPTGLLP
                     FSQSFVPVVDVAAGEVLADPPDGLFEEPGSA"
     gene            complement(944..1300)
                     /gene="rpsP"
                     /locus_tag="VHN20_02520"
     CDS             complement(944..1300)
                     /gene="rpsP"
                     /locus_tag="VHN20_02520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HEX2724674.1"
                     /translation="MSLKIRLTRAGAKKRPYYRIVIADSRAPRDGRFIEKVGAYDPMK
                     KKDDPARVTLETEKVRAWLAKGAQPTDRVLRFLDAAGLMKRAPRNNPQKAQPGKKAQE
                     RAAARGASGEAAGETA"
     gene            complement(1392..>1775)
                     /locus_tag="VHN20_02525"
     CDS             complement(1392..>1775)
                     /locus_tag="VHN20_02525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003601551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HEX2724675.1"
                     /translation="KASRKKRIAAGSGTKVEEVNKLLKMHRQMADMMKMMGGGKGKGL
                     GAALGNMFGLGGGMPQPTPEQIAAMQKQMGGNMPGGLTGAGGALPPLPPGLAGGKGPA
                     LPGLPGLGSAKLPGLGSFPFGGKKK"
BASE COUNT          232 a          631 c          609 g          303 t
ORIGIN      
        1 gtggcgaggt cgtcgagcgc gtagatcgcc gcatagaccg tggacagaac cacgatcagg
       61 taggccatgg cgttgagggt ctgcaggcgc cggcgcacct tcggcggata ttcttcggtg
      121 ccgacggcga ggagccggcg cgcgaaatca ggccagcgcc agcggccctg tccactcagg
      181 atcgtcagcc cgcgtgccgg catggcctgc cgcgcctctg tgcacccatg tggcccacca
      241 ggtcgcccat aacggcctat gatcgcggat cgggcagcct cgctcaagcg gaaccgggtt
      301 cctcgaacag cccgtccgga ggatcggcga gcacctctcc ggcggcgacg tcgaccacgg
      361 gcacgaagct ctggctgaag ggcagcagcc cggtcgggcc gccgccgggc ggagcgatct
      421 cgaggagatc gccgccgccg taattcggca cggccacgat cgtcccgacc acctggccgt
      481 tcttgtcctt gacggtcagc ccgatcaggt cggcgagcag aaactcgtca tctccctccg
      541 cgccgcgcag ccgctcgcgc ggggcataga ggcgcacccg gttgagcgcc tcggcggcct
      601 cgcgtgtggc gattccgtcg acgcgcgcga tcacgagatc ggccgagccg ccgccggcgg
      661 ggcggacctg tttcagggtg aaccaccgcc cgtccgggct ttgcagcggg ccgtagccgg
      721 cgatcgcggt gggatcgtcg gtgaacgatt tcagccgcac ctcgcccttg aggccgtgcg
      781 cccgcccgaa ctcgccgagc agcacgagcc ccttctcttc ggcggggcga ggggacgctg
      841 gcgcatccgg cgaggtcacg gtctcctcac gcggtcgctg cgcgacccga cctcttccgg
      901 ttgccgaaag gagatcgccg ccccgcttcg ccatcgatac ggcttacgcg gtttcgccgg
      961 ccgcttcgcc cgaggctccg cgcgcggcgg cgcgctcctg cgccttcttg ccgggctgcg
     1021 ccttctgcgg attgttgcgc ggggcgcgct tcatgagacc ggcggcgtcg aggaagcgca
     1081 gcacgcggtc ggtcggctgc gcgcccttcg cgagccacgc gcgcaccttc tcggtctcga
     1141 gcgtgacgcg ggccggatcg tccttcttct tcatcggatc gtaagcgccg accttctcga
     1201 tgaagcggcc gtcgcgcggg gcgcggctgt cggcgatcac gatgcgataa tacgggcgct
     1261 tcttggcgcc ggcgcgggtg agacggatct tcagggacat gtttgctcct tttcgctttg
     1321 tccattgaac cgggcggatg gcgcgtcgcg gatggcgtga tctctattcg ccatccgtca
     1381 cgcgcgatcc gctatttctt cttgcctccg aacgggaagc tgccgaggcc gggcagcttg
     1441 gcgctgccga gacccggcag gcccggcaac gccgggccct tgccgccggc aaggccgggc
     1501 ggcagcggcg gcagcgcgcc gccggcgcca gtaaggccgc ccggcatgtt gccgcccatc
     1561 tgcttctgca tcgcggcgat ctgctccggc gtcggctgcg gcatgccgcc gccgagaccg
     1621 aacatgttgc cgagcgcggc gccgagtcct ttgcctttgc cgccgcccat catcttcatc
     1681 atgtcggcca tctgccgatg catcttgagg agcttgttga cctcctcgac cttggtgccc
     1741 gagccggcgg cgatgcgctt cttgcgcgac gcctt
//
LOCUS       DATAIQ010000144         3739 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_100532, whole genome shotgun sequence.
ACCESSION   DATAIQ010000144 DATAIQ010000000
VERSION     DATAIQ010000144.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3739)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3739)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3739
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_100532"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..191
                     /locus_tag="VHN20_02530"
     CDS             <1..191
                     /locus_tag="VHN20_02530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012336342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="S24 family peptidase"
                     /protein_id="HEX2724676.1"
                     /translation="DTANTGDIIVALIDEEEATLKRFRRRGSSIALEAANPSHETRVL
                     GPDRVKIQGKLVSLVRRY"
     gene            412..2034
                     /locus_tag="VHN20_02535"
     CDS             412..2034
                     /locus_tag="VHN20_02535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002711250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HEX2724677.1"
                     /translation="MIRLDKIGKQNGKQILFIEASAALQKGEKVGLVGPNGAGKTTLF
                     RMITGEEQPDEGQVATDRGITIGYFSQDVGEMAGRSVVSEVMDGAGPVSAVAAELKAL
                     ETALADPDRADEMDAIVERYGEVQARFQELDGYALEGRAYEVLAGLGFSQEMMEGDVG
                     ALSGGWKMRVALARILLMKPDVMLLDEPSNHLDLESLIWLENFLKGYDGALLMTSHDR
                     EFMNRIVNKIVEIDGGTLTTYSGDYAFYEQQRALNEKQQQAQFERQQAMLAKEIKFIE
                     RFKARASHAAQVQSRVKKLDKIERVEPPRRRQSVAFDFPPAPRSGDDVVTLKNVHKRY
                     GRRSIYAGLDFAVRRKERWCVMGINGAGKSTLLKLVAGSTEPDDGTVAVGGSVKLGYF
                     AQHAMDLLEGDRTVFQFLEDAFPQAGQGSLRALAGCFGFSGDDVEKRCRVLSGGEKAR
                     LVMARMLYDPPNFLVLDEPTNHLDMATKEMLITALSRYEGTMLFVSHDRHFLAALSNR
                     VLELTPEGVHKYGGGYIEYVARTGQEAPGLRS"
     gene            complement(2074..2847)
                     /locus_tag="VHN20_02540"
     CDS             complement(2074..2847)
                     /locus_tag="VHN20_02540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014332854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HEX2724678.1"
                     /translation="MASEARSPRLAVLIDADNASAKIADGLFEEIAKIGEASVRRIYG
                     DFSNPRSKAWADKLSKHAIIPQQQFAYTVGKNASDIALVIDAMDLLHMGRFDGFCLVS
                     SDSDFTRLAARIREHGVDVFGFGEQKTPESFRQACRRFVYTENLLPSAVASDQDATPG
                     TQPLLPPSAATPIIKKVIAQMETEDGWVPLRAVGNQLANLASDFDPRTFGFRKLTDLV
                     RKTDAFDIDQLEGGALRIRTKRPSTGRPRSRRGKVGSAS"
     gene            complement(2965..>3739)
                     /locus_tag="VHN20_02545"
     CDS             complement(2965..>3739)
                     /locus_tag="VHN20_02545"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010684513.1"
                     /note="catalyzes the formation of N-carbamoyl-L-aspartate
                     from (S)-dihydroorotate in pyrimidine biosynthesis;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HEX2724679.1"
                     /translation="QGHRDGIFTAAKLYPAHATTNSAHGVTSIETIMPVLEAMGENGI
                     PLLTHGEITRPEVDIFDREKGFIDEVLVPTLEHIPSLRVVAEHITTEDGVQVVRAYKD
                     RMGATITPQHLLYNRNAIFQGGLRPHMYCLPVLKREPHRLALRAAATRGEANFFLGTD
                     TAPHLRTLKETACGCAGVFSAPVAIQAYLKVFAEEDALDRFEAFASLNGPAFYRLPPN
                     ADTVTFAEGEGITAGRVQVGNEDIVPLFEGEAVGWGQLG"
BASE COUNT          668 a         1211 c         1236 g          624 t
ORIGIN      
        1 aggacacggc gaataccggc gacatcatcg ttgccctgat cgacgaggag gaggcgacct
       61 tgaagcgctt ccgccggcgc ggctcctcga tcgccctcga ggccgccaat ccgagccacg
      121 agacgcgcgt gctcggcccc gatcgcgtca agatccaggg caagctcgtc agcctggtgc
      181 gccgctactg acgtgcctat atgagccttg gtcccgagga gccgctgcaa gcagcgttcc
      241 gaaggacgaa ggccacccca gaaaaacacg gtgaccacag ccgctctcgc aaatcatgcg
      301 agggcggtcg gcgcttttgg acgggccggt ggccggcctg ctcttccgtt cgcaggtgac
      361 atgacctaag ggcagtcgcc tcactactct cgtctacctc ccgcgcacgc aatgatacgt
      421 ctcgacaaaa tcggaaaaca gaacggcaag cagattctct tcatcgaggc gtccgctgct
      481 ctccagaagg gtgaaaaagt cgggctcgtc ggcccgaatg gcgccggcaa gacgacgctc
      541 ttccgcatga tcaccggcga ggagcagccc gacgaaggcc aggtcgcgac cgaccgcggc
      601 atcacgatcg gctatttcag ccaggatgtg ggcgagatgg ccgggcgcag cgtagtgtcc
      661 gaggtcatgg acggcgccgg ccccgtgagc gcggtcgccg cggagctgaa ggcgctggag
      721 acggccctcg ccgacccgga ccgggcggac gagatggacg ccatcgtcga acgctacggc
      781 gaggtgcagg cccgcttcca ggagctcgat ggctacgccc tcgagggccg cgcctacgag
      841 gtgctcgcgg gcctcggctt cagccaggag atgatggagg gcgacgtggg cgccctgtcc
      901 ggcggctgga agatgcgggt cgcgctggcg cgcatcctgc tgatgaagcc cgacgtgatg
      961 ctgcttgacg agccgagcaa ccatctcgac ctcgagagcc tgatctggct cgagaatttt
     1021 ctgaaaggct acgacggcgc gctgctgatg acctcgcatg accgcgagtt catgaaccgc
     1081 atcgtcaaca agatcgtcga gatcgacggc ggcacgctca ccacctattc gggcgactac
     1141 gcgttctacg agcagcagcg cgcgctcaac gagaagcagc agcaggccca gttcgagcgc
     1201 cagcaggcga tgctcgccaa ggagatcaag ttcatcgagc gcttcaaggc gcgcgcgtcg
     1261 cacgcggccc aggtgcagag ccgcgtcaag aagctcgaca agatcgagcg ggtcgagccg
     1321 cccaggcgcc gacagagcgt ggccttcgac ttcccgccgg cgccgcgctc gggcgacgat
     1381 gtcgtcaccc tgaagaacgt gcacaagcgc tacggccgcc gcagcatcta cgccgggctc
     1441 gatttcgcgg tccggcgcaa ggagcgctgg tgcgtgatgg gtatcaacgg cgccggcaag
     1501 tcgacgctgc tcaagctggt ggcaggctcg accgagccgg atgatggcac cgtggcggtc
     1561 ggcggcagcg tgaagctggg ctacttcgcc cagcacgcca tggacctgct cgagggggac
     1621 cgcacggtct tccagttcct cgaggacgcc ttcccgcagg ccggccaggg ctcgctgcgc
     1681 gcgctcgccg gctgcttcgg gttttccggc gacgacgtcg agaagcggtg ccgggtgctg
     1741 tcgggcggcg agaaggcccg cctggtgatg gccaggatgc tctacgaccc gccgaacttt
     1801 ctggtcctgg acgagccgac gaaccacctc gacatggcca cgaaggaaat gctgatcacc
     1861 gccctatccc gctacgaagg cacgatgctg ttcgtctcgc acgaccggca tttcctggcc
     1921 gccttgtcca atcgcgtgct cgagctcacg cccgagggcg tccacaaata cggcggcggc
     1981 tacatcgaat acgtggcgcg caccggccag gaagcgcccg gcctgcgcag ctgaccggga
     2041 cgcgactttg aaggctgaag gtcagccact gcttcaggag gctgaaccga ctttccctcg
     2101 cctcgatctc ggccgacctg tcgaaggccg cttcgtgcga atgcgaagag cgccgccttc
     2161 aagttggtcg atgtcgaacg catcggtctt gcgcacgaga tcggtcagct tgcggaagcc
     2221 gaacgttctc ggatcgaagt cggatgccag attcgccagc tgattgccca ccgcgcgcag
     2281 aggcacccag ccgtcttcgg tctccatctg ggcgatcacc ttcttgatga tcggggtcgc
     2341 ggcgctcggg ggcagcagcg gttgcgtgcc gggtgtcgca tcctgatcgc ttgcgacggc
     2401 actgggcagc aggttttccg tgtacacgaa gcgtcgacac gcttgccgaa agctctccgg
     2461 cgttttctgc tcgccgaacc cgaacacgtc gacgccgtgc tcacggatgc gcgcggcaag
     2521 tcgcgtgaag tcgctgtcgg aggaaaccag gcagaacccg tcgaaccggc ccatatgaag
     2581 caagtccatt gcatcgatca ccaacgcgat gtcggacgca ttcttcccca ccgtataggc
     2641 aaattgctgt tggggtatga tggcgtgttt ggacagtttg tcggcccagg ccttcgagcg
     2701 cggatttgag aagtcgccat agatgcggcg aacgctcgcc tccccgatct tggcgatctc
     2761 ctcgaacaag ccgtctgcaa tcttggctga agcattatca gcatcgatga gaaccgcgag
     2821 gcgcggcgac cgggcttcag aggccatcat ggggttcctt gtccgttgag gttattcgcc
     2881 gagtaacata tctcgatgcg tcgccccacc aagaccgggc agaccgggcg catcaaccag
     2941 cctgcgcggc cccgccccgc aggctcagcc caactggccc cagccgacgg cttcgccctc
     3001 gaacagcggg acgatgtcct cgtttccgac ctggacgcgg cccgcggtga tcccctcgcc
     3061 ttccgcgaac gtcaccgtgt cggcgttcgg cggtagccgg tagaaggcag gcccgttcag
     3121 ggaggcgaac gcctcgaaac ggtccagggc atcctcctcg gcgaagactt tcaggtaggc
     3181 ctggatggcg accggcgcgc tgaacacgcc ggcgcagccg caggccgttt ccttgagggt
     3241 gcgaaggtgc ggagccgtgt cggtgccgag gaagaagttc gcctccccgc gggtcgccgc
     3301 tgcccgcagg gcgagccggt ggggctcccg cttcaggaca gggaggcaat acatgtgcgg
     3361 gcgcaggccg ccctgaaaga tggcattgcg gttatagagg aggtgctggg gcgtgatggt
     3421 cgcgcccatg cggtccttgt aggcgcgtac cacctgcacg ccatcctcgg tcgtgatgtg
     3481 ctccgccacg acccgcagac tggggatgtg ctccagagtc ggcacgagca cttcgtcgat
     3541 aaagcctttc tcgcgatcga agatgtcgac ctcgggccgc gtgatctcgc catgcgtcag
     3601 caggggaatg ccgttctcgc ccatcgcctc gaggaccggc atgatcgtct cgatcgacgt
     3661 cacgccatgc gcggagttcg tcgtggcgtg ggccgggtag agcttggcgg ccgtgaagat
     3721 gccgtcgcga tgcccctgg
//
LOCUS       DATAIQ010000145         2326 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_8138, whole genome shotgun sequence.
ACCESSION   DATAIQ010000145 DATAIQ010000000
VERSION     DATAIQ010000145.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2326)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2326)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2326
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_8138"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..708
                     /locus_tag="VHN20_02550"
     CDS             <1..708
                     /locus_tag="VHN20_02550"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="vanadium-dependent haloperoxidase"
                     /protein_id="HEX2724680.1"
                     /translation="ANTRPWLLKKADHFRPGPPPALSSEAWARDYNEVKSLGGVKSTA
                     RTPEQTEAVKFWGNTNFGPSWQTAARHLSGAKELGLADTARVFALLNMSLANNYVLNW
                     DAKYHYMFWRPVTAIRNGDIDGNDATERDPGWTPLNMTPMHPEYPSQATINATVAAAI
                     LESVFGPVSAIPLTVSDAADAKRTRHFASIADMVEEQKNVRIWGGVHYRSAIDTGAEM
                     GRKVAAYMMDNALKPAP"
     gene            complement(770..1696)
                     /gene="gcvA"
                     /locus_tag="VHN20_02555"
     CDS             complement(770..1696)
                     /gene="gcvA"
                     /locus_tag="VHN20_02555"
                     /inference="COORDINATES: protein motif:HMM:NF008352.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator GcvA"
                     /protein_id="HEX2724681.1"
                     /translation="MPAPDGSPLERVHRLDYLKAMRAFEATARHLSFSKAAKELCVTQ
                     GALSHHVAMLESSLGAKLFLRYHRSIELTPKGELLFRSLREAFDLIEDGVNRVCGGSA
                     ARTLRIKLPPTFAIRWLIPRLAKLHGAEPELDVQITTSHRTVDFIREDTDVAIYSGVQ
                     PPAGLISKRLFGETLTPVCSPEFMAASSALSEPSDLRGCTLLCSLHRPLDWPLWLAAA
                     GVNGIDGNSGLKFENSSLAYQAAIDKLGIALAQVALVADDLKVGRLVRPFSTTVATDS
                     AYFIVYPSRSRARPNVRAFEEWLLSECGHVPH"
     gene            complement(1683..>2326)
                     /locus_tag="VHN20_02560"
     CDS             complement(1683..>2326)
                     /locus_tag="VHN20_02560"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX2724682.1"
                     /translation="SPLQTFRFTLQFISSERFWPDFYETFIACTLAVLCAVSIGLTTG
                     LVLGFGRLAGQVFEPMLVALYSIPKLTLYPILLLAFGLGMSAKVAFGAIHGIIPIALF
                     TINAVRNIRPVLIKTGQVLQYSPWQMAWKVLIPAALPEIVSGLRIGFSLTLVGTLLGE
                     MFASQRGLGNLLMRAIGLHNVDLIMAIAVIVTTVAAIGSSLLLALDRRLHARA"
BASE COUNT          434 a          743 c          811 g          338 t
ORIGIN      
        1 gcgaacacac ggccctggct gctcaagaag gccgaccatt tccggcccgg cccgccgccg
       61 gcgctgtcga gcgaggcctg ggcgcgcgac tacaacgagg tgaagagcct gggcggcgtc
      121 aagagcacgg cgcgcacccc cgagcagacg gaggcggtaa agttctgggg caacaccaat
      181 ttcggcccgt cctggcagac ggcggcgcgc catctctcgg gcgccaagga gctcgggctc
      241 gccgacacgg cgcgcgtgtt cgcactactc aacatgagcc tcgccaacaa ctacgtgctc
      301 aattgggacg ccaaatacca ctacatgttc tggcggcccg tcaccgcgat ccgcaatggc
      361 gacatcgacg gcaacgacgc gaccgagcgt gatcccggct ggacgccgct gaacatgacg
      421 ccgatgcatc cggaatatcc gtcgcaggcg accatcaacg ccactgttgc ggccgcgatc
      481 ctcgagtcgg tcttcggccc tgtgtccgcc attccgctca cggtgagcga tgccgccgac
      541 gcgaagagga cgcgccactt cgccagcatc gccgacatgg tcgaggagca gaagaacgtg
      601 cgcatctggg gcggcgtcca ctaccgctcc gccatcgaca ccggcgccga gatgggccgc
      661 aaggtggcgg cctacatgat ggataacgcg ctcaagccgg cgccctgatg catttcggcg
      721 cgggaccgct ccggcggtcc cgcccgccgt ctcatgaaag gcggctgcct cagtgcggaa
      781 cgtggccgca ttcgctcaag agccattcct cgaaagcgcg cacgttcggg cgtgcgcgcg
      841 accgtgacgg atagacgatg aaataggcgc tgtcggtcgc aaccgtggtg ctgaagggac
      901 gcaccagtcg cccgaccttg aggtcgtcgg cgacgagggc gacctgcgca agcgcgatgc
      961 cgagcttgtc gatggccgcc tggtaggcga ggctcgaatt ctcgaacttg aggccgctgt
     1021 taccgtcgat cccgttgacg ccggcagccg ccagccagag cggccagtcg agcggccggt
     1081 gcagtgagca gagcagggtg cagcctctga ggtccgaagg ttccgatagc gccgaggacg
     1141 ccgccatgaa ttcagggctg cagaccggcg tgagggtctc cccgaagagg cgcttgctga
     1201 tcaggccggc cggcggctgc acgccggaat agatcgccac gtcggtgtcc tcgcggatga
     1261 agtcgaccgt gcggtgcgag gtggtgatct gcacgtcgag ctcgggctcg gcgccgtgca
     1321 gcttcgccag cctcgggatc agccagcgga tcgcgaaggt cggcgggagc ttgatgcgca
     1381 gcgtcctcgc cgcgctgccg ccgcacacgc gattgacgcc gtcctcgatc aggtcgaagg
     1441 cctcgcgcag cgagcggaag agcaattcgc ccttcggcgt cagctcgatg gagcggtggt
     1501 agcgcaggaa gagcttggcg ccgaggctcg attcgagcat ggcgacgtga tggctgagcg
     1561 caccctgggt gacgcacagc tccttggcgg ccttcgagaa gctcaggtgg cgcgcggtcg
     1621 cctcgaaggc gcgcatggcc ttcaggtaat cgagccgatg cacccgctcc aggggcgatc
     1681 cgtcaggcgc gggcatggag gcgccggtcc agggcgagca ggaggctgct gccgatcgcc
     1741 gcgacggtcg tcacgatcac ggcgatcgcc atgatcaggt cgacgttgtg cagaccgatc
     1801 gcccgcatca gaaggttgcc gaggccgcgc tgcgaggcga acatctcgcc cagcagcgtg
     1861 ccgaccagcg tcagcgagaa gccgatgcgc agccctgaga cgatctcggg caaggccgcg
     1921 gggatcagca ccttccacgc catctgccag ggagaatatt gcaggacctg tcccgtcttg
     1981 atcaggacgg gccggatgtt gcgcacggcg ttgatcgtga acagagcgat cgggatgatg
     2041 ccgtggatgg cgccgaaggc gacctttgcc gacatgccga gcccgaaggc gagcagcagg
     2101 atcggataaa gcgtcagctt ggggatcgaa tagagggcca ccagcatggg ctcgaagacc
     2161 tgcccggcga gccgcccgaa gccgaggacg agcccggtcg ttaggccaat cgagacggcg
     2221 cacagcaccg ccagcgtgca ggcgatgaag gtctcgtaaa aatccggcca gaagcgttcg
     2281 gacgagatga actgcagcgt gaagcggaag gtctgcaggg gtgagc
//
LOCUS       DATAIQ010000146         2384 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_423354, whole genome shotgun sequence.
ACCESSION   DATAIQ010000146 DATAIQ010000000
VERSION     DATAIQ010000146.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2384)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2384)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2384
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_423354"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..832)
                     /locus_tag="VHN20_02565"
     CDS             complement(<1..832)
                     /locus_tag="VHN20_02565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019198037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HEX2724683.1"
                     /translation="MAEDTRTDKEPAVISTEALRKAESYVEAEEGATNRLFGWSGRIA
                     TAIAVLMSLFHLYAAYFIVPTQELRYTHVAFVLLLSFLLFPVAARFRNRIRWWDVIPG
                     LLAVATIGYALWGGEDFTDRATVPLRMDVIVGVVFIVLLLEATRRTTGPIMPIVAILF
                     IIYAMTGPYLPPPWTHRGYDLFRLVGHLFITLEGIFGVAVDVSSTLIILFTIYGAFLQ
                     HSGAGKFFIDFSLALMGGKPNSAGRTVVLSSFLLGGPSGSGVATTVMIGTVAYPMMAK
                     A"
     gene            complement(866..1981)
                     /locus_tag="VHN20_02570"
     CDS             complement(866..1981)
                     /locus_tag="VHN20_02570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012592727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEX2724684.1"
                     /translation="METVDTVVIGAGVVGLAAARSLALAGREVLVLEAADGIGTETSS
                     RNSEVIHAGIYYPKGSLKASLCVAGKEALYAYCAERGITARPLGKLIVAIDAEQTVTL
                     ASIRAAAAANGVTDLRWIDAPELERLEPSVRGVAALLSPSSGIIDSHALMLSLQGDLE
                     NNGGMVVLTSPLGGGEVTEDGIRLWVGGAEPIELLARRVVNAAGLWATAIAERLDGFP
                     KNRIPPAYFARGVYFGLAGLRPPFRRLIYPIPEPGGLGIHATIDLGGQVRFGPDVEWI
                     ERPSYEVDPGRATRFYAAIRTYWPGLPDGALEPAYAGVRPKVTGPGEPAGDFIIQGPR
                     QHRCRGLVNLFGIESPGLTASLAIGDYVAALLQDEPA"
     gene            2128..>2384
                     /locus_tag="VHN20_02575"
     CDS             2128..>2384
                     /locus_tag="VHN20_02575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA];
                     GO_process: GO:0016051 - carbohydrate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucan biosynthesis protein"
                     /protein_id="HEX2724685.1"
                     /translation="MTGAIATGAFAAGFSSAFSGDGLKLGPGFAFSFDRVKERARDLA
                     RAPYLPPQRAAAEVLDQIDYDAHGKIRFRTDLALWADGPSA"
BASE COUNT          422 a          789 c          794 g          379 t
ORIGIN      
        1 cggctttcgc catcatcggg taggcgacgg tgccgatcat caccgtggtc gctacgccag
       61 atcctgacgg cccgccgagc aggaacgacg acaggacgac ggtgcggccg gcgctgttcg
      121 gcttgccgcc catcagggcc agcgagaaat cgatgaagaa ctttcccgcg ccggaatgct
      181 gcaggaaggc gccgtagatc gtgaacagga tgatcagcgt cgaggagaca tcgacggcca
      241 ccccgaagat tccttcgagg gtgatgaaga ggtgcccgac gaggcggaag agatcatatc
      301 cgcgatgggt ccatggcggc ggcagatacg ggccggtcat cgcgtagatg atgaacagga
      361 tcgcgacaat cggcatgatc gggccggtcg tgcgccgcgt cgcctcgagc agaaggacaa
      421 tgaagacgac gcccacgatc acgtccatgc gcagcggcac ggtggcgcga tcggtgaagt
      481 cttcgccgcc ccacagcgcg tagccgatgg tggcgacggc gagaaggccg gggatcacgt
      541 cccaccagcg gatacggttg cggaagcgcg ccgcgaccgg gaacagaagg aagctcagca
      601 gcaggacgaa cgcgacgtgc gtgtagcgca gctcctgcgt cggcacgatg aaatacgcgg
      661 catagagatg gaaaagactc atcaggacgg cgatcgcggt cgcgatccgg cctgaccagc
      721 cgaacagccg gttcgtcgcg ccctcttccg cctcgacata ggattcggct ttgcgcaaag
      781 cttccgtcga gatgacggcc ggctccttgt cggttctcgt atcctccgcc aagcgcttcc
      841 tcccgttatt ttccgttgtt gtgttttacg ccggctcatc ctgcaacagg gcggcgacgt
      901 agtcaccgat ggcgagcgac gccgtgaggc ccggggattc gatgccgaac agattgacca
      961 gtccccggca cctgtgctgc cgcggcccct ggatgatgaa gtcgccggcc ggctcgccgg
     1021 ggccggtcac cttcggccgc acgcctgcat aggcgggctc gagggcgccg tccggaaggc
     1081 ccggccagta ggtgcggatc gccgcgtaga accgcgtggc gcggcccggg tcgacctcgt
     1141 agctcggccg ctcgatccat tcgacatcgg gaccaaaacg gacctgcccg ccgagatcga
     1201 tggtggcgtg gatgccgaga ccaccgggtt ccgggatcgg atagatcagc cgccggaagg
     1261 gcgggcgcag gcccgccagg ccgaaataga cgccgcgcgc gaaataggcg ggcggaatgc
     1321 ggtttttcgg aaagccgtcg aggcgctccg cgattgccgt cgcccacagg cccgcggcgt
     1381 tgacgacgcg gcgcgccagg agctcgatcg gctcggctcc accgacccag agccggatcc
     1441 cgtcctccgt gacctcgccg ccgccgagcg ggctcgtgag cacgaccatg ccgccgttgt
     1501 tctcgagatc gccttgcagg gagagcatca gggcgtggct gtcgatgatg cccgagcttg
     1561 gcgacaggag ggctgccacg ccgcgcacgc tcggctccag acgctcgagt tcgggggcgt
     1621 cgatccaccg caggtcggtc accccgttcg cagcggccgc ggcccggatc gaggccagcg
     1681 taactgtctg ctccgcgtcg atcgcgacga tcagcttgcc gagcggccgg gcagtgatgc
     1741 cgcgctcggc gcaataggcg taaagggcct ctttgccggc cacgcacagg gacgccttga
     1801 ggctcccctt cgggtaatag atccccgcat ggatcacttc cgagttgcgc gagctggtct
     1861 cggtgccgat cccgtcggcc gcctccagca ccaggacctc gcgtcccgcg agggccaggc
     1921 tgcgagcggc cgcaagcccc accaccccgg cgccgatgac gacggtgtca actgtttcca
     1981 caggcgtttt ccacaacctc agcgaagctt aaacctttaa cctatattga aagggccaaa
     2041 ggtgtgcctt cgcgccgaca tgattgcctt cataagcggc gcacaagata cgtgttgtaa
     2101 tcatccatga tagaccgacg ttcgttgttg accggcgcca tcgccaccgg cgcgttcgcg
     2161 gccggtttca gctccgcgtt cagcggtgac ggcctgaagc tcggccccgg ctttgcgttc
     2221 tcgttcgacc gggtcaagga gcgggcgcgc gaccttgccc gggcgccgta tctcccaccc
     2281 cagcgcgcgg cggccgaggt cctcgaccag atcgactacg acgcccatgg caaaatccgt
     2341 ttccgcaccg acctggccct gtgggccgac gggccgagcg ccta
//
LOCUS       DATAIQ010000147         2394 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_326688, whole genome shotgun sequence.
ACCESSION   DATAIQ010000147 DATAIQ010000000
VERSION     DATAIQ010000147.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2394)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2394)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2394
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_326688"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(154..1170)
                     /locus_tag="VHN20_02580"
     CDS             complement(154..1170)
                     /locus_tag="VHN20_02580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007594965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HEX2724686.1"
                     /translation="MGVVVPFEDKHPEPAGIEGLVGLVSPDMERVNALILSRTGSDVT
                     MIPEVANHLISSGGKRLRPMLTLATGGLAGYRGDGHVKLAASVEFMHTATLLHDDVVD
                     ESDMRRGEVAARIKWGNQASVLVGDFLLGQAFKMMVEVGSLRALEILSSAAAVIAEGE
                     VMQLAAAKNTETNEDEYLAIIRAKTAELFGAACEVGPVIAGRPKAEQAACRSYGINLG
                     IAFQLVDDALDYGGTSAKLGKNVGDDFREGKVTLPVVLSFRRGDEQERDFWRRTLERG
                     EVAERDLEQAILIMRRHRALEDTLERARHYGAIARDALALFPKSPMKQALLDAVDFCI
                     ARAH"
     gene            1281..1502
                     /locus_tag="VHN20_02585"
     CDS             1281..1502
                     /locus_tag="VHN20_02585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012753244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2007 domain-containing protein"
                     /protein_id="HEX2724687.1"
                     /translation="MMEIIRSNDLVLLALVQSLLEQARIPVVVADSHMSSQAIGAFPR
                     RVLVPSDYGRQARRVVSEAGLAAELRDDE"
     gene            1495..2274
                     /locus_tag="VHN20_02590"
     CDS             1495..2274
                     /locus_tag="VHN20_02590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003613337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HEX2724688.1"
                     /translation="MNDAPEPVTHDMLLDGRVRIVQPRRGHRAGTDAVLLAAAVDPHG
                     DETVVDVGAGTGAVGLMIAARARGAGIVLVERDPELAAQCRHNVRLNGFEARARVVEA
                     DILASAGERRRNGLASESASIVVTNPPFLDAGRSRASPDARRAAAHQLPENGLEQWLR
                     ACGDLLKPKGVLALIHRGDQLAECLRHLQRGFGGVVVKAIHPRAGEPAVRIVISARKG
                     SRAPLLIAPPLVLHEGDGRFTADADAIHRGEKLLASDFAST"
BASE COUNT          366 a          822 c          836 g          370 t
ORIGIN      
        1 gggggctcat gaagctcacg gaggcgccgt gctcgacgca gtcgatcagg acctcggcca
       61 aagccggcac cagggacctc gcctcgtcgc cgtcgacggc gcggatctcc gcgaggccgt
      121 ccgctgctcg ggagccagtc accggggagc cggtcagtgc gcgcgggcga tgcagaaatc
      181 gaccgcgtcg agcaaagcct gcttcatcgg gctcttcggg aacagcgcca gcgcgtcacg
      241 cgcgatggcg ccgtaatggc gcgcccgttc cagcgtatcc tcgagcgccc ggtgccggcg
      301 catgatcagg atcgcctgct cgaggtcgcg ctcggcaacc tcgccgcgct cgagcgtgcg
      361 ccgccagaaa tcgcgttcct gctcgtcgcc gcggcggaac gacagcacca ctggcagcgt
      421 caccttgccc tcgcgaaaat cgtcgccaac attcttgccg agcttggcgc tcgtgccgcc
      481 gtaatcaagc gcatcgtcga cgagctggaa ggcgatgccg agattgatgc cgtagctgcg
      541 gcaggcggcc tgctcggcct tgggacggcc ggcgatgacc gggcccacct cgcaggccgc
      601 gccgaacagc tcggcggtct tggcgcggat gatggcgaga tattcgtcct cgttggtctc
      661 ggtgttcttg gcggcggcga gctgcatcac ctcgccctcg gcgatgacgg cggcggcgga
      721 cgacaggatc tcgagggcgc gcaggctgcc gacctcgacc atcatcttga aagcttggcc
      781 gagcaggaag tcgccgacca gcacgctcgc ctggttgccc cacttgatgc gcgccgcgac
      841 ctcgccgcgg cgcatgtcgc tttcgtcgac gacgtcgtcg tgcaggagcg tcgccgtgtg
      901 catgaactcg acgctggcgg ccagcttgac gtgaccgtcg ccgcggtagc cggcgaggcc
      961 cccggtcgcg agggtcagca tcgggcgcag acgcttgccg ccggacgaga tcaggtggtt
     1021 ggccacctcc gggatcatgg tgacgtcgga gccggtgcgc gacaggatca gggcgttgac
     1081 ccgctccatg tcgggcgaca cgagcccgac cagcccctcg attcccgcag gctccggatg
     1141 cttgtcttcg aacggaacga cgacgcccac gctatctccc cgacttgccg gcacggccaa
     1201 acgcgttgat gatcgcggca ccgtggcatg ccgctgcgtg caccgcaacc tgcagcttgc
     1261 cataggaggg tcccggcggg atgatggaga tcatcagaag caacgatctg gtcctgctcg
     1321 ccctggttca gtcgctgctc gagcaggctc gcatcccggt tgtggtggcc gacagccata
     1381 tgagctcgca agcgatcggc gccttcccgc ggcgcgtgct cgtgccgagc gactacgggc
     1441 gccaggcgcg gcgggtcgtg tcggaggccg ggctggctgc cgagttgcgc gacgatgaat
     1501 gacgcgccgg aacccgtaac gcacgacatg ctgctcgacg gacgcgtgcg catcgtgcag
     1561 ccacgacgcg gccatcgcgc cggcacggat gccgtcctcc tggccgcggc cgtcgacccg
     1621 catggcgacg agacggtcgt cgatgtcggc gccggcacgg gtgcggtcgg gctgatgatc
     1681 gcggcgcgtg cgcgaggcgc cgggatcgtg ctggtcgaac gggacccgga gcttgccgcg
     1741 caatgccggc acaacgtgcg cctcaacggc ttcgaggcac gcgcgcgcgt cgtcgaggcc
     1801 gacattcttg catccgccgg cgagcgccgc cgcaacgggc tggcgagcga aagcgcgagc
     1861 atcgtcgtga ccaatccgcc gtttctcgac gcgggacgtt cgcgcgcgtc gccggatgcg
     1921 cggcgcgccg cggcgcatca gctgccggag aacggcctcg agcaatggct tcgcgcgtgc
     1981 ggcgatctgt tgaagccgaa aggcgtgctc gccctgatcc accgcggcga ccagctggcc
     2041 gagtgcctgc gccatcttca gcgcggcttc ggcggtgtcg tggtgaaagc gatccatccg
     2101 cgcgccggcg agccggccgt gcgcatcgtg atcagcgccc gcaaaggcag ccgcgcgccg
     2161 ttgctgatcg cgccgccgct cgtcctgcac gagggcgacg gccgcttcac ggcggatgcc
     2221 gatgcgatcc atcgcggcga aaagctgctc gcgagcgact tcgcttcaac ctgaatcgat
     2281 ggcgcgctgg tgctgttcgg ccgcatcatc ttcctcggcg aagcacgatc cacttcgccg
     2341 gacgatgcgc aaaaagaaac gggcgcccgt gagggcgccc gtcagatgaa actt
//
LOCUS       DATAIQ010000148         1740 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_234566, whole genome shotgun sequence.
ACCESSION   DATAIQ010000148 DATAIQ010000000
VERSION     DATAIQ010000148.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1740)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1740)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1740
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_234566"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(34..711)
                     /locus_tag="VHN20_02595"
     CDS             complement(34..711)
                     /locus_tag="VHN20_02595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724689.1"
                     /translation="MKSRAKAERVDHRRPPIDRMDKEAIDGLLPPEELDRRPGSRLTA
                     GDIKRAAARAKGAMGASKKLDPSLRIARTRAGPPPTDGMKKSRAAPAARRSLDKGSLK
                     ASAAEAPRRVRKSNAEIAEADTSTARRRPAPRPARTTVETRPVPKTRDKRTGGTRQRV
                     PAPGNVVVGKTKRELVTGQPPARKTGVKSQASTGGRKPPKRSARAGRPSGAGRSKGAS
                     GKLYDTV"
     gene            complement(797..1183)
                     /locus_tag="VHN20_02600"
     CDS             complement(797..1183)
                     /locus_tag="VHN20_02600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF202 domain-containing protein"
                     /protein_id="HEX2724690.1"
                     /translation="MPPQERLEDSADRRTELAADRTVLAAERTYASWVQLGLGALASG
                     VGAKKLLEGIVPEWMIISVGTLLVLFSAFCFGAAVWRQLDPGVPPPRPDVRRIPAYLL
                     VIVNAFLALVALAVMMGIWFGKTSGD"
     gene            1359..1565
                     /locus_tag="VHN20_02605"
     CDS             1359..1565
                     /locus_tag="VHN20_02605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002715461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724691.1"
                     /translation="MKHKFSVGQTVRFTHGGYLSVAAREDFKVTRLLPIEGVECEYRI
                     KCAGEPFERVARESQLDRVPRAGR"
BASE COUNT          239 a          592 c          595 g          314 t
ORIGIN      
        1 ccggttggga gagggtgaac gcccgggcgg tcgttacact gtgtcgtaga gttttccgct
       61 cgcgcccttg ctcctgcctg cgccgctcgg ccggccggcg cgggcggacc gtttcggcgg
      121 tttgcgacca ccggtcgagg cctgggactt gacgccggtc ttgcgggccg gcggttggcc
      181 ggtgaccagt tcccgtttgg tcttgccgac gaccacgttg ccgggcgcgg ggacgcgctg
      241 gcgcgtgccg ccggtgcgct tgtccctcgt cttggggacg gggcgcgtct cgaccgtcgt
      301 gcgcgcgggg cgcggagccg gacgccgccg cgcggtcgac gtgtcggctt cggcgatctc
      361 ggcattcgac ttgcgcacgc gtcgcggtgc ctcggcggcc gacgccttga gcgagccttt
      421 gtcgaggctg cggcgcgccg ccggcgcggc gcggctcttt ttcatgccgt ccgtcggcgg
      481 ggggcccgcg cgcgtgcgcg cgatcctgag actgggatcg agcttcttcg acgcgcccat
      541 cgcgcctttc gccctcgcag cggcgcgctt gatatcgccg gccgtcagcc tgctgccggg
      601 ccgccggtcg agttcctcgg ggggaagaag accgtcgatc gcctccttgt ccatgcgatc
      661 gatagggggc ctgcgatggt caacccgttc ggctttcgca cgtgatttca tgttccgcgc
      721 catcattgcc tccgttgcgg ctcgggctgt cgatgtggca acgggcgcga cggtcggcgg
      781 ttccgatgcg cgctccttaa tcgccgctgg tcttgccgaa ccagatgccc atcatcaccg
      841 ccagcgcgac cagcgccagg aaggcgttga cgatgacgag aagatacgcc gggatgcggc
      901 gcacgtcggg ccgcggcggc ggcacccccg gatcgagctg gcgccacacg gcggcgccga
      961 agcagaaggc cgagaacagc accagcagcg tgccgacact gatgatcatc cattccggca
     1021 cgatgccttc gagcagcttc ttggcgccga cgccgctggc cagcgcgccc agcccgagct
     1081 gtacccagga cgcgtaggtg cgctcggccg ccagcaccgt gcggtcggcg gccagctccg
     1141 tgcgccggtc ggcgctgtcc tcgagacgtt cctgcggcgg catccgacct cctttcacgg
     1201 ggcaatcgtt catgccgcac catggtttcc gcaactgccg gaaagggcaa atccccggct
     1261 ggcccgcccc cacgcgacaa ccgagggact gttctgctgt ggcaaatgct ttatgattat
     1321 tttgaggccg ccaatgctcc aggaaggagg gcgctgtgat taagcataaa ttctcagtcg
     1381 gacaaacagt ccgctttact cacggagggt atctaagcgt cgcggcgcgg gaagatttca
     1441 aggtcacacg cctgctgccg atcgagggag tcgaatgcga gtatcgtatt aaatgcgccg
     1501 gcgaaccctt tgagcgggtt gcccgcgaaa gccagctcga ccgcgtcccg cgggccggcc
     1561 gctagcttcg gatcaccgcc ccaataaccc acaggttccg ccgctctcgg ggcttccctg
     1621 ctgcggccgg cccccccata tattggggcg agggacgggt ccctctctga accttcgggg
     1681 aacacgatga ccaatttcgc tacacgccgc cgccgggccc ttgtggggct ggtcgccgtg
//
LOCUS       DATAIQ010000149         5663 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_8264, whole genome shotgun sequence.
ACCESSION   DATAIQ010000149 DATAIQ010000000
VERSION     DATAIQ010000149.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 5663)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5663)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5663
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_8264"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1604)
                     /gene="glgP"
                     /locus_tag="VHN20_02610"
     CDS             complement(<1..1604)
                     /gene="glgP"
                     /locus_tag="VHN20_02610"
                     /EC_number="2.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015950791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004645 - 1,4-alpha-oligoglucan
                     phosphorylase activity [Evidence IEA];
                     GO_process: GO:0005977 - glycogen metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen/starch/alpha-glucan family
                     phosphorylase"
                     /protein_id="HEX2724692.1"
                     /translation="MREAILTKLTYAIGKDPRAAREHDWFAATALAVRDRIVDPWMDS
                     TRATYQHGRKRVYYLSLEFLIGRLLLDCVSNLGLTPAVRAALAELGVDFDALRTVESD
                     AALGNGGLGRLAACFMDSMASLEIPAYGYGIRYDYGLFRQVLNEGWQHELPEEWLAAG
                     NPWEFERPEVVYRIDFGGTVELAPNPDGTLRHIWHPSETVLAAAYDTPVVGWRGRHVN
                     TLRLWSARAADPLKLETFNMGDYVGALAHRMRAEAISRILYPSDVTPAGQELRLRQEF
                     FFTSASLQDLVRRHLDQHGDLKSLPDHAALQLNDTHPAIAVAELMRLLVDEHQVRWEE
                     AWRITTGTLNYTNHTLLPEALERWPVSMMERLLPRHMQLIYLINWLHREQLAEHGPLS
                     EAAIQAVSLIDESQGRYVRMGHLAFLGSHRVNGVSALHTDLMRKTVFRDLHALYPDRI
                     VNKTNGVTFRRWLHQANPLLRDLLVETIGGRVLDDPERLAELEGVAGDAAFQERFAAQ
                     RRTNKEALSAIIRQRLQIDIDPAALF"
     gene            2036..3592
                     /gene="glgA"
                     /locus_tag="VHN20_02615"
     CDS             2036..3592
                     /gene="glgA"
                     /locus_tag="VHN20_02615"
                     /EC_number="2.4.1.21"
                     /inference="COORDINATES: protein motif:HMM:NF001901.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004373 - glycogen (starch) synthase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen synthase GlgA"
                     /protein_id="HEX2724693.1"
                     /translation="MQSSLLDQASWAGRPTRARPSRSAHRLAEESESPPQRILYVTPE
                     IADYVKAGGLGEVSAALPRTLRQEYDARVLIPGYRQVLENQDQMTVVARLPGTRGMPA
                     CEIGQMNAPDGLVIYVVLCPELYDREGSPYGNAAGIDWSDNDVRFARLSLAAAEIAAG
                     VDDLNWKADLLHLNDWPSSLAPAYLAWRGCKVPSVLTIHNLAYQGLFDRDRLPRLGIP
                     ESAFQIEGVEFYGKLSFLKAGIQYASHLTTVSSTYANEITTPEFGCGLDGLLRRRLQE
                     GRLTGILNGIDESWDPRTDPHLQMPFAPDDLQGKKANAGEVRQEFELAVSRGPLFAVV
                     SRLVHQKGVDLAIEATETIVRQGGQIVVTGRGEGRFETELQCLAQRYPGQVGVKIGFE
                     EGTARRMYAGSDFLLMPSRFEPCGLSQMYAQRFGSLPIARETGGLADTIEDGVTGFLF
                     REPSLAALLSAVYRAVDAFGSRPKLNAMRRAAMARTFAWQRSARRYKKVYDRALEATS
                     ASPAATVPLA"
     gene            complement(3632..>5663)
                     /locus_tag="VHN20_02620"
     CDS             complement(3632..>5663)
                     /locus_tag="VHN20_02620"
                     /inference="COORDINATES: protein motif:HMM:NF013720.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX2724694.1"
                     /translation="IMAGFYVAGDGRADPVGVAMALARGARLAGARIIEGVPALGVLK
                     RNGRVAGVRTAFGDIAAEYVVNCAGMWARQLGEQDGVTIPNRAAEHYYLITEPIPDLP
                     PNMPVLEDPSSYGYFRDEVGGMMIGLFEPECAPWHVDRIPDDFAFGEIQPDWERVGPY
                     LEKAMSRVPVSLQVGVRKLFCGPESFTPDLGPIVGEAPELKNYFVAAGLNSIGILTGG
                     GIGRVLARWIVDGLPDVDVTGINIDRFHRYQSNPDYRRQRAMESLGLVYKVHYPTRSP
                     VTARGAKHSAVHDRLAAAGACFRDVSGWEGADWYAPPGNEPRVEKLSWSRQNWFPWWA
                     AEHHAARESVILMDMSFMSKFSVEGRDAGRVLNYISANDVDAESGRITYTQWLNARGL
                     LEADLTVTKLDDARFLVVVTDTMHRHALTWLRRHIGDAHAFASDLTSGYCQLNVQGPR
                     SRELLQSLTSADLSNEAFPFRTAREIDIAYARVLCIRITYVGELGYELFIPAEQAAHV
                     YDRIVAAGLPFGLRHAGLKALASLRMEKGYRDYGHDIDNTDDPFSVGLGFAVDLKKPD
                     FIGREAALARKGAGPMTRRLAQVLVKDPEPLLFHAEVVRRDGRPVGYVRAGSYGHTLG
                     GAVGLAMIEAGEPIDAAYLTNATWQVDIAGKLYPADVSLKPLYDPDMKRVRM"
BASE COUNT          899 a         1890 c         1950 g          924 t
ORIGIN      
        1 tcgaacaagg ccgccggatc gatgtcgatc tgcaggcgct gcctgatgat cgccgaaagc
       61 gcctccttgt tcgtgcggcg ttgcgcggca aagcgctcct ggaaggcggc gtcacccgcc
      121 acgccttcga gctcggcgag cctctccggg tcatcgagca cgcgcccgcc gatcgtctcc
      181 accaagaggt cgcgcagaag cggattggcc tgatgcagcc agcgccggaa ggtgacgccg
      241 ttggtcttgt tgacgatccg gtccggatag agcgcgtgca ggtcgcggaa gaccgtcttg
      301 cgcatcaggt ccgtgtgcag ggccgagacg ccgttgacgc ggtgcgatcc gaggaacgcg
      361 agatggccca tgcgaacgta gcggccttgc gactcgtcga tcagcgacac cgcctggatc
      421 gccgcctcgc tcagcggccc gtgttccgcg agctgctcgc gatgaagcca gttgatcagg
      481 tagatgagtt gcatgtggcg cggcaggagc cgctccatca tcgacaccgg ccagcgctcg
      541 agcgcctccg gcagcaaggt gtggttggtg tagttgagcg tgccggtcgt gatccgccac
      601 gcctcttccc accgaacctg gtgctcgtcg acgagcaggc gcatcagctc ggccacggcg
      661 atcgccggat gcgtgtcgtt gagctgcagg gcggcgtggt cgggcaggga tttgagatcg
      721 ccgtgctggt cgaggtggcg gcgcacgagg tcctgcaggg atgccgaggt gaagaagaac
      781 tcctggcgca gccgcagctc ctggccggcc ggcgtcacgt cgctcggata gaggatgcgc
      841 gagatcgcct cggcgcgcat gcggtgggcg agggcgccca cgtagtcgcc catgttgaag
      901 gtctcgagct tgagcgggtc ggccgcccgc gccgaccaga ggcgcagcgt gttgacgtgc
      961 cggccgcgcc agcccaccac gggcgtgtcg taggcggcgg cgagcacggt ctcgctcggg
     1021 tgccagatgt ggcgcagggt gccgtccgga tttggcgcaa gctcgaccgt gccgccgaaa
     1081 tcgatgcggt agacgacttc cggccgctcg aattcccacg ggttgccggc cgcgagccac
     1141 tcctcgggca gctcgtgctg ccagccctcg ttcagcacct ggcggaacag gccgtaatca
     1201 tagcggatgc cgtagccgta ggcggggatc tcgaggctcg ccatgctgtc catgaaacaa
     1261 gccgcgaggc gaccgaggcc gccgttgccg agcgccgcgt ccgattcgac cgtgcggagc
     1321 gcgtcgaaat caacgccgag ctcggcgagc gcggcgcgga cggcgggcgt cagccccaga
     1381 ttgctgacgc aatcgagcag caggcgtccg atcagaaact cgagcgacag gtaataaacg
     1441 cgcttgcgcc cgtgctggta ggtggcgcgg gtcgaatcca tccaggggtc gacgatgcgg
     1501 tcgcgcactg cgagggccgt ggcggcaaac cagtcgtgct cgcgcgctgc ccgcggatcc
     1561 ttgccgatcg cgtaggtgag cttggtgagg atcgcctcgc gcatggcggc gatctcatcc
     1621 ttcgtcggct tgcgatccgc accgtcggct gcgtcagccg atgcaagctt ggccgccgcc
     1681 ggccctttgc cggtcgggga ttcgagcagg atcgtgtcct gtgcccggcg cgaacgcgtt
     1741 tgaggcccgc tcattggcgt catgcactcc gtcctgtgtt catcatccca aagcgtagct
     1801 tcgtcgggcc gagatcggct cgacaaactg aatggcgcat taactccgtt gcccactcga
     1861 gaaacgaggc ttgccgcgac tgaacgcctc ttcacctatg tgaatgccga aattttgtcc
     1921 ttcctttagc cgaggctcac ggcgggagga actttattgc taggcttcgc gttgggccat
     1981 tgccaacccg gagcgtagca gtccggcata agtcttgctc gcccttagcg tggacatgca
     2041 aagctcttta ctcgatcaag cctcgtgggc tggtaggccc actcgcgcgc ggcccagccg
     2101 ctcggcccat cgccttgcgg aggagagcga atctccaccg cagcgcatct tatatgtcac
     2161 accggaaatt gccgactacg taaaggcggg gggcctcggt gaggtctcgg cggcgctgcc
     2221 gcggaccctg cgacaggaat acgacgctcg cgtcctgatc cccggctacc ggcaggtcct
     2281 ggagaaccag gaccagatga ccgtcgtcgc ccgtctgccc ggcacccggg gcatgccggc
     2341 ctgcgagatc gggcagatga acgccccgga cggcctcgtc atctacgtgg tcctgtgtcc
     2401 cgagctctac gatcgcgagg gctcgcccta tggcaacgcc gctggcatcg actggagcga
     2461 caacgatgtc cgcttcgccc ggctgagcct ggcggcggcc gagatcgcgg ccggcgtcga
     2521 cgacctgaac tggaaggccg acctcctgca tctcaacgac tggccttcgt ccctcgcgcc
     2581 tgcatatctg gcgtggcgcg gctgcaaggt gccgagcgtc ctcaccatcc acaacctggc
     2641 ctatcagggg ctgttcgacc gcgaccggtt gccgcggctc ggcattcccg agagtgcctt
     2701 ccagatcgag ggtgtcgaat tctacggcaa gttgtcgttt ctcaaggcag gcatccaata
     2761 cgccagccac ctgacgacgg ttagctccac ctacgccaac gagattacga cgcccgagtt
     2821 cggctgcggg ctcgacggcc tgctgcggcg gcggctccag gaaggccggc ttacaggcat
     2881 cctcaacggg atcgacgaga gctgggaccc gcgcaccgat ccacacctgc agatgccctt
     2941 cgcgcccgac gacctccagg gcaagaaggc caatgccggc gaggtccgcc aggagttcga
     3001 gctcgcggta tcacgcgggc cgctgttcgc ggtcgtgtcc cgcctcgtgc accagaaggg
     3061 cgtcgacctt gccatcgagg cgaccgagac gatcgtgcgc cagggcggcc agatcgtcgt
     3121 gacgggccgc ggcgagggac gtttcgagac cgagctgcag tgcctcgcgc agcgctatcc
     3181 cggccaggtc ggcgtcaaga tcggcttcga ggaaggcacc gcccggcgca tgtatgcggg
     3241 cagcgatttc ctgctgatgc cgtcgcgctt cgagccgtgc ggcctcagcc agatgtatgc
     3301 gcagcgcttc ggctcgctgc cgatcgcccg cgagaccggg ggcctcgccg acacgatcga
     3361 ggacggcgtc accggcttcc tcttccgcga gccctcgctc gccgcgctgc tcagcgccgt
     3421 ctaccgggcg gtggacgcct tcggctcgcg gccgaagctc aatgccatgc ggcgcgccgc
     3481 catggcccga accttcgcct ggcagcgctc cgcgcgccgc tacaagaagg tctacgaccg
     3541 cgcgctggaa gccaccagcg cgagcccggc cgccacggtg ccgctggcgt aacgctgctc
     3601 gctttatccc gcttgcggga gaagcgggcc atcacatgcg cacgcgcttc atgtccggat
     3661 cgtaaagcgg tttcagcgac acgtccgcgg gatagagctt gccggcaatg tccacctgcc
     3721 acgtggcgtt cgtcaggtat gccgcatcga tcggctcgcc ggcctcgatc atggcgagcc
     3781 cgacggcgcc gccgagggtg tggccgtagg aaccggcgcg cacgtagccg accgggcgcc
     3841 cgtcgcggcg cacgacctcg gcgtggaaga gcaggggctc ggggtccttg accaggacct
     3901 gcgcgaggcg gcgggtcatc ggtccggccc ccttgcgcgc cagcgccgcc tcgcggccga
     3961 tgaagtcggg cttcttcaga tcgaccgcga agccgagacc gaccgagaac ggatcgtcgg
     4021 tgttgtcgat gtcgtggccg tagtcgcggt agcccttctc catgcgcagg ctggcgagcg
     4081 ccttgagccc ggcgtggcgc aagccgaacg gcaggcccgc cgcgacgatg cggtcgtaga
     4141 cgtgcgccgc ctgctcggcc ggaatgaaca gctcgtagcc gagctcgccc acataggtga
     4201 tgcgaatgca caagacgcgc gcgtaggcga tgtcgatctc gcgcgccgtg cggaagggaa
     4261 acgcctcgtt cgacaggtcg gcgctggtga ggctctgcag cagctcgcgc gagcgcggcc
     4321 cctgcacgtt gagctggcag tagcccgacg tgaggtcgct cgcgaaggcg tgcgcatcgc
     4381 cgatgtgccg gcgcagccac gtcagggcgt ggcggtgcat cgtgtcggtg acgacgacca
     4441 ggaagcgcgc gtcgtcgagc ttggtgacgg tgaggtcggc ttcgagcagg ccgcgcgcgt
     4501 tgagccattg ggtataggtg atgcggccgg attccgcgtc cacgtcattg gcggagatgt
     4561 agttgagcac gcgaccggcg tcgcgcccct ccaccgagaa cttgctcatg aacgacatgt
     4621 ccatgaggat cacgctctcg cgcgcggcgt ggtgttccgc ggcccaccac gggaaccagt
     4681 tctggcggct ccaggacagc ttctcgaccc ggggctcgtt gcccggcggg gcgtaccagt
     4741 cggcgccttc ccagccgctc acgtcgcgaa agcaggcgcc cgcggccgcg agccggtcgt
     4801 gcacggccga atgcttggcg ccgcgcgcgg tgacgggcga tcgcgtcgga tagtggacct
     4861 tgtagacgag cccgagcgac tccatggcgc gctggcgccg gtaatcgggg ttcgactgat
     4921 agcgatgaaa gcgatcgatg ttgatgccgg tgacgtcgac atccggcaac ccgtcgacga
     4981 tccaccgcgc gagcacgcgc ccgatgccgc cgccggtcag gatgccgatc gagttgagcc
     5041 cggcggcgac aaaatagttc ttcagctccg gcgcctcgcc gacgatcggg ccgaggtcgg
     5101 gcgtgaagct ctccgggccg cagaacagct tgcgcacgcc gacctgcaac gacaccggca
     5161 cccggctcat ggctttttcc agatacggcc cgacacgctc ccagtcgggc tggatctcgc
     5221 cgaacgcgaa atcatccggg atgcggtcca catgccacgg cgcgcattcg ggctcgaaaa
     5281 gcccgatcat catgccgccg acctcgtcgc ggaaatagcc gtaggaggac gggtcctcga
     5341 ggacgggcat gttcggcggc aggtccggga tgggctcggt gatcaggtaa tagtgttcgg
     5401 ccgcccggtt cgggatggtg acgccgtcct gctcgccgag ctggcgcgcc cacatgccgg
     5461 cgcagttgac gacgtattcg gcggcgatgt cgccgaacgc cgtgcgcacg ccggctacgc
     5521 gtccgttgcg tttgagcacg cccagggccg gcacgccttc gatgatgcgc gccccggcga
     5581 ggcgcgcgcc gcgcgccagc gccatggcaa cgccgaccgg atcggcgcgt ccgtcgccgg
     5641 cgacgtagaa gccggccatg atg
//
LOCUS       DATAIQ010000150         7308 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_49908, whole genome shotgun sequence.
ACCESSION   DATAIQ010000150 DATAIQ010000000
VERSION     DATAIQ010000150.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 7308)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7308)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7308
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_49908"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            88..3336
                     /locus_tag="VHN20_02625"
     CDS             88..3336
                     /locus_tag="VHN20_02625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724695.1"
                     /translation="MAPVPGGGGQVERLHRADQKTWLAETRHGLFRFGETGSQLQAFD
                     GPGIQHVTHLVPLGGELALILSDRDASGWGGAFRADKGSLKIQELNGSEALRFTAVGR
                     LAGGGAVVGTDRGLYRVDSTGLQLQEVSGADTGRVLALEQIDDSAWLVGAAFGAFRLD
                     ARAARAERLGGDTGEVTHLQRLADGGWLIGGEKGLFRADASGRTLTALPWRKPLRVAE
                     FHKLADGGWLVRGDQGLVVVDAQARRLDGIDDDGTPNWRVQHSDERGVLLQNRRLLHA
                     MLPGTKKPEFLSGEPVSDVYAVRAVQDGWLIAARRGLFRVELQRRRVAPLRGPAVGRV
                     LSLHALKDGRWLAVSDTGLFRADQTLQSVEPVPGPALGQVFVTRQLGNGGLLIGAGRG
                     AFRMDAEGKGIAPVPGAPQTEISSLEQLATGSWLAAGRGGVALLDANGDLGAIVPGGP
                     VDRSAVIQPLSDGRALLTTSRGLLATTETLADAQATLDVGRPLASGLWQGGFMVSGSL
                     RHPCAAVAEDLGLFVELAEDDGATAAARVPVKITGHTADAANFSADLGAFGAGRWRAR
                     LVATAAGADVAVGKPATVAVDAAAGQWLRANWPWLLAALAAVQVVAFAVLIGMAHWRA
                     WPLRALRSVWARMLIWPSLIVPHAWPVQRWALAPWFRTERAKAAPQNAFVEMPVRGPD
                     GAELTAAALITRAETGRRVWLQGRSGMGKSTAVAAWCAAYFGDHKRLSKASRRFGFAL
                     VPVPATALALANRDDDPETTIVRLAQAALEGSGTMCDRVLLRAMLRRGRLALAIDGPN
                     QAVRQALAAFARTWPEARFLVASDQAGPTAFEAWRLPAKMGPDTTQNLLQLWLGAYSG
                     SRLTAQLDREDILPHLMTCYDVRLVADLVTDDPGQVLPTDRIKLYRALFARAKAHNTK
                     LQDLAPLKALAWTMTLEGRAEIKADELAWLEGSSREVLFAQGSRVLREIEPGAFAFDH
                     DQLRFLLAAEHLVETRHGVGSLIAALETSPVWDCERGDQEELWRFLAAVLAPEDVTAL
                     WRFSLDDPARVFLQYALHKHGLETKIFPIGMAAALSSRDDSLAALRLRTVEA"
     gene            3447..4775
                     /locus_tag="VHN20_02630"
     CDS             3447..4775
                     /locus_tag="VHN20_02630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724696.1"
                     /translation="MIDRDRVEVSPMQNVSAKLRLAVVALALVGSGSAVWLALEGQKV
                     RMQQAIFAERQARFEILGVEIAALEERLKSRTADLVVMQANLAQVAHQRDAASATLAK
                     AAADRDKAEADRASAISLRSEILTAAEKERATVEQFKANAANARVTYEVALADADSAK
                     RELEQLRTQRSALLTDVTKLQQERSEHQQALAVLTSEFQSVVQQKNVLAAEAERDGKR
                     LEVLRADTEREQDRVAQLRAQMPELKVEAESLRRQSVDLKKEVEDLNRQKPTLQAQAQ
                     VLQKQIDNLQGGVRQRNELIDQTEKRLSENYAKLAEAEIQKTRFETRSKELQDQIKEQ
                     GKRIGDDKREADRIAAELSRLQEQSRNFDPQRKELARLVTLREQNERQLSEVDARVTQ
                     KRGELLQLQEEIKVREEQRQKLSLLPLGDVAVQAKVEAFAGEPVKVMPKQ"
     gene            4791..5861
                     /locus_tag="VHN20_02635"
     CDS             4791..5861
                     /locus_tag="VHN20_02635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724697.1"
                     /translation="MNAVSQWLNGITTTLTQWHGSMDQALLYWPGVVAALSTVLICTT
                     AAFLILDASRRTALVPGWSYLQRSVGHLSAERDASQRVVEALTTERDGVREELESLKK
                     EKLQYEGLRRQREQEQKVLADVTERLSRMAKDRAKVDALLRENEKLRSEQAALTQSVV
                     ALREEQNESQAAVERRRGRLNEMEEQIIKTKATLDGVLNEAAQKKLESDSYQRQSQQF
                     KLALEDAQKMLRDADEKLKAVEQERDRVSGQTRALQGRITQLDTERRDIEEKIVTAQA
                     ARAKLAQENGRLEADRSTLWVEFVALQEKRNAVGGEIAVSEMKVRDLRHQRDALHGEI
                     EMLRRVLKSMDARTEPAAAMHA"
     gene            complement(5889..6668)
                     /locus_tag="VHN20_02640"
     CDS             complement(5889..6668)
                     /locus_tag="VHN20_02640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019195927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX2724698.1"
                     /translation="MDLGINDLRVLVTAGAGGIGLEVARAFVREGAKVHVCDVDQAAL
                     DALGRNDPAITRSLTDVSDRAAVARLLDDVLARLGGLDCLVNNAGIAGPTGRVEAIAP
                     EDWDRTLAINITGHFNCTRLAVPLLQASDNASIVNLSSAAGRFGFPLRTPYAAAKWAV
                     IGFTKSLAMELGEFGIRVNAIQPGVVEGERIRRVFEAKGKERGVSAEEMRARSLAQAS
                     IKEMIQPEQLADMIVFLASPRARTISGQAIAVDGDLQSLLG"
     gene            6762..>7308
                     /locus_tag="VHN20_02645"
     CDS             6762..>7308
                     /locus_tag="VHN20_02645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX2724699.1"
                     /translation="MSISSHVSRRGLLKGAAGTAALAGIGAPAIVGAQADVIRIGHLT
                     PLTGFLGPLGEYAVMGVRLAAEEINAAGGVLGRKIELVMEDSVNPQTASAKAERLIER
                     DKVSMIIGEISSASGLAIGQVANRLQRVFINTGCNSDALRGASCNPYMFHIEGANSMY
                     VMAVGQYLLRENLVKGKKWYTL"
BASE COUNT         1220 a         2433 c         2616 g         1039 t
ORIGIN      
        1 agtaagtatt cgcgagcgcg gcatttcgcg attgctggcg cgtgccttgc tgcgagcgcg
       61 gctccggtct gggctgcggc ggtctgcgtg gcgccggtcc cgggcggcgg cggccaagtc
      121 gagcgcctgc accgcgccga ccagaaaacc tggctcgccg agacgaggca cggccttttc
      181 cggttcggcg aaaccggctc acagctccag gccttcgacg ggccgggcat tcagcacgtc
      241 acccacctcg ttccgctcgg cggcgagctc gccctgatcc tcagcgaccg ggacgcgtcc
      301 ggctggggcg gcgccttccg cgccgacaag ggtagtctca agatccagga gctgaacggc
      361 tccgaggcgc tgcgcttcac ggcggtcggg cggctggccg gcggcggagc cgtcgtcggc
      421 acggatcgtg gcctctatcg cgtcgattcc accggcctgc agctgcagga ggtgtccggc
      481 gccgacacgg gccgcgtcct ggccctcgag cagatcgacg attcggcctg gctcgtcggc
      541 gccgccttcg gggctttccg cctcgatgcc cgcgccgcgc gcgccgagcg ccttggcggc
      601 gacacgggcg aggtgacgca tctccagcgt ctcgccgacg gcggctggct catcggcggc
      661 gagaagggac ttttccgcgc cgacgcgtcc ggccgcacgc ttacggcgtt gccctggcgc
      721 aagccgctcc gggtcgccga gtttcacaag ctggccgacg gcggctggct cgtgcgtggc
      781 gaccagggcc tcgtcgtcgt cgacgcgcag gcgagacgcc tcgacggaat tgatgacgac
      841 ggcacgccga actggcgcgt ccagcacagc gacgagcgtg gcgtcctgtt gcagaaccgg
      901 cgcctgctgc acgccatgtt gccggggacg aagaagccgg aattcctgtc cggcgagccg
      961 gtgagcgacg tctatgcggt gcgcgccgtc caggacggct ggctgatcgc ggcacggcgc
     1021 ggtctgttcc gcgtcgagct gcagcgccgg cgcgtggcgc cgttgcgcgg gccggcggtc
     1081 ggccgcgtcc tctcgctgca cgcgctcaag gacgggcgct ggctggcggt gagcgacacc
     1141 ggcctgttcc gggccgatca gacgctgcaa agcgtcgagc ccgtgcccgg ccccgccttg
     1201 gggcaggtct tcgtcacgcg gcagctcgga aatggcgggc tcctgatcgg cgcggggcgc
     1261 ggcgcgttcc ggatggacgc cgaaggcaag ggcatcgcgc cagttcccgg cgcgccgcag
     1321 accgaaatct cgtcactcga gcagctcgcg accggatcat ggctcgccgc gggacgtggc
     1381 ggcgtcgctt tactggacgc gaacggcgac ctcggcgcca tcgtgccggg cggcccggtg
     1441 gaccggagcg ccgtgatcca gccgctctcg gacggccgcg cgctcctgac gacgtcgcgg
     1501 gggcttcttg ctaccaccga gaccctcgcc gacgcgcagg ccaccctgga cgtcgggcgg
     1561 ccgctcgcat cgggcctatg gcagggcggg ttcatggtca gcggcagcct gcgccacccc
     1621 tgtgccgcgg tggccgaaga cctgggactg ttcgtcgagc tcgcagagga tgacggcgcc
     1681 acggccgcag cccgcgtccc cgtgaagatt accggacaca cggccgacgc ggcgaatttc
     1741 agcgccgatc tcggagcctt tggcgccggg cgctggcgcg cccggctcgt cgctaccgcg
     1801 gcgggggccg atgtggcggt cggaaagccg gccacggtgg cggtcgacgc agctgccggt
     1861 cagtggctgc gtgccaactg gccgtggctg ctggcggccc tcgccgccgt gcaggtggtc
     1921 gccttcgcgg tgctgatcgg catggcgcat tggcgcgcgt ggccgctgcg ggcgctgcgc
     1981 tcggtctggg ccaggatgtt gatctggccg tcgctgatcg tgccccacgc ctggcctgtg
     2041 cagagatggg cgcttgcgcc ctggttcagg acggagcgcg ccaaagctgc gccgcaaaac
     2101 gcgttcgtcg agatgccggt ccgcgggccc gacggggcgg agctgacggc ggcggcgctc
     2161 atcacgcgtg ccgaaaccgg ccggcgcgtg tggctccagg gccgctcggg gatgggcaag
     2221 agcacggcgg tcgcggcgtg gtgcgccgca tatttcggcg atcacaagag gctgtcgaag
     2281 gcgtcccgcc gattcggctt cgcgctcgtt ccggtgccgg cgaccgccct tgcgctggcg
     2341 aaccgcgatg acgacccgga gacgacgatc gtgcgcctgg cgcaggcggc gctcgagggc
     2401 tccggcacga tgtgcgaccg cgtcctgctg cgcgccatgc tgcgccgcgg ccggctcgcc
     2461 cttgccatcg acggcccgaa ccaggccgtc cggcaggccc tggcggcgtt cgcccgcacc
     2521 tggccggaag cgcggttcct cgtggcatca gaccaggccg gacccaccgc attcgaggcg
     2581 tggcggctgc ctgcaaagat gggccccgac accacgcaga acctgctgca gctctggctc
     2641 ggggcgtata gcggctcgcg cctgacagcg cagctcgatc gcgaggacat ccttccgcat
     2701 ctcatgacgt gctacgacgt gcggctcgtc gccgacctcg tcaccgatga ccccggacag
     2761 gtcctgccca ccgatcggat caagctctat cgggcgctgt tcgcgcgcgc caaggcccac
     2821 aacacgaagc tccaagatct ggcaccgctc aaggcgctcg cctggaccat gacgctcgag
     2881 ggccgcgcgg agatcaaggc cgacgagctc gcctggcttg agggcagctc gcgcgaggtg
     2941 ctgttcgcgc agggcagccg cgtcttgcgg gaaatcgaac ccggcgcgtt cgccttcgac
     3001 cacgaccagc ttcgcttcct gctcgccgcc gagcacctcg tggagacccg ccacggcgtg
     3061 ggatcgctga tcgccgcgct ggagaccagc ccggtatggg attgcgagcg cggcgaccag
     3121 gaggagctgt ggcggttcct cgccgctgtc ctggcgccgg aggacgtcac ggcgctctgg
     3181 cgcttctcgc tcgacgaccc ggcccgggta ttcctgcaat acgcgctgca caagcacggt
     3241 ctggagacga agatctttcc gatcggcatg gccgcagcgc tgtcgagccg ggacgactcg
     3301 ctagccgcgt tgcggctgcg cacggtggag gcgtgaggtg gcgccgctgt tgcgcggatc
     3361 acattcgaag aaggcccggc gcgggcatca tgggggcatg aaggggtggc gatgcgtggg
     3421 agtatgcgga cgtttgggag aacgagatga ttgatcgaga cagggtggaa gtctccccga
     3481 tgcagaacgt gagcgccaag ctgcgtctgg cggtggtggc gcttgcgctg gtcggctccg
     3541 gctctgccgt gtggctcgcg ctggaaggac agaaggtgcg catgcagcag gcgatatttg
     3601 ccgagcggca ggcgcggttc gagattctcg gcgtggagat cgcggcgctc gaggagcggc
     3661 tcaagagccg caccgcggat ctggtcgtaa tgcaggccaa ccttgcccag gtcgcccacc
     3721 agcgcgacgc ggcgagcgca acgctggcga aagcggccgc cgaccgcgac aaggcggagg
     3781 ccgaccgggc ctcggcgatt tcgctgcgca gcgaaattct caccgcggcc gaaaaggagc
     3841 gcgcgaccgt tgagcaattc aaggccaatg cggcgaacgc ccgcgtcacc tacgaggtgg
     3901 cgctggccga cgccgactcg gccaagcgcg agctggagca gttgcgcaca caacgcagtg
     3961 ccttgctgac cgacgtcacc aagctgcagc aggagcggag cgagcatcag caggcgctcg
     4021 cggtgctgac ctccgagttc cagtccgtcg tgcagcagaa gaacgtgctc gccgccgagg
     4081 cggagcgcga tggaaaacgc ctggaggtgc tgcgcgccga taccgagcgc gagcaggacc
     4141 gcgtcgcgca gttgcgcgcg cagatgcccg agctcaaggt cgaagccgag agcctccgcc
     4201 gccagtccgt tgacctcaag aaggaggtcg aggacctgaa ccggcagaag ccgacgctgc
     4261 aggcgcaggc gcaagtgctg cagaagcaga tcgacaacct gcagggcggc gtgcgccagc
     4321 gcaacgagct gatcgaccag accgaaaaac gtctttcgga aaactacgcc aagctcgccg
     4381 aggccgagat ccagaagacc cggttcgaga cgcgcagcaa ggagctgcag gaccagatca
     4441 aggaacaggg caagcgcatc ggcgacgaca agcgcgaggc cgaccggatc gccgcggaac
     4501 tgagccgcct gcaggagcag agccgcaact tcgacccgca gcgcaaggag ctggcgcggc
     4561 tggtcacgtt gcgcgagcag aatgagcgcc agctcagcga ggtcgatgcc cgcgtcacgc
     4621 agaagcgcgg cgagctcctg cagctgcagg aggaaatcaa ggtgcgcgag gagcaaaggc
     4681 agaagctgtc gctgctgccc ctcggcgacg tggccgttca ggcgaaggtg gaggcctttg
     4741 ccggcgagcc cgtcaaggtc atgcccaaac agtaacgagt ggggccgaac atgaatgctg
     4801 tttcccaatg gttgaatgga attacgacga cgctgacgca atggcacggc agcatggacc
     4861 aggcgctgct ctattggccc ggcgtcgtcg cggcgctctc gacggtgctg atctgcacga
     4921 cggccgcctt cctgatcctc gacgcgtcac ggcggactgc cctggttccg ggctggagct
     4981 acctgcagag gagcgtcggc catctttccg cggagcgtga cgccagccag cgtgtcgtcg
     5041 aagcgctcac tacggaacgc gacggcgtgc gtgaagagct ggagagcctc aagaaggaga
     5101 agttgcagta cgaagggctc cgccggcaac gcgagcagga gcagaaagtc ctcgccgacg
     5161 tgaccgagcg cctgagccgc atggccaagg accgcgccaa ggtcgacgcg ctgctcaggg
     5221 agaacgagaa gctgcgctcg gaacaggcgg cgctgaccca gtcggtggtc gccttgcgcg
     5281 aagagcagaa tgagagccag gcggcggtcg agcgccggcg cggccggctc aacgagatgg
     5341 aagagcagat catcaagacc aaggcgacgc tcgacggcgt cctgaacgag gcggcgcaga
     5401 agaagctcga aagcgacagc taccagcgcc agtcgcagca gttcaagctc gccctcgagg
     5461 acgcccagaa aatgctgcgg gatgccgacg agaagctcaa ggcagtcgag caggagcgcg
     5521 accgggtgag cggccagacg cgcgcgctgc agggccgcat cacccagctc gacacggaac
     5581 ggcgcgacat cgaggagaag atcgtcaccg cccaggcggc gcgggcgaag ctggcccagg
     5641 agaacggccg cctcgaggcc gaccgcagca ccctgtgggt ggagttcgtc gccctgcagg
     5701 agaagcgcaa cgcggtcggc ggcgagatcg ccgtcagcga gatgaaggtg cgcgacctgc
     5761 gccaccagcg tgacgcgctg cacggcgaga tcgagatgct gcgccgcgtg ctcaagagca
     5821 tggacgcgcg caccgagccc gccgccgcca tgcacgcgta aaacccctcc ccgcgagggg
     5881 aggggttact accccaacag tgactgcagg tcgccgtcga cggcgatcgc ctggcccgag
     5941 atggtacggg cgcgcggcga ggccaggaag acgatcatgt cggcgagctg ttccggctgg
     6001 atcatctcct tgatcgaagc ctgggcgaga gagcgtgccc gcatctcctc cgccgagacg
     6061 ccgcgttcct tgcccttggc ctcgaacacg cggcggatgc gctcgccctc gacgacgccc
     6121 ggctggatgg cgttgacgcg gataccgaac tcgccgagct ccatggccag ggacttggtg
     6181 aacccgatca ccgcccattt ggctgccgcg taaggtgtgc gcaggggaaa gccgaaccgc
     6241 ccggccgccg acgacaggtt gacgatgctc gcattgtcgc tcgcctgcag gagcggcacc
     6301 gcgaggcgcg tgcagttgaa atggccggtg atgttgatgg cgagcgtgcg gtcccaatcc
     6361 tcaggcgcga tcgcctcgac ccgccctgtc ggcccggcga tgccggcatt gttgacgagg
     6421 caatcgagcc cgccgaggcg ggcgagaacg tcgtcgagca gccgcgccac cgccgcccgg
     6481 tcggacacgt cggtgaggct gcgggtaatg gccgggtcat tgcgcccaag cgcgtcgagg
     6541 gcggcttggt cgacatcgca gacatgcacc ttcgcccctt cgcgaacgaa ggcgcgcgcc
     6601 acttcgagcc cgatgccccc ggctccggcg gtcaccagca cgcgcaagtc gttgatcccg
     6661 agatccatgc ctcgacaaag ctccggtttt gcgcaagcgt aaccgtgcat cacggatcac
     6721 ggcaagccaa acaagccgtg gcgattgcag aggaaacgcc aatgagtatc tcaagccatg
     6781 tctcccgccg cgggctgctc aagggagcgg ccggaacggc cgccctggcg ggcatcggtg
     6841 ccccggccat cgtcggcgcc caggccgatg tcatccgcat cggccatctg acgccgctga
     6901 cgggctttct cgggccgctc ggtgaatacg ccgtcatggg cgttcggctc gcggcggagg
     6961 agatcaacgc cgccggcggc gtgctcggcc gcaagatcga gctggtgatg gaggactcgg
     7021 tcaatccgca gaccgcgtcc gccaaggcgg agcggctgat cgagcgcgac aaggtgtcga
     7081 tgatcatcgg cgagatctcg tcagcctccg gcctcgccat cggccaggtc gccaaccgtc
     7141 tgcagcgcgt gttcatcaat accggctgca attccgacgc gctgcgcggc gccagctgca
     7201 atccatacat gttccacatc gagggtgcga actcgatgta cgtgatggcg gtcgggcaat
     7261 atctgctgcg cgagaacctg gtgaagggca agaagtggta caccctca
//
LOCUS       DATAIQ010000151         1605 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_285515, whole genome shotgun sequence.
ACCESSION   DATAIQ010000151 DATAIQ010000000
VERSION     DATAIQ010000151.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1605)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1605)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1605
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_285515"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            437..718
                     /locus_tag="VHN20_02650"
     CDS             437..718
                     /locus_tag="VHN20_02650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015952345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase assembly factor 2"
                     /protein_id="HEX2724700.1"
                     /translation="MSGSTMTSAALDARRRKILFRAWHRGIREMDLLMGRFADAALAG
                     MSDAELDEFEQLIDVPDHELVRWIMGDDEPRSDCNTAVFKRLKAFHHDQ"
     gene            715..>1605
                     /locus_tag="VHN20_02655"
     CDS             715..>1605
                     /locus_tag="VHN20_02655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018043708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HEX2724701.1"
                     /translation="MTTLTRALDALKRDKRLTLASVPDGFDALAVADLTRGLSAAEGP
                     AALVHVARDGQRQQVLENALRFIAPEIEVLTFPAWDCQPYDRVSPNAAVTAQRMTTLA
                     RLARSGSSEERPRLLSTTVNAIVQRVPPRARIAAETFSAAPGNMVNMEALVAWLEVNG
                     FLRTGTVRETGEYAVRGGILDLYAPGLAGPVRLDFFGDTLESIRSFDPETQRTIGQLR
                     ALDLVPISEVQLTTETIRRFRQGYVAAFGAPTRDDRLYEAVSEGRRYPGLEHWLPLIH
                     DRLDTLLDYADGVPVVFDALV"
BASE COUNT          278 a          541 c          537 g          249 t
ORIGIN      
        1 ggaacaggag atcgacgagc cgcgccggac gccccggttc gccgagcaga cgatcgagaa
       61 gaggcgcgat cttgggcccg acgccgggaa gcgtcgtcac cgcggcaaaa aaggggtcga
      121 ggcgggaagg gcggagggac atcaggcgat cggggtggca acggctggcg cgctcgctat
      181 atagcggttt cgcggccgtg aacgcgacac aaagcccgaa gccgatccct ccatgcgggt
      241 cggcgtcggg cgtgtcggag catgatcggg caacgtgggc accactgcgc cgagacgatc
      301 atgcgagtcg gcaagaaaga aagcgggagc gattgaaatg atcccgcctg acaccgcatt
      361 ttgttcggcg gaccggaact gcccgggatt gaggtcccgg gctccgccgg aaaatgctct
      421 gggatggagt ggccgcatga gcggctcgac gatgacaagc gccgcgctcg acgcgcgacg
      481 ccgaaagatc ctgttccgcg cctggcacag gggcattcgc gagatggacc ttctgatggg
      541 ccgtttcgcg gacgcggcgc tggccgggat gtcagacgcg gagctcgacg agttcgagca
      601 gctgatcgat gtccccgacc acgagctggt gcgctggatc atgggagatg atgagccgcg
      661 ttccgattgc aacaccgccg tattcaagcg cctgaaagcg tttcaccacg accaatgacc
      721 actctcaccc gcgccctcga cgccctcaaa cgcgacaaga ggctgacgct cgcaagcgtc
      781 ccggacggtt tcgacgcact cgccgtggcc gacctgacgc gcggcctgag cgctgccgaa
      841 ggccccgccg ccctggtgca cgtggcgcgc gacggccaac gccagcaagt cctcgaaaat
      901 gcgctccgct tcatcgcgcc cgaaatcgag gtgctgacct tcccggcctg ggattgccag
      961 ccctacgacc gcgtgtcgcc caatgctgcc gtgaccgcgc aacgcatgac gacgctggcg
     1021 cggctggcgc gctccggcag ctcggaggag cgtccgcgcc tgctctcgac gaccgtcaac
     1081 gccatcgttc agcgcgtgcc gccgcgcgct cgcatcgccg ccgaaacctt ctcggccgcg
     1141 cccggcaaca tggtcaacat ggaagcgctg gtcgcgtggc tggaagtgaa cggcttcctg
     1201 cgcaccggca cggtccgcga gacgggggaa tacgccgtgc gcggtggcat tctcgacctc
     1261 tacgcgccgg gtctcgccgg gccggtccgt ctcgacttct tcggcgacac cctggaatcg
     1321 atccgctcct tcgatcccga gacgcagagg accatcggcc agctgcgcgc cctcgatctc
     1381 gttccgatca gcgaggtgca gctgacgacg gaaacgatcc gccgtttccg tcagggctac
     1441 gtggcggcgt tcggcgctcc cacgcgcgac gaccggcttt acgaggcggt gagcgagggg
     1501 cgccgctatc ccggcctcga gcattggctg ccgctcatcc atgaccgtct cgacaccctg
     1561 cttgactatg ccgatggcgt tccggtcgtc ttcgatgcgc tcgtc
//
LOCUS       DATAIQ010000152         3368 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_49924, whole genome shotgun sequence.
ACCESSION   DATAIQ010000152 DATAIQ010000000
VERSION     DATAIQ010000152.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3368)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3368)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3368
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_49924"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(255..2084)
                     /gene="recQ"
                     /locus_tag="VHN20_02660"
     CDS             complement(255..2084)
                     /gene="recQ"
                     /locus_tag="VHN20_02660"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012330010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase RecQ"
                     /protein_id="HEX2724702.1"
                     /translation="MSERLQRARAALKSVFGYDDFRPGQDEIIAAVLAGEDVLAVMPT
                     GSGKSMCYQLPALVDETLTVVVSPLIALMRDQVRQMVAFGVPAATLNSMATEEEALEA
                     WRLLRSGELRLLFVSPERLMADGLTARLKELGAHRLAIDEAHCVSQWGHDFRPEYREI
                     ARVRAALGDVQTIALTATADQATRADIVERLFPKPPRVFLHSFDRPNISLRFAAKDQP
                     KRQLSNFLAGYKDESGIVYCSSRKRTETLATYFKEHGFRALPYHAGLDQRVRTRHQDV
                     FLQEDGVVMVATVAFGMGINKPDVRFVCHADMPANVEGYYQEIGRAGRDGLPADTLTL
                     YGLDDMALRRRQIAEKEVSDERRRIEQKKLDAMIGLCETPSCRRQALLAYFGEASGPC
                     GHCDVCAGKVATYDATVDAQKALSAIARTGQRFGAGYIADVLGGRETDAIRRNGHHNI
                     KTFGVGRDRSQRVWRSLIRQLFAAGAIDETGGEYPGLRLTGKGEAILFGRETVALRPE
                     TDRRPREKRPERTAAAGAFGELDARGQELFHHLRALRGAIARDEGVAAYMIFPDRTLI
                     EMASLRPVDLAALRLIHGVGERKLKDYGALFVKAIGEFLGGAA"
     gene            complement(2113..2490)
                     /locus_tag="VHN20_02665"
     CDS             complement(2113..2490)
                     /locus_tag="VHN20_02665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724703.1"
                     /translation="MQQTLWILAGLFDLAFAAFHVAFWRMFDWPRRLSASGAINAAIT
                     QTLNIVLIFVFLAYGLALIAASGAQARATAWLPAAGAGLWALRTLLQPLLFPMRHAAS
                     IAITFVFMVGAVLHGAAALWSLR"
     gene            complement(2522..>3368)
                     /locus_tag="VHN20_02670"
     CDS             complement(2522..>3368)
                     /locus_tag="VHN20_02670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012634294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX2724704.1"
                     /translation="LCRIDGIGVTSPAAFAEHVRVIWLTPDLDGLFRGSAGERRRFLD
                     RFVLAVDAEHGTRVNALERTLRSRNRVLEESPDDTLWLDALEREVAEIGIAVAAARRE
                     TVERLAGLILATRDDVSPFPFAALALHGDIDELVATLPAVDAEDRYRAMLRDGRRRDR
                     AAGRTLVGPQASDLLVRHGPKDMPAGSCSTGEQKALLVGLVLAHARLVAAMSGIQPLV
                     LLDEIAAHLDPRRRGALFDELAAGGGQVWMTGADPALFAELDGRADLMHVSAGRVERS
                     SPGHM"
BASE COUNT          567 a         1139 c         1186 g          476 t
ORIGIN      
        1 tggcccccgg ggtcatggac ggtgagcatg ataacgagtt ccacaaggcc ccagacgagg
       61 tagtcgatcg ccagcgctgc tagccgccgc caaaaccgcc tatctgaaag tcggcgacca
      121 ccacgttgga catggcgccc cccgtcgttc gtttttcgcc tggattgtaa gttgaacctc
      181 ttccgagggg tgcgcaagcg tcgcgccgcg cgcgtcactc cggggcggcg cgatgctcga
      241 cggataaggg agtatcaggc tgcgccgccc agaaactcgc cgatggcctt cacgaacagg
      301 gcgccgtaat cctttagctt gcgctcgccg acgccgtgga tcaggcgcag ggcggcgagg
      361 tcgacggggc gcagactcgc catctcgatc agggtgcggt cgggaaagat catgtaggcg
      421 gcgacgccct cgtcgcgggc gatggcgccg cgcagggcgc gcaggtgatg gaacagctcc
      481 tggcccctgg catcgagctc gccgaaagcg ccggcagcgg cagtgcgttc gggccgtttt
      541 tcgcgcgggc gccggtccgt ctccggacgg agcgccacgg tctcgcggcc gaacaggatg
      601 gcctcgccct tgccggtcag gcgcaggccc ggatactcgc ccccggtctc gtcgatggcc
      661 ccggcggcga acagctgacg gatcagggac cgccacaccc gctgcgagcg gtcgcgaccg
      721 accccgaacg tcttgatgtt gtggtggccg ttgcgacgga tggcgtcggt ctcgcggccg
      781 ccgagcacgt cggcgatata gcccgccccg aagcgctggc cggtgcgcgc gatggccgag
      841 agcgccttct gagcgtcgac cgtggcgtca taggtggcga ccttgccggc gcacacgtcg
      901 cagtggccgc acgggccgct cgcctcgccg aaataggcga gcagcgcctg gcggcggcag
      961 gacggcgtct cgcacaagcc gatcatggcg tcgagcttct tctgctcgat gcggcggcgc
     1021 tcgtccgaca cctccttttc ggcgatctgg cgccggcgca gcgccatgtc gtcgagacca
     1081 tagagggtca acgtgtcggc gggcaggccg tcgcgcccgg cgcgcccgat ctcctggtaa
     1141 tagccctcga cattggcggg catgtcggcg tggcagacga agcgcacgtc gggcttgttg
     1201 atgcccatgc cgaaggcgac ggtcgcgacc atcacgaccc cgtcctcctg caggaaaacg
     1261 tcctgatggc gcgtgcgcac gcgctgatcg agcccggcat gatacggcag ggcgcggaac
     1321 ccgtgctcct tgaagtaggt ggcgagggtc tcggtgcgct tccgcgagga gcaatagacg
     1381 atgccgctct catccttgta gccggccaga aaattgctga gctggcgctt cggctggtcc
     1441 ttggcggcaa agcgcaggct gatattgggc cggtcgaagc tgtgcaggaa gacgcgcggc
     1501 ggcttcggaa acaggcgctc gacgatgtcg gcccgcgtcg cctgatcggc ggttgcggtg
     1561 agggcgatgg tctgcacgtc gccgagggcg gcgcgcacgc gcgcgatctc ccggtattcg
     1621 ggccggaagt cgtggcccca ttgcgagacg caatgcgctt cgtcgatggc gaggcggtgt
     1681 gcgccgagct ccttgagacg cgccgtgagc ccgtcggcca tcaggcgttc gggcgacacg
     1741 aacagcagcc gcagctcacc gcttcgcagc aggcgccacg cctcgagggc ctcctcctcg
     1801 gtggccatcg agttgagggt cgcagccggc acgccgaacg ccaccatctg ccgcacctgg
     1861 tcgcgcatca gcgcgatcag cggcgacacg acgacggtga gcgtctcgtc gacgagcgcg
     1921 ggcagctggt agcacatcga cttgccgctg cccgtcggca tcacggcgag cacgtcctcg
     1981 ccggcaagga cagccgcgat gatctcgtcc tgaccgggac ggaaatcgtc gtagccgaaa
     2041 acggacttga gcgccgcgcg cgcccgctga aggcgctcgc tcaccaagcc gggcccccga
     2101 cgggcacgag catcatcgca acgaccatag ggcggcagca ccgtgcagaa ccgcgccgac
     2161 cataaagacg aaggtgatcg cgatcgacgc ggcatgacgc atcggaaaga gcagcggctg
     2221 aagcaacgtc cgcaatgccc acaagccggc gccggcagcc ggcagccagg cggtggcgcg
     2281 cgcttgagca ccactcgccg cgatcagcgc caggccgtaa gcgaggaaca cgaaaatcag
     2341 tacgatgttg agcgtctgcg tgatggccgc attgatcgca cccgacgccg aaaggcgtcg
     2401 gggccaatcg aacattcgcc agaacgccac atgaaacgca gcgaaggcga ggtcgaacag
     2461 cccggccagg atccagagcg tctgctgcaa gctcgacgtg ccctcagctg caggcatcgc
     2521 gtcacatgtg ccccggggag cttcgctcga cgcgccccgc gctcacgtgc atcaggtcgg
     2581 cgcgcccatc gagttcggcg aacaacgccg gatcggcgcc ggtcatccag acctgcccgc
     2641 cgccggcggc aagctcgtcg aacagggcgc cgcgccggcg cggatcgaga tgcgcggcaa
     2701 tttcgtcgag cagcaccagg ggctggatgc cgctcatggc cgcgacgagg cgcgcatggg
     2761 caagcacgag gccgaccagc aaggccttct gctcgcccgt cgagcagctc ccggccggca
     2821 tgtccttcgg gccgtggcgg acgagcaggt cggaggcttg cggtccgacg agcgtgcgtc
     2881 cagcggcgcg atcgcggcga cggccatcgc gcagcatggc acggtagcga tcctccgcgt
     2941 cgacggcggg aagcgtcgcg acgagctcgt cgatgtcgcc atgcagagcg agcgccgcga
     3001 atgggaacgg ggacacgtca tcgcgggtgg ccaggatcag cccggccagg cgctcgacgg
     3061 tctcgcgccg cgccgccgcc accgcgatgc cgatttccgc cacctcgcgc tcgagcgcat
     3121 cgagccacag cgtatcgtcg gggctttcct cgagaacgcg gttgcgcgag cgcagcgtcc
     3181 gctcgagggc attgacgcgg gtgccgtgct ccgcgtcgac ggcaagcacg aagcggtcga
     3241 gaaaacgccg gcgctcgccg gccgagccgc ggaagagccc gtcaaggtcg ggggtcagcc
     3301 agatcacccg cacgtgctct gcgaaagcgg ccggcgaggt cacgccgatg ccgtcgatgc
     3361 ggcacaag
//
LOCUS       DATAIQ010000153         6409 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_188381, whole genome shotgun sequence.
ACCESSION   DATAIQ010000153 DATAIQ010000000
VERSION     DATAIQ010000153.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 6409)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6409)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6409
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_188381"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..644
                     /locus_tag="VHN20_02675"
     CDS             <1..644
                     /locus_tag="VHN20_02675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011976072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HEX2724705.1"
                     /translation="VMPLSILTIVVLGVILFGVTTATESAAVGAAGAFLLALHARTLN
                     WKRTKEAVFLTAKTTAMVCWLFVGSALFSAVFAILGGQALLERWVLSMDLTPVQFMIL
                     SQALIFVLGWPLEWTEIIIIFVPIFLPLLKHFSIDPVLWGVLVFVNLQAAFLSPPVAM
                     SAFYLKGVSPPHVTLNQIFAGMMPYMLIVILCMVIMYLWPGLTLWLPKYLYGG"
     gene            755..1384
                     /locus_tag="VHN20_02680"
     CDS             755..1384
                     /locus_tag="VHN20_02680"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012320372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008198 - ferrous iron binding [Evidence
                     IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2OG-Fe(II) oxygenase"
                     /protein_id="HEX2724706.1"
                     /translation="MSFSTLNVDAVRQAPVSREPYTWFLGSGILRQDVIDDLRHDFPN
                     ITKPGGLTVEEVDLKGRFKTLIDELESDEFSAELSKKFGLDLTRYPRLTTIMRQSTQK
                     YGSIHTDGPSKVMTLLVYMNDNWRPDGAGRLRVLYNQKDFEPYAVEVPPTMGTVFAFL
                     RADNSWHGHLPYTGERRVVQVAWVKDASEVARKKKRNKVAQFFKGIFGR"
     gene            1840..2988
                     /locus_tag="VHN20_02685"
     CDS             1840..2988
                     /locus_tag="VHN20_02685"
                     /inference="COORDINATES: protein motif:HMM:NF013847.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin-independent methionine synthase II
                     family protein"
                     /protein_id="HEX2724707.1"
                     /translation="MALDARQERILTTHVGSLPRPDALSEMMATGGTNPDIYDAAVRD
                     AVAAVVRRQAELGIDIVDDGEQSKPGFVAYVHERLGGLSPRADMPSGFQETRETRSFP
                     QFYACGHSGAAHPRVATTEPIRYTGQQQLQTDIDNLKAGLKGVSPADVFMPAASPGII
                     EGYQINRHYKDDDECLYAIAEAMREEYEAIVAAGFMLQIDDPRLAMHYMLNPDKSVED
                     CRKWAQSRIEALNHALRNIPPERVRHHTCYGINMGPRTNDMEFRHIVDLVLTIRANFY
                     SFEAANPRHEHEWRVWETVKLPAGKAIMPGVITHSSVIVEHPDLVAERIGRFAGLVGR
                     ENVIASADCGFASTPRGEPEVHPTIVWAKFASLVEGARRATGKLWGRG"
     gene            3018..4079
                     /locus_tag="VHN20_02690"
     CDS             3018..4079
                     /locus_tag="VHN20_02690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724708.1"
                     /translation="MRIGRVGSLLAACVVAGVLAAPAAASGKDEEVARFYKGKQVTMV
                     IGSSTGGGYDLYGRLVARHIGKYIPGNPTVVPQNMIGAASLVAAQYIYNVGAKDGTAI
                     GAIYPQVVLDQLIGDKASIKLDPRRLNYLGSANSEVYICMVRADTPVKSLDDAMKTEV
                     IMGATAPGSSSYDFPRLLNSVLGTKFRVVSGYPGNQQIALALEKREIDGTCGTGWSTL
                     ASARPHWLRDGFIRVIAQEGLKGSPELDAMRVPMAISYAKTPEQRQIMEIVYSQLLFG
                     RPFVVAPEVPSERLDTLQTAFMSALRDPELLAEAKKLNLEIIAMPGPEVRAMVERLFS
                     TPPEIVDRAKQVLQPAGKQ"
     gene            complement(4249..5205)
                     /locus_tag="VHN20_02695"
     CDS             complement(4249..5205)
                     /locus_tag="VHN20_02695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724709.1"
                     /translation="MKTCALGLAAALLATAAYAQTPAMPGGSTSSEKSGSSTTSSDKA
                     STGASQGSRREMSGASQGAQRESTGSAATSQSAQGSSVRGETSAKATGTTSTRTEGRA
                     RVGIESRETSGVSVRHRSTVRTVSDEPSVSVVRRRRHVAIEEDSPAVQRTVIKRGKQV
                     AVMKKAKKPRKKVAVRSRSRVMVHEEPSVRVRRRTVVHGYESEPSVSVRSRTISSERR
                     SIGVSTEQRTGVSTRTGVSTRTGISGEQRSGASSSTEQRSRGTSEATSGSRGPESTGT
                     ISSSGRSGSSAGQGSSGSSERRQGGSMGNAPAAGGASGGATQ"
     gene            complement(5369..>6409)
                     /locus_tag="VHN20_02700"
     CDS             complement(5369..>6409)
                     /locus_tag="VHN20_02700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HEX2724710.1"
                     /translation="VRGPGNPDFCKKGSDHPSAKLIPVERANRHLTFLDPKTNKYSFV
                     DTCFQTHHLQFGYDANNTLWTSGGGPVVGWVNTKLLDETGDAAKAQGWTALILDTNGN
                     GRRDAYVEANQPVDPAKDKRIVAGFYAVMPSPVDGSVWGSFRSNPGAVVRLEPGSNPP
                     ETALAEIYNVPLPGFGVRGADIDKKGVVWVSLASGHLGSFERSKCKGPLNGPKATGDH
                     CPEGWSFYQYPGPGFEGIGENSAESSYYTWVDQHNTFGLGEDVPMSTGNLNDGLVALK
                     DGRMIVLRVPYPMGFYAKGFDGRIDDAKAGWKGRGLWTTSGDRTPWLMEGGKGRTPIA
                     VHFQIRPDPLAK"
BASE COUNT         1086 a         2107 c         2083 g         1133 t
ORIGIN      
        1 ccgtgatgcc gctcagcatc ctgaccatcg tggtcctggg cgtcatcctg ttcggcgtca
       61 cgactgccac ggaatcggcg gcggtcggcg cggccggcgc gttcctcctg gcgctgcacg
      121 ctcggaccct gaactggaag cgaaccaagg aggccgtgtt cctgacggcc aagacgacgg
      181 cgatggtctg ctggttgttc gtgggatcgg cgctgttctc cgccgtgttc gcgatcctcg
      241 gcggccaggc cctgctcgag cgctgggtgc tgtcgatgga cctgacgccg gtccagttca
      301 tgatcctctc gcaggccttg atcttcgtcc tcggctggcc gcttgaatgg accgagatca
      361 tcatcatctt cgtgcccatc ttcctgccgc tgctgaagca cttcagcatc gacccggtgc
      421 tgtggggcgt gctcgtcttc gtgaacctgc aggcggcgtt cctgtctccg cccgtcgcca
      481 tgtcggcctt ctacctcaag ggcgtctccc cgccgcacgt caccctgaac cagatcttcg
      541 ccggcatgat gccgtacatg ctgatcgtca ttctgtgcat ggtcatcatg tacctgtggc
      601 ccggcctgac actgtggctg ccgaaatacc tttatggcgg ctgaagacgc cgcggcgtga
      661 cctatcagtc ctgacaggcc cggcagtaac cggctctact tgctagtagt cggcctggcc
      721 cgtacagtcc cgctcagtaa agggggactg taccatgtct ttctctaccc tgaatgtgga
      781 cgccgttcgc caggcgccgg tctcgcgcga gccgtacacg tggttcctcg gctcgggcat
      841 cctcaggcag gatgtcatcg acgatctgag gcatgacttt cccaacatca ccaagccggg
      901 cggcctgact gtcgaggaag tcgacctgaa aggccgcttc aagacgctga tcgacgagct
      961 cgagagcgac gagttcagcg ccgaactttc gaagaagttc ggcctcgacc tcacccgtta
     1021 tccccgcctc acgacgatca tgcgtcagtc gacccagaaa tacggctcga tccacacgga
     1081 cgggccgtcc aaggtgatga cgctgctcgt ttacatgaac gacaactggc ggcccgacgg
     1141 ggccggccgc ctgcgcgtgc tctacaatca gaaggacttc gagccctacg cggtcgaggt
     1201 cccgccgacc atgggcacgg tgttcgcctt tctgcgcgcc gacaattcct ggcacggcca
     1261 cctgccctat accggcgagc gacgggtcgt tcaggtcgcc tgggtcaagg atgccagcga
     1321 ggttgcccgc aagaagaagc gcaacaaggt ggcgcagttc ttcaagggca ttttcgggcg
     1381 ctgacggttt ccgccctggc cagacggtca ctgcgaccga accaacgagt tgcccactga
     1441 tcgaccagct gtcgcacaac ggaacagcag ttaagacctt gttaagcaag gacggcgcat
     1501 ccttgaggca atagattcgt gcctcagccg gcaggcctga tcaccctcga tcggcgagcg
     1561 accgtaactg gaagtgggac gagcccgccc gggtctgaca acataaccgt cgcagaacgg
     1621 accaacgaaa ggcccccagc gaaagctccg ggccttcttt gttgtggggc cgcagtgccc
     1681 accttcccct gagctcattt tccggaagcg tctttgcggc gcggtgcagt cgccccctcg
     1741 tcagccggac gcacgacgta cgcgccgcct ccttgcgccg cgccttcgaa cggggcagat
     1801 gggcgccaga aacagcacga agccttgggg agagcaggca tggccctcga cgcgcgacaa
     1861 gagcgcattt tgacgacgca tgtaggcagc ctgccgcggc cggacgcgct gtccgagatg
     1921 atggcgaccg gcggcaccaa tcccgacatc tacgatgcgg ccgttcgcga tgcggtcgcg
     1981 gcggtggtgc gccggcaggc ggagctgggc atcgacatcg tcgacgacgg cgagcagtcg
     2041 aagccgggct tcgtggccta tgttcacgag cggctcggcg gcctgtcgcc acgtgccgac
     2101 atgccgagcg gcttccagga gacgcgcgag acccgctcct tcccgcagtt ctacgcgtgc
     2161 ggccattccg gcgcggccca tccgcgggtc gcgaccaccg agcccatccg ttacaccggt
     2221 cagcagcaat tgcagacgga catcgacaac ctcaaagcgg ggctgaaagg cgtcagcccg
     2281 gcggatgtgt tcatgccggc cgcttcgccg gggatcatcg agggctacca gatcaaccgg
     2341 cattacaagg acgacgacga atgtctctac gccatcgccg aagcgatgcg ggaggaatac
     2401 gaggcgatcg tcgccgccgg gttcatgctg cagatcgacg atccgcgcct ggcgatgcac
     2461 tacatgctca accccgacaa gagcgtcgag gactgccgca agtgggcgca atcgcgcatc
     2521 gaggcgctca atcacgcgct gcgcaacatc ccgccggaac gcgtgcgcca tcatacctgc
     2581 tacggcatca atatggggcc gcgcaccaac gacatggagt ttcggcacat cgtcgacctg
     2641 gtcctgacga tccgcgccaa tttctattca ttcgaggctg ccaatccgcg ccacgagcac
     2701 gagtggcgcg tgtgggagac cgtgaagctc cctgccggca aggccatcat gccgggcgtg
     2761 atcacccaca gctcggtgat cgtcgagcat cccgatctcg ttgccgagcg catcggccgc
     2821 ttcgcaggtc tggtcgggcg cgagaacgtc atcgcaagcg ccgattgcgg ctttgcctcg
     2881 acgccacgcg gagaacccga ggtgcatccc accatcgtat gggcgaagtt cgccagcctc
     2941 gtcgaaggcg cgaggcgcgc cacaggcaag ctgtgggggc gcgggtagat tcactgacgc
     3001 tttgagggga aacgacgatg cgcatcggac gggtcggatc gctgctggcc gcgtgtgtgg
     3061 ttgcgggcgt tctcgccgcg ccggcggcgg cgtccggcaa ggacgaagag gtcgcgcggt
     3121 tctacaaagg caagcaggtg accatggtca tcggctcgtc gaccggcggc ggctacgatc
     3181 tctatggtcg gctggtggcg cgccatatcg gcaaatacat accgggcaac ccgacggtgg
     3241 ttccgcagaa catgatcggc gccgccagcc tcgtcgccgc ccagtatatc tacaatgtcg
     3301 gcgcgaagga cggcacggcg atcggcgcca tctatccgca ggtcgtgctc gaccagctga
     3361 tcggcgacaa ggcgagcatc aagctcgatc cgcgccggct caactatctg ggcagcgcca
     3421 acagcgaggt ctacatctgc atggtgcggg ccgacacgcc ggtcaaaagc ctcgacgacg
     3481 ccatgaagac cgaggtgatc atgggcgcga ccgcgccggg ctcgtcgagc tatgatttcc
     3541 cgcgccttct caacagcgtg ctgggcacga aattccgcgt ggtatccggc tatccgggaa
     3601 accagcagat cgccctggcg ctcgagaagc gcgagatcga tggcacgtgc ggcaccggct
     3661 ggtcgaccct ggcgtcggcg cggccgcact ggctgcgcga tggattcatc cgcgtgatcg
     3721 cgcaggaagg cctgaaaggc agccccgagc tcgatgcgat gcgcgtgccg atggcgatca
     3781 gctatgccaa gacccccgag cagcgccaga tcatggagat cgtgtattcg cagctgctgt
     3841 tcggccgtcc tttcgtggtg gcgcccgaag tgccgtcgga acgcctcgac acgttgcaga
     3901 cggccttcat gtcagcgctc agggacccgg agctgctcgc cgaggcgaag aagttgaatc
     3961 tcgagataat cgccatgccc ggccccgagg tcagggcgat ggtcgagcgg ctcttctcga
     4021 cgccaccgga aatcgtcgat cgggcgaagc aggtcctgca gcccgcggga aagcaataga
     4081 ccccttcgcc aaacgagagg ccgcggcatc taaggagcgc gcggatcgac tgatctgaag
     4141 cgatatcgcc cgcgctgccg aggtgcccgg gctcgatcgt cggagaaaag agagaagggc
     4201 ggccgaggcc gcccttctgc ttagagcatg atcgcgataa gcgtcgtgtt actgggtggc
     4261 gccgcccgag gcgccgccgg ccgccggggc gttccccatg ctgccgcctt gacgacgctc
     4321 gctgctgccg gaggagccct ggccagcgga gctgccgctg cggccggagc tcgagatcgt
     4381 tccggtcgac tcaggcccgc gcgaaccgct cgtggcctcg ctcgtgccac ggctgcgctg
     4441 ttcggtcgag gacgaggcgc cgctgcgctg ctcgcccgaa atcccggtgc gggtcgacac
     4501 gcccgtgcgg gtggacacgc ccgtacgctg ctcggtcgac acgccgatgc tgcgccgctc
     4561 gctcgagatg gtgcggctcc tcaccgagac gctcggctcg gactcgtagc cgtgcacgac
     4621 ggtgcggcgg cggacccgca cgctcggctc ttcatggacc atgacgcggc tgcggctgcg
     4681 cacggcgacc ttcttgcgcg gcttcttagc ctttttcatc acggccactt gcttgccgcg
     4741 cttgatgacg gtgcgctgca ccgccggcga atcttcttca atggcaacgt ggcgacgacg
     4801 gcggaccacc gacacgctcg gctcgtcgga caccgtacgt acggtgctgc ggtgccggac
     4861 cgaaacgcca ctggtctcgc gagattcgat gccgacacgg gcccgccctt cggtgcgggt
     4921 gctcgtcgtg cccgtagcct tcgcgctcgt ctcgccgcgg acgctggagc cctgggcgct
     4981 ttgcgaggtc gcggcactgc cggtgctttc gcgctgggcg ccctgggaag cgccgctcat
     5041 ctcacggcgt gagccctgcg aagcgccggt cgaggccttg tccgacgacg tcgtcgacga
     5101 tccggacttc tcggaagagg tgctgccgcc tggcattgct ggggtttggg cataggccgc
     5161 cgtcgccagc aacgctgcgg cgagcccaag agcgcatgtc ttcatctacg ttctcctgta
     5221 caggaaagac cgagaagcaa acgcgctgta ttcttgagaa gttccgtagt ggtcaaggcc
     5281 tggaaccttg accgggccat cgcagatcag caaaaacccc ggctcgcgcc ggggctttgt
     5341 tccgataagc ttagccgtag gccggacgtc acttggcgag ggggtccgga cggatctgga
     5401 agtgcacggc aatcggcgtc cggcccttgc cgccttccat gagccagggc gtgcggtcgc
     5461 cgctcgtcgt ccatagcccc ctgcccttcc agccggcctt ggcgtcgtcg atgcgcccgt
     5521 cgaaaccctt ggcgtagaag cccatcggat atggcacgcg cagcacgatc atccggccgt
     5581 ccttgagcgc cacgaggccg tcgttgaggt tgccggtcga catgggaacg tcctcgccga
     5641 gcccgaacgt gttgtgctgg tcgacccacg tgtaatagct cgactcggcg ctgttctcgc
     5701 cgatgccctc gaagccaggt ccgggatact ggtagaacga ccagccctcg gggcaatgat
     5761 cgccggtcgc cttcgggccg ttgaggggcc ctttgcactt gctcctttcg aagctgccga
     5821 gatggccgct cgccagcgac acccagacga cgcccttctt gtcgatgtcg gcgccgcgca
     5881 cgccgaagcc gggcagcggc acgttgtaga tctcggcaag cgcggtctcg ggcgggttgg
     5941 agccgggctc gagccgcacg acggcccccg ggttgctcct gaaggatccc cagacggagc
     6001 catccaccgg gctcggcatg acggcataga agccggcgac gatacgcttg tccttcgccg
     6061 gatcgaccgg ctggttggct tccacatagg cgtcgcgccg accgttgccg ttggtgtcca
     6121 ggatgagcgc cgtccagccc tgcgccttgg cggcatcgcc ggtttcgtcg agcagcttgg
     6181 tgttgaccca gccgaccacc ggaccgccgc cgctcgtcca gagcgtgttg ttggcgtcat
     6241 agccgaactg caggtgatgc gtctggaagc acgtgtcgac gaagctgtat ttgttcgtct
     6301 tgggatcgag gaaagtcagg tgccggttgg cgcgttcgac cggaatgagc ttcgccgagg
     6361 gatggtcgga gcccttcttg cagaagtcgg ggttgccagg gccacgaac
//
LOCUS       DATAIQ010000154         3585 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_100836, whole genome shotgun sequence.
ACCESSION   DATAIQ010000154 DATAIQ010000000
VERSION     DATAIQ010000154.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3585)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3585)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3585
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_100836"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1441
                     /locus_tag="VHN20_02705"
     CDS             <1..1441
                     /locus_tag="VHN20_02705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013912826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX2724711.1"
                     /translation="ANSSFAAIHWLAPHYSTLLKFDIPNYPKIVGDVAQSWEVSKDQL
                     TYTFKLRPNIKFHDGTGMTSADVKATYDRLRNPPEGVVSLRKGSFEDIAAVDTPDPQT
                     VVFKLSKPDASMLANFASPWNCIYSAAKLKQDPNFPKNNILGTGAFRFVEHVKGSHWV
                     GQRFDNYFLKDRPYLDGFRAVLLSGAPMINAMNGGQIMAEFRGFSPAERDRLVQALGD
                     KVQVSESGWVCKLDILFNTAKKPFDDPRVRRALSMAIDRWGGARNLQRIAFVKDVGGI
                     IRPGYEFAAKKEELTKYPGYAENIAQAREQAKALLKEAGVPNLKFALTNRTVAMPYTP
                     TALFVIDQWRQIGVQVEHNQLETAPYQASLQSGNYEAGLNFACDFMDEPNLQLLNYIS
                     EDKSSLNYGKYKDPKLDDLYERQKRATNKGERYKLIREFERHLFDQSYTVPLIWWNRI
                     IVSDKRLKGWANSPSHYIGQDLVNVWIAQ"
     gene            1489..2442
                     /locus_tag="VHN20_02710"
     CDS             1489..2442
                     /locus_tag="VHN20_02710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012564651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX2724712.1"
                     /translation="MLRYVVHRLLLAIPTLLGVAVLTFFMLRVVPGDIVEIKLCGDGG
                     NVSREMIDQERERLGLNKPLVVQFADWMKGLATLDLGTSMWTGRPVAEEIGGRLELSL
                     QVAVMAAIIAVLIAIPLGTLSALYRGTFLDYVVRIVTIAGLAVPSFWLGMLMMLGLLW
                     AFNWLPPLTYTPFYVDPLANLSQLIWPALAVGYRYAAVVARMVRSSIIEVMKEDYIRT
                     ARAKGVFERLVVSRHAMRNAMLPAITVIGLEFAFLIGGLVVTEQVFNLNGVGRLFVQA
                     VSRNDFMLIQSLVMLIAVIFVLVNLVVDLLYAALDPRIRYR"
     gene            2452..3342
                     /locus_tag="VHN20_02715"
     CDS             2452..3342
                     /locus_tag="VHN20_02715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012564652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX2724713.1"
                     /translation="MASVATTAPASVRQRNALLTFVVEQPLGTVAFVVILVMALAAIF
                     ADWAAPYDPVAIDFEAMLAAPSALHPLGTDALGRDILSRVIYGARTALSIGFLSSLLG
                     CSVGAVIGVASAYFGGRIDLVVQRFVDILLAFPIIVLALVVVAMLGRNLVAGIDINLI
                     VAIAIPIVPKVARVIRAAALSIREMPYIDAARAAGYSHRRIIFRHMCPNVVAPYLIML
                     TAFIAQAILLEASLSFLGLGVSEPKPAWGLMLAGNASDFYREAPWMVIFPGLAISLAV
                     FAFNLLGDSLRDWLDPKFKT"
BASE COUNT          608 a         1191 c         1102 g          684 t
ORIGIN      
        1 cgccaattcg agcttcgcgg ccattcactg gctcgcgccc cactactcga cgctcctcaa
       61 gttcgacatt cccaattatc cgaagatcgt cggagacgtc gcgcagtcgt gggaggtatc
      121 gaaggaccag ctcacctaca cgttcaagct gcgccccaac atcaagttcc acgacggaac
      181 gggcatgacc tcggccgacg tgaaggcgac ctacgaccgc ctgcgcaacc cgcccgaagg
      241 cgtcgtgtcg ctgcgcaagg gctcgttcga ggacatcgcc gcggtcgata cgcccgatcc
      301 gcaaacggtc gtgttcaagc tctcgaagcc cgacgcctcc atgctggcga acttcgcctc
      361 gccgtggaac tgcatctatt cggctgccaa gctcaagcag gacccgaact tcccgaagaa
      421 caacatcctg ggcacaggcg ccttccggtt cgtcgagcac gtcaaggggt cgcactgggt
      481 cggccagcgc ttcgataact acttcctgaa agaccggcct tatctcgacg gcttccgcgc
      541 cgtgctgctc tccggcgcgc cgatgatcaa cgccatgaac ggcgggcaga tcatggctga
      601 gttccgcggc ttctcgccgg ccgaacgcga ccgccttgtg caggcgctgg gcgacaaggt
      661 gcaggtctcg gaatcgggct gggtatgcaa gctcgacatc ctgttcaaca cggcaaagaa
      721 accgttcgac gatccgcgcg ttcggcgcgc gctgtcgatg gcgatcgacc gctggggcgg
      781 agcgcgcaac ctgcagcgca tcgctttcgt caaggatgtc ggcggcatca tcaggcccgg
      841 ctatgaattc gccgcgaaaa aggaggagct caccaaatac ccgggctacg ccgagaacat
      901 cgcgcaagcc cgcgagcagg ccaaggcgct gctcaaggag gcgggcgtgc cgaacctcaa
      961 gttcgcgctg accaatcgca ccgtcgcaat gccctatacg ccgacggcgc tgttcgtgat
     1021 cgaccagtgg cgccagatcg gcgtgcaggt cgagcacaac cagctcgaga cggcgcccta
     1081 ccaggcaagc ctgcagagcg gcaattacga ggccgggctc aatttcgcct gcgacttcat
     1141 ggatgagccc aacctgcagc tcttgaacta catctccgag gacaagagct cactcaacta
     1201 cggcaagtac aaggatccca agctcgacga cctctatgag aggcagaagc gcgccaccaa
     1261 caagggcgag cgctacaagc tgatccgcga gttcgagcgg cacctgttcg accagtccta
     1321 cacggtgccg ctgatctggt ggaaccggat cattgtctca gacaaacgcc tgaagggctg
     1381 ggcgaattcg ccgagccatt atattggcca ggatctggtc aacgtctgga tcgcgcaatg
     1441 aggtgatgat cggagccggc cgccgggccg gctccatgcc ggtgttccat gctgcgctac
     1501 gtcgttcatc ggttgctgct ggcgatcccg acccttctcg gggtcgcggt gctcacattc
     1561 ttcatgttgc gcgtcgtgcc gggcgacatc gttgagatca agctgtgcgg cgacggcggc
     1621 aacgtgagcc gcgagatgat cgaccaggaa cgcgagcggc tcggtctcaa caagccgctc
     1681 gtcgtgcagt tcgccgactg gatgaagggc ctcgccaccc tcgatctggg cacgtccatg
     1741 tggaccggga ggccggtcgc cgaggagatc ggcggcaggc tcgagctttc gcttcaggtc
     1801 gcggtgatgg cggcgatcat cgcggtgctt atcgccatcc cgctcggcac attgtcggcg
     1861 ctctaccgcg gcacgttcct cgactatgtc gtgcggatcg tcacgatcgc ggggctcgcc
     1921 gtgccgtcgt tctggctcgg catgctgatg atgctcggcc tgctctgggc cttcaactgg
     1981 ctgccgccgc tcacctacac gccgttctat gtcgacccgc ttgccaacct atcgcaactg
     2041 atctggccgg cgctcgccgt cggctaccgt tacgcggccg tcgtggcacg catggtgcgg
     2101 tcgtcgatca tcgaggtgat gaaggaggat tacatccgga cggcgcgcgc caagggcgtt
     2161 ttcgagcgcc tcgtcgtctc gcgtcatgcc atgcgcaacg ccatgctgcc ggccatcacg
     2221 gtcatcggtc tcgaattcgc attcctgatc ggcggcctcg tcgtgacgga gcaggtgttc
     2281 aacctcaacg gcgtcggccg gctgttcgtg caggccgtgt cgcgcaacga cttcatgctg
     2341 atccagagcc tggtcatgct gatcgccgtg atcttcgtgc tcgtgaacct cgtcgtcgat
     2401 ctactctacg cggcactcga tccgcggatc cgataccggt aggagcgtcc catggcgagc
     2461 gtcgcgacca ccgctccagc atcggtccga cagcgcaacg cgctgctgac cttcgtggtc
     2521 gagcaaccgc tcggcaccgt cgccttcgtc gtgatcctgg tgatggcgct ggcggcgatt
     2581 ttcgccgact gggcggcgcc gtatgacccc gtggcgatcg atttcgaggc catgctggcg
     2641 gcgccgtcgg cgctgcaccc gctcggcacc gacgcgttgg gccgcgacat cctttcgcgg
     2701 gtcatctatg gcgcacgcac ggcgctgtcg atcgggtttc tgtcctcgct tctcggctgc
     2761 tcggtcggcg cggtcatcgg tgtcgcgtcg gcctatttcg gcgggcgcat cgacctggtg
     2821 gtgcagcgtt tcgtcgacat cctgctggcc tttccgatca tcgtcctggc gctcgtcgtc
     2881 gtcgccatgc tcggccgcaa cctcgtggcg gggatcgaca tcaacctgat cgtggcgatc
     2941 gccattccga tcgtgcccaa ggtggcgcgg gtgatccggg cggcggccct ctcgatccgg
     3001 gagatgccct atatcgatgc ggcgcgcgcc gccggctaca gccatcgccg gatcatcttc
     3061 cggcacatgt gcccgaacgt cgtggcgccc tacctgatca tgctgaccgc cttcatcgcc
     3121 caggcgatcc tgctcgaggc gtcgctgtcg ttcctgggtc tcggcgtgtc cgaaccgaag
     3181 cccgcctggg gcctcatgct ggccggcaac gcgtcggatt tctaccgcga ggcgccctgg
     3241 atggtgatct ttccgggcct tgccatctcg ctggcggtgt tcgccttcaa tcttctgggc
     3301 gatagcctca gggactggct cgacccgaag ttcaagacct aggcccggat tcggtgccat
     3361 tcaccccgtt ttcgggcgca tgatcgaaat cggcgaggcg cttcccactt cgccgagcgg
     3421 tccagccggg aacagagtct caacctcatc gtttgtgcgt catggccaag cctctcgccg
     3481 aatacaacgc caagcgcgac ttcagcaaaa cgccggagcc caaaggcaag cccgccaagg
     3541 gggaggggtt cagcttctgc atccagaaac acgacgctac ccgtc
//
LOCUS       DATAIQ010000155         2107 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_234642, whole genome shotgun sequence.
ACCESSION   DATAIQ010000155 DATAIQ010000000
VERSION     DATAIQ010000155.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2107)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2107)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2107
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_234642"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            120..560
                     /locus_tag="VHN20_02720"
     CDS             120..560
                     /locus_tag="VHN20_02720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007568707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2852 domain-containing protein"
                     /protein_id="HEX2724714.1"
                     /translation="MSCASSATWNSGTARARCGSPRRAWEIVGIILGFIFVWPLALAY
                     LVWKLTGYPMPAEWRSWMERNFVPAFQGTFRAASPFQSTGNSAFDDYRRAELARLEEE
                     RRRLEEEAHAFASFVEELKRAKDREEFDAFMARRRNGGHGPASA"
     gene            complement(664..984)
                     /locus_tag="VHN20_02725"
     CDS             complement(664..984)
                     /locus_tag="VHN20_02725"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HEX2724715.1"
                     /translation="MQERRKTARPRTYFSGQIVYNERSALMDCLVRNFTGHGAKLVFT
                     NTATVPREFELFIARHDRRLRARMVWCNANEAGVAFEHARRPVVPCRPAGRPVKAEPE
                     RWAI"
     gene            complement(1105..1749)
                     /locus_tag="VHN20_02730"
     CDS             complement(1105..1749)
                     /locus_tag="VHN20_02730"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012319893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0047429 - nucleoside triphosphate
                     diphosphatase activity [Evidence IEA];
                     GO_process: GO:0009146 - purine nucleoside triphosphate
                     catabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="non-canonical purine NTP pyrophosphatase"
                     /protein_id="HEX2724716.1"
                     /translation="MPRILTGKVVIATHNPGKLREMRELLAPYGIEAVSAGELGLPEP
                     DETGTMFAENAAIKAHAATASGLPAFADDSGICIDALDGAPGLFSARWAGAKKDFAVA
                     MERVESELRRRGATGPQDRRAHFVSALVLAWPDGHEELFEGRVFGTMVWPPRGRKGFG
                     YDPMFQPDGHVMTFGEMSAEEKHGITWSEAGAQALSHRARAFVDLADACLRKPA"
     gene            complement(1847..>2107)
                     /locus_tag="VHN20_02735"
     CDS             complement(1847..>2107)
                     /locus_tag="VHN20_02735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012452405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease PH"
                     /protein_id="HEX2724717.1"
                     /translation="VNPLREHVAAISCGIHAGIPVLDLDYAEDSAAETDANFVVTGSG
                     GLVEVQGTAEGKPFSEDEFLALLRLAKGGVAQLIELQKMAVA"
BASE COUNT          319 a          738 c          703 g          347 t
ORIGIN      
        1 gggtcatggc gcccgtgcac ggaacggcgc gcaccaaata attttttggt gagccgcttg
       61 aaagcctggc catgctcccg catgttaatg ttgttcacat tcacatggtg gagaccacga
      121 tgtcctgtgc ttcgtccgcg acctggaatt ccggcaccgc ccgtgcccgt tgcggctcgc
      181 cgcgccgcgc ctgggagatc gtcgggatca tcctcggctt cattttcgtg tggccgctcg
      241 ccctcgccta cctggtctgg aagctcaccg gctatccgat gccggccgaa tggcgcagct
      301 ggatggagcg caacttcgtt ccggccttcc agggcacgtt ccgggcggcc tcgcccttcc
      361 agagcacggg taattccgcc ttcgacgact atcgccgcgc cgagctggcc cggctcgagg
      421 aggaacgccg ccgtctcgag gaggaggcgc atgccttcgc gtccttcgtg gaagagctga
      481 agcgcgccaa ggaccgcgag gagttcgacg ccttcatggc gcggcggcgc aacggcggcc
      541 atggcccggc gtcggcgtaa gcaacgcggc ttccgataaa cacgttcggc ggggattgct
      601 gccccgccgt gaacattccc cgccgggcgg cacgcctcct gccgcccgct ttttatatcc
      661 gtttcagatc gcccagcgct cgggctcggc cttgaccggt cggccggcgg gcctgcacgg
      721 gacgacgggc cggcgcgcgt gctcgaaggc gacgccggcc tcgttggcgt tgcaccagac
      781 catgcgggcg cgcagcctgc ggtcatgccg ggcaatgaag agctcgaact cccgcggcac
      841 cgtcgcggtg ttggtgaata cgagcttcgc cccgtgcccg gtgaagttcc tgaccagaca
      901 atccatcagc gcgctgcgct cgttgtagac gatctggccg ctgaaatagg tgcgtgggcg
      961 agcggtcttg cgcctctcct gcatcgcacg atcctccgtt gctgcctgga gcttagcacc
     1021 gacggccggt tgcgcccggg aaagcggcgg ttaacgtatc ggattaaggt aaagggcggc
     1081 gcgagcggcg gcggaacggc ccgttcacgc cggcttgcgc aggcacgcgt cggcgaggtc
     1141 aacgaaggcg cgggcccggt gcgacagcgc ctgggcgccc gcctcgctcc aggtgatgcc
     1201 gtgcttctcc tccgccgaca tctcgccgaa cgtcatgacg tggccgtccg gctggaacat
     1261 cgggtcgtag ccaaacccct tccggccgcg cggcggccac accatggtgc cgaagacgcg
     1321 gccctcgaac agctcctcgt gcccgtccgg ccaagccagc acgagcgccg agacgaaatg
     1381 ggcgcgccgg tcctgcggtc cggtcgcgcc acgccggcgc agctcgctct cgacgcgctc
     1441 catggccacc gcgaaatcct ttttcgcgcc ggcccagcgt gcggaaaaca ggcccggcgc
     1501 gccgtcgagc gcatcgatgc agatgccgga atcgtcggca aaggcgggca ggccggacgc
     1561 cgtcgcggcg tgcgccttga tggccgcgtt ctcggcgaac atggtgccgg tctcgtccgg
     1621 ctcgggcagc ccgagctcgc ccgccgacac cgcctcaatg ccgtagggcg cgagcagctc
     1681 gcgcatctcg cgcagcttgc cgggattgtg cgtggcgatg acgaccttgc cggtcaggat
     1741 gcggggcatc tcatcccctg atgacacgca ttggttccca caaccgccgc cctcacccgg
     1801 tcggcttcgc cgactcgacc tctccccgca agcggggcga ggcaaattac gcgaccgcca
     1861 tcttctgcag ctcgatgagc tgggcgacgc cgcccttggc gaggcgcagg agggccagaa
     1921 actcgtcctc ggagaacggc ttgccctcgg cggtgccctg cacctcgacc aggccgccgg
     1981 agccggtgac gacgaaattg gcatcggtct cggcagccga atcctcggca tagtcgagat
     2041 ccagcaccgg gatgccggcg tggatgccgc acgagatcgc cgccacgtgc tcgcgcaacg
     2101 ggttgac
//
LOCUS       DATAIQ010000156         1685 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_377530, whole genome shotgun sequence.
ACCESSION   DATAIQ010000156 DATAIQ010000000
VERSION     DATAIQ010000156.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1685)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1685)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1685
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_377530"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            106..>1685
                     /locus_tag="VHN20_02740"
     CDS             106..>1685
                     /locus_tag="VHN20_02740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018697817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEX2724718.1"
                     /translation="MDTQVLIVGAGPVGLTLAVDLGMKGVKCTLIEQKEAPQFLPKME
                     RCNARTMEIYRRMGLAEKIRTAGLHRDVPMDVYVVLAMNEAPLLRLPYPSVAEAQREV
                     EASTDGSMPCEPYQLISQYTLEPLLKSIAETLPSVTVRYGCEFVSFTQDETGVTAEIK
                     ELGGSTSRIRAAYLVGCDGGASPVRKQLGIKLRGEGNLLQLRQALYYCDELFDKIPIG
                     NGPGKGRHYHVADGQATFLIMQDSTRHWTLHAVVEKDEDMAAQFEMTVAIPVKYEMLY
                     VGQWKQNLLLADRYGHGRVFLAGDSAHLVIPTGGLGMNTGVGDAIDLSWKLAGTLQGW
                     GGPNLLGSYEIERRQIGDRNVGASRYASLGRRKWRSQYRPNIRDNTPEGQQTRDNLAR
                     IADIEQRKTNEMIGAELGYRYVGSPIIWEEPGGPEHLFRDYVPTTWPGARLPHVWLDN
                     GAAMQDRVGKGYTLLRLGGTQADTSALERAIRSYGAPLEVLDIADQRARDVYGYDLLL
                     LRPDMHVVWRGQRAPDAP"
BASE COUNT          298 a          559 c          562 g          266 t
ORIGIN      
        1 cgggcgcgag gcgggcctcg tcccgccggc gtgggatcgc tacgtctgag gtttttcagg
       61 aaaggcgact cgaacgaccc cgactgttcg gaagagaaag gaacgatgga tactcaggtt
      121 cttatcgtgg gcgccggccc ggtcggtctg acgctcgccg tcgacctcgg catgaagggc
      181 gtgaagtgca cgctgatcga gcagaaagag gcgccgcaat tcctgcccaa gatggagcgg
      241 tgcaacgccc gcaccatgga gatctatcgc cggatggggc ttgcggagaa gatccgcaca
      301 gcggggcttc atcgcgacgt cccgatggac gtctatgtcg tgctggcgat gaacgaggcg
      361 ccgctcctgc gactgccata tccatcggtc gcggaggcgc agcgcgaggt cgaggcgagc
      421 accgacggct cgatgccgtg cgagccgtat cagctgatct cgcaatacac gctcgagccg
      481 ctgctcaaat cgatcgccga gacgctgccg agcgtcacgg tgcgctacgg ctgcgagttc
      541 gtgtcgttca cgcaggacga gaccggcgtc accgccgaga tcaaggagct gggcggctcg
      601 acgtccagga tccgcgccgc ctatctcgtc ggctgtgacg gcggcgccag cccggttcgc
      661 aagcagctcg gcatcaagct gcgcggggag ggcaacctcc tgcagttgcg ccaggcgctg
      721 tattattgcg acgagctgtt cgacaagatc ccgatcggca acggccccgg caagggccgc
      781 cactaccatg tcgccgacgg ccaggcgacg ttcctgatca tgcaggactc gaccaggcat
      841 tggacgctgc acgccgtcgt cgagaaggac gaggatatgg cggcgcagtt cgagatgacg
      901 gtcgcgatcc ccgtcaaata cgagatgctt tacgtcggcc agtggaagca gaacctgctt
      961 ctcgccgacc gttacggcca tggccgcgtg tttctggccg gcgattccgc gcatctcgtg
     1021 atcccgaccg gcggcctcgg catgaacacc ggcgtgggcg atgccatcga cctgtcatgg
     1081 aagctcgccg gcaccctgca gggctggggc gggccgaacc tgctcggctc gtacgagatc
     1141 gaacgccgcc agatcggcga ccgcaacgtc ggcgcgtcgc gctatgcctc gctcggccgg
     1201 cgcaaatggc gctcccaata ccggccgaac atccgcgaca acacgccgga aggtcagcag
     1261 acccgcgaca acctcgcgcg catcgccgat atcgagcagc gcaagaccaa cgagatgatc
     1321 ggggccgagc ttggctaccg ctatgtcggc tcgccgatca tctgggagga gcccggcggg
     1381 ccggagcatc tgttccgcga ctacgtgccg accacttggc cgggcgcccg tctgccgcat
     1441 gtctggctgg ataacggcgc cgccatgcag gaccgcgtcg gcaaaggtta tacgctgctg
     1501 cgcctcggcg gcacgcaggc cgacacttcg gcgctcgaac gcgccatccg gtcgtacggc
     1561 gcgccgctcg aggtgctcga catcgccgac cagcgtgccc gcgacgtcta tggctacgac
     1621 ctgctgctgc tgcgacccga catgcacgtt gtctggcgcg gccagcgcgc tccggatgcg
     1681 cccaa
//
LOCUS       DATAIQ010000157         1539 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_377567, whole genome shotgun sequence.
ACCESSION   DATAIQ010000157 DATAIQ010000000
VERSION     DATAIQ010000157.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1539)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1539)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1539
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_377567"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1539
                     /locus_tag="VHN20_02745"
     CDS             <1..>1539
                     /locus_tag="VHN20_02745"
                     /inference="COORDINATES: protein motif:HMM:TIGR01840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="PHB depolymerase family esterase"
                     /protein_id="HEX2724719.1"
                     /translation="GIPAASAGTLSEVAGFGSNPGNLKMFKYIPDRLRDPAPLVVVLH
                     GCNQSAGGYYEHSGWAKYADQGGFALLLPEQKAGLGPLLPDFPGLDTRNHPTRCFNFA
                     ELRDSRRGSGEALSIRQMIDRMKIEAGIDDKRIFVTGLSAGGGMTAVMLATYPEVFAG
                     GGIVAGLPYRCGTATLTAEMDCGVTLANRPHRTAPDRTPAAWGDLVRQAAPQHQGPWP
                     RVSIWQGTADGTVDPLNARELVEQWTNVHGIDQAADETESGANVTRRVFRNTQGTALV
                     ESFELRGFGHATPIDPDGRDEACGSLGDSFIVDGNICSSHRIARFWGLLGEPPTVTIA
                     EAVVQGTTLSVSGTASDRDGTVTAVAVHLEGRSPRPAVRAQGTAKWSASFADLDDNTS
                     YTPVVTAIDDAGLLATTTGTPVSLGTVANSPPDVVISVARGEQDCLSVNGVATDRDGR
                     VTDVAVKLGTREFRPARLRQDQYRFRECRLPNGSYTVQVRAKDNLGATGDAHAEAVEI
                     SSVVS"
BASE COUNT          260 a          531 c          525 g          223 t
ORIGIN      
        1 cggcatcccg gcagcatcgg ccggcacgct ctccgaggtc gcgggtttcg gctcgaatcc
       61 gggcaacctc aagatgttca aatacatccc cgaccggctg cgcgatccgg cgccgctcgt
      121 cgtcgtcctg cacggctgca atcagtcggc tggcggatat tacgagcaca gcggatgggc
      181 caagtatgcc gatcaggggg gcttcgcgct gctgctcccg gaacagaagg ccggcctcgg
      241 gccgcttctg ccggacttcc ccgggctcga cacccgcaat catccgaccc ggtgcttcaa
      301 cttcgcggag ctgcgcgatt cgaggcgcgg cagcggcgaa gcgctgtcga tcaggcagat
      361 gatcgacagg atgaagatcg aggccggcat cgacgacaag cggatcttcg tcaccgggct
      421 ttcggcgggc ggcggcatga ccgccgtgat gctcgcgacc tacccggagg tgttcgccgg
      481 cggaggaatc gtcgctggcc tgccgtaccg ctgtggcacc gccacgctga cggccgaaat
      541 ggactgcggc gtgacgctgg cgaaccggcc gcacagaacg gcgcccgacc gcacgcccgc
      601 cgcgtggggc gacctggttc gtcaggcagc gccccagcat cagggaccct ggccgcgcgt
      661 gtcgatctgg caggggacgg ccgacggcac cgtcgatccg ctcaatgcgc gcgagctggt
      721 cgagcaatgg accaacgtgc acggcatcga ccaggctgcc gacgagaccg agagcggcgc
      781 caacgttacc cggcgcgtct tcaggaacac gcaaggcacc gcgcttgtcg aaagcttcga
      841 gcttcgcggc ttcggccacg cgaccccgat cgatcccgac ggccgcgacg aagcctgcgg
      901 cagccttggc gattccttca tcgtcgacgg caacatctgc tcgtcgcacc gcatcgcgcg
      961 cttctgggga ttgcttggtg agccgcccac cgtgaccatc gcggaggcgg tggtgcaggg
     1021 cacgaccctg agcgtgagcg ggacggcaag cgaccgggac ggaaccgtca ccgcagtcgc
     1081 cgtgcatctc gaagggcgca gcccgcggcc ggcggttcgc gcacaaggca ctgcgaagtg
     1141 gtccgcgagc ttcgccgacc tcgacgacaa caccagctat acgccggtcg tcacggcgat
     1201 cgatgacgcg ggcctgctcg ccacgacgac cggcacgccg gtttcgctcg ggacggtcgc
     1261 caactcaccg ccggacgtag tgatcagcgt ggcccggggc gagcaggact gcttgagtgt
     1321 caatggcgtc gcgaccgatc gcgacggtcg cgtaacggac gttgctgtca agctcggcac
     1381 gcgcgagttt cgccccgcac gcctgcgcca ggaccaatac cgcttccggg aatgccgcct
     1441 gccgaacggg agctacaccg tgcaggtgcg cgccaaggac aatctcggcg ccactggcga
     1501 cgcgcacgcg gaggccgtgg agatctcgag cgtcgtgtc
//
LOCUS       DATAIQ010000158         2394 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_423747, whole genome shotgun sequence.
ACCESSION   DATAIQ010000158 DATAIQ010000000
VERSION     DATAIQ010000158.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2394)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2394)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2394
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_423747"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..717)
                     /locus_tag="VHN20_02750"
     CDS             complement(<1..717)
                     /locus_tag="VHN20_02750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008129720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEX2724720.1"
                     /translation="MFGSPHARRGFTMDLDWLRDFLALADEKNFSRAADARHVSQPAF
                     SRRIRALEDWIGTPLFERSAQGATLTPAGGHFRPLAEELVRALRRAQRETRAVGTRET
                     TALSIAATHALSFTFFPGWIRKHVRLEALGTLNLISDSMEACEEILLAGEVDFLLCHH
                     HAGAPTRFDPDRFPSIAVGADTLVPVSAPDADGGPVWPLQADRDGPTRLLAYSQASGL
                     GRILAAHHATGNEGAGPETVF"
     gene            782..1945
                     /locus_tag="VHN20_02755"
     CDS             782..1945
                     /locus_tag="VHN20_02755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002724150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mandelate racemase/muconate lactonizing enzyme
                     family protein"
                     /protein_id="HEX2724721.1"
                     /translation="MRITDVREITQPIASPIRNAYIDFSKMTTSLVAVVTDVIRDGRR
                     VVGYGFNSNGRYGQGGLIRERFRDRILEAPPESLRDAAADNLDPHKIWAAMMVNEKPG
                     GHGERSVAVGTIDMAVWDAVAKIAGKPLFRLLAERKGREANPRVFVYAAGGYYYPGKD
                     DSALRAEMRGYVDRGYNVVKMKIGGAPIAEDRRRIEAVLAEIGSQAQLAVDANGRFDL
                     ETAIAYARMLREYPLFWYEEAGDPLDFALQAALAEFYPGPMATGENLFSHQDARNLIR
                     YGGMRPDRDWLQFDCALSYGLVEYLRTLDVLTQAGWSPSRCIPHGGHQMSLNIAAGLG
                     LGGNESYPDLFQPYGGFPDSVRVDNGHIVMPDLPGIGFEGKSDLIKVMRELAE"
     gene            complement(2061..>2394)
                     /locus_tag="VHN20_02760"
     CDS             complement(2061..>2394)
                     /locus_tag="VHN20_02760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020092370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MscL family protein"
                     /protein_id="HEX2724722.1"
                     /translation="VIGAVTGGLDFSNYYLPLSSKVQSGLSYADAKKAGAVLGYGQFL
                     TAALNFIIVAFVLFLVVRAMNRLMRKEEAKADVAKPAELPADVRLLTEIRDQMALLNN
                     AVSARARL"
BASE COUNT          399 a          830 c          809 g          356 t
ORIGIN      
        1 gaacacggtc tcggggccgg cgccttcgtt gccggtagcg tgatgcgcgg cgaggatgcg
       61 gccgaggccg gaggcctggc tgtaggcgag gagacgcgtc ggcccgtcgc ggtcggcttg
      121 caacggccag acgggaccgc cgtccgcgtc gggcgcgctg accgggacga gggtgtcggc
      181 ccccaccgcg atgctcggaa agcggtcggg gtcgaaacgc gtcggcgcgc cggcgtgatg
      241 gtggcagagc aggaaatcga cctcgccggc gagcaggatc tcctcgcacg cctccatgct
      301 gtcggagatc aggttgagcg tgccgagcgc ctcgagccgg acgtgttttc ggatccagcc
      361 cgggaagaag gtgaaggaga gcgcatgcgt cgcggcgatc gacagggccg tcgtctcgcg
      421 cgtgccgacc gcccgcgtct cccgctgcgc gcgccgcaag gcgcgcacca gctcctcggc
      481 aagcggccgg aaatggccgc ccgccggcgt cagggtggcg ccctgggcgc tgcgctcgaa
      541 cagcggggtg ccgatccagt cctccagggc gcggatgcgg cggctgaaag cgggctgact
      601 gacgtgacgg gcatcggcgg cacgtgagaa gtttttctcg tccgcgagcg ccagaaaatc
      661 cctgagccag tccagatcca tggtgaagcc gcgccgcgca tgaggcgatc cgaacatcgc
      721 attggccaag cggcgccgtc cagtctaagc ccccctggct caatttcctg ggagacgccc
      781 cgtgcgcatc accgacgtcc gcgagatcac gcagccgatc gcctctccga tccgcaacgc
      841 ctatatcgac ttctcgaaga tgacgacgag cctcgtcgcc gtcgtcaccg acgtgatccg
      901 cgacggccgg cgcgtcgtcg gctacggctt caactcgaac ggccgctatg gccagggcgg
      961 gctgatccgc gagcgcttcc gcgaccgcat cctcgaagcg cctccggaga gcctgcgcga
     1021 cgccgccgcc gacaacctcg acccgcacaa gatctgggcg gcgatgatgg tcaacgagaa
     1081 gcccggcggc cacggcgagc gctcggtggc ggtcggcacg atcgacatgg ccgtgtggga
     1141 cgcggtggcg aagatcgccg gcaagccgct gttccggctc ctcgccgagc gcaagggccg
     1201 cgaggccaac ccgcgcgtct tcgtgtatgc ggccggcggc tattattatc ccggcaagga
     1261 cgatagcgcg ctgcgcgccg agatgcgcgg ctacgtcgac cgcggctaca acgtcgtcaa
     1321 gatgaagatc ggcggcgcgc cgatcgccga ggaccggcgc cgcatcgagg cggtgctcgc
     1381 cgagatcggc tcgcaggcgc agctcgcggt cgacgccaac ggacgcttcg acctcgaaac
     1441 cgcgatcgcc tacgccagga tgctgcgcga gtatccgctg ttctggtacg aggaggccgg
     1501 cgatccgctc gacttcgcgc tgcaggcggc gctggcggaa ttctacccgg ggccgatggc
     1561 gacgggcgag aacctgttct cgcaccagga cgcgcgcaac ctcatccgct acggcggcat
     1621 gcgcccggat cgtgactggc tgcaattcga ctgcgcgctg tcctacggcc tcgtcgaata
     1681 cctgcgcacg ctcgacgtgc tcacgcaggc cggctggtcg ccgagccgct gcatcccgca
     1741 tggcggacac cagatgtcgc tcaacatcgc cgccggcctc gggctcggcg gcaacgagag
     1801 ctatcccgac ctgttccagc cttacggcgg cttccccgac agcgtgcgcg tcgacaacgg
     1861 ccacatcgtc atgcccgacc ttcccggcat cggcttcgaa ggcaagtccg acctcatcaa
     1921 ggtgatgcgc gagctcgccg agtgacgccg cgcccgcggc gccatcggca ccgcgggcgc
     1981 tacgcggtca gggagaccat cggtccttca ccgtgagcgc ggcatgcacg acagagcagc
     2041 gggcggccac aaaccaccct tcacagccgc gcccgcgccg ataccgcgtt gttcaggagc
     2101 gccatctggt ctctgatttc ggtcagcagc ctgacgtcgg ccggcagttc agcgggtttc
     2161 gcgacatcgg ccttcgcctc ttccttccgc atcagccggt tcatcgccct gacgacgagg
     2221 aacagcacga atgcgacgat gatgaagttg agcgccgccg tcaggaactg accatatccc
     2281 agaaccgcgc ccgctttctt ggcatcggcg tagctcaggc cgctctgcac cttggacgag
     2341 agcggcagat aataattgga gaaatcaagt cccccggtga cggctccgat gaca
//
LOCUS       DATAIQ010000159         2268 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_8540, whole genome shotgun sequence.
ACCESSION   DATAIQ010000159 DATAIQ010000000
VERSION     DATAIQ010000159.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2268)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2268)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2268
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_8540"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..468
                     /locus_tag="VHN20_02765"
     CDS             <1..468
                     /locus_tag="VHN20_02765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724723.1"
                     /translation="GNGEGRGGNGEQRPRFNRGDRQERRDQFGRQDRGERRERFARND
                     QPRQDFQRDEQRQDFNRDDRRRRDEGDEQANGLPAFLTNPVRQQPISVDDDQGGAERS
                     APEAAAEESGEPNGRYGTRPRRRRRRYGNGQGEDGASENGADFGPENAEPSSE"
     gene            complement(557..1351)
                     /locus_tag="VHN20_02770"
     CDS             complement(557..1351)
                     /locus_tag="VHN20_02770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018045320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MOSC N-terminal beta barrel domain-containing
                     protein"
                     /protein_id="HEX2724724.1"
                     /translation="MQLRVASLYRYPVKGLSPERLVQADLVKGGNFPADRLYAIENGP
                     SGFDAAAPQYQPKIKFLMLMRNEALARLKTCYDDATTELSIVDGDREVARGALASEPG
                     RLAIEAFFRRFMPRELRGAPKILAAPDGFRFTDSRSGFVSIINLASVQALEEMVGAPV
                     DPLRFRGNLHVEGLAPWAELDLVGKVLQSPSGLRLKVTKRIERCAATNVDPGTGVRDL
                     EIPKTLMRNLGHIDCGIYAEVLRGGAVGEGTRLDVEPEAQQVLPLT"
     gene            complement(1477..1728)
                     /locus_tag="VHN20_02775"
     CDS             complement(1477..1728)
                     /locus_tag="VHN20_02775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724725.1"
                     /translation="MGFFSRLGGLFSRGGNNELQRSMEKALAMKQEAETSANIPPHHT
                     PHDGMRPANDPHMSDAMRGAEAGFTPQLKRSRVARSGDT"
     gene            complement(1777..2082)
                     /locus_tag="VHN20_02780"
     CDS             complement(1777..2082)
                     /locus_tag="VHN20_02780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724726.1"
                     /translation="MAKTHDPRSEAEKARADLIRNAEMGSATMEAPFMRQPSVTPDTF
                     GEHAEKARRLSGTDQGLEAGGPKPKTSGKPPASQSIVEAEQVADGRDESEPVANQRG"
BASE COUNT          371 a          762 c          768 g          367 t
ORIGIN      
        1 ggaaacggcg aaggccgcgg cggaaacggc gagcagcgcc cgcgcttcaa ccgtggcgac
       61 cgccaggaac ggcgtgacca gttcggtcgc caggatcgcg gggagcgccg tgagcgcttc
      121 gcgcgcaatg accagccgcg ccaggatttc cagcgcgacg agcagcgcca ggatttcaac
      181 cgcgatgacc ggcgccgccg ggatgaaggc gacgagcagg ccaatggtct gccggccttc
      241 ctgaccaacc cggtgcgcca gcagccgatc agcgtggacg acgaccaggg tggcgccgag
      301 cggtcggctc ccgaagcagc cgcggaagag tccggcgagc cgaacgggcg ttacggcacg
      361 cgcccccgcc gccgccgccg ccgctacggc aacggccagg gcgaggacgg tgcgagcgag
      421 aacggcgcgg atttcggtcc ggagaatgcc gagccgtcgt ccgagtgaat tgacctctcg
      481 cggcgtgaca gattcaggct gacgccaacc gtgctctgga cccgatgaaa ggagggcttc
      541 gccctccttt cgttgctcac gtcaacggca gcacctgttg cgcctccggc tcgacgtcga
      601 gccgtgtgcc ctcgcccacc gcgccaccgc gcagcacctc cgcatagata ccgcaatcga
      661 tgtggccgag attgcgcatc agggtcttgg ggatctccag gtcgcggacc ccggtgcccg
      721 gatcgacgtt ggtggccgcg caccgctcga tgcgcttcgt taccttgagc cgcaatcccg
      781 aggggctttg caggactttg ccgaccaggt cgagttcggc ccacggcgcc agcccttcga
      841 catggaggtt gccgcgaaag cgcagcggat cgaccggcgc gccgaccatc tcctcgagcg
      901 cctgcacgct ggcgagattg atgatcgaga cgaagccgct gcgggaatcc gtgaagcgga
      961 agccgtccgg cgccgcgaga atcttgggag cgccacgcag ctcgcgcggc atgaagcgcc
     1021 ggaagaaggc ctcgattgca aggcgcccgg gctcgctcgc caaggcgccg cgggccacct
     1081 cgcggtcccc gtcaacgatg ctgagctcgg tcgtggcatc gtcgtagcac gtcttcagcc
     1141 gcgccagcgc ctcgttgcgc atcagcatca ggaacttgat cttgggctga tactgcggcg
     1201 ctgccgcatc gaagccggat ggcccgttct cgatggcgta aagccggtcg gcggggaagt
     1261 tgccgccctt gacgaggtcg gcctgaacga gccgttcggg cgagaggccc ttgacgggat
     1321 agcgatagag cgaggcgacg cgcagctgca tcgccacgag ttaccaccct ctcccctttc
     1381 gcgggagagg gtagcgaacg aagcgcgccg gaagaagttt acccctctgc gctcgcgcgc
     1441 ggggggggcc ctcccttctg ggagaagccg tgtcgctcaa gtatcgccgc tgcgcgccac
     1501 gcgcgagcgc ttgagctgcg gcgtgaaccc ggcttcggcg ccgcgcatgg cgtcgctcat
     1561 atgcggatcg ttggccgggc gcatgccgtc atgcggagta tggtgcggag gaatgttggc
     1621 gctggtttca gcctcctgct tcatggccag cgccttctcc atgctccgct ggagctcatt
     1681 gttgccgccg cggctgaaca agccgcccag tcgtgaaaag aaacccatag ctgccgcctt
     1741 tcaaaaaaaa tcggttgggt tgtcggacaa cgcgtcctag ccgcgctggt tcgccaccgg
     1801 ctcgctctcg tcgcgcccgt cggccacttg ctcggcctcg acgatcgatt gcgacgcagg
     1861 gggcttgccg gatgttttcg gcttgggccc gccggcttcg agcccctgat ccgtgcccga
     1921 cagccggcgg gccttctcgg cgtgctcacc gaacgtatcg ggcgtcaccg acggctggcg
     1981 catgaacggc gcctccatgg tggcggagcc catctctgca ttgcggatca gatcggcccg
     2041 agccttctcg gcctcggagc gcgggtcatg tgtcttggcc atgcgccctc ctgtcggaca
     2101 aggttaatgc cgccctgctg atcaatgcgg gcgagcgcgc aatcgttccg acgacccttt
     2161 cgtggcaaca aggccacacc tacatacccg gaagaccgat gctcatccga ggtcggtcga
     2221 tccggaggcg tgcggatacg ggctgttgac ggtccgcgcg gcccaaag
//
LOCUS       DATAIQ010000160         1943 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_423806, whole genome shotgun sequence.
ACCESSION   DATAIQ010000160 DATAIQ010000000
VERSION     DATAIQ010000160.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1943)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1943)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1943
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_423806"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(43..627)
                     /gene="idi"
                     /locus_tag="VHN20_02785"
     CDS             complement(43..627)
                     /gene="idi"
                     /locus_tag="VHN20_02785"
                     /EC_number="5.3.3.2"
                     /inference="COORDINATES: protein motif:HMM:NF002995.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004452 - isopentenyl-diphosphate
                     delta-isomerase activity [Evidence IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isopentenyl-diphosphate Delta-isomerase"
                     /protein_id="HEX2724727.1"
                     /translation="MFSPATDQIILVDENNRARGSAEKHAAHRSGLLHRAFSVFLCDA
                     DGRVLLQQRHQSKYHSGGLWANSCCGHPRIRERTKAAARRRVREELGVDVDLTFGFRA
                     RYHTSFANGLHENEIVYVYFGRLDEAPHPDQSEISDVKFVSLADIAREVHRDPDAYAY
                     WFRYYFESHFDEVARGIAQAAGTPSRGAAKRAGA"
     gene            680..1000
                     /locus_tag="VHN20_02790"
     CDS             680..1000
                     /locus_tag="VHN20_02790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724728.1"
                     /translation="MASGRAGNSHGGMLAPGLLDRLLARRAWEGRMTPEPAPPFRGDN
                     LEGPPAGDPGSRGRFTAVAHDHAVAAREHLVRGILAAAAAGFVAAAALVTRAATITRR
                     RRPK"
     gene            1180..>1943
                     /locus_tag="VHN20_02795"
     CDS             1180..>1943
                     /locus_tag="VHN20_02795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724729.1"
                     /translation="MTDAVLPTIPLIDARRDALAAADPAAVRALRDQLFGRFRATADR
                     ALPFVDRVARRWLAGSATPFLAELDRIAAHTGVAGVYAINISYEYGCTTLARSDGPGR
                     APTLRRTLDWPFLGLGRGAVVAHRAGPAGEFLDVTWPGAVGTLSAVAPGRFAAAVNQA
                     PLLRRTRADVLRPLDYARNLARTLARERGMPPLHLLRHVFETAADFGEALALLRHVEL
                     ARPVLFTLTGCAPDQIAVIERRERDATVHLGAGAVA"
BASE COUNT          289 a          691 c          659 g          304 t
ORIGIN      
        1 catgaccttt ttgggcgaag ccgtgtccac ttcgccggat cactaagcgc ctgcgcgctt
       61 cgctgcccca cgggaaggcg tgccggccgc ctgcgcgatc ccgcgagcga cctcatcgaa
      121 gtggctctcg aaatagtagc ggaaccaata ggcataagcg tccggatccc ggtgcacctc
      181 gcgcgcgatg tcggcgagcg agacgaattt gacgtcggat atctccgact ggtcgggatg
      241 cggcgcttcg tccagccgcc cgaaatagac gtagacgatc tcattctcgt gcagcccgtt
      301 ggcgaagctc gtgtggtagc gggcgcgaaa gccgaaggtg agatcgacgt cgaccccgag
      361 ctcctcgcgg acgcgccggc gcgcggcggc tttcgtgcgc tcgcggatgc gcggatgacc
      421 gcagcaggag ttcgcccaca gcccgccgga atggtatttc gactgatggc gctgctgcag
      481 caggacgcgg ccatcggcgt cacaaaggaa gaccgaaaaa gcgcggtgca gcaggcccga
      541 ccggtgcgcg gcatgcttct cggccgagcc gcgggcgcgg ttattctcgt cgaccaggat
      601 gatctgatct gtggcgggtg aaaacattgg ctggcgacct ggagcggctc agcatagtcg
      661 gcaatcccgg gataggggag tggcaagcgg ccgcgccggg aacagccacg gcggcatgct
      721 ggcccccggg ctgctcgacc gcctcctggc gcgacgcgcc tgggaggggc ggatgacgcc
      781 ggagcctgcg ccgccgtttc gcggcgacaa tctcgaggga cctcccgccg gcgaccccgg
      841 gtcgcgcggc cgattcacgg cggtggccca cgatcacgcc gtcgcggccc gggagcatct
      901 cgtgcgcggc atcttggccg cggccgcagc ggggttcgtg gccgcggccg ctctcgtcac
      961 ccgtgccgcc acgatcacaa ggcgccgacg tccgaaatga cagaccgtgc gcaaagagat
     1021 ctcctcctga tcgggttgca ttgccaccgc ggcgtcgccg caataaaacc gcagcagggt
     1081 acgacgcgct gatttgccga gaacggcgcc aggccgttgc cggattgacg catccgtgac
     1141 ggcgccatca aattgcatgt gttgcaggtc gcagatttca tgaccgatgc ggtgctcccg
     1201 acgattcccc tgatcgatgc ccgccgcgac gcgcttgccg ccgccgatcc ggcggcggtg
     1261 cgtgcgctgc gcgaccaact gttcggacgc ttcagggcga ccgctgaccg ggcgctgccc
     1321 ttcgtcgacc gcgtcgcccg gcgctggctg gccggcagcg cgacgccgtt cctggcggaa
     1381 ctcgaccgca tcgccgcgca taccggcgtc gcgggcgtct acgccatcaa catctcctac
     1441 gaatatggct gtacgaccct ggcgcgctcc gatggacccg gccgggcgcc gaccctgcgc
     1501 cgcaccctcg actggccgtt tctcggtctc ggccgcggcg ccgtggttgc ccaccgggcc
     1561 gggcccgccg gcgagtttct tgacgtgaca tggccgggcg ccgtcggaac gctcagcgcc
     1621 gtcgcgccgg gccgctttgc cgccgccgtc aaccaggccc cgctcctgcg ccgaacccgc
     1681 gccgatgtgc tgcggcccct cgactacgcg cgcaacctcg cgcgcacgct cgcgcgcgag
     1741 cgcggcatgc cgccgctgca cctgctgcgc catgtgttcg aaactgcagc cgattttggc
     1801 gaagcgctgg cattgcttcg ccacgtcgag ctggcccgcc ccgtcctgtt cacgctgacc
     1861 ggatgcgcgc ccgatcagat cgcggtgatc gagcgccgcg aacgcgacgc tacggtgcat
     1921 ctcggcgccg gcgccgtcgc caa
//
LOCUS       DATAIQ010000161         1677 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_101031, whole genome shotgun sequence.
ACCESSION   DATAIQ010000161 DATAIQ010000000
VERSION     DATAIQ010000161.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1677)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1677)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1677
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_101031"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..192
                     /locus_tag="VHN20_02800"
     CDS             <1..192
                     /locus_tag="VHN20_02800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019995575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA epimerase"
                     /protein_id="HEX2724730.1"
                     /translation="GGQHHVCFEVPDIEAARAHFEQLGTRILGPTRIGAHGTPIFFLH
                     PKDMGGMLTEIMESPKQAH"
     gene            277..978
                     /gene="pgl"
                     /locus_tag="VHN20_02805"
     CDS             277..978
                     /gene="pgl"
                     /locus_tag="VHN20_02805"
                     /EC_number="3.1.1.31"
                     /inference="COORDINATES: protein motif:HMM:TIGR01198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017057 - 6-phosphogluconolactonase
                     activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphogluconolactonase"
                     /protein_id="HEX2724731.1"
                     /translation="MIEAEWWEYDSVDEMAEAVAGDVGFIIESAVDARDASLIALPGG
                     KTPVPIFAQLAKAKLPWKKVTIIPTDERLVAVNDELSNARLLAGSFMRAGARVVPIGG
                     ENADVDAAGNIADARLQDLPWPPDLVWLGMGSDGHTASIFPGADLQKALDAPKARRAV
                     GVTPEQLPQEAPVARVTLTRASLLSARTLIITITGEEKKELLEQAIADGQSSKLPIGR
                     VLAEAEQPIDIHWAP"
     gene            complement(982..>1677)
                     /gene="fghA"
                     /locus_tag="VHN20_02810"
     CDS             complement(982..>1677)
                     /gene="fghA"
                     /locus_tag="VHN20_02810"
                     /EC_number="3.1.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009031084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018738 - S-formylglutathione hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0046292 - formaldehyde metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-formylglutathione hydrolase"
                     /protein_id="HEX2724732.1"
                     /translation="TYLSGLTCTHANVTDKGEYRAACAELGLAFLAPDTSPRGEGVAD
                     EEGWDIGLGAGFYVDATEAPWSDHYRMWSYVTAELPEVVAGALPALDMARQAITGHSM
                     GGHGALTAALRQPGRYRSVSAFAPIVAPSQVPWGEKAFSRYLGSDRERWRRHDTVALI
                     DAGARLPDLLVDVGEADPFLERELRPELLEQAGQTAGMNATIRRQPGYDHSYFFVSTF
                     MAEHLAWHAARLG"
BASE COUNT          308 a          539 c          565 g          265 t
ORIGIN      
        1 ggcgggcagc atcacgtctg cttcgaagtg ccggacatag aagctgcccg cgcacacttc
       61 gagcagctcg gcacccgcat cctcggcccg acccgcatcg gcgcccatgg cacaccgatc
      121 ttcttcctgc atcctaagga catgggcggc atgctgacgg agatcatgga gtcgccgaag
      181 caggcgcact gaggctgcta cgtgagctgc ggacaaactg cggttgacgc gttggcgcca
      241 gtcctcaaga gcgagcgcga gtgaaggagc agactcgtga tcgaagccga gtggtgggaa
      301 tatgacagcg tcgacgagat ggcggaggcc gtcgcgggtg acgtgggctt catcatcgag
      361 agcgccgttg atgcgcgtga tgcgtcgctg atcgccttgc cgggcggaaa gacgccggtg
      421 ccgatctttg cgcagctcgc caaggccaag ctgccgtgga agaaggtgac catcatccct
      481 accgacgagc ggctggtggc ggtcaacgac gagctcagca acgcgcggct gctggcgggc
      541 agcttcatgc gagcgggtgc acgcgtggtg ccaatcggcg gcgagaatgc cgacgtggat
      601 gcggcaggca atatcgccga cgcgcgtctt caggatctgc cgtggccgcc ggatctcgtc
      661 tggctcggca tgggcagcga tggacatacc gcctccatct tcccaggagc cgacctgcaa
      721 aaggcgctgg atgcacccaa ggcgaggcgg gcggtgggcg tcactcctga gcagctgccg
      781 caggaagcgc cggtcgcgcg cgtgactcta acccgcgctt cgcttctgtc cgcgcgaacc
      841 ctgatcatca ccatcacggg cgaggagaag aaggagctgc tcgagcaggc gatcgccgat
      901 ggtcagtcga gcaagctccc gatcggccgg gtgctggccg aggccgagca gccgatcgac
      961 attcactggg cgccctaagc gtcagcccag ccgggcggcg tgccaggcga ggtgctcggc
     1021 cataaaggtc gacacgaaaa agtagctatg atcgtagccg ggctggcgac gaatggtcgc
     1081 gttcatgccg gcagtctgcc cagcctgttc cagcagttca ggacgaagct cgcgctccag
     1141 gaacggatcg gcctcgccga catccaccag caggtcaggc agtcgggccc cggcgtcgat
     1201 cagtgccacg gtatcgtgtc gccgccagcg ttcccggtca ctgccgagat agcgtgaaaa
     1261 ggccttctcg ccccacggga cttgcgaggg cgcgactatg ggcgcgaaag ccgaaacgct
     1321 gcggtaacgg ccgggctgtc gaagagcggc cgtgagtgcg ccatgtccgc ccatgctgtg
     1381 gccggtgatc gcctgccgag ccatgtcgag cgcgggcaag gcgcccgcca cgacctccgg
     1441 caactcggcg gtcacatagc tccacattct ataatggtcg gaccagggtg cctccgtcgc
     1501 atcgacgtag aagccggcgc caagccctat gtcccaccct tcctcgtcgg caacgccctc
     1561 gcccctcgga ctggtgtcgg gcgccaggaa cgcgagccct agttccgcac acgctgcgcg
     1621 atactcaccc ttgtccgtca cattggcatg ggtgcaggtc aggccggaca gataggt
//
LOCUS       DATAIQ010000162         1888 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_50111, whole genome shotgun sequence.
ACCESSION   DATAIQ010000162 DATAIQ010000000
VERSION     DATAIQ010000162.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1888)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1888)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1888
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_50111"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..327
                     /locus_tag="VHN20_02815"
     CDS             <1..327
                     /locus_tag="VHN20_02815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007758381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YbaN family protein"
                     /protein_id="HEX2724733.1"
                     /translation="GWTFVAVGIVGLFVPLLPGTLFLILASACFARSSPRFEAWLLAH
                     PHLGPPVRAWRATGAIPQRAKVIACASLVVSWLIVLASASALVSAACLAAFVAVGAYL
                     VTRPDA"
     gene            complement(382..>1888)
                     /gene="glmS"
                     /locus_tag="VHN20_02820"
     CDS             complement(382..>1888)
                     /gene="glmS"
                     /locus_tag="VHN20_02820"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015824273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004360 - glutamine-fructose-6-phosphate
                     transaminase (isomerizing) activity [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HEX2724734.1"
                     /translation="KSDLQAKGVVFETETDTEVVAPLVSEEMRRGRSAVEAVEAVLPR
                     LRGAFALAFLFAGQEDLLIGARHGAPLAVGYGEGENYLGSDALALAPFTDEVAYLEDG
                     DWTILSRSSVDIRDVSGKPITRLRQKVPVGTFMVDRGNYRHFMAKEIHEQPEVVGRTL
                     AHYVKFTSGRVEMPDDLGIDWRTINRLNISACGTAYYAGLVAKYWFERLARLPVEIDV
                     ASEFRYREAPIEHGGASLFVSQSGETADTLASLRYVKAQGQRAISVVNVTTSTIARES
                     SAIAPTLAGTEIGVASTKAFTCQLAVLLCLAIAAGRARGALSEADERELVDALIGVPG
                     FMAEAVKREAQIEVLARDLAKATDVLYLGRGTSYPLALEGALKLKEISYIHAEGYAAG
                     ELKHGPIALIDETMPVIVIAPYDAIFEKTVSNMQEVSARGGRIVLITDERGAEAAGLD
                     TFATIVMPGVNPVVAPIVYALPVQMLAYHTAVFMGKDVDQPRNLAKSVTVE"
BASE COUNT          271 a          641 c          648 g          328 t
ORIGIN      
        1 ggctggacgt tcgtggcggt cgggatcgtc gggctgttcg tgcccctgtt gcccggcacg
       61 ttgttcctga tcctcgcctc cgcctgcttc gcgcgctcct cgccgcggtt cgaagcctgg
      121 ctgcttgctc atccgcatct cggaccgccg gtgcgggcct ggcgcgccac tggcgcgatc
      181 ccgcagcggg cgaaggtgat cgcctgcgcc agtctcgtgg tgagctggct catcgttctg
      241 gccagcgctt cggcgctcgt gtcggccgcc tgccttgcgg cgttcgtcgc tgtcggggcg
      301 tatctcgtca cgcgccccga tgcgtgagcg ggaagccgac aggatcgctg ccgacgaccc
      361 gcagctcact ttttcagcag gtcactcgac cgtgacggat ttcgcgaggt tgcgcggctg
      421 gtccacgtct ttgcccatga acacggcggt gtggtaggcc agcatctgca ccggcagcgc
      481 gtagacgatc ggcgcgacga ccggattgac gccgggcatc acgatcgtcg cgaaggtgtc
      541 gaggcccgcc gcctccgcgc cgcgctcgtc ggtgatcagg acgatccgtc ctccccgcgc
      601 ggaaacttcc tgcatgttcg agactgtctt ctcgaagatc gcatcatacg gcgcgatgac
      661 gatcaccggc atggtctcgt cgatcagcgc gatggggccg tgcttgagct cgccggcggc
      721 gtagccctcg gcgtggatgt acgagatttc cttgagcttg agcgcccctt caagcgccag
      781 cggataggac gtgccacgcc cgagatagag aacgtcggta gccttggcga ggtcgcgcgc
      841 cagcacctcg atctgcgctt cacgcttgac cgcttcggcc atgaagccgg gcacgccgat
      901 caaggcgtcg accagctcgc gctcgtcggc ctcggacagc gcgccgcgtg cgcggcccgc
      961 cgcgatcgca aggcacagga gcaccgccag ctggcaggtg aaggccttgg tcgaggcgac
     1021 gccgatttcc gtgccggcca gggtcggcgc gatggcgctg ctctcgcgcg cgatcgtcga
     1081 cgtcgtcacg ttgacgaccg agatggcgcg ctggccttgc gccttgacgt agcgcaggga
     1141 cgccagcgtg tcggcggtct ctccggattg cgagacgaac agcgaggcac cgccgtgctc
     1201 gatcggcgcc tcgcggtagc ggaactcgga ggcgacgtcg atctccaccg gcaggcgcgc
     1261 caggcgctcg aaccagtatt tggcaacgag gccggcataa taggccgtgc cgcaggcgga
     1321 aatgttgagg cggttgatgg tgcgccagtc gatgccgaga tcatcgggca tctcgacgcg
     1381 gccggacgtg aacttgacgt agtgcgcgag cgtccggccg acgacctccg gctgctcgtg
     1441 gatctccttg gccatgaagt ggcggtagtt tccgcggtcg accatgaagg tcccgaccgg
     1501 caccttctgg cgcagccgcg tgatcggctt gccgctcacg tcgcggatgt cgacgctcga
     1561 ccgcgacagg atcgtccagt cgccgtcctc gagatacgcc acctcgtcgg tgaaaggcgc
     1621 cagcgccagg gcgtcggagc cgagatagtt ctcgccctcg ccgtagccga cggcgagcgg
     1681 ggcgccgtga cgggcgccga tcagcaggtc ttcctggccg gcgaacagaa aggccagcgc
     1741 gaaggcgccg cgcagccggg gcagcaccgc ttcgaccgcc tcgaccgccg agcgtccgcg
     1801 gcgcatctcc tcgctgacga gcggggccac gacttcggtg tcggtctcgg tctcgaacac
     1861 cacgcccttc gcctgaaggt cactcttc
//
LOCUS       DATAIQ010000163         1722 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_101174, whole genome shotgun sequence.
ACCESSION   DATAIQ010000163 DATAIQ010000000
VERSION     DATAIQ010000163.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1722)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1722)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1722
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_101174"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1274)
                     /locus_tag="VHN20_02825"
     CDS             complement(<1..1274)
                     /locus_tag="VHN20_02825"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS-domain containing protein"
                     /protein_id="HEX2724735.1"
                     /translation="MVKLALAAVIGCFALAAAYISVLVVERQDALKQVARYNVAWGVS
                     QAVGEFLRLEQRISAFGVPGNLVDKGEIELRLEILVGRAALLEEGEFHDFIRRDPERI
                     AVVTQLKQAIAEVQAFLPELHRPGAVKRAIAVLSPLDAKLAGLASTANLFGAARVSED
                     KDELLRLHQLFSAIAGGLTLCGFVLIALLVAHNQLLSKAHRDLGSLAENLQKASRELE
                     TANAAVHAANGELQAQNETLQSQEFELRRQNDRFDAALNNMSHALCMADAAERVIVCN
                     ERFLSLFELRGSDIEPGTTLSEVIANAARSDSLDHLAQIYGEQASMIHERRAAVFVHG
                     RSDGRTIAVSHRPMAHGGWVATYEDITERKRAESQIAYMAHHDALTDLANRVLFREHI
                     ERTLAQAKRRGDTIAMICLDLDHFKTVNDTLG"
     gene            complement(1421..>1722)
                     /locus_tag="VHN20_02830"
     CDS             complement(1421..>1722)
                     /locus_tag="VHN20_02830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003507019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HEX2724736.1"
                     /translation="WHTGVVTFEGVPLDKLMKHVGAKGQRVVAIALNDYSTEIPIEDF
                     AKYGTILALKRDGEYMPIKDKGPLFIIYPYDSKPELKNQTYYGRSAWQVAKLIVK"
BASE COUNT          266 a          547 c          588 g          321 t
ORIGIN      
        1 tggccgagcg tgtcgttgac cgtcttgaag tggtcgaggt cgaggcagat catcgcgatc
       61 gtgtcgccgc ggcgcttggc ctgcgccagc gtgcgttcga tatgctctcg gaacagaacg
      121 cggttggcga gatccgtgag ggcgtcgtga tgcgccatat aggcgatctg cgactcggcc
      181 cgcttgcgtt ccgtgatgtc ctcgtaggtc gcgacccagc cgccatgcgc catcggccgg
      241 tgcgagaccg cgatcgtgcg gccgtcgctg cggccatgca caaagacggc ggcgcggcgc
      301 tcatggatca tgctggcctg ctcgccgtag atctgcgcaa ggtggtcgag gctgtcgctg
      361 cgcgccgcgt tggcgatgac ctcgctcagc gtcgttcccg gctcaatgtc gctgccccgc
      421 agctcgaaca gcgacaggaa gcgttcgttg cagacgatca cgcgttccgc cgcgtccgcc
      481 atgcacaggg cgtgcgacat gttgttgagg gccgcgtcga agcggtcgtt ctgccggcgc
      541 agctcgaatt cctgcgactg cagcgtttca ttctgtgcct gcagctcgcc attggcggca
      601 tgcaccgccg cgttggcggt ctcgagctcg cgcgaggcct tctggagatt ttcggcgaga
      661 ctgccgagat cgcgatgcgc cttgctgagc agctggttgt gcgcgacgag cagtgcgatc
      721 agcacgaagc cgcacagggt caggcctccg gcgatggcgc tgaacagctg gtgcagccgc
      781 agcagctcgt ccttgtcttc gctgacgcgg gcggctccaa acaggttcgc ggtcgaggcg
      841 agccccgcca gcttggcgtc cagcggtgag aggaccgcga tcgcccgctt gacggcgccg
      901 ggcctgtgca gttccggcag gaatgcctgc acctccgcga tcgcctgctt gagctgcgtg
      961 acgacggcga tgcgctcggg atcgcggcgg atgaagtcgt ggaactcgcc ctcctcgagc
     1021 agcgccgcgc ggccgaccag gatctcgagg cgaagctcga tctcgccctt gtcgacgagg
     1081 tttcccggca cgccgaaggc gctgatgcgc tgctcgaggc gcaggaactc gccgaccgcc
     1141 tggctgacgc cccaggcgac gttgtagcgg gcaacctgct tgagcgcgtc ctgccgctcg
     1201 acgacgagga ccgagatata cgccgccgcc agcgcgaagc agccgatgac ggctgccagc
     1261 gccagcttca ccatgcgcag ggatatcgat cgtttgtgct ggggcatgat gcgaccagag
     1321 cgcgttgccg acgtcggcga gggtgggatt tgccgacgca gcatcacgtg aaaccggaaa
     1381 ggtcagcgcg ggatcgctac cgcgatcccg cgcaccaggg ctatttcacg atgagcttcg
     1441 cgacctgcca ggccgagcgg ccgtaatagg tctggttctt cagctccggc ttgctgtcat
     1501 acgggtagat gatgaacagc ggccccttgt ccttgatcgg catgtattcg ccgtcgcgct
     1561 tgagcgccag gatggtcccg tatttggcaa aatcctcgat cgggatttcc gtgctgtagt
     1621 cgttgagcgc gattgcgacg acgcgctgac ccttggcccc gacgtgcttc atcagcttgt
     1681 cgagcggcac gccctcgaaa gtgacgacgc cggtgtgcca gg
//
LOCUS       DATAIQ010000164         2839 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_101212, whole genome shotgun sequence.
ACCESSION   DATAIQ010000164 DATAIQ010000000
VERSION     DATAIQ010000164.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2839)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2839)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2839
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_101212"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1860)
                     /locus_tag="VHN20_02835"
     CDS             complement(<1..1860)
                     /locus_tag="VHN20_02835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018262147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase family protein"
                     /protein_id="HEX2724737.1"
                     /translation="MAEAALKQPQSAGAGQKDAVRKVLDQVKRDGRTSLTAPEGKLVC
                     DAYGIPVPKEGVAKSAQDAAKLADGMGYPVVLKIVSPDILHKTEAGGVLVGLKSADEV
                     SKGYDTILANAKKYKADAKIDGVQVQQMLKGGTEVIVGSISDGSFGKLVAFGLGGVLV
                     EVLKDITFRLAPATRADALSMLDGIQAAEMLKGVRGGEAVSREALADVIVKVSQLVSD
                     FPEIVELDLNPVFATAKDAIAADVRIVVDFEAKEQRYRPPHDDIVRAMNRIMRPKGLA
                     VIGASAEDGKIGNSVMKNLINGGYKGQIYPIHPKADEILGYKAYKSVKDVPGEIDVAV
                     FAIPAKFVAQALTECGEKKIPGAVLIPSGFAETGNVEGQKELQEIGRKYDIRLMGPNI
                     YGFYYTPENLCATFCTAYDVKGKVALSSQSGGIGMAIIGFSRSAKMGVSAIVGLGNKS
                     DIDEDDLLTFFEQDDNTQVIAQHCEDLKDGRAFAEVAKRVSKKKPVIVLKAGRTSAGA
                     KAASSHTGALAGNDKIYEDVLKQSGVIRARSLRHMLETARGIQVLPTPKGENVVIITG
                     AGGSGVLLSDACVDNDLKLMAMPPDLDEAFKKFIPPFGASGNPVDITGGEPPTT"
     gene            2213..>2839
                     /locus_tag="VHN20_02840"
     CDS             2213..>2839
                     /locus_tag="VHN20_02840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020185395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEX2724738.1"
                     /translation="MNEAQTKWPPRDEADRSLVIERIPAEQSFKSKAYAALKEAITNL
                     DIYRATEPVMLDERELSERLGVSRTPIREAVAMLEKEGFVRTVPRRGILVVRKTKREI
                     IEMIQAWAALESMAARLITLNASDSEIGALRALFDAFGREHVALDHLDEYSSANINFH
                     QSLIRMSGSSVLAAMTDNLLLHVKAIRHRTIFESDRAQRSIKDHRAIIE"
BASE COUNT          440 a          929 c          948 g          522 t
ORIGIN      
        1 cgtggtcggc ggctcgccgc cggtgatgtc gaccgggttg ccggaagcgc cgaacggcgg
       61 aatgaacttc ttgaacgcct cgtcgagatc gggcggcatc gccatcagct tgaggtcgtt
      121 gtcgacgcag gcgtccgaca gaagcacgcc cgagccgccg gcgccggtga tgatgacgac
      181 gttctcgccc ttcggcgtcg gcagcacctg gatgccgcgc gccgtctcga gcatgtgccg
      241 caggctgcgg gcgcggatca cgcccgactg cttgagcacg tcctcgtaga tcttgtcgtt
      301 gccggcgagg gcgccggtgt gtgacgacgc cgccttggcg ccggccgagg tgcggcccgc
      361 cttgagcacg atcaccggct tcttcttcga gacgcgcttg gcgacctcgg caaaggcgcg
      421 gccgtccttc aggtcctcgc aatgctgcgc gatcacctgc gtgttgtcgt cctgctcgaa
      481 gaaggtgagc agatcgtcct cgtcgatgtc cgacttgttg ccgaggccga caatcgccga
      541 gacgcccatc ttggcggagc ggctgaagcc gatgatggcc atgccgatgc cgcccgattg
      601 cgacgacagc gccaccttgc ccttcacgtc ataggccgtg cagaaggtcg cgcacaggtt
      661 ttccggcgtg tagtagaagc cgtagatgtt gggccccatc aggcggatgt cgtatttgcg
      721 cccgatctcc tggagctcct tctggccttc gacattgccg gtctcggcga agcccgacgg
      781 gatcagcacc gcgcccggga tcttcttctc gccgcactcg gtcaaggcct gcgcgacgaa
      841 cttcgccggg atggcgaaca ccgccacgtc gatctcgccg ggcacgtcct tgaccgactt
      901 gtaggccttg tagccaagga tctcgtcggc cttcgggtgg atcggataga tctgcccctt
      961 gtagccgccg ttgatcaggt tcttcatcac cgagttgccg atcttgccgt cctcggcgga
     1021 ggcgccgatc accgcaagac ctttgggccg catgatgcgg ttcatggcgc gcacgatgtc
     1081 gtcgtgcggc ggccggtagc gctgctcctt ggcctcgaag tcgacgacga tgcgcacgtc
     1141 ggcggcgatg gcgtccttgg cggtggcgaa gaccgggttg aggtcgagct cgacgatctc
     1201 cgggaaatcg ctgacgagct gcgaaacctt gacgatcacg tcggcgagcg cctcgcggct
     1261 gacggcctcg ccgccgcgca cgcccttgag catctcggcg gcctggatgc cgtcgagcat
     1321 cgacagagcg tcggcgcgcg tcgccggcgc caggcggaag gtgatgtcct tcagcacctc
     1381 gaccagcacg ccgccgaggc cgaaggcgac cagcttgccg aaggagccgt cgctgatcga
     1441 gccgacgatc acctcggtgc cgcccttgag catctgctgc acctggacgc cgtcgatctt
     1501 ggcatcggcc ttgtatttct tggcattcgc caggatcgtg tcgtagccct tggagacctc
     1561 gtcggcgctc ttgaggccga ccagcacgcc gccggcttcc gtcttgtgga ggatgtcggg
     1621 cgagacgatc ttcagcacca ccgggtagcc catgccgtcg gcgagcttgg cggcgtcctg
     1681 ggccgacttg gccacgcctt ccttcgggac cgggatgcca taggcgtcgc agacgagctt
     1741 gccttccggc gcggtcaggc tggtgcggcc gtcgcgcttg acctggtcga ggaccttgcg
     1801 gacggcatcc ttctggcctg ctcccgcgga ctgcggctgc ttcagtgctg cttctgccat
     1861 gtgtgtctcc tcctggggcg cccgctgcgg cgggtcttga gacgaggcct ggagcgcccg
     1921 aacaattcgt gatgcttgag tggtgcctgg gacaagcccg tccgtgggac gaaaaggtct
     1981 tcgcggcggg cacgatgctg ggcgtgggac ggacgagcgt ccgtcattct cctccgcggg
     2041 gactgtcaac cgggggcgga tggtatttgg catgccacag gcccgtcaag tggcatttca
     2101 agggactttt ctcctggagc gggcggcttg ttgacatcct ggtatttggc atgccaatgt
     2161 ccgccacggc cggcctgaaa cggctccgcg gcccgtccgc cgaggacttt gtgtgaacga
     2221 agcgcagacc aaatggcccc cgcgcgacga ggctgatcgc agcctcgtga tcgagcgcat
     2281 cccggccgag cagagcttca agagcaaggc ttacgccgcc ctcaaggagg ccatcaccaa
     2341 cctcgacatc taccgcgcga ccgagcccgt gatgctcgac gagcgcgagc tgtcggaacg
     2401 gctcggcgtc agccgcacgc cgatccgcga ggcggtggcg atgctggaga aggaggggtt
     2461 cgtgcgcacc gtgccgcggc gcggcattct cgtggtgcgc aagaccaagc gcgagatcat
     2521 cgagatgatc caggcctggg cggcgctgga gagcatggcg gcgcggctga tcacgctgaa
     2581 tgccagcgat tccgagatcg gcgcgctgcg cgcccttttc gacgccttcg ggcgcgagca
     2641 cgtcgccctc gatcatctcg acgaatattc ctcggcgaac atcaacttcc accagtcgct
     2701 catccgcatg agcggatcga gcgtgctcgc cgcgatgacc gacaacctgc tgctgcacgt
     2761 caaggcgatc cgccaccgca cgatcttcga gagcgaccgc gcgcagcgct cgatcaagga
     2821 tcacagggcg atcatcgag
//
LOCUS       DATAIQ010000165         2215 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_424151, whole genome shotgun sequence.
ACCESSION   DATAIQ010000165 DATAIQ010000000
VERSION     DATAIQ010000165.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2215)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2215)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2215
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_424151"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..602
                     /locus_tag="VHN20_02845"
     CDS             <1..602
                     /locus_tag="VHN20_02845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012253918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="RNA polymerase sigma-54 factor"
                     /protein_id="HEX2724739.1"
                     /translation="IELNADTLPRVLVNQTYYATVSRTVRNETEKTFLSDCLQNANWL
                     ARSLEQRAKTILKVASEIVRQQDGFFVHGVSHLRPLNLKTVAEAIGMHESTVSRVTSN
                     KAIGTSRGTFEMKYFFTAAIPGAAGVDAHSSEAVRHRIKQLIDGEPAGDILSDDALVQ
                     KLKAEGIDIARRTVAKYRESLRIPSSVERRREKQSRAAR"
     gene            880..1455
                     /gene="raiA"
                     /locus_tag="VHN20_02850"
     CDS             880..1455
                     /gene="raiA"
                     /locus_tag="VHN20_02850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018046025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_component: GO:0022626 - cytosolic ribosome [Evidence
                     IEA];
                     GO_function: GO:0045182 - translation regulator activity
                     [Evidence IEA];
                     GO_process: GO:0009386 - translational attenuation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated translation inhibitor RaiA"
                     /protein_id="HEX2724740.1"
                     /translation="MGLRVSGKNMDIGDALRQQVESRLSGTVAKYFDGSHSGHVTVAR
                     DGAGFRTECVLHLSSGVTLEASGAAHDAHASFEQTADRIEKRLRRYKRRLKDRQGGAQ
                     RPAEAVDSAYAVLEPPPEDEHDGGEFHPVVIAETTRPLHRFSVSEAVVELDLTGAPAI
                     VFLHAGTGRVNVVYRRSDGMIGWIDPPAERA"
     gene            1526..1990
                     /gene="ptsN"
                     /locus_tag="VHN20_02855"
     CDS             1526..1990
                     /gene="ptsN"
                     /locus_tag="VHN20_02855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012319935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008982 -
                     protein-N(PI)-phosphohistidine-sugar phosphotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS IIA-like nitrogen regulatory protein PtsN"
                     /protein_id="HEX2724741.1"
                     /translation="MPLRTFLSPEAVAPALKVNSKKQALHELSALSGRLIGRSPHEIF
                     EPLLQRERLGSTGVGDGIAIPHCKLPRLDRLFGLVARLERPIDFDALDGQPVDIMFLL
                     LAPEGAGADHLKALARVARVLRQPGLVDRLRMARDANALYAVLIEASTPKAA"
     gene            complement(1999..>2215)
                     /locus_tag="VHN20_02860"
     CDS             complement(1999..>2215)
                     /locus_tag="VHN20_02860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012334638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter
                     substrate-binding protein PotF"
                     /protein_id="HEX2724742.1"
                     /translation="MRPEVAAANTNFVSYASGNLAAKPFVNREILENPGVYPDDATFK
                     RLFTNTAYDERSQRTLTRLWTRVKTGR"
BASE COUNT          379 a          744 c          726 g          366 t
ORIGIN      
        1 atatagagct caacgccgac accttgccgc gcgtgctcgt caaccagacc tattacgcga
       61 ccgtgtcgcg cacggtgcgc aacgagaccg agaagacgtt cctgagcgac tgcctgcaga
      121 acgccaactg gctcgcgcgc agcctcgagc agcgtgccaa gaccattctg aaagtggcga
      181 gcgagatcgt gcgccagcag gacggcttct tcgtgcatgg cgtctcgcat ctgcggccgc
      241 tcaacctcaa gaccgtcgcc gaggcgatcg gcatgcatga atcgacggtg tcgcgggtga
      301 cctcgaacaa ggccatcggc acgagccgcg gcaccttcga gatgaaatac ttctttacag
      361 ctgcgattcc cggtgcggcc ggcgtcgacg cgcattcctc cgaggctgtc cgccatcgca
      421 tcaagcagtt gatcgacggc gagcccgccg gcgatatcct gtcggatgac gccctcgttc
      481 agaagctcaa ggccgaaggc atcgacatcg cccggcgcac cgtcgccaaa tatcgagaat
      541 cgttgcggat tccgtcctcg gtcgagcgcc ggcgcgagaa gcagtcgcgc gccgcgcgct
      601 gaacaccgtc cggcaaagcg agcccacctt gccggcaagg cgacgcggct gaggccccgc
      661 cccacgacgt cggaaccact ttgtcgacga gaccgttgcg ggccagggac aaccggtggg
      721 attgcccggc atgccacggc ggcaaatccg cttgagaaga gcctgcgtga gaacggttgg
      781 ccgcgacgcg atgccgatcc gatcgcgctg cgcgttgact tgacgcgtga tccttcgcac
      841 tgtcgtggac agtttcgcac cgtcaggagg cgcaccgaga tgggcctgcg agtttccggc
      901 aagaacatgg acatcggcga cgctttgcgt cagcaggtgg agtcacgcct gtccggcacg
      961 gtggcgaaat atttcgacgg cagccactcc ggacacgtca ccgtcgcccg cgacggcgcc
     1021 gggttccgca ccgaatgcgt cctgcacctc agctccggcg tgaccctcga agcgtcgggc
     1081 gcggcccacg acgcgcatgc gagcttcgaa cagacggccg accgcatcga gaagcgcctg
     1141 cgccgttaca agcgtcgcct caaggaccgg cagggcgggg cgcagcggcc ggcggaagcc
     1201 gtcgacagcg cctatgcggt tctcgagccg ccgcccgagg acgagcacga cggcggcgag
     1261 tttcacccgg tggtgatcgc cgagaccacc aggcccttgc atcgcttctc tgtgagtgaa
     1321 gcggttgtgg agcttgatct gaccggggcg ccggctatcg ttttcctgca tgctggcacg
     1381 ggccgcgtga acgtcgtata tcgccggagc gacgggatga tcggatggat cgatccgccc
     1441 gcggagcgag cctgacgccg gacattggcc cgcggcttgc ttgaacgtgg aagcgccgcc
     1501 ttcgcgacaa cgacgtcgag ctgttatgcc cctgcgaacc ttcctcagcc ccgaggctgt
     1561 tgcgccggcc ttgaaggtca acagcaagaa gcaggcgctg cacgagttga gcgccctctc
     1621 cgggcgactg atcggccgta gcccgcacga gattttcgaa cctttgctgc aacgcgagcg
     1681 cctcggctcg acgggcgtcg gcgacggcat tgccatcccg cactgcaagc ttccccgcct
     1741 cgaccggctg ttcggcctgg tggcccgcct agagcgcccg atcgatttcg atgccctcga
     1801 cggccagccg gtcgacatca tgttcctgct gctggcgccg gaaggcgccg gggccgatca
     1861 cctcaaggct ctcgcccggg tcgcccgcgt gctgcgccag ccggggctgg ttgaccggct
     1921 gcgcatggcc cgtgatgcca acgccctcta cgcggttctg atcgaggcct cgacgccgaa
     1981 ggcggcgtaa gcagcagctt accgtcccgt cttcacgcgg gtccacagcc gcgtgagcgt
     2041 gcgctgcgag cgttcgtcgt aggcggtgtt ggtgaacagg cgcttgaagg tggcgtcgtc
     2101 cggatagacc ccgggattct cgaggatctc gcgattgacg aacggcttcg ccgcgagatt
     2161 gccgctcgca taggagacga agttggtgtt cgccgccgcc acctcgggcc gcatc
//
LOCUS       DATAIQ010000166         2262 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_50173, whole genome shotgun sequence.
ACCESSION   DATAIQ010000166 DATAIQ010000000
VERSION     DATAIQ010000166.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2262)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2262)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2262
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_50173"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1720
                     /locus_tag="VHN20_02865"
     CDS             <1..1720
                     /locus_tag="VHN20_02865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycoside hydrolase family 2 TIM barrel-domain
                     containing protein"
                     /protein_id="HEX2724743.1"
                     /translation="NGGLSTDRSRSRKEKLLKGIVDRDFNHPSIIIWTIINENWGVDL
                     VHDPDHRDWLKRTFAWLKAYDPSRLVVDNSPLAPSFHVESDIADYHFYAAIPDHRDSW
                     DNFVDELSDRASWLYSPHGDAVITGKEPLMCSEFGNWGLPYPKDLRDENGEEPWWFET
                     GHDWGDGVMYAHGVENRFTDWSLDRVFGDLRHFVIAAQWQQFRALKYQIEAMRRKPNL
                     SGYVITELHDCHWESNGLLDMKRNPRVFHELFHIINADTVVVPRWQRLSYWAGETAAF
                     EVVVAHGAGPVLEGAQLEVSIAGDVKRLSLPRMEAGQVVDLGTVELRVPSLTAPDVRR
                     VVFELRRPDGMRIAVNHLDIAVHPERDAGQRARQLVWSPDTAIRERFKALGYAAAHDL
                     DEATLIVSATHDDAIAAQVRQGSSLLLLADENMALYPFFPHWQNVRVQSRSGTHWGGD
                     WASSFSWLRRSGHFARLPSGPLLDETFDRVIPSHVISGCNLLDFQARVFGGLVVGWIH
                     KPVGLGIERSYGRGRLVASTLRVLRDDPGLDPTATILTDALVDLALEARAQRLEEAVR
                     AAEAAA"
     gene            complement(2005..>2262)
                     /locus_tag="VHN20_02870"
     CDS             complement(2005..>2262)
                     /locus_tag="VHN20_02870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008767 - UDP-galactopyranose mutase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-galactopyranose mutase"
                     /protein_id="HEX2724744.1"
                     /translation="PSAVGDPYYPIPRAENQELFKQYEKLAIATPNVWFVGRLATYRY
                     YNMDQVVGQALATYRRINEALPVEADTSSVRMVKSPAALAS"
BASE COUNT          364 a          765 c          741 g          392 t
ORIGIN      
        1 gaacgggggc ctgtcgaccg accgctcgcg cagccgcaag gagaagctcc tcaagggtat
       61 cgtcgaccgc gacttcaacc atccgtcgat catcatctgg acgatcatca acgagaactg
      121 gggcgtggac ctcgtccacg atcccgatca tcgcgactgg ctgaagcgca ccttcgcctg
      181 gctcaaggcc tacgatccgt cgcgtctcgt ggtcgacaat tcgccgctgg cgccgagctt
      241 ccacgtggag tcggatatcg ccgattatca tttctacgcg gcgatcccag accatcgcga
      301 cagttgggac aacttcgtcg atgagctttc cgaccgtgcc tcgtggctct acagcccgca
      361 cggcgacgcc gtgatcaccg gcaaggagcc gctcatgtgc tccgagttcg gcaactgggg
      421 cctgccgtat ccgaaggacc tgcgcgacga gaacggcgag gagccttggt ggttcgagac
      481 cggccacgat tggggcgacg gcgtgatgta cgcgcacggc gtcgagaacc gcttcacaga
      541 ctggagcctc gatcgcgtgt tcggcgatct gcgccatttc gtgatcgcgg cccaatggca
      601 gcagttccgg gcgctgaaat atcagatcga ggcgatgcga cggaagccga acctctccgg
      661 ctatgtcatc accgagctgc acgactgcca ttgggagtcg aacgggctgc tcgacatgaa
      721 gcgcaatccg cgcgtgttcc acgagctgtt ccacatcatc aatgccgaca ccgtcgtcgt
      781 gccgcgttgg cagcgcctgt cctattgggc cggcgagacc gcggctttcg aggtcgtggt
      841 cgcgcatggc gccgggcctg ttcttgaagg cgcccagctc gaagtctcaa tcgccggcga
      901 cgtgaagcga ttgtcgctgc cgcgcatgga agccggacag gtcgtcgacc tcggcaccgt
      961 cgaattgcgg gtaccgagcc ttacggcgcc ggatgtccgg cgcgtcgtgt tcgagctgcg
     1021 ccgccctgac ggaatgcgga tcgcggtcaa ccacctcgac attgcggttc atcccgagcg
     1081 ggacgcaggc cagcgcgccc ggcagctggt ctggtcgccc gacacggcga tccgcgagcg
     1141 cttcaaagcc ttgggttatg ccgcggcgca cgacctggac gaggcgacgc tgatcgtctc
     1201 cgccacgcac gacgatgcca tcgccgcgca ggtccggcag ggatcgagcc tgctgctgct
     1261 ggccgacgag aacatggcgc tctatccctt ctttccgcat tggcagaacg tcagggtcca
     1321 gagccgcagc ggcacccatt ggggcggcga ctgggcgtcc tcgttctcgt ggctgcggcg
     1381 ctccgggcat ttcgcgcggc tgccgagcgg gccgctgctc gacgagacct tcgaccgcgt
     1441 gatcccgtcg catgtgatct cgggctgcaa ccttctcgac ttccaggcgc gcgtgttcgg
     1501 cggcctggtg gtcggctgga tccacaagcc cgtcggcctc ggcatcgagc gctcgtacgg
     1561 ccgcggccgc ctagtcgcgt cgacgttgcg cgtgctgcgc gacgaccctg gtctcgaccc
     1621 gacggccacg attctcaccg acgcgctcgt cgacctcgct ctcgaggcgc gcgcgcaacg
     1681 cctcgaggaa gccgtccgcg ccgccgaggc cgccgcgtaa aggcctctcg ccggagcggg
     1741 tcggctcaac gctcatcctg ctgtactgtg agccgaaggc gagcctcata ggccgccgac
     1801 cgttcgacgt tcatatcctc aagcggagaa caggcccacg gcgggtgctt tgaggcgagg
     1861 tttgtcgccc gtcgttcggc ggtcatccaa ccgccgccgc agctgcgccc tggcgccgcg
     1921 cacagcgtga gacatgggtt caccgactag gcgggcgccg cacgggcagt gctcgggcca
     1981 cccgaccccg gcccgcgcct gccttcaaga ggcgagcgct gccggcgact tcaccatgcg
     2041 gaccgacgac gtgtcggcct cgaccggcaa agcctcgttg atgcgccgat aggtggcgag
     2101 cgcctgaccg acgacctgat ccatgttgta gtagcggtag gtggcgagcc gtcccacgaa
     2161 ccagacgttc ggcgtggcga tagcgagctt ctcgtactgc ttgaacagct cctggttctc
     2221 cgcccgcggg atcggatagt aagggtcgcc cacggcggaa gg
//
LOCUS       DATAIQ010000167         3587 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_101240, whole genome shotgun sequence.
ACCESSION   DATAIQ010000167 DATAIQ010000000
VERSION     DATAIQ010000167.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3587)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3587)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3587
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_101240"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..185
                     /locus_tag="VHN20_02875"
     CDS             <1..185
                     /locus_tag="VHN20_02875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724745.1"
                     /translation="WQEHMTKGRLRIYQTPCPSVGFGACDAPFPTIFLAHQFSSFELF
                     RRTGASDWYMDPVNIR"
     gene            complement(367..1215)
                     /locus_tag="VHN20_02880"
     CDS             complement(367..1215)
                     /locus_tag="VHN20_02880"
                     /inference="COORDINATES: protein motif:HMM:NF013706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEX2724746.1"
                     /translation="MKFATLRTGQVVAETKDGYRRVDAASMIDVIENYPSKLKLSGEP
                     IALPEALAPPIARPSKIWAAAGNFYRGVDAKAPDGKSSRGETTTLTKEELLHSIFLKP
                     PSAIIGPGDSIVIPPGAGGVFPEVELCVVIGKRCRGLTVEEAASAIFGYSILLDVTAR
                     NYGPEKSGKTMRCIRKGYDTFAPFGPGITTRDEIPHPDRVQMNLRVNGELRQSATTET
                     MINGVYELVSFLSKVCTLEPGDLISTGTPDSPRHQQRLVDGDTLVAEIEGIGKMKLGI
                     RASDEA"
     gene            complement(1238..2500)
                     /locus_tag="VHN20_02885"
     CDS             complement(1238..2500)
                     /locus_tag="VHN20_02885"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2724747.1"
                     /translation="MEVPGCHEVTAPALKDRDGSAGPVRQGQLTVRHLEKSFASREEV
                     VQVIRDVSFTIEPGQFFTLLGPSGCGKSTTLRCIAGLERADRGHIAVGGRVLADSETG
                     AFVPASDRDFGMVFQSYAIWPHMTVSQNVAFPLHANRRRHRLSRKEIADRVEEALSMV
                     RLDTLGGRIATKLSGGQQQRLALARALITRPDLLLLDEPLSNLDAGLRDHMRSELRAM
                     QLRTGVTTLYVTHDQAEAFSMSDVIAVMDSGVLVQQGSPHDIYWRPSTAFVATFVGRT
                     NLLSIKRLPAQDGTGVVSVETSIGPILVRAESNRQIGAADSVVIRPEDLQISREAPPA
                     GRGNVFAGRVRRPMFLGENVELEIEIGGEVLMSQQHARLQFATGDKVYVELPVDRCVV
                     VSGAAAGVGSHVRGTPDGHATLARNAAE"
     gene            complement(2473..>3587)
                     /locus_tag="VHN20_02890"
     CDS             complement(2473..>3587)
                     /locus_tag="VHN20_02890"
                     /inference="COORDINATES: protein motif:HMM:NF024739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX2724748.1"
                     /translation="RENSGRSMMNMLKCLLVAACGAALLAPAASFGADKNAAGFVSYA
                     SHDDLVKEARAESGTLTVTFAQPQSAVDEIVKLFIAKYGFAKAVGQEVGNSDARLLLE
                     LKAGTHKSDVVHLEEELGLANYYPHLYKVDLLGMAEKKVIDLPVKMINPKQANVAALG
                     SALAGVSYNSKVLPADLIPKSYEDLLNPKLKNSGLLWVDVSQASGLAALFVVWGKDKV
                     IDYTTKLGEQRPVWTTGATRSVTAMAAGEYAIGSLNHYHSVIRIREQRKAPHLEAVLL
                     EPVPVRLNNILGINHKTTMPATAALFIEFMATDKVQEIFDRAGPIKASVFKTGSLPNK
                     LVEGKKIAFVGWDDVDEIEPLQKRIFESWKFPVATK"
BASE COUNT          590 a         1164 c         1155 g          678 t
ORIGIN      
        1 actggcaaga gcacatgaca aaggggcgct tgcggattta tcagacgcca tgccccagcg
       61 tcgggttcgg ggcctgcgac gcgcctttcc cgacgatctt cctggcgcat cagttttcgt
      121 cgttcgaact gttccggcgc acaggcgcca gcgactggta tatggacccg gtgaacatac
      181 gataagggag ggtgacggtg gcgcccatgc gcaccgtcac tggagtatga gccggcaaag
      241 tgggcatcgc tttgccgaaa aaggcttgtc ccggacatga tccgggatca tgcggcgcaa
      301 agagaaggag agcatgatcg attcaatctg aattgatcat gctctaaggc ggaggcccgg
      361 gcctctctac gcctcgtcag aggcgcggat gccgagcttc atcttgccga tcccttcgat
      421 ctcggcgacc agcgtatcgc cgtccaccag cctttgctga tgcctgggcg agtccggggt
      481 cccggtcgag atcagatcgc cgggctccag cgtgcagacc ttcgagagga agctcacgag
      541 ctcatagacg ccgttgatca tcgtctcggt ggtcgcgctt tggcgcagct cgccattcac
      601 ccgcaggttc atctgcacgc ggtccggatg cggaatttca tcgcgcgtgg tgatgcctgg
      661 cccgaacggc gcgaacgtgt cgtagccctt gcggatgcag cgcatcgtct tgcccgattt
      721 ctcggggccg tagttgcgcg cggtgacgtc gaggaggatg gagtaaccaa agatcgccga
      781 cgccgcctct tcgaccgtga gtccccggca ccgcttgccg atgacgacgc agagctcgac
      841 ctccgggaac acgccgccgg cccccggcgg gatgacgatg ctgtcgccgg gcccgatgat
      901 cgcggacggc ggcttcagga agatcgagtg gaggagctct tccttcgtca acgtcgtcgt
      961 ctcgccccgg ctgctcttgc cgtccggggc cttcgcatcg acgccccgat agaagttgcc
     1021 ggccgcggcc cagatcttcg acggccgtgc gatcggcggg gccagcgcct cgggcagcgc
     1081 gataggctcg ccagatagct tcagctttga cggataattc tcgatgacat cgatcatcga
     1141 tgcggcgtcg accctgcggt agccgtcctt tgtctcggca accacctggc ccgtgcgcaa
     1201 ggtcgcgaat ttcactgtcg gtttcccttc cctgatctca ttcggctgcg ttcctggcca
     1261 acgtcgcgtg gccgtccggc gtcccacgga cgtgagaccc gacccctgcc gcggcgccgg
     1321 agacgacgac gcagcggtct acaggcagct cgacatagac cttgtcaccg gtggcgaact
     1381 ggagccgcgc gtgttgctgg ctcatcagga cctcgccgcc aatctcgatc tcgagctcga
     1441 cgttctcgcc aaggaacatg gggcggcgca cgcgcccggc aaatacgttg ccacgcccgg
     1501 ccggcggcgc ctccctcgag atctgcagat cctcggggcg gatgacgacg gaatcggcgg
     1561 cgccgatctg ccggttgctt tcggcccgca ccaggatcgg cccgatgctg gtctcgaccg
     1621 agacgacacc cgtcccgtcc tgcgctggta accgtttgat cgagagcagg ttggttcgcc
     1681 cgacaaaggt ggcgacgaag gcggtgctgg gacgccagta gatgtcgtgc ggggacccct
     1741 gctggaccag aacgcccgaa tccatcacgg cgatgacgtc cgacatgctg aatgcttccg
     1801 cctgatcgtg cgtcacatac agcgtcgtca cgcccgtccg gagctgcatc gcgcgcagct
     1861 cgctgcgcat gtggtcgcgc aagcccgcgt cgaggttgga caagggctca tcgagcaaca
     1921 gcaggtcggg gcgcgtgatc agcgcgcgcg cgagcgccag ccgctgctgc tgaccaccgg
     1981 acagttttgt ggcgatccgc cccccgagcg tgtcaagccg aaccatgctt agcgcttcct
     2041 cgacgcgatc ggcgatctcc ttgcgcgaca gccgatggcg gcgacgattg gcgtgcagcg
     2101 ggaaagcgac gttctgggac acggtcatgt gcggccagat cgcgtagctc tggaacacca
     2161 tgccgaagtc gcggtccgac gccggcacga acgcgccggt ctcggaatcg gcgagcaccc
     2221 ggccgcctac cgcgatgtgg ccgcgatcgg ctcgctccag acctgcgatg cagcgcagcg
     2281 tcgtgctctt tccgcagccg gacggaccca gcaaggtgaa gaactgcccc ggttcgatgg
     2341 tgaaggagac gtccctgatt acctggacga cttcctcgcg cgatgcgaac gacttttcga
     2401 ggtgcctgac cgtcagttgc ccttgacgga ccggccctgc cgatccgtcc cggtctttta
     2461 gcgctggagc ggtcacttcg tggcaaccgg gaacttccac gactcgaaga tccgcttttg
     2521 cagcggctcg atctcgtcga cgtcgtccca gccgacaaag gcgatcttct tgccctcgac
     2581 cagcttgttc ggcagcgagc ccgtcttgaa caccgacgcc ttgatggggc cggcgcggtc
     2641 gaagatctcc tgaaccttgt cggtggccat gaactcgatg aacaaggccg ccgtcgccgg
     2701 catagtcgtc ttgtggttga tgcccaggat gttgttgagc cggaccggca ccggctcgag
     2761 cagcaccgct tccagatgcg gtgccttgcg ctgctcgcgg atcctgatca ccgagtggta
     2821 gtggttgagc gagccgatgg cgtattcgcc ggcggccatg gcagtcaccg agcgcgtggc
     2881 gcccgtcgtc cataccggcc gctgctcgcc gagcttggtc gtgtagtcga tgaccttgtc
     2941 cttcccccac acgacgaaca gcgcggcgag gccggatgcc tgcgagacgt cgacccagag
     3001 caggccgctg ttcttcagct tgggattgag caggtcctcg taggatttgg gtatgagatc
     3061 ggccggcagg accttggagt tgtacgagac ccccgccagc gcgctgccga gcgcggccac
     3121 gttggcctgc tttgggttga tcatcttgac cggcaggtcg atgaccttct tctcggccat
     3181 gccgagcagg tccaccttgt acaagtgcgg atagtagttg gcgaggccga gctcctcctc
     3241 gaggtggacg acgtcgctct tgtgggttcc ggccttgagc tcgaggagca gcctcgcgtc
     3301 ggagttgccg acctcctgcc cgacggcttt ggcgaagccg tatttcgcga tgaacagctt
     3361 gacgatctcg tcgacggcgg actgcggctg ggcgaacgtc acggtgagcg tcccggattc
     3421 cgcccgcgcc tccttcacga gatcgtcgtg gctggcatag ctcacgaagc cggccgcatt
     3481 cttgtccgcg ccgaagcttg ccgcgggcgc gagcagcgcc gcgccgcagg ccgcgacgag
     3541 caagcatttc aacatgttca tcatggacct ccctgagttc tccctgt
//
LOCUS       DATAIQ010000168         2169 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_101243, whole genome shotgun sequence.
ACCESSION   DATAIQ010000168 DATAIQ010000000
VERSION     DATAIQ010000168.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2169)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2169)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2169
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_101243"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(200..1165)
                     /locus_tag="VHN20_02895"
     CDS             complement(200..1165)
                     /locus_tag="VHN20_02895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009210464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEX2724749.1"
                     /translation="MLFRGRIILALGAFVGLVTSAAAFPDRPVQVIAPWAAGGGVDTV
                     TRIFADGFEKELGVPVAVVNRTGGGGLTGHAFIAGAAPDGYILGVASPEIAFYKPLGL
                     GDFTPQNLDLFSRLSLIPAGVTVRADSPYKTLADFLKAVKDSPKGTFMGSGTGTGGSW
                     HIAAGGLLKAAGIEPDRLRWVPSNGGAPALQDLAAGGLTVFTGSPIEAKPLLEAGKVR
                     TIALMAEERPATFPDIATTKESGIDWTYQNWFALVGPKGIPQDRRQKLFEAAQRAMAR
                     PEVQAAMKARGITPVWDKPGEFDAYVQGFVERGTAVLKDLDLIKN"
     gene            complement(1710..>2169)
                     /locus_tag="VHN20_02900"
     CDS             complement(1710..>2169)
                     /locus_tag="VHN20_02900"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEX2724750.1"
                     /translation="DEGVIGAFGCALNEIDVSLRFVRETDVDCIMLPKRFTLLERSAE
                     TELLPLCLEKGVGVLIAAPFDSGILATGAVPGATYDYQPAGPEMLERVRGLEARCEQF
                     GLPLAAAALQFPFRHPAVTSVVVGMRSRTEVESNLTSMRAPIPDGFWAGI"
BASE COUNT          376 a          727 c          713 g          353 t
ORIGIN      
        1 agctcgcaag agggaaagcg atggacaaga tcctgcggag ataaccgggc gcctcggcgc
       61 agccccgaac acgtccggtc cgtcgtgcgc cgtcatctga accggcgcat ctccgattcc
      121 gctagatgcg cattgccgtc gtaacgacaa tgttcactcg aaacgaaagt tttgaagctc
      181 cggcttgctg cacgccgcat cagttcttga tgagatccag gtccttcaac acggcggtgc
      241 cgcgttcgac gaagccctgc acataagcgt cgaactcgcc gggcttgtcc cacacggggg
      301 tgatgccgcg ggccttcatg gccgcctgca cctcgggccg ggccatggcg cgctgcgccg
      361 cctcgaacag cttctggcgg cggtcctgcg ggatgccttt cgggccgacc agggcgaacc
      421 agttctggta cgtccagtcg atgccgctct ccttcgtggt cgcaatatcc gggaaggtgg
      481 cgggacgctc ttccgccatg agggcgatgg tgcgcacctt gccggcctcg agcaggggct
      541 tggcctcgat cggcgagccg gtgaagaccg tgaggccgcc ggcggcgaga tcctgcaggg
      601 ccggggcgcc gccattgctc ggcacccagc gcagccggtc gggctcgatg ccggccgcct
      661 tgaggaggcc gccggcggcg atgtgccagg aaccgcccgt gccggtgccg gagcccatga
      721 aggtgccctt cgggctgtcc ttcaccgcct tgaggaagtc ggcgagcgtc ttgtagggcg
      781 aatccgcgcg caccgtgacc ccggcgggga tcagcgacag gcgcgagaac aggtcaaggt
      841 tttgcggggt gaagtcgccg aggccgagcg gcttgtagaa ggcgatctcg gggctggcga
      901 cgccgaggat gtagccgtcg ggcgcagcgc cggcgatgaa ggcgtggccc gtcaggccgc
      961 cgccgcccgt ccggttgacg acggcgaccg gaacgccgag ctccttctcg aagccgtcgg
     1021 cgaagatgcg cgtgaccgta tccacgccgc cccccgccgc ccacggcgcg atgacctgca
     1081 ccggccggtc gggaaacgcc gcagcgctgg tgacaaggcc cacgaaggcg ccgagcgcca
     1141 ggatgatcct accccggaac agcatgaggt tttcctcctt cagcggcagc ttgggtcagc
     1201 tgctcttcag atcgcactgc ttgcattcca actcgccgcc tcgcgcgtga agcacggcgg
     1261 cgcgctgatg agttagcaca cgccaatggt cgcgaacagc tacgctgcgt cggcgatgcc
     1321 atccccgcag gctgcggtgc catccgcgcg gcttaactca gtgggctgtt tcgaactccg
     1381 ctccacagtc tgctttaccc cgaagcagct atttcgcgtt cggcaggatc gcgtcatcgc
     1441 gctcgacgaa agcgatcacc ccgttcccaa agccggcgcc gatggcaagc aaagggctac
     1501 cgaggccggg agcggaagtt gcatccgcaa ctcccttaac gtccgttccg cgcccatagc
     1561 ggtcgcaggg ccggaatctc ggctcgccga aggcggacat tgcagaagcg ataggtctgc
     1621 ctcgtattat gtggggacgg cctcgtcagg agcgctggcc cttcacgcca ccgccgccga
     1681 agctataact caacgcggat agggcttggt cagatacctg cccagaatcc atccgggatt
     1741 ggcgctcgca tcgatgtcag attgctttcg acctcggttc ggctccgcat gccgaccacc
     1801 acgctcgtga cggcgggatg gcggaatggg aactgcagcg ccgccgctgc caagggcagc
     1861 ccgaactgtt cacaccgggc ctccaggccg cgaacccgct ccagcatctc cggaccggcc
     1921 ggctggtagt cataggtggc cccgggaacg gcgcctgtgg cgaggatgcc ggaatcgaag
     1981 ggtgccgcga tcaggacgcc gacccccttt tcaaggcaga gcggaagcag ctcggtctcg
     2041 gccgaccgct caagcaacgt aaagcgcttg ggtagcatga tgcagtcgac gtccgtctca
     2101 cgcacaaagc gcaggctcac gtctatctca ttgagcgcac agccgaacgc gccgatcacg
     2161 ccctcgtca
//
LOCUS       DATAIQ010000169         2148 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_424210, whole genome shotgun sequence.
ACCESSION   DATAIQ010000169 DATAIQ010000000
VERSION     DATAIQ010000169.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2148)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2148)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2148
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_424210"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..573)
                     /gene="rsmH"
                     /locus_tag="VHN20_02905"
     CDS             complement(<1..573)
                     /gene="rsmH"
                     /locus_tag="VHN20_02905"
                     /EC_number="2.1.1.199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019905500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016434 - rRNA (cytosine)
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HEX2724751.1"
                     /translation="MTGRGDGTTGAAGGPTRHVPVLLGEVCDALNAAQGGVFVDGTFG
                     AGGYTQAILAANPDNRVIAIDRDPDAIAAGAQLAAAACGRLSLMPGRFSELDEIVAGA
                     GVGQVDGVVLDIGVSSMQLDQAERGFSFRHDGPLDMRMERQGASAADLVNEASEAELA
                     DIFYHYGEERRARAVARGVIEKRRKGRIETT"
     gene            complement(570..1067)
                     /locus_tag="VHN20_02910"
     CDS             complement(570..1067)
                     /locus_tag="VHN20_02910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="division/cell wall cluster transcriptional
                     repressor MraZ"
                     /protein_id="HEX2724752.1"
                     /translation="MNRFVSNFTSRLDSKGRVSIPASFRAVLARDGFEGLYVHPALDA
                     PALDAGGNMLLNEIDAFLSTLSPYSDERDQLSTALLGTSEVLKIDPEGRVILTPSVKA
                     HAGIVDAVTFVGLGHKFQLWEPERFRAHLEEARTKVRHLKKTLSARGLDGRVSEDSPP
                     GARER"
     gene            complement(1381..1805)
                     /gene="rnpB"
                     /locus_tag="VHN20_02915"
     ncRNA           complement(1381..1805)
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="VHN20_02915"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
BASE COUNT          342 a          748 c          697 g          361 t
ORIGIN      
        1 agtcgtctcg atgcgaccct tgcggcgctt ctcgatgacg ccccgggcga ccgccctcgc
       61 ccgccgctcc tcgccgtaat gatagaagat gtcggcgagc tccgcctcgg acgcctcgtt
      121 gacgaggtcg gcggcgctcg ctccttgccg ctccatgcgc atgtcgagcg gcccgtcgtg
      181 gcgaaacgag aagccgcgct cggcctggtc gagctgcatc gacgagaccc cgatgtcgag
      241 gacaacgccg tcaacctggc cgacgccggc ccctgcgacg atctcatcca gctcgctgaa
      301 gcgccccggc atcagggaca ggcgcccgca cgccgccgcg gcaagctggg cgccggccgc
      361 gatcgcgtcg ggatcgcggt cgatcgcgat cacgcgatta tccgggtttg ccgcgaggat
      421 ggcctgagtg tagccgccgg cgccaaacgt gccgtcgacg aaaacgccgc cttgcgcagc
      481 gttgagcgca tcgcagactt cccccaggag cacgggcacg tggcgggtcg gtccgccagc
      541 ggcgccggtt gtgccgtcgc cgcgacccgt catcgctccc gcgctcctgg cgggctgtct
      601 tccgataccc gtccgtccag tccgcgggcg ctcaaggtct tcttgagatg ccgcactttc
      661 gtgcgcgcct cctccaagtg cgcacggaag cgctcgggct cccacaactg gaacttgtga
      721 ccgagaccga cgaacgtcac cgcgtccacg atcccggcat gggccttcac tgacggcgtg
      781 agaatgaccc gcccttccgg atcgatcttg aggacctcgc tcgtgcccag cagggccgtc
      841 gagagttggt ccctttcgtc cgaatacggc gacagcgtcg acaagaacgc gtcgatttcg
      901 ttcaggagca tgtttccccc tgcgtccagg gccggcgcat cgagcgccgg atgaacatac
      961 aggccttcga acccatcgcg ggcaagaact gcccgaaatg acgcagggat cgagacccga
     1021 cccttcgagt ccaaccgact ggtgaaattg gacacgaagc ggttcatgta cgcgaacctg
     1081 cacgctcccg atggtcaact ctcgcgcggc aagaactccg ccgcatcccg gccacgcggc
     1141 aggcaatcct cgggcacgga tggacgcgct gcggcctctg cagccacggc cagccggctt
     1201 tgtcggtgcc tctgtggacg ggatgatttg ggatagcatg ggatcatatg gtcgtcaacg
     1261 gaccgcccca cgcgagcagt tgcggtccgc cacggtctaa aagaggcgcc ggaagttaag
     1321 gaagcgtgag cacgggggcg cgggcctgcc gggcccgccg tgtcgaggga gggaaagaaa
     1381 ggggtcagcc ggcctgtaag ccgggttctg tagggcccgc gagcgggcct ggcggccatt
     1441 cctctgggac ggtcgttgcc gaccgcctca agcaaccaac ccgggcgacg gacgtggaaa
     1501 cctgtcctgg gcgcaagcgc cctgccgccc ctattcggtt ttgctcccgg tggggtttgc
     1561 catgccggcc gcgttgccgc ggccgcggtg cgctcttacc gcaccctttc acccttaccc
     1621 cgccgacact tcggcccatc ctcgagcggg cgctcgtcac gagccgaagt gcaggcgggg
     1681 cggtctgctt tctgtggcac tttccctggg gtcgcccccg ccggacgtta tccggcaccg
     1741 tgcttccatg gagcccggac tttcctctcc ggatcggaac ccggagcggc cgcccggccg
     1801 gctgacctgt cgaggatgtg gctgcctggg gcgggcgcgt caaggcgaaa cccatgctcc
     1861 cgatcgcgct ggcgccgcac ccggttaacg ccggttgcga cggcgtgcgg ggacgtggac
     1921 gtgttgctgc tgccacacat agccgccccg catgttaaca acttggaacc cttatgccgc
     1981 aaacggagtt gccgttttcg cgagggccaa gctacggttt gcgcgccgca gccgcggcct
     2041 tcaacccgaa atccgaaaca cgggacagct cacatgaaga agtttcttgc catcgccgct
     2101 gcgggctcgc tcgccttctc ggtaactgct tgccagacgc cgggtgag
//
LOCUS       DATAIQ010000170         2534 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_50201, whole genome shotgun sequence.
ACCESSION   DATAIQ010000170 DATAIQ010000000
VERSION     DATAIQ010000170.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2534)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2534)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2534
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_50201"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            181..630
                     /locus_tag="VHN20_02920"
     CDS             181..630
                     /locus_tag="VHN20_02920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724753.1"
                     /translation="METQNTKVVETQTEAKPLDDGTAAGIWGDPPVGLKATLADGPGP
                     HRTKGWDSLPYIEFASDTTCDGSVRPGTLVDGPGPHLTKGGDSLPYIEFASEATCDGS
                     VRPGTLVDGPGPHLAAGWDSLPYIECDGSVRPVATDPVYVPESLFIM"
     gene            complement(623..1906)
                     /locus_tag="VHN20_02925"
     CDS             complement(623..1906)
                     /locus_tag="VHN20_02925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006338790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HEX2724754.1"
                     /translation="MSDLAWINAALTSARPQALGALLRYFRDLDTAEEAFQEACLRAL
                     RTWPRNGPPRDPAAWLIFVGRNVAIDHVRRRGKQQALPPEEMISDLEDAESDLAERLD
                     NADYRDDVLRLLFICCHPDLPATQQIALALRIVCGLTVHEIARAFVVGDSAMEQRITR
                     AKGRVADADVPFEAPGAVERAERLAAVAAMIYLLFNEGYSASGGEALLRAPLCEEAIR
                     LARLLLRLFPGEPEIMGLTALLVLQHARAPARLDAQGSIVLLDDQDRSLWNGTLITEG
                     LALIDKAVRHRRPGAYQVQAAIAATHARAASAPDTDWAQIDLLYATLERMQPSPVVTL
                     NRAVAVAKVRGPAAALAMIEPLAPRLSGYFHFFGAKGAFLMQLGRNDEARVAFDRAIA
                     LAHTAAEAAHIRMHLDRLIKDSAPPAGHQAGAALT"
     gene            complement(1914..2324)
                     /locus_tag="VHN20_02930"
     CDS             complement(1914..2324)
                     /locus_tag="VHN20_02930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013946067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HEX2724755.1"
                     /translation="MLYAVLCYNDEKVVGSWTKEEDDAVMGRLDVVHQKLKKEGKLGP
                     AARLLPTTAATTLRKSQDLVLDGPYAETKEQLLGFYIIDVAGLEEGLEVARALTRANP
                     GGAYELRPISLFLPGSDDLGPQRERSKRADGVAG"
BASE COUNT          395 a          857 c          893 g          389 t
ORIGIN      
        1 ccgaccggcg ggcgacacgc agcgaatgcg gtcgccacag ccgctgcccg ggaatcccgc
       61 cttcatgtct gccggcgcac gtcgccagtt ccagagtcca cgtgccgacg ggcacatctt
      121 ttcctgccga tcctggtcaa actgaacctg ggatgttctt gtggttgaaa ggaagcagcc
      181 atggagacgc agaacacgaa ggtcgtggaa acacagaccg aagcgaagcc gctggacgac
      241 ggcacggcgg cgggcatctg gggcgatccg ccggtaggct tgaaagcgac gctcgccgat
      301 gggcccggcc cgcatcggac gaagggctgg gacagcctcc cgtatatcga gttcgcttcc
      361 gacacgacgt gcgacggttc tgtgcggccg ggcacgctcg tcgatggtcc cggcccgcat
      421 ctgaccaagg gcggggacag cctcccgtat atcgagttcg cttccgaggc gacgtgtgac
      481 ggctctgtgc ggccgggcac gctcgtcgat ggtcccggtc cgcatttggc ggcgggctgg
      541 gacagcctcc cgtacatcga gtgcgacggg tccgtgcggc cggttgcgac cgatccggtc
      601 tacgtgcctg aaagcctgtt catcatgtga gcgcggcgcc ggcttgatga ccggctggcg
      661 gcgcgctgtc cttgatcagc cggtcgagat gcatgcggat atgggcggct tcggcggccg
      721 tgtgggcgag cgcgatggcg cggtcgaagg cgacgcgcgc ctcgtcgttg cgtccgagct
      781 gcatcaggaa cgcgcccttg gcgccgaaga agtggaaata gccggacagc cgcggcgcca
      841 ggggctcgat catggcgagg gccgccgccg gcccgcgcac cttggcgacg gccacagcgc
      901 ggttgagcgt cacgacgggc gacggctgca tccgctccag cgtcgcgtaa agcaggtcga
      961 tctgcgccca gtcggtgtca ggcgcggatg cggcgcgggc atgcgtggcg gcgatcgccg
     1021 cctgcacctg gtaggcgccg ggacggcggt gacgcaccgc cttgtcgatc agcgccaggc
     1081 cctcggtgat cagcgtgccg ttccacaggc tgcggtcctg gtcgtcgagc agcacgatgc
     1141 tgccctgcgc gtcgagccgc gccggcgcgc gcgcgtgctg cagcacgagc agcgccgtga
     1201 gccccatgat ctcgggctct cccggaaaca gccgcagcag cagccgcgcc agccggatcg
     1261 cctcctcgca cagcggcgcg cgcagcaggg cctcaccgcc gctcgccgaa tagccttcgt
     1321 tgaacaggag gtagatcatc gctgcgacgg cggcgagccg ttccgcgcgc tcgacggcgc
     1381 cgggcgcctc gaacggcacg tcggcgtcgg cgacgcgccc cttggcgcgg gtgatgcgct
     1441 gctccatggc gctgtcgccg accacaaacg cgcgcgcgat ctcatgcacg gtgaggccgc
     1501 acacgatgcg cagcgccagg gcgatctgct gcgtcgccgg caggtcggga tggcagcaga
     1561 tgaacaacag gcgcagcacg tcgtcccggt aatcggcgtt gtcgaggcgc tcggcgaggt
     1621 cgctttccgc atcctcgaga tcggagatca tctcctccgg gggcaaggcc tgctgcttgc
     1681 cgcggcggcg cacgtgatcg atggcgacgt tgcggccgac gaagatcagc caggcggcgg
     1741 gatcgcgcgg cgggccgttg cgcggccacg tcctgagcgc gcgcaggcac gcttcctgga
     1801 acgcctcctc ggccgtgtcg agatcgcgga aatagcgcag cagcgcgccg agcgcctgcg
     1861 gtcgcgccga ggtgagggcg gcgttgatcc aggcgagatc gctcaccggg tcctcacccg
     1921 gcgacgccgt cggcgcgctt ggatcgctcc cgttgcgggc cgagatcgtc gctgccgggc
     1981 aggaacagcg agatcgggcg caactcatag gcgccgcccg ggttggcgcg ggtcagcgcg
     2041 cgcgccacct ccagaccttc ctcgagcccc gccacgtcga tgatgtagaa gcccagaagc
     2101 tgctccttgg tctccgcgta aggcccgtcg agcacaaggt cctggctctt gcgcagcgtg
     2161 gtcgcggcgg tggtcggcag aagccgcgcc gccggcccga gcttgccttc cttcttcagc
     2221 ttctggtgga cgacgtcgag gcgtcccatc accgcgtcgt cctcctcctt ggtccaggag
     2281 ccgaccacct tttcgtcgtt gtagcagagg acggcgtaga gcatcgtcga cttccccatg
     2341 aattcaaaat cttagccgga acggccagca tgcgatccta gcgccaatcg ccacggggac
     2401 aacccaagcc gcttggctgc ccgaaggacg aacgacatcg cgtcatcccg acagggcagg
     2461 ggtaaatttt gtcggcgcac gacgccgtga ccaacgcgga tgaatcccat cgcaagggcg
     2521 cgcccggcgc aggt
//
LOCUS       DATAIQ010000171         2448 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_286175, whole genome shotgun sequence.
ACCESSION   DATAIQ010000171 DATAIQ010000000
VERSION     DATAIQ010000171.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2448)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2448)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2448
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_286175"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1243)
                     /locus_tag="VHN20_02935"
     CDS             complement(<1..1243)
                     /locus_tag="VHN20_02935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007196120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl sugar amidotransferase"
                     /protein_id="HEX2724756.1"
                     /translation="MTFRHSDPRRDRLDAARYAPDAAEPETMYGLPRAIRFCASCVIS
                     NQRPNSTVEYKHTSDSTKQTIAFNDDGVCDACRQAQRKSEIIDWDRRRHELVQLCDKY
                     RSRTGHYDCLVPGSGGKDSFYQSWMLKHEFGMNPLTCTWAPHVYTDWGWRNFNRWIHS
                     GFDNYLMTPNGRVKRLMTRLAVENLFHPFQPFMIGQKAFAPKMAAMTNIPLIFYGENE
                     AEYGNPIADNETAKRDHAYFSSTDTSQVFLGGTSVKDLVDDYGVRPADLQPYLPADPA
                     DLERKGIEVHYLGYYLKWHPQSAYYHAVEHGGFEASPERTPGTYSKYNSIDDRIDDLH
                     YYTTYIKFGIGRSTYDAAQEVRSGDLTREEGVALVRRYDGEFPERFADELMAYLSVPD
                     NEFPEAARQFEAPIMDRAYFDA"
     gene            complement(1347..2387)
                     /gene="neuB"
                     /locus_tag="VHN20_02940"
     CDS             complement(1347..2387)
                     /gene="neuB"
                     /locus_tag="VHN20_02940"
                     /EC_number="2.5.1.56"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006726247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0016051 - carbohydrate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylneuraminate synthase"
                     /protein_id="HEX2724757.1"
                     /translation="MAQMRQVFVIAEAGVNHNGRLDLALELVRVAARAGADAVKFQTF
                     KADQLAAAGAKTVAYQARSGADDQHAMLKALELGEAEHERLVEETRAVGIEFMSTAFD
                     LESARFLHKLGIKRVKVPSGEITNHPFLRELAGTGLPVLLSTGMADLDEVREAVAVVD
                     EVQGKAAAHLPRAERLCVLHCTSAYPTPPEDANLSAIQTLERELGVAVGFSDHTTGIL
                     LAPVAVALGARVIEKHFTLDRSMPGPDHAASLEPDELKSMVEAIRAVELAKGDGVKQP
                     RPSELEARQLVRRGLKAAADLPADHVINAEDVLLLRPVTGIAPKELSQAMGRRLKRSL
                     RRGEAIEWADLS"
BASE COUNT          371 a          770 c          872 g          435 t
ORIGIN      
        1 gcgcgtcgaa ataggcgcgg tccatgatcg gcgcttcgaa ctggcgcgcc gcttccggga
       61 actcgttgtc gggcacgctg agataggcca tcagctcgtc ggcgaagcgc tcggggaact
      121 cgccgtcgta gcgccgcacg agcgccacgc cctcctcgcg ggtcaggtcg ccggagcgga
      181 cttcctgggc cgcgtcgtag gtcgagcggc cgatgccgaa cttgatgtag gtcgtgtagt
      241 agtggagatc gtcgatgcgg tcgtcgatcg aattgtattt cgaataggtg cccggcgtgc
      301 gctcgggcga cgcttcgaac ccgccatgct cgacggcgtg ataatacgcc gattgcggat
      361 gccatttgag gtaatagccg agataatgga cctcgatgcc cttgcgctcg agatccgccg
      421 ggtccgccgg caggtacggc tgcaggtcgg cggggcgcac gccgtagtcg tcgaccagat
      481 ccttgacgga ggtgccgccg aggaagacct ggctcgtgtc ggtcgacgag aaataggcgt
      541 gatcgcgctt ggcggtctcg ttgtcggcga tcgggttgcc gtattcggct tcgttctcgc
      601 cgtagaagat cagcgggatg ttcgtcatcg cggccatctt cggcgcgaac gccttctggc
      661 cgatcatgaa cggctggaac gggtggaaaa ggttctcgac cgcgaggcgc gtcatcagcc
      721 gcttgacccg gccgttcggc gtcatgaggt agttgtcgaa gcccgagtgg atccagcggt
      781 tgaagttgcg ccagccccag tccgtgtaga cgtgcggcgc ccaggtgcag gtgagcgggt
      841 tcatcccgaa ctcgtgcttg agcatccacg actggtagaa cgaatccttg ccgcccgagc
      901 cggggaccag gcaatcgtaa tgccccgtgc gcgaccggta tttgtcgcag agctggacga
      961 gctcgtggcg gcgccggtcc caatcgatga tctcggactt gcgctgggcc tgccggcacg
     1021 cgtcgcagac gccgtcgtcg ttgaaggcga tggtctgctt ggtgctgtcg gaggtgtgct
     1081 tgtattcgac cgtcgagttg ggccgctggt tcgagatgac gcaggaggcg cagaagcgga
     1141 tcgcccgcgg caggccgtac atcgtctccg gctcggccgc gtccggcgcg tagcgcgcgg
     1201 catcgagtcg gtcgcggcga ggatcggaat gcctgaaggt catggtctgt ctcgtggttg
     1261 gcccgctgcg cacccgcgtc aggcgctacg gagtcggggt gaatgcaaac tgtggcgtct
     1321 gcgcgacgaa tcggccagcg tgatcctcat gagagatcgg cccactcgat cgcctcgcct
     1381 cgccgcagcg agcgcttgag acggcgcccc attgcctggg acagctcttt gggcgcgata
     1441 ccggttaccg gcctcaaaag caagacatcc tcggcgttga tgacatggtc ggcgggcaga
     1501 tctgcggcag ctttgaggcc gcggcgcacg agttgccggg cctcgagctc ggacggtctc
     1561 ggctgcttga cgccgtcgcc cttggccagc tcgacggcgc gaatcgcctc gaccatgctc
     1621 ttcagctcgt cgggctcgag cgacgccgcg tgatccgggc cgggcatgct gcggtcgagc
     1681 gtgaaatgct tctcgatcac gcgcgcgccg agggcaaccg cgaccggcgc cagcaggatg
     1741 cccgtggtgt ggtcggaaaa ccccaccgcg acgccgagct cgcgctccag cgtctggatg
     1801 gcgctgaggt tggcatcctc cgggggcgtc ggatacgcgg aggtgcaatg cagcacgcag
     1861 agccgctcgg cgcgcggcag atgcgccgcc gccttgccct ggacctcgtc gacgacggcc
     1921 accgcctcgc gcacctcgtc gaggtcggcc atcccggtcg acagcagcac cggcagcccc
     1981 gtgccggcga gctcgcgcag gaacgggtgg ttggtgatct cgccggacgg gaccttgacg
     2041 cgcttgatgc cgagcttgtg caggaagcgg gccgattcga ggtcgaaggc cgtcgacatg
     2101 aactcgatgc cgaccgcccg cgtctcctcg acgagccgct cgtgctcggc ctcgccgagc
     2161 tcgagcgcct tgagcatggc gtgctggtcg tcggcgccgg agcgggcctg gtaggcgacc
     2221 gtcttggcgc cggcggcggc gagctgatcg gccttgaagg tctggaactt gaccgcgtcg
     2281 gcgccggcgc gggccgcgac ccggacgagc tcgagcgcga gatcgagccg gccgttgtgg
     2341 ttgacgccag cttcagcgat cacgaacact tggcgcattt gggccatcga tcttttccaa
     2401 ccttgtctcg aggggacgcg ccgggacgcc gacatacacg ccgggccg
//
LOCUS       DATAIQ010000172         2332 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_188683, whole genome shotgun sequence.
ACCESSION   DATAIQ010000172 DATAIQ010000000
VERSION     DATAIQ010000172.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2332)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2332)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2332
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_188683"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..724
                     /locus_tag="VHN20_02945"
     CDS             <1..724
                     /locus_tag="VHN20_02945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012253729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HEX2724758.1"
                     /translation="AGEQERLGALTAARQERLGEAQKMFSEERERAAGLATRAETLKE
                     LIDGMERELSAAKRAVDDARRIAESQAREARERFAAAAFRDPARLAPKVPFSEVRGLV
                     PRPVSGQAVREFGSDDGYGGTTRGVSIATRPRAVVTSPADGWVAFAGPFRSFGRLLII
                     NAGSGYYLLLAGMDHISVEVGQFVLAGEPVATMGEASSVSPAAGAIETNDPVLYVEFR
                     KDGGSIDPGPWWAKSQSEKVRG"
     gene            724..2037
                     /locus_tag="VHN20_02950"
     CDS             724..2037
                     /locus_tag="VHN20_02950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012333963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HEX2724759.1"
                     /translation="MRKLSLVLMGALVGAGMTTLVSQTNLLSSAIAASAETYRQLSLF
                     GDVFEKVRTDYVEKPDEAKLIESAINGMLAGLDPHSSYMDPKSFRDMQVTTRGEFGGL
                     GIEVTMEDGLVKVVTPIDETPAARAGILANDVITHIDDEQVQGLTLNQAVDKMRGPVN
                     TTVRLRIQRKERKEPLEVKLTRETIRIRPVRSRVEGDLGYLRVTQFNEQTYEGLRTAI
                     DKIASEVGQEKLKGYVIDLRNNPGGLLDQAIMVSDAFLERGEIVSTRGRNADETQRFN
                     AKPGDLTKGKPLVVLINGGSASASEIVAGALQDHKRATVLGTRSFGKGSVQTIIPLGG
                     NGAVRLTTARYYTPSGRSIQAKGIDPNQEILQEVPDELKGKDETKGEAGLRGHLRNGD
                     KEEKGGSSAYIPPDPAKDKQLNAAFDFLRGVRKGAANTTQGGVPN"
BASE COUNT          435 a          749 c          795 g          353 t
ORIGIN      
        1 cgcgggcgaa caggaacggc tcggcgcgct cacggccgcc cgtcaggagc gcctgggcga
       61 agcccagaag atgttctcgg aggagcgcga acgggctgcc ggcctcgcca cccgggccga
      121 gactctcaaa gaattgatcg acggcatgga gcgtgagctg agcgccgcca aacgcgccgt
      181 ggacgacgcc cgccgcatcg ccgagagcca ggcccgggag gcgcgcgagc gtttcgccgc
      241 ggcggcgttt cgcgacccgg cgcggttggc cccaaaagtg cctttttccg aagtgagagg
      301 actggtgcca cggccggtga gcggacaggc cgttcgtgaa ttcggaagtg acgacggcta
      361 cggcggcacc acccgcggcg tctcgatcgc aacccggccg cgcgctgtgg tgacgagtcc
      421 ggccgacggc tgggtcgcct tcgcgggacc attcaggtcc ttcgggcgac tcttgatcat
      481 caatgccgga agcggctact atttacttct ggcaggcatg gaccacatca gtgttgaggt
      541 aggtcagttc gtgctcgctg gcgaacctgt cgcgaccatg ggcgaggcat catcggtgtc
      601 tccggcggcg ggcgccattg agacgaacga ccccgtgctc tatgtcgagt tccggaagga
      661 cggcggttcg attgatccgg ggccgtggtg ggcgaaatcg cagagcgaaa aggttcgcgg
      721 ataatgcgca aactgtctct ggttttgatg ggcgccctgg tcggtgccgg catgacgaca
      781 ttggtgtcgc aaaccaacct gctgtcgagc gccatcgccg cttcggccga gacatatcgg
      841 cagctcagcc tgttcggaga cgtcttcgag aaggtccgca cggactatgt cgagaagccc
      901 gacgaggcca agctgatcga atcggccatc aacggcatgc tggccgggct tgatccgcat
      961 tcgagctaca tggatcccaa gagcttccgc gacatgcagg tgacgacccg cggcgagttc
     1021 ggcgggctcg gcatcgaggt gacgatggag gacggcctcg tcaaggtcgt cacgccgatc
     1081 gacgagacgc ccgcggcgcg cgccggcatc ctcgccaacg acgtcatcac gcatatcgac
     1141 gacgagcagg tgcaggggct caccctcaac caggcggtcg acaagatgcg cggtccggtg
     1201 aacaccacgg tgcggctcag gatccagcgc aaggagcgca aggagccgct cgaggtgaag
     1261 ctgacccgcg agaccatccg catccgtccg gtgcgctcgc gcgtcgaggg cgacctcggc
     1321 tacctgcgcg tcacccagtt caacgagcag acctacgagg gcctgcgcac cgccatcgac
     1381 aagatcgcga gcgaggtcgg ccaggagaag ctcaagggct acgtgatcga cctgcgcaac
     1441 aatccgggcg gtctgctcga ccaggccatc atggtgtcgg acgcgttcct ggagcgtggc
     1501 gagatcgtct cgacgcgcgg ccgcaacgcc gacgagacgc agcgcttcaa tgccaagccg
     1561 ggcgatctca ccaagggcaa gccgctggtg gtgctgatca atggcggctc ggcctcggct
     1621 tcggagatcg tggccggcgc cctgcaggac cacaagcgcg ccaccgtgct cggcacgcgc
     1681 tcgttcggca agggctcggt gcagaccatc atcccgcttg gcggcaacgg cgcggttcgc
     1741 ctgacgacgg cgcgctacta cacgccgtcc ggccgttcga tccaggccaa gggcatcgat
     1801 ccgaaccagg agatcctcca ggaggtcccg gacgagctga agggcaagga cgagaccaag
     1861 ggcgaggccg gtctgcgcgg ccacctgagg aacggcgaca aggaagagaa gggtggctcg
     1921 tcggcctaca tcccgccgga tccggccaag gacaagcagc tcaatgccgc cttcgacttc
     1981 ctgcgcggcg tccgcaaggg cgcagccaac acgacgcagg gcggggttcc caactgagcc
     2041 ttgatccggc gacgtggggc tcccccttcg ccgaccgagg atcatgccgc tccagaagcc
     2101 tcgccccgag gcgtggcaaa cgatcacggc ccgctgcgtt aaccagagcg cggcgggccg
     2161 atccgattca aatccggccc cgcacggcag ggccgtgcgg ttaacgatac gagcaagcgg
     2221 cgcgcaccga ttgcgtcccg ggcgtcacgc ggcattgaga cggatgcgct cgtgttctat
     2281 gtagagtctg tctcttgtag cgtttcaata acgagagaac ggcggctcga tt
//
LOCUS       DATAIQ010000173         1647 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_378125, whole genome shotgun sequence.
ACCESSION   DATAIQ010000173 DATAIQ010000000
VERSION     DATAIQ010000173.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1647)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1647)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1647
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_378125"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..747
                     /locus_tag="VHN20_02955"
     CDS             <1..747
                     /locus_tag="VHN20_02955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009492033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX2724760.1"
                     /translation="PTATGGAVTALEGLSTRVFARDLVGPAASLAAKAPPYELRVHRR
                     YNPAGETSLNIVPGLMGTILTMTMLIFTALSVTREIERGTMENLLSMPVRPVEIMLGK
                     IIPYLMVGGVQMTVILVTAYLLFGVPVVGSLALLIALTLLFVVANLSIGYTFSTIATN
                     QLQAMQMSFFFFLPSMLLSGFMFPFRGMPVWAQYVGEILPLTHYLRLVRGVMLKGATL
                     ADLHVDVLALAAFALAAMGVAVARFRQTLD"
     gene            760..1395
                     /locus_tag="VHN20_02960"
     CDS             760..1395
                     /locus_tag="VHN20_02960"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012333558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HEX2724761.1"
                     /translation="MSHVVLLGDSIFDNAAYVGGGPDVVRQLREVLPAGWTATLRAVD
                     GAVTGSVKAQLARLPADATHLVLSIGGNDALGQMHVLEDASRSIADALNRMAGIGDAF
                     ERDYRAMLDAVAARPLPLAVCTVYNPRYPDPRLQRLAVAGLTLFNDAIIRQAFVRGLP
                     LIDLRLVCDDEADYANPIEPSARGGAKIAAAIARLVTEHDFARRRTEAFVR"
     gene            1486..>1647
                     /locus_tag="VHN20_02965"
     CDS             1486..>1647
                     /locus_tag="VHN20_02965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013165300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HEX2724762.1"
                     /translation="MSKEYILTLSCPDRIGIVAAVAGFLAERQGNILASAQFDDRLSN
                     RFFMRVQFEI"
BASE COUNT          224 a          607 c          518 g          298 t
ORIGIN      
        1 cccacggcga ccggcggcgc cgtcacggcg ctcgaaggct tgtcgacgcg ggtcttcgcg
       61 cgcgatctcg tcgggccggc ggcctccctt gccgccaagg caccgcctta cgagctgcgc
      121 gtccatcgcc gctacaaccc cgccggcgag accagcctca acatcgtgcc gggcctgatg
      181 ggcacgatcc tgaccatgac gatgctgatc ttcaccgccc tgtcggtgac ccgcgagatc
      241 gagcgcggca cgatggagaa cctgctgtcg atgccggtcc ggcccgtcga gatcatgctc
      301 ggcaagatca ttccctatct gatggtcggc ggcgtgcaga tgacggtgat cctcgtcacg
      361 gcgtatctcc tgttcggcgt gcccgtggtc ggcagcctcg ccctcctgat cgccctgacg
      421 ctgctgttcg tggtggcgaa cctttcgatc ggctacacgt tctcgaccat cgcgacgaac
      481 cagctccagg cgatgcagat gtcgttcttc ttcttcctgc cgagcatgct gctctccggc
      541 ttcatgttcc cgttccgcgg catgccggtc tgggcgcagt atgtcggcga gatcctgccg
      601 ctgacgcatt acctgcgcct tgtccgcggc gtcatgctga agggcgcgac gctcgccgat
      661 ctgcacgtcg acgtgctcgc gctcgccgcc ttcgcgctgg ccgcgatggg cgtcgcggtc
      721 gcgcgcttcc ggcagacgct ggactgacgc agcccggcga tgagccacgt cgtcctcctc
      781 ggcgattcga tcttcgacaa cgccgcctat gtcggtggcg gccccgacgt ggtgcgccag
      841 ctgcgcgagg tgttgccggc gggctggacc gcgaccctgc gcgcggtgga cggcgccgtg
      901 accggcagcg tcaaggcgca gctcgcgcgg cttccggccg acgcgacgca tctcgtgctc
      961 agcatcggcg gcaacgacgc gctcggccag atgcacgtcc tcgaggacgc ctcccggtcc
     1021 atcgccgacg cgctgaaccg catggccgga atcggcgacg cgttcgagcg cgactaccgg
     1081 gcgatgctcg atgcggtcgc ggcccggccg ctgccgctcg ccgtctgcac ggtctacaac
     1141 ccgcgctatc ccgatccccg cctgcaacgg ctcgcggtgg cggggctcac gctcttcaac
     1201 gacgcgatca tccgccaggc ttttgtccgc ggtctgccgc tgatcgatct gcgcctcgtc
     1261 tgcgacgacg aggccgacta cgccaacccg atcgaaccgt cggcgcgggg cggcgccaag
     1321 atcgccgccg ccatcgcccg cctcgtcacc gagcacgatt ttgcccgccg ccgcaccgag
     1381 gccttcgtgc ggtagcgaaa gtcctcgcgc ctagccagga cgctcggcgg ccccttgccc
     1441 cttcgcctgc cgcatcgtat cggctgcggc agaagctgag atcacatgtc gaaagaatat
     1501 attcttacac tttcctgtcc ggaccggatc ggcatcgtcg ccgccgtggc cggctttctt
     1561 gccgagcgcc agggcaacat cctggccagc gcccagttcg acgaccgcct gtcgaaccgc
     1621 ttcttcatgc gcgtgcagtt cgagatc
//
LOCUS       DATAIQ010000174         2881 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_424292, whole genome shotgun sequence.
ACCESSION   DATAIQ010000174 DATAIQ010000000
VERSION     DATAIQ010000174.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2881)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2881)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2881
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_424292"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..781
                     /locus_tag="VHN20_02970"
     CDS             <1..781
                     /locus_tag="VHN20_02970"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX2724763.1"
                     /translation="MRKAVRSGAVTDTQHLAAALDLLRRHPQACATVKAVLRDVEHDR
                     AAQTPEEALACCAAAFDRAARALPEASVALYALGSPDLLSAATAEVADRIRGWGLTGP
                     GRRVLDIGCGIGRFEEALAQEVEHVVGIDISAEMILAARRRCAAVGNVQFHQCSGRDL
                     SPFGDDSFDLVLAVDCLPYLVQSGMSLVERHFAEAARVLTAASDLLIVNFSYRGDSAR
                     DRADVTRLAQVFGFDVRRAGTHEFSLWDGLTFHLVRTDKRP"
     gene            825..1931
                     /gene="mtnA"
                     /locus_tag="VHN20_02975"
     CDS             825..1931
                     /gene="mtnA"
                     /locus_tag="VHN20_02975"
                     /EC_number="5.3.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012605723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046523 -
                     S-methyl-5-thioribose-1-phosphate isomerase activity
                     [Evidence IEA];
                     GO_process: GO:0019509 - L-methionine salvage from
                     methylthioadenosine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-methyl-5-thioribose-1-phosphate isomerase"
                     /protein_id="HEX2724764.1"
                     /translation="MKIDGRHYRTIFMADDGEAVLVIDQTRLPFAFTLQALRSVDDAA
                     AAIRTMIVRGAPLIGATAAYGVALAMRADPSDAALEQTVAALAATRPTAVNLHWALAR
                     MARVLQPVARQMREKRAFDEAARIADEDVACCRAIGEHGAGLIRTIAARKQGGPVNVL
                     THCNAGWLACIDWGTALSPVYVAHDAGVPVHVWVDETRPRNQGAALTAFELAAHGVPH
                     TVIADNAGGHLMQHGQVDLCLVGSDRTTATGDVANKIGTYLKALAARDNGVPFYAALP
                     FSTIDWTLSDGMREIPIEERPSTEVTHMTGRAQDGSVVSVEIVAPGSSAGNPAFDVTP
                     ARLVTGIITERGVAGASREGLLDLYPEKRAGAAA"
     gene            1943..2581
                     /locus_tag="VHN20_02980"
     CDS             1943..2581
                     /locus_tag="VHN20_02980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012111167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HEX2724765.1"
                     /translation="MEADLRAGVVRAAQAMDQAGFAPSKSGNVSCRYRDGALITPSGL
                     PYARMQPDDIVEIDLHGQVRSGAGKPSSEWPFHTSIYRARADAQAVVHTHSPKATALS
                     CARRGLPAFHYMIALAGGADVRCADYATFGTQELADNAVRALDGRKAVLLANHGVIAI
                     AATPDGALKIAAEIENLAGQYLALLQAGLEPVILDKAEMARVAAKFASYGKV"
BASE COUNT          449 a         1001 c          968 g          463 t
ORIGIN      
        1 gatgcggaaa gccgtcagat caggcgcggt gacggacacg caacatctcg ctgccgcgct
       61 cgatcttttg cgacgacatc cgcaggcatg cgcgaccgtg aaggcggttc tccgcgacgt
      121 cgagcacgac cgcgccgcgc agacgccaga ggaggccctt gcctgctgcg ccgcggcttt
      181 cgaccgggcg gcacgggctc tgccggaagc gagcgtcgcc ctttacgcgc tcggcagccc
      241 ggaccttctc agcgcggcca ccgccgaagt ggcggaccgc atccgtggct ggggcctcac
      301 cgggccaggc cggcgcgtgc tcgatatcgg ctgcggcatc gggcgtttcg aggaggcgct
      361 tgcgcaggag gtggagcacg tcgtcggcat cgacatatcg gccgagatga tcctggccgc
      421 acgccgtcgc tgcgccgcgg tcggcaacgt gcaattccac cagtgttccg gccgtgacct
      481 ttcgccattc ggcgatgaca gcttcgacct cgtgcttgcc gtcgattgcc tgccttacct
      541 ggtgcaatca ggtatgagcc tggtcgagcg gcatttcgcc gaggcggccc gggtcctcac
      601 ggccgccagc gacctcctga tcgtcaactt ctcctaccgc ggcgattcgg cccgcgaccg
      661 tgccgacgtg acccgcctgg cgcaagtctt cgggttcgac gtccggcgcg ccggcaccca
      721 tgagttcagc ctgtgggacg gattgacgtt ccatcttgtc agaaccgata aaaggccctg
      781 aggacgcgcg tcccgcgacg cgcggggcgc cagggaccaa gcgcatgaag attgacggcc
      841 gccattaccg gacgattttc atggctgatg acggggaggc cgtcctcgtc atcgaccaga
      901 cacggcttcc ctttgcgttc actttacagg cgctgcgcag cgtcgacgac gcggccgcgg
      961 cgatccgaac catgatcgtg cgcggcgcgc cgctcatcgg cgcgaccgcc gcctacggcg
     1021 ttgcgcttgc catgcgggcc gatccgtccg atgcggcgct cgagcaaacg gtcgcggcct
     1081 tggccgcgac gcgcccgacg gccgtcaatc tgcactgggc gctggcgcgc atggcccgcg
     1141 tcctgcagcc ggtcgcgcgc cagatgcgcg aaaaacgcgc cttcgacgag gcggcccgca
     1201 ttgccgatga agacgtggcg tgctgccgtg cgatcggcga gcacggggca gggctgatcc
     1261 gcaccatcgc cgcacgcaag cagggtgggc cggtcaacgt gctgacgcat tgcaatgccg
     1321 gctggctcgc ctgcatcgac tggggcacgg ccctgtcgcc ggtctacgtg gcgcacgatg
     1381 cgggcgtgcc ggtgcatgtg tgggtcgacg agacgcggcc acgcaatcaa ggcgcagccc
     1441 tcaccgcctt cgaactggcg gcgcacggcg tgccgcatac cgtgatcgcc gacaatgccg
     1501 gcgggcacct gatgcagcac ggtcaggtcg atctctgcct ggtcggcagc gaccgcacga
     1561 ccgcgaccgg cgacgtcgcc aacaagatcg gcacctatct gaaggcgctg gcggcgcgcg
     1621 acaacggcgt gcccttctac gcggcgctgc cgttctccac gatcgactgg acgctgtcgg
     1681 acggaatgcg cgagatcccg atcgaggagc ggccgtcgac cgaggtcacg cacatgacgg
     1741 gcagggcaca ggacggctcc gtcgtcagcg tggagatcgt cgcgcccggc agcagcgccg
     1801 gcaaccctgc tttcgacgtc acgccggcgc ggctcgtcac cgggatcata accgagcgcg
     1861 gcgtcgccgg cgcgagtcgg gaagggctcc tcgatctcta tcccgagaag cgggcggggg
     1921 ctgctgcctg atgcgcgccg acatggaagc agacttgcgg gccggcgtcg tgcgcgccgc
     1981 gcaagccatg gaccaggccg gctttgcgcc ttccaagtcg ggaaacgtct catgccgtta
     2041 tcgcgacgga gccctcatca caccgtccgg cttgccgtat gcgcgcatgc agccggacga
     2101 tatcgtcgag atcgacctgc acgggcaggt gcgctcgggc gcgggaaagc cgtcatccga
     2161 gtggccgttc cacacgagca tttatcgcgc ccgtgccgat gcacaggcgg tcgtgcatac
     2221 gcacagcccc aaggcgaccg ccctgtcatg cgcacggcgt ggactacccg cattccacta
     2281 catgatcgcg ctcgccggcg gcgccgacgt gcgctgcgcc gactacgcca ccttcggaac
     2341 ccaggaactg gccgacaacg ccgtgcgcgc cctcgatgga cgcaaggccg tgctgctcgc
     2401 caatcacggg gtgatcgcca tcgcggcgac gccggacggc gcgctgaaga tcgctgcgga
     2461 aatcgagaac ctggccgggc aataccttgc tcttctgcag gccgggctcg agccggtcat
     2521 cctggataag gcggaaatgg cccgcgtcgc ggcgaaattc gccagctacg gcaaggtgta
     2581 gaaccggccg gcgcgaaccg tcctgctgcc gctcgctttt gcggccgcgt cggcaggccc
     2641 tgctcgatgc ggttgtgccc tgacaaaagc cgatcgcagg catcgggaac cgcagcaggc
     2701 gggcggcacg gaacattgcc tcggaccctc cgttatccca ccgcttcttc gattcgtgtt
     2761 ttcgatccgg gtggatttcg atgtcgatca gtgctgtccg cggtccaagc gccccccgtc
     2821 gctcgggccg agcctcgcct ctctggacat tcctgctcgg ccttgtggtc gtgcgcctca
     2881 c
//
LOCUS       DATAIQ010000175         5558 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_50238, whole genome shotgun sequence.
ACCESSION   DATAIQ010000175 DATAIQ010000000
VERSION     DATAIQ010000175.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 5558)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5558)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5558
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_50238"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(60..3050)
                     /locus_tag="VHN20_02985"
     CDS             complement(60..3050)
                     /locus_tag="VHN20_02985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018387200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding and (Fe-S)-binding domain-containing
                     protein"
                     /protein_id="HEX2724766.1"
                     /translation="MAAKVMPGLERRLKAEVTGEVMFDRFTRGRYATDASAYQIMPLG
                     VVTPRSVAEAERAIALAREEGVRVTPRGGGTSQCGQTINESLVVDCSKYLTRILDLDV
                     AGRRCVVEPGIVLDELNRQLKPHGLWFPIDVSTASRATIGGMAGNNSCGGRSLRYGTM
                     RDNVLSIDAVLADGTPMHFGRVANDLSDLPADASLRPLARDLLAIGAREAAEIEARFP
                     KVQRRVGGYNLDALTPGRNDINLAHILVGSEGTLAFSTQVELKLWPVLGRRVVGACHF
                     GRFYEAMDAAQHIVRLGPIAVELVDRTMIELARDIAMFRPTLEQFVRGEPDAVLLVEF
                     AENDAENQRRLAQLRELMGDLGFGWDKSGPHWGGVVEIADAGLQAAVADVRTSGLNIM
                     MSMKDEGKPVSFVEDCAVPLEHLADYTARLTEIFEKNGTRGTWYAHASVGCLHVRPIL
                     NLKLDKDIKAMRAIAEEAFALVRAYKGSHSGEHGDGILRSEFHETMFGTRLVRAFEEV
                     KDRFDPEGVLNPGKIVRAPKFDARGLLRYGPHYQPHDRPIALDWSGYPGTAGGLQGAA
                     EMCNNNGACRKLAGGAMCPSYRVTRDERDVTRGRANTLRLAISGQLGPDAFTSDGMAE
                     TLKLCVSCKACRRECPTGVDIARMKIEVLAARAQRYGHTLHQRLIGWLPRYAPVAARA
                     PWLLNLRNAVPAFAKLSEALAGFSARRSLPHWRRDVFRDREAAAGPEGGREVVLLADT
                     FNRYFERENLDAALTVLTTAGYRVHVPRPADGASRPLCCGRTFLAVGRVDETKREIER
                     VLATLAPFLARGVPVIGLEPSCLYTFRDEAPAMLKGDAVRRLSAQAVLFEEFLAREAK
                     DKRLALQLAPIAQKALLHGHCHQKSFGATGAVEAVLKLVPGLGVETVESSCCGMAGSF
                     GYAVDTIDASLAMAELSLLPAVRAADDATLIVADGTSCRHQIRDGCGRSALHVARVLE
                     ASVAAAGGVAHRPQPVTAASGGRA"
     gene            complement(3050..3193)
                     /locus_tag="VHN20_02990"
     CDS             complement(3050..3193)
                     /locus_tag="VHN20_02990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724767.1"
                     /translation="MRIRYSRRAQADLDAIFSYLNERSPDGGEIVILHVRDARRAPWK
                     GKS"
     gene            complement(3190..3417)
                     /locus_tag="VHN20_02995"
     CDS             complement(3190..3417)
                     /locus_tag="VHN20_02995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014890410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724768.1"
                     /translation="MTKLLDQAIAKIRELPDAAQDEAAEILFVLAAKADEPEELDEET
                     RAAIREGLEQAERGELVSDEEMVEFFRRRGA"
     gene            3500..4705
                     /locus_tag="VHN20_03000"
     CDS             3500..4705
                     /locus_tag="VHN20_03000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013167329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HEX2724769.1"
                     /translation="MPQNVSRTAGRHFLQIPGPTPVPDRILRAMDKPTIDHRGPEFQA
                     LGKRVLDGLKTIFKTSGPVIIYPASGTGAWEAALINTLSPGDRVLMVETGHFATLWKN
                     MAVKLGIEPEFIATDWRIGADAAAIEARLKEDGQHAIKAVCVVHNETSTGCTSRIDEV
                     RRAIDAARHPALLMVDTISSLGSIDYRHEEWGVDVTVAGSQKGLMLPPGLSFNAVSDK
                     ALKAAKQSKLPKLFWSWEEMLPHNQNGFFPYTPATNLLYGLAEAIDMLHEEGLETVFA
                     RHDRHAEATRRAVRAWGLEVLCREAKYYSSSLTAVLMPDGHNADAFRQIVLERFDMSL
                     GTGLSKLAGKVFRIGHLGDTNDLTILGALAGVEMGLGLAGVPHKKGGVQAAMDYLADP
                     QRAVRAAAE"
     gene            complement(4724..5137)
                     /locus_tag="VHN20_03005"
     CDS             complement(4724..5137)
                     /locus_tag="VHN20_03005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016555966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEX2724770.1"
                     /translation="MPSSAKRTVLASLAAVLVAGAGAAYGAYEYKRQEKAKSDAAALT
                     GGNPDQASRLITRYGCGGCHTIPGVRSANGLVGPPLQKFAGRVYIGGVLPNRPDNLVR
                     WIVNPRAVSPTTAMPRTGISEAEARHVAAYLLTLR"
     gene            complement(5121..>5558)
                     /locus_tag="VHN20_03010"
     CDS             complement(5121..>5558)
                     /locus_tag="VHN20_03010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015929006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase assembly protein"
                     /protein_id="HEX2724771.1"
                     /translation="IVHGVALWTWHIPALYEAALASGRLHWLQHLSFFATALLFWWSL
                     LRGRARERGYGAAVIYLFATSLHTGFLGILLALARQPLYPVQTRTALEWGLTPLEDQQ
                     LAGLIMWIPAGLVYAAAALVLAGLWIARSGAAARRGGAHAVVG"
BASE COUNT          906 a         1929 c         1872 g          851 t
ORIGIN      
        1 tgctgcgagg gtcgcggacg cgcctcgatg cgccatcgtg acgacgaacc gggcgcggat
       61 caagcgcggc ctcctgacgc cgcggtgacc ggctgcggac gatgcgcgac gcctcctgcc
      121 gccgccacgc tggcctcgag aacgcgcgcg acatgcagcg ccgagcggcc gcagccgtca
      181 cggatctggt ggcggcatga ggtgccgtcg gcgacgatca gcgtcgcatc gtcggcggcc
      241 cggacggccg gcaacagcga cagctcggcc atggccaacg acgcgtcgat cgtatcgacc
      301 gcgtagccga acgatcccgc catgccacag cagctcgact cgacggtctc gacgccgagc
      361 ccgggcacca gcttgagcac cgcctccacg gcgccggtgg cgccgaagga tttctggtgg
      421 cagtggccgt gcaagagcgc cttctgggca atcggcgcga gctgaagcgc aagacgcttg
      481 tccttcgctt cgcgcgccaa aaactcctcg aacaagacgg cctgcgcgct caggcggcgc
      541 accgcatcgc ccttcagcat cgccggcgct tcgtcacgaa acgtgtagag gcaactcggc
      601 tcgagtccga tcaccggcac gccacgcgcg aggaacggcg cgagcgtggc gagcacccgc
      661 tcgatctcgc gcttcgtctc atcgacccgg ccgaccgcca gaaaggtgcg gccgcagcac
      721 aagggccggg aggcgccgtc ggcgggcctg gggacgtgga cgcggtagcc ggccgtggtc
      781 agcacggtca gcgcggcatc gagattctcg cgctcgaaat agcggttgaa ggtgtcggcc
      841 aggagcacga cctcgcgccc gccttcaggc ccggccgcgg cctcgcgatc gcgaaacaca
      901 tcacggcgcc agtgcggcag gctgcgccgg gcgctgaagc cggcgagcgc ttccgagagc
      961 ttcgcgaagg caggcacggc attgcgcaga ttcagcagcc atggggccct ggcggcgacc
     1021 ggggcatagc gcggcagcca gccgatcagg cgctggtgca gggtgtggcc gtagcgctgc
     1081 gcgcgcgccg ccagcacctc gatcttcatg cgcgcgatgt cgacgccggt cgggcattcg
     1141 cgtcggcatg ccttgcacga cacgcacaat ttcaaggttt ccgccatgcc gtcggacgtg
     1201 aaggcatcgg ggccgagctg cccggaaatg gcgaggcgca gggtattggc ccgcccgcgc
     1261 gtcacgtcgc gttcgtcgcg cgtgacgcga taggacgggc acatggcgcc cccggcgagc
     1321 ttgcggcagg caccgttgtt gttgcacatc tcggcggcgc cctgcagacc gccggccgtg
     1381 ccgggatacc cggaccagtc gagggcgatt ggccggtcgt gcggctggta atgcggcccg
     1441 tagcgcagca gcccgcgggc gtcgaatttc ggcgcgcgca cgatcttgcc aggattgagc
     1501 acgccttccg gatcgaagcg gtccttcact tcctcgaagg cacgcaccag acgcgtgccg
     1561 aacatcgtct cgtggaattc ggaacgcagg atgccgtcgc cgtgctcgcc ggaatgcgag
     1621 cctttgtagg cgcgtaccag cgcgaatgct tcctcggcga tggcgcgcat cgccttgatg
     1681 tccttgtcga gcttgaggtt caggatcggg cgcacgtgca ggcagccgac cgaggcatgc
     1741 gcataccagg tgccgcgcgt gccgttcttc tcgaatatct cggtgagccg cgcggtgtaa
     1801 tccgcgagat gctcgagcgg cacggcacag tcctcgacga aggacacggg tttgccctca
     1861 tccttcatcg acatcatgat gttgagcccg gaggtgcgca cgtcggccac cgccgcctgc
     1921 aggcccgcgt cggcaatctc gacgacgccg ccccaatgcg gcccgctctt gtcccagccg
     1981 aagccgagat cgcccatcag ctcgcgcagc tgcgcgagcc ggcgctggtt ctccgcgtcg
     2041 ttctcggcga actcgacgag caggaccgcg tccggctcgc cgcgcacgaa ctgttcgagc
     2101 gtcgggcgga acatggcgat gtcgcgggca agctcgatca tggtgcggtc gacgagctcg
     2161 acggcgatcg gcccgagcct gacgatatgc tgggccgcat ccatggcttc gtagaagcgc
     2221 ccgaaatggc acgcgccgac gacgcgcctg ccgagcaccg gccagagctt cagctcgacc
     2281 tgcgtcgaga aggccagcgt gccctccgag ccgacgagga tatgggcgag gttgatgtcg
     2341 ttgcggcccg gcgtgagcgc gtccagattg tagccgccga cccgtcgctg cactttcggg
     2401 aagcgcgcct cgatctcggc ggcctcgcgc gccccgatgg cgagcaggtc gcgtgccagc
     2461 ggccgcaggc tcgcatcggc cggcaggtcc gacaggtcgt tggcgacccg cccaaaatgc
     2521 atcggcgtgc cgtcggccag cacggcgtcg atcgacagca cgttgtcgcg catcgtgccg
     2581 tagcgcagcg aacggccacc gcaggagttg ttgccggcca tgccgccgat ggtggcgcgc
     2641 gaggcggtcg agacgtcgat cggaaaccac aggccgtgcg gcttgagctg gcggttcagc
     2701 tcgtcgagca cgatgcccgg ctcgaccacg cagcgtcgcc cggcgacgtc gagatcgaga
     2761 atgcgcgtca gatacttcga gcagtcgacg accagcgatt cgttgatggt ctggccgcat
     2821 tgcgaggtgc cgccgccgcg cggcgtcacg cgcacgccct cctcgcgggc cagcgcgatg
     2881 gcacgctctg cctcggcgac gctgcgcggc gtcaccaccc caagcggcat gatctggtag
     2941 gcggaggcgt cggttgcata gcgcccgcgg gtgaagcggt cgaacatcac ctcgccggtg
     3001 acctcggcct tgaggcgccg ctccagtccg ggcatcacct ttgccgccat caactcttcc
     3061 ctttccaggg cgcccgtcgc gcgtcgcgca cgtgcagtat cacgatctcg ccgccatcag
     3121 gcgagcgctc gttgagatag ctgaagattg catcgaggtc ggcctgtgcg cgccgcgagt
     3181 agcggattct catgcgcctc gtcgccggaa gaactcgacc atttcctcat cgctgactaa
     3241 ttctccacgc tcagcctgct ccagcccttc ccggatagcg gcgcgggtct cctcgtcgag
     3301 ttcttcgggc tcgtcggcct ttgcggcaag gacaaacaaa atctcggcag cctcgtcctg
     3361 ggcggcgtcg ggcagttccc ggattttggc gatggcctga tcgagcagct ttgtcatggg
     3421 gcgcaatcta gcataatcat ggcggcggtc acgactttca gtcgcgaata gccctctttc
     3481 cgagccctga gccaagccca tgccccagaa cgtctcccgc acggcgggcc gtcatttcct
     3541 gcagatcccc ggcccgacgc cggtgcccga ccgcatcctg cgggccatgg acaagccgac
     3601 catcgaccac cgcggccccg agttccaggc gctcggcaag cgcgtcctcg atgggctcaa
     3661 gacaatcttc aagacatcag ggccggtcat catctacccc gcctcgggca ccggcgcgtg
     3721 ggaggcggcc ctgatcaaca cgctctcgcc cggcgaccgc gtgctgatgg tcgagaccgg
     3781 ccacttcgcg acgctgtgga agaacatggc cgtcaagctc ggcatcgagc ccgagttcat
     3841 cgccaccgac tggcgcatcg gggccgacgc cgccgccatc gaggcgcgcc tgaaggagga
     3901 cggtcagcac gccatcaagg cggtgtgcgt cgtgcacaac gagacctcga ccggctgcac
     3961 gtcgcgcatc gacgaggtgc gccgcgccat cgacgcggcg cggcacccgg cgcttctcat
     4021 ggtcgacacg atctcctcgc tcggctcgat cgactaccgg cacgaggaat ggggcgtcga
     4081 cgtcaccgtc gccggctcgc agaaaggcct aatgctgcca ccgggactct ccttcaacgc
     4141 cgtcagcgac aaggccctca aggcggccaa gcagtcgaag ctgccgaagc tgttctggtc
     4201 gtgggaggag atgctgccgc acaaccaaaa cggcttcttc ccttacacgc cggccaccaa
     4261 ccttctctac ggcctcgccg aggcgatcga catgctgcac gaggaggggc tcgagacggt
     4321 gttcgcgcgc cacgaccgcc atgccgaagc gacgcgccgc gccgtgcgcg cctggggcct
     4381 cgaggtcctg tgccgcgagg cgaaatatta ctcgtcgtcg ctcacggccg tgctgatgcc
     4441 ggacggtcat aacgcagacg cgttccgcca gatcgtgctc gagcgcttcg acatgtcgct
     4501 cggcacgggg ctgtcgaagc tcgccggtaa ggtgtttcgc atcggccacc tcggcgacac
     4561 caacgacctc accatcctcg gcgccctggc cggcgtcgag atgggtctcg ggctcgccgg
     4621 cgtgccgcac aagaagggcg gcgtgcaggc ggcgatggat tatctcgccg atccgcagcg
     4681 tgccgtgcgc gccgccgcgg aatagaggag cgcttcgcct gcattatcgc agcgtcagca
     4741 gatatgcggc gacgtggcgt gcctcggctt cggatattcc ggtgcgcggc atcgccgtcg
     4801 tcgggctcac tgcgcgcgga ttgacgatcc agcgcacgag attgtccgga cgattgggga
     4861 gcacgccgcc gatatagacg cggccggcga atttctgcag cggcggcccg acgagcccgt
     4921 tggcgctgcg cacgccgggg atcgtgtgac agccgccgca gccgtagcgc gtgatgagcc
     4981 gcgatgcctg gtcggggttg ccgccggtca aagccgcggc gtcggatttg gccttctcct
     5041 ggcgcttgta ttcataagcg ccataggccg ctccggcgcc tgcgaccagg acagcggcga
     5101 ggctcgcaag aacggtccgc ttagccgacg acggcatgcg cccctccccg tctcgcggcc
     5161 gctccggatc gcgcgatcca caacccggcc aggaccagcg ccgccgccgc ataaacgagg
     5221 cccgccggga tccacatgat gaggcccgcc agctgctggt cctcgagcgg ggtgaggccc
     5281 cattcgagcg cggttcgcgt ctggacggga taaagcggct gcctggccag cgcgagcagg
     5341 atgccgagga agccggtatg cagcgaggtg gcgaacaggt agatcaccgc cgccccgtag
     5401 ccgcgctcgc gcgccctgcc gcgcagcagc gaccaccaga acaacagcgc ggtcgcgaaa
     5461 aagctcagat gctgcagcca gtgcaggcgg cccgaggcga gcgccgcctc gtagagcgcc
     5521 gggatgtgcc acgtccacaa tgcgacccca tgcacaat
//
LOCUS       DATAIQ010000176         2235 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_101413, whole genome shotgun sequence.
ACCESSION   DATAIQ010000176 DATAIQ010000000
VERSION     DATAIQ010000176.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2235)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2235)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2235
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_101413"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..867)
                     /locus_tag="VHN20_03015"
     CDS             complement(<1..867)
                     /locus_tag="VHN20_03015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013529684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030554 - adenyl nucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-containing alcohol dehydrogenase"
                     /protein_id="HEX2724772.1"
                     /translation="MMQLRGNWNYPTSVRFGAGRIAELGDAVRSAGMRRPLLVTDPRL
                     AAMPMVGNALAALQAEGIACNVFSDVRPNPVAANVESGVGALKAGGHDGVIAFGGGSA
                     LDVGKLIAFMAAQTRPIWDFEDIGDHWRRAEARGIAPIVAVPTTAGTGSEVGRAGVVT
                     NEATHTKTVVFHPLMMPKVTICDPELTIGMPPAITAGTGMDALAHCLEAYCGPSYHPL
                     ADGIAVEGMRLVKESLARAVRDGQDIEARAHMMSAALMGATAFQKALGAIHALSHPVG
                     ALHDTHHGMTNAV"
     gene            complement(957..2222)
                     /gene="phnA"
                     /locus_tag="VHN20_03020"
     CDS             complement(957..2222)
                     /gene="phnA"
                     /locus_tag="VHN20_03020"
                     /EC_number="3.11.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020186332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047400 - phosphonoacetate hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0019636 - phosphonoacetate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonoacetate hydrolase"
                     /protein_id="HEX2724773.1"
                     /translation="MNIDKRTTSVTVNGRQYRWPQAPTVVVCIDGSEPGYIERAIERG
                     LAPNLGRLMRNGTNLLAHSVIPSFTNPNNISIITGRPPAVHGIAGNYFLDPATGEEVM
                     MNDARFLRAETVMKGFHDAGARVAVVTAKDKLRTLLGHGLDMRTARAIAFSSEKADKA
                     TVAENGITDLLDFVGMALPHVYSAELSQFVLAAGVRILDTHRPDLMYLSTTDYVQHKA
                     APGSDMANAFYAMLDRHVGELDAAGCVLALTADHGMNDKHRSDGEPDVLYLEEVLEGW
                     LGRDAARVILPITDPYVVHHGALGSFATIYLPNSAAAADVIVRLQGLEGVALALTRDE
                     ACRRFELPPDRIGDVVVISTLHKVLGTRPAKHDLSGLTEPLRSHGGVTEQVVPMILNR
                     KAELPNGRSLRNFDVFDVALNHVGAHNSS"
BASE COUNT          346 a          748 c          777 g          364 t
ORIGIN      
        1 cacggcgttg gtcatgccgt gatgcgtgtc gtgcagcgcg ccgaccgggt gcgacaacgc
       61 atggatggcg ccgagcgcct tctggaaggc ggtggccccc atgagcgccg ccgacatcat
      121 gtgcgcgcgc gcctcgatgt cctggccgtc gcggacggcg cgggcgaggc tctccttaac
      181 caggcgcatg ccttcgacgg cgatgccgtc ggcgagcggg tgataggacg ggccgcaata
      241 cgcctcgagg caatgcgcca gcgcatccat gcccgtcccg gccgtgatcg cgggcggcat
      301 gccgatcgtc agctcgggat cgcagatcgt gaccttcggc atcatcaagg ggtggaagac
      361 caccgtcttg gtgtgcgtcg cttcgttggt gactaccccc gcgcggccga cctcggagcc
      421 ggtcccggcc gtcgtcggca ccgccacgat cggcgcgatg ccgcgcgcct cggcgcgcct
      481 ccagtgatcg ccgatatcct cgaagtccca gatgggccgc gtctgcgccg ccatgaaggc
      541 gatcagcttg ccgacgtcga gcgccgaccc gcccccgaag gcgatcacgc cgtcatggcc
      601 cccggccttg agcgcgccga cgccgctctc gacgttggcg gcgacgggat tcggccgcac
      661 gtcggagaaa acattgcagg cgattccttc agcctggagc gcagcgagcg cgttgcccac
      721 catcggcatc gccgccagcc gcgggtccgt caccagaagc gggcgccgca tgccggcgct
      781 gcgcaccgcg tcgccaagct cggcgatgcg gcccgcgccg aaacggaccg aggtcgggta
      841 attccagttg ccgcgcagct gcatcatatg tccctgacga ggcggcgtcc ctgtcggcgc
      901 cggaacggtc gtgctcaatc gctcatcgac ggtcgcaagc ggccatgaca ccgaacctaa
      961 gatgagttgt gcgcgccgac atggttgagg gcgacgtcga agacgtcgaa gttgcgcagg
     1021 ctgcggccgt tcggcagctc cgccttgcgg ttcaagatca tcgggacgac ctgctccgtg
     1081 acgccgccat gggagcgcag cggctcggtc aggcccgaca ggtcgtgctt ggccggccgt
     1141 gtgcccagca ccttgtgcaa ggtcgagatg accacgacgt cgccgatgcg gtccggcggc
     1201 agctcgaagc gccggcaggc ctcgtcgcgc gtcagggcca atgcgacgcc ttcgagccct
     1261 tgcagcctga cgatgacgtc cgccgcggcg gcgctgttcg gcaggtagat cgtggcgaac
     1321 gagccgagcg cgccgtgatg cacgacatag ggatcggtga tcggcaggat cacccgcgcc
     1381 gcatctctcc cgagccaccc ttccaggacc tcctcgagat acagcacgtc cggctcgccg
     1441 tccgaccggt gcttgtcgtt catgccgtga tcggcggtga gcgcgagcac gcagccggcc
     1501 gcgtccagct cgccgacatg gcggtcgagc atcgcgtaga acgcgttggc catgtccgag
     1561 ccgggggcag ccttgtgctg cacgtagtcg gtggtcgaaa gatacatgag gtccggccga
     1621 tgcgtatcga gaatcctgac gccggccgcg agcacgaatt gcgacagctc ggccgaatag
     1681 acgtggggca gcgccatgcc gacgaaatcg agcagatcgg tgatgccgtt ctccgcgacc
     1741 gtcgccttgt cggccttctc cgacgagaac gcgatggcgc gcgccgtgcg catgtcgagg
     1801 ccgtggccga gcaaggtgcg cagcttgtcc ttggccgtga cgaccgcgac ccgcgcgcct
     1861 gcgtcgtgga agcccttcat gacggtctcc gcgcgcagaa agcgcgcatc gttcatcatc
     1921 acctcctcgc ccgtggcggg atcgagaaaa tagttgccgg cgatgccgtg cacggcgggc
     1981 ggtcggcctg tgatgatcga gatgttgttc gggttggtga agctcgggat gacggagtgc
     2041 gcgaggaggt tggtgccgtt gcgcatcagc cgcccgaggt tcggcgcgag tcccctctcg
     2101 atggcgcgct cgatatagcc gggctccgag ccgtcgatgc agacgacgac cgtcggcgcc
     2161 tgcggccagc ggtattggcg gccgttcacc gtgacggacg tcgtccgttt gtcgatgttc
     2221 atgagggaat ccagc
//
LOCUS       DATAIQ010000177         2190 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_286347, whole genome shotgun sequence.
ACCESSION   DATAIQ010000177 DATAIQ010000000
VERSION     DATAIQ010000177.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2190)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2190)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2190
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_286347"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(495..734)
                     /locus_tag="VHN20_03025"
     CDS             complement(495..734)
                     /locus_tag="VHN20_03025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724774.1"
                     /translation="MKYLLIIAAVLAGDPASVDPRLEVLTQVFPDLATCEEARKASTG
                     EGKGEIGGNKVLRIVGQCQELDAPDVQKLKDGLNG"
     gene            complement(798..2048)
                     /locus_tag="VHN20_03030"
     CDS             complement(798..2048)
                     /locus_tag="VHN20_03030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020180670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp70 family protein"
                     /protein_id="HEX2724775.1"
                     /translation="MAACGLDFGTSNTTLGLSHGGVPTLIALEGDEVTIPSAVFFTPG
                     SEVRIGRAAIAAYVDGLPGRLLRGLKSVLGSSFVEEETQVGRLRLPFREVIARYVGAV
                     KRRAEAEAGRELVSVVHGRPVHFVDGDPEGDRSAEATLRDIAHAIGFRDVSFQFEPIA
                     AALDYERQIGSEQIALIADIGGGTSDFSIVRLGPERHRLDDRSGDILANGGVRIGGTD
                     FDRQLSLGTIMPLLGYRSAMKRPGLDVPSNYFHELATWSSINRLYNRRIHRELQEVRR
                     DAAQPQLIERLLRVVETERGHALAMEVEDAKISLSGEPETDIRLGWIEPDLDVRLERQ
                     ELAAYTRELARRIAERIGLCMRQAALSADRIDALFLTGGSTQIPHVRAAVMAAAPRAK
                     VVEGDTFGSVGKGLTLEAARRYGR"
BASE COUNT          347 a          744 c          737 g          362 t
ORIGIN      
        1 ccgagtcgat ggtcaacttg cgctgcgcat tcaagaactc ttcatcggtc atgtcttgct
       61 ccctccgcta tcccgcatca gcccagccgc cgcgttgcga tatgttcgga cctccgactt
      121 gcccgcggtg gtcctgcaac cgcggccgca acgcgagccg ctccgccgca ggggcgcttg
      181 cctggttgac caggggccgg gctcgccgtc gacgcccgcg tcggtgcagg ctccggctta
      241 aaggccgcaa ggcagcgcgc agggcttcgc tcgaggtcaa gtctggcgtc gacacgccgg
      301 cgcatgcgaa cctccttttg ggggccgaaa ccggcttccc cactcggcag gacgcgatcc
      361 gaccagccac gatggcgcag cctgtggtgg cggacataaa gctaaggttg aggctacgtc
      421 actccacgcc gcagtcaagc gggcgcttgc cgcgcaaggc ctgggctttc gggcgtgcgg
      481 cttgcgctcg cggcttaccc gttgagcccg tccttgagct tctgcacgtc tggtgcgtcg
      541 agctcctggc actggccgac gatgcgcaga accttgttgc cgccgatctc gcccttgcct
      601 tcgccggtcg acgccttcct ggcttcctcg caggtcgcca gatcgggaaa aacctgcgtc
      661 aggacctcga ggcgcggatc gacggaggcc ggatctcccg cgagcacggc ggcgatgatg
      721 agaagatact tcatggctgc tgccattctg gagcaacggg cgagagcgaa caaggcgctt
      781 cggttcacag ggctgcgtca gcgtccgtag cggcgggcgg cctcgagggt caggcctttt
      841 ccgaccgacc cgaaagtgtc gccttcgacg actttcgcgc gcggcgcggc ggccatgacg
      901 gccgcgcgca catgcgggat ctgggtcgag ccgccggtga ggaacagcgc gtcgatgcgg
      961 tcggcggaca acgccgcctg gcgcatgcac aggccgatcc gctcggcgat gcgccgcgcc
     1021 agctcgcggg tgtaagcggc aagctcctgc cgttcgaggc gcacgtcgag atccggttcg
     1081 atccagccga gacggatatc ggtctccggc tctccggata ggctgatctt ggcgtcctcg
     1141 acttccatcg ccagagcgtg gccgcgttcc gtctcgacga cacgcagcaa ccgctcgatc
     1201 agctgcggct gggccgcgtc gcggcgcacc tcctgcaact cgcgatggat gcggcggttg
     1261 tagagccggt tgatgctcga ccacgtggcg agctcgtgaa aatagttcga gggcacgtcg
     1321 agcccggggc gcttcatggc gctccggtag ccgagaagcg gcatgatcgt tccgaggctc
     1381 agctgccggt cgaagtcggt gccgccgatg cgcacgccgc cattggcgag gatgtcgccc
     1441 gacctgtcat ccaggcggtg gcgctccggg ccgagcctga cgatcgagaa atccgacgtg
     1501 ccgccgccga tatcggcgat cagcgcgatc tgttccgatc cgatctggcg ctcgtaatcg
     1561 agcgccgccg cgatcggctc gaactggaac gagacgtcgc ggaagccgat cgcgtgagcg
     1621 atgtcgcgga gcgtggcttc cgcgctgcgg tcgccctcgg ggtcgccgtc gacgaagtgg
     1681 accggccggc catgcaccac cgagacgagc tcgcggccgg cttcagcttc cgcgcggcgc
     1741 ttcacggcgc cgacgtaacg ggcgatgacc tcccggaacg gcaggcgcag ccggcccacc
     1801 tgggtctcct cctccacgaa ggagctgccg aggaccgact tcagcccgcg cagcagccgg
     1861 ccgggcaggc cgtcgacata agccgcgatc gccgcgcggc cgatacggac ctcgctgccc
     1921 ggcgtgaaga acacggcgct cggaatcgtg acctcgtcgc cttcgagggc gatcagcgtc
     1981 gggacgccgc catgggacag gccgagcgtc gtgttcgacg tgccgaaatc gaggccgcag
     2041 gctgccacac acatctccgg gaagggaatc gtcgctaaag cgggatcaat tcagatcgaa
     2101 tcgatcccgc tccgcttctc attgaggcgc atgatcccgg atcaagtccg ggacaagcct
     2161 ttttcggcga agcggtgtcc acccccggat
//
LOCUS       DATAIQ010000178         3253 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_101470, whole genome shotgun sequence.
ACCESSION   DATAIQ010000178 DATAIQ010000000
VERSION     DATAIQ010000178.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3253)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3253)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3253
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_101470"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..381
                     /locus_tag="VHN20_03035"
     CDS             <1..381
                     /locus_tag="VHN20_03035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018447343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CpaF family protein"
                     /protein_id="HEX2724776.1"
                     /translation="GSMATVHANNPREAISRLEQMIGMAGLPMSQTSIRGQISAAVRM
                     IVQLQRLADGKRRVTSVAEITGMEGDIIQMQEIFKYVRTGTDPDGTVHGHHMATGVRP
                     RFLQDLVAQGINIPGSYFDPSKPL"
     gene            386..1354
                     /locus_tag="VHN20_03040"
     CDS             386..1354
                     /locus_tag="VHN20_03040"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HEX2724777.1"
                     /translation="MPFDLDPLYVFYAMAALAAVLAAEAVYLLFHNTKSYRGRVNRRL
                     QVSGKEQNREKVLVQLRRERGLSADGDHVLGVASLNRLIVQSGVKAEPTRIALILAVV
                     GAVAFLGILRFRGNAIEALGGTVLAMIVFPFAALLYMRKKRRAKFGAQFPDAIDIIVR
                     SLRAGHPVPVAIGMVARELPDPVGTEFGMIADEITYGSDLETALRTMMSRVGQEDLPL
                     FVTSVGIQATTGGNLSQILDNLSKVIRERFKMRRKIKGLSAEGRAGAMILNVTPLGVV
                     TLVSVVNPGYYGDVWHLPATKYAFAGALVWMLIGNLIMRKMINFKI"
     gene            1364..2329
                     /locus_tag="VHN20_03045"
     CDS             1364..2329
                     /locus_tag="VHN20_03045"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HEX2724778.1"
                     /translation="MDTLASLIEVVAEDTMVLGLLALCGIGLAGLVAASFVQARKDVR
                     RRASAPAEGPAGVRMQPARAEARRSLDTLMTYVETNFASGDGHENRVLRRQLIQAGFY
                     DQKAVAYYFAARVGVAAVLAVAGLLVLPLAFDQMGSSTVWMWTAILALVGYLTPSYYL
                     GRRIKQRAAQHREGFPDFMDLMVVCAEAGLSMEAAIDRIAREMVEGHPSLAENLYMAC
                     LEIRAGKAFPEALERLGERLGIEEASMLATLLQQSAELGTSLSQSLRVYSDEMRNKRM
                     SRAEEKAYALPAKLVVPLTLFVFPVLIITLMVPAVVRMMVAFSGG"
     gene            2357..2875
                     /locus_tag="VHN20_03050"
     CDS             2357..2875
                     /locus_tag="VHN20_03050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010909733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX2724779.1"
                     /translation="MRLARIRSAIVVAPLVVAFAALGGCSAGLSGDITTGAIAGASAP
                     PASKPLDAVKDDLTLGKEHFRAGNFGLAEMHFRKAVETSAGNPEAWLGLAAAYDEMKR
                     FKLADRAYGEAFKLTGPSPEILNNRGYSYMLRGDLRRASKDLSAAAALDPDNERIQNN
                     LKILDRNARKRV"
BASE COUNT          563 a         1091 c         1036 g          563 t
ORIGIN      
        1 ggctcgatgg cgaccgtcca cgccaacaac ccgcgcgagg cgatctcgcg cctcgagcag
       61 atgatcggca tggccggcct gcccatgagc cagacctcca tccgcggaca gatctccgcc
      121 gccgtgcgca tgatcgtgca gctgcaacgc ctcgcggacg gcaagcggcg cgtcacgtcg
      181 gtcgccgaga tcaccggcat ggagggcgac atcatccaga tgcaggagat cttcaaatac
      241 gtgcgcaccg gaacggaccc ggacgggacg gttcacggcc accacatggc cacgggcgtg
      301 cgcccgcgct tcctccagga cctggtcgcg cagggcatca acattccggg ctcgtatttc
      361 gatccgtcaa agccgctttg acgccatgcc gttcgatctc gacccgctct acgtcttcta
      421 cgccatggcg gcgctcgcgg cggtgcttgc cgcggaggcc gtgtacctgc tgttccacaa
      481 taccaagagc taccgcggcc gggtcaaccg ccgcctccag gtgtcgggga aggagcagaa
      541 ccgcgaaaag gtgctggtgc aactgcgccg cgagcgcggc ctctcggccg acggcgatca
      601 cgtcctgggc gtcgcctcgc tgaaccggct gatcgtccag tccggcgtca aggccgagcc
      661 cacgcgcatc gcactcatcc tcgcagtggt gggggccgtc gctttccttg gcatcctgag
      721 attccgggga aatgcgatcg aggcgctcgg cggcaccgtt ctggcgatga tcgtgtttcc
      781 tttcgcggcc cttctctaca tgcgcaaaaa gcgccgcgcc aaattcggcg cccagtttcc
      841 cgatgcgatc gatatcatcg tgcgctccct gcgcgccggg catccggtgc cagtggcgat
      901 cggaatggtg gcgcgcgagc tgcccgatcc cgtcggaacc gagttcggca tgatcgccga
      961 cgagatcacc tacggctcgg atctcgagac cgccctgcgc accatgatgt cccgggtcgg
     1021 tcaggaagac ctgccgctgt tcgtcacgtc tgtcgggatc caggccacca ccggcggcaa
     1081 tctgagccag atcctggaca acctgtcgaa ggtcatccgc gagcgtttca agatgcgccg
     1141 caagatcaaa gggctctcgg ccgaaggccg ggccggcgcg atgatcctca acgtcacgcc
     1201 gctgggcgtg gtcacgttag tcagcgtggt aaatcccggc tattacggcg acgtctggca
     1261 ccttccggcg accaaatatg cgttcgccgg cgccctcgtc tggatgctga tcggcaatct
     1321 gatcatgcgc aagatgatca acttcaagat ctgaggcctc cacgtggaca cgctcgcttc
     1381 cctgatcgaa gtggtggccg aagacacgat ggtcctcggt ctgctcgccc tgtgcggcat
     1441 cggcctcgcc ggtcttgtgg cggccagctt cgtgcaggcg cgcaaggacg tgcgccgacg
     1501 cgcatcggcc ccggcggaag ggccggccgg cgtcaggatg cagccggcgc gcgccgaggc
     1561 acgccgctcc ctcgacacct tgatgacata cgtggagacg aattttgcga gcggcgacgg
     1621 acacgagaac cgcgtcctgc ggcgccagtt gatccaggcc ggattctacg atcagaaggc
     1681 cgtcgcctat tacttcgccg cgcgcgtcgg cgtggcggcg gtgctggccg tcgccggcct
     1741 tctggtcctg ccgctggctt tcgaccagat gggctcctcg accgtgtgga tgtggaccgc
     1801 gatcctcgcc ctcgtcggct acctcacgcc cagctactat ctcggccgcc gcatcaagca
     1861 gcgcgcggcc cagcaccgcg agggttttcc tgacttcatg gacctgatgg tggtgtgcgc
     1921 ggaagccggc ctcagcatgg aagccgccat cgaccgcatc gcccgcgaga tggtcgaggg
     1981 gcacccctcg ctggcagaga atctttacat ggcttgcctc gagatccgcg ccggcaaggc
     2041 ctttccggag gcgctggaac ggctcggcga acgcctcggc atcgaggaag cgagcatgct
     2101 ggcgacgctt ctgcagcagt ccgcggagct cggcaccagc ctgtcgcaat cgctgcgggt
     2161 ctattcggac gagatgcgca acaagcgcat gtcgcgcgcc gaagaaaaag cttacgcgct
     2221 gcccgccaag cttgtcgttc ccttaactct tttcgtcttt cctgtcctga tcatcacgct
     2281 gatggtgccg gcggtcgtcc ggatgatggt ggcgttctca gggggctagg cactgcctag
     2341 ggcggagagg atggggttgc gtcttgctcg catcaggtcg gcgatcgtcg tcgcgccgct
     2401 ggtggtcgcg ttcgccgcgc tcggaggatg ttcggccgga ctgagtggcg acatcaccac
     2461 cggagccatc gccggagcaa gcgccccacc ggcatcgaag ccgctggacg ccgtcaagga
     2521 tgacctcacc ctcggcaagg agcactttcg cgccggcaat ttcggcctcg ccgagatgca
     2581 cttccgcaag gccgtcgaaa cctccgcagg taatccggaa gcctggctgg gactcgccgc
     2641 cgcctatgat gagatgaagc ggttcaagct cgccgaccgt gcctatggcg aggccttcaa
     2701 gctgaccggc ccgtcgccgg agatcctcaa caaccggggt tattcctaca tgctgcgggg
     2761 cgacctgagg cgcgccagca aggacctgag cgccgccgcg gcactcgatc ccgacaacga
     2821 acgtatccag aacaacctca agatcctcga ccgcaacgcc cgcaagcgcg tctgatccgg
     2881 gctccgcgga cgccgggccg cggccgcaga atctcggcga agccggtccc gcccgccgca
     2941 taagatcctc cggcaaagcc aatttcacgt gagtttaaag ggctctaatg agcttggccg
     3001 tggaacggag cattttgcgt tgcattatcg ctagagcatg accggcgaag cgcgaccgcg
     3061 tcgccaaaaa aattcatgcg acacaggcga acgagagcgg gccggcagcg tcaggcatgg
     3121 gtcccgagga gcgatctatg gatgcatcga atcccgtcaa ccgggacgat ccggccgagg
     3181 aacggcctgg accgccgccg agctatatcg cgcgggcctt tttccgcatc gcgctcggct
     3241 tctggtcagg gcc
//
LOCUS       DATAIQ010000179         2457 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_424442, whole genome shotgun sequence.
ACCESSION   DATAIQ010000179 DATAIQ010000000
VERSION     DATAIQ010000179.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2457)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2457)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2457
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_424442"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(155..436)
                     /locus_tag="VHN20_03055"
     CDS             complement(155..436)
                     /locus_tag="VHN20_03055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724780.1"
                     /translation="MRKKSPDRQRMKERWRDVQEISGGPFRIGAIDRHRQFSLLHLAA
                     KARAKGNAEGARTALDMSKAARTEQWVNRLSPMALIEKRHLPRRDSEPR"
     gene            complement(536..1288)
                     /locus_tag="VHN20_03060"
     CDS             complement(536..1288)
                     /locus_tag="VHN20_03060"
                     /inference="COORDINATES: protein motif:HMM:NF024921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HEX2724781.1"
                     /translation="MRRFLLVLSCVLSAPAASAAEVKCFCPVAMRAVFDDLAPKFGQA
                     AEHKLSVDLGTIGANAQRVARGDAADVAVLSPQQIDELVAQGKIIAGSRADIGRVGYA
                     AFVRKGGGKPDLGSADAFKRAVLAAKAIGYGDPALGGPSGIYFASLMDKLGIGAEMKA
                     RTKLYPVGGAAVEAAAKGEIDIAFGPASDITVSPGVDLVPLTGELQSYTRYVAVITRT
                     STEPEAAKALIAFLTSPVGQASLKAHGFEPAQ"
     gene            complement(1474..2124)
                     /locus_tag="VHN20_03065"
     CDS             complement(1474..2124)
                     /locus_tag="VHN20_03065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012631284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family translocator"
                     /protein_id="HEX2724782.1"
                     /translation="MPDLTQLALYFAAALVLAVTPGPGIFYVAARTLAGGRAEGVASS
                     FGTGLGGMVHVFAGSLGVSAIVLASAELFTALKLVGAAYLVWLGIRTFQAARRDASTV
                     LNGGSAAPPIGPRRAFREGVLVEALNPKTAAFFLAFVPQFVDPAAGHVALQFVVLGFV
                     SIALNTLADIVVAFAASRIRQGAAARPALVRRLREASGAAMVALGVGLALAKRPAT"
BASE COUNT          392 a          845 c          850 g          370 t
ORIGIN      
        1 gagtgaggag ggcggcaccc gggggcgcgg ccggcgcaag cgctcttagt ctagccctgt
       61 catcaccggc cttgtgccgg tgatctcgat gtgaagagcg ccgcgcctgt ccgatcggga
      121 tggccggcac aaggccggcc atgacagtga tggatcagcg cggctcgctg tcccggcgcg
      181 gcaggtggcg cttctcgatc agggccatcg gcgagagacg attgacccac tgctccgtcc
      241 gggccgcctt cgacatgtcg agcgcggtcc gggcgccttc ggcattgccc ttggcccgcg
      301 ctttcgccgc gagatgcagc agcgagaact ggcgatgccg gtcgatcgcg ccgatgcgga
      361 acggcccgcc gctgatctcc tggacgtcgc gccagcgttc cttcatccgc tggcggtcgg
      421 gactcttctt acgcatcact gaactcacgc acgcgtgtcc gagcttacgg gcggggccgg
      481 tcggaaggca atggccgcgg cacgagccga cgcccgccct cgcgccgatc ctggtctatt
      541 gcgcgggctc gaagccgtgc gctttcaggc tggcctgtcc aaccggcgag gtgaggaagg
      601 cgatcagcgc cttcgccgct tccggttcgg tgctcgttct cgtgatgacg gcgacatacc
      661 gcgtgtagct ctgcagctcc ccggtcagcg gcaccagatc gacgcccggg ctgacggtga
      721 tatcgctggc cggcccgaag gcgatgtcga tctcgccttt ggcggcggcc tccaccgcgg
      781 cgccgcccac gggatacagc ttcgtcctgg ccttcatctc ggcgccgatg ccgagcttgt
      841 ccatcagact tgcgaaatag atgccgctcg ggccgccaag cgcaggatcg ccgtagccga
      901 tcgcttttgc cgccagcacg gcgcgcttga acgcgtccgc cgagccgagg tcgggcttgc
      961 cgccgccctt gcgcacgaag gccgcatagc cgacgcggcc gatgtcggcg cgactgccgg
     1021 cgatgatctt cccttgtgcg accagctcgt cgatctgttg cggcgagaga accgcgacgt
     1081 ccgccgcgtc gcccctggcg acgcgctgcg cattggcgcc gatggttccc aggtcgacgc
     1141 tcagcttgtg ctccgccgcc tgcccgaatt tcggcgcgag atcgtcgaag acggctcgca
     1201 tcgccaccgg gcagaagcat ttgacctccg ccgcggacgc ggcgggcgcc gagaggacgc
     1261 atgacaggac aagcaggaac cggcgcatag cgaacctcct cttcagggag ggccgagccc
     1321 accgacatcc tcgctcggtg gcctcccgtg cgtctggcta cgatggcgcg cagcgtatgc
     1381 gtggaggaca aaccggaaag aaacgagcct atgccgcttg cgattgcagt caagccgagg
     1441 gcaggagtcg acgagagcgg tgcagcccgg tgatcaggtg gcggggcgct tcgccagcgc
     1501 gaggccgacg ccgagcgcta ccatggcggc gcccgacgcc tcgcgcaggc ggcgaaccag
     1561 cgcgggacgc gccgccgcgc cctgccggat gcggctcgcc gcgaaggcga cgacgatgtc
     1621 ggcaagcgtg ttgagcgcga tcgacacgaa gccgagcacc acgaattgca gggcgacgtg
     1681 gcctgcggcc gggtcgacga attgcgggac gaaggcgagg aagaaggccg ccgtcttcgg
     1741 gttcagcgcc tcgaccagca cgccctcgcg gaacgcgcgc cgcggcccga tcggcggcgc
     1801 cgccgagccg ccgttcagca ccgtcgacgc gtcgcggcgc gcggcctgga acgtgcgaat
     1861 gccgagccag accaggtagg ccgcgccgac cagtttcagc gccgtgaaca gctcggcgct
     1921 ggcgagcacg atggccgaca cgccgaggct gccggcgaag acgtgcacca tgccgccgag
     1981 cccggtgccg aagctcgagg cgacgccttc ggcgcggccg ccggcgagcg tgcgcgcggc
     2041 gacgtagaag atgcccgggc cgggcgtgac ggcgagcacg agcgccgcgg cgaaatacag
     2101 ggcgagctgg gtcaggtccg gcatgccgga gcctctacag gatcacggcc gcagcggcca
     2161 gagcttcaga tagccaaccg ccgtcattcc ggggctcgcc gaaggcgaga gcccggaacc
     2221 cacgactggg cgatacgtgc ttgttcgtgg attccgggct cgcgctgcgc gcgccccgga
     2281 atgacggata ctaccattcc ggaacgcacc gcaatttcag ccccgcttaa tttccctgga
     2341 cgggcggcgc cggaaattta gccccgctta attctgcttc ctccctgcac aattaagtaa
     2401 acttccgcgc caaactctgt catggattcg cgcgcgcgtt ttcatgagac gcgcatg
//
LOCUS       DATAIQ010000180         4240 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_327193, whole genome shotgun sequence.
ACCESSION   DATAIQ010000180 DATAIQ010000000
VERSION     DATAIQ010000180.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4240)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4240)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4240
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_327193"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..628)
                     /locus_tag="VHN20_03070"
     CDS             complement(<1..628)
                     /locus_tag="VHN20_03070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012114397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HEX2724783.1"
                     /translation="MATHSRPLRPGDQVFLVDGNSFLFRAYFQSMNQDRKYNVRPSDG
                     LPTGAVRLFSTKLFQFIREGAAGVRPTHLGIIFDATEETFRKEIYADYKANRNEPPSE
                     LVPQFPLMREAVSAFGLIPIEQGGLEADDLIATYACRASEAGAEVLIVSADKDLMQLV
                     RPGVTFYDPESGLKGKPGYRPERKLDREGVIEKFGVPPEQVPDIQALVG"
     gene            complement(855..1928)
                     /locus_tag="VHN20_03075"
     CDS             complement(855..1928)
                     /locus_tag="VHN20_03075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018041710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase family protein"
                     /protein_id="HEX2724784.1"
                     /translation="MTQVQSATLSGEGDEGRVAWIDLAKGICIVFVVATHATLGVGDA
                     VGREGFMHYVVAFTRPFRMPEFFLISGLFLSRVIDRDWRRYADRRVVHFAYFYLLWLL
                     IYSVVKFQQVSGGTVTGFFEHLAFALVEPFSILWFIYLLGVFSVVTKLLRRAPPYLLL
                     GAAALLEILPIETSWYLLNEFCNRWVYFVAGYLLAPQVFRLADWVAAHRWQAFAALVV
                     WFPVNGYFTMTDSGFPDFPTLASLPFISLALGMAGAIATVFTAVLLVPTRLCAPLRYA
                     GFQALTIYLAFLLPMAATRIILLKLGIIEDVGVISLIVTAVALITPLILERLVRDTPA
                     SFLFKRPAAFRLTPQRVQIQPAE"
     gene            2208..3593
                     /locus_tag="VHN20_03080"
     CDS             2208..3593
                     /locus_tag="VHN20_03080"
                     /inference="COORDINATES: protein motif:HMM:TIGR02122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HEX2724785.1"
                     /translation="MRRYVLFLFRPRYVPVYALLAVLLAGAAFYYFARPAKLTAAVGP
                     RGSAETRLIEALATTVEQQRAKVRLRVSPAEDLKASAEALERNEVDLAVVRPDIRLPV
                     NGLSMAILREDAAVIAAPQASKIEDLPGLAKKRLGVVARHPADRAFMEAILNHYDLAP
                     PTVVIVPIEEGEVGTALTTKTVDAIAFVASPTSAAAENLIAAVTNASGGKMKVIPVAD
                     AEALAQRSPALTVIDIPAGAFKGRPKQPEEEIKTIGVSYRLMARSDLDRITVAEATQY
                     LFQYRQRLAVMTPAANDLKALDTDTATGAALPIHPGAIDYFAREQQTFMERYGDWLWL
                     ALFSMGGISSAAAWVAQQFVRKRRELIDVLLDRLLKILGDARQATMVKELDDLALELD
                     RLVVMAVKYGRNRTTNARSMSALILGIDSARSAIADRRRDMLDHASGAAETSSQAATS
                     LAKTAHTGRRG"
     gene            complement(3601..>4240)
                     /locus_tag="VHN20_03085"
     CDS             complement(3601..>4240)
                     /locus_tag="VHN20_03085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012334334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HEX2724786.1"
                     /translation="AALSFSLWAFVKLASEVLEGDTVTFDRTILLALRNPGDLADPIG
                     PTWLEEVGRDFTALGGHGVLTFVTLATLVYLVMTRKRHAALFVVAAIGGGMLLSTLLK
                     LGFSRPRPDLVPHAARVYTASFPSGHAMLSAVTYLTLGALLARVQPQRRVKAFLIGLA
                     VILTVLVGISRVYLGVHWPSDVLAGWCVGAAWASLCWFVALQLQRQGQVESG"
BASE COUNT          811 a         1360 c         1442 g          627 t
ORIGIN      
        1 ccccgacgag cgcctggatg tcgggcacct gctcgggggg cacaccgaat ttttcgatga
       61 cgccctcgcg gtcgagcttg cgctcgggcc ggtagccggg cttccccttg aggccggatt
      121 ccgggtcgta gaaggtgacg cccggccgca cgagctgcat gaggtccttg tcggccgaga
      181 cgatcagcac ctcggcgccc gcctctgagg cgcggcaggc ataggtcgcg ataagatcgt
      241 ccgcctccag gcctccctgc tcgatcggga tgagcccgaa ggcgctgacg gcctcccgca
      301 tcagcggaaa ctgcggcacg agctccgacg gcggctcgtt ccggttcgcc ttgtagtcgg
      361 catagatctc cttgcgaaag gtctcctcgg tcgcgtcgaa gatgatgccg agatgcgtcg
      421 ggcggacgcc cgcggcgcct tcgcggatga actggaacag cttggtcgag aacaggcgca
      481 cggctccggt cggcagcccg tcggacgggc gcacgttgta tttccggtcc tggttcatgg
      541 actggaaata agcgcggaac aggaacgagt tgccgtcgac caaaaagacc tggtcgccgg
      601 gcctgagcgg acgagaatgg gtagccatgc gaacggatta gcggaacgga gcggggcagg
      661 ccatcggccc gagggtgata taagcgctcg gcgccccgtt tcctatctgc gatcgtcgtt
      721 gcggggcgtg tcgagggcac gagcccgaac cccacgaccg gggtgggccg tcatgaagga
      781 tgtgtcaccc cgggtggtgc gttcccgggt tcggcgcgat ggcgccgccc aggaatgaca
      841 ggggctgggt ggtgttactc cgccggctgg atctggacgc gctgtggcgt cagccggaag
      901 gcggcgggac gcttgaacag gaacgaggcc ggcgtatcac gcacgagccg ctccaggatc
      961 aagggggtga tgagcgcgac ggccgtcacg atcagcgaga tcacgccgac atcctcgatg
     1021 atccccagct tcaggaggat gatgcgcgtc gcggccatcg gcagcaggaa tgcaaggtag
     1081 atcgtcagcg cctgaaatcc ggcatagcgc aggggcgcgc acaggcgcgt cggcacgagc
     1141 agcacggcgg tgaacaccgt ggcgatcgcg ccggccatgc ccaatgcgag gctgatgaag
     1201 ggcaggctgg ccagcgtcgg gaagtcgggg aaaccggagt cggtcatcgt aaaatagccg
     1261 ttgaccggga accacacgac gagcgcggcg aaagcctgcc agcggtgggc tgcgacccaa
     1321 tccgccagcc gaaacacttg cggcgcaagc aggtagccgg cgacgaaata gacccagcga
     1381 ttgcagaact cgttgagcag gtaccacgag gtctcgatcg gcaggatctc gagcagcgcc
     1441 gccgcgccga gcaaaagata tggcggcgcc cggcggagca gcttggtcac caccgagaac
     1501 acgccgagga ggtaaatgaa ccaaaggatc gagaacggct ctacgagtgc gaaggcgagg
     1561 tgctcgaaga agccggtgac ggtgccgccc gacacctgct ggaacttcac gaccgaatag
     1621 atgagaagcc aaagcaggta gaaataggcg aaatgcacga cgcgccgatc tgcgtagcga
     1681 cgccagtcac ggtcgatgac ccgggacaaa aagaggcccg agatcaggaa gaactcgggc
     1741 atgcgaaacg gccgcgtgaa ggcgacgaca tagtgcatga agccttcgcg tccgacggcg
     1801 tcgccgacgc cgagcgtcgc gtgcgtggcc acgacgaaca caatgcatat gcctttcgcg
     1861 aggtcgatcc aggccacccg gccctcatcg ccctccccgc tcagcgtcgc agactgcacc
     1921 tgtgtcatgg tcggtcgccc tttggccccg tgcaccagcc cggcacgctt gcgcgccaaa
     1981 ttggggcaag gatgccagcc tcttgcgttc atcccgcaaa gacaaggcca caagcttggc
     2041 cgcggctggt tctggcgggg ttgtgaacgg aggggactaa cctggcggac agccgttcgt
     2101 gggaatatat acgcattttc tggttaacgg gacaggcccg gcccggtcgc cgaccggcgc
     2161 catgcaacga acactgggct cgtccgtttt agtagcctag gtgattcatg cgccgctacg
     2221 tgttgtttct gttcaggccc cgctatgtgc ctgtctacgc tctgctggcc gtcctgctgg
     2281 cgggagccgc cttctattac ttcgcccgcc ccgcaaaact gaccgccgcc gtcggccccc
     2341 ggggcagcgc cgagacccgc ctgatcgagg ccttggcgac gaccgtcgag cagcagcgcg
     2401 ccaaggtccg cctgcgcgtc agccctgccg aggatctcaa ggccagcgcc gaagccctgg
     2461 agcgtaacga agtggatctt gcggtcgtgc gtcccgacat tcgcttgccg gtcaacggac
     2521 tgtcgatggc gatcctgcgg gaagacgcgg cggtgatcgc ggccccgcag gcaagcaaga
     2581 tcgaggacct ccccggcctc gccaagaagc ggctaggcgt ggttgcgagg catcccgccg
     2641 accgggcgtt catggaggcg attctcaacc attacgatct cgcgccgccg acggtcgtca
     2701 tcgtcccgat cgaggagggg gaagtcggga cggcgctgac cactaagacg gtggacgcga
     2761 tcgcgttcgt ggcgtcgccg accagcgctg cggcggagaa cctgatcgcc gccgtcacca
     2821 acgcatccgg cggcaagatg aaggtgatcc cggtcgcaga cgcggaggcg ctggcgcagc
     2881 gctcgccggc gctgacggtg atcgacattc ctgcgggcgc cttcaaagga cgtccgaaac
     2941 agcccgagga agagatcaag acgatcggcg tgtcgtaccg gctcatggcc cggtccgacc
     3001 tcgaccgcat caccgtcgcg gaggcgactc aatacctgtt tcaataccgt cagcgccttg
     3061 cggtcatgac gcctgccgcc aacgacctca aggcgctcga caccgacacg gccacgggcg
     3121 cggccttgcc gatccatccg ggcgccatcg actatttcgc gcgcgagcag cagaccttca
     3181 tggaacgata cggcgactgg ctgtggctgg cgctgttctc gatgggcggc atcagctccg
     3241 cggcggcgtg ggtggcgcag caattcgtgc gcaagcgccg cgagctgatc gacgtgcttc
     3301 tcgaccggct cctgaagatc cttggcgacg cccggcaagc gaccatggtg aaggagctcg
     3361 acgacctggc gctcgagctc gaccggctgg tcgtgatggc ggtgaaatac gggcgcaacc
     3421 gcaccaccaa cgcacgctcc atgagcgcgc tgatcctcgg catcgacagc gcgcggtcgg
     3481 ccatcgccga ccgtcgccgc gacatgctcg accacgcatc cggcgctgcc gagacgagtt
     3541 cgcaggccgc aacctcgctc gcaaagacgg cgcatacggg ccggcgcggg tagatttgat
     3601 tcagccgctc tcgacctgcc cctggcgctg gagctgcagg gcgacgaacc agcacaacga
     3661 cgcccatgcg gcgccaacgc accagccggc gagcacgtcg ctcggccaat gcacgccgag
     3721 atagacgcgg ctgatgccga cgagcaccgt caggatcacc gcaagcccga tcagaaacgc
     3781 cttcacccgg cgctgcggct gcacccgcgc aagcagcgcg ccgagcgtca gataggtcac
     3841 cgctgagagc atggcatgcc cgctcgggaa actggccgtg tagacccggg cagcatgtgg
     3901 aacgagatca ggccggggcc ggctgaagcc gagcttgagc agcgtcgaca gcagcatgcc
     3961 gccgccgatt gccgcgacga cgaagagggc ggcgtgccgc ttgcgggtca tcacgagata
     4021 gacgagcgtg gcgagcgtca cgaaagtcag cacgccgtga ccgccgagcg ccgtgaaatc
     4081 gcgaccaacc tcctcgagcc aggtgggccc tatcgggtcg gcaagatcgc cggggttgcg
     4141 cagggcaagc aggatcgtgc ggtcgaaggt gaccgtgtcg ccttccagca cttcgctggc
     4201 gagcttgacg aaggcccaga gagaaaagct cagcgcggcg
//
LOCUS       DATAIQ010000181         3397 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_286502, whole genome shotgun sequence.
ACCESSION   DATAIQ010000181 DATAIQ010000000
VERSION     DATAIQ010000181.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3397)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3397)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3397
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_286502"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..252)
                     /locus_tag="VHN20_03090"
     CDS             complement(<1..252)
                     /locus_tag="VHN20_03090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012385062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HEX2724787.1"
                     /translation="MTSGGAERGRVAVIGLGAMGLGMAQALIRAGFDVTGYDVAEAAV
                     ARLAAAGGRPAPSPAVAADDAAVVVSVVVNAAQTEAVLFG"
     gene            complement(301..771)
                     /locus_tag="VHN20_03095"
     CDS             complement(301..771)
                     /locus_tag="VHN20_03095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018480152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,4'-dihydroxyacetophenone dioxygenase family
                     protein"
                     /protein_id="HEX2724788.1"
                     /translation="MVPDIFVGGALELDADDRDWVPQSADVAFKPLVLNVSQGYYVNI
                     LRVRCSGVLSRHRHSGPVHAFTLRGRWHYLEHDWEAKPGDYVFEPPGETHTLIVPDDV
                     DEMATLFHVTGGYTYVDPYGKAVGYEDVFTKLANARAHYERVGLGADYADRLVR"
     gene            1472..2449
                     /locus_tag="VHN20_03100"
     CDS             1472..2449
                     /locus_tag="VHN20_03100"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEX2724789.1"
                     /translation="MRLFPAVCALIASVLGLGPAAAQKWPERTVTLVVPFAAGSATDV
                     LGRVLANALSEQLGANVIVENVSGGGGMTGAARVARAEPDGYQVVLGNIATHAHSQSL
                     YRKPAYNAETDFEHVALVGDLPAILLGRKDVPATTLKEFVDYLKQNQSKLQFGSAGTG
                     SASHLGCALVHAAIGVDVTHVPYRSAPLAMQDMVAGRIDYQCGLLPSPIGQIREGQVK
                     AFALLAASRSSALPDVPTAEEQGMPGLDASAWHGLFLPKGTPVEIVQKLNAATAAALD
                     NPKVQQQFANQGAILPAKDRRSPEALKTFVRIEVERWGKTIRAMNLELN"
     gene            complement(2820..>3397)
                     /locus_tag="VHN20_03105"
     CDS             complement(2820..>3397)
                     /locus_tag="VHN20_03105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724790.1"
                     /translation="GELDDFRAVATLAHTNQVVAIVMTEGISRVSEGAGAMETFLGHG
                     GVSIPVIPGASPNPDRSYQAPAKLRSEWRPTAETLNTLLPAPVPSAERREDIATALRP
                     HIRNCTKISLLVIGPWTSFMRYGSEMLGRVDRIVAQGRPYRDELGGQPRGFNCDYDQD
                     ACYAAFDLLVGRRHRADPNLRADWVDILGSP"
BASE COUNT          573 a         1171 c         1103 g          550 t
ORIGIN      
        1 gccgaacagg acggcctccg tctgggccgc gttgacgacc acgctcacca cgaccgccgc
       61 atcgtccgcc gcaaccgcgg gcgatggcgc cggccggccg ccggcggctg caagacgcgc
      121 gaccgccgct tccgccacgt cgtacccggt aacgtcgaaa ccggccctga tcagcgcctg
      181 tgccatgcca aggcccattg cgcccagccc gatgacggcg accctgcccc gttccgcgcc
      241 cccggaggtc atggcacgct cccgaatatg gccgggccgt gccggccggc cgaacctgcg
      301 tcagcgcacg agccgatccg cgtagtcggc gccgagcccg acgcgttcat aatgggcccg
      361 cgcgttggcg agcttggtga acacgtcctc atagccgacc gcctttccgt acggatcgac
      421 ataggtatag ccccccgtga catggaacag cgtcgccatc tcgtcgacgt cgtccggcac
      481 gatcaaggtg tgcgtctccc cgggcggctc gaacacatag tcgcccggct tcgcctccca
      541 gtcgtgctca agatagtgcc agcgcccgcg cagggtgaag gcgtgcaccg ggccgctgtg
      601 acggtggcgc gacaggacgc cggagcagcg cacgcgcagg atgttgacgt aatagccctg
      661 gctgacgttg agcacgagcg gcttgaaggc cacgtcggcg gattgcggca cccagtccct
      721 gtcgtcggcg tcgagctcga gcgcgccgcc gacaaagatg tccggaacca tgccgacggg
      781 ctgcggcagc tggtaggcca ccttgctcgt gtcgggctgc ggcgtctccg cagccttgct
      841 tccgggcgtt tgcgaaccgg gggacgtcat cgcggcggtt cctcctgcat gcggttgtgc
      901 accagcccga agcccgggcc gacaggttaa gtgaggtccg cgcagacgaa gcgggcaagg
      961 ggttgggcct tgcgcaggat cggcccggcc gcggccacgc tccggtcggc ttcgtcgtgg
     1021 ctttgacgca tgcgctggaa atgccgccat gcgacggcac cgccggcatg tccgaaataa
     1081 atggcccagg ccccatcggg aacccggtct cccggcattg atgcctcgat ctcgcgggcg
     1141 cgcaacgcaa cggcacggtc gatcggaaca taaggagcgg gctcgtcctc ctcacagctg
     1201 ctgcacatgc ggcatagacc ctttgcgatt cagttcatgg ctcggctcgg cgaggccggc
     1261 cggcgaggac gaccgctgca acgaccggga tcttcgatat atgcatgccg cgcgccgcag
     1321 tcgataacga aggcgcatat cggcgacggg gctggcggag cttgcatgcg gccggttttg
     1381 ccgtatgcga aaaggcgcag gcttcgccac cctccttcgc acggcggcgg ggacttgctt
     1441 cgtcccgacg ctgtcccaac ggagttgcct catgcgattg ttcccggccg tctgcgcgct
     1501 catcgcgtcg gtcctcggcc tcggcccggc ggccgcccag aaatggccgg aacggaccgt
     1561 cacgctcgtc gtgccgttcg cggccggcag cgccaccgac gtgctcgggc gggtgctcgc
     1621 caacgccctc tccgagcagc tgggtgccaa cgtcatcgtc gagaacgtga gcggcggcgg
     1681 cggcatgacc ggggcggcac gcgtcgcccg ggccgagccg gacggctacc aggtggtgct
     1741 cggcaacatc gccacgcatg cgcacagcca gtcgctctac cgcaagcctg cctacaacgc
     1801 cgagaccgat ttcgagcacg tggcgctggt cggcgacctg cccgccatcc tgctcgggcg
     1861 caaggacgtt ccggcgacga cgctcaagga attcgtcgac tacctcaagc agaaccagtc
     1921 gaagctgcag ttcggctccg ccggcaccgg ctcggcctcg catctcggct gtgcgctggt
     1981 ccacgccgcc atcggggtcg acgtcacgca cgtcccctat cgcagcgcgc cgctcgccat
     2041 gcaggacatg gtcgccggcc gcatcgatta tcaatgcggg cttctcccct ctcctatcgg
     2101 ccagatccgg gaggggcagg tcaaggcgtt cgcgctgctg gcggcatcgc gttcctcggc
     2161 gttgccggac gtgccgaccg ccgaggagca gggcatgccg gggctcgacg cgtccgcctg
     2221 gcacggcctg ttcctgccga agggaacgcc cgtcgagatc gtgcaaaagc tcaacgccgc
     2281 caccgccgcc gccctcgaca acccgaaggt gcagcaacag ttcgcgaacc agggcgccat
     2341 ccttccggcg aaggaccgcc gctcgcccga ggcgctgaaa accttcgtca ggatcgaggt
     2401 cgagcgctgg gggaaaacga tccgggcgat gaacctggag ctcaactaac tgcgagctcg
     2461 tcctcgacgg cgagcccgtg accaccacag aggtgaatcc ggtctcagcg atttcccagt
     2521 ggtgctcccg cctggcgcat ataattggcg aggatgctgc ggatagtggc ggcaggcatg
     2581 caaggctcga gatgtccacc acgaacggcg aagagctcgg gccggaggag atatagcgcc
     2641 gcaaggtcat cccagagcga gctccttacc caaccgcgat ggttcttgtt cagcatcttt
     2701 ccgacgagcg cagccatgcc gcccatgcct tccagatctt cggcccaact cgcaagcggc
     2761 gtgaatgccc agaccttgtc gccctttgca tcgatccccg cctccgcgga gccgcaggtt
     2821 taagggcttc ccaggatatc aacccagtcc gcccgcaggt tcggatcggc gcggtgccgc
     2881 cgaccgacga gcaagtcaaa agcagcgtag caggcgtcct gatcgtagtc gcaattgaat
     2941 cctcttggtt ggccacccag ctcgtcgcga tacggccgtc cttgcgcgac gatccgatcg
     3001 acgcggccga gcatctcgga gccataacgc atgaaggacg tccacgggcc tatcaccagc
     3061 agcgagatct ttgtgcaatt cctgatgtgc ggacggaggg ctgtcgcgat atcctcacgg
     3121 cgttcggcag atgggaccgg tgcagggagt aacgtattga gagtctcggc cgtcggacgc
     3181 cactccgacc tgagctttgc gggcgcctgg tagctccgat ccgggttagg gctggcaccc
     3241 gggatcacgg gtatggagac gccgccatga ccgagaaaag tttccatggc ccccgctcct
     3301 tcggaaactc tggagatgcc ctccgtcatg acgatggcga ccacctgatt ggtgtgggca
     3361 agtgttgcca ccgcacgaaa gtcgtcgagc tccccgt
//
LOCUS       DATAIQ010000182        10390 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_50356, whole genome shotgun sequence.
ACCESSION   DATAIQ010000182 DATAIQ010000000
VERSION     DATAIQ010000182.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 10390)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10390)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10390
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_50356"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..468
                     /gene="glyA"
                     /locus_tag="VHN20_03110"
     CDS             <1..468
                     /gene="glyA"
                     /locus_tag="VHN20_03110"
                     /EC_number="2.1.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007560429.1"
                     /note="catalyzes the reaction of glycine with
                     5,10-methylenetetrahydrofolate to form L-serine and
                     tetrahydrofolate; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HEX2724791.1"
                     /translation="IAAKAVAFGEALRPEFKLYARAVTENAKVLAATLTAGGYDLVSG
                     GTDNHLMLLDLRSKKLTGKAAEAALSRAHITCNKNGVPFDPEKPMITSGIRVGSPACT
                     SRGFGVAEFKRVGELIIEVLDGLARNGEDGNASVEAGAKDRAQDLTRRFPIYG"
     gene            493..993
                     /gene="nrdR"
                     /locus_tag="VHN20_03115"
     CDS             493..993
                     /gene="nrdR"
                     /locus_tag="VHN20_03115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007560431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0140110 - transcription regulator activity
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator NrdR"
                     /protein_id="HEX2724792.1"
                     /translation="MRCPYCGSLETQVKDSRPTDDAAAIRRRRICPDCGGRFTTFERV
                     QLRELTIVKRSGRRVPFDRDKLQRSIEVALRKRPVDPERVERMINGIVRQLESRGDSD
                     VPSEAVGELVMEGLKGLDDVAYVRFASVYKNFREAKDFEELIGELTSEEPTDGPPPRR
                     PARSGA"
     gene            1056..2138
                     /gene="ribD"
                     /locus_tag="VHN20_03120"
     CDS             1056..2138
                     /gene="ribD"
                     /locus_tag="VHN20_03120"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015931750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA];
                     GO_function: GO:0008835 -
                     diaminohydroxyphosphoribosylaminopyrimidine deaminase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HEX2724793.1"
                     /translation="MRMAIALGERHLGRTWPNPSVGAVVVAGGTEPRIVAQGITGAGG
                     RPHAERIALDAAGAAARGATLYVSLEPCAHHGKTPPCVDAIMAAGIARVVTSLEDPDA
                     RVRGRGHAVLHDAGIALTTGVLAGEAGRAHRGHIWRVVHGRPFVSLKLARTADGYAAR
                     IAGPRLMISGETAIARVHMLRAHADAILVGVGTILADDPLLTVRLPGLEDRSPVRVVF
                     DSRLRTPSGANVVVGARQVPTWIVTTPGAPAEAERALLAGGVEILRVAADAAGQLDPR
                     AALAALAERGITRIFTEGGPSLAECFARADLLDEVMISTSPNALGEPGRPAVGRDLQA
                     HIDAHFHNVWSEMVGSDRLDAFERKA"
     gene            2138..2773
                     /locus_tag="VHN20_03125"
     CDS             2138..2773
                     /locus_tag="VHN20_03125"
                     /EC_number="2.5.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HEX2724794.1"
                     /translation="MFTGIVTDVGRIAAVSGSDRLRRIRIDCAYEPAGIALGASIACS
                     GPCLTVVAVGARDGGAWFEVDAAAETLARTTVGDWQAGMRVNLERALRIGDELGGHLV
                     TGHIDGPAEIVAREAVTGGEGPWAATARFVLRVPDGLARFIAEKGSVALDGTSLTVND
                     VDGDRFSVLIIPHTLAATTWGERRVGDRLNLEVDLMARYAARLAEARAAGY"
     gene            2825..3316
                     /gene="ribH"
                     /locus_tag="VHN20_03130"
     CDS             2825..3316
                     /gene="ribH"
                     /locus_tag="VHN20_03130"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013502476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009349 - riboflavin synthase complex
                     [Evidence IEA];
                     GO_function: GO:0000906 - 6,7-dimethyl-8-ribityllumazine
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HEX2724795.1"
                     /translation="MVTSTSPRTGDAPVAGARVLIVEARFYDDIADELLRGARGALEA
                     ARAQVDVLTVPGALEIPAALAIALDAAAAAGRPYDAAVALGCVIRGETAHFDIVAGES
                     ARALMDLAVERRLPLGNGIITVENEAQAWTRVRIGELNKGGGAADAALAVLRIKRRVE
                     QEA"
     gene            3318..3812
                     /gene="nusB"
                     /locus_tag="VHN20_03135"
     CDS             3318..3812
                     /gene="nusB"
                     /locus_tag="VHN20_03135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HEX2724796.1"
                     /translation="MAKPAERSAARLAAVQALYQMDVAGKGVVDAQAEFEAFWIGREV
                     EGISFKPAENAFFRDLLAGVVREQRAIDGKVDAALSEGWPLKRIEAVLRAILRAGAYE
                     LLFRKDVPGRVAISEYVDIAHSFYAEDEPGLVNAVLDRIAHDARPDEMKDRPVHSLSP
                     RGRG"
     gene            3942..4937
                     /gene="thiL"
                     /locus_tag="VHN20_03140"
     CDS             3942..4937
                     /gene="thiL"
                     /locus_tag="VHN20_03140"
                     /EC_number="2.7.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009030 - thiamine-phosphate kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine-phosphate kinase"
                     /protein_id="HEX2724797.1"
                     /translation="MTRASPLSEDELIARFFAPLAGEGGLALKDDAALLRPREGHELV
                     LTVDGVVAGVHFLPGDPAAAIAHKALAVNMSDLAAKGAEPAGFLLTLALPDDWTEPWL
                     EAFRDGLGDASRAFACPLLGGDTVRSAGPFWISITALGHVPSGGMVRRTSARPGHRIC
                     VTGTIGDAALGLAVHRGSADAAILALPGPDKSYLIERYLYPRPRLAVAETLRRHAAAA
                     MDISDGLAGDLAKMMRASGASAEVETACIPLSPAAGAAVAKNPALIDLLVTGGDDYEI
                     LCAVPEDRLAGFLAETAALGAPATVIGTVTAGDGLPVFRSPHGERRYERGAYQHF"
     gene            5160..7301
                     /locus_tag="VHN20_03145"
     CDS             5160..7301
                     /locus_tag="VHN20_03145"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003600980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009678 - diphosphate hydrolysis-driven
                     proton transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-translocating pyrophosphatase"
                     /protein_id="HEX2724798.1"
                     /translation="MTALLLIILGGLLSLAYGAWAYNDVMKRDAGTQRMQEIAGAIAE
                     GARAYLRRQYMTIGAVGVVLFVLLSFFLGIWVGLGFAIGAVLSGAAGFIGMNVSVRSN
                     VRTAQAATVSLGGGLDVAFKAGAVTGLLVAGLALLGVTGYYAFLTRGLDFAPSSRTVI
                     DALVALGFGASLISIFARLGGGIFTKGADVGGDLVGKVEAGIPEDDPRNPATIADNVG
                     DNVGDCAGMAADLFETYAVTVVATMVLAAIFFAGQGAVLERMMIYPLAIGAVCIGTSI
                     IGTFFVKLGQNQSIMGALYKGFIATGALSIVAIAIVNWLMFGGFGATFKTATGASFSS
                     LDLFLCALVGLGVTAAIVVITEYYTGTNFRPVQSIAKASVTGHGTNVIQGLAVSLEAT
                     ALPAIVIVAGIILSYSLAGLFGIAIAVTAMLAVAGVVVALDAFGPVTDNAGGIAEMAG
                     LPKEVRKSTDALDAVGNTTKAVTKGYAIGSAGLGALVLFAAYTSDLNYFIAEANRAGS
                     TTFQYFRGVQVDFSLANPYVVVGLLLGGLIPYLFAAMGMTAVGRAAGAVVEEVRRQFR
                     EKPGIMQGTDRPDYSRAVDMLTRAAIKEMVIPSLLPVLSPIVLYFVIYWIAGKNQAFA
                     SVGAMLLGVILTGLYVAISMTSGGGAWDNAKKYIEDGHYGGKGSEAHKSAVTGDTVGD
                     PYKDTAGPAVNPAIKITNIIALLLLAILAHS"
     gene            complement(7562..8017)
                     /locus_tag="VHN20_03150"
     CDS             complement(7562..8017)
                     /locus_tag="VHN20_03150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018042321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
                     /protein_id="HEX2724799.1"
                     /translation="MSRPSRKIIERLAAAALIGMSVAACSAIGEEFQRGYLLDERAVM
                     QVKPGMNADQVLQTLGSPSTVSTVGNKSWYYISQISRRPVHFMSERVVDQRVTAVYFD
                     KNFKGEKIALYGVQDGKLFDFVSRTTPSSGSERSFVSQLFQGLGNFNPL"
     gene            8127..8666
                     /locus_tag="VHN20_03155"
     CDS             8127..8666
                     /locus_tag="VHN20_03155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012453919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol-cytochrome C chaperone family protein"
                     /protein_id="HEX2724800.1"
                     /translation="MVLGFFRKDPRRGIIETLYQRVAAASRHPALYERLGIPDTVEGR
                     FESVALHLILVLRRLRTLPNPADEVAQDLVDAFFRHLDHSLRELAVGDLAVPKRMKKL
                     AEAFNGRSLAYDAALQQADDDGLGQALARNVIGAGRPAEALAAYVRASEARLAELDLA
                     ALLDEGPRFAAPAARESAP"
     gene            8663..9160
                     /locus_tag="VHN20_03160"
     CDS             8663..9160
                     /locus_tag="VHN20_03160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF177 domain-containing protein"
                     /protein_id="HEX2724801.1"
                     /translation="MTSASPAPLSRWVTVHDLPADGLDVSVEATAEERQALARDFGLP
                     AVHSLSGSFHLSGSQRRVEVTGAIEAEIDQVCVVTLEPFTTRLREEVEADYAAPGTPA
                     PQGEDAADEIVGGRIDLGALTAEFLALGLDPYPRKPGVDFDYQAPEGEPDTPFAALGK
                     LHGDK"
     gene            9255..10289
                     /gene="plsX"
                     /locus_tag="VHN20_03165"
     CDS             9255..10289
                     /gene="plsX"
                     /locus_tag="VHN20_03165"
                     /EC_number="2.3.1.274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015933379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043811 - phosphate:acyl-[acyl carrier
                     protein] acyltransferase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HEX2724802.1"
                     /translation="MPQPVRISLDAMGGDHGPSVVVPGAALALERHPNLRFLMYGNER
                     MIAPLVEREPKLKSAVEIRHTDVAVSMDDKPSQAVRAGRWKSSMWLAIQAVRDGEADA
                     AVSAGNTGALMAMSKICLKTMAHIERPAIAAIWPTLRGESIVLDVGASIGADAVHLLD
                     MAIMGAAMAHIVFDLERPTVGLLNVGVEEIKGIEIVKEAGRMLREADLPHLAYHGFVE
                     GDDIGKGTVDVVVTEGFTGNIALKTAEGTAKQIGEYLKSAMSRTLTAKVGYLFAKRAF
                     DALRDKMDPRKVNGGVFLGLDGVVIKSHGGTDALGFASAIDIAYDMAHYELMRTIREM
                     LEQTPAAASA"
BASE COUNT         1510 a         3636 c         3589 g         1655 t
ORIGIN      
        1 atcgccgcca aggcggtcgc cttcggcgag gccctgcgtc ccgagttcaa gctttatgcc
       61 cgcgccgtca ccgagaacgc caaggtgctc gcggcgacgc tgaccgccgg cggctacgat
      121 ctcgtctcgg gcggcaccga caaccatctg atgctgctcg atttgcgctc caagaagctc
      181 accgggaagg ctgccgaggc ggcgttgtcg cgcgcccaca tcacctgcaa caagaacggc
      241 gtgccgttcg atccggagaa gccgatgatc acgtcgggga tccgcgtcgg cagcccggcc
      301 tgcacgtcgc gcggcttcgg ggttgcggag ttcaagcgcg tcggcgagct gatcatcgag
      361 gtgctggacg ggctcgcccg caatggcgaa gacggcaacg cttcggtcga ggccggcgcc
      421 aaggatcgcg cccaggatct cacgcggcgg ttcccgatct acgggtaacg cggcgaaccc
      481 acagagggtc ggatgcgctg tccctattgc ggaagcctcg agacgcaggt caaggattcg
      541 cgtccgaccg acgacgccgc cgccatccgg cgccggcgca tctgcccgga ttgcggcggc
      601 cgcttcacca ccttcgagcg cgtgcagctg cgcgagctga ccatcgtcaa gcgctccggg
      661 cggcgcgtgc cgttcgaccg cgacaagctg cagcgctcga tcgaggtcgc gctgcgcaag
      721 cgccccgtcg atccggagcg cgtcgaacgc atgatcaacg gcatcgttcg ccagctcgaa
      781 agccgcggcg acagcgacgt gccgagcgag gccgtcggcg agctcgtcat ggaaggcctc
      841 aaggggctcg acgacgtcgc ctatgtgcgc ttcgcgtcgg tctacaagaa tttccgcgag
      901 gccaaggatt tcgaggagct gatcggcgaa ctgaccagcg aggagccgac ggacggtccg
      961 ccgccgcggc ggccggcacg gtccggcgcg tgaccctcgt ccgttcttcc atggcggtcg
     1021 ccgatcccgc gtccgacccg ctcgacgagc gcttcatgcg catggcgatc gcgctcggcg
     1081 agcgccatct cgggcgcacc tggccgaacc cgtcggtcgg ggccgtcgtc gtggccggcg
     1141 ggacggagcc gcgcatcgtc gcgcaaggca tcaccggcgc gggcgggcgg ccgcatgccg
     1201 agcgcatcgc gctcgatgcc gccggagccg cggcgcgcgg cgcgaccctt tatgtctcgc
     1261 tcgagccctg cgcgcatcac ggcaagacgc cgccctgcgt cgacgccatc atggcagccg
     1321 gaattgcgcg cgtggtgacg tcgctcgagg atcccgacgc gcgggtgcgc ggtcgcgggc
     1381 atgcggtgct gcatgatgcc ggaatcgcgc tgacgacggg cgtgctggcc ggcgaggccg
     1441 ggcgcgccca tcgcggccac atctggcgcg tcgtgcacgg gcggccgttc gtgagcctga
     1501 agctggcgcg cacggccgac ggctacgcgg cgcgcatcgc cgggccgcgc ctgatgatct
     1561 ccggcgagac cgccatcgcc cgcgtgcaca tgctgcgcgc ccatgccgac gccatcctgg
     1621 tcggcgtcgg caccatcctg gccgacgacc cgctgctgac ggtgcgcctg ccggggctgg
     1681 aagaccgctc gccggtgcgg gtggtcttcg acagccgcct gcgcacgccg tccggcgcca
     1741 acgtcgtcgt cggggccaga caggtgccga cctggatcgt gacgacgccc ggcgcgcccg
     1801 ccgaggcgga gcgggcgctg ctcgcggggg gcgtcgagat cctgcgcgtc gccgcggatg
     1861 cggcgggcca gctcgacccg cgcgcggccc ttgccgcgct tgcggaacgc ggcatcacgc
     1921 gcatcttcac ggaaggcggg ccgtccctgg ccgagtgttt tgcgcgcgcc gatctgctcg
     1981 acgaggtgat gatctcgacc agccccaacg ccctcggcga gcccggccgc ccggccgtcg
     2041 gccgcgatct gcaggctcac atcgacgcgc atttccataa cgtctggtcc gagatggtcg
     2101 gttccgatcg tctcgacgcc tttgagagga aggcctgatg ttcacgggca tcgtcaccga
     2161 cgtcggccgt atcgcggccg tgtccggcag cgacaggctg cgccgcatcc gcatcgactg
     2221 cgcctacgag ccggccggca tcgcgctcgg cgcgtcgatc gcctgctcgg ggccgtgcct
     2281 gaccgtggtg gccgtgggcg cgcgcgacgg cggcgcctgg ttcgaggtcg acgccgccgc
     2341 cgagacgctg gcgcgcacga cggtcggcga ctggcaggcc gggatgcgcg tcaatctcga
     2401 gcgcgcgctc aggatcggcg acgagctcgg cggccacctc gtcaccggcc atatcgacgg
     2461 ccccgccgag atcgtcgccc gcgaggccgt gacgggcggg gaggggccgt gggcggcgac
     2521 ggcgaggttc gtcctgcgcg tcccggacgg cctggcgcgc ttcatcgccg aaaagggatc
     2581 ggttgcgctc gacggcacct cgctgaccgt caacgacgtc gacggcgacc gcttctcggt
     2641 gctgatcatc ccgcatacgc tggccgccac cacctggggc gagcgccgcg tcggcgatcg
     2701 cctcaacctc gaggtcgacc tgatggcccg ctacgcggcg cgccttgccg aggctcgtgc
     2761 ggcggggtac tgacgctgcc cgtccatctt cccttccggg acggacagtt gccgcagagc
     2821 gatcatggtc acatcaactt cgccacggac cggggacgcg ccggtcgccg gcgcccgcgt
     2881 gctcatcgtc gaggcgcgct tttacgacga catcgccgat gagctcctgc gcggtgcgcg
     2941 cggcgcgctc gaagcggccc gggcgcaggt cgacgtgctc accgtgccgg gcgccctcga
     3001 gatcccggcg gcgcttgcga tcgcgctcga tgcggcggcg gcggcgggcc ggccttacga
     3061 cgcggcggtg gcgctcggct gcgtcatccg cggcgagacg gcgcatttcg acatcgtcgc
     3121 gggcgagagc gcgcgcgccc tgatggacct tgcggtggag cgcaggctgc cgctcggcaa
     3181 cggcatcatc acggtcgaaa acgaggccca ggcatggacc cgggtcagga tcggtgaatt
     3241 gaataaggga ggcggcgcgg cggacgccgc gctggcggtg ctgcgcatca agcgccgcgt
     3301 ggaacaggag gcctgatatg gcgaagcccg ccgagcgcag cgccgcgcgg ctcgccgccg
     3361 tgcaggcgct ttaccagatg gatgtcgccg gcaagggcgt cgtcgacgcg caggccgagt
     3421 tcgaggcatt ctggatcggc cgcgaggtcg aaggcatcag cttcaagccg gccgagaacg
     3481 cgttcttccg cgacctcctg gccggggtgg tgcgcgagca gcgcgccatc gacggcaagg
     3541 tcgacgccgc cctgtcggag ggctggccgc tcaagcgcat cgaggccgtg ctgcgcgcca
     3601 tcctgcgcgc cggggcttac gaactgctgt tccgcaagga cgtgccgggc cgcgtcgcga
     3661 tctccgaata cgtcgacatc gcccacagct tttacgccga ggacgagccg ggcctcgtca
     3721 acgcggtcct cgacaggatc gcccacgacg cgcgtcccga cgaaatgaag gaccgcccgg
     3781 tccattccct gtcgccaagg ggacgagggt aggggcgcgg gcgtgcccgc ttcgagacga
     3841 ggcgtttgtc tcacgcaact cgcgtcgccg agccgacctc gcccgtccgg gcgcggtgac
     3901 ggacggctcg acaggacggc ccgggcgcga caggttgcgg catgacccgc gcctcccctc
     3961 tctccgaaga cgagctgatc gcccgctttt tcgcgcccct ggccggggag ggtggtctcg
     4021 ccctgaagga cgacgccgcc ttgctgcggc cgcgcgaggg gcacgagctc gtgctcacgg
     4081 tcgacggtgt cgtcgccggc gtccatttcc tgcccggcga cccggcggcg gcaatcgccc
     4141 acaaggcgct ggcggtcaac atgtccgatc tcgccgccaa gggcgctgag ccggcgggct
     4201 ttcttctgac cctcgccctt cccgacgact ggaccgagcc gtggctcgag gcttttcgcg
     4261 atggcctcgg cgacgcgtcc cgggcgttcg cgtgccccct gctcggtggg gacacggtgc
     4321 gcagcgccgg tccgttctgg atctcgatca ccgccctcgg ccacgtccct tcgggcggca
     4381 tggtgcggcg cacctcggcc cgcccgggcc accggatctg cgtcacgggc acgatcggcg
     4441 acgcggcgct cggcctcgcc gtgcatcgcg gctccgccga tgccgcgatc ctggccctgc
     4501 cgggcccgga caaaagctac ctgatcgagc gttatctcta cccgcgtccg cgcctcgccg
     4561 tggcggagac gctgcgccgg cacgccgcgg cggcgatgga catttccgat ggccttgccg
     4621 gcgatctcgc caagatgatg cgggcgagcg gcgcctcggc ggaggtcgag acggcgtgca
     4681 tcccgctctc gccggcggcc ggcgccgcgg tcgcaaagaa ccccgcgctc atcgacctgc
     4741 tcgtcacggg cggcgacgat tacgagatcc tctgcgcggt gcccgaggac cgcctcgccg
     4801 gctttctggc ggaaaccgcc gcgctggggg cgcccgccac ggtgatcggc accgtcacgg
     4861 caggggacgg cctgcctgtg ttccgctcgc cgcatggcga gcgccgctac gagcgcgggg
     4921 cctatcagca tttttaaccg gttccttgat ggggaaaggg gggccgcgcc gggcccacgg
     4981 cgctccatcg ggccggcggt aagcaaaaag ccgggaaatc cggctttcgg accgaagccg
     5041 cgttgcggtt tcggcgaaac tttggcagag agccccgcat ctccctcggt ctagggcggc
     5101 gagggcgcgt tcgacgcgca cccgtttcct tgccgcatca ccaacaacag gacggtacga
     5161 tgaccgctct ccttctgatc atcctcggcg gcttgctgtc gctcgcctac ggcgcgtggg
     5221 cctataacga cgtgatgaag cgcgacgccg gcacgcagcg catgcaggag atcgccggtg
     5281 ccatcgccga gggcgcgcgg gcctatctgc gccgccagta tatgaccatc ggggccgtcg
     5341 gggtcgtgct gttcgtcctg ctctcgttct tcctcggcat ctgggtcggc ctgggctttg
     5401 ccatcggcgc ggtgctctcg ggagccgccg gcttcatcgg catgaacgtt tcggtccgct
     5461 ccaacgtgcg caccgcgcag gccgcgacgg tgtcgctcgg tggtggcctc gacgtggcgt
     5521 tcaaggccgg cgccgtgacc ggcctcctgg tcgccggcct cgccctgctg ggcgtcaccg
     5581 gctactacgc gttcctgacc cgcggccttg attttgcgcc ctccagccgc accgtcatcg
     5641 acgccctggt ggccctcggc ttcggcgcct cgctgatctc gatcttcgcg cgcctcggcg
     5701 gcggcatctt caccaagggc gccgacgtcg gcggcgacct cgtcggcaag gtcgaggccg
     5761 gcattcctga agacgatccg cgcaacccgg cgaccatcgc cgacaacgtc ggcgacaacg
     5821 tcggcgactg cgccggcatg gccgccgacc tgttcgagac ctacgccgtc accgtcgtcg
     5881 ccaccatggt gctggcagcg atcttcttcg ccggccaggg ggcggtcctc gagcggatga
     5941 tgatctatcc gctcgccatc ggcgccgtgt gcatcggcac ctcgatcatc ggcaccttct
     6001 tcgtcaagct cggccagaac cagtcgatca tgggcgcgct ctacaagggc ttcatcgcca
     6061 ccggcgcgct ttcgatcgtc gccatcgcca tcgtcaactg gctcatgttc ggcggcttcg
     6121 gcgcgacctt caagaccgcc accggcgcga gcttctcctc gctcgacctg ttcctgtgcg
     6181 ccctggtcgg gctcggcgtg acggccgcga tcgtcgtgat caccgaatac tacacgggca
     6241 cgaatttccg ccccgttcag tcgatcgcca aggcgtcggt cacgggtcac ggcaccaacg
     6301 tgatccaggg cctcgccgtc tcgctcgagg cgacggcgct gcccgccatc gtcatcgtcg
     6361 ccggcatcat cctgagctac agcctggccg gtctgttcgg catcgccatc gcggtcaccg
     6421 ccatgctggc ggtcgcgggc gtggtcgtgg cgctcgacgc cttcggcccg gtcaccgaca
     6481 atgccggcgg catcgccgag atggcgggcc tgcccaagga agtgcgcaag tcgaccgacg
     6541 ccctcgatgc ggtcggcaac acgaccaagg cggtcaccaa gggctacgcc atcggctcgg
     6601 ccggtctcgg cgcgctcgtg ctgttcgcgg cctacacctc ggacctcaac tacttcatcg
     6661 ccgaggccaa tcgggccggc tcgacgacct tccagtattt ccgtggcgtc caggtcgact
     6721 tctcgctcgc caacccctac gtcgtcgtcg gcctgctgct cggcgggctg atcccgtacc
     6781 tgttcgccgc gatgggcatg acggcggtgg gacgtgctgc cggcgccgtc gtcgaggagg
     6841 tccgccgcca gttccgcgag aagcccggca tcatgcaggg caccgaccgg cccgactaca
     6901 gccgcgccgt cgacatgctg acccgcgccg ccatcaagga gatggtgatc ccgtccttgc
     6961 tgccggtgct ttcgccgatc gtgctctact tcgtgatcta ctggatcgcc ggcaagaacc
     7021 aggcgttcgc gtcggtcggc gccatgctgc tcggcgtgat cctgacgggg ctctacgtcg
     7081 cgatctccat gacctcgggc ggcggcgcct gggacaatgc caagaaatac atcgaggacg
     7141 gccattacgg cggcaagggc tccgaggccc acaagtccgc cgtcaccggc gacaccgtcg
     7201 gcgaccccta caaggacacc gccggcccgg ccgtgaaccc ggccatcaag atcaccaaca
     7261 tcatcgccct gctgctgctc gccatcctgg cgcacagctg agcggtcgct ctcctcaaaa
     7321 ctgaaaaccc ccgcggtgac gccgcggggg ttttttgttg ttcgcatcat gagcgcggcc
     7381 gcgctcagcg tccgcacggc gaagccggat tcctggacga ggatggacga gggtgacggg
     7441 gcaacgccgc ggccggtcgg cgaagcggtg cccggagccg gacttgaggc gcgccgcgcc
     7501 gtatcggatt gccggacaag ccgcccggaa acgaaccctt ccggtcgccg tgggcgcggt
     7561 tctagagcgg gttgaagttg cccaggccct ggaagagctg cgagacgaag ctgcgttcgg
     7621 agccgctgct cggcgtcgtg cggctcacga agtcgaagag cttgccgtcc tgcacgccgt
     7681 agagcgcgat cttctcgccc ttgaagttct tgtcgaaata gaccgcggtg acgcgctggt
     7741 cgacgacgcg ctcgctcatg aaatggaccg gccgtcgcga gatctggctg atatagtacc
     7801 agctcttgtt gccgaccgtc gaaacggtcg agggcgagcc gagcgtctgc aggacctggt
     7861 cggcgttcat gcccggcttg acctgcatga ccgcgcgctc gtcgagcagg tagccgcgct
     7921 ggaactcctc gccgatggcc gagcaggccg cgacggacat cccgatcagg gcagcggccg
     7981 ccaggcgctc gatgattttc cgagaggggc gcgacatacg gtccttccat ggcgggcacg
     8041 gcgcgtgacg agttgcgccg gacggttggc atgccgtacc ccggccctgt gactttgaca
     8101 aggcggggcc aggccccgtg atccgaatgg tcctaggctt tttccgaaaa gatccgcgcc
     8161 gtggcattat cgaaacgctt tatcagcggg tcgcggcggc ttcgcgccac ccggcccttt
     8221 atgagcggct cggcatccct gacacggtcg agggccggtt cgaatcggtc gctctgcacc
     8281 tgattcttgt cctccgccgc ctgcggacac tgccaaatcc ggccgacgag gtggcccagg
     8341 acctcgtcga cgcgtttttc cgccacctcg accactcgct gcgcgagctc gcagtgggcg
     8401 atctggccgt gcccaagcgc atgaagaagc tggccgaggc cttcaacggc cggtcgctcg
     8461 cgtatgatgc tgcattgcaa caggcggacg atgatgggct cggacaggcg ctcgcgcgca
     8521 acgtgatcgg cgccggtcgc ccggccgagg cgctcgccgc ctacgtgcgg gcctcggaag
     8581 cgagactggc cgaactcgat cttgccgcgt tgttggatga ggggccgcgc ttcgcggcgc
     8641 ccgcagcaag ggagagcgcg ccatgacgtc agcatcgccg gccccgttgt cgcgctgggt
     8701 cacggtccac gatctgccgg cagacgggct cgacgtgagc gtcgaggcga ccgccgagga
     8761 gcgccaggcc cttgccaggg actttggtct tcccgccgtg cattcgctga gcgggtcgtt
     8821 tcacttgtcg ggctcgcagc gccgggtcga ggtcacgggt gccatcgaag ccgagatcga
     8881 ccaggtctgc gtcgtcacgc tcgagccgtt cacgacgcgg ctgcgcgagg aggtcgaggc
     8941 cgattatgcg gcgcccggca cgccggcgcc gcagggtgag gatgcggccg acgagatcgt
     9001 cggcgggcgc atcgatctcg gcgccctgac ggcggaattt ctcgcgctcg gcctcgatcc
     9061 ctatccgcgc aagcccggcg tcgatttcga ttatcaggcg cccgaggggg agccggacac
     9121 gccgttcgcc gcgctcggca agctgcacgg ggacaaatag ctgtcgtgtc gaggaaatcg
     9181 attgcggtgc gcgagcgaac cgctattttc gcgcacccgc tgcaagcccc tcgtcggaaa
     9241 gcgtcctcat tctaatgcct cagcccgtgc gcatctccct cgacgcgatg ggtggcgacc
     9301 atggcccgtc ggtggtcgtg cccggtgccg cgctcgcgct cgagcggcac ccgaacctgc
     9361 gcttcctgat gtacggcaac gagcgcatga tcgcgccgct ggtcgagcgt gagccgaagc
     9421 tcaagagcgc ggtcgagatt cgtcacaccg atgtcgccgt gagcatggac gacaagccga
     9481 gccaggcagt gcgggcgggg cgctggaagt cgtccatgtg gctggcgatc caggcggtgc
     9541 gcgacggcga ggccgatgcg gcggtgtcgg ccggcaacac cggcgcgctg atggccatgt
     9601 ccaagatctg cctcaagacc atggcgcata tcgagcgccc ggcgatcgcc gccatctggc
     9661 cgaccttgcg cggcgagagc atcgtgctcg acgtcggcgc cagcatcggc gcggacgccg
     9721 tccatctcct cgacatggcg atcatgggcg ccgccatggc gcacatcgtc ttcgacctgg
     9781 agcggccgac cgtcggtctc ctcaatgtcg gggtcgagga gatcaagggc atcgagatcg
     9841 tcaaggaggc cgggcgcatg ctgcgcgaag ccgacctgcc gcatctcgcc tatcacggct
     9901 tcgtcgaggg cgacgacatc ggcaagggca cggtcgacgt ggtcgtgacc gaggggttca
     9961 cgggcaacat cgcactcaag accgccgagg gcaccgccaa gcagatcggc gagtatttga
    10021 agagcgctat gagccgcacg ctgacggcca aggtcggcta cctgttcgcc aagcgcgcct
    10081 tcgacgccct gcgcgacaag atggacccgc gcaaggtcaa cggcggcgtc tttctcgggc
    10141 tcgacggcgt ggtgatcaag agccatggcg gcaccgatgc cctcggcttc gccagcgcca
    10201 tcgacatcgc ttatgacatg gcccattacg agctgatgcg cacgattcgg gagatgctgg
    10261 agcagacccc ggcggctgca tccgcctaga gcgggaatcg tcagatgaat ctatgccgct
    10321 ccggatttct ttgtggtcgc atgatccccg gatcgagtcg gggacaagct ctgccggcga
    10381 agtggaatcc
//
LOCUS       DATAIQ010000183         3591 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_378468, whole genome shotgun sequence.
ACCESSION   DATAIQ010000183 DATAIQ010000000
VERSION     DATAIQ010000183.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3591)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3591)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3591
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_378468"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            33..779
                     /gene="aztA"
                     /locus_tag="VHN20_03170"
     CDS             33..779
                     /gene="aztA"
                     /locus_tag="VHN20_03170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter ATP-binding protein AztA"
                     /protein_id="HEX2724803.1"
                     /translation="MSASAIRFDNVTLGYGRHPAVHHLRGEIPGGSLTAIVGPNGAGK
                     STLLKGIAGALPPLDGRIEVSGTPRPRIAYLPQSAEIDRSFPLSIYDLVAMGLWDRTG
                     LFGGVGAGERTRIGDALAAVGLTGFERRPIGTLSGGQMQRALFARLLLQDASVILLDE
                     PFTAIDARTTADLLDVVGRWHHEGRTVVAVLHDLEVVRKVFPKTLLIARTPVAWGDTG
                     DVLNPANLLQARRMIEAFDAHANVCEQEVA"
     gene            917..1786
                     /gene="aztB"
                     /locus_tag="VHN20_03175"
     CDS             917..1786
                     /gene="aztB"
                     /locus_tag="VHN20_03175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter permease AztB"
                     /protein_id="HEX2724804.1"
                     /translation="MLYDALIAPFTEFEFMRRALVGAVAIALGAGPMGVFLMLRRMSL
                     TGDAMAHAILPGAAVGFLMAGLSLPAMTVGGIIAGVIVAMLAGLVTRATPLKEDASLA
                     AFYLLSLALGVTIVSLRGSNVDLLHVLFGTVLALDDAALLLLAAIATVTLVTLSVLYR
                     PLVLECVDPSFLRSVSRAGTPTHLVFLGLVVLNLVGGFQALGTLLAVGLMMLPAAAAR
                     FWSADITVMMLIATGIGIASALFGLLLSFHAELPAGPAIIMVAGGVYLVSLAVGREGG
                     LLWLAWPGRHLEA"
     gene            1803..2726
                     /locus_tag="VHN20_03180"
     CDS             1803..2726
                     /locus_tag="VHN20_03180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018387494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding protein"
                     /protein_id="HEX2724805.1"
                     /translation="MLTRRHALTWLTCGFALCTASIAPLSARAAESIKVVATFSILGD
                     LVKNVGGDRVEITTLVGPNGDAHVFSPTPSDARRIADARLVVFNGLRFDGWITRLIKS
                     SGTRAAVVEAAKGVETLAGKPGQGRAHGHAGLDPHAWQDIANTRIYVTNIRDGLAAAD
                     PAGKAAYEANAAAYLARLDALEAEVKAAIASLPAERRRIITSHDAFGYFARAYGLAFV
                     APQGVSTDAEASAKDVARIIQQIRREKIGAVFLENIADARLIERIARETGARIGDRLY
                     SDALSGPDGPAATYIDMMRHNIRAFTAALSS"
     gene            2859..>3591
                     /locus_tag="VHN20_03185"
     CDS             2859..>3591
                     /locus_tag="VHN20_03185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018259748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HEX2724806.1"
                     /translation="MSEKIPVTVLTGYLGAGKTTLLNRILTEQHGKRYAVIVNEFGEI
                     GIDNELVVGADEEVFEMNNSCVCCTVRGDLIRIMDGLMKRKGKFDAIIVETTGLADPA
                     PVAQTFFVDQDVSDAAKLDAVVTVADAKWLSDRLKDAPEAKNQIAFADVILLNKTDLV
                     SAAELNEVEARIRAINPYAKVHRTQKCAVPLNEVLGRNAFDLDRIIELEPDFLEEGHH
                     HHHDEDVQSVAVRVDGEMNPDIFMPW"
BASE COUNT          556 a         1259 c         1143 g          633 t
ORIGIN      
        1 cggcgcttgg ctgaagggag ttggacagtg tcatgagcgc gagcgcgatc cgcttcgaca
       61 atgtcaccct cggctacggc cggcatccgg ccgtgcatca tctgcgcggc gagatccccg
      121 gaggcagcct gacagcgatc gtcggcccca acggcgccgg caagtcgacg ctcctgaagg
      181 gcatcgccgg cgccctgccg ccgctcgacg gccgcatcga ggtgtcaggc accccgcggc
      241 cgcgcatcgc ctatctgccg cagagcgccg agatcgaccg ctcctttccg ctgtcgatct
      301 acgatctcgt cgccatgggc ctgtgggacc gcaccggcct gttcggcggc gtcggcgccg
      361 gtgagcggac gcgcatcggc gatgcgctgg ccgcggtcgg cctgaccggg ttcgaacgcc
      421 gccccatcgg gaccctgtcc ggcggccaga tgcagcgcgc cctgttcgcg cggctgctgc
      481 tgcaggacgc gtcggtgatc ctgctcgacg aacccttcac ggcgatcgac gccaggacca
      541 ccgccgatct cctcgacgtg gtcggccgtt ggcaccacga ggggcgcacg gtggtcgcgg
      601 tcctgcacga tctcgaggtg gtgaggaaag tctttcccaa gacgcttctg atcgcgcgca
      661 cgcccgtcgc ctggggcgac accggcgacg tcctcaaccc cgccaacctg cttcaggcac
      721 gccgcatgat cgaggctttc gatgcgcacg ccaatgtctg cgagcaggag gttgcctaaa
      781 gctctccagc aaagcgcggc agactggctg agcgccgcgc gactcttccc tcaccccatc
      841 tctcccgcaa gcgggaaagg aagccccgat ctcgccttgc ccttaactgg gccgctcccc
      901 tccggaatga ccattgatgc tctatgacgc tttgatcgcc cctttcaccg aattcgagtt
      961 catgcgccgg gcccttgtcg gcgccgttgc gatcgcgctc ggcgccggcc cgatgggcgt
     1021 cttcctcatg ctgcggcgca tgagcctgac cggcgacgcc atggcccatg ccatcctgcc
     1081 tggggccgcg gtgggctttc tcatggctgg gctgtcgctg ccggcgatga ccgtcggcgg
     1141 aataatcgcc ggcgtgatcg tcgcgatgct cgccggcctc gtgacgcgcg caacgccgct
     1201 caaggaggat gcgtcgctgg cggccttcta tctgctgtcg ctcgccctcg gcgttaccat
     1261 cgtgtcgctg cgcggatcga atgtcgacct cctgcacgtg ctgttcggga ccgtcctggc
     1321 gctcgacgac gccgcgcttc tgctgctcgc cgccatcgcc acggtcacgc tggtgacgct
     1381 gtcggtgctt taccggccgc tggtgctcga atgcgtcgac ccgagcttcc tgcgctccgt
     1441 cagtcgcgcc ggcaccccga cgcacctcgt ttttctcggc ctcgtcgttc tgaacctcgt
     1501 cggcgggttc caggccctcg gcacgctgct ggcggtgggg ctgatgatgc tgccggccgc
     1561 cgctgcccgt ttctggagcg ccgacatcac cgtgatgatg ctgatcgcca cggggatcgg
     1621 catcgcctcg gccctgttcg gcctgctgct ctcgttccac gccgagctgc cggccggccc
     1681 ggccatcatc atggttgcgg gcggcgtcta tctcgtctcg ctggccgtcg gccgcgaagg
     1741 cgggctcctg tggctggcct ggccgggccg ccatcttgaa gcttgatcgg aaggacctgc
     1801 ttatgctgac gagacggcac gccctgacgt ggctgacctg cggctttgcg ctttgcaccg
     1861 cgtccatcgc gccgctttcc gcccgagcgg ctgagtcgat caaggtggtg gcgacgttct
     1921 cgatcctggg cgatttggtg aagaatgtcg gcggcgaccg ggtcgagatc acgacgctcg
     1981 ttggtccgaa tggcgacgcg catgtctttt cgccgacgcc ttccgatgcc cgccgcatcg
     2041 ccgatgccag gctcgtggtc ttcaacggcc tgcgtttcga cggctggatc acgcgcctga
     2101 tcaagtcttc cggaacccgg gccgccgtcg ttgaggccgc gaaaggcgtt gaaacgcttg
     2161 cgggcaagcc cgggcaaggc cgcgcgcatg gccacgccgg gctcgatccg catgcctggc
     2221 aggacatcgc caacaccagg atctacgtca ccaatatccg cgacggtctc gctgccgcgg
     2281 acccggccgg caaggcggcc tacgaggcga acgccgccgc ttatctggcg cgtctcgacg
     2341 cgctagaggc ggaggtgaag gccgccatag ccagccttcc ggccgagcgg cggcgcatca
     2401 tcacctcgca cgacgcgttc ggctatttcg cgcgggctta cggcctcgcc ttcgtcgccc
     2461 cccagggcgt ctcgaccgac gccgaggcgt cggcgaagga cgtcgcccgc atcatccagc
     2521 agatcaggcg cgagaagatc ggggcggtat tcctggagaa catcgcggat gcgcgcctga
     2581 tcgagcgcat tgccagggag acgggggccc gcatcggcga ccggctctat tccgacgccc
     2641 tgtcgggccc ggatggcccg gccgccactt acatcgacat gatgcgacac aatataaggg
     2701 ccttcacggc tgcactgtcc tcctaggaac gaattgcgag tggcaaatag cgaatagaat
     2761 gaggtgccag ggccgtaccg gaccctggat gagccgtctg cccgccgacc tcgtccctca
     2821 ccgcctgcca tgcgctagtc gccagtttgg agttgttgat gtcagaaaaa attcctgtca
     2881 cggtcctgac cggctatctc ggcgccggca agacgacgct cctcaaccgc atcctgaccg
     2941 agcagcacgg caagcgctat gcggtgatcg tcaacgagtt cggcgagatc ggcatcgaca
     3001 acgagctcgt ggtcggcgcc gacgaggagg tgttcgagat gaacaacagc tgtgtctgct
     3061 gcaccgtgcg cggcgacctg atccgcatca tggacggcct gatgaagcgc aagggcaagt
     3121 tcgacgcaat catcgtcgag accaccggcc tcgccgatcc ggcccccgtg gcgcagacct
     3181 tcttcgtcga tcaggacgtc tccgacgccg ccaagctcga cgcggtcgtg accgtggcgg
     3241 acgccaaatg gctgtcggac cgcctcaagg acgctcccga ggccaagaac cagatcgcct
     3301 tcgcggacgt catcctcctc aacaagaccg acctcgtcag cgcggccgaa ctgaacgagg
     3361 tcgaggcgcg catccgcgcc atcaatccct atgccaaggt gcaccgcacc cagaaatgcg
     3421 ccgtgcccct gaacgaggtg ctcggccgca acgccttcga cctcgaccgc atcatcgagc
     3481 tcgagccgga ctttctcgag gaaggtcacc atcaccacca tgacgaggac gtgcagtccg
     3541 tcgccgtgcg cgtcgacggc gagatgaatc ccgacatctt catgccgtgg a
//
LOCUS       DATAIQ010000184         3779 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_188888, whole genome shotgun sequence.
ACCESSION   DATAIQ010000184 DATAIQ010000000
VERSION     DATAIQ010000184.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3779)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3779)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3779
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_188888"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(55..624)
                     /locus_tag="VHN20_03190"
     CDS             complement(55..624)
                     /locus_tag="VHN20_03190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009339595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF488 domain-containing protein"
                     /protein_id="HEX2724807.1"
                     /translation="MSAAFYTIGHSTHPIDEFIGVLQSAQIQVVIDVRTVPRSRRNPH
                     FNRETLPQTLQEHQIGYEHMAELGGLRGKQRRVAPSPNTFWTNDSFRNYADYALGPDF
                     RAGLIKLRDLGHQRRCAIMCAEAVWWRCHRRIIADYLVSAGESVFHIMGADKIEPAEL
                     SPAAQLQGDGTLIYRAPPGDQFALALEQP"
     gene            complement(813..3101)
                     /locus_tag="VHN20_03195"
     CDS             complement(813..3101)
                     /locus_tag="VHN20_03195"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEX2724808.1"
                     /translation="MDKPSTFSRRSLLKAGGALVVSVGMPVGLDTVLAVNSAAAQGTR
                     PPLVPSELDSYIAINADGGVLAFFGKMDMGQGLFTAIGQIVAEELDVPFNRVKVIMGD
                     TGTTVNQGGASGSTGIQNGGKQMRAVAAEARRILVEMAAQKFGVAPESLIVVDGIVRL
                     RETSDDTTRSVSYADLIGGRYFNAQLEWNKQHGNALYAPGKATPKKPSEYKIVGKPLP
                     REDIAPKVYCQEDYVTDIKVPGMVHARMIRPPVAGATPTAVDESAVKDIPGIQVVRQN
                     GFLAVVAEKEWDAIKAAEKLKVEWSDAKPPFPTPAEIYDHIRKASVVKRQVETNNGDV
                     DAAFKNAARVIEAEYEWPFQSHAAMGPACAVVEIRGDSATVWTGSQKPHYVRDGVANM
                     LGMKAEQVRGIWVTGPGSYGRNDAGDCAADCAVIAKAVGKPVRLQYTREQGTGWDPKG
                     PASIHKARAAIDANGNVVAYEFLSKGFSRLDVNSNESHPKDVLAGHFLGAPLKHEPAF
                     NVPAESYEFANKRMAWETIPPLLDRASPLRTSHLRDPVGPQIHFASESFLDEVAAALG
                     IDPVELRLRHVKNPRDIAVIKAAAERAGWEKRPSPRTGQSGPKVNGRGIAYSQRNGTR
                     VAVVAEVDVDRETGKIAARKFTVAHDCGQIINPIGLRHTIEGNVVQGLSRTLWEEVQF
                     DNKSVTSVDWMTYPILDIMETPAEIDVVLIDRPDVAPSGAGEPSMRPLTAAIANAIFD
                     ATGVRIRRVPFTPDRVKAAFSA"
     gene            complement(3123..3590)
                     /locus_tag="VHN20_03200"
     CDS             complement(3123..3590)
                     /locus_tag="VHN20_03200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012452186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEX2724809.1"
                     /translation="MTERFSLNVNGKDHVVEADPDMPLLYALRNDIGLNNPKFGCGLA
                     QCGACTVHLDGKAIRSCVTPLSAVGTAKVVTLAGLGTPEKPHPLQVAYIEEQVPQCGY
                     CINGWIMTGAALLAENKKPTDGEIKEALTGLKCRCGTHYGIMRAVKRASEMMG"
BASE COUNT          575 a         1243 c         1256 g          705 t
ORIGIN      
        1 ccggacatgc tctaagagag aacagggtga aaagccagcc gcttgttgcg gccttcaagg
       61 ctgctcgagg gcgagggcga actggtcgcc gggaggggcg cggtagatga gcgttccgtc
      121 gccttgcagt tgcgcagccg gagagagctc ggcaggctcg atcttgtccg cccccatgat
      181 gtggaagacg ctttctccag cactgaccag gtagtcggcg atgatgcggc ggtggcagcg
      241 ccaccacacc gcctcggcgc acatgatggc gcagcgacgc tggtgtccga gatcgcgcaa
      301 cttgatgagg ccggcacgga aatccgggcc gagcgcgtag tccgcatagt tgcggaagct
      361 gtcgttggtc cagaacgtgt tcggcgacgg cgcaacgcga cgctgcttgc cgcgtaaccc
      421 acccagttcg gccatgtgtt cgtagccgat ctgatgctcc tgcaacgtct gcggcagcgt
      481 ctcgcggttg aaatgcgggt tcctgcgcga gcgcggcacg gtgcgcacgt cgatcacgac
      541 ctggatctgc gccgattgca acacaccgat gaactcgtcg atcgggtgcg tggaatggcc
      601 gatagtgtag aaggcggccg acatgactcc tcgcgcgcag gctgcgtcag gcgctgtttt
      661 cgacggcaaa cccgatcttc agcatgagtt gatcatgcct gatcttgtgc tttctcaatc
      721 gcgcgctccg tccggtttcg ctgaactttg ccgacaaacg aaagccggcg cgagcgccgg
      781 gtttcgcacg agggattcac gacaacacag cttcacgccg agaacgctgc cttgacgcgg
      841 tcgggggtga acggaacgcg ccggatgcgc acgcccgtgg cgtcgaagat ggcgttggcg
      901 atcgcggcgg tcagcggccg catcgacggc tcgccggcac cgctcggcgc gacgtcgggc
      961 cggtcgatca gcacgacgtc gatctccgct ggcgtctcca tgatgtcgag gatcggatag
     1021 gtcatccagt cgacgctggt cacggacttg ttgtcgaact ggacctcctc ccacaacgtg
     1081 cggctcaggc cctgcacgac gttgccctcg atcgtatgcc gcaggccgat cgggttgatg
     1141 atctgcccgc aatcatgcgc gacggtgaac ttgcgcgccg cgatcttgcc ggtctcgcga
     1201 tcgacgtcga cctcggccac gacggcgacg cgcgtgccgt tgcgttgcga gtaggcgatg
     1261 ccgcgtccgt tgaccttcgg cccgctctgg cccgtgcgcg gcgacggccg cttctcccag
     1321 ccagcacgct ccgccgcggc cttgatcacg gcgatgtcgc gcgggttctt gacgtggcgc
     1381 aagcgcagct cgaccgggtc gatgccgagc gccgccgcaa cctcgtcgag gaacgactcg
     1441 ctggcgaagt ggatctgcgg cccgaccggg tcgcgcaggt gcgacgtgcg cagcggagag
     1501 gcgcggtcga gcagcggcgg gatcgtctcc cacgccatgc gcttgttggc gaactcgtac
     1561 gactcggccg gcacgttgaa ggccggctcg tgcttgagcg gcgcgccgag aaaatgcccg
     1621 gcaagcacgt ccttgggatg gctctcattg ctgttcacgt cgagccgcga gaaacccttg
     1681 ctcaggaact cgtaggcgac gacattgcca ttggcgtcga tggcagcacg cgccttgtgg
     1741 atcgaagccg gccctttcgg gtcccacccg gtgccctgtt cgcgggtgta ttgcaggcgc
     1801 accggcttgc cgaccgcctt ggcgatgacc gcgcagtccg ccgcgcagtc gcctgcgtcg
     1861 ttgcgcccgt aggagcccgg gccggtcacc cagatgccgc gcacctgctc cgccttcatg
     1921 ccgagcatgt tggcgacgcc gtcgcgcaca taatgcggct tctgcgagcc ggtccacacc
     1981 gtggcgctgt cgcccctgat ctcgacgacg gcgcaagccg ggcccatggc ggcatgcgac
     2041 tggaagggcc actcgtattc ggcctcgatc acccgagccg cgttcttgaa tgccgcgtcg
     2101 acgtcgccgt tgttcgtctc gacctggcgc ttgacgacgc tcgccttgcg gatgtggtca
     2161 tagatctccg ccggcgtcgg gaagggcggc tttgcatccg accactcgac cttcagcttc
     2221 tcggcagcct tgatggcgtc ccattccttc tcggcgacga ccgccaaaaa accgttctgg
     2281 cgtacgacct gaatgccggg aatgtccttc accgcgcttt cgtcgacggc ggtcggcgtg
     2341 gcgccggcca ccggcgggcg gatcatgcgg gcatggacca tgcccggcac cttgatatcg
     2401 gtgacgtagt cctcctggca gtagactttc ggcgcgatgt cctcgcgcgg cagcggcttg
     2461 ccgacgatct tgtattcgct cggcttcttg ggcgtcgcct tgccgggcgc gtagagcgca
     2521 ttgccgtgct gcttgttcca ctcgagctgc gcgttgaagt agcgcccgcc gatcaggtcc
     2581 gcgtaggaca ccgagcgcgt cgtgtcgtcc gacgtctcgc gcaaccgcac gatgccgtcg
     2641 accacgatca ggctttcggg cgccacgccg aatttttggg ccgccatttc gacgaggata
     2701 cggcgcgcct cggccgccac ggcgcgcatc tgcttgccgc cgttctggat gcccgtcgag
     2761 cccgaggcgc cgccctggtt cacggtcgtc ccggtgtcgc ccatgatcac cttgacgcgg
     2821 ttgaatggca cgtcgagctc ttccgccacg atctggccga tggcggtgaa gagcccctgg
     2881 cccatgtcca tcttgccgaa gaaggcgagg acgccaccat cggcattgat ggcgatgtag
     2941 gagtcgagct cgctcgggac gagcggcggc ctggtgccct gggccgcggc cgagttgacc
     3001 gcgagcacgg tgtcgaggcc gaccggcatg ccgaccgaga cgaccagggc gccgccggcc
     3061 ttgagcagcg agcggcggga aaacgtcgag ggcttgtcca tccttgtcat cgtcgcctcc
     3121 cctcagccca tcatctcgga cgcgcgcttc acggcgcgca tgatgccgta atgcgtgccg
     3181 caccggcatt tgaggcccgt gagcgcctcc ttgatctcgc catcggtcgg cttcttgttt
     3241 tcggcaagca gggccgcccc ggtcatgatc cagccattga tgcagtagcc gcattgcggc
     3301 acctgctcct cgatgtaggc gacctgcagc ggatgcggct tttcaggggt gccgagccca
     3361 gccagggtga cgaccttggc cgtcccgaca gccgacaggg gcgtcacgca ggatcggatg
     3421 gccttgccgt cgagatgcac ggtgcaggcc ccgcattgcg cgaggccgca gccgaatttg
     3481 ggattgttga ggccgatgtc gttgcgcagg gcatacagca acggcatgtc ggggtcggct
     3541 tcgaccacgt ggtccttgcc gttcacgttc agtgagaagc gctcggtcat cgtcgcgttt
     3601 tcctccatgc gagccgatat cggccgctcc tcgcgcgaag gcttcgcgcc gcggccgagg
     3661 ggcaagccac ttttgcccac gcttaatcca gatttccggc ccggggaaca gtcttgtcgg
     3721 gccggccccg ttcacgatcg cgatcgggac cggcttggct ttggagcacg ccagattgt
//
LOCUS       DATAIQ010000185         3917 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_50430, whole genome shotgun sequence.
ACCESSION   DATAIQ010000185 DATAIQ010000000
VERSION     DATAIQ010000185.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3917)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3917)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3917
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_50430"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            295..1188
                     /gene="dapA"
                     /locus_tag="VHN20_03205"
     CDS             295..1188
                     /gene="dapA"
                     /locus_tag="VHN20_03205"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015928172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008840 - 4-hydroxy-tetrahydrodipicolinate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HEX2724810.1"
                     /translation="MAGNGKLRGSLTALVTPFRDGAVDEDAFRAHVDWQIENGTHGLV
                     PVGTTGESPTLSHDEHKQVVEACVREARGRVPVVAGAGSNSTAEAVDFSRHAEDAGAD
                     AVLIVTPYYNKPTQEGLYRHFKAINDAIGIPILIYNIPGRSVIDMSVDTMKRLYELKN
                     IVGVKDATANVARVSLQRQAMGPDFIQLSGEDATALGFMAHGGHGCISVTSNVAPKQC
                     SEMQEACLDGDYASAIRVQDRLMPLHTALFVETNPSPAKYALSVLGRMTDEVRLPMVP
                     VSDGTRQAVRAAMVHAGLINA"
     gene            1196..1669
                     /gene="smpB"
                     /locus_tag="VHN20_03210"
     CDS             1196..1669
                     /gene="smpB"
                     /locus_tag="VHN20_03210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HEX2724811.1"
                     /translation="MAKDARNAHRVVADNRKARFNYEIVEALEAGIALTGTEVKSLRG
                     GKANIGDAYAGPSGEELFLFNAYIPEYLQANRFNHETRRPRRLLLHKRQINKLIGATQ
                     REGFTLIPLKIYFNERGRAKVELGLGRGKKLHDKRETEKRRSWDRERARLMREKG"
     gene            complement(1776..2444)
                     /locus_tag="VHN20_03215"
     CDS             complement(1776..2444)
                     /locus_tag="VHN20_03215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012254477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HEX2724812.1"
                     /translation="MIGQQRIALFIDGANLYATTKTLGFDIDYKRLLKEFQSRGFLIR
                     AFYYTALVEDQEYSSIRPLIDWLDYNGYSVVTKPTKEFVDSAGRRKVKGNMDIELAID
                     ALELAPHVDHVVLFSGDGDFRSLVEALQRRGVRVSVVSTISTQPPMVADELRRQADEF
                     IDLAHLIPQIGRDPAVRAERAARAGEYGERQERPRYGSNPGGLERRYGIRQAPASDDV
                     VDNT"
     gene            complement(2684..3268)
                     /gene="pyrE"
                     /locus_tag="VHN20_03220"
     CDS             complement(2684..3268)
                     /gene="pyrE"
                     /locus_tag="VHN20_03220"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004588 - orotate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HEX2724813.1"
                     /translation="MTPTEVLDEFRAAGALLEGHFILTSGLHSSLFLQKMFVFMDPVR
                     TERLCRALAQAIREKFGEVDIVISPAVGGIVPGYETARQLGAKAMFVEREAGRFALRR
                     GFTIPPSARVVMVEDIITTGLSSRECLAAISEQPGTIVGAACLIDRSGGKADLGVPLV
                     SLVTMDIPNYPADQLPPELAAIPAVKPGSRNLKM"
     gene            3469..>3917
                     /locus_tag="VHN20_03225"
     CDS             3469..>3917
                     /locus_tag="VHN20_03225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724814.1"
                     /translation="MSELCSARADRRWSVATIVLALAAALAGCQPARALSDVTAADIA
                     KGTTITRSACLSQTNAVWVEHARGDVCIRYYVAGRPAAERDLVVFFDGDIGYVDASVM
                     RVEDVSRPEIMSARAHQKAADELSRALAQVVVVVARPGLGGSSGWHG"
BASE COUNT          696 a         1244 c         1325 g          652 t
ORIGIN      
        1 gtcccgaaaa ccatcaagcc aaccccttgt gcgtccaggg atcgttcttc gtcggacgat
       61 ccaccttatg aaaaactagt ttaccaccga tgaaaagtct ggcgccccgc gtttgcgcaa
      121 gcccgcgcta acctttatgt gtcgagagaa gagccgggct ttgtggcaat cgcagggctc
      181 gcccgcatga taccggcgaa agccgcccga ctcgacccga ggtcatgcgg ctcgaaagac
      241 atccgagccg gatcgattcg attttgaagc ggtccccgct ccaggagcgc cgtcatggct
      301 ggcaatggaa agctgagggg ctcgctgacg gccctggtca ccccgtttcg cgacggcgcc
      361 gtcgacgagg acgcctttcg cgcgcatgtc gactggcaga tcgagaacgg cacgcatggt
      421 ctcgtgccgg tcgggacgac gggcgagagc ccgacgctga gccacgacga gcacaagcag
      481 gtcgtcgagg cgtgcgtgcg cgaggccagg ggccgcgttc cggtggttgc cggcgccggc
      541 tcgaactcga ccgccgaggc ggtcgacttc tcgcgccacg ccgaggatgc gggcgccgac
      601 gccgtcctga tcgtcacgcc ctattacaac aagccgaccc aggaaggcct ctaccggcac
      661 ttcaaggcga tcaacgacgc catcggcatc ccgatcctca tctacaacat ccccgggcgc
      721 tcggtgatcg acatgtcggt cgataccatg aagcggctct acgagctcaa gaacatcgtc
      781 ggcgtgaagg acgcgaccgc caacgtggcg cgggtcagcc tgcagcgcca ggcgatgggc
      841 ccggacttca tccagctctc gggcgaggac gccaccgcgc tcggcttcat ggcgcatggc
      901 ggccacggct gcatctccgt gacctcgaac gtggcgccga agcagtgcag cgagatgcag
      961 gaggcatgcc tcgacggcga ctacgcgagc gccatccgcg tccaggaccg gctgatgccg
     1021 ctgcacacgg cgctgttcgt cgagaccaac ccgtcgccgg ccaagtatgc cttgtccgtc
     1081 ctcggccgca tgaccgatga ggtgcgcctg ccgatggtgc cggtgtcgga tggcacgcgg
     1141 caggcggtgc gggcggcgat ggtccatgcc ggcctgatca acgcctgacg cgagaatggc
     1201 aaaggatgcg aggaacgccc atcgggtcgt cgccgacaac cggaaggcgc gcttcaatta
     1261 cgagatcgtc gaggcgctcg aggccggcat cgcgctgacc ggcaccgagg tcaagtcgct
     1321 gcgcggcggc aaggccaata tcggggacgc ttatgccggc ccgtccggcg aggagctgtt
     1381 cctgttcaac gcctatatcc ccgaatacct gcaggccaac cgcttcaatc acgagacgcg
     1441 gcggccgcgc cgcctgctgc tgcacaagcg ccagatcaac aagctgatcg gcgccacgca
     1501 gcgggagggt ttcacgctga tcccgctcaa gatctatttc aacgagcgcg ggcgggcgaa
     1561 ggtcgagctc ggcctcggcc gcggcaagaa gctgcacgac aagcgcgaga ccgagaagcg
     1621 ccggtcctgg gaccgcgagc gcgcccgcct catgcgcgag aaggggtgag gccggggcgc
     1681 gccgaggagc gggcagggct caattcacaa ccgcctcgcc gcactatttt gctggaatct
     1741 gtggccgtcg ccgcgccgtc ggcgcggttc cgccctcagg tgttgtcgac gacgtcgtcg
     1801 ctcgccggcg cctggcggat gccgtagcgg cgttcgaggc cgcccgggtt gctgccgtag
     1861 cgcgggcgct cctgccgctc gccgtactcg ccggcgcgcg cggcgcgctc ggcccgcacc
     1921 gcggggtcgc ggccgatctg ggggatcagg tgcgcgaggt cgatgaattc gtcggcctgg
     1981 cggcgcagct cgtcggcgac catggggggt tgtgtcgaaa tggttgacac aacggagaca
     2041 cgcaccccgc gccgctgcag cgcctcgaca agcgagcgga agtcgccatc gccggaaaac
     2101 agcaccacgt ggtcgacatg cggcgccaac tcgagcgcgt cgatggcgag ctcgatgtcc
     2161 atgttgccct tgaccttgcg gcggccggcg gagtcgacga attccttggt cggcttggtg
     2221 acgacggagt agccgttgta gtcgagccag tcgatgagcg ggcggatcga ggaatattcc
     2281 tggtcctcga cgagggcggt gtaatagaac gcccgtatca ggaagccgcg gctctgaaat
     2341 tccttgagca gtcgcttgta atcgatgtcg aagcccagcg ttttcgtggt cgcataaaga
     2401 tttgcgccgt caataaacag ggcaatgcgt tgctggccta tcatagaagc aatctcgcgt
     2461 ccggtggcgc cgccgctcta cagccacaac cttcttgttc tctggtaagc gatgcttggc
     2521 ccgggcgcgc cgaacatgct gccgaaagtt acgcgacaac gaaggctctg cacgggcctg
     2581 ataacagtcg aatatcaggt tcacgaacga gtgaaccttt gatgaagcac tgtcaagctt
     2641 ctgggacgag ttcgtaacaa aaaaaataca acgccggttt tggtcacatc ttcagattgc
     2701 ggctgcccgg cttcacagcc ggaatggcgg cgagctcggg cggcagctgg tcggccgggt
     2761 aattggggat gtccatcgtc accagcgaga cgagcggcac gccgagatcg gccttgccac
     2821 ccgagcggtc gatcaggcaa gcggcaccca cgatcgtgcc gggctgctcg ctgatggcgg
     2881 cgaggcattc gcgtgacgac aggccggtcg tgatgatgtc ctcgaccatc accacgcggg
     2941 ccgacggcgg gatggtgaag ccgcgccgca gcgcgaagcg gccggcctcg cgctcgacga
     3001 acatcgcctt ggcgccgagc tgccgcgccg tctcgtagcc gggcacgatg ccgccgaccg
     3061 ccggcgagat gacgatgtcg acctcgccga atttttcgcg gatcgcctgc gccagcgcac
     3121 ggcacagccg ctcggtccgg accggatcca tgaacacgaa catcttctgc aggaagagcg
     3181 agctgtgcag ccccgaggtc aggatgaaat ggccttcgag cagcgcgccg gcggcgcgga
     3241 attcgtccag aacctcggtc ggggtcatgc ctgtgctctt tcgtgcgacg gcgccttttg
     3301 gcaggggtgc gggtggggcg caagccgggt gagagcagtc gacgaagacg atctcggtga
     3361 tcattaatga ggttcggcta tacaacggcc atgtgcatgg tagggccccc gactagacat
     3421 ggcgtgccca gcgacggccg atctggtgct cgagtgcgag gttctattgt gagcgagctg
     3481 tgttcggcgc gcgccgatcg gcgctggtca gtggcaacga tcgtgctggc cctcgctgcg
     3541 gccctggcag gctgccagcc tgccagggcg ctctcggacg tgaccgcagc ggacatcgcc
     3601 aagggcacca ccatcacacg gagcgcctgc ctctcgcaga cgaatgccgt ctgggtcgag
     3661 cacgcgcgcg gtgacgtctg catccgctac tatgtggcgg ggcgccctgc ggcggaacgc
     3721 gacctcgtcg tgttttttga cggcgacatt ggctacgtcg acgctagtgt gatgcgagtc
     3781 gaagatgtct ctcggccgga gattatgtca gcgcgggccc atcagaaagc cgccgacgag
     3841 ttgtcgcgag cacttgcgca agtggttgta gtcgtggccc gcccgggcct cggcgggtcg
     3901 tctggctggc acggctg
//
LOCUS       DATAIQ010000186         1756 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_101811, whole genome shotgun sequence.
ACCESSION   DATAIQ010000186 DATAIQ010000000
VERSION     DATAIQ010000186.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1756)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1756)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1756
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_101811"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            228..1004
                     /gene="lptB"
                     /locus_tag="VHN20_03230"
     CDS             228..1004
                     /gene="lptB"
                     /locus_tag="VHN20_03230"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HEX2724815.1"
                     /translation="MFGAKRREASDTAAAFGGPGMLAVRGLQKSYRGRTVVHDAALHV
                     RNGEAVGLLGPNGAGKTTIFYMITGLVSADRGMISLDGNDITHLPMYRRARLGIGYLP
                     QEASIFRGLDVEDNIRGVLEVVEPNRREREAKLEELLDEFNITRLRKSPSIALSGGER
                     RRCEIARALAGSPSFMLLDEPFAGIDPIAVGDIQNLVRHLTGRGIGVLITDHNVRETL
                     ALTDRAYIIHSGRVLTEGRPEEIVANEDVRRLYLGEDFRL"
     gene            1196..>1756
                     /locus_tag="VHN20_03235"
     CDS             1196..>1756
                     /locus_tag="VHN20_03235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012253918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma-54 factor"
                     /protein_id="HEX2724816.1"
                     /translation="MALIQRLEMRQGQSLVMTPQLLQAIKLLQLSHLDLAAYVEAELE
                     RNPLLERPESDEAGGEPEPSRANGSDVEAEDGGDHDFGDGDAAEPWLKTDLKPDRADL
                     EGDFDTRLDNVFPDEAGGRERPATDTGDNVSLASSPWTSVGGGGFDGELPDFDATLRT
                     EATLHEHLQTQLDLATADAAERFIGRN"
BASE COUNT          276 a          631 c          588 g          261 t
ORIGIN      
        1 tggctcgggg cagcccttcc gcttcgccgg ctggccagct tcgtggatat tgcagtcctt
       61 tgacctcgat catcgacacc cgcggccgca accagggcgg cgacccgctc cgccggcagg
      121 cgaccccggc gccggcgcgc gctccggcgg cgtatgcgcg ggcaccggcc gaggcgccgg
      181 gccggcccga ggcgacgcgc gcgaaccgcg gatcgttcct gcgccggatc tttggcgcaa
      241 agcgccggga agcgtccgac accgccgcgg ccttcggcgg ccccggcatg ctcgccgtcc
      301 gcgggcttca gaaaagctat cgcggccgga ctgtggtgca cgacgccgcc ctgcatgtgc
      361 gcaacggcga ggccgtcggt cttcttggtc ctaacggcgc cggcaagacc acgatcttct
      421 acatgatcac gggcctcgtc tcggccgatc gcgggatgat cagcctcgac ggcaacgaca
      481 tcacgcacct gccgatgtat cgccgggccc ggctcggcat cggctatctg ccgcaggagg
      541 cctcgatctt ccgcggcctg gacgtcgagg acaacatccg cggcgtgctg gaagtggtcg
      601 agcccaatcg ccgcgagcgc gaggccaagc tcgaggaact gctcgacgag ttcaacatca
      661 cgcgtctgcg caagtcgccc tcgatcgcgc tgtccggcgg cgagcggcgg cgctgcgaga
      721 tcgcccgcgc cctggccggg tcgccatcct tcatgctgct cgacgagccc ttcgccggca
      781 tcgacccgat cgccgtgggc gacatccaga acctggtgcg ccacctcacc gggcggggca
      841 tcggcgtcct catcaccgac cacaatgtgc gcgagaccct ggccctcacg gaccgtgcct
      901 acatcatcca ttccgggcgc gtcctgaccg agggccggcc ggaggagatc gtcgccaacg
      961 aagacgtgcg ccggctgtat ctgggcgagg atttccgcct ctgatctgag tccggcgcgg
     1021 cggttccctg cgggacggat cgcaccccga attttgatcc gcgcctccac gagctccggg
     1081 cctgcgaccg ttggctgcat gctgcagcgc agcaaaggcc tatagaaaat cgtaacggag
     1141 tcatgcaaaa aacgtgccga ggcccctcgt tggcgcctcg ggccaggacg tcgcgatggc
     1201 attgatccaa cggcttgaga tgcgccaggg ccagtccctg gtgatgacgc cgcagcttct
     1261 gcaggcgatc aagctgctgc agctgtcgca tctcgacctc gccgcttacg tcgaggccga
     1321 gctcgagcgc aatccgcttc tcgagcggcc cgagtcggac gaggccggcg gcgagcctga
     1381 gccgtcgcga gccaacggca gcgacgtcga ggcggaggat ggtggcgacc atgacttcgg
     1441 cgacggcgac gcggccgaac cgtggctcaa gaccgatctc aagcccgacc gggcggacct
     1501 cgagggcgac ttcgatacgc gcctcgacaa cgtcttcccc gacgaggcgg gcgggcgcga
     1561 gcgcccggcc accgataccg gcgacaacgt ctcgctggcg tcgtcgccct ggaccagcgt
     1621 cggcggcggc ggctttgacg gcgagctgcc cgatttcgat gcgacgctgc gcaccgaggc
     1681 gacgcttcac gagcatctcc agacgcagct cgacctcgcc acggccgatg cggcggagcg
     1741 cttcatcggc cgcaac
//
LOCUS       DATAIQ010000187         4142 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_424812, whole genome shotgun sequence.
ACCESSION   DATAIQ010000187 DATAIQ010000000
VERSION     DATAIQ010000187.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4142)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4142)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4142
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_424812"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..435)
                     /locus_tag="VHN20_03240"
     CDS             complement(<1..435)
                     /locus_tag="VHN20_03240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012455260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HEX2724817.1"
                     /translation="MMRQYQLVERVKRYNPAADEALLNRAYVYAMKAHGSQKRASGDP
                     YFGHPLEVAAILTDLKLDEATIAAAVLHDTVEDTEATLDEIKTRFGRQIGELVDGLTK
                     IKRLDLVSKRAAQGENFRKLLLAIAADVRVLLVKLADRLHNMR"
     gene            complement(606..989)
                     /gene="rpoZ"
                     /locus_tag="VHN20_03245"
     CDS             complement(606..989)
                     /gene="rpoZ"
                     /locus_tag="VHN20_03245"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020185029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000345 - cytosolic DNA-directed RNA
                     polymerase complex [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HEX2724818.1"
                     /translation="MARVTVEDCIDKVENRFELVLLAAHRARLLSSGAQLTIERDRDK
                     NPVVALREIADETISPEDLREQLIHSLQKYVEVDEPEAETVPLIGAPAGGGDDTEVQF
                     DRMSEEDLLRGLEGLVPPTHTEEEE"
     gene            1149..2114
                     /gene="fabD"
                     /locus_tag="VHN20_03250"
     CDS             1149..2114
                     /gene="fabD"
                     /locus_tag="VHN20_03250"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004314 - [acyl-carrier-protein]
                     S-malonyltransferase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HEX2724819.1"
                     /translation="MRAFIFPGQGSQTVGMGKGLAEAFPAARAVFDEVDEALSQKLSR
                     VMWEGPAEELTLTANAQPALMAVSLAALRVLEAEAGLDLARDAAFVAGHSLGEYSALA
                     AARSLPVALTARLLRIRGDAMQSAVPVGQGAMAALLGLDETVARQVAEEAAQGQVCDV
                     ANDNGGGQVVVSGDKAAVERAVAVAQTRGAKRAVMLTVSAPFHCALMAPAAETMREAL
                     RGATIAPPVVPVVANVEAAPIREPEAIRDALVRQVTGTVRWRESVARMAADGVTSFVE
                     VGAGKVLTGLVKRIAAGATSAAVGTPDDVAAFAASLKPECETASR"
     gene            2199..2936
                     /gene="fabG"
                     /locus_tag="VHN20_03255"
     CDS             2199..2936
                     /gene="fabG"
                     /locus_tag="VHN20_03255"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003599979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004316 - 3-oxoacyl-[acyl-carrier-protein]
                     reductase (NADPH) activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-[acyl-carrier-protein] reductase"
                     /protein_id="HEX2724820.1"
                     /translation="MFDLTGRKALVTGATGGIGGAIARMLHAQGATVALSGTRRAALD
                     EVASELGARVHVLEANLSDKDAVEALVPAAEAAMDGLDILVNNAGITRDNLFLRMKDD
                     EWESVIAVNLTAAFRLSRAAVKGMMRRRYGRIVNIGSVVGSTGNPGQGNYAASKAGLI
                     GMTKALAAEVASRNITVNCVAPGFIESPMTDALNDKQREAILGSVPMARLGTGADVAS
                     AVLYLASQEAGYVTGHTLHVNGGMAMF"
     gene            3201..3437
                     /locus_tag="VHN20_03260"
     CDS             3201..3437
                     /locus_tag="VHN20_03260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018044468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HEX2724821.1"
                     /translation="MSDIAERVKKIVVEHLGVEADKVTENANFIDDLGADSLDTVELV
                     MAFEEEFNVEIPDDAAETIVTVGDAIKFLEKSAA"
     gene            3494..>4142
                     /locus_tag="VHN20_03265"
     CDS             3494..>4142
                     /locus_tag="VHN20_03265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013502074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl synthase N-terminal-like
                     domain-containing protein"
                     /protein_id="HEX2724822.1"
                     /translation="MRRVVVTGLGMVTPLGCGVDATWRKLIAGTSGAAKVAAFDVSDL
                     ACKIACSIPRGDGSDGTFNADQWMDPKDQRKVDPFIVFAMAAARQALDDAGWRPTSYE
                     DQTRTGVLIGSGIGGIGGIYDASITLAEKGPRRISPFFIPGRLINLASGYVSIEFGLK
                     GPNHSVVTACSTGAHAIGDAARLIGLGDADVMVAGGAESPINRLSLAGFAACRALS"
BASE COUNT          643 a         1386 c         1444 g          669 t
ORIGIN      
        1 gcgcatgttg tgcaggcggt cggcgagctt gacgagcagc acgcgcacgt cggccgcgat
       61 ggcgagcagc agcttgcgga aattctcgcc ctgcgcggcg cgtttcgaga cgaggtcgag
      121 acgcttgatc ttggtgaggc cgtcgaccag ctcgccgatc tggcgtccga acctggtctt
      181 gatctcgtcg agggtggctt ccgtgtcctc caccgtatcg tggagcacgg ccgcggcgat
      241 cgtcgcctcg tcgagcttga ggtcggtgag gatggccgcg acttcgaggg gatgcccgaa
      301 ataggggtcg cccgacgccc gcttctggct gccatgcgcc ttcatggcat agacgtaggc
      361 ccggttgagc agcgcctcgt cggcggcggg gttataccgc ttcacgcgct cgacgagctg
      421 gtattgacgc atcatccagg ggccgaccct tcaactggcc atcgatttcg gccatcgatc
      481 tgccgggcta cgatattggc cgcgctgccg taaccgcaag gtttacggcg tcgcaacacg
      541 gctcctggca acaaaaaagc ccggccgggg ccgggctttc ctgagacgtc cttaaaggac
      601 aggcctcatt cttcctcttc cgtgtgggtc ggcggcacaa ggccctcgag gccgcgcagg
      661 aggtcttcct cgctcatgcg gtcgaactgg acctcggtgt cgtcgccgcc gccggccggc
      721 gcgccgatca gcggcacggt ctcggcctcg ggctcgtcca cctcgacgta tttctgaagc
      781 gagtggatca gctgctcgcg caggtcctcg ggcgagatcg tctcgtcggc gatctcgcgc
      841 agggcgacga ccgggttctt gtcgcggtcg cgttcgatgg tgagctgggc gcccgacgac
      901 agcagacggg cgcggtgggc ggcgagcagc acgagctcga accggttctc gaccttgtcg
      961 atgcaatctt cgacggtcac acgagccatc gtcggctcct tttctggacg gataggaacg
     1021 gaatttcggg gagggcgctg tctacaccga accgggtgcc ggatgcaagg gctcgagacc
     1081 tccgggcgct tgactcgcct gcggcacggt gccagtgccg ggccacctcg gagggggttt
     1141 ttggggcgat gcgggcattc atctttccag ggcagggcag ccagaccgtg ggcatgggca
     1201 aggggctggc ggaggcattt ccggcggcgc gggccgtttt cgacgaggtc gacgaggccc
     1261 tctcgcaaaa actctcgcgc gtcatgtggg agggccctgc cgaggagctc accctgaccg
     1321 ccaacgccca gccggccctc atggccgtga gcctagccgc cctgcgcgtg ctcgaggccg
     1381 aggccggcct cgatctcgcc cgcgacgccg ccttcgtggc cggccattcg ctcggcgaat
     1441 attccgccct ggcggcagcg cgcagcctgc cggtggccct gaccgcccgt ctcctgcgca
     1501 tccgcggcga cgccatgcag tccgccgtcc cggtggggca gggcgccatg gcggcgcttc
     1561 tcgggctgga cgagaccgtc gccaggcagg tggcggagga ggcggcccag ggtcaggtct
     1621 gcgacgtcgc caacgacaat ggcggcgggc aggtcgtggt gtcgggcgac aaggcggcgg
     1681 tcgagcgcgc ggtagccgtg gcccagacgc gcggcgccaa acgggcggtg atgctcaccg
     1741 tgtcggcgcc cttccattgc gccctgatgg cgccggcggc ggagaccatg cgcgaggcgc
     1801 tgcgcggcgc gaccattgcg ccgccggtcg tgccggtggt cgccaatgtc gaggccgcgc
     1861 cgatccgcga gcccgaggcg atccgggacg ccctcgtgcg gcaagtgacg ggaacggtgc
     1921 gctggcgcga gagcgtcgcg cgcatggccg ccgacggggt caccagcttc gtcgaggtcg
     1981 gtgccggaaa agtcctgacc gggctcgtca agcgcatcgc cgcgggcgcg acctccgcgg
     2041 ccgtcggaac gccggacgac gtcgccgcgt tcgccgcgtc actcaagccg gagtgcgaaa
     2101 cggcttcacg gtgaagccgt ttgctctcct tctttgtgtc gcatgatctt tttcggcaaa
     2161 gcggttccca ctttgccgga tcatgccgga ggcaaaccat gttcgatctg accggccgca
     2221 aagctctcgt gacgggcgcc acgggaggca tcggcggcgc catcgcccgc atgctgcacg
     2281 cgcagggcgc cacggtggcg ctgtcgggca cgcgccgcgc cgccctcgac gaggtggcaa
     2341 gcgagctcgg cgcgcgcgtg cacgtgctcg aggccaacct ctcggacaag gacgccgtcg
     2401 aggcgctcgt cccggctgcc gaggccgcga tggatggcct cgacatcctc gtcaacaatg
     2461 ccggcatcac ccgcgacaac ctcttcctgc gcatgaagga cgacgagtgg gagagcgtga
     2521 tcgccgtcaa cctgacggcg gccttccggc tgtcgcgcgc cgccgtgaag gggatgatgc
     2581 gccgccgcta cggacgcatc gtcaatatcg gctcggtcgt cggctcgacg ggcaatcccg
     2641 gccagggcaa ctatgccgca tccaaggccg gcctgatcgg catgaccaag gcgctcgcgg
     2701 cggaagtggc gagccgcaac atcacggtca actgcgtcgc ccccgggttc atcgaatcgc
     2761 cgatgaccga cgccctcaac gacaagcagc gcgaggctat cctcggcagc gtgccgatgg
     2821 cgaggctcgg caccggcgcc gacgtggcga gcgccgtcct ctatctcgcc tcgcaggagg
     2881 ccggatacgt gaccgggcac acgctgcacg tgaatggcgg catggccatg ttctgagccg
     2941 gccggcgcgg ctcggcttgc ggccgagctt tcccaggtgt gggaaaggcc ttggcggccc
     3001 ttggccggcc ctcgccagac gccggagcct atgttaagca gcaaaagacg gtcggggggc
     3061 ttgaccaacg agcgaaattc cggctttgca cggcacgatc gtggctgtga caagcgcatt
     3121 gacgtaatgc gattgccgcc gttttccaga agcgccgtcg ccgacggacc cccaacgacg
     3181 tgtggatacg agggttgaac atgagtgata tcgctgagcg tgtgaagaaa atcgttgtcg
     3241 agcacctcgg cgtagaggcc gacaaggtga ccgagaacgc caacttcatc gacgatctcg
     3301 gcgccgacag cctcgacacc gtcgagctcg tgatggcgtt cgaagaggaa ttcaacgtcg
     3361 agatccccga tgacgccgcc gagaccatcg tcacggtcgg cgatgccatc aagttcctcg
     3421 agaaaagcgc cgcgtgacct tgcaccaggg ccgccattcg ggcgcctgcg cccgaacggc
     3481 ataggacagc gcgatgcggc gcgtcgtcgt caccgggctg ggcatggtga cgccgcttgg
     3541 ctgcggcgtc gacgcgacct ggcgcaagct catcgcaggc acgagcggag ccgcgaaggt
     3601 cgcggctttc gacgtgtcgg accttgcctg caagatcgcc tgctcgatcc cgcgcggcga
     3661 cggctcggac ggcacgttca atgccgacca gtggatggac cccaaggacc agcgcaaggt
     3721 cgatccgttc atcgtctttg cgatggccgc cgcccgccag gcgctcgacg acgccggctg
     3781 gcggccgacg tcatatgaag accagacccg caccggcgtc ctgatcggct cgggcatcgg
     3841 cggcatcggc ggcatctacg acgcctcgat cacgctggcc gagaaggggc cacggcgcat
     3901 ctcgccgttc ttcatccccg gccggctgat caacctcgcg tccggctacg tctcgatcga
     3961 gttcggcctc aaggggccga accactcggt ggtgacggcc tgctcgaccg gcgcccacgc
     4021 catcggcgat gcggcccgcc tgatcgggct cggcgatgcc gacgtgatgg tagcgggcgg
     4081 ggcggaatcg cccatcaacc ggctctcgct ggccggcttc gcggcctgcc gggcgctctc
     4141 ga
//
LOCUS       DATAIQ010000188         2868 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_188945, whole genome shotgun sequence.
ACCESSION   DATAIQ010000188 DATAIQ010000000
VERSION     DATAIQ010000188.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2868)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2868)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2868
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_188945"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..691
                     /locus_tag="VHN20_03270"
     CDS             <1..691
                     /locus_tag="VHN20_03270"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HEX2724823.1"
                     /translation="FVLQFALLFIGMESGMPPGLASVLMQSQVFFTIVFAAVALGERP
                     RARHLVGMVIAAAGIVAIGASVGGQGSDMTWLGLALVLTASACWAVGNVIMRGVGPVE
                     FLPMTVWMSLVAPLPLLAVSLLVEGPGAVADALSQWSWRGAGSIVFQGAVATLAGYGL
                     WAHLLRRYPASLVAPYSLLVPVFGIVSSAIMFGERFGVLRLFGMALILVGIAVVALPT
                     KRFARKPSAAS"
     gene            complement(728..1039)
                     /locus_tag="VHN20_03275"
     CDS             complement(728..1039)
                     /locus_tag="VHN20_03275"
                     /inference="COORDINATES: protein motif:HMM:NF021505.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2231 domain-containing protein"
                     /protein_id="HEX2724824.1"
                     /translation="MASRRGAADGGAAAVAGLIDFFGDERIRNISAAWHHMIGNVIAV
                     LLSLWNRYLRYSGGEAAIKPTGVLISLVVVLILLYTGWRGWEMVYAHRVAVLSEPDRG
                     P"
     gene            1297..1578
                     /locus_tag="VHN20_03280"
     CDS             1297..1578
                     /locus_tag="VHN20_03280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007562897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724825.1"
                     /translation="MLRKVVLASIAAAGLGLALAGSVSAAKAQSWQGETYGAGAYRSG
                     RHDGGWDRGWHRRHHQRHYGQPPWRRWHWSRHVPPGHYYGRPVAPRPYW"
     gene            complement(1626..2063)
                     /locus_tag="VHN20_03285"
     CDS             complement(1626..2063)
                     /locus_tag="VHN20_03285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YqaA family protein"
                     /protein_id="HEX2724826.1"
                     /translation="MGHFDDYLGLFTASFLAATVLPFQSEVVLFGMLLTHHYVWWGLV
                     IVASLGNILGSVVNWLLGRGLAQFENRRWFPVKREQIARAEAWYHAYGRWSLLLSWLP
                     IIGDPLTIAAGALREPFPVFLALVSIAKIARYVAVAAITHEWF"
     gene            complement(2176..>2868)
                     /locus_tag="VHN20_03290"
     CDS             complement(2176..>2868)
                     /locus_tag="VHN20_03290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012335578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase family protein"
                     /protein_id="HEX2724827.1"
                     /translation="GAWHGGWCWSRVAGRLRAAGHRVFTPTCTGLGERAHLMSRDITL
                     DTFTDDIANVIDAEELTDVILVGHSFGGLPVSGVAERMPSRLHHLVYLDALLVEPGQR
                     PFDILAPEVVARRLKSAEDSSGGISLPPQPPETFGVTNPADIAWLARRLTPHPLGTYT
                     SPLNIRNQIGNGLPRTYVACTNPTYGFLDPVKAWLRGQDGWHVLAMASGHDAMITAPD
                     ELARILIEVAEA"
BASE COUNT          442 a          969 c         1008 g          449 t
ORIGIN      
        1 gttcgtgctg cagttcgcgc ttctgttcat cggcatggag tccggcatgc cgcccgggct
       61 cgcctccgtg ctgatgcagt cgcaggtctt cttcacgatc gtgttcgccg cggtggcgct
      121 cggcgagcgg ccgcgcgcgc gccacctcgt cggcatggtc atcgctgcgg ccgggatcgt
      181 ggccatcggc gccagcgtgg gcgggcaggg aagcgacatg acgtggctcg gccttgcgct
      241 ggtgctgaca gcctccgcct gctgggccgt cggcaacgtc atcatgcgcg gggtcgggcc
      301 ggtcgagttc ctgccgatga ccgtgtggat gagcctcgtg gcgccgctgc cgctgctcgc
      361 cgtgtccctg ctcgtcgaag ggccgggggc cgtcgccgac gcgctgagcc aatggtcgtg
      421 gcgcggcgcc ggctcgatcg tgttccaggg agcggtcgcg accctcgccg gctacggctt
      481 gtgggcgcac ctgctgcggc gttatccagc gagcctcgtc gcaccgtatt cgctgctcgt
      541 gccggtcttc ggcatcgtct cgtcggcgat catgttcggc gagcgcttcg gcgtcctgcg
      601 gctcttcgga atggcgctga tcctggtggg tatcgccgtc gtggcgctgc cgacgaagcg
      661 cttcgcgcgg aagccgagcg ccgcatcctg atcgcttccc cgcaactaga gatcgccggc
      721 tcgtgtatta ggggccgcgg tccggctcgc tcaggacggc gacgcgatgg gcatagacca
      781 tctcccagcc gcgccatccg gtgtagagca ggatcagcac gacgacgagc gagatcagca
      841 cgccggtcgg cttgatcgcg gcctcgccgc cgctgtagcg cagataccgg ttccacagcg
      901 acagcaggac cgcaatgacg ttgccgatca tgtggtgcca ggcggcggag atgttgcgaa
      961 tgcgctcgtc accgaagaag tcgatcagac cggcgaccgc ggcagcgccg ccatcagcag
     1021 cgccccgccg agaagccaca gggtggcggc cgcaaagccg ctgttcccgg ccgggtgctg
     1081 ctgggtggct ggacgccagg cgggccgaaa ggttcccgta tcggcccgga gcgatttgcg
     1141 gccagggcct gccggtgacg ccgacccgct atccgtcgga gctgcacccg cattctcaac
     1201 gctggctgaa cgaagccctc ggccttcgtt caacaacgcc tccgtagaac atcgtggatg
     1261 ctgccgattg cgaggcagcg cacggaggaa cgagagatgt tgcgcaaagt cgtgctggcc
     1321 tcgattgccg ctgccgggct cggactcgcg ctcgccgggt cagtctcggc ggcgaaggcc
     1381 cagtcgtggc agggagaaac ctatggcgcc ggcgcctatc gcagcggccg ccacgacggc
     1441 ggatgggacc gcgggtggca tcgacgccat caccagcgtc attacggaca gccgccctgg
     1501 cgccgctggc actggagccg ccatgttccg cccggccatt actacggccg tccggttgcg
     1561 ccgcgccctt actggtagcg cccggcgcgc gagcaccatc cctccccgtt gcaggggagg
     1621 gaccttcaaa accactcgtg ggtgatggcc gcgacggcga cgtagcgggc gatcttggcg
     1681 atcgagacga gcgccaggaa gaccgggaac ggctcgcgca gcgcgcctgc ggcgatggtg
     1741 agcggatcgc cgatgatcgg cagccagctc agaagcagcg accagcgccc gtaggcatgg
     1801 taccacgcct cggcgcgggc gatctgctcg cgcttgaccg ggaaccagcg gcggttctcg
     1861 aactgcgcaa gcccgcggcc cagcagccag ttcaccaccg agccgaggat gttgccgagg
     1921 ctggccacga tcaccaatcc ccaccagacg taatggtggg tcagaagcat cccgaacagc
     1981 acgacctcgg actggaacgg cagcacggtc gcggcgagaa acgacgccgt gaagagccca
     2041 agataatcat cgaagtgccc catgcctctc cccttgccgc ggtgcgtgcc ccgtggtggc
     2101 gtccggatcc aggatacgcc gcggcagccg acgacgcgcc cttcgcgacc tcccgtggcc
     2161 gcagaatggc cgaactcacg cttcggcgac ctcgatcagg atgcgcgcca gctcgtcggg
     2221 tgcggtgatc atcgcgtcgt gaccgctcgc catcgcgagg acgtgccaac cgtcctggcc
     2281 gcgcagccac gccttgaccg gatcgaggaa cccataagtc gggttcgtgc acgcgacata
     2341 ggtgcgcggc aggccgttgc cgatctgatt gcggatgttg agcgggctcg tgtaggtgcc
     2401 gagcggatgg ggggtgagcc gacgtgccag ccacgcgatg tcggccggat tcgtcacccc
     2461 aaacgtctcc ggcggctgcg gcggcaggct gattccgccg ctcgaatcct ccgcggactt
     2521 gagacgtcgc gccacgacct ccggcgccag gatgtcgaag gggcgctggc ccggttcgac
     2581 caagagggca tcgagataga cgaggtgatg caggcgtgag ggcatgcgct cggccacgcc
     2641 gctgaccggc agcccgccga aggaatggcc gaccaggatc acgtccgtca gctcctcggc
     2701 gtcgatcacg ttggcgatgt cgtcggtaaa ggtgtcgagc gtgatgtccc ggctcatcag
     2761 atgcgcgcgc tcgccgaggc cggtgcaggt cggcgtgaag acgcgatggc ccgcggcgcg
     2821 gaggcgcccg gcgacgcggc tccagcacca gccgccatgc caggcgcc
//
LOCUS       DATAIQ010000189         3051 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_286771, whole genome shotgun sequence.
ACCESSION   DATAIQ010000189 DATAIQ010000000
VERSION     DATAIQ010000189.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3051)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3051)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3051
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_286771"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(17..1228)
                     /locus_tag="VHN20_03295"
     CDS             complement(17..1228)
                     /locus_tag="VHN20_03295"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX2724828.1"
                     /translation="MIATPPSRFPGPLVTALSVAQLISWGTIFYAFTLFRDPMSRELG
                     WSKPQLPAAFSLGLAASGVGAMPVGRLIDRGHGAVVMTAGSLLAAALFWLWSRVESYA
                     VFVALWIGLGFCMSATLYEPGFAVLTRHLGAFARRAITAMTLLGGLASTAFIPITHVL
                     IEAFGWRDALLALAAFNGLVCAAIHALAVPRDAPRRAASQPADAPLQGDAARVLGSVA
                     FWGFVATAMLQGALFTGFAVHLIPLLVERGFSIEAAVAAFSLIGPAQVAARVVIALSE
                     RAASMRAIGLVTMAISVAPFALLPLIPPGTWLVAVFAVLYGAANGMMTVLRAVLPIEI
                     FGRADYGTIQGMIAAPAILSRAAGPFLLGLIWAWSGGYGAVIGVGLATAVIMLICFTL
                     TVYGAKPHAAE"
     gene            1441..>3051
                     /locus_tag="VHN20_03300"
     CDS             1441..>3051
                     /locus_tag="VHN20_03300"
                     /inference="COORDINATES: protein motif:HMM:NF014740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis protein"
                     /protein_id="HEX2724829.1"
                     /translation="MTSRRLISIVHDLVATALAVFLSFLLRWGLNGFWNQLETIAFVA
                     VIMVLAAAPVYWAFRLDRHPWRFVSISNLINIAAAASVLTALLVLLAFLTQGALVVPR
                     TVPLIYWFVQIFFLAGPRMLYRAYRTHRQERRAFQGVYRTPVLIAGTGDETDQLIRRL
                     QRDTVDPMEAVGLLTHKPAHVGERFQAIPVLGLFSELEPVLEQLQARQIKPRRLIITR
                     ESLKLEGRIDELLGSARRLGLTTVRASDALTNVERPSGTVQLAPVSIEDLLGRSTRDI
                     DVSPLRELITGRKVLVTGAGGSIGSELCRQIAAMQPERLLLLDHSELALYTIAKEVRQ
                     HASLAVEQRLGSVTDRDDIFEIFQRFRPDIVFHAAALKHVDIVETHAVAAANTNAVGT
                     RHVADAALAVDARCAVFISTDKAVNPVSVLGATKRAGELYWAASDRKCRETGKPTRFL
                     TVRFGNVLGSSGSVIPLFREQLERGGPITVTHPEVERYFMTISEAVTLVLMASALGVK
                     TAEISPTYVLDMGEPIKILELARRMIRLS"
BASE COUNT          507 a         1073 c         1044 g          427 t
ORIGIN      
        1 tccgaaatga agcgcctcat tcagccgcgt gaggcttcgc gccgtaaacg gtcagcgtga
       61 agcagatcag catgataacc gccgtagcca gccccacgcc gatcaccgcg ccgtagccgc
      121 cgctccacgc ccagatcagg ccgagcagga acgggccggc cgcccgcgac aggatcgccg
      181 gcgccgcgat catgccctga atcgtgccgt aatcggcgcg cccgaaaatc tcgatcggca
      241 gcacggcgcg caagaccgtc atcatgccat tggccgctcc atagagcacg gcgaagacgg
      301 cgacgagcca cgttcccggc gggatcagcg gcaggagcgc gaagggcgca accgaaatcg
      361 ccatcgtgac gaggccgatg gcgcgcatgc tcgcggcgcg ctcgctgagc gcgatgacga
      421 cgcgcgccgc cacctgcgcc ggaccgatca gggagaaggc ggcgaccgcc gcctcgatcg
      481 agaagccgcg ctccaccaga agcggaatca ggtgcacggc gaagccggtg aacagcgctc
      541 cctgcagcat ggccgtcgcc acgaagcccc agaaggcgac gctgccgagc acccgcgccg
      601 catcgccctg gagcggcgcg tcggcgggct ggcttgcggc gcggcggggc gcgtcgcgcg
      661 ggacggcgag agcgtggatg gcggcgcaga cgaggccgtt gaaggccgcg agcgcgagca
      721 gcgcgtcgcg ccacccgaac gcctcgatca ggacatgcgt gatcggaatg aaggcggtgc
      781 tggcgaggcc gccgagcagc gtcatggcgg tgatcgcccg gcgcgcgaac gcgccgagat
      841 ggcgggtgag caccgcaaag cccggctcgt aaagcgtggc gctcatgcag aagccgagcc
      901 cgatccacag cgccacgaac acggcgtagc tctcgacccg cgaccacagc cagaacaggg
      961 ccgcggccag cagcgagccc gccgtcatga cgacggcccc atggccgcgg tcgatcaggc
     1021 gaccgaccgg catcgcgccg acgcccgacg cggcgaggcc gagcgaaaac gccgcgggga
     1081 gctgcggctt cgaccagccg agctcgcgcg acatcgggtc cctgaacagc gtgaaggcgt
     1141 agaagatcgt tccccaggag atcagctggg cgacggacag cgcggtgacg agaggcccgg
     1201 gaaagcggga cggcggcgtg gctatcatca cggtgaagct tagcggcggc gatgcctcgg
     1261 gagtaggggc gttcgcggcg cgccgaagtc acggcgcggg ggaggggcga tcctggggaa
     1321 tagcgccgtc ttgcaccgca atcattgggg tggacgctcc aggccgccca tggacttgcc
     1381 gattgtcttg gcgtccaagg catggtctag aaccggaaca cggagaacgg gattccaagg
     1441 gtgacctcgc gtcggctcat cagcatcgtc cacgacctcg tggcaaccgc gctggccgtt
     1501 ttcctgagct ttcttttgcg ctggggcctg aacggcttct ggaaccagct cgagaccatc
     1561 gctttcgtcg cggtcatcat ggtcctcgcc gccgcgccgg tgtactgggc gttccggctc
     1621 gaccgccacc cgtggcgctt cgtctcgatc tcgaacctga tcaacatcgc cgcggcggct
     1681 tcggtgctga ccgccctgct cgtgctcctg gcctttctga cgcagggggc gctggtggtg
     1741 ccgcgcacgg tgccgctgat ctactggttc gtgcagatct tcttcctcgc cggcccgcgc
     1801 atgctctacc gggcgtaccg cacgcaccgc caggagcggc gcgccttcca gggcgtgtat
     1861 cgcacgcccg tgctgatcgc cggcaccggc gacgagacgg accagctgat tcggcgcctg
     1921 cagcgcgaca ccgtcgaccc gatggaggcg gtcggcctgc tcacgcacaa gccggcgcat
     1981 gtcggcgagc gcttccaggc cattccggtt ctcgggctgt tctccgagct cgagcccgtg
     2041 ctcgagcaac tccaggccag gcagatcaag ccgcgccgcc tgatcatcac gcgcgagagc
     2101 ctcaagctcg aaggccgcat cgacgagctg ctcggttcgg cgcgccggct cgggctcacg
     2161 accgttcgcg cttcggacgc cctgaccaat gtcgagcgcc cgagcggaac ggtgcagctc
     2221 gccccggttt cgatcgagga cctgctcggg cgctcgacgc gcgacatcga cgtgtcgccg
     2281 ctgcgcgagc tgatcaccgg ccgcaaggtg ctcgtgacgg gggccggcgg atcgatcggc
     2341 tccgagctgt gccggcagat cgccgccatg cagccggagc ggctgctgct gctcgaccat
     2401 tccgagctcg cgctctacac gatcgccaag gaggtccggc agcacgcctc gctcgccgtc
     2461 gagcagcgcc tcggcagcgt caccgaccgc gacgacatct tcgagatttt tcagcgcttc
     2521 cggcccgaca tcgtgttcca tgcggcggcg ctcaagcacg tcgacatcgt cgagacccac
     2581 gccgtcgcgg ccgccaacac caatgcggtc ggcacgcgcc acgtcgccga cgcggcgctc
     2641 gcggtcgatg cgcgctgcgc cgtcttcatc tcgaccgaca aggcggtgaa cccggtctcg
     2701 gtcctcggcg ccaccaagcg ggccggcgag ctctactggg cggcgagcga ccgcaaatgc
     2761 cgcgagacgg gcaagccgac gcgattcctg accgtgcgct tcggcaacgt cctcggctcg
     2821 agcggatcgg tgatcccgct gttccgcgag cagctggagc gcggcggccc gatcacggtc
     2881 acgcatccgg aggtcgagcg ctacttcatg accatcagcg aagccgtgac gctcgtgctc
     2941 atggcctcgg ccctcggcgt gaagaccgcg gagatctcgc cgacctacgt gctcgacatg
     3001 ggcgagccga tcaagatcct cgagctggcc cggcgcatga tccgcctgtc c
//
LOCUS       DATAIQ010000190         3036 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_378725, whole genome shotgun sequence.
ACCESSION   DATAIQ010000190 DATAIQ010000000
VERSION     DATAIQ010000190.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3036)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3036)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3036
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_378725"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            176..643
                     /locus_tag="VHN20_03305"
     CDS             176..643
                     /locus_tag="VHN20_03305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEX2724830.1"
                     /translation="MPRLNINGTMREIDVHPDTPLLWAIREQVGLTGTKYGCGIAACG
                     ACTVHVDGAAVRACSMPVSAFTAEQKIVTIEGLSPDGSHPVQKAWLELDVPQCGYCQA
                     GMIMASAALLAQKPKPTDDDINNDITNICRCGTYNRVRAAIKLAAEGGEVRRG"
     gene            656..2836
                     /locus_tag="VHN20_03310"
     CDS             656..2836
                     /locus_tag="VHN20_03310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011925452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEX2724831.1"
                     /translation="MTTALDVSRRKFLAGSAAAAGGFSFGFHIPFRGDARAANATPEI
                     NAWVVVKPDDTVVIRVARVEMGQGSLTGLAQLVAEELDCDWSKVTTEYPTPGQNVARN
                     RVWGDFQTAGSRAIRGSQEYVRKGGAAARLMLTQAAANEWKVPVSECRAAGGVITHTP
                     TGRTTTYGKVSEAAAKLEPPKDIPLKDPKDWKIAGKPLKRLDTADKLTGKQVYAIDVK
                     LPGMLNAAIRDCPVLGGKLKSFDADKVTGLPGVKKVVRVGDSAVAVIADTWWQAKTAL
                     DALPVTWDEGPNASVSSAQIADMLKAGLDSNDGVFVGNQVGDVRAAIAGAAKKVEAVY
                     SYPFQHHVTMEPMNATARYTAERCEVWTSTQNAEAALATAAEASGLPIGKCEVHRHHL
                     GGGFGRRSTSHDFVRQAVLIAKEVPDTPIKLIWSREEDMLHGCYHPITQCKLVGALDA
                     DGNVTGLHMRISGQSILATIRPDALQNGRDAAVFQGLNPGGPEGAFGYGIPNLLIDHA
                     MRNPPVRPGFWRGVNNNQNAIYVECFIDELAHAAGQDPLAFRRKLMAKFPKHLAVLNA
                     VAEGIGWDKPAPKGVYRGLAQQMGFGSYVAAAAEVSVDDSGKLKIHRIVGGTDCGHAV
                     NPEQIARQIEGSFVYGLTAALYGEITIKNGRVEQENFDTYEMMRINEMPQVDSIVLPS
                     GGFWGGVGEPTIFVAAPAVLNAIFAATGKRVRSIPLKDADLRKA"
BASE COUNT          531 a         1046 c         1025 g          434 t
ORIGIN      
        1 cataagagta gcgacgcaac aggagcgggg cgctggccct ccgaccgtcc ggaagggccg
       61 agttgcatct cgtgaacgtg atgctcgcat gccggggctg cagccgaagc cgattgacac
      121 ggcggaaggc tctttccaaa actcccgcca cattgcccga tgcgggagaa aacgcatgcc
      181 tcgtctcaac atcaatggaa ctatgcgcga aatcgacgtc catccggaca cgccgctttt
      241 gtgggcgatc cgggaacagg tcggcctgac gggcacgaaa tacggctgcg gcatcgccgc
      301 ctgcggggcc tgcaccgtgc atgtcgacgg cgccgccgtg cgcgcctgtt cgatgccggt
      361 gagcgccttc acggccgagc agaagatcgt cacgatcgag gggctgtcgc cggacggctc
      421 gcaccccgtc cagaaagcct ggctcgagct cgatgtgccg caatgcggct attgccaggc
      481 gggcatgatc atggcgtcgg cggcgttgct ggcgcagaag ccgaagccga ccgacgacga
      541 catcaacaac gacatcacca acatctgccg ctgcggcacc tacaaccgcg tgcgcgccgc
      601 catcaagctt gccgccgagg gcggcgaagt ccgccgcggg tgaggggagg ccatcatgac
      661 gactgcgctc gacgtttcgc gccgcaagtt cctggccggc tccgccgccg cggccggcgg
      721 cttctcgttc ggcttccata tcccgttccg cggtgacgcc cgcgccgcga atgcgacccc
      781 ggagatcaat gcctgggtgg tggtcaagcc cgacgacacg gtcgtgatcc gcgtcgcccg
      841 ggtcgagatg gggcagggct cgctcaccgg cctcgcccag ctcgtcgccg aggagctcga
      901 ctgcgactgg tccaaggtga cgaccgaata tccgacgccg ggccagaacg tcgcccgcaa
      961 ccgcgtctgg ggcgacttcc agacggccgg cagccgcgcc atccgcggat cgcaggaata
     1021 cgtgcgcaag ggcggcgccg ccgcgcgcct gatgctgacc caggcggccg cgaacgagtg
     1081 gaaggtgccg gtttccgagt gccgcgccgc cggcggcgtc atcacgcaca cgccgaccgg
     1141 gcgcaccacg acctacggca aggtgtctga ggcggccgcg aagctcgagc cgcccaagga
     1201 catcccgctc aaggacccga aggactggaa gatcgccggc aagccgctca agcggctcga
     1261 caccgccgac aagctcaccg gcaagcaggt ctacgctatc gacgtcaagc tgccgggcat
     1321 gctcaatgcc gcgatcaggg actgcccggt cctcggcggc aagctgaaga gtttcgacgc
     1381 cgacaaggtg acaggcctgc cgggcgtcaa gaaggtggtc cgcgtcggtg acagcgcggt
     1441 cgcggtgatc gcggacacgt ggtggcaggc aaagaccgcg ctcgatgcgc tgcccgtcac
     1501 ctgggacgaa gggccgaacg cctccgtgtc gagcgcgcag atcgccgaca tgctcaaggc
     1561 cgggctcgat tcgaacgacg gcgtctttgt cggcaaccag gtgggcgacg tgcgcgccgc
     1621 gatcgccggc gccgccaaga aggttgaggc cgtctacagc tatccgttcc agcaccacgt
     1681 caccatggag ccgatgaacg cgacggcgcg ctacacggcc gagcgttgcg aggtctggac
     1741 ttcgacccag aacgccgaag cggccctggc cacggcggcc gaggcgtcgg gcctgccgat
     1801 cggcaaatgc gaggtccacc gccaccatct cggcggcggc ttcgggcgcc gctccacgag
     1861 tcacgatttc gtgcgccagg cggtgctgat cgccaaggag gtgccggaca cgccgatcaa
     1921 gctgatctgg tcgcgcgaag aggacatgct gcacgggtgc tatcacccga tcacccagtg
     1981 caagctggtc ggcgccctcg atgccgacgg caacgtgacc ggtctgcaca tgcgcatctc
     2041 gggccagtcg atcctcgcca cgatccgccc ggatgccctg cagaacgggc gtgatgcggc
     2101 ggtcttccag ggcctcaacc ccggcgggcc ggaaggggcc ttcggctacg gcatcccgaa
     2161 cctcctgatc gatcacgcca tgcgcaaccc gccggtgcgt ccaggcttct ggcgcggcgt
     2221 caacaacaac cagaacgcca tctacgtcga atgcttcatc gacgagctcg cccatgcggc
     2281 cggccaggat ccgctcgcct tccggcgcaa gctgatggca aagttcccga agcacctcgc
     2341 ggtgctgaac gcggtcgccg aggggatcgg ctgggacaag ccggcgccga aaggcgtcta
     2401 tcgcggcctt gcccagcaga tgggcttcgg cagctacgtt gccgcggccg cggaggtatc
     2461 ggtggacgac agcggcaagc tcaagatcca ccgcatcgtc ggcggcacgg attgcggcca
     2521 tgccgtcaac ccggagcaga tcgcccgcca gatcgagggc tcgttcgtct acggcctcac
     2581 ggcggcgctc tatggggaga tcacgatcaa gaacggccgc gtcgagcagg agaatttcga
     2641 cacttacgag atgatgcgca tcaacgagat gccgcaggtc gacagcatcg tcctcccgtc
     2701 gggcggcttc tggggcggcg tcggcgagcc gacgatcttc gtcgccgcgc cggccgtgct
     2761 gaacgcgatc ttcgcggcga cgggtaagcg cgtccgctcg attccgctga aggacgcgga
     2821 tttgcgcaag gcatgaaaag gtgacagcgt agccgcccgt catcgttcct tgcgacgagg
     2881 gtccgatgaa cgcaccgagc gttttcctga tcctggcgat cgtcgcggcg gccccggccg
     2941 ccgcgcagac ggccgcgccc cccggcgcgg ccgcgtgctc cggctgccac gcgccggcga
     3001 gccgcgccgg catggcgatc ccgccgctgc gcggcc
//
LOCUS       DATAIQ010000191         1767 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_50523, whole genome shotgun sequence.
ACCESSION   DATAIQ010000191 DATAIQ010000000
VERSION     DATAIQ010000191.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1767)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1767)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1767
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_50523"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..665)
                     /locus_tag="VHN20_03315"
     CDS             complement(<1..665)
                     /locus_tag="VHN20_03315"
                     /inference="COORDINATES: protein motif:HMM:NF012451.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HEX2724832.1"
                     /translation="MVHEDYYSLLGVPRDADASAIKSAYRRLAMECHPDRTGGCKDNE
                     ARFKAISEAYDCLKDPQKRAAYDRFGHAAFRQGANGGDPFGVAGFEGFSDIFSSIFGE
                     FMDPRGQRQNAGRGSDLRYDLELTLEEAFAGANKEITIQALAQCEPCHGRGARAEARA
                     ERCQSCGGAGKVRANQGFFVVERTCPNCLGSGQTLADPCPACEGEGRAVRRRAMSVDI
                     PAGV"
     gene            complement(775..>1767)
                     /locus_tag="VHN20_03320"
     CDS             complement(775..>1767)
                     /locus_tag="VHN20_03320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_041594641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp70 family protein"
                     /protein_id="HEX2724833.1"
                     /translation="EPCKKALKDAGLEAKDIADVVLVGGMTRMPRVRERVKEFFGKEP
                     HVGVNPDEVVAMGAAIQAGVLQGDVKDVLLLDVTPLSLGIETLGGVFTRMIDRNTTIP
                     TKKSQTFSTADDNQNAVTIRVFQGEREMAADNKLLGQFDLVGIPPAPRGVPQIEVTFD
                     IDANGIVNVSAKDKGTGKEQQIRIQASGGLSDDDIDKMVKEAEQFAEEDKKRRAGAEA
                     RNQAESLIHSTEKQLAEHGDKVSAEVKSEIEAALAEAKTAVEGGDPEAMTAKTNALAQ
                     SAMKLGQAMYEAEQAQNATASSEGGEGATEAEAKPADEEVVDAEFSEVDDEKKA"
BASE COUNT          239 a          625 c          563 g          340 t
ORIGIN      
        1 accccggcgg gaatgtcgac gctcatcgcc cggcggcgga ccgcgcggcc ctcgccctcg
       61 cacgccgggc acgggtcggc gagcgtctgg cccgagccga ggcagttcgg gcaagtccgc
      121 tcgaccacga aaaagccctg gttggcgcgg accttgccgg cgccgccgca cgattggcag
      181 cgttcggctc gcgcttccgc gcgcgcgccg cggccatggc acggctcgca ttgggcgagg
      241 gcctggatcg tgatttcctt gttggcgccg gcgaatgcct cctcgagcgt cagctcgagg
      301 tcgtagcgca ggtcggagcc gcgcccggca ttctggcgct gcccgcgcgg gtccatgaac
      361 tcgccaaaga tcgacgagaa gatgtccgaa aagccctcga acccggccac accgaacggg
      421 tcgccgccgt tggcgccctg gcgaaacgcg gcatggccga agcggtcgta ggcggcacgc
      481 ttctgcgggt ccttgaggca atcatacgct tcgctgatcg ccttgaagcg cgcctcattg
      541 tccttgcagc cgccggtgcg gtcgggatgg cattccatcg ccagccggcg gtaggccgac
      601 ttgatcgccg acgcatcggc gtcgcgcggt acgccgagca ggctgtaata gtcttcgtgg
      661 accacgctta cgtcaccctg agtccgactg gcctgagccc gtcgaaggcc tgtccttttc
      721 gaaggaacga cagtccttcg acaagctcag gacgaacggc attgggcaat gccgttacgc
      781 cttcttctcg tcgtcgacct cggagaattc ggcgtcgacc acttcctcgt cggccggctt
      841 ggcctcggct tcggttgcgc cttcgccgcc ctcgctcgac gcggtcgcat tctgcgcctg
      901 ctcggcctcg tacatcgcct ggccgagctt catcgccgac tgggcaagag cgttggtctt
      961 ggcggtcatc gcctcgggat cgccgccctc gaccgcggtc ttggcctcgg ccagcgccgc
     1021 ctcgatttcc gacttcactt cggccgaaac cttgtcgcca tgctcggcca gctgcttctc
     1081 ggtcgagtga atgaggctct cggcctggtt cctggcctcc gccccggcgc ggcgcttctt
     1141 gtcctcctcg gcgaactgct cggcttcctt gaccatcttg tcgatgtcgt cgtcggaaag
     1201 gccgcccgac gcctggatcc ggatctgctg ctccttgccc gttcccttgt ccttggccga
     1261 gacgttgacg atgccgttgg cgtcgatgtc gaaggtgacc tcgatctgcg gcacgccgcg
     1321 cggcgccggc gggatcccga ccaggtcgaa ctggccgaga agcttgttgt ccgcggccat
     1381 ctcgcgctcg ccctggaaga cccggatcgt aaccgcgttc tggttgtcgt cggcggtcga
     1441 gaaggtctgg ctcttcttgg tcgggatggt cgtgttgcgg tcgatcatcc gcgtgaacac
     1501 cccgcccaag gtctcgatgc cgaggctcag cggcgtgacg tcgagcagca acacgtcctt
     1561 gacgtcgccc tggagcacgc cggcctggat cgccgcgccc atcgccacga cctcgtccgg
     1621 attgacaccg acatgcggct ccttgccgaa gaattccttc acccgctcgc gcacgcgcgg
     1681 catgcgggtc atgccgccga cgagaacgac atcggcgatg tccttcgcct cgaggcccgc
     1741 gtccttcagc gccttcttgc acggctc
//
LOCUS       DATAIQ010000192         3428 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_378826, whole genome shotgun sequence.
ACCESSION   DATAIQ010000192 DATAIQ010000000
VERSION     DATAIQ010000192.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3428)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3428)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3428
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_378826"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1306)
                     /locus_tag="VHN20_03325"
     CDS             complement(<1..1306)
                     /locus_tag="VHN20_03325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018388345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HEX2724834.1"
                     /translation="MDDFAQALRMLVTTPIVPAAMAGLVWGIIGGALPGISASITMAL
                     ILPLTFTLDPVSAIVLLAATYIGAEYGGSIPAILIRTPGTNSAAATVIDGYEMKRQGR
                     AGEALGISLWSGIVGSLFGLAMLILMTEPLSRIALAFKPTSYCALGVLGLSIIASLSE
                     RSLLKGLAAAVVGMMIATIGTDPISGVSRYTFGLPELLAGVKPILVMIGLFAVSELLR
                     QSGAPALAAATEVVRVRLPGLATMRKIGKAQGIGCIVGTMEGLMPGGGGSIAAFFSYN
                     EAKRWSRYREEFGKGSVEGVAAPEAANNTVASTALIPLLSFGIPGSNSAAVLLGGLLI
                     HGLLPGPRLFEKNGDVILGLYAGSFVAIVAQLIVGIMILPVCMWLVNRPRPYLAGFIL
                     AFVMAGIFSINSSLWDIGFVLAVGFVGYLMRFAGFPFLPAVLG"
     gene            complement(1316..1786)
                     /locus_tag="VHN20_03330"
     CDS             complement(1316..1786)
                     /locus_tag="VHN20_03330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018388344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter TctB
                     family protein"
                     /protein_id="HEX2724835.1"
                     /translation="MINKDVASGIILLVVAALYYAATLQIPESSLSDEVGAQGMPLIL
                     AILLALLAVLITARGLILARRPVPAAAAQTDDEEEAPPRRALGFLAIAAGYVIVAPLV
                     GFAPALALLIAAIAIYEGALPSWRTALVAVAGALGFWLLFVRLLGVEQPQSLFF"
     gene            complement(1842..2804)
                     /locus_tag="VHN20_03335"
     CDS             complement(1842..2804)
                     /locus_tag="VHN20_03335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007753519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEX2724836.1"
                     /translation="MLRITVAALTGLVALAGASSDQVRAEPAAYPHQVVTLVTHSSPG
                     GGSDVFLREMSKHLGKYIKATFVVENVQGGSGARAMSRLATAKPDGSIFYATTPTYIY
                     TSLMSKPANTFRDLEPLANFFTDAEVIYTRADGPFQNLKDVIAHAKEKRGRWGVANPA
                     SLERQAAERLKHVSGVQAAVVSHEGGGDMMINVLNGTLDIGVGEIQEIRSQLEGKKVR
                     ILATFNAERLPDFPQVPTVKESGFDVVLNKFRGLAGPKGLPADVVAAWEKAIPQLLAD
                     PDYKKVYGAESLVPNFIPHDAYAKFVNDFANASETFLKETGAVK"
     gene            2980..>3428
                     /locus_tag="VHN20_03340"
     CDS             2980..>3428
                     /locus_tag="VHN20_03340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015928055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HEX2724837.1"
                     /translation="MDASTVDRAKVTQVLADFAVRSAPGDVPAPVYKEAVRSFLNWTG
                     CAVGGSIHPTIDNALAAIRPFAGPGQASVLGRGDKLDLLHAALVNGISSHVFDFDDTH
                     LKTIIHPAGPIASALLPLAETRQMSGRDFLHAFILGVEVECRIGNAV"
BASE COUNT          627 a         1129 c         1140 g          532 t
ORIGIN      
        1 cgccgagcac cgccggcagg aacggaaacc cggcgaagcg catcaggtaa ccgacgaagc
       61 cgaccgccag gacgaagccg atatcccaaa ggctgctgtt gatcgaaaaa atgccggcca
      121 tgacgaaggc gaggatgaag ccagcgagat acggccgcgg gcggttaacg agccacatgc
      181 agaccggcag gatcatgatg ccgacgatga gctgggcgac gatggccacg aaagagccgg
      241 catagagacc gaggatcacg tcgccgttct tctcaaacag gcgcggcccc ggcaacaggc
      301 cgtggatcaa caagcccccc agcagcacgg ccgccgagtt cgatccggga atgccgaaac
      361 tcagcaaagg gatcagcgcc gtgctggcga ccgtgttgtt ggccgcttcc ggcgccgcga
      421 cgccctcgac cgaccccttg ccgaactcct cgcgatatcg cgaccaacgc ttggcctcgt
      481 tgtaggagaa gaaggcggcg atggacccgc cgccgccggg catcagccct tccatggtgc
      541 cgacgatgca gccgatgccc tgggccttgc cgatcttgcg catggtcgca aggcccggca
      601 ggcgaacgcg caccacctcc gtggcggccg cgagcgccgg tgctcccgac tggcgcagca
      661 gctcgctcac ggcgaacagc ccgatcatca cgaggatcgg cttcacgccc gccagaagct
      721 ccggcaatcc gaaggtgtag cggctcacgc cggagatcgg atccgtaccg atggtcgcta
      781 tcatcatgcc gacgacggcg gcggcgagac ctttcagcag cgagcgctcg gacagcgagg
      841 caatgatgct gagcccaagc acgccgagcg cacaatagga ggtcggcttg aaggcgagcg
      901 cgatgcgcga caacggctca gtcatcagga tcagcatcgc cagcccgaac aggctgccga
      961 cgatgccgga ccaaagcgaa atgccgagcg cctcgccggc gcgcccctgg cgcttcatct
     1021 cgtagccgtc gatcaccgtg gcggcggccg agttggtgcc gggcgtgcgg atcagaatgg
     1081 cggggatcga gccgccatat tcggcgccga tataagtcgc ggcgagcagc acaatcgccg
     1141 acaccggatc gagcgtgaag gtcaacggca ggattagcgc catcgtgatc gacgccgaga
     1201 tgccgggtag cgcgccgccg atgatgcccc agaccagccc ggccatggcc gccggcacga
     1261 tgggcgtcgt gaccagcatt ctcaacgcct gggcgaagtc gtccatgggt ggctttcaga
     1321 agaacagcga ttgcggctgc tcgacgccaa gcagccgaac gaacaacaac cagaaaccga
     1381 gcgcgccggc gacggcgacg agggccgtgc gccaggacgg cagcgcgcct tcgtagatgg
     1441 cgatggccgc gatcagcaac gcgagcgctg gagcaaagcc gaccagcggc gccacgatca
     1501 cgtagccggc ggcgattgcc aggaagccga gcgcacgccg aggcggcgcc tcctcctcgt
     1561 cgtccgtctg agccgccgcc gcgggcaccg gcctgcgcgc caggatcagg ccgcgggccg
     1621 tgatcagcac ggccagaagc gcgagcagga tcgcgagaat cagcggcatg ccctgggcgc
     1681 cgacctcgtc ggagaggctg ctctcgggaa tctgcagcgt ggccgcataa tagagcgcgg
     1741 ccacgacgag caggatgatc ccgctggcga cgtccttgtt gatcacggac aagcttccgg
     1801 agcggtgtgc gtgagcgccg cgtcatgcac ctcgcgacgc gtcacttcac ggcgcccgtt
     1861 tccttgagga aggtctcgga cgcgttggca aagtcgttga cgaacttcgc gtaggcgtcg
     1921 tgcgggatga agttcggcac gaggctctcg gcgccgtaga ccttcttgta atccggatcg
     1981 gcgagaagct gcgggatcgc cttctcccag gccgcgacca cgtccgccgg caggcctttc
     2041 gggcccgcaa ggccgcggaa cttgttgagg accacgtcga agcccgactc cttgaccgtc
     2101 ggcacctgcg ggaaatcggg caaacgctcg gcattgaagg tggccaggat gcgcaccttc
     2161 ttgccttcga gctgcgagcg gatctcctgg atctcgccga cgccgatgtc gagcgtgccg
     2221 ttgagcacgt tgatcatcat gtcgccgcca ccttcgtgcg agacgaccgc cgcctgcacg
     2281 ccgctgacat gcttgaggcg ctccgccgcc tggcgctcca gcgaggccgg attggcgacg
     2341 ccccagcggc cgcgtttctc cttggcgtga gcgatcacgt ccttaaggtt ctggaacggg
     2401 ccatcggcgc gggtgtagat cacctccgca tcggtgaaaa agttggcgag cggctcgaga
     2461 tcccggaacg tgttcgcggg cttgctcatc agcgacgtgt agatgtaggt cggcgtggtc
     2521 gcgtagaaga tgctgccgtc cggcttcgcg gtggcgaggc gcgacatggc ccgggcgccg
     2581 ctgccgccct gcacgttctc gacgacgaag gtcgccttga tgtatttgcc gaggtgcttt
     2641 gacatctcgc gcaggaacac gtcactgccg ccgcccgggc tcgaatgcgt gaccagggtc
     2701 acgacctggt ggggataggc ggcgggctcg gcgcggactt gatcggaaga cgcgcccgcg
     2761 agcgcgacca ggccggtcag tgcggccaca gttatcctga gcatcaataa tcctccctga
     2821 gtattttttt tctcgccgcc tttgttcagg ggccggtcag gattgtcaat cggacggcca
     2881 ggcagtccct ggttcttcgt tacaccgcga gaccggcggg tcgttgacaa tggtgtgacc
     2941 ggacgccatg agcccttgat gccccaggga ggaacaaaga tggacgcctc gacggtcgat
     3001 cgggccaagg ttacgcaggt tctcgccgat ttcgcggtcc ggtccgcccc cggggatgtc
     3061 cctgcccccg tctataagga agcagtccgt tcgttcctca actggaccgg gtgcgcggtg
     3121 ggcggctcca tccaccccac catcgacaac gcgctcgctg ccatcaggcc cttcgcaggg
     3181 cccggccagg cgagcgtgct cgggcgcggc gacaagctcg acctgctgca cgccgcgctg
     3241 gtcaacggca tctcctcgca tgtgttcgat ttcgacgaca cgcatctgaa gaccatcatt
     3301 catccggccg gcccgatcgc atcggcgctg ctgcccctgg ccgagacgcg ccagatgagc
     3361 gggcgcgact tcctgcacgc cttcatcctc ggcgtcgagg tcgagtgccg gatcggcaac
     3421 gcggtgta
//
LOCUS       DATAIQ010000193         6817 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_50530, whole genome shotgun sequence.
ACCESSION   DATAIQ010000193 DATAIQ010000000
VERSION     DATAIQ010000193.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 6817)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6817)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6817
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_50530"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..147)
                     /locus_tag="VHN20_03345"
     CDS             complement(<1..147)
                     /locus_tag="VHN20_03345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012453187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX2724838.1"
                     /translation="MKFVYFTHSLASCWNHGNAHFLRGVLRELVHRGHEVIAYEPASS
                     WSLHN"
     gene            complement(144..1247)
                     /locus_tag="VHN20_03350"
     CDS             complement(144..1247)
                     /locus_tag="VHN20_03350"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012778968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEX2724839.1"
                     /translation="MTADAVGGVWQYALDLARGLADHEVETTLAVLGPAPAQDQMAAA
                     SSVPGLRLVPTGLPLDWTAATPVEVAGAGAAIAALAEDAAPDIVHLNSAALAAGARFP
                     AQLVIACHSCVATWWNTVHDEPLPEDFMWRVKLVQQGYVAADALIAPTAAFATTTART
                     YGLKTPPTVVHNGRRVAVDRPCRPTFSSSFAFTAGRLWDEGKNLAAIDRAAARLAMPV
                     LAAGPLAGPNGAEISLQHVRTLGRLSDDEVSRWLKPAPVFVSAAVYEPFGLAVLEAAQ
                     ACCPLVLSDIPSFRELWDGAALFVPPDDDLAIAAAIERIVGDSALRAELGVAARERSC
                     RYSVEAMAAGMAAIYRWLSPDAAASASYEKAIA"
     gene            complement(1390..2499)
                     /locus_tag="VHN20_03355"
     CDS             complement(1390..2499)
                     /locus_tag="VHN20_03355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX2724840.1"
                     /translation="MTAGDVARTPAIIGRRQILITGGAGFIGSNLADRLAREGHDVLV
                     YDALARSGVDTNLAWLKKRHPQRVSGVIGDVRDETAVAEASADATAVFHFAAQVAVTT
                     SLVEPRADFDVNVRGTLNLLDALRRRREPVPLLFASTNKVYGDLADVPLEASNDAYVP
                     RDANVRASGISEDRCLAFHTPYGCSKGAADQYVLDYARSFGVPTCVMRMSCIYGPRQM
                     GTEDQGWVAHFVIRALQGEPISIYGDGRQVRDIMDVSDALDAYIAAWRRIDAVRGRAF
                     NLGGGPANAVSLRQLLRHIESLLGRPVELSFSDWRAGDQRYYVSDTTRARRDLGLRQA
                     IPWRTGVAALAHWLADARGLDALSEAKLKTAGALT"
     gene            complement(2496..3611)
                     /locus_tag="VHN20_03360"
     CDS             complement(2496..3611)
                     /locus_tag="VHN20_03360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX2724841.1"
                     /translation="MADTILITGGAGFIGRYVAQAILQKGHRVRVLDSLIEQVHGNRA
                     RADGISADVDIVVGDVRDETALLKALKGVDKVVHLAAEVGVGQSMYAVDRYVSVNDYG
                     TAALFQQLIDNPVKRVVVASSMSIYGEGLYRSAEGAVAEDIVRRSRTGSGAPWDPLDA
                     QGRPLIPVPTPEWKRPTLASVYALTKYVQERLTLTVAPAYAMEGVALRLWNVYGPGQA
                     LSNPYTGVLAIFSSRIHNGQPPMIFEDGHQRRDFVHVEDVAQAFVLALEHPDAAGEVY
                     NIGSGEDRSVRDVAALLADAMNRRDLDPEITGKARIGDIRHCIADIGKARTELGFAPR
                     RNFSEGLAELAEWVAKQQAEDRVQEARKELEMRGLVA"
     gene            4428..5519
                     /locus_tag="VHN20_03365"
     CDS             4428..5519
                     /locus_tag="VHN20_03365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015319154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol-3-phosphate synthase"
                     /protein_id="HEX2724842.1"
                     /translation="MSPRTIRVGIVGVGNCASSFVQGLSYYRDAGANEPVPGLMNVEL
                     GGYHVVDVEIASAFDVSAAKVGRDVAEAILAPPNNTHRFADVPPTGVVVRRGRTLDGI
                     GKYLREEISESDRPEDDVTDILQASRTDVVVSYLPVGSQRATEWYAERALEAGCAFVN
                     CIPVFIASNPEWRKRFEERGLPLIGDDIKSQVGATIVHRVLANLFRERGVRLDRTYQL
                     NFGGNSDFQNMLERERLESKKISKTQAVTSQLDVPLAGQDIHVGPSDYVPWLSDRKWA
                     YIRMEGTTFGGVPLNVELKLEVWDSPNSAGVVIDAVRCAGLARDRGMGGALIGPSSYF
                     MKSPPQQFTDSEARERTLCFINGEDGASH"
     gene            5528..6124
                     /locus_tag="VHN20_03370"
     CDS             5528..6124
                     /locus_tag="VHN20_03370"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012331986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HEX2724843.1"
                     /translation="MTTICFLVRHAAHELVDRVLCGRMPGVRLGAEGWEQARRAAARL
                     ARERVAAIHASPLERARETAECIGECLRLRPEICEAINEIDVGEWSGRTFDALREDLR
                     WSSWNEARSMARPPDGETMLEVQARVVRHLEEVRSRYPEQNVVLVSHSDVIKAALLYC
                     LGMPLDGYRLLDISPASISAVAIGEWGAKLLSMNEVPA"
     gene            6121..>6817
                     /locus_tag="VHN20_03375"
     CDS             6121..>6817
                     /locus_tag="VHN20_03375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007613067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX2724844.1"
                     /translation="MRIVVFGLTISSSWGNGHATLWRGLCRALASDGHVVVFYEKDVP
                     YYAGNRDLAAVPGGELVLYSDWQAVRQRAARDVRHGDVAIVTSYCPDGIAATELVAEH
                     ALGRRVFYDLDTPVTLSRLSRGETTTYIGPRGMRDFDLVLSYTGGAALERLKGDLGAR
                     QVAPLYGHVDPEVHRPVAPVARYASDMSYLGTYAADRQAALEALFLAPARRRTGQRFL
                     IGGAQYPQDFPWTP"
BASE COUNT         1159 a         2210 c         2285 g         1163 t
ORIGIN      
        1 gttgtgcaga ctccaggatg acgcaggttc ataggcaatg acctcgtgcc cgcgatgcac
       61 cagctcgcgc aggacgccgc gcaggaaatg ggcgttgccg tggttccagc atgatgccag
      121 cgagtgcgtg aagtagacga acttcatgcg atggccttct catacgatgc cgatgcggct
      181 gcgtctgggg aaagccagcg gtagatggcg gccatgccgg ctgccattgc ctcgaccgag
      241 tagcggcacg agcgctcgcg cgccgctacg ccaagctcgg cgcgcaaggc gctgtcgccg
      301 acgatccgct cgatcgcggc ggcaatcgcg aggtcatcgt cgggcggcac gaacagcgcc
      361 gcgccgtccc aaagctcgcg gaagctcggg atgtccgaca ggaccagcgg gcagcaggcc
      421 tgcgcggcct ccagaacggc gagtccgaac ggctcgtaaa cggccgccga gacgaagacc
      481 ggcgcgggtt tcagccaccg ggaaacctcg tcgtcgctca atcgccccag cgtcctgaca
      541 tgttgcaagc tgatctcggc cccgttcggc cctgcaagag gacctgcggc caggactggc
      601 atcgcaagcc gcgcggcggc gcggtcgatg gcggcgagat tcttaccctc gtcccagagc
      661 cggccggccg tgaaagcgaa agaggacgag aaggtcggtc ggcacgggcg atcgacggcc
      721 acgcggcggc cgttgtgaac gacggttgga ggggtcttga gaccataggt gcgcgccgtg
      781 gtcgtggcga aagcggccgt cggagcgatc aatgcatcgg cagcgacgta gccctgctgc
      841 accagcttca cgcgccacat gaagtcttcc ggcagcggct cgtcgtgcac cgtgttccac
      901 cacgtggcga cgcaggaatg gcaggcgatc acgagctggg cgggaaagcg agcgccggcg
      961 gccagggccg cgctgttgag atggacgatg tcgggcgcgg cgtcttccgc cagtgccgcg
     1021 atcgcggcgc ctgcaccggc gacctccacc ggcgtcgcgg cggtccagtc cagcggcagt
     1081 ccggtcggca ccagccgcag accgggaacg gagcttgccg cggccatctg atcctgagcg
     1141 ggcgcaggcc cgaggacagc gagcgtggtt tcaacctcat gatcggcgag cccgcgtgcg
     1201 agatcgagcg cgtattgcca gaccccgccg acggcgtcgg ccgtcatgaa caggcggagc
     1261 ttccgtcgcg actctaccga taccaacacg cgtcctccga cctgttgcac acatcgcaag
     1321 gcgcaagccg aacgcggcca cgcggcgcca cgcgatccgc gcaagggcgc gccgggattt
     1381 cggacgcgct catgtcaagg ctcctgcggt cttgagcttc gcctcgctaa gggcgtcgag
     1441 gccgcgcgcg tcggcaagcc aatgggcgag ggcggcgacg ccggtgcgcc acggaatggc
     1501 ctgccgcaac ccgaggtcgc gtctcgcccg cgtcgtgtcg gacacgtagt agcgctggtc
     1561 gcctgcacgc caatccgaga aggaaagctc gaccggccgg ccgagcaggg attcgatatg
     1621 gcgcaacagc tggcgcaggc tcacggcgtt agcggggccg ccgccgaggt tgaaggcacg
     1681 gccccggact gcatcgatgc gccgccatgc agcgatatag gcgtcgagcg cgtcgctcac
     1741 gtccatgata tcgcgcacct gccggccgtc gccgtagatg ctgatcggct cgccctgcag
     1801 ggcccgaatg acgaaatgcg ccacccagcc ctgatcctcg gtgcccatct ggcgcgggcc
     1861 gtagatgcag ctcatgcgca tcacgcaggt cggcacgccg aagctgcggg cgtagtcgag
     1921 gacgtattga tcggccgcgc ctttcgagca gccatagggc gtgtgaaaag cgaggcagcg
     1981 atcctcgctg atgccgctgg cccgcacgtt ggcgtcacgt ggcacgtaag cgtcgttgct
     2041 ggcctcgagc ggcacgtcgg cgagatcgcc atagaccttg ttggtgctcg cgaataaaag
     2101 tggtaccggc tcgcggcgac ggcgcaaggc gtcgagaagg ttcagcgtgc cgcgcacatt
     2161 gacgtcgaag tcggcgcgcg gctcgacgag gctcgtcgtc accgccactt gcgcggcgaa
     2221 gtgaaacacc gcggtcgcgt cggcgctcgc ctcggcgacg gcagtctcgt cgcggacgtc
     2281 gccgataacg cccgaaacac gctgcgggtg ccgcttcttg agccaggcaa ggttggtgtc
     2341 gacgcccgac cgggcgagcg cgtcgtagac gagcacgtca tgcccttcgc gggcgagccg
     2401 atcggccagg ttggagccga tgaatccggc gccgccggtg atcaggatct ggcgcctgcc
     2461 gatgattgca ggcgtgcgcg ccacatctcc cgccgtcatg ccacgaggcc tcgcatctcg
     2521 agttccttgc gcgcctcctg gacgcgatcc tcggcctgct gcttcgccac ccattcggcc
     2581 agctccgcaa gaccttccga gaaattccgc cgcggtgcga agccgagctc ggtccgcgcc
     2641 ttgccgatat cggcgatgca atgacggatg tcgccgatgc gggccttgcc cgtgatctcc
     2701 gggtccaggt cgcgccggtt catggcgtcc gcgaggaggg ccgcgacgtc gcgtaccgac
     2761 cggtcctcac cgctgccgat gttgtagacc tcgccggcgg catccggatg ctcgagcgcc
     2821 aggacgaacg cttgcgcgac gtcctcgaca tgcacgaagt cgcggcgctg atggccgtcc
     2881 tcgaagatca tcggaggttg gccgttgtga atgcgcgacg aaaagatcgc gagaacgcct
     2941 gtgtaggggt tggagagcgc ctggcccggg ccatagacgt tccacagccg caaggcgacg
     3001 ccttccatgg cgtaggcggg cgccaccgtc agcgtgagcc gctcctgaac atatttcgta
     3061 agcgcgtaaa ccgaggcgag ggtcgggcgc ttccattccg gcgtcggcac ggggatcagc
     3121 ggccggcctt gcgcgtcgag cggatcccac ggagccccgc tgccggtgcg agaccggcgc
     3181 acaatgtcct cggcgacagc tccctcggcg ctgcggtaaa ggccttcgcc gtagatgctc
     3241 atcgacgatg cgaccacaac ccgcttcacg ggattgtcga tcagctgctg gaacagcgcc
     3301 gcggtaccat aatcgttgac cgacacgtag cggtcgaccg catacatgct ttggccgacg
     3361 ccgacttccg cagcgagatg tacgaccttg tcgacgccct tcagcgcctt gagcagcgcc
     3421 gtctcatcgc gcacgtcgcc gacgacgata tcgacatctg cagaaatccc gtccgcacgc
     3481 gcgcggttgc cgtggacctg ctcgatgagg ctgtcgagca cgcgaacacg atgtcccttc
     3541 tgcaggatag cctgcgcaac gtagcgaccg atgaatccgg cgccgcccgt gatgaggatc
     3601 gtgtctgcca aggctaatct ccagacgggg taatgctgcg atatgacaaa cgcgggactt
     3661 gcggctgtcg acgttcgaga aatgctgcgc ttgtcgttcg gatcgttgcc gcacaatccg
     3721 gaagtctgac gtttgtactg ctgctttacg tcttcgtgcc tcgctgtcgt ttgcgctcgc
     3781 gcccgcctcg atgttcggcg tcagcttggc cggtcctgca aacgttcaaa ccttcatcta
     3841 tgttccatag tctcacgtcg cacgcgttcg attcacatac gttaaagcgc gcgcaggatt
     3901 cgcgacgccg acaatcgccc acgtatgcaa ttgcaattcc tgtgcgattt ttcatggcgc
     3961 acgtgcgcgg cgttgcgcgc gcagcaagat gtgaaactcg caggaggccc ggcgtcacga
     4021 ttcacatacg ttaagtcatg cgtcacgcgt catgatggtg cgcagcagaa ttcttcaacg
     4081 aaatacgatg cggcatgacc gttcgattca cttacgttaa ttcgcgcgca agccttttga
     4141 ggtcggatgc gcgcgctggg tgtgaatgtg tgatgtgagc gagcacgtgc gattgatgat
     4201 gctcaacacg tggtcgatga aagtcgcgga cgtgtgctcg gtgcggcgtc gccaggacaa
     4261 atgcctcgcg gcctcgcgcg caaatgtcgc gcgtgctctg cgcgacgcgt gatgtctgga
     4321 acttgccctg aagcttgggg tttagctgcc aatcgaacta catacgttcg ccatgagctt
     4381 gacgctgctc tgagcccccg atccctcaaa actgaatcga ggttgccgtg agcccgagaa
     4441 ccatccgtgt cggcatcgtc ggcgtcggca attgcgcttc ctccttcgtg caggggctct
     4501 cgtactaccg ggatgccggt gccaacgagc ccgtgccggg tctcatgaat gtcgagcttg
     4561 gcggctacca cgtcgttgac gtcgagatcg cctcggcctt cgacgtcagc gccgcgaaag
     4621 tcggacgtga cgttgccgag gcgatcttgg cgccgcccaa caacacgcat cgcttcgccg
     4681 acgtgcctcc caccggtgtc gtcgtccggc gcggcaggac gctcgatggc atcggcaagt
     4741 atctgcgcga ggagatcagc gagtcggata ggccggaaga cgatgtcact gacatcctgc
     4801 aggcatcgcg aacggacgtc gtggtttcat atctgccggt cggctcgcag cgcgcaacgg
     4861 agtggtacgc cgagcgggcg ctcgaagccg ggtgtgcgtt cgtcaactgc attccggtgt
     4921 tcatcgcgtc caatccggag tggcgcaagc ggttcgagga gaggggcctg cccctcatcg
     4981 gggacgacat caagagtcag gtcggagcga cgatcgtgca tcgcgtgctc gccaacctgt
     5041 tccgtgagcg cggcgtgcgt ctcgatcgca cctaccagct taatttcggc ggcaactccg
     5101 atttccagaa catgctcgaa cgcgagcgcc tggaatcgaa gaagatttcc aagacacagg
     5161 cggtgacgag ccagctcgac gtgccgctcg ccggacagga tattcacgtc gggcccagcg
     5221 attacgtgcc gtggctcagt gaccgcaaat gggcttatat ccgcatggag ggcacgacct
     5281 tcggcggcgt tccgctcaac gtggagctca agctcgaggt atgggattca ccgaattcgg
     5341 caggcgtcgt aatcgacgcc gtccggtgcg ccgggctcgc ccgcgaccgc ggcatgggcg
     5401 gcgcgctgat cggtccgtcc agctacttca tgaaatctcc gccgcagcag ttcaccgaca
     5461 gcgaagcgcg cgagcgcacg ctgtgcttca tcaatggcga ggacggcgcc agccactgag
     5521 cgtgaccgtg acaacgatct gtttcctcgt gcgccacgcc gcccatgagc tcgtggaccg
     5581 ggtcctgtgc ggccgcatgc ccggcgtcag gctgggcgcg gagggatggg agcaggcgcg
     5641 gcgtgccgcc gctcgcctcg cgcgcgagcg cgtggccgcg atccatgcga gcccgctcga
     5701 acgcgccagg gaaacggccg aatgcatcgg cgagtgcctg cggctgcgcc ccgagatctg
     5761 cgaggctatc aacgagatcg acgtcgggga gtggtcgggc cgcacgttcg acgcgttgcg
     5821 cgaggatctg cgctggtcat cctggaacga ggctcgcagc atggcgcggc cgccggacgg
     5881 cgagaccatg ctcgaagtcc aggcccgggt tgtccgacac ctcgaagagg tgcgctcccg
     5941 gtatccggag cagaacgtgg tcctggtgag ccactccgac gtgatcaagg cggcgctgct
     6001 ctactgcctc gggatgcctc tggacggcta tcggctgctc gacatcagcc cggcctcgat
     6061 cagcgccgtc gccatcggcg agtggggagc caagctcctg tccatgaacg aggttccggc
     6121 atgagaatcg tcgtgttcgg gctcaccatc agctcgtcat ggggcaacgg gcacgcgacg
     6181 ttgtggcggg gcctgtgccg ggcgctggcg agcgacggcc acgtggtcgt cttctacgag
     6241 aaggacgtgc cgtattacgc gggcaaccgc gacctcgctg cggtgccggg aggcgagctg
     6301 gtcctctatt ccgattggca ggcggtgcgc cagcgcgcgg cccgggacgt ccgccacggc
     6361 gacgtcgcca tcgtcacgtc atactgccct gacgggatcg cagcgaccga gctggtggcg
     6421 gaacacgcgc tcggccggcg tgtgttctac gacctcgaca cgccggtcac gttatcgcgg
     6481 ttgagccgtg gcgagacgac gacctatatc ggcccgcgcg ggatgcgcga tttcgatctc
     6541 gtgctcagct ataccggcgg cgctgcgctc gagcggctca agggcgatct cggcgcgagg
     6601 caggtggcgc cgctctacgg ccatgtcgac ccggaggtgc atagaccggt cgcgcccgtc
     6661 gcgcgctatg cctccgatat gtcctatctc ggcacctacg ccgccgatcg ccaggccgcc
     6721 ctcgaggcgc ttttcctcgc gccagcccgc cggcgcacgg gacagcggtt cctgatcggc
     6781 ggcgcgcaat atccgcagga ttttccgtgg acgccga
//
LOCUS       DATAIQ010000194         3578 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_425092, whole genome shotgun sequence.
ACCESSION   DATAIQ010000194 DATAIQ010000000
VERSION     DATAIQ010000194.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3578)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3578)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3578
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_425092"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            100..696
                     /locus_tag="VHN20_03380"
                     /pseudo
     CDS             100..696
                     /locus_tag="VHN20_03380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018458172.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxylmethyltransferase
                     family protein"
     gene            complement(756..2435)
                     /locus_tag="VHN20_03385"
     CDS             complement(756..2435)
                     /locus_tag="VHN20_03385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HEX2724845.1"
                     /translation="MGASKVYEVLADAFAREGAEVLFTLMGDGNMHWVARLSAHDGFR
                     TYYVRHEHCAAAMASAYARATGKVGVASVTCGPGVTQLSTALATAAQAGIPLVVFAGE
                     SPLHLSWYNQHIDQGPLVTATGAHYIAAHSLPRLLEQVRDAFFIARTEQRPVVIGVPY
                     DLQKQTLEPASPYIPSTAFIPDTGRMVPNPDFVDRASDMIAAARRVIVIAGRGAKLSG
                     AEAACRQLAELVDGLLATTLPVRGLFDADPFSLGVAGGFSSDVAREKFAECDLVVAVG
                     ASLTQFTTDGGKLYPGARVIQIDPEPRGIRHARKAADLYLRADAKAGLEAVIDALRAR
                     ARSRPAQWRTPELARRIAEEPSDSTRFEPQPGMLDPRAAITALNRVIPRDWEIVNSSG
                     HCSYFSAQMRGRDAERFLAIREFGAIGNGLSYAVGMAAAKPDKTVVLIDGDGSFYMHA
                     QELETVRRHGLRILICILNDGAFGSEVHKLRADGVDDAGSTFGRGNLADVARGFGLRG
                     ATVTSVEQFPGLLDGFARNAGAELWDIHISDRVTSPVMRRAIQAKAAAKSA"
     gene            2572..>3578
                     /locus_tag="VHN20_03390"
     CDS             2572..>3578
                     /locus_tag="VHN20_03390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="tricarboxylate transporter"
                     /protein_id="HEX2724846.1"
                     /translation="MRRMLCLALHLALLGAAAVSGNASAADFAGKRIEWIIPFPEAGG
                     TDVWARFFVEPLSRELPGKPTILIRNVPGGGSTTGANQFAQRAKPDGLMLLGTSASTQ
                     FPYLLDDPRVKYDYKDWTPLLASPTGGVVYVRSDFGIKGVAEIKKILDQPMKFGSQGA
                     VSLDIVPLLAFEMLGMKVEPVFGLSRGQARLAFERAEAGIDFQTTPAYVKQVMPLVEQ
                     GKAVPLFSFGILDSNGDLQRDPSFRDMPHFGEVYESVHGRKPAGPAFEAYKSFLQAGF
                     GAQKALFVPKDTPRDVVDAYTKAIERLLNNAEFRKTVDEELGDYEQYTGEKSKVLVRQ
                     AT"
BASE COUNT          568 a         1220 c         1230 g          560 t
ORIGIN      
        1 aatgcaaagc accgccagcg acaacgcaga tatgccaatc atcctgttca tgatgttcca
       61 aagccttccg gcggggaaga tccgccgctt ccccgcgggc tcttcgccgt gcagcacagc
      121 gtcatggccc ggccggcgtt caagcgtctg tggacccgga tcgtcccggc gccggtggaa
      181 cgcagcacct acgtgctgtt cgccagcctc gccctgatcc tgctgttctg gcagtggcgg
      241 ccgattccgg cctcggtgtg gagcatcgcc aatcccgcgc tcacgatcgc cgtgtgggcg
      301 gtgttctggg gcggctgggc gctcgttctg gtgagcacgt tcctgatcag ccacttcgag
      361 ctgttcggcc tcaagcaggt ggtgttccac tgggtcggcc ggccgatgcc gcaaccggtc
      421 ttcaggacgc cgctgcttta tcggcaggtc aggcatccct tgtatctcgg cttcctgatg
      481 gccttctggg cgacgccggt gatgaccgcc gggcacctga tgttcgcaac ggtgaccacc
      541 gcttacatcc ttgtcgccat ccagctcgag gagcacgacc tcggcgaatt gttcggcgac
      601 cagtatcgca cctatcgcaa gcaggttggc atgctgatcc cgggcctcgg gtggcgcagg
      661 caacgccagg ccgagcacct ggagcccgcc gagtgacgac acgcatactg gaggcgcgcg
      721 gccgcgcgcc cctccattcg ccgcgcgccc cgtgcctatg ccgacttcgc cgctgccttc
      781 gcctggatgg ctcggcgcat gacgggcgat gtgacgcgat cggagatgtg gatgtcccac
      841 aattcggcgc ccgcgtttcg cgcaaagccg tcgagaaggc ccggaaactg ctccacggag
      901 gtcaccgtgg cgccgcgcag gccgaagccg cgtgcgacgt cggcgaggtt cccgcgcccg
      961 aacgtggacc cggcgtcgtc gacgccgtcg gcgcgcagct tgtgcacttc cgagccgaag
     1021 gcgccgtcgt tgaggatgca gatcaggatg cgcaggccat ggcggcgcac cgtctcgagc
     1081 tcctgcgcgt gcatgtagaa gctgccgtcg ccgtcgatca gcacgacggt cttgtcgggc
     1141 ttcgcggcgg ccatgcccac cgcataggac aggccgttgc cgatcgcccc gaattcgcgg
     1201 atggcgagga accgctcggc gtcgcggccg cgcatctgcg cggaaaagta ggagcagtgc
     1261 cccgagctgt tgacgatctc ccaatcccgg gggatgaccc ggttgagcgc cgtgatcgcc
     1321 gcgcgcgggt cgagcatgcc gggctgcggc tcgaagcgcg tgctgtcgga cggctcttcg
     1381 gcgatgcggc gcgcgagctc cggcgtgcgc cattgcgccg gacgtgaccg cgcccgcgcg
     1441 cgcagcgcgt cgatgaccgc ctccagcccg gccttggcat cggcgcgcag gtaaaggtcg
     1501 gcggccttgc gggcgtgccg gatgccgcgc ggctccggat cgatctggat gacgcgcgcg
     1561 cccggataga gcttgccgcc gtcggtcgtg aattgcgtca ggctggcgcc gaccgcgacg
     1621 acgaggtcgc attccgcgaa tttctcgcgc gccacgtcgg acgagaagcc gcccgccacg
     1681 ccgagcgaaa acggatcggc gtcgaacagg ccgcgcaccg ggagcgtcgt cgccagaagg
     1741 ccgtcgacca gctcggcgag ctgccgacag gccgcttccg cgccggacag ttttgcgccg
     1801 cggccggcta tgacgatgac gcggcgcgcg gcggcgatca tgtcgctcgc gcggtcgacg
     1861 aagtccggat tggggaccat gcggcccgtg tccgggatga aagccgtcga cggaatatag
     1921 ggcgaggcgg gttcgagcgt ctgcttctga agatcataag ggacgccgat gaccaccggc
     1981 cgctgctccg tgcgcgcgat gaagaaggcg tcgcgcacct gctcgagcag gcgcggcagg
     2041 ctgtgcgcgg cgatgtaatg cgcgcccgtg gcggtgacga gcggcccctg gtcgatatgc
     2101 tggttgtacc aggagaggtg cagggggctt tcgccggcga acacgaccag cggaatccct
     2161 gcctgcgccg ccgtggcgag cgccgtcgac agctgcgtca ccccggggcc gcacgtcacc
     2221 gaggcgacgc ccaccttgcc ggtcgcccgg gcgtaggccg acgccatggc ggccgcgcaa
     2281 tgctcgtggc gcacgtagta ggtcctgaac ccgtcatgcg ccgacagccg ggcgacccaa
     2341 tgcatgttgc cgtcgcccat cagcgtgaac agcacctcgg cgccctcgcg cgcaaaggcg
     2401 tccgccagaa cctcgtagac cttggatgca cccatctcgg ccgacctcgt cgtcgcgtcc
     2461 cggcgcgcat catggagacg gacgcgccca ggtcaaagcc cggcgggaag ggagggcggc
     2521 ttgcgcaaat aggcccctgc ggcaacactg gcccgaaagg gaggaacatc gatgaggcga
     2581 atgctctgcc tggcccttca tctggcgctg ctcggggcgg ccgccgtctc gggcaatgcc
     2641 tcagccgcgg atttcgccgg caagcggatc gagtggatca tcccgttccc ggaggccggc
     2701 ggcaccgacg tgtgggcgcg gttcttcgtc gagccgctca gccgcgagct tcccggaaag
     2761 ccgaccatcc tgatccgcaa cgtgcccggc ggcggctcga ccaccggcgc caaccagttc
     2821 gcgcaacgcg ccaagccgga cgggctgatg ctgctcggca catccgcgtc gacgcagttt
     2881 ccctacctgc tcgacgaccc gcgcgtgaaa tacgattaca aggactggac gccgctgctc
     2941 gcctcgccga ccggcggggt cgtgtatgtc cggtccgatt tcggcatcaa gggcgtcgcc
     3001 gagatcaaga agatcctcga ccagccgatg aagttcggca gccagggcgc cgtgtcgctc
     3061 gacatcgtgc cgctgctcgc gttcgagatg ctcggcatga aggtcgagcc ggtcttcggc
     3121 ctgagccgcg gccaggcgcg cctggcgttc gagcgcgccg aggccggcat cgatttccag
     3181 accaccccgg cctacgtgaa gcaggtcatg cccctggtcg agcagggcaa ggcggtgccg
     3241 ctgttctcgt tcggcatcct cgacagcaac ggcgacctgc agcgcgaccc gagctttcgc
     3301 gacatgccgc atttcggcga ggtctacgag agcgtccacg gcagaaagcc ggccgggccg
     3361 gccttcgagg cgtacaagag cttcctgcag gccgggttcg gcgcgcaaaa ggcgctgttc
     3421 gtgccgaagg acacgcccag ggacgtcgtc gacgcctaca cgaaggcgat cgagcggctg
     3481 ctgaacaacg ccgagttccg caagaccgtc gacgaggagc tcggcgacta cgagcaatac
     3541 acgggcgaga aatcgaaggt cctggtccgg caggccac
//
LOCUS       DATAIQ010000195         4266 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_425100, whole genome shotgun sequence.
ACCESSION   DATAIQ010000195 DATAIQ010000000
VERSION     DATAIQ010000195.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4266)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4266)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4266
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_425100"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..534)
                     /locus_tag="VHN20_03395"
     CDS             complement(<1..534)
                     /locus_tag="VHN20_03395"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX2724847.1"
                     /translation="MRRRDFIAALTGGIASPLPARAQRSAMPVIGFLNSASASGYAEF
                     TAAFHRGLAEAGFADGRNVAVEYRWADGDYRRLPALTAELVQAQVDVIVAAGPAAPLA
                     KAATTTIPIVFTAGYDPIELGLVANLKQPGGNVTGIAIMNVELGPKRLELLHELVKTE
                     TMALLINPDNPNVPGQMR"
     gene            917..2017
                     /locus_tag="VHN20_03400"
     CDS             917..2017
                     /locus_tag="VHN20_03400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007770573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2724848.1"
                     /translation="MRSERRAIEVQDLHVGYGALPVLHGIDLAVMPGEFVAILGSSGC
                     GKTTLLRTIAGFQKASRGAIRLFGQDVAALPPEKRNIAMVFQSYALWPHMTVLGNVGY
                     GLRVRGIKRDAVRRRVSEVLKLLGLSGLEDRKVTNLSGGQRQRVALGRALAIDPSLLL
                     LDEPLSNLDAKVRVQLRYEIKALQNRLGFTAIHVTHDREEAMTMADRIVVMDAGRIAQ
                     VGPPKDVYDRPASPFVASFMGADNTIDLEVSPRGTGVEIRAAPDQAPVHWQGSAPAGA
                     VRAYFRDDVARLDAPDARVDDAIVLPGRIAQRAYPGGYYRYGVAIDGRHFTVTDARYL
                     DLDTPVGLRLPLAALHLFPSANPEGGSNDNDE"
     gene            2001..3149
                     /locus_tag="VHN20_03405"
     CDS             2001..3149
                     /locus_tag="VHN20_03405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014286798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX2724849.1"
                     /translation="MTTTNRRTLIVAAVAAAAFAGPASAQQTLNVATAGDQNMVDYVK
                     DYLGPMFEKKNPGVKVNAVGTGPGDSGSQKIYEKLDAQRKGGAQKSDFDVVVIHQKAA
                     GTMVQEGLLEKYTDQIATGQLATRDTAKNALGAEVSGYVMPMFHSQTAIAYNPALVKD
                     APGSYPELMEWARKNPRKFGYNGIKGGMSGVAFVSGWVAAFGGDAAKLEKGPYDPNAK
                     AQWDKALADLKEFNKSVVITPGNAGTLDMLNRGEIAMGPVWVDMFYTWMADGKLPPNM
                     RLKLVSPGMPGQPMYYAIPAKASAKLAQDFVALATSPEVQAEGIVKRFNWYPGIDAKN
                     LEGKLDQAAWQKLFADIKPEDLSSKGKPFPIAPYFNDILEAYERKVAN"
     gene            3289..4119
                     /locus_tag="VHN20_03410"
     CDS             3289..4119
                     /locus_tag="VHN20_03410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008547589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX2724850.1"
                     /translation="MPRPSLLALTLVAPALALVAALFLYPLSYSLVAAFTADGALTLR
                     HFEKAFELYSGDIRFTLFIVVTATILIALISAAIAGVLTLSETPWLITGLRWLYRWPL
                     FIPFIVAAQCMRTFLAKNGLMNNSFVALGVLDPSQTQSLLDWRGIVITFVWKQVPFVT
                     LMLAGAMASLDRATIEAGRNLGAGRLRILVEIVLPQVAQTLLVGLVLSFVTMLSVLSV
                     PMMVAGSQPTMLTVDMAFRINAYGDYATANALGVISYAMTAIAAWIYLRHQVRREAAA
                     "
BASE COUNT          708 a         1442 c         1420 g          696 t
ORIGIN      
        1 gcgcatctgc cccggcacgt tgggattgtc cggattgatg agcagggcca tggtctccgt
       61 cttcaccagc tcgtgcaaaa gttcgagccg cttcggcccg agctcgacgt tcatgatggc
      121 gatcccagtg acgttgccgc cgggctgctt gagattggcg acgagcccga gttcgatcgg
      181 gtcatagccg gccgtgaaca cgatcgggat ggtcgtggtc gcggccttgg ccagcggcgc
      241 cgcgggtccc gccgccacga tgacatcgac ctgcgcctgc accagctcgg ccgtcagcgc
      301 cggcaggcgg cgatagtcac cgtcagccca gcggtactcg accgcgacgt tgcggccgtc
      361 cgcgaacccc gcttcggcga ggccgcggtg aaaggcagcc gtgaactccg cgtatcccga
      421 cgccgatgcg ctgttgagaa agccgatcac cggcatggcc gagcgctggg cgcgggcggg
      481 cagcggggag gcgatccctc ccgtcaacgc ggcgatgaaa tcccgccgtc tcattcgatc
      541 acctcgtcgg cgcgggtgag gagggtgggg gagcgtcagg ccggtcggta gcggccacac
      601 gatcgggccg cccggtcgcg ccaagcacag cgagagcgtc gcgccgcctg atgcgacggg
      661 tgttggcgtg ccgtcgcggc cgcgctgcct gcactctgac ccgggatgga atgacactcc
      721 tccggaccgc tgccgatgct gaccgggccg ccctggctcg gagcccggat cagcgaggct
      781 acgctagatt accgccaccc ggaagatgtg tgatgcggct cacatacgcc ccgtgaattg
      841 ggctcgcgtg acggattgag tccccatgag gtcggtgcca gactgccgcg ctgaggcggg
      901 ccacaagggg cttccagtgc gaagcgaacg acgcgccatc gaggtgcagg accttcacgt
      961 cggctacggc gcgctgccgg tgctgcatgg catcgacctc gccgtcatgc ccggcgagtt
     1021 tgtcgccatc ctcgggtcgt ccggctgcgg caagaccacg ctgctgcgca cgatcgccgg
     1081 cttccagaag gcgtcgcggg gcgccatccg tctgtttggc caggacgtcg cggcgttgcc
     1141 gcccgagaag cgcaacatcg ccatggtgtt ccagtcctac gccctgtggc cgcacatgac
     1201 cgtgctcggc aatgtcggct acgggctgcg ggtgcggggc atcaagcgcg acgcggtgcg
     1261 tcggcgggtc agcgaggtct tgaaactcct cgggctgtcc gggctcgagg atcgcaaggt
     1321 caccaacctg tcgggcgggc agcgccaacg cgtggcgctc gggcgggcgc tggccatcga
     1381 cccgtctctg ttgctcctcg atgagcccct gtcgaacctc gacgcgaagg tgcgggtgca
     1441 gctccgctat gagatcaagg cgctgcagaa ccggctcggc ttcacggcga tccacgtcac
     1501 gcacgaccgc gaggaggcca tgaccatggc tgaccgcatc gtcgtcatgg atgccggccg
     1561 catcgcccag gtcgggccgc cgaaggacgt ctacgaccgg ccggcctcgc ccttcgtggc
     1621 gagcttcatg ggcgccgaca acacgatcga cctcgaggtc agcccacgcg gcactggcgt
     1681 cgagatcagg gcggcgccgg accaggcacc ggtgcattgg cagggatcgg ctccggccgg
     1741 cgcggtgcgc gcctactttc gcgacgacgt cgcgaggctc gatgcgccgg acgcgcgcgt
     1801 cgacgacgcc atcgttctcc cgggccggat cgcgcagcgc gcctatccgg ggggttatta
     1861 tcgctacggc gtcgccatcg acgggcgtca tttcactgtg acggacgcgc gctatctcga
     1921 cctcgacacg cccgtcggcc tgcgcttgcc gctggcggcg ttgcacctgt tcccaagcgc
     1981 aaatcccgag ggaggaagca atgacaacga cgaataggag aacgctgatc gtcgccgcgg
     2041 tcgcggcggc cgcgttcgcc ggtccggcga gcgcccagca gacgctcaac gtggccacgg
     2101 ccggcgacca gaacatggtc gactatgtca aggattatct cgggccgatg ttcgagaaga
     2161 agaatccggg cgtgaaggtc aacgccgtcg gcaccggccc gggcgattcc ggttcgcaga
     2221 agatctacga gaagctcgac gcgcagagga agggcggcgc gcaaaaatcc gatttcgacg
     2281 tggtcgtcat ccaccagaag gccgccggta cgatggtgca ggaaggcctc ctcgaaaaat
     2341 acaccgacca gatcgcgacc gggcaactcg ccacgcgcga cactgccaag aacgcgctcg
     2401 gcgccgaggt gtccggctac gtcatgccga tgttccactc gcagacggca atcgcctaca
     2461 accccgccct cgtgaaggat gcgccgggca gctatcccga gctgatggaa tgggcccgca
     2521 agaatccgcg gaaattcggc tacaacggca tcaagggcgg catgtccggc gttgccttcg
     2581 tgtcgggctg ggtggcggcc ttcggcggcg atgccgccaa gctcgagaaa ggcccatacg
     2641 atcccaatgc caaggcgcag tgggacaagg cgctcgcgga cctcaaggag ttcaacaaga
     2701 gcgtcgtgat cacgcccggc aacgccggca cgctcgacat gctgaaccgc ggcgagatcg
     2761 ccatgggccc ggtctgggtc gacatgttct atacctggat ggcggacggc aagctgccgc
     2821 cgaacatgcg cctgaagctc gtctcgccgg gcatgccggg ccagccgatg tattacgcta
     2881 tcccggccaa ggccagcgcc aagctggcgc aggacttcgt cgccctcgcc accagccccg
     2941 aggtgcaggc ggaaggcatc gtcaagcgct tcaactggta tcctggcatc gacgccaaga
     3001 atctcgaggg caagctcgac caggccgcct ggcagaagct gttcgccgac atcaagcccg
     3061 aggacctgtc gagcaagggc aagccgttcc cgatcgcccc ctacttcaac gacatcctcg
     3121 aagcctacga acgcaaggtg gccaattgac tattccctct cccctggatc tcgggtgttc
     3181 ccgagatcca gcgccatagt gcgcggcagc ccaccgggtg cgggggaggg acttatccgg
     3241 atagcgcccc cctcatcggg ccgctttaaa gattaaacag cgcgtgaaat gccccgcccc
     3301 tcgctccttg ccctgaccct cgtcgcgccg gcgctggcgc tggtggcggc gctgttcctg
     3361 tatccgctca gctattcgct ggtggccgcg ttcacggccg acggcgcctt gacgctgaga
     3421 catttcgaga aagcattcga gctctattcc ggcgatatca ggttcacgtt gttcatcgtg
     3481 gtcacggcga cgatcctgat cgcgctgatc tcggcggcga tcgccggcgt gttgacgctg
     3541 agcgagacgc cgtggctgat cacaggcctg cgctggctct accgctggcc gttgttcatt
     3601 ccgttcatcg tcgccgccca atgcatgcgc acgttcctcg ccaagaacgg gctcatgaac
     3661 aattccttcg tcgcgctggg cgtgctcgat ccgtcgcaga cgcaaagcct gctcgactgg
     3721 cgcggcatcg tcatcacctt cgtgtggaag caggtgccgt tcgtcacgct gatgctcgcc
     3781 ggcgccatgg cgtccctcga ccgcgccaca atcgaggcgg gccgcaacct gggcgcgggg
     3841 cggttgcgca tcctcgtcga gatcgtcctg ccgcaggtgg cgcagacgct cctcgtcggc
     3901 ctcgtgctgt cgttcgtgac gatgctgtcg gtgctgtcgg tgccgatgat ggtcgcgggc
     3961 tcgcagccga ccatgctgac ggtcgacatg gccttccgca tcaacgccta tggcgactac
     4021 gccaccgcca acgccctcgg cgtcatctcc tacgccatga cggcgatcgc ggcgtggatc
     4081 tacttgcgcc accaggtgcg gcgcgaggcg gcggcatgag cgaggcgggt gcacaaccct
     4141 cccccttgcg gggagggtgg tcgagagagc ggagcgaccg agaccgggtg ggggtcgatg
     4201 gaacaaccgc cgcgcccggc gaggaccacc cccaccccgg ctcgacttcg tctcgccgac
     4261 cctccc
//
LOCUS       DATAIQ010000196         1624 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_425142, whole genome shotgun sequence.
ACCESSION   DATAIQ010000196 DATAIQ010000000
VERSION     DATAIQ010000196.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1624)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1624)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1624
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_425142"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..609
                     /locus_tag="VHN20_03415"
     CDS             <1..609
                     /locus_tag="VHN20_03415"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015821669.1"
                     /note="Catalyzes the rate-limiting step in dNTP synthesis;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vitamin B12-dependent ribonucleotide reductase"
                     /protein_id="HEX2724851.1"
                     /translation="LGLQYGVPLEEYVEAFTFTRFEPAGFVSGNDSIKNATSILDYVF
                     RELAISYLSRYDLAHVDVSEIGHDVLGRGDEEGRRPEGEAPATGAERIVSKGLVRGKQ
                     DRLMLIRGGIGLTDGATALQGEEGLVTDRTTGQLGFLSASPSPAPAAAAGTGSATTTS
                     RRAEALMKGYQGDACGECGNFTLVRNGTCMKCDTCGSTTGCS"
     gene            899..1249
                     /locus_tag="VHN20_03420"
     CDS             899..1249
                     /locus_tag="VHN20_03420"
                     /inference="COORDINATES: protein motif:HMM:NF045455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724852.1"
                     /translation="MKAIYDKSGRLIGWAGHNGRLMNRNGGSAFWINQEGNIYDYGGR
                     HAGWWEGDHWRGPDGGVIGWQSGATTLGVTPPLAELPPLPPFPMLELPRPSAELARAR
                     PVRRAGWSAYAPLG"
     gene            1355..1594
                     /locus_tag="VHN20_03425"
     CDS             1355..1594
                     /locus_tag="VHN20_03425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724853.1"
                     /translation="MLRHRRQFSNHDEEELLRRLADTRSICTRAMGKTPLNGPVYIAL
                     TQVTEAIDEVSAATGRKREYFWLKPPSGTSHAEGG"
BASE COUNT          287 a          581 c          534 g          222 t
ORIGIN      
        1 ctcggcctgc aatacggcgt gccgctcgag gaatatgtcg aggccttcac gttcacgcgc
       61 ttcgagccgg cgggcttcgt gtccggcaac gactcgatca agaacgcgac gtcgatcctc
      121 gactacgtgt tccgcgagct cgcgatctcg tatctcagcc gctacgacct cgcccatgtc
      181 gacgtgtccg agatcggcca tgacgtgctc ggccgcggcg acgaggaagg caggcgtccg
      241 gaaggcgaag ctcccgcgac cggcgccgag cgcatcgtct cgaagggcct tgtgcgcggc
      301 aagcaggacc gcctcatgct gatccgcggc ggcatcggcc tcaccgacgg cgccaccgcg
      361 ctgcagggcg aggaagggct cgtcactgat cgcaccactg gccagctcgg cttcctgtcg
      421 gcgtccccct cccctgcccc ggctgccgcc gcgggcacgg ggtcggcgac cacgaccagc
      481 cggcgcgccg aagccctgat gaagggctac cagggcgacg cctgcggcga gtgcggcaac
      541 ttcacgctcg tgcgcaacgg cacctgcatg aagtgcgaca cctgcggctc gaccacgggc
      601 tgctcgtaag agatcggctg gccccggaga gcgcgcgctc tccgggccac ccctcaggga
      661 atttgcatca gttgcgtcaa tatcgcgtcg gggcccttgg ccccaaaaca ccaacgccgg
      721 agcgaggctc cggcgctggg acccacgaag aaaccggtca gggtccttgt gggggcggaa
      781 gaagcagact cgctgcgttc tcccgggtgg cactgggaac ctaagcgagt cgcattcgga
      841 tcgtccagcg gagaccttgt cacaggcgag cgccaggcgc tcgcgtcgcg aggcacacgt
      901 gaaagcgatc tacgacaagt ccggccggct gatcggctgg gccggccata acggccggct
      961 gatgaaccgc aacggcggca gcgccttctg gatcaaccag gaaggcaaca tctacgatta
     1021 cggcggccgt catgccggct ggtgggaagg cgaccactgg cgcggccccg acggcggcgt
     1081 catcggctgg cagtccggcg ccacgacgct cggcgtcacc cctcccctcg ccgagctgcc
     1141 gcccctgccg cccttcccca tgctcgagct gccgcggccc tcggccgagc tggcgcgggc
     1201 gcggccggtg cggcgcgcgg gatggagcgc ctacgcgccg ctcggatgac gtcatcgcca
     1261 acctgcaaag aggcggtgcc ccgcggcgcc cctcaaacgc aggatcgatg cgcaacaccc
     1321 gatacgtcca tccacagcaa agcaggacca tgacatgctc cggcatcgcc gccagttctc
     1381 aaatcacgac gaggaagagc tcctcagacg cctcgccgac acccgcagca tctgcaccag
     1441 agccatgggc aagacgccgc tcaacgggcc ggtctacatc gcgctgacgc aggtcaccga
     1501 agcgatcgac gaggtctccg ccgcgacagg gcgcaagcgc gagtattttt ggctgaagcc
     1561 cccttcgggg acatcgcacg cggaaggcgg gtgaagccac cgcggccagc gcaccacgat
     1621 gcga
//
LOCUS       DATAIQ010000197         2259 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_102308, whole genome shotgun sequence.
ACCESSION   DATAIQ010000197 DATAIQ010000000
VERSION     DATAIQ010000197.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2259)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2259)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2259
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_102308"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..191
                     /locus_tag="VHN20_03430"
     CDS             <1..191
                     /locus_tag="VHN20_03430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007633805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEX2724854.1"
                     /translation="IASLSLASVMMTKESINRAYETTLSEGIRFERRVFHALFATADQ
                     KEGMAAFVEKRAPKFTNR"
     gene            197..1192
                     /locus_tag="VHN20_03435"
     CDS             197..1192
                     /locus_tag="VHN20_03435"
                     /EC_number="4.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018324392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threo-3-hydroxy-L-aspartate ammonia-lyase"
                     /protein_id="HEX2724855.1"
                     /translation="MTSVTGLEAAPPQVSVPTFDDVRAAARRISGIAQRTPVLTSRTA
                     DARTGAKLFFKCENLQRVGAFKFRGAYNAIAGLGEEQRRRGVITFSSGNHAQAMALAA
                     QLQGVKVTVIMPHDAPAMKVAATRGYGAEIVFYDRFKEDREAMGRELAAQGGLTLIPP
                     FDHPGVIAGQGTAALELIEEVGALDVLLAPLGGGGLLAGCALAAKALSPGCSVIGVEP
                     EAGNDGQQSFRKGEIVRIPVPQTIADGAMTTSLGAHTFAVMRGSVDDVLTVPDRMLVA
                     AMRFFLERMKIVVEPTGCLAAAAVLEGVYPCAGKRVGVILSGGNIDLQSLRGFLE"
     gene            1485..1751
                     /gene="rpsT"
                     /locus_tag="VHN20_03440"
     CDS             1485..1751
                     /gene="rpsT"
                     /locus_tag="VHN20_03440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015933959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000312 - plastid small ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HEX2724856.1"
                     /translation="MANTKSAKKMTRKIARRTEVNKARRSRMRTYLRKVEEAIATGDQ
                     TAANEALRAAEPEIMRAAQKGIVHRNMASRKVSRLAARVKAMAA"
BASE COUNT          385 a          748 c          764 g          362 t
ORIGIN      
        1 cgatcgcatc gctgtccctc gcgagcgtga tgatgaccaa ggaaagcatc aaccgcgcct
       61 acgagaccac gctctccgag ggcatccgct tcgagcggcg cgtgttccac gccctgttcg
      121 cgaccgccga ccagaaggaa ggcatggctg ccttcgtcga gaagcgcgcg ccgaaattta
      181 cgaacaggtg agtgtcatga cctccgtcac cgggctcgaa gccgccccgc cacaggtgag
      241 cgtcccgacc ttcgacgacg tgcgcgccgc cgcgcggcgc atcagcggca tcgcccagcg
      301 cacgccggtc ctcacctcgc gcacggcgga cgccaggacc ggggcaaaac tgttcttcaa
      361 atgcgagaac ctgcagcgcg tcggcgcgtt caagtttcgc ggcgcctaca acgccatcgc
      421 cggcctcggc gaggagcagc gccggcgcgg cgtgatcacc ttctcgtccg gcaaccacgc
      481 ccaggcgatg gcgcttgcgg cgcagctgca gggcgtaaag gtgacggtca tcatgccgca
      541 cgacgcgccg gccatgaagg tggcggcgac gcgcggctac ggcgctgaga tcgtcttcta
      601 tgaccgcttc aaggaagatc gcgaggccat ggggcgcgag cttgccgcgc agggcggcct
      661 gaccctgatc ccgcctttcg accatcccgg cgtgatcgcc gggcagggga cggccgcgct
      721 cgagctgatc gaggaagtcg gcgctctcga cgtgctgctg gcgccgcttg gcggcggcgg
      781 cctgctcgcc ggctgcgcgc tggccgcgaa ggccctgtcg ccgggttgca gcgtgatcgg
      841 cgtcgagccg gaggccggca acgacggcca gcaatcgttt cgcaagggcg agatcgtgcg
      901 cattccggtg ccgcagacga tcgccgacgg ggctatgacg acatcgctcg gcgcgcatac
      961 cttcgcggtg atgcgggggt cggtcgacga tgtcctcacg gttccggacc gcatgctcgt
     1021 cgccgccatg cgcttttttc tggagcgcat gaagatcgtc gtcgagccga ccgggtgcct
     1081 ggcggcagcg gcggtcctgg aaggcgtcta tccctgcgcc ggcaaacggg tcggggtcat
     1141 cctgagcggc ggcaatatcg atctgcaaag cttgcgcggc ttcctggagt gacacgatgc
     1201 tcaccttctc ccagagggag gaggtgtcgc cgaaggccac ggatgagggg tggggcctct
     1261 cggagatgac ggacctctca cccggtgcgc tgccgcgcac ctggcctcgc ccttcgggag
     1321 agcgcgtact aaatgttgac gcccgctttt cccgcgtcta taagccgcca ccaagagccc
     1381 gtaggtcccg gactggcggg ctcgatccat ttcaactgtg acgccggtcg gcgagagctt
     1441 tttccagggc gctccgtcgc gatcggcgtt tgacgaggtt aaccatggcc aacacgaaat
     1501 cggccaagaa gatgacgcgc aagatcgcca ggcgcaccga ggtcaacaag gcgcgtcgca
     1561 gccgcatgcg cacctatctg cgcaaggtgg aggaggcgat cgccaccggc gatcagaccg
     1621 ccgccaacga ggcgctgcgc gctgccgagc cggagatcat gcgcgcggcg cagaagggca
     1681 tcgtgcatag gaacatggcg tcgcgaaaag tgtcgcggct cgccgcccgc gtgaaggcga
     1741 tggcagcctg atcgcatcgg cacatcaaag gtgatgaagc ccggccatgc gccgggcttt
     1801 ttcatttgcg ggccccctcg cggcgcgccg gaattaagat ttgacggcgc ctgcggcggc
     1861 tcgcgattgc cggcgccacg gactcgcatc ggacgttaat ggacccgaag gcggcccggc
     1921 cgacgcgtta aggcctggcg atgttcttgg cgccgcaggg aaggggcggc atcgtgcgcc
     1981 ccgttcttga agccgatgac gggacgctct gagattctcg cgtctcgttc gggcaagcat
     2041 gaacggtgac gaagccgacg agcagcgcgc gtccgagatg gctcaccgca cgcggctcag
     2101 atcttacgtc tggtcacacg cccgccgcgc acggaagcga agcggatcag gatcagatct
     2161 ttcacttgtt aatccggctt ggcgcgaccc gcgcgttaac atctgacctt gtcgctccca
     2221 cgagccacgc gcatcgcatc gccgctgact gatcgagcc
//
LOCUS       DATAIQ010000198         5124 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_50661, whole genome shotgun sequence.
ACCESSION   DATAIQ010000198 DATAIQ010000000
VERSION     DATAIQ010000198.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 5124)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5124)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5124
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_50661"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(243..1202)
                     /locus_tag="VHN20_03445"
     CDS             complement(243..1202)
                     /locus_tag="VHN20_03445"
                     /inference="COORDINATES: protein motif:HMM:NF013625.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding protein"
                     /protein_id="HEX2724857.1"
                     /translation="MSSGDHDGEFYSLARAPQQRQQSRDGARNWQIAIMLMMVGAASA
                     CALFLAAPSPSSSRSSEPVRPAGASTRLELRAAVEPFVQRPGSEAPPARKPAAMPAPP
                     TDAVALQRPAPVRSQSAPAPTDDGPALTGAIGEARSPFPRVVPKEALLDVKTVRPATK
                     VQRRLAELGHFSGPATGIWGPISRVALRSFKEANQLPSDDAWDAVTQEALFSANARRA
                     HAFVGRWGPDAQACSRGARKGGFLPTMIESSGARAGDVTCAFKEKRQAGEAWDIVAQC
                     TKARERWNAHIRLAVKNDRLTWTSERGSQTYVRCSDRLQVASE"
     gene            1711..2850
                     /locus_tag="VHN20_03450"
     CDS             1711..2850
                     /locus_tag="VHN20_03450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020184363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HEX2724858.1"
                     /translation="MPRVQLHRFIDLAKPAPKTDRLDGPSRRAFLAKATALAGITAMA
                     PDAFARNFDPGAPPQRYPDPDIVVIDKRFKSKLGNTPIQRLYTGTLWAEGPAWSGVDR
                     YLLWSDIPNDENLRWLEEDSHVARRFRSPAGNSNGNTFDYEGRQIACQHGTRKVVRYE
                     HDGKTTVIADKFEGQEFNAPNDAVVHPNDGSIWFTDPGYGSLMEYEGNRLPGSATNPQ
                     PIRKEAIYRIDRSGTITRVADEPFKPNGLCFSNDYKRLYVADTGKSHYDQAKPIIWAY
                     DVDGARLKNPQTFTSMEMDGKAGFADGIRCDEDGNVWASAGWVGDGYDGVHIFSPEGQ
                     RIGQIRLPEICSNVCFGGSKRNRLFMTASQSLYSCFVETRGAHIT"
     gene            3054..3476
                     /locus_tag="VHN20_03455"
     CDS             3054..3476
                     /locus_tag="VHN20_03455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014328512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX2724859.1"
                     /translation="MKPRIKVLTLAVSDLERSLAFYRDGLGLATEGIIGQEFEHGAVV
                     FITMNEGLVLALYPTASLGKEANIRATTERLGAIAIGHNVNSKAEVDAVMAQAEQAGA
                     VITDPARERFWGGYSGHFHDPDGHVWEIAWNPQWSIPD"
     gene            3591..4277
                     /locus_tag="VHN20_03460"
     CDS             3591..4277
                     /locus_tag="VHN20_03460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012091424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase family protein"
                     /protein_id="HEX2724860.1"
                     /translation="MRKIVVGAFVSLDGVMQAPGGPEEDPTGGFKYGGWVTTHWDDTI
                     GAAMAETFAAPFDLLLGRTTYDIFAAHWPYIETDPTKSAFDKLNSDIARTFNAITKYV
                     ATHSPETLSWRNSQPLGSDVVAAVRALKKQDGPLLLTQGSTVLLQTLLAHDLVDEFRL
                     VIFPIVLGNGKRLFGNGVTPAAFRLTKSTTSPSGVLLAIYERAGEIATGSFGLERPTE
                     AEIERRKALT"
     gene            4342..4869
                     /locus_tag="VHN20_03465"
     CDS             4342..4869
                     /locus_tag="VHN20_03465"
                     /inference="COORDINATES: protein motif:HMM:NF024675.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HEX2724861.1"
                     /translation="MTEIAPSPADDDRFGSPLLPRYRAAVLPEWADRNEHLNNSYYLV
                     AVQSAYVSALRLWRGEADRERSSTGNFTMQSLVTHVRELKLGANLLIVPRLLAVDEKR
                     THVLIELYNADKGFLGAVIEKTSINVIRGRPPKVANFSDEMRDRLQAVARSHAEAPMP
                     SGIRPVLALNPRAQG"
     gene            complement(4892..>5124)
                     /locus_tag="VHN20_03470"
     CDS             complement(4892..>5124)
                     /locus_tag="VHN20_03470"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HEX2724862.1"
                     /translation="NSWLAIRDAAVRGLGIARVAEFAVQDLIAAGQLEKLFAGTVHSD
                     QHVHALFPRTPQVPAKLRLLMDFFAARLASRF"
BASE COUNT          913 a         1724 c         1673 g          814 t
ORIGIN      
        1 tcctgcgcca tgcgcttgtg cccatcgaca agcaggggct gccggcgtat ctcgaatcat
       61 ctaacccgga gaacatcccg ctttacgagc ggcacgggtt tcgggcgctc ggcgtcatcc
      121 aggtcgccga ctcgccgccg atcacgccga tggtgcggcc gccgcaataa atgggagcgg
      181 catcggtccg gtgtgaagcg atccgcttcg agcacgttcg cgaggctctt acgtgctggc
      241 gactactcgc tggcgacttg aaggcgatcg ctgcagcgca cgtaggtttg cgagccgcgc
      301 tcgctcgtcc aggtgagacg atcgttcttg accgcgagcc tgatgtgcgc gttccagcgc
      361 tcgcgcgcct tagtgcactg cgcgacgatg tcccatgctt cgccggcttg gcgtttttcc
      421 ttgaaggcgc aggtcacgtc gccggcccgc gcgccgctgc tttcgatcat ggtcggcaga
      481 aagccgcctt tgcgtgcccc gcgcgagcag gcctgcgcgt ccggccccca gcggcctacg
      541 aaggcgtgag cccgccgcgc attggcgctg aagagcgctt cctgcgtgac cgcgtcccag
      601 gcgtcgtcgg aggggagctg gttcgcttcc ttgaacgagc gcagggcgac gcgtgagatc
      661 ggcccccaga tgccggtcgc gggacccgaa aaatggccca gctccgccag ccggcgctgg
      721 accttcgtcg ccggccttac cgtcttcacg tcgagcagcg cttccttcgg caccacccga
      781 ggaaaagggc ttctggcctc gccgatggcg cccgtcagcg ccgggccgtc gtccgttggt
      841 gccggcgcgc tctgtgagcg gacgggggca ggccgttgca gggcaacggc gtcggtgggg
      901 ggcgcgggca tggcagctgg cttgcgcgcg gggggcgctt cgctgccggg cctctgcacg
      961 aacggctcga cggcggcgcg cagctcgagc cgggtggacg cgcccgccgg ccgcaccggc
     1021 tcgcttgaac ggctgctcga gggcgacggc gctgccagga acagcgcgca agccgacgcg
     1081 gcgccgacca tcatcagcat gatggcgatc tgccagttgc gggcgccgtc gcgtgactgc
     1141 tgccgctgct ggggcgcgcg cgccagggaa tagaactcgc cgtcgtgatc gccggacgac
     1201 atacgccgcg tcatgggtca gcaggtggtg cggatgctgc tccagaacgt gacgctcaac
     1261 agcaccagag cacaggacag gccagcaagc gtgtcgagag cggaaccgaa aatgaaggct
     1321 gtcatgcgcc ctccgccgcg gatgaagcat cggcatcctg ctgccgcgat ggttaataaa
     1381 gtcctaagac gacttgcgga gcggccttcg atcgatgttc gcggtcccgc gtctcaccgt
     1441 tttgtcagcc aagccggccg cgcacctcct tgcctttttc ggcgcacagg cgcccaatcg
     1501 ggcggcggga gaattgcgcg gctgcgtcgc gtctcgctgc gcgatgggac cagacggtcc
     1561 cggcgaaagc cctgctcccg cggcgcgcgg tccgcccgat caaacccgtt gggcgagacg
     1621 acggcgtgcc gactcgaacg ccgggatgat ccgaccgcga gaccggcatc agcttcgcgg
     1681 gcatgcccgg caacgaccag ggaggagccc atgccgcgcg tgcaacttca tcgcttcatc
     1741 gatctcgcca agcccgcccc gaaaaccgac aggctcgacg gcccctcgcg ccgtgccttt
     1801 ctcgccaagg cgacggcgct cgccggcatc accgccatgg cgcccgacgc gttcgcgcgc
     1861 aacttcgatc ccggcgcgcc cccgcaacgc tatcccgacc ccgacatcgt cgtgatcgac
     1921 aagcggttca agtcgaaact cggcaacacg ccgatccagc ggctctatac ggggacgctg
     1981 tgggcggaag gcccggcctg gagcggcgtc gaccgctacc ttctgtggag cgacatcccc
     2041 aacgacgaga acctgcggtg gctcgaggag gacagccacg tagcccggcg tttccgctcg
     2101 ccggcgggga actcgaacgg caacaccttc gactacgagg gccggcagat cgcgtgccag
     2161 cacggcacgc gcaaggtcgt gcgctacgag cacgacggca agacgaccgt gatcgccgac
     2221 aagttcgaag gccaggagtt caatgccccg aacgacgccg tcgtccatcc gaacgacggc
     2281 tcgatctggt tcacagatcc cggctacggc tcgctgatgg aatacgaggg taaccggctg
     2341 cctggaagcg ccacgaaccc gcaaccgatc cgcaaggagg cgatctaccg gatcgaccgg
     2401 agcggcacca tcacgagggt cgccgacgag ccgttcaagc cgaacgggct gtgcttctcc
     2461 aacgactaca agcggcttta cgtggccgac acgggcaagt cgcattatga tcaggccaag
     2521 cccatcatct gggcctatga cgtcgatggc gccaggctca agaacccgca gaccttcacc
     2581 agcatggaga tggacggcaa ggccggcttc gccgacggca tccgctgcga cgaggacggc
     2641 aacgtctggg ccagtgccgg gtgggtcggc gacggttacg acggcgtgca catcttctcg
     2701 ccggaaggcc agcgcatcgg ccagatccga ttgccggaga tctgctcgaa tgtctgcttc
     2761 ggcggctcca agcgcaaccg cctgttcatg accgcgagcc agtcgctcta cagctgcttc
     2821 gtcgaaacgc gcggcgcgca catcacgtga cagctcctgc cactcccctt gtattgctcc
     2881 cctcccccct tgcggggagg ggttgggggt ggtggggtga tcccgcctgc tgaaatgtag
     2941 aaatttaaac cggcctggta tcggcgccag atcatcatcg tctgcgctga gttctgaccc
     3001 gtcgccgcac acccctagcc ctccccgcaa gcaggagggg caagagatcg tcaatgaaac
     3061 cgcgcatcaa ggtcttgacc ctcgccgtga gcgatctcga gcgctcgctg gccttctatc
     3121 gtgatgggtt gggcctggcg acggagggca tcatcggcca ggaattcgag cacggggcgg
     3181 tggtgttcat caccatgaac gaaggcctcg tcctggcgct ctacccgacg gcttcgctgg
     3241 gcaaggaagc caatatccga gcgacgaccg aaaggctcgg cgccatcgcc atcgggcaca
     3301 acgtcaactc gaaagccgaa gtcgacgccg tcatggcgca ggccgagcag gccggcgccg
     3361 tcatcaccga tccggcgcgc gagcgtttct ggggcggata ttccggccat ttccacgacc
     3421 ccgacggcca cgtctgggag atcgcctgga acccgcaatg gagcatcccc gactaaatag
     3481 tcggcgcggc atgtcgggct gcggaccgcc cgttcgtccc gcgcgtgtat gaccaatcgc
     3541 gccgcggcag ccacgccgtc gccgccacat gacgttcaag ggagcatgcc atgcggaaga
     3601 tcgtagtcgg agcgttcgtc agccttgacg gcgtgatgca agcgccgggc gggccggagg
     3661 aggacccgac cggcggcttc aaatacggcg gctgggtgac gacccattgg gacgacacca
     3721 tcggcgccgc catggccgag actttcgccg cgccgttcga tctgctgctc ggccgcacga
     3781 cctacgacat ctttgccgcg cattggccgt atatcgaaac ggatcctacc aagagcgcct
     3841 tcgacaagct gaacagcgac atcgcccgaa cgttcaatgc catcaccaaa tacgttgcaa
     3901 cgcattcgcc cgagacgctc tcttggcgga atagccagcc gctcggcagc gatgtcgtag
     3961 cggccgtgcg cgcgctcaag aagcaggacg gcccgcttct gctgacccag ggcagcacag
     4021 tgctgctgca gacgctgctc gcccacgacc tggtcgacga gttccggctg gtcatcttcc
     4081 cgatcgtcct cggcaacggg aagcgcctgt tcggaaacgg cgtcacgccg gccgccttca
     4141 ggctgacgaa atcgacgacg tcgccgagcg gggtgctgct cgcgatctac gagcgcgccg
     4201 gcgagatcgc gacgggatcg ttcgggctcg aaaggccgac cgaagccgag atcgaacgcc
     4261 gcaaagccct gacttgaggc gggtcggaaa agggaggggg gtgcttgcgt cacgagcgga
     4321 ggccgctaaa ccagctcccg catgacagag atcgccccct cccccgccga tgacgaccga
     4381 ttcggctccc cgctccttcc gcgctaccgt gctgcggtgc ttccggaatg ggccgaccgt
     4441 aacgagcatt tgaacaactc gtattatctg gtcgccgtgc agagcgccta cgtgtctgcc
     4501 ctgcgtctct ggcgcggcga ggcggacagg gagcgaagca gcaccggcaa cttcacgatg
     4561 cagtcgctgg tcacgcatgt gcgcgagctg aagctcggcg ccaacctcct gatcgtgccg
     4621 cgtcttctcg cggtcgacga gaaaaggacg cacgtgctga tcgagctcta taacgcagac
     4681 aagggatttc tcggcgccgt gatcgaaaag acctcgatca acgtgatccg cggaaggccg
     4741 ccaaaagtcg ctaacttctc ggacgagatg cgcgatcggc tgcaggcggt ggcgaggtcg
     4801 catgccgagg cgccgatgcc gtccggcatc cggcctgtgc tcgccctcaa cccgcgagcg
     4861 caaggttgag cccggtcgca gcgaaccgca gtcagaagcg cgatgccagg cgcgccgcaa
     4921 aaaaatccat caacagccgc agctttgcgg ggacctgcgg tgttctcggg aagagcgcgt
     4981 gcacgtgctg gtccgaatgg accgtgccgg caaaaagctt ttccagttgt ccggctgcga
     5041 tcaggtcctg cacagcaaac tccgccaccc gggcaatgcc gaggccgcgc acggcggcgt
     5101 cacggatcgc gagccagctg ttgg
//
LOCUS       DATAIQ010000199         2676 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_327549, whole genome shotgun sequence.
ACCESSION   DATAIQ010000199 DATAIQ010000000
VERSION     DATAIQ010000199.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2676)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2676)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2676
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_327549"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..608)
                     /locus_tag="VHN20_03475"
     CDS             complement(<1..608)
                     /locus_tag="VHN20_03475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lectin"
                     /protein_id="HEX2724863.1"
                     /translation="MTRTSLHVSAAVALICASPLAGALAQQGGAPAMTFFVTSTGVGK
                     GADLGGIAGADKHCQTLAAAAGAGSRTWRAYLSTQAAGGEAAVNARERIGKGPWHNAK
                     GEEIARDVDQLHGSNKLTKQTALSEKGEPVKGRGDTPNEHDILTGSQPDGTAFAAGED
                     RTCGNWTKSGDGAAMVGHHDRMGLRDDEPSRSWNASHPSRGC"
     gene            1000..2037
                     /locus_tag="VHN20_03480"
     CDS             1000..2037
                     /locus_tag="VHN20_03480"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEX2724864.1"
                     /translation="MAVIYPSRRSAVVGLACALAGGGAMAQPADSFWRGKTVTVIAPT
                     APGGGYDAYTRLLARHIGKHIPGNPTVVVQNMPGAGGMVAANHVFNVAPRDGTVIALI
                     DRGIPTAPLLYGDESKAKFDPVKFTWLGSMAREAGMGVVASRSPALTVDDMKKTEVFF
                     GATGPETDNAAYARLFNDLLGTKIKVLSGYKNQPEIFLGVEKGELHGLFITGYSGSAK
                     AHVEGQLAKGQMKLFVQMTMQKDPALPDVPGVLDLVTRPDDRQVIELLFARLALGRPV
                     LAPPGVAADRAATLRNAFRATLADPELLAEAEKQGLAIEPMWADEAEAMVQRLYQLPA
                     ELIERTRKLIR"
     gene            2081..>2676
                     /locus_tag="VHN20_03485"
     CDS             2081..>2676
                     /locus_tag="VHN20_03485"
                     /inference="COORDINATES: protein motif:HMM:NF013053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family protein"
                     /protein_id="HEX2724865.1"
                     /translation="MAGRVFEDHCWKDVVDDEILEIYEAYRREVFVGRSPVVLAIDLY
                     NKAYRGGDRPVREVNRQFPGSCGVNAWAAIGPTQRLFAAARAAGVPIIYTTRHADTSG
                     IKSTFRNLVGESEEDYGIFADLAPQAGELVVHKERASAFFGTTLITHLRRLGAESLII
                     CGESTSGCVRASTVDAYSYGFHNVLVEECTYDRSALSH"
BASE COUNT          398 a          900 c          936 g          442 t
ORIGIN      
        1 ctgcagccgc gcgagggatg cgacgcattc cacgagcgcg acggctcgtc gtcgcgcagt
       61 cccatgcggt cgtggtggcc gaccatcgcg gcgccgtcgc cgctcttcgt ccagttgccg
      121 caggtgcggt cctcgccggc cgcgaaggcg gtgccgtcgg gctgcgaccc ggtcaggatg
      181 tcgtgctcgt tgggcgtgtc gccgcggcct ttgaccggct cgcctttctc gctgagcgcc
      241 gtctgcttgg tgagcttgtt gctgccgtgc agctggtcga cgtcgcgcgc gatctcttcg
      301 cccttggcgt tgtgccacgg gcctttgccg atgcgctcgc gcgcgttgac cgcagcctcg
      361 ccgccggccg cctgcgtgct gagataggcg cgccacgtgc ggctgccggc gccggccgcg
      421 gcggcgagcg tctggcaatg cttgtccgcg ccggcgatgc cgccgaggtc ggcgcccttg
      481 ccgacgccgg tgctggtgac gaagaaggtc atggcgggcg cgccgccctg ctgcgcgagc
      541 gcgcccgcga gcgggcttgc gcatatcagc gcgacggctg ccgagacatg caggctggtc
      601 ctggtcatca ttccctccgg tcgctccgat cgttggcgga gccgcaaggc cgcgcatcgt
      661 ccgcggcaca gacgagcgta gcagagcggc gcggcggcgg cggacggctc ccgatcttgt
      721 gaagccgcat cggaaggaaa ccgacggcga ccggcgtcgc gcggaacttt gcctgcaggg
      781 gaaggttgtc tcgatgcgga ggcttctttg cccccactac agcttccgta cacttggccc
      841 cgtcttgagc gagctcggcg gggctttttg ctgccgtggt gcgcggcgcc agctcggctc
      901 ctgccttgcg ggtgcgggga tcgtcgctta gagcaaaaga aaacgaggcg ctcgggacga
      961 gccgaggcga ccgcaagcaa tcattggggg agagtggacg tggctgtgat ctatccgagc
     1021 cgccgttcgg ctgtcgtcgg gcttgcctgc gcgcttgccg ggggaggcgc gatggcgcag
     1081 ccggccgaca gcttctggcg cggcaagacc gtcaccgtga tcgcgccgac ggcgccgggc
     1141 ggcggctacg atgcgtatac gcgcctgctt gcgcgccaca tcggcaagca catccccggc
     1201 aacccgaccg tggtcgtcca gaacatgccg ggcgctggcg gcatggtggc ggccaaccac
     1261 gtctttaacg tcgcgccgag agatggcacg gtgatcgccc tcatcgaccg cggcatcccg
     1321 accgcgccgc tgctctacgg cgacgaatcg aaggcgaagt tcgatcccgt caagttcacc
     1381 tggctcggca gcatggcgcg cgaagccggg atgggcgtcg tggcgtcgcg ctcaccggcg
     1441 ctgaccgtcg acgacatgaa gaagacggaa gtgttcttcg gcgccaccgg cccggagact
     1501 gacaacgctg cctatgcgcg cctgttcaac gatctcctcg ggacgaagat caaggtgctg
     1561 tccggctaca agaatcagcc cgagattttc cttggcgtcg agaagggcga gctgcacggc
     1621 ctgttcatca ccggctattc cggcagcgcc aaggcgcatg tcgagggcca gctcgccaag
     1681 ggccagatga agctgttcgt gcagatgacg atgcagaagg acccggcgct gcccgacgtg
     1741 cccggcgtgc tcgatctcgt gacgcggccc gacgaccgtc aggtgatcga gctgctgttc
     1801 gctcgactcg cgctcggtcg cccggtgctg gcgccgccgg gcgttgcggc ggaccgcgcc
     1861 gcaacgttgc gcaacgcctt ccgcgcaacg ctcgccgatc cggagctgct cgccgaagcc
     1921 gagaagcagg gcctcgccat cgagccgatg tgggccgacg aggcggaagc gatggtgcag
     1981 cgtctctacc agctgccggc cgaactgatc gagcgcacgc gcaagctcat caggtgagcg
     2041 cgcctcagcg cctaaccatt tgcaacgaag ggagccgatg atggctggac gcgttttcga
     2101 ggatcattgc tggaaggacg tggtcgacga cgagatcctc gagatctacg aggcctaccg
     2161 gcgcgaggtg ttcgtcggcc gcagtccggt cgtgctcgcg atcgaccttt acaacaaggc
     2221 gtatcgcggc ggcgaccggc cggtgcgcga ggtcaaccgc cagtttccgg gttcgtgcgg
     2281 cgtgaatgcc tgggcggcga tcgggccaac gcagcgcctg ttcgcggcgg cccgcgccgc
     2341 cggggtgccg atcatctaca cgacgcgcca cgccgacacg tccgggatca agtccacgtt
     2401 ccgcaacctc gtcggcgaga gcgaggagga ttacggcatc ttcgcggatc tggcgccgca
     2461 ggcgggcgag ctcgtcgtcc acaaggaacg cgcgtcggcc ttcttcggca cgaccctcat
     2521 cacgcatttg cgccggctcg gggccgagag cctgatcatc tgcggcgaga gcacctcggg
     2581 ctgcgtgcgc gcctcgaccg tcgacgccta ttcctacggc ttccacaacg tgctcgtcga
     2641 ggaatgcacc tacgaccgct cggccctcag ccacaa
//
LOCUS       DATAIQ010000200         2276 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_235446, whole genome shotgun sequence.
ACCESSION   DATAIQ010000200 DATAIQ010000000
VERSION     DATAIQ010000200.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2276)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2276)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2276
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_235446"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..402)
                     /locus_tag="VHN20_03490"
     CDS             complement(<1..402)
                     /locus_tag="VHN20_03490"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pyrophosphohydrolase"
                     /protein_id="HEX2724866.1"
                     /translation="MSARRNSARSRTLPYRPCVGVMLLNRDGRVFLGRRRTEAGPEHV
                     GDGYAWQMPQGGIDPGEDPYAAALRELYEETNVRSVAPLGEAPDWYAYDLPAIVAGRA
                     WRGRYRGQSQKWFAFRFTGLDDEIDISHPGGG"
     gene            complement(399..1634)
                     /locus_tag="VHN20_03495"
     CDS             complement(399..1634)
                     /locus_tag="VHN20_03495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012752813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divergent polysaccharide deacetylase family
                     protein"
                     /protein_id="HEX2724867.1"
                     /translation="MRGEFDIVDAVSNDLMKPLGIEQSEPGRWSFRLPVRQMLGAALL
                     VAVGSLALYVAFVDDPLGGEPHALVPIESKLPRAEPDAREAHDAPPPRMPDAAQQPDT
                     RPRASASEVESASGVSVVRPDGVGPPPSLVIKVPTSSALSPAPDPRLIERTRNGNLPR
                     IGADGARPAEVYARPDNMLPGGAPPVARVAIVVAGLGISQTATAAAISRLPPAVTLAF
                     APYGTDLEQHVTRARDGGHEVMLQAPMEPFDFPDNDPGPHTLTVEAKAQDNLERLHWV
                     MARVTGYVGLVNFMGSKLTAHEAALAPILQEIGARGLVFLDDGSSSRSLAGTIGAAVR
                     TPTARADVVLDAVARPDAIDKELERLEETARRRGLAIGTAGALPVTVDRVARWARTLE
                     SRGVLLVPVSSAFVQGAPR"
     gene            complement(1829..>2276)
                     /locus_tag="VHN20_03500"
     CDS             complement(1829..>2276)
                     /locus_tag="VHN20_03500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012333963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HEX2724868.1"
                     /translation="VLINGGSASASEIVAGALQDHKRATVLGTRSFGKGSVQTIIPLG
                     GSGGVRLTTARYYTPSGRSSQAKGIDPNQEILQEVPDELKGKDETKGEAGLRGHLRSG
                     DKEEKGGSSAYIPPDPAKDKQLNAAFDFLRGVRHNAANTTRGGVPN"
BASE COUNT          335 a          806 c          794 g          341 t
ORIGIN      
        1 gccgccgccc ggatggctga tgtctatctc gtcgtccagg ccggtgaagc ggaacgcgaa
       61 ccatttctgg ctctggccgc ggtaacggcc tctccaggcg cgccccgcca cgattgcggg
      121 caggtcgtag gcataccagt ccggagcttc gccgagcggc gccaccgagc ggacgttggt
      181 ctcctcgtag agctcacgca acgccgccgc ataggggtcc tcgcccggat cgatgccgcc
      241 ctgcggcatc tgccaggcat agccgtcgcc gacgtgttct ggtcccgcct ccgtgcggcg
      301 gcggccgagg aagacccgcc catcacggtt gagcagcatg accccgacgc atgggcgata
      361 aggaagcgtc cgcgacctcg cggaattgcg ccgcgcgctc accgaggcgc cccctgcacg
      421 aaggcgctgc tgacgggaac caggagaaca ccgcgcgact cgagcgtgcg cgcccagcgg
      481 gccacgcggt cgaccgtgac gggaagcgcg ccagcggtgc cgatggcaag gccgcggcgg
      541 cgcgcggtct cctcgagccg ctcgagctcc ttgtcgatgg catccggccg cgccaccgcg
      601 tcgagcacca cgtcagcccg cgccgtgggc gtgcgcaccg ccgctccgat ggtgccggcc
      661 agcgagcgcg acgacgagcc gtcgtccagg aataccagcc cgcgcgcccc gatctcctgc
      721 aggatcggcg caagcgccgc ctcgtgagcc gtcagcttgg accccatgaa gttgacgagc
      781 ccgacatagc ccgtgacgcg cgccatgacc cagtgcagac gctcgagatt gtcctgggcc
      841 tttgcctcca ccgtgagcgt atgcggcccc ggatcattgt cgggaaaatc gaacggctcc
      901 atcggcgcct gcagcatgac ctcgtggccg ccgtcgcggg cccgcgtcac gtgctgctcg
      961 aggtccgtgc cgtaaggcgc aaaggccagc gtcacggcag gcggcagcct gctgatcgcc
     1021 gcggccgtgg ccgtctgact gatgcccaga ccggccacga cgatggccac gcgcgcgacc
     1081 ggaggcgctc cccccggcag catgttatcg ggccgggcat aaacctccgc gggacgcgcg
     1141 ccatcggcgc cgatcctggg caggttgccg ttgcgggtgc gctcgatcag gcgcggatcg
     1201 ggagccgggc tgagcgccga cgacgtcggg accttgatga ccagcgacgg cggcgggccg
     1261 acgccgtccg gccggaccac ggacacgccg gacgcgctct cgacctcgct ggcgctggcg
     1321 cgcgggcggg tatcaggctg ctgggccgcg tcaggcatgc gcggcggcgg ggcatcgtgc
     1381 gcctcccgcg cgtccggctc ggcgcgtggg agcttcgact cgatcggcac gagcgcatgc
     1441 ggctcgccgc cgagcggatc atcgacgaaa gcgacataga gggcgagact gccgacggca
     1501 acgagcaggg cggcgcccag catctgtcgc accggcagcc tgaaggacca gcgtccaggc
     1561 tcggactgct cgattccgag cggtttcatc agatcgttgg acacggcgtc cacgatgtcg
     1621 aactccccac gcacgcgact ggcctcgttg cttaagtcac gtcggcccgt ccggctcaat
     1681 gtagcgcggc gggccgtgag aattcgttaa aacgtcggtc ggtcggggtt ccaactgatt
     1741 cgcagcatcc cggattggat ccaggaccgt ctcgatcgga ggcccggcag ccccggatca
     1801 cgttccgggg cggctggcgg atcaaggctc agttgggaac gccgccccgt gtggtgttgg
     1861 ccgcgttgtg gcggacgccg cgcaggaagt cgaaggcggc gttgagctgc ttgtccttgg
     1921 ccggatccgg cgggatgtag gccgacgagc cacccttctc ttccttgtcg ccgctcctca
     1981 ggtggccgcg cagaccggcc tcgcccttgg tctcgtcctt gcccttcagc tcgtccggga
     2041 cctcctggag gatctcctgg ttcggatcga tgcccttggc ctggctcgaa cggccggacg
     2101 gcgtgtagta gcgcgccgtc gtcaggcgaa ccccgccgct gccgccaagc gggatgatcg
     2161 tctgcaccga gcctttgccg aacgagcgcg tgccgagcac ggtggcgcgc ttgtggtcct
     2221 gcagggcgcc ggccacgatc tccgaagccg aggccgagcc gccgttgatc aacacc
//
LOCUS       DATAIQ010000201         1901 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_425453, whole genome shotgun sequence.
ACCESSION   DATAIQ010000201 DATAIQ010000000
VERSION     DATAIQ010000201.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1901)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1901)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1901
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_425453"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(268..>1901)
                     /locus_tag="VHN20_03505"
     CDS             complement(268..>1901)
                     /locus_tag="VHN20_03505"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: protein motif:HMM:NF012403.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEX2724869.1"
                     /translation="ELRTIAQRAGAAWNPGAKAFVYHGERLPGALQPFRSEPYSWERF
                     KEDELNGADPVPASPERDVQLRDHQKQAVAAVHAAVDAGRTGFLNADDVGLGKTIETW
                     AAALEMKDAETVLVVCPLAVVAHWRRTIQWMGDRGKRIVVINYDRLKKLFEVPAEIAS
                     GAGRRRKKKTRKVRTAKGIARYGEACSFDLIIWDESHKLRNVEAARSKMSLRLNAEAD
                     FVMWLSATAGQNPLELAYLAPLLAERTGARASDLKDYEAWCQAQGIGVVRGAYGKWHW
                     RGDTRDPAQRELAEDDLRTMRSILFEGPVPAGIRRSPTDIAGWPEINRILLPVALDSQ
                     DRALYGALWDEFRSELGLEASGKSNSRNALVARLRFRQKASLLRTAATVDLATELLDQ
                     GLQVAISVSFKETLSVVRDALQHQGYAVAEMHGDMTGPDKERQRMAFQQGKAPVCVYT
                     VEEGISLHQGEYNDARRANLIHDLRWSAIQMKQIEGRTHRDGRFSQVYWMLGEDTVEE
                     EIADIVARRIRSMSRMQGDEATVADIEKLLLGLAA"
BASE COUNT          294 a          642 c          611 g          354 t
ORIGIN      
        1 gcgcatcacg agttcgtgat aagcgggccg cacgttcgtt tcagcgagct tacgggggag
       61 ttaatattgt gagcgccgga tcaaattttg tccatcaatg acatgaaagc acgggagggt
      121 gagcagcttt gagccaccac cgagcgaaat cggtgttgcc gcacgttcgc gagcgacatc
      181 gggcgagttc gattgtgatc acgcttgcga tcttcgctgc ccttgagatg aaaccacccc
      241 cttgcgcggt ggtcgtgaat cgtcgtccta cgccgccagg cccagaagca gtttctcgat
      301 gtccgccacg gtggcctcgt cgccctgcat ccggctcatc gagcggatac gacgcgcgac
      361 gatgtccgcg atctcttcct cgacggtgtc ttcgccgagc atccagtaga cctgcgagaa
      421 ccggccgtcg cggtgcgtgc gcccctcgat ctgcttcatc tggatggccg accacctcag
      481 gtcgtgaatg aggttcgcgc gcctggcgtc gttgtactcg ccctggtgaa gcgagatgcc
      541 ctcctcgacg gtgtaaacgc agacgggggc cttgccctgc tggaaggcca tgcgctggcg
      601 ctccttgtcc ggcccggtca tgtcgccgtg catctcggcg accgcgtagc cctggtgctg
      661 caaggcatcg cggacgacgc tcagcgtctc cttgaaggag accgagatcg ccacctgcaa
      721 gccctggtcc agcagctcgg tggcgagatc gaccgtcgcg gcggtgcgca gcagtgacgc
      781 cttctgccgg aagcggagcc gcgcaaccag cgcgttgcgc gagttcgatt tgccgctcgc
      841 ctcgagcccg agctcgctgc ggaattcgtc ccacaatgcc ccgtacaggg cccggtcctg
      901 tgaatccaac gcgaccggca gcaggatgcg attgatctcg ggccagccgg cgatgtcggt
      961 cggcgaccgc cggatgcccg ccgggacagg gccctcgaac aggatcgagc gcatcgtcct
     1021 gaggtcatcc tccgccagct cgcgctgcgc cgggtccctg gtgtcgcccc gccagtgcca
     1081 cttgccgtaa gcgccccgga cgacgccgat cccttgcgcc tggcaccatg cctcgtagtc
     1141 tttcaggtcg ctcgcgcgtg cgcctgtgcg ctccgcaagc aagggcgcga gataggccag
     1201 ttccaaaggg ttttggcccg ccgttgcgga cagccacatg acgaagtcgg cttccgcatt
     1261 caggcggagg gacatcttcg agcgcgccgc ctccacgttg cggagcttgt ggctctcgtc
     1321 ccagatgatg aggtcgaagc tgcaggcttc cccgtagcgc gcgatgccct tcgcggtcct
     1381 cactttccgg gttttcttct tccggcgccg gcccgcgccc gacgcgatct cggcaggcac
     1441 ctcgaacagc ttcttcaggc gatcatagtt gatgacgacg atgcgcttgc cccggtctcc
     1501 catccattgg atggttcggc gccaatgcgc cacgacggcg agagggcaaa cgacgaggac
     1561 cgtctcggcg tctttcatct cgagggcggc ggcccacgtc tcgatcgtct tgcccagccc
     1621 cacgtcatcg gcattgagga acccggtgcg cccggcgtcc acggccgcgt ggacggcggc
     1681 gaccgcctgt ttctggtgat cgcgaagctg cacgtcccgc tcgggcgacg cggggacggg
     1741 gtcggcgccg ttgagctcgt cctccttgaa gcgctcccag gagtagggct ccgaccggaa
     1801 cggctgcaac gcacctggca gacgctcgcc gtgatacacg aaggccttgg cgccgggatt
     1861 ccacgcggcg cccgcgcgtt gcgcgatcgt cctgagctcg a
//
LOCUS       DATAIQ010000202         4279 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_425538, whole genome shotgun sequence.
ACCESSION   DATAIQ010000202 DATAIQ010000000
VERSION     DATAIQ010000202.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4279)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4279)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4279
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_425538"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            20..2551
                     /gene="napA"
                     /locus_tag="VHN20_03510"
     CDS             20..2551
                     /gene="napA"
                     /locus_tag="VHN20_03510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012330967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009325 - nitrate reductase complex
                     [Evidence IEA];
                     GO_function: GO:0008940 - nitrate reductase activity
                     [Evidence IEA];
                     GO_process: GO:0042126 - nitrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="periplasmic nitrate reductase subunit alpha"
                     /protein_id="HEX2724870.1"
                     /translation="MDLSRRAFLKTQAASAAAAAANVTLPAEAQNLAAGEDIRLQWSK
                     APCRFCGTGCGVMVGVKDGRVVATHGDMRAEVNRGLNCVKGYFLSKIMYGADRLTQPL
                     MRMRGGEFAKDGQFQPVSWDRAFDEMARQFKRVLKEKGPDAVGMFGSGQWTIWEGYAA
                     SKLMRAGFRTNNLDPNARHCMASAAVTFIRTFGMDEPMGCYDDFEHADAFVLWGSNMA
                     EMHPILWTRVTERRLSTPATKVAVLSVYEHRTTDLSDIPAIFKPGTDLAVLNYIANYL
                     IQNGAVKRDFVEKHCNIRMANTDIGYGLRPEHVLEQRAQHVNDAQVSHPSDFDAYARL
                     MSEYTVDKVSELSGVSKEKLEALAKLYADPKTKVMSLWTMGFNQHVRGVWANHMVYNL
                     HLLTGKISEPGNSPFSLTGQPSACGTAREVGTFSHRLPADMQVANPEHRKHAEHIWKL
                     PDGLLSGKVGYHAVQQDRMLKDGKLNAYWIMCNNNLQTAPNTNSETYPGYRNAGNFVV
                     VSDAYPTVTAMAADLILPTAMWVEKEGAYGNAERRTHFWHQLVNAPGDARSDLWQLVE
                     FSKRFTTDEVWPADILDKAPDYKGKSLYDVLFANGEVNKFPVSELDPAYENHEAKHFG
                     FYVQKGLFEEYASFGRGHGHDLAPFDTYHQVRGLRWPVVDGKETLWRYREGHDPYVEK
                     GAGLQFYGNPDKKANLIAAPYEPPAEAPDKEFDLWLVTGRVLEHWHSGSMTLRVPELY
                     KAFSGAVLFMHPDDAARRGLRRGQEVRITSRRGEIRSRVETQGRNRMPPGVVFVPFFD
                     ASQLINKVTLDATDPISKQTDFKKCAVKVSAVSVAQSAPARGGTR"
     gene            2548..3030
                     /locus_tag="VHN20_03515"
     CDS             2548..3030
                     /locus_tag="VHN20_03515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012330966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase cytochrome c-type subunit"
                     /protein_id="HEX2724871.1"
                     /translation="MKRIAFLSALAGFPCLFAGALFAQQIGGPALDAPRLKGPEPFTR
                     ETPAPAMQRQITDDVRRRRNYPDQPPLIPHAIEGYALDLNANKCLSCHSRRFTEQSQA
                     PMISVTHYQDRDGNFLGGVSPRRYACLACHVPQTMAPPLVENRFMDMDALVQPERRGR
                     "
     gene            3077..3646
                     /locus_tag="VHN20_03520"
     CDS             3077..3646
                     /locus_tag="VHN20_03520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016557230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NapC/NirT family cytochrome c"
                     /protein_id="HEX2724872.1"
                     /translation="MVRQAFTPARTLSLAFLTLGGFVAGVVFWGGFNTVLEATNTETF
                     CTSCHEMKTNVFEELKGTIHYANRSGVRATCPDCHVPHNWTDKIARKMQASKEVWGHI
                     FGSISTREKFLALRRHLAEREWERMKANDSLECRNCHSAESMDLAKQNPRAAGMHEKF
                     LFTGERTCIDCHKGIAHRLPDMSGVPGWQ"
     gene            3646..4212
                     /locus_tag="VHN20_03525"
     CDS             3646..4212
                     /locus_tag="VHN20_03525"
                     /inference="COORDINATES: protein motif:HMM:NF025013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4142 domain-containing protein"
                     /protein_id="HEX2724873.1"
                     /translation="MASPHHLALRRALRIAAGAALSASALSTSFHPVAAQPAATAPAP
                     QAIDPATFVRVVRSLAILQARAAEHAASRETRPETRAFAQKMAAFRGEQLPKLDAVAR
                     ERQVAVGAVLEFEHQVILENLQPLDSLELSRRYAELQLQALEQEIRAYGAAERAPDER
                     LRGYAAELRPRLEQLLEEARAMRQAVGP"
BASE COUNT          765 a         1462 c         1379 g          673 t
ORIGIN      
        1 acgcataagg gctgacccca tggatctgtc gcgccgcgcc ttcctcaaaa cccaggcggc
       61 gagcgccgcc gcggccgccg ccaacgtcac gctgcctgcc gaggcgcaga acctagccgc
      121 gggcgaggat atccggctgc aatggtcgaa agcgccgtgc cggttctgcg gcaccggttg
      181 cggcgtcatg gtcggcgtga aggacgggcg ggtcgtcgcg acccacggcg acatgcgggc
      241 cgaggtcaac cgcggcctca actgcgtcaa gggctatttc ctgtccaaga tcatgtatgg
      301 ggccgatcgc ctgacgcagc cgctgatgcg catgcggggc ggcgagttcg ccaaggacgg
      361 ccagttccag cccgtctcat gggaccgcgc cttcgacgag atggcgcggc agttcaagcg
      421 tgtcctgaag gagaagggac cggacgcggt cgggatgttc ggctccgggc aatggacgat
      481 ctgggaggga tacgcggcat cgaagctgat gcgcgcgggc ttccgcacca acaacctcga
      541 ccccaacgcg cgccattgca tggcgtctgc ggccgtcacc ttcatccgca cgttcggcat
      601 ggacgagccg atgggctgct acgacgattt cgagcacgcc gacgccttcg tgctgtgggg
      661 ctcgaacatg gccgagatgc acccgatcct ctggacgcgg gtgaccgagc ggcggctgtc
      721 cacgccggcc acgaaggtgg ccgtactgtc ggtctacgag caccgcacga ccgacctgtc
      781 cgacatcccc gccatcttca agccaggcac ggatctcgcc gtcctcaatt acatcgccaa
      841 ttacttgatc cagaatggcg cggtgaagcg cgacttcgtc gagaaacact gcaacatccg
      901 catggccaat accgacatcg gttacggcct gcgtccggag cacgtgctcg agcagcgcgc
      961 gcagcacgtc aacgacgcgc aggtttcgca tccgtcggac ttcgacgcct acgccaggct
     1021 gatgagcgaa tataccgtcg acaaggtgtc ggagctgtcg ggcgtctcga aggaaaagtt
     1081 ggaggcgctg gccaagctct atgccgatcc gaagaccaag gtcatgtcgc tttggaccat
     1141 gggtttcaac cagcacgtcc gcggcgtgtg ggccaatcac atggtctaca acctgcatct
     1201 tctcacgggc aaaatctccg agcctggcaa cagcccgttc tcgctgaccg ggcaaccctc
     1261 ggcctgcggc acggcgcgcg aggtcggcac cttctcgcac cggctgccgg ccgacatgca
     1321 ggttgccaat ccggagcatc gcaagcacgc cgagcacatc tggaagcttc cggacgggct
     1381 tctgtccggc aaggtcggct accacgccgt gcagcaggac cgcatgctga aggatggcaa
     1441 gctcaacgcc tactggatca tgtgcaacaa caacctccag acggcgccga acaccaacag
     1501 cgagacctat ccgggctatc gcaacgccgg caatttcgtg gtcgtctcgg atgcttatcc
     1561 gaccgtaacc gccatggccg ccgacctgat cctgccgacg gccatgtggg tcgagaagga
     1621 gggcgcctac ggcaatgccg agcgccgcac ccacttctgg caccagctcg tcaacgcacc
     1681 tggcgacgcg cgctccgacc tgtggcagct cgtcgaattc tcgaagcgct tcaccaccga
     1741 cgaagtctgg cccgcggaca tcctcgacaa ggccccggac tacaagggca agtcccttta
     1801 cgacgtcctc ttcgccaacg gcgaggtgaa caagttcccg gtctcggaac tcgatcccgc
     1861 ttacgagaac catgaagcca agcacttcgg cttctacgtg cagaagggcc tgttcgagga
     1921 atacgcctcg ttcgggcgcg gccacgggca cgacctcgcg cccttcgaca cctatcatca
     1981 ggtccgcggc ctgcgctggc cggtggtcga cggcaaggag acgctctggc gctaccgcga
     2041 aggccacgac ccctatgtgg agaaaggcgc cgggcttcag ttctacggca acccggacaa
     2101 gaaggcgaac ctcattgcgg cgccttacga gccgccggcc gaggcgccgg acaaggaatt
     2161 cgatctgtgg ctggtcacgg ggcgcgtcct cgaacactgg cattccggct cgatgacctt
     2221 gcgcgtgccc gagctctaca aggccttctc cggagccgtg ctgttcatgc atccggacga
     2281 cgccgccagg cgcggcctgc gccgtgggca ggaggtgcgg atcacgtcgc ggcgcggcga
     2341 gatccgttcg cgcgtcgaga cgcaggggcg caaccgcatg ccgcccggcg tggtgttcgt
     2401 gccgttcttc gacgccagcc agctgatcaa caaggtgacg ctcgacgcca ccgacccgat
     2461 ctccaagcag accgacttca agaaatgcgc cgtcaaggtg agcgcggtca gcgtggccca
     2521 gagcgcgccg gcgcggggag gcacgcgatg aagcgcatcg ccttcttgtc cgcgcttgcc
     2581 ggctttccgt gtctcttcgc cggggcgctg ttcgcgcagc agatcggcgg gcccgcgctc
     2641 gatgcgccgc gcctcaaggg gccggagccg ttcacgcgcg agacgccggc tcccgccatg
     2701 cagcggcaga tcaccgacga cgtgcgccgc cggcgcaatt atccggacca gccgccgctg
     2761 atcccgcacg ccatcgaggg ctacgcgctc gacctgaacg ccaacaagtg cctgtcgtgc
     2821 cactcgcgcc gcttcaccga gcagagccag gcgccgatga tcagcgtcac gcattatcag
     2881 gatcgcgacg ggaattttct gggcggcgtc tcgccgcggc gctacgcatg cctcgcctgc
     2941 catgtcccgc agacgatggc gccgccgctc gtcgagaacc gcttcatgga catggatgcg
     3001 cttgtccagc ccgaacggcg gggcaggtga catggccacg attgcgacgc gcctcaccga
     3061 atcgtggctg gggcggatgg tgcgccaggc gttcacgccg gcgcgcacac tcagcctcgc
     3121 cttcctgacc ctgggcggct tcgtcgcggg cgtcgtcttc tggggcggct tcaacaccgt
     3181 tctcgaggcg acgaacaccg agaccttctg caccagttgc cacgagatga agaccaacgt
     3241 gttcgaagag ctgaagggga ccatccacta cgccaaccgt tccggcgtgc gcgccacctg
     3301 tcccgactgt catgtcccgc acaactggac cgacaagatc gcgcgcaaga tgcaggcgtc
     3361 gaaggaagtc tggggccaca tcttcggctc gatcagcacg cgcgagaaat ttctggccct
     3421 gcgccggcat cttgccgagc gcgaatggga gcgcatgaag gcgaacgact cgctcgagtg
     3481 ccgcaactgc cactcggcgg aatccatgga cctcgccaag cagaacccgc gcgccgcggg
     3541 catgcacgag aaattcctgt tcacgggcga gcgcacgtgc atcgactgcc acaaaggcat
     3601 cgcgcaccgc ctgcccgaca tgtcgggcgt gccggggtgg caatgatggc atctccacat
     3661 caccttgcgc tgcggcgcgc gttgcggatc gctgcgggag ccgccctgtc agcatcggcg
     3721 ctgtcgacga gctttcaccc ggtcgcggcg cagccggcgg cgaccgcacc ggcaccccaa
     3781 gcgatcgatc cggccacctt cgtgcgggtg gtgcgcagcc tcgccatcct ccaggccagg
     3841 gccgccgagc acgccgcgtc ccgggagacc cgcccggaga cgcgcgcttt cgcgcaaaaa
     3901 atggcagcgt tccgcggcga gcagcttccg aagctcgacg ctgtcgcgcg cgagcgtcag
     3961 gtcgccgttg gcgcggtgct ggagttcgag catcaggtga tcctggagaa cctgcagccg
     4021 ctcgattccc tggaactgag ccgccgttac gccgaactcc agctgcaggc gctggagcag
     4081 gagatccgcg cctatggtgc cgcggaacgc gcgccggacg agcggctgag gggatatgcc
     4141 gccgagttgc ggccgcggct cgagcagctt ctcgaggaag cccgcgcgat gcggcaagcc
     4201 gtcggcccct gagcgggatg gacgacaggg aggtgcggca ctatacggct cgccgcaggg
     4261 gttgccggcc cttcttttc
//
LOCUS       DATAIQ010000203         4254 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_143430, whole genome shotgun sequence.
ACCESSION   DATAIQ010000203 DATAIQ010000000
VERSION     DATAIQ010000203.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4254)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4254)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4254
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_143430"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..895
                     /locus_tag="VHN20_03530"
     CDS             <1..895
                     /locus_tag="VHN20_03530"
                     /EC_number="1.13.12.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012336119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016703 - oxidoreductase activity, acting
                     on single donors with incorporation of molecular oxygen,
                     incorporation of one atom of oxygen (internal
                     monooxygenases or internal mixed function oxidases)
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HEX2724874.1"
                     /translation="QEFRASSNGAVQLNIWIPDPAPVRDAAREAQVREFLGGWGPAVP
                     PDAGDAPLQDFHAQCEAMLAAGAPILSSVMGLYPPGMVARMKERGIAWFAVVSTVAEA
                     IEAEAAGADVIIAQGAEAGGHRAAFDADGAERRAIGLFSLLPAVVDAVRVPVVATGGI
                     ADGRGVAAALTLGASAAQVGTAFLRAPEAKTNAAWADALARTRPEDTMITRAFSGRPG
                     RAIATAYALAASAADAPPPAPYPIQRALTATMREAGAKAGDVQRMQAWAGQSAALARA
                     EPAGDVVRRLWAEACALLPGR"
     gene            complement(1019..2308)
                     /locus_tag="VHN20_03535"
     CDS             complement(1019..2308)
                     /locus_tag="VHN20_03535"
                     /inference="COORDINATES: protein motif:HMM:NF018513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HEX2724875.1"
                     /translation="MISFLLTLLLATMLLGMPILLCIALIGFIGIALLPELVMPLFAQ
                     KMFGQLDSFTLLAMPYFILAGSIMTAGGISKQLVDFARALVGHFRAGLAHASIVASMA
                     LSGVSGSSTADAAAIGSIVIPTMKQTGYKAGFAAALIATAGTIGAIIPPSMTMVIYGA
                     IAQVSIGGLFLGGIIPGILVGIALMVTVTLYTYHPNYPELRRVTGRFDLCALWLSLRS
                     AWSGLLAPLIIVGGILSGVFTATEAGVVACVYAFVIGYFVERKIRLADLGGILVDAAI
                     TTAMVSGIIAVSGPMGWLLAYLQFNDIALAFVTSLSQSPTVVLLIIALVMLVLGTFVD
                     SLIVLLVFAPVAISISKTYGLDVYQVGLVMVMCNQIGAVSPPTAPLLFVTTSIARTPI
                     DQTNKHVWTFMLAETVVLVLVILFPGLSSWIPTYFLG"
     gene            complement(2305..2793)
                     /locus_tag="VHN20_03540"
     CDS             complement(2305..2793)
                     /locus_tag="VHN20_03540"
                     /inference="COORDINATES: protein motif:HMM:NF016200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HEX2724876.1"
                     /translation="MKVIFGAIDRAVEILVATIFAAMVAVGFFQVFSRFVLNATPSWS
                     EEIQIFGHIWLVFLAIPIAYRRGAHFAVEAIRRQYSLGMHRIFDLMVEIMWAGFAVTT
                     AYYSYRVSLVAGRNVSPGLEIPMSYPYYGMIVGGVYLLFVVMRRVAGEPPPVEPPEPP
                     AS"
     gene            complement(2960..3964)
                     /locus_tag="VHN20_03545"
     CDS             complement(2960..3964)
                     /locus_tag="VHN20_03545"
                     /inference="COORDINATES: protein motif:HMM:NF015445.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HEX2724877.1"
                     /translation="MRPIKQWMAAALIATAALAMTTVAAGAQSKKTIRINHAGADDIL
                     GTEHQMFSWIFANYVNQRAPTLDVRIFPNSGLGQSRQVIEAMQLGSGASMHVGGMAEF
                     ANFCQSRCGVIGLPFIFKGYDHVQRVLDGPVGGALSAELEKAGFKTLGYMYSWGYRNV
                     VTARKEIKTVADLKGLKIRTIPTPVFVGAINAMGASATPMNFGEVYTSLQSGVLDGFE
                     HTASTTLSFKFHEIAKYVAITQHLIDPTVVAFSNSEWSRLDAKEQAVVMEGARLAIDI
                     ARAMSSVREAESLAQLKKLGMTITYPDMTEARARAADVQKEMAAKLKAEDLLAQILAQ
                     "
BASE COUNT          757 a         1384 c         1454 g          659 t
ORIGIN      
        1 gcaggagttc cgcgcgtcga gcaacggcgc cgtccagctc aacatatgga tcccggaccc
       61 ggcgccggtc cgcgacgccg cgcgcgaggc gcaggtgcgg gagttcctcg gcggctgggg
      121 gccggcggtg ccgcccgacg cgggcgacgc gccgctccag gattttcacg cgcagtgcga
      181 ggccatgctc gccgccggcg cgccgatcct gtcgtcggtg atgggcctct atccgcccgg
      241 catggtggcg cgcatgaagg agcgcggcat cgcctggttc gccgtcgtga gcaccgtcgc
      301 cgaagcgatc gaggcggaag cggccggcgc cgacgtcatc atcgcgcagg gcgccgaggc
      361 cggcggtcac cgcgccgcgt tcgatgccga cggcgccgag cggcgcgcca tcggcctgtt
      421 ctccctgctg cccgcggtcg tcgatgcggt gcgcgtgccg gtcgtcgcca cgggcggcat
      481 cgccgacggg cgcggcgttg ccgcggcgct gacgctgggc gccagcgcgg cgcaggtcgg
      541 caccgccttc ctgcgcgctc ccgaggcgaa gaccaacgcc gcctgggcgg acgcgctggc
      601 gcgcacgcgg cccgaggaca cgatgatcac gcgcgcattc agcgggcgtc cgggccgggc
      661 gatcgccacc gcttatgcgc tcgcggcgag cgccgcggac gcgccgccgc cggcgccgta
      721 tccgatccag cgcgccctca ccgcaacgat gcgcgaggcc ggcgccaaag ccggcgatgt
      781 gcagcgcatg caggcctggg ccggccagtc cgctgcgctg gcgcgcgccg agccggccgg
      841 cgacgtggtg cggcgcctct gggccgaggc gtgcgcgctg ctgccgggcc ggtagaacat
      901 gatgccgcaa agtggctcgc gcgtcgcttc gcacagatcg gccggcagcc gcgcttgcac
      961 gtcggggtgg gctgcatgcg cggagaccat gacgagaccg ctgccacgcc gaccttcgct
     1021 atccgaggaa gtatgtcggg atccatgacg acagcccggg aaacaggatc accagcacca
     1081 acacgaccgt ttcggcgagc atgaaggtcc agacgtgctt gttggtctga tcgataggcg
     1141 tcctggcgat gctggtcgtc acgaacagca acggagctgt cggcggcgag acggcgccga
     1201 tctgattgca catcaccatg acaaggccga cctgatagac gtcgagcccg taagtcttgc
     1261 tgatgctgat cgcgaccggc gcaaagacga ggaggacgat cagcgaatcg acgaaggtgc
     1321 cgagcaccag catgaccagc gcgatgatca ggagaaccac ggtggggctc tgcgacaacg
     1381 aggtgacgaa cgcgagggcg atgtcgttga attgcaggta ggccagcagc cagcccatcg
     1441 gcccggacac ggcgatgatg ccggacacca tcgccgtcgt gatcgcggca tctaccagga
     1501 tgccgccgag atctgcgagc ctgatcttgc gctcgacgaa gtagccgatg acgaaggcat
     1561 agacgcacgc gacgacgcca gcctcggtcg ccgtgaagac gcccgacagg atgccgccga
     1621 cgatgatcag cggcgccagc agcccggacc acgcggagcg gagggacaac cacaaggcac
     1681 acaggtcgaa gcgcccggtg acgcggcgca gttccgggta gttcggatgg taggtgtaga
     1741 gcgttaccgt gaccatcagc gcgatgccga cgaggatgcc gggaatgatc ccgccgagga
     1801 agagcccgcc gatcgacacc tgggcgatag ccccataaat gaccatcgtc atgctcggcg
     1861 gaatgatcgc tccgatggtg cccgcggtgg cgatcagggc ggcggcaaag cccgccttgt
     1921 agccggtctg cttcatggtc gggatgacga tcgagccgat ggccgccgcg tccgcggtgg
     1981 acgagcccga cacgcccgac aaggccatgc tggcgacgat ggaggcatgc gccaggccgg
     2041 ctcggaagtg cccgaccagc gcgcgggcaa agtcgaccag ctgcttgctg atgccgccgg
     2101 ccgtcatgat cgagccggca agaatgaagt agggcatcgc cagcagcgtg aacgagtcga
     2161 gctgcccgaa cattttttgc gcgaacagcg gcatgaccag ctcgggcaga agtgcaatgc
     2221 cgatgaagcc gatcagggcg atgcaaagca ggatcggcat cccgagcagc atcgtcgcca
     2281 ggaggagcgt cagcaggaag ctgatcatga cgctggcggc tccggtggct ccaccggcgg
     2341 cggctcgccg gcgacgcggc gcatgacgac gaacagcagg tacacgccgc cgacgatcat
     2401 gccgtaatag ggatagctca tcgggatttc gagcccgggc gatacgttgc gaccggccac
     2461 gagtgagacg cggtagctgt aataggccgt ggtgaccgcg aacccggccc acatgatctc
     2521 gaccatcagg tcgaaaatcc tgtgcatgcc gagcgagtat tggcgtcgga tcgcctcgac
     2581 ggcaaagtgg gcgccgcgcc gataggcgat cgggatcgcc agaaacacga gccagatatg
     2641 cccgaagatc tggatctcct cgctccagct cggcgtcgca ttcagcacga aacggctgaa
     2701 gacctgaaag aagccgaccg cgaccatcgc ggcgaagatc gtcgccacca gaatttcgac
     2761 ggccctgtcg atcgcgccaa agatgacttt catgcggccg ccaaacgcgt tgacccttgt
     2821 ccacgcaggg cctttcgcca ttttcggaga ggttgcgagc ggcgtgcgga caggcttcgc
     2881 cggatcggcg cttcgagacc agcggagcgc acgccgcggc gacgatggcc cggcccgccg
     2941 gggccgctga ccggtcgcat cactgtgcga ggatctgcgc caggaggtct tcggccttga
     3001 gcttcgccgc catctccttc tgcacgtcgg cggccctggc gcgcgcttcc gtcatgtcgg
     3061 gatacgtgat tgtcatgccg agcttcttga gctgtgccag gctctccgcc tcgcgcacgg
     3121 aggacatggc gcgggcgatg tcgatcgcca gcctggcgcc ctccatgacc accgcctgtt
     3181 ccttggcgtc gagcctgctc cactcgctgt tggagaacgc gacgacggtc ggatcgatca
     3241 ggtgctgggt gatggccaca tatttggcga tctcatggaa cttgaacgac aaggtcgtcg
     3301 aggcggtatg ctcgaacccg tccaggaccc cgctctgcag cgaggtatag acctcgccga
     3361 aattcatcgg cgtcgctgac gctcccatgg cgttgatggc ccccacgaaa accggcgtcg
     3421 gaatggttct gatcttcagg cccttgaggt cggcaacggt cttgatctcc tttctggcgg
     3481 tcacgacgtt gcggtaaccc cacgaataca tgtagccgag cgtcttgaag ccggctttct
     3541 cgagctccgc cgacagagcc ccgccgaccg gcccgtcgag cacgcgctgc acgtggtcgt
     3601 agcccttgaa gatgaagggg agcccgataa cgccgcatct cgactgacag aaattggcga
     3661 attcggccat gccgccgaca tgcatgctcg cgcccgagcc gagctgcatc gcctcgatca
     3721 cctgccggga ctggccgagg ccgctattgg gaaagattct cacgtcgagc gtcggcgccc
     3781 tctggttgac gtaattggcg aaaatccagg agaacatctg atgctcggtg ccgaggatgt
     3841 cgtcggcgcc ggcgtgattg atgcggatgg ttttcttgct ctgcgcgcca gccgccaccg
     3901 tcgtcatcgc gagcgccgcc gtcgcaatga gcgcggcggc catccattgc ttgatcggtc
     3961 tcatgtctcc ctcccttggt cattgatctt gtgcacggtt gtcgccggac gatcccgcgc
     4021 cgtctcgtgg cgcaggcgtc aacctgcggg tccggggtcg atgcgaacgg gacaagagcg
     4081 gcgcgagaag agggggcgtt caggcgagca gcgcatgcgt cgcctgttcg gcttctaccg
     4141 gctcgctctc gggcatagct cacgacggaa ccgctcatcg aatagcagcg ggctccgggc
     4201 atcagagcac tatagcaaag ctcagacaag ccgcgtccgg aacgaggccg ttcg
//
LOCUS       DATAIQ010000204         4240 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_425627, whole genome shotgun sequence.
ACCESSION   DATAIQ010000204 DATAIQ010000000
VERSION     DATAIQ010000204.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4240)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4240)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4240
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_425627"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..356)
                     /locus_tag="VHN20_03550"
     CDS             complement(<1..356)
                     /locus_tag="VHN20_03550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008531404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX2724878.1"
                     /translation="MKYSGFALLAQALRGNKHWPPVWRDPEPKPAYDVVIVGGGGHGL
                     ATAYYLAKEHGITKVAVVEKGWLGSGNVGRNTTIVRSNYLLPGNIPFYEWSMKLWEGL
                     EQDINYNAMVSQRGVL"
     gene            617..1663
                     /locus_tag="VHN20_03555"
     CDS             617..1663
                     /locus_tag="VHN20_03555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008127484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homocysteine S-methyltransferase family protein"
                     /protein_id="HEX2724879.1"
                     /translation="MKKGLLQRLEAGPVICAEGYLFELERRGYLQAGAYVPEVVLDFP
                     EQVENLHRDFLRAGSDVIEAFTYYAHREKLRLIGREGDLEPMNRQALAIARKVAAEGD
                     ALVAGNICNTNVFKAGDTEAARQVRQMYEEQVGWAVDAGVDFIIAETISWLGEAEIAL
                     DVIRQTKLPAVVTFALHKQDKLRDGFKPGEAARRIADLGADVVGLNCIRGPRTMMPFV
                     EEIRSAVSIHVAALPVPYRTTRAEPTFESLTEKEADCACCIPDGRSFPVALDPFQATR
                     YEIAEFGRKAYGMDVRYLGVCCGAGPHHVRALAEALGRKPPASRFSPDMSKHYSLGTD
                     PRLKQENREYAKNL"
     gene            complement(1679..3097)
                     /locus_tag="VHN20_03560"
     CDS             complement(1679..3097)
                     /locus_tag="VHN20_03560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008124528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic ring-hydroxylating dioxygenase subunit
                     alpha"
                     /protein_id="HEX2724880.1"
                     /translation="MIFDAANLLRGGGRIERDSDIARSECDRTGRSASESASSRSDLS
                     RAARGKAPKIGTSRIIGERMQDRLQNLVAARRPGFGLAQAFYTDAAIFEADMQAVFAG
                     DWLFACNVCEIRNPGDYVTLTVGRQPLVVLRDRDGEVRSFHNVCRHRGSRLCSQERGH
                     ANRLVCPYHQWVYELDGRLRTARQMPKDFATSAYGLKAVRAEVICGLIYVSLADDPPS
                     LDGFRAAVTPYIAPHQPHRTKLAFESTIVEKANWKLVIENNRECYHCAANHPELLASL
                     VEFALPDDPRATAAFKDVMDRAAAKWDACGLPHRPADGGDEFRCIRLPFHDGAVSFTM
                     DGRPACGKLLGGLADADLGSVRMFRAPNNWHHFLADHIVHFRVLPIAPDRTAVRTTWL
                     VHEDAIEGVDYDVERLSEVWLATNDQDRRLVENNHLGIMSMAYEPGPYVPSEFMLEQF
                     SSWYAAKMRAFAAGPTRLTAAE"
     gene            3119..>4240
                     /locus_tag="VHN20_03565"
     CDS             3119..>4240
                     /locus_tag="VHN20_03565"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEX2724881.1"
                     /translation="MPLPEKARYVVIGAGIHGLSTAYHLARQLQAKGRGSEADIVVLD
                     KTRVGAGASGIACGVVRNNYFQPAMRELMAHSVSVWESDPETYHYHGVGYMQISPEVM
                     HAGVASIYAQQQAIGYQSVFVEGADDCTRYMKGLFDDWQARGITSVLHEKRGGYANNT
                     ASLRGLAAKAVAAGVRVLEGVRVTGFEFGHNSQAVAAVLTDKGRIECDFVAAGAGPWV
                     RDIWSMLDLPKTVSIKGRDGVMHHDVPMWRFWQLEEGVLGVEPDYLKTNDGRMPPVIH
                     VDTDAPLYSDRTGELITDELWGIYYKPDFHFDGVQGGAMPYKVETPVDEVAIDPYGPD
                     SPEMVASDAFADMWSSALAFCHKRFEGKSGLYRDEKSGGI"
BASE COUNT          698 a         1397 c         1444 g          701 t
ORIGIN      
        1 ttgaggacgc cgcgctggct gaccatggcg ttgtagttga tgtcctgctc gagtccctcc
       61 cacagcttca tcgaccattc gtagaacggg atgttgccgg gcaggagata gttcgagcgc
      121 acgatcgtgg tgttgcggcc gacattgccg gacccgagcc agcctttctc gacgaccgcg
      181 accttcgtga tgccatgctc cttggcgagg taataggcgg tggcgagccc gtgcccgccg
      241 ccgccgacga tgacgacgtc gtaggcgggc ttcggctcgg gatcgcgcca gaccggcggc
      301 caatgcttgt tgccgcgaag ggcctgggca aggagggcga aaccggaata tttcatcggc
      361 cgagaacccg gccgctggtg cgcctgcacc gtggccgatg gcagggggtt gcagccaaag
      421 tcatcgccga ggcacctgtc gtgctcacgt cgggaaacga catggacaac ctggaaagcg
      481 acatcggcgc ggcatcgtgg aagcgcccgc gaggtgtcgc aattcgcgcc ggcggcgtcg
      541 cattcggccc gatcatggcg cggcctttcg ccggatgatc ccgctgcgcc ggcgcgcgcc
      601 atgaggggag gggacgatga agaaaggcct gctgcaacgg ctcgaagcgg gcccggtcat
      661 ctgcgccgag ggctacctgt tcgagctcga gcgacgcggc tacctgcagg ccggcgccta
      721 tgtgcccgag gtggtgctcg acttccccga gcaggtcgag aacctgcacc gcgatttcct
      781 gcgcgccggc tccgacgtca tcgaggcctt cacctattat gcccatcgcg aaaagctccg
      841 cctgatcggg cgcgagggcg atctcgaacc catgaaccgc caggcgctcg ccatcgccag
      901 gaaagtcgcc gccgagggcg acgccctcgt cgccggtaat atctgcaaca ccaacgtgtt
      961 caaggccggc gacaccgagg ccgcgcggca ggtgcgccag atgtacgagg agcaggtcgg
     1021 ctgggcggtc gacgcgggcg tcgatttcat catcgccgag acgatctcct ggctcggcga
     1081 ggccgagatc gcgctcgacg tgatccggca gacgaagctt ccggccgtgg tcactttcgc
     1141 gctgcataag caggacaagc ttcgcgacgg cttcaagccg ggtgaggccg ccaggcggat
     1201 cgccgatctc ggcgccgacg tggttggcct caactgcatc cgcggcccgc gcaccatgat
     1261 gcccttcgtg gaggagatcc gctcggctgt gtcgatccat gtcgcggcgc tgccggttcc
     1321 gtatcgcacg acgcgggccg agccgacctt cgaatcgctg accgagaagg aggcggactg
     1381 cgcgtgctgc atcccggacg ggcggtcctt cccggtcgcc ctcgatccat tccaggcgac
     1441 ccgctacgag atcgccgagt tcggccgcaa ggcctacggc atggatgtgc gctatctcgg
     1501 tgtctgctgc ggagccgggc ctcaccacgt ccgcgcgctt gccgaggcgc tcggccgcaa
     1561 gccgccggcg agccgcttct cccccgacat gtcgaagcat tattccctcg gcaccgaccc
     1621 gcggctgaag caggaaaacc gcgaatacgc gaagaatctg tagctttcgc cggttccgct
     1681 actcagcggc cgtgaggcgc gtcggccctg ccgcaaaggc gcgcatcttg gcggcgtacc
     1741 agctggagaa ctgctcgagc atgaactcgg acgggacgta ggggccgggc tcgtaagcca
     1801 tcgacatgat gccgagatgg ttgttctcga cgaggcgccg gtcctggtcg ttggtggcga
     1861 gccagacctc cgagaggcgc tcgacgtcgt agtcgacccc ttcgatcgca tcctcgtgga
     1921 cgagccacgt cgttcgcacc gccgtccggt cgggcgcgat cggcagcacg cggaaatgca
     1981 cgatgtggtc ggcgaggaag tggtgccagt tgttcggggc gcggaacatg cgcaccgacc
     2041 cgagatcggc atcggcaagt ccgccgagaa gttttccgca ggcaggacgc ccgtccatgg
     2101 tgaaggagac ggcgccgtcg tggaacggca gccggatgca gcggaattcg tcgccgccgt
     2161 cggccggccg gtgcggcagg ccgcacgcgt cccacttggc cgcggcccgg tccatcacgt
     2221 ccttgaaggc cgccgtggcg cgcgggtcgt ccggcagcgc gaactccacg aggctggcca
     2281 ggagctcggg atggttcgcg gcgcagtgat agcactcgcg gttgttctcg atcacgagct
     2341 tccagttcgc cttctcgacg atggtcgatt cgaaggcgag cttggtccgg tgcggctgat
     2401 ggggcgcgat gtagggcgtc accgcggccc ggaagccgtc gagcgacggc ggatcgtcgg
     2461 cgagcgacac atagatgagg ccgcagatca cctcggcccg gacggctttc aggccgtatg
     2521 ccgacgtcgc gaaatccttc ggcatctggc gtgcggtgcg cagcctgccg tcgagctcgt
     2581 agacccattg gtggtagggg cagaccagcc ggttcgcatg gcctcgctcc tgtgagcaaa
     2641 ggcgcgagcc gcggtgccgg cagacgttgt ggaaggatct gacctcgccg tcgcgatcgc
     2701 gcaggacgac gagcggctgc ctgccgacgg tgagcgtgac gtagtcgccc ggattcctga
     2761 tctcgcagac gttgcaggcg aacagccagt cgccggcgaa gacggcttgc atgtccgcct
     2821 cgaagatcgc ggcgtccgtg tagaaggctt gcgccagccc gaagccgggc cggcgcgcgg
     2881 cgacgaggtt ttgcaggcgg tcttgcatcc gttcgccgat gatcctggac gtgccgatct
     2941 tcggcgcttt gccgcgcgcc gcacgagaca aatccgaccg gctcgaggcg ctttccgacg
     3001 cgctcctgcc cgtgcggtcg cattccgacc gggcgatgtc ggaatcgcgt tcgatccggc
     3061 cgccgccgcg tagcaggttc gcggcatcga agatcaactc ctttccggag tcatgcgaat
     3121 gccacttccc gagaaggcgc gttacgtcgt gatcggcgcc ggcatccacg gtctctcgac
     3181 cgcgtatcat ctggcccgcc agctgcaggc gaaagggcgc gggtcggagg cggacatcgt
     3241 cgtcctggac aagacgcgcg tgggagccgg cgcctcgggc atcgcctgcg gggtcgtgcg
     3301 caacaactac ttccagcccg ccatgcgcga gctgatggcc cactccgtgt cggtgtggga
     3361 gagcgatccc gaaacctacc attatcacgg cgtcggctac atgcagatca gccccgaggt
     3421 gatgcacgcg ggcgtcgcct cgatctatgc ccagcagcag gcgatcggct accaatcggt
     3481 gttcgtcgag ggcgccgacg actgcacgcg ctacatgaag ggcctgttcg acgactggca
     3541 ggcgaggggg atcacctccg tcctccatga gaagcgcggc ggctacgcca acaacacggc
     3601 ctccctgcgc ggcctcgccg ccaaggccgt cgccgccggc gtccgcgtcc tcgaaggcgt
     3661 gcgcgtcacc ggcttcgagt tcggccataa cagccaggcg gtggccgcgg tgctgaccga
     3721 caagggccgc atcgaatgcg atttcgtggc ggccggcgcc gggccctggg tgcgcgatat
     3781 ctggtccatg ctcgatctgc ccaagacggt ctcgatcaag ggccgcgacg gcgtcatgca
     3841 tcacgacgtg ccgatgtggc ggttctggca gctcgaggaa ggcgtgctcg gcgtcgagcc
     3901 cgactatctc aagaccaatg acgggcgcat gccgcccgtc atccacgtcg acaccgacgc
     3961 gccgctctac tccgaccgca ccggcgagct gatcacggac gagctgtggg gcatctatta
     4021 caagcccgat tttcatttcg acggcgttca gggcggcgcc atgccctaca aagtcgagac
     4081 gcctgtcgac gaggtcgcga tcgaccctta cgggcccgac agtcccgaga tggtcgcttc
     4141 cgacgccttc gccgacatgt ggagctcggc gctcgccttc tgccacaagc gcttcgaagg
     4201 caagtcgggc ctctatcgcg acgaaaaatc aggcggcatc
//
LOCUS       DATAIQ010000205         1594 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_102681, whole genome shotgun sequence.
ACCESSION   DATAIQ010000205 DATAIQ010000000
VERSION     DATAIQ010000205.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1594)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1594)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1594
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_102681"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1509)
                     /locus_tag="VHN20_03570"
     CDS             complement(<1..1509)
                     /locus_tag="VHN20_03570"
                     /EC_number="4.2.1.82"
                     /inference="COORDINATES: protein motif:HMM:TIGR03432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjhG/YagF family D-xylonate dehydratase"
                     /protein_id="HEX2724882.1"
                     /translation="MPDASQAAAILDSQDAALFDVHTRTRGPEGALPLTPEMLLTRPS
                     GDLFGLTQSAGMGWDPAKLTGREILLLSTHGGLRAPDGTPIALGYHTGHWEVGLLVQA
                     AAEQLKALDAVPFAGYCTDPCDGRSQGTPGMFDSLAYRNDAATVFRRLIRSLPTRRGV
                     IGVATCDKGLPAMMMALAAMHDLPCVLVPGGVTLLPEEGEDAGRIQTIGARFAHGQIT
                     LEEAADLGCRACASPGGGCQFLGTAATSQVVAEALGVALTHSALAPSGHPVWLDMARR
                     SARAVLSLESRGLSMRDIITSDAVHNALMTHAAFGGSTNLIMHLSAVAHAAGVRRPTV
                     DDWSRANREAPRLVDALPNGPRNHPTVQVFQAGGVPEVMLHLRRAGLLRTRALTVAGI
                     TLDEALDWWEQSERRHTLRRRLLERDGVDAADVIMDPATAASRGLTSTVCFPSGNLAP
                     EGSVIKSTAIDPSVVGADGIYRKSGPARIFTTEPAAIHAIKSGAIQAGDILVL"
BASE COUNT          242 a          445 c          673 g          234 t
ORIGIN      
        1 gagcacaagg atgtcgcccg cctggatggc gccgctcttg atggcgtgga tggctgccgg
       61 ttcggtggtg aagatgcgcg cgggtcctga cttgcggtag atgccatcgg cgccaacgac
      121 ggaggggtcg atggcggtgc tcttgatgac ggagccttcg ggcgcgaggt tgccggacgg
      181 gaagcagacg gtcgaggtga ggccgcggct cgcggcagtc gcggggtcca tgatgacgtc
      241 ggcggcgtcg acgccatcgc gctcgagcag gcgtcggcgc agagtgtggc ggcgctcgga
      301 ctgctcccac cagtcgaggg cttcatcgag ggtgatgccg gcgacggtga gggcgcgggt
      361 gcgaagcagt ccggcgcggc ggaggtggag catgacctcg gggacgccgc ccgcctggaa
      421 gacctggact gtcgggtgat tgcgcgggcc gttcggcagt gcgtcgacca gacgcggggc
      481 ttcgcggttg gcacgcgacc agtcatcgac agtggggcgg cgcactccgg cggcgtgggc
      541 aacggcgctg aggtgcatga tgaggttggt cgatccgccg aaggccgcgt gcgtcatgag
      601 ggcgttgtgc acggcgtcgg aggtgatgat gtcgcgcatg gagaggccgc gggattcaag
      661 cgagaggaca gcgcgggcgg aacgccgggc catgtcgagc cagacagggt gtccggatgg
      721 cgcgagcgcg gagtgggtga gagccacgcc gagggcctcg gcgacgactt gcgaagtggc
      781 ggcggtgccg aggaactggc agcctccgcc aggggacgcg caggcgcggc agccgaggtc
      841 ggcggcctct tcgagcgtga tctggccgtg ggcaaagcgc gcaccgatgg tctggatgcg
      901 gccggcgtcc tcgccttctt cgggcaggag cgtgacaccg ccggggacga gcacgcaggg
      961 cagatcgtgc atggcggcga gcgccatcat catcgcgggc agacccttgt cgcaagtagc
     1021 gacgccgatg acgccgcggc gggtggggag cgaacggatc aggcggcgaa acacggtggc
     1081 ggcgtcgttg cgatacgcga ggctgtcgaa cataccgggc gtgccctgcg agcgtccgtc
     1141 gcaggggtcc gtgcagtagc cggcgaaagg aacggcatcg agcgctttga gttgctcggc
     1201 ggcggcctgg acgaggagtc cgacctccca atgtccggtg tgatagccga gggcgatagg
     1261 cgtgccgtcg ggcgcgcgca gtccgccgtg ggtgctaagg aggaggatct cgcgtccggt
     1321 gagtttggca ggatcccagc ccatcccggc actctgggtg aggccgaaga ggtcgcccga
     1381 cggccgggtc aggagcattt cgggcgtgag ggggagcgcg ccctcggggc ctcgggtgcg
     1441 ggtgtggacg tcgaagagcg cggcgtcctg ggaatcgagg atggcggcgg cttgggaggc
     1501 gtcaggcatg agtgtggatc tcgtcaagga tgcggcgaag ttcggcggcg gggtcagcgg
     1561 cccgcgtgac ctggcggccg atgaccaggt agtc
//
LOCUS       DATAIQ010000206         2346 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_287674, whole genome shotgun sequence.
ACCESSION   DATAIQ010000206 DATAIQ010000000
VERSION     DATAIQ010000206.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2346)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2346)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2346
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_287674"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..681)
                     /locus_tag="VHN20_03575"
     CDS             complement(<1..681)
                     /locus_tag="VHN20_03575"
                     /inference="COORDINATES: protein motif:HMM:NF015562.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HEX2724883.1"
                     /translation="MQGHGAASHVLFGLDPLWVSTCLLVITYAVIVTERINRSIIALL
                     GAGLMVMVGVLDQQEAIRGIDFNTIGLLTGMMILVSISRRSGMFEFMAVWAAKKAKAH
                     PAGILFMLQMVTALLSALLDNVTTVLLIVPVTLSITRELKVPPYPYLFAEVFASNIGG
                     TATLIGDPPNILIGSLADLSFNQFVIHLAPICAVIMIVQAAMIHALWGKELKATPEAE
                     ARVMSLHAS"
     gene            complement(770..2185)
                     /locus_tag="VHN20_03580"
     CDS             complement(770..2185)
                     /locus_tag="VHN20_03580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002713580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:proton antiporter"
                     /protein_id="HEX2724884.1"
                     /translation="MASAALTALLAAAFALVPQAALAATLDGASLSIVWALPFAGILL
                     SIALGPLGFRHIWEHHYGKISALWALSVTVPLILAFGISAALQSVLHVLLHEYLPFIL
                     MLLALFTAAGGILVSGNLHGSPLTNTALLAIGTTLASVIGTTGASMVMIRPVIRANDN
                     RRHNVHVVVFFIFLVSNIGGSLTPLGDPPLFLGFLRGIDFFWTTTHLLQETLFLTGML
                     LAIFFALDSWMYRRDPPVPGRDPTPDDARVRVSGGINVVLIVVIVAAIVTSGTWRPDV
                     AFNVLGVEVELQNLVREATMVAVALASLVLTPREHRAENGFSWEPIKEVAKLFAGIFV
                     CIIPVLAMLDAGSRGVFAPVVALVSGPDGTPDNVAYFWLTGLLSSFLDNAPTYLVFFE
                     MAGGEPDRLMGPLASTLAAISMGAVFMGANTYIGNAPNFMVYAIARDMNVKMPTFFGY
                     MAWSAAILGPLFILLTLIFIP"
BASE COUNT          496 a          714 c          811 g          325 t
ORIGIN      
        1 ggaggcgtgc agggacatca cgcgcgcctc ggcttcgggc gtcgccttga gctccttgcc
       61 ccacagcgcg tgaatcatgg cggcctgcac gatcatgatg acggcgcaga tcggggcgag
      121 gtggatcacg aactggttga agctcagatc ggcgagcgaa ccgatcagga tgttgggcgg
      181 gtcgccgatc agcgtcgccg tgccaccgat gttcgaggcg aacacctcgg cgaacagata
      241 cggatagggc ggcaccttga gctcgcgcgt gatcgacagc gtcacaggca cgatcagcag
      301 aacggtcgtc acgttgtcga gcagcgccga caggagagcg gtcaccatct gcagcatgaa
      361 cagaatgccg gccgggtgcg ctttcgcctt cttggccgcc catacggcca tgaactcgaa
      421 catgcccgag cggcgcgaga tcgagacgag gatcatcatc ccggtcagga gcccgatggt
      481 gttgaaatcg atgccccgga tcgcctcctg ctgatcgagc acgccgacca tcaccatcag
      541 gcctgccccg agcagcgcga tgatggagcg gttgatgcgc tcggtgacga tgaccgcgta
      601 ggtgatgaca aggaggcacg tcgagaccca caacggatcg aggccgaaca ggacgtgcga
      661 cgccgcgccg tgaccttgca tcaatccccc tccccggtga acgcgccctt cgcgttcccg
      721 gaaccgggcg gcaaggtttc gaaccggatc gatcgagtca agccgccggt caggggatga
      781 agatgagcgt gagaaggatg aacagcggcc cgaggatcgc cgccgaccag gccatgtagc
      841 cgaagaaggt cggcatcttc acattcatgt cgcgcgcgat cgcgtagacc atgaagttcg
      901 gcgcgttgcc gatataggta ttggcgccca tgaagaccgc gcccatcgag atcgccgcca
      961 gcgtcgaagc gagcgggccc atcaggcggt ccggctcgcc tcccgccatc tcgaagaaca
     1021 ccaggtaggt cggggcgttg tcgaggaagg aggacaacag ccccgtgagc cagaaatagg
     1081 cgacgttgtc gggcgtgccg tcgggacccg agacaagcgc gacgacaggc gcaaacacac
     1141 ccctgctgcc ggcatcgagc atggccagca ccgggatgat gcagacgaag atcccggcga
     1201 aaagcttggc cacttccttg atcggctccc agctgaagcc gttttcggcg cggtgctcgc
     1261 gcggggtcag gaccagcgac gcgagggcga ccgcgaccat ggtcgcctca cgcaccaggt
     1321 tctgcagctc gacctcgacg ccgaggacgt tgaaggcgac gtccggccgc cacgtgccgc
     1381 tggtcacgat cgccgccacg atcacgacga tcaggacgac gttgatccct ccggaaacgc
     1441 gcacgcgcgc gtcatcggga gtcggatcgc gcccggggac gggcgggtcg cgacgataca
     1501 tccagctgtc gagcgcgaag aagatggcga gcagcatccc ggtcagaaac aaggtctcct
     1561 gcaacaggtg cgtggtcgtc cagaagaagt cgatgccgcg gaggaagccg aggaacagcg
     1621 gcggatcgcc gagcggcgtg agcgatccgc cgatgttgga aacgaggaag atgaagaaca
     1681 cgacgacgtg cacgttgtgg cgccggttgt cgttggcgcg gatcacgggc cgaatcatca
     1741 ccatcgacgc gccggtggtg ccgatcacgc tggcgagcgt ggtcccgatc gccagcagcg
     1801 ccgtgttggt cagcggcgag ccgtgcaggt tgcccgaaac gaggatgccc ccggctgcag
     1861 tgaacagcgc cagcagcatc aggatgaacg ggaggtattc gtgcagcagt acatgcagca
     1921 ccgactgcag ggcggccgag ataccgaagg ccaggatcag cgggacggta accgacaggg
     1981 cccacagggc ggaaatcttg ccgtaatggt gctcccagat gtgcctgaag ccgagcggcc
     2041 cgagggcgat cgagagcagg atgcccgcga acggcaacgc ccagacgatg gacagcgatg
     2101 cgccgtcaag agtggcagca agcgcggcct gggggacaag cgcgaaagcc gccgcaagca
     2161 gcgccgtcag agccgcagat gccacgggca aggtctcggt tgaggagggc gggacgccaa
     2221 gacagtccgg ccttacggaa aggcagagta gcacgcaacc cggccgtcga gtgcggggtg
     2281 ttaacgcttt gttcaaacgc atcagcgaat cgtaaagggc tgtcgagggc ggcgcggaga
     2341 ccgccc
//
LOCUS       DATAIQ010000207         2221 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_102780, whole genome shotgun sequence.
ACCESSION   DATAIQ010000207 DATAIQ010000000
VERSION     DATAIQ010000207.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2221)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2221)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2221
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_102780"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            249..974
                     /locus_tag="VHN20_03585"
     CDS             249..974
                     /locus_tag="VHN20_03585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012334228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="damage-inducible mutagenesis protein"
                     /protein_id="HEX2724885.1"
                     /translation="MTHAGRDPVVAELRARLDRLASSRRRSGVLPFGVAQIDRRLPGG
                     GLCLGALHEVAQAGPAHAYGALATLFIAGVAARLKGPVLWCLSSRDLFAPGLAAAGLH
                     PDRVIYAETGKDADVLPVMEEGLRHRGLAAVVGEVARTGLKSTRRLHLAAEKSGCTAL
                     LLQRWGEAAANRGSAAVTRWRIAPQPSREHPVPGLGRARWRLELVRVRGGEPASWIVE
                     ACDEKGRLAFSPDMADGPHPQTH"
     gene            910..>2221
                     /locus_tag="VHN20_03590"
     CDS             910..>2221
                     /locus_tag="VHN20_03590"
                     /inference="COORDINATES: protein motif:HMM:NF013015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase Y family protein"
                     /protein_id="HEX2724886.1"
                     /translation="MRRVVSLFLPTWPTDRIRRRTDLSRDKPLVTARKQGARRVVAAV
                     DEAARRHGLKPGMTVADAQTFVPDLTVTEADPSGDDAALAGLAAWAVRRYSPIASPDA
                     PDGILIDSTGCDHLFGGEHAMLADMHACLRRARISVRGAVADTPGAAHAVARVLADPI
                     RIVAQGGTEQALRPLPVAALRLPQEIVAGLFDLGFKEIGQVLDAPRSALAVRFGAVVG
                     QKLAWALGATPELVVPYVPEDLPRQRLVFAEPLASPASLERAARDLAKQIAADLERRA
                     MGARRLDLLFERVDNSIQAIRVGLAQASRNPDHLMGLLRGRLETIDPGFGIDAASLIA
                     AQVERLPSQQIATVLSDIAPETDISELVDRLASLPAVRQVLRFAPVESDLPQRSVQRL
                     QALAPPGGQTWPAWPRPTRLIDPPELIAAIPPDAPDLFVWRGRTH"
BASE COUNT          316 a          766 c          761 g          378 t
ORIGIN      
        1 gctggagttt ggcctcgggg tctgaactgg gttttttgga catttgcgac ggaaggagat
       61 cctggcgacg ttagaggcga ggatcggctc ccgcaacatc gcgcccgggc tggactgcac
      121 gtttctgcat cggcttcggc agagatcccg tcggcttccg catgaggtgc aaccttacgt
      181 taattgactc gttttaggag ataggaacaa aataggaaca tcaccgattg tggagctttg
      241 ggcaaggcat gacccatgcc gggcgcgatc ctgttgttgc cgaactgcgc gcgcgcctcg
      301 accggctcgc gtccagccgc aggcgttccg gggtgctgcc gttcggtgtc gcccagatcg
      361 accgccgcct cccgggcggc ggcctgtgcc tgggggcgct gcacgaggtg gcgcaggccg
      421 gcccggccca cgcttacggc gccctggcga cgctcttcat cgctggcgtt gctgcacgtc
      481 tcaagggacc ggtgctgtgg tgcctctcgt cccgcgacct gttcgcacca ggcctggcgg
      541 ccgccggcct tcatcccgat cgcgtcatct atgccgaaac cggcaaggac gccgacgtcc
      601 tgcccgtcat ggaagaggga cttcgccacc ggggtcttgc cgccgtcgtc ggcgaggtcg
      661 ccagaaccgg gctcaagtcg acgcggcgtc ttcatcttgc ggcagagaag agcggctgca
      721 cggctctgtt gctgcagcgc tggggcgagg ccgccgcgaa ccgcggcagt gccgccgtga
      781 cgcgctggcg gatcgcgccg cagccctcgc gcgaacatcc cgtgcctggc ctcgggcggg
      841 cacgctggcg gctggaactt gtgcgggtcc gcggcggtga gccggcatca tggatcgtgg
      901 aggcgtgtga tgagaagggt cgtctcgctt tttctcccga catggccgac ggaccgcatc
      961 cgcagacgca ctgacctttc ccgtgacaag ccgctcgtca cggcccgcaa gcaaggcgcc
     1021 cggcgcgtcg tggcggccgt tgatgaggcg gctcgccgtc atggcctcaa accggggatg
     1081 acggtggccg atgcgcagac attcgtcccc gaccttacag tcacggaagc cgatccgagc
     1141 ggcgacgacg ccgcgcttgc cgggctcgcc gcctgggccg tgcggcgcta cagcccgatc
     1201 gcctctcccg atgcccccga cggaatcctg atcgatagca ccggctgcga tcacctgttc
     1261 ggcggcgagc acgccatgct ggccgacatg catgcgtgcc tgagacgggc caggatctca
     1321 gttcgtggcg cggtcgcaga cacgcccggc gccgcccacg ccgtggcgcg ggtgctcgcc
     1381 gatccgatcc ggatcgttgc gcaaggaggc acggagcaag ccttgcggcc cttgccggtg
     1441 gcggcgcttc ggctgccgca ggagatcgtc gccggcctgt tcgatctcgg cttcaaagag
     1501 atcggccagg ttctcgatgc gccgcgttcg gcgctcgcgg tgcggttcgg cgccgttgtc
     1561 ggccagaagc ttgcatgggc gttgggcgcg acaccggaat tggtcgtccc ctatgtgccg
     1621 gaagacctgc cgcggcaacg gctcgtgttt gccgagccac ttgccagccc ggcgagcctg
     1681 gagcgcgccg cgcgcgacct ggcgaagcag atcgccgccg atctcgagcg gcgcgcaatg
     1741 ggcgcacgcc gtctcgacct tctgttcgag cgcgtcgaca acagcattca ggcgatccgg
     1801 gtcggccttg cgcaagcctc acgcaacccg gatcacctga tggggttgtt gcgcgggcgc
     1861 ctggagacca tcgacccggg cttcggaatc gatgccgcct cgctgatcgc cgcgcaggtc
     1921 gagcgcttgc cgtcgcagca gatcgccacc gttctgagcg acatcgcccc ggaaaccgac
     1981 atatccgagc tcgtcgaccg gctcgcgagc ctgccggccg tccggcaggt gcttcgcttc
     2041 gcgcccgtcg agagcgatct tccgcaacgc tccgtgcaac ggcttcaggc gcttgcgccc
     2101 cctggcgggc agacatggcc ggcctggccg cgcccgaccc ggctgatcga ccctccggaa
     2161 ttgatcgccg cgatcccgcc ggacgcgcca gacctgttcg tgtggcgcgg acgcacgcac
     2221 c
//
LOCUS       DATAIQ010000208         1589 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_143532, whole genome shotgun sequence.
ACCESSION   DATAIQ010000208 DATAIQ010000000
VERSION     DATAIQ010000208.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1589)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1589)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1589
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_143532"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..592)
                     /locus_tag="VHN20_03595"
     CDS             complement(<1..592)
                     /locus_tag="VHN20_03595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724887.1"
                     /translation="MHQPDRLRYYRLFDLSIASAIELPELAPLESATGADLVIARGDG
                     GAHAGYLLEIPDVARFRIDQGQRITVEQADGSDPRDVRLFLLGSAMGIALHQRGMLPL
                     HANAVVIGAAAVAFTGASGMGKSTLAAWFHDRGCRLLADDVVVIGLGESGPLAYPGLP
                     RLRLRRDALLASGRRAEDHQPSYRPDPGIEHKYDVMI"
     gene            716..>1589
                     /locus_tag="VHN20_03600"
     CDS             716..>1589
                     /locus_tag="VHN20_03600"
                     /inference="COORDINATES: protein motif:HMM:NF026257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HEX2724888.1"
                     /translation="MPDGGASPPSGSIDWGEVLRLARRHRVQSLVARGLERLGIEAPA
                     GIRQDARRIVEDNLRAADECARLADRFAAGGIDLLFVKGLSLSKLAYGDPFIKMSADI
                     DLLVEAAELVGAAALLEELGYRRQVPTRSPLATWHRLHKESLWRRPRHLVELHHRLSD
                     NPALLDGVGMGSARQQVEIFPGSKLATLARDPLVIYVAIHGASSGYFRLKWLADFAAL
                     LSGADDAEVDRLQCTANACGAGHAFAASVALAAEIFGTPAGVRTAEIAALPYNRRFQP
                     LARRALRNPAEPTDR"
BASE COUNT          241 a          554 c          547 g          247 t
ORIGIN      
        1 cgatcatcac gtcatacttg tgctcaatgc ccgggtcggg acggtaggac ggctggtggt
       61 cctcggcccg acggccgctg gcgagcaaag cgtcgcgccg aagccgcagc cgcggcagcc
      121 ccgggtaggc cagcggaccg ctctcgccga gcccgatcac gacgacatcg tcggcgagta
      181 gccggcaacc tcggtcgtgg aaccacgccg caagcgtcga tttgcccatg cccgacgcac
      241 cggtgaaggc gacggcggcg gcaccgatga cgacggcatt ggcatgaagc ggcaacattc
      301 cgcgctggtg aagtgcgata cccatcgccg agccgagcag gaacagcctg acatcgcgcg
      361 ggtcggaccc atccgcctgc tcgaccgtga tccgctgccc ctggtcgatc cggaagcgcg
      421 cgacgtcggg gatttcgagc aggtagccgg catgggcccc accgtcgccg cgggcaatga
      481 ccaggtcggc gccggtcgcg ctttccagcg gggcgagttc gggcagctcg atcgcgctgg
      541 cgatcgacag gtcgaacagc cggtaataac ggagccgatc gggctggtgc attcgtgtcc
      601 cgcgcctaga atggccggcc ctgccgccgg aggcctcttg gactatcacc gcaaaccccg
      661 actgccaaag gccttacggg tgattgccga ctgttgccgc gtttgcttcg cccgaatgcc
      721 tgacggaggc gcgtcgccgc cgtccgggag catcgactgg ggcgaggtgc tgcgcctcgc
      781 ccgacgacac cgggtccaga gcctcgtcgc ccgcggcctg gaacggctcg ggatcgaggc
      841 gccggccggt atccggcagg atgcgcgccg gatcgtcgaa gacaatctgc gcgccgcgga
      901 cgaatgcgcc cggcttgccg atcggttcgc ggccggcggg atcgacctct tgttcgtcaa
      961 gggactgtcg ctgtcgaagc tggcttatgg cgacccgttc atcaagatgt cggccgacat
     1021 cgacctgctg gtcgaagccg ccgaacttgt cggcgcggcc gcgttgctgg aggagctcgg
     1081 ctaccgcagg caggttccga cccgcagccc gctcgcgacg tggcatcggc tccacaagga
     1141 gtcgctgtgg cggcgccctc gccacctcgt cgagcttcat caccggctgt ccgacaaccc
     1201 ggcgctgctc gacggagtgg gcatgggctc ggcgcggcag caggtcgaga tttttcctgg
     1261 ctcgaagctc gccacgctcg cccgcgaccc gctcgtcatc tacgtcgcca tccacggcgc
     1321 ctcgagcggc tactttcggc tgaagtggct ggcagacttc gcggccctgc tgtcgggagc
     1381 ggacgacgcc gaggtcgatc ggctgcaatg caccgcgaat gcttgcggcg ccggccacgc
     1441 ctttgccgct tcggtggcgc tggcggccga aatctttggg acaccggcgg gggtgcgaac
     1501 cgccgagatc gccgccttgc cctataaccg gcgcttccag ccgctcgccc ggcgggcgct
     1561 gcgcaacccg gccgagccaa ccgaccggt
//
LOCUS       DATAIQ010000209         3478 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_102839, whole genome shotgun sequence.
ACCESSION   DATAIQ010000209 DATAIQ010000000
VERSION     DATAIQ010000209.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3478)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3478)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3478
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_102839"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(261..641)
                     /locus_tag="VHN20_03605"
     CDS             complement(261..641)
                     /locus_tag="VHN20_03605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724889.1"
                     /translation="MDNEPSTKMRMDPSYIAALDLVAVHPGGVRVPVSLRVGAPKRVS
                     RGEWSCAVRLDGLHDGLTTTRGEDSVQALCLALGLAATLLRDFVSRGGRLVHAEATED
                     GGSESDWPLEAYFRGLAMPESPAT"
     gene            complement(864..1436)
                     /locus_tag="VHN20_03610"
     CDS             complement(864..1436)
                     /locus_tag="VHN20_03610"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEX2724890.1"
                     /translation="MTAATRPNGTRERLLETASRLFYERGFLGVGVDEIVAESGVAKM
                     TLYRHFPSKDDLVVAYLKRSEDEFCEWFERALATEREPRAKLLAVFTALGALAQSRQC
                     LGCTFQVSVSEYPDPNHPAHRVAVGHKKETRRQFATLARQARLRDPNALADKLLLLMD
                     GAWVAARIFGRDNPARHVADAARSLLAAHE"
     gene            1512..2186
                     /locus_tag="VHN20_03615"
     CDS             1512..2186
                     /locus_tag="VHN20_03615"
                     /inference="COORDINATES: protein motif:HMM:NF015747.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HEX2724891.1"
                     /translation="MRVGILGSGMVGQTIGARLAERGEAVVLGTRSPTNVADKRGMGA
                     PLSEWLAKVGRNGRLGTFAEAAQHGEVVINATSGTGSLEALKLAGAASLEGKILIDVA
                     NPLDFSKGMPPSLTVCNTDSLGEQIQKAFPAAKVVKTLNTTNALIMVDPAQVAGGDHD
                     IFVSGNDAGAKARVADLLQRWFGWTSVIDLGDITTARGTEMLLPVWVRLYAALGTPMF
                     NFKIAR"
     gene            2192..2374
                     /locus_tag="VHN20_03620"
                     /pseudo
     CDS             2192..2374
                     /locus_tag="VHN20_03620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020050995.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
     gene            complement(2749..2979)
                     /locus_tag="VHN20_03625"
     CDS             complement(2749..2979)
                     /locus_tag="VHN20_03625"
                     /inference="COORDINATES: protein motif:HMM:NF025742.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnA antitoxin family protein"
                     /protein_id="HEX2724892.1"
                     /translation="MRKEYDFSNARPSPYAKRLKRSVTIRLDEPTIQYFQRLAAELEV
                     PYQTLINLYLRDCAETGRRPGLRWRPPKKGAA"
BASE COUNT          621 a         1140 c         1140 g          577 t
ORIGIN      
        1 cagcacaaag acgacgattc tgagattcat gagttgcctc cacggatcgc gtgatcactg
       61 ggaagagagc gcggactcct tccacggacc atctgacctt ttgacgacca cgccgggcag
      121 atgttaaggc ggaccgtcgt ggcggccgaa accctctggt cggtcggcct aacgcgcgcg
      181 acgctcgggt gcaggcgcgc cgtcacgatg gcgagtgaag tgagcgtttc gtaaaggcga
      241 cggtcagctg cagcggcacg tcaggtggca ggcgactcgg gcatcgcgag ccctctgaag
      301 tacgcctcga ggggccagtc ggactcggat ccgccgtcct cagtcgcctc cgcatggacc
      361 aggcgcccgc ctcgactgac gaagtcccgc agcagcgttg ccgccagccc cagcgccaga
      421 cagagcgcct ggacgctatc ctcaccgcgc gtcgtcgtca ggccgtcgtg aaggccatcc
      481 agccggaccg cgcacgacca ctcgccacgc gatacacgct tgggcgcgcc gactcgtagt
      541 gagacgggta cccgtacgcc gcctgggtgc accgcgacca ggtcaagggc ggcgatgtac
      601 gaggggtcca ttcgcatttt ggtcgacggc tcgttgtcca cctgacgcac cggagtccag
      661 ctgcggcgtg cagctggaca ggcgcgaccg aggataacta acgacactct cgccacgcgc
      721 tcaacccaac gacttcctct ggaagccgcg ccgtcaggct acaacttctc gttgggccgc
      781 gctcactaag ccgtgcaatc acggcgcggt gaaattcgag cggatagatg ccgcgcgtct
      841 tcagggctga gtcagcgcag cctttactcg tgcgctgcca ggagtgacct ggcggcgtcg
      901 gcgacgtgcc gcgcgggatt gtcgcggccg aagatgcgag ccgccaccca cgcgccatcc
      961 atgagtagca gtagcttgtc cgccagcgca ttcggatcgc gcagcctcgc ctgacgcgcc
     1021 agcgtcgcga actgccgacg cgtttccttc ttatgcccaa cggcgaccct gtgcgcgggg
     1081 tggttcgggt cggggtattc cgatacggac acctggaacg tgcatccgag gcactgacgc
     1141 gactgcgcca acgctccgag tgcggtgaag accgccagca gcttcgcgcg cggctcgcgc
     1201 tccgtggcca gcgcccgctc gaaccactcg cagaactcgt cctcggagcg tttcaggtac
     1261 gccacgacga ggtcatcctt ggaggggaag tgccggtaca acgtcatctt cgcaaccccg
     1321 gattcggcga cgatctcgtc cacgccgacg ccaagaaagc cgcgctcgta gaagagccgg
     1381 ctcgctgtct ccagcagccg ttcccgggtg ccattgggtc gcgtggccgc agtcatgctt
     1441 gacaatgata ccgatctgtc tactttctgg caacgacgat acagatcggt atcatcttca
     1501 ggagcggggt catgagagtc ggcattctgg gttcgggcat ggtggggcag acgatcggcg
     1561 ccaggctggc cgagcggggt gaggccgtcg tgctcggcac gcgatcgccc acaaacgtcg
     1621 cggacaagcg cgggatggga gccccgctgt ccgagtggct cgccaaggtc ggccgcaacg
     1681 gtcgactggg caccttcgcc gaggccgcgc agcatggcga ggtcgtcatc aatgcgacct
     1741 cgggaacggg ctcgctcgaa gcgctgaagc tcgccggcgc cgccagcctc gaagggaaga
     1801 ttctcatcga cgtcgccaat ccgctggact tctcgaaggg catgccgccc tcgctgaccg
     1861 tctgcaatac cgactccctc ggcgagcaga tccagaaagc ctttccggcg gcgaaggtgg
     1921 tgaagacgct caatacgacc aacgctctga tcatggtgga cccggcgcag gtggccggcg
     1981 gcgatcacga cattttcgtc agcggcaacg acgccggcgc aaaggcccgg gtcgccgatc
     2041 tcctgcagcg ctggttcggc tggacatcgg tcatcgatct cggcgacatc acgacggcgc
     2101 gcggcacgga gatgctgctt ccggtctggg tacgactgta cgcagcgctc ggcacgccga
     2161 tgttcaactt caagatcgcg cgctgaccac gatggaaatg cgccggctgg gaaggaacgg
     2221 gcccgaagtc tcggcgatcg gcctgggctg catggggatg tcggacctgt acggtccggc
     2281 ggacgacgcc gagagtatcg ccaccatccg ggctgcgctg gacgccggga tcacgttgct
     2341 cgacaccggc gattactacg gcatgggaca cgacttcctt ccgttctctc gatgccgcgc
     2401 ggaagtggct ccattcaccg gcaccaggac ttcgaggaag aaccccgcta tttgctctca
     2461 ctgagggcga aatcgacagc gtgctcaagc tgctcgggac gctcgctgcg ggaggatttc
     2521 gctgagattt cgcggcgaag tctggcgcca tataccgcgc ggagcgcacc cgctgcacct
     2581 agggtacgtt ctgcgagcga gtgggagatg gaaccggtac ggagagtatg gttgcctcta
     2641 tactgctatc tcgcgggctg gcgcgctcaa cgctcagctg caggcgcatc ttcataatgc
     2701 gagcgcagcg agcacaccgc aaaggcgact gtcagctgca gcggcacgtt aggccgcgcc
     2761 cttcttgggc ggacgccacc gcagcccggg ccgacgccca gtctcggcac agtcgcgcag
     2821 gtaaaggttg atgagcgtct ggtacgggac ctcgagctcc gccgccagcc gctgaaagta
     2881 ctggattgtg ggctcatcca gccggatggt cacggaccgc ttgaggcgct tcgcgtacgg
     2941 actgggccgg gcgttgctga aatcgtattc cttcctcatc ctctccaccg cgcgtcatac
     3001 tggacgcgct cagaccgggt ggccttgcgg gccgagatga gccgaacgag tgagcccgcc
     3061 tcccgcacgc agtgcacaac gaccaggacc cgcaaggcgc tgctcatccc aagcaggatg
     3121 aagcgctcct cgtccgccgt cgagtgatcg ggatcgtcct ggatgagcgc gtagtcatcc
     3181 aggaacgccg tttcggcctc ggcgaagctg acgccatgct tgcggagatt ggcagccgcc
     3241 ttggccggat ttcattcgaa gcggaccggg tccatggcgg aatgtacgta cgtcgtacat
     3301 acggcgcaag cccggcgtgc ggcggcctaa cgcgcccaac gctcagctgc gggcgcgtct
     3361 aatagagcgc gcggcgcagc cgcgcgccat tccgcagagg cgaccgtcgg acgcagcggc
     3421 acgttaggcc gcgggtcggg acgcaaagcg gcgacgcccc tcattgccag ctcagccc
//
LOCUS       DATAIQ010000210         3583 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_235682, whole genome shotgun sequence.
ACCESSION   DATAIQ010000210 DATAIQ010000000
VERSION     DATAIQ010000210.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3583)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3583)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3583
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_235682"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..311)
                     /locus_tag="VHN20_03630"
     CDS             complement(<1..311)
                     /locus_tag="VHN20_03630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007565975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CpaF family protein"
                     /protein_id="HEX2724893.1"
                     /translation="MFGKRSGSAPAPAPAPARHAATPAEGVGLAVPVLSDTDGLRPGM
                     PERAPEPRPVITVQETHRSEEYYQTKSMIFGALIEAIDLAQLSRLDAEAAREEIRDIV
                     S"
     gene            complement(339..1583)
                     /locus_tag="VHN20_03635"
     CDS             complement(339..1583)
                     /locus_tag="VHN20_03635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003598119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX2724894.1"
                     /translation="MSDMNDSQDRVIAPVPRVTIQAFCETSDVAHVIEAAAADRRMQK
                     AHIKVQMGGPAAALEAYRHAPTPNVIVLESHGNRTNIVDYLDTLAEVCDAGTKVIVIG
                     HVNDVVLYRDLVRRGVSEYLIGPVAILDFVRAVSELFTTPGAEPVGRVIAVVGAKGGV
                     GASMLAHNLAWTIAGQAMTSTVIVDLDVAFGTAALDFNQDPPQGIAEAVFAPDRLDAN
                     LVDRLLSKCSDHLTLLAAPAMLDRTIDLTETAVDGLLDILRGTIPTIVLDVPHLWTAW
                     ARRMLVSADEVVIVAAPELASLRNAKNLFEILRQSRPNDRLPKIVLNQTGIPKRPEIA
                     ASEFAKAVGTDLAAVVPFDAQLFGTAANNGQMIAEVQPSGKVAETFATLAGSLTGRSE
                     MKRSRSSLLDPLLAKLVRRKAS"
     gene            complement(1608..2333)
                     /locus_tag="VHN20_03640"
     CDS             complement(1608..2333)
                     /locus_tag="VHN20_03640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018042744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CpaD family pilus assembly protein"
                     /protein_id="HEX2724895.1"
                     /translation="MPIARSGSTAGRVVTIAALATALAACTADRVATGSTRPHDYRER
                     HPIVLAEGARTLDVFVHNPGGLDARQQDDLRAFVAEYRRYGHAAIMAQVPVGTRDDTA
                     ARATMAHIADLVRAAGVPAAYLATATYPVAEPVIAAPIRLTFTRLTAKVASQCGTWPE
                     DMGVSDFRHHTSNQSYWNLGCAMQSNVAAQIADPIDLVRGRAEGRPDSIRRGKVIDAI
                     REGKDPSTQYRQEGTKINSAVGN"
     gene            complement(2356..>3583)
                     /locus_tag="VHN20_03645"
     CDS             complement(2356..>3583)
                     /locus_tag="VHN20_03645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015929453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="type II and III secretion system protein family
                     protein"
                     /protein_id="HEX2724896.1"
                     /translation="VVRSTRKIFVIGMENGATSIFVVDAEGRQIAAFEVTVGRDLAAL
                     RNTLRVALPASQVEVRPAGDSILLTGMVSSAAEAQQAVDIANAFVGVSGGLFGATKGA
                     VVNSLTIKGRDQVMLRVTVAEVSRNVLKQLGVDISGSWSAFDFSSVNPFPLQRQILSN
                     TLLPGDANVATGISSGNFNAQSTLRAFERAGVSRIIAEPTLTAISGETAKFTAGGEVP
                     IPKSQDCATDAVGRRTCTIGVEHKPFGVTLTFTPLVLSENRISMRVNTEVTELDFENT
                     IRFDVVNIPAFRVRKSDTTVELPSGAVMMTAGLIQQASSQVINGLPGLMNLPVLGSLF
                     RSRDYQRKETELMILVSPFVAKPMTAAQVKRPDDGFVEPDDAQTVLLGRLNKLYGVAG
                     AVPSKSYKGNFGFITD"
BASE COUNT          613 a         1150 c         1181 g          639 t
ORIGIN      
        1 tcgctgacga tgtcccggat ctcttcccgc gccgcctcgg catcgagtcg ggacagctgc
       61 gccagatcga tggcttcgat cagcgcgccg aagatcatgc tcttcgtctg gtagtattct
      121 tccgacctgt gcgtctcctg aacagtaatc accgggcgcg gctcgggcgc gcgttccggc
      181 ataccgggac gcagcccgtc cgtatcgctc agtaccggga ccgcgagtcc gacaccctcc
      241 gccggcgtgg ccgcatgccg cgccggtgcg ggcgcgggcg cgggtgccga tcctgatctc
      301 ttgccaaaca tccaagcccc ttacgtgatg gatgcgcgtc aggacgcctt gcggcgcacg
      361 agcttcgcca gaagcggatc gagaaggctg gaacgcgaac gcttcatctc ggagcggccg
      421 gtcaatgacc cggcgagagt agcgaaggtc tctgcgacct tcccggacgg ctgcacttcg
      481 gcgatcatct ggccgttgtt cgccgcagtt ccaaaaagct gcgcgtcaaa aggcacaacg
      541 gcggccagat cggttccgac tgccttggcg aactccgagg cggcgatctc ggggcgtttc
      601 gggatgccag tctggttcag gacgatcttc ggcaggcgat cattcggccg gctctggcga
      661 aggatttcga aaaggttctt ggcgttgcgc agggatgcga gctcgggcgc cgccacgatg
      721 acgacctcgt cggcgctcac cagcatgcgc ctggcccagg ccgtccatag gtgcggcacg
      781 tccagaacga tggtcgggat cgtgccgcgc agaatgtcga gcaacccgtc gacggcggtc
      841 tcggtcaaat cgatcgtgcg atcgagcatc gccggagcgg ccagcagggt cagatggtcg
      901 ctgcatttcg agagcaggcg gtccacgaga ttggcgtcga gacggtcggg ggcgaaaacc
      961 gcctcggcga tgccttgcgg cggatcctgg ttgaagtcga gcgcagcggt cccgaacgcg
     1021 acgtcgagat cgacgatcac tgtcgatgtc atcgcctggc cagcgatcgt ccatgcgagg
     1081 ttatgcgcca gcatcgaggc gccgaccccg cccttggcgc cgacgaccgc gatgacccgg
     1141 cccacgggct cggcaccggg ggtcgtgaac agctcggaca cggcgcgcac gaaatccagg
     1201 atcgcgaccg gcccgatcag gtattcgctg acgccacggc gcacaagatc gcgatagagg
     1261 acgacatcgt tgacgtgccc gatcacgatc accttggtgc cggcgtcgca aacttcggcg
     1321 agggtgtcga gatagtcgac gatgtttgtg cggttgccat gggattcgag cacgatcacg
     1381 ttcggcgtcg gcgcgtgccg gtaagcctcg agcgccgccg ccggcccccc catctggacc
     1441 ttgatgtgcg ccttctgcat gcgccgatcg gccgccgcgg cctcgatcac gtgcgcgacg
     1501 tccgaggtct cgcagaacgc ctggatggtg acgcgcggaa ccggcgcgat cacgcgatct
     1561 tggctgtcgt tcatgtcaga catcgatgca agccttcgat atggccatca gtttccgacc
     1621 gccgagttga tcttggtgcc ttcctggcgg tactgcgtcg acggatcctt gccttcgcgg
     1681 atcgcgtcga tgactttgcc gcgacggatc gaatcgggtc gaccttcggc gcggccgcgg
     1741 acgagatcga tcggatcggc gatctgcgcg gccacgttcg actgcatggc gcagcccaga
     1801 ttccaatatg actgattgct ggtgtgatgc cggaaatcgc tgacccccat gtcctcgggc
     1861 catgtgccac actgactggc gaccttcgcg gtgagccgcg tgaaggtgag ccggatcggc
     1921 gctgcgatca ccggctcggc gaccgggtag gtagccgtgg ctagataggc agcgggcacc
     1981 cccgcagcgc gcacaagatc ggcgatatgc gccatggtgg cgcgcgcggc ggtgtcgtcg
     2041 cgggtgccga ccgggacctg cgccatgatg gcggcatgac cataacggcg atattcggcc
     2101 acgaaggcgc gaaggtcgtc ctgctggcgc gcgtcgagcc cgccggggtt gtgcacgaaa
     2161 acgtcgagcg tgcgcgcacc ttcggcgagc acgatgggat ggcgctcgcg gtaatcgtgg
     2221 gggcgcgtcg acccggtcgc gacccggtcg gcggtacagg cggcaagcgc cgtcgccagc
     2281 gcggcaatcg tcacgacgcg gcccgcggtc gagccggatc ttgctatggg caacatggtg
     2341 atccctgtca tcgacctagt ccgtgatgaa tccgaagttg cccttgtaac tcttcgaggg
     2401 cacggccccg gcgacgccgt agagtttgtt gagccgtccg agcaggaccg tctgcgcgtc
     2461 atcgggctcg acaaagccgt cgtccggccg cttgacctgc gcggctgtca ttggcttggc
     2521 cacaaagggg ctgaccagga tcatcagctc cgtttccttg cgctggtagt cgcgcgagcg
     2581 gaacaggctg ccgaggactg gcaagttcat cagcccgggc aggccattga tgacctggct
     2641 cgaagcctgc tggatcaggc cggccgtcat catcacggcg ccggacggca gctcgaccgt
     2701 cgtatctgac ttccgcacgc ggaaggcagg gatgttcacg acatcgaagc ggatcgtgtt
     2761 ctcgaaatcg agctcggtca cctcggtatt cacgcgcatg ctgatgcggt tttccgacag
     2821 gacgaggggc gtgaacgtca atgtcacccc gaacggcttg tgctcaaccc cgatcgtgca
     2881 cgtgcgccgg ccgaccgcat cggtcgcgca atcctgactt ttcggaatcg gcacctcgcc
     2941 ccccgccgtg aatttcgccg tttcgcccga gatcgccgtc aaggtcggct ctgcgatgat
     3001 gcgcgacaca ccggctcttt cgaaggcgcg aagcgttgac tgcgcattga aattgccgct
     3061 gctgataccc gtggcgacgt tcgcatcgcc gggcagaagc gtgttcgaca ggatctgacg
     3121 ctgcagcggg aacgggttga ccgacgagaa gtcaaaggcc gaccagctgc cgctgatgtc
     3181 gacgcccagc tgcttgagga cgttgcgcga cacctccgcg accgtgacgc gcagcatcac
     3241 ctggtccctg cccttgatcg tcaacgagtt gacgaccgct cctttggtag ccccgaacag
     3301 cccgcccgag acgccgacga atgcattggc aatatcgacg gcctgctgcg cttcggccgc
     3361 agaggatacc attccagtca ggaggatcga atctccggca ggcctgacct cgacctgcga
     3421 ggcgggcagg gccacgcgca gcgtgttcct caaggcggcg agatcgcgtc cgaccgtgac
     3481 ttcgaatgcc gcaatctggc gaccctccgc gtctacgacg aagattgacg tggccccgtt
     3541 ctccatgccg atcacgaaga tctttcgcgt cgagcggacg acc
//
LOCUS       DATAIQ010000211         3339 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_50947, whole genome shotgun sequence.
ACCESSION   DATAIQ010000211 DATAIQ010000000
VERSION     DATAIQ010000211.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3339)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3339)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3339
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_50947"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..355
                     /locus_tag="VHN20_03650"
     CDS             <1..355
                     /locus_tag="VHN20_03650"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF025054.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX2724897.1"
                     /translation="WSRRQPNYANVTGPAGQAVTATPKIRSVFVHPTWGRRGLARHLV
                     ELAETDMRMAGYTATELTATIAGVPLYETLGFKVARHLAVTLPGGIPLPLVHMVKTLT
                     AASRKGFTPPAAVLD"
     gene            511..2442
                     /locus_tag="VHN20_03655"
     CDS             511..2442
                     /locus_tag="VHN20_03655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015929877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724898.1"
                     /translation="MSLLNQARRQQLRAILSASTASLALLVAAGLPAAACPLGNHDSP
                     RVRLLHAKTPAMSPAMSPAMNPAMSPAGHHGSHAGHRTQVAQAQPQTRMPARNELGAY
                     ARDLPRGAAAPRIEDKPPLFDNLGTLSWAVADTRNPQAKAYFDQGYRLAWGFNHAEAA
                     RSFRAAQALDPQCAMCLWGEAWVLGPHINYPVEADATARAVAVLEQARRLSSRRDDMQ
                     AALINALAKRYSPDTKADRKALDEAYADAMQAVQARFPHDADVALLTADALMNLSPWD
                     YWADGGRTPKGATERMVALIEGVLGERRVGPLLANPNHPGAIHLYIHAVEASDRPERA
                     APHAARLAALMPGAGHLVHMPSHIWYRLGRWRDSLDANLQAAAADENLMKRGGASLLY
                     SQGYFAHNVHFIMASALMGGDGDTAVRAAQKLATVVSDRAMREVPWTQPIAAAPYNAH
                     ARFSSPQTVLALPAPEGDFPFVRATWHYARGVALARLGKAEAARAEAAAIRDLARAPQ
                     IAALGEAGVPAADVLGIAERVIEGRIAQGAGDHAGAAARFSEAAATQDKLPYMEPPFW
                     YYPVHQSLGAALLQQGKASEAEAAFRAALQRAPNNGWAAAGLLRTAQTRGDAKALDAA
                     KTLMQRNWFGEDVPELDRL"
     gene            2807..>3339
                     /locus_tag="VHN20_03660"
     CDS             2807..>3339
                     /locus_tag="VHN20_03660"
                     /inference="COORDINATES: protein motif:HMM:NF017760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX2724899.1"
                     /translation="MDKPVAATRAPRLAALRERNFVLYLFGQFTSQLGSWIELTAVSW
                     IVYEMTNSPTLLGLVGLFRATPTIVLALFGGAIADRVTRRTLLLCTETTMLVTSLVVG
                     LLAATGRLEYWHLYVLNVVSGTLQAFSVPARHALMANLVPRSAVRSAVTLNSIAVRSG
                     GFIGPSIAGLTLAYGGYA"
BASE COUNT          514 a         1228 c         1105 g          492 t
ORIGIN      
        1 ctggagccgc cggcagccga actacgccaa cgtgaccggc cccgccggcc aggctgtcac
       61 ggcgactccc aagatccgca gcgtgttcgt gcatccgacc tggggccgcc ggggcctcgc
      121 acgacacctg gtcgaactgg ccgagaccga catgcgcatg gccggctata cggccaccga
      181 gctgacggcg accatcgcgg gcgttccgct ttacgagacc ctgggcttca aggtggccag
      241 gcacctcgcc gtcaccctgc ccggcggcat cccgctgccc ctcgtgcata tggtcaagac
      301 gctgacggcg gcatcccgaa aaggcttcac gccgccggcc gcggttctcg attgagcgca
      361 cgatttcggc acatctccag aagggctcaa ggtttcctcc aagctttggg gctgtcgggg
      421 cgacaaggtg agtgcggccg ttcggcggcc gcccggcgtc ggcagtgacg tgcccgggcc
      481 ttcccgacac cccattccgg agcccacgtt atgagcctcc tcaatcaggc ccgccggcag
      541 cagctgcgcg ccattctctc ggcttccacc gcgtcccttg ccctgctggt tgcggccggg
      601 ctgccggctg ccgcctgccc ccttggaaat cacgacagtc ctcgtgtgcg cctgctccat
      661 gccaagaccc cggccatgag cccggccatg agcccggcca tgaacccggc aatgagcccg
      721 gccggtcacc atggttccca cgccggccac cgcacacaag tcgcgcaagc ccagccgcaa
      781 accaggatgc cggcgcgcaa cgagctcggc gcctacgccc gcgaccttcc gcgtggcgcc
      841 gccgcgccaa gaatcgagga caagccgccg ctgttcgaca atctcggcac cctgtcctgg
      901 gcggttgcag acacgaggaa cccgcaagcg aaagcctatt tcgaccaggg ctaccggctc
      961 gcctggggct tcaaccacgc cgaggcggcg cgctccttcc gggcggcgca ggcgctcgac
     1021 ccgcaatgcg ccatgtgcct gtggggcgaa gcctgggtgc tcgggccgca catcaactac
     1081 cctgtcgagg ccgacgccac cgcgcgcgcc gtcgcggtgc tcgagcaggc gcgtcgcctc
     1141 tcgtcgcgtc gcgacgacat gcaggcggcc ctgatcaatg cattggccaa acgctattca
     1201 cccgacacca aggccgacag gaaggcgctc gacgaggctt acgccgacgc catgcaagcc
     1261 gtgcaggcgc gcttccccca cgacgccgac gtggcgctgc tcaccgccga cgcgctgatg
     1321 aatctcagcc cgtgggacta ctgggccgac ggggggcgca cgccgaaagg cgccacggag
     1381 cgcatggtcg cgctgatcga gggtgtgctc ggagagcggc gggtcggacc gctgctcgcg
     1441 aatccgaatc atccgggcgc catccatctc tacatccacg ccgtcgaggc gtcggaccgg
     1501 cccgagcgcg cggctccgca cgcggcgcgc ctcgccgcgc ttatgccggg cgccgggcac
     1561 ctcgtgcaca tgccgagcca catctggtac cggcttggcc gctggcgcga cagccttgac
     1621 gccaatctgc aggccgccgc cgcggacgag aacctgatga agcggggagg ggccagcctg
     1681 ctctattcac aaggttactt cgcccacaat gtgcatttca tcatggcctc ggcgctgatg
     1741 ggcggggacg gcgacacggc cgtcagggcg gcgcagaagc tggccaccgt cgtgtcggac
     1801 cgcgcgatgc gcgaggtgcc atggacgcag ccgatcgcgg cggcgccgta caacgcgcat
     1861 gcgcgcttct cgtcgccgca gacggttctg gcgctgcccg cgcccgaggg cgatttcccg
     1921 ttcgtgcgcg cgacctggca ctatgcgcgc ggcgtggcgc tggcgcgcct cggcaaggcc
     1981 gaagcggcgc gcgccgaggc ggccgccatc cgtgatctcg cgcgcgcacc gcagatcgcc
     2041 gcgctcggcg aagccggcgt gcccgccgcc gacgtgctgg gcatcgccga gcgggtcatc
     2101 gaggggcgca tcgcgcaggg cgcaggcgat catgccggcg cggccgcgcg cttctccgaa
     2161 gccgcggcga cccaggataa gctgccctat atggagccgc cgttctggta ttaccccgtg
     2221 catcagtcgc tcggcgcggc gctgctgcag cagggcaagg ccagcgaagc ggaggcggcg
     2281 ttccgggcgg cgctgcagcg cgcgcccaac aacggctggg ccgccgccgg cctgctgcgc
     2341 accgcgcaga cgcgcggcga tgccaaggca ctcgatgcag caaagacgct gatgcagcgc
     2401 aactggttcg gtgaggacgt gccggaactc gaccgtctct gatctgcacg cgcggatccg
     2461 aatcggatca gcatcgacgc gcgcacagcg cgacggcact cacgttgcgt tggcggcgag
     2521 ggcgacaaca tccggagcgc cggcgtctcg tccacgtccg tcttgtgacg cacggggctc
     2581 tcccgcgacg acggccgcgg ttgcccgacc gcggcccggc attcgtgtgc gaacgcggtt
     2641 gtacacgctc gcggccgcgc ggcacggcga gtttgtcagc acagtctgac gcggctatcg
     2701 tggccgctcc gcccgcaaga catggaacga cccttgccgc ccgagcctgc tccccaaacg
     2761 tcgacatgta agcacacggg agcagatcag gctcgggaca tgctcaatgg ataaaccggt
     2821 cgcagcaacc cgggccccac ggctcgccgc gctgcgcgag cgcaacttcg tcctttatct
     2881 gttcggccag ttcacgtcgc agctcggaag ctggatcgag ctgacggcgg tcagctggat
     2941 cgtctacgaa atgaccaact cgccgacgct gctcgggctc gtcgggctgt ttcgcgccac
     3001 gccgaccatc gtcctggcgc tgttcggcgg cgccatcgcc gacagggtca cgcgccgcac
     3061 gctcctcttg tgcaccgaaa cgacgatgct ggtcacctcg ctggtcgtcg ggctgctcgc
     3121 cgcaacgggc cggctggaat actggcacct ctatgtcctg aatgtcgtga gcgggacctt
     3181 gcaggcgttc tccgtgcccg cccgccacgc gctcatggcc aacctggtgc cgcgatccgc
     3241 cgtgcgcagc gccgtcaccc tgaactcgat cgcggtgcgc agcggcggct tcatcggccc
     3301 atcgatcgcc ggcctcaccc tcgcatatgg cggctatgc
//
LOCUS       DATAIQ010000212         4297 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_50953, whole genome shotgun sequence.
ACCESSION   DATAIQ010000212 DATAIQ010000000
VERSION     DATAIQ010000212.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4297)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4297)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4297
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_50953"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            63..2222
                     /locus_tag="VHN20_03665"
     CDS             63..2222
                     /locus_tag="VHN20_03665"
                     /inference="COORDINATES: protein motif:HMM:NF024938.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase family protein"
                     /protein_id="HEX2724900.1"
                     /translation="MDLEASRKKVEALTAPGNVVLVGASDRPGGWAARVWRNLNHYKF
                     PGNLHLINPRRDEIWERPCYPDFASMPEPPDHMVVLVPAAQVPEVLRAGAAAGARSAT
                     IFSSGFGEAYDEEGLELGRQLRQAIRDTGLGVSGPNCMGNICARSGLVTLTEDRPLKL
                     SPGPVALVGQSGGVMIFVNQALEERGIAAEYLITSGNEAGLTVADYIAFFASEPEIKV
                     ILVYIEALKDAKSFASACRVARQAGKSVVAMKLGQSQAGRAAAMAHTASLAGSMEAFD
                     ALAADIGVIRAETLDDAVEITELLAHTGAPKGTRLGAVTLSGAYRGLLLDAAERNGLT
                     FPTLAPETKARMDAVLAVGSLVSNPVDGGFGVLTSEDTYRACLDALQADPNVDMVLLQ
                     ESVPRQPGSARAERYIRLVGDYAAAAAKPTAFVTLTSHGHTDYSRALRAEAPRVSFLQ
                     EANKALRAIGAAARASQLEALAPDGPAIRAPSEGERLACERVRASARSGAASLNEAES
                     KALLRAYGFALPAEELTVSADAAVSAARRIGYPVVMKGVSPTLLHKSDAGAVMLGVAG
                     DDAVRAAWASIFANVQAYGHPDPLEGVLVAEQVSGGIELALGVHRDPEIGLVVMAGAG
                     GVLLELIKDASFAVPPITPDKARNLLAQTRVAKLMAGYRGARPSDTDAVVQALLALGR
                     IADDLRDVVESIDINPFVALEQGGRVLDALVVLRNVG"
     gene            2589..>4297
                     /locus_tag="VHN20_03670"
     CDS             2589..>4297
                     /locus_tag="VHN20_03670"
                     /inference="COORDINATES: protein motif:HMM:NF024994.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase family protein"
                     /protein_id="HEX2724901.1"
                     /translation="MNEGFAGSAFRSPESVLRASSVAIVGASERGKWPKQIYANLREH
                     GYPGPVYLINPRQQEVFGERAYPSLRELPGKVDHAIVIVPAAAVPKVLEDAEQAGLAS
                     ATVYAAGLGDGDDPGSKERGVWLREFSSKSRMRIAGPNCMGAHSYRERFLAYPNGDLA
                     RLPPGPLACIFQSGGTLQFWMKSAADRGIRFSYGISSGNESDLDLADYLNFVVDDPET
                     RHIVLFIEGIRRPEAFMQAAARALAAGKPIIAIKTGATMRSRMAAQSHTGAIAGDYAA
                     YVAMCERYGIVNCRNLEDLLETALAFQCNRLPRGPRIGFVTTSGGTVDLLYDYAEAEG
                     AVMPAFAESTLEALRPHMQEGITPKNPLDLGIPSTLAAAADVCEIVLRDPNVDMLAWA
                     GQLPRKKEAWPDVTPLQRLPTVTDKPILAFGRMVYQVTPGSIELQDAVGFPFLQGLEP
                     TLRALNALSFYAERQGRAPAALPPAKPGRLSPETLDATLAQYGIALPQSRSVGPVADA
                     VAAAEAIGFPVALKIRSPDILHKTEAGGVVLGLTTGVMVQQAAERLLASAGAAYPGAR
                     IDG"
BASE COUNT          662 a         1474 c         1471 g          690 t
ORIGIN      
        1 gctggcaatc ctggggcctg tggtcgtaaa ggctgacggc acgccgcaca tgaggaggga
       61 ccgtggatct cgaagcgtcg cgcaagaaag tggaggcgct gaccgcgccg ggaaacgtcg
      121 tcctcgtcgg cgcgagcgat cggcccgggg gctgggcggc gcgggtctgg cgcaacctca
      181 atcactacaa gttcccaggc aacctccacc tcatcaaccc tcgccgcgac gaaatctggg
      241 agcggccctg ctatccggat tttgcgtcga tgcccgagcc gcccgaccac atggtcgtgc
      301 tcgtccccgc cgcgcaggtg ccggaggtgc tgcgcgccgg cgcggccgcg ggcgcacgca
      361 gcgcaacaat tttctcctcc ggcttcggcg aggcctatga cgaggaaggt ctggagctgg
      421 ggcgccagtt gcggcaggcc attcgggaca ccggcctcgg cgtgtccggg cccaactgca
      481 tgggcaacat ctgcgccagg tccggtctgg tgacgctgac ggaagaccgg ccgctaaaac
      541 tctcgccggg accggtggcc ctcgtcggcc agagcggcgg cgtgatgatc ttcgtcaacc
      601 aggcgctcga ggaacgcggc atcgccgccg aatacctcat caccagcggc aatgaagccg
      661 gcctgacggt cgcggactac atcgccttct tcgcctccga gccggagatc aaggtgatcc
      721 tcgtctatat cgaggcgctc aaggacgcca agtcgtttgc gtccgcgtgc cgtgtggcgc
      781 gccaggccgg caagtcggtc gtcgccatga agctcggcca gtcgcaagcc gggcgtgccg
      841 cggcgatggc gcataccgcc tcgctcgccg gctccatgga ggcgttcgat gcgctcgcgg
      901 ccgacatcgg cgtgatacgc gccgagaccc tcgacgatgc cgtcgagatc acggaattgc
      961 tggcccatac cggcgcgccg aaaggaacgc gattgggagc ggtgacgctt tcgggggcgt
     1021 accgcggctt gctgctggat gcggccgagc gcaacggcct caccttcccg acgctcgcgc
     1081 cggagacgaa agcgcggatg gacgcggtcc tggcggtcgg gtcgctggtg agcaacccgg
     1141 tcgacggcgg cttcggcgtg ctgacgagcg aggacaccta ccgggcctgc cttgacgcgc
     1201 tgcaggccga tccgaacgtc gacatggttc ttctgcagga gagcgttccg cgacagccgg
     1261 gctccgcccg ggcggagcgc tatatccgtc tcgtcggcga ctatgcggcc gctgccgcga
     1321 agccgaccgc cttcgtcacg ctgacctcgc acgggcatac ggactacagc cgggccctgc
     1381 gggctgaagc cccgcgagtc tcgttcctgc aggaggcgaa caaggcgcta cgcgccatcg
     1441 gcgcggcggc acgcgcttcg cagctcgagg cgttggcgcc ggacggtcca gcgatccgcg
     1501 cgccgagcga aggtgagcgg ctcgcctgcg agcgcgtacg cgcgtcggcg cgatcgggtg
     1561 ccgcgtccct gaacgaggcg gagtcgaaag ccttgctccg cgcctatgga ttcgccttgc
     1621 cggccgagga gctaaccgtt tccgcggacg cggcggtctc ggctgcgcgg cgcatcggct
     1681 atccggtggt gatgaagggc gtctcgccga cgctgctgca caagtcggat gcgggagccg
     1741 tcatgcttgg cgtggcgggt gacgatgcgg tccgggcggc gtgggcctcg atctttgcca
     1801 atgtgcaggc ctacgggcat ccggatccgc tcgaaggcgt cctcgtggcc gagcaggtga
     1861 gcggcggcat cgagcttgcc ctcggggtcc accgcgatcc cgagatcggc ctggtggtca
     1921 tggccggcgc cggcggcgtc ctcctggagc tgatcaagga tgccagtttc gcggtgccgc
     1981 cgatcacccc ggacaaggcc cgcaatctgc tggcgcagac ccgcgtcgcc aagctgatgg
     2041 ccggctaccg cggcgcacgg ccatcggaca cggacgccgt cgtgcaggcg ctgcttgcct
     2101 tggggcgcat cgctgacgac cttcgcgacg tcgtcgaatc gatcgacatc aaccccttcg
     2161 tggcgttgga gcaggggggc cgcgtgctcg acgcgctggt cgtcctgcga aacgtcggct
     2221 gacctgacgc ggcattaccc ggatgcgcgc gagcagcgag ctcgacgacg acattccgtc
     2281 gcgccggcgt catcgaagcg atgacgcgaa taagccttgc ctcagcgcgc gtttgcgcaa
     2341 cgaagcgacg ttgtcgatgc gtgcggtctt cgcgtcggcg tcgttcaaat tcgcgcgcgt
     2401 ttcgcgtcat gcttgaccaa ctcgcgcgca ttggccaatg tgttcgcatg gcagcgcttc
     2461 agttcgcaga gcgaacaagc tgccgttcca aatcaacaag aaatcgatag ggtagggatg
     2521 aacgcgcgca tgaacctcac ggaccacctc cggagcggcg gcctgagggt ccggttctga
     2581 tgcggaacat gaatgaaggc ttcgcggggt cagcctttcg ttcccccgag agcgtgttgc
     2641 gcgcctcgtc ggtcgccatc gtgggggcct ccgagcgggg caaatggccg aaacagatct
     2701 acgcgaacct gcgcgagcac ggttatcccg gcccggtcta tctgatcaat ccgcgccagc
     2761 aggaggtgtt cggcgagcgc gcctatccct cgctgcgcga gctgcccggg aaggtcgatc
     2821 atgcgatcgt catcgtgccc gcggcggcgg tgccgaaggt tctcgaagac gccgagcagg
     2881 cgggccttgc gtccgcgacc gtctatgcgg ccggtctcgg cgacggcgac gacccgggct
     2941 ccaaggagcg cggcgtgtgg ttgcgggagt tcagcagcaa gagccgcatg cgcatcgccg
     3001 gccccaactg catgggtgcc cacagctatc gcgagcgctt tttggcctac cccaacggtg
     3061 acctggcacg tcttccgccc ggtcctctcg cctgcatctt ccagtcgggc ggcacgctcc
     3121 agttctggat gaagtccgcg gccgaccgcg gcatccgctt ctcctacggc atttcgtccg
     3181 gcaacgagag cgatctcgat ctcgccgact atctcaattt cgtcgtcgac gatccggaga
     3241 cgcggcacat cgtcctgttc atcgaaggca tccgccggcc cgaggcgttc atgcaggcgg
     3301 cggcccgggc gctggccgcc ggcaagccga tcatcgccat caagaccggc gccaccatgc
     3361 gctcgcgcat ggccgcgcaa tcgcataccg gcgccatcgc cggcgactac gccgcctacg
     3421 tcgccatgtg cgagcgctac ggcatcgtca attgccgcaa cctcgaggac ctgctcgaga
     3481 cggcgctcgc cttccagtgc aaccgcctgc cgcgcggccc ccgcatcggc ttcgtcacca
     3541 cttcgggagg caccgtcgac ctgctctacg actacgccga ggccgaaggc gcggtgatgc
     3601 ccgctttcgc ggagagcacg ctcgaggcgt tgcggccgca tatgcaggag ggcatcacgc
     3661 ccaagaaccc gctcgacctc ggcattcctt cgaccctcgc cgcggcggcc gacgtttgcg
     3721 agatcgtgct gcgcgatccg aatgtggaca tgctggcatg ggccgggcag ctgccccgga
     3781 agaaagaggc atggccggac gtcacgccgc tgcagcgcct tccgaccgtc accgacaagc
     3841 cgatcctcgc cttcggccgc atggtctacc aggtgacgcc gggctcgatc gagctgcagg
     3901 acgcggtcgg tttcccgttc ctgcaaggtc tggagccgac cttgcgcgcg ctcaacgcgc
     3961 tctcgttcta tgccgagcgg cagggccggg cgccagcggc gctgccgccg gcgaaaccag
     4021 gccggctctc gcccgagacg ctggatgcga ccctcgccca atacgggatc gcgctgccgc
     4081 agagccgcag cgtgggcccc gtcgcggacg ccgtcgcggc ggccgaggcg atcggtttcc
     4141 cggtggcgct gaagatccgc tcgccggaca tcctgcacaa gaccgaagcc ggcggcgtgg
     4201 tgctcggcct caccaccggc gtgatggtgc agcaggcggc ggagcgcctg ctcgcgtccg
     4261 ccggggcggc ctatcctggc gcccgcatcg acggctt
//
LOCUS       DATAIQ010000213         1716 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_10687, whole genome shotgun sequence.
ACCESSION   DATAIQ010000213 DATAIQ010000000
VERSION     DATAIQ010000213.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1716)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1716)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1716
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10687"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..270)
                     /locus_tag="VHN20_03675"
     CDS             complement(<1..270)
                     /locus_tag="VHN20_03675"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX2724902.1"
                     /translation="METAIVTGASRGIGRAIAKELARTHRVVATYRGRRDAAESLQAE
                     IGCEIFQCDIGSTADREALLAFTQEKAGRLDLLVNNAGMAPRERRD"
     gene            complement(270..1067)
                     /locus_tag="VHN20_03680"
     CDS             complement(270..1067)
                     /locus_tag="VHN20_03680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724903.1"
                     /translation="MLHRTLLCAALVCLPAAADILTLRSGRSVEGTYLGGDARQIRMA
                     LDDRVETFPVSDVTELRFGSVEKAAAPRRAERVELMRPERAETRTGSRAESGGPSVEI
                     PAGTAIVIRMIDDVDSERNRVGETFRASIDEPVIAGERTVIARGANVVVKLIDDKEAG
                     RLSGKTELTLDLVSVEANGRMVDILTQEVTQASESRTAQTARRAGGLAAAGAVIGAIA
                     GGGKGAAIGAVTGAATGGAVQVMTKGPRVRIPSEARLTFTLEQPVRL"
     gene            complement(1090..>1716)
                     /locus_tag="VHN20_03685"
     CDS             complement(1090..>1716)
                     /locus_tag="VHN20_03685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724904.1"
                     /translation="ERGTPVAPGGFVFHPDTPEVTVREILDRRPELSLALSRNLPVFR
                     GPVVKDIMTQVSKENALFSVATALPYIMPLVSLPWAIGEFASDTAFLTINQIRMAFML
                     AAASDCPVGFREQKAEVASIVAGAFGWRAISRELVGKIPMGGGLLPKAAIAYAGTFVA
                     GLSLERLYNIGYGLSEAERKTAYERAYDSGKQVAESLVKTYTRMRSAS"
BASE COUNT          258 a          614 c          552 g          292 t
ORIGIN      
        1 gtcgcgacgc tcgcgcggcg ccatcccggc gttgttgacg agcaggtcga gacgcccggc
       61 cttttcctgg gtgaaggcga gcagcgcctc ccgatccgcc gtcgatccga tgtcgcactg
      121 gaagatttcg cacccaatct cggcctgcag cgattcggct gcgtcgcgcc ggcccctgta
      181 ggtcgcgacc acgcggtgtg tccgtgccag ttcctttgct atggcgcgtc cgatgccccg
      241 gctcgcaccg gtgacgatgg ccgtctccac tacaaccgca ccggctgctc gagggtgaac
      301 gtcaggcgcg cttcggaggg gatgcgcact cgcggcccct tggtcatcac ctgaacggcg
      361 ccgcccgtgg ccgcgccggt taccgcaccg atcgccgcgc ccttgcctcc accggcgatt
      421 gcgccgatca ccgcgccggc tgccgcgaga cctccggcgc gccgcgccgt ctgcgccgtg
      481 cgcgattcgc tcgcctgcgt cacttcctgc gtcaggatgt cgaccatgcg cccgttcgcc
      541 tcgacggaaa ccaggtcgag cgtcagctcg gttttacccg acagccgccc cgcctctttg
      601 tcgtctatca gcttgacgac tacgtttgcg ccgcgcgcga tcaccgtacg ctcgcccgcg
      661 atcacgggct cgtcgatgct cgcccggaac gtctcgccga cgcggttgcg ctccgaatcg
      721 acgtcgtcaa tcatccggat cacgatcgcc gtgcctgcgg gaatctcgac cgagggcccg
      781 ccgctctccg cgcgtgaccc ggttcgcgtc tccgcccgct caggccgcat caactccacg
      841 cgctcggcgc gccgcggtgc cgccgccttt tcgacgctcc cgaagcgcag ctcggtcaca
      901 tcggagaccg gaaatgtttc aacgcgatcg tcgagcgcca tccggatctg gcgcgcgtcg
      961 ccgccgaggt atgtgccttc gaccgagcgt ccgctgcgaa gtgtcaggat gtcggcggcg
     1021 gctggcagac agaccagtgc cgcacaaagt agcgtgcgat ggagcatatc tgcaatctta
     1081 gccgagcggc taagacgccg aacgcatgcg tgtgtaggtc ttgaccagcg actcggcgac
     1141 ctgcttgccc gaatcgtagg ctcgttcgta ggcggtcttg cgctcggctt cgctcaagcc
     1201 gtagccgatg ttgtacagcc gctcgagcga cagcccggcg acgaaggttc cggcataggc
     1261 gatcgccgcc ttgggaagaa gccctccgcc catcgggatc ttgccgacca gttcgcgcga
     1321 gatcgcgcgc cagccgaaag cgcccgccac gatcgaggcg acctccgcct tctgctcgcg
     1381 gaatccgacc gggcaatcgc tcgccgccgc gagcatgaac gccatgcgga tctggttgat
     1441 ggtcaggaaa gcggtgtcgg acgcgaactc gccgatcgcc cagggcagcg acaccagcgg
     1501 catgatgtag ggcagcgcgg tcgccaccga gaacagggcg ttctctttcg acacctgggt
     1561 catgatgtcc ttgaccaccg gacctcggaa taccggcagg ttgcgcgaga gcgccaggga
     1621 cagctcgggc cggcggtcga gaatctcgcg gacggttacc tcgggcgtgt ccgggtggaa
     1681 cacgaagccg ccgggcgcga ccggcgtccc gcgctc
//
LOCUS       DATAIQ010000214         1538 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_287921, whole genome shotgun sequence.
ACCESSION   DATAIQ010000214 DATAIQ010000000
VERSION     DATAIQ010000214.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1538)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1538)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1538
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_287921"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(80..1282)
                     /locus_tag="VHN20_03690"
     CDS             complement(80..1282)
                     /locus_tag="VHN20_03690"
                     /EC_number="2.7.7.60"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008685 - 2-C-methyl-D-erythritol
                     2,4-cyclodiphosphate synthase activity [Evidence IEA];
                     GO_function: GO:0050518 - 2-C-methyl-D-erythritol
                     4-phosphate cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016114 - terpenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase/2-C-methyl-D-erythritol
                     2,4-cyclodiphosphate synthase"
                     /protein_id="HEX2724905.1"
                     /translation="MSVAAIIVAAGRGSRAGGGIPKQFRPLAGRSALNRVLEVFLSHP
                     AVDRVQAVVDPSDREHVETALAGLPSESTRLAAPPVPGGATRQASVRQGLEALAREQP
                     APALVLVHDAARPFPSLSLIDRAIAAGRAHGAAVPGLAVTDTIKLVDRDGLVRETPPR
                     DALRAIQTPQAFAFAALLGAHRAAAKAGLDTFTDDGALAEWAGLPVTVFAGDPDNIKL
                     TRESDFAEAERRIGGGAPVHVTRVGTGFDVHAFAPGDHVWLGGLRVAYERGVLAHSDG
                     DVVLHALTDALLGALGDGDIGVYFPPSDAQWRGVSSDRFLASAVERVRARGGVIDHLD
                     VTVLCEAPRVGPHRDAMRARIAEIAAIGRDAVSIKATTTEKLGFIGRGEGLAAQAVAT
                     IRLPTGRS"
BASE COUNT          239 a          513 c          555 g          231 t
ORIGIN      
        1 gcggtggcga cgcgcagcct ctgcgcttcg caggatttga gccgcgctgc ggcgcgcgcg
       61 agcagagcag gggacaccgt catgagcggc cggtcggcag gcgaatggtg gccacggcct
      121 gcgcggcaag gccttcgccg cggccgatga agccgagctt ttcggtcgtc gtcgccttga
      181 tcgacacggc gtcgcgcccg atcgccgcga tctcggcgat gcgcgcgcgc atggcatcgc
      241 gatgcgggcc gacgcgcggg gcttcgcaca gcacggtgac gtcgagatgg tcgatcacgc
      301 caccccgcgc gcgcacccgt tcgacggcag aggcaagaaa gcggtcggac gacacgccgc
      361 gccattgcgc atcgctcggc ggaaaataca cgccgatgtc gccgtcgccg agggcgccga
      421 gcagcgcgtc cgtgagcgca tgcagcacca cgtcgccgtc ggaatgagcc agcacgccgc
      481 gctcataggc cacgcgcaag ccgccgagcc agacatggtc acccggcgcg aaggcatgca
      541 cgtcgaagcc ggtgccgacg cgcgtgacat gcacgggtgc gccgccgccg atgcggcgct
      601 cggcttcggc gaagtcggac tcgcgcgtca gcttgatgtt gtccggatcg ccggcgaaga
      661 cggtgacggg caggccggcc cattcggcga gcgcgccgtc gtcggtgaac gtgtcgagac
      721 ccgctttcgc ggcggcgcgg tgggcgccga gcagcgccgc gaaggcaaat gcctgcggcg
      781 tctggatcgc gcgcagggcg tcgcgcggcg gcgtctcgcg caccaggccg tcccggtcga
      841 cgagcttgat cgtgtcggtg acggcgaggc cgggcacggc ggcgccgtgc gcccggccgg
      901 ccgcgatggc gcgatcgatc agggacaggc tcgggaatgg ccgggcggcg tcgtgaacca
      961 ggaccagcgc cggggcgggt tgctcccggg cgagagcttc gaggccttgc cggaccgaag
     1021 cctggcgggt ggcgccgcct ggcacggggg gcgccgccag cctggtcgat tcggacggca
     1081 gcccggccaa agcggtttca acgtgttcgc gatcggacgg gtcgaccacg gcctggaccc
     1141 ggtcgacggc gggatgcgac aaaaagacct caaggacccg attcagcgcg gatcggcccg
     1201 ccagagggcg aaattgcttt ggaatccccc ctccggcccg cgatccgcgt cctgccgcaa
     1261 cgataatcgc cgccactgac atcgttttcc cgggatccct caagacgggt gcctccctcg
     1321 ataagctttc gttttgacga acgcaaaccg aacgtgcttg ccttgggaca gcttttggct
     1381 agttattagg cagaatgata tttgatgata atttaggcga acgcgccgtg agcattgggc
     1441 agatctcgtt gcgcggccaa gccgttctcg ctcccctgtc aggtgtcacc gacgtcgttt
     1501 tccgccgcat cgccaggcgc ttcggggctg ctctcgtg
//
LOCUS       DATAIQ010000215         1587 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_287963, whole genome shotgun sequence.
ACCESSION   DATAIQ010000215 DATAIQ010000000
VERSION     DATAIQ010000215.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1587)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1587)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1587
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_287963"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            109..564
                     /locus_tag="VHN20_03695"
     CDS             109..564
                     /locus_tag="VHN20_03695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015931033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GatB/YqeY domain-containing protein"
                     /protein_id="HEX2724906.1"
                     /translation="MRERFTQEMKDAMKAGDKRKLSTVRLIQAALKDKDIEARGAGKG
                     QASEEEILGLLQKMIKQRQESAGIYEQAGRAELATQEREEAEIIAAFLPKQMDEAETR
                     RAIEAAVAETGAASMKDMGKVIGALRGKYAGRMDFAKASALVKDILPKG"
     gene            603..899
                     /locus_tag="VHN20_03700"
     CDS             603..899
                     /locus_tag="VHN20_03700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019906505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2293 domain-containing protein"
                     /protein_id="HEX2724907.1"
                     /translation="MSRRAAIEAALRELAPRIPAHEFAAVCDHAVDSSGLRTASAPVA
                     AWLSLVAYVRHVFTDYDALLGEGYDADSARFFVVAEIDTVLEGWGVQRRVGDGD"
     gene            1072..>1587
                     /locus_tag="VHN20_03705"
     CDS             1072..>1587
                     /locus_tag="VHN20_03705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020093532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003896 - DNA primase activity [Evidence
                     IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CHC2 zinc finger domain-containing protein"
                     /protein_id="HEX2724908.1"
                     /translation="MRYPPAVLDEIRARLPVSAVVGKRVRMKKAGREWKGLSPFNAEK
                     TPSFYVNDQKGFYHCFSSGKHGDIFTFLMETEGLSFPEAVERLAAEAGVALPTPSREA
                     QAQETRRRSLHDVTELAAQFFESALQDRRAARAREYLVQRGLGPETQRRFRIGYAPGE
                     RFALRDHLAGKG"
BASE COUNT          261 a          522 c          565 g          239 t
ORIGIN      
        1 tatggcggcc agcggccccg tcgcgggcca ttcgggccgt cgcggctgac ttaaggagct
       61 gcatcggctc cgtcaacgac ggcagccttc ttcccaagga gatccgccat gcgcgagcgc
      121 ttcacgcagg aaatgaagga cgccatgaag gcgggcgaca agcgcaagct ctcgacggtg
      181 cgcctgatcc aggcggccct caaggacaag gacatcgagg cccgcggcgc cggcaagggc
      241 caggcgagcg aagaggagat cctcggcctc ctgcagaaga tgatcaagca gcgccaggaa
      301 tcggccggca tctacgagca ggccggccgg gccgagcttg ccacccagga gcgcgaggag
      361 gccgagatca tcgccgcgtt cctgccgaag cagatggacg aggccgaaac ccgccgggcc
      421 atcgaggcgg ccgtcgccga gaccggcgcc gcttcaatga aagacatggg caaggtgatc
      481 ggcgccctgc gcggcaagta tgccgggcgc atggatttcg ccaaggcgag cgccctcgtg
      541 aaggacatcc tgccgaaagg ctgattggcc cgacgccggg ccggtccgcg agggaagaag
      601 ccgtgagccg ccgcgccgcg atcgaggccg ccctgcgcga gctggcgccg cgcatcccgg
      661 cgcacgaatt cgcggccgtg tgcgaccatg ccgtcgacag ctccgggctg cgcaccgcct
      721 ccgcgccggt ggcggcgtgg ctgtccctcg tcgcctacgt gcgccacgtc ttcaccgact
      781 atgacgcgct gctgggcgag ggctatgacg ccgacagcgc ccgcttcttc gtcgtcgccg
      841 agatcgatac cgtgctcgag ggctggggcg tgcagcggcg cgtcggcgac ggcgattaag
      901 ccgcgttgct gcggcagcgg gcccgttccg cggccccagg gcgtcgcgca gcagtggatc
      961 actgtggata tcgaggacgc ttgcgctcgt gttcttattt tgttctgtgg atgagtgtgg
     1021 gtgcgtctga ttcgcgctgc atgtttcggt tcactcgtgc gtaggtgaag ggtgcgctac
     1081 cccccagccg ttcttgacga gattcgcgcc cggctgccgg tgtcggcggt ggtcggcaag
     1141 cgcgtgcgca tgaaaaaagc ggggcgcgag tggaagggcc tgtcgccctt caatgccgaa
     1201 aagaccccgt ccttctacgt caacgatcag aagggcttct atcactgctt ctcgtcaggg
     1261 aagcacggcg acatcttcac cttcctgatg gagaccgaag ggctgtcctt ccccgaagcg
     1321 gtggagcggc tcgcggcgga agcgggcgtg gctctgccca ccccctcgcg cgaggcccag
     1381 gcccaggaga cgcggcgcag gagcctgcac gacgtcaccg aactggcggc gcagttcttc
     1441 gaaagcgcgc tgcaggaccg gcgggcggcg cgggcgcgcg aatatctggt gcagcgcggg
     1501 ctggggccgg agacgcaacg gcgcttccgc attggctacg cgcccggcga acgcttcgcc
     1561 ctgcgcgacc atctcgccgg caagggc
//
LOCUS       DATAIQ010000216         2240 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_426225, whole genome shotgun sequence.
ACCESSION   DATAIQ010000216 DATAIQ010000000
VERSION     DATAIQ010000216.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2240)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2240)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2240
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_426225"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..444
                     /locus_tag="VHN20_03710"
     CDS             <1..444
                     /locus_tag="VHN20_03710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724909.1"
                     /translation="VGRTRLFGAAGMPTRRALDDLVAATKRIAGAEHSGKGKGPANAT
                     SEPLTALRQAARSAGAGLTAAAIVSRPATARAVSRWARAWDKAAAAPSRGGARNALFA
                     TARQLAAAIAREFGVKVSAARLAPIGAAKNAGQTRRPSREVQQRL"
     gene            651..1109
                     /locus_tag="VHN20_03715"
     CDS             651..1109
                     /locus_tag="VHN20_03715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724910.1"
                     /translation="MARSTPAFRRFPATRIYRGQHASPRLITKQARLYRTRLRRAARG
                     KPNYAGIHALTMWGCGAQCLDGAVVNLVTGKVVFLPDGVSRCFDARPNSRLLMLANGG
                     FGGLAQTYAFYDFNGRRFRLVKLIKLPEDSAAATKLCRYGAPAVPSAYGY"
     gene            1212..>2240
                     /locus_tag="VHN20_03720"
     CDS             1212..>2240
                     /locus_tag="VHN20_03720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724911.1"
                     /translation="MTITRDVSDLDRAYGAAAVRSEASNNFLEQLMIADVLANRLEAA
                     TWAPGSHFARSPTMQGVVMAPGQIDAADPRFVNAYGAFRDAFEAVRDPKSLARLDPAR
                     AAQVLSAMDAWEAVASGLARGVSQGAEYWGNRDAMGRGARARHDELTGVNRGVATKVG
                     ATTFGPLHSAPMTNVERAAMMAARSRDHDVPLPAAAARTVAALGLGPMTPETVAAYES
                     IAGALPAGEAARVPAGVATLPSRAPSPSHDPSAFAPLQQAPMTGPVALVSPSVAGVAA
                     AERAAIFAPDAFGPPSTFEDRTFLGPDPSRFTPDPPGISRRGDAGPLMPGDVAVAPQI
                     ADELPPGSF"
BASE COUNT          352 a          786 c          767 g          335 t
ORIGIN      
        1 gtcggccgca cccggctgtt cggcgccgcc ggcatgccga cgcgccgcgc cctcgacgac
       61 ctcgtcgcag cgacgaaacg gatcgccggc gctgagcaca gcgggaaggg caaggggcca
      121 gcgaatgcca caagcgagcc gctcacggcg ttgcgccagg cggcccggag cgccggcgcc
      181 ggcctgaccg ccgccgccat cgtctcgcgt cccgccacgg cgcgcgccgt ttcacgatgg
      241 gcgcgtgcct gggacaaggc tgcggccgca ccctcgcgcg gcggcgcgcg caacgcgctg
      301 ttcgcgaccg cgcggcagct ggccgcagcg atcgcgcgcg agttcggggt gaaggtgagt
      361 gcggcgcgac tggcgccgat aggcgcggcg aagaacgccg ggcaaacccg tcgaccaagc
      421 cgggaagtgc agcagcgcct gtaggacgac tatccggaaa ggaaaattta ccctatattc
      481 gacgcagtgc ggcgccggtg cgcaggtccg tcatgcgtgt gcacgctctc atcacggcaa
      541 cggttctgtt cgcgctcgtt gcggggcaag cgaccgcggc ggctatcgtg acgggtacgg
      601 ttccggcggc gtcggctgcc tccgctttcg accaagacgc ccgaaagcgc atggcgcgca
      661 gcacgccggc attccggcgc tttcccgcga cccggatcta caggggacag catgcgagcc
      721 cgaggctgat cacgaaacag gcgaggctct accgaacccg gttgcgacgc gcggcccggg
      781 gcaagcccaa ttacgccggc atccatgccc tcaccatgtg gggatgcggc gctcagtgtc
      841 tcgatggagc ggtggtcaac ctcgtcaccg gcaaggtcgt gttccttccg gacggagtga
      901 gccgctgttt cgatgcacgc ccgaacagca ggctgctgat gctggccaat ggcggcttcg
      961 gcgggcttgc gcagacatat gccttctatg atttcaatgg gcgcaggttc cgcctcgtca
     1021 agctgatcaa gctgcccgag gacagcgccg cggcaacaaa gctgtgccgc tacggcgctc
     1081 ccgccgttcc gtccgcgtac ggatattgac ggcaggcgca aacgcgacgg caagccccgg
     1141 gtgacgcgac gcggcgccgg tcgagcaaca tcagccgccg ccctccacga acccatcagc
     1201 aggccacttg catgaccatc accagagacg tcagcgacct cgatcgcgcc tacggcgcag
     1261 cggccgtccg atccgaggcc agcaataact tcctcgagca gttgatgatc gccgacgttc
     1321 tcgccaaccg tctcgaggcg gcgacgtggg cgcccggcag ccacttcgcg aggagcccga
     1381 cgatgcaagg cgtcgtcatg gcgcccgggc agatcgacgc ggccgatccg cgtttcgtca
     1441 atgcctatgg cgcctttcgc gatgcattcg aggcagtgcg tgatcccaag tccctcgcca
     1501 ggctggatcc cgcgcgggct gcacaggtcc tcagcgccat ggacgcctgg gaagcggttg
     1561 cctcgggcct ggcgcgaggc gtctcgcaag gcgcggaata ttggggaaac cgggacgcga
     1621 tggggcgagg cgctcgcgcc cgccacgatg agctcaccgg cgtgaacaga ggcgtggcga
     1681 caaaggtcgg agcgaccacg ttcggtccgc ttcactcggc tcccatgacc aatgtcgagc
     1741 gggcggccat gatggccgcc cgctccaggg atcacgacgt gccgctccct gccgccgcgg
     1801 cacgcaccgt tgccgccctc ggcttgggcc cgatgacgcc tgagacggtt gcggcatacg
     1861 agtcgatcgc gggtgcgctt cccgccggcg aggcggcgcg cgtgccggcg ggtgttgcaa
     1921 cgctcccgtc gcgggctccg tctccctccc acgatccgag cgccttcgct ccgctccagc
     1981 aggccccgat gacagggcct gttgcgctgg tctcgccaag tgtcgcgggc gttgccgcgg
     2041 ctgaacgtgc tgcgatcttc gcgccggatg cctttgggcc gccatcgacg tttgaggacc
     2101 ggacattcct cggcccggac ccgagccgct tcacgcccga tcctccgggc atcagcagga
     2161 gaggcgacgc cgggcccctt atgcctgggg acgtcgctgt cgcgccgcag atcgccgacg
     2221 agcttccgcc gggaagtttt
//
LOCUS       DATAIQ010000217         1945 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_288127, whole genome shotgun sequence.
ACCESSION   DATAIQ010000217 DATAIQ010000000
VERSION     DATAIQ010000217.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1945)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1945)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1945
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_288127"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..897)
                     /locus_tag="VHN20_03725"
     CDS             complement(<1..897)
                     /locus_tag="VHN20_03725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003600751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX2724912.1"
                     /translation="MALAVIVPASAQDSWRHGLSLMGEPKYPVDFKEFAYVNPEAPKT
                     GLVRLGAQGSFDNFNLFVAGVKGDLENGVAVLLYDPLMTEALDEVGTEYGVLAEAVRY
                     PPDYSSVTYRLRAEARWHDGKPVTPADVIFSFTTLKANSPQYAFYYKNVAKAEQTAER
                     EITFTFSEKGNRELPQIVGQIPVLPKHWWEGTAPDGRKRDVTQTTLETPLGSGPYRLK
                     SFEAGRMASYERVADYWGKDLPVRRGTNNFAEIRFEYFRDSTVLLEAFRGDRYDWRSE
                     NSARNWATAYDFPAVKEGRVIKG"
     gene            complement(1057..1599)
                     /locus_tag="VHN20_03730"
     CDS             complement(1057..1599)
                     /locus_tag="VHN20_03730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018454698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c family protein"
                     /protein_id="HEX2724913.1"
                     /translation="MDAFERNKIAGAVLGTLLLAMSLHVLASILFQPKKPAVPGYDLP
                     VPQEQAAAHGGPAPAAAEPLPVLLAKADPAKGQASSRKCAACHDMTKGGPNKVGPALY
                     GIVGRPVASHPGFNYSAALKAKGGNWAYEDLDKFVHNPKQTVPGTTMAFAGIPPATER
                     ADLLSYLRTLSDNPAPLPTP"
     gene            1836..>1945
                     /locus_tag="VHN20_03735"
     CDS             1836..>1945
                     /locus_tag="VHN20_03735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012605510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HEX2724914.1"
                     /translation="MAHPIILIPARLAATRLPNKPLADMHGEPMIVHVWRR"
BASE COUNT          321 a          635 c          667 g          322 t
ORIGIN      
        1 ccccttgatc acccggcctt ccttgacggc aggaaagtcg taggccgtgg cccagttgcg
       61 ggcgctgttc tcgctgcgcc aatcgtagcg gtcgcccctg aaggcctcga gcagcaccgt
      121 cgagtcgcgg aaatactcga agcggatttc cgcgaaattg ttcgtgccgc ggcgcaccgg
      181 caggtccttg ccccagtagt cggcgacgcg ctcgtagctg gccatgcgtc cggcctcgaa
      241 gcttttcagg cgataagggc cggagccgag cggcgtctcg agcgtcgtct gggtgacgtc
      301 gcgcttgcgc ccgtccgggg cggtcccttc ccaccaatgt ttcggcagga ccgggatctg
      361 cccgacgatc tggggcagct cgcggttgcc cttctcggaa aacgtgaagg tgatctcgcg
      421 ctccgcggtc tgctcggcct tggcgacgtt cttgtaatag aacgcgtatt gcgggctgtt
      481 ggccttcagg gtggtgaagg agaaaatcac gtcggcgggc gtgaccggct tgccgtcatg
      541 ccagcgcgcc tcggcgcgca ggcgataggt caccgacgaa tagtccggcg gatagcgcac
      601 ggcttcggcc agaacgccgt attcggtgcc gacctcatcg agcgcctcgg tcatcagcgg
      661 atcgtagagc agcaccgcga cgccgttctc caggtcgccc ttcacgccgg caacgaacag
      721 gttgaagttg tcgaagctgc cctgcgcgcc gaggcgcacc agcccggtct tcggcgcctc
      781 cgggttgacg taagcgaact ctttgaaatc gacaggatat ttcggctcgc ccatgagcga
      841 taggccgtgc cgccaggaat cctgcgcaga cgcggggaca atgacggcaa gggcgatgac
      901 gacacaaaca aaacgacgga tcacgcgggc ctccgaggcg ggccagcctg gcgcggccgc
      961 cgattcttgg agcgggcgat tatgtcggct ttgcggagca cgacaaagca aaaggccggg
     1021 cgcagcccgg cctcgagcaa gatgtcgcgg cggacgtcac ggcgtcggca gcggcgcggg
     1081 gttgtccgac agcgtgcgca gatacgacag caggtcggcg cgctcggtcg cgggcggaat
     1141 gccggcgaag gccatcgtgg tgcccggcac cgtctgcttg ggattgtgca cgaacttgtc
     1201 gagatcctcg tatgcccagt tgccgccctt ggccttcaac gccgccgaat agttgaagcc
     1261 gggatgcgat gcgacggggc gcccgacgat gccgtagagg gcgggcccga ccttgttcgg
     1321 cccgcccttg gtcatgtcgt ggcaggcggc gcatttgcgc gacgacgcct gccccttggc
     1381 cgggtcggcc ttggccagga gcacgggcag cggctcggcg gcggccggcg ccggtccgcc
     1441 atgggccgcg gcctgctcct gcggcaccgg cagatcgtac ccgggcaccg ccggcttttt
     1501 cggctggaac aagatgctgg cgagaacgtg cagactcatc gcaagcaaga gcgtgcccaa
     1561 aacggcgccg gcgattttgt tgcgctcgaa cgcatccata aatgaaagct ccctggcgcc
     1621 cgcatgggca agaccggctc aaagatcgag ggccacgaac gcggcgccgt tgcttagcca
     1681 caagggtggg cgttgacaat gggggcggcg caggcggcga ggtcgcagcc gatgcttatc
     1741 ccctccccag cggccctctt caggggccgg accccggcga tgacaagctg ggccgcccct
     1801 gctaagcagc ggcccgtccc agctgaccgt gttccgtggc ccatcccatc atcctgatcc
     1861 cggcgcgcct agccgcgacg cgtctgccga acaagccgct tgccgacatg cacggcgagc
     1921 cgatgatcgt gcatgtctgg cggcg
//
LOCUS       DATAIQ010000218         1567 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_103256, whole genome shotgun sequence.
ACCESSION   DATAIQ010000218 DATAIQ010000000
VERSION     DATAIQ010000218.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1567)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1567)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1567
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_103256"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..438
                     /locus_tag="VHN20_03740"
     CDS             <1..438
                     /locus_tag="VHN20_03740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724915.1"
                     /translation="PYGILQSLVRESDLLATLQSVARVLARGGVFGVDLVPDLPVWKE
                     YRNKVRFRGTRRGGKSRITLVESVRQDRAKRLTLFEQEYVERRGRERRSRRFSLVFRT
                     LTVPQMTARLEKAGFRITAVLGDYDGEPWDPRADVWLILAEKC"
     gene            448..1197
                     /locus_tag="VHN20_03745"
     CDS             448..1197
                     /locus_tag="VHN20_03745"
                     /inference="COORDINATES: protein motif:HMM:NF001030.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEX2724916.1"
                     /translation="MSGHSKWASIKHKKGALDAKRGKIFTRIIKELTVAARTGGGDPD
                     MNPRLRTIIADAKAANMPAENIKRAIRRGTGEEPGVSYEEVTYEGYGPGGAAVIIDTL
                     TDNKNRTVGELRHLLEKHGGNLAAAGSVAWMFSKKGYIVVEKSKADEEKLMGAVLEAG
                     ADDLQDDGDNWEVLSAPDAFQGVRDAVKGLGIEPASAEVSMIPQNYVKLEGKTAQQMV
                     KLMEVLDDHDDVQHVWSNFDIEEKEIEASLA"
     gene            1194..>1567
                     /gene="ruvC"
                     /locus_tag="VHN20_03750"
     CDS             1194..>1567
                     /gene="ruvC"
                     /locus_tag="VHN20_03750"
                     /inference="COORDINATES: protein motif:HMM:TIGR00228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008821 - crossover junction DNA
                     endonuclease activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HEX2724917.1"
                     /translation="MKVFGIDPGSARTGYGCVQSDGSRHRMIACGAITIPASNAFPEK
                     LRIIHVELGSLLGRHRPDVVAIENLFHAANARSALKLGHARGVAMLAAVEAGVPIVEY
                     TPAEVKQSVVGYGRAEKGQVQS"
BASE COUNT          322 a          479 c          515 g          251 t
ORIGIN      
        1 ccctacggaa ttctgcagtc gctcgtccgc gaatccgatc tgctggcgac gctgcagtcg
       61 gtcgcacgcg tgcttgcgcg cggcggcgta ttcggcgtcg atctcgtgcc tgacctgccg
      121 gtctggaagg agtaccgcaa caaagtgcga tttcgcggta cgcgcagagg cggcaaatca
      181 cgcatcacgc tcgtggaatc ggtccgccag gatcgggcga agaggctgac gctgttcgag
      241 caggagtacg tcgaacggcg cggccgggag cggcggtcgc gccgtttttc gctcgtcttc
      301 cgcacgctga cggttccgca gatgaccgcg cgcctcgaaa aggccgggtt ccggattacg
      361 gccgtgctcg gagattacga cggagagccc tgggatccgc gggccgatgt ctggttgatc
      421 ctcgcggaga agtgctagaa tttcgccatg tcaggccact cgaaatgggc gtcaatcaag
      481 cacaagaagg gcgcgctcga cgccaagcgc ggcaagattt tcacccgcat catcaaagag
      541 ttgaccgtgg ccgcacgcac cggcggcggc gatcccgaca tgaatccgcg gttgcggacg
      601 attatcgccg acgcgaaggc cgccaacatg ccggccgaga acatcaagcg cgcgattcgg
      661 cgcggcaccg gcgaagaacc gggcgtcagc tacgaagaag tgacctacga gggatacggt
      721 cccggcggcg cagccgtcat catcgatacg ctgaccgaca acaagaaccg cacagtgggg
      781 gagctccgcc acctcctcga gaaacacggc ggcaacctcg cagcggcggg ctcggtggcc
      841 tggatgttca gcaagaaggg ctacatcgtc gtcgagaagt ccaaggctga cgaagagaaa
      901 ctgatgggcg ccgttctcga agccggcgcc gacgatctcc aggatgatgg cgacaactgg
      961 gaagtgctca gcgccccaga cgcattccag ggcgtgcgcg atgcggtcaa agggcttggc
     1021 atcgagcccg cctcggcgga ggtctcgatg attccgcaga attacgtgaa gctcgaaggc
     1081 aagaccgcgc agcagatggt caagctgatg gaagtgctcg acgaccacga cgacgtccag
     1141 catgtctggt cgaacttcga catcgaggaa aaggagatcg aggcctcgct cgcgtgaagg
     1201 tcttcgggat cgatcctggc tcggcgcgca ccggctacgg atgcgtgcag agcgatggca
     1261 gccgccatcg aatgatcgcc tgcggcgcca tcacgatccc tgcctcaaac gcgttccccg
     1321 aaaaactcag aatcatccac gtggagctgg gttccctgct cggccgccat cggcccgacg
     1381 ttgtggccat tgaaaatctg tttcacgcag ccaacgcgcg aagcgcgctg aagctggggc
     1441 atgctcgcgg cgtcgccatg ctggccgccg tcgaggcagg tgtccccatc gtcgaataca
     1501 cgcctgccga agtgaaacag tcggtcgtcg ggtacggccg cgccgagaaa gggcaggtgc
     1561 agtcaat
//
LOCUS       DATAIQ010000219         2450 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_103344, whole genome shotgun sequence.
ACCESSION   DATAIQ010000219 DATAIQ010000000
VERSION     DATAIQ010000219.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2450)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2450)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2450
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_103344"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..723)
                     /locus_tag="VHN20_03755"
     CDS             complement(<1..723)
                     /locus_tag="VHN20_03755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724918.1"
                     /translation="MENGGGIGASAAEPARTRRLFLVIALGLLIFLTVLLIVAWLARR
                     PIAEHFIERELERRGVQASYSIERIGLRDQVLRNVRIGDPARPDLTARFAHLQLRFKM
                     DGSFQVYRIVARGVRLRGQLLKTGRVSWGQVDKLLPPPSGKPFRLPDVAVDVADTTVA
                     LRTPYGNFGFAVSGAGNLTGGFKGRLATASARLAFGACGIERLRSSVRLAVVARRPQV
                     EGPLTASRFACPRSRLAIEAPAL"
     gene            835..1515
                     /gene="radC"
                     /locus_tag="VHN20_03760"
     CDS             835..1515
                     /gene="radC"
                     /locus_tag="VHN20_03760"
                     /inference="COORDINATES: protein motif:HMM:TIGR00608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadC"
                     /protein_id="HEX2724919.1"
                     /translation="MGQSDHHGQGHRARLRQRLFEGGESALLDHELVEYLLALAIPRR
                     DTKAQAKLLIDRFGGIGPLLAADAETLRREGLTDGVIGALKIAEASALRLLETRIEGR
                     PVLSSWDSLGDYLQARMGHSPVEEVRILFLNAKNMLLANEALWRGSVDEAAVHVREVI
                     ARAIALGATAIIIVHNHPSGDPSPSSQDIRLTRDLIEAGRHMKVAVHEHVIVGSQGRS
                     SLKALGLI"
     gene            1545..2027
                     /locus_tag="VHN20_03765"
     CDS             1545..2027
                     /locus_tag="VHN20_03765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724920.1"
                     /translation="MKSFFSSLWAGAALLVGTAAFLALMLWVARNHSRMWRRLAASYA
                     GPRRKGAIATRLETVVIAGRGTAQAFGHRQYSAVKLALFPDGLSAWAIPIPPLNVGCP
                     PLFLPFAEMTVAETDWMLWTDPAALRMRRSPEIDVMISRDTLRWIREHIDASPFGLAP
                     "
     gene            2070..>2450
                     /locus_tag="VHN20_03770"
     CDS             2070..>2450
                     /locus_tag="VHN20_03770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003602995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lyase family protein"
                     /protein_id="HEX2724921.1"
                     /translation="MVPRYSRPEMTVIWSAENRYRIWWAIEVFAAEAMGKIGMIPAED
                     AATIRKAYDDNALGEIDVAAIDNIEAVTKHDVIAFLTWAGEKLGPERRWLHQGMTSSD
                     VLDTSLAVQLKESADLLLSDLDALL"
BASE COUNT          397 a          864 c          812 g          377 t
ORIGIN      
        1 caatgccggc gcctcgatcg cgagcctgct cctggggcag gcaaagcggc tcgcggtcag
       61 cggcccttcg acctggggtc gcctggcgac caccgccagc cggaccgacg agcggagccg
      121 ctcaatcccg caggcgccga aggccagccg ggcactggcg gttgccaagc gccccttgaa
      181 tccgccggtg aggttgcccg cgccgctcac cgcaaagccg aagttgccgt agggcgtccg
      241 caaagccacc gtcgtgtcgg cgacgtcgac cgccacatcg ggtagccgga acggcttgcc
      301 gctcggcggt ggcagcagtt tgtcgacctg gccccagctg acccggcctg ttttgagcag
      361 ctgcccgcgc agccggacgc cgcgggcgac gatccggtag acctggaagc tgccgtccat
      421 cttgaagcgc agctggaggt gggcgaagcg ggcggtaagg tcgggccgcg ccgggtcgcc
      481 gatgcggacg ttgcgaagca cctggtcgcg aagcccgatg cgctcgatcg aatagctcgc
      541 ctggaccccg cgccgctcga gctcgcgctc gatgaaatgc tcggcgatcg gccgccgggc
      601 gagccatgcg acgatgagca ggacggtgag gaagatcagc agcccgagcg cgatcaccag
      661 gaacaggcga cgggtgcgcg caggctccgc cgcggacgcg ccgatccccc cgccattttc
      721 catccgctca gcagccatat cggcttacaa cccgtcgtat ccgccgccgt tccgttggcg
      781 gcacgaccgg gcgcgttgca ccccgccgcg caactgccta gcctcgccgc ggatatgggg
      841 cagtccgatc atcatggcca aggccatcgc gcgcgccttc gccagcggct gttcgagggc
      901 ggcgagagcg cgctgctcga ccatgagctg gtcgaatacc ttttggcgct ggcgattccg
      961 cggcgcgaca ccaaggccca ggccaagctg ctcatcgacc gtttcggcgg catcggaccg
     1021 ctgctcgccg ccgacgccga gacgcttcgc cgcgaaggcc tcacggacgg cgtgatcggc
     1081 gccctcaaga tcgccgaggc gagcgcgctc aggctgctcg aaacgcgcat cgagggccgg
     1141 cccgtcctct cgagctggga ctcgcttggc gactatctcc aggcgcggat gggtcattcg
     1201 ccggtcgagg aagtgcggat cctgttcctc aacgccaaga acatgctgct cgccaacgag
     1261 gcgctgtggc gcggcagcgt cgacgaggcg gcggtccacg tccgcgaggt catcgcccgc
     1321 gccatcgcgc tcggcgcaac ggcgatcatc atcgtccaca accacccctc tggcgacccg
     1381 agcccgagca gccaagacat ccgcctgacc cgcgacctga tcgaggccgg gcggcacatg
     1441 aaggtcgcgg tccacgaaca tgtcatcgtc ggcagccagg ggcgcagcag cttgaaggcg
     1501 ctggggctga tctagatgat cgcacgtctc ccgacgacag gcagatgaag agtttctttt
     1561 cgtccctgtg ggctggcgcc gcgctgctgg tcgggaccgc cgccttcctc gcgctgatgt
     1621 tatgggtggc gcgcaaccat tcgcgcatgt ggcgaaggct tgccgccagc tatgctggcc
     1681 cgcgccgcaa gggcgccatc gcgaccaggc tggaaaccgt cgtcatcgcc gggcgaggca
     1741 ctgcacaggc gttcggccat cgccaatatt ccgccgttaa gctcgcgctc ttccccgacg
     1801 gcctgtcggc atgggcgatc cccatcccgc cgctcaatgt cggctgtccg cccctgttcc
     1861 tgccgttcgc cgagatgacg gtggcggaga ccgactggat gctgtggacc gacccggccg
     1921 cgttgcggat gcgccggtcg ccggaaatcg acgtcatgat cagccgcgac accctgcgct
     1981 ggatccgcga acatatcgac gccagcccct ttggcctggc cccctagacg gtttgcgatt
     2041 gccggcggcc cctgctagcc gcccacgcca tggtcccccg ctactctcgc ccggaaatga
     2101 cggtcatctg gtcggccgag aaccgttacc gcatctggtg ggcgatcgag gtgttcgcag
     2161 ccgaggcgat gggcaagatc ggaatgatcc cggccgagga cgcggcgacc atccgcaagg
     2221 cctatgacga caatgcgctg ggcgagatcg acgtcgccgc gatcgacaat atcgaggcgg
     2281 tgaccaagca tgacgtcatc gccttcctca cctgggccgg cgagaagctc ggccctgagc
     2341 gccgctggct gcaccagggc atgacctcga gcgacgtgct cgacaccagc cttgcagtgc
     2401 agttgaagga gagcgccgac ctcctgctta gcgacctcga cgccttgctc
//
LOCUS       DATAIQ010000220         1800 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_426516, whole genome shotgun sequence.
ACCESSION   DATAIQ010000220 DATAIQ010000000
VERSION     DATAIQ010000220.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1800)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1800)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1800
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_426516"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..472)
                     /locus_tag="VHN20_03775"
     CDS             complement(<1..472)
                     /locus_tag="VHN20_03775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid methyltransferase"
                     /protein_id="HEX2724922.1"
                     /translation="MLQSFQRAASRKAPIGDRFEDEARFLRSWIERPLVTGAVTPSGK
                     MLARTMASYVDPRVPGPVIELGPGTGPVTDALVRRGVAQDRLVLVEYNPDFCKLLKRR
                     FPKAVIIQGDAYDIGEALDGVISEPGAAVISSLPLFTKPLKTRRRLLDAARELLH"
     gene            complement(532..1668)
                     /gene="dnaJ"
                     /locus_tag="VHN20_03780"
     CDS             complement(532..1668)
                     /gene="dnaJ"
                     /locus_tag="VHN20_03780"
                     /EC_number="1.8.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012335915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HEX2724923.1"
                     /translation="MSKRDYYEVLGVQKGASDADLKSAFRKLAMKYHPDKNPGDKDAE
                     IHFKEINEAYQTLSDAQKRAAYDRFGHAAFTQGGGGPGFGADFSDFMSDIFENFFGET
                     RGRGRGSAGRERGTDLRYNLEITLEEAFEGKTATVKIPTAVTCEGCSGTGAKAGSKPR
                     QCPTCGGHGRVRATQGFFSIERTCPNCHGRGEVIDDPCESCGGAGRITRERTLSVNVP
                     AGVEDGTRIRLAGEGEAGLRGGPSGDLYIFLSMKPHQFFQRDGADLFCRVPVSMVSAA
                     LGGEFSVPTLDGSQAKVKVPEGTQSGKQFRLRGKGMPVLRARDVGDLYIQVVVETPQK
                     LTKRQRELLTEFERASSDETHPESSGFFSRMREFFDGLSGSSRV"
BASE COUNT          315 a          579 c          590 g          316 t
ORIGIN      
        1 gatgcagcag ctcgcgggcg gcgtcgagca gacgacggcg ggtcttcaga ggcttcgtga
       61 acagcggcag gctggagatc acagccgcgc ccggctcgct gatcacgcca tcgagcgctt
      121 cgccgatgtc gtaggcgtcg ccctggatga tcaccgcctt ggggaagcgg cgcttgagca
      181 gcttgcagaa atcgggattg tattcgacca gcacgagccg gtcctgggcg acgccgcggc
      241 gcacgagcgc gtcggtgacc gggccggttc cgggccccag ctcgatcacc gggccgggca
      301 cgcgcggatc gacatacgac gccatggtgc gcgccagcat cttgccggag ggtgtcacgg
      361 cgccggtcac gagcgggcgt tcgatccagg aacgcaggaa gcgcgcttcg tcctcgaagc
      421 gatcaccgat cggagccttg cgggaggctg cccgttggaa cgactgaagc acgatacaat
      481 cccctggcgg cgtgattaat cacatagcca ttgaacacgt attaacgggc attacacccg
      541 acttgatcca gagaggccgt cgaaaaattc gcgcatgcgc gaaaagaatc cactgctttc
      601 tgggtgagtc tcgtccgaag atgcccgttc gaactccgtc agcagttcgc gctgccgctt
      661 cgtcagcttc tgcggcgtct cgacgacgac ctggatatag aggtcgccga cgtcacgcgc
      721 gcgcagcacg ggcatgccct tgccgcgcag acggaactgc ttgccggatt gcgttccctc
      781 cgggaccttg accttcgcct gcgagccatc gagcgtcggc acgctgaact cgccgccgag
      841 cgctgccgat accatggaga cgggcacacg gcaaaacagg tcggcgccgt cgcgctggaa
      901 gaactggtgc ggcttcatcg acaggaagat gtagagatcg cccgaggggc ccccgcgcag
      961 gcccgcctcg ccttcaccgg cgagacggat gcgcgtgccg tcctcgacgc cggccggcac
     1021 gttgaccgac agcgtgcgct cgcgcgtgat gcgtcccgcc cctccgcacg actcgcacgg
     1081 gtcgtcgatc acctcgccgc gcccgtggca gttcgggcag gtgcgctcga tcgagaagaa
     1141 gccctgggtg gcgcgcacgc gcccgtggcc gccgcaggtt gggcattgcc gcggcttcga
     1201 gccggccttg gcgccggttc cggagcagcc ctcgcaagtg acggcggtcg ggatcttgac
     1261 ggtcgcggtc ttgccttcga atgcctcttc cagcgtgatc tcgagattgt agcggaggtc
     1321 ggtgccgcgc tcgcgccctg ccgagccgcg gccgcggccg cgtgtctcgc caaaaaagtt
     1381 ctcgaagatg tccgacatga agtcggaaaa atcggcgccg aagccggggc cgccgccgcc
     1441 ctgcgtgaag gcggcatggc cgaagcggtc ataggcggcg cgcttctgcg cgtccgacag
     1501 cgtctgatag gcctcgttga tttccttgaa atggatttcc gcgtccttgt cgcccgggtt
     1561 cttgtccggg tggtatttca tggcaagctt gcggaaggcg gacttcaggt ccgcgtcgct
     1621 ggcgcctttc tgaacgccga gaacctcgta atagtcgcgc ttggacatca gcgcagaccc
     1681 ttcacgagat ccgcacgtga gaaaatccac atccaaacag gggaggtctt atcttggtct
     1741 gttagactag aaataagtcg cctgtcattt tgcacaccaa tgagccagcg ctccaagcag
//
LOCUS       DATAIQ010000221         2724 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_426525, whole genome shotgun sequence.
ACCESSION   DATAIQ010000221 DATAIQ010000000
VERSION     DATAIQ010000221.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2724)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2724)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2724
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_426525"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..543)
                     /locus_tag="VHN20_03785"
     CDS             complement(<1..543)
                     /locus_tag="VHN20_03785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ELM1/GtrOC1 family putative glycosyltransferase"
                     /protein_id="HEX2724924.1"
                     /translation="MVPDLTAWVLTDGKAGDEQPCIGVAEAIGISPEIRRVAPRAPVS
                     WLMPWGPIDPREAPGRPGSPIAPPFPDLLIATGRRAIPYVRAVKAASGGHTFTLILKD
                     PRTGPAAADLIWVPEHDGLRGPNVIATPTSPHRISAGRLAEARRDPDPRLAALPGRRV
                     AILAGGDSRHHRFTASDIERF"
     gene            complement(562..1065)
                     /locus_tag="VHN20_03790"
     CDS             complement(562..1065)
                     /locus_tag="VHN20_03790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017486728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724925.1"
                     /translation="MSPLSRRSFLLGTAALAGLGLAPPAFAQAAPSYFSSVEVDVRPL
                     HARGAGAYADYLGAVLLAETRRAFADRIGRGGPRLVVRVNSVSLSSYSGGGGGRFRGG
                     TFHSDYLDGEALIVDRRGTILARYPQLSAAPAHAVGAWYDPQLDQKRTVALAQHYASW
                     LRRTLGV"
     gene            complement(1086..1289)
                     /locus_tag="VHN20_03795"
     CDS             complement(1086..1289)
                     /locus_tag="VHN20_03795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011663473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724926.1"
                     /translation="MTDETANLILEHLRRMRGDLGELKADTLELKQRVGHLGNQYATI
                     SNRLDRMDMRLDRIERRLDLAEA"
     gene            complement(1349..1822)
                     /gene="greA"
                     /locus_tag="VHN20_03800"
     CDS             complement(1349..1822)
                     /gene="greA"
                     /locus_tag="VHN20_03800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012333189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0070063 - RNA polymerase binding [Evidence
                     IEA];
                     GO_process: GO:0032784 - regulation of DNA-templated
                     transcription elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HEX2724927.1"
                     /translation="MDKVPITIKGYSALEEELRHRQQVERPRIIQAISEARALGDLSE
                     NAEYHAAKESQAINEGRILELESLISRAEVIDVTKLSGDRIKFGATVKLVDEDTEEEK
                     TYQIVGEPEADVRSGRVSVTSPIARALMGKTVGDTVEVTTPGGGKSYEVTGVKFR"
     gene            complement(1918..>2724)
                     /locus_tag="VHN20_03805"
     CDS             complement(1918..>2724)
                     /locus_tag="VHN20_03805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006610479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl phosphate synthase large subunit"
                     /protein_id="HEX2724928.1"
                     /translation="ATIAELERQTRALALALDVGGLMNVQYAIKDGDIYVLEVNPRAS
                     RTVPFVAKVIGEPIAKIAARVMAGESLASFGLTPKELPHIGVKEAVFPFARFPGVDVL
                     LGPEMRSTGEVIGLDRSFGVAFAKSQLGGGTNVPKTGTVFVSVRDADKPRILPTIRML
                     SDLGFRILATGGTQRFLDENGVAASRINKVLEGRPHVVDAIKNGDIQLVFNTTEGAGA
                     LSDSRSLRRAALLHKVPYYTTLAGAIAAAEGILAYREGDLEVRALQEYFT"
BASE COUNT          435 a          904 c          947 g          438 t
ORIGIN      
        1 gaaacgctcg atatcgctgg ccgtgaagcg atgatggcgg ctgtcgccgc ccgccaggat
       61 cgcaacgcgc ctgccgggaa gcgcggcgag cctcggatcc ggatcgcgcc gggcctcggc
      121 cagccggccg gccgagatgc gatgcggcga ggtcggggtc gcgatcacgt tcggcccgcg
      181 cagcccgtca tgctcgggca cccagatcag atcggcggca gcgggcccgg tgcgcgggtc
      241 cttgaggatc agcgtgaagg tgtgcccgcc ggacgcggcc ttaacggccc gcacataggg
      301 gatggcgcgc ctgccggtgg cgatgaggag gtcgggaaag ggcggggcga tcgggctgcc
      361 gggacgcccc ggggcctcac gcgggtcgat cggcccccac ggcatcagcc acgagacggg
      421 cgcgcgcggc gcaaccctgc ggatctccgg gctgatgccg atcgcctccg ccacgccgat
      481 gcagggttgt tcgtcgcccg ccttgccgtc ggtcagcacc caggcggtca gatctggcac
      541 cacgacgcgt tgagctgcag gtcacacacc cagcgtgcgc cgcagccagc tggcatagtg
      601 ctgcgccagc gcgacggtgc gcttctgatc gagctgcggg tcgtaccacg ccccgacggc
      661 gtgggcgggc gccgccgaga gctgcgggta gcgcgcgaga atggtgccgc gccgatcgac
      721 gatcagcgcc tctccgtcga gataatcgga atggaaggtg ccgccccgga acctgccgcc
      781 gccgccgccg gaatagctgg agagggatac gctgttgacg cggacgacga gccgcggccc
      841 accgcggccg atgcggtcgg cgaaggcgcg ccgcgtttcg gcgaggagca cggcgccgag
      901 gtaatcggca taggcgccgg cgccgcgcgc gtgcagaggc ctgacgtcga cctcgaccga
      961 cgagaaatac gaaggcgcgg cttgcgcgaa ggctggcggg gcgagcccga ggccggcgag
     1021 agctgcggtt ccgaggagga agctgcggcg ggaaagaggc gacatggctg ttctccggac
     1081 ctgcgctacg cctcggccag atcgaggcgc cgttcgatac ggtcgagtcg catgtccatc
     1141 cgatcgaggc gattcgagat cgtcgcgtat tggtttccga gatggccgac gcgctgcttg
     1201 agctcgagtg tgtcggcttt caactcgccg aggtcacccc gcattcgccg gagatgctcg
     1261 aggatcaaat tggcagtttc gtccgtcatc agggctcacc gtccgtgtcc agcttagcac
     1321 gctggggcgg atccgccatc gcctgaggtc agcgaaactt cactcccgtc acctcgtagg
     1381 acttgccgcc gccgggcgtc gtcacctcga cggtatcgcc gacggtcttg cccatcaggg
     1441 cgcgcgcgat cggggaggtg accgaaacgc ggcccgaacg cacgtcggcc tcaggctcgc
     1501 cgacgatctg ataggtcttc tcctcctcgg tatcctcgtc gacgagtttc accgtggcgc
     1561 cgaacttgat gcggtccccg gacagcttgg tcacgtcgat cacctcggcg cgcgagatca
     1621 ggctctcgag ctcgaggatg cggccctcgt tgatggcctg cgattccttg gcggcgtgat
     1681 actcggcatt ctcagacagg tcgccgagag cgcgggcctc tgagatcgcc tggatgatgc
     1741 gcggccgctc cacctgctgg cggtgccgca gctcctcttc cagagccgag tagcccttaa
     1801 tcgtgatcgg taccttgtcc atatccgttg cctcaaaaca aaaatccgcg gcgcccccct
     1861 tcggtggcgc cgcgacgtca ttcttgaacc gtgccgcagc cttccggttc cacgcgctca
     1921 ggtgaaatat tcctgcaacg cgcgcacctc gagatccccc tcgcgatagg cgagaatccc
     1981 ctcggcggcg gcgatcgcac ccgcaagagt ggtgtagtac ggcaccttat gcaagagggc
     2041 ggcccgtctc agggaacgcg aatccgagag cgcaccggcg ccctcggtgg tgttgaagac
     2101 gagctggatg tcgccgttct tgatcgcgtc gacgacgtgg gggcggcctt ccagcacctt
     2161 gttgatgcgc gacgccgcga cgccgttctc gtcaaggaag cgctgcgttc cgccggtcgc
     2221 cagaatcctg aagccgagat ccgacagcat gcggatggtc ggcaggatgc gcggcttgtc
     2281 ggcgtcgcgc accgacacga agacggtacc ggtcttcggc acgttggtgc cgccgccgag
     2341 ctgactcttg gcgaaggcca cgccgaacga gcggtcgagg ccgatgactt ctccggtcga
     2401 gcgcatctcc gggccgagca gcacgtcgac gccgggaaaa cgggcgaacg gaaacacggc
     2461 ttccttgacg ccgatatgcg gcagctcctt cggcgtgagc ccgaacgagg cgaggctctc
     2521 gccggccatg acgcgggctg cgatcttggc gatcggctcg ccgatcacct tggccacgaa
     2581 cggcacggtg cgtgaggcgc gcgggttgac ctcgagcacg tagatgtcgc cgtccttgat
     2641 cgcgtattgc acgttcatca gaccgccgac atcgagcgcc agcgccagag cgcgggtctg
     2701 ccgttccagt tcggcgatcg tcgc
//
LOCUS       DATAIQ010000222         3345 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_11250, whole genome shotgun sequence.
ACCESSION   DATAIQ010000222 DATAIQ010000000
VERSION     DATAIQ010000222.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3345)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3345)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3345
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_11250"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(205..2277)
                     /locus_tag="VHN20_03810"
     CDS             complement(205..2277)
                     /locus_tag="VHN20_03810"
                     /inference="COORDINATES: protein motif:HMM:NF014763.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEX2724929.1"
                     /translation="MLAQARASVRIFLVAFATALLVPVLGFAAVILWNYAQSERAQFE
                     KQAQSAAQTLISAVDLELSKLQIAVEALGTSPSIYSGDYHAFHSQAREALQLWSPDAP
                     NKLAIVLRDLDSQQLVNTRVPWGQPLPKGSNPQVDRDVVRTRAAVIQGLFVGVTSGQA
                     IASIRVPVLRNGEATHVLSIAIDPDRFLDLLQRQGLSPDWVLTLVDQNDRVIARSRDH
                     ARFVAQLAPVEFRRTQTGDRGVWVGPNLDGTVVLGAYERSPLAGWRAFVGVPLDTAEG
                     PLRRSLWLIGALGLWALGLSYLLAVPFGRRIARSAEALSTAATRLGRGETVHAATSGL
                     REIDQVSEALASASLELRDREAALRATETRLRATHENAAVGMIEVDREGRIQYVNEAE
                     CKLTGLSRDELVGRDFAHSTLPSDVDRDRELFRRQVAGELHGYTIEKQHARADGSVGW
                     VRVSSTAVRDPHGHFVYAVRVVEDITERKDAEAQQRLLIEELNHRVKNTLATVQSLAF
                     QTFRHAESPKTARERFEARLMSLSRTHNLLNNSSWTGASLKDVVAVEIEPYVGEGAGR
                     VITGGPDVALTAPAALALGMTFHELATNAAKYGALSTSEGWVEIAWTIRTDDAGIRRL
                     KLRWSEHNGPTVAAPLARGFGSRLIEQSITQQLDGRVTLRFAPDGLACEIEIPLHGQD
                     DEAAEAAE"
     gene            complement(2437..>3345)
                     /locus_tag="VHN20_03815"
     CDS             complement(2437..>3345)
                     /locus_tag="VHN20_03815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007607611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HEX2724930.1"
                     /translation="DVISVVDRVGPAVVRVETKPRADQEPRGFGSGVAISPDGFVLTN
                     SHVVQGAREMRIATPDGLTLDATVLGDDPDTDLALLRASDGRALPFAPLGDSKRLKRG
                     QLVVAIGNPLGFESTVTAGVVSALGRSLRASTGRLIDDVIQTDAALNPGNSGGPLVSS
                     AGDVVGINTAVIRGAQGICFAVASNTAQFVLGELVRHGRVRRGYIGVAAQTVPLPRRL
                     TSRAGLANPAGALLASVEPGGPAAEAGLRVGDVVVAIDGEAVTGVDDLVRLLNGERIG
                     RNIEVRVVRQGAVVPQMLVPTQRSRR"
BASE COUNT          557 a         1136 c         1134 g          518 t
ORIGIN      
        1 ccttgtcgcg attttccggg actataagct tggccgtaag cgccgccaag acggctgtct
       61 cgcagcgcag cgtgccatca gccgcgagcg tgcgaagttg aacggtgccg agcccctcgg
      121 aaaatccgga tcaacggcag cgcgacgccg acgtggcgtt cacgccgaga gccacaaccg
      181 ggacaagctt gcggccacca agctctattc cgccgcttcc gcggcctcgt cgtcctgccc
      241 atgcagaggg atctcgattt cgcaggcgag cccgtcaggg gcgaaccgga gcgtcacccg
      301 gccgtccagt tgctgcgtga tgctctgctc aatgagacgc gagccgaaac ccctggcgag
      361 cggcgccgcc accgtcggac cgttatgctc gctccaacgc agcttcagtc ggcggatgcc
      421 ggcatcgtcc gtccggatgg tccacgcgat ctcgacccaa ccttcggacg tcgacaacgc
      481 cccgtatttt gcggcattgg tcgcgagctc atgaaaggtc atgccgaggg caagtgccgc
      541 cggggcggtg agggcgacgt ccggtccgcc cgtgatcacc cgtccggcac cctcgcccac
      601 ataaggctcg atctcgaccg cgacgacgtc cttgagggaa gctcccgtcc agctgctgtt
      661 gttgagcaga ttgtgggttc gcgacaggga catcaggcgt gcctcgaagc gctcgcgcgc
      721 ggtcttcggc gattccgcgt gcctgaaggt ttggaacgcg agggactgaa cggtcgccaa
      781 cgtgttcttg acgcggtggt tgagttcctc gatcagcagc cgttgctgcg cctccgcatc
      841 cttgcgttcg gtgatgtcct cgacgacgcg caccgcatag acgaaatgac cgtgcgggtc
      901 gcgcacagcg gtgctcgaga cgcgcaccca accgaccgat ccgtcggccc tggcatgctg
      961 cttttcgatg gtatagccgt gaagctcgcc ggcaacctgg cggcggaaca gctcacggtc
     1021 acgatcgaca tcggacggaa gcgtcgaatg ggcgaagtcg cgaccgacga gttcgtcacg
     1081 ggagagcccc gtcaacttgc actcggcttc gttgacatac tggatgcggc cttcgcggtc
     1141 gacctcgatc atgccgaccg cggcattctc gtgcgtcgca cgaaggcgcg tttcggtggc
     1201 tctgagcgcg gcctcacggt cgcgcagctc gagggacgcc gacgcgagcg cctcgctgac
     1261 ctgatcgatc tcgcgcagac ccgacgtcgc cgcatggacc gtctctccgc ggccgaggcg
     1321 cgtggcggct gttgagagcg cctccgccga gcgggcaatg cgccggccga acggaacggc
     1381 gagcaggtac gaaagcccga gcgcccacag gccgagcgct ccgatcagcc aaagggagcg
     1441 ccggagcggc ccctccgccg tgtcgagcgg cacccccacg aaggcgcgcc atcccgccag
     1501 cggcgagcgt tcataggcgc cgagcacgac ggtgccgtcc agattggggc cgacccagac
     1561 tccccggtcg ccggtctgcg tcctgcgaaa ctcgaccggt gcgagctgcg cgacaaagcg
     1621 cgcatggtcg cgcgaccggg cgattacgcg atcgttttga tcgaccagag tcaataccca
     1681 gtcaggcgac aatccttgcc gctgcaagag gtcgagaaag cggtccggat cgatggcgat
     1741 ggagaggaca tgcgtcgctt ctccgttcct gagaacgggc acgcggatac tggcgatcgc
     1801 ctgtcccgac gtcacgccga cgaacagccc ctggatcacc gcagccctgg tcctcacgac
     1861 gtcccggtcg acctgcggat tcgaaccttt cggaagtggc tggccccacg gcacgcgcgt
     1921 gttgacgagc tgctggctgt cgaggtcacg tagaacgatc gccagcttgt tgggggcatc
     1981 cggagaccag agctgcagcg cctcgcgcgc ctggctgtgg aaggcgtggt aatcgccgct
     2041 gtagatcgac ggtgacgtgc cgagcgcttc cacggcgatc tgcagcttcg atagctccag
     2101 gtcgaccgcg gagatgaggg tctgcgcggc gctctgcgcc tgcttctcga attgcgcgcg
     2161 ctcggactgc gcatagttcc acagaattac tgcggcgaag cccaaaaccg gcacgaggag
     2221 cgccgtggcg aaagcgacca ggaatatgcg gaccgatgcg cgcgcttgtg ccaacatgct
     2281 tttgcttcac cgccgccgga acactagcgc gcgattagca aaagtgcacc ccgcggtcgc
     2341 ccccgggccg aaatacggca aatgccctcg acggggggag gcagccggcg gtcggcgccc
     2401 ggcgggcgtg cctccagttc gcgactttcc agttcgtcag cgccggctgc gctgggtcgg
     2461 gaccagcatt tgcgggacca cggcgccctg acgcaccacg cgcacctcga tgttgcggcc
     2521 gatgcgttcg ccattgagca gccgcacaag gtcgtcgacg ccggtcacgg cctcgccgtc
     2581 gatcgcgacg acgacgtcgc cgacgcgcaa cccggcctcg gcagcaggac ctccgggctc
     2641 gacgctcgca agcagcgccc ccgcggggtt ggcgaggccg gcccggctgg tcagccggcg
     2701 cggcagcggg accgtctgtg cggcgacgcc gatatagccg cggcgcacgc gtccgtgccg
     2761 gacgagctcg cccagcacga attgcgcggt gttgctggcg acggcgaagc agatgccctg
     2821 ggcgccgcgg atcacggccg tgttgatgcc gacgacgtca cctgcggacg agaccagcgg
     2881 accgccggaa ttgcccgggt tgagcgccgc atccgtctgg atcacgtcgt cgatcagccg
     2941 gccggtgctg gcacgcaggg aacgcccgag cgccgacacg acgccggccg tgacggtcga
     3001 ctcgaagccg agcgggttgc cgatggccac gacgagctgc ccgcgcttga ggcgtttcga
     3061 gtcgccgagc ggcgcgaacg gcagcgcacg gccgtcgctc gcgcgcagca gcgccaggtc
     3121 ggtgtccgga tcgtcgccga gcacggtggc gtcgagcgtg agcccatcgg gcgtggcgat
     3181 gcgcatctcg cgggcgccct ggaccacatg actgttggtc agcacgaagc cgtctggaga
     3241 gatggccacg cctgagccga agccgcgcgg ctcctggtcg gcgcggggtt tcgtctcgac
     3301 gcgaactacc gccgggccaa cacgatcgac caccgagatg acgtc
//
LOCUS       DATAIQ010000223         1831 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_288460, whole genome shotgun sequence.
ACCESSION   DATAIQ010000223 DATAIQ010000000
VERSION     DATAIQ010000223.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1831)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1831)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1831
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_288460"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..232
                     /locus_tag="VHN20_03820"
     CDS             <1..232
                     /locus_tag="VHN20_03820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009492282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HEX2724931.1"
                     /translation="NVGLNDAVRSCNDGAELFTFWDYFAGSWQRNNGIRIDHLLLSPQ
                     ASDRLKGAQIHKETRTWEKPSDHVPVSVVLEV"
     gene            complement(264..1088)
                     /locus_tag="VHN20_03825"
     CDS             complement(264..1088)
                     /locus_tag="VHN20_03825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX2724932.1"
                     /translation="MRTSRLAAIALGAFLVGAFGPVSALDVPARPQGRGGPTARYASA
                     SEAVRSAVRDYNAGDKEGAAQALEFAAKQGHPLARWKLGRMYANGDGVPHDDLRAFEH
                     FSKIVDDNAEDAPDSPNAAAVANAYVALGTYFLEGIKGTYVRSDAGRAHDMFHHAASY
                     FGDANAQYSLARLYLDGTGVDPNPRQAARWFNLAAEKGHHPSQALLGHILVHGQKGVP
                     RQPPVGLMWLILAREAADPAKDRWISELYEKAVDVTSQADRQRALQLLELFLKRKR"
     gene            complement(1075..>1831)
                     /locus_tag="VHN20_03830"
     CDS             complement(1075..>1831)
                     /locus_tag="VHN20_03830"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012319877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HEX2724933.1"
                     /translation="EAGGIPLLMKTLLDAGFMHGDCMTVTGRTMAENLAKVPWNPDQD
                     VVRPATSPITPTGGVVGLKGNLAPEGAIVKVAGMPPEKQTFRGPARCFDGEEACFEAV
                     KNRTYKEGEVLVIRYEGPKGGPGMREMLSTTSALYGQGMGDKVALITDGRFSGATRGF
                     CIGHVGPEAAIGGPIGLLKDGDIIAIDAVKGTLYVELSDAELAARGKGWAPRESDFGS
                     GYIWKYAQTVGSAKDGAVTHPGGAKEKQSYADI"
BASE COUNT          264 a          627 c          639 g          301 t
ORIGIN      
        1 caatgtcggc ttgaacgacg cggtgcggag ctgcaacgac ggcgccgagc tgttcacgtt
       61 ctgggactat ttcgccggct cgtggcagcg caacaacggc atccgcatcg accacctgct
      121 gctgtcgccg caggcctccg atcgcctcaa gggcgcgcag atccacaagg agacgcgcac
      181 ctgggagaag ccctccgacc acgtgcccgt gtcggtcgtt ctggaggtct aatccctccc
      241 gcgaagcggg cgagggaccg cgctcagcgc ttgcgcttca ggaacagctc gagcagctgc
      301 agcgcccgct ggcggtcggc ctggctcgtc acgtcgacgg ccttttcgta aagctcggag
      361 atccagcggt ccttggccgg atcggcggcc tcgcgcgcca ggatcagcca catcaggcca
      421 accggcggct ggcgcggcac gcccttctgc ccgtgcacga ggatatgccc aaggagtgcc
      481 tgcgacgggt ggtggccctt ctcggccgcg aggttgaacc agcgcgccgc ctggcggggg
      541 ttcgggtcga caccggtgcc gtcgagataa agccgcgcca ggctgtactg ggcgttggcg
      601 tcgccgaaat aggaggcggc gtggtggaac atgtcgtgcg cacggcccgc gtccgagcgc
      661 acgtaggttc ccttgatgcc ttcgaggaaa tacgtcccga gagccacgta ggcattggcc
      721 acggcggcgg cattgggcga gtccggcgca tcctcggcat tgtcgtcgac gatcttcgag
      781 aaatgctcga acgccctcag gtcgtcatgc ggaacgccat cgccgttcgc atacatccgg
      841 ccgagcttcc agcgggcgag cgggtggccc tgcttggccg cgaactcgag cgcctgcgcg
      901 gcgccttcct tgtccccggc attgtagtcg cgcacggcgc tgcgcacggc ctcgctggcc
      961 gaggcgtagc gcgccgtcgg gccgccgcgc ccttgcgggc gcgccggcac gtcgagcgcg
     1021 gaaacgggac cgaacgcgcc gaccaggaat gcgccgagcg cgatcgctgc gagtctagat
     1081 gtccgcataa ctctgctttt ctttcgcgcc cccagggtgg gtgacggcgc cgtccttcgc
     1141 cgagccaacg gtttgcgcgt atttccagat gtagccggag ccgaaatcgc tctcgcgcgg
     1201 cgcccagccc ttgccgcggg ccgcgagctc ggcgtcggag agctcgacgt agagcgtgcc
     1261 cttgaccgcg tcgatggcga tgatgtcgcc gtccttgagc aggccgatcg gcccgccgat
     1321 cgccgcctcg ggcccgacat ggccgatgca gaagccgcgc gtcgcgccgg agaagcggcc
     1381 gtcggtgatc agggcgacct tgtcgcccat gccctggccg tagagcgccg aggtggtcga
     1441 cagcatctcg cgcatgccgg ggccgccctt cgggccctcg tagcggatga ccaggacctc
     1501 gccttccttg taggtgcggt tcttcaccgc ctcgaagcag gcctcctcgc cgtcgaagca
     1561 gcgggccgga ccccggaacg tctgcttctc ggggggcatg cctgcgacct tcacgatcgc
     1621 gccctcgggg gcgaggttgc ccttgaggcc gacgacgccg ccggtcgggg tgatggggct
     1681 ggtggcggga cggaccacgt cctggtcggg attccacggc accttggcca ggttctcggc
     1741 catggtgcgg cccgtcacgg tcatgcagtc cccgtgcatg aagccggcat cgagcagggt
     1801 cttcatgaga agcgggatgc cgcccgcctc g
//
LOCUS       DATAIQ010000224         2435 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_380411, whole genome shotgun sequence.
ACCESSION   DATAIQ010000224 DATAIQ010000000
VERSION     DATAIQ010000224.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2435)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2435)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2435
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_380411"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(119..195)
                     /locus_tag="VHN20_03835"
     tRNA            complement(119..195)
                     /locus_tag="VHN20_03835"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(159..161),aa:Arg,seq:acg)
     gene            complement(441..1880)
                     /locus_tag="VHN20_03840"
     CDS             complement(441..1880)
                     /locus_tag="VHN20_03840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HEX2724934.1"
                     /translation="MNVHPPHLPHLHAAGRRLSGIFGLSSRLLMLTILFVMVAEVLIY
                     VPSVANFRRNWLQDRVAAAQIAALALDAAPEDKITEELETRLLDGVGAQAIAVGGGGM
                     RRLLAKEYDVPPEVDRVIDLRSATWRDLIRGAFVTLFFPAERPIRVIGPAMGADFVEV
                     VLTEKPLRAAMVAFSRNILMLSLVISAITAGLVYLSLHWLIVRPVRRLSGNIAAFTTD
                     PENASRVLAPSERGDEIGLAEQAVARMEGVLSSELRQKRRLADLGLAVSKINHELRNM
                     LTTAQLLGDRIKDVDDPAVQRVAPRLVRTLGRAIDFCEATLAYGRASERLPQRRRMPL
                     APIVADLEDLTGLAPGAGIAFTADVPETLEIDADPEQLARILANLVRNAVQALSQAGT
                     GDGPPRVGLSARRDGGRVVIEVSDNGPGVPERARGNLFTAFQASARSGGTGLGLPVTA
                     ELVRLHGGTITLADTAAGAHFRIVIPDRA"
     gene            complement(1890..>2435)
                     /locus_tag="VHN20_03845"
     CDS             complement(1890..>2435)
                     /locus_tag="VHN20_03845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoamide dehydrogenase"
                     /protein_id="HEX2724935.1"
                     /translation="TNKRVYAIGDCAGGEPGALRFTHVANYHAGIVIRRALFRLPARV
                     DNTIVPRVTFADPELASVGLSEEEARANHRAIRILRWPLSENDRAQAERATDGHLKAI
                     VTPRGRILGCAIAAPHAGDLIVPWALALSKGLKVQDLAGIVFPYPTLSEVTKRAAVEF
                     VRPAAQSPWLRRVIAAVRKLG"
BASE COUNT          374 a          810 c          911 g          340 t
ORIGIN      
        1 ggggcgcatg ccggatcttc agcaagaccc gtcagcacgg ctgccacagc cgtttccacg
       61 cggtctcttt cgtccacgcc cgttcgagcg ccaaaagacg tggaaggcca gtggaaaatg
      121 gcgcgcccga aaggattcga acctctgacc cccagattcg tagtctggtg ctctatccag
      181 ctgagctacg ggcgcgaacg gcgtgaagcg gcaaagccgc gggccggagc gggtgatcta
      241 aagggtcggg gatgggtttg caaccctccc gcggagatgg gcagtcgcta cggcagtcgg
      301 caatgggcag tcggcagtcg ttcgccggcg agactgcgaa tgccagccca gggcgtgcca
      361 ctgtcttccg ccgtccacgc tcactgccct actgccgatt gccgactgcc gactgcccgt
      421 tggcgactgc cgaccgcccg tcacgcccgg tcggggatga cgatgcggaa atgggcgccg
      481 gcggcggtgt cggcgagcgt gatggtgccg ccatgcaggc gcacgagctc ggccgtcacc
      541 ggcaggccga ggccggtgcc gccggagcgc gccgaggcct ggaaggcggt gaacaggttt
      601 ccgcgcgcac gctcgggcac gccggggccg ttgtcggaca cctcgatcac caccctgccg
      661 ccgtcgcggc gcgcgctgag gccgacgcgc ggcgggccgt cgcccgtgcc ggcctggctg
      721 agggcctgca cggcgttgcg cacgaggttg gcgaggatgc gcgcgagctg ctcgggatcg
      781 gcgtcgatct cgagggtttc gggcacgtcg gccgtaaagg cgatgccggc gccgggcgcc
      841 agcccggtca ggtcctcgag gtcggcgacg atcggggcca gcggcatgcg ccggcgctgc
      901 ggcaggcgct cgctggcgcg gccataggcg agcgtcgcct cgcagaaatc gatggcgcgc
      961 ccgagcgtgc gcacgagccg cggcgcgacg cgctgcaccg ccgggtcgtc gacgtccttg
     1021 atgcggtcgc cgagcagctg cgcggtcgtc agcatgttgc gcagctcgtg attgatcttg
     1081 ctgacggcga ggccgagatc ggcgagccgc cgcttctggc gcaactcgct cgacagcacg
     1141 ccctccatgc gcgccaccgc ctgctcggcg aggccgatct cgtcgccgcg ctcggagggg
     1201 gccagcacgc gcgaggcgtt ctccgggtcg gtcgtgaagg cggcgatgtt gcccgacagg
     1261 cgccgcaccg ggcgcacgat cagccagtgc agcgagagat agacgagccc ggcggtgatc
     1321 gccgagatca ccagcgacag catgaggatg ttgcgcgaga aggcgaccat ggcggcgcgc
     1381 aggggtttct cggtcagcac cacctcgacg aaatcggcgc ccatggccgg gccgatcacg
     1441 cggatcgggc gctcggccgg aaagaacagg gtgacgaagg cgccgcggat caggtcgcgc
     1501 caggtggcgc tgcgcaggtc gatgacgcgg tcgacctcgg gcggcacgtc gtattccttg
     1561 gcgagcagcc ggcgcatgcc gccgccgccg acggcgatgg cctgggcacc gacgccatcg
     1621 agcaggcgcg tctcgagctc ctcggtgatc ttgtcctcgg gcgccgcgtc gagagccagc
     1681 gcggcgatct gcgcggccgc gaccctgtcc tgcagccagt tgcgccggaa attggcgacc
     1741 gagggcacgt agatcaggac ctcggcgacc atcacgaaca ggatggtcag catcaggagc
     1801 cgcgatgaca gcccgaagat gccggacagg cggcgcccgg cggcgtgcag atgaggcaga
     1861 tgcgggggat gcacgttcat gcgcatccct caccctagct tacgcaccgc ggcaatgacg
     1921 cggcgcagcc aggggctctg ggcggcgggc ctgacgaact cgacggcggc gcgcttggtc
     1981 acctccgaca aggtcggata cggaaagacg atgccggcga ggtcctgcac cttaaggcct
     2041 ttgctcaggg cgagcgccca cggcacgatc agatcgcccg catgtggcgc cgcgatggcg
     2101 cagccgagaa tccggccgcg cggcgtcacg atcgccttga ggtggccgtc ggtggcgcgc
     2161 tcggcctggg cccggtcgtt ctcggacagc ggccagcgca ggatgcggat ggcgcgatgg
     2221 tttgcgcgcg cctcctcttc gctgaggccg accgaggcga gctcggggtc ggcgaaggtg
     2281 acgcgcggca cgatcgtgtt gtcgacgcgc gccggaaggc gaaacagcgc gcgccggatg
     2341 acgatgccgg catggtagtt ggccacatgg gtgaagcgca gcgcccccgg ctcgccgccg
     2401 gcgcagtcgc cgatcgcgta aacgcgcttg ttggt
//
LOCUS       DATAIQ010000225         4375 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_380418, whole genome shotgun sequence.
ACCESSION   DATAIQ010000225 DATAIQ010000000
VERSION     DATAIQ010000225.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4375)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4375)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4375
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_380418"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..195
                     /locus_tag="VHN20_03850"
     CDS             <1..195
                     /locus_tag="VHN20_03850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724936.1"
                     /translation="DTAHSVSRAAFTARVLTGLIARHGVLVGLSDDEIERYCAEAYRR
                     KPCGQVNVLADGPERPNTRR"
     gene            complement(225..1244)
                     /locus_tag="VHN20_03855"
     CDS             complement(225..1244)
                     /locus_tag="VHN20_03855"
                     /inference="COORDINATES: protein motif:HMM:NF024884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase dimerization/phosphoacceptor
                     domain -containing protein"
                     /protein_id="HEX2724937.1"
                     /translation="MADISAHEKRLLSNWHLPAWRRSRLIGYGFGLAAFLASFILRWA
                     LDPYLPPGLPFVTFFMAVTLTAFVAGLGPGIFVTVLTTVAAWNVFLPPAFSFALDRQG
                     ASALVLYVGMSAVNLAVIHLMQVALERLDRERARSAELAGQRELLFTELQHRVANNLQ
                     IVSALITVQKASMSDEAARRALSEAAHRLVLIANLNRKLHDPANAGIDLKDFLRGLCE
                     DVSKAAGIDNPGCNVHGPEGIPLPADKAVPLALIVAELLNNSIEHGFADGKAGTLQMN
                     LERAGDAVVLTVRDDGRGLPPGFDLAQAKSLGLRIVQGLVQQIGARLEMFSDQGTSCR
                     LTFAP"
     gene            complement(1519..2073)
                     /locus_tag="VHN20_03860"
     CDS             complement(1519..2073)
                     /locus_tag="VHN20_03860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003597653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX2724938.1"
                     /translation="MRTSDCDILIVPGYTNSGPNHWQSRWQQRLSSARRVEQDDWEKP
                     EREAWVSRLVSAVEGCRRPVVLVAHSLGVAAVAHAAPQFSRAVVRGAFLVALPDVENV
                     EARPVGVDPSFAPLPRDPLPFPSLLVASRSDPYCPFERAEDFAFAWGSALLDAGEAGH
                     LNVASGYGPWPEGLMRFAGFLRRL"
     gene            complement(2156..2632)
                     /gene="folK"
                     /locus_tag="VHN20_03865"
     CDS             complement(2156..2632)
                     /gene="folK"
                     /locus_tag="VHN20_03865"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009209009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003848 -
                     2-amino-4-hydroxy-6-hydroxymethyldihydropteridine
                     diphosphokinase activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HEX2724939.1"
                     /translation="MPDVLLGLGGNVGAPVTTINAALKRLEAGGVHITARSHWYRTAP
                     WGVTEQPDFINLCAAAETALEPRALLALIHETEAALGRERRERWGPRPIDIDILTYGD
                     ETIDERGLHVPHPHLTERAFVVIPLLDIAPDKLVAGRRVRDWAALHPAGGIARMEV"
     gene            complement(2625..2993)
                     /gene="folB"
                     /locus_tag="VHN20_03870"
     CDS             complement(2625..2993)
                     /gene="folB"
                     /locus_tag="VHN20_03870"
                     /EC_number="4.1.2.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015950688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004150 - dihydroneopterin aldolase
                     activity [Evidence IEA];
                     GO_process: GO:0006760 - folic acid-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="HEX2724940.1"
                     /translation="MSDRVVLKDLQVFARHGVRPEEKKLGQRFAVDVTAFMDLRPAGE
                     SDDYGRTVCYDALTRTVIDTLTAQRFYLIEAAAEAVAQTLLTTFPLIDRVMVEVRKPA
                     AAIDAVFEHVGVVIERARRA"
     gene            complement(2990..3790)
                     /gene="folP"
                     /locus_tag="VHN20_03875"
     CDS             complement(2990..3790)
                     /gene="folP"
                     /locus_tag="VHN20_03875"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018043610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004156 - dihydropteroate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HEX2724941.1"
                     /translation="MGERTLVMGVVNVTPDSFSDGGLNLTPSDAVASALRMAAEGADL
                     VDLGGESTRPGHVTVPAEEEWNRLRPVFAGLAQAAAPLPPLAIDSWKADVARRAIVAG
                     ASIVNDVWGFQRDPAIAEVAAESGAAAILMHNREAADPQIDIVSDILRFLERSLAIAK
                     AAGVPDDRILLDPGIGFGKTIAQSYEAVAALPRLKALGFPVLLGLSRKAFIGRLFEPQ
                     PAPAARLPGTIAANTYGVIAGADIIRVHDVAEHVQAMRVLDTLRRTAA"
     gene            complement(4019..>4375)
                     /locus_tag="VHN20_03880"
     CDS             complement(4019..>4375)
                     /locus_tag="VHN20_03880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018261488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2267 domain-containing protein"
                     /protein_id="HEX2724942.1"
                     /translation="KATGLDATTAQKAIGIILAFLKKEGPPAEVNQLLAAMPGAEQVV
                     AQSGDGGPGATGGGLMAMMGGGVMALGGQLMGAGVSMGQMQPLGRELFAYGREKAGED
                     VMGPIVGAIPGLSQFV"
BASE COUNT          734 a         1457 c         1524 g          660 t
ORIGIN      
        1 gacacagctc actctgtaag ccgcgccgcc tttacagcgc gcgtcttgac ggggctgatc
       61 gcgcgccacg gcgtgcttgt cgggctgagc gacgacgaaa tcgagcgcta ctgcgcggag
      121 gcctaccgga ggaagccatg cggtcaagtc aatgtgctgg ccgacgggcc tgagcgtcca
      181 aacacgcgca gatgacccgc ccttcggtca tcgcttcgat ttgatcacgg cgcaaaggtc
      241 aggcggcaac tcgtgccctg gtcgctgaac atctccagcc tcgcgccgat ctgctggacg
      301 aggccttgaa cgatgcgcag gccgaggctc ttcgcctgcg ccaggtcgaa gcccggcggc
      361 aggccgcggc cgtcgtcacg gaccgtcagc accacggcgt cgccggcgcg ctcgaggttc
      421 atctgcagcg tgcccgcctt gccatcggcg aagccgtgct cgatcgagtt gttgaggagc
      481 tcggcgacga tcagggcgag cggcacggcc ttgtcggccg gcagcggaat gccctcgggc
      541 ccgtgcacgt tgcagcctgg gttgtcgatg cccgcagcct tggacacgtc ctcgcaaagc
      601 ccgcgcagaa aatccttgag gtcgatgcct gcgttcgccg gatcgtggag ctttcggttg
      661 aggttcgcga tcagaaccag gcgatgggcc gcctcgctga gcgcacgacg ggccgcctcg
      721 tcgctcatgg acgccttctg gacggtgatc agcgccgaga cgatctgcag gttgttggcg
      781 acgcggtgct gcagctcggt gaagagaagc tcccgctggc cggcgagctc ggcactgcgg
      841 gcgcgctcgc ggtcgagacg ctcgagcgcg acctgcatca ggtggatcac ggcaaggttg
      901 accgcgctca tgccgacata gaggacgagg gccgatgcgc cctggcgatc gagtgcgaag
      961 gagaacgcgg gcgggagaaa gacattccag gcagccacgg tggtcaggac ggtcacgaaa
     1021 atcccgggcc cgaggccggc cacgaaggcc gtcagggtca cggccatgaa gaaggtgacg
     1081 aacggcaggc ctggcggaag atacgggtcg agggcccagc gcaggatgaa cgaggcgagg
     1141 aacgcggcga ggccgaaccc gtaaccgatc agacgggacc gccgccatgc cggcagatgc
     1201 cagttagaca acagtcgttt ttcatgtgcg gagatatccg ccatgcgctg ttcacctcgg
     1261 gaatttcgac ggggggacgc aacctcgact gcttgataac ggccaagccc cgggcgcagg
     1321 ttccatcttt tggtctcggc agccgtttcc acccacgcgt tagccgcgcc gacgccttcc
     1381 ggagcgggat cgcctcagaa ttgaatcgat atctccgacc gtttgagccg gatgatcttt
     1441 ttgagcgaag ccgcgtccgc atcgtcgtgc ccccagcgca cgttttgcgt cgaacggcaa
     1501 ccgcttcgcg gcaaatgctc aaagccgcct gaggaagccc gcaaagcgca tcagcccttc
     1561 gggccagggg ccgtagccgc tcgcgacgtt gaggtgtccc gcctcgcccg catcgagcag
     1621 cgccgaaccc caggcgaagg cgaagtcctc ggcgcgctcg aacgggcaat aggggtccga
     1681 tcggctggcc acgagaaggg agggaaaggg gaggggatcg cgcggcaggg gcgcgaagga
     1741 cggatcgacc cccactggcc gcgcctccac attctcgacg tccggcagcg ccacgaggaa
     1801 ggcgccgcgg acgaccgcgc gcgaaaactg cggcgccgcg tgcgccactg cggcgacccc
     1861 gaggctatgc gcgacgagga ccacgggccg ccggcagccc tcgacggcgc tgaccaggcg
     1921 cgacacccag gcctcgcgct ccggcttttc ccagtcgtcc tgttccacgc ggcgggcgct
     1981 ggacaagcgc tgctgccagc ggctctgcca atggttgggc ccggaattgg tgtagccggg
     2041 cacgatcagg atgtcgcaat cggatgttcg catgatgcaa tgtggcggat cgagctcttc
     2101 gcgcgggatc aatgggtctc acgggcgccg cgttacaatg cttcgggccg tcccgctaca
     2161 cttccatgcg cgcgatgccg ccggccgggt gcagcgcggc ccaatctcgc acgcggcgcc
     2221 cggcgacgag cttgtcgggt gcgatatcga ggagggggat caccacgaaa gcacgttcgg
     2281 tgagatgcgg atggggaacg tgcaatccgc gctcgtcgat cgtctcgtcg ccgtaggtca
     2341 ggatatcgat gtcgatcggg cgcgggcccc agcgctcgcg ccgctcgcgg ccaagggcag
     2401 cctcggtctc gtggatcagc gcgaggagcg cgcgtggctc aagcgcggtc tcggcggcgg
     2461 cgcagagatt gatgaaatcc ggctgctcgg tgacgcccca cggcgccgtc cgataccagt
     2521 gcgagcgcgc cgtgatgtgc acgccgccgg cttcgagacg cttgagcgcg gcgttgatcg
     2581 tcgtcaccgg ggcgccgaca ttgccgccca atccgagtag gacgtcaggc acggcgggcg
     2641 cgctcgatga cgacgccgac atgctcgaac acggcgtcga tcgcggcggc aggcttgcgc
     2701 acctccacca tgacgcggtc gatcaatgga aacgtcgtca acagggtctg cgcaaccgct
     2761 tcggccgccg cctcgataag atagaagcgc tgcgcggtga gggtgtcgat cacggtgcgc
     2821 gtcagcgcgt cgtagcagac cgtgcggcca taatcgtcgc tctcgccggc ggggcgcagg
     2881 tccatgaacg ccgtcacgtc gacggcgaaa cgctgaccga gtttcttctc ctcgggccgc
     2941 acgccgtgac gggcgaagac ctgcagatcc ttgagcacga cgcggtcgct catgcggcgg
     3001 tcctcctgag cgtgtcgagg acgcgcatcg cctgcacgtg ttccgccacg tcgtgaacgc
     3061 ggatgatgtc cgccccggcg atgaccccgt aggtgttcgc ggcaatcgtc ccgggcaggc
     3121 gcgcggccgg tgccggctgc ggctcgaaga ggcggccgat gaaggctttc cgcgaaaggc
     3181 cgagaaggac cggaaaaccg agcgccttga ggcgcggcag cgcggcaacg gcctcatagc
     3241 tttgcgcgat ggtcttgccg aaaccgatgc ccggatcgag gaggatgcgg tcgtcgggca
     3301 cgcccgccgc cttcgcgatc gcgagcgagc gctcgaggaa acgcaggatg tcggacacga
     3361 tgtcgatctg tgggtcggcc gcctcgcggt tgtgcatcag gatcgcggcc gcaccgctct
     3421 cggccgcgac ctcggcgatc gcgggatcgc gctgaaagcc ccagacgtcg ttgacgatcg
     3481 aggcgccggc cacgatggcg cgacgcgcga catcggcctt ccagctgtcg atggcgagcg
     3541 ggggaagcgg cgcggcggct tgcgcgagcc ccgcgaagac cggccgcagc cggttccatt
     3601 cctcctccgc cggcacggtg acgtggcccg gacgggtgga ttcgccaccg agatcgacca
     3661 ggtcggcgcc ctccgccgcc atgcgcaggg ccgacgcgac cgcatcgctg ggagtcaggt
     3721 tgaggccgcc atcggagaat gaatcaggcg tgacgttgac cacgcccatg accagcgtgc
     3781 gctcccccaa tgcgagcgtc ccggtccgat gggagagaat gcgtcctgtc ggcatgcaag
     3841 cggcatggcc gcccggcccg gcgctgtcaa tgctgggctc ataaagaggg cccggctcgg
     3901 tgagccgggc cctccgtccc gcccccacaa gccatgaaga cgggaaccga tccatgcgtc
     3961 ggatcgccaa gacaacgcgc cagcggcgca gcggtttcag cttggccgtg cgcggcgatc
     4021 aaacgaactg gctgaggccg gggatcgcgc ccacgatcgg gcccatcacg tcctcgccgg
     4081 ccttctcgcg gccataggcg aacaattcgc ggccgagcgg ctgcatttgc cccatcgaca
     4141 cgcctgcgcc catgagctgc ccgccgaggg ccatgacgcc gccgcccatc atggccatca
     4201 agccgccgcc ggtcgcgccg gggccgccgt cgcccgattg cgcgaccacc tgctcggcac
     4261 ctggcatggc ggcgagaagc tggttcacct ccgccggcgg gccctccttt ttcaggaacg
     4321 ccaggatgat gccgatggcc ttctgcgcag tcgtggcgtc gagcccggtg gcttt
//
LOCUS       DATAIQ010000226         2699 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_189682, whole genome shotgun sequence.
ACCESSION   DATAIQ010000226 DATAIQ010000000
VERSION     DATAIQ010000226.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2699)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2699)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2699
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_189682"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..416
                     /locus_tag="VHN20_03885"
     CDS             <1..416
                     /locus_tag="VHN20_03885"
                     /inference="COORDINATES: protein motif:HMM:NF019998.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="TOBE domain-containing protein"
                     /protein_id="HEX2724943.1"
                     /translation="VGTPEQLFGSPDHLDVAEFMGFRNQLRGKVASVNGDVAVVDVGA
                     TRISGRMREPVKAGDAAVVAIRPDNLMPVPTTNGGVPATLSASEFRGQEFVGFARTAD
                     GVDLSFRSPIRLHAGGAVHLRADPTRVLVFAGAGP"
     gene            431..1312
                     /locus_tag="VHN20_03890"
     CDS             431..1312
                     /locus_tag="VHN20_03890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018114718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEX2724944.1"
                     /translation="MGGRLSLAQRLAARGLDSVTLLVLPAVLFVIGLFIYPFLYGFWL
                     SFQPKTGTALANYTRFFSDSFLYGTIATTLWLALPVTLLNLALAVPIAFRVRLMRRQR
                     LLTTILVIPITLGTVLVAEGLLNYLGPQGWFNRTLLTLGLISQPLKLVHNYWGVFLSL
                     LITGFPFTFLLTLSYVTGIDPALENAAATLGAGPRERFRHIFWPLLLPGLAITFCLSF
                     VQAFSVFPSAVLLGAPAGPTRVISIAAYTAAFEEYDYAMASAIAMIMGFVQLAIVIAV
                     LASRSLFYRGPTGGGKG"
     gene            1316..2158
                     /locus_tag="VHN20_03895"
     CDS             1316..2158
                     /locus_tag="VHN20_03895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006121514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX2724945.1"
                     /translation="MMQRVTVGTKLWATAVWVLVGFFVLNLFGMIAAVVTSSFATRWL
                     GTWLPAGWTTRWYTAAWSEFQLDDILIVTFQMAFLVVLFSALLGVPAAYALARRDFPG
                     KRLVMLLFLLPLLVPPITFGIPLATVLYRAGLAGSMSGVVIANLVPTVPFVILVMIPF
                     IEQIDPRIEAAARVFGAGTLRLFLHVLLPLLLPGVLAALLLVLVRTLAMFELTFLTAG
                     PTSQTLVVALYYAVFAAGVRAVQSIDAMAVIYMVTTLVWLLLALRFVNPTQIVARAKQ
                     EPAH"
     gene            complement(2191..2541)
                     /locus_tag="VHN20_03900"
     CDS             complement(2191..2541)
                     /locus_tag="VHN20_03900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724946.1"
                     /translation="MDQLQSRTLPRLVQDAIHCLWLAHDHVDPALKSEARVMIMSLRK
                     ADAADAATARCVLHELAAHLLRLEERLDAMERPCTARSVRRVRDRVAHLAGGAPPSQA
                     MDAKANLLQMIDHR"
BASE COUNT          327 a          981 c          870 g          521 t
ORIGIN      
        1 aggtcggcac gcccgagcag ctgttcggca gcccggacca tctcgacgtc gccgagttca
       61 tgggctttcg caaccagctg cgcggcaagg tcgcgtccgt caacggcgac gtcgccgtcg
      121 tcgacgtcgg cgcgacgcgc atctcgggcc gcatgcgcga gccggtcaag gccggcgacg
      181 cggccgtcgt cgcgatcagg cccgacaatc tcatgccggt gccgaccacc aacggcggcg
      241 tgcccgcgac gctgagcgcg agcgagttcc gcggccagga attcgtcggc tttgcgcgca
      301 cggcggatgg cgtggatctg tcgttccgat cgccgatccg cctgcatgcc ggtggcgccg
      361 tgcacctgcg cgccgatccg acccgcgtgc tcgtgttcgc gggagcgggc ccgtgaccgc
      421 cttcgtcgcg gtgggcggcc ggctgtcgct ggcgcagcgg ctcgccgcgc gcggcctcga
      481 ctcggtcacc ctgctcgtgc tgccggccgt cctgttcgtg atcgggctct tcatctaccc
      541 gttcctgtac ggcttctggc tgtcgttcca gccgaagacc gggaccgcgc tcgccaatta
      601 cacgcgcttc ttctccgact cgttcctcta cggcaccatc gccacgacgc tgtggctggc
      661 gcttccggtg acgctgctca acctcgcgct cgccgtgccg atcgcgttcc gcgtgcggct
      721 catgcgccga cagcgcctcc tgacgaccat cctggtgatc ccgatcacgc tcggcaccgt
      781 gctggtggcg gaaggcctcc tcaactatct cggcccgcaa ggctggttca accgcacgct
      841 gctcacgctc gggctgatct cgcagccgct caagctcgtg cacaattact ggggcgtctt
      901 cctctcgctg ctcatcaccg gctttccctt cacgttcctg ctgacgctgt cctacgtcac
      961 cggcatcgac ccggcgctcg agaatgcggc ggcgacgctc ggcgcggggc cgcgcgagcg
     1021 cttccgccac atcttctggc cgctgctgct gccgggcctc gccatcacct tctgcctgtc
     1081 cttcgtgcag gccttttcgg tcttcccctc ggccgtgctg ctcggcgccc cggccgggcc
     1141 gacgcgcgtc atctcgatcg ccgcctacac cgccgccttc gaggaatacg actacgcgat
     1201 ggcctcggcg atcgccatga tcatgggctt cgtccagctt gccatcgtca tcgccgtgct
     1261 cgcctcgcgc agcttgttct accgcggccc caccgggggc gggaaaggct agaacatgat
     1321 gcagcgcgtg accgtcggga cgaaactctg ggccacggcc gtgtgggtcc tggtcggctt
     1381 cttcgtcctc aacctgttcg gcatgatcgc ggccgtcgtg acgagctcgt tcgcgacgcg
     1441 ctggctcggc acctggctgc cggccggatg gaccacgcgc tggtacacgg cggcgtggag
     1501 cgagttccag ctcgacgaca tcctcatcgt caccttccag atggcgttcc tggtcgtgct
     1561 gttctcggcg ctgctcggcg tgcccgcggc ctacgcgctg gcgcggcgcg actttcccgg
     1621 caagcggctc gtcatgctgc tgttcctgct gccgctgctg gtgccgccga tcaccttcgg
     1681 catcccgctc gcgaccgtgc tctaccgcgc cggcctcgcc ggcagcatgt cgggcgtcgt
     1741 catcgccaac ctcgtgccga ccgtgccgtt cgtgatcctc gtgatgatcc cgttcatcga
     1801 gcagatcgac ccgcgcatcg aggccgccgc gcgcgtgttc ggcgccggca ccttgcgcct
     1861 gtttctccac gtgctgctgc cgctgctcct gcccggcgtg ctggcggcgc tgctgctcgt
     1921 gctggtgcgc acgctcgcca tgttcgagct caccttcctg accgccgggc cgaccagcca
     1981 gacgctcgtc gtggcgctct attacgccgt cttcgccgcc ggcgtgcgcg ccgtgcagtc
     2041 gatcgacgcc atggccgtga tctacatggt gacgacgctc gtgtggctgc tgctcgcgct
     2101 gcgtttcgtc aatccgaccc agattgtggc ccgcgccaag caggagccgg cgcattaggg
     2161 cgcgactttt gatgggtagc ggctgcgccg ctacctgtga tcgatcatct gaagcaagtt
     2221 cgccttagcg tccattgcct gcgaaggcgg cgcgccgcca gcgagatgcg cgacgcggtc
     2281 gcgcacgcgc cgcacgctcc tggccgtgca cgggcgctcc atggcgtcga ggcgctcctc
     2341 gaggcgcagg aggtgcgccg cgagctcgtg cagcacgcac cgggcggtcg ccgcgtccgc
     2401 cgcgtcggcc ttgcgcaagg acatgatcat gacccgcgcc tcgctcttga gggcggggtc
     2461 gacgtggtcg tgcgcgagcc acaggcaatg gatcgcgtcc tgcacgagac ggggcagcgt
     2521 gcgtgactgc agctggtcca cccggatctc ccggttctgc gaaaattgga cgatgaggtt
     2581 agccaggctc ccttgaatca tcgctttcca gagcggctgc aattgccggc aatttttcgc
     2641 gacaatttga gcctgtcgtc ggcgaacgcg tggtttcgcc acgatgcccg gaggtcgct
//
LOCUS       DATAIQ010000227         4001 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_103795, whole genome shotgun sequence.
ACCESSION   DATAIQ010000227 DATAIQ010000000
VERSION     DATAIQ010000227.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4001)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4001)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4001
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_103795"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1582
                     /locus_tag="VHN20_03905"
     CDS             <1..1582
                     /locus_tag="VHN20_03905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015931608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="helicase-related protein"
                     /protein_id="HEX2724947.1"
                     /translation="LEDRAWRICFFGDEIESIQEFDPLTGQKTGDLKSVKIYANSHYV
                     TPKPTLQQAVKGIKEELKWRVQELSRMGRLLEAQRLEQRTVFDLEMIEATGSCSGIEN
                     YSRYLTGRKPGEPPPTLFEYLPDNALVFADESHVTIPQIGAMYRGDFRRKATLAEYGF
                     RLPSCMDNRPLRFEEWDAMRPQSVHVSATPGGWEMDRTEGVFVEQVIRPTGLVDPPVE
                     IRPARSQVDDLLGEVKEVAQRGYRSLVTVLTKRMAEDLTEYLHENSVRVRYMHSDIDT
                     IERIEIIRDLRLGAFDVLVGINLLREGLDIPECALVAILDADKEGFLRSETSLVQTIG
                     RAARNVEGKVILYADQMTGSMQRAIAETDRRREKQLAYNAEHGITPESVKKNIADILD
                     SVYERDHVRVDAGFAETAATVGHNLKAVMADLEKRMREAAADLNFEEAARLRDELKRL
                     QATELAVADDPMVTQTHVEHAAGRSAAARPYGAGANTPSRVRKPTLDEMGPHNREIPL
                     PRSTQGFGGQRPKSRRGR"
     gene            complement(2432..2899)
                     /locus_tag="VHN20_03910"
     CDS             complement(2432..2899)
                     /locus_tag="VHN20_03910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010969620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HEX2724948.1"
                     /translation="MRAITPAPVRKSIFVRAQQQRAFEVFTSGIGRWWPPSHHIGKAE
                     MQDAIIEPRAGGRWYERGVDGSECEWGRVLAWDPPQRVVLAWQLTADWQFDPKLVTEV
                     EVRFTPEGEGTRVDLEHRNLERFGERADTVRGQIDAEGGWGLILQNFADAATA"
     gene            complement(2920..3228)
                     /locus_tag="VHN20_03915"
     CDS             complement(2920..3228)
                     /locus_tag="VHN20_03915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011583368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HEX2724949.1"
                     /translation="MANISMTLAALADPTRRTVFERLARQPHSVGELARGLPVSRPAV
                     SQHLKVLKAAGLVTDRAEGTRRVYHIDPAGLGAIRAWLDQFWTDALDAFQREVERDNH
                     "
     gene            complement(3332..3928)
                     /locus_tag="VHN20_03920"
     CDS             complement(3332..3928)
                     /locus_tag="VHN20_03920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724950.1"
                     /translation="MRLEAVCAAACLAAVPAFAQAPARDETRFTELVGGRCRFVSDDR
                     QTGEDALKRCPGHGDVELETFSSHTRVSLSFRFSRTQRVPDVVTGWSLGKTVEWRGVR
                     SKKGFQPYAAIVRVLMKDPEAATPRPDGDVLAVLRVDPSEAEACPIAYVDGRANKRAN
                     ELARDTADRLGPTYLCDSDKPVVTGVRTRWTDALLRRE"
BASE COUNT          682 a         1388 c         1335 g          596 t
ORIGIN      
        1 tctggaggac cgcgcctggc gcatctgctt cttcggcgac gagatcgaat ccatccagga
       61 attcgatccg ctcaccggcc agaagaccgg cgacctgaag agcgtgaaga tctacgccaa
      121 ctcccattac gtcacgccga agccgacgct gcagcaggcc gtcaagggca tcaaggaaga
      181 gctcaagtgg cgcgtgcagg agctgagccg catgggccgg ctgctcgagg cgcagcggct
      241 cgagcagcgc acggtcttcg acctcgagat gatcgaggcg accggctcgt gcagcggcat
      301 cgagaactat tcgcgctacc tgaccggccg caagcccggc gagccgccgc ccaccttgtt
      361 cgaatatctg cccgacaacg cactcgtctt cgccgacgaa agccacgtca ccatcccgca
      421 gatcggcgcc atgtaccgcg gcgacttccg gcgcaaggcg acgctggccg aatacggctt
      481 ccgcctgccc tcgtgcatgg acaaccgccc cttgcgcttc gaggaatggg acgcgatgcg
      541 gccgcaatcg gtgcacgtct cggcgacccc cgggggctgg gagatggacc gcacggaggg
      601 cgtgttcgtc gagcaggtca tccgcccgac cgggctcgtc gatccgccgg tcgagatccg
      661 gccggcgcgt tcgcaggtcg acgacctgct cggcgaggtc aaggaggtgg cgcagcgcgg
      721 ctaccgctcg ctggtgacgg tgctgaccaa gcgcatggcc gaggatctga ccgaatacct
      781 gcacgagaac agcgtgcgcg tgcgctacat gcattccgac attgacacca tcgagcgcat
      841 cgagatcatc cgcgatctgc ggctcggcgc gttcgacgtg ctggtcggca tcaacctgtt
      901 gcgcgagggc ctcgacattc ccgaatgcgc gctcgtggcc atcctcgatg ccgacaagga
      961 aggcttcttg cgcagcgaga cctcgctcgt gcagaccatc ggccgcgccg cgcgcaacgt
     1021 cgaaggcaag gtcatcctct acgccgacca gatgaccggc tcgatgcagc gcgccatcgc
     1081 tgagaccgac cgccgccgcg aaaagcagct cgcctacaac gccgagcacg gcataacgcc
     1141 ggagagcgtc aagaagaaca tcgccgacat cctcgacagc gtctacgagc gcgaccacgt
     1201 gcgcgtcgat gccggcttcg ccgagaccgc cgccaccgtc ggtcacaacc tcaaggccgt
     1261 catggcggac ctcgagaaac gcatgcgcga ggccgccgcc gacctcaatt tcgaggaagc
     1321 agcgcgcctg cgcgacgagc tcaagcgcct gcaggcgacc gagctcgccg tcgccgacga
     1381 tcccatggtc acgcagacgc atgtcgagca cgccgctggc cgttccgccg cggcgcggcc
     1441 ttacggcgcc ggcgccaaca cgccctcgcg cgtgcgcaag ccgacgctcg acgagatggg
     1501 tccgcacaac cgcgagatcc ccctgccccg ctcgacgcaa gggtttggcg gccagcggcc
     1561 gaagagtcgc cgcggccgct gacgcccctt ccgcgaccgc gaccacgacc tctcccgcga
     1621 agcgggagag gtcgagttgc ggcgccggcg tgtcggaacg aacgtcgctc atggtgaggt
     1681 gcgaggagcg ccagcaacga cctcgaagca cccacggcga gctggagcat gcttcgagga
     1741 tcaggcctga ctgcctgaga cctcaggctg acgtggagtt ggaacaggga accgaggtga
     1801 accggaccat ccggccggcg tttcacctga gcatcacgga agccggagac gatggatggc
     1861 gttgagagat caactgcgcg agcacttcgg acggggcagc gtggccggtt tcgtgctgat
     1921 cctgctcgcg gccgtgctcg tgctcttcct catcttctgg cccgtcgcgt agcggcggag
     1981 cgaccagcgc gcaggccttc gtcgcgacgg accgaaggcc cccggtcgac gaacgcggtg
     2041 cccggtccgg ccgacatgga ggatcagcat tctgaccagt gcggcagcga agctgagcag
     2101 gcggttcatg gcggcattcc ctgcaagcgg cgccagcatg cggtcggacc gctgccgcgg
     2161 ccgctctctc gtcaggcgcg cgtgcgcacc gacttgacga tgcgcttgcc gtgcggcgtc
     2221 tcggcgatct cgaaggtgac gcgttcgccg gtgcgtggat cgaggacaac gaggaccatg
     2281 acaaactccc ctggttgctt gcagtgtgcc tgaagcatca gggaaggctg tgcgaaaacg
     2341 cacacaccat gaacgactta ggccatccgc cgcaacgcct ggcccaggct gcgctcccgg
     2401 cctgctgcga agaacgggca cgcacgcccc gctacgcggt cgccgcgtcc gcgaagttct
     2461 gcaggatcag gccccagccg ccttcggcat cgatctggcc gcgcacggtg tcggcccgct
     2521 cgccgaaacg ctcgaggttg cggtgctcga ggtcgacgcg cgtcccctcg ccttccggcg
     2581 tgaagcgcac ctcgacttcg gtgacgagct tcggatcgaa ttgccagtcg gcggtcaatt
     2641 gccaggcgag cacgacgcgc tgcggcggat cccacgcgag gacgcggccc cactcgcatt
     2701 cgctaccgtc gacgccgcgc tcgtaccagc gcccgccggc gcgcggctcg atgatcgcgt
     2761 cctgcatctc ggccttgccg atatgatgcg agggcggcca ccagcggccg atgccggacg
     2821 tgaacacctc gaacgcccgt tgctgctgtg ctctcacgaa aatgctcttg cgcacgggcg
     2881 cgggcgtgat ggcgcgcatg tctctctccc ctgatgcctt cagtgattgt cgcgttcgac
     2941 ttcgcgctgg aacgcgtcga gcgcgtcggt ccagaactgg tcgagccagg cgcggatggc
     3001 gccgaggccg gccggatcga tgtggtagac gcgccgcgtc ccctcggccc ggtcggtgac
     3061 gaggccggcg gccttgagca ccttgagatg ctgcgacacg gccggccggc tcaccggcag
     3121 gccgcgggcc agctcgccga ccgaatgcgg ctgccgcgcc aggcgctcga acacggtgcg
     3181 ccgcgtcggg tcggcgaggg cagccagcgt catagaaatg ttagccatta cctaccgtaa
     3241 gtaatggctt acgcgatgtc aagcggccag gcgccccact agattctcag caaaatactg
     3301 gacctgaccg gctcgaaagc ggcccgcagg cctactcgcg ccgcagcagc gcgtcggtcc
     3361 agcgcgtccg gacgccggtc accaccggct tgtcgctgtc gcagagatat gtcgggccga
     3421 gccggtcggc ggtgtcgcgc gcgagctcgt tggcgcgctt gttggcgcgc ccgtccacat
     3481 aggcgatcgg gcacgcctcg gcctcgctcg ggtcgacgcg caaaaccgcc agcacgtcgc
     3541 cgtccgggcg cggcgtcgcc gcctcggggt ccttcatcag gacgcgcacg atcgcggcgt
     3601 agggctgaaa gccctttttc gacctgacgc cgcgccattc gacggtcttg ccgaggctcc
     3661 agccggtgac cacgtcaggc acgcgctggg tgcgcgagaa gcggaagctc agcgacacgc
     3721 gcgtgtgact cgagaatgtt tccagctcga cgtcgccatg accggggcag cgcttgagcg
     3781 cgtcctcgcc cgtctgccgg tcgtcactga cgaagcggca gcgcccgccg acgagctccg
     3841 tgaagcgcgt ctcgtcccgc gccggggcct gggcgaatgc cggaacggcg gcgaggcagg
     3901 ccgcggcaca gacagcttca aggcgcatcc gattcactca ccgcttcgtt acgagcgcca
     3961 cgcgaggggc aggagtaacc ttagccgatg acggggaggt t
//
LOCUS       DATAIQ010000228         2805 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_103961, whole genome shotgun sequence.
ACCESSION   DATAIQ010000228 DATAIQ010000000
VERSION     DATAIQ010000228.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2805)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2805)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2805
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_103961"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1305
                     /locus_tag="VHN20_03925"
     CDS             <1..1305
                     /locus_tag="VHN20_03925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724951.1"
                     /translation="VDLPADGWQPRAYQLPVWRYFEKGGKRAVCVWHRRSGKDEFCLH
                     LAAVEAHHRPATYWHMLPEAAQARKAIWDAVNPRSGRRRIDEAFPRALRATTRENEML
                     IRFKNGSTWQVVGSDNFNSLVGAPPAGVVFSEYALADPSAWNFIRPILAENSGWAAFI
                     YTPRGPNHGQDLFRYAKSDPSWFAELLTVDDTGVITPEVLAQEKRELIATQGAHGEAL
                     FRQEYYCSFTAAIIGAYYGREMEAAEAAGRIAANVYDPALAVHTAWDLGLSDHTAIWF
                     FQQSGFDIRLVDYYAASGFGLDHYAKVLQDKRYTYGRHLWPHDGARGELGSGKTLRET
                     AADLGFATTIVRKLPIEDGINAARKILPRCWFDRDTCAEGIKALRQYRRDWDDARKVF
                     YERPLHDWASHPADAFRTLAVGLQEPSAAAKALPRRDLSWVV"
     gene            complement(1378..2082)
                     /locus_tag="VHN20_03930"
     CDS             complement(1378..2082)
                     /locus_tag="VHN20_03930"
                     /EC_number="2.7.7.-"
                     /inference="COORDINATES: protein motif:HMM:NF014409.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acylneuraminate cytidylyltransferase family
                     protein"
                     /protein_id="HEX2724952.1"
                     /translation="MTRIVALITARGGSKRLPRKNVLPAGGKPLIVWTVQAASAARSI
                     ARTLVSTDDDEIAEVCRSAGGEVPFRRPEHLAGDHSSHYDVVAHAIDWLEADEGRLPD
                     YVLLLQPTTPLRTAEDIDGIADLARRTGAESLVGVVPVSHHPMLCHRLGADGTLAPYL
                     PRPEGYLRTQDLEPAYALNGALYLFRPDAFRARRQVLADHPVAYVMPRERSLDVDDAF
                     DLALVDLALKLRQGSA"
     gene            complement(2092..>2805)
                     /locus_tag="VHN20_03935"
     CDS             complement(2092..>2805)
                     /locus_tag="VHN20_03935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007196090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS family aminotransferase"
                     /protein_id="HEX2724953.1"
                     /translation="LPADMDAIVAVARDYGLPVVADAAAALGATYRGRPSGALGADLT
                     MYSFNGNKTVTAGGGGAVVGADEALVRHLRHLTTTARVGSDYDHDMVGYNYRMTNIQA
                     AVGCAQMENLDSFLAAKRRIDDRYRAGLCDLPGVQGFPRPNWADSACWFSGIIFDAIE
                     ADRMAALRARLRDANIDARPFWKPMHRQLPFQDAPRTRQDVSDDVWTRILTLPCSTHL
                     SEADQGYVIDTVRRNLKNL"
BASE COUNT          447 a          943 c         1003 g          412 t
ORIGIN      
        1 gtcgatctgc cggcggacgg ctggcagccg cgcgcctacc agctgccggt gtggcgctac
       61 ttcgaaaagg gcggcaagcg ggccgtgtgc gtgtggcatc gcagatccgg caaggacgag
      121 ttctgcctgc acctcgccgc cgtcgaggcg caccaccggc ccgccaccta ctggcacatg
      181 ctgcccgagg cggcgcaggc gcgaaaggcg atctgggacg ccgtcaatcc gcgtagcggc
      241 aggcggcgca tcgacgaggc gttcccgcgc gccttgcgcg cgacgacgcg cgagaacgag
      301 atgctgatcc gcttcaagaa cggatcgacg tggcaggtgg tcggctcgga caacttcaac
      361 tcgctggtcg gcgcgcctcc ggccggcgtc gtgttctccg aatacgcgct cgccgatccg
      421 agcgcctgga acttcatccg cccgatcctg gccgagaata gcggctgggc ggcgttcatc
      481 tacacgccgc gcgggccgaa ccacggccag gatcttttcc gttacgcgaa gtcggatccc
      541 tcctggttcg ccgagctcct gaccgtcgac gacaccggcg tgatcacgcc ggaggtgctg
      601 gcccaggaga agcgcgagct gatcgccacg caaggcgcgc atggagaggc gctgttccgc
      661 caggaatatt actgctcgtt cacggcggcg atcatcggcg cctattacgg gcgcgagatg
      721 gaggcggcgg aggcggccgg gcggatcgcg gcgaatgtct acgacccggc gctcgcggtg
      781 cacacggcgt gggacctcgg cctgtccgac cacaccgcga tctggttctt ccagcagagc
      841 ggcttcgaca tccgcctggt cgactattac gccgccagcg gcttcggcct cgaccattac
      901 gccaaggtgc tgcaggacaa gcgctacacc tacgggcggc acctgtggcc gcatgacggc
      961 gcccgcggcg agctcggcag cggcaagacg ctgcgcgaga ccgcggcgga cctcggcttc
     1021 gcgacgacta tcgtcaggaa gctgcccatc gaggacggca tcaacgcggc gcgcaagatc
     1081 ctgccgcgat gctggttcga ccgcgacaca tgcgcggaag gcatcaaggc gctgcgccag
     1141 taccggcgcg actgggacga cgcgcgcaag gtcttctacg agcgcccgct tcacgactgg
     1201 gcctcgcatc ccgccgacgc gttccgcacg ctcgccgtcg ggctgcagga gccgagcgcg
     1261 gccgcaaagg cgttgccgcg gcgcgatctc agctgggtcg tgtgatcgcg cctcctcaaa
     1321 cacacctgtt acccatgtgt ccgggctaaa caacaagccc ggccatggcg tccgcaatta
     1381 ggcggagccc tgccgcagct tcagggcgag gtcgacgagg gccagatcga aggcatcgtc
     1441 gacgtcgagc gagcgctcgc gcggcatgac gtaggcgacg gggtgatcgg ccagaacctg
     1501 cctgcgcgcg cggaacgcgt cggggcggaa caggtacaag gcgccgttga gggcgtaggc
     1561 cggctcgaga tcctgggtgc gcagataacc ctccggccgc ggaagatacg gcgcgagcgt
     1621 gccgtcggcg ccgagccgat ggcagagcat cggatgatgg ctgacgggca cgacgccgac
     1681 aaggctctcg gcgccggtgc gccgggcgag atcggcgatg ccgtcgatgt cctcggccgt
     1741 gcgcagcggc gtcgtcggct gcagcagcag aacgtaatcg ggaaggcggc cttcgtccgc
     1801 ttccagccag tcgatcgcgt gcgcgaccac gtcgtaatgc gagctgtggt cgcctgcgag
     1861 atgctcgggc cggcggaacg ggacctcgcc cccggcgctc ctgcagacct cagcgatctc
     1921 gtcgtcgtcg gtcgagacca gggtgcgcgc gatcgaccgc gccgcgcttg ccgcctgcac
     1981 ggtccagacg atcagcggct tgccgccggc cgggagcacg ttcttgcggg gcaggcgttt
     2041 cgagccgccg cgcgcggtga tcagggcgac gatgcgggtc atgcccgacg cctaaaggtt
     2101 cttcagattg cgacggacgg tgtcgatcac gtagccctga tcggcctccg acagatgcgt
     2161 cgagcacggc agcgtgagga tccgcgtcca cacgtcgtcg gagacgtcct ggcgcgtgcg
     2221 cggcgcgtcc tgaaacggca gctgccggtg catcggcttc cagaacggcc gggcatcgat
     2281 gttggcgtcg cgcaagcggg cgcgcaacgc ggccatgcga tcggcctcga tggcgtcgaa
     2341 aatgatgccg gagaaccagc aggcgctgtc ggcccagttc gggcgcggaa atccctggac
     2401 gcccggcagg tcgcacagcc cggcgcggta gcggtcgtcg atgcgccgct tcgccgcgag
     2461 gaagctgtcg agattctcca tctgggcgca gccgaccgcc gcctggatgt tggtcatgcg
     2521 gtagttgtag ccgaccatgt cgtggtcgta gtcgctgccg acccgcgcgg tcgtcgtgag
     2581 atgacgcagg tgcctgacga gcgcctcgtc agcgccgacc accgcgccgc cgccgcccgc
     2641 cgtgaccgtc ttgttgccgt tgaaggaata catcgtgaga tcggcgccga gggcgccgga
     2701 cgggcggccg cgataggtgg cgccgagcgc ggcggcagcg tcggccacca ccggaagccc
     2761 gtagtcgcgg gcgacggcga cgatcgcgtc catgtcggcc ggcag
//
LOCUS       DATAIQ010000229         2295 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_104019, whole genome shotgun sequence.
ACCESSION   DATAIQ010000229 DATAIQ010000000
VERSION     DATAIQ010000229.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2295)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2295)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2295
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_104019"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(18..635)
                     /locus_tag="VHN20_03940"
     CDS             complement(18..635)
                     /locus_tag="VHN20_03940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012589989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="HEX2724954.1"
                     /translation="MGIEGKDRQRELESGAQIISGQLGKTIQRLRKAYNLSLSELSEQ
                     SGVAKSIISQIERNETNPTLATIWRLSQALDISIERVLATADDEPFIEKSSRGDTPIL
                     VSDDGKMRLAIIGWIKTIEWLQWYDVTSEPGGVLDSDPHQRGSVESLSVLEGEFEVEA
                     GGIVQRAKAGESLRYRSDHPHTVRCVSETPGRATMVCILKAAVMD"
     gene            complement(750..1565)
                     /gene="thiD"
                     /locus_tag="VHN20_03945"
     CDS             complement(750..1565)
                     /gene="thiD"
                     /locus_tag="VHN20_03945"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008902 - hydroxymethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0008972 - phosphomethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HEX2724955.1"
                     /translation="MTAIAVTIAGSDSGGGAGIQADLKTFSALGVYGASVVTALTAQN
                     TLGVQGIHDVPPGFVAQQMDSVFSDLAVGAVKIGMLSRSPVIQTVAAGLERHRATNIV
                     LDPVMVAASGDRLLAAEAVETIKTALMPLALLVTPNLPEAAALLDTGMAEDENAMRSQ
                     GERILALGPRAVLMKGGHAQGRDSVDLLVDAAGCRRFVSPRVATENTHGTGCTLSSAI
                     AAGLARGLGLIEAVADAKAYISAAIGASGQLHIGRGHGPVHHFHRWWQDRSAG"
     gene            complement(1732..>2295)
                     /locus_tag="VHN20_03950"
     CDS             complement(1732..>2295)
                     /locus_tag="VHN20_03950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEX2724956.1"
                     /translation="RWTAVAVGFVGVLIMLMPHLDASGIARGLSAGPAIGALFALLGA
                     FCAAGATIQVRRLTHTETTGAIVLYFSLLAALLGLVTIVLGWRAPTIADLGLLVLTGI
                     LGGIGQILLTESYRHGDASLVAPFEYTTMIWALFVGWIAFGQLPQAAVIMGGTIVAIA
                     GVFVVWREHRLGLTRVKQIETAAQRPT"
BASE COUNT          361 a          776 c          783 g          375 t
ORIGIN      
        1 gaggggagtg gctcgcgtta atccatcacc gcggctttga ggatgcacac catcgtggcg
       61 cgcccgggcg tctcgctgac gcagcgcacc gtgtggggat ggtcgctgcg gtagcgcagg
      121 ctttcgcccg ccttggcgcg ctgcacgata ccgccggcct ccacctcgaa ctcgccttcg
      181 agcaccgaca gcgactcgac cgaaccgcgc tggtggggat cggaatcgag cacgccgccc
      241 ggctcagacg tcacgtcgta ccattgcagc cattcgatcg tcttgatcca gccgatgatg
      301 gcgagacgca tcttgccgtc gtccgagacc aggatcggcg tgtcgccgcg cgacgatttc
      361 tcgatgaacg gctcgtcgtc ggcggtggcg agcacgcgct cgatggaaat gtcgagcgcc
      421 tgcgacagcc gccagatggt cgcgagggtg ggattggtct cgttgcgctc gatctggctg
      481 ataatcgact tcgccacgcc cgactgctcg gacagctcgg acagcgacag gttgtaggcc
      541 ttgcgcagac gttggatggt cttgccgagc tggcccgaga tgatctgggc gccgctttcc
      601 agctcccttt gccggtcttt gccttcgatg cccatggcca cccgctgatc cgtttcggcg
      661 aacgatcgtt tcgtataacg taatgtggcg gagcgggccg gggggatcaa gcgcgcctga
      721 tggcgcggcg tcggcggctg gaaacgcggt taaccggcgc tccggtcctg ccaccagcga
      781 tggaaatggt gcacgggacc gtgcccgcgg ccgatgtgca actgccccga ggcgccgatc
      841 gcggcgctga tatacgcctt ggcgtcggcc accgcctcga tgaggccgag gcccctggcc
      901 agccctgccg cgatggcgga cgagagggtg catcccgtcc catgcgtgtt ctcggtcgca
      961 acgcggggcg aaacgaagcg tctgcaaccg gccgcgtcga ccagaagatc gacgctgtcg
     1021 cggccctggg catgaccgcc cttcatcagg accgcgcgcg ggccgagcgc caggatgcgc
     1081 tcgccctggc tccgcatggc gttctcgtcc tcggccattc cggtgtccag aagcgccgcc
     1141 gcctccggca gattcggggt gacgagcagg gccagcggca tcagcgccgt cttgatcgtc
     1201 tcgaccgcct cggccgcgag caggcggtcg ccgctggccg ccaccatgac ggggtcaagc
     1261 acgatatttg tcgcgcgatg ccgctccagg ccggccgcga ccgtctggat caccggcgag
     1321 cgcgacaaca tgccgatctt caccgcgccc acggcgaggt cggagaacac gctgtccatc
     1381 tgctgcgcga cgaagccggg tggaacgtca tggatgcctt gcacgcccag cgtattttgc
     1441 gcggtgagcg ccgtcaccac gctggcgccg tagacgccga gcgccgagaa ggtcttgagg
     1501 tctgcctgga ttccggctcc gccccctgaa tcggagccgg cgatggtcac ggcgatcgct
     1561 gtcatgactg cggagagggc ggcttcatct tgagcccagc cccccgggtt tctccttgtt
     1621 gggcaggatc cccggatcac gtccggggca ggcttttgct gcgagctgtg cgcttcgcgg
     1681 cggcatcaca tcaatgtcgg gccccttgca tggcttggca agggccggcc atcaggtcgg
     1741 ccgctgggcc gccgtttcga tctgcttgac gcgcgtcagc ccgagccggt gctcgcgcca
     1801 caccacgaac acgcccgcga tcgcgacgat ggtgccgccc atgatcacgg ccgcctgcgg
     1861 cagctgcccg aacgcgatcc agccgacgaa cagggcccag atcatggtcg tgtattcgaa
     1921 tggcgcgacg agcgaggcat cgccgtggcg gtagctctcg gtcagcagga tctggccgat
     1981 tccgccgaga atgccggtga gcacgagaag gccgagatcg gcgatcgtgg gcgcgcgcca
     2041 tccgagcacg atcgtgacca gtcccagcag cgccgccagc agcgagaaat agagcacgat
     2101 cgcgccggtc gtttccgtat gcgtgaggcg gcgtacctga atggtcgcgc cggccgcgca
     2161 gaacgcgccg aggagcgcga acagcgcccc gatcgccggg cccgccgaca ggccgcgcgc
     2221 gatcccgctc gcgtcgagat gcggcatcag catgatgagg acgccgacga agccgacggc
     2281 gaccgcggtc caccg
//
LOCUS       DATAIQ010000230         5403 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_288903, whole genome shotgun sequence.
ACCESSION   DATAIQ010000230 DATAIQ010000000
VERSION     DATAIQ010000230.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 5403)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5403)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5403
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_288903"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(72..1313)
                     /locus_tag="VHN20_03955"
     CDS             complement(72..1313)
                     /locus_tag="VHN20_03955"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009494122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEX2724957.1"
                     /translation="MRADVVVLGAGIIGVSVAVHLQKRGRAVVLVDRRGPGEETSFGN
                     AGLIQSEGIFPYGFPHDFGALVRYAMNNTTDAHYHLSAMPKLAPFLARYWWASRPTRH
                     AAIARCYAPLIQRSVPEHLSLAEEAGALPLIRQRGWIKLFRTQAQMDIAVQEADALKR
                     EFGVNYAALDRAAVAAKEPHLDDALIGGLHWTDPASVTDPHALTMAYAALFARLGGKV
                     LAGDARSFAESGDRWRMTTEAGPVEADAAVVALGPWSDTVFRRLGYHIPFAVKRGYHA
                     HYRPAGDAVLNHTILDLERGYLLAPMARGIRLTTGAEFALRDAPKTPVQLARAEPVAR
                     NLFPLGERVDPEPWMGSRPCTPDMMPIIGPAPRHKGLWFTFGHAHHGLTLGPVTGRLI
                     TEMMTGATPFTDPAPYRADRF"
     gene            1548..2225
                     /gene="rpe"
                     /locus_tag="VHN20_03960"
     CDS             1548..2225
                     /gene="rpe"
                     /locus_tag="VHN20_03960"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015928422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004750 - D-ribulose-phosphate 3-epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HEX2724958.1"
                     /translation="MTRPMRIAPSILSADFAHLGEAVAAVDEAGADWIHVDVMDGHFV
                     PNITLGPDIVKAIRPYSKKPFDVHLMIAPADPYLEAFAKAGADVISIHPEAGPHLHRS
                     LQTIRALGRKAGVVLNPGTPPSVVEPVLDAVDLILLMSVNPGFGGQAFIGSVCEKVRQ
                     VRTMVGDRDIDIEVDGGVTSDTAPLVAQAGANVLVAGSAVFRDGAYAQNIAAIRQAAE
                     AAVGRWA"
     gene            2239..3552
                     /gene="purB"
                     /locus_tag="VHN20_03965"
     CDS             2239..3552
                     /gene="purB"
                     /locus_tag="VHN20_03965"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009494126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004018 - N6-(1,2-dicarboxyethyl)AMP
                     AMP-lyase (fumarate-forming) activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HEX2724959.1"
                     /translation="MIPRYSRPDMVAIWSPETRFRIWFEIEAHATTALANLGVVPAEA
                     AEKIWEKGANATFDIARIDAIEREVKHDVIAFLTHLSEIVGPEARFVHQGMTSSDVLD
                     TCFSVQLVRASDLLLRDIDELLAALRRRAFEHKLTPTIGRSHGIHAEPTTFGLKLAQA
                     FAEFERCKIRLIEAQREIATCAISGAVGTFANIDPAVEDYVAEKMGLQVEPVSTQVIP
                     RDRHAMFFATLAVIASSVERLAIEVRHLQRSEVLEAEEFFSEGQKGSSAMPHKRNPVL
                     SENLTGLARMVRAYALPALENVALWHERDISHSSVERMIGPDATVTLDFALARLTGVI
                     DKLVIYPENMRKNLDRLGGLVHSQRVMLALTQKGVSREDAYRLVQRNAMPVWRGEGDF
                     LTLLAKDPEVGRHLSETELRASFNLDYHLKHVDTIFRRVFGDRAA"
     gene            3506..4819
                     /locus_tag="VHN20_03970"
     CDS             3506..4819
                     /locus_tag="VHN20_03970"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009494128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclopropane-fatty-acyl-phospholipid synthase
                     family protein"
                     /protein_id="HEX2724960.1"
                     /translation="MSIRSSDEFSEIGPHKGLATRLLREVFSRLVRRGALHLVTAGGE
                     HLKFGDGGSPAVTIRFTDPSAEWALLIDPELRTGELFMDGRLVLERGSIYDFLQLALQ
                     GSGGDRTVLALPALIRLRTMLRRLRPTNNLTRARRNVAHHYDLDDRLYSLFLDSDRQY
                     SCAYFEQPDASLEAAQLAKKRHIAAKLLIEPAHSVLDIGCGWGGLAFYLARVTGAASV
                     KGITLSEEQLAVARRRADEHGVAHRVSFDLIDYRDARGTFDRIVSVGMFEHVGRQFYD
                     AYFHTCRDLLADDGVMLLHTIGRMGPPYPTNPWIQRYIFPGGYLPSLSETMAAVEGAG
                     LFVTDVEVLRLHYADTLRAWRERFLARRDEAARLYDERFCRMWEFYLAASEATFRFED
                     TVVFQVQLAKRNDVVPLTRGYIAERETRLRVREKRVLPTFAEAAE"
     gene            complement(5140..>5403)
                     /locus_tag="VHN20_03975"
     CDS             complement(5140..>5403)
                     /locus_tag="VHN20_03975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724961.1"
                     /translation="IAPGDERLVETAALQHGLDELQPLRAADGREFGGESQIHHVRYV
                     MAGLVPASRRYVMAGLVPAIPFRKALPVMAGLVPAISIGKARR"
BASE COUNT          850 a         1895 c         1807 g          851 t
ORIGIN      
        1 gcccttcgac gcgagatggc cgggacaagc ccggccatga cagtcgcgaa actggagcgc
       61 tcccccccgc gtcaaaacct gtcggcgcgg tacggcgcgg ggtcggtgaa gggcgttgcg
      121 ccggtcatca tctcggtgat caggcggccc gtgacggggc cgagggtgag gccatggtgg
      181 gcgtggccga aggtgaacca caggcccttg tggcgcggcg ccgggccgat gatcggcatc
      241 atgtcgggcg tgcacgggcg cgagcccatc cacggctcgg gatcgacgcg ctcgcccagg
      301 ggaaagaggt tgcgggcgac cggctcggcg cgggccagct gcaccggcgt cttgggcgcg
      361 tcgcgcagcg cgaactccgc cccggtcgtc aggcggatgc cgcgcgccat cggcgccagg
      421 aggtagccgc gctcgaggtc caggatggtg tggttgagga cggcgtcgcc ggccggcctg
      481 taatgcgcgt ggtagccgcg cttgaccgcg aacgggatgt ggtagccgag ccgccggaac
      541 accgtgtcgg accacggccc cagcgccacg acggcggcgt cggcctcgac cggccctgcc
      601 tcggtcgtca tgcgccagcg gtctccgctc tcggcgaacg acctagcgtc gccggccaaa
      661 accttgccgc cgagacgcgc gaacagcgcc gcataggcca tggtcagggc atgcgggtcg
      721 gtgacggagg cgggatcggt ccagtgcagc ccgccgatca gcgcgtcgtc gagatgcggc
      781 tccttcgcgg cgacggcggc ccggtcgagc gcggcgtagt tgacgccgaa ctcgcgcttc
      841 agcgcatccg cctcctggac ggcgatgtcc atctgcgcct gcgtgcggaa cagcttgatc
      901 cagccgcgct ggcggatgag gggcaaggcc ccggcttcct cggccagcga cagatgctcg
      961 gggaccgagc gctggatcag cggcgcgtag cagcgcgcga tggcggcgtg gcgcgtcggc
     1021 cgcgacgccc accagtagcg cgccaggaac ggcgccagct tcggcatcgc cgacaggtgg
     1081 taatgcgcgt cggtggtgtt gttcatggcg tagcgcacga gcgcgccgaa atcgtgcggg
     1141 aagccgtacg ggaagatgcc ctcgctctgg atcaggccgg cattgccgaa cgacgtctcc
     1201 tcgcccggcc cgcgccggtc gaccaggacc acggcccggc cgcgcttctg tagatgcacc
     1261 gccaccgaca cgccgatgat gccggcgccc aataccacca cgtccgcgcg catgagccct
     1321 cgtcagtccc ctggacgggt tccgttcaga ttgaaggagc ccgctccgat cttttcgagt
     1381 cgcatgatcc tgccgggcga aattatccac cacggatcgt gtccggtgga ggctttcgcc
     1441 ggatcatgcg cctgtccgcc agataagcct gccatgccgg ctttgcacgg ggcatcgtgc
     1501 cgggaggcgt tgcgagcccc cggggcgcgt gttaccgccc tcgcgccatg accagaccga
     1561 tgcgcatcgc cccctccatc ctctcggccg acttcgccca cctcggcgag gcggtcgccg
     1621 ccgtcgacga ggccggcgcc gactggatcc acgtcgacgt gatggacggc catttcgtgc
     1681 ccaacatcac gctcgggccc gacatcgtca aagcgatccg gccctattcc aagaagccgt
     1741 tcgacgtgca cctgatgatc gcgcccgccg acccgtatct ggaagccttc gccaaggccg
     1801 gcgccgacgt catcagcatc caccccgaag ccgggccgca cctgcaccgc tcgctgcaga
     1861 cgatccgcgc gctcggcagg aaggccggcg tcgtgctcaa cccgggcacg cccccctccg
     1921 tcgtcgagcc ggtgctcgac gccgtcgacc tgatcctcct gatgagcgtc aatcccggct
     1981 tcggcgggca ggccttcatc ggctcggtgt gcgaaaaggt ccgccaggtc aggactatgg
     2041 tgggcgaccg cgacatcgac atcgaggtcg acggcggcgt cacgtccgac accgcgccgc
     2101 tcgtcgccca ggccggcgcc aacgtgctcg tcgccggctc cgccgtgttc agggacggcg
     2161 cctacgcgca aaacatcgcc gccatccggc aggccgccga ggcggccgtc ggccgctggg
     2221 cctgaaggga cgagagtcat gatcccgcgt tacagccgcc ccgacatggt ggcgatctgg
     2281 tcgcccgaga cgcgcttccg catctggttc gagatcgagg cgcacgcgac cacggccctc
     2341 gccaatctcg gcgtcgtgcc ggccgaagcg gcggagaaga tctgggagaa gggcgccaac
     2401 gccaccttcg acatcgcgcg catcgacgcg atcgagcgcg aggtcaagca cgacgtcatc
     2461 gccttcctca cgcatctttc cgagatcgtc ggccccgagg cgcgcttcgt gcaccagggc
     2521 atgacgtcgt ccgacgtgct cgacacctgc ttcagcgtgc agctcgtgcg cgcgtccgac
     2581 ctccttttgc gcgacatcga cgagctgctg gcggcgctgc ggcggcgcgc cttcgagcac
     2641 aagctgacgc cgaccatcgg ccgctcgcac ggcatccacg ccgagccgac cacgttcggc
     2701 ctcaagctgg cgcaggcctt cgccgagttc gagcgctgca agatccgcct gatcgaggcg
     2761 cagcgcgaga tcgccacctg cgccatctcg ggcgccgtcg gcaccttcgc caacatcgat
     2821 ccggcggtcg aggactacgt cgccgagaag atgggcctcc aggtcgagcc ggtgtcgacg
     2881 caggtgatcc cgcgcgaccg ccacgccatg ttcttcgcga cgctggcggt gattgcctcg
     2941 tcggtcgagc gcctggcgat cgaggtccgg cacctgcagc gcagcgaggt gctggaggcc
     3001 gaggagttct tctcggaggg ccagaagggc tcgtccgcca tgccgcacaa gcgcaacccg
     3061 gtgctgagcg agaacctgac cgggctcgcc cgcatggtgc gcgcctacgc gctgccggcg
     3121 ctcgagaacg tggccctctg gcacgagcgc gacatctcgc attcctcggt cgagcgcatg
     3181 atcgggccgg acgcgaccgt gaccctcgat ttcgccctgg cgcggctcac gggcgtgatc
     3241 gacaagctcg tgatctaccc cgagaacatg cgcaagaatc tcgacaggct cggcggcctc
     3301 gtccactcgc agcgggtcat gctggccctg acgcaaaagg gcgtctcgcg cgaggatgcg
     3361 taccggcttg tgcagcgcaa cgcgatgccg gtctggcgcg gcgaaggcga cttcctgacc
     3421 ctgctggcca aggacccgga ggtcggccgg cacctctccg aaaccgaatt gcgggcaagt
     3481 ttcaacttgg attaccattt gaaacatgtc gatacgatct tcagacgagt tttcggagat
     3541 cgggccgcat aaggggttgg cgacgcgcct tctccgggag gtgttttccc ggctcgtgcg
     3601 gcgcggcgcg ctgcacctcg tcaccgccgg cggcgagcat ctgaaattcg gcgacggcgg
     3661 cagcccggcc gtgacgatcc gcttcacgga tccgtctgcc gaatgggccc tcctgatcga
     3721 ccccgagctg cgcaccggcg agctgttcat ggacgggcgg ctcgtgctcg agcgcggctc
     3781 catctacgac ttcctgcagc tcgcattgca gggcagcggc ggcgatcgaa cggtcctcgc
     3841 gcttccggcg ctgatccgcc tcaggaccat gctgcggcgc ctgaggccga ccaacaacct
     3901 cacgcgcgcc cggcgcaacg tcgcgcatca ttacgatctc gacgaccgcc tctactcgct
     3961 gttcctcgat tccgaccggc agtattcctg cgcctatttc gagcagccgg atgcgagcct
     4021 cgaggccgcg cagctcgcca agaaacggca catcgccgcg aagctgctga tcgaacccgc
     4081 gcacagcgtg ctcgacatcg gctgcggctg gggcggcctc gccttctatc tcgctcgcgt
     4141 caccggcgcc gccagcgtca agggcatcac gttgtcggaa gagcagctcg cggtggcgcg
     4201 ccgccgcgcc gacgagcacg gcgtcgcgca tcgcgtctcg ttcgatctca tcgactatcg
     4261 cgacgcgcgc ggcaccttcg accgcatcgt ctcggtcggc atgttcgagc atgtcgggcg
     4321 gcaattctac gacgcctatt ttcacacctg ccgcgacctg ctcgccgacg acggcgtcat
     4381 gctgctgcac acgatcggca ggatggggcc gccttatccc accaatccct ggatccagcg
     4441 ctacatcttc cccggcggct acctgccctc gctgtccgag acgatggcgg ccgtcgaagg
     4501 cgcggggctg ttcgtgaccg acgtcgaggt gctgcgcctg cattacgcgg acacgctgcg
     4561 ggcgtggcgc gagcgcttcc ttgcccgccg cgacgaggcg gcgcggctct acgacgagcg
     4621 cttctgccgc atgtgggagt tctacctcgc cgccagcgaa gcgaccttcc gcttcgagga
     4681 cacggtcgtg ttccaggtgc agctggcgaa gcgcaacgac gtggtgccgc tcacgcgcgg
     4741 ctacatcgcc gaacgcgaga cgcgtttgcg cgtgcgcgag aagcgcgtgc tgccgacatt
     4801 cgccgaagcc gccgaatagc aacggccggt tcctgcacgc aagagcacgt ggcgctccag
     4861 ccgggactgt tgcaaggtgc ggcatgcaca catatccgcg ccttgtcatg gccgggctcg
     4921 tcccggccat cccgattcga gaggcgcggc gttcttccga catcccgcgc ggaaacgcgc
     4981 ggcgttcttc cgatcgagat caccggcaca aggccggtga tgacatcaga gaggggaatt
     5041 gatcgcggaa ccctagcgtt gtcatggccg ggcttgtccc ggccatctcg attggtggag
     5101 ctgacggccc gacgtttgcc accgccgtga gcagctgatt cagcgccgcg cctttccgat
     5161 cgagatggcc gggacaagcc cggccatgac aggaagtgct tttcgaaacg ggatggccgg
     5221 gacaagcccc gccatgacat aacgacggga ggccgggacg agcccggcca tgacataacg
     5281 cacgtgatgg atctgacttt cgccgccgaa ttcccgcccg tcagccgcgc gcaatggctg
     5341 aagctcgtcg agtccgtgct gaagggcagc ggtttcgacg agacgctcgt cgccaggagc
     5401 tat
//
LOCUS       DATAIQ010000231         2975 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_427052, whole genome shotgun sequence.
ACCESSION   DATAIQ010000231 DATAIQ010000000
VERSION     DATAIQ010000231.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2975)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2975)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2975
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_427052"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(233..433)
                     /locus_tag="VHN20_03980"
     CDS             complement(233..433)
                     /locus_tag="VHN20_03980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002717153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1192 domain-containing protein"
                     /protein_id="HEX2724962.1"
                     /translation="MAIDLLADERPRPKPPAHEMGQDLSALSIAELDERVDLLQREIE
                     RLKEARARKEASRDAASAFFKA"
     gene            762..1484
                     /locus_tag="VHN20_03985"
     CDS             762..1484
                     /locus_tag="VHN20_03985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003602429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell cycle transcriptional regulator TrcR"
                     /protein_id="HEX2724963.1"
                     /translation="MATTPLMPKATAVWLVENTSLTFDQIADFCKLHPLEVKGIADGE
                     VAAGIKGLDPVSNGQLTREEIEKAEADQDHRLKMSEPKVKLPEAKPTRKGPRYTPVSR
                     RQDRPNAILWLLRNHAELKDAQIMRLVGTTKTTIQQVRERTHWNSANLAPMDPVTLGL
                     CSQIDLDFEVQRAAKERPQMEPADGGQTLLPAEVTTAEPAAPAEPFGRMDAPRRPAEE
                     EKFDPDSVFAKLKQLKRPEGEE"
     gene            1648..>2975
                     /locus_tag="VHN20_03990"
     CDS             1648..>2975
                     /locus_tag="VHN20_03990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724964.1"
                     /translation="MSLQSRGTRPKNWPDAQHQGASRDHRVHVPSSAERRRIRKARAR
                     RRVLTTLAASLLTCTALTAGAFIFPETAADVVKAVDRLQPGAGWTAMFPEKSAPAPVV
                     AAASEKPEPRVQPWRTAQAQKVAAPGPSKPAVANPTETASVSIAKERIREFDWLPDRP
                     IEAADGDAAFKLRATLVSPDAASTAAVPLASAGEPLASRPGATTQTGDATPAGGAAAT
                     DKARASNVRTVTTTAEAGVAMAKDAAAFKLGAAAAEPETFVTAPDAHRASTPDLSTAV
                     AATETAPLPEPVPANDPPAPTSVVAAAAEAATATAAAEAAPPDSIAATAKSAAVPVAV
                     ATAIATAPDTPVVLNLAVKTEVAALAETPTAAAPRARAAAKGPTATEVAEMIKRARAR
                     LDIGDIAGARLLLERAASGNDPNALMALAETYDPAMLSRLGVRGPKGDPA"
BASE COUNT          552 a         1031 c          962 g          430 t
ORIGIN      
        1 gtacgacccg tcgcgtctcg cttatgatga tcatgaggtt aatggccgcg atccaattag
       61 ccaaaaaaag agccgcctcg cggcggctca aagtcataac agggcggcgt caaacagagt
      121 ggacaggagc cactcgacat ccagaagact ggataagcct gcttatagat cgcaatcctt
      181 aagagaaggt taaggatgaa aattccgtct ccatgatcgc aacaatttag cctcacgctt
      241 tgaagaaggc gctggccgcg tcgcgcgacg cctccttgcg ggcgcgcgcc tccttgagcc
      301 gctcgatctc gcgctgcagc aggtcgacgc gctcgtcgag ctcggcaatg gaaagggccg
      361 acaggtcctg gcccatttcg tgcgccggcg gcttcggacg cggccgctca tcggcaagaa
      421 ggtcgatcgc catgcttccc tcctgtgacg gatcgaagct ctcaagctaa gtcgtcgtcg
      481 gctggttgcc aacgaccttc ggcgtggaag ccgccccctg cccgcgcccg cctgaaccgc
      541 aggcgggaaa aaccgccagg agaacaccat gcctggaccg gtgattcgac gcaccgccgc
      601 cttcccggcg gcgtggcacg caatcattgc aactggccgc tcgcgtccct ataatctccc
      661 tgtttccctc acattgtgag acgagatgct ccggccgacg ccggttcgga gcgcgagaga
      721 tttttgccct gtgcactgaa ggcccaggag gttcaagcac catggccacc actcccctca
      781 tgcccaaagc gaccgccgtc tggctggtcg agaacacgtc cctcaccttc gatcagatcg
      841 ccgatttctg taagctgcat ccgctcgagg tcaaaggcat cgccgacggc gaggttgctg
      901 ccggcatcaa gggcctcgac cccgtgtcga acggccagct cacccgcgag gagatcgaga
      961 aggccgaggc cgatcaggac catcgcctca agatgtcgga gccgaaggtc aagctgcccg
     1021 aagccaagcc gacccggaag ggccctcgct acacgccggt gtcgcgccgc caggaccggc
     1081 ccaacgccat tctctggctg ttgcgcaacc atgcggagct gaaagacgcg cagatcatgc
     1141 gcctcgtcgg cacgaccaag acgaccatcc agcaggtgcg cgagcggacc cattggaatt
     1201 ccgccaacct ggcgcccatg gacccggtca ccctcggcct ttgctcgcag atcgatctcg
     1261 atttcgaggt gcagcgcgcc gccaaggagc ggccgcaaat ggagccggcc gacggcggcc
     1321 agacgcttct tcccgccgag gtcacgaccg cggagccggc agcaccggca gaaccgttcg
     1381 gccgcatgga cgcgccgcgc aggccggccg aggaggagaa gttcgatcct gattcggtgt
     1441 tcgcgaagct gaagcagctc aagcgtcccg aaggcgagga gtaagccgcg gcgccttcac
     1501 ctgtggaaaa ggcgaagaat ccacaggctc ttacggctcg cgaagtgggt tggaaaaagc
     1561 ctggctgctt gaccctgtca taacttcctc tcattgtatt cgaagcactt aagggggctg
     1621 ggtgcttaga taagggaggg aggccccatg tcattgcagt ctcgcggtac caggcccaag
     1681 aactggccgg acgcgcagca ccaaggcgct tcccgggatc atcgagtcca cgtcccgtca
     1741 tctgcggagc ggcggcgcat ccgcaaggcg cgcgcccgcc gccgcgttct gacgacgctc
     1801 gcggcgagct tgctcacgtg cacggcgctg acggcgggcg ccttcatctt tcccgagacc
     1861 gcggccgacg tcgttaaggc cgtggacagg ctccagccgg gagccggctg gaccgcgatg
     1921 ttcccggaaa agagcgcgcc agcacccgtc gttgcggcag cgagtgaaaa accggagccg
     1981 cgcgtgcagc cgtggcggac ggcgcaggcc cagaaggttg cggcgcccgg accatccaag
     2041 ccggccgtcg ccaatcccac cgaaaccgcc agcgtcagca tcgcgaagga gcggatccgg
     2101 gagttcgact ggctgccgga cagaccgatc gaggcagcgg acggtgatgc cgccttcaag
     2161 ctgcgtgcga ccctggtgtc cccggatgcg gcatcgacgg ctgccgtccc gcttgcttcc
     2221 gcaggcgagc cgctcgcgtc caggccgggc gcaaccacgc aaacggggga cgcgacgcca
     2281 gccggcggcg ccgccgcgac cgacaaggcg cgggcatcga acgtgcgcac cgtgacgacc
     2341 accgccgaag ccggcgtggc catggccaag gatgcggccg ccttcaagct cggcgcggcc
     2401 gcagccgaac ccgaaacctt tgtgacggcg ccggacgctc accgggcttc gacgcccgat
     2461 ctgtcgactg ccgtggccgc gaccgagacc gcgcccttgc ccgagccggt gccggcgaac
     2521 gatccccctg ccccgacgag cgtcgttgca gcggccgccg aagccgcaac cgccacggcg
     2581 gcggcggagg ccgctccgcc ggacagcatc gccgcaacgg cgaaatccgc tgccgtcccg
     2641 gtcgccgtcg cgacggcgat tgcgacggcg ccggatacgc ccgtggtcct gaacctggcc
     2701 gtcaagaccg aggtcgccgc gctcgccgaa acgccgacgg cagctgcgcc ccgtgcgcgt
     2761 gcggccgcga aagggcccac cgccacggaa gtcgcggaga tgatcaagcg ggcgcgcgcg
     2821 cgtctcgaca tcggcgacat cgccggggct cgcctgctcc tcgaacgggc cgcctccggc
     2881 aacgatccga atgcgctgat ggcgctggcc gagacctatg atccggcgat gctgtcgcgg
     2941 ctcggcgtgc gcggcccgaa aggcgatccg gccaa
//
LOCUS       DATAIQ010000232         4146 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_380871, whole genome shotgun sequence.
ACCESSION   DATAIQ010000232 DATAIQ010000000
VERSION     DATAIQ010000232.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4146)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4146)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4146
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_380871"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..327)
                     /locus_tag="VHN20_03995"
     CDS             complement(<1..327)
                     /locus_tag="VHN20_03995"
                     /inference="COORDINATES: protein motif:HMM:NF018979.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter TctB
                     family protein"
                     /protein_id="HEX2724965.1"
                     /translation="MNIAIALVFLALSLVLVTGTWDLPYWSDFAPGPAFAAIWTAAAA
                     SALALALLVQERRVPSIEAVDWPDRSAWLRVVLTVAALCLTLVLAPTLGFPVSVALLT
                     FFVLTIV"
     gene            complement(347..1330)
                     /locus_tag="VHN20_04000"
     CDS             complement(347..1330)
                     /locus_tag="VHN20_04000"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEX2724966.1"
                     /translation="MSRALVFACALTMGALALTGGATAQNKAPKGPIEITVGTSPGGT
                     PDVIMRRMAKILNDEKIVENPLVVTNRTGGSWAVSNNWVLGKKGDENTVYGVAQPVFT
                     TPITQGQKPVYNQLTPIAMFIQGDLIVCAQPNAPATLAEIVKQAKDKPRSVKLAGAQA
                     GSTDHMVSGLVEKAGDVKFNYIPFDGGGAVQAAFLGGNVDLMVLTIDEMLPLLQSKKL
                     KPVAILSEQRRSEPELKDIPTAKEQGLAVVWGQAWGLAAPPETDPALVKWWDDKIARL
                     VKTEGWKNFIKETYRRSDYVDSSRVKQHFEQLHQEHLAVLKDLGLAKTAAQ"
     gene            1390..2385
                     /locus_tag="VHN20_04005"
     CDS             1390..2385
                     /locus_tag="VHN20_04005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724967.1"
                     /translation="MSTLPAHFLRVARAPAACRACTCFRACQCFHVAAVLDEFTRAAL
                     VELQHRAECRGGRFDCALASSEGAMSEATTTIDHDEIRRWAEERGGRPAVVRTGRSDD
                     GILRFDFGEDDPQLEEIPWEEFMRIFEENNLALLHQDTVESGETSRFFKFVDRSAEES
                     GGSRTRGTQRGRRSAASKRASSGRRSSAGAAKRAAARGGAKRPAKSAGATKRGGRASA
                     KSAASKARGGAGGRTASRTAAKRTTKTGATKRSGAKSAGATKRGAGKSAGAAKRGAAR
                     TSGKTSGKTSGKAGAKKGAAKRGSAATRSQKGAKGGAKKSAARGRATRGGSKSRR"
     gene            2623..>4146
                     /locus_tag="VHN20_04010"
     CDS             2623..>4146
                     /locus_tag="VHN20_04010"
                     /inference="COORDINATES: protein motif:HMM:NF012356.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HEX2724968.1"
                     /translation="MPDIDASAAAGARTISRSRPTARPGMGAIPFDGGVAFRVWAPNA
                     EAVAVAGDFNGWSETDAPLAREENGYWSGEAHAARPGHQYQYVVTYRGERLERHDPSG
                     YDVDHSNGSTVIVDPAVFDWRGEPQFAMPPWNELVIYEMHIGTFNDQPGGQPGTLDTA
                     IARLAHVAELGANAIQVMPLAEFPGGFSWGYNPADIFAVESDYGGPPGLVAFVKAAHR
                     LGIAVIIDVVYNHLGPDDLDTWLFDGWHENGKGGIYFYNDWRSRTPWTDSGRPDYGRG
                     EVRQYLRDNALFWLDAFDADGLRWDMTLYIRTVDGNEHDGGQTLPDGWRLMQWINSEI
                     NRRSPWKISIAEDLQDNPWLTADRADGGAGFDAQWAANFVHPVRRAVIAPWDDQRSMA
                     AIRDAILGRYGASALSRVIYTESHDEVANGKARVPYEISSDDPGGWLARKRSTLGAVL
                     VFTAPGIPMLFQGQELLEDEWFRDTDPLDWGKKDRFAGIFRMYQDLVRLRRNWDDLMR
                     "
BASE COUNT          731 a         1384 c         1401 g          630 t
ORIGIN      
        1 gacaatcgtc agaacgaaga acgtcagcag cgcgacgctc accggaaacc cgagcgtcgg
       61 cgccagcaca agcgtcaggc acaacgccgc gaccgtcaat acaacccgca gccatgccga
      121 ccggtcgggc cagtccacgg cctcgatgct gggcacgcgg cgctcctgaa cgaggagtgc
      181 cagcgccagc gcgctcgccg ccgcggccgt ccagatcgcc gcaaaggcgg gcccgggcgc
      241 gaaatccgac cagtacggca ggtcccatgt accggtcacg aggacgagcg acagcgccag
      301 gaagaccagc gctatcgcga tgttcacgcc ccgcacgagg ccgcgctcac tgtgccgcgg
      361 tcttggcgag gccgaggtcc ttcagcaccg cgaggtgctc ctgatggagc tgctcgaaat
      421 gctgcttgac gcgcgagctg tcgacgtaat cgctgcgccg gtaggtctcc ttgatgaagt
      481 tcttccagcc ctcggtcttg accagccgcg cgatcttgtc gtcccaccat ttgacgagtg
      541 ccggatcggt ctcgggcggc gccgcgaggc cccaggcctg tccccacacc acggcgagac
      601 cttgctcctt cgcggtcggg atgtccttca gctcgggctc cgaccggcgc tgttcgctga
      661 ggatggctac cggcttgagc tttttgctct gcaggagggg cagcatctcg tcgatcgtga
      721 gcaccatcag gtcgacgttg ccgccgagga atgccgcctg caccgcgccg ccgccgtcga
      781 acgggatgta gttgaacttc acgtcgccgg ccttctcgac caggccgctg accatgtggt
      841 cggtggagcc ggcctgggca cctgcgagct tgacgctgcg cggcttgtcc ttcgcctgct
      901 tgacgatctc cgccaacgtc gccggagcgt tcggctgtgc gcacacgatc agatcgccct
      961 ggatgaacat ggcgatcggg gtgagctggt tgtagaccgg cttctgccct tgcgtgatcg
     1021 gcgtcgtgaa gaccggctgg gcgaccccgt aaacggtatt ctcgtcgccc ttcttgccga
     1081 ggacccaatt gttggagacg gcccaggacc ccccggtgcg attggtgacc acgagggggt
     1141 tctcgacgat cttctcatcg ttgaggatct tggccatgcg ccgcatgatc acgtcgggcg
     1201 tcccgcccgg gctggtgccg acggtgatct cgataggccc tttaggtgcc ttgttctgcg
     1261 cggttgcgcc gcctgtcagt gccagcgctc ccatcgtcag cgcgcacgca aaaaccagtg
     1321 ccctgctcat gcaaccattc ctccctgacc gttgttgtcg gcgcggaagc tagggctgcg
     1381 gacgagacgg tgtcaacgct gccggcgcac tttttacgcg ttgcgcgcgc tcccgccgct
     1441 tgccgcgcat gcacgtgctt tcgcgcgtgc cagtgctttc atgttgcagc ggtgcttgac
     1501 gaattcacgc gagcggcgct tgttgagttg cagcacagag cagagtgccg gggtgggcgt
     1561 tttgattgcg cactggcctc atcggagggt gcaatgagcg aagctacgac gactattgat
     1621 catgatgaaa tccgccgctg ggccgaggag cgcggcggca ggcccgcggt cgttcggact
     1681 ggccgcagcg acgacggcat cctgcgcttc gacttcggcg aggacgaccc tcagctcgag
     1741 gaaattccgt gggaagaatt catgcggatc ttcgaggaaa acaatctcgc gctcctgcat
     1801 caggacacgg tcgaatccgg cgagaccagc cgcttcttca aattcgtcga ccgcagcgcc
     1861 gaggagagcg gcggcagccg cacccgcggc acacagcgcg gccgccgcag cgcagcctcg
     1921 aagcgtgcgt cgagcggccg gcgcagctct gccggagcgg cgaaacgcgc cgcggcgaga
     1981 ggcggcgcca agcgcccggc gaagagcgcg ggcgcgacga agcgaggcgg ccgcgccagc
     2041 gcgaagagcg cggcatcaaa ggcgcgcggc ggcgccggcg gcaggaccgc atcgcggacg
     2101 gcagcaaagc gcacgacgaa gaccggagcc acgaaacgca gcggcgccaa gagcgcgggc
     2161 gcgacgaagc gcggggccgg caagagcgcc ggcgccgcga agcgcggcgc cgcgaggacc
     2221 agcggcaaga ccagcggcaa gaccagcggc aaggccggcg ccaagaaggg cgcagcaaag
     2281 cggggaagcg cggcgacccg ctcgcaaaag ggggccaaag gcggtgccaa gaagtcagcg
     2341 gcgcgcggcc gcgcgacccg cggcggatcg aagtcgcgcc ggtaggcgca gcatcggcgc
     2401 cgcttctccc ggcgcgcagc acgacgtatg tggcccgcgc ttgcgcgggc cacgccaggc
     2461 cggcaacggg cagagccagc gcgccgggcc ggagcaatgt tcggcggaac ccggtccggt
     2521 tcgccgacgg agaatacgtc ataacaagag ccagagccca ttccacgtga gtggaaacgg
     2581 ctctacgctg aacgcagctt caaccggacg tagaaggcga cgatgcccga catcgatgcc
     2641 tctgccgctg caggcgcacg aacgatttca cgcagccgcc cgaccgcgcg gccgggaatg
     2701 ggcgcgatcc cgttcgacgg cggcgtggcg tttcgcgtgt gggcgccgaa cgcggaagcg
     2761 gtcgcagtgg cgggggattt caacggctgg tccgagaccg acgcccctct tgcgcgcgag
     2821 gaaaacggct actggtctgg cgaggcgcat gctgcgcggc caggacatca gtatcagtat
     2881 gtcgtcacct accgcggcga gcgcctggag cgccatgacc catccggtta cgacgtcgac
     2941 cattccaacg gcagcacggt gatcgtcgac ccggcggtgt tcgactggcg cggcgagcca
     3001 caattcgcca tgccgccctg gaacgagctg gtcatctacg agatgcatat cggcacgttc
     3061 aacgaccagc cgggcgggca gcccggcacg ctcgacaccg ccattgcccg gcttgctcat
     3121 gtcgcggagc tcggcgcaaa cgccatccag gtcatgccgc tcgccgagtt tcccggcggc
     3181 ttctcctggg gatacaaccc ggccgacatt ttcgcggtcg aaagcgacta cggcggccct
     3241 cccgggctcg ttgccttcgt caaggcggcc caccgtctcg gcatcgcggt gatcatcgac
     3301 gtcgtctaca accacctcgg gcccgacgac ctcgacacgt ggctgttcga cggctggcac
     3361 gagaacggca agggcggcat ctatttctac aacgactggc gctcgcggac gccgtggacc
     3421 gacagcggtc ggcccgatta cgggcgcggc gaggtccggc agtatctgcg cgacaacgcc
     3481 ctgttctggc tcgacgcgtt cgacgccgac gggctgcgtt gggacatgac gctctacatc
     3541 cgcacggtcg acggcaacga gcacgacggc ggccagaccc tcccagacgg ctggcggctg
     3601 atgcagtgga tcaacagcga gatcaaccgc cgctcgccgt ggaagatcag catcgccgaa
     3661 gacctccagg acaacccgtg gctcacggcc gatagagccg acgggggggc cggcttcgat
     3721 gcgcaatggg cagcgaactt cgtgcatccc gtgcgcaggg cggtgatcgc gccttgggac
     3781 gaccagcgca gcatggccgc gatccgtgac gccatcctcg gccgctatgg ggccagcgcc
     3841 ttaagccgcg tgatctacac cgaatcgcac gatgaggtcg ccaacggcaa ggcccgtgtg
     3901 ccctacgaga tctcatcgga cgatccgggc ggctggttgg cacgcaagcg atccaccctc
     3961 ggggccgtac tggtgttcac ggctccaggc atcccgatgc tcttccaggg acaggaactt
     4021 ctggaagacg agtggttccg cgacaccgat cccctggact ggggcaagaa ggatcgtttc
     4081 gccggaatct tccgcatgta ccaggatctc gtgcggctgc gacgcaactg ggacgacctg
     4141 atgcgc
//
LOCUS       DATAIQ010000233         2881 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_427221, whole genome shotgun sequence.
ACCESSION   DATAIQ010000233 DATAIQ010000000
VERSION     DATAIQ010000233.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2881)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2881)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2881
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_427221"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..316
                     /locus_tag="VHN20_04015"
     CDS             <1..316
                     /locus_tag="VHN20_04015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012760322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="L-iditol 2-dehydrogenase"
                     /protein_id="HEX2724969.1"
                     /translation="WPLDLAAELTRERGRLIVAGYHQDGPRQVNMWLWNWRGLDVINA
                     HERDPKIYVQGIREAVEAVASGRIDPAPLYTHRFPLERLGQALDATRDRPDGFLKALV
                     TC"
     gene            310..1335
                     /locus_tag="VHN20_04020"
     CDS             310..1335
                     /locus_tag="VHN20_04020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEX2724970.1"
                     /translation="MLKPAAVDPHAARLARPRIGFLGVGWIGRHRMQAIIETGVADIV
                     AIADAVPDVALEAGRLAPAAALVSTLDQILDAAVDGVVIATPSAMHAQQSITALQRGA
                     AVFCQKPLGRTASEARAVVDAARAADRLLAVDLSYRFTDGMRRIRDVVRSGALGRVYA
                     VDLVFHNAYGPDKAWFYDPALAGGGCVMDLGVHLVDLALWTLDFPEVAGVSAKLFAGG
                     APLADRRAQVEDYAVATLDLGTGAAVQLACSWRLQAGCDAIISTAFYGTEGGARLGNV
                     DGSFYDFVAERFRGTARETLAAPPDAWGGRAAADWAARLAAGARFDAAAERLVDVAHV
                     LDRIYGR"
     gene            complement(1406..2791)
                     /locus_tag="VHN20_04025"
     CDS             complement(1406..2791)
                     /locus_tag="VHN20_04025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014492103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724971.1"
                     /translation="MRIAALAAALALAAPAWAQVEKKDMELVGYNDLQARSAYQPTIA
                     RQGERYIAYVGHHGGKAANPQTGQSEPNGTSVIDVTDPANPKYLAHIPGDAGEGEAGG
                     AQMVRVCDGKSLPKGDRSAVYMLRTFGNDGHEVWNVADPAKPSLVTKINKGLKGTHKN
                     WWECDTGIAYLVSGVEGWRTRRMTEVFDLSDPAKPVKIRDFGLPGQQPGTSGDVPTDL
                     HGPIVLGNRIYFGYGTARGGVLQIVDRDKLLNGPKEPTPENLKAPEIGRLVMSPLSGA
                     HTTYPLPKMPVPGFARFKDGATRDFVMIVNESTSNECQEAAQFIWFADVTVQDKPQMV
                     SHYAVPETSGNFCERGGRFGAHSSNESFAPIYNKKIAFIAWFNAGVRAIDIRDPFNPK
                     EVAHFIPAITEKTDKRCIKVDGQDRCKVAIQTNNVETDDRGYVYIVDRANTGMHILEL
                     TGEPKQLAEIR"
BASE COUNT          383 a          983 c          985 g          530 t
ORIGIN      
        1 atggccgctc gacctcgcag cggagctgac gcgggagcgg ggccggctga tcgtggccgg
       61 ctaccaccaa gacgggccgc gtcaggtcaa catgtggctg tggaactggc gcggtctcga
      121 cgtgatcaac gcccacgagc gcgacccaaa aatttacgtg cagggcatcc gcgaggccgt
      181 cgaagcggtc gcctccggca ggatcgatcc cgcgccgctc tacacgcacc gcttcccgct
      241 cgagcgtctc ggtcaggcgc tcgatgcgac gcgcgatcgg cccgacggct tcctcaaggc
      301 cctggtgaca tgctgaagcc ggctgccgtc gacccgcatg ctgcgcggct ggcccgtccc
      361 cgcatcggct ttctcggggt gggctggatc ggccggcacc gcatgcaggc gatcatcgaa
      421 accggcgtcg ccgacatcgt cgccatcgcc gacgccgtcc cggacgtggc attggaagcg
      481 gggcgcctgg cgcccgccgc ggcactggtc tcgacgctgg accagatcct ggacgcggcc
      541 gtcgacgggg tcgtgattgc cacgccgagc gccatgcatg cgcaacagtc gatcaccgcg
      601 ctgcaacgcg gcgcggcagt tttttgccag aaaccgctcg ggcgaacggc gagcgaggcg
      661 cgcgcggtcg tggacgcggc gcgcgcggcc gaccggctgc tcgcggtcga tctctcctat
      721 cgcttcacgg acggcatgcg ccgcattcgc gacgtcgtgc gctcgggcgc gctcggccgg
      781 gtctacgcgg tcgatctcgt gttccacaac gcctacggcc ccgacaaggc gtggttctac
      841 gatccggcgc tcgcgggcgg cggctgcgtg atggacctcg gcgtgcacct cgtcgacctc
      901 gccttgtgga cgctcgactt tccggaggtc gccggcgtct cggcaaagct gttcgctggc
      961 ggcgcgcccc tcgccgaccg ccgggcgcaa gtcgaggatt acgccgtcgc cacgctcgat
     1021 cttgggaccg gcgccgccgt gcagctggcc tgctcgtggc ggctgcaggc gggctgcgat
     1081 gcgatcatct cgaccgcctt ctacggcacc gagggcggcg cgcgcctcgg caacgtcgac
     1141 ggctcgttct acgattttgt cgccgagcgc ttccgcggca ccgcccgcga gaccctggcg
     1201 gcgccgccgg acgcatgggg cgggcgggcg gccgccgact gggccgcgcg cctcgccgcc
     1261 ggcgcacgct tcgatgccgc cgccgagcgg ctggtcgacg tggcgcacgt gctcgaccgc
     1321 atctacgggc gctagggttt gccccacaat ggtcgaacgc ccggcatgtc gggcgttcgc
     1381 gggttcgtgg cccctttggg actgcctacc gaatctcggc cagttgcttc ggctctcccg
     1441 tcagctcgag gatgtgcatg ccggtattgg cccggtcaac gatgtagacg tagccgcggt
     1501 cgtcggtctc gacgttgttg gtctggatcg ccaccttgca gcggtcctgg ccgtcgacct
     1561 tgatgcagcg cttgtcggtt ttttccgtga tcgccgggat gaagtgcgcg acctctttcg
     1621 gattgaaggg atcgcggatg tcgatggcac ggacgccggc attgaaccac gcgatgaagg
     1681 cgatcttctt gttatagatg ggcgcgaagc tctcgttcga cgaatgcgcg ccgaaccggc
     1741 cgccgcgttc gcagaagttg ccgcttgttt cgggcacggc gtaatgcgag accatctgcg
     1801 gcttgtcctg gaccgtcacg tccgcgaacc agatgaactg cgccgcttcc tggcactcgt
     1861 tcgaggtgga ctcgttgacg atcatcacga agtcgcgcgt ggcgccgtcc ttgaacctgg
     1921 cgaacccggg aaccggcatc ttcggcagcg ggtaggtggt gtgggcgccg ctgagcggcg
     1981 acatgacgag ccgtccgatc tcgggcgcct tcaggttctc cggcgtcggc tccttggggc
     2041 cgttgagaag cttgtctcgg tcgacgatct gcaggacgcc gcccctggcc gtgccgtagc
     2101 cgaaatagat gcggttgccg agcacgatcg gcccgtgcag gtcggtcggc acgtctccgc
     2161 tcgtgccggg ctgctggccc ggaaggccga aatcgcggat cttgacaggc ttcgccggat
     2221 cgctgaggtc gaacacctcg gtcatgcgcc gggtgcgcca gccttccacg cccgacacca
     2281 gataggcaat gccggtgtcg cattcccacc agttcttgtg cgtgcctttg aggcccttgt
     2341 tgatcttggt gacgaggctc ggcttggccg gatcggcgac gttccagacc tcgtggccgt
     2401 cgttgccgaa cgtgcgcagc atgtagaccg cgctgcggtc acctttgggc aggctcttgc
     2461 cgtcgcatac gcgcaccatc tgggcgcccc cggcctcgcc ctcgcccgca tcgcccggga
     2521 tatgcgccag gtatttggga ttggccggat cggtcacgtc gatgaccgag gtgccgttcg
     2581 gctcgctctg cccggtctgc ggattggccg ccttgccccc atggtggccg acataggcga
     2641 tgtagcgctc gccctgccgc gcgatcgtcg gctggtaggc gctgcgcgcc tgcaggtcgt
     2701 tgtagccgac cagctccatg tccttcttct cgacctgggc ccaggccggt gccgccaacg
     2761 ccagtgccgc cgccaatgcc gcgatgcgca tgtccgcctc ccgtcagttg atcgccttgc
     2821 ggtaatacga ttcgtcgatg tacttctccg ggtcggtgag cggcttctgc gggcgaccga
     2881 a
//
LOCUS       DATAIQ010000234         1782 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_189763, whole genome shotgun sequence.
ACCESSION   DATAIQ010000234 DATAIQ010000000
VERSION     DATAIQ010000234.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1782)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1782)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1782
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_189763"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..763
                     /locus_tag="VHN20_04030"
     CDS             <1..763
                     /locus_tag="VHN20_04030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020177359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /protein_id="HEX2724972.1"
                     /translation="LTVFTITASMEIAGRLRGGKGLFGWIAALPWERPMVLATDMAFF
                     MLWFGGGGGLINMSYGMNAMIHNTSWVTAHFHLIFGGTVVIMYFAIAYAIWPVLTGRM
                     PASLRAQRLQLWLWFVGMMVMTLPWHYLGLQGQWRRVATFNYADPIIAPWGPWVIVSL
                     VGGVILLASALLFMWNIAEFHRARARAVVTAGLRPLYALAVHPPLRLPAALNGFALWN
                     VLVLVLMAAAYGYPIAQFFFIDPPQAIVHRVDGRG"
     gene            767..1585
                     /locus_tag="VHN20_04035"
     CDS             767..1585
                     /locus_tag="VHN20_04035"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEX2724973.1"
                     /translation="MQPAEPEALDRPWRYWASIVIIGVLGFSVVFGFLVLPVVQGFAA
                     GIDPFTAICRAIGIAPGSPAMPQPPSAAKAQPTTRVAWSTDLLRNLSRPTPAGAAVAQ
                     GCVACHGERGIASDPQNPNLAGQSAVAIYKQLHDYRTGSRAHDIMTGIAQALEEQQVP
                     DVAAHFAAANRLSLDPTTAGVLDEDIVQLVEKGDPARSLPACNACHGATAGGPIETPT
                     IAQQNRDYLANQLRAFKAGARRNDIYTRMRSVAARLSEREIDRLAAYYSTTLQR"
BASE COUNT          259 a          631 c          595 g          297 t
ORIGIN      
        1 gctcaccgtg ttcacgatca cggcctccat ggagatcgcc gggcgcctgc gcggcggcaa
       61 ggggctgttc ggttggatcg ccgcgctgcc ctgggagcgt ccgatggtgc tcgccaccga
      121 catggccttc ttcatgctgt ggttcggcgg cggcggcggg ctcatcaaca tgagctacgg
      181 catgaacgcc atgatccaca acacgtcgtg ggtgacggcg catttccacc tgatcttcgg
      241 cggcaccgtg gtgatcatgt atttcgccat cgcctacgcg atctggccgg tgctgaccgg
      301 gcgcatgccg gcgtcgctgc gcgcgcagcg cctgcagctc tggctgtggt tcgtcggcat
      361 gatggtgatg accctgccgt ggcattatct cggcctgcag ggacaatggc ggcgcgtcgc
      421 cacattcaac tacgccgacc cgatcatcgc gccctggggg ccatgggtga tcgtgtcgct
      481 ggtcggcggg gtgatcctgc tggcgagcgc tttgctgttc atgtggaata tcgccgagtt
      541 ccaccgcgcc cgcgcccgcg ccgtcgtgac ggcgggcctg cggccgcttt atgcgctcgc
      601 cgtgcatccg ccgttgcgcc tgccggcggc gctcaacggc ttcgccctgt ggaacgtgct
      661 ggtgctggtg ctgatggcgg cggcctacgg ctacccgatc gcgcagttct tcttcatcga
      721 cccgccgcaa gccatcgtgc accgcgtcga cggcagagga tgagccatgc agcctgccga
      781 acccgaagcc ctcgatcggc cgtggcgcta ctgggccagc atcgtcatca tcggggtgct
      841 cggcttctcc gtggtgttcg gctttctcgt gctgcccgtc gtgcagggct tcgccgccgg
      901 catcgatccg ttcacggcga tctgccgcgc gatcggcatc gcgccgggct cgccggccat
      961 gccgcagccg cccagcgccg ccaaggcgca gccgaccacg cgcgtggcgt ggagcacgga
     1021 cctgttgcgc aacctctccc ggccgacacc ggcgggcgcc gcggtcgcgc agggctgcgt
     1081 cgcctgccac ggcgagcgcg gcatcgcctc cgatccgcag aacccgaacc tcgccggcca
     1141 gtcggcggtt gcgatctaca agcaactgca tgattaccgg accggcagcc gcgcgcacga
     1201 catcatgacg ggcatcgcgc aagcgctgga ggagcagcag gtcccggacg tcgcggcgca
     1261 tttcgctgcc gccaaccgcc tttcgctcga tccgacgacc gccggcgtgc tcgacgagga
     1321 catcgtgcaa ctcgtcgaga agggcgaccc ggcgcgcagc ctgccggcct gcaacgcctg
     1381 ccacggcgct accgccggcg ggcctatcga gacgccgacg atcgcccagc agaatagaga
     1441 ttacctggcc aaccagctgc gcgcgttcaa agccggcgcg cgccgcaatg acatctacac
     1501 gcgcatgcgg agcgtcgccg ccaggctgag cgagcgcgag atcgaccggc tcgcggcgta
     1561 ttactcgacc acgctgcagc ggtaggcccg cttacgatcc ctcgcgtgtc atcaccgggc
     1621 tcgtcccggt gatctcgata gagaaacgca cgcagcccga tcgggatggc ggggcctagc
     1681 ccggccatga cgaggcgcag aggcgcccta ccgcccgctc tcgaggatgc gcgagatcac
     1741 ccgggccgtg tagtcgacca tcggcacgat gcgcgcgtag tt
//
LOCUS       DATAIQ010000235         2140 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_289337, whole genome shotgun sequence.
ACCESSION   DATAIQ010000235 DATAIQ010000000
VERSION     DATAIQ010000235.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2140)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2140)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2140
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_289337"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1839
                     /locus_tag="VHN20_04040"
     CDS             <1..1839
                     /locus_tag="VHN20_04040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724974.1"
                     /translation="LREEITITPRPVAPTISVITARPPIFTPADVTGAEPLVGKATVR
                     TTTIAQRLEQPKALEAKDYAAATRHDALHALLRLADELRSEDEGETPGLFAGINVHGL
                     ASDTFLETPEERTRRFVPLATFVTNRARLPLLLQVPDREGDESAHFSDSADLADNTVA
                     LMRQVEGRVKLYRNAILACERTRDSLRQDMAGAQARLAAWDQRLAEARHDVAVASALI
                     AEENGRLAAINARRSAVLREDVRFLAYIRPRETRNLLAAPVHRLDPGLLEAPVPACLR
                     EHADLPDELTAMLAVVREAPAAWFVGVPKLIERLDRPELLLRTVQTAQLRSQIFALRS
                     AAPVIATSVSPAAKAVALVQARQRATVLETRQLANAVDVAQLSTLTWQGAREKVQAVV
                     SLGDLMDGEHGHGEVSRRAAAAYDELGRIVACLHAEFSAVLPSIRLDWAESLSQFDVA
                     PSLRDLAVLARWPEIEFVDRRQMQGYVDWLFDQIDAREPRAVALMNDVVRMALLLAAD
                     APIGRILAGRLPRPTLARPGLRIPLTAFDPAKLRIGMQALIHSGPEVVVRAVVEDIGN
                     EISARVTHTATAEVSLGLDARVQFAETAQVSLARQSPTMTARSKTL"
     gene            1859..>2140
                     /locus_tag="VHN20_04045"
     CDS             1859..>2140
                     /locus_tag="VHN20_04045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724975.1"
                     /translation="MPALALATRQVRRLNLRAPDDTLAGRGLRLLEDALRTASLPDSP
                     ARIILVRRLALGRFSSGIAPQTLSLAIERRVAELGAAAVHAAAPEAPNAI"
BASE COUNT          316 a          768 c          735 g          321 t
ORIGIN      
        1 ctccgggagg agatcaccat cacccccaga ccggtcgcgc cgacgataag cgtgatcacg
       61 gccaggccgc ccattttcac ccccgccgac gtgacgggcg ccgagccgct cgtcggcaag
      121 gcgacggtgc gcaccaccac gatcgcgcaa cggctcgagc agccgaaggc gctcgaggcg
      181 aaagattacg cggccgcgac gcggcatgac gccctgcacg cgctgctgcg gctcgccgat
      241 gaattgcgca gcgaggatga gggcgagacg ccagggctgt tcgcgggcat caacgtgcac
      301 ggccttgcca gcgatacgtt cctcgagacc cccgaggagc gcacgcgacg cttcgtgccg
      361 ctcgccacct tcgtgacaaa tcgcgcccgc ctccctttgc tgctgcaggt ccccgaccgc
      421 gagggagacg aaagcgccca cttctccgac agcgccgatc tcgccgacaa cacggtggcg
      481 ctgatgcgtc aggtggaagg tcgggtcaag ctgtaccgca acgcgatcct cgcctgcgag
      541 cgcacgcgcg actctctgcg tcaggacatg gccggcgctc aagcgcggct cgccgcttgg
      601 gatcagcggc tggcggaggc acgccacgac gttgccgtag cgagcgcact gattgctgag
      661 gagaacggac gcctcgcggc catcaatgcg cgacgttcgg ccgtgctgcg cgaggacgtg
      721 cgcttcctcg cctatatccg gccgcgtgag acgcgcaacc ttctcgccgc gccggtgcat
      781 cgcctcgatc cgggcctcct cgaggccccg gtcccggcgt gtctgcgtga gcacgccgac
      841 ctgccggacg agctgacagc catgcttgcg gtggtgcgcg aagcgcctgc cgcgtggttc
      901 gtgggcgtgc cgaagctgat cgagcggctg gacaggcccg agctgctgct gcggacggtg
      961 cagacggcac agctgcgcag ccagatattc gcgctacgga gcgcggcacc ggtaatcgcc
     1021 acatcggtct cgccggccgc caaggccgtg gcgctcgtgc aggcccgcca gcgtgcgacg
     1081 gtgctcgaga cgcgccagct cgccaatgcc gtcgacgtgg cacagctctc aacgctgacc
     1141 tggcaaggcg cgcgcgaaaa ggtgcaggcc gtcgtctcgc ttggcgacct gatggacggc
     1201 gagcacggcc atggcgaggt ttcgcgccgt gccgccgccg cctacgacga gctcgggcgg
     1261 atcgtcgcgt gcctgcacgc ggagttctcc gccgtgctgc catcgatccg tctcgactgg
     1321 gccgaaagtc tgtcgcagtt cgacgtggcg cctagcctgc gcgacctcgc cgtgctcgca
     1381 cgctggccgg agatcgagtt cgtcgaccgg cggcagatgc agggctatgt cgactggctg
     1441 tttgatcaga tcgacgcgcg cgagccgcgc gcggtcgcgc tgatgaacga tgtcgtgcgc
     1501 atggcgctgc tgctcgcggc cgatgcgccg atcgggcgca tcctggccgg tcgcctgccg
     1561 cgcccgacgc ttgcccgtcc cggcctgcgc attcccctga cggcgttcga tcccgcgaag
     1621 ctgcgcatcg gcatgcaggc cctcatccac agcggtccgg aggtcgtcgt gcgcgcggtc
     1681 gtcgaggaca tcggcaacga gatctcggcg cgcgtcactc acaccgcgac cgccgaagtc
     1741 agcctcggcc tcgacgcgcg cgtgcagttt gccgagaccg cccaggtcag cctcgcgcgg
     1801 cagagtccga cgatgactgc ccgctcgaag acgctttgac gaaaaagagg tctgcgagat
     1861 gcccgctctc gcccttgcca cgcgacaggt ccgccgcctc aatctgcggg cgccggacga
     1921 cacgctcgcc ggtagggggt tgcggctgct cgaggacgcg ctgcgcaccg ccagcctgcc
     1981 ggattcgccg gcccggatca tcctggtccg ccgcctggcg ctggggcgct tttcgtccgg
     2041 catcgcgccg cagaccctgt cgctcgcgat cgagcggcgc gtcgccgagc ttggagcggc
     2101 ggccgtgcat gccgcggcgc cggaggcgcc aaacgcgatt
//
LOCUS       DATAIQ010000236         2570 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_104515, whole genome shotgun sequence.
ACCESSION   DATAIQ010000236 DATAIQ010000000
VERSION     DATAIQ010000236.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2570)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2570)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2570
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_104515"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..208
                     /locus_tag="VHN20_04050"
     CDS             <1..208
                     /locus_tag="VHN20_04050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724976.1"
                     /translation="AKPAAGRAAPRRRQPARQPPPKELGPPIPMPPSAIKRLEAALRE
                     LGECERILAALAPDATAAADEERG"
     gene            310..1260
                     /locus_tag="VHN20_04055"
     CDS             310..1260
                     /locus_tag="VHN20_04055"
                     /EC_number="4.1.3.3"
                     /EC_number="4.2.1.41"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018237608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009436 - glyoxylate catabolic process
                     [Evidence IEA];
                     GO_process: GO:0071704 - organic substance metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HEX2724977.1"
                     /translation="MTSIDPKLRKALTGISGILVTPFDGQDKVAPKRLKPVIDRAIGA
                     GVHILVANGNTGEFYGLTTAEAETMVRSVAEQVGGRVPLLGGVGRSIVDACALAKASR
                     AAGASALMVHQPPDPFVSPRGVIAYVQRVAEAGDGLPLMLYLRNDGIGLDTIEQLCRV
                     PGVAGVKWASPTPLRLAEAIRRSSPDIVWVGGLAEVWAPPLCAVGARGFTSGLINVWP
                     EHSVAIHAALEAGDYPKANGLIAVMLDFEEIRAQEQNGTNVTAVKAALQLMGEDCGPT
                     RPPSAWPLTEAQMARLRKLLDSWDSYRSAGAGRIRQPARA"
     gene            1408..1485
                     /locus_tag="VHN20_04060"
     tRNA            1408..1485
                     /locus_tag="VHN20_04060"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1443..1445,aa:Pro,seq:ggg)
     gene            2155..2385
                     /locus_tag="VHN20_04065"
     CDS             2155..2385
                     /locus_tag="VHN20_04065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724978.1"
                     /translation="MDSGVEAQVAMLRIILSNVVARMAGTNDDGGRAMLQEMGDQCKI
                     AAEHMSVGPERPSLVRDTQTFLDEFFKGITIT"
BASE COUNT          403 a          880 c          878 g          409 t
ORIGIN      
        1 tgccaaaccg gccgccggcc gggccgcgcc gcgccggcgt caaccggctc ggcagccgcc
       61 gcccaaggaa ctcggcccgc ccatcccgat gccgccgagc gccatcaagc ggcttgaggc
      121 cgcgctccgg gagctcggcg aatgcgagcg gattctggcc gcgctcgcgc ctgacgccac
      181 cgctgcggcg gacgaggaac gcggctgagc ggagaacggc gcgagctcgg ttgcgccgcc
      241 gctctcgtaa ccgctcccac ctcgcgacat catggtctag ggtgcggccg cctgaccacg
      301 gagttggcca tgacgtcgat cgatccgaag cttcgcaagg cgctcaccgg gatctcgggc
      361 atcctggtca cgccgttcga cgggcaggac aaggtcgcgc cgaagcggct gaagccggtc
      421 atcgaccggg cgatcggcgc cggcgtccat atcctcgtgg ccaacggcaa cacgggcgaa
      481 ttctatggcc tgacgaccgc cgaagccgag accatggtca ggtctgtcgc cgaacaggtc
      541 ggcggccgcg tgccgctcct cggcggcgtc gggcgcagca tcgtcgatgc ctgcgcgctc
      601 gccaaggcat cgcgggccgc aggggcttcg gcgctgatgg tgcatcagcc gcccgatccc
      661 ttcgtgtcgc cccgcggcgt catcgcctac gtgcagcggg ttgccgaggc aggcgacggt
      721 ctcccgctca tgctttatct gcgcaacgat ggcatcggcc tcgacaccat cgagcagctg
      781 tgccgcgtgc cgggcgtcgc tggggtcaaa tgggcatcgc cgaccccgct gcggctcgcc
      841 gaggcgatcc gccggtcgag cccggacatc gtctgggtcg gaggactggc cgaagtctgg
      901 gccccgccgc tctgcgccgt cggcgctcgt ggcttcacgt cgggcctgat caacgtctgg
      961 cccgagcatt cggtcgccat ccacgccgcc ctcgaggccg gcgattaccc gaaagccaac
     1021 ggcctcatcg ccgtgatgct cgatttcgag gagatccgcg cccaggagca gaacggcacc
     1081 aacgtgaccg ccgtgaaggc ggcgctgcag ctcatgggcg aggattgcgg cccgacccgg
     1141 ccgccctcgg cgtggccgct caccgaggcc cagatggcgc gcctgcgcaa gcttctggac
     1201 tcgtgggact cctaccggtc ggccggcgcc ggccggatcc ggcagccggc gagggcatag
     1261 cctccggcga tccgggcgcc ggcagcagcc tcggtgggac tttcggtctc acccgccccc
     1321 gacggccgtc gtcgcgtcgc gcaccggcgt caagcggggt tgcgacgctg ccggaaaaat
     1381 cctaggtagc cagggcccat tgggcgtcgg agcgtagcgc agcccggtta gcgcactagt
     1441 ctgggggact aggggtcgcg agttcgaatc tcgccgctcc gaccataatg tcactcggtt
     1501 cccgttttgc cgaacttgtt cgcggctccg gtgaccggca ggccttcaaa atcttcataa
     1561 catcgagtgg atgcaaatgc ggtgatggca cgagcccgca gcgcgggcgc gggccgcgtc
     1621 ggccaatgcg cggtgcttcc gaggggctgg ggccatgacg gtctcgctgc tcttgcaggc
     1681 ggaagcaaac gtctctcgca gctggcgccc acgggctcgg tttgctggtg atgcaggatt
     1741 aacccgcccc cctgggagaa atcgttccga gtgctttatg tgaatgcaac aaacgagcgg
     1801 gaacccgcat tgcaacgcat gcctgacaat tcccttatcg cccgtgccgc ggccgccatc
     1861 gaagaggccc gttcgctctg cgccgatcgc ggcgcgatca gagatgctgt cgaagcatcc
     1921 cgcgcgacgc tgcgcgagag cgtgatcgag agcttggtcg cgaccgaccg gagcgcgacc
     1981 gctcgtcttg tgcagcccat gccgcgcccg cagccgagca ctgctcgcac gtggcccgtt
     2041 catgctccgg ggcaggcttt cgctggatca tgatccagcc aacgcagttg tcgacgttcg
     2101 taaacgtcgc gtaagctgtt gcgcaacggt caaccaaaag gggcaagagg gataatggac
     2161 tctggcgttg aagcccaggt cgccatgctg cgcatcattc tcagcaacgt cgtcgcgcga
     2221 atggccggaa ccaatgacga tggcggtcgc gcgatgctgc aggagatggg cgatcagtgc
     2281 aagatcgccg ccgagcacat gagcgtcggc ccggagcgtc cgtccctggt gcgggatacg
     2341 cagacctttc tggacgagtt cttcaagggc atcacgatca cctgacggcg ggcgcgagca
     2401 ccggggctgc ggcgcgtatc cgcagttcgc gacgggttcg ccgcctgctc caggcggggg
     2461 tcggccgcgg cgcctcgcga gcatgcctcg ggccaagcgc aagcctccgc tcgcgacgag
     2521 cttgttgccc gcggtgcatg ctgtgataag ccgccgagca ttgggacttc
//
LOCUS       DATAIQ010000237         2446 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_427422, whole genome shotgun sequence.
ACCESSION   DATAIQ010000237 DATAIQ010000000
VERSION     DATAIQ010000237.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2446)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2446)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2446
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_427422"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..345
                     /locus_tag="VHN20_04070"
     CDS             <1..345
                     /locus_tag="VHN20_04070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017485713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase domain-containing
                     protein"
                     /protein_id="HEX2724979.1"
                     /translation="EKIYKRFMDPDAGGGPPDTSAIRAARSNIRYHLDYIGYLMAGRN
                     WLAGDHLTYADLAAAAHLSCVDYLGDVPWNENEAAKAWYARLKSRPAFRPLLADRMPG
                     IAPAGQYENLDF"
     gene            342..1469
                     /gene="queG"
                     /locus_tag="VHN20_04075"
     CDS             342..1469
                     /gene="queG"
                     /locus_tag="VHN20_04075"
                     /EC_number="1.17.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015951009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0052693 - epoxyqueuosine reductase
                     activity [Evidence IEA];
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA epoxyqueuosine(34) reductase QueG"
                     /protein_id="HEX2724980.1"
                     /translation="MSGATLKAALVARAHGLGFDVVRVTTPEAMPDAGQRLASWLAAG
                     HHGSMDWMAAAPARRADPKSLWPELRSIVMVGVNYGPADDPLASLAATDRGTISVYAR
                     ARDYHDVIKGKLKELAGFVAARGAADVKVFVDTAPVMEKPLAEAAGLGWQGKHTVLVS
                     REFGNWLFLGSVFTTAELPADAPEVDHCGSCRRCLDICPTDAFPGPYQLDARRCISYL
                     TIEHKGHIAPELRPGIGNRIFGCDDCLAVCPWNKFAQVGREARLAQRDDLAAPPLAEL
                     ARLDDAAFRARFAGTPVKRTGRDRFVRNILIAIGNSRRPELAAEAVRLLDDPSSLVRA
                     MAVWALRQLAPPADFETLRAAKAGAEADADVRAEWRAGAAS"
     gene            1477..2415
                     /locus_tag="VHN20_04080"
     CDS             1477..2415
                     /locus_tag="VHN20_04080"
                     /EC_number="1.1.1.290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009734551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX2724981.1"
                     /translation="MTPRRITDAARPKLFVFGLGYSAVHFARACRDRFLRIAGTVTSA
                     GKAHALAREGIAAHVFAPGQADAGLEDEIASADILLVSIPPDETGDPVLARFAAQIAA
                     APRLSWIGYLSTIGVYGDHGGGWVDEATPPNPRSERSRERLDAENAWRELGARSGKAV
                     HVFRIAGIYGPGRNALRQLADGTARRIVKSGQVFNRIHVDDIAAVLMASVDRPRAGAI
                     YNLADDEPAPAPDVIAYAAGLVGVPPPPETPFEQANLGPLAASFYAESKRARNRLIKD
                     ELGVRLRHPTYRDGLRALRAAGEGPSPAPARGQASG"
BASE COUNT          347 a          855 c          863 g          381 t
ORIGIN      
        1 gaaaagatct acaagcgctt catggacccc gatgcgggcg gcggcccgcc cgatacgagc
       61 gccatccgcg cggcgcgcag caatatccgt taccacctgg actatatcgg ctatctgatg
      121 gctggccgga actggcttgc cggcgatcat ctgacctatg cggatctggc ggcggcggcc
      181 catctgtcct gcgtggatta tctcggcgac gtgccatgga acgaaaacga agcggcgaaa
      241 gcctggtatg cgcggctgaa gtcgcggccg gcgtttcgcc cgctcctcgc cgaccgcatg
      301 ccggggatcg cgccggcggg gcagtacgag aacctcgatt tctgagcggc gccacgctca
      361 aggcggcgct cgtcgcccgc gcgcacgggc tcggcttcga cgtcgttcgg gtgacgacgc
      421 cggaggccat gccggacgcc gggcagcgcc tcgcctcctg gctcgccgca ggtcaccacg
      481 gctcgatgga ctggatggcg gcggcgccgg cacgccgggc cgatccgaag tcgctgtggc
      541 cggagctgcg cagcatcgtc atggtcgggg tcaattacgg cccggcagac gatccgctgg
      601 catcgcttgc tgcgacggat cgcggcacga tctccgttta tgcgcgagcc cgcgactacc
      661 atgacgtgat caagggcaag ctcaaggaac tggccgggtt cgtggcggcg cgcggcgccg
      721 cggacgtcaa ggtgttcgtc gacacggcgc ccgtgatgga gaagccgctg gcggaagcgg
      781 ccggcctcgg ctggcagggc aagcacaccg tgctggtgtc gcgcgaattc ggcaactggc
      841 tgtttctcgg cagcgtcttc acgaccgccg agttgcccgc ggacgcgccc gaggtggacc
      901 attgcggctc gtgccgtcga tgcctcgaca tctgtccgac cgacgcgttc ccgggccctt
      961 atcagctcga tgcgcgccgc tgcatttcct atctgacgat cgagcacaag ggccacatcg
     1021 cgccggagct gcggcccggc atcggcaacc gcatcttcgg ctgcgacgat tgcctggcgg
     1081 tgtgcccctg gaacaagttc gcgcaggtcg ggcgcgaggc gcgccttgcg cagcgcgatg
     1141 atcttgccgc gccgcccctg gccgagcttg cccgcctcga tgacgccgcc ttccgcgccc
     1201 gctttgccgg caccccggtc aagcgcaccg ggcgcgaccg cttcgtgcgc aacatcctga
     1261 ttgcgatcgg caactcgcgc cggccggagc tcgccgccga agccgtgcgg cttctcgacg
     1321 atccctcgtc gctggtgcgc gccatggcgg tgtgggcgct gcggcagctc gcccctccgg
     1381 cggacttcga gacgctgcgc gccgcgaagg ccggcgcgga agcggacgcg gatgtgcgtg
     1441 ccgagtggcg cgcgggcgct gcctcgtgag cccgcgatga cgccacgccg catcactgac
     1501 gcggctcgcc cgaagctgtt cgttttcggc ctcggctaca gcgccgtgca ttttgcgcgc
     1561 gcctgtcgcg atcgcttcct gcgcatcgcc ggcacggtca cgtcggcggg caaggcgcac
     1621 gcgctcgcgc gcgaaggcat cgccgcgcat gtcttcgcgc cgggtcaggc agacgcgggt
     1681 cttgaggacg agatcgcaag cgccgacatt ctgctcgtct ccatcccgcc ggacgagacg
     1741 ggggatccgg tcctcgcccg tttcgcggca cagatcgcgg cggcgccgcg actgtcctgg
     1801 atcggttatc tgtcgacgat cggcgtctat ggcgatcatg gcggcggctg ggtggacgag
     1861 gcaacgccgc cgaacccgcg cagcgagcgc tcgcgcgaac ggctcgatgc ggagaatgcg
     1921 tggcgcgagc tcggcgcgcg ctcgggcaag gcggtccacg tgttccgcat cgccggcatc
     1981 tacgggccgg gacggaacgc gctgagacag cttgccgacg gcaccgcccg gcgcatcgtc
     2041 aagagcgggc aggtcttcaa ccgcattcac gtcgacgaca tcgctgccgt gctgatggcg
     2101 tcggtagatc ggccgcgcgc cggcgcgatc tacaacctcg cggacgacga gccggctccg
     2161 gcgcccgacg tgatcgccta tgcggccggc ctcgtcggcg tgccgccgcc gcccgagaca
     2221 ccgttcgagc aggcaaatct gggccctctg gcggcgagct tttacgccga aagcaagcgc
     2281 gcgcgtaacc ggctgatcaa ggacgagctg ggggtgcgcc tgcgccaccc gacctatcgc
     2341 gacgggctgc gcgccttgcg cgctgccggc gaggggccat ctcccgctcc cgcccgcggg
     2401 caagcgtcgg ggtgagggag agtgacctca cgcggtcgct tcgtag
//
LOCUS       DATAIQ010000238         1801 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_381444, whole genome shotgun sequence.
ACCESSION   DATAIQ010000238 DATAIQ010000000
VERSION     DATAIQ010000238.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1801)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1801)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1801
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_381444"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(89..733)
                     /locus_tag="VHN20_04085"
     CDS             complement(89..733)
                     /locus_tag="VHN20_04085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724982.1"
                     /translation="MAVLFAAGSICFFVGPFPGYIDLVGPKADSVTFFVGSILFTAGG
                     ALQTSLAFPERRSSGAGRAAWWTATIQTCGTLFFNVTTFQAMHTELSNPNYDRLVWRP
                     DALGSVCFLVSGLIAYHASARHGWLPARRGTGWWEPAVNLLGCFFFGISAVAGYVVPS
                     TGSILDLAAANWNTAVGAACFLACALATLRTGHTSKSPRLRRLHEWEHDVRQII"
     gene            945..1391
                     /locus_tag="VHN20_04090"
     CDS             945..1391
                     /locus_tag="VHN20_04090"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HEX2724983.1"
                     /translation="MHDVAAFLRAHPPFNSLDDETLARVAESAEIEFFAARSPILANA
                     DAVAECGYVVRCGSVELLIDGRLLDLAGEGEVFGFASIVSGDPLGFVARAAEDTLVYR
                     IPADEMRALLQRPNILRFITQVEHQVAQLRAGEQPDNLSSPKASCR"
     gene            1480..>1801
                     /locus_tag="VHN20_04095"
     CDS             1480..>1801
                     /locus_tag="VHN20_04095"
                     /inference="COORDINATES: protein motif:HMM:NF013122.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004527 - exonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exonuclease domain-containing protein"
                     /protein_id="HEX2724984.1"
                     /translation="MRRSPGWRNARFIAIDIETTGLDRRRDEVISFAGIPIEAGRIII
                     SQAVHGLVRPRAASTGASAEVHGLRDDDLAGAETAPDALAPLAALIHGRIPVVHVQWV
                     ERTFL"
BASE COUNT          324 a          599 c          599 g          279 t
ORIGIN      
        1 tcacatgttg ggccaccagc agccacggct catacccgtt tccgtggttt tgaccagcat
       61 cacccgattc gggatgaggc ccggcggatc agatgatctg cctcacgtcg tgctcccact
      121 cgtggagccg gcgaagcctc ggcgacttcg acgtgtgccc ggtgcgcagc gtggcaaggg
      181 cgcaggcgag gaagcatgcc gcgcccacag cggtgttcca gttcgcagcg gcaaggtcga
      241 ggatcgatcc ggttgagggg acgacgtagc cggcgacggc cgaaatgccg aagaagaagc
      301 acccgagcag gttgacggcc ggctcccacc atccggtacc tcgacgcgcc ggcagccagc
      361 cgtgacgggc cgatgcgtgg taggcgatca accccgagac gagaaagcag acggagccca
      421 gcgcatccgg tcgccacacg agcctgtcgt agttcgggtt cgacagctcg gtgtgcatcg
      481 cctgaaaggt cgtcacgttg aagaacagcg tgccgcaggt ttggatcgtt gccgtccacc
      541 acgctgcccg cccagcgccc gacgaccggc gctcgggaaa cgcgagcgat gtctgaagcg
      601 ccccaccggc ggtgaacagg atggagccga cgaagaacgt gactgagtcg gccttcggcc
      661 cgacgaggtc gatgtagccg ggaaagggac cgacgaagaa gcaaatggac ccggcggcaa
      721 agagaaccgc catccagcgc tcacggctca tggccttcca ttattcgcga tgcggctgcc
      781 ttcacccccc gcctcacggc caagcgcgcc cgtcaggatt cgcccgctga gaatcgctga
      841 cccgcacgga ccgccgcgcg ggggcccatc gtgtgccgcg gtagcgccca ggacgccacc
      901 gacccacacg agaaggccct atgccatagc gtggatacga gtcaatgcat gacgtagccg
      961 cgttcctgcg cgcgcatccg ccattcaaca gcctcgacga tgagacgctg gcccgtgtgg
     1021 ccgagagcgc cgagatcgag ttcttcgccg cccgtagccc gatattggca aacgccgatg
     1081 ctgtcgcgga gtgcggctac gtcgtcaggt gcggatcggt cgaactcctc atcgacggcc
     1141 ggctgctcga cctcgccggc gagggcgaag tgtttgggtt cgcgtccatc gtgtccgggg
     1201 atccactcgg cttcgtcgcg cgcgcggcgg aggacacgct ggtctaccgc ataccagccg
     1261 acgagatgcg cgcgctgctg cagcggccaa acatcctgcg gttcataacc caagtggagc
     1321 accaggttgc acagctgcgg gcaggtgagc agcccgacaa cctgtcgagc ccgaaagcct
     1381 catgccggtg actcggaccg cgctcaagga ggcgttcagc gccgttgccg gtattcagcc
     1441 agcgatcggg gcaagactcg gcctccgggc gcgttgaccg tgcgccgcag cccggggtgg
     1501 cgcaacgcgc ggttcattgc gatcgacatc gagaccacgg ggctcgaccg gcggcgcgac
     1561 gaggtgatct cgttcgcggg tattccgatc gaggctgggc ggatcatcat ctcgcaagca
     1621 gttcacggtc tcgtgcgtcc tcgcgccgcc tccacgggcg cctccgccga ggtccacggg
     1681 ctgcgcgacg acgacctcgc tggcgcggag acagcgcctg atgcgcttgc accgttggca
     1741 gcgctcatac acgggcgcat tccggtggtg catgtccaat gggtggaacg cacatttctt
     1801 c
//
LOCUS       DATAIQ010000239         3836 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_427678, whole genome shotgun sequence.
ACCESSION   DATAIQ010000239 DATAIQ010000000
VERSION     DATAIQ010000239.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3836)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3836)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3836
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_427678"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..3379)
                     /gene="gltB"
                     /locus_tag="VHN20_04100"
     CDS             complement(<1..3379)
                     /gene="gltB"
                     /locus_tag="VHN20_04100"
                     /EC_number="1.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006726907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0015930 - glutamate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0006537 - glutamate biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase large subunit"
                     /protein_id="HEX2724985.1"
                     /translation="MTKPASEKPERPTGTAADSKRPAPDDLRKRTGKAVSSKTPDGRL
                     AVRDPGLPEKQGLYDPKNEKDACGVGFVVDMKNRRSHAIVEQGLSILRNLDHRGAVGA
                     DPKMGDGCGILVQVPHRFFAEECAAQGITLPEPGHYGVGHLFMPPDEAGHALVVEVVE
                     KAIADEGLVLLGWRDVPVDNSDLGDAVKATEPVHKQIFIGRPESIVDEDTFERRLFLV
                     RKVISNAVYNREDPRTKGYYPVSLSCRTIVYKGMVLVTQIGGYYKDLQDPRFESALAL
                     VHQRFATNTFPTWQLAHPYRMVAHNGEINTLRGNVNWMAARQASTSSDLFGGDISKLW
                     PISYEGQSDTACFDNALEFLVRGGYPLAHAMMMLIPEAWAGNPLMDEDRRAFYEYHAA
                     LMEPWDGPAAIAFSNGRQIGATLDRNGLRPARYLVTEDGLVVMASEMGVLPIPEEKII
                     EKWRLQPGKMLLIDLEQGRIIADEEIKRELNLANPYKDWLGRTQIVLEELRPVQARES
                     RTDVSLLDRQQAFGYTQEDLRLLMQPMAITGQEAVGSMGTDTPISALSDKAKLLYTYF
                     KQNFAQVTNPPIDPIREELVMSLVSFIGPRPNILDLEGTSRRKRLEVRQPILTNEDLE
                     KIRCIGHVEDSFDTKTLDITYPVERGAAGMDEALDRLCDRAEAAVKGGYNIIVLSDRA
                     IGPDRIAIPALLATAAVHNYLIRKGLRTSVGLVVESGEPREVHHFACLAGYGAEAINP
                     YLAFDTLLAMQDELPAEVDPEEVVHRYIKSIDKGLLKVMSKMGISTYQSYCGAQIFDA
                     VGLKSSFVNRDFFGTATTIEGVGMEEIAEETVQRHRDAFGDAPVYRNALDVGGEYLYR
                     LRGEQHVWNPDTVAALQHSVRLHSHDRYREFARLVNEQENHLKTLRGLFRIKTAREAG
                     RAPVPLDEVEPAKEIVKRFATGAMSFGSISKEAHETLALAMNAIGGKSNTGEGGEEPE
                     RFRPLPDGRSKRSAIKQVASGRFGVTTEYLVNSDVMQIKIAQGAKPGEGGQLPGHKVD
                     AKIARVRHSTPGVALISPPPHHDIYSIEDLAQLIFDLKNVNPRADVSVKLVAEVGVGT
                     VAAGVAKARADHITIAGYDGGTGASPLTSIKHAGSPRS"
BASE COUNT          587 a         1218 c         1333 g          698 t
ORIGIN      
        1 ccgatctcgg gctgccggcg tgcttgatcg aggtaagcgg cgaggcgccg gtgccgccgt
       61 catagccggc gatcgtgatg tggtcggcgc gcgccttggc gacgcccgcc gcgacggtgc
      121 cgacgccgac ctccgcgacc agcttcacgg agacgtcggc gcgcggattc acgttcttca
      181 ggtcgaagat gagctgcgcc aagtcctcga tcgaataaat gtcgtgatgc ggcggcggcg
      241 agatcagggc gacgccgggc gtcgagtgac gcacgcgcgc gatcttggcg tcgaccttgt
      301 ggcccggcag ctggccgcct tcgccgggct tggcgccctg tgcgatcttg atctgcatca
      361 cgtcggagtt gacgaggtat tcggtcgtca cgccgaaacg gccggaggcg acctgcttga
      421 tcgccgaacg cttggagcgc ccgtccggca gcggccggaa gcgctcgggc tcctcgccgc
      481 cttcgccggt attcgacttg cccccgatcg cgttcatggc cagcgcgagc gtctcgtggg
      541 cttccttcga gatcgagccg aaggacatgg cgcccgtggc gaagcgcttg acgatctcct
      601 tggccggctc gacctcgtcc agcggaaccg gcgcgcggcc agcctcccgg gcggtcttga
      661 tgcggaacag gccgcgcagc gtcttcaggt ggttttcctg ctcgttcacg agccgcgcga
      721 actcgcggta gcggtcgtgg ctgtgcaggc gcaccgaatg ctgaagcgcc gcgaccgtgt
      781 cggggttcca cacgtgctgc tcgccgcgca ggcgataaag atactcgccg ccgacgtcga
      841 gggcgttgcg gtagaccggc gcgtcgccga aggcgtcgcg gtggcgctgc acggtctcct
      901 cggcgatctc ctccatgccg acgccttcga tcgtcgtcgc cgtgccgaag aagtcgcggt
      961 tgacgaagct cgacttgagg ccgactgcgt cgaagatctg cgccccgcaa taggactggt
     1021 aagtggagat gcccatcttg gacatcacct tgagcaggcc cttgtcgatc gacttgatgt
     1081 agcggtggac gacctcctcg ggatcgacct cggctggcag ttcgtcctgc atggcgagca
     1141 gcgtgtcgaa ggcgagatac ggattgatcg cctcggcgcc gtagccggca aggcaggcga
     1201 agtggtgcac ctcgcgcggt tcgcccgact cgaccacgag cccgacggac gtgcgcaggc
     1261 ccttgcggat caggtagttg tggacggccg ccgtggcgag cagcgccggg atggcgatgc
     1321 ggtccggccc gatggcgcgg tccgacagca cgataatgtt gtagccgccc ttgacggccg
     1381 cctcggcgcg gtcgcacagg cggtcgaggg cctcgtccat gccggcggct ccgcgctcga
     1441 ccggataggt gatgtcgagc gtcttggtgt cgaaggaatc ctcgacgtgg ccgatgcagc
     1501 ggatcttctc caggtcttcg ttggtcagga tcggctggcg cacctcgagg cgcttgcgcc
     1561 gcgacgtgcc ttcgaggtcg aggatgttcg gccgcgggcc gatgaatgag acgaggctca
     1621 tgacgagctc ctcgcggatc ggatcgatcg gcgggttcgt cacctgcgcg aaattctgct
     1681 tgaaataggt gtagagcagc ttcgccttgt cggacaaagc cgagatcggc gtgtcggtac
     1741 ccatcgaccc gacagcttcc tggccggtga tagccatcgg ctgcatcagg agccgcaggt
     1801 cctcctgcgt gtagccgaag gcctgctggc gatcgagaag cgacacgtcg gtgcgcgact
     1861 cgcgcgcctg gaccgggcgc aactcctcga gcacgatctg cgtgcggccg agccagtcct
     1921 tgtagggatt ggccaggttc agctcgcgct tgatctcctc gtcggcgatg atgcggccct
     1981 gctcgagatc gatcagcagc atcttgcccg gctgcaggcg ccacttctcg atgatctttt
     2041 cctcggggat cggcagcacg cccatctcgg acgccatcac cacgaggccg tcttcggtga
     2101 cgagatagcg ggccgggcgc aggccgttgc ggtcgagcgt agcgccgatc tggcggccgt
     2161 tcgagaacgc gatcgcggcg ggaccgtccc acggctccat gagggcggca tggtattcgt
     2221 agaaggcgcg ccgatcctcg tccatgagcg ggttgccggc ccaggcctcg gggatcagca
     2281 tcatcatggc gtgggcgagc ggatagccgc cgcgcaccag gaactcgagc gcgttgtcga
     2341 aacaggccgt gtccgactgc ccctcgtagg aaatcggcca gagcttggag atgtcgccgc
     2401 cgaacaggtc gctgctggtc gaggcctgcc gcgccgccat ccagttgacg ttgccgcgca
     2461 gcgtgttgat ctcgccgtta tgcgcgacca tgcggtaggg atgcgccagc tgccaggtcg
     2521 ggaaggtgtt ggtcgcaaag cgctggtgca cgagcgccag ggcgctctcg aagcgcgggt
     2581 cctgcagatc cttgtagtag ccgccgatct gcgtcaccag caccatgccc ttgtagacga
     2641 tcgtgcggca cgacagcgaa accgggtaat agcccttggt gcgcggatcc tcgcggttgt
     2701 agaccgcgtt cgagatgacc ttgcggacga gaaagagccg ccgctcgaac gtgtcctcgt
     2761 cgacgatcga ctcgggacgg ccgatgaaga tctgcttgtg aacgggctcg gtggccttga
     2821 cggcatcgcc gagatcgctg ttatcgaccg gaacgtcgcg ccagccgagc aggacgaggc
     2881 cttcgtcggc gatggccttc tctacgacct cgacgacaag cgcgtggccg gcttcgtcgg
     2941 gcggcatgaa cagatggccg acgccgtagt ggccgggctc gggcaaggtg atgccctgag
     3001 cggcgcattc ctcggcaaag aagcgatgcg gaacctgcac gaggatgccg cagccgtcgc
     3061 ccatcttcgg gtcggcgccc acggcgccgc gatggtcgag gtttcgcagg atgctgaggc
     3121 cctgctcgac gatggcgtgc gaccggcggt tcttcatgtc gaccacgaag ccgacgccgc
     3181 aggcgtcctt ctcattcttc gggtcgtaga gcccctgctt ctcgggcagg cccggatcgc
     3241 gcacggcgag gcgcccgtcg ggcgtcttcg acgacacggc cttgccggtc cgcttgcgca
     3301 gatcgtctgg cgccggacgc ttcgagtcgg cagccgttcc cgtgggacgc tccggcttct
     3361 cgctcgcagg cttagtcatg ggtcatcctc gcgtcggaga cacgttgcca actctcggcg
     3421 gttcagggag tccggacggt gatggccggc gcccgccgct tcttgtcttg gaggtcggcc
     3481 gcttgtcgtg agcgcccgca cctcgcgggc gtctcgcagg ctaactcagc cggcgtgcgc
     3541 ccgttccgcc cgcgcgtcgc gggcggtcgg tttgaaatct cgtttggtcg tcgtgggacg
     3601 agccaccgcg cacctcaaag ccatcatccg tgagtcggat gggacagtat cactgtccta
     3661 atgctgcgga cgttgccaga atttcgcatg aggcacaaga ggccgagctt gcgaatcggg
     3721 agttttcttg cagccagaac aaggtaaagc ggcaacacca tggcggggcc gccgcggcat
     3781 ggtttccgag gtcattgtcc gggtctgccg gggacgcgat ccaggcaggc tttttg
//
LOCUS       DATAIQ010000240         1723 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_381542, whole genome shotgun sequence.
ACCESSION   DATAIQ010000240 DATAIQ010000000
VERSION     DATAIQ010000240.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1723)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1723)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1723
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_381542"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..283)
                     /locus_tag="VHN20_04105"
     CDS             complement(<1..283)
                     /locus_tag="VHN20_04105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724986.1"
                     /translation="MEHKPLAELQAVADVEFIGPVTTMTRERRLSRWIELLEGDAERK
                     LRSLHEIEFLSRAQRRQCRADNSPLTVAYEDPLLRAAGLRGDRVGDCTDF"
     gene            725..>1723
                     /locus_tag="VHN20_04110"
     CDS             725..>1723
                     /locus_tag="VHN20_04110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007759612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF808 domain-containing protein"
                     /protein_id="HEX2724987.1"
                     /translation="MSIGLVALLDDVAGLAKMAAASIDDVAAQAAKAGAKAAGVVIDD
                     AAVTPRYVVGFAAARELPIIGKIALGSLRNKFLVLLPAALALSLFAPSLITPLLMLGG
                     AYLCYEGTEKLYEALVPHRAHAHEAKLGSVAPNARTLEDEKVASAIKTDFILSAEIMA
                     ITLAAVPDGSLLSQAAILAVVGVGITLVVYGSVALIVKADDVGVALASTSAKGVLGAL
                     ARAFGRALVKGMPILLKLLGIVGTAAMIWVGGGIIVHGLEQYGVSLPARLIHDAAEVA
                     AHASPAPVAGLAEWAITALGSGAVGLFVGAALIPATEFVLAPFWKALASRFAARPAA"
BASE COUNT          274 a          557 c          563 g          329 t
ORIGIN      
        1 agaaatccgt gcagtctccg acccggtcgc ctctcaatcc ggccgcgcgc agaagggggt
       61 cctcgtaggc gacggtcaga ggtgaattgt cggcccggca ctgccgccgc tgcgcccgcg
      121 acaggaactc gatctcatgc agggagcgca gcttgcgctc cgcgtcgcct tcaagcagct
      181 cgatccagcg cgagaggcgc cgttcgcggg tcattgtcgt cacgggcccg atgaattcga
      241 cgtccgcgac tgcttgcaat tcggcaagtg gcttgtgctc catgatcctt ctcctttgag
      301 aagacgttgc gggagccccc acacgaggaa cgcttgacgc gacagcgctt agaacgggaa
      361 ggggctctcg aaacagggaa tgcaagcccg cttgcccgtc ctggtcgccg ccggcttcat
      421 gccgggtgtc agcatcaatt cggaagacgc aactgcggtt cccgaaacat gctctttcca
      481 agccggcggt gacggcgcga tcaattgggc ctcccagctc cgggagagac ccatgctgcc
      541 gatgcactat gcactagtct tcggacaagc tccaccgcca ccttcgcgtt cttatatcac
      601 catcgtcacc agtggtatgc gcatgatagg cgttacccag gattcggctg ccacgagcga
      661 ggcatgtgcg aactccgcgg cccgcaagcc gttgcgttca gatcgaaact gcaggagtcc
      721 ggatgtgagc atcggccttg tcgcgcttct tgacgatgtc gcggggctgg ccaagatggc
      781 ggccgcctcg atcgatgacg tggccgcgca ggctgccaag gccggcgcca aggctgcagg
      841 cgtcgtgatc gacgatgccg cggtgacgcc gcgttacgtc gtgggctttg ccgccgcccg
      901 tgagctgccc atcatcggca agatcgcgct tggatcgctg cgcaacaagt tcctcgtcct
      961 gctgcccgcc gccctggcgc tcagcctgtt cgcgccctcg ctgatcacgc cgctcctgat
     1021 gctgggcggg gcctacctct gctatgaagg cacggaaaag ctctatgagg ccctcgtgcc
     1081 gcaccgggcg cacgctcacg aggcgaaact cggctccgtc gcgcctaatg cgcggacgct
     1141 cgaggacgag aaggtggcga gcgccatcaa gacggatttc attctctcgg cggagatcat
     1201 ggcgatcacg cttgctgccg ttccggacgg aagcttactc agccaggcgg ccatcttggc
     1261 ggttgtcgga gtcggcatca cgctggtggt gtacggcagc gtggccttga tcgtgaaggc
     1321 cgatgacgtc ggggtggcgc ttgcctcaac gagcgcaaag ggcgtgctcg gcgcgctggc
     1381 gcgcgctttt ggacgtgccc tggtcaaggg gatgccaatc cttctcaagc ttctcgggat
     1441 cgtcggcacg gccgcaatga tttgggtggg aggcggcatc atcgtacatg gcctcgagca
     1501 atatggcgtg tccttgccgg ctcgattgat ccatgacgct gccgaggtcg ctgcgcacgc
     1561 cagccccgcg ccggtcgcgg gacttgctga atgggccatc acggccctcg gctccggtgc
     1621 cgtcgggttg ttcgtcgggg cggcgctgat cccggcaacc gagttcgtgc ttgctccgtt
     1681 ctggaaggcg ttggcgtccc gcttcgccgc ccgcccggcg gcc
//
LOCUS       DATAIQ010000241         3501 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_104829, whole genome shotgun sequence.
ACCESSION   DATAIQ010000241 DATAIQ010000000
VERSION     DATAIQ010000241.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3501)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3501)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3501
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_104829"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..702
                     /locus_tag="VHN20_04115"
     CDS             <1..702
                     /locus_tag="VHN20_04115"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012561767.1"
                     /note="produces ATP from ADP in the presence of a proton
                     gradient across the membrane; the alpha chain is a
                     catalytic subunit; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HEX2724988.1"
                     /translation="AYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDDNGSGS
                     LTALPVIETQANDVSAYIPTNVISITDGQIFLETDLFYQGIRPAVNVGLSVSRVGSAA
                     QTKAMKKVAGRIKGELAQYREMAAFAQFGSDLDAATQRLLNRGARLTELLKQPQFSPL
                     KMEEQVVVIYAGVNGYLDPLPVNRVRAFEDGLLGHVRSRHADLLETIRTSGDLSDDSA
                     AKLKGAVESFAKSFA"
     gene            710..1582
                     /locus_tag="VHN20_04120"
     CDS             710..1582
                     /locus_tag="VHN20_04120"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012336266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HEX2724989.1"
                     /translation="MPSLKELRNRIASVKATQKITKAMQMVAAAKLRRAQMAAEAARP
                     FAERMNQVLSNIAGTITPGPESPRLLAGTGADRVHLLVVCTAERGLCGAFNSSIARLA
                     RDHANRLLAEGKSVRIICVGKKGYDILRRQFGELIIDFVDLRGARTLGFEHADMVAQK
                     ILQRFEAGEFDVATLFYSRFKSVISQIPTAQQIIPAVFEANGGASEAVYDYEPGENEI
                     LEELLPRNVTVQVFRALLENAASEQGARMSAMDSATRNAGDMIKKQTLTYNRTRQAMI
                     TKELIEIISGAEAL"
     gene            1622..3085
                     /gene="atpD"
                     /locus_tag="VHN20_04125"
     CDS             1622..3085
                     /gene="atpD"
                     /locus_tag="VHN20_04125"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007009218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HEX2724990.1"
                     /translation="MTQSKSAQQRAGANTVGQITQVIGAVVDVRFDGHLPEILNALET
                     DNQGNRLVLEVAQQLGESTVRCVAMDTSEGLVRGQDVRDTGAPIAVPVGDSTLGRIMN
                     VIGEPVDEAGPIPSQARRAIHQPAPEYTEQSTEAQILVTGIKVVDLLAPYARGGKIGL
                     FGGAGVGKTVIIMELINNIAKAHGGYSVFAGVGERTREGNDLYHEMIESGVNKDPHSG
                     STAGSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDQGQDVLFFVDNIFRFTQAGSE
                     VSALLGRIPSAVGYQPTLATDMGALQERITTTTKGSITSVQAIYVPADDLTDPAPATS
                     FAHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLSPAIVGEEHYQVARQVQQVLQRYKA
                     LQDIIAILGMDELSEEDKVAVARARKIERFLSQPFHVAEVFTGTPGVFVSLEDTIKSF
                     KGLVEGKYDHLPEPAFYMVGTIEQAVEKAQRLAAEAA"
     gene            3085..3486
                     /gene="atpC"
                     /locus_tag="VHN20_04130"
     CDS             3085..3486
                     /gene="atpC"
                     /locus_tag="VHN20_04130"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018263204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F1 subunit epsilon"
                     /protein_id="HEX2724991.1"
                     /translation="MATFHFELVAPERVLYSGEVDAVMLPGTEGDMTVLPGHAPVMTS
                     LKTGFVVVTDRQNHGTRVLVRGGFAEINADAVIVLAERALDQGELTPDSIDREILQVE
                     MQRDASHDPAFKDAADATIVQLQEARAALRY"
BASE COUNT          613 a         1250 c         1141 g          497 t
ORIGIN      
        1 gcctaccgcc agatgtcgct cttgctgcgc cgcccgccgg gccgcgaagc ctatccgggc
       61 gacgtgttct acctgcattc gcgcctgctc gagcgcgccg ccaagatgaa cgacgacaac
      121 ggctccggct cgctgaccgc gctgccggtg atcgagacgc aggccaacga cgtgtcggcc
      181 tacatcccga ccaacgtgat ctcgatcacc gacggccaga tcttcctcga gaccgacctg
      241 ttctaccagg gcatccgtcc ggccgtgaac gtcggcctgt cggtgtcgcg cgtcggctcc
      301 gccgcgcaga ccaaggcgat gaagaaggtc gccgggcgca tcaagggcga gctcgcgcag
      361 tatcgcgaga tggccgcctt cgcgcagttc ggctccgacc tcgacgcggc gacgcagcgc
      421 ctgctcaacc gcggcgcccg cctgaccgag ctcctcaagc agccgcaatt ctcgccgctc
      481 aagatggagg agcaggtcgt cgtgatctat gccggcgtca acggctatct cgacccgctg
      541 ccggtcaacc gcgtgcgcgc cttcgaggac ggcctgctcg ggcatgtccg ctcgcgccac
      601 gccgatctcc tcgagacgat ccgcacctcg ggcgacctgt cggacgacag cgcggccaag
      661 ctcaagggcg cggtcgaaag cttcgccaag tcgttcgcgt gatgctcgca tgccttcgct
      721 aaaggagctg cgcaaccgca tcgcctcggt caaggcgacc cagaagatca ccaaggccat
      781 gcagatggtg gccgcggcga agctgcgccg cgcgcagatg gcggccgagg cggcgcggcc
      841 gttcgccgaa cgcatgaacc aggtgctcag caacatcgcc ggcacgatca cgcccggccc
      901 ggaatcgccg cgcctgctcg ccggcaccgg cgccgaccgc gtgcacctgc tcgtcgtgtg
      961 cacggccgag cgcggcctgt gcggcgcctt caactcgtcg atcgcgcgcc tcgcgcgcga
     1021 tcacgccaac cgcctgttgg cggaaggcaa gagcgtcagg atcatctgcg tcggcaagaa
     1081 gggttacgac atcctgcgcc ggcaattcgg cgagctgatc atcgacttcg tcgacctgcg
     1141 cggcgcgcgc acgctcggct tcgagcatgc cgacatggtg gcgcagaaga tcctgcagcg
     1201 cttcgaggcc ggcgagttcg acgtggcgac gctgttctac tcgcgcttca agtcggtgat
     1261 ctcgcagatc ccgaccgcgc agcagatcat cccggccgtg ttcgaggcga atggcggcgc
     1321 gagcgaagcg gtctacgact acgagcccgg cgagaacgag atcctcgagg agctgctgcc
     1381 gcgcaacgtc acggtgcagg tgttccgggc gctgctcgag aacgccgcct ccgagcaggg
     1441 cgcgcgcatg agcgccatgg acagcgccac gcgcaacgcc ggcgacatga tcaagaagca
     1501 gacgctgacc tacaaccgga cgcgtcaggc gatgatcacc aaggaactga tcgaaatcat
     1561 ttcgggcgcc gaggcgctct gacgacacaa gcataacgag gacacaatgg ccgaactgac
     1621 gatgacccaa tcgaaaagcg cgcagcagcg ggccggcgcc aacaccgtgg gccagatcac
     1681 gcaagtcatc ggcgctgtcg tcgacgtgcg gttcgacggc cacctgccgg aaattctcaa
     1741 cgcgctcgag accgacaacc agggcaaccg cctcgtgctc gaggtggcgc agcagctcgg
     1801 cgagtcgacc gtgcgctgcg tcgccatgga cacctccgag ggcctcgtgc gcggccagga
     1861 cgtgcgcgac accggcgccc cgatcgccgt gccggtcggc gacagcacgc tcggccgcat
     1921 catgaacgtg atcggcgagc cggtcgacga ggccgggccg atcccgtcgc aggcgcgccg
     1981 cgccatccac cagccggcgc ccgaatacac ggagcagtcg accgaggcgc agatcctcgt
     2041 caccggcatc aaggtcgtcg acctgctggc gccttacgcc cgcggcggca agatcggcct
     2101 gttcggcggc gccggcgtcg gcaagaccgt catcatcatg gagctgatca acaacatcgc
     2161 caaggcgcat ggcggctact cggtgttcgc cggcgtcggc gagcgcacgc gcgagggcaa
     2221 cgacctctat cacgagatga tcgagtcggg cgtcaacaag gacccgcaca gcggctcgac
     2281 ggccggctcg aaatgcgccc tcgtctacgg ccagatgaac gagccgccgg gcgcccgcgc
     2341 ccgcgtcggc ctcaccggcc tcacggtcgc cgagcatttc cgcgaccagg gccaggacgt
     2401 gctgttcttc gtcgacaaca tcttccgctt cacgcaggcg ggctcggaag tgtcggcgct
     2461 gctcggacgc attccctcgg ccgtcggcta ccagccgacg ctcgccaccg acatgggcgc
     2521 gctgcaggag cgcatcacga ccacgaccaa gggctcgatc acgtccgtgc aggcgatcta
     2581 tgtgccggcc gacgacctga ccgatccggc gccggccacg tccttcgcgc acctcgacgc
     2641 caccaccgtg ctgtcgcgct cgatcgccga aaagggcatc tatccggccg tcgacccgct
     2701 cgactcgacc tcgcgcatgc tgtcgccggc catcgtcggc gaggagcatt accaggtcgc
     2761 ccgccaggtg cagcaggtgc tgcagcgcta caaggcgctg caggacatca tcgccatcct
     2821 gggcatggac gagctgtcgg aagaggacaa ggtggcggtg gcgcgcgccc gcaagatcga
     2881 gcgcttcctg tcgcagccgt tccacgtggc cgaggtgttc accggcacgc cgggcgtgtt
     2941 cgtcagcctc gaggacacga tcaagagctt caagggcctc gtcgagggca aatacgatca
     3001 cctgccggag cccgccttct acatggtcgg caccatcgag caggcggtcg agaaggcgca
     3061 gcgcctcgcc gcggaagccg cctgatggcg acgttccact tcgagctcgt ggcgcccgag
     3121 cgcgtgctct attcgggcga ggtcgacgcc gtcatgctgc ccggcacgga aggcgacatg
     3181 accgtgctgc cgggccacgc gccggtcatg accagcctca agaccggctt cgtggtcgtc
     3241 accgaccgcc agaaccacgg cacgcgcgtg ctggtgcgcg gcggcttcgc cgagatcaac
     3301 gccgacgcgg tgatcgtgct ggccgagcgc gcgctcgacc agggcgagct cacgcccgac
     3361 agcatcgacc gcgagatctt gcaggtcgag atgcagcgcg acgccagcca cgacccggcc
     3421 ttcaaggacg ccgccgacgc gaccatcgtg cagctgcagg aagctcgcgc cgccctgcgc
     3481 tactgacgcg cgtttcccgt a
//
LOCUS       DATAIQ010000242         5276 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_427809, whole genome shotgun sequence.
ACCESSION   DATAIQ010000242 DATAIQ010000000
VERSION     DATAIQ010000242.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 5276)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5276)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5276
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_427809"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..275)
                     /locus_tag="VHN20_04135"
     CDS             complement(<1..275)
                     /locus_tag="VHN20_04135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019906388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX2724992.1"
                     /translation="MADIAAPARAQPEARAWAPSGAFAVAPRLKWALGLLLPLGLALG
                     WEAAVRFGFVEGRLMPPPSRIFETLYALARSGELWVHASATLWRVTVG"
     gene            complement(290..1267)
                     /locus_tag="VHN20_04140"
     CDS             complement(290..1267)
                     /locus_tag="VHN20_04140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009897 - external side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005488 - binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0042918 - alkanesulfonate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aliphatic sulfonate ABC transporter
                     substrate-binding protein"
                     /protein_id="HEX2724993.1"
                     /translation="MNLSRRSLFALSLAAGLGSLTTGVLAQAPKEIRIDFATYNPVSL
                     VLKEKGLLEKAFEKDGITVRWVQTLGSNKALEFLNAASIDFGSTAGSAALVAKINGNP
                     IKSIYVYSRPEWTALVTRANTGITKVADLKGKRVAVTRGTDPHIFLVRALQEAGLTDK
                     DVRFVLLQHPDGRLALDRGDVDAWAGLDPMMAAAEIENNDVLFYRKPEANTWGILNVR
                     EDFAKKNPEIVKRVLAVYEEARRWSLANPQEVKKIFADFTKLAPAVVDRQIDTRTELT
                     HSVIGEPQRESILAAGLALQSAGVIPANVDVKAAVDDLIDARYLTRATN"
     gene            1512..4268
                     /locus_tag="VHN20_04145"
     CDS             1512..4268
                     /locus_tag="VHN20_04145"
                     /EC_number="2.7.7.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008834220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008773 - [protein-PII]
                     uridylyltransferase activity [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="[protein-PII] uridylyltransferase"
                     /protein_id="HEX2724994.1"
                     /translation="MNAAAALAQLTERLAIAEDGDAAALRARLVPELRRVIEQGRAEA
                     QERLLAERDGLACARRLSGLMDGVVGVIHDAVLRQLYPAHNPSTGERLAIVATGGYGR
                     GALAPGSDIDLLFLMPHKQTAWGESVVEAMLYVLWDLKLKVGHATRSVDECIREAKGD
                     MTVRTALLDSRLLLGDETLYRDLVQRFGRDLVRRSASEFVEAKLRERDTRVVRAGASR
                     YLVEPNVKDGKGGLRDLNTLFWIAKYVYRVDEPADLVKAGLFTDEEFRLFARCEEFLW
                     RVRCHLHFLTGRAEERLSFDLQRLVAERIGYTGRKGLSSVERFMKSYFLIAKDVGDLT
                     AIVCAELEARQAKHRPVLDRVFGRFRRRRGGPFESSDFVVENDRINVRDENAFERDPV
                     NLIRLFWLADRHNLPINPDATRLATRSLRLIDQSLRDDAEANRLFLDILTSRNAPEVV
                     LRRMNEAGVLGRFIRDFGRVVAMMQFNMYHHYTVDEHLIRSLGVLADIDARRLADEHP
                     LSHRIIDTIQNRRALYVATFLHDIAKGRAEDHSIAGARIARKLGPRFGLDAAETDTAA
                     WLVEHHLLMSTTAQSRDLSDSKTIENFARVVQTMERLKLLLVLTIADIKAVGPGVWTG
                     WKGELLRTLYYETEVVLGGGVSEVARMDRVRQAQAALREALPDWPADAFEAYAQRHYV
                     AYWLKVEVSRMAKHARFLRDAEAVGRSVSTAFETDKFRGVTELTVLSPDHPRLLAIVT
                     GACAAAGGNIVDAQIFTTADGMALDTFFVSRAFERDEDELRRAERIALAIERALKGEV
                     RIADLVEGRRPARERQRTFHVAPEVVIDNSLSNRHTVVEISGLDRPGLLYDLTTALGK
                     LNLNIASAHIATFGEKAVDVFYVTDLTGTKVTHPSRQAAIRRALLDVFEGDGGEMPAR
                     AAGR"
     gene            4359..5012
                     /gene="grpE"
                     /locus_tag="VHN20_04150"
     CDS             4359..5012
                     /gene="grpE"
                     /locus_tag="VHN20_04150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009211149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000774 - adenyl-nucleotide exchange
                     factor activity [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_function: GO:0051087 - protein-folding chaperone
                     binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HEX2724995.1"
                     /translation="MTKPHTPDKGANEEVLRAAAANDSVPPVDFETPDGATGSTPAPG
                     RVAELEAEKLDLKEKLLRTLADMENLRRRTEREIADARTYAVTNFARDMLTVADNFQR
                     AVDAVPKEARETGEAVWKALIEGVELTERDMLKTLERYGVKRLDPQGEKFDPNLHQAM
                     FEVPNPDVPNGTVVQVVQTGYVIGDRVLRPALVGVAKGGPKAATPEASSDTAAGRPN"
     gene            complement(5043..>5276)
                     /locus_tag="VHN20_04155"
     CDS             complement(5043..>5276)
                     /locus_tag="VHN20_04155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724996.1"
                     /translation="LKDVVLERAQGFRQRGSDWHEIVAKATDVASGRPVIVTQVLRFA
                     SDHYIRVLGMARAEARDEMLSRFRAVADAVEPK"
BASE COUNT          843 a         1785 c         1788 g          860 t
ORIGIN      
        1 ccgacggtga cgcgccacag cgtcgccgag gcatggaccc acagctcgcc gctgcgggcc
       61 agcgcgtaaa gggtctcgaa gatgcggctc ggcggcggca tcagccggcc ttcgacgaac
      121 ccgaagcgca ccgccgcctc ccagccgagc gcgaggccga gcggcagcag caggcccagc
      181 gcccatttga ggcggggcgc gacagcgaaa gcgccggagg gggcccaggc gcgtgcttca
      241 ggttgcgccc gagcgggcgc ggcgatgtcc gccatcaagg cactcacggt cagttggtcg
      301 ccctcgtgag atagcgcgca tcgatgagat cgtcgactgc tgccttgacg tcgacgttgg
      361 ccgggatgac gccggcgctt tgcagggcga gcccggcggc gaggatcgac tcgcgctgcg
      421 gctcgccgat cacgctgtgc gtgagctcgg tgcgggtgtc gatctggcgg tccaccaccg
      481 ccggagccag cttggtgaag tcggcgaaga tcttcttcac ctcctgcgga ttggccagcg
      541 accagcgtcg cgcctcctcg tagacggcga gcacgcgctt gacgatttcc gggttcttct
      601 tggcgaagtc ctcacgcacg ttgaggatgc cccacgtgtt cgcctcgggc tttcggtaga
      661 acaggacgtc gttgttctcg atctcggcgg ccgccatcat cggatcgagg ccggcccatg
      721 cgtcgacgtc gccgcggtcg agggcgaggc ggccgtccgg gtgctgcagc agcacgaacc
      781 tgacatcctt gtcggtgagg ccggcctcct gaagggcgcg cacgaggaag atgtgcgggt
      841 cggtgccgcg cgtgaccgcg acgcgcttgc ccttgaggtc ggcgaccttg gtgatgccgg
      901 tgttggcgcg cgtgaccagc gccgtccatt ccggccgcga atagacgtag atcgacttga
      961 tcggattgcc gttgatcttg gcgaccagtg cggcggagcc ggcggtcgag ccgaaatcga
     1021 tcgaggcggc gttgaggaac tcgagggcct tgttggatcc gagcgtctgc acccagcgga
     1081 cggtgatgcc gtccttctcg aaggctttct cgagcagccc cttctccttg aggacgaggc
     1141 tgacgggatt gtaggtggcg aagtcgatgc ggatctcctt cggcgcctgg gcgagcacgc
     1201 ccgtggtcaa cgagccgagg cccgcggcga gggagagggc aaaaagcgag cggcgagaca
     1261 ggttcattga ggcatccccg gtttggcgtg gggatctgct gccgggcggg ttgaccgcct
     1321 cgctttcccc gcgctttagc tgcacttatt ccgcgcccgc aagctgcctg cttcaaatcg
     1381 gcgcgcgtcc tttgtttagg acgaaatgtt tgttttgtca aacgctctgc actagatttt
     1441 cactatttta gtgggccgct tcggcggatc agagtgacgc cggacgaccc actccattac
     1501 atctggtcct catgaatgcc gcggcagccc tcgcgcaact gaccgagcgt ctcgcgatcg
     1561 cggaagacgg cgatgcggct gccttgcgcg cccgcctcgt gccggaactg cgccgagtca
     1621 tcgagcaggg ccgcgccgag gcgcaggagc gcctcctcgc agagcgcgac ggcctcgcct
     1681 gcgcgcggcg cttgtccggg ctcatggacg gcgtcgtcgg ggtcattcat gacgcggtgc
     1741 tgcggcagct atatccggcc cacaatccct cgaccggcga gcgcctcgct atcgtcgcga
     1801 ccggcggcta cgggcgcggg gctttggcgc cgggctcgga catcgatctg ctgttcctca
     1861 tgccccacaa gcagaccgcg tggggcgaaa gcgtggtcga ggccatgctc tacgtgctct
     1921 gggacctcaa gctgaaggtc ggccacgcca cgcgctccgt ggatgagtgc attcgcgagg
     1981 ccaagggcga catgaccgtc cgcacggcgc tgctcgactc gcgcctgctg ctcggtgacg
     2041 agacgctcta ccgcgatctc gtgcagcgct tcggccgcga cctggtgcgg cgctcggcat
     2101 cggaattcgt cgaggccaag ctgagggagc gcgatacgcg cgtcgtccgc gcgggtgcct
     2161 cccgctacct cgtcgagccc aacgtcaagg acggcaaggg cggcctgcgc gatctcaaca
     2221 cgctcttctg gatcgccaaa tacgtctatc gggtcgacga gcctgcggat ctcgtcaagg
     2281 cgggcctgtt cacggacgag gagttccggc tgttcgcgcg ctgcgaggag ttcctgtggc
     2341 gcgtgcgctg ccatctgcac ttcctcaccg gccgcgccga ggagcggctc agcttcgacc
     2401 tgcagcggct cgtcgcggag cgcatcggct acacggggcg caagggcctc tcgtcggtcg
     2461 agcgcttcat gaagtcctac ttcctgatcg ccaaggacgt cggcgatctg accgccatcg
     2521 tttgcgctga gctggaggcg cggcaggcga agcaccggcc ggtgctcgac cgcgtgttcg
     2581 gccgcttccg ccgccgtcgc ggcgggccgt tcgagagcag cgatttcgtc gtcgagaacg
     2641 accgcatcaa cgtgcgcgac gagaacgcgt tcgagcgcga tccggtgaac ctgatccggc
     2701 tgttctggct cgccgaccgt cacaacctgc cgatcaatcc ggacgccacg cgcctcgcga
     2761 cgcgctcgct gcgtctcatc gatcagtcgc tgcgcgacga cgccgaggcg aaccggctgt
     2821 ttctcgacat cctgacctcg cgcaacgctc ccgaggtcgt cttgcggcgc atgaacgagg
     2881 cgggcgtgct cggccgcttc atccgcgact tcggacgcgt cgtggcgatg atgcagttca
     2941 acatgtatca tcactacacg gtcgacgagc atctgatccg ctcgctcggc gtcctggccg
     3001 acatcgacgc gcgccgcctc gcggacgagc atccgctctc ccaccgcatc atcgacacga
     3061 tccagaaccg gcgggcgctc tacgtggcga cgttcctgca cgacatcgcc aagggccgtg
     3121 ccgaggacca ttcgatcgcc ggtgcgcgca tcgcgcgcaa gctcgggccg cgcttcggcc
     3181 tcgatgccgc cgagaccgac accgcagcgt ggctcgtcga gcatcatctc ctgatgtcga
     3241 cgaccgcgca gagccgcgac ctgtccgatt ccaagaccat cgagaatttc gcgcgcgtcg
     3301 tgcagacgat ggagcggctc aagctgcttc ttgtcctcac catcgccgac atcaaggcgg
     3361 tcgggccggg tgtgtggacc ggctggaagg gcgagctgct gcgcaccctc tattacgaga
     3421 ccgaggtggt gctgggcggc ggcgtctccg aggtcgcccg catggatcgc gtcaggcagg
     3481 ctcaggccgc gttgcgcgag gccttgccgg actggcccgc cgacgcgttc gaggcatatg
     3541 cccagcgcca ctatgttgcc tattggctca aggtcgaggt gagccggatg gccaagcacg
     3601 cgcgcttcct gcgcgacgcc gaggcggtcg ggcgcagcgt cagcacggcc ttcgagaccg
     3661 acaagttccg cggcgtcacc gagctgacgg tgctgtcgcc cgatcacccc cgcctcctcg
     3721 ccatcgtgac gggcgcgtgc gcggcggccg gcggcaacat cgtcgacgcg cagatcttca
     3781 cgaccgccga cggcatggcc ctcgacacgt tcttcgtgtc gcgcgccttc gagcgcgacg
     3841 aggacgagct gcgccgcgcc gagcgcatcg cgctcgccat cgagcgcgcg ctgaaagggg
     3901 aggtgcggat cgccgacctt gtcgagggcc gccggccggc gcgggaacgg cagcgcacgt
     3961 tccacgtcgc gcccgaggtg gtgatcgaca acagcctctc gaaccgccac accgtggtgg
     4021 aaatctcggg gctcgaccgg cctggcctgc tttacgatct cacgacggcc ttgggtaagc
     4081 tcaacctcaa catcgcgtcc gcccacatcg ccaccttcgg cgagaaggcg gtcgacgtgt
     4141 tctacgtgac cgaccttacc ggaaccaagg tcacccatcc gagccgccag gcggccatcc
     4201 ggcgcgccct cctggacgta ttcgaagggg acggcggcga gatgccggcc cgggcggcgg
     4261 ggcgctgacc ccgaaccggc ccaagcgccc ggaaaagggt tgattttgcc caccttcgaa
     4321 ctgatatcac ccccaagcca actggaattg ccgatcccat gacgaagccg cacacgcccg
     4381 acaagggcgc gaacgaagaa gtcttgagag ccgcggcggc caacgattcc gtgccgccgg
     4441 tcgacttcga gacgcctgat ggtgcgacgg gctcgacgcc ggcgccgggc cgggtcgccg
     4501 agcttgaggc cgagaagctc gacctgaagg aaaagctgct gcgcacgctc gccgacatgg
     4561 agaatctgcg ccgccgcacg gagcgtgaga tcgccgacgc gcgcacctat gcggtgacca
     4621 acttcgcccg cgacatgctg accgtggccg acaattttca gcgcgccgtc gatgccgtgc
     4681 cgaaggaggc gcgcgagacc ggcgaggccg tgtggaaagc gctcatcgag ggcgtcgaac
     4741 tcaccgagcg cgacatgctc aagacgctcg agcgctacgg ggtgaagcgc ctcgacccgc
     4801 aaggcgagaa gttcgatccc aacctgcatc aggcgatgtt cgaggtgccc aatccggacg
     4861 tgcccaacgg cacggtggtc caggtcgtgc agaccggcta cgtgatcggc gaccgcgtgc
     4921 tgcgcccggc gctggtcggc gtcgccaagg gcggccccaa ggctgccacg ccggaggcct
     4981 cgagcgacac cgccgccggc cgcccgaact gattattcct gcccgtgcgg ggagggaaaa
     5041 ggttatttcg gctcgaccgc gtcggcgacg gcgcggaagc gcgacagcat ttcgtcgcgc
     5101 gcctcggccc gggccatgcc gagcacccgg atataatggt cggacgcgaa gcgtagcacc
     5161 tgcgtgacga tcaccggccg gcccgaggcc acatccgtcg ccttggcgac gatttcgtgc
     5221 cagtcggagc cgcgctgccg gaagccttgc gcacgctcga gaaccacgtc cttgag
//
LOCUS       DATAIQ010000243         2603 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_381854, whole genome shotgun sequence.
ACCESSION   DATAIQ010000243 DATAIQ010000000
VERSION     DATAIQ010000243.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2603)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2603)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2603
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_381854"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..268)
                     /locus_tag="VHN20_04160"
     CDS             complement(<1..268)
                     /locus_tag="VHN20_04160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018042115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724997.1"
                     /translation="MQWLASLSDAGAWLAPVATLAVTACAAAVLLLRDHIRLEQHALS
                     LESEVERLQDCVWQLAESETHYHSLIEGQLDIIVQQDPQGFITFA"
     gene            577..1716
                     /locus_tag="VHN20_04165"
     CDS             577..1716
                     /locus_tag="VHN20_04165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007007170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEX2724998.1"
                     /translation="MQDTIRVGVIGTGFMGKAHSLSYGVVAAIFGDVPRPVLATLCDV
                     EPTDLDAKARAFGFARFTSDWREVVADPSIDAVSITTWNRSHRDIAVAALAAGKHVWC
                     EKPMGLTLRDAEDMADAARRSGRVALLGYNYIHNPVLALARRLIGDGTIGTVFDFRGQ
                     IDEDYMADPDAPWTWRMRREEAGLGVLGDLMCHLVSAALLLVGPVEHVCAQLRTVYAT
                     RRLPTPPHARAEVDTDDHAHALVRFAGGGTGSLVASRVAHGRKNLLRFEVHGSKGMIV
                     FDQERFNELELFIADAAPDTRGFRRILSAPEHPPYGAFCRAPGHQLGFNDLKVIEAAH
                     FLRCIADREQPFVGFADGLQIERVIHGMAASAAAGGWMTVAPPRE"
     gene            complement(1966..>2603)
                     /locus_tag="VHN20_04170"
     CDS             complement(1966..>2603)
                     /locus_tag="VHN20_04170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2724999.1"
                     /translation="TTATEQKPAPGETPAARAPAPVLAVEQGPASGEALAIAEPSPIP
                     IRTVSAEVVKTGSIKPAPRVSEPGVVATMAEDAAVKPEVAAVKLEAAALKPELAGAKA
                     SDPQARPLEPMAAAVAPPARATITSAEANAYLAKAEAARRIGDLAVARLFFGRLADAG
                     DARGATGMALTYDDGELKKLPVFGLKGERAEAERWQTRARELTAKSTYARN"
BASE COUNT          407 a          886 c          873 g          437 t
ORIGIN      
        1 tcgcgaaggt gatgaaacct tgggggtcct gttggacgat gatgtcgagc tgcccttcga
       61 tgaggctgtg gtaatgggtc tcgctctcgg caagctgcca gacgcagtct tgaagccgct
      121 cgacctcact ttcgagcgac agcgcgtgct gctcgagcct gatgtggtcg cgcagcagca
      181 gcacagctgc cgcgcacgcc gtcacggcca gcgtcgccac cggcgccagc cacgctcccg
      241 catcgctgag cgatgccaac cactgcattc tgtttgccgc ctaattgttg ttgccggaca
      301 gcatgccgca agcggttgaa caagcgattg agaaagagtg tttacggaag gtgaggacga
      361 caccggggac tggaccggcg ccatgttccg gacgagagct agggaagcat taaccctttt
      421 tcggtcggca ccgggctgca actggtggca gggggcatcc cgatccgatc gaacccgcgg
      481 ttccgcaccc tgcgatcgag cagccggtct cgagccacgc gcttgcggcc ggcgcaaggc
      541 cgggcaagga tcacgcggga tgtggggcgg cagtccatgc aggacaccat cagggtaggc
      601 gtgatcggga ccggcttcat gggcaaggcg cactcccttt cctacggggt cgtcgctgcg
      661 atctttggtg acgtgccgcg gccggtcctg gcaaccctct gcgacgtcga gccgacggac
      721 ctggacgcca aggcgcgcgc cttcggcttc gcacgtttca cgagcgattg gcgcgaagtc
      781 gtcgccgacc cgtccatcga tgcggtctcg atcaccacct ggaatcgcag tcatcgcgac
      841 atcgcggtcg cggccctcgc agccggcaag catgtctggt gcgagaagcc gatggggctc
      901 acgctgcggg acgccgagga catggccgac gcggcgaggc gcagcggccg cgtcgcgctg
      961 ctcgggtaca actacattca caaccccgtt ctcgcgctgg cgcggcggct tatcggcgac
     1021 ggcaccatcg ggacggtgtt cgacttccgc ggccagatcg acgaggacta catggccgat
     1081 ccggatgcac cttggacctg gcgcatgcgc cgggaagaag ccggcctcgg cgtgctcggc
     1141 gatctgatgt gccacctcgt gtccgcggcc ctccttctgg tcgggccggt cgagcatgtc
     1201 tgcgcgcagc tgcgcaccgt gtatgcgacg cgccggttgc cgacgccgcc gcacgcgcgg
     1261 gccgaggtcg atacggacga ccatgcgcac gcgctcgtgc gctttgctgg cggcggtacc
     1321 ggcagtctcg tcgcaagccg cgtcgcccat ggccgcaaga acctgctgcg cttcgaggtg
     1381 cacggcagca agggcatgat cgtcttcgac caggagcgtt tcaacgagct cgagctgttt
     1441 atcgccgacg cagcgcccga cacgcgcggc ttccggcgca ttctcagcgc gcccgagcac
     1501 ccgccttacg gcgccttctg ccgggctccc gggcatcagc tcgggttcaa tgacctgaag
     1561 gtgatcgagg ccgcgcactt cctgcgctgc atcgccgacc gcgagcagcc attcgtgggc
     1621 ttcgctgatg ggctgcagat cgagcgcgtc attcacggca tggccgcctc ggcagccgcc
     1681 ggcggctgga tgaccgtcgc gccgccaagg gaatagcgcc acgaccgacc acatgtcgcg
     1741 gcggctacgt cgtgagttga ctgttgtgtg cgcaatggcc ggccgcagtc gctaacccgg
     1801 ggaaattaaa agctgcgacc cgttcgcagc acgccgaacg ccgcgatgca tgggccggct
     1861 ttagatccag accagaaaaa tcagagcggg gtcatctgca accgaccccg ctctgacagt
     1921 cagcaacggc atgtccccgg ctggcgaggc cagccgggtc ggcgctcagt tgcgggcata
     1981 ggtggatttc gccgtcagct cgcgcgctct tgtctgccag cgctcagcct cggcgcgctc
     2041 acccttgagg ccgaaaaccg gcagtttctt caactcgccg tcatcatagg tcagcgccat
     2101 gccggtggcg ccgcgtgcat cacctgcgtc ggcaaggcgg ccgaagaaca gacgcgccac
     2161 ggcgagatcg ccgatgcgac gggctgcctc ggccttggcg agataggcat tggcttcggc
     2221 cgacgtgatc gtcgcacgcg ctggcggcgc gactgcagcc gccatcggct cgagcggccg
     2281 cgcttgcgga tcggaggctt ttgccccggc cagctccggt ttcagcgcag cggcctccag
     2341 tttcaccgcg gccacctccg gcttcacggc cgcatcctcc gccatcgtgg cgaccacgcc
     2401 cggctcgctc acgcgaggcg ccggcttgat cgagccggtc ttcaccacct ctgcggaaac
     2461 ggtgcgtatc gggatcggtg acggctcagc gatggccagc gcctcgcccg acgccgggcc
     2521 ttgctcgaca gcaagcaccg gcgccggcgc gcgtgcggcg ggcgtctcgc cgggcgccgg
     2581 cttttgctcc gtcgcggtcg tcg
//
LOCUS       DATAIQ010000244         5291 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_236710, whole genome shotgun sequence.
ACCESSION   DATAIQ010000244 DATAIQ010000000
VERSION     DATAIQ010000244.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 5291)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5291)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5291
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_236710"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(4..603)
                     /locus_tag="VHN20_04175"
     CDS             complement(4..603)
                     /locus_tag="VHN20_04175"
                     /inference="COORDINATES: protein motif:HMM:NF012760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016742 - hydroxymethyl-, formyl- and
                     related transferase activity [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formyltransferase family protein"
                     /protein_id="HEX2725000.1"
                     /translation="MKVALIGTRWFGAQMLRLLKERGHELFVIATNGQDQFATAAEAA
                     GVPLVVLDNPRRLGADYLPAEVDVIVAAHSHAFITGEARARAKKAAIGYHPSLLPRHR
                     GIAAVEWTIKSRDPIAGGSVYHLSNSIDAGLIAAQDWCFVYPDDDANSLWRRALAPMG
                     LRLLMDVIEQVDQRGYAEAHEQDRKAVTYAPALKEPADV"
     gene            814..2607
                     /locus_tag="VHN20_04180"
     CDS             814..2607
                     /locus_tag="VHN20_04180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018044667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2725001.1"
                     /translation="MAGRKNLWQGDTIGLVRRLWRDWMRPHAPTLLLILVVTALVAGA
                     TGLYPVLIKIAFEAFAARDARLIMVAPAFVIAVTLLKGFALYALTYLTNRVVTRIEAD
                     MQTALYAHLIDADLTQLARESPAALTQRFTTDFGFIREALTRLSTILLRETATIAALV
                     VAMLWIDPVLTLVAAVIAPLVAQPIVRVGHKLRRVASSTQEQIGSMASLVSESLAGAR
                     VAKTYGLETYLKGRAGRAFDDVRRLKMKAANARGRLDPMLEAGGGLAVAGVLFLIGWR
                     VIEGQSTIGDFTGFVTALMLAAQPVRALGNLNAIVQEAVAALTRYFAVLDDAPAIVSR
                     PGAPALSVATGEIRFSGVQFRYRGDAAALEGVDLVAQGGRATALVGRSGSGKSTLLSL
                     VPRLYDVTGGAVTIDGQDVREVTLESLRSNIAVVSQDVVLFDDTIRANIAFGRQGASE
                     DEIVAAASAAAAHDFIMKLPERYDTRVGPGGTRLSGGERQRISLARAFLKNAPILLLD
                     EATSALDAESEQLVQQALATLMRERTTMVIAHRLSTVRAADLIAVMDGGRVIETGTHD
                     SLMAKGGAYARLQRLQVVHDAPERVPAIRGA"
     gene            complement(2591..3310)
                     /locus_tag="VHN20_04185"
     CDS             complement(2591..3310)
                     /locus_tag="VHN20_04185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003598038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004721 - phosphoprotein phosphatase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-protein phosphatase"
                     /protein_id="HEX2725002.1"
                     /translation="MLNRFRSVETRLARRSARIARWGRPIDGVGHRLQAWANMILADH
                     GVFRLAYLNHHRVTPKLWRSAQPAPHQIAWFAAQGVRTIVNLRGGREHGAWPLQKEAC
                     ERHGIKMVDFVVRSREAPHRETLLGARDLFDRLEYPVMVHCKSGADRAGFFAALYLLH
                     EGRPASEAIEQLSLRYGHFRFAKTGILDAVLERYRLDGESKGIAFFAWAEHHYDRDAV
                     VRDFKTRFWSDFLVDRVMHRE"
     gene            3664..4170
                     /locus_tag="VHN20_04190"
     CDS             3664..4170
                     /locus_tag="VHN20_04190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX2725003.1"
                     /translation="MKELVISIRRAKSEDAAALSGVFDSAWREAYQGIIPALALERMM
                     ARRGPRWWLSTIGRGRPLVVLDVGETIAGYVSYGRCRDRSLPADGEVDELYLAPEYQG
                     LGFGTRMFKAVRNDLGDRDIKRIVVWALSANERACAFYQRLGGKLIAETTERIGGTEL
                     SKVAYLFR"
     gene            4344..4877
                     /gene="ppa"
                     /locus_tag="VHN20_04195"
     CDS             4344..4877
                     /gene="ppa"
                     /locus_tag="VHN20_04195"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007559546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004427 - inorganic diphosphate
                     phosphatase activity [Evidence IEA];
                     GO_process: GO:0006796 - phosphate-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HEX2725004.1"
                     /translation="MRIDAIPIGRDPPQDVNVIIEVPIGGEPIKYEMDKDAGTLVVDR
                     FLYTAMRYPGNYGFIPHTLSGDGDPCDVLVANTRAIIPGAVMSVRPVGVLVMEDNAGE
                     DEKIIAVPSRHLTQRYDRIASYTDLPDITIRQIEHFFQHYKDLEPGKWVRIVRWGGAE
                     DAHALIRDGIERATAKR"
     gene            complement(4929..>5291)
                     /locus_tag="VHN20_04200"
     CDS             complement(4929..>5291)
                     /locus_tag="VHN20_04200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018261306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEX2725005.1"
                     /translation="LLGDAAHVIHPIAGQGLNLGLKGAAALAEVIADAVRLGLDPGSA
                     DVIDRYEKARRFDTVAMGAVTDGLNRLFSNDLLPVRLIRDLGLGLVDRMPRLKRLFVR
                     QAAGLAEAGPRLMRGESL"
BASE COUNT          831 a         1800 c         1840 g          820 t
ORIGIN      
        1 cggtcagacg tcggccggct ccttcagggc cggcgcatag gtgacggcct tgcgatcctg
       61 ctcatgcgcc tcggcgtagc cacgctggtc gacctgctcg atcacgtcca tcaggaggcg
      121 caggcccatg ggggcgagcg cgcgccgcca caggctgttg gcgtcgtcgt ccggatacac
      181 gaagcaccag tcctgggcgg cgatcaggcc cgcgtcgatg ctgttgctca agtgatagac
      241 gctgccgccg gcgatggggt cgcggctctt gatggtccat tcgacggcgg cgatgccgcg
      301 gtggcggggc agcagcgagg ggtgatagcc gatcgccgcc ttcttcgccc gggcgcgcgc
      361 ctcgcccgtg atgaaggcat gcgagtgggc ggcgacgatg acgtcgacct cggcagggag
      421 gtagtccgcc ccgaggcggc gtgggttgtc gagcaccacg aggggaacgc ccgcggcctc
      481 ggccgcagtc gcgaactggt cctggccgtt cgtcgcgatc acgaacagct cgtggccgcg
      541 ctccttgagc agccgcagca tctgcgcccc gaaccagcgg gtcccgatca aagcgacctt
      601 catgcatcct ccacgcctga ttcgagggcg ggcggctgcc cgccggcacc gccgggccct
      661 tttgcccgcc tggggcggtc aagggaaggg gcaggacgcc gctgcccaca aaggacccgg
      721 gcgcgccgcc agggccgtgc gttgcggcgc aaccgggcgc gtgctagcgc ggcagggcgg
      781 ctttgggggc cggcgccggg tgaaagcggg gcaatggccg gacgaaagaa tctttggcaa
      841 ggcgatacga tcgggctggt ccggcgcctg tggcgtgact ggatgcggcc gcacgcgccg
      901 acgttgctgc tgatcctggt cgtcaccgcg ctcgtcgccg gcgccaccgg gctctatccg
      961 gtgctgatca agatcgcctt cgaggctttc gcggcccgcg atgcgcgcct gatcatggtg
     1021 gcgccggcct tcgtgatcgc ggtcacattg ctgaagggct tcgcgctcta cgcgctcacc
     1081 tatctgacga accgcgtggt gacgcgcatc gaggccgaca tgcagacggc gctctatgcg
     1141 catctgatcg atgccgacct gacgcagctc gcgcgggaaa gcccggccgc gctgacgcag
     1201 cgcttcacaa ccgatttcgg cttcatccgc gaagctctga cgcgcctgtc gacgatcctg
     1261 ctgcgcgaga cggcgacgat cgcggcgctg gtcgtcgcga tgctctggat cgatcccgtc
     1321 ctcacgctcg tcgccgccgt catcgcaccg ctggtggcac agccgatcgt gcgggtcggc
     1381 cacaagctga ggcgcgtcgc aagctcgacc caggagcaaa tcggcagcat ggcgagcctc
     1441 gtctcggaaa gccttgcggg ggcgcgcgtc gccaagacgt atggcctcga gacctatctc
     1501 aagggccgcg ccgggcgcgc gttcgacgac gtgcgccggc tcaagatgaa ggccgcgaac
     1561 gcccgcggca ggctcgatcc gatgctggag gcgggaggcg gccttgcggt cgcgggcgtg
     1621 ctgttcctga tcggctggcg cgtcatcgag gggcagagca cgatcggcga tttcaccggt
     1681 ttcgtgaccg cgctgatgct ggcggcgcag ccggtcaggg ccctcggcaa cctcaacgcg
     1741 atcgtgcagg aggcggtcgc tgccctgacg cgctatttcg ccgtcctcga cgatgcgccg
     1801 gccatcgtct cacgacccgg cgcgccggct ctgtcggtcg ccaccggcga gatccgcttc
     1861 agcggcgtgc agttccgcta ccgcggcgac gccgcagcgc tcgagggcgt cgatctcgtc
     1921 gcgcagggcg gacgcgccac ggcgctggtc ggccgctccg gttcgggcaa gtcgacgctg
     1981 ctgtcgctcg tgccgcgcct ctacgacgtg accggcggcg ccgtcacgat cgacggccag
     2041 gacgtgcgtg aggtcacgct cgagagcctg cgcagcaaca tcgccgtggt cagccaggac
     2101 gtggtgctgt tcgacgacac catccgggcc aacatcgcgt tcgggcgcca gggcgcgagc
     2161 gaggacgaga tcgtcgccgc tgccagcgcc gccgcggcgc acgacttcat catgaagctg
     2221 ccggagcgct acgacacccg ggtcggtccg ggcggcacgc gcctgtccgg cggcgagcgt
     2281 cagcgcatct cgctggcgcg cgcattcctc aagaatgcgc cgatcctgct gctggacgaa
     2341 gccacgagcg cgctcgacgc cgagtcggag cagcttgtgc agcaggcgct ggccaccctg
     2401 atgcgcgaac gtacgacgat ggtcatcgcc caccggctat cgaccgtccg cgccgccgac
     2461 ctcatcgccg tgatggatgg cggccgcgtc atcgagaccg gaacccacga ttcgctgatg
     2521 gcgaagggcg gcgcctatgc gcggctgcaa cggcttcagg tcgtgcacga cgcgccggag
     2581 cgcgtccccg ctattcgcgg tgcatgacgc gatcgaccag gaaatccgac cagaaccgcg
     2641 tcttgaaatc gcgcaccacc gcgtcgcggt cgtagtggtg ctcggcccac gcgaagaacg
     2701 cgatcccctt gctttcgccg tcgagacgat accgctcgag caccgcgtcg aggatgcccg
     2761 tcttggcgaa ccggaaatgg ccgtagcgca gggaaagctg ctcgatggcc tcgcttgccg
     2821 gacggccctc gtggaggaga tagagcgcgg caaagaagcc ggccctgtcg gcgcccgact
     2881 tgcaatgcac catcacggga tattccaacc ggtcgaaaag gtcgcgggcg ccgagcaggg
     2941 tctcgcgatg gggcgcttcc cgggagcgca ccacgaaatc gaccatcttg atgccgtgcc
     3001 gctcgcaggc ctccttctgc aggggccagg cgccatgttc gcggccgccg cgcaggttga
     3061 cgatcgtgcg cacgccctgg gccgcgaacc aggcgatctg gtgcggcgcc ggctgcgccg
     3121 aacgccacag cttgggcgtg acccggtggt ggttcagata ggcgagccgg aaaaccccgt
     3181 gatcggcgag aatcatgttc gcccacgcct gcaggcggtg gccgacgccg tcgatgggcc
     3241 tgccccagcg cgcaatgcgg gcgctgcgcc gtgccaggcg agtctctacg gatcgaaaac
     3301 gattaagcaa gggaacgggc tttccgcgtg tcggccggca tcgggcgctg cctagcaaga
     3361 tggggacgca aggacaaccg cccgccagac ggcgctgaat cgggcgcatg gcacatagga
     3421 ttcgagcgcc cctttacact tcgttaactt taaggccgga tcgttggcgg tgggagatga
     3481 gaaccatgcg cctgcaccga gtcggtgccc tgagcagcga aagcgggctg aagccacgca
     3541 gcggccggtc cggcgttcct tgtcacctcc cgagcgctgc cgcacatcgg gttgtggaga
     3601 atcggggcaa gctaggcttg tgcctgcttt tcccggccga caagcctctc taggttcgcc
     3661 gccatgaaag aactggttat cagcatccgc cgcgccaaat cggaagacgc cgccgcgttg
     3721 tcgggcgtgt tcgactccgc atggcgagaa gcttaccagg gcatcattcc ggccctcgcc
     3781 ctggagcgga tgatggcgcg ccgcggaccg cgctggtggc tctcgaccat cggccgcggc
     3841 cgacccctgg ttgtgcttga cgtcggtgag acgatcgccg gttatgtatc gtatggccgc
     3901 tgccgcgacc ggtccctgcc ggccgacggc gaggtcgacg agctgtatct cgcgcccgaa
     3961 taccagggac tcggcttcgg cacgcgcatg ttcaaggccg tgcgcaacga tctcggcgac
     4021 cgcgacatca agcgcatcgt cgtgtgggcg ctgtccgcca acgagcgcgc ctgcgccttc
     4081 taccagcgcc tcggcggcaa gctgatcgcg gagacgaccg agcgcatcgg cggcaccgag
     4141 ctgtcgaagg tcgcctacct gttccgctag ccggcgcggg ccggcggccc gatcgccccg
     4201 tcagatacgc aggagccgat ttcgctcacg tgagatcggc tctcgcgctt cgtgggcgat
     4261 ttttcgtctg cgcgccttcg tgccgatcgc gcgaattgcg gctatgctcg cgcaacttcc
     4321 aaccggcgca gcggaggctt tgcatgcgca tcgatgcgat cccgatcggc agggacccgc
     4381 cccaggacgt caatgtcatc atcgaggtgc cgatcggcgg cgagccgatc aaatacgaga
     4441 tggacaagga cgcgggcacg ctcgtggtcg accggttcct ctacacggcc atgcgctatc
     4501 ctggaaatta cggcttcatc ccgcacaccc tgtccggcga cggcgacccc tgcgacgtgc
     4561 tggtcgccaa cacccgggcg atcatcccgg gcgccgtgat gagcgtccgc ccggtcgggg
     4621 ttctcgtgat ggaggacaat gccggcgagg atgaaaagat catcgccgtg ccgtcccgcc
     4681 acctcactca gcgttacgac cgcatcgcga gctacacgga cctgcccgac atcacgatcc
     4741 ggcagatcga gcacttcttc cagcactaca aggacctcga gccgggcaag tgggtgcgga
     4801 tcgtgcgctg gggcggcgcg gaggacgcgc acgcactgat ccgcgacggc atcgagcggg
     4861 ccacggcaaa gcgttgaagc aacatctggc gcggcgcgcc ggccggatca tccgggcgcc
     4921 ggcgcgcgtc agagcgactc gccgcgcatc aggcgcggcc cggcctccgc gaggccggca
     4981 gcctggcgca cgaacagccg cttgagccgc ggcatgcggt cgacgaggcc gaggccgaga
     5041 tcgcggatca gccgcaccgg caggaggtcg ttcgagaaca gccggttcag cccgtcggtc
     5101 acggcgccca tcgcgacggt gtcgaagcgg cgggcctttt cgtaacggtc gatcacgtcg
     5161 gcgctgccgg ggtcgaggcc gaggcgcacc gcatcggcga tcacttccgc gagcgccgcc
     5221 gcgcccttga ggccgaggtt gaggccctgc ccggcgatcg ggtggatcac atgcgccgca
     5281 tcgcccagga g
//
LOCUS       DATAIQ010000245         2470 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_290183, whole genome shotgun sequence.
ACCESSION   DATAIQ010000245 DATAIQ010000000
VERSION     DATAIQ010000245.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2470)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2470)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2470
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_290183"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..633)
                     /locus_tag="VHN20_04205"
     CDS             complement(<1..633)
                     /locus_tag="VHN20_04205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017994428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxide hydrolase"
                     /protein_id="HEX2725006.1"
                     /translation="MSDASLSPSRRAILATSAAVGAWGALSATDVAAEDGHAIRSFGF
                     NAPEEALVDLRRRVAATRWPEQENVSDDSQGVRLATIQALARYWATEYDWHKVEARLN
                     ALPQFITEVDGLDIHFIHVRSKHENALPMIVTHGWPGSIIEQLKVIDPLTDPTAHGAN
                     ASEAFHLVIPSLPGYGFSGKPTAPGWNPVRIGRAWATLMQRLGYTRYVAQG"
     gene            complement(763..1413)
                     /locus_tag="VHN20_04210"
     CDS             complement(763..1413)
                     /locus_tag="VHN20_04210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018495045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family protein"
                     /protein_id="HEX2725007.1"
                     /translation="MLPTGGGLALIDPSDTVLLLLDHQAGLFQTVKDISVAELRANTV
                     MLAKLATLLKLPVITTASEPNGPNGPLMPEIHQFAPQAVYVARKGEVNAWDNEDFVST
                     VRATGKKTLVMAGVWTSVCVMFPALDAKAAGFKVYAVMDASGDPSEMASRTTLGRFIQ
                     AGIIPISTNAVLSETHRTWNRPEAAELAKLYALAAPNYAAVIESYQKAQEVATKSR"
     gene            complement(1617..2285)
                     /locus_tag="VHN20_04215"
     CDS             complement(1617..2285)
                     /locus_tag="VHN20_04215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013803114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family protein"
                     /protein_id="HEX2725008.1"
                     /translation="MTQVTRLVRKEDVLVVLLDYQTGMFSLVRDLAPAEFKNNVLALA
                     ACARHFGVPTILTSIMDYGPNGPLLPEIRAMFPDAPYVRRSGEINAWDNAEFVQAVRA
                     TGRRQIVLAGIVTDAGVAMLALTAAELGFAVFVVSDACGTFSPAARDAAHRRLAGAGV
                     QLISWFALACELHRDWRNDIEGLAALFARHIPHYANLISSQAILPHKAERPPRGIAAA
                     PGDR"
BASE COUNT          432 a          778 c          810 g          450 t
ORIGIN      
        1 gccctgggcg acatagcgcg tgtagccgag gcgctgcatc aacgtcgccc acgcacggcc
       61 gatgcgaacc gggttccagc ccggcgccgt cggcttgccg gaaaagccgt agccaggcag
      121 cgatgggatt acgaggtgga atgcctcgga tgcgttcgcg ccatgcgccg tagggtcggt
      181 gagcggatcg atgaccttca actgctcgat gatcgatccg ggccagccgt gcgtgacgat
      241 catcggcagc gcgttctcat gcttagatcg aacgtggatg aaatggatgt cgaggccgtc
      301 gacctcggtg atgaactgcg gcaaggcgtt cagacgcgct tccaccttgt gccagtcata
      361 ttccgtcgcc caatagcgcg cgagtgcctg aatcgtggcc agccgcacgc cttgcgagtc
      421 atcactgacg ttttcctgtt cgggccaacg ggtcgctgca actcgccggc ggagatcgac
      481 gagcgcctct tcgggggcgt tgaagccgaa ggaccggatc gcgtgaccat cctccgctgc
      541 gacgtccgtt gcggagaggg cgccccaggc gccgaccgcg gctgacgtgg cgagaatggc
      601 acggcggctg ggcgacaacg acgcgtcgga catcatcatg ctccatggtg tcaaggtcgg
      661 cagccgatga tcagcattca gcacgaatat gcgagttaat cgccgcaaat cattattaac
      721 ggatgctggg ccgggcgggc tgcgcaccgg ctcgcctcca catcaacgtg atttcgtggc
      781 gacctcctgg gccttctgat agctctcgat gacggcggcg tagttcggag ccgcgagcgc
      841 atagagcttt gccagctcgg ctgcttcagg gcggttccag gtgcgatgcg tctcagacag
      901 gacggcgttg gtcgagatgg gaatgatgcc tgcctgaatg aaacggccga gtgtcgtccg
      961 cgacgccatt tcgcttggat cgcccgacgc atccatcacc gcatagacct tgaacccagc
     1021 cgccttggca tccagggccg gaaacatcac acagacgctg gtccagacgc cggccatgac
     1081 cagcgtcttc ttgccggtcg cgcgcaccgt gctgacgaag tcctcgttgt cccaggcgtt
     1141 cacttcgccc ttgcgcgcca catagacggc ctgcggcgcg aattggtgga tttccggcat
     1201 caaaggcccg tttggcccgt tcggctcgga cgcggtcgtg atcaccggaa gtttcagcag
     1261 cgtggccagc ttggcgagca tcaccgtgtt ggcgcgtagc tcggcgacgc tgatgtcctt
     1321 cactgtctgg aacagacccg cctgatggtc gagcagcagc agcacggtgt cagatggatc
     1381 gatcagcgcc agcccgcctc ccgtggggag cacgctcgat gacgccgccg tcgccggctg
     1441 ggcgaaggcg cgtggatgcg acgacagcag cgcgatggcg agggcgccga gaagaattgc
     1501 tttttttgcc atggtgcaca ttggtgtccc cttcgaggtt ggcgcaaggc tttcagcctg
     1561 caatgctgat gacgggttca cgcgtgcgga accgcggcaa ccgccggacg ctgtcgtcat
     1621 cgatcgcccg gagcggcggc gatgccgcgc ggcgggcgct cggccttgtg cggcaggatc
     1681 gcctgactac tgatcaggtt ggcgtaatgg gggatgtggc gggcaaacaa agcggcgagc
     1741 ccttcgatat cgttgcgcca gtcccggtgc agttcgcagg cgagggcgaa ccagctgatc
     1801 agctgcacgc cggcgcccgc caaccgccga tgcgccgcat cacgggctgc cgggctgaac
     1861 gtgccgcacg catccgagac gacgaagacg gcgaaaccga gctcggccgc cgtcagggcc
     1921 agcatggcga cgccggcgtc ggtgacgatc cccgcgagaa caatctgtct ccttcccgtt
     1981 gccctgacgg cctggacgaa ttcggcattg tcccaggcgt ttatctctcc cgagcggcgg
     2041 acataaggcg catccgggaa catcgccctg atctcgggca ggagagggcc gttcggcccg
     2101 taatccatga tgctggtcag gatcgtaggg acgccgaaat gcctggcgca ggcggcaaga
     2161 gcgaggacgt tgttcttgaa ctcggcgggc gcgaggtcgc gcacgagcga gaacatgccc
     2221 gtctggtagt cgagcagcac gaccaggacg tcctccttgc gcacgagcct cgtcacctgc
     2281 gtcacgatgc actcctcggc ctgcctctac acggccaaag gccttgattg cggccgctcc
     2341 cgcatcgctg cagttccgca tgcagcccgc cgccccgccc gtttggaatg atcccgactt
     2401 taggaccttg cgcgagttaa tcgccgcaaa ttgccattaa ctgatgcttg ttgcgttgcc
     2461 gaggttcctg
//
LOCUS       DATAIQ010000246         2653 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_13097, whole genome shotgun sequence.
ACCESSION   DATAIQ010000246 DATAIQ010000000
VERSION     DATAIQ010000246.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2653)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2653)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2653
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_13097"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..681
                     /locus_tag="VHN20_04220"
     CDS             <1..681
                     /locus_tag="VHN20_04220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX2725009.1"
                     /translation="DRRECGQSGGRVERVTWADFVAQGKGLLDHLKIERAHVMGGCMG
                     VSAAIAFGVAHPETVLSLVLWWPVGGAKYRLASHRRFAEHLAYVQQSGLEAVARLAKE
                     GGKPFGADPRGGPWASVLQHDDAFAAAYVKHDVEKYKALVAGMARTLFDRDTAPGAEP
                     EDLMQLDIPALIVPGSDESHATSAARYLQECLPWSDYWDIPVAEQTEANAPARVREFL
                     DKAGAGVP"
     gene            complement(692..1366)
                     /locus_tag="VHN20_04225"
     CDS             complement(692..1366)
                     /locus_tag="VHN20_04225"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX2725010.1"
                     /translation="MAGGTGGLGQAVSLAFLAEGASVAVSYRDRKGLDALDGAADANG
                     ARLEGHRVDVADEAAVGQVVDDIVRRHGRLDVLVNAVGGYAAGAPLWELDGKTLEQML
                     SLNLRSGFVLARAVLPTMLEKKQGAIVNVASRAAFDHAARSAAYAASKAAAVAMIDSL
                     AADLKGTGVRANSILPSIIDTPANRQSMPKADFAAWPKPDEIASVILFLCSDEARLIH
                     GAAIPV"
     gene            complement(1606..2520)
                     /locus_tag="VHN20_04230"
     CDS             complement(1606..2520)
                     /locus_tag="VHN20_04230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725011.1"
                     /translation="MNIQKVAQKPQVAIMNAVHDLPVLVARDEGLFKDEGLDIDFVTT
                     PGMAQVTTSHSVKFDSIFDRPLDSTYNEGGIDQFRMCEWGIMKRSVEADAEGRRKRRI
                     VALGASMSKFVIAVSPDSDIYEPEMLKNKAIAVTPNNGSHFTTLKMMEGFLAPEYVKT
                     TNAGTMRQRLDALKEGRVAAVSLMEPWISVAQKWGLRLLIESHSTRAEAAGDELDGPT
                     LKKMFRAQARAVELLEKDPKPYIHYLIRETGGLLEPNELQTWRLLHAPPQPYTRERFD
                     DTYNWTVKWNMTVPGATYENTVDNRAWQ"
BASE COUNT          392 a          881 c          904 g          476 t
ORIGIN      
        1 gaccggcgcg aatgcggcca gtcgggcggc cgggtcgagc gcgtcacctg ggccgatttc
       61 gtggcgcagg gcaaaggcct gctcgatcac ctgaagatcg agcgcgcgca cgtgatgggc
      121 ggctgcatgg gcgtcagcgc ggcgatcgct ttcggcgtcg cgcatcccga gaccgtgctg
      181 agcctcgtcc tgtggtggcc ggtcggcggc gccaaatacc gcctcgccag tcatcgccgc
      241 ttcgccgagc atctcgccta tgtgcagcag agcggactcg aggcggttgc caggcttgcc
      301 aaggaaggcg gcaagccgtt cggcgccgat ccgcgcggcg ggccatgggc gtcggtcctt
      361 cagcacgacg acgccttcgc ggcggcttac gtcaagcacg acgtcgagaa atacaaggcg
      421 ctcgtcgccg gcatggcgcg caccctgttc gaccgcgaca cggctcctgg cgccgagccc
      481 gaggacctga tgcaactcga catcccagcc ctgatcgtcc cgggaagcga cgagtcccac
      541 gccacctcgg cggcgcgcta cctgcaggaa tgcctgccgt ggtccgacta ctgggacatc
      601 cccgtggccg agcagaccga ggccaatgcg ccggcgcggg ttcgggagtt tctggacaag
      661 gcgggcgccg gcgtgccgta acccgcccac gtcacactgg aatggcggcg ccgtggatca
      721 gcctggcctc atcgctgcac aggaacagga tcacgcttgc gatctcgtcc ggcttgggcc
      781 aggcggcgaa gtcggccttg ggcatggact gccggttggc gggcgtgtcg atgatgctcg
      841 gcaggatgga gttggcccgc acgcccgtgc ctttcaggtc cgccgcgagg gagtcgatca
      901 tcgctaccgc ggccgccttc gacgccgcgt aggcggcgct gcgggcggcg tggtcgaagg
      961 ccgcgcgtga cgcaacgttg acgatcgcgc cctgcttctt ctccagcatc gttggcagca
     1021 ccgcgcgcgc cagcacgaac cccgaacgca ggttcaggct cagcatctgc tcgagggtct
     1081 tgccgtcgag ctcccacagc ggcgcgccgg cggcgtagcc gccgaccgcg ttgaccagca
     1141 cgtcgagccg cccgtggcgc cggacgatgt cgtcgacgac ctgccccacc gccgcttcgt
     1201 cggcgacgtc gacccggtgg ccttcgagcc tcgccccatt ggcgtcggcg gccccgtcaa
     1261 gcgcatccaa gcccttccgg tcgcggtagc tgacggccac ggacgcgcct tcggccagga
     1321 aggcgaggct gaccgcctgc ccgagcccgc cggtgccgcc ggccacgaga accgtctgtc
     1381 ctgaaaagcg cgtgctcatg acgtgctcac attcttcctc ctggagggag aaggtgtcgc
     1441 cgaagtcgac ggatcagggg tgtgacctat ccggataggg ccctcccctc acccgggcgc
     1501 ctccggcgcg gctcgacctc tccgacgcaa gtcgagtgtt cccggcttgc gcatcgtaaa
     1561 tggtggatct cgggaacacc cgaaatccat tggcggaggt gttgtttatt gccaggcgcg
     1621 gttgtcgacc gtgttttcgt aagtggcgcc gggcacggtc atgttccact tgaccgtcca
     1681 gttgtaggta tcgtcgaagc gctcgcgcgt gtagggctgc ggcggcgcgt gcagcaaacg
     1741 ccaggtctgc agctcgttcg gctcgagcag gccgccggtc tcgcggatga ggtaatggat
     1801 gtagggcttc gggtccttct ccaggagctc gacggcgcgc gcctgggcgc ggaacatctt
     1861 tttgagcgtc gggccgtcga gctcgtcgcc ggcggcctcg gcgcgggtcg agtgcgactc
     1921 gatcaagagt cgcaaacccc atttctgggc cacgctgatc cacggctcca tcaggctcac
     1981 ggccgcgacg cggccttcct tgagcgcgtc gaggcgctgg cgcatggtgc cggcattcgt
     2041 ggtcttgacg tattcgggcg caagaaaccc ttccatcatc tttagcgtgg tgaaatgcga
     2101 gccgttgttg ggcgtgaccg cgatcgcctt gttcttgagc atctcgggct cgtagatgtc
     2161 ggaatcgggc gacacggcga tcacgaattt cgacatcgac gcccccagcg ccacgatgcg
     2221 ccgcttgcgc cggccctcgg cgtcggcctc gaccgagcgc ttcatgatgc cccattcgca
     2281 catgcggaat tggtcgatgc cgccctcgtt gtaggtggag tcgagcgggc ggtcgaagat
     2341 cgagtcgaac ttgacgctat gcgacgtcgt gacctgcgcc atgccgggcg tggtcacgaa
     2401 gtcgatgtcg aggccctcgt ccttgaagag gccctcgtcg cgggcgacca gcacgggcag
     2461 gtcgtggacc gcattcatga tggcgacctg gggtttttgc gcgaccttct gaatattcac
     2521 agcatttcct ccacgtcctg agtgcgggcg cattggcccg cttattgttg attacccgcc
     2581 gccaggcggg tcgacgcgga tgatcttctt ggccgtgttc ggtgtcaacg gcggccgcgc
     2641 ggcttggccg ctc
//
LOCUS       DATAIQ010000247         2852 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_144779, whole genome shotgun sequence.
ACCESSION   DATAIQ010000247 DATAIQ010000000
VERSION     DATAIQ010000247.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2852)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2852)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2852
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_144779"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            224..763
                     /locus_tag="VHN20_04235"
     CDS             224..763
                     /locus_tag="VHN20_04235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007816184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004568 - chitinase activity [Evidence
                     IEA];
                     GO_process: GO:0006032 - chitin catabolic process
                     [Evidence IEA];
                     GO_process: GO:0016998 - cell wall macromolecule catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 19 protein"
                     /protein_id="HEX2725012.1"
                     /translation="MFPATPLKNIQANLPFVLEGLRAVGLTDRDMLLVALGTIRAETE
                     GFVPIDEFRSKFNTRITPFDLYDAGTPIGKRLGNTKPGDGPRFKGRGYIQLTGRFNYT
                     AIGKKIGVDLAGSPQLANDPPVAGRILAQFLADHEKCVRDGLAAGSLKRARKCVNGGS
                     HGLDRFSDAFNRGKAALPK"
     gene            complement(853..1440)
                     /locus_tag="VHN20_04240"
     CDS             complement(853..1440)
                     /locus_tag="VHN20_04240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725013.1"
                     /translation="MTTRTAFALPFLLGLAATFHATAAQRNPPPDTVISVVSADWNED
                     GAFDRAILTEGEQGDADLYIYLSVPAQGDARRELALVKPNAAWAGQMAGTQPSLDVSA
                     RGALLLKSSNLAVGRGRWEQVVTIVYRNRQFIVAGFTRTESDTVAPNAGRRCDLNFLS
                     GQGTRDGKRVTIGPQTIQLSAWNDEAGMEQCRLNN"
     gene            1613..>2852
                     /locus_tag="VHN20_04245"
     CDS             1613..>2852
                     /locus_tag="VHN20_04245"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009736786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HEX2725014.1"
                     /translation="MRAKVIVLLSAVALLAAPVAWARSLETARPEDAGLSSERLARLG
                     EAFKKEIQDGKLPGAVIMIARKGKVAYHEAFGYQDKAIEKTMAKDTIFRIYSMTKPIA
                     SVAAMMLVEDGKIQLTDPVSKFLPEFKSLQISAPRSDGLGQPTFALVAAERQPTVQDL
                     LRHTAGLAYGEITTNALVKSAYTKASLFKADFDYNTTDLAPDEFVQRLAQAPLAYAPG
                     TTWEYSLAVDVLGRVVEKASGKRLGEFLDERMFKPLQMNDTAFSVAQDKAGRLAEPLP
                     TDPATGNPNRLIDMRQPPKNDSGGAGLVSTANDYLRFGQMMLNGGELDGARVLSRTTV
                     ALMTSDHLPPAIRQTVQPGEQLLGVQGYTFGLGFAVRKEQGIAGVHGSAGEFTWGGYA
                     GTYFWIDPKEQLVGVLMTQAP"
BASE COUNT          486 a          959 c          963 g          444 t
ORIGIN      
        1 gccggtcgac gtcatcaagc gcgacgggct ctgggcggtg atcgatcgca acggcgacgg
       61 cgcggccgac gggcttgtgc ttgcggcttt cctggcggag cggccgcccg ccacgaccat
      121 cgcgctggcg gcgataccga cacgggacgg cgctcccgca gccgcagcgg cgcctcccgc
      181 cgatgatctt ctgtcgaaag tgacggccga tgccgtcaag aagatgttcc cagcaacgcc
      241 gctgaagaac attcaggcca acctcccgtt cgttctcgag ggattgcgcg ccgtcggcct
      301 gaccgaccgc gacatgctgc tggtggcgct cggaacgatc cgcgccgaaa ccgaaggttt
      361 cgtgcccatc gacgagttca ggagcaagtt caacacgagg atcacgccgt tcgacctgta
      421 tgacgccggc acgcccatcg gcaaaaggtt ggggaacacg aagccgggcg acgggccgcg
      481 cttcaaaggc cgcggctaca tccagctgac cggtcgtttc aattacacgg cgatcggcaa
      541 gaagatcggc gtcgacctcg ccggcagccc gcaactcgcc aatgacccgc cggtggccgg
      601 tcgcatcctg gcgcaattcc tggccgatca cgagaagtgc gttcgcgacg gcctagccgc
      661 cggcagtctg aagcgcgcgc gcaaatgcgt gaacggcggc tctcacggac tcgaccggtt
      721 cagcgatgcg ttcaacagag gcaaggcggc tctgccgaag taaggctgct ctgagcagag
      781 acagagtgcg tcggtggcgg gtgcgccggc gcgcccgcat cacggcacgg cacgccgggg
      841 acaggcgatg ccttaattgt tcagccggca ctgctccatg ccggcctcgt cgttccaggc
      901 ggacaactgg atcgtctggg ggccgatcgt cacgcgtttg ccgtcgcgcg tgccttgccc
      961 gctcaggaaa ttgaggtcgc agcgccgccc cgcgttcggc gccaccgtat cgctctcggt
     1021 gcgcgtgaag ccggcgacga tgaattgcct gttgcggtag acgatcgtga cgacttgctc
     1081 ccaccggccg cggccgacgg cgaggttgct ggatttcagg agaagcgcgc cgcgcgcgct
     1141 gacgtcgagg gacggctgcg taccagccat ctgcccggcc catgccgcat tgggcttgac
     1201 gagcgccagc tcccgtcgcg cgtcgccttg cgccggaacc gacaggtaga tgtagagatc
     1261 cgcgtcgcct tgttcaccct cggtgaggat ggcgcgatcg aaggcgccgt cctcgttcca
     1321 gtcggcggac acgacgctga tgacggtgtc gggaggcggg tttcgctgcg ccgccgtcgc
     1381 gtgaaaggtg gcggcgagcc cgagcaggaa gggcagggcg aatgcggtgc gcgtcgtcat
     1441 catgccattg tgaacatgcg agatgccggc aggttcccgc gggcgcgccg gcacggccga
     1501 tccgcctctc gcaccgtcgc gtgacgccgc gcgacgaagc gtttctactt cgccgcgtgc
     1561 ggcgcgaatg ctacgctcgc cgcgtcatct ctcgatgaca gggagaaccg ccatgagagc
     1621 gaaagtcatt gtgctgctgt cggccgtcgc gttgctcgcg gcgccggtcg cgtgggcccg
     1681 gtcgctggaa acggccaggc ccgaggacgc cggcctgtcg tccgagcgcc tcgcgcggct
     1741 cggcgaagcc ttcaagaagg agatccagga cggcaagctg ccgggcgcgg tgatcatgat
     1801 cgcgcgcaag ggcaaggtcg cctaccacga ggcgttcggc taccaggaca aggccatcga
     1861 gaagaccatg gcgaaggaca cgatctttcg catctactcg atgaccaagc cgatcgcctc
     1921 ggtcgcggcg atgatgctgg tcgaagacgg caagatccag ttgaccgacc cggtctcgaa
     1981 attccttccc gagttcaagt cgctgcagat cagcgcgccg cgcagcgatg ggctggggca
     2041 gcccacattt gccctggttg cggcggaacg ccagccgacg gtccaggatc tgttgcgcca
     2101 taccgccggc ctcgcctacg gcgagatcac caccaacgca ctcgtcaagt cggcctacac
     2161 caaggcgagc ctgttcaagg ccgatttcga ctacaacacc accgacctcg ctccggacga
     2221 attcgtgcag cgcctggcgc aggcgccgct cgcctacgcg ccgggcacga cctgggaata
     2281 cagccttgcc gtcgacgtgc tcggccgcgt cgtcgagaaa gccagcggca agcggctcgg
     2341 cgagtttctc gacgagcgca tgttcaagcc gctgcagatg aacgacaccg ccttctcggt
     2401 ggcgcaggac aaggcgggcc ggctcgccga gccgctgccg accgatccgg cgaccggcaa
     2461 tcccaaccgg ctgatcgaca tgcgccagcc gccgaagaac gactccggcg gcgccggtct
     2521 cgtgtcgacg gcgaacgact atctgcgctt cggccagatg atgctgaacg gcggcgagct
     2581 ggacggcgcg cgcgtcctga gccgcaccac ggttgcgctg atgacctccg atcacctgcc
     2641 gcccgccatc cgccagaccg tccagcccgg cgagcagctg ctcggcgtgc aaggctacac
     2701 gttcggcctc ggcttcgcgg tgcgcaagga gcagggcatc gccggggtgc acggctccgc
     2761 cggcgagttc acctggggcg gttacgccgg gacctatttc tggatcgatc ccaaggagca
     2821 gctggtcggg gtcctgatga cccaggcgcc gg
//
LOCUS       DATAIQ010000248         3685 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_329031, whole genome shotgun sequence.
ACCESSION   DATAIQ010000248 DATAIQ010000000
VERSION     DATAIQ010000248.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3685)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3685)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3685
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_329031"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(123..689)
                     /locus_tag="VHN20_04250"
     CDS             complement(123..689)
                     /locus_tag="VHN20_04250"
                     /inference="COORDINATES: protein motif:HMM:NF014664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEX2725015.1"
                     /translation="MPEQSRVSRLPPLPDPPTDPILIELQQDTRSRGGEVINLHLTLG
                     HAPKIAKARRALSGALRREASTPRILRELTILRTAQMVRSDYELNQHYPMALKSGLTQ
                     QQIDEVATWRDSKLFDEKQRALLAYVEQLLKGGDVDETTWAAFAAHFSPQEIIEISVT
                     ATNYYGTGLLTRAFRIQIETDGRQTAPA"
     gene            complement(775..1182)
                     /locus_tag="VHN20_04255"
     CDS             complement(775..1182)
                     /locus_tag="VHN20_04255"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX2725016.1"
                     /translation="MLKTDGVLHFTIPVKDLDRSEKFYTEVLGMERLRRNNHMVFMRA
                     GSDCFVLTYSENPIDPNRNNAHDIHHAFRVSAAGYDRAMQLLPSMGIPFIKQEDRRKG
                     TFQGRSAYFHDPDRNVIEIIDLVRGPVGENEDA"
     gene            complement(1230..2792)
                     /locus_tag="VHN20_04260"
     CDS             complement(1230..2792)
                     /locus_tag="VHN20_04260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725017.1"
                     /translation="MPLLIRVLSIALIGSLAEVGSAQAHAYGERYDLPVPLWLNLVGG
                     AAVVVLSFVIAALLLSSAGMTKTPRARRSLLSEAGLQARAWRMIVTTARVLSVCLLAL
                     AVLTGFFGKIDFSRNAAPTIVWAMGWVGLAFACALVGNVWLVLNPWLALFDAAQALWK
                     KLTGSARLSLALPYPEAVGIFPGILLMVGFVWFMLASGVAGEPFAIAAMLTIYSAVTW
                     TGMMLFGPAIWIARGEIFTLIAIILGRFAPIELRSGDVRSCLQVGCPPDAEQGCSDCP
                     AAFYASRRGLREVNLRPYGAGLVVARPLSASMTILVVMVLALVSFEGLMDTAQWIDLM
                     VALGEYEYSDGIHAPLKTTLLFVTATGLLYGIFYVVSALMRHLGYADAKKAGGIRLRT
                     TAEVMGLFVLSLVPIALAYHIAHYLYWFATNIQYVIPAASDPFAWGWNLFGARDYIPN
                     RTAVSLAVIWHTAVAAIVIGHVVGVWVAHRVALMTFHTRRSAFASQIPMLVLMVAYTM
                     SSLWMLAQPIMG"
     gene            complement(2818..3165)
                     /locus_tag="VHN20_04265"
     CDS             complement(2818..3165)
                     /locus_tag="VHN20_04265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725018.1"
                     /translation="MLAAVLIAGMSGAAPAQDVRRFDLAMKGGELAPQWRTLRVKQGD
                     AVELRWTSDHPLNLHLHGYDIELRVNPGEPAIMAFKAADAGRFGLTTVRAGGANTRSH
                     QHGGRVLYLEVHP"
     gene            complement(3312..>3685)
                     /locus_tag="VHN20_04270"
     CDS             complement(3312..>3685)
                     /locus_tag="VHN20_04270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725019.1"
                     /translation="PLNKYCPADRPGRDFGVHDVDRMIKGNILFSAWQQSGFWAIDIS
                     DPYAPKAAGHFVPPPFTRGGLDYSTADDVFVHENGYIYATSNEPGGGLWILQYTPGVK
                     GKVAWNADQKSVSVTRDTAAR"
BASE COUNT          670 a         1161 c         1235 g          619 t
ORIGIN      
        1 ggtggcggcg gactcgtcgg ccacgtcgaa tgtcacgccc tcggcttcgg caccgagtcg
       61 tctgcatatc cattgtcatt cgtgaatgcc ttcgttgacg gcgatcgccg tgccgatacc
      121 gcttacgcag gggccgtctg gcgaccgtcg gtctcgatct ggatccgaaa ggcgcgcgta
      181 agcagcccgg tgccgtagta gttggtcgcc gtcacgctga tctcgatgat ctcctgcggc
      241 gaaaaatgcg ccgcgaacgc cgcccaggtc gtctcgtcca cgtcgccgcc tttcagcagc
      301 tgctccacat aggcgagcag ggcacgctgc ttctcgtcga acagcttgct gtcgcgccag
      361 gtggcgacct cgtcgatctg ctgctgcgta agaccggact tgagcgccat cggatagtgc
      421 tggttgagct cgtagtcgct gcgaaccatc tgcgccgtgc gcaggatggt cagctcgcgc
      481 aggatgcgcg gcgtcgacgc ctcgcggcgc agcgcgcccg agagcgcccg tcgggccttg
      541 gcgattttcg gcgcgtgacc aagggtgaga tgcagattga tcacctcgcc gccgcggctg
      601 cgcgtgtcct gctgcagctc gatcagaatg gggtccgtcg gcggatcggg aagcggcggc
      661 agacgggata cgcgagattg ctcaggcacg ttgctggctc ctgtggttgg ttggtggtcg
      721 gatggcgcac ttgcttcgca gcgcccggca attcctcgat tccgggcctc ggcgtcaggc
      781 atcctcgttc tcgccgaccg gtccgcgcac gagatcgatg atctcgatca cgttgcggtc
      841 ggggtcgtgg aagtaggcgc tgcggccctg aaacgtgccc ttgcgccgat cctcctgctt
      901 gatgaacgga atgcccatgg acggcaggag ctgcatggcg cggtcgtatc cggcggcgct
      961 gacgcggaac gcgtgatgga tgtcgtgggc attgttgcgg ttggggtcga tcgggttctc
     1021 ggaataggta agcacgaagc agtcgcttcc ggcgcgcatg aacaccatgt ggttgttgcg
     1081 ccggagcctc tccatgccga ggacctccgt atagaacttt tccgagcggt cgaggtcctt
     1141 tacgggaatc gtgaagtgga gcacgccatc ggtcttgagc atgtgcttct cccaaatctg
     1201 cgcaggcatt gcgtgccttt cattcaagtc tagcccatga tcggctgggc caacatccac
     1261 aggctcgaca tggtgtaggc gaccatcagc acgagcatgg ggatctggct cgcgaaggcg
     1321 gaccgccgcg tgtggaacgt catcagcgcc acccggtgcg cgacccagac gccgacgacg
     1381 tggccgatca cgattgcggc gacggctgtg tgccagatca cggccaggct caccgccgtc
     1441 ctgttgggta tgtaatcgcg cgccccgaac aggttccagc cccaggcgaa cggatcagag
     1501 gcggccggga tcacatattg aatgttcgtg gcgaaccaat agaggtaatg ggcaatgtga
     1561 taggcgagtg cgatcggcac cagcgacagc acgaacagtc ccatcacctc ggccgtcgtg
     1621 cgcagccgga tgccgccggc cttttttgca tcggcgtaac cgagatgccg catcagcgcg
     1681 ctcacgacgt aaaagatacc gtagaggagc ccggtcgccg tcacgaacag gagcgtggtc
     1741 ttgaggggtg cgtgaatgcc gtcggaatac tcatactcgc cgagggcgac catgagatcg
     1801 atccactgcg ccgtgtccat gagcccttcg aagctgacca gggcgaggac catcacgacg
     1861 aggatcgtca tcgacgcgga cagcgggcgc gcaacaacga gtccggcgcc gtaagggcgc
     1921 agattcacct cgcgcagccc gcggcgcgag gcgtagaagg cggcgggaca atcggagcag
     1981 ccctgctcag cgtccggagg acagccgacc tgcaggcagc tccgaacgtc gccgctgcgc
     2041 aactcgatcg gagcgaagcg gccgaggatg atggcgatga gcgtgaagat ctcgccgcgg
     2101 gcaatccaga tcgccggtcc gaacagcatc atgcctgtcc acgtgaccgc ggagtagatc
     2161 gtcaacatgg ccgcgatcgc gaacggctcg ccggcgacac cggatgccag catgaaccac
     2221 acgaagccga ccatcagcag gatgccgggg aagatcccga ccgcctcggg atagggcagg
     2281 gccagcgaca gccgcgccga gcccgtcagc tttttccaga gcgcctgcgc cgcgtcgaac
     2341 aacgccagcc agggattcag gacgagccag acgttgccga ccagggcgca cgcgaaggcg
     2401 aggccgaccc atcccatggc ccagacgatc gtgggagcgg cgttgcgcga gaagtcgatc
     2461 ttgccgaaaa atccggtcaa cacggcaagc gccaacaggc acaccgacaa aacgcgcgcc
     2521 gtcgtgacga tcatgcgcca ggctcgtgcc tgcagccctg cctccgacag caggctgcgg
     2581 cgggcccgtg gggttttggt catgcccgcc gagctcagca ggagcgcggc gatcacgaag
     2641 gagaggacca caacggcggc cccgccgacg aggttgagcc aaagcggcac cggcaggtcg
     2701 taacgttcgc cataggcatg cgcttgcgcg gaacccacct ccgcgagtga tccgataagg
     2761 gcaatcgaca gaacgcgaat cagcaacggc acgcaaactc cgacatgttc gtcgtgttca
     2821 cgggtgcact tccagataca gcacgcgccc gccgtgctgg tggctgcggg tgttggcgcc
     2881 gcctgcgcgc acggttgtca gcccgaagcg accggcgtcg gcagccttga aggccatgat
     2941 tgcgggttcg ccggggttga cgcgcagctc gatgtcgtag ccgtgcagat gcaggtttag
     3001 cgggtggtcc gaggtccagc gcagctcgac cgcgtcgccc tgcttgactc gcagggtgcg
     3061 ccattgcggg gcaagttcgc cgcccttcat cgcgagatcg aagcggcgga cgtcctgcgc
     3121 cggcgcagcg cccgacatcc cggcaatcag gacggcagca agcattgccc gccacacgac
     3181 gaacctcgac gcacgggggc ggggacgtcg tcgtcctcgg cttgtagaca gcatggtcac
     3241 cagggacagc tcatgcgcga cgaaaggcgc ggcagcacat gtggccgccg cgccgtcggc
     3301 gcctctctcg gctaacgtgc cgccgtgtcc cgcgtgacgc tcacgctctt ctgatcggcg
     3361 ttccacgcaa ctttgccctt cacgccgggg gtgtattgga ggatccacag gccgccgccc
     3421 ggctcgttcg acgtggcgta aatatagccg ttttcgtgca cgaacacgtc gtcggccgtg
     3481 gagtagtcga gcccgccgcg cgtgaaaggc ggcggcacga aatgacccgc ggccttgggt
     3541 gcataggggt cggaaatgtc gatcgcccag aagccggact gctgccaggc gctgaacagg
     3601 atgttgccct tgatcatgcg atcgacgtca tggacgccga aatcgcggcc gggccggtcc
     3661 gccgggcaat atttgttgag cggta
//
LOCUS       DATAIQ010000249         1907 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_105510, whole genome shotgun sequence.
ACCESSION   DATAIQ010000249 DATAIQ010000000
VERSION     DATAIQ010000249.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1907)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1907)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1907
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105510"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            121..483
                     /locus_tag="VHN20_04275"
     CDS             121..483
                     /locus_tag="VHN20_04275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725020.1"
                     /translation="MSRNPDIPPAQTARPMGPPPFTPRPTAPQLQGDIDSGRSGDKVG
                     VFDPALAPLGTDDEAAGRPPEAARVAMARRAETTERWAGDGKKEGYAHRRGGVALYAF
                     IALIVVIAALFVGLTWFR"
     gene            complement(491..1387)
                     /locus_tag="VHN20_04280"
     CDS             complement(491..1387)
                     /locus_tag="VHN20_04280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEX2725021.1"
                     /translation="MRALWSWLFGRPFLLLVLTTLMWGGNAVASRLAVGHISPMALTC
                     LRWLGVCAILAPLMGRQVVADLPVLLPRWSYIALMAALGFTVFNALMYAAAHHTSAVN
                     LTILQGSVPVLVLLGSLVWFGTRIRLVQILGMAVTLIGVATVAARGEFETLATLAFNI
                     GDVWMMFACAAYAGYTVALRKRPQVSGFVFFAAMAAVAFALTIPLLAWEVARGTVIWP
                     DARGWAILLYVTLFPSLLSQIFYMRGVELIGPGRAGLFVNLVPVFGAMLAVALLGEPF
                     RLYHALSLGLVLAGIWLAERNR"
     gene            1437..1907
                     /locus_tag="VHN20_04285"
                     /pseudo
     CDS             1437..1907
                     /locus_tag="VHN20_04285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012320237.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
BASE COUNT          339 a          663 c          691 g          214 t
ORIGIN      
        1 tttgcgcgtt ttgatggcag catagctcgt cccatggctg ccaggagcgg gaaccaccgc
       61 cgcggcccgt gggttcacgg atgtcgcccg gcccgatgag ccgggcccgg gacaacgatc
      121 atgagccgca atcccgatat ccctccggcg cagacggcac ggccgatggg gccgccgccg
      181 ttcacgccac gcccgacggc gccgcagctg cagggcgaca tcgacagcgg ccgcagcggc
      241 gacaaggtcg gcgtcttcga ccccgccctg gcgccgctcg gcaccgacga cgaggcggcc
      301 gggcggccgc cggaagcggc gcgcgtcgcc atggcgcgcc gcgccgaaac gaccgagcgc
      361 tgggccggcg acggcaagaa ggaaggctat gcgcatcgcc gcggcggcgt ggcgctgtat
      421 gcgttcatcg cgctgatcgt cgtgatcgcg gccctgttcg tcgggctgac gtggttccgc
      481 tgaggcccgc tcagcggttg cgttcggcca gccagatgcc ggcgagcacg aggccaagcg
      541 agagggcgtg gtaaaggcgg aacggctcgc cgaggagcgc caccgcgagc atggcgccga
      601 ataccggcac gaggttgacg aacaacccgg cgcggcccgg cccgatcagc tcgacgccgc
      661 gcatgtagaa gatctgcgag agcagcgacg ggaacagcgt cacgtagagg aggatggccc
      721 agccgcgcgc gtcgggccag atgaccgtgc cgcgcgccac ctcccaggcg agaagcggaa
      781 tcgtcagcgc gaaggcgacc gccgccatgg ccgcgaagaa gacgaagccg gatacctgcg
      841 ggcgcttgcg cagcgccacc gtgtagcccg cgtaggcggc gcaggcgaac atcatccaca
      901 cgtcgccgat gttgaaggcg agggtggcga gcgtctcgaa ctcgccgcgc gccgcgaccg
      961 tggcgacgcc gatcagcgtg acggccatgc cgaggatttg cacgagacgg atgcgcgtgc
     1021 cgaaccagac gaggctgccg agcagcacca ggactggcac ggagccttgc aggatggtga
     1081 ggttgacggc gctggtgtgg tgcgcggccg catacatcag cgcgttgaag accgtgaagc
     1141 cgagcgccgc catcagggcg atgtaggacc agcgcgggag cagcacgggc aaatcggcga
     1201 cgacctggcg gcccatcagc ggggcgagga tcgcacacac tcccagccag cgcagacagg
     1261 tcagcgccat cggcgagata tggccgaccg caagccggct cgcgaccgcg ttgccgcccc
     1321 acatcagggt cgtgagaaca aggagcagga agggccgccc gaagagccag ctccagagcg
     1381 cgcgcatggt cgtcatccac cgcggatcag cgatgcgaaa cggcttgtca accctcggcc
     1441 agaccaacct gctggcgctc aacgccacca tcgaggcggc gcgggccggc gacgccggcc
     1501 gcggcttcgc cgtggtcgcc caggaggtca aggtgctggc cgagcagacc gcccgcgcga
     1561 ccgccgagat cgccgcccag atcaccgaga tccagacgta caccgccgag tcggcgaccg
     1621 ccatcaacgg cgtcgccggc gtgatccgcg agatcaacga catcgccgag cgcatcgccg
     1681 cgtcggtcga ccagcagggc gcggcgacgc aggagatcgc ccgcaacgtg caggaggcgg
     1741 cgcagggcac gggcgaggtt tcggtcaaca tcgccggcgt cagccgcgcc acccaggaat
     1801 cgagcgccgc ctcgacgcag ctcctgtcgt cggcgtccga cctgtcgcgc cagtccgaga
     1861 cgctgcgcgg cgaggtgcag cgcttcctcg cctcggtgcg cgccgcg
//
LOCUS       DATAIQ010000250         4461 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_382311, whole genome shotgun sequence.
ACCESSION   DATAIQ010000250 DATAIQ010000000
VERSION     DATAIQ010000250.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4461)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4461)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4461
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_382311"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(328..1716)
                     /locus_tag="VHN20_04290"
     CDS             complement(328..1716)
                     /locus_tag="VHN20_04290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX2725022.1"
                     /translation="MKVLAGRSIAVRLAASAVFWSLAILLIAGLILSALYRETTERAF
                     DQRLLVYASDLAADLVAPGDPEQRELGALGDPRFDIPMSGWYWQVGRPDARPRDMRGS
                     KSLFGGQLPSLVASEEDRRFGEVRKGYGSAPDERMLRIVERDIDLGEDGRFVVRVGGP
                     ADEIDQDVRRFVFALTITFALLGVALGSTTLLQIRFGLAPLLKLRSAVSDIRRGESDR
                     IAGDYPRDIAPLARELNLLLDTNREILERARTQVGNLAHALKTPLSVIVNEVAGGPGE
                     LAGKVQEQAAVMRDQVTYYLDRARAAALAGRLGVITDVAPVIAGLVRTFEKIFSDKKL
                     AVDVSMPPGARFRGERQDLEEMAGNLIDNACKWARSRVEIRVEAVRDEDRARIHITVE
                     DDGPGLPAEARAEMLKRGRRLDETKPGSGLGLSIVADLAGLYRGSLSLEAATLGGLRA
                     TLDLPGDASPLL"
     gene            complement(1713..2393)
                     /locus_tag="VHN20_04295"
     CDS             complement(1713..2393)
                     /locus_tag="VHN20_04295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012115153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX2725023.1"
                     /translation="MRLLVVEDDKNLNRQIVTALEHAGYAVDRAFDGEEGQFLGETEP
                     YDAVILDLGLPKVDGVSLLNAWRRGGHKMPVIILTARDRWSDKVQGFDAGADDYVTKP
                     FHMEELLARVRALLRRATGHATSELVCGPVRLDTRSGRVAVDGEAVKLTSHEYRLLSY
                     LMHHAGRIVSRGELTEHLYDQDFDRDSNTIEVFVGRLRKKLGVDVIQTVRGLGYLIDA
                     KADDQRRA"
     gene            complement(2408..2719)
                     /locus_tag="VHN20_04300"
     CDS             complement(2408..2719)
                     /locus_tag="VHN20_04300"
                     /inference="COORDINATES: protein motif:HMM:NF015378.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HEX2725024.1"
                     /translation="MRSQLVGLALLGALSNTRAEIAIYAQPCLSAREMQEVVSTERVL
                     KPALAIAAARRSVPNSEMLRASMCRDQDVLIYVISVLRKDGRVVHVLIDARSGKVTDV
                     K"
     gene            3016..3327
                     /locus_tag="VHN20_04305"
     CDS             3016..3327
                     /locus_tag="VHN20_04305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012335786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcH family protein"
                     /protein_id="HEX2725025.1"
                     /translation="MGNTPHELAEEFPDMAGRIHALKTSDSRFARLVEEYHEVNRQIH
                     RIETRVEPASEDVEEEFKRRRVRLKDEIAQMLEGSDVAYSDASPVRADPAASPRLRGG
                     F"
     gene            3647..4360
                     /locus_tag="VHN20_04310"
     CDS             3647..4360
                     /locus_tag="VHN20_04310"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019906442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like serine protease"
                     /protein_id="HEX2725026.1"
                     /translation="MSALAPAHAIVGGNSDQGPLARATVMVLAAGGGMCSAVVVARDA
                     VLTAAHCVTGAREHRVHFRDEAGQPAFIEPTAKAVHPGYDAKAIEARRRSIDLALLRL
                     PQPLPPRFEAATLSAATVTRGVLVAIGGYGVVREGDARSTGTYRVARVATVEPHGPSR
                     ILVWASGTEHGGAGACEGDSGGPITRDDAGSVFAITTWATGLKGRGCGQYSQGVLLAP
                     QRAWIDATLAKWGGSANWQ"
BASE COUNT          773 a         1469 c         1521 g          698 t
ORIGIN      
        1 ggccgccgcg acaacggcca gagcacagcc atcacggccg ccccggtcat cagcgcgaaa
       61 ataagccaaa tcgccattgc atctatctac attgggccac ggcccgacac gatggcccgc
      121 gcggcgacac ggtgacgccc cttttccctt ccggccaggt ggaaggtcga ccctgcacaa
      181 gagagcccgt tgaggcggag gcgcgaccta tcgacagagt cggcgccacc cttccctcag
      241 gggcaccagg ctcgcgcctg ccgggttcag gtccctagat gcgcaagtcg gatatccggc
      301 ttgaaacgcg accgtgcgtc tgtcccgtca gaggagaggc gaagcatccc ccggcaggtc
      361 gagggtcgcc cgcaggccac cgagcgtcgc cgcttcgagg ctcagggagc cgcgataaag
      421 gcccgcgagg tcggccacga tggacaggcc gaggcccgag cccggcttgg tctcgtcgag
      481 ccggcggccg cgcttgagca tctcggcgcg ggcctcggcg ggcaggccgg ggccgtcgtc
      541 ttcgactgtg atgtgaatgc gggcccggtc ctcgtcgcgg accgcctcga cccggatctc
      601 gacgcggctc ctggcccatt tgcacgcatt gtcgatcaga ttacccgcca tctcctcgag
      661 gtcctggcgt tcgccccgaa agcgcgcacc cggcggcatc gaaacgtcca ccgccagctt
      721 cttgtcgctg aagatcttct cgaaggtgcg cacaaggccg gcgatcaccg gcgcaacgtc
      781 ggtaatgacg ccgagcctgc ccgccagcgc cgcggcgcgc gcccggtcga gataataggt
      841 gacctgatcg cgcatcaccg ccgcctgctc ctgcaccttg cccgcgagtt cgccgggccc
      901 gcccgccacc tcgttgacga tgacgctgag cggcgtcttg agggcgtggg cgaggttgcc
      961 gacctgcgtg cgcgcgcgct ccaggatttc gcgattggtg tcgagcagca ggttcagctc
     1021 acgggccagc ggggcgatgt cgcgcggata atcgcccgcg atgcgatccg actccccacg
     1081 ccggatgtcc gacacggcgc tcctgagctt gaggagcggc gccaggccga agcggatctg
     1141 caggagggtg gtcgagccga gggcgacgcc caggagagcg aacgtgatgg tgagggcgaa
     1201 gacgaagcgg cgcacgtcct gatcgatctc gtcggcaggt cccccgaccc tgacgacgaa
     1261 gcggccgtcc tcgcccaggt cgatgtcgcg ctcgacgatg cgcagcatgc gctcgtcggg
     1321 ggccgagccg taacccttgc ggacctcgcc gaagcggcgg tcctcctcgc tggcgaccag
     1381 gctcggcagc tggccaccaa acagggattt ggagccgcgc atgtcgcggg gccgtgcatc
     1441 cggccggccg acctgccagt accagcccga catcgggatg tcgaagcgcg gatcgccaag
     1501 cgcgccgagc tcgcgctgct cgggatcgcc gggagcgacc aggtctgccg ccagatcgct
     1561 tgcgtaaacg agaagacgct gatcgaacgc ccgttcggtc gtctcgcgat agagcgccga
     1621 caggatcaat cccgcgatca gcaggatggc gaggctccag aagacggcgg aagcagccag
     1681 tcgaacggcg atggaacggc cggcgagcac tttcatgcgc gccgctgatc gtcggctttc
     1741 gcatcgatca ggtagccgag cccgcgcacg gtctggatca cgtccacgcc gagcttcttg
     1801 cgcagacgcc cgacgaagac ctcgatcgta ttcgaatccc ggtcgaagtc ctggtcgtag
     1861 agatgctcgg tcagctcgcc gcgcgagacg atgcgaccgg cgtgatgcat caggtaggac
     1921 agcagccgat attcgtgcga ggtcagcttg acggcctcgc cgtcgaccgc gacacggccg
     1981 gaacgggtgt cgagccgcac cggaccgcag accagctcgc tggtggcgtg gccggtggca
     2041 cggcgcagca gcgcgcgaac ccgggcgagc agctcttcca tgtggaaagg cttggtcacg
     2101 tagtcgtcgg cgcccgcgtc gaacccctgg accttgtcgc tccagcggtc gcgggcggtc
     2161 aggatgatga ccggcatctt gtggccgccg cgacgccacg cattgagaag cgaaacgccg
     2221 tccaccttgg gcaggccgag atcgaggatg acggcatcat agggctcggt ctcgcccagg
     2281 aactggccct cctccccgtc gaaggcacgg tcgacggcat agccggcatg ctcgagagcg
     2341 gtgacgatct gacggttgag gttcttatcg tcctcgacga cgagaagacg cacggggcta
     2401 cagctcctta tttgacgtcg gtgactttgc cggaccgggc gtcgatcagg acgtggacga
     2461 cccgcccatc cttgcgcaag acgcttatca cataaatcag cacgtcctgg tcccgacaca
     2521 tgctggcgcg cagcatctcg gaattgggca cgctgcgcct ggcggctgcg atggccagcg
     2581 ccggcttgag gactcgttcg gtggaaacga cctcctgcat ctcccgggca gagaggcagg
     2641 gctgcgcata gatggcaatc tcggcacgcg tgttgctcag agcgcccagg agggcgaggc
     2701 cgaccagttg cgagcgcatt gagaaaacct gcctgcccag gactgaacga aaactgaaca
     2761 agcatgcccc cctgcaccgg gctggcatgc cagcggctgg cggcaagctg ggcggcgcat
     2821 gcccggatgc atcctcccct gactgcatcg cccaagcgcc gcgccgcacc tgcccgccct
     2881 ccaccggctc agacagaaac ctgccgggct tcagcttacc gcgaaagcca cctttaaagg
     2941 ttggcgcgaa ctgttggtcc cgtcgtcgcg ttaacgctgc acaaagcgac gtcccgaaca
     3001 gaatgggaga cagcgatggg caatactccg cacgaactcg ccgaggaatt ccccgacatg
     3061 gcgggccgga tccacgcgtt gaagacaagc gacagccgct tcgcccggct ggtcgaggag
     3121 tatcacgagg tgaaccgcca gatccatcgg atcgagacac gggtcgagcc ggcctcggaa
     3181 gatgtcgaag aggagttcaa gcgccggcgc gtgcgcctga aggatgagat cgcgcagatg
     3241 ctcgagggta gtgacgtggc ctattcggac gcaagtccgg tccgcgccga cccagcagct
     3301 tcgccgcgcc tgcgaggcgg cttctgaccc ctcaggcggg cggcggaaag ctccctttcg
     3361 tcgttgtcgg agcgacgcca tggcggcgag cccggacacg aaccgggtgc gacatcggtt
     3421 gcatgattgc accggtcccg gcctctcgcc cggggcccat ctgtccagcc ggccgaagac
     3481 cggatccgct ggcgaggagc ggcccgataa tcgagccatg gctacacggc ccgcataatg
     3541 ggatatgcgt aattcgcgta gtccatattg cgggggatcc atgcgtcacc aatgtcgatc
     3601 tgtggatcgg cgactgaggc tttgcgtctc gctcgcgctg tcggtcgtgt cggcactggc
     3661 gccggcgcac gccatcgtcg gcggcaatag cgatcaggga ccgctggcgc gcgccacggt
     3721 catggtgctt gccgcgggcg gcggcatgtg cagcgccgtg gtggtcgccc gtgatgccgt
     3781 gctcacggct gcgcattgcg tgacgggcgc gcgcgagcat cgcgtgcatt tccgagacga
     3841 ggcgggacag cctgccttca tcgagccgac agccaaagcc gtgcatccgg gctacgatgc
     3901 caaggcgatc gaggcgcgtc ggcgctcgat cgatctcgcc ttgctgcgct tgccgcagcc
     3961 gctcccgcct cgcttcgagg ccgcgacgtt gtcggcggcc actgtcacgc gtggcgttct
     4021 tgtcgccatc ggcggttacg gcgtggtgcg agaaggtgac gcgcgctcca ccggcacgta
     4081 tcgggtcgcg cgtgtagcaa cggtcgagcc gcatggaccg agccggatcc tggtctgggc
     4141 gtcaggcaca gagcacggtg gcgcaggcgc ttgcgagggc gattccggcg gcccgatcac
     4201 gcgcgacgat gcaggcagcg tgttcgcgat cacgacatgg gcaacgggat tgaagggccg
     4261 cggctgtggc cagtattcgc aaggcgttct gctggcgccg cagcgcgcgt ggatcgatgc
     4321 gacgttggcg aagtggggcg gtagcgcgaa ctggcaatga acaaaaaaaa cgccccgaag
     4381 ccgaacggct cgggacgttt tgaggacgaa gcgtcgctta gcgcttcttc gaagtcgtcc
     4441 gacgggtcgt cttgcgagcc g
//
LOCUS       DATAIQ010000251         3947 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_105533, whole genome shotgun sequence.
ACCESSION   DATAIQ010000251 DATAIQ010000000
VERSION     DATAIQ010000251.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3947)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3947)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3947
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105533"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..435
                     /locus_tag="VHN20_04315"
     CDS             <1..435
                     /locus_tag="VHN20_04315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HEX2725027.1"
                     /translation="AYTFAADDIIRFARRFDPQDFHLDAEAGRRSHFGGLIASGWHTA
                     GAWMKLMVADIARASAAASARGERPAQLGPSPGFRDLKWLRPVYAGDTISYRATVLDK
                     RMSASRPGWGLLFHHNSGVNQRGEEVFSFRGAVFWERHTSRS"
     gene            complement(583..1128)
                     /locus_tag="VHN20_04320"
     CDS             complement(583..1128)
                     /locus_tag="VHN20_04320"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015933579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003999 - adenine
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0006168 - adenine salvage [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HEX2725028.1"
                     /translation="MDQRLVPDLKATIRTIPDYPKPGIRFRDITTLLGDPRAFRQAVD
                     ALARPFDGARIGKVAGIEARGFILGGAVAHQLAAGFVPIRKKGKLPHATVRIAYSLEY
                     GVDEMEMHADAIGQEERVLLIDDLIATGGTAVAATHLLRQIGAEVVAACFVIDLPELG
                     GADKLRALSVDVRTLVSFEGH"
     gene            1167..1358
                     /locus_tag="VHN20_04325"
     CDS             1167..1358
                     /locus_tag="VHN20_04325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725029.1"
                     /translation="MGEPQYRITIGDIDIPFGRLVAFFVKASLAAIPAALVVWLIFVV
                     LWGIAATIFGLAFVPRQAF"
     gene            complement(1428..2303)
                     /locus_tag="VHN20_04330"
     CDS             complement(1428..2303)
                     /locus_tag="VHN20_04330"
                     /EC_number="2.4.2.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018042316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017061 - S-methyl-5-thioadenosine
                     phosphorylase activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-methyl-5'-thioadenosine phosphorylase"
                     /protein_id="HEX2725030.1"
                     /translation="MTKAVLGVVGGSGVYDLPGLEDVREARIASPWGEPSDALRIGRI
                     GATEVVFLPRHGRGHQMSPSDINYRANIDVLKRAGVTDLVSVSACGSFKPELHPGLFV
                     LIDQVVDRTFRRETSFFGKGCVAHVSMAHPMGPRLQARIAAAAEAEGIAVHRGGSYVC
                     MEGPQFSSYAESMTYKGLGYDVIGMTNMPEAKLAREAEITYATVAMVTDYDCWHPEHG
                     AVEVADIIKVVMANADKAARLVARLARDFPAEHEPCPVRSDRALDTAIMTAPRFRDPA
                     LMHKLDAVAGRVLRA"
     gene            complement(2383..3279)
                     /locus_tag="VHN20_04335"
     CDS             complement(2383..3279)
                     /locus_tag="VHN20_04335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010682073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c1"
                     /protein_id="HEX2725031.1"
                     /translation="MTRITLLIAAAALGLATQARAAEDTPHPPRQPWSFAGVFGTFDR
                     AQLQRGFKIYRESCQNCHSLSRVYFRNLAQPGGPEFSEAQVRALAAEYKIKDGPNDAG
                     DMFERPGRAADRFPTPFPNEQAAAAANGGKAPPDLSVMAKARTYERGFPAFIFDALPI
                     PYVGMYQEQGADYVTALLNGYTEPEHGVEVPAGGHYNRYFPGHIIAMPKPLSDGQIEY
                     PKREDGKPVVPETTEQYARDVTAFLMWTAEPHLEQRKRLGFQVIGFLAFLAVLLFLTK
                     KKIWARVGGDPVGLLPEGEQRH"
     gene            complement(3299..>3947)
                     /locus_tag="VHN20_04340"
     CDS             complement(3299..>3947)
                     /locus_tag="VHN20_04340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018183736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cytochrome b"
                     /protein_id="HEX2725032.1"
                     /translation="ILHVWALHVPGNNNPTGIPIKSGKDAVPFHPYMTVKDSFAITVF
                     MILFAWWVFYMPNFLGHADNYIMANPAVTPAHIVPEWYFLPFYAILRAIPNKLGGVMA
                     MFGAIVVLALVPWLDTSKVRSAAYRPMYKWFFWIFVVTCIALGWLGAKPAEGNYVLFA
                     RIFTAYYFAHFLIVLPLLGLFETPTPMPNSIAESVLGKPVRSGDRPVVPVEAGAR"
BASE COUNT          609 a         1304 c         1401 g          633 t
ORIGIN      
        1 gcctacacct tcgcggccga cgacatcatc cgcttcgccc ggcgcttcga cccgcaggac
       61 ttccacctcg atgccgaggc cggccggcgc agccatttcg gcggcctcat cgcctcgggc
      121 tggcacaccg ccggcgcctg gatgaagctg atggtggccg acatcgcgcg cgccagcgcg
      181 gcggcgtcgg cgcgcggcga gcgcccggcg cagctcggcc cgtcgcccgg cttccgcgac
      241 ctcaagtggc tgaggcccgt ctacgccggc gacacgatca gctaccgcgc caccgtgctc
      301 gacaaacgca tgtccgcgtc gcgcccgggc tgggggctgc tgttccacca caacagcggc
      361 gtcaaccagc gcggcgagga ggtgttcagc ttccgcggcg ccgtgttctg ggagcgccat
      421 acgtcccggt cgtaacccaa ccgtcgtcat tccggggccg agcgcagcga ggagcccgga
      481 acccacgacc gggtgagacc gcgatcgcag cgttcacccg gtcatgggtt ccgggttctg
      541 ccttcggcag ccccggaatg acatcgggag gcaggtgcgc ggtcagtgcc cctcgaagct
      601 gacgagggtg cgcacgtcga cgctgagggc gcgcagcttg tcggcgccgc cgagctcggg
      661 caggtcgatg acgaagcagg cggcgaccac ctcggcgccg atctggcgca gcaggtgggt
      721 ggccgccacg gccgtgccgc cggtggcgat caggtcgtcg atcagcagca cgcgctcctc
      781 ctggccgatg gcgtcggcat gcatctccat ctcgtcgacg ccgtattcga gcgaataggc
      841 gatgcgcacg gtggcgtgcg ggagcttgcc cttcttgcgg atcggcacga agccggccgc
      901 gagctgatgc gcgacggcgc cgccgaggat gaagccgcgc gcttcgatgc cggcgacctt
      961 gccgatcctg gccccgtcga agggccgcgc cagcgcgtcg accgcctgcc ggaaggcgcg
     1021 cgggtcgccg agcagcgtgg tgatgtcccg gaaccggatc ccgggcttgg gataatcggg
     1081 gatggtccgg atcgtggcct tgagatcggg gacgagacgt tgatccatgg tggtgccttc
     1141 acgctgcgcc aggcaaggag aacccaatgg gcgaacctca ataccgcatc accatcggcg
     1201 acatcgacat cccattcgga cggctggtcg cttttttcgt caaggcctcg ctggcggcga
     1261 tcccggcggc gctggtcgtc tggctgatct tcgtggtcct gtgggggatc gcggcgacga
     1321 tcttcggact ggccttcgtg ccgcgccagg ctttctagac ccggctcaag ccttggttgc
     1381 cttgtctggc agatcgtctt cggcgaagcg gttcccactt cgccggatca tgcccgcagg
     1441 acccgccccg ccaccgcgtc gagcttgtgc atgagcgccg ggtcgcggaa gcggggcgcc
     1501 gtcatgatgg cggtgtcgag ggcgcggtcg gacctgaccg gacagggctc gtgctcggcc
     1561 gggaagtcgc gggcgagtcg cgccacgagg cgcgccgcct tgtcggcatt ggccatcacg
     1621 accttgatga tgtcggcgac ctcgacggcg ccgtgctccg ggtgccagca gtcgtagtcg
     1681 gtcaccatgg cgacggtcgc gtaagtgatc tcggcttcgc gggccagctt cgcctcgggc
     1741 atgttggtca tgccgatcac gtcgtagccg aggcccttgt aggtcatcga ctcggcgtag
     1801 ctcgagaatt gcggcccctc catgcacaca tagctgccgc cgcgatgcac ggcgatgccc
     1861 tcggcctcgg ccgccgcggc gatgcgcgcc tgcaggcggg ggcccatcgg atgcgccatc
     1921 gacacatgtg cgacgcagcc cttgccgaag aacgaggtct cgcgcctgaa ggtgcggtcg
     1981 acgacctggt cgatcagcac gaacaggccc ggatggagct ccggcttgaa ggagccgcag
     2041 gccgagacgg agacgaggtc ggtcacgccg gcgcgcttga ggacgtcgat attggcccgg
     2101 taattgatgt cggacggcga catctggtgg ccccgtccat gccgcggcag gaacacgacc
     2161 tcggtcgccc cgatgcggcc gatgcgcaac gcgtcggacg gctcgcccca gggcgaggcg
     2221 atgcgcgcct cgcgcacgtc ctcgaggccc ggcaggtcat agacgccgga gccgccgacg
     2281 acgccgagga cggccttcgt catggctgcg aatgacgaag ggcgaagggc gagttgggga
     2341 ctggcgctct actcaccatt cgcgactcgc catccgccgc ggtcagtgcc gctgctcgcc
     2401 ttcgggcagc aatccgaccg gatcgccgcc gacacgggcc cagatcttct tcttggtgag
     2461 gaagagcagc acggccagga aggcgaggaa gccgatcacc tggaagccca gccgcttgcg
     2521 ctgctcgaga tgcggctcgg cggtccacat caggaaggcc gtgacatccc tggcgtattg
     2581 ctccgtcgtc tcgggaacga ccggcttgcc gtcctcgcgc ttgggatact cgatctggcc
     2641 gtcgctaagc ggcttcggca tggcgatgat gtggccgggg aaatagcggt tgtagtggcc
     2701 gccggccggc acctcgacgc cgtgctccgg ctcggtgtag ccgttgagga gggcggtcac
     2761 gtaatccgcg ccctgctcct gatacatacc gacatagggg atcggcagcg cgtcgaagat
     2821 gaaggccggg aagccgcgct cgtaggtgcg cgccttggcc atcaccgaca ggtcgggcgg
     2881 cgccttgccg ccgttggcgg cggcggccgc ctgctcgttc gggaacggcg tcgggaaacg
     2941 gtcggcggcc cggcccggcc gctcgaacat gtcgccggcg tcgttcggac cgtccttgat
     3001 cttgtattcg gcggcgagcg cccggacctg cgcctcggag aattccggcc cgcccggctg
     3061 cgccaggttg cggaaataga cgcggctgag gctgtggcag ttctggcagc tctcccgata
     3121 gatcttgaag ccgcgctgca gctgggcccg gtcgaacgtg ccgaacacgc cggcgaagct
     3181 ccacggctgg cgcggcgggt gcggcgtgtc ttcggccgcc cgggcttgtg tcgcgagccc
     3241 gagggcggcg gcggcgatga ggagggtgat ccgtgtcatg gcgtgtttca tcgttccgtc
     3301 agcgcgcccc tgcctcgacc ggcaccaccg gccggtcgcc gctgcgcacc ggcttgccga
     3361 gcaccgactc ggcgatcgag ttcggcatcg gcgtcggcgt ctcgaacagg ccgagcagcg
     3421 gcaggacaat caggaagtgg gcgaagtaat aggccgtgaa gatccgcgcg aacagcacgt
     3481 aattgccttc cgccggcttg gcgccgagcc agccgagggc gatgcaggtg acgacgaaga
     3541 tccagaagaa ccacttgtac atcgggcggt aggccgccga gcgcaccttc gaggtgtcga
     3601 gccacggcac cagcgccagc acgacgatgg cgccgaacat cgccatgacg ccgccgagct
     3661 tgttggggat ggcgcgcagg atcgcgtaga acggcaggaa ataccattcc ggcacgatat
     3721 gcgcgggggt cacggccggg ttggccatga tgtagttgtc ggcgtggccg aggaaattcg
     3781 gcatgtagaa cacccaccac gcgaacaaga tcatgaatac cgtgatggcg aagctgtcct
     3841 tcacggtcat gtacgggtgg aacggcaccg cgtccttgcc cgacttgatc gggatgccgg
     3901 tcgggttgtt gttgcccggc acgtgcagcg cccagacgtg caggatc
//
LOCUS       DATAIQ010000252         4332 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_290484, whole genome shotgun sequence.
ACCESSION   DATAIQ010000252 DATAIQ010000000
VERSION     DATAIQ010000252.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4332)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4332)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4332
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_290484"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1629
                     /locus_tag="VHN20_04345"
     CDS             <1..1629
                     /locus_tag="VHN20_04345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012334250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2725033.1"
                     /translation="MTAPLLSVRDLSVAFRQGGRDMLAVDRVSFDVMPGETVALVGES
                     GSGKSVSALSVLKLLPYPAAHHPSGEILFKGRDLMRASEDEMRSVRGDDITMVFQEPM
                     TSLNPLHTVEQQVGEIVKLHRGLSDRDARARTLELLDLVGVREAESRLGAYPHQLSGG
                     QRQRVMIAMALANEPDLFIADEPTTALDVTVQAQILKLLAELKTRLGMAMLFITHDLG
                     IVRKIAERVCVMTNGKIVEQGAVAEVFSNPRHPYTQKLLAAEPKGRANPVPAGAPTIV
                     EAGPVKVWFPIKRGFLRRTVGHIKAVDGITIRVREGETVGVVGESGSGKTTLGLAILR
                     LIASEGPIVVLGKRVDGLPSRAIRPMRKNMQVVFQDPYGSLSPRLSVAEIVEEGLLVQ
                     DKGLDYRARREVVAAALRDVGIDPAAMDRYPHEFSGGQRQRIAIARAMALEPKFIMLD
                     EPTSALDMSVQAQIVELLRDLQKRRNLAYMFISHDLKVVRALANHVLVMKDGRIVEEG
                     AAERIFAEPQTAYTRALFAAAFNLETAAADVVRE"
     gene            1626..3008
                     /locus_tag="VHN20_04350"
     CDS             1626..3008
                     /locus_tag="VHN20_04350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006205340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cystathionine beta-synthase"
                     /protein_id="HEX2725034.1"
                     /translation="MTKPAGSVLDLIGNTPLVEVTRFDTGPCRLFLKLESANPSGSLK
                     DRPARAMIEAAEASGTLREGGTVVEAPAGNTGVGLALVASRKGYRTVLVVPDKMSREK
                     IMHARALGAEVVMTRSDVGKGHPDYYQDVAQAIADRTPGAFYVNQFANPANPASHRMT
                     TGPEILSQMQGKVDAVVVGVGSGGTLTGIGRHMREASPETEMVLADPAGSILAPYIET
                     GVMGEAGSWAVEGIGEDFVPPNCDLSLVRKAYSVEDSESFAAARDLLRKEGILAGSSS
                     GTLLAAALLYCREQSAPKRVVTLVCDSGAKYLSKVFNDAFIAQEGWLGRPLTGTVRDV
                     VINRFDEGAEIFVQPDETVQSAFARMRAADISQLPVIEEGRVVGLVDESDLLDAFVMA
                     GADMSAVFRKPVREVMVTRLETISADAPVTELVPLFARGLVPLVMDGGAFLGLVTRID
                     LINYFRVRNR"
     gene            3005..4165
                     /locus_tag="VHN20_04355"
     CDS             3005..4165
                     /locus_tag="VHN20_04355"
                     /EC_number="2.5.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006205341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019346 - transsulfuration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cystathionine gamma-synthase"
                     /protein_id="HEX2725035.1"
                     /translation="MTRSNQLAFDTRCIHAGQEPDPTTGAVMTPIYATSTYAQTSPGV
                     HKGYEYARTHNPTRMAFERCIADLENGSAAFAFGSGLAATATALDLLDHGAHIVASDD
                     LYGGTRRLFEKVRRRSAGLDVTYVDFTRADALEAALRPSTRLVWVETPTNPLLKLVDL
                     EAVAAVARRRGVWIAADNTFASPYVQRPLEYGFDMVVHSATKYLNGHSDIVGGVVVVG
                     HNGDLRDRLAFLQNAVGAISGPFDSFLANRGLKTLALRMERHCSSALRIAEFLLGHPR
                     VGRVIYPGLSSHPQHALARRQMRGFGGIVTARIDGGLDAARRFLERCRLFTLAESLGG
                     VESLIEHPAIMTHASVPPEVRASLGIDDGLVRLSVGIEDADDLIADLRSALE"
     gene            4180..>4332
                     /locus_tag="VHN20_04360"
     CDS             4180..>4332
                     /locus_tag="VHN20_04360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012317819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopentomutase"
                     /protein_id="HEX2725036.1"
                     /translation="MPRALLIVLDSVGIGGAEDAAVYGDVGADTLGHIAEACARGEGD
                     RADLRQG"
BASE COUNT          676 a         1487 c         1441 g          728 t
ORIGIN      
        1 atgaccgccc ccctcctctc cgtccgcgac ctctcggtcg ccttccgcca gggcgggcgc
       61 gacatgctcg cggtcgaccg cgtctccttc gacgtgatgc ccggcgagac ggtggcgctc
      121 gtcggcgaat ctggctccgg caagtcggtg tcagcgctct cggtcctgaa gctcctgccc
      181 tacccggcgg cgcaccaccc ctcgggggag atcctgttca agggccgcga cctgatgcgc
      241 gcctccgagg acgagatgcg cagcgtgcgc ggcgacgaca tcaccatggt gttccaggag
      301 ccgatgacct cgctcaaccc gctgcatacg gtcgagcagc aggtcgggga gatcgtcaag
      361 ctgcatcgcg gcctgtccga ccgtgatgcg cgcgcccgca cgctcgagct gctcgatctc
      421 gtcggtgtcc gcgaagcgga aagccggctc ggcgcgtatc cgcatcagct ttcgggcggc
      481 cagcgccagc gcgtgatgat cgccatggcg ctcgccaacg agccggacct tttcatcgcc
      541 gacgagccga cgacggcgct cgacgtcacc gtgcaggcac agatcctgaa attgctcgcc
      601 gagctcaaga cccgcctcgg catggcgatg ctgttcatca cgcatgacct cggcatcgtg
      661 cgcaagatcg ccgagcgggt gtgcgtgatg acgaacggca agatcgtcga gcaaggtgct
      721 gtcgcggagg tgttttccaa tcctcgccac ccgtatacgc aaaagctcct cgccgccgag
      781 ccgaagggcc gcgccaaccc cgtgcccgcc ggcgcgccga caatcgtcga ggcgggcccg
      841 gtcaaggtgt ggttcccgat caagcgcggc ttccttcgcc ggacggtcgg ccacatcaag
      901 gccgtcgacg gcatcacgat ccgcgtgcgc gaaggcgaaa cggtcggcgt cgtcggcgaa
      961 tccggctcgg gcaagacgac gctcggtctc gccatcctgc gcctgatcgc ctccgagggc
     1021 ccgatcgtcg ttctcggcaa gcgtgtcgac ggcctgccct cgcgcgccat ccgaccgatg
     1081 cgcaagaaca tgcaggtggt gttccaggac ccatacggct cgttgtcgcc gcgcctttcg
     1141 gtcgccgaga tcgtcgagga gggcctgctc gtgcaggaca agggactcga ttatcgggcc
     1201 cggcgcgagg tcgtggccgc agcgctgcgc gacgtcggca tcgaccccgc cgccatggac
     1261 cgctatccgc acgagttttc cggcggccag cgccagcgca tagccatcgc ccgcgccatg
     1321 gcgctggagc cgaaattcat catgctcgac gagccgacct cggcgctcga catgtctgtg
     1381 caggcgcaaa tcgtcgagct gttgcgcgac ctgcagaagc ggcgcaatct cgcctacatg
     1441 ttcatcagcc atgacctgaa ggtagtgcgc gccctcgcca atcatgtgct tgtcatgaag
     1501 gatggacgca tcgtcgagga gggcgcggcc gagcgcattt tcgctgagcc gcagaccgcg
     1561 tatacgcgcg cgctgttcgc cgccgccttc aacctggaga ccgccgcagc cgacgtggtg
     1621 cgcgaatgac gaagccggca gggagcgtcc tcgacctgat cggcaacacg ccgctcgtcg
     1681 aggtcacgcg tttcgacacc ggcccgtgcc gcctgtttct caagctcgag agcgctaatc
     1741 cgagcggctc gctcaaggac cgcccggctc gtgctatgat cgaggcggcc gaggcgagcg
     1801 ggacccttag ggagggcggc acggttgtcg aggcacccgc cggcaacacc ggcgtcgggc
     1861 tggcgctggt cgcctcgcgc aagggctacc gtaccgtgct cgtggtgccc gacaagatgt
     1921 cccgcgaaaa gatcatgcat gcccgcgcgc tcggcgccga ggtcgtgatg acgcgatccg
     1981 acgtcggcaa ggggcatccc gattattacc aggacgtggc gcaggcgatc gccgacagga
     2041 cgcccggggc tttctacgtc aaccagttcg ccaaccccgc caatccggcc tcgcaccgga
     2101 tgaccacggg gccggagatc ctttcccaga tgcagggcaa ggtcgacgcc gtcgtggtcg
     2161 gcgtcggctc gggcggcacc ctgaccggga tcggccgcca tatgcgcgaa gcctcgcccg
     2221 aaaccgagat ggtgctggcc gatcccgccg gctcgatcct cgcgccgtat atcgagaccg
     2281 gcgtcatggg cgaagccggc tcgtgggcgg tggaggggat cggcgaggac ttcgtgccgc
     2341 cgaactgcga tctttcgctc gtgcgcaagg cctattcggt cgaggactcg gagagcttcg
     2401 cggcggcgcg cgacctcctg cgcaaggaag gcatactcgc cggctcgtcg tcgggcacgc
     2461 tgttggcggc ggccttgctc tattgccgcg agcagagcgc tccgaagcgc gtcgtgacgc
     2521 tcgtttgcga cagcggcgcc aaatatctct cgaaggtctt caacgacgcc ttcatcgcgc
     2581 aggaggggtg gctcggccgg ccgctgaccg gcacggtgcg cgacgtggtc atcaaccgct
     2641 tcgacgaagg ggccgaaatc ttcgttcagc cagacgaaac cgtgcagtcg gccttcgcgc
     2701 gcatgcgcgc cgccgacatc tcgcagctgc ccgtgatcga ggaggggcgc gtcgtgggtc
     2761 tcgtcgacga gagcgatttg ctcgacgcct tcgtcatggc cggcgcggac atgtcggccg
     2821 tgttcaggaa acctgtccgc gaggtgatgg tgacgcgtct cgagacgatc tccgcggatg
     2881 ccccggtcac cgagctggtt ccgctgtttg cgcgcggtct cgtgccgctc gtgatggacg
     2941 ggggcgcatt tctcggcctc gtcacgcgca tcgatctgat caactatttc cgggttcgca
     3001 acagatgacg cgaagcaatc aactcgcctt cgacacgcgc tgcatccatg ccggccagga
     3061 gccggatccg acgacgggcg ccgtgatgac gccgatctac gccacttcca cttacgcgca
     3121 gaccagcccc ggcgtgcaca agggttacga atacgcgcgc acgcacaacc cgacgcgcat
     3181 ggccttcgag cgctgcatcg ccgacctcga gaacggctcg gcggctttcg ccttcggctc
     3241 gggcctggcc gccactgcga ccgcgctcga cctgctcgac cacggcgcgc atatcgtcgc
     3301 ttccgacgac ctctacggcg gcacgcggcg gctgttcgaa aaggtgcggc ggcgttcggc
     3361 cggcctcgac gtcacctatg tcgacttcac gagggccgac gcgctggaag ccgccttgcg
     3421 gccgagcacc cgcctcgtct gggtcgagac gccgacgaac ccgctcctga agctcgtcga
     3481 cctcgaagcc gtggcggcgg tcgcgcgccg gcgcggcgta tggatcgccg ccgacaacac
     3541 ctttgccagc ccgtacgtgc agcggccgct cgaatacggc ttcgatatgg tggtccattc
     3601 ggccaccaaa tatctcaacg gccattccga catagtcggc ggcgtcgtcg ttgtcggcca
     3661 taacggcgat ctgcgcgacc ggctcgcatt cctgcagaac gccgtcggcg cgatctccgg
     3721 gccgttcgac agcttccttg ccaaccgcgg cttgaaaacg cttgccttgc gcatggagcg
     3781 tcactgcagc tcggcgctgc gcatcgcgga gttcctgttg gggcatccgc gcgtcggccg
     3841 ggtgatctat ccggggttgt cgtcgcatcc gcagcatgcg ctggcgcgtc ggcagatgcg
     3901 cggcttcggt ggcatcgtga cggcgcgcat cgacggcggc cttgacgccg ccaggcgctt
     3961 tctcgagcgc tgccgcctct tcaccctcgc cgaaagcctt ggcggcgtcg aaagcctgat
     4021 cgagcatccc gccatcatga cgcacgcgtc ggttcctccg gaggtgcggg cgtcgctcgg
     4081 catcgatgac ggcctcgtgc gcctgtcggt cggtattgag gacgccgatg atctgatcgc
     4141 ggatctgcgg agcgctttgg aatgacgaaa gctgtttgaa tgccgcgcgc gctcctgatc
     4201 gtgctcgact cggtaggcat cggcggcgcg gaggatgccg cggtctacgg cgatgtcggc
     4261 gccgacacgc tggggcacat cgccgaggcg tgcgcgcgcg gggagggcga ccgtgccgac
     4321 ctgcgccagg ga
//
LOCUS       DATAIQ010000253         1933 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_13423, whole genome shotgun sequence.
ACCESSION   DATAIQ010000253 DATAIQ010000000
VERSION     DATAIQ010000253.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1933)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1933)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1933
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_13423"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1..1574
                     /gene="thrS"
                     /locus_tag="VHN20_04365"
                     /pseudo
     CDS             1..1574
                     /gene="thrS"
                     /locus_tag="VHN20_04365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009489451.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004829 - threonine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006435 - threonyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="threonine--tRNA ligase"
     gene            complement(1641..>1933)
                     /locus_tag="VHN20_04370"
     CDS             complement(1641..>1933)
                     /locus_tag="VHN20_04370"
                     /inference="COORDINATES: protein motif:HMM:NF018294.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF1127 domain-containing protein"
                     /protein_id="HEX2725037.1"
                     /translation="SLRSRAKRPRRTAAPRRGIVCATKWSANMHGTLPAVASRGPTRT
                     GWVSWLSRCLVRARERRLLSGLDDDQLKDIGLTRADVARECGRWPWDGRPRD"
BASE COUNT          336 a          637 c          670 g          290 t
ORIGIN      
        1 ttcgcgacaa gggcgagaat ttcaaggtcg agctcgtcga tgcgatcccc gaaggcgagg
       61 acctgaagat ctatcggcag ggcgagtggt tcgacctgtg ccgcggcccg cacatgacgt
      121 cgaccggcaa gatcggcaac gccttcaagc tcatgaaggt ggccggcgcc tattggcgcg
      181 gcgacgcgcg caatccgatg ctgacgcgca tctacggcac cgcctgggcg agcgacgacg
      241 acctcaaggc gtatctgacg cagctcgagg aagccgagaa gcgcgaccac cgccgcctcg
      301 ggcgcgagat ggacctgttc cattgccagg aggaggggcc gggcgtcgtg ttctggcacc
      361 cgaagggctg gaccctgttc caggagctgg tcgcctatat gcggcgccgg ctgaagggcg
      421 attatcagga ggtcaacgcc ccgcagattc tcgacaaggc cctgtgagaa acctccggcc
      481 actgggagtg gtaccgggag aacatgttcg tcacgaagac cgaggacgag cgcgagttcg
      541 cgatcaagcc gatgaactgc ccgggccacg tgcagatctt caagcatggc ctgaagtcgt
      601 accgcgacct gccgctgcgg ctcgccgagt tcggcgcggt gtcgcgctac gagccgtccg
      661 gcgcgctgca cgggctgatg cgcgtgcgcg ccttcacgca ggacgacgcg catgtcttct
      721 gcaccgagga ccagctcgcc gacgagtgcc tgatgatcaa cgacctgatc ctctcgacct
      781 atgccgattt cggcttcgag gacatcgtcg tgaagctgtc gacgcggccg gagaaacggg
      841 tcggcacgga cgccatgtgg gatcacgccg aagaggtgat ggcgcgcgtg ctcgagcaga
      901 tcgcggcgcg ctcgggtggg cgcatcagga cgagcgtcaa tccgggcgag ggcgccttct
      961 acgggcccaa attcgaatac gtgctgcgcg acgccatcgg ccgcgactgg cagtgcggca
     1021 cgacgcaggt cgacttcaac ctgccggagc gcttcggcgc cttctacgtc gaccacgacg
     1081 gccagaagaa gacgccggtg atggtgcacc gcgccatctg cgggtcgatg gagcgcttcc
     1141 tcggcatcct gatcgagcat ttcgcgggcc atttcccgct gtggctcgcg cccgtgcagc
     1201 tggtgatcgc aacgatcacg tcggaggccg acgcctatgc tgccgaggtc gccgccatgg
     1261 cggaccgggc cggactgcgc gtcgcgaccg acctgcgcaa tgagaagatc aactacaagg
     1321 tccgcgagca ctcgctcgcc aaggtccctg tgctgctggt gctgggcaag cgcgaggccg
     1381 ccgagcgcac cgtgaacatg cgtcgcctcg gcagccagga gcagcggtcg atggggctcg
     1441 acgaggcgat cgcagcgctc gcgcgcgagg cgcagccggc ggacgtcgcc cgggcgcgca
     1501 aagcgaccgg ggccgaaccg gaccagcacc tcacgctcga cgggcatcac gtcgtcgcgc
     1561 gcaccgccgt gtgaaaggcg cgaacggcga gcggcgaatg gaaagcctct ttggacggca
     1621 tttgccattc gtctcgccgg tcaatcccga gggcggccgt cccacggcca gcgaccgcat
     1681 tcgcgcgcca cgtcggcgcg cgtcaggccg atgtccttga gctgatcgtc gtcgagtccg
     1741 ctgagcagcc ggcgctcgcg cgcacgcaca aggcaccgcg ataaccagct gacccagccg
     1801 gtcctggtgg gcccgcgtga ggcgacggcc ggcaatgtcc catgcatgtt tgcgctccat
     1861 ttggtggcgc aaacgatgcc gcggcgcggc gccgccgtcc tgcgcggtcg cttcgcccgg
     1921 gagcgaagcg atc
//
LOCUS       DATAIQ010000254         7362 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_428584, whole genome shotgun sequence.
ACCESSION   DATAIQ010000254 DATAIQ010000000
VERSION     DATAIQ010000254.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 7362)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7362)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7362
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_428584"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..980)
                     /locus_tag="VHN20_04375"
     CDS             complement(<1..980)
                     /locus_tag="VHN20_04375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009489268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /protein_id="HEX2725038.1"
                     /translation="MLLVPTTPLADPPGRRPGLVATFRRLSPYLWPHGRTDLQRRVIL
                     AFGLLLVAKLVTVVAPFTFKWATDALVAVTGNANTAPDAAGVDWIWRAPILLTVLYGL
                     ARIAMAVLTQVRDGLFAKVAMHAVRQLALRTFEHMHRLSLRFHLERKTGGLTRVLERG
                     RNGIEELTRLFTLQLIPTIVEFVLVLGILAYEFTWHYSAVVLAMVIVYLAYTYKATEW
                     RISIRQRMNESDVDANTKAVDSLLNYETVKYFGAEARETQRYDLSMERYEKASTQTYT
                     SLAVLNAGQAVIFTIGMTLIMALTARDIMAGRATIGSFVLVNAMLIQLYIP"
     gene            complement(1080..2345)
                     /locus_tag="VHN20_04380"
     CDS             complement(1080..2345)
                     /locus_tag="VHN20_04380"
                     /inference="COORDINATES: protein motif:HMM:NF013630.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HEX2725039.1"
                     /translation="MTVDGRLGRIAVVVLGLIAFGGAVAWFGMVRPHMRDAPQPIAFA
                     PKLQVGTQAARDKTAAESGQPAAPSFDVVRVEPSGETVIAGRGAPGAAIELLRDGKSY
                     FRDVADASGLFALVPPPLPPGSHDIVLQATAPDGTRLLSRQSVTVVIDAKRRRQPLVT
                     LTSPDRPTVVLSRPQPDAEMAAAPASVPAAAAGAAVAPKAAGAPPPGARQAVKIVTVE
                     AEDGGRLFVSGNAAPGATVRLYLNETFIAPGGAGADGALSFAIGRGVRPGDYRVRLDD
                     VDPASGDVRSRAEVNFNVPATLAVAAGQAPAGGPAGHGGAAPQTAAAVRAQPAGATAP
                     GVGSNAPPAATASLAGVPPAAPASAVVVPEVSTTMVGRGDNLWRISKRVYGQGTRYTV
                     IYDANQAQIRNPRFIYPGQVFVVPPERPR"
     gene            2459..3100
                     /locus_tag="VHN20_04385"
     CDS             2459..3100
                     /locus_tag="VHN20_04385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009489265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
                     /protein_id="HEX2725040.1"
                     /translation="MRYESNFDARVEPAAADISTICVYCGSGAGNAPAFLESAVALGH
                     AVAEEGIGLVYGGGNIGLMGAVAHAVLERGGHVTGIIPDFLTARERLLEEVQETIVVP
                     DMHSRKRLMFEKADAFVALPGGIGTLEELVEQMTWAQLGQHSKPILLVNINGFWKPLL
                     VLLAHMREQGFIRPGLELSYLVAERVEDVIPMLRDAARRRGIAANTQLIEERF"
     gene            3323..3709
                     /locus_tag="VHN20_04390"
     CDS             3323..3709
                     /locus_tag="VHN20_04390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725041.1"
                     /translation="MITRPLLTLACLALLAAPAAAQTTTGAMPDDPAAAAAPAKKMRA
                     KTPRPAQFVTLTNATAQTAREVVIMAEDQTAKLAKPLAPKAKTTMKMPKIKGCMVSVA
                     AVFEGEGQVDIGDFDICKEKTIRFTE"
     gene            complement(3837..4295)
                     /locus_tag="VHN20_04395"
     CDS             complement(3837..4295)
                     /locus_tag="VHN20_04395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725042.1"
                     /translation="MSEDKRKKGGRLTDFYLVFFAIFLIVAAVMTSLDIITLIGIGVP
                     ANRKYVAGEGWVVTLIFMAIGFAGTWFILYHRGWRLRDYMMFLAIIASGMFACMFLLM
                     LVHSAIAKPLASFFDDEWAGRIEAMITALIIGTMTATGVRFLRSRGWIEE"
     gene            complement(4596..6194)
                     /gene="cimA"
                     /locus_tag="VHN20_04400"
     CDS             complement(4596..6194)
                     /gene="cimA"
                     /locus_tag="VHN20_04400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043714 - (R)-citramalate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="citramalate synthase"
                     /protein_id="HEX2725043.1"
                     /translation="MSARERLYLFDTTLRDGAQTTGVDFSLEDKRTIATLLDRLGIDY
                     VEGGYPGANPLDTDFFAEKRTQRAKFTAFGMTKRAGRSAANDPGVAALLDARADAICF
                     VAKAWDYHVRVALETTPEENLDGIRESVKAALARGREVIVDCEHFFDGYKADPGYALA
                     CAKTACDAGARWIVLCDTNGGTLPHEVAGIVAEVTRHVPGERLGIHAHDDCGCAVANS
                     LAAVEAGARHIQGTLNGLGERCGNANLVTLIGTLKLKNGYDQRFETGVSDEALGTLTQ
                     AAHMLDELLNRAPDRHAPFVGASAFATKAGIHASAVLKDPRTYEHVAPELVGNMRKVL
                     VSDQAGRSNILAAMQRVGIDLPKDDARVGRVLDEVKRKEAEGYAFESADASFYLLVKR
                     VLGEVPDFFDVERFSVKVERRHNAVGALVTVAEAIVKVKVGDEVLISAAEGNGPVNAL
                     DVALRKDLGKYQDLIADLELVDYKVRIYQGGSDAVTRVLIESGDETGARWTTIGVSPN
                     IIDASFQALSDSINYKLLKSGAKA"
     gene            complement(6191..6685)
                     /locus_tag="VHN20_04405"
     CDS             complement(6191..6685)
                     /locus_tag="VHN20_04405"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006609154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX2725044.1"
                     /translation="MTPALRPFLPADAPVLAAIYQASIEELTGEDYSPAQQAAWAAEA
                     DDEAEFAGRLARGLTLVATVAGAPVGFATLQGTDHIDLLYVHPSAAGQGVAALLIDAL
                     EKLAQARGATRLDADVSDTARGFFEKRGFTAERRNTVALGDEWLGNTTMQKRFGTAGG
                     KGRS"
     gene            complement(6888..>7362)
                     /locus_tag="VHN20_04410"
     CDS             complement(6888..>7362)
                     /locus_tag="VHN20_04410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HEX2725045.1"
                     /translation="WPGDVLRFAMLRTHYRQPIDWTVRALEEAEQTLASWTALAEFGE
                     ATGAELAPEVLDALTDDLNTPKAIVELHALERRGERKALAASLHALGFTTPLRRAISI
                     APEVASKVEDLISVRRTARATRNWAESDRIRDELKAMGIVLHDNKDGTTTWEVAP"
BASE COUNT         1172 a         2504 c         2514 g         1172 t
ORIGIN      
        1 gggatgtaga gctggatcag catggcgttg accagcacga agctgccgat ggtggcgcgc
       61 ccggccatga tgtcgcgcgc cgtcagcgcc atgatcagcg tcatgccgat ggtgaagatc
      121 accgcctggc cggcattgag cacggcgagc gaggtgtagg tctgcgtcga cgccttctcg
      181 tagcgctcca tcgacaggtc atagcgctgc gtctcgcgcg cctcggcgcc gaaatatttg
      241 accgtctcgt agttgagcag cgagtcgacc gccttggtat tggcgtcgac gtcggactcg
      301 ttcatgcgct ggcggatcga gatccgccat tccgtcgctt tgtaggtata ggcgaggtag
      361 acgatcacca tggccagcac gacggccgaa tagtgccacg tgaactcata ggccaggatg
      421 ccgagcacga gcacgaactc gacgatcgtc gggatcagct gcagcgtgaa aagccgcgtc
      481 agctcctcga tgccgttgcg gccgcgctcg agaacgcgcg tcagcccgcc ggtcttgcgc
      541 tcgaggtgga agcgcaagga caggcgatgc atgtgctcga aggtgcgcag ggccagctgc
      601 cgcaccgcat gcatggcgac cttggcgaac agcccgtcgc gcacctgcgt cagcaccgcc
      661 atggcgatgc gcgcgagacc gtagagcacg gtcagcagga tcggcgcgcg ccagatccag
      721 tcgacgcctg cggcgtcggg cgccgtgttg gcgttgccgg tgaccgcgac gagcgcgtcg
      781 gtggcccatt tgaaggtgaa cggcgccacc accgtgacga gcttggccac cagcagcagc
      841 ccgaaggcga gaatcacgcg ccgctgcagg tccgtgcgcc cgtgcggcca cagatacggc
      901 gagagcctgc ggaaggtggc gacgaggccg ggacgccgcc ccggcgggtc cgcgagaggc
      961 gtcgtgggaa cgagcagcat tcaggaatcc gaaaaaacgc gtggtttcac cgatataggc
     1021 gatcacgcgc cgcgttgcag caggcgcgcg ccttttcccg agatcaatgg atcgagtgat
     1081 cagcgcgggc gttcaggcgg cacgacgaag acctggccgg gatagatgaa gcgcgggttg
     1141 cggatctgcg cctggttggc gtcgtagatc accgtgtagc gcgtgccctg cccgtagacg
     1201 cgcttgctga tgcgccacag gttgtcgccg cgcccgacca tggtcgtgct gacctccggg
     1261 accacgacgg cggatgcggg agcggcgggt ggcactccgg cgagcgaggc ggtggcagcc
     1321 ggaggcgcgt tgctgccgac accgggcgca gttgcgcccg cgggctgcgc tctgacagca
     1381 gcggcggtct gcggcgcggc gccgccgtgc ccggcagggc ccccggccgg cgcttgcccg
     1441 gccgcgacgg cgagcgtcgc ggggacgttg aagttcacct cggcgcgcga tctgacgtca
     1501 cccgacgccg ggtcgacatc gtcgagccgc acgcggtaat cgcccgggcg cacaccgcgg
     1561 ccgatcgcga aggaaagcgc cccgtcggcg cccgcgccgc ccggggcgat gaaggtctcg
     1621 ttgagataga gccgcaccgt cgcgcccggc gccgcattgc ccgacacgaa caggcgcccg
     1681 ccgtcttccg cctcgaccgt gacgatcttg acggcctgcc gcgcaccggg agggggggcg
     1741 ccggcggcct tcggcgcgac cgccgcgcct gccgcggccg ccgggaccga tgcgggagcg
     1801 gccgccatct cggcgtcggg ctgcgggcgc gacagcacga ccgtcggccg gtctggcgag
     1861 gtcagcgtca ccagcggctg cctccggcgc ttcgcgtcga tcaccacggt cacgctctgg
     1921 cgcgacagca ggcgcgtccc gtccggcgcg gtcgcctgca gcacgatgtc atgcgacccg
     1981 ggcggcagcg gcggcggcac gagcgcgaac aggcccgacg catccgctac gtcgcggaaa
     2041 tagctcttgc cgtcgcgcaa cagctcgatg gcggcgcccg gcgcgccgcg gccggcgatc
     2101 acggtctcgc cgctcggctc gacgcgcacc acgtcgaacg agggcgcggc cggctgcccg
     2161 gattccgcgg ctgtcttgtc gcgcgcggcc tgcgtcccca cctgcagttt cggcgcgaat
     2221 gcgatgggct gcggcgcgtc gcgcatgtgt ggccgcacca tcccgaacca cgcgacggcg
     2281 cccccgaagg cgatcagccc caggaccaca acggcgattc tgcccaggcg tccgtccacc
     2341 gtcacgacga tctcccgaca ggcctctcga ccggccgctc catctgtcct tcgatgaaac
     2401 ccttgattcc ttggaccttg ccctattgta ggccgtttat ccgtggatag gctatcttat
     2461 gcgatacgag tcgaattttg acgcccgggt cgaacccgcg gccgccgata tttccacgat
     2521 ctgcgtctat tgcggctccg gggcgggcaa tgccccggca ttcctggaga gcgccgtcgc
     2581 gctcggccac gccgtcgccg aggaaggcat cggtctcgtc tatggcggcg gcaatatcgg
     2641 tctgatgggc gccgtggcgc atgcggtgct cgaacgcggt ggccacgtca ccggcatcat
     2701 cccggatttc ctcacggccc gcgagcggct cctcgaggag gtgcaggaga cgatcgtcgt
     2761 ccccgatatg cacagccgca agcgcctcat gttcgagaag gcggacgcct tcgttgccct
     2821 tcccggcggc atcggcacgc tcgaggagct cgtcgagcag atgacctggg cgcagctcgg
     2881 ccagcacagc aagccgatcc tgctcgtcaa tatcaacggc ttctggaagc ccctgctcgt
     2941 gctgctggcg catatgcgcg agcagggttt catccggccg gggctggagc tgagctatct
     3001 cgtggcggag cgcgtcgagg acgtcatccc gatgctgcgg gacgccgccc ggcggcgcgg
     3061 catcgccgcc aacacccagc tgatcgagga gcgtttctga accccgcccg gtgccgccgc
     3121 atcgccagcg cctagccgac gaggagcgtt tctgacacac cgggcagccg cggcatcgcc
     3181 gccagcgccc agccgatcga ggagcgtttc tgacacaccg ggcggcatcc ttccgatgcc
     3241 ttcccgattc gatctgggat tctccgcggc gggggtctag cgtcggccgg ccgaatcgct
     3301 tgcccgacgc tccggaggtc ccatgattac ccgtccgctc ctcaccctcg cctgcctggc
     3361 gctgctcgcc gcgccggccg ccgcgcagac caccaccggc gccatgccgg atgacccggc
     3421 cgccgcggcc gcgccggcca agaagatgcg cgccaagacc ccacgcccgg cgcagttcgt
     3481 gacgctcacg aacgccaccg cgcagacggc ccgcgaggtc gtgatcatgg ccgaggatca
     3541 gaccgcgaag ctggcgaagc cgctcgcgcc caaggccaag acgacgatga aaatgcccaa
     3601 gatcaagggc tgcatggtgt cggtcgcggc cgtgttcgaa ggcgaaggcc aggtcgatat
     3661 cggcgacttc gacatctgca aggaaaagac catccgcttc acggagtgag cgcacgctct
     3721 cccggacggg agagggtcgg catcgcgcag cgatgccgag gacggatgga cgtctccgaa
     3781 ccgagcgcga cgacgacgtt gcgtggtgcg ttgctttcag cgccaatcta ggcgctttat
     3841 tcctcaatcc agccgcgaga cctcaggaac cggacgccgg ttgccgtcat cgtgccaatg
     3901 ataagcgcgg tgatcatagc ctcgatgcgg ccagcccatt cgtcgtcaaa aaagctggcg
     3961 aggggcttgg cgatagccga gtgcaccagc atcagcagga acatgcatgc gaacattcct
     4021 gacgctatga ttgccaggaa catcatgtag tcccggaggc gccagccacg gtgatagagg
     4081 atgaaccagg tgcccgcgaa accgatcgcc atgaagatca gggttacgac ccaaccctcg
     4141 cccgctacgt atttgcggtt ggccggcaca ccgatgccga taagagtgat gatgtcgaga
     4201 cttgtcatca cggctgcaac gatgaggaaa atagcgaaga acaccaggta gaagtctgtc
     4261 aggcggccgc cctttttccg tttgtcctca ctcatcccgc gcactcgaac agagacgatg
     4321 tcctccaaca cggtcgaaag gcgcggctag gacaacgtgc ggctgcacga gtgacgggtg
     4381 gcctaccctc catcaccatc acgtcggtca ttccggggct cgcgaagcga gagcccggaa
     4441 cccacgaccg ggtgagacgt caatggcagc gccgcagccg tgggttccgg gttcggcgct
     4501 acgcgccgcc ccggaatgac acgagttttt attttgtaag gcagcgaggt tcggcgttac
     4561 gcggcgcccc ggtatgacga agtttgtgtt agggctcacg ccttcgcgcc gctcttgagc
     4621 agcttgtaat tgatcgagtc ggagagggcc tggaacgagg cgtcgatgat gttcggcgag
     4681 acgccgatgg tggtccagcg cgcgccggtc tcgtcgccgg attcgatcag gacgcgcgtg
     4741 accgcgtcgg agccgccctg gtagatgcgc accttgtagt cgacgagctc gaggtcggcg
     4801 atcaggtcct ggtatttgcc aaggtccttg cgcaaggcga cgtcgagcgc gttgaccggg
     4861 ccgttgcctt ccgccgccga gatcagcacc tcgtcgccga ccttcacctt gacgatcgcc
     4921 tcggcgacgg tgacgagcgc gccgacggcg ttgtggcgcc gctcgacctt gacgctgaag
     4981 cgctcgacgt cgaagaagtc cggcacctcg ccgagcacgc gcttgacgag caggtagaag
     5041 gacgcgtcgg cgctctcgaa ggcgtagcct tcggcttcct tgcgcttgac ctcgtcgagc
     5101 acgcggccga cgcgcgcgtc gtccttcggc aggtcgatgc cgacgcgctg catcgcggcc
     5161 aggatgttcg accgcccggc ctgatccgaa acaagcacct tgcgcatgtt gccgaccagc
     5221 tccggcgcga catgctcgta ggtgcgcggg tccttgagca cggccgaggc gtggatgccg
     5281 gccttggtgg cgaaggcgct ggcgccgacg aagggcgcat gccgatcggg cgcgcggttg
     5341 agcagctcgt cgagcatgtg ggcggcctgc gtcagcgtgc cgagggcctc gtcggatacg
     5401 ccggtctcga aacgctggtc gtagccgttc ttgagcttca acgtgccgat cagcgtcacg
     5461 aggttggcgt tgccgcagcg ctcgccgagc ccgttgagcg tgccctggat gtggcgcgcg
     5521 ccggcctcga ccgcggccag cgagttggcg accgcgcagc cgcaatcgtc atgcgcatgg
     5581 atgccaaggc gctcgcccgg cacgtgccgc gtcacctcgg cgacgatgcc cgccacttcg
     5641 tgcggcagcg tcccgccatt ggtgtcgcac agcacgatcc agcgcgcgcc ggcgtcgcac
     5701 gcggttttcg cgcaggcgag cgcgtaaccg ggatcggcct tgtagccgtc gaaaaaatgc
     5761 tcgcagtcga cgatgacctc gcggcccctg gcgagcgccg ccttgacgct ctcgcggatg
     5821 ccgtcgaggt tttcctcggg cgtcgtctcg agcgcgacgc gcacgtgata atcccacgcc
     5881 ttggcgacga agcagatggc gtccgccctg gcgtcgagca aagccgcgac gccgggatcg
     5941 ttggcggccg agcgccctgc ccgcttggtc atgccgaagg cggtgaactt ggcgcgctgc
     6001 gtgcgcttct cggcgaagaa atccgtgtcg agcggattgg cgcccggata gccgccttcc
     6061 acgtaatcga tgccaagccg gtcgagcagc gtcgcgatgg tgcgcttgtc ctcgagcgaa
     6121 aaatcgacgc cggtcgtctg cgcgccgtcg cgcagcgtcg tgtcgaacag gtagaggcgc
     6181 tcgcgtgcgc tcatgaccgc cccttcccgc cggcagtgcc gaaacgcttc tgcatggtcg
     6241 tattgccgag ccattcgtcg ccgagcgcga cggtgttgcg ccgctcggct gtaaaaccgc
     6301 gcttctcgaa gaagccgcgc gcggtgtcgc tgacgtcggc atcgaggcgc gtcgcgccgc
     6361 gcgcctgcgc aagcttttcg agcgcgtcga tcaggagcgc cgcgacgccc tgccctgccg
     6421 ccgacggatg aacgtagagc aggtcgatgt ggtccgtgcc ctgcagcgtc gcgaagccga
     6481 ccggcgcgcc cgcgacggtt gcgaccagcg tcagcccgcg cgcgagacgc ccggcgaact
     6541 ccgcctcgtc gtcggcctcg gccgcccagg cggcctgctg cgccgggctg taatcctcgc
     6601 ccgtcagctc ctcgatgctc gcctgataga tcgccgccag caccggcgca tccgccggca
     6661 ggaacggccg cagcgcgggg gtcatggcac gacctcttcc ctcccccctt cagcggggga
     6721 gggtcgactc gcgaagcgag cggggagagg gggtgtcaaa acgcgcacat gcgacgttcg
     6781 gagagattcg cggccatagc ccctctcccc gctcgtcccg gacaagtccg gggcgagtcg
     6841 accctccccc gctaaagggg ggagggttcg cgcgcgtgct tgcaaactca tggcgccacc
     6901 tcccaggtgg tggtgccgtc cttgttgtcg tgcagcacga tgcccatggc cttgagctcg
     6961 tcgcggatgc ggtccgactc ggcccagttc ctggtggcgc gcgcggtgcg tcggaccgag
     7021 atcagatcct cgaccttgct cgccacctcg ggcgcaatac tgatggcgcg ccgcagcggg
     7081 gtcgtgaaac cgagcgcgtg caggctggcg gcgagcgcct tgcgctcgcc cctgcgctcg
     7141 agggcgtgca gctcgacgat cgccttcggc gtgttgagat cgtcagtgag tgcgtcgagc
     7201 acctccggcg ccagctcggc gcccgtggct tccccgaatt ccgcaagcgc cgtccacgac
     7261 gcaagcgtct gctcggcttc ctccagcgcc cgcaccgtcc agtcgatcgg ctgccggtaa
     7321 tgcgtgcgca gcatggcgaa gcgcagcacg tcgccgggcc ag
//
LOCUS       DATAIQ010000255         1829 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_13618, whole genome shotgun sequence.
ACCESSION   DATAIQ010000255 DATAIQ010000000
VERSION     DATAIQ010000255.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1829)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1829)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1829
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_13618"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..494)
                     /locus_tag="VHN20_04415"
     CDS             complement(<1..494)
                     /locus_tag="VHN20_04415"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007568264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HEX2725046.1"
                     /translation="MARIDSDQLIEGLTFDDVLLRPGRSEVLPADVDIKTFLTRRIRL
                     NLPIIASAMDTVTEASMAIAMAQNGGLGVIHRNLEPGPQAEQVRLVKKYESGMVTNPI
                     TIFPDETLAQALDVMKRNGISGIPVVERGPNGGKGQLVGIITNRDVRFATNPNQPVAE
                     LMTK"
     gene            915..1793
                     /locus_tag="VHN20_04420"
     CDS             915..1793
                     /locus_tag="VHN20_04420"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020186115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEX2725047.1"
                     /translation="MDQKIINLFDEYTHGGMNRRSFLDRLATLAGGAAAANALLPLLE
                     NNYAMAQVVAESDPRIVTETFQVPGVQGLQGYLARPKAGGKHPAVLVIHENRGLNPHI
                     KDVTRRVATEGFVALGLDYLSPIGGTPADEDKARDMIGTLKAPDIVASGKAAVAALAS
                     HPNSTGKVGAVGFCWGGGAVNNLAVAEPGLDAGVAYYGRQPAADQVASIKAPLMLHYA
                     GLDEPINAGIPAYEAALKAAGKTYEVHVYQGVNHAFNNDTNAARYNKEAADLAWSRTV
                     AFFRKHLGTADAAQRS"
BASE COUNT          304 a          640 c          617 g          268 t
ORIGIN      
        1 tccttggtca tcagctcggc gaccggctgg ttcgggttgg tggcgaagcg cacgtcgcgg
       61 ttggtgatga tgccgaccag ctggcccttg ccgccgttcg gcccgcgctc gaccaccgga
      121 atgccggaga tgccgttgcg cttcatcacg tcgagcgcct gcgccagcgt ctcgtccggg
      181 aagatggtga tcgggttcgt caccatgccg gattcgtatt tcttgacgag gcgcacctgc
      241 tcggcctgcg ggccgggctc gaggttgcgg tggatcaccc cgaggccgcc attctgggcc
      301 atggcgatcg ccatcgacgc ctcggtcacc gtgtccatcg ccgaggcgat gatcggcagg
      361 ttgaggcgga tgcggcgcgt caggaaggtc ttgatgtcga cgtcggccgg caggacctcc
      421 gaccgcccgg gcctgaggag gacgtcgtcg aaggtcaacc cttcgatcag ctgatcggaa
      481 tcgatgcggg ccatggccaa ctcctgcggc atacgaggga tgccgcaagg gcgcgcggct
      541 ccaagttggc gcgggttcgt agcacgcgga accggccctg gcaaagcgct tcacgccccc
      601 ggcgcacagg ttgatggcgg acgatgggag gtgctgcaag tcatcgccga gcttgtccgg
      661 cggccatgac aaaccagcgc gccatgtcat gcccggcctt gtgccgggca tcccgcttcg
      721 tcgtgcgctg ccgatcggga tggccgtacc cggatcagcc cttcgggctg tccgggcact
      781 gaagggacac caagcccggc catgacaacg tgggggtgga gcaggagccc acagagttgt
      841 gaggcccccc cgccttgatc cctgcggcgg gcgcggcaat gctccgcgcc ggccaagaca
      901 cacggagggt cgccatggac cagaagatca tcaacctgtt cgacgaatac acgcatggcg
      961 gcatgaaccg tcgcagcttc ctcgaccgcc tcgcgacgct ggccggcggc gccgccgcgg
     1021 ccaacgcgct gctgcccctg ctcgagaaca actacgccat ggcccaggtc gtggccgaga
     1081 gcgacccgcg catcgtcacc gagacgttcc aggtgccggg cgtgcaggga ctgcagggct
     1141 atctcgccag gcccaaggcc ggcggcaagc acccggccgt gctcgtcatc cacgagaacc
     1201 gtggcctcaa cccgcacatc aaggacgtga cccgccgcgt cgccaccgaa ggcttcgtgg
     1261 ccctcggcct cgactactta agcccgatcg gcggcacgcc ggccgacgag gacaaggcgc
     1321 gcgatatgat cggcacgctc aaggcgccgg acatcgtcgc ctccggcaag gccgcggtgg
     1381 cggcgctggc gtcgcatccg aacagcaccg gcaaggtcgg cgcggtcggc ttctgctggg
     1441 gcggcggcgc cgtcaataac ctcgcggtcg ccgagccggg tctcgacgcc ggggtcgcct
     1501 actacggccg ccagcccgcg gccgatcagg tcgccagcat caaggcgccc ctcatgctgc
     1561 actacgcagg cctcgacgag cccatcaacg ccggcatccc ggcctacgag gcggccttga
     1621 aggcggccgg caagacctac gaggtgcacg tgtaccaggg cgtcaaccac gccttcaaca
     1681 acgacaccaa cgccgcccgc tacaacaagg aagcggccga tctggcctgg agccgcaccg
     1741 tcgcgttctt caggaagcac ctcggcacgg cggacgcggc gcagaggtcg tgaccgggag
     1801 cacccctacc acgcgcgccc gtcttggat
//
LOCUS       DATAIQ010000256         2186 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_13643, whole genome shotgun sequence.
ACCESSION   DATAIQ010000256 DATAIQ010000000
VERSION     DATAIQ010000256.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2186)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2186)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2186
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_13643"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            198..1511
                     /locus_tag="VHN20_04425"
     CDS             198..1511
                     /locus_tag="VHN20_04425"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HEX2725048.1"
                     /translation="MTRGGNESELHRLTASGAAALLGAKSVTAEGLARACLARMEGRD
                     PLVRAWAAVQPEHVVAAARELDRAPRRGPLHGIPIGVKDVIDVDGLPTQYNSPLYQGH
                     RPAADADCIALLRHAGALIFGKTATVEFAAGGRRAPTRNPHDLERTPGGSSSGSAAAV
                     ADFHVPIALGTQSAGSVIRPASYCGIYGMKPTWGTVGRDGIKPYAPSLDTPGWFARSV
                     ADLRLVAEALCVSLDPPAPAPPLAGARIAVCRTPAWPRAEPATVEAVRRGATALQAAG
                     AVIVDLTLPPIFDGLIAARRTIASGEGRASFLAEARLHGERLHADVRAMPENRSGITG
                     RQMREAYDHAASGRAAFDDIAAQFTAILAPSAPGEASHGLESTGDTDFNEMWTLLHVP
                     CVNLRGLSGPNGLPVGLTLVGRRFSDLQLLAAAEEIAPHFEASSP"
     gene            1720..2186
                     /locus_tag="VHN20_04430"
                     /pseudo
     CDS             1720..2186
                     /locus_tag="VHN20_04430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011607949.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT          326 a          728 c          766 g          366 t
ORIGIN      
        1 gtcgcgaata cgcccggaaa tggcgggctg cgacgtcttc agatggcgcg ccgcggcatg
       61 gaagctcccg aggcgtccga tccaatacag cgcttcgaac tggtgcaggt tcatcggcgg
      121 gctccgaggc gcctcacgat agggcgcgcc gccgagcctg tcgaatggga cgctcccgtg
      181 ccggatggag gcggacgatg acccgcggcg ggaacgaatc cgagctgcat cgcctgaccg
      241 cctcgggagc ggcggccctg cttggggcga aatcggtcac ggcggagggt cttgcgaggg
      301 cttgcctcgc gcggatggag ggacgcgacc cgctcgtgcg ggcgtgggcg gcggtgcagc
      361 ccgagcacgt cgtggcggcg gcgcgcgagc tcgacagggc acctcggcgg ggtccgctcc
      421 atggcatccc gattggcgtc aaggacgtga tcgacgtcga cggcctgccg acacagtaca
      481 attcacccct ttatcagggc catcgtcccg ccgccgatgc cgactgcatc gccctgctgc
      541 gacacgcagg ggcgctgatc ttcggcaaga cggcgaccgt cgagttcgcc gcaggggggc
      601 gccgcgcgcc gacgcgcaac ccgcacgacc tggagcgcac gcccggcggc tcctcgagcg
      661 gctccgccgc cgccgtggcc gatttccatg ttccgatcgc gcttggcacc cagtccgccg
      721 gctcggtgat tcgccccgct tcgtattgcg gcatttacgg gatgaagccg acgtggggaa
      781 cggtcggccg cgacggaatc aaaccttacg ctccgagcct ggacacgccc ggctggttcg
      841 cccgctcggt tgccgatctc aggctcgtgg ccgaggccct gtgcgtgtcg ctcgacccac
      901 cggctccagc cccgccgctg gcgggcgcca ggattgccgt gtgccgcacg cccgcttggc
      961 cccgggccga gcccgcgacc gtcgaggccg ttcgacgggg cgcgacggcg ctgcaagcgg
     1021 cgggcgccgt catcgtcgat cttactctgc cgccgatctt cgatgggctg atcgcggcac
     1081 gccgcacgat cgcgagcggc gagggccggg cgtccttcct ggccgaggcg cggctccacg
     1141 gcgagaggct gcatgcggac gtgcgcgcca tgccggaaaa ccggagcggg atcacggggc
     1201 ggcagatgcg cgaggcctac gaccacgccg cttcgggccg cgcggcattc gacgacattg
     1261 ccgcgcagtt caccgccatt ttggcgccga gcgccccggg cgaggcatcg catggcctcg
     1321 agtcgacagg cgacacggac ttcaacgaga tgtggacgct tctgcacgtg ccgtgcgtta
     1381 atctgcgggg actttcaggt ccgaacggcc tcccggtcgg actgacgctc gtcgggcggc
     1441 ggttcagtga tctccagctt ctcgcagccg cggaagagat cgccccgcat ttcgaggcga
     1501 gcagccctta gcgaggcgcg cctgaccggc gatcatacta ccttgcggtg gcgctttggg
     1561 gcagaactcc taagagcgtg tccgacctca gcgtccgctt tgctacttta ttgaccgaaa
     1621 cctgtccgtc cgcttacggc cgatgctgtt gaaaaactcg gccttgaaga tgtggcgaga
     1681 tcctgattca gcattcccct gagtggggga gacgagcgga tgatgggcga gcggaaggcg
     1741 gtgcagcagg cgttgttcta cggcttcagc cttggacggc acgtgccagc ggatcacctg
     1801 ctgcgtgcga tcgatcggtt cgtagaccta tcggctctgc gcgagcagct gcggcccttc
     1861 tacagcgaga cggccggccc tcgatcgatc ccgaactgat catccgcatg ctgctggtgg
     1921 gctattgctt cggcatccgt tcggagcggc ggctctgcgc ggaggtgcat ctgaacctcg
     1981 cctacaggtg gttctgcggg ctcggccttg agggtgcggt gcccgatcac tccaccttct
     2041 cgaagaaccg gcacggtcgc ttgcgcgaca gcgacctgct gcgccggctg ttcgagaaaa
     2101 cggtgaagcg ctgcatcgac gagggcttgg tcggcggaga cggctttgcc gtggactcca
     2161 gcctgatccg tgccgaggcg aaccgg
//
LOCUS       DATAIQ010000257         1665 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_144964, whole genome shotgun sequence.
ACCESSION   DATAIQ010000257 DATAIQ010000000
VERSION     DATAIQ010000257.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1665)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1665)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1665
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_144964"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..534
                     /locus_tag="VHN20_04435"
     CDS             <1..534
                     /locus_tag="VHN20_04435"
                     /inference="COORDINATES: protein motif:HMM:NF019935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional [glutamine synthetase]
                     adenylyltransferase/[glutamine
                     synthetase]-adenylyl-L-tyrosine phosphorylase"
                     /protein_id="HEX2725049.1"
                     /translation="RVIAAGDGFGGEVERAIAAIVGTRRDPALVAAEVRAMRTMIAKE
                     KGDADPWDLKLAAGGLTDLDFIAQAITLAEAARHPSLIGLATPAVFAEAANAGLLDEA
                     DTRQLGAAHALFNDIFQWQRLTIEGPFDAATVSPAILQRLAAAVGRPNAAVLLEDLNE
                     TRHGVRVIFARVLQPVR"
     gene            complement(664..>1665)
                     /locus_tag="VHN20_04440"
     CDS             complement(664..>1665)
                     /locus_tag="VHN20_04440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX2725050.1"
                     /translation="AGARTFEAQLADGRWLQINERRTKDGGYVSVGTDITALKRHEER
                     LLDSERRLIATVSDLKKSRQTLETQAQQLADLAERYLDQKAQAESANRAKSEFLANMS
                     HELRTPLNAIIGFAEVMERGMFGPIGCDKYSEYCQDIRSSGEYLLSVINDILDMSRIE
                     AGRINLAHRPVVLDEIVGRAIKLVSEHARSKQITLVMDELPKITVPADERALQQILVN
                     LFQNAVKFTGEGGRVAVRARCAGDAVNIYVEDTGIGIPRDALGKLGRPFEQVETEFNK
                     TYKGSGLGLAIAKSLSELHGGGLRIRSQEGVGTIVMVHLPLKQPSVAEMIAAPDTIH"
BASE COUNT          241 a          559 c          569 g          296 t
ORIGIN      
        1 cgcgtgatcg cggccggcga cggcttcggc ggcgaggtgg agcgggcgat cgcggcgatc
       61 gtgggcacgc ggcgggatcc cgccctcgtc gcggccgaag tccgcgccat gcggacgatg
      121 atcgccaagg agaagggcga cgccgatccg tgggacctca agctcgcggc gggcggcctc
      181 accgacctcg acttcatcgc ccaggcgatc acgctggcgg aggcggcgcg gcacccgagc
      241 ctgatcggcc tcgccacgcc cgcggtgttc gccgaggcgg ccaacgccgg ccttctcgac
      301 gaagccgaca cgcggcagct cggcgcggcg catgccctgt tcaacgacat ctttcagtgg
      361 cagcgcctca ccatcgaggg cccattcgac gccgcgaccg tgtcgccggc gatcctgcag
      421 cggctcgccg ccgccgtcgg ccgccccaat gccgccgtgc tcctcgaaga cctcaacgag
      481 acccgccatg gcgtgcgcgt aatttttgcg cgcgtccttc agccggtccg ctagccaggg
      541 tagcttccct tccttgtcat tggcgggctt gactggaagc ctgtccctcc gctgcgtcac
      601 gcgggggagg gcagtggaag accgaacatg acgatatgaa aaggtgcgtg acgccgaccg
      661 ccgtcagtgg atcgtgtcgg gtgccgcgat catctcggcg acggacggct gcttgagggg
      721 caggtgcacc atgacgatcg tgccgacgcc ttcctgcgag cggatccgga ggccgccgcc
      781 gtgcagctcc gacaaagact tggcgatcgc gaggccgagg cctgagccct tgtaggtctt
      841 gttgaactcc gtctcgacct gctcgaacgg ccgtccgagc ttgccaagcg cgtccctggg
      901 aatgccgatg ccggtgtctt cgacatagat gttgacggcg tcgccggcgc agcgggcgcg
      961 caccgcgacc cggccgcctt cgcccgtgaa tttcacggca ttctggaaca ggttgaccag
     1021 gatctgctgc aaggcgcgct cgtccgccgg gacggtgatc ttcggcagct cgtccatcac
     1081 cagcgtgatc tgcttcgagc gcgcatgctc cgatacaagc ttgatggccc gtccgacgat
     1141 ctcgtcgagc accacgggcc ggtgggcgag attgatgcgc ccggcctcga tgcgcgacat
     1201 gtcgaggatg tcgttgatca cggacaggag gtattcgccg ctcgagcgga tgtcctggca
     1261 gtactcgctg tacttgtcgc agccgatcgg cccgaacatg ccgcgctcca tcacctcggc
     1321 gaagccgatg atcgcgttga gcggggtcct gagctcgtgg ctcatgttgg cgaggaattc
     1381 cgatttcgcc cggttggcgc tctctgcctg cgccttctgg tcgagataac gctcggcgag
     1441 atcggcgagc tgctgcgcct gggtctccag ggtctgccgg gattttttca ggtcgctgac
     1501 cgtggcgatg agccggcgct cggaatcgag cagccgttcc tcgtggcgct tcagggcggt
     1561 gatgtccgtg ccgaccgaga cgtagccgcc gtccttggtg cggcgctcgt tgatctgcag
     1621 ccagcgtccg tccgcgagct gcgcctcgaa cgtgcgcgcg ccggc
//
LOCUS       DATAIQ010000258         1909 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_105816, whole genome shotgun sequence.
ACCESSION   DATAIQ010000258 DATAIQ010000000
VERSION     DATAIQ010000258.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1909)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1909)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1909
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105816"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..659)
                     /locus_tag="VHN20_04445"
     CDS             complement(<1..659)
                     /locus_tag="VHN20_04445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CNNM domain-containing protein"
                     /protein_id="HEX2725051.1"
                     /translation="MAEDGSVNLWIAAAVVVFCLLLSAFFSAGETAFTGASRARMLSL
                     EKNGDRRARMVNRLLLMRERFIGAVLIGNNVVNIGVSAFMTSVLVGLFGNEGVLYATI
                     AMSILVIVFAEVLPKTLAITAPDRVSLAIARPIASVVAVLGPLALAVEWLVRWILRPF
                     GIRIGANQPILSATEEIRGQVDLLHEEGGVVKDERDMLGGLLDLKDLTVAEVMVHRTN
                     MR"
     gene            complement(673..1812)
                     /gene="aroB"
                     /locus_tag="VHN20_04450"
     CDS             complement(673..1812)
                     /gene="aroB"
                     /locus_tag="VHN20_04450"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003856 - 3-dehydroquinate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HEX2725052.1"
                     /translation="MTVAVDSAVRTGVTRVHVPLGGRAYDILIGRDLLGVAGAHIAGL
                     RARAAAIVSDDTVAPLYAHRLASALADHRVRSATVVVPAGEASKSYDGLGRVSEAILA
                     ARIERGDLVVALGGGVVGDLAGFAAAVVRRGVRFVQIPTTLLAQVDSSVGGKTGINSP
                     HGKNLVGAFHQPSLVLADTALLDTLPPRQLRAGYAEVAKYGLINDEAFFRWCETNWRG
                     IFAGGPERDGAVAHSCQAKADIVVRDEREDGERALLNFGHTFAHALERLTDYDSARLV
                     HGEAVAIGLALAFRFSRQLGLCPAGDAERVAAHLADAGLPTRLQDVPGGCGSPEALLD
                     AMAQDKKVKAGALTFILARGIGHSFIAPGIAADCVRTFLAHELDA"
BASE COUNT          320 a          628 c          692 g          269 t
ORIGIN      
        1 cgcatgttcg tgcgatgcac catcacctcg gcgacggtga gatccttgag atcgagaagg
       61 ccgccgagca tgtcgcgctc gtctttcacg acgccgccct cctcgtgcag gaggtcgacc
      121 tggccgcgga tctcctcggt cgccgacagg atcggctgat tggcgccgat gcggatgccg
      181 aaggggcgca ggatccagcg cacgagccac tcgaccgcga gcgccagcgg gcccaggacc
      241 gccacgaccg acgcgatcgg gcgggcgatg gcgagcgaga cccggtcggg cgccgtgatg
      301 gcgagggtct tgggcagcac ttccgcgaac acgatcacca ggatcgacat ggcgatcgtg
      361 gcgtagagta cgccttcgtt gccgaacaac cccaccagga cgctggtcat gaaggcggag
      421 acgccgatat tgacgacgtt gttgccgatc agcacggcgc cgatgaagcg ctcgcgcatc
      481 agcagcaggc ggttcaccat gcgggcacgg cggtcgccgt tcttctcgag agacagcatg
      541 cgggcgcgcg aggcgcccgt gaaggccgtc tcacccgccg agaagaaggc cgacagcagc
      601 aggcagaaaa ccacgactgc tgccgcgatc cagagattca ccgatccgtc ttcagccatg
      661 gccgtgttcg cgttaggcgt cgagctcgtg cgcgaggaac gtgcgcacgc agtcggccgc
      721 aatgccgggc gcgatgaagc tgtggccaat gccgcgtgcc aggatgaagg tgagcgcacc
      781 ggccttgacc ttcttgtcct gggccatcgc gtcgaggaga gcctcgggcg agccgcatcc
      841 ccccggcacg tcctgcaggc gcgtcgggag gccggcgtcg gcgaggtggg cggcgacgcg
      901 ctcggcgtcg ccggcggggc atagcccgag ctgccgcgag aacctgaagg cgagggcgag
      961 gccgattgcg accgcctccc catggacgag gcgtgcgctg tcgtaatccg tgagacgctc
     1021 gagcgcgtgc gcgaaggtgt gcccgaaatt gagaagcgca cgctcgccgt cctcgcgctc
     1081 gtcgcgcacg acgatgtcgg ccttggcttg gcaactatgc gcgacggcgc cgtcgcgctc
     1141 ggggccgccc gcgaagatgc cgcgccagtt cgtctcgcac cagcggaaga acgcttcgtc
     1201 gttgatgagg ccgtatttgg cgacttcggc gtagccggcg cgcagctggc gcggcggcag
     1261 cgtgtcgagg agcgcggtgt cggcgagaac gaggctcggc tggtggaagg caccgacgag
     1321 attcttgccg tggggcgaat tgatcccggt cttgccgccc accgaggaat cgacctgcgc
     1381 cagaagggtc gtcgggatct gcacgaaacg aacgccgcgc ctgacgaccg ccgccgcgaa
     1441 tccggcgaga tcgccgacga cgccgccgcc gagcgccacg accagatcgc cgcgttcgat
     1501 gcgcgcggca aggatcgcct cggacacccg tcccaggccg tcgtagcttt tcgaggcctc
     1561 gccggcgggg acgacgacgg tggcgctgcg gacgcgatga tcggcgagcg ctgaagccag
     1621 ccggtgcgcg tagagcggcg ctaccgtgtc gtcggacacg atggcggcgg cccgcgcccg
     1681 caatccggcg atatgggctc cggctacgcc gagaagatcg cggccgatca ggatgtcgta
     1741 ggcgcgaccg ccgaggggaa cgtggaccct ggtgacgccg gtgcgcaccg cggagtcgac
     1801 agcgacggtc acgagcgcgc gctccttgtc gacagccacg cggcaagggc gttcaggagg
     1861 tcctccacca cccggtcatg cggggtatcg cgcgattcga cggtcacgt
//
LOCUS       DATAIQ010000259         2695 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_144997, whole genome shotgun sequence.
ACCESSION   DATAIQ010000259 DATAIQ010000000
VERSION     DATAIQ010000259.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2695)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2695)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2695
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_144997"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..478)
                     /locus_tag="VHN20_04455"
     CDS             complement(<1..478)
                     /locus_tag="VHN20_04455"
                     /inference="COORDINATES: protein motif:HMM:NF012296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HEX2725053.1"
                     /translation="MHASIPVEHGTRLVPPFPPAAPADLSGFALARVMRVNGLRVWPE
                     RAYQDDVLERRFFGRSTFLINSADAIRRVLIDNHDNYGRTRATIRVLKPLLGDGLFIS
                     EGQAWKQQRRTLAPAFTPKASDAFAGHMVAAAEHRIAELSGSTGDPVDLYAIIQRLT"
     gene            complement(587..859)
                     /locus_tag="VHN20_04460"
     CDS             complement(587..859)
                     /locus_tag="VHN20_04460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725054.1"
                     /translation="MKSFEARFGIPAGHRLVLIRSRIRGGSARGEFWEHEEFDALGAL
                     VGRYESFTEVDPVTGVASSGWYRYDGDGFLIDRHDRIPERLGDLLA"
     gene            1195..2001
                     /locus_tag="VHN20_04465"
     CDS             1195..2001
                     /locus_tag="VHN20_04465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725055.1"
                     /translation="MAVDYRAELRRPVALGLLAAAVLGWLLLVIVAVVQARKASNYRR
                     EIEDQRTTLATTRAELEQQRQTSGTLKDLQTRITAAQQQVTQTEQARTQAQAQATAAQ
                     QAAEQHKRTTAEAERAAQEQSQRLAAVQAEVQQSEGRLGTLKGEVTTVEQSIAARTQE
                     LAEVGRRLEDARQQEAKSREGLAKLSQEIAVKAAEVAQAEQRIQQARDLEARLQALRQ
                     EMTDTEAKLGEARKQLVIPPASAQEGSAQPSAQTGTAQPPAQTGSGQPPQ"
     gene            2411..>2695
                     /locus_tag="VHN20_04470"
     CDS             2411..>2695
                     /locus_tag="VHN20_04470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008966379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX2725056.1"
                     /translation="MTAIPTIAPPHPAPRVPAFRLPPRTCDTHCHIFGPDRLYPYVPE
                     RPYTPPDAPLDMFAALHDHLGIERAVIVNATPHGRANRVVTDAIAQSGGRY"
BASE COUNT          479 a          901 c          924 g          391 t
ORIGIN      
        1 gggtgagccg ctggatgatg gcgtaaaggt cgacgggatc gccggtgctg ccgctcagct
       61 cggcgatgcg atgctcggcg gcggcgacca tgtggccggc gaacgcgtcg ctcgccttcg
      121 gcgtgaaggc cggcgccagc gtacgccgct gctgcttcca ggcctggccc tcgctgatga
      181 agaggccgtc gccgaggagg ggtttcagga cacggatggt cgcgcgcgtg cgcccgtaat
      241 tgtcatgatt gtcgatgagc acgcgacgga tggcgtcggc gctgttgatc agaaaggtgg
      301 agcggccgaa gaatcggcgt tccagcacgt catcctggta ggcgcgctcg ggccagacgc
      361 gcaggccgtt gacgcgcatg acccgcgcca gcgcgaagcc cgacaggtcg gccggggccg
      421 cgggcgggaa aggcgggaca aggcgcgtgc cgtgctcgac cggaatgctc gcgtgcatgg
      481 cgaccttcgt agcaggcttt gccggtgctt gcgattggcc acggtcggca aacgcctacc
      541 tggtgtctcg gtgccgcgcg gcgagcgggc gacgtcgatg caggcctcag gcgagaagat
      601 cgccgaggcg ctccgggatg cggtcgtgac ggtcgatcag gaagccgtca ccgtcgtacc
      661 gataccagcc gctcgacgcg acgccagtga caggatcgac ctcggtgaag ctctcgtagc
      721 gtccgaccag ggcgccgagg gcatcgaact cctcgtgctc ccagaactcg ccgcgcgcgc
      781 tgccgccgcg aatgcgcgac cggatcagca caagccggtg ccccgcggga attccgaacc
      841 tcgcctcgaa gcttttcatg actctgtcac atgctgcaca tgctctgttt aaatgctgca
      901 gtgcacaccg caaggcctcc gtgcggttgt cccgccgaag ttttggccgc cgtcgccaat
      961 cggatcgacg actgccgtca ccctcgggtc ggaaggggcg cgatgccgcc cccgtcgaac
     1021 gggcggcgtc gaaaagatgg cgcacagcgc ggcgggccgg ggcatttcct ccaggttgca
     1081 gggcgcgaag gacgggagac ttccgcgcga gcaaaactga agaagaagcc cgatgacgca
     1141 gccccgggag tgccttaggg tacctcccgc ggcgcttccc tggagccaaa aaagatggcg
     1201 gttgattatc gtgcggaact cagacgtccg gttgccctcg ggctgctcgc ggcggcggtc
     1261 ttaggctggc tgctgctcgt tatcgtggct gtcgtccagg cgagaaaggc gagcaactac
     1321 cgccgggaga tcgaggacca gaggacgacc cttgccacaa cccgcgccga gctcgagcag
     1381 cagcggcaga cgagcggcac gctgaaggac ttgcagacga ggatcacggc cgcccagcag
     1441 caggtcacgc agaccgagca ggcgcgcacc caggcgcagg cccaggccac ggccgcgcaa
     1501 caggcggccg agcagcacaa gcgcaccacc gccgaagcgg aacgggccgc ccaggagcag
     1561 agccagcgcc tcgccgccgt gcaggcggag gtgcagcagt cggagggacg tctcggcacg
     1621 ttgaagggtg aggtgacgac cgtcgagcag agcatcgccg cccgcaccca ggaactggcc
     1681 gaggtcggcc gccggctgga agacgcacgg cagcaggagg cgaagagccg tgagggcctg
     1741 gcgaagctca gccaggagat cgcggtaaag gcggcggagg tcgcgcaagc cgagcagcgc
     1801 atccagcagg cccgcgatct ggaggctcgc ctgcaggcgt tgcggcagga gatgacggac
     1861 acggaagcga agctcggcga ggcgcgcaag cagctcgtga tcccgccggc gtccgctcag
     1921 gaggggagcg cgcagccgtc ggcgcagacc ggaaccgcgc agccgccggc gcaaaccgga
     1981 agcgggcagc cgccgcagta gcgccgtccg atctgcacgc tctcgtccgg aaagggcaga
     2041 aaccgggacg gatcggttgg tccgcgccgg tccgcctctg gacttcgccg ctcgactcgc
     2101 gctccaacca ccatccggac ccggtcccga ccgcctgggt cgtgtcccgg tttgatccct
     2161 atcctttaga gcgggatcaa ttcagcaatt cggattgaat cgatcccgct cttccagatc
     2221 gtggtggtgg tcttcgttgt catatacacg ccaatcttca tctacctgtt cggctcccgc
     2281 tggcctcacg atccgatcta cgtggtaggc ggggtgtgcc tcgctgcctt gatgcgcagg
     2341 cgtcatccct gacccttcgc accgcggcaa aatgaagagc ggaaaattcg aacccagacg
     2401 tgaccgacgc atgaccgcca ttcccaccat tgcgccgccg catccagccc cgcgcgtccc
     2461 cgcgttccgc ctgccaccca ggacatgcga cacgcattgc cacatcttcg ggccggaccg
     2521 cctctatcct tatgtccccg agcggccgta cacgccgccg gacgcgccgc tcgacatgtt
     2581 cgccgccctc cacgaccacc tcggcatcga aagggcggtg atcgttaacg cgacgccgca
     2641 tggccgtgcc aatcgcgtcg tgacggacgc cattgcccag agcggcgggc gctac
//
LOCUS       DATAIQ010000260         1821 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_382713, whole genome shotgun sequence.
ACCESSION   DATAIQ010000260 DATAIQ010000000
VERSION     DATAIQ010000260.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1821)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1821)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1821
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_382713"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(160..1404)
                     /locus_tag="VHN20_04475"
     CDS             complement(160..1404)
                     /locus_tag="VHN20_04475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018429443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative DNA modification/repair radical SAM
                     protein"
                     /protein_id="HEX2725057.1"
                     /translation="MAQLDTRSKLAILADAAKYDASCASSGTAKRDSRGGKGVGSTEG
                     MGICHAYAPDGRCISLLKILLTNSCIFDCHYCINRKSSNVRRARFTVEEVVHLTLAFY
                     KRNYIEGLFLSSGIIRSPNYTMEQLVEVARQLREVHDFRGYIHLKTIPDADPELVRQA
                     GLHADRVSINVELPTEQGLARLAPEKSAPRIEGAMLGMKSAIEDGRDARKKYRSAPKF
                     APAGQSTQMIVGADAANDGDIVMRASRLYDRFRLRRVYYSAFSPIPDASAVLPLKRPP
                     LMREHRLYQSDWLMRFYGFKPKEVVAAADESGMLPLDVDPKLAWALRFREYFPVDVNR
                     ATREQLLRVPGLGTKAVGRLIKSRRWRKITLDDVARLTVSVAKVRPFIVTADWRPTLL
                     TDRLDLKALVVPRERQLDLFAA"
     gene            complement(1466..>1821)
                     /locus_tag="VHN20_04480"
     CDS             complement(1466..>1821)
                     /locus_tag="VHN20_04480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725058.1"
                     /translation="PPQSKPLESYLERHRDVAEHLPRGFLARPGDTPRPDEIERRIAG
                     VRAPPGWTVRRTFYFPAWTCAAPEPRTRLIMHRPDCAPRLERLRVETIGALTSLIALL
                     VVILLGWRRSRRTNR"
BASE COUNT          302 a          580 c          630 g          309 t
ORIGIN      
        1 tcgccgccct cgacctgcca cacgaccgcc gatgccggca ctccggcctc tgcgaggctg
       61 cgcgccgctt cgcgccagcc gtcgaagtcg tcgggcgcgg tgagggtcac ccgatggacg
      121 tcgatcatcg gaccgtcgcg aagcatgtcg gtcaaacgct caggccgcga acaggtccaa
      181 ttggcgttcg cgaggcacga ccagtgcctt gaggtcgagg cggtcggtga gcagcgtcgg
      241 gcgccagtcg gcggtgacga tgaacggccg caccttggcg acgctgaccg tgagccgcgc
      301 gacgtcgtcg agcgtaatct tgcgccagcg gcggctcttg atcagccggc ccacagcctt
      361 ggtgccgaga ccggggactc gaagcagctg ctcgcgcgtc gcgcggttga cgtcgaccgg
      421 gaaatattcg cggaacctga gcgcccaggc gagcttggga tccacgtcga gcggaagcat
      481 tccggactcg tccgctgccg caaccacctc cttcggcttg aagccgtaga agcgcatcag
      541 ccagtcggac tggtagagcc ggtgctcgcg catcagcggt gggcgtttca aaggcagcac
      601 cgcgctggcg tcggggatcg gcgaaaaggc gctgtaataa acccgtcgga ggcgaaagcg
      661 gtcataaagc ctgctcgcgc gcatcacgat gtcgccgtca ttggcggcgt cggcgccgac
      721 aatcatctgg gtcgactggc cggccggggc gaacttgggc gcgctgcgat atttcttgcg
      781 cgcgtccctg ccgtcctcga tcgcgctttt catcccaagc atcgcgccct cgatccgcgg
      841 cgcgcttttc tcaggcgcca gccgcgccag tccctgctcg gtcggcaact ctacattgat
      901 cgacacgcga tcggcatgga gcccggcctg gcgaaccagc tcgggatcgg catcggggat
      961 ggtcttgagg tggatgtagc cgcgaaagtc gtggacttcg cgcagctgcc gggcgacttc
     1021 gaccagctgc tccatcgtgt agtttggcga acggatgatg cccgacgaca ggaacaaccc
     1081 ctcgatatag ttgcgcttgt agaaggccag cgtgaggtgg acgacctcct cgaccgtgaa
     1141 gcgcgctcgg cgcacgttcg agctcttgcg gttgatgcaa taatggcagt cgaagatgca
     1201 gctgttggtc agcaggatct tgagcagact gatgcagcgc ccgtccggcg cataagcgtg
     1261 gcagatgccc atgccctcgg tcgagccgac gcccttcccg ccgcggctgt cccgcttcgc
     1321 tgtccccgac gacgcgcagg acgcgtcata tttggccgcg tcggcgagga tcgcgagctt
     1381 gctgcgggta tcgagctggg ccatatgttc actttacgtt ccccatctcc tgagtccagc
     1441 gcaaagtggg gaagtaggcc ggaattcaac ggtttgtgcg acgcgagcgg cgccagccga
     1501 gcaagatgac cacaagcaat gcaatcaggc tggtgagcgc gccgatcgtt tcgacccgca
     1561 ggcgctcgag acgcggcgcg cagtccgggc ggtgcatgat cagcctggtc cgcggctccg
     1621 gggcggcgca ggtccaggcg gggaagtaga aggttcgccg gacggtccat ccggggggtg
     1681 cgcgaacgcc ggcgatccgc cgctcgatct cgtccggccg gggtgtatcg ccgggccgcg
     1741 cgaggaagcc gcgcgggaga tgctcggcga cgtcgcggtg gcgctcgaga tacgattcga
     1801 gcggcttcga ctgcggcggc a
//
LOCUS       DATAIQ010000261         5741 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_13803, whole genome shotgun sequence.
ACCESSION   DATAIQ010000261 DATAIQ010000000
VERSION     DATAIQ010000261.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 5741)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5741)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5741
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_13803"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..574)
                     /locus_tag="VHN20_04485"
     CDS             complement(<1..574)
                     /locus_tag="VHN20_04485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725059.1"
                     /translation="MGAALAAGAVLYVADWRPDLATDGKPLQSQPAPAGARQAASAAT
                     SSSRADTRDPAATGSVEPARRRSSDAKPVEAKPVEAKPIEAKPIEANPIEAKSIEVKP
                     VESKPTETRPPEGKPIDTKSAETRLAEARPAPVDQRTRREPAVAEARQPRTVGPPAVL
                     LAPSRDPSGEKGERLGPAARDAAASESAAPK"
     gene            888..2399
                     /locus_tag="VHN20_04490"
     CDS             888..2399
                     /locus_tag="VHN20_04490"
                     /inference="COORDINATES: protein motif:HMM:NF014073.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HEX2725060.1"
                     /translation="MIDIMFSALWALLTTPKTMGLMLIGVFLGLIVGATPGIGGRLSI
                     ALAIPFIFGMEMIPGAVFLLTMHAVNGTSGQISSIMFGVPGDGDDAATTIDGYPMAKK
                     GEAGRALGASITASGVGGIIGAVVFAVMIPILEPVVLAFSPAEFFLLAVFGITLIAFL
                     AGKGNIFKGIIVGLYGMMLATIGMDPQTGTARFAGDYLFMWDGISLVTAVLALFAVPE
                     MIALGVKGGSIASVSMEAARFSYRQLFQGVLEVPRHWWLTLRTSIIGAIIGMIPGLGG
                     SAAAWMCYGHAVQTSKHPERFGHGAVEGVIAPETASNAKEGGSLLPTLFFGIPGSSGM
                     AVMMGAFLILGIQPGPAMITQHLDLVWTLIWALVVGNIIAVSFLLFITRWVAVLTFVN
                     GAYLVPFIIVLVALGAFVSEGRWENLVILLVLSTIGYLLLRADWPRAPFVIGLVLGKI
                     AEESLHKALQLWGMEFFVRPLSLVLIAMITITIAFAVYQNLRPAKIRQPIGAA"
     gene            2396..2971
                     /locus_tag="VHN20_04495"
     CDS             2396..2971
                     /locus_tag="VHN20_04495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725061.1"
                     /translation="MNWLSRSAMTFIMLAIFVTMVWIASGYPANARFMPFVVGIPAIG
                     LCLLQLVLDARSRRPVAAADTRGTFEKAEQTVSEMVGRQVNFEVAREPMPVVEIEPEL
                     SPRETVRRELTLWGWFVGFIAGILLFGFWVTIPIFLIFFLRLQARSSWGLALGLGLGV
                     TVLLFLAFSIAFRIEVHPGFITGYVQDYFQG"
     gene            3072..4322
                     /locus_tag="VHN20_04500"
     CDS             3072..4322
                     /locus_tag="VHN20_04500"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEX2725062.1"
                     /translation="MFSTRSWMSLLAVAGACATLIASPAMAQQGADFYKGKTVTYIVA
                     TAPGGGYDAYGRLVAEYMQKYLPGSTFVVRNMPGAGHLIGANAIYASRPDGLTIGTFN
                     TGLIYNQLLGLEGVRFDLAKMSWVGKAAADPRVLIVAQQSPIKTFEDLRSQKNQVNFA
                     TAGIGSASYVETVMLTNALKLPVKVLTGYNGNEDQLAMRRGEVVGSIASRSTYEQFVK
                     NGFGHFVAQIGGNDTDVPQLASQVTDPTGKKLIALVQSQGDIARLTAGPPGIPADRLE
                     ALRAAYKKAMEDKDLQAKAEKLERPVEPAYGEDVAKAVREALSQTPETVAVLKAAMEK
                     KDAPAAAAAPAMKGTIAELKDGNRKLVLKLADGKTFEAEISGSRTEITVAGQKSDRNG
                     IKAGMTCSVDAPSSGAEAKAIACN"
     gene            complement(4433..5713)
                     /locus_tag="VHN20_04505"
     CDS             complement(4433..5713)
                     /locus_tag="VHN20_04505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015930338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX2725063.1"
                     /translation="MGLATSAGWAAFQSADFRFFCAARFLIGLARQAQNVAVGLFVYD
                     VTQSAWALGLTGLFTFAPSMALVLFTGHVADAYDRRVVAMVTDAVSGLAAAGLFVCAW
                     FDISSMWPVYGLVAVAGAARAFGNPASQAMVANLVPRERFANAVAWDQTISQTATISG
                     PAVGGLLYAVDAGLAFAAAGLAAFAATLFTAAIRAHTVKPAREKVSLRTLAAGLTFIR
                     SKPVILGAITLDFIAVMFGGVTALLPIFAQEVLNVGPWGVGVLRSMQAVGALCMATLL
                     AHWPLTDRRAGMRLLQGVAVYGLATVVFGLSTNFFLSAACMFVIGAADMVSLVVRMTL
                     VQIDTPDSMRGRVAAVNSFLTGGSNSLGEFESGAVAALIGAVPTVIIGGIASIGLAVL
                     WARLFPNLRDRDRLIPEPREEAHEAGKREAAPAS"
BASE COUNT          918 a         1950 c         1905 g          968 t
ORIGIN      
        1 ccttgggcgc agcgctctcg gacgcggccg cgtcacgggc ggcgggcccc agcctctcac
       61 ccttttcgcc ggatgggtcg cgggacggag caagcagcac ggcgggaggg ccgacggtgc
      121 gcggctgccg cgcctcggcg accgcgggct cgcgccgggt gcgttgatcg accggggccg
      181 gtctggcttc agccagcctg gtttcggccg acttcgtgtc gattggcttg ccttctggag
      241 gcctggtttc ggtcggcttc gactcgaccg gcttcacctc gattgatttt gcctcgatcg
      301 ggttggcttc gatcggcttg gcttcgatcg gctttgcctc gaccggcttg gcctcgactg
      361 gcttggcgtc ggagctgcgc ctgcgggccg gctcgacgct tccggtggcg gccgggtcgc
      421 gcgtgtctgc ccgcgaggac gacgtggcgg cactggcggc ctgtcgcgcg ccggccgggg
      481 ccggctgact ctgcaggggt ttgccgtcgg tggccaggtc cggccgccaa tccgcaacgt
      541 agaggaccgc gcctgccgcc agggcggcac ccacggtcca catgatcatg aaagctctca
      601 gcatgacacg cccgccacat gacaccgtcc cgggcgagcg gcaggtgacg ggtccctggt
      661 tgaagcgaag ctccgctcgg acctcaacgc gagacgcgga gccacggttc cgggaagctg
      721 ccgccacaat ccccgcgaca aagccgcccg cccggacagc cgccggatgc agaaacccgg
      781 ctttcgcctg tgggacgggc ctctcttagg cctattgcgg agggctgcca gtatgttagg
      841 gcatcgcgcc gctcgcgcgc gcgggcgggg gtgggaacgc gactcatatg atcgatatca
      901 tgttcagcgc gctctgggcg ctgctgacca cgcccaagac gatgggcctc atgctcatcg
      961 gggtgtttct cgggcttatc gtcggcgcga cgccgggcat cggcggacgg ctttcgatcg
     1021 ccctggcgat cccgttcatc ttcggcatgg agatgatccc gggggccgtg ttcctgctca
     1081 caatgcacgc cgtcaacggc acgagcgggc agatctccag catcatgttc ggcgtgcccg
     1141 gcgacggcga cgacgccgcc accaccatcg acggctatcc catggccaag aagggtgaag
     1201 cggggcgcgc gctcggcgcc agcatcaccg cgtcgggggt cggtggcatc atcggcgccg
     1261 tcgtcttcgc ggtgatgatc ccgatcctcg agcccgtcgt gctcgccttc agcccggccg
     1321 agttcttcct gctggccgtg ttcggcatca cgctgatcgc cttcctggcc ggcaagggca
     1381 acatcttcaa gggcatcatc gtcggccttt acggcatgat gctcgccacc attgggatgg
     1441 acccgcagac gggcacggca cgtttcgccg gcgactacct gttcatgtgg gacgggatca
     1501 gcctcgtcac cgccgtcctg gcgctgttcg ccgtccccga gatgatcgcg ctcggcgtca
     1561 aaggcggctc gatcgcttcc gtctcgatgg aagccgcgcg cttctcttac cgtcagcttt
     1621 ttcagggcgt gctcgaggtg ccgcggcatt ggtggctcac gcttcgcacc tccatcatcg
     1681 gcgccatcat cggcatgatc ccgggcctcg gcggctcggc cgcggcgtgg atgtgctacg
     1741 gccacgcggt gcagacgtcc aagcaccccg aacgcttcgg ccacggcgcc gtcgaaggcg
     1801 tgatcgcgcc cgagactgcg agcaacgcca aggaaggcgg gtcgctgctg ccgaccctgt
     1861 tcttcggcat tcccggaagc tcgggcatgg ccgtgatgat gggcgctttc ctgatcctcg
     1921 gcatccagcc cgggccggcc atgatcacgc agcatctcga cctcgtctgg acgctgatct
     1981 gggcgctcgt ggtcggcaac atcatcgccg tgagcttcct tctgttcatc acgcgctggg
     2041 tggcggtgct caccttcgtc aacggcgcct atctcgtgcc cttcatcatc gtcctggtgg
     2101 cgctcggtgc gttcgtgagc gaaggacgct gggaaaacct cgtcattctc ctggtgctga
     2161 gcacgatcgg ctacctgctc ctgcgcgccg actggccgcg cgctcccttc gtgatcggcc
     2221 tggtcctcgg caagatcgcc gaagagtcgt tgcacaaggc cctgcagctg tggggcatgg
     2281 aattcttcgt gcgcccgctg tcgctggtgc tgatcgcaat gatcacgatc acgatcgcct
     2341 tcgcggtcta ccagaatctc aggcctgcca agatccgcca gcccataggt gccgcatgaa
     2401 ctggctttcg cggtcggcca tgaccttcat catgctggcg atcttcgtga cgatggtgtg
     2461 gatcgcgagc ggttaccccg ccaacgcccg tttcatgccg ttcgtcgtcg gcatcccggc
     2521 gatcggcctc tgcctgttgc agctcgtgct cgacgcgcgc tcgcgccggc cggtcgccgc
     2581 cgccgacacg cgcgggacgt tcgagaaggc cgagcagacc gtctccgaga tggtcggtcg
     2641 ccaggtcaat ttcgaggtcg cgcgggagcc gatgcccgtt gtcgagatcg aacccgagct
     2701 ttccccgcgc gagacggttc ggcgcgagct gaccttgtgg ggctggttcg tcggcttcat
     2761 cgccggcatc ctgctgttcg ggttctgggt caccatcccg atcttcctga ttttcttcct
     2821 gcggctgcag gcgcggtcga gctggggcct ggcgctgggg ctcggcctcg gggtgaccgt
     2881 tctcctgttc ctggcgtttt cgatcgcttt ccgcatcgaa gttcaccctg gattcatcac
     2941 gggctacgtg caggactatt ttcaggggta ggccgattgc gcagggctcc ggggctacgt
     3001 aaattccggc ccgacaaagc tcgggccgcg ctggtcgcgg ccctgacaat caacatgcat
     3061 cggaggaaca gatgttcagc acaagatcgt ggatgtcgtt gcttgctgtg gcaggggcgt
     3121 gcgccacgtt gattgcctcg ccggcgatgg cccagcaggg cgctgatttc tacaagggca
     3181 agacggtcac ctacatcgtc gcgacggcgc cgggcggcgg ctacgatgct tatggccgcc
     3241 tcgtcgccga atacatgcag aaatacctgc ccggctcgac cttcgttgta cgcaacatgc
     3301 ccggcgcggg gcacctgatc ggtgccaatg cgatctacgc atcgcgaccg gacgggctca
     3361 ccatcggcac cttcaacacg ggcctgatct acaaccagct gctcgggctc gagggtgtca
     3421 ggttcgatct cgccaagatg tcgtgggtcg gcaaggcggc cgccgatccg cgcgtgctca
     3481 tcgtggccca gcagtcgccc atcaagacgt tcgaggattt gcgcagccag aagaaccagg
     3541 tcaacttcgc cacggccggc atcggcagcg cgtcctacgt cgagacggtg atgctgacca
     3601 acgccctgaa gctgccggtc aaggtgctca ccggctacaa cggcaacgag gaccagctcg
     3661 ccatgcggcg cggcgaggtc gtgggctcga tcgcttcgcg gtccacctac gagcaattcg
     3721 tcaagaacgg tttcgggcac ttcgtcgccc agatcggcgg caacgacacg gacgtgccgc
     3781 agctcgcctc ccaggtcacc gaccctaccg gcaagaagct gatcgcgctc gtccagtcgc
     3841 agggcgacat cgcgcgcctc acggctggcc cgcccggcat cccggccgac cggctcgaag
     3901 ctttgcgcgc cgcctacaag aaggcgatgg aagacaagga cctgcaggcc aaggccgaga
     3961 agctcgagcg gccggtcgag ccggcttatg gcgaggacgt ggcgaaagcc gtgcgcgagg
     4021 ccctgagcca gacgcctgaa accgtcgccg tgctcaaggc ggcgatggag aagaaggacg
     4081 ccccggcagc ggccgccgcg ccggccatga agggcacgat cgccgagttg aaggacggca
     4141 accgcaagct cgtcctcaag ctcgccgacg gcaagacctt cgaagccgag atatcgggat
     4201 cgcgcaccga gatcacggtc gcggggcaga agagcgaccg caacggcatc aaggccggca
     4261 tgacctgctc ggtcgacgcg ccgagcagcg gtgccgaagc caaggccatc gcctgcaact
     4321 gattttttgc acggagccag gaccacccgg ctccaccctt cccacgccat ccggggcggg
     4381 atcgttcaga gcggacggtc ccgccctcat ttttttgcag tgcgcgtgag cgtcaggagg
     4441 ccggcgcggc ctcgcgcttc ccggcttcgt gcgcttcttc ccgcggctcc ggaatcaggc
     4501 ggtcgcggtc gcgcaggttg ggaaacaggc gcgcccacag gacggcgagc ccgatgctcg
     4561 cgatgccgcc gatgatcacg gtcggaaccg cgccgatcaa ggcggcgacg gcgcccgact
     4621 cgaactcgcc gagagagttc gaccctcccg tcagaaacga attcacggca gcgacccggc
     4681 cgcgcatcga gtcgggcgtg tcgatctgca ccagcgtcat gcgcacgacg aggctgacca
     4741 tgtcggcggc gccgatgacg aacatgcatg ccgccgacag gaagaagttt gtggacagcc
     4801 cgaagacgac cgtcgccagc ccgtaaacgg cgactccctg gagcagccgc atgccggcgc
     4861 ggcgatcggt cagcggccag tgcgccagga gcgtggccat gcacagcgcg ccgaccgcct
     4921 gcatgctgcg cagcaccccg acgccccacg gtccgacatt cagaacctcc tgcgcgaaga
     4981 tcggcagcag tgcggtgacg ccgccgaaca tcacggcgat gaagtcgagc gtgatcgcgc
     5041 cgaggatcac gggcttcgag cggatgaagg tcagccctgc cgccaacgtg cgcaagctca
     5101 ccttctcgcg cgccggcttg accgtgtggg cgcggatcgc cgccgtgaac agcgtcgccg
     5161 cgaaggctgc caaccctgcc gccgcaaaag cgagcccggc gtcgaccgcg tagagcagtc
     5221 cgcccaccgc gggacctgag atcgtggccg tttgcgagat cgtctggtcc cacgccaccg
     5281 cgttggcgaa gcgttcgcgc ggcacgaggt tggcgaccat cgcctggctc gcaggattgc
     5341 cgaatgcccg cgccgcgccg gcgaccgcga cgagcccgta aacgggccac atcgacgaaa
     5401 tgtcgaacca ggcacacacg aacagccctg cggccgcaag cccggatacg gcatccgtga
     5461 ccatggcgac gacgcgccgg tcgtaagcgt cggccacgtg cccggtgaac agcaccagcg
     5521 ccatcgacgg cgcgaacgtg aacagcccgg tgaggcccag cgcccacgcg ctttgcgtga
     5581 cgtcgtacac gaacaggccg acggcgacgt tctgcgcctg ccgggcgagt ccgatcagga
     5641 agcgtgctgc acaaaagaac cggaagtcgg cggactgaaa cgcagcccag cctgcggacg
     5701 tggcgagacc catgcgggcg ggtctcctgt gcggggcagg c
//
LOCUS       DATAIQ010000262         2008 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_290938, whole genome shotgun sequence.
ACCESSION   DATAIQ010000262 DATAIQ010000000
VERSION     DATAIQ010000262.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2008)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2008)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2008
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_290938"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1306)
                     /gene="gcvPA"
                     /locus_tag="VHN20_04510"
     CDS             complement(<1..1306)
                     /gene="gcvPA"
                     /locus_tag="VHN20_04510"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003609014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004375 - glycine dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0006546 - glycine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase
                     subunit GcvPA"
                     /protein_id="HEX2725064.1"
                     /translation="MRYLPLTDTDRSAMLETIGVSHVDELFRDVPAEARLDGPIRDLP
                     LHASELSVERQLSALARKNVPAGEVPFFLGCGAYKHHIPASVDHLIQRGEFLTAYTPY
                     QPEIAQGTLQVLFEFQTQVARLLGCEVANASMYDGSTACWEAIGMARRITKRVKTLIS
                     SGLHPHYVSVCKTMARFTGDTLVTALPTLDAKTDVDTLLDGIDGETSAVVVQYPDILG
                     RVADLSALADAAHAKGALLIAVVTEPVALGLLKSPGEMGADIVVGEGQAIGVGLNFGG
                     PYVGLFACREKHIRQMPGRLAGETIDADGKRGFVLTLSTREQHIRREKATSNICTNSG
                     LCALAFSIHMTLLGEKGLRQLAELNNARAASLAKRLSALPGVQLVNELFFNEFTLELP
                     VEARPVVHRMVEQGVLGGVSLGRLYPGVEHLKNGLVVAVTETA"
     gene            complement(1312..>2008)
                     /locus_tag="VHN20_04515"
     CDS             complement(1312..>2008)
                     /locus_tag="VHN20_04515"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX2725065.1"
                     /translation="RVGGFVPALGAAALDLLRPQPGEHILDIGCGDGTLTLKIKEAGA
                     EVVGIDNSLSMIGAAREKGLDARLMDAAELKFSEAFDAAFSNATLHWILAKDRAARAI
                     WFALKPGGRFVGEMGGSGNLAALRQHLDDELVERGFGPPTYAANWYPSPEEFAAVYES
                     AGFRDVEAELIDRPTPLEHGVEGWVIAFRAGWLDRAGVPPEERPAVAAAVAKRHGNNV
                     ADYVRLRFTMRKP"
BASE COUNT          362 a          665 c          647 g          334 t
ORIGIN      
        1 tcgcggtttc ggtcaccgcc acgaccaagc cgttcttgag gtgctcgaca cccggataaa
       61 gccggccgag cgatacgccg ccgagtacac cttgctccac catgcggtgc accaccggcc
      121 gtgcctcgac cggaagctcc agcgtgaatt cgttgaagaa cagctcgttg accagttgga
      181 cgcccggaag ggcggacagc cgcttggcaa gcgatgccgc gcgggcatta ttgagctccg
      241 caagctgacg cagtcccttc tcgccgagca aggtcatgtg gatcgagaaa gccaatgcgc
      301 agagccccga gtttgtgcag atgttgctgg tcgccttctc acggcggatg tgctgctcac
      361 gggtcgagag tgtcagcacg aagccgcgct tgccgtcggc atcgatggtc tcacccgcca
      421 gacgcccggg catctgacgg atgtgcttct ctcggcaggc gaagaggccg acgtagggcc
      481 cgccgaagtt gaggccgaca ccgattgcct gaccttcgcc gaccacgatg tccgcgccca
      541 tctcgcccgg gctcttcagc agtcccagcg caaccggctc cgtcaccact gcgatcagca
      601 gcgcaccctt ggcatgcgct gcatcggcga gcgcggagag gtcggccacc cgacccaaga
      661 tgtcgggata ttgcacgacc accgcgctgg tctcgccatc gataccgtca agcagcgtgt
      721 ctacgtcggt cttggcgtca agcgtcggca aggcggtcac cagcgtgtcg ccggtgaacc
      781 tggccatcgt cttgcacacc gaaacataat gcggatgcag cccgctgctg atcagtgtct
      841 tcacccgctt ggtgatgcgc cgggccatgc cgatcgcttc ccagcaggcg gtcgagccgt
      901 cgtacatgga cgcattcgcc acctcgcagc cgagcaggcg ggcgacctgg gtctggaact
      961 cgaacagcac ctgcagcgtg ccttgcgcga tctccggctg atagggcgtg taggcggtca
     1021 ggaactcacc gcgctggatc agatggtcga cgctggccgg gatgtggtgc ttgtaggcac
     1081 cgcagccgag gaagaagggc acctcgcccg ccggcacgtt cttccgcgcc aatgcgctga
     1141 gctggcgttc gacggacagt tcggacgcat gcagcggaag atcgcggatc ggtccgtcga
     1201 ggcgagcctc ggcaggaacg tcacggaaca gctcgtcgac gtgggatacg ccaatggtct
     1261 cgagcatggc cgaacggtcg gtatcggtga ggggcaggta acgcatgggg cttagggctt
     1321 cctcatggtg aagcggagac ggacgtaatc ggcgacattg ttgccatggc gcttggcgac
     1381 ggcggcggcg acggcggggc gctcttcggg tggcaccccg gcccggtcga gccaacctgc
     1441 gcgaaaggct atgacccacc cctcgacgcc gtgctccagc ggtgtcgggc ggtcgatcag
     1501 ctcagcctcg acgtcgcgaa agccggcgct ttcgtagacg gcagcaaact cttcggggct
     1561 cgggtaccaa ttggcggcat aggtgggcgg accgaagccg cgctcgacga gctcatcgtc
     1621 caggtgctgg cggagcgcgg cgagattacc ggaaccgccc atttcgccga caaaccggcc
     1681 gcccggcttc aaggcgaacc agatggcccg cgcagcccta tccttggcca ggatccagtg
     1741 cagagtcgcg ttggagaagg ctgcatcgaa ggcttcggaa aacttcagct cggccgcatc
     1801 catcagccgg gcatccaggc ccttctcacg cgccgcgccg atcatcgaca ggctgttgtc
     1861 gatcccaaca acctccgccc ccgcttcctt gatcttcagc gtcagcgttc catcaccgca
     1921 gccaatgtcg aggatatgct cacccggctg cggccggaga agatcaagcg ccgccgcacc
     1981 gagcgccggc acgaagccgc ctacccgc
//
LOCUS       DATAIQ010000263         3900 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_382827, whole genome shotgun sequence.
ACCESSION   DATAIQ010000263 DATAIQ010000000
VERSION     DATAIQ010000263.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3900)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3900)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3900
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_382827"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(50..571)
                     /locus_tag="VHN20_04520"
     CDS             complement(50..571)
                     /locus_tag="VHN20_04520"
                     /inference="COORDINATES: protein motif:HMM:NF018684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme inhibitor LprI family protein"
                     /protein_id="HEX2725066.1"
                     /translation="MKFRHRFLGFALTAALGLAAPETRAQAPDGNVTAADRATIAACI
                     RESAEQPRACIGAIAVTCARQTSGERRDTEIACTRREAAVWRERLDFATSALSQRLAS
                     ASRSRFGAVQRSWEEYVALRCAFTGEIETPARAPVMQAGCELRAVAARAIEIETIARR
                     RMQPSQARPQLQR"
     gene            complement(660..1364)
                     /locus_tag="VHN20_04525"
     CDS             complement(660..1364)
                     /locus_tag="VHN20_04525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015928568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease activity regulator RraA"
                     /protein_id="HEX2725067.1"
                     /translation="MTLDKTIADALRATSTGTITTILLKKGIRRSWMQGPAAIFNAGE
                     RIVGRAFTLRFVPMREDLATPESWSSPRSTRGAIEEMPEGCIAVADAMGVTEAGIFGD
                     ILCARMHMRKVAALVTDGVMRDGAGCEGTGLPIWCSGVAAPPSVAGLTFVGWQEPIGC
                     GGVAVFPNDVIVADGDGAVVIPAAYVEEVAMAGPEQEMLELWIMREVEKGTPLPGLYP
                     PNAETKARYEAEKGRG"
     gene            complement(1525..2358)
                     /locus_tag="VHN20_04530"
     CDS             complement(1525..2358)
                     /locus_tag="VHN20_04530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEX2725068.1"
                     /translation="MPLAPLVHANGAAIPAIGLGTWRLEGDACVQVIQWAIEAGYRHI
                     DTAAMYGNEEAVGAGLRACGLPRDEVFVTTKVWPEDLAPGDLERSAEASLRRLRLEAV
                     NLLLIHWPNLRIPLRGTIEALCRVKRRGLARHIGVANFNVRLLEEAVALAGEPLVTNQ
                     CEYHPYIDQGPVLAACRGRGLSLTSYCPLGRTAVLSDPVVRKIASAHDRTPAQVILRW
                     HVQQPGVVAIPKSGDRQRLAENISILDFALGDEEMRAISALARAEGRLVSPAWAPAWD
                     T"
     gene            complement(2365..3225)
                     /locus_tag="VHN20_04535"
     CDS             complement(2365..3225)
                     /locus_tag="VHN20_04535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015799700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartyl/asparaginyl beta-hydroxylase
                     domain-containing protein"
                     /protein_id="HEX2725069.1"
                     /translation="MSSSVETDRALPDRAGPQQSFVTPGLEPSMVRPSLVTRVFMRIV
                     AFAERLNLACAKVGNPPVYDNATFPWVAGIEHDWPLIRAELDRLLVRQHELPAFQSIA
                     TDVKTITKDDHWKTFFLTGFGVTSERNVAQCPDTWRVVQKIPGLVTAMFSIFEPGKHL
                     PPHRGPYNGVLRLHLGLIVPEPGDRLGIRVAQQICRWQEGKALVFDDAYEHEAWNHTD
                     KTRVVLFVDFVKPLHFPANLLNWLLMNLAVFAPFIREGMENHNAWEKRFYAEADALRN
                     PPKPPVPTRG"
     gene            complement(3415..>3900)
                     /locus_tag="VHN20_04540"
     CDS             complement(3415..>3900)
                     /locus_tag="VHN20_04540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019195887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX2725070.1"
                     /translation="DNVLGRVGKGVGVLMSGLDYERVVLAAGPLGIMQACLDAVLPYV
                     HARKQFGQPIGSFQLVQGKLADMYVTLNASKAYVYAVARACDRGDTAREDAAGAILYA
                     AEKATQCALDAIQLLGGNGYINDYPTGRLLRDAKLYEIGAGTSEIRRMLIGRELFEKT
                     A"
BASE COUNT          611 a         1288 c         1398 g          603 t
ORIGIN      
        1 aatagaagaa cacgaaggat cctatcgcgc gcgcgatgcg aaccgcggct cagcgctgca
       61 gctgcggccg cgcctggctg ggctgcatgc ggcggcgggc gatcgtctcg atctcgatgg
      121 cgcgggcggc gacggcgcgc aattcgcagc ccgcctgcat caccggcgcg cgggccgggg
      181 tctcgatctc gccggtgaag gcgcagcgca gggccacgta ttcctcccag ctgcgctgca
      241 cggcgccgaa gcggctgcgc gaggcggatg cgagtcgctg cgacagggcg ctggtcgcaa
      301 aatcgagccg ctcgcgccag acggcggcct cgcggcgggt acaggcgatc tcggtatcgc
      361 gccgctcgcc gctcgtctgc cgggcgcagg tcacggcgat cgcgccgatg caggcgcgcg
      421 gctgctcggc gctctcgcgt atgcacgccg cgatggtggc gcggtcggcg gcggtcacgt
      481 tgccgtcggg cgcctgcgca cgcgtttccg gtgcggcgag gcccagagcc gccgtcaggg
      541 cgaatccaag aaagcgatgg cgaaatttca tgtcggagcg atcgtggccg aacaaggcgc
      601 ggtcaaggcg tggcgatacg gactgtctgc aacagccatg gccagggttt gcagccgcgt
      661 cagccgcggc ccttctcggc ctcgtagcgg gcttttgtct cggcattcgg cggataaagg
      721 cccggcaagg gcgtgccttt ctcgacctcg cgcatgatcc acagctcgag catctcctgc
      781 tcgggcccgg ccatggcgac ctcctcgaca tacgcggccg gaatcaccac cgcgccgtcg
      841 ccgtcggcga cgatgacgtc gttcgggaac accgcgacgc cgccgcagcc gatcggttcc
      901 tgccagccga cgaaggtcag gccagcgacg gacggcgggg cggcgacgcc cgagcaccag
      961 atcggcaggc cggtgccctc gcagccggcg ccgtcgcgca tcacgccgtc ggtgacgagg
     1021 gcggcgactt tgcgcatgtg catgcgcgca cacaggatgt cgccgaagat tcccgcctcg
     1081 gtcacgccca tggcgtcggc gacggcgatg cagccctcgg gcatctcctc gatggcgccg
     1141 cgggtggagc gcggcgagga ccacgattcc ggggtcgcca ggtcctcgcg catgggcacg
     1201 aagcgcaggg tgaacgcgcg cccgacgatg cgctcgccgg cgttgaagat cgcggccggg
     1261 ccctgcatcc agctgcgccg gatgcccttt ttcagaagga tggtggtgat ggtgccggtc
     1321 gaggtggcac gcaacgcgtc ggcgatggtc ttgtcgaggg tcatgtccgg ctcggctgaa
     1381 atggagggga gggcggcctc atgctctaca gcatgatccg gcgaaaggca gccccatcgc
     1441 cccgggccgg ggaagggaag catcgcatgc acaagcgcac ccctttccca ctggggatga
     1501 gtaaccgcgg gtgaatgacc ctgtctacgt gtcccaggcg ggcgcccagg ccggcgatac
     1561 caggcgcccc tcggcgcggg ccagcgcgga gatggcccgc atctcctcgt cgcccagcgc
     1621 gaaatcgagg atgctgatgt tctctgcgag gcgctgccgg tcgcccgatt tcgggatggc
     1681 gacgacgccg ggctgttgca cgtgccagcg caggatgacc tgggccggcg tcctgtcatg
     1741 cgcgctggcg atcttgcgca caaccgggtc ggacaagacg gccgtccggc caagcgggca
     1801 ataggaagtc agcgaaaggc cacgtccgcg gcaggcggcg agcaccgggc cctggtcgat
     1861 atacgggtgg tactcgcact ggttggtgac cagcggctcg ccggcgagcg cgacggcctc
     1921 ctcgagcagt cgcacgttga aattggccac gccgatgtga cgggcgaggc cccggcgctt
     1981 gacccggcac agcgcctcga tcgtgccgcg cagcgggatg cgcaggttgg gccaatggat
     2041 cagcagaagg ttcaccgctt cgaggcggag ccgcctgagg ctcgcctcgg ccgagcgttc
     2101 cagatcaccc ggcgcgaggt cctcgggcca caccttggtg gtgacgaaaa cctcgtcgcg
     2161 cggcaggccg caggcgcgga ggccggcccc gaccgcctcc tcgttgccat acatggcggc
     2221 ggtgtcgata tgccggtagc cggcctcgat cgcccactgg atcacctgga cgcatgcgtc
     2281 gccctcgagc cgccacgtgc cgagcccgat ggccggaatg gcggcgccgt tggcgtggac
     2341 gagcggcgcg agcggcatgg gccatcaccc tcgggtcggg acggggggct tgggcgggtt
     2401 ccgcagcgcg tcggcctccg cataaaaccg cttctcccag gcgttgtggt tttccatgcc
     2461 ctcgcggatg aacggcgcga acacggcgag gttcatcagc agccagttga gcagattggc
     2521 gggaaagtgc agcggcttga cgaagtcgac gaacagcacg acgcgggtct tgtcggtgtg
     2581 gttccaggcc tcgtgctcat aggcgtcgtc gaagaccagc gccttgcctt cctgccagcg
     2641 gcagatctgc tgggcgacgc ggatgccgag ccggtcgccc ggttccggca cgatcaggcc
     2701 gagatgcagg cgcagcacgc cgttgtaggg accgcgatgc ggaggcaggt gctttccggg
     2761 ctcgaagatc gagaacatgg ccgtgacgag gcccgggatt ttttgcacca cgcgccaggt
     2821 atcgggacat tgcgcgacgt tgcgctccga cgtgaccccg aagccggtca ggaaaaaggt
     2881 cttccaatga tcgtccttag tgatcgtctt cacgtcggtg gcgatggact ggaaggccgg
     2941 cagctcgtgc tggcgcacga gcaggcggtc gagctcggcg cggatcagcg gccagtcgtg
     3001 ctcgatcccg gccacccacg ggaaggtggc attgtcgtag acgggcgggt tgccgacctt
     3061 ggcgcaggct aggttcagcc gctcggcgaa agcgacgatg cgcatgaaca cgcgcgtcac
     3121 gaggctcggc cgcaccatgc tcggctcgag cccgggcgtg acgaagctct gctgcggccc
     3181 cgcgcggtcg gggagggctc ggtccgtctc gacgctgctg ctcaagatct gctccactcg
     3241 gcattttacg gaatcggccc agtttagtgc tgccggcttt tgccgcaacg cagtgaaccg
     3301 gtgcgcaatg cagcgctgga ccggcgcgca atgcatgccg caccggccgc ttcgaagggg
     3361 cgtcgtacct gcaacgagcc gcgcaccggt gcacgggaca gcgcgcacca acgcctatgc
     3421 cgtcttctcg aacagctcgc ggccgatcag catgcgccgg atctcgctcg tgcccgcccc
     3481 gatctcgtag agcttggcgt cgcgcagaag gcgtcccgtc gggtagtcgt tgatgtagcc
     3541 gttgccgccg agcagctgga tggcgtcgag ggcgcattgc gtcgctttct cggcggcgta
     3601 gaggatggcg ccggccgcat cctcgcgcgc ggtgtcgccg cggtcgcaag ccctggcgac
     3661 ggcgtagaca taagccttcg atgcattgag ggtcacatac atgtcggcca gcttgccctg
     3721 cacgagctgg aaactgccga tcggctgccc gaactgtttg cgcgcatgca cgtaaggcag
     3781 gaccgcgtcg aggcaggcct gcatgatgcc gagggggccg gcggcgagca cgacgcgctc
     3841 gtaatcgagg cccgacatca gcacaccgac ccccttgccg acccggccga gcacgttgtc
//
LOCUS       DATAIQ010000264         3655 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_290979, whole genome shotgun sequence.
ACCESSION   DATAIQ010000264 DATAIQ010000000
VERSION     DATAIQ010000264.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3655)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3655)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3655
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_290979"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..625)
                     /locus_tag="VHN20_04545"
     CDS             complement(<1..625)
                     /locus_tag="VHN20_04545"
                     /inference="COORDINATES: protein motif:HMM:NF013053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine hydrolase"
                     /protein_id="HEX2725071.1"
                     /translation="MKDHLAALGVALIALSMTVPLSARADNVLAEWAGVKLPAAPEVK
                     AATVDPKRTALLLFDFTNQTCTPERRPRCAANVPNLQKLLAAARRQGMFVVYSVPGAG
                     ASAKDILAALAPAGDEPVLPPLGPDKFIGSDFESMLKGRGIDTLILTGTAAHTTVLHT
                     GGAAALRGFKVVVPVDGMASNEAFSELYTTWHLANAARIMNQVTLTTV"
     gene            859..1083
                     /locus_tag="VHN20_04550"
     CDS             859..1083
                     /locus_tag="VHN20_04550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725072.1"
                     /translation="MWPFHRVMLNREFGSLFNFNAIELPTRYVSKTRLEAEITPDLIS
                     EPGTYTVTVKAEGDVLPESHRAHLIVRFKE"
     gene            1261..1665
                     /locus_tag="VHN20_04555"
     CDS             1261..1665
                     /locus_tag="VHN20_04555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003569124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX2725073.1"
                     /translation="MEIRRSGSQASGKGPADWFTGAVRIDPLFQAADPARVAGAAVTF
                     EPGARTAWHTHPLGQTLIVTSGCGWAQREGGPVEEIRPGDVVWFPPGEKHWHGATATT
                     AMTHIAIQEALNGKTVEWLEHVSDAQYLAAKG"
     gene            complement(1668..1856)
                     /locus_tag="VHN20_04560"
     CDS             complement(1668..1856)
                     /locus_tag="VHN20_04560"
                     /inference="COORDINATES: protein motif:HMM:NF019303.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HEX2725074.1"
                     /translation="MTDRRAKIPISVLHGVQHVIHPPVMLKEWPRGDRRTRMVFITHD
                     IDEDALRASTRALAADHS"
     gene            2187..2983
                     /locus_tag="VHN20_04565"
                     /pseudo
     CDS             2187..2983
                     /locus_tag="VHN20_04565"
                     /inference="COORDINATES: protein motif:HMM:NF033580.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
     gene            complement(2985..>3655)
                     /locus_tag="VHN20_04570"
     CDS             complement(2985..>3655)
                     /locus_tag="VHN20_04570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015930709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HEX2725075.1"
                     /translation="VGAATTAIALIVIVSAKFAEGAWITIIVIPLTIMLLKAVRSYYD
                     ELESRLRKPGPLDLRGTDPPIVLVATEGWTEMTDKALALAMSLSRDVIGVHLSQLEGP
                     DDDARDLTLQAQWKQDVEEPARRAGLNPPRLMVLRAEYRAIHEPLLKLAKDLQAKFPG
                     RRIAVLIPELVKQRWYQTILHTFRASRLRNQLLKQGGPGLTVINVPWYLDAVETPARI
                     RAAA"
BASE COUNT          629 a         1182 c         1212 g          632 t
ORIGIN      
        1 tcacggtcgt gagcgtcacc tggttcatga tgcgcgcggc gttggcgagg tgccacgtcg
       61 tgtagagctc gctgaaggct tcgttcgatg ccatgccgtc gaccggcacc accaccttga
      121 agccgcgcaa ggccgcggcg ccgccggtat gcagcaccgt cgtgtgcgcc gccgtgccag
      181 tgaggatgag ggtgtcgatg ccgcggccct tgagcatgct ctcgaaatcg ctgccgatga
      241 atttgtcggg cccgagcggc ggcagcaccg gctcgtcgcc ggccggagcg agcgcggcaa
      301 ggatgtcctt ggcgctcgcc ccggcgccgg gcaccgagta gaccacgaac atgccctggc
      361 gccgggctgc tgcgagcagc ttctgcaggt tcggcacatt ggcggcgcaa cgcgggcgcc
      421 gctcgggcgt gcaggtctgg ttggtgaagt cgaacagcag cagggcggtg cgtttcgggt
      481 cgacggtcgc ggccttgacc tcgggcgccg ccggcagctt cacgcccgcc cattcggcga
      541 gcacgttgtc ggcacgggcg ctgagcggaa ccgtcatgga aagcgcgatc agagccacgc
      601 ccaacgctgc cagatggtcc ttcatgcatg cctccctcag gcaaccatga ccgaggattc
      661 cacaggcgcg cgtgcttcgc cagaaggcct tcagcgacgg gttacggtta tttaatgcgg
      721 ctgtaacccg gagcgcttcg ccgccgtgct tcaacaggcg gatcatccaa cggatcgcgc
      781 ggagcgttcg ctccggctac gaggtcggct ggcacgaagg cgaactcggg ttggcccttg
      841 cgggtgcgcg gcgaggggat gtggccgttc catcgcgtca tgctcaaccg cgaatttggc
      901 agcctgttca acttcaatgc catcgagctg ccgacgcgct acgtctcgaa gacgcggctc
      961 gaggcggaga tcacgccgga cctgatctcc gagcccggca cctacacggt gaccgtcaag
     1021 gccgagggcg acgtgctgcc cgagtcgcac cgcgcccacc tgatcgtccg cttcaaggaa
     1081 tagaggcttt tgagccgctg catggcctcc gcacggatgc gtagaacctt cggtgcgtcg
     1141 acgcgttggt gacgacaccc ggagggacgt gaatcccgtt ctggcgtcca tttgggatcg
     1201 gccggtgcgc ctctcgcccg gggagacgcg aaccgagccc atcactgacg ggaggcgacg
     1261 atggagatca ggcgaagcgg ttcgcaggcg tcgggcaagg ggccggccga ctggttcacc
     1321 ggcgcggtgc ggatcgaccc gctgttccag gcggccgatc cggcgcgcgt cgccggcgcc
     1381 gcggttacgt tcgagcccgg ggcgcgcacg gcctggcata cccatccgct cggccagacc
     1441 ctgatcgtca cgtccggctg cggctgggcg cagcgcgagg gcggaccggt cgaggagatc
     1501 aggccgggcg acgtcgtctg gttcccgccc ggcgagaagc actggcacgg cgccacagcg
     1561 acgaccgcca tgacgcatat cgcgatccaa gaggcgctca acggcaagac cgtcgagtgg
     1621 ctggagcacg tcagcgacgc gcaatacctc gccgcaaagg gctgatgtta cgaatggtcg
     1681 gcggctaagg cccgcgtcga ggcgcgcagc gcgtcttcgt cgatgtcgtg cgtgatgaag
     1741 accatgcgcg ttcggcgatc gcccctcggc cattccttca gcatgaccgg cggatggatc
     1801 acgtgctgca cgccgtgcag cacggagatc ggtattttcg cgcggcggtc tgtcatgggc
     1861 accgccgctt taggtcaagc gccgcgcatc cgcaacggat gggccccccc gtcttcgcgg
     1921 gaggcagcgg caatcatccg caagaaggtc tcggcgccgt aagagagcac gccgcgctgc
     1981 tgcgcgggtt ctagagcatg atccggcgaa gtggatgccg cttcgccgag aaaggcttgt
     2041 cccggacttg atccgggatc atgtggctca ataagaaata gagcgggatc gattcaatct
     2101 gaattgatcc gctctaggtc ataaactcat aattggggtt tcagtttttg gcgaacagtg
     2161 attcaagctc ctgaggagga gcttgcatga gcgcacgccg atatgaactc accgattttg
     2221 agtggtcgat catcgcgccg ctgttgccga acaagccgcg cggcgtccct cgcgccgatg
     2281 accgcaaagt gctgaacggc atctattggc gtctgcgcac cggctctcca tgggctgata
     2341 ttccggaacg ctacgggcca gcgacgacct gctacaaccg cttcgtgcga tggcgcaaac
     2401 tcggcgtctg ggaccgcatc ttcgcggctg tttcggccgc ttacgacggc gatctgcaga
     2461 tggtggacag ttcctcgatc cgcgtccatc agcacgccgc caacgtaaaa aagggggcgt
     2521 ccaagaaacc gccgctggga acgtcgctca cgcccgatgc atggggcgct cgcggggcgg
     2581 gctgaccacc aagagccacg ctcttgtgga tgccaacggc ctgccgatcg ccctcaagct
     2641 gagcgaaggc caagcccatg acggccgcag tgccgccgac ctgctcggcg ccatcggcag
     2701 aggccagatc ctgctggcgg atcgcgcata cgattgcgac agcacccgtg agcagctggc
     2761 caagcggggg gcctggggca acatcaagcc attggcgcat cgcaccaaca ttcccgcgtt
     2821 cagctcgttc ctctaccgct tccgcaacct cgtcgagcgc ttcttcaaca agctcaagca
     2881 cttccgggcc atcgcaacgc gctttgaaaa gcacgacgcc aactacctcg ccgcaatcaa
     2941 gctcgctgcc gctagaattt ggatgcgctt tatgagtcgg tgacctaggc tgccgcgcgt
     3001 atccgcgccg gcgtctcgac cgcatcgagg taccacggga cgttgatcac ggtgaggccc
     3061 gggccgccct gcttcagaag ctggttgcgc aggcggctcg cgcggaacgt atgcagaatg
     3121 gtttgatacc agcgctgctt gacgagctcc ggaatgagca cggcgatgcg cctgcccggg
     3181 aacttggcct gcaggtcctt tgcgagtttc agcagcggct cgtggatggc ccggtattcc
     3241 gcccgcagca ccatgagccg gggtggattg aggccggcgc gacgggcggg ctcctcgaca
     3301 tcctgcttcc attgcgcctg cagcgtgagg tcacgcgcgt cgtcgtccgg tccttccagc
     3361 tggctgagat gaacgccgat cacgtcgcgc gacaggctca tggcgagggc aagcgccttg
     3421 tcggtcatct ccgtccagcc ctcggtcgcc accagcacga tgggcgggtc ggtgccgcgc
     3481 aggtcaagag gtcccggctt gcgcaggcgc gattcaagct cgtcgtaata gcttcgcacg
     3541 gccttcagca gcatgatggt cagaggtatg acgatgatcg tgatccacgc cccctcggcg
     3601 aacttggccg atacgatcac gatcagcgcg atcgccgtcg tcgccgctcc cacgg
//
LOCUS       DATAIQ010000265         1558 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_52428, whole genome shotgun sequence.
ACCESSION   DATAIQ010000265 DATAIQ010000000
VERSION     DATAIQ010000265.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1558)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1558)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1558
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_52428"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..220
                     /locus_tag="VHN20_04575"
     CDS             <1..220
                     /locus_tag="VHN20_04575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="2-dehydro-3-deoxy-6-phosphogalactonate aldolase"
                     /protein_id="HEX2725076.1"
                     /translation="VVKAWRAVLPPDTLLFPVGGIKPDNMKGFVDAGADGFGLGSALF
                     TPDLAVREIAANAGRFVQAWGTVRRGAA"
     gene            complement(286..591)
                     /locus_tag="VHN20_04580"
     CDS             complement(286..591)
                     /locus_tag="VHN20_04580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725077.1"
                     /translation="MIPLVVDARWRRALLAAALGSTLQGVPAGAAQDRSRPLTLNVSP
                     SGIEEETEDQKLDRRLRQREYMFRSICIHCSSADRNASRAPFNPLDALAPARRSEPE"
     gene            1188..>1558
                     /locus_tag="VHN20_04585"
     CDS             1188..>1558
                     /locus_tag="VHN20_04585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012045656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030551 - cyclic nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HEX2725078.1"
                     /translation="MVQAPPPDKRAILGNHEFFRGLPSSIVQRLASHARQSHCAAGRR
                     IFSKGDEGHGLLAVLSGVVKISVPSEDGKEIVLNLIGANEIFGEIALLDGGLRTADAT
                     ALGDCELLVLDRRDVLPILME"
BASE COUNT          266 a          530 c          507 g          255 t
ORIGIN      
        1 ggtcgtgaag gcctggcggg cggtcctgcc gccggacacc ctgttgttcc cggtcggcgg
       61 catcaagccc gacaatatga agggcttcgt cgacgccggc gccgacggtt tcgggctcgg
      121 ctccgccctg ttcacgccgg accttgccgt tcgcgagatc gccgcgaacg cgggccgctt
      181 cgtacaggcc tggggcacgg tcaggcgagg cgccgcctga gtcgtcatcg gcggcggcag
      241 actgacgcat cgacgaagcg caagcggagc tgcccccagg aacggctact ccggctcgga
      301 tcgccgagcc ggggcgagcg cgtccagagg gttgaagggc gcccgcgagg cgttgcggtc
      361 ggcgctgctg caatgaatgc aaatcgaccg gaacatgtac tcccgctgtc gcagccggcg
      421 gtcgagcttc tggtcctccg tctcctcttc gatgccggag gggcttacgt tcaacgtcag
      481 cggccgcgac cggtcctggg ccgcccccgc cggaacgccc tggagcgtgc tgccgagcgc
      541 tgccgcaagc agcgcgcggc gccagcgggc gtcaacgaca agagggatca tgactgtagg
      601 gtccgcgccg gctcgatgga ttcgcggcgc ccgcgaatcg ccgagggtta tatcgtttcc
      661 agatcgtgaa cggagagctg cgatgccgcg cgtcgtgtgc gccagcgcac acgcgagccg
      721 acctttgccg ctcataacag gccgcaggca gagttttcgc ctcatcagtc agcgtggcgt
      781 tcagacgaat ggagggcagc aatgcgcatc cccgacaacc ttctcccgat ttaccggctc
      841 tcggtcgtcc tcggcggggc gatgctgttt gccggctcgc tcgccttctg gaccagcatc
      901 attcactaga gccatgaccc gacgcgagca tgccccgggt tcaatccggg atcatgcgac
      961 ccaagacagc aaggcgggat cgtttcaatc tgaagtgacc ccgcgcaagg cggatggcgc
     1021 acccggccga tgaccggacc ggccccacat ctctgcccct gaatcgggca gaaagaggtc
     1081 gccccggctc atccaggcca tgaccaggag tgaggccagt gcacgttcac gagaacaacc
     1141 gaaccagata tcatccggcc gagcgtatct gcagcggaac cgcgatcttg gtacaagccc
     1201 cgccgcccga caaacgggcc attctcggca accatgaatt ctttcgcggc ctgccgtcgt
     1261 caatcgtcca acgcctcgcg tctcacgcac ggcagtcgca ctgcgcggcg ggacggcgca
     1321 tcttctcgaa gggcgacgag ggtcacggtc tgctggcggt cctctccggc gtcgtgaaga
     1381 tcagcgtccc atccgaggac ggcaaggaga tcgttctcaa cctgatcggc gccaacgaga
     1441 tcttcggcga gatcgcgctt ctcgacggcg gcctccgcac ggcggatgcc acggcgctcg
     1501 gcgactgcga gcttctcgtt ctcgaccgcc gcgacgtgct gccgatcctc atggaaga
//
LOCUS       DATAIQ010000266         8853 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_429012, whole genome shotgun sequence.
ACCESSION   DATAIQ010000266 DATAIQ010000000
VERSION     DATAIQ010000266.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 8853)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8853)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8853
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_429012"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..757
                     /locus_tag="VHN20_04590"
     CDS             <1..757
                     /locus_tag="VHN20_04590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725079.1"
                     /translation="MNLYANNDFVFNNSYVFSDRFSDDQNYFKPRDDLAPDPVRGLAM
                     RRTNIVPDIVNCELPLDNRRSPGYRRIEPHMAGNRFYTWIGQHETGRYSKAHKHASAA
                     VLICVKGRGYTYTWPSELGPTPWRDGKADQVFRVDYEPVGMVSAAPMSGDWFHQHFGT
                     SKEALRLTAWFGPNNSRSRKPGRPGEQQKDLGAIDIRDGGSAIPYDEEDPHIRQEYEA
                     TLAKEGATSRMEAWLYEKPKAGEQRPMTDFVGL"
     gene            complement(826..1590)
                     /locus_tag="VHN20_04595"
     CDS             complement(826..1590)
                     /locus_tag="VHN20_04595"
                     /inference="COORDINATES: protein motif:HMM:NF013353.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0036361 - racemase activity, acting on
                     amino acids and derivatives [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/glutamate racemase family protein"
                     /protein_id="HEX2725080.1"
                     /translation="MRILFLNQSPKNPAYDVAEIEAQLNGYASPGTKVEIGFPDDFGG
                     SKLYDSIGKQSVLNGLHHMMETPSIIQKIFWASQNGYDAVISSNTFDPGVDGGRLAVD
                     IPVIGLFRASMHAALILADRVGITVPLASHVPYTWRILRSNGLDRFVSGIKPIGVYGK
                     DIKQRKNEIFDITERLIRSLVEDTGAEIILPLGGALIPYVVDPDDLARATGVQVLNTK
                     AIGIRFAEMCVAFGMTQSALAYPRAKLDAADFRERV"
     gene            complement(1602..2621)
                     /locus_tag="VHN20_04600"
     CDS             complement(1602..2621)
                     /locus_tag="VHN20_04600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725081.1"
                     /translation="MRKMVSLLAAMLLTALAGAASAQSVEEFYRGRQIRFIIASDAGG
                     DYDQWGRLIARYWGKHLPGKPTFVPVNMPGGGMLTATNYLFNVAEKDGSVVGMIGRNL
                     PNQALLKHASVRFDPLKFNWLGSPELTNRVCVAAAGAPVQKAEDLYNRELIVGGSGAG
                     TAVSSTPVILSRLLGMKFKLVDGYPGGQAILLAMDRGEVQGICQSYTSLRGSKPDWFA
                     TGKVKVLFNLERTPLPDKTAPTIYEFIKDEDARRVLSLYNSSVEIGRPILAPPGVPAD
                     RVEALRRAFDATMQDPELKAEAAKRGLEINALTGEQLGEIIDDLMNTPKEIVDKMQAL
                     VQSKN"
     gene            complement(2732..4126)
                     /locus_tag="VHN20_04605"
     CDS             complement(2732..4126)
                     /locus_tag="VHN20_04605"
                     /inference="COORDINATES: protein motif:HMM:NF015905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HEX2725082.1"
                     /translation="MARHDTSTESTPSGVRDLAQWALSVRVEDISAQALAQAKLLLLD
                     TLGCCFPASAIGTGRAVIEMLADIRGQPQCSVIGTTWKASMPDAVFTNGVLLRALDLN
                     DYVVEPDGSIGGHPSDNIPVAVAAGESAGRTGPDILAAIVVGYEVFGHFRSMMERRSA
                     WDGVSASAVAAPLMAGRLIGLDRRELAHAIALSLSRAATSAVVRAGDISAAKSLANAL
                     VAQHGVYCALLARHGVTGPLCILEHPRGMKAVFPKFDGIARPACPEQADSYVMKAQIK
                     TYPCVATAQGAVAAALELHRVLGGDVDRLRRIRVVMADYPNVREHQADPDRANPTSHN
                     AADHSLAFLITVSLLDGALGPAQFENERWAHPTVREMMSRLEFATDATLSRRAPLTYP
                     CVLEAQEATGEDHRVEVLFPPGFSRARLDPDVVMQKFRTLTAGYLDAAAAERMIESIM
                     RLDQPGSRLDLAAG"
     gene            complement(4141..5625)
                     /gene="tcuA"
                     /locus_tag="VHN20_04610"
     CDS             complement(4141..5625)
                     /gene="tcuA"
                     /locus_tag="VHN20_04610"
                     /inference="COORDINATES: protein motif:HMM:NF006130.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent tricarballylate dehydrogenase
                     TcuA"
                     /protein_id="HEX2725083.1"
                     /translation="MSQRENCDIIMIGGGSAAFESAIAAKTAGAGRVVMLEKAPEAEF
                     GGNARFSHTGFRFVHTGAEEIRGFVPDLDEDTFRRMHIPAYSEDDFLADLNRVTQGRI
                     DPVLARAFVGHSNAAVHWMKEIGIRWEMEKTIKVGDKLYFEPGINIHPVGGGLGMLKQ
                     LRDIALKNGVEIRYESKVRAVHGDQWHVEGVRVSTASGEYDLSAKGVICCSGGFQANA
                     EMRARYLGPNADLVRVRGSKHNTGEVLHMMLELGAKSAGHWQGAHMTPIDSAAPPFET
                     PLLESGRGNTMNRYDYPYGITVNSLGQRFYDEGEAKHSYTYAKTGRAVLAQPGSAAFQ
                     IYDQTGIDLFRHGRDYQATMFEADTIAELAKKIGIEPAVLVHTVDEFNAACRGDVPLD
                     PRKLDGKCTTGISPPKSNWAEPIVRGPFRAYPITAGITFTFGGLQVDAKAQVISTSHK
                     PIHGLYASGDVVGLFFHNYPSCTGQTRNAVFSFLAGRNAAALRN"
     gene            complement(5690..7054)
                     /locus_tag="VHN20_04615"
     CDS             complement(5690..7054)
                     /locus_tag="VHN20_04615"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF021127.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0045227 - capsule polysaccharide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CapA family protein"
                     /protein_id="HEX2725084.1"
                     /translation="MSYASAAGNFSIAVAGDCMLTRSLKTFDEPAFLAVRDKFRDCDA
                     GFVNLESVVRRWDEGTPGITQGTFMTTPPELLHDMKWFGINMVSCANNHAFDYGEGGV
                     LATLSHLDAAGIAHAGSGRNLAEARMPAYLDTKGGRVALLATTATFRPWNRAGAQRPD
                     LRGRAGINPFHSASTYTVDGEAFEALKRMSRELGLDQTRARDRTHFYSDSEAPADRAE
                     ELSIFGQQFVRGERFTLTSAGNEADAEDNLRWIREARRQADWVVVSFHSHGFSQRSMA
                     TAKTRIDLHEPADFIPDFAHAAIDAGADIFVGHGSHTPLGLELYRGKPIFYSLGNLVL
                     QNETVPFFPEEAYARFGLGHDATPADFLDARTDGGRKGHVAHAGFWENIFATCHFESG
                     KLAEIRIVPIDQGFGQPRGQRGRPVLATGDMARRIIERVGRLSEPYGVQIRVIDGIGV
                     VRAD"
     gene            complement(7135..>8853)
                     /locus_tag="VHN20_04620"
     CDS             complement(7135..>8853)
                     /locus_tag="VHN20_04620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HEX2725085.1"
                     /translation="EASQFGGKSDIPAKITQQGWLNAMKNNGCIGCHQLGQLSTRTIP
                     KAFGEFDTGADAWLRRVQSGQSGEQMVNLLAGELGGVPFRYFGDWTDRIAKGELPKTQ
                     PARPQGVERNIVVTTWDWLNDKKYLHDLISSDRRNPMVNGFGPLYGSAEYSTDLVPIL
                     DPKTHKVTSFTAPVRDLDTPEALGPGHAASEKPLQPSAYWGDEKIWDTKANNHNGMID
                     HQGRVWFAAAVRGPGNPDFCKKGSDHPSAKLFPIDLSGRQASMLEPKSMKYHHIDTCF
                     GTHHPQFGYDADNTLWFSGTGQVAGWLNTRVWDETGDAVKAQGWHPFVLDTNGNGKVD
                     EWTEPGKPAEAGKDTRIAGSGPYAVMPHPTDGSVWYTTNVFAGTPGFLRFDPKTNVSE
                     FYAIPKEGIGVRGGDIDKNGVLWGSGSNGHLVSFDRSKCKAPLNGPQATGEHCPEGFA
                     FHKYPGPSFEGFENGTGEASYYTWVDHHNTSGLGENVPISTTNLNDGFVAFKDGQMVR
                     LRVPYPTGFFAKGLDGRIDDAKAGWKGRGLWSTNGDRTPWLMETGKGSKPRAVHIQVR
                     PDPLAH"
BASE COUNT         1431 a         2870 c         2932 g         1620 t
ORIGIN      
        1 gatgaacctt tatgcgaaca acgatttcgt cttcaacaac agctacgtct tctcagaccg
       61 cttcagcgac gaccagaatt atttcaagcc ccgggacgac cttgcgcctg acccggtgcg
      121 cggcctggcc atgcggcgca cgaatatcgt tccggacatc gtcaactgcg agcttcccct
      181 cgacaacagg cgctcgcccg gataccgccg catcgagccg cacatggccg gcaatcgctt
      241 ctacacatgg atcgggcagc atgaaacggg gcgctactcg aaagcccaca agcatgcctc
      301 cgcggccgtg ctcatatgcg tgaagggacg aggctatacg tatacgtggc cgtcggaact
      361 cgggccgacc ccgtggcgcg acgggaaggc ggatcaggtg ttccgcgtcg actacgagcc
      421 ggtcgggatg gtcagcgccg cgcccatgag cggggactgg tttcaccagc atttcgggac
      481 gagcaaggaa gccctgaggc tgaccgcgtg gttcggcccg aacaactccc gctcccgtaa
      541 gccaggtcgc ccgggcgaac aacagaagga cctcggcgcg atcgacatcc gcgacggcgg
      601 ctcggcgatc ccgtatgacg aagaggatcc gcacatccgc caggaatatg aggcgacgct
      661 cgccaaggag ggcgccacgt cgcggatgga ggcctggctt tacgagaagc ccaaggcggg
      721 agagcagcgc cccatgacgg attttgtcgg gctgtagagc atgatccggc gaaagcctgc
      781 ccccggactt gatccggggg tggataccgc ttcgccgcag cagcgtcaga cgcgttctct
      841 gaaatccgcc gcgtcgagct tcgcccgcgg gtaagcgagg gcgctctggg tcatgccgaa
      901 ggccacgcac atttcggcaa agcgaatccc gatcgccttg gtgttgagaa cctgcacgcc
      961 ggttgcgcgg gcgagatcat cggggtcgac cacataggga atgagggcgc cgccgagcgg
     1021 aaggatgatt tccgcacccg tgtcctcgac aagcgagcgg atgagccgct ccgtgatgtc
     1081 gaagatctcg ttcttccgct gcttgatgtc cttgccgtag acgccgatcg gcttgatgcc
     1141 ggacacgaac cggtcgaggc cgttgctgcg caggatgcgc cacgtgtagg gcacgtgcga
     1201 ggcgagcggc acggtgatgc cgacccgatc ggcgaggatc agcgcggcgt gcatcgaggc
     1261 gcggaacagc ccgatgaccg ggatgtcgac cgcaaggcgg ccgccatcga ctccggggtc
     1321 gaaggtgttg ctggaaatga cggcgtcgta gccgttctgg gacgcccaga agatcttctg
     1381 gatgatgctc ggggtctcca tcatgtggtg gaggccgttc agcacgctct gcttgccgat
     1441 cgagtcgtag agcttcgagc caccgaaatc gtccggaaag ccgatctcga ccttcgtgcc
     1501 cggagaggcg tagccgttca gctgagcctc gatctcggcg acgtcgtagg ccggattctt
     1561 cggggactgg ttcaggaaca gaatgcgcat gcttgtcctc gtcagttctt cgattgcacg
     1621 agcgcttgca tcttgtcgac gatctccttc ggcgtgttca tcaggtcgtc gatgatctcg
     1681 ccaagctgct cgcccgtgag cgcgttgatc tcgagcccgc gcttggcggc ctcggccttc
     1741 aactccggat cctgcatggt tgcgtcgaag gcgcgccgca gcgcctcgac ccgatcggcc
     1801 ggcacgccgg gcggcgccag aatcggccgc ccgatctcaa cgctcgaatt gtagagggac
     1861 aagacgcgcc gggcgtcctc gtccttgatg aactcgtaga tggtcggcgc ggtcttgtcg
     1921 ggcagcggcg tgcgttccag attgaagagc accttgacct tgcccgtggc gaaccaatcg
     1981 ggcttgctgc cgcgcaacga cgtgtaggac tggcagatgc cctgaacttc gccgcgatcc
     2041 atggcgagca ggatggcttg gcctccggga tacccgtcga ccagcttgaa cttcatgccg
     2101 agcagccggc tcaggatgac cggcgtgctg ctgacggccg tgccggcgcc ggagccgccg
     2161 acgatcaatt cacgattgta caaatcctcg gctttctgga cgggcgcgcc cgctgccgcc
     2221 acgcacaccc ggttcgtcag ctcggggctg ccgagccagt tgaacttgag cggatcgaag
     2281 cggacgctgg catgcttaag gagcgcctgg ttgggcaggt tgcggccgat catgccgacc
     2341 accgacccgt ccttctcggc aacgttgaag aggtagttcg tcgccgtcag catcccgccg
     2401 cccggcatgt tgaccggcac gaaggtcggc tttcccggaa gatgcttgcc ccaataccgg
     2461 gcgatcaggc ggccccattg gtcgtaatcc ccgcccgcat ccgacgcgat gatgaacctg
     2521 atctgccggc cgcggtaaaa ctcttcgacc gattgggcgc tcgcggcacc tgcaagggct
     2581 gtcagcagca tggccgccag cagcgacacc atcttcctca tgcccgtccc tcccttcggc
     2641 ggcctcggct tggctgcccg gctcttgcgt cgtctgactt gcgttgaaac gtgcttgcac
     2701 gaggccagtc aatgttcgtg ccgcccgggt gtcaaccggc ggccaagtcg aggcggcttc
     2761 ccggctggtc gaggcgcatg atggattcga tcatccgctc ggccgcggcg gcgtccagat
     2821 agcccgcggt caacgtgcga aacttttgca tgaccacgtc cggatcgagc cgggcgcgcg
     2881 agaatcccgg cggaaacaga acctcgacgc ggtgatcctc gcctgtcgcc tcttgcgcct
     2941 cgagcacgca agggtaggtg aggggcgccc gccgtgacag cgtggcgtcg gtggcgaact
     3001 ccagacggct catcatctcc cgcaccgttg gatgcgccca gcgctcgttc tcgaactgcg
     3061 cggggcccaa cgctccgtcg agcagggaca cggtgatcag gaacgcaagg ctgtggtcgg
     3121 ccgcgttgtg cgacgtcgga ttggcgcggt ccgggtccgc ctggtgctcg cggacgttgg
     3181 ggtagtcggc catgacgacg cggatgcgcc ggagacggtc gacatccccg ccgagcacgc
     3241 ggtgcagctc caaggcggcg gcgacggcac cctgcgccgt cgcgacgcac ggataggtct
     3301 tgatctgcgc cttcatgaca tagctgtccg cctgctccgg gcaagccggc ctggcgatgc
     3361 cgtcgaactt gggaaagacc gctttcatgc cgcgcgggtg ctcgaggatg caaagcgggc
     3421 cggtgacacc gtgccgggcg agaagcgcgc agtagacgcc gtgctgcgcc acaagggcat
     3481 tggcgagaga cttggccgcg gagatgtcgc cggcgcgcac caccgcggag gtggccgcgc
     3541 gcgacaggct gagcgcgatc gcatgcgcca gctcccggcg gtccaggccg ataagccggc
     3601 cggccatcag aggcgccgcg acggcggagg cggacactcc gtcccaggcg gaacggcgct
     3661 ccatcatgct cctgaaatga ccgaacacct cgtagccgac aacgatcgcg gccaggatgt
     3721 cgggcccggt ccggcctgcg gattcgcctg ccgccacagc cacggggatg ttgtcgctcg
     3781 ggtgcccgcc gatgctgccg tccggctcca cgacatagtc gttgaggtcg agggcgcgga
     3841 gaagcacccc attggtgaac acggcatcgg gcatggaggc tttccacgtc gtgccgatga
     3901 cggaacattg tggctggccc cggatatccg ccagcatctc gatgaccgca cggccggtgc
     3961 cgatggcgga cgccgggaag cagcagccga gcgtgtcgag caggagaagc ttggcctgcg
     4021 cgagggcctg cgccgaaata tcttcgacgc ggaccgaaag cgcccactgg gcgaggtccc
     4081 gcacgccgct cggcgtgctt tcagtgctcg tgtcgtgcct tgccatgtgt cgccggggtg
     4141 tcagttccgc agggccgcgg cgttcctccc ggcaaggaag ctgaacaccg cattgcgcgt
     4201 ctgccccgtg caggacggat aattatgaaa gaacaggccg accacgtcgc cggacgcgta
     4261 gaggccgtgg atcggcttgt gggacgtgct gatgacctgg gccttggcgt cgacctgcag
     4321 ccctccgaag gtgaaggtga tcccggccgt gatcggatag gcgcggaacg ggccgcgcac
     4381 gatcggctct gcccagttcg acttcggcgg cgagatcccg gtcgtgcact tgccgtcgag
     4441 cttgcgcgga tcgagcggca cgtcaccgcg acatgcggcg ttgaactcgt cgacggtgtg
     4501 cacgaggacg gcaggctcga tcccgatctt tttcgcgagc tccgcgatcg tgtccgcttc
     4561 gaacatcgtg gcttggtagt cgcggccgtg ccggaacagg tcgatcccgg tctggtcgta
     4621 gatctgaaat gcggcgctcc ccggctgcgc gagcacggcc cgcccggtct tggcatacgt
     4681 gtaggaatgc ttcgcctcgc cctcgtcgta gaagcgctgg cccagcgagt tgaccgtgat
     4741 gccgtagggg taatcgtagc ggttcatggt gttgccccgg ccgctttcga gcaacggggt
     4801 ttcgaaaggc ggagcggcgc tgtcgatcgg ggtcatgtgc gcaccctgcc aatggcccgc
     4861 ggacttggcg ccgagctcca gcatcatgtg cagcacttcc ccggtgttgt gcttgctccc
     4921 gcggacccgt acgaggtcgg cattcgggcc gagatagcgc gcccgcatct ccgcattggc
     4981 ctggaacccg ccgctgcagc agatcacgcc tttcgcggac aggtcatatt ccccggacgc
     5041 ggtcgacaca cgcacgcctt cgacatgcca ctgatcgccg tggacggcgc gcacttttga
     5101 ttcatagcgt atttccacgc cgttcttgag cgcgatgtcg cggagttgct tcagcatgcc
     5161 gaggccgccg ccgaccggat ggatgttgat gccgggctcg aaataaagct tgtctccgac
     5221 cttgatcgtc ttctccatct cccagcggat gccgatctcc ttcatccagt ggaccgcggc
     5281 attggaatga ccgacgaagg cccgcgccag gacgggatcg atgcggccct gcgtgacgcg
     5341 gttgagatcc gccaggaaat cgtcctcgga atatgcggga atatgcatgc gccggaaggt
     5401 gtcctcgtcg aggtccggca cgaaaccccg gatttcttcg gcacccgtgt gaacgaaccg
     5461 gaagcccgta tgcgagaagc gcgcatttcc gccgaactcc gcttccggcg ccttttcgag
     5521 catcacgaca cggccggccc ccgccgtctt cgctgctatg gctgactcga aggccgcgct
     5581 tcccccgccg atcatgatga tgtcgcaatt ttctcgttgg ctcatccttc ctcgcccctc
     5641 gtatgcttag gttctctctg ccccgccctg cattcctcga caagctggat cagtccgccc
     5701 ggacaacgcc tatgccgtcg atgaccctga tctgcacgcc gtaaggctcg gacagcctgc
     5761 cgacgcgttc gatgatccgt cgcgccatgt cgcccgtcgc caggacaggc cgcccgcgct
     5821 gcccgcgcgg ctgcccgaag ccctggtcga tcggaacgat ccgtatctcg gcgagcttgc
     5881 cgctttcgaa atggcaggtc gcgaagatgt tttcccagaa gccggcatgc gccacgtgcc
     5941 ccttcctgcc gccatcggtg cgggcgtcga ggaaatcggc gggagtggcg tcgtggccga
     6001 ggccgaaccg ggcgtaggcc tcctccggaa agaacggaac cgtctcgttc tggaggacga
     6061 ggttgccgag cgaatagaaa atcggcttgc ctcggtagag ctcgaggccg agcggcgtgt
     6121 gcgagccgtg cccgacgaag atgtcggcgc ccgcatcgat cgccgcgtgt gcgaagtcag
     6181 ggatgaaatc cgccggctca tggaggtcga tgcgcgtctt cgccgtcgcc atgcttcgct
     6241 gggagaagcc atggctgtgg aagctcacca ccacccagtc ggcctggcgg cgcgcctcgc
     6301 gaatccagcg aagattgtct tcggcgtcgg cttcgttgcc cgcgctggtc agcgtgaatc
     6361 gctccccgcg cacgaattgc tggccgaaga tggacagctc ttcggcgcgg tcagccgggg
     6421 cctcgctgtc gctgtagaag tgggtccggt cacgggcgcg cgtctggtcg aggccgagtt
     6481 cccggctcat ccgcttcagc gcctcgaacg cctccccgtc gacggtgtac gtgctggccg
     6541 agtggaatgg attgatgccg gcccgcccgc gcaggtcggg ccgttgggcg cccgcgcgat
     6601 tccacgggcg gaaggttgcc gtcgtcgcga gcagcgccac ccggccgccc ttggtgtcga
     6661 ggtaggcggg catgcgcgcc tcggcgaggt tgcgcccgct ccccgcatgg gcgatgccgg
     6721 cggcgtccag atgcgaaagc gtcgcgagca cgccgccttc gccatagtcg aaggcgtggt
     6781 tgttcgcgca gctcaccatg ttgatgccga accacttcat gtcgtgaagc agttccggcg
     6841 gcgtcgtcat gaacgtgcct tgcgtgatgc cgggcgttcc ttcgtcccag cgccgcacca
     6901 cgctttcgag gttgacgaag ccggcgtcgc agtcccggaa tttgtcccgc acggccagga
     6961 aggccggctc gtcgaacgtc ttcagggacc tcgtcagcat gcagtcgccg gccacggcga
     7021 tgctgaaatt ccctgctgcg gaggcgtaac tcatgcgcgg atcatgcgcc ttgatgagaa
     7081 gcagagcggg atcgactcaa tctcaatcga tcccgcttga ttgaaacgga tacgctaatg
     7141 cgccagcggg tccggccgca cctggatgtg caccgcgcgc ggtttcgagc ctttgccggt
     7201 ttccatcagc cacggcgtgc ggtcgccgtt cgtgctccac aatccgcgtc ccttccagcc
     7261 cgccttcgcg tcgtcgatac gcccgtcgag ccccttggcg aagaagcccg tcggataggg
     7321 cacgcgcaac cgcaccatct gcccgtcctt gaaggcgacg aatccgtcgt tgaggttggt
     7381 cgtggagatc gggacgttct cgccgaggcc ggacgtgttg tggtgatcga cccacgtgta
     7441 atagctcgcc tcgccggtgc cgttctcgaa tccctcgaaa gaggggccgg gatacttgtg
     7501 gaaggcgaag ccctcggggc agtgctcgcc ggtcgcctgc ggcccgttga gcggcgcttt
     7561 gcacttgctg cggtcgaagc tgacgaggtg gccgttcgag cccgagcccc acagcacgcc
     7621 gttcttgtcg atgtcgccgc cgcgcacccc gatgccttct ttcgggatcg cgtagaactc
     7681 gctgacattg gtcttcggat cgaagcgcag gaatcccggc gtgccggcga acacgttcgt
     7741 cgtgtaccag accgagccgt cggtcggatg cggcatgacc gcataggggc cggagcccgc
     7801 gatgcgcgtg tccttgccgg cttcggccgg cttgcccggc tcggtccact cgtcgacctt
     7861 gccgttgccg ttcgtgtcga gcacgaacgg atgccagccc tgcgccttca cggcgtcgcc
     7921 cgtctcgtcc cacaccctgg tattcagcca gccggcgacc tggcccgtgc ccgagaacca
     7981 cagcgtgttg tcggcgtcgt agccgaattg cgggtggtgc gtgccgaagc aggtgtcgat
     8041 gtggtggtat ttcatcgact tcggctcgag catcgaggcc tggcgtcccg agaggtcgat
     8101 cgggaacagc ttggccgagg gatggtcgga gcccttcttg cagaagtcgg ggttgccggg
     8161 gccacgaacc gccgccgcga accacacgcg gccctggtga tcgatcatgc cgttgtggtt
     8221 gttcgctttc gtgtcccaga tcttctcgtc accccaatac gccgaaggct gcagcggctt
     8281 ctcgctggcg gcatggcccg gcccaagagc ttcgggcgtg tcgaggtccc ggaccggagc
     8341 ggtgaaggat gtcaccttgt gggtcttggg gtcgaggatc gggacgaggt ccgtcgagta
     8401 ttcggccgat ccgtaaagcg ggccgaagcc gttcaccatc gggttccgcc gatcgctcga
     8461 gatcaggtcg tgcaggtatt tcttgtcgtt gagccagtcc catgtggtta cgacgatatt
     8521 gcgttcgacg ccttgcggcc gggccggctg cgtctttggc agctcgcctt tggcgatgcg
     8581 gtccgtccag tcgccgaaat aacggaacgg cacgccaccg agctcgccgg cgagcaggtt
     8641 gaccatctgc tcgcccgact gcccggactg cacgcggcgt agccacgcgt cagcccccgt
     8701 gtcgaactcg ccaaatgcct tcgggatggt ccgggtcgac agctggccca gctggtggca
     8761 gccgatgcag ccgttgttct tcatcgcgtt gagccagcct tgctgggtga tcttggcggg
     8821 gatgtcgctc ttgccgccga actggctcgc ctc
//
LOCUS       DATAIQ010000267         6202 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_52442, whole genome shotgun sequence.
ACCESSION   DATAIQ010000267 DATAIQ010000000
VERSION     DATAIQ010000267.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 6202)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6202)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6202
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_52442"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            3..803
                     /locus_tag="VHN20_04625"
     CDS             3..803
                     /locus_tag="VHN20_04625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA ester lyase"
                     /protein_id="HEX2725086.1"
                     /translation="MPVDAIIIDLEDAVAPEAKEAARAQVAAAVRQGGFGHREVVVRV
                     NAPDTPWGEDDVAAAAQAGAAAVLVPKVSDAETLSALGHRLRRIGAPESLRVWAMVET
                     PLAILHCDEIASVARDGIARLACLVMGTNDIAKETRARQVAGRWPILSYLATAVAAAR
                     AHDIDILDGVYNALGDDAGFRAECEQGRDLGFDGKTLIHPNQVAIANEVFAPSADELA
                     AARTLIAAFDRPENQTKGVIALEGRMVERMHADMARRTVALAEAIARG"
     gene            complement(899..1105)
                     /locus_tag="VHN20_04630"
     CDS             complement(899..1105)
                     /locus_tag="VHN20_04630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012454106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trm112 family protein"
                     /protein_id="HEX2725087.1"
                     /translation="MADETHTAVEATRIDPKLLEILVCPLTKGPLDYDAARQELISRQ
                     AKLAYPIRDGIPIMLPEEARPLTE"
     gene            complement(1120..1788)
                     /locus_tag="VHN20_04635"
     CDS             complement(1120..1788)
                     /locus_tag="VHN20_04635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015931653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LON peptidase substrate-binding
                     domain-containing protein"
                     /protein_id="HEX2725088.1"
                     /translation="MSMNAVYRGPADCPGIIPVFPLSGALLLPRGQMPLNIFEPRYVA
                     MIDAALKGERVIGMIQPDADEDDAVVPKLYRVGCAGRITQFSETGDGRYLITLVGIAR
                     FRVESEITATTPYRQCRVSYDAFAADFLARAGEDEVDRPGVLRALRDFVEANDLKVDW
                     RGIEQAPNEALVNALCMMSPFGAREKQALLEAPDLRTRAEALIALTEIELARDDEGSE
                     PTLQ"
     gene            complement(1884..2780)
                     /gene="trxA"
                     /locus_tag="VHN20_04640"
     CDS             complement(1884..2780)
                     /gene="trxA"
                     /locus_tag="VHN20_04640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HEX2725089.1"
                     /translation="MLAESPLVPDDVIKDTTTANFRQDVIAESARQPVLVDFWAPWCG
                     PCKQLTPVLEKAVKAAGGKVKLVKMNIDEHPQIAGQLGIQSIPAVIAFTKGQPVDGFM
                     GALPEGQVKGFIERLVGPVEGDGADELIKEAEARAAAGDASGAAELYAAVLAQDPENT
                     AAIAALAKLHLDLGDVEGAKRFLDMAPEAKANDPAIAGARAAIELAEQASSLGDLGEL
                     QQRVAANPLDHQARFDLALALNAGGKREEAIDHLVDIVRRDRNWNEDGARKQLLQLFE
                     AWGPMDEMTIVGRRKLSSVLFS"
     gene            complement(2887..3441)
                     /locus_tag="VHN20_04645"
     CDS             complement(2887..3441)
                     /locus_tag="VHN20_04645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018259720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl-tRNA synthetase associated
                     domain-containing protein"
                     /protein_id="HEX2725090.1"
                     /translation="MPAIPPDLFAYFAKLGIETETFEHPPVFTVAESRSIKAAIAGGH
                     SKNLFLKDKKDRIFLVVARDETRIDLKKLHETIGASGRLSFGSPDLLRATLGVEPGSV
                     TPFALINDAERRVAVVLDASLMAFARVNFHPLINSMTTTIGSEDFLAFLRATGHEARV
                     LRLPEPASEASADSARAEPALDLK"
     gene            3631..3705
                     /locus_tag="VHN20_04650"
     tRNA            3631..3705
                     /locus_tag="VHN20_04650"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3663..3665,aa:Gly,seq:gcc)
     gene            complement(3975..5183)
                     /locus_tag="VHN20_04655"
     CDS             complement(3975..5183)
                     /locus_tag="VHN20_04655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007876288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX2725091.1"
                     /translation="MMNFKLYPAALLAFALCPFGAGAQVSDNTVKIGILNDQSGVYAD
                     FGGKWSVEAAQMAVADFGGKALGAPVEIVSADHQNKPDVASNLARHWYDVEHVDAIME
                     LTTSSVALAVQQLSKDKKKINIVTGAATTDLTGKACTPYGFHWAYDNRALAVGTGGAL
                     VEQGGKNWFFITADYAFGHSLETETSRYVSSKGGKVLGAVRHPLSAPDFSSFLLQAQG
                     SKAQVIGLANAGLDTSNSIKQAAEFGIVQGGQRLAALLFTLAEVHGLGLKAAQGLVLT
                     EGYYWDLDDATRAFAKRFMEKTGRMPNMVHAGTYSAVTQYLKAVQAAGTDETDAVTKK
                     LHEMPVDDFFARKGKVLDNGRMVHDMYLFEVKKPGESKGPWDYYKHLSTIPGDVAFAS
                     VQESGCQLTH"
BASE COUNT         1009 a         2045 c         2087 g         1061 t
ORIGIN      
        1 ccctgccggt cgacgcgatc atcatcgatc tcgaggacgc ggtcgcgccg gaggcgaagg
       61 aagcggcgcg ggcgcaggtc gctgccgccg tcaggcaagg cggtttcggt caccgcgagg
      121 tggtggtccg cgtcaacgcc ccggatacgc cgtggggcga agacgacgtt gctgccgccg
      181 cgcaggctgg cgccgccgcc gtcctcgtgc cgaaagtctc ggacgccgag acgctcagcg
      241 cgcttggaca ccggctgcgg cgcatcggcg cgcccgagag cctgcgtgtc tgggcgatgg
      301 tcgagacgcc gctcgcgatc ctgcattgcg acgagattgc cagcgtcgcc cgtgacggca
      361 tcgcgcgcct cgcctgcctc gtcatgggca cgaacgacat cgccaaggaa acgcgcgccc
      421 gccaggtcgc cgggcgatgg ccgatcctgt cctatctcgc gaccgccgtt gcggcggcgc
      481 gcgcgcacga catcgacatc ctcgatggcg tctacaacgc cctcggcgac gacgccggct
      541 tccgggccga atgcgagcag gggcgcgatc tcggcttcga cggcaagacg ctgatccatc
      601 ccaaccaggt ggcgattgcc aacgaggtct ttgccccgag cgccgacgag ctggcggcgg
      661 cgcgcacgct catcgccgca ttcgaccggc cggagaacca gaccaagggc gtcattgcgc
      721 tcgaggggcg catggtcgag cgcatgcacg ccgacatggc gcgccgcacc gtggcgctgg
      781 cggaagcgat tgcgcgcggg tgagcgctct aactccgcgc gcgggagggc acatgcgggc
      841 gctgccctca cccggtcgcg cctgcggctc gacctctccc gcttcgcggg cgaggtgttt
      901 actcggtcag cgggcgcgcc tcctccggca gcatgattgg aatgccgtcg cggatcggat
      961 aggcgagctt cgcctgccgg ctgatcagct cctggcgggc ggcgtcgtag tcgagcggac
     1021 ccttggtcaa cgggcagacc aggatctcga ggagcttggg gtcgatgcgg gtcgcttcga
     1081 cggcggtgtg cgtctcgtct gccattcgca aaacctttct tattgcaggg tcggctcgga
     1141 gccctcgtcg tcgcgggcca gctcgatctc ggtcagggcg atcaatgcct cggcacgggt
     1201 cctcagatcc ggcgcttcga gcagcgcctg cttctcgcgc gcgccgaacg ggctcatcat
     1261 gcagagggcg ttgacgagcg cctcgttcgg cgcctgctcg atgccgcgcc agtcgacctt
     1321 gaggtcgttc gcctcgacga aatcgcgcaa cgcgcgcagc acgccgggac ggtcgacctc
     1381 gtcctcgccg gcgcgcgcca ggaaatcggc ggcgaacgcg tcgtagctca cgcggcactg
     1441 gcgatacggc gtggtggcgg tgatctcgct ctcgacgcgg aagcgcgcga tcccgacgag
     1501 cgtgatcagg tagcggccgt cgccggtctc ggaaaattgc gtgatgcggc cggcgcagcc
     1561 gacgcggtaa agcttgggaa cgacggcgtc gtcctcgtcc gcgtccggct ggatcatgcc
     1621 gatgacgcgc tcacccttga gcgccgcatc gatcatcgcc acgtagcgcg gctcgaagat
     1681 gttgagaggc atctgcccgc gcggcagaag caatgcgccg gagaggggga acacggggat
     1741 gatgccggga caatccgccg gcccccggta aaccgcgttc atgctcatcg cgagctcccc
     1801 gcgaaagtcg gcccttgctc cttgcgagca ggatcgtctc agatcgaacc gatcctgctc
     1861 aagctttcct tatgccgcat gccctacgag aacagcacgg acgagagctt gcgccgtccc
     1921 acgatcgtca tctcgtccat cggcccccag gcctcgaaca gctgcaggag ctgcttgcgc
     1981 gcgccgtcct cgttccagtt gcggtcgcgc cgcacgatgt cgacgagatg gtcgatcgcc
     2041 tcttcgcgct tgccgccggc gttcagcgcc agggcgaggt cgaagcgcgc ctgatgatcg
     2101 agcgggttgg cggcgacacg ctgctgcagc tcgccgagat cgccgagcga ggatgcctgc
     2161 tcggccagct cgatggcggc gcgcgcgccg gcgatggcgg ggtcgttggc cttcgcctcg
     2221 ggcgccatgt cgaggaagcg tttggcgccc tcgacgtcgc cgaggtcgag atgcagcttg
     2281 gcgagcgccg cgatggctgc cgtgttctcc ggatcctgcg ccagcacggc cgcgtagagc
     2341 tccgcggcgc cgctcgcgtc accggccgcc gcccgcgcct cggcctcctt gatgagctcg
     2401 tcggccccgt ccccctcgac cggcccgacg aggcgctcga tgaagccctt gacctgcccc
     2461 tccggcaggg cgcccatgaa gccgtccaca ggctggccct tggtgaaggc gatcaccgcc
     2521 ggaatcgact ggatgccgag ctgaccggcg atctgcggat gctcgtcgat gttcatcttg
     2581 acgagcttga ccttgccgcc ggcggccttg accgccttct cgagcaccgg cgtgagctgc
     2641 ttgcacgggc cgcaccacgg cgcccagaag tcgaccagca cgggctggcg tgccgattcc
     2701 gcgatcacgt cctggcggaa gttggccgtc gtcgtgtcct tgatcacgtc gtctggcaca
     2761 agcgggcttt cggcgagcat ggcaacctca actgtactgg gggcaggctc aagatgggag
     2821 cactgccgag ctctggctag agcattttcc ggcgaagtgg accccggttc gccgaagaaa
     2881 tgcgtcttat ttcaagtcta gcgccggttc cgcgcgagcg gaatcggcgc tcgcctcgga
     2941 cgccggctca ggcaagcgca ggacacgcgc ctcgtggccg gtggcacgca ggaaggccaa
     3001 aaaatcctcc gatccgatgg tggtcgtcat ggaattgatc agcggatgga agttgacgcg
     3061 cgcaaacgcc atcaggctgg cgtcgagcac cacggcgacg cgcctctccg cgtcgttgat
     3121 cagggcaaag ggcgtcaccg agcccggctc gacgccgagc gtcgcgcgca acaggtcggg
     3181 cgagccgaag gacaggcggc ccgaggcgcc gatcgtctcg tgcagcttct tgagatcgat
     3241 gcgggtctcg tcgcgggcca ccaccaggaa gatgcggtcc ttcttgtcct tgaggaacag
     3301 gttcttcgaa tggccgcccg caatcgccgc cttgatggaa cgcgattcgg cgaccgtgaa
     3361 gacgggcggg tgctcgaacg tctcggtctc gatgccgagc ttcgcaaaat aggcaaagag
     3421 gtcgggcggg atggcgggca tcggtccggg agggctggga ggcgcccgtt ctagccgcac
     3481 ggcggcggcg actcaaggca agcgcgccgg cgtgccacac gcgcagccct gttcctcgtc
     3541 gcgcgacacg agagtgtcgc gccctcttgc aatgtcgccg ccgttgaggc acatgaagcg
     3601 cctcgccagg cgcggcaagc gccacggagc gcgggtgtag ctcaggggta gagcacaacc
     3661 ttgccaaggt tggggtcgag ggttcgaatc ccttcgcccg ctccaaatct cacgggtcga
     3721 ttccggtcac atgggtgacg gattattccg gagacatggg taacactttc gggcctgccg
     3781 catcggctaa cgccgtgagc ctgcatctcg tcgtcaaata tcccagagcg cacggcccga
     3841 agctgcgccg ggcagagcat ggtcatcaag ctggccgacg caggcggcag aggtccgcgc
     3901 acgagacgcg cgcggcacac tgcagtgaaa ggctgatccc ccggcaaggg gatcagctag
     3961 gcggccacca gtcgtcagtg ggtcagctgg cagccgctct cctggacgga cgcgaaggcg
     4021 acgtccccgg ggatcgtgct gaggtgcttg taatagtccc aggggccttt cgactcgccc
     4081 ggcttcttca cctcgaacag atacatgtcg tgcaccatgc ggccgttgtc gagaaccttg
     4141 cctttgcggg cgaagaagtc gtccacgggc atctcgtgca gcttcttggt gacggcgtct
     4201 gtctcgtcgg tgccggcggc ctgcaccgcc ttgaggtatt gcgtgacggc cgaataggtg
     4261 ccggcatgga ccatgttggg catgcggccg gtcttctcca tgaagcgctt ggcgaaggcg
     4321 cgggtcgcgt cgtcgaggtc ccagtaatac ccttccgtca ggacgaggcc ctgggccgcc
     4381 ttgagcccga ggccgtgcac ctcggccaag gtgaagagca gcgcagcgag acgctgcccg
     4441 ccctggacga tgccgaactc ggccgcctgc ttgatcgagt tcgacgtgtc gaggccggca
     4501 ttggcgaggc cgatgacctg ggccttcgac ccttgcgcct gcaggaggaa ggacgagaag
     4561 tccggggcgc tcaacggatg ccgcacggcg ccgagcacct tgccgccctt cgagctcacg
     4621 tatcgggagg tctccgtctc gagggagtgg ccgaaggcgt agtcggccgt gatgaagaac
     4681 cagttctttc cgccctgctc gacgagggcg ccgccggtgc cgaccgcgag cgctcggttg
     4741 tcgtaggccc agtggaagcc gtacggcgtg cacgccttgc cggtgaggtc cgtcgtcgcc
     4801 gcgccggtga caatgttgat cttcttcttg tccttcgaca gctgctgcac ggccagcgcc
     4861 acggacgacg tcgtcagctc catgatggcg tcgacgtgct cgacgtcata ccagtgacgc
     4921 gccaggttgg aggccacgtc cggcttgttc tgatggtcgg cgctgacgat ctcgaccggc
     4981 gcgccgagcg ccttgccgcc gaaatcggcg accgccatct gggcggcctc gacggaccac
     5041 ttgccgccaa aatccgcgta gacgcccgac tggtcgttca ggatgccgat cttgaccgtg
     5101 ttgtccgaga cctgcgcgcc ggcgccgaag gggcagagcg caaaggcgag cagagccgcg
     5161 ggatacagct tgaaattcat catttcctcc gggtcggcgg tatttgcttg tttgccgagg
     5221 cgcgacttca ccggccatcg cccagccttg tcaagccgcg gagcctgtca cgagcctcgg
     5281 ccctgccggc acggcattct cgcgcgcggc tccctaaagg atgacggtgg cgatcacggc
     5341 ggcgagcagg atcgtgccgc cgaccgcgat caggaacgtc ccttccgaga agcccccaaa
     5401 atgcctttgc aaacgatccg ctgaacgccc cgcagaagcc cgcttcatta tttcgtcact
     5461 ttgaactcgc cggccgcatc ccgtgagcca acccaacgcc aagcgtggca gctggttccg
     5521 tccgctggcg ttccaggcgt gttgcgaggg accggtcgtc gtggggacgc gggtcgcgac
     5581 ataaagcggg ccgtggtccc atgtcttccc ggcgctcgct acacccagtg atataccggc
     5641 taatctgagg aaatactgcg tggccgttag ggccaagctt gctggcgcag ccccgagcct
     5701 cccttgactt caggcggcac caagcttggc gaatgattcg cgacgtgccg cggatgtccg
     5761 gccgcctctg ccaaggtatt gcgcgcaaac ggtgcttccc tggtcgacgc atttcggcag
     5821 ccgtgcgaca tctgtccgac gattgtgccg agtgcgccgt tttgccgcgc gaagggcggc
     5881 tatgatcgaa agccgcggcg accgctgcaa tcgcttgaaa aatagagaaa atggcgcacg
     5941 cctcgggacc gttaactaac tccgaaatcg ccaagcttgt tcaggaacat agatactcga
     6001 ctcttttggg cgcagccgct acatgaccgt taacaaattg taaaaaaagt gggtctgagg
     6061 ggcaggtttt cgagcgtatt gaagcaaaag cgcacgcttt ggcttgccgg cacgtcccgt
     6121 gccccgcgcc gccagggcag tcagcctagg cgttccgaac ccttccatct cgttttgacg
     6181 aggccgtcac aagcgatggc ct
//
LOCUS       DATAIQ010000268         7645 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_14026, whole genome shotgun sequence.
ACCESSION   DATAIQ010000268 DATAIQ010000000
VERSION     DATAIQ010000268.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 7645)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7645)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7645
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_14026"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(196..594)
                     /locus_tag="VHN20_04660"
     CDS             complement(196..594)
                     /locus_tag="VHN20_04660"
                     /inference="COORDINATES: protein motif:HMM:NF024834.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEX2725092.1"
                     /translation="MLHQPPYRATSKGRLVPLSSAAFLAASLVASAQAPAPAEPRDPP
                     PPLPATVLKDAKVISVGEALWNQQCTHCHGAKAYPGKAPKLEPHRYKPEFVWDRVHNG
                     FRNMPPWKDVYTPEEEIAIVAYVLSDEFWP"
     gene            complement(685..1974)
                     /locus_tag="VHN20_04665"
     CDS             complement(685..1974)
                     /locus_tag="VHN20_04665"
                     /inference="COORDINATES: protein motif:HMM:NF019607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HEX2725093.1"
                     /translation="MRLALNALASTMAVALSLAAPANAEVKVKLEEVVGGLTHPLAMV
                     SIPDGSGRKAVIEQHGLVRIIDQRGRLLPEPFLNIQAKLVHLEPFFEEQGLLGIAFHP
                     DYKSNGKFYIAYSAPLRGDAILDKKLWWAHTNTVSEMTVSKESPNRANANSEKIISQI
                     DWPQFNHNGHWIAFGPDGKLYVSTGDGGYANDWGIGHNVTTGNGQDLTTPLGKMLRLD
                     VDKEDLIPADNPYVGRNDANPQIWAHGLRNPWRCSFDMRGERELYCGDVQQNSFEEVS
                     IVTKGANLGWRKMEADKCFDYVNPNVHPASCDKTGLVEPIMVYKNCTAIPQDCLGISV
                     TGGYVYRGAHKPWDGKYIFGDWSKSFKEMDGQIFFGTKGSDGKWTLEKASVQGMNPLP
                     YILAFGQDEAGEVYALTSISTGPVGGHDKIYRIVPTD"
     gene            2208..2858
                     /locus_tag="VHN20_04670"
     CDS             2208..2858
                     /locus_tag="VHN20_04670"
                     /inference="COORDINATES: protein motif:HMM:NF018038.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ThuA domain-containing protein"
                     /protein_id="HEX2725094.1"
                     /translation="MLVFTKTAGYRHDSIPAAVAALRAIAARHGIAVEATEDEAVFRP
                     EKLSAFKAVAFVNTTGDILDGEQRRAFESFIAAGGGYVGIHSAADTAYDWPWYGRLVG
                     AWFKSHPPDLQTGTVRFTRLPGADLPAAWQVTDEFYNFRSGPAPEATIVATMDESTYE
                     GGDMAGDHPIAWCRKIDQGRSWYTGLGHTTELFGNAVFLAHLTKGVLYAMSRSEAC"
     gene            complement(2942..3214)
                     /locus_tag="VHN20_04675"
     CDS             complement(2942..3214)
                     /locus_tag="VHN20_04675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725095.1"
                     /translation="MNSAWTVLAVLKNARELLASGQSNEIISAIASLREHADGRVRDL
                     AYFALLDTRLINGGEASIALLAEPDSRSEALELFDDTIRRITSALH"
     gene            3486..4598
                     /locus_tag="VHN20_04680"
     CDS             3486..4598
                     /locus_tag="VHN20_04680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:flavin oxidoreductase/NADH oxidase"
                     /protein_id="HEX2725096.1"
                     /translation="MSGAKLFTPFRFGTLELANRIVIAPMCQYSAMDGCMTDWHLIHL
                     GHLALSGAGLLTIEATAVVPEGRITYADVGLYSDECEVAMRRVLESVRRWSDMPIAIQ
                     LAHAGRKASTEVPWKGGTQITSSPHGWQTVAPSAVPFQTADRSPVALDRQGLEKVLDG
                     FVDAARRAARLGIGAVQLHAAHGYLLHQFLSPLSNRRDDEFGGSLENRMRFPLQVFEA
                     VRTAFPHDLPVTMRVSGTDWAEGGWTIEETIEFARALEARGCSGIHVSSGGLVPTAKI
                     PVGPSYQVPLARAVKASVRMPVIAVGLITGFEQAEAILVTGDADLVALARAILYDPRW
                     PWHAAAHFGAQIRGPNQYLRSQPRGFPDLFSLRADD"
     gene            5011..5577
                     /locus_tag="VHN20_04685"
     CDS             5011..5577
                     /locus_tag="VHN20_04685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012453126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HdeD family acid-resistance protein"
                     /protein_id="HEX2725097.1"
                     /translation="MCAQLAQNWWAVALRGVFGILFGLVALVLPGATILSLVLFFSAY
                     MLVDGIFGIIAAVRAARGGERWGMLVFEGILNIAVGVIAFVMPGLTVVAFVLLLAAWS
                     LVSGGLMLGAAFRLSQHHGRWWMALAGIASIIFGILLAIAPIIGAVVLTWWIGAYALL
                     FGVVLLVLAFRLRAMNDAGRRTAAPRAA"
     gene            5690..7015
                     /locus_tag="VHN20_04690"
     CDS             5690..7015
                     /locus_tag="VHN20_04690"
                     /EC_number="1.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019199468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEX2725098.1"
                     /translation="MDTPALVRQAHPVPSPGVAPATGRAPGAGGHRVVIVGGGFGGLS
                     TARALAGVPGIAVTLIDRRNHHLFQPLLYQVATAVLAPGEIAQPLRGLLGRYPNVEVL
                     LAEVDAVDAAAKTIRVTDGARLPYDTLVIATGATHSYFGHPEWERFAPGLKSLEDARR
                     IRKQVLLAFEQAERSIDAAERECLTSFAVIGGGPTGVEMAGAIAGLARQAIAGQFHNI
                     DPTKARVLLIEAAPRILGTFPEDLSDYAEQALKRLGVEVMTGRPVEDITDRGVVVDGA
                     LLRAATIVWAAGVRSSPVADWLGVEPVDRAGHVRVAADLSVPGLRDVYVLGDASLLDG
                     SDGKPLPGLAQVAHQQGVYLGRALRARILHGTVPKPFRFHSRGNLAIIGRNAGVVQWG
                     TVKLRGFLAWLVWGIAHVYLLNGFQNRLIVSLRWLWGYLTFQRGARIIT"
     gene            7394..>7645
                     /locus_tag="VHN20_04695"
     CDS             7394..>7645
                     /locus_tag="VHN20_04695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725099.1"
                     /translation="MRTLVAITAALLLVFSSVGESNVSRAQSSLNPGFAEQDAHYQPS
                     ARAGREIWFFATASNDRFFTYSYPQRIGAAIDWHKVLAAK"
BASE COUNT         1218 a         2539 c         2472 g         1416 t
ORIGIN      
        1 ggctatttca gcgccaccaa gaacctcagc acgatcgatg cgcgctattt ctcgcgcaac
       61 acgacaaagg tctcgagcta ctgcaacaag gccagaggcg agacgctgat gagtgcgatc
      121 cagcgcaact ggcgttaggg atcagtaatc agtagcgagt gatcagagct accgatcact
      181 gataaccgat cgctgtcacg gccagaactc gtcgctcagc acgtaggcga cgatcgcgat
      241 ctcctcctcg ggcgtgtaga cgtccttcca cggcggcatg ttgcggaagc cgttgtggac
      301 gcggtcccag acgaattccg gcttgtagcg gtgcggctcg agcttcggcg cctttcccgg
      361 ataagccttg gcgccgtgac aatgcgtgca ctgctggttc cagagcgcct ccccgaccga
      421 gatcaccttc gcatctttga gaacggtcgc gggcagcggc ggcggcggat cacgcggctc
      481 cgccggtgcc ggcgcctgtg ccgacgccac gagcgaggcg gcgaggaatg cggccgacga
      541 cagcgggaca aggcggccct tggacgttgc gcgatacgga ggttggtgga gcatcaagtc
      601 gacccctgtc gaaaacgagc ggtgctaaaa aatttcgcgg tgggcgggat ccggccggga
      661 atgccggccg gatccgaacc tcgatcaatc ggtcggcacg atgcggtaga tcttgtcgtg
      721 cccgccgacc ggccccgtcg agatgctggt cagcgcgtag acctcgccgg cctcgtcctg
      781 gccgaatgcc aggatatagg gcaaggggtt catgccctgg accgatgcct tttccagggt
      841 ccatttgccg tccgagccct tggtgccgaa gaagatctgc ccgtccatct ccttgaacga
      901 cttcgaccag tcgccgaaga tgtatttgcc gtcccacggc ttgtgggcgc cgcggtagac
      961 gtagccgccc gtcaccgaga tgccgaggca gtcctgcggg atcgccgtgc agttcttgta
     1021 gaccatgatc ggctcgacca agccggtctt gtcgcacgag gccgggtgca cattcgggtt
     1081 gacgtaatcg aagcacttgt cggcttccat cttgcgccaa ccgagattgg cccccttggt
     1141 gacgatgctg acctcctcga acgagttctg ctggacgtcg ccgcaataca gctcgcgctc
     1201 gccgcgcatg tcgaacgagc agcgccacgg attgcgcaag ccgtgcgccc agatctgcgg
     1261 gttggcgtcg ttgcgcccga catacgggtt gtcggcaggg atcaggtcct ccttgtcgac
     1321 gtcgagacgc agcatcttgc cgagcggcgt cgtcagatcc tggccgttgc cggtcgtgac
     1381 gttatggccg atgccccagt cgttggcata gccgccgtca ccggtcgata cgtaaagctt
     1441 tccgtcagga ccaaacgcaa tccagtgtcc gttatggttg aattgcggcc agtcgatctg
     1501 ggaaattatc ttctcggaat tggcattggc tctgttcggg ctctctttcg agacagtcat
     1561 ctccgacact gtattggtgt gggcccacca cagcttcttg tcgaggatcg cgtcgccgcg
     1621 cagaggcgcc gagtaagcga tgtagaactt gccgttgctc ttgtaatccg gatggaaggc
     1681 gatgccgaga aggccctgct cctcgaagaa cggctcgaga tggacgagct tcgcctggat
     1741 gttcaggaac ggctcgggca gaagtcggcc gcgctgatcg atgatgcgca ccaggccatg
     1801 ctgctcgatc acggccttgc ggccgctccc gtccgggatc gacaccatcg cgagcggatg
     1861 ggtcagcccg cccaccacct cttccagctt gactttcacc tcggcgttgg ccggtgcggc
     1921 gagcgacagc gccacggcca tcgtagaagc aagggcattc agcgcaagac gcatgtcatc
     1981 ctccctgtct tcattgcctg acgatcacga aacgatctaa aatcaggtcc tcaatttgat
     2041 acgtccgccg caaatttctg tccagcaaag cttctgcaag tttttgtgtc ggcaatcgcg
     2101 tcagccgcca gtcgccgggg accagaatgt gcaggctgat aggaattctc ctactcgctc
     2161 tgaccgcagt cctgaacacg catcctgctg ctgcgaacgg cgacgccatg cttgtgttca
     2221 cgaaaaccgc cggctaccgc cacgactcga tcccggcagc ggtggcggcg ctccgcgcca
     2281 tcgccgcacg ccacggcatc gccgtcgaag caaccgagga cgaggccgtg ttccgaccgg
     2341 agaagctctc agccttcaaa gcggtcgcct tcgtcaacac aacgggcgac atcctcgacg
     2401 gcgaacagcg gcgcgccttc gagtccttca tcgccgcggg cggcggctat gtcggaatcc
     2461 attccgcggc cgacaccgcg tatgactggc cgtggtacgg gcgcctggtc ggcgcgtggt
     2521 tcaagagcca cccgcccgac ttgcagacgg ggaccgtccg tttcacccgc ctgcccggcg
     2581 ccgacctgcc ggcggcatgg caggtcaccg acgagttcta caatttccgc agcggccccg
     2641 cgcccgaggc gacgatcgtg gccaccatgg acgagagcac ctacgagggc ggagacatgg
     2701 ccggcgatca cccaatcgcg tggtgccgga aaatcgacca aggccgctcc tggtataccg
     2761 gcctcgggca taccaccgag ctgttcggca acgcggtctt tctcgcgcat ctgacgaagg
     2821 gcgtgcttta cgcgatgtcc cgatccgagg cgtgctgacg cgacacgagg tcagcggtcg
     2881 aagcgtgttg ctacgcgtcg tcctgcggga attcacgatg acgtgatccg atggtgctgc
     2941 ctcaatgcag cgccgaggtg attcgcctga tcgtgtcgtc gaacagctcg agcgcctcgc
     3001 ttcggctgtc aggttcggcg agcaacgcga tcgaggcttc cccgccgttt atcaggcgcg
     3061 tgtccagcag tgcaaaatag gcgagatcgc gcacccggcc gtcggcgtgc tcccgcagcg
     3121 atgcgatcgc tgaaatgatt tcgttgctct ggccgctggc caggagctcg cgtgcgttct
     3181 tcagcaccgc gagcacggtc catgccgaat tcataccttg cccctctcgc agccgggttg
     3241 acccagctga tgcctggccc gtcacacggg cctttcggtc ttctgcaaga ccttcggaaa
     3301 cacacctacc tgagtcgcac cggcaaatgt gaggcgtcgt tgtcacggct ggctccagtc
     3361 ggctccacat ggttgccacc gtcccggccc gggctacgca gtgcgccgta gcttttccgc
     3421 gcatggcgcg ttctaggcat agactgctca cgagtttgag gccggccaag gtgccgtaag
     3481 ctgccatgtc aggtgcaaag ctcttcacgc ccttccgctt cggaacgctc gagcttgcga
     3541 accggatcgt gatcgcgccc atgtgccagt attcggccat ggacgggtgc atgaccgatt
     3601 ggcacctcat ccatctcggt catcttgccc tgtcgggcgc cgggttgctg acgatcgagg
     3661 cgacggcggt cgttcccgag gggcgcatca cctatgccga tgtcggcctt tattcggacg
     3721 agtgcgaggt ggcgatgcgg cgcgtgctcg agagcgtccg ccgctggtca gatatgccga
     3781 tcgcgattca gctcgcgcat gccggccgga aggcatcgac ggaggtgccc tggaagggtg
     3841 gtacgcagat cacatcgagt ccgcacggct ggcagaccgt cgcgccgtcg gcggttccat
     3901 tccagacggc cgacaggtcc ccggtcgcgc tggaccgcca aggtctcgag aaggtcctgg
     3961 acgggtttgt cgacgcggcg aggcgcgcgg cgcgactggg catcggcgcc gtgcagcttc
     4021 atgccgcgca cggctacctg ctgcaccagt tcctctcgcc gctgtcgaac cggcgcgacg
     4081 acgagttcgg gggatcgctc gagaacagga tgcgctttcc gctccaggta ttcgaagccg
     4141 tgcgcaccgc tttcccacac gatctcccgg ttacgatgcg ggtctccggc accgattggg
     4201 ccgagggcgg ctggacgatc gaggagacca tcgaattcgc acgggcgctc gaagcgcggg
     4261 gatgcagcgg catccatgtg tcgagcggcg gcctcgttcc gacggcaaag attcccgtcg
     4321 ggccgagcta ccaggtgccg ctcgcccgcg ccgtgaaggc gtccgtcagg atgccggtga
     4381 tcgccgtcgg actgatcacc gggttcgagc aggcggaagc gatcctggtc actggcgacg
     4441 ccgatctcgt cgcgctcgcc cgggccatcc tctacgatcc gcgctggccc tggcacgcgg
     4501 ccgcgcattt cggcgcccag atccggggcc cgaaccagta tctgcgctcg cagccgcgcg
     4561 gtttccccga cctgttcagc ctgcgcgcgg acgactgatg gctgcaagct tcgatgcggt
     4621 gacggtccgt ccagccaacg cacgggggcg gcccgtgctt gcccttccgg gcgtccccct
     4681 tgcatccgga cttggccatg caagcgtctc tcggcctgtc ataggatggc ggacttgcgt
     4741 ccgcagcgat cacgggtttg acttgcaacg acgcgttctc gcgggcccgc agatcgagcg
     4801 cgccgccgtt acggcggaat gcagcgggcc gcgtggaagg ctccgacctg tcaaaggcgg
     4861 caagacctgc tttggagcgc gtctcgcggc aagcatagaa ggagcccctc catgaatggc
     4921 cacgacgcaa ccaatcccgg cccgccacgc acctcgccgg ctgcaacagg caccacggcg
     4981 gctacgggcg acgccacccg cgccgacgcg atgtgcgcgc agctggcgca gaactggtgg
     5041 gcggtcgccc tgcgcggcgt cttcggcatc ctgttcggcc tcgtcgcgct ggtccttccc
     5101 ggagcgacga tcctgtcgtt ggtgctgttc ttctcggcct acatgctggt cgacggcatc
     5161 ttcgggatca tcgcggcggt gcgcgccgcg cgcggcggcg agcgctgggg catgctcgtg
     5221 ttcgaaggca tcctcaacat cgccgtcggc gtgatcgcat tcgttatgcc cgggctcacg
     5281 gtggtcgcct tcgtgctgct gctggcggca tggtccctgg tatcgggcgg gctcatgctc
     5341 ggcgcggcgt tccggctgag ccagcatcac gggcgctggt ggatggcgct cgccggcatc
     5401 gcctcgatca ttttcggcat tctgctggcg atcgcgccga tcatcggcgc cgtggtcctg
     5461 acatggtgga tcggcgcgta cgcgcttctc ttcggcgtgg tgcttctcgt gctcgcgttc
     5521 cgacttcgcg ccatgaacga tgcaggtcgg cggaccgccg caccccgcgc ggcgtaggcc
     5581 ggttggcgcg tccctgggaa cgcgctcgcc aagtcgttca gcgtcgactt atgcaggagc
     5641 tgcgcagccc acgatgaacg atgccgcagc tcacgatggc gagacgccca tggacacacc
     5701 tgccctggtc cggcaagcac acccggtgcc ttcccccggc gtcgcgccag cgacgggccg
     5761 agcgccaggc gccggcggcc atcgcgtcgt gatcgtgggc ggcggcttcg gcgggctcag
     5821 caccgcacgg gcgctggcgg gcgtgcccgg catcgcggtc acgttgatcg accggcgcaa
     5881 ccaccacctg ttccagccgc ttctgtacca ggtcgcaacc gcggtcctgg cgccgggcga
     5941 gatcgcccag cctttgcgcg gcttgctcgg tcgttatccc aacgttgagg tgctgctcgc
     6001 cgaggtcgac gcggtcgatg cggcggccaa gaccattcgg gtgaccgacg gcgccaggct
     6061 gccctacgac accctcgtga tcgccacggg cgccacccat tcctatttcg ggcatccgga
     6121 atgggagcgc tttgccccag gcctcaaatc gcttgaggac gcacgccgca tccgcaagca
     6181 ggtgctgctc gcattcgaac aggctgagcg ctccatagac gccgccgaac gcgagtgcct
     6241 gaccagcttc gccgtaatcg gcggcggtcc gaccggcgtg gagatggcag gcgccatcgc
     6301 cggcctcgcc cgccaggcaa tcgccggtca gttccacaac atcgacccga ccaaggcgcg
     6361 cgttctcctg atcgaggccg cgccgcgcat cctcggcact tttcccgaag acctctcgga
     6421 ctatgcggag caggccctga agcgcctcgg cgtcgaggtg atgaccggcc ggccggtgga
     6481 ggacatcacg gaccgcggcg tcgtcgtcga cggtgcgctg ctgcgcgccg ccacgatcgt
     6541 ctgggcggca ggcgtgcgct cctcaccggt cgcggactgg ctgggcgtcg agccggttga
     6601 ccgggccggg cacgtgcgcg tcgcggccga cctgtccgtg ccgggtctgc gggacgtata
     6661 cgttctgggt gacgcgtcgt tgctcgatgg gtcggacggc aagccgctgc ccggcctggc
     6721 gcaagtggcg caccagcagg gcgtttatct cggccgcgct ttgcgcgccc gcatcctgca
     6781 cgggacggtg ccgaagccgt tccgcttcca ctcgcgcggc aacctggcga tcatcggccg
     6841 caatgccggc gtcgtgcagt ggggcacggt caagctccgc ggcttcctgg cctggctggt
     6901 gtggggcatc gcccacgtct accttctgaa cggctttcag aaccgactga tcgtcagcct
     6961 gcgctggctg tggggctacc tgaccttcca gcgcggcgcg cggatcatca cgtgaccagt
     7021 gcgcgacgga gcacctcggc ttgcggggtg tgttttcgcc aacccctgcc ggcggccgcg
     7081 tcttcagctt taatgggttc acgttttttt gaccggccct gccctcgtgg tcactatggc
     7141 ccgcggcctc ggcaaacgat gttggcaggc caagagtgcg cgccgagcga ggccaggcag
     7201 ggcgtcggcc cccctcccgc tgcaaattat cgtcgtgaat tcaggaccac tcagaggcca
     7261 agccggaagg tggcggcggc gcctgcatcg catctcctgg ttgattcaaa tccaattctg
     7321 acggaacatc cgtcttgggg ggtgcctgcg cgccggagtg ctttggcgct ttttcataat
     7381 cgaggagttt tccatgagaa ccctcgttgc aattaccgcg gctctgctgc tggtcttttc
     7441 gagcgtcggc gaaagcaatg tcagccgcgc gcaaagctcc ctcaatcccg gtttcgccga
     7501 gcaggacgcg cattaccagc caagtgcgcg cgccgggcgc gagatctggt tcttcgccac
     7561 cgcctcgaac gaccgcttct tcacctattc ctatccgcag cgcatcggcg ccgccatcga
     7621 ctggcacaag gtgctggcgg caaag
//
LOCUS       DATAIQ010000269         3188 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_329292, whole genome shotgun sequence.
ACCESSION   DATAIQ010000269 DATAIQ010000000
VERSION     DATAIQ010000269.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3188)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3188)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3188
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_329292"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..421)
                     /locus_tag="VHN20_04700"
     CDS             complement(<1..421)
                     /locus_tag="VHN20_04700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010683375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone biosynthesis protein UbiB"
                     /protein_id="HEX2725100.1"
                     /translation="MIGDIVHLARNLRAGFVLAREGALALVDPNVLPPSARLMLRLAR
                     LVERPGAGTGAARLSAALTRLGPSYVKFGQFLATRPDIVGIVAARDLESLQDRMPPFP
                     RAEAARMVEIALGRPIETLFSEFSEPHQATPRRLRGRS"
     gene            complement(423..1181)
                     /gene="ubiE"
                     /locus_tag="VHN20_04705"
     CDS             complement(423..1181)
                     /gene="ubiE"
                     /locus_tag="VHN20_04705"
                     /EC_number="2.1.1.163"
                     /EC_number="2.1.1.201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional demethylmenaquinone
                     methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol
                     methylase UbiE"
                     /protein_id="HEX2725101.1"
                     /translation="MIRSRDETTHFGFEAVPLGDKQERVNDVFHSVARRYDLMNDLMS
                     AGLHRAWKDALVTALRPPKRRAFRHLDVAGGTGDVAFRVLDAGGPLTEVTVLDINGEM
                     LAVGRERAGTRYAGRVDFVEANAETLPLADKSFDGYSIAFGIRNVPRLETALAEAYRV
                     LRRGGHFLCLEFSHVDVPGLDTLYDAYSFNVIPAMGRVVAGDADSYRYLVESIRRFPS
                     RAAFARMIEAAGFRRVTCRSMSGGIVAIHSGWKI"
     gene            1262..2152
                     /gene="mutM"
                     /locus_tag="VHN20_04710"
     CDS             1262..2152
                     /gene="mutM"
                     /locus_tag="VHN20_04710"
                     /EC_number="3.2.2.23"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015933357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0008534 - oxidized purine nucleobase
                     lesion DNA N-glycosylase activity [Evidence IEA];
                     GO_function: GO:0016799 - hydrolase activity, hydrolyzing
                     N-glycosyl compounds [Evidence IEA];
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA-formamidopyrimidine
                     glycosylase/DNA-(apurinic or apyrimidinic site) lyase"
                     /protein_id="HEX2725102.1"
                     /translation="MPELPEVETVRRGLEPAMVGARIVAVEQRRPDLRFPFPARFADR
                     LEGQTVTALGRRAKYLLADLSSGEVLVMHLGMTGRFLVNQDGITFAPGEFHDEAGGGR
                     THDHVVFRLSNGATVTYNDARRFGFMDLAARAGLAESRHFRTMGIEPLGNELSGEAIA
                     RLFHDRKAPLKAALMDQRLIAGLGNIYVCEALFRSGLNPQAPAGSIATPGGRPREKAH
                     RLAEAIRDVLTEAVEAGGSTLRDYAQTDGSLGYFQQSFRVYDREGEACVTPGCGGAVK
                     RLVQGGRSTFFCPRCQGRRR"
     gene            2200..2352
                     /locus_tag="VHN20_04715"
     CDS             2200..2352
                     /locus_tag="VHN20_04715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725103.1"
                     /translation="MLVKAFLHYFSPTAFYNDEPWRHILLKAAALLLLYAGAALIAWL
                     WWPQPR"
     gene            2437..>3188
                     /locus_tag="VHN20_04720"
     CDS             2437..>3188
                     /locus_tag="VHN20_04720"
                     /EC_number="4.2.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019964247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase"
                     /protein_id="HEX2725104.1"
                     /translation="MAFETILVETRGKVGLVTLNRPQALNALNATLVDELNAALDALE
                     ANRDIACVVITGSDKAFAAGADIKEMQDLSYPQTYLDDFVATWDRVANRRKPLIAAVA
                     GFALGGGCELAMMCDIIIAADTARFGQPEIKVGVLPGSGGTQRLTRVVGKAKAMEMCL
                     TGRLMDAAEAERSGLVARVVPAADLMNEALKTAEAIAAMSLPAVMMVKECVNRAYETT
                     LSEGIRFERRVFHAMFATADQKEGMAAFVEKRA"
BASE COUNT          511 a         1089 c         1079 g          509 t
ORIGIN      
        1 cggatcgtcc gcgcaaccgc cgcggcgtcg cctggtgtgg ttcgctgaac tccgagaaca
       61 gggtctcgat cggccgtcca agcgcgatct cgaccatgcg cgccgcttcg gcacgcggga
      121 acggcggcat gcggtcctgc aggctttcca ggtcgcgtgc cgcaacgatg ccgacgatgt
      181 ccggccgcgt cgcgaggaac tgcccgaact tgacgtagga cggcccgagc cgcgtcagcg
      241 ccgccgacag acgcgccgcc cccgtgccgg ccccgggccg ttcgacgagg cgcgccaggc
      301 gcagcatcag acgcgccgac ggcggcagca cgttcgggtc gacgagcgcc agcgcgccct
      361 cgcgcgccag cacgaagccg gcgcggaggt tgcgcgcgag atggacgatg tcgccgatca
      421 cgtcagattt tccagccgga atggatggcg acgatgccgc cgctcatgct gcgacatgtc
      481 acgcggcgga atcctgccgc ctcgatcatg cgcgcgaagg ccgcccgtga cgggaagcgg
      541 cggatcgact cgacaagata gcggtaggag tccgcatcgc cggccacgac acggcccatc
      601 gccgggatca cgttgaacga ataggcgtcg tagagtgtgt cgaggccggg cacgtcgaca
      661 tgcgagaact cgaggcacag gaaatgcccg ccacgtcgga gcacccggta ggcctcggcc
      721 agcgcggtct cgagccgcgg cacgttgcgg atgccgaacg cgatcgagta gccgtcgaat
      781 gatttgtcgg cgagcggcag cgtctcggca ttggcctcga cgaaatcgac gcggcccgcg
      841 tagcgcgtcc cggcccgctc gcggccgacc gccagcatct cgccgttgat gtcgagcacg
      901 gtgacctcgg tgagcggccc gcctgcgtcg agcacgcgga acgcgacgtc acccgtcccg
      961 ccggccacgt cgaggtggcg gaaggcgcgc cgcttcggcg gacgcagcgc ggtgacgagc
     1021 gcgtccttcc acgcccgatg cagccccgcc gacatcaggt cgttcatcag gtcgtagcgc
     1081 cgcgcgaccg aatggaagac gtcgttgacc cgctcctgct tgtcgccgag cggcacggcc
     1141 tcaaagccga aatgcgtggt ttcgtcccgg gagcggatca tggggggctc gcttttgcct
     1201 gatgaatagc gaaacgcggc cgttaacgct atgtgaccgg gacgagagag atcgttaacg
     1261 gatgcccgaa cttcccgagg tcgagaccgt gcggcgcggg ctggagcccg ccatggtcgg
     1321 ggcccgcatc gtcgccgtcg agcagcgccg ccccgacctg cgcttcccct tcccggcgcg
     1381 cttcgccgac cgcctcgagg ggcagacggt caccgccctc ggccggcgcg ccaaatatct
     1441 tctcgccgac ctctcgtcgg gcgaggtgct ggtcatgcat ctcggcatga ccgggcgttt
     1501 cctcgttaac caggatggca tcaccttcgc gccgggcgag ttccacgacg aggccggcgg
     1561 cgggcgcaca cacgaccacg tcgtgttccg gctctcgaat ggcgccaccg tcacgtataa
     1621 tgacgcccgt cgcttcggct tcatggacct cgccgctcgg gcagggcttg ccgaaagccg
     1681 gcacttccgc accatgggca tcgagcccct cggcaacgaa ctgtcggggg aggcgatcgc
     1741 gcggctgttc catgaccgca aggcgccgct caaggcagcg ctcatggacc agcggctgat
     1801 cgccgggctc ggcaatatat atgtatgtga ggcgctgttc cgcagcgggc tcaacccgca
     1861 ggccccggcc ggaagcatcg ccaccccggg agggcggccg cgtgaaaaag ctcaccggct
     1921 cgcggaggcg atccgcgacg tcctgactga ggcggtcgag gccggtggct cgactttgcg
     1981 cgactacgcg cagacggacg gctcgctcgg ctattttcag caatcgttcc gggtttacga
     2041 ccgtgaaggc gaggcttgcg tgacgcccgg ctgcggcggc gccgtgaaac gccttgtgca
     2101 gggcggccgc tcgaccttct tctgtccgcg gtgccagggg aggaggcgtt gagagccgaa
     2161 ctcgtcatta ccgcaattgc ggttcttgtc ggaggtccga tgcttgttaa ggccttcctc
     2221 cactacttct cgccgacggc cttttacaac gacgagccgt ggcggcacat tcttctcaag
     2281 gccgcggcgc tcctcctcct gtatgcgggt gccgctctca tcgcctggct gtggtggccg
     2341 cagccgcgat aagagcgcgc cggcttcctg cgccatgtcc atctcgccaa tcgcgaccgc
     2401 agcggttaag agccgctgca ccttgtgggg agcattatgg ctttcgaaac cattctcgtc
     2461 gaaacgcgcg gcaaggtcgg gctcgtcacg ctgaaccggc cgcaggcgct caacgcgctc
     2521 aacgccacgc tggtcgatga attgaacgcg gcgctcgatg ccttggaggc gaaccgcgat
     2581 atcgcctgcg tcgtgatcac cggctcggac aaggcgttcg ccgccggcgc cgacatcaag
     2641 gagatgcagg atctctccta cccgcagacc tatctcgacg atttcgtcgc cacctgggac
     2701 cgggttgcga accggcgcaa gccgctgatc gctgcggtcg ccggcttcgc gctcggcggc
     2761 ggctgcgagc tggccatgat gtgcgacatc atcatcgccg ccgacaccgc tcgcttcggc
     2821 cagcccgaga tcaaggtcgg cgtcctcccg ggttcgggcg gcacgcagcg cctcacgcgc
     2881 gtcgtcggca aggccaaggc gatggagatg tgcctcaccg ggcgcctgat ggacgcggcc
     2941 gaggcggagc gctccggcct cgtggcgcgg gtcgtgccgg ccgccgatct catgaacgag
     3001 gcgttgaaga cggcggaagc catcgcggcg atgtcgctgc ccgccgtcat gatggtcaag
     3061 gaatgcgtca accgcgccta cgagacgacc ctttccgaag gcatccgttt cgagcggcgc
     3121 gtgttccatg ccatgttcgc gactgccgat cagaaggaag gcatggccgc cttcgtcgag
     3181 aagcgcgc
//
LOCUS       DATAIQ010000270         1605 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_190846, whole genome shotgun sequence.
ACCESSION   DATAIQ010000270 DATAIQ010000000
VERSION     DATAIQ010000270.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1605)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1605)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1605
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_190846"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..247
                     /locus_tag="VHN20_04725"
     CDS             <1..247
                     /locus_tag="VHN20_04725"
                     /EC_number="3.4.23.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012252621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TIGR02281 family clan AA aspartic protease"
                     /protein_id="HEX2725105.1"
                     /translation="AGTRPCSTAATPPVATANGRTMAAPVTLDSISVGSITERRVRAL
                     VARPGVLRENLLGMTFLERLASYEVRGNRLILRGRGA"
     gene            307..735
                     /locus_tag="VHN20_04730"
     CDS             307..735
                     /locus_tag="VHN20_04730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725106.1"
                     /translation="MAQASIRDRRSIERLYPREDFEREAGQNADAKATVHRGIRILSP
                     VDAQGQFEAERASRHVGEADPLGDTVFLAPFLQDASAAPAPSDSAYGGPGAGDAMGAS
                     ARKRDDYDAFIARIVGAAQSAEFKPAIGRDDERLRGFHGG"
     gene            complement(790..1014)
                     /locus_tag="VHN20_04735"
     CDS             complement(790..1014)
                     /locus_tag="VHN20_04735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725107.1"
                     /translation="MDALELFAALAVFGGLAAVMAEIWLKDAAIFGEIASDLRAFADP
                     SRELATRPAPVGRKAEPALAVDDGGLMQAA"
     gene            complement(1234..>1605)
                     /locus_tag="VHN20_04740"
     CDS             complement(1234..>1605)
                     /locus_tag="VHN20_04740"
                     /inference="COORDINATES: protein motif:HMM:NF016836.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BON domain-containing protein"
                     /protein_id="HEX2725108.1"
                     /translation="DIAALLERRRIKRVPVVRDGVPVGIVSRANVLRGLIASPRPESA
                     GPAASDVELRRRIEERLADEPWVDLSRLNVVVNGGVAHLWGLVESEDRRRALKIAVQN
                     VAGVREVVDQLTPDWFPNTAG"
BASE COUNT          265 a          551 c          563 g          226 t
ORIGIN      
        1 ggcgggcacg cggccgtgct ccactgcggc gaccccgcct gtggcgaccg ccaatggacg
       61 cacgatggcg gcccccgtca ccctcgacag catcagcgtc ggatcgatca cggaaaggcg
      121 cgtgcgggcg ctggtggcgc ggccgggcgt gctgcgcgag aatctcctgg ggatgacgtt
      181 cctcgaacgg cttgcgtcct acgaggtgcg cggcaaccgc ctgatcctgc gcggccgcgg
      241 cgcctgagat cgccgggtcc ggaacgccgt gctgcggcgg ccgttctgtt cagcaaggag
      301 acagcgatgg cccaagccag cattcgtgac cggcgcagta tcgagcggct ctatccgcgc
      361 gaggatttcg aacgcgaggc cggccagaac gcggacgcca aggcgacggt gcaccggggc
      421 atccgcatcc tctcgcccgt cgacgcgcaa ggccagttcg aggccgagcg ggcatcgcgc
      481 cacgtcggcg aggcggatcc tctcggcgac acggtattcc ttgcgccgtt tctgcaggac
      541 gccagcgccg cgccggcgcc gagcgactcg gcttatgggg gacctggggc aggtgacgcc
      601 atgggggcga gcgcgcgcaa gcgcgacgac tacgatgcct tcatcgcgcg catcgtcggg
      661 gcggcgcagt ccgcagagtt caaacccgcg atcggcaggg acgacgagcg cctgcgcggc
      721 ttccacggcg gctagatcaa aaaaaagcgc cggcaaagcc ggcgctcgaa gcagctcatg
      781 gagcggcgat cacgccgcct gcatgagccc gccgtcgtcg acggcaagcg cgggctccgc
      841 cttgcggccg accggcgccg gccgggtggc cagctcgcgc gaaggatcgg cgaaggcgcg
      901 caggtcactc gcgatctcgc cgaagattgc tgcgtccttg agccagatct cggccatcac
      961 ggcggcgagc ccgccgaaaa cggccaatgc agcgaagagt tcgagagcgt ccatcgggtc
     1021 acctgtgttt tgtgctgtgc acaatatgac agcgaccctg tcctacctca agcggcctgg
     1081 cataccagat gccaatatgg cccatgcgtt taacgcatgg attagcacca cgttaaccat
     1141 aggcttgctt gcagcaccgg tctcgatcag gcccgtccgc gtcgaaacgg cacaaaccga
     1201 gatcgcggcg cgtgcgggct tgccggagcg tgctcagccc gccgtgttgg ggaaccagtc
     1261 cggcgtcagc tggtcgacga cctcgcggac accggcgacg ttctgcacgg cgatcttgag
     1321 ggcgcggcgg cgatcctcgg actcgaccag cccccaaagg tgggcgacgc cgccgttgac
     1381 gacgacattg agccggctga gatcgaccca gggctcgtcg gcgagccgct cctcgatgcg
     1441 cctgcgtagc tcgacgtcgc tcgcagccgg gccggcgctc tcggggcgcg gcgaggcgat
     1501 caggccgcgc aggacattgg cccggctcac gatcccgacg gggacgccgt cgcggaccac
     1561 cggaacgcgc ttgatccgcc gccgctcgag cagcgcggcg atgtc
//
LOCUS       DATAIQ010000271         2448 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_145284, whole genome shotgun sequence.
ACCESSION   DATAIQ010000271 DATAIQ010000000
VERSION     DATAIQ010000271.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2448)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2448)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2448
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_145284"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1483)
                     /locus_tag="VHN20_04745"
     CDS             complement(<1..1483)
                     /locus_tag="VHN20_04745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family peptidase"
                     /protein_id="HEX2725109.1"
                     /translation="MNERVFNDGRFPSGGDSPGERLFGVIIGHEPPLDGAGGTAEVDR
                     RGISLRWLGACILTGLTGAALIGGAIYVSLEGEATFAEVAERAAPAVPRASSTADRSA
                     SAPRKTDKLVRSEVVSLAKHTFRAPMTVRSGDREVIRVRPLVRLATNLSLTSGAYATD
                     VPPFNPMRLFAEAQVDRLQETPAAAPDADISLVKRDLAGIPIEANAPALSDVDVIAQI
                     EEERRLSGDGGARPAVPIPPQLMLSRTLRQPADISDALGYARPLDTSFSSIEVRVVPE
                     NVTTLSKIEPRSSEPLFEERDAALKKGEAFDVLLAANGATPAQVNGILNALGRAKVAA
                     LPEGQQIRILVGPGARPGDGRQVVRVILYGERGIEGIAAVNDRGVFVSVAPPTEGSGL
                     RTAARQPSSEDEEDEEGGGVPLYNSLYETALKHDLPRQTVEELIRIFGYDVDFQKRVA
                     PGDNFELFYALDEESGDRPEILYAAFTIAGEPRRVFRFQSPDDG"
BASE COUNT          422 a          771 c          831 g          424 t
ORIGIN      
        1 aaccgtcgtc gggcgactga aagcgaaaca cgcggcgcgg ctcgccagcg atcgtgaagg
       61 ccgcatacag aatctccggc cggtcgccgg actcttcgtc gagcgcgtag aacagctcga
      121 aattatcccc cggggcgacg cgtttctgga aatcgacgtc gtagccgaag atgcggatca
      181 actcttctac cgtctggcgg ggcaggtcgt gcttgagcgc cgtctcgtag agactgttgt
      241 agagcggaac gccgccgccc tcttcgtctt cctcgtcctc gctgctcggc tgacgcgccg
      301 cggtgcgcag gccgctgccc tcggtcggcg gcgctacgga gacaaaaacg ccgcggtcgt
      361 tcaccgcggc gatgccctcg atgccgcgct cgccgtagag gatcacgcgc acgacctggc
      421 ggccgtcgcc gggccgggcg cccggtccaa cgagaatgcg gatctgctgc ccttccggca
      481 aggcggcgac cttggcgcgg ccgagcgcat tgaggatgcc gttgacctgg gccggagtgg
      541 cgccgttcgc cgcgagcagg acatcgaacg cctcgccctt cttgagcgcc gcatcacgct
      601 cctcgaacaa cggctcggag ctgcgcggct cgatcttcga caacgtggtc acgttctcgg
      661 ggacgacgcg cacctcgatc gagctgaacg aagtgtcgag cgggcgggcg tagccgagcg
      721 cgtcgctgat atccgccggc tggcgcaacg tgcgcgacag catcagctgc ggcgggatcg
      781 gaaccgccgg gcgggcgccg ccgtcgccgg acagacggcg ctcctcctcg atctgggcga
      841 taacgtcgac gtcgctcaag gcgggcgcgt tggcctcgat cgggatgccg gcgagatcgc
      901 gcttgacgag cgagatgtcg gcatcggggg cagccgccgg tgtctcctgg aggcgatcga
      961 cctgcgcctc ggcgaacagg cgcatgggat tgaacggcgg gacatcggtg gcgtaggcgc
     1021 cgctggtcag cgacaggttc gtcgccaggc gcaccagcgg gcgcacgcgg atgacctcgc
     1081 ggtcgccgct gcgcacggtc atgggcgcac ggaaggtatg cttggcgagc gacaccacct
     1141 cggaccggac gagcttatcg gtcttgcggg gggcgctcgc actgcggtct gccgtggacg
     1201 aggcacgcgg caccgccggg gcggcgcgct cggccacttc ggcaaaggtc gcctcgccct
     1261 cgagcgaaac gtagatggcg ccgccgatca gggccgcgcc agtcaggcca gtgagaatgc
     1321 aggcgccgag ccaccgcagg ctgatgccgc ggcggtcgac ctcggccgtg ccgccggcac
     1381 catccagcgg cggctcgtgt ccgatgatca caccgaaaag acgctcgccc ggcgaatcac
     1441 cgccggatgg gaaccggccg tcgttgaaga ctctctcgtt cattccgggc gtgagcttgg
     1501 atgggcgatg tcacagtggg cggcgcgggt cgagggcaga ccatgccccc acccggtcgt
     1561 tgaatcaatg aacaaagaag gaagcgaagc gtcgtccccg ccgcaaattg ccctgctttc
     1621 tatgaccatt gtgaggcggc gcggggaggg ggcgcaaaaa tcggaaagag ccttcggcgg
     1681 aatgcctgga gtggtgcgtc gacggctctg tccggcagcc cacgcaggcg cctcggacgc
     1741 gagggcgcag gacagtcgcg tcggcagccc ccggtcttct gcgagatgcg attccgccgt
     1801 gcctggggcc tgcaaaagtg cgttccctca atatcagatg cacgtggcga tgggcttctc
     1861 ccatggttcg ccgatcctcc cgccgaaccc ttcgtttcgg gttgcggtcg cgcttcaaag
     1921 cgcctggttc gtcaccatgt gtgggcctgg atttggcgcg gccgcgaagc tttcccgatc
     1981 ctttctcgaa aagcctgatt ttcgacggaa cgcgcctgaa agagaggcgg tacgtcacca
     2041 aatctggctt ggaccaagcg attgccgcga gacttttcag cggctgtttt ttcggtcctc
     2101 ttcccggtca aaaaattgat taaagcgtgt tgacagggaa ataggggcgg tctaaataac
     2161 cacccatcga cgccgccgct gacgcgtgac ggcgccaaac gcttcctcag tctgccgggc
     2221 ttgattgccc gacctcggtc gggtcaagtg ccgtcgtctt gtggaagctg catcatttga
     2281 tgctgctctt tgacaagtga agaaagaaag agaaacgtgg acggcggagt ccttgcggac
     2341 cgtcaggatc ctcggatccc gatggtcgat gagacttcgg cggtactacg ttttggagct
     2401 cacatggatt tgcggaaacg caagatccag tgtgcagact ccgtcaat
//
LOCUS       DATAIQ010000272         1613 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_237378, whole genome shotgun sequence.
ACCESSION   DATAIQ010000272 DATAIQ010000000
VERSION     DATAIQ010000272.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1613)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1613)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1613
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_237378"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..411)
                     /locus_tag="VHN20_04750"
     CDS             complement(<1..411)
                     /locus_tag="VHN20_04750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725110.1"
                     /translation="MVEGDGGVHATHSREARPVTVLVTDETGRPLDAVALSFRLPEDG
                     PSGAFSNGMKSEIATTGKDGRASCSAVRWNGVAGPFELRITAVRDDLRAGMVSPQYLS
                     SEIKRAGRRGGGRGKWVVMAAAAGGAAAAAGLLGG"
     gene            complement(489..1205)
                     /locus_tag="VHN20_04755"
     CDS             complement(489..1205)
                     /locus_tag="VHN20_04755"
                     /inference="COORDINATES: protein motif:HMM:NF025053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PP2C family serine/threonine-protein
                     phosphatase"
                     /protein_id="HEX2725111.1"
                     /translation="MLDTFGVSDPGCVRTNNEDYYLLAPALGLYVVADGMGGAQAGEH
                     ASKLAGDTVAEIVWNSGTTSGEVLLTAIKEANRRVLAAAENDPSLHGMGTTLTAAWKV
                     GDEMLLANVGDSRAYLCHDSQLHIITEDQTWVNEVGRRLGIGEDALKTHPMRHVLTMA
                     IGVSDSIRIQSYVVPLQPGMQFLLCSDGLHGVLDPQKILETLSGPDPLEGKCKKLVEA
                     AKLSGGPDNITALIVAVQPD"
     gene            complement(1260..>1613)
                     /locus_tag="VHN20_04760"
     CDS             complement(1260..>1613)
                     /locus_tag="VHN20_04760"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX2725112.1"
                     /translation="QAVPLSEVLNNLGAAQSRRNLPAALDNFEKALEGNEGDPDYHFN
                     VGYALFKQGDYEGAAEKFRAVLDRRPDDASATTMLGRCLNRGRAGRVEAMERLKETYE
                     ESAYLQLKAVLEPKR"
BASE COUNT          268 a          511 c          534 g          300 t
ORIGIN      
        1 gccgccgagc aggcctgcgg ccgccgccgc gccgccggcc gctgccgcca tcacgaccca
       61 tttgccgcgc ccgccgccac gacgtccggc gcgcttgatc tccgacgaga ggtattgagg
      121 actgaccatg ccggcgcgca gatcgtctct gacggccgtg attcgcaact caaagggacc
      181 ggcgacccca ttccatcgaa ccgcggagca ggaggcgcgg ccatcctttc ccgtggtcgc
      241 gatctcactt ttcatgccgt tcgagaacgc gccgctcggg ccgtcctcgg gtaggcggaa
      301 gctcagtgcg acggcgtcaa gcggccgccc cgtctcgtcg gtgaccagca ccgtgaccgg
      361 acgcgcctcg cgcgagtggg tcgcatggac gccgccgtcg ccctccacca tccggatctg
      421 gaggatggaa gcggcagcgg cggcgtctac gagggtcagg gggaggagaa agagaagcgc
      481 aggccggatc agtcgggctg gacggccacg atgagcgccg tgatgttgtc gggcccgccg
      541 gagagtttcg ccgcttcgac cagcttcttg cacttaccct ctagtgggtc agggccggat
      601 aaagtctcaa gaattttctg agggtctagg actccatgaa gtccgtcgct gcacagcagg
      661 aactgcatcc ccggctgcag cggcacgacg taggactgga tgcggatgga atcgctgacg
      721 ccgatagcca tcgtgaggac gtggcgcatg gggtgggttt tgagagcatc ttcgccgatg
      781 ccgaggcggc gcccgacctc attgacccag gtctgatcct cggtaatgat gtggagttgc
      841 gagtcgtggc agaggtaggc gcggctgtcg ccgacattgg ccagcagcat ctcgtccccg
      901 accttccaag cggccgtgag tgtcgttccc atcccatgca gggagggatc gttctcggcg
      961 gcggcgagca cgcggcggtt ggcttctttg atggcggtca gcagcacttc gccgctcgtc
     1021 gtcccggaat tccagacgat ctcggcgacg gtatcgccgg cgagttttga ggcgtgctct
     1081 ccggcctgcg ccccgcccat gccgtcggct accacataga gccccagcgc cggcgcgagc
     1141 agatagtagt cctcgttatt cgttcggacg cagccagggt ccgatacgcc gaaggtatcg
     1201 agcatgagca ttttgattat acagagtggc tcttcagacc aagttcgggg cgcgcgcgct
     1261 caccgcttgg gctcgagcac ggctttcaac tgcaggtaag cggattcttc gtaggtttcc
     1321 ttgagccgct ccatggcttc gacgcgtcct gcgcggccac ggttgaggca acggccaagc
     1381 atggttgttg ccgacgcgtc atcgggacgc cgatcgagca cggcgcggaa cttctccgcc
     1441 gcgccctcgt aatctccctg cttaaagagc gcatacccga cgttgaagtg ataatcggga
     1501 tcgccctcgt tgccttcgag cgccttttcg aaattgtcga gggctgcggg gagattgcgg
     1561 cgcgactggg cggcgccgag gttattcagc acctcactga gcggaaccgc ctg
//
LOCUS       DATAIQ010000273         2040 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_106508, whole genome shotgun sequence.
ACCESSION   DATAIQ010000273 DATAIQ010000000
VERSION     DATAIQ010000273.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2040)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2040)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2040
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_106508"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            195..1439
                     /gene="argJ"
                     /locus_tag="VHN20_04765"
     CDS             195..1439
                     /gene="argJ"
                     /locus_tag="VHN20_04765"
                     /EC_number="2.3.1.1"
                     /EC_number="2.3.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012334526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004358 - glutamate N-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glutamate
                     N-acetyltransferase/amino-acid acetyltransferase ArgJ"
                     /protein_id="HEX2725113.1"
                     /translation="MSYSISPLAPETYPELPPVWGVRLATAQAGIRYKDRTDVLYVSF
                     PQGAAVAGVLTRSKCPSAPVDWCRTHLTGGTAQALVVNSGNANAFTGVRGASAVKLTA
                     EIAARAAGGSPDRIFLASTGVIGEPLDASRFEGVLAECDQRADEEFPWLEAAKAIMTT
                     DTFPKVATRTAKLGDVAVTINGIAKGAGMIAPDMATMLAFVFTDAPIMAPALQPLLKR
                     AADRSFNCITVDGDTSTSDTLLIFATGGAAFAGAPTITKADDRRLAPFRKALDALLVD
                     LAQQVARDGEGARKFVTVQVSGATSARSAHRVAMSIANSPLVKTAIAGEDANWGRVVM
                     AIGKAGEPADRDRLAIWFGDIRVAVEGARDPAYDEATTSAYMKNQAITLRVDLGLGKG
                     KATAWTCDLTKEYVEINGDYRS"
     gene            complement(1446..1805)
                     /locus_tag="VHN20_04770"
     CDS             complement(1446..1805)
                     /locus_tag="VHN20_04770"
                     /inference="COORDINATES: protein motif:HMM:NF037016.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HEX2725114.1"
                     /translation="MRVVVLAAAFCLSAVAAQAQTCRVPTIRTFDNQTVDGQMTVKAG
                     TRCNIFLQNSMGPVETTRIVSRPAAGSATVSGTRVTYVPRAGYTGPDRFTYARAGQDR
                     YGRASVKTVNVHVQVIP"
     gene            1874..>2040
                     /locus_tag="VHN20_04775"
     CDS             1874..>2040
                     /locus_tag="VHN20_04775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HEX2725115.1"
                     /translation="MKILLVAAVALVDADNRILLARRPEGKPMAGLWEFPGGKVEPGE
                     RPEETLIRELH"
BASE COUNT          359 a          697 c          674 g          310 t
ORIGIN      
        1 cctggacgag cccaagaagc cggacgagca gaagaagccg taacggcccg ggccggtcgg
       61 ccggggccgc acccggcctg atccgggatc gcccgaaaac cccttccgac gggggcggat
      121 cgattcatct tgaagcgatc ccgcgccgag cccacccttc ccgccgccgc gggagaggtg
      181 ttatggcccc gctcatgtcc tattccatct ctcccctcgc acccgagacc tatcccgaac
      241 tgccccccgt ctggggggtg cgcctcgcga ccgcacaagc cggcatccgc tacaaggacc
      301 gcacggacgt cctttatgtg agcttcccgc aaggggcggc cgtggcgggg gtgctgacga
      361 ggtcgaaatg cccgtcggcg cccgtcgact ggtgccggac ccacctgacc gggggcacgg
      421 cgcaggcgct cgtcgtcaat tccggcaacg ccaacgcctt cacgggcgtg cgcggggcat
      481 cggcggtcaa gctcacggcg gagatcgcgg cacgggctgc gggcggctcg ccggaccgga
      541 tcttcctcgc ctcgaccggc gtgatcggcg aaccgctcga cgcctcacgc ttcgaggggg
      601 tgctggccga gtgcgatcag cgcgctgacg aggaatttcc gtggctcgag gccgccaagg
      661 cgatcatgac cacggacacc tttccgaagg ttgcgacgcg caccgcgaag ctgggcgacg
      721 tcgccgtcac catcaatggc atcgccaagg gggccggcat gatcgcgccc gacatggcga
      781 cgatgctggc cttcgtattc accgatgcgc cgatcatggc ccctgccctc cagccgctgc
      841 tcaagcgcgc ggccgaccgc agcttcaact gcatcaccgt cgacggcgat acctcgacgt
      901 cggacacgct gttgatcttc gccaccggcg gcgccgcttt cgcgggtgcg ccaacgatca
      961 cgaaagccga cgaccgccgg ctcgctccgt tccgcaaggc gctcgacgcg ctgctcgtcg
     1021 atcttgccca gcaggtcgca cgcgacggag agggcgctcg taaattcgtg accgtgcagg
     1081 tgagcggcgc gacgagcgcc cgctctgcgc atcgtgtcgc gatgtcgatc gccaattcgc
     1141 cgctggtgaa gacggccatc gccggcgagg acgccaactg gggacgcgtt gtcatggcca
     1201 tcggcaaggc tggcgagcct gccgatcgcg accggctcgc gatctggttc ggcgacatcc
     1261 gcgtcgcggt cgagggcgcc cgcgatccgg cctacgacga agccacgaca tcggcctaca
     1321 tgaagaacca ggccatcacg ctgcgcgtcg atcttggcct gggcaagggc aaggcgacgg
     1381 cgtggacgtg cgacctgacc aaggaatatg tcgagatcaa cggtgactat cgcagctagc
     1441 gacaatcagg gaatgacctg cacgtgcacg ttgaccgtct tcacggacgc tctgccgtag
     1501 cggtcctggc cggcgcgggc ataggtgaag cgatccggcc cggtataacc ggccctcggc
     1561 acgtaggtga cgcgcgtgcc gctcaccgtc gccgatccgg ctgccggccg actcacgatg
     1621 cgcgtcgttt cgacaggccc catggagttc tgcaggaaaa tgttgcaacg cgtgccggcc
     1681 ttcactgtca tctggccgtc gaccgtctgg ttgtcgaacg tgcggatggt cgggacacgg
     1741 caagtctgcg cttgagcggc gacggcagac aggcaaaacg cggcagcgag aacaacaacc
     1801 ctcatacgag atcccggata cagcgccgcc cggggaggat ttaagaaaat ttgcccagag
     1861 tcaacggaga gccatgaaaa tcctccttgt cgccgccgtc gcgctcgtcg atgcggacaa
     1921 ccgcatcctc cttgcccggc gcccggaggg caaaccgatg gccggcttgt gggaattccc
     1981 cggcggcaag gtcgagccgg gagagcggcc cgaggagacc ctgatacgtg agctgcacga
//
LOCUS       DATAIQ010000274         3417 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_329401, whole genome shotgun sequence.
ACCESSION   DATAIQ010000274 DATAIQ010000000
VERSION     DATAIQ010000274.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3417)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3417)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3417
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_329401"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..897
                     /locus_tag="VHN20_04780"
     CDS             <1..897
                     /locus_tag="VHN20_04780"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEX2725116.1"
                     /translation="PMLDVVIVGGGPAGLSAALILGRCRRRVLLCDAGHPRNRVSHAV
                     NGLLTRDGIEPDELRRIGREDLKKYPSVEVRDIEVCDADLIEGGFEVLLRDGQRHRAR
                     KLLLATGLVEDLPDIPGFRHLFGRGVYNCPYCDGWENRDQPIAVYGLGDDGVGLAVEM
                     LVWSRDVVLCTDGAANLGAEDKARLDRHGIPVVEKKIALLEGDDGLRRIVFEDGDALE
                     RKALFYIFGQREPSPLVEKLGCELTEKGVVETRSYERTNVPGLYAAGDASRRVQFAIV
                     AAAEGAVAGFAINTELYKEDLS"
     gene            912..1481
                     /locus_tag="VHN20_04785"
     CDS             912..1481
                     /locus_tag="VHN20_04785"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012330494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HEX2725117.1"
                     /translation="MTHQIIDVRTIYEGWGRLLAIRIRLPDGQVITREVEDHGAAVSV
                     LPYDPDRRVATLVRQFRAPVFHATGQPDLLEAPAGMLDEDDPAACARREALEEVGLTL
                     TSLEPVGAAWTTPGVSTELMHLYLAPYRAADRTGAGGGVADEHENITICEISLAELAA
                     MADAGSLADVKTLALVQTLRLRRPDLFAR"
     gene            complement(1665..2285)
                     /locus_tag="VHN20_04790"
     CDS             complement(1665..2285)
                     /locus_tag="VHN20_04790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018184259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEX2725118.1"
                     /translation="MLTIWGRTNSINVQKVLWCCAELGLAYKRIDAGGAHGVTNTPDY
                     LAMNPNALVPTIDDDGLVLWESNVIVRYLAAKHGQGTLHPADLRERAEADRWMDWQVT
                     TLWAGLRSLFLGYVRTPPEQQDAAALAAAQRSSEQALTILDRHLKDRAYVAGPRFTMG
                     DIPAGISVYRWYALPIERPDFPHVKRWYDRLTERPGFQTHVMQPLS"
     gene            complement(2409..>3417)
                     /locus_tag="VHN20_04795"
     CDS             complement(2409..>3417)
                     /locus_tag="VHN20_04795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008968771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HEX2725119.1"
                     /translation="PLPEARRMSGREFLHAFILGVEVECRIGNAVYPNHYDVGWHITG
                     TAGVFGAAAAAGKVLGLDRQQMTWALGIAATQSSGLREMFGTMCKPFHPGRAAQNGLF
                     AAHLAQQNFTSSDRGIEAPRGFAHVLSTKFDANEITGKLGETWEISLNTYKPFACGIV
                     IHPAIDGCIQLRNAHGLKAKDIASIALKVHPLVLELTGKTEPRTGLEGKFSVYHSCAA
                     AIVHGRCGEHEYSDDVVADPEIVALRRKVRAEATAGIHEDQVDVTLTTTDGRTLHVFV
                     EHAIGSLERPLTDQELDAKVRDLCEPVIGGDATRRLVDACRGTEKATSLRAVIDASIP
                     A"
BASE COUNT          527 a         1155 c         1163 g          572 t
ORIGIN      
        1 cccatgctcg atgtcgttat cgtgggcggc gggccggccg gcctcagcgc cgccctgatc
       61 ctgggccgct gccgccggcg cgtgctgctg tgcgacgccg gccacccgcg caaccgggtc
      121 tcccacgcgg tcaacggcct cctcacccgc gacggaatcg agcccgacga gctgcgccgg
      181 atcggccggg aggacctcaa aaaatacccg agcgtcgagg tgcgcgacat cgaggtctgc
      241 gacgccgacc tgatcgaggg cggtttcgag gtcctgctca gggacgggca acgccaccgc
      301 gcccgcaagc tcctcctcgc caccggcctc gtcgaggatc tccccgacat tccaggcttc
      361 aggcacctgt tcgggcgtgg cgtctataat tgcccgtatt gcgacggctg ggagaaccgc
      421 gaccagccga tcgccgtcta cgggctcggc gacgacggcg ttggcctcgc cgtcgagatg
      481 cttgtctgga gccgcgacgt cgtgctgtgc accgatggcg cagccaatct cggcgccgag
      541 gacaaggcga ggctcgaccg ccatggcatc ccggtggtcg agaagaagat cgcgcttctg
      601 gagggcgacg acgggctgcg ccgtatcgtc tttgaggacg gcgacgcgct cgagcgcaag
      661 gccctcttct acatcttcgg ccagcgcgag ccgtcgcccc tggtcgaaaa gctcggctgc
      721 gagctgacgg aaaagggggt cgtcgagacg cgcagctacg agcgcaccaa cgtgcccggc
      781 ctgtatgcgg ccggcgatgc ctcgcgtcgg gtgcagttcg caatcgtcgc cgcggcggaa
      841 ggcgccgtcg ccggcttcgc catcaacacc gaactctaca aagaagacct ttcgtaggcg
      901 gcggaccggc catgacgcac cagatcatcg acgtcaggac gatctacgaa ggctgggggc
      961 gccttctcgc catccgcatc cgcctgcccg atgggcaggt catcacgcgc gaggtcgagg
     1021 accatggcgc cgcggtctct gtgctgccct acgacccgga ccggcgggtg gcgacgctgg
     1081 tgcggcagtt tcgggcgccg gtctttcatg cgaccggcca gccggacctc ctcgaggccc
     1141 cggccggcat gctcgacgag gacgatcctg ccgcttgcgc ccgtcgcgag gccctcgagg
     1201 aggtcggtct cacgctgacg agcctggagc cggtcggcgc cgcctggacg acgcccggcg
     1261 tctcgacgga attgatgcac ctctatctcg ccccttaccg ggccgcggac cggaccggcg
     1321 cgggcggcgg cgtcgccgac gagcacgaga acatcacgat ctgcgaaatc tcgctcgccg
     1381 agcttgccgc tatggccgac gccggcagcc tcgctgacgt caagacgctg gcgctggtcc
     1441 agaccttgcg ccttcgccgg cctgatctgt ttgcgcgata gagcatgatc cggcgaagtg
     1501 gataccgctt cgccgaaaaa gggcttgtcc cggactggat ccgggatctt gcggccgaat
     1561 aagaaagagg gcgggatcgt ttcaatctga attgatccgc tcgagcgtgc tcgggcccga
     1621 cgttgcgtgc cgcccaagtt ggcggttggg tgtgcaacag gctctcagct cagtggctgc
     1681 atcacgtggg tctggaagcc cggccgctcg gtgagccggt cgtaccagcg cttcacatgc
     1741 gggaaatcgg gccgctcgat cggcagcgca taccagcggt agaccgagat gccggcggga
     1801 atgtcgccca tggtgaagcg cggcccggcg acgtaggcgc ggtccttcag gtggcggtcg
     1861 aggatcgtga gggcctgctc gctgctgcgc tgcgccgcgg cgagggcggc ggcgtcttgc
     1921 tgctcgggcg gcgtcctcac gtagccgagg aacagcgacc gcagccccgc ccacagggtg
     1981 gtcacctgcc agtccatcca gcggtcggcc tcggcacgct cgcggagatc tgcgggatgc
     2041 agcgtgccct gtccgtgctt cgccgccaga tagcgcacga tcacgttcga ttcccacagc
     2101 acgagcccgt cgtcgtcgat cgtcggcacc aatgcgttcg ggttcatcgc caggtagtcc
     2161 ggcgtgttgg tgacgccgtg cgccccgccg gcgtcgatgc gtttgtaggc gaggccgagc
     2221 tcggcgcagc accacagcac cttttgcacg ttgatcgagt tggtgcggcc ccagatcgtc
     2281 agcatgttcg cctcatcaaa tccgtctgac gaatgctgcc ccgaacttga tccggggcgc
     2341 tccggttcgc cggtgaaaat gcgtcgcaag cacggtctca agccgattcc gcgcgagtgg
     2401 aaacggccct aggcagggat ggacgcatcg atcacggcgc ggagcgacgt cgctttttcc
     2461 gtgccgcggc acgcgtcgac caggcgtctc gttgcgtcgc cgccgatgac cggctcgcac
     2521 aggtcgcgca ccttcgcgtc gagctcctgg tcggtcagcg gacgctcgag gctgccgatg
     2581 gcatgctcga cgaacacgtg cagcgtgcgc ccgtcggtgg tcgtcagcgt gacgtcgacc
     2641 tgatcctcgt ggatgccggc cgtcgcttcg gcgcgcacct tgcgacgcag cgcgacgatc
     2701 tccgggtcgg ccaccacgtc gtccgaatat tcgtgctcgc cgcagcggcc gtgcacgatg
     2761 gccgcggcgc aggaatgata gaccgagaac ttgccctcga gccccgtgcg cggctccgtc
     2821 ttgccggtca gctcgagcac gagcggatgc actttcagcg cgatcgacgc gatgtccttc
     2881 gccttgaggc cgtgcgcgtt gcgcagctgg atgcagccgt cgatggccgg atggatgacg
     2941 atgccgcacg cgaacggctt gtaggtgttc agcgagatct cccaggtttc gccgagcttg
     3001 ccggtgatct cgttggcatc gaacttggtc gagagcacat gcgcgaagcc gcgcggcgct
     3061 tcgatgccgc gatccgagct cgtgaaattc tgctgcgcga gatgcgccgc gaacagcccg
     3121 ttctgcgccg cacgtccggg atggaacggc ttgcacatgg tgccgaacat ttcgcgcagg
     3181 cccgacgact gcgtcgcggc gatgccgagc gcccacgtca tctgctggcg gtcgaggccg
     3241 agcaccttgc cggctgccgc ggcagccccg aacacgccgg ccgtgccggt gatgtgccag
     3301 ccgacatcat agtggttcgg atagacggcg ttgccgatgc ggcactccac ctctacgccg
     3361 agaatgaagg cgtgcaggaa ctcgcgcccg ctcatccgtc gcgcctccgg aaggggc
//
LOCUS       DATAIQ010000275         1945 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_383406, whole genome shotgun sequence.
ACCESSION   DATAIQ010000275 DATAIQ010000000
VERSION     DATAIQ010000275.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1945)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1945)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1945
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_383406"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..544)
                     /locus_tag="VHN20_04800"
     CDS             complement(<1..544)
                     /locus_tag="VHN20_04800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015687403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HEX2725120.1"
                     /translation="MRDRVSDEEWKIRVDLAAAYRLVAYYGWDDLIFTHLSARVPGPE
                     HHFLLNPYNLMFEEVTASSLVKVDTSGNPVEPTPFITNPAGFTIHSAIHMAREDAQAV
                     MHLHTPAGQAVSAHEEGLLPLTQTAMLVRSDLAFHDYEGVATDLDERERLVADLGDKG
                     GMILRNHGTLALGGNVGECFV"
     gene            complement(613..1263)
                     /gene="maiA"
                     /locus_tag="VHN20_04805"
     CDS             complement(613..1263)
                     /gene="maiA"
                     /locus_tag="VHN20_04805"
                     /EC_number="5.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011579403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016034 - maleylacetoacetate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006559 - L-phenylalanine catabolic process
                     [Evidence IEA];
                     GO_process: GO:0006572 - tyrosine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="maleylacetoacetate isomerase"
                     /protein_id="HEX2725121.1"
                     /translation="MTRPVLHDYFRSSASYRVRIALGLKGIDYDRRSINLAEGEQKSA
                     LFRAANPQGFVPLLEIDDLRLTQSLSIIVYLDQTRPEPPLLPRDPADSAHVRSLALAI
                     ACDIHPLNNLRVLKYLKGALGQEQAAVDRWYAHWVSEGLAALESLAAPRAGAFLYGDT
                     PSLADVCLVPQLYNARRFAVPLDPYPTLRRADESASALPAFAAAHPDRIAQEDMAK"
     gene            complement(1481..1879)
                     /locus_tag="VHN20_04810"
     CDS             complement(1481..1879)
                     /locus_tag="VHN20_04810"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017503239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016790 - thiolester hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HEX2725122.1"
                     /translation="MSRPTFEMAFTAGPEHIDELGHVNNAVWVQWIQDVAVAHWHAVA
                     DPAHHDAYIWVVVRHEIDYLRFVLPGETVTARTWVGDAPKGARFDRHMEFTGEDGKVR
                     VRARTTWAIIDRATGRPLRVPPEVIAPFME"
BASE COUNT          317 a          626 c          685 g          317 t
ORIGIN      
        1 tgacgaaaca ttcgccgaca ttgccgccga gagcgagcgt gccatggttg cgcaagatca
       61 tcccgccctt gtcgccgaga tcggcgacca gccgctcgcg ctcgtcgagg tcggtcgcga
      121 cgccctcata atcgtggaag gcgaggtcgg aacggaccag catcgccgtc tgggtcagcg
      181 gcagcagccc ttcttcgtgc gcgctcaccg cctggcccgc gggggtgtgc agatgcatca
      241 ccgcctgcgc gtcctcgcgc gccatgtgga tcgcgctatg gatggtgaag ccggccgggt
      301 tggtgatgaa cggggtcggc tcgaccgggt tgccgctggt gtcgaccttg accagcgagc
      361 tagccgtcac ctcctcgaac atcagattgt aggggttgag gagaaaatga tgctcgggcc
      421 ccggcacccg cgccgacaga tgcgtgaaga tgaggtcgtc ccagccgtaa taagcgacca
      481 gccgataggc ggcggcgaga tcgacccgga tcttccattc ctcgtcgctg acccggtcgc
      541 gcatcggcgg gatggcgatc tcgtcgatcc gcgccttgtc ggaaattccg cggttcatct
      601 cgtcgacgcg gttcatttgg ccatgtcctc ctgggcgatc cggtcggggt gggcggcggc
      661 gaacgccggc agcgcgctcg cgctctcgtc ggcccggcga agcgtcggat agggatcgag
      721 cggcaccgcg aagcgccgcg cattgtagag ctggggcacg aggcagacgt cggccaggct
      781 cggcgtgtcg ccgtaaagga aggcgccggc gcgcggcgct gcgagcgatt cgagcgcggc
      841 cagcccctcg ctgacccagt gggcgtacca gcggtcgacc gccgcctgct cctgtccgag
      901 cgcgcccttc agatatttga gcacgcgcag attgttgagc gggtggatgt cgcaggcgat
      961 cgccagcgcc aggctgcgga catgggcgct gtcggcgggg tcgcgcggca gcagcggcgg
     1021 ttcgggccgg gtctggtcga ggtagacgat gatcgacagg ctctgggtca gcctcaagtc
     1081 gtcgatctcg agcaatggaa cgaacccctg ggggttggcg gcgcggaaca gcgccgattt
     1141 ctgctcgcct tccgccaggt tgatcgatcg ccggtcgtag tcgatgccct tgaggccgag
     1201 cgcgatgcgc acccggtacg aggccgagga gcggaaataa tcgtgcagca cggggcgcgt
     1261 catggcgtca gcctgcgccg cgaatcgggc gccgtcaacg aatcggcgcg gatcgcggcg
     1321 aggcgtcaca ttgcaatgtg attcggcgcg aaaggtcacg aaagtcacgc tacgtacccg
     1381 tgaccttcgg ggttcgccga gccccgcccg gccggtcgag cgaaggaagt gggcgggagc
     1441 atcgcgattt ccgggcaacg caaatccaaa taggacagcg ctattccatg aacggcgcga
     1501 tcacctccgg cgggacccgg agcggccggc cggtcgcgcg gtcgatgatc gcccacgtgg
     1561 tgcgggcgcg gacccgcacc ttgccgtcct cgccggtgaa ttccatgtgc cggtcgaagc
     1621 gggcaccctt gggcgcatcg ccgacccagg tgcgcgccgt caccgtctcg cctggcagca
     1681 cgaagcgcag gtaatcgatc tcatggcgga ccaccaccca gatgtaggcg tcgtgatggg
     1741 cggggtcggc gaccgcgtgc cagtgcgcga cggcgacgtc ctgaatccac tgcacccaca
     1801 ccgcattgtt gacgtggccg agctcgtcga tgtgctcggg cccggcggtg aacgccatct
     1861 cgaacgtcgg cctgctcatg ccacctgcgt gaggacgaag gcataagcct cggcgacctc
     1921 cttgagatgg tcccaccgcc cagat
//
LOCUS       DATAIQ010000276         1518 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_106545, whole genome shotgun sequence.
ACCESSION   DATAIQ010000276 DATAIQ010000000
VERSION     DATAIQ010000276.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1518)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1518)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1518
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_106545"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..545
                     /locus_tag="VHN20_04815"
     CDS             <1..545
                     /locus_tag="VHN20_04815"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX2725123.1"
                     /translation="VLVLLYKRVMPPFVNMGSLILAPLGGALALHLVGMPISMPVFIG
                     LLMLFGIVAKNSILLVDFAVEMMDHGMTKEEAIVEAGHKRAQPIVMTTVAMVAGMIPI
                     ALSLTGDGSWRAPMGVTVIGGLIMSTFLTLLLVPAYFSLAIDIEQWIGSKLGRHLRAT
                     AHEMPGGEPSHGGAVPQPAE"
     gene            646..>1518
                     /locus_tag="VHN20_04820"
     CDS             646..>1518
                     /locus_tag="VHN20_04820"
                     /inference="COORDINATES: protein motif:HMM:NF016196.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF445 domain-containing protein"
                     /protein_id="HEX2725124.1"
                     /translation="MATGLLVVMAIAFAITRVLEARYSWLSFVKAFAEAAMVGGLADW
                     FAVTALFRHPLGLPIPHTAIIPRNKDRIGATLAAFICDNFLVAHVVARRMRNIDIAAA
                     AGRFLRTPSGEGTRIRRGASRLIADLFESLDDERLGGIVKGAISQRIARTEVSPLLGA
                     ALASAIEDNRHVPMLEAAIRALARALDANEPLIREMVRKRASWVLRLASLDEKLADAI
                     LDGLRKLTLEMGTDPDHPVRHKMVEALTTLAQDLQHKPETRARVEGWKEELLANRSVA
                     QWLDRLWQRGRAAII"
BASE COUNT          243 a          501 c          514 g          260 t
ORIGIN      
        1 cggtgctggt gctgctctac aaacgcgtca tgccgccgtt cgtgaacatg ggctcgctga
       61 tcctcgcgcc tttgggaggc gcgctggcct tgcacctggt cggcatgccg atctcgatgc
      121 ccgtgttcat cggcctgctg atgctgttcg gcatcgtcgc caagaactcg atcctgttgg
      181 tcgacttcgc ggtggagatg atggaccacg gaatgaccaa ggaagaggcg atcgtcgaag
      241 ccggtcacaa gcgggcgcag ccgatcgtta tgaccaccgt cgcgatggtc gcgggcatga
      301 tcccgatcgc gctctcgctc accggggacg gcagttggcg cgcgccgatg ggggtgacgg
      361 tgatcggcgg cctgatcatg tcgaccttcc tgaccctgct gctcgtgccg gcctatttca
      421 gcctggcgat cgacatcgag cagtggatcg gcagcaagct cggccggcac ctcagggcca
      481 ccgcccacga gatgcccggc ggtgagccga gccatggcgg agcggtgcct caaccggccg
      541 agtgaacctg aacggcggtt cggctattga acgggtcaga tgacccgcgc cggaccgctc
      601 gccagattca atcctgccca acccggagcg gccggcatga aggcggtggc caccggcctg
      661 ctggtggtca tggccatcgc cttcgccatc acgcgggtgc tggaggcgcg ctattcatgg
      721 ctgagcttcg tcaaagcgtt cgctgaagcc gccatggtcg gcggcttggc cgactggttt
      781 gccgtgaccg ccctgttccg ccatccgctc gggctgccga tcccgcacac ggcgatcatc
      841 ccgcgcaaca aggatcggat cggcgcgacc ctggccgcct tcatctgcga caatttcctg
      901 gtcgcgcatg tggttgcccg gcgcatgcgc aacatcgata tcgccgcggc tgccggacga
      961 tttctccgca cgccgagcgg tgaaggcacc cgaatccggc gcggtgcttc gcgcctgatc
     1021 gcagacctgt tcgaatccct tgatgacgaa cgcttgggcg ggatcgtcaa aggcgcgatc
     1081 tcgcagcgga tcgccaggac cgaggtgtcg ccgctgctcg gggcggcgct ggcatccgcc
     1141 atcgaggaca accgccacgt cccgatgctt gaagcggcga ttcgcgccct agcgcgcgcg
     1201 ctggacgcca acgagccgct gatccgcgag atggtccgca agcgtgccag ctgggtgctg
     1261 cgcctggcct cattggacga gaagctggcg gacgccatcc ttgatggcct gcgcaagctg
     1321 acgctggaga tgggcaccga tcccgaccac cccgtgcgcc acaagatggt cgaggcgctg
     1381 acgaccctgg cgcaggacct gcagcacaag ccggagaccc gggcgcgggt cgaaggctgg
     1441 aaggaagagc tgctcgccaa ccggtcggtt gcgcagtggc tcgaccggct gtggcagcgc
     1501 gggcgtgcgg ccatcatc
//
LOCUS       DATAIQ010000277         1672 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_383493, whole genome shotgun sequence.
ACCESSION   DATAIQ010000277 DATAIQ010000000
VERSION     DATAIQ010000277.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1672)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1672)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1672
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_383493"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..201)
                     /locus_tag="VHN20_04825"
     CDS             complement(<1..201)
                     /locus_tag="VHN20_04825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011474041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF892 family protein"
                     /protein_id="HEX2725125.1"
                     /translation="MGLFTKEITTMDELFQHVVQDIYYAEQQIKKSLPDMIAKATNRE
                     LTAALKAHLEETEKQISRLEQVF"
     gene            complement(319..1530)
                     /locus_tag="VHN20_04830"
     CDS             complement(319..1530)
                     /locus_tag="VHN20_04830"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX2725126.1"
                     /translation="MNDQSRHLAQYFSNVGHLLSHLLMLLYPTVVLTLERQFNLSYGE
                     LLALSVPGAFLYGICALPAGWLGDRWSAEYMMVIFYVGSGLAAILTGLATGPMGIAIG
                     LTLVGLFGAIYHPVGLAWLVRNAEHRGRALGLNGLFGSIGVGTASLVAASLTALASWR
                     AAFIVPGTLCIVLGVGLWLAVRAGLVVAATQDRKPQDGPAREAVLRAFFVLSVTMLCA
                     GLTWHALTVVMPKLFEQRLPLITQGSTVMVGAIVTMVFALSAATQLLGGWVADRFPLK
                     WAYVISWSVQVPLILVLAYAWELGLVVTMMLVFCTVVISTPVENALLVRYTPGRWRAT
                     AFGAKFVLSLGLGSLGLPLVALVHERTGDFFWLFMILSGLALTIAITGLLLPADSHSE
                     TVAKAVAVPAE"
BASE COUNT          330 a          538 c          552 g          252 t
ORIGIN      
        1 gaagacctgc tcgaggcggg agatctgctt ctccgtctct tccaggtgag ccttgagggc
       61 cgccgtcagc tcgcggttgg tggccttggc gatcatgtcc ggcagggact tcttgatctg
      121 ctgttcggcg taatagatgt cctggacgac atgctggaac agctcgtcca tcgtggtgat
      181 ttctttcgtg aacagaccca tgaggcactc ctacgcgacg ttgaccctga acgctcaacg
      241 ccaggcctgc gcgccagttc cagccgagct tccggctgcg cgccttcgtt ccccctgtgg
      301 ctgggccggg aagtgtcctt attccgccgg cacggcgacg gccttggcta ccgtctcgga
      361 atgtgaatcg gccggaagga ggagacctgt aatggcgatc gtcagcgcca ggcccgagag
      421 gatcatgaac agccagaaga agtcgccggt gcgctcgtgc accagggcca cgaggggcag
      481 cccgagcgag ccgaggccca gcgacaggac gaacttggcg ccgaaggcgg tggcgcgcca
      541 tcgccccggc gtgtagcgga cgagcagcgc attctcgacc ggggtcgaga tgacgaccgt
      601 gcagaagacc agcatcatgg tgacgacgag gccgagctcc caggcgtagg caagaacgag
      661 aatcagcggg acttggacgg accacgagat cacatacgcc cacttgagcg gaaaccggtc
      721 ggcgacccag ccgccaagca gttgcgttgc cgcgctcagg gcgaagacca tggtgacaat
      781 cgccccgacc atgacggtgc tgccctgcgt gatcaggggc agccgctgct cgaacaactt
      841 gggcatcacg acggtgagcg cgtgccaggt caggccggcg cacagcatcg tgaccgacag
      901 gacgaagaag gcgcgaagca cggcttcgcg tgccggaccg tcctgcggct tgcggtcctg
      961 cgtcgccgcg acgacgaggc ctgcgcgaac ggcgagccag aggccgacgc ccagcacgat
     1021 gcacagcgtt ccggggacta tgaacgcggc gcgccagctc gccagcgccg tcaacgatgc
     1081 agcaacgagc gacgcggtgc ccacgccgat gctgccgaag aggccgttca ggccgagcgc
     1141 ccgcccgcga tgctcggcgt tcctcaccag ccaggcgagc ccgaccggat gatagatcgc
     1201 gccgaacagg ccaaccagcg tgaggccgat ggcaatgccc atgggcccgg tcgcaagccc
     1261 ggtgaggatc gccgcgagcc cgctgccgac ataaaagatc accatcatgt attcggcgct
     1321 ccagcgatcg ccgagccagc ccgcgggcag cgcgcagatg ccgtaaagaa acgctcccgg
     1381 caccgacaag gccagaagct cgccgtagct gaggttgaat tgccgctcga gcgtgagcac
     1441 caccgtcggg tacagcagca tcaacaggtg gctgaggagg tggcccacat tcgaaaaata
     1501 ttgcgcgaga tggcgggact ggtcgttcat cacagccggg acattcgcac ttgccttcaa
     1561 gccgggcaac ccgcgccaaa ctatcgttgg agtcgttgca cggttcaccc gggttccgtg
     1621 cacgaattgg cggaatgcgc cttcagccag aaatgctcgt gcttccgccc gg
//
LOCUS       DATAIQ010000278         1941 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_291736, whole genome shotgun sequence.
ACCESSION   DATAIQ010000278 DATAIQ010000000
VERSION     DATAIQ010000278.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1941)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1941)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1941
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_291736"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..378
                     /locus_tag="VHN20_04835"
     CDS             <1..378
                     /locus_tag="VHN20_04835"
                     /EC_number="2.3.1.286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016917776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Sir2 family NAD-dependent protein deacetylase"
                     /protein_id="HEX2725127.1"
                     /translation="LLKARCAACAAVVPWRGDLGVAETCGACGRAGSLRPDVVWFGEM
                     PMHMDDIHAALAETDLFVAIGTSGSVYPAAGFVDHARAAGVGTCEINLEPSDNARRFD
                     NGHYGPATEAVPQWVDEVLESVV"
     gene            complement(375..>1941)
                     /locus_tag="VHN20_04840"
     CDS             complement(375..>1941)
                     /locus_tag="VHN20_04840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017992821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HEX2725128.1"
                     /translation="EAWPGVQRAGQVIYELHVGTFTPEGTWAAAMEKLPLLEDVGITL
                     IEMMPVNEFPGRFGWGYDGVNLFAPTRLYGSPDDLRRFIDAAHGLGIGVILDVVYNHL
                     GPDGNYLACFSDDYFTDRYENEWGEAINFDSDGAAPVREFFTANAAYWIDEFHFDGLR
                     LDATQSMHDASDDHVITAIVLAARAAAGERSILVVAENEPQHTRLVRPAARGGYGVDA
                     LWNDDFHHSAVVALTGRNEAYYEDHQGSPQEFVSAAKYGYLFQGQHYAHQGKRRGMPG
                     LDLPPAAYITFIENHDQVANSPAGLRLHRLTSPGRLRAVTALFLLMPGTPMLFQGQEF
                     AASAPFLYFADHNPELAHLVREGRHAFLRQFPSVDSSALRLADPGAVETFDACKLDWS
                     ELDANKHAVALHRDLLRLRREDAVFAAQSALDGAVLGSDAFVLRFFGRDGDDRLLFVN
                     LGRDLTCRSIADPLVAPPADRVWQTLWASEHPDYGGGGIPEIETRTGWRIPGHAAVVL
                     AAAREAAPSGGTD"
BASE COUNT          314 a          628 c          695 g          304 t
ORIGIN      
        1 ttgctcaagg cgcgctgcgc cgcctgcgcc gcggtggtac cgtggcgcgg cgaccttggc
       61 gtcgccgaga cttgcggcgc gtgcgggcgg gccggatcgc tacggcccga tgtggtgtgg
      121 ttcggcgaga tgccgatgca tatggatgac atccatgcgg cgctcgccga gacggacctt
      181 ttcgtcgcca tcggcacctc cggatcggtc tatcccgccg ccggatttgt cgaccacgcg
      241 cgcgccgccg gcgtggggac ctgcgagatc aacctcgagc cttccgacaa cgcaaggcgc
      301 ttcgacaatg ggcactacgg ccccgcgacc gaggcggtcc cgcaatgggt cgacgaggtg
      361 ctggagagcg tagtttagtc ggtgcctccg gagggggctg cttcgcgggc ggcagcaagc
      421 acgaccgctg cgtgacccgg gatgcgccag ccggtcctgg tctcgatttc cgggatgccg
      481 ccgccgccgt aatcgggatg ctcactcgcc cacaacgtct gccagacccg atccgcgggc
      541 ggcgccacga gcggatcggc gatgctgcgg caggtcaggt cccggccgag attgacgaac
      601 aggagccggt cgtcgccgtc acggccgaag aagcgcagca cgaaggcgtc cgatccgagc
      661 accgcgccgt cgagcgcgct ctgcgcggcg aaaacggcgt cctcgcgccg cagccgcagc
      721 aggtcgcggt gcagggcgac cgcgtgcttg ttggcatcga gctcggacca gtcgagcttg
      781 caggcgtcga aggtctcgac agcgccgggg tccgccaggc gcaatgcgct cgaatcaacg
      841 ctcggaaact gtctgaggaa ggcgtgcctg ccctcccgca ccaggtgcgc gagctccggg
      901 ttgtgatcgg cgaaatacag gaaaggcgcg gatgccgcga actcctgccc ctggaacagc
      961 atcggcgtgc cgggcatcag caggaagagc gccgtcacgg cgcgcagccg ccccgggctg
     1021 gtcaagcggt gcagccgaag ccctgccggc gagttggcga cctggtcgtg attctcgatg
     1081 aaagtgatgt aggcggcggg cggcaaatcg agcccgggca tgccgcgccg cttgccctga
     1141 tgggcgtagt gctggccctg gaaaagatat ccgtatttgg cggccgagac gaattcctgc
     1201 ggcgagccct ggtgatcctc gtaataggcc tcgttgcggc cggtgagcgc cacgacggcg
     1261 gagtggtgga agtcgtcgtt ccaaagggcg tcgacgccgt agccgccgcg cgccgccggg
     1321 cgcacgagcc gcgtgtgctg cggctcgttc tcggcgacga ccaggatgga gcgctcgccg
     1381 gcggcggcgc gcgccgcgag cacgatcgcg gtgatgacgt gatcgtcgga ggcgtcgtgc
     1441 atgctctgcg tcgcgtcgag gcgcaggccg tcgaaatgga actcatcgat ccagtaggcc
     1501 gcgttcgcgg tgaagaactc gcgcaccggc gcggcgccgt cgctgtcgaa gttgatcgct
     1561 tcgccccatt cgttctcgta acggtcggtg aaatagtcgt cggagaaaca ggcgaggtaa
     1621 ttcccgtccg ggccgagatg gttgtagacg acgtcgagga tcacgccgat cccgaggccg
     1681 tgcgcagcgt cgatgaagcg acggaggtcg tcgggcgagc cgtagagccg cgtcggcgcg
     1741 aacaggttga caccatcgta accccagccg aatcggccgg ggaactcgtt gacgggcatc
     1801 atctcgatca acgtgatgcc cacatcctcg agcagcggca gcttctccat ggctgccgcc
     1861 cacgttcctt cgggcgtgaa cgtgccaacg tggagttcgt agatcacctg gccggcacgc
     1921 tgcacgcccg gccaggcctc g
//
LOCUS       DATAIQ010000279         1603 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_429739, whole genome shotgun sequence.
ACCESSION   DATAIQ010000279 DATAIQ010000000
VERSION     DATAIQ010000279.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1603)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1603)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1603
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_429739"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..722)
                     /locus_tag="VHN20_04845"
     CDS             complement(<1..722)
                     /locus_tag="VHN20_04845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018387003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX2725129.1"
                     /translation="MTTTDVVLSLRGITKRFGALVANQNIDLDLRRGEILALLGENGA
                     GKTTLMNILFGHYVADEGSVHVASAAGVLEALAAGSPRAALAAGIGMVHQHFALAESL
                     TVLENIVLGTGSLAAFRLNLRRARAKLERLMHESGLVVRANAKVFELSVGEKQRVEIL
                     KVLFRDARILVLDEPTAVLTPQEIEGLFAVLRRLAERGFAIVFISHKLGEVVALADRV
                     AVLRHGRKVADQPVAGADRNTLA"
     gene            complement(834..>1603)
                     /locus_tag="VHN20_04850"
     CDS             complement(834..>1603)
                     /locus_tag="VHN20_04850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="BMP family protein"
                     /protein_id="HEX2725130.1"
                     /translation="DYERIMRQYAEEGNDLVIGEIFGVERAARRVAANYPKVAFLMGS
                     SFGPTKPNLAVFDNFIHEPSYLTGMVAGKATKSNLIGMVGGYAIPEVNRLMNAFMDGA
                     RAVNPNVKFLVTFINSWYDPPKAKEASFAMIDRGADVMYAERFGVSDAAKERKVKVIG
                     NVIDTASQYPDTVLASALWHMEPTIDRALKAVAEGRFEAADYGQYSYMQYGGASLAVD
                     DKLVAADVVKLVREKEKEITDGLFRVNVNDAEPKATA"
BASE COUNT          254 a          520 c          557 g          272 t
ORIGIN      
        1 gcgagcgtgt tgcggtcggc gccggcgacc ggctggtccg cgaccttgcg gccgtggcgc
       61 agcacggcga cgcgatcggc cagcgcgacc acctcgccga gcttgtggga gatgaagacg
      121 atggcgaagc cgcgctccgc aagccgccgc agcacggcga acaggccctc gatctcctgc
      181 ggcgtcagca ccgccgtcgg ctcgtcgagg acgaggatgc gcgcgtcgcg gaacagcact
      241 ttcaggatct cgacgcgctg cttttcgccg accgacagct cgaacacctt tgcgttcgcg
      301 cgcaccacga gcccgctctc gtgcatcagc cgctcgagct tggcgcgggc gcgccgcagg
      361 ttgagccgga aagcagcaag cgagcccgtg ccgagcacga tgttctcgag cacggtgagg
      421 ctctcggcca gcgcgaagtg ctgatgcacc atgccgatgc cggccgcgag cgccgcgcgc
      481 ggcgagccgg ccgcgagcgc ctcgagtacg ccggcggctg atgcgacgtg gacgctgcct
      541 tcgtcggcga cgtaatggcc gaacaggatg ttcatcagcg tcgtcttgcc ggcgccgttc
      601 tcgccgagca gcgcgaggat ctcgccgcgc cgaaggtcga gatcgatgtt ttggttggcg
      661 accagcgcgc cgaagcgctt ggtgatgccg cgcagcgaga ggacgacgtc ggtcgtggtc
      721 atgacgaaag gaggatcgat gaaaaatcgc aaatgatgcg gcgagcgcgg cggaagatgg
      781 ggaggcgcgg ggcggagggt cgtggccccc tgccctcgcg ccggcgattg ccgctaggcc
      841 gtcgctttgg gctcggcgtc gttgacgttg acgcggaaca ggccgtcggt gatctccttt
      901 tccttctcgc gcaccagctt cacgacgtcg gccgcgacca gcttatcgtc cacggcgagg
      961 ctcgcgccgc cgtattgcat gtagctgtac tggccgtaat cggccgcctc gaagcggccc
     1021 tcggccaccg ccttgagggc gcggtcgatg gtcggctcca tgtgccagag cgcgctcgcc
     1081 agcacggtgt cgggatactg cgaggcggtg tcgatgacgt tgccgatcac cttgaccttg
     1141 cgctccttgg cggcgtcgga cacgccgaag cgctcggcat acatgacgtc ggcgccgcga
     1201 tcgatcatcg cgaaggacgc ctccttggcc ttcggcgggt cgtaccagga gttgatgaag
     1261 gtgacgagga acttcacgtt cgggttgacc gcgcgcgcgc cgtccatgaa cgcgttcatg
     1321 agccggttga cctcggggat cgcgtagccg ccgaccatgc cgatcaggtt cgatttggtc
     1381 gccttaccgg cgaccatgcc cgtcagatac gagggctcgt ggatgaagtt gtcgaagacg
     1441 gccaggttcg gcttggtcgg cccgaatgac gagcccatca ggaacgccac cttcgggtaa
     1501 ttcgccgcca cccggcgcgc cgcgcgctcg acgccaaaaa tctcgccgat gacgaggtcg
     1561 ttaccttcct cggcgtattg gcgcatgatg cgctcgtaat cgt
//
LOCUS       DATAIQ010000280         3101 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_429751, whole genome shotgun sequence.
ACCESSION   DATAIQ010000280 DATAIQ010000000
VERSION     DATAIQ010000280.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3101)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3101)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3101
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_429751"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..629
                     /locus_tag="VHN20_04855"
     CDS             <1..629
                     /locus_tag="VHN20_04855"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX2725131.1"
                     /translation="GSLFRHVAYTLYRVLLGFGLAVVVSIPLGILMARFRPVERFVLP
                     LVNALMPIPSFALVPVFMLWFGIGNTTTILIVFYAASFPMVLNAWSGVRSVNPLWLRA
                     AGAMGAGERALFWNVMLPGASPFIITGLRQAFIRAWIAVVGAEMIAASDWGLGWVIFD
                     AKEFLNADVMLASLIVIGLIGILFERLVFGSLENATVLRWGMMRVAKE"
     gene            644..1426
                     /locus_tag="VHN20_04860"
     CDS             644..1426
                     /locus_tag="VHN20_04860"
                     /EC_number="7.6.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016840147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2725132.1"
                     /translation="MLGIEARDVGLVYNTPAGTVTAVEGVTFTMRPSEFLCLVGPSGC
                     GKSTMLNIIAGFLTPSSGEIRIDGKPVKGYGQDRGVVFQDFAQLFPWRTALGNVTFGL
                     EMKGVAKAERERIALEQLRLVKLEKFARSYPHHLSGGMQQRVAIARALAYDPAVLLMD
                     EPFAALDAFTRDEMQKLVADVWRETRKTVIYVTHNVAEAVYLADRVLVMTPHPGRVKA
                     EIAVRLPRPRDPLSMEFLEYQKELLGQLGHGPAGHDNEGVKR"
     gene            1423..2421
                     /locus_tag="VHN20_04865"
     CDS             1423..2421
                     /locus_tag="VHN20_04865"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX2725133.1"
                     /translation="MKVLHMPMTRRRHLAVLGAGAVAAVSGRPARAETATIHQGYQTN
                     IWGMPTYYLLQSGALQKQGIKFEEFAVPSGNLTMQQMVARQVDLGTYAGQSFILGADR
                     GDLVGIANIEHVGRTVRVMARKDLNLKSVADLRGKKIANQTGSSIATVFVDKIAPAAG
                     LKKGDYQEIRMNVDDMVAALAAKTVDAMVNVEPYNAIAEGDGIATTIVDSWDVDRMPV
                     LMAATPDFVDKHPDVVVAYLKAWIDVGRDFKDNPDKVAEVIYGFYTGKGYTMSKDAFR
                     QALAKVEVNPVSPAELKPYLQKEAEALIEAKRIKAAPDWGKALRPEFMAKAQGKVG"
     gene            2418..>3101
                     /locus_tag="VHN20_04870"
     CDS             2418..>3101
                     /locus_tag="VHN20_04870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725134.1"
                     /translation="MSAQVVAAALTDILLIPYGVAEWSPDGLAVDGLSARTLRLRTAF
                     PCAAINRAAREPLRFNTSRYEAGFAPTAQAGAADDATLVKDYLTGLCRPWDKLAVQFL
                     DAYFRFASDLIEEHRDVLSARLAPFAGLYKPADWLFSAPKPLPRAHLHAPQESGAASA
                     AAISTADFVRVDFAFWLGDRLVAAQSSQSALTPKKAKEQADRLRVAGIETITFAAGDL
                     TGAKARDLFT"
BASE COUNT          497 a         1085 c         1010 g          509 t
ORIGIN      
        1 atggcagcct ctttcggcac gtcgcctaca cgctctaccg cgtgctcctc ggtttcggcc
       61 tcgcggtcgt ggtctcgatc ccgctcggta tcctgatggc gcgcttccgg ccggtggagc
      121 gcttcgtcct gccgctcgtc aacgcgctca tgccgatccc ctccttcgcg ctggtgccgg
      181 tcttcatgct gtggttcggc atcggcaaca cgacgacgat cctcatcgtc ttctacgcag
      241 cgagctttcc gatggtgctc aacgcgtggt cgggcgtgcg ctcggtcaat ccgctgtggc
      301 tgcgcgccgc gggagccatg ggcgcgggcg agcgcgcgct gttctggaac gtcatgctgc
      361 ctggcgcctc gccattcatc atcaccggcc tgcgccaggc cttcatccgc gcctggatcg
      421 cggtggtcgg cgccgagatg atcgccgcct ccgactgggg cctcggctgg gtcatcttcg
      481 acgccaagga gttcctgaat gccgacgtca tgctggcttc gctgatcgtc atcgggctga
      541 tcggcatcct gttcgaacgg ctggtgttcg gctcgctcga gaatgccacg gtccttcgct
      601 ggggcatgat gcgcgtggcg aaggaataag gggctctcca aagatgctcg gcatcgaagc
      661 ccgcgacgtc gggctggtct acaacacgcc cgccggcacg gtgacggccg tcgagggcgt
      721 caccttcacg atgcggccgt ccgagttcct gtgcctcgtc ggcccgagcg gctgcggcaa
      781 gtcgaccatg ctcaacatca tcgccggctt cctgacgccc tcgtccggcg agatccgcat
      841 cgacggcaag ccggtcaagg gctacggcca ggaccgaggc gtggtgttcc aggatttcgc
      901 gcagctgttt ccctggcgca cggcgctcgg caacgtgacc ttcgggctcg agatgaaggg
      961 cgtcgccaag gccgagcgcg agcgcatcgc gctcgagcag ctgcgcctcg tgaagctgga
     1021 gaaattcgcg cgctcctacc cgcaccacct gtcgggcggg atgcagcagc gcgtcgccat
     1081 cgcccgcgcc ctcgcctacg atccggcggt gctgctgatg gacgagccct tcgcggcgct
     1141 cgacgccttc acgcgcgacg agatgcagaa gctggtcgcg gacgtgtggc gcgagacgcg
     1201 caagaccgtg atctacgtga cccacaacgt cgccgaagcc gtctatctcg ccgaccgagt
     1261 gctggtgatg acgccccatc ccgggcgcgt gaaggccgag atcgcggttc gcttgccacg
     1321 gccgcgcgat ccgctcagca tggaattcct ggaataccag aaggaactgc tcgggcagct
     1381 cggccacggc ccagccgggc acgacaacga gggagtgaag cgatgaaggt cctgcacatg
     1441 ccgatgaccc gccggcggca tctggcggtc ctgggcgccg gcgccgtggc ggccgtctcg
     1501 ggccgcccgg cccgcgctga gacggcgacc atccaccagg gctaccagac caatatctgg
     1561 ggcatgccga cctattacct cctgcagtcc ggcgcgctgc agaagcaggg catcaagttc
     1621 gaggaattcg ccgtcccgtc gggcaacctc accatgcagc agatggtggc gcgccaggtc
     1681 gacctcggca cctatgcggg gcagtccttc atcctcggcg ccgaccgcgg cgacctcgtc
     1741 ggcatcgcca atatcgagca tgtcggccgg acggtgcgcg tgatggcgcg caaggacctg
     1801 aacctgaaga gcgtcgccga cctccgcggc aagaagatcg ccaaccagac cggatcgtcg
     1861 atcgccaccg tattcgtcga caagatcgcg ccggcggccg ggctcaagaa gggcgactac
     1921 caggagatcc gcatgaacgt cgacgacatg gtcgcggcgc tcgccgccaa gaccgtcgac
     1981 gccatggtca atgtcgagcc ctacaacgcc atcgccgagg gcgacggcat cgccaccacg
     2041 atcgtcgact cctgggacgt cgaccgcatg ccggtgctga tggcggcgac gcccgacttc
     2101 gtcgacaagc atcccgacgt cgtcgtcgcc tatctgaagg catggatcga cgtcggtcgc
     2161 gacttcaagg acaaccccga caaggtcgcc gaggtaatct acggcttcta cacgggcaag
     2221 ggctacacga tgtccaagga cgccttccgc caggcgctcg ccaaggtcga ggtcaacccc
     2281 gtctcgcccg ccgagctgaa gccttacctg cagaaggaag ccgaggcgct gatcgaggcc
     2341 aagcgcatca aggcggcgcc ggactggggc aaggccctgc gccccgaatt catggccaag
     2401 gcccaaggca aggtggggtg agcgcacaag tagtggccgc cgctctcacc gacatccttc
     2461 tcatccctta cggcgtcgcc gaatggtcgc cggacgggct cgccgtcgac ggcttgtccg
     2521 cgcgcacgct gcggctgcgg acggcgttcc cgtgcgccgc catcaaccgc gccgcacgcg
     2581 agccgctgcg cttcaacacg agccgctacg aagctggctt cgcgccgacg gcgcaggcgg
     2641 gcgcggccga cgacgccacg ctcgtcaagg attacctcac gggcctgtgc cggccgtggg
     2701 acaagctcgc ggtgcagttc ctcgacgcct acttccgctt cgcgtccgat ctgatcgagg
     2761 agcaccgtga cgtgctgtcc gcgcggctcg caccgttcgc cggtctctac aagcctgccg
     2821 actggctgtt ctccgcgcca aagccgctgc cgcgcgcgca tctccatgcg ccgcaggaga
     2881 gcggcgctgc gagtgcggcg gcgatcagca ccgccgattt cgtgcgcgtc gatttcgcct
     2941 tctggctcgg cgaccggctg gtggcggcgc aatcctcgca atcggcgctg acgccgaaga
     3001 aggcgaagga gcaggccgac cgcctccgcg tcgccggcat cgagacgatt accttcgctg
     3061 cgggcgatct gaccggtgcc aaggcccgcg acctgttcac c
//
LOCUS       DATAIQ010000281         4080 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_106783, whole genome shotgun sequence.
ACCESSION   DATAIQ010000281 DATAIQ010000000
VERSION     DATAIQ010000281.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4080)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4080)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4080
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_106783"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1020)
                     /locus_tag="VHN20_04875"
     CDS             complement(<1..1020)
                     /locus_tag="VHN20_04875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725135.1"
                     /translation="MRTRNSRSPWAVPVAAALAGTALLTQGATAQEKRTIDERKALYA
                     PWSPDQMAQRRKEQKLVGPGPAKPVPPPAFPSYLKKPTSVDELMPQARAASRQTGGRT
                     PLGLVESGKTVLIVIGEVRDAEPNMMVQEAMKRALEERGVKVHIKPTWELVGISDQEV
                     IATRKAVNQFTIADGQRELEYFFTGTGFMPNPQKGRDWIRAQDPDLYNATWPDAQFPN
                     ETAAKLARESLDVVGKGIQAFINKNPDVTWVFWRSGGRTDTRKALGKYQDKFLGNYTY
                     LDLYDLMSQVPAFPGDVWRLVETKTIEPLAYVDRVEVTDPEGTAFGYDVNEETAKRWA
                     EGVYQQ"
     gene            complement(1073..2893)
                     /locus_tag="VHN20_04880"
     CDS             complement(1073..2893)
                     /locus_tag="VHN20_04880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725136.1"
                     /translation="MFQGRRIGDVSSALCIMAAGALLCLPQQAFAQGAPSFEQRKADF
                     APWSPDQMTQRRKEQGLLGPGTKKPFPAPAFPSYLKKPNSVDELMPQARAAARQTGGR
                     TPLGLALPGKTMLIIVGEVRDAKPNFMVQEAIKRALEERGVKVQMVTTWDLLGISEQQ
                     FQEVRNALREFTISDGQRELESFFTSTGQMIDPQKGRDWVREKDADLYKATWPEFKIT
                     DARIAKIAQDYQIEVPKAVVAYIDKHPEIDWIMWRGANRPNTRKALAHHGEKFLGNYT
                     YLDLYDLMSQVPSFPADVWRLIETKTIEPLAFVDRAEVTDPEGTAFGYDVPEDGAKRW
                     AEGVYNQGHLYMFPAQATGRFPYSIIEYPTMRSDYQKPLQAEVSGVIASTTSHAATHP
                     RIEIQVTKGRIASIKGGGLYGEGMRLLQDYPGTKDLTWPFQEKPGYWWLYEAGMGTNP
                     KYFKHPAEVAEGINLSERNVAGVVHWAFGAEASMGPDKIGEWADQSKAFSGKHTLPMG
                     HSLHHHNLFPTMQVRIRDLDQWITLVEHGGLTAFDDVYVRALASRYGNPNDILRRDYV
                     TAIPGINAPGSYEAYARNPGAYWLKWAESVEAGKYEYFKP"
     gene            complement(2973..>4080)
                     /locus_tag="VHN20_04885"
     CDS             complement(2973..>4080)
                     /locus_tag="VHN20_04885"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEX2725137.1"
                     /translation="LRARPDNERAKEPGGEDVMRGCSFVVAAATILGSMPAWADPIAD
                     FYAGKRIDFVIRSGVGGGYDSYSRLLARHIRKHIPGNPQVVPVNMPGGGGIVAANYLA
                     YKAPKDGTVLSIVGQGLVVDQALGLNESFKADLREFNWIGNLSATNQVLVAWHTSPTR
                     TLKDATARETVIGATGAGSISVQVPALLNNLLGTRFKIVQGYPGGEEINLAMERGELE
                     GRATNPWVSYKATEPRLVTEKLIRPLVQIGMRKEHDLPDVPLLRELAQKPEHQPILDF
                     ISEAVVVGRPIATTPGVPKERIAALREAFEKTLKDPEFLKDAENQRAEIDPMTGTELA
                     ALIDKLINPPADTRAKVKAAIEPGKVHNAPGSKN"
BASE COUNT          606 a         1329 c         1335 g          810 t
ORIGIN      
        1 ctgctggtag acgccttccg cccaccgctt ggcggtctcc tcgttgacgt cgtagccgaa
       61 ggccgtgcct tccgggtcgg taacctcgac gcggtcgaca taggcgagcg gctcgatcgt
      121 cttggtctcg accagccgcc acacgtcgcc cgggaaggcg ggtacctggc tcatcaggtc
      181 gtagagatcg agataggtgt agttgccgag gaacttgtcc tggtacttgc caagcgcctt
      241 gcgggtgtcc gtccgcccgc cgctgcgcca gaacacccag gtcacgtccg ggttcttgtt
      301 gatgaaggcc tggatgccct taccgaccac gtcgagcgac tcccgggcga gcttcgccgc
      361 ggtctcgttc ggaaactgcg cgtcgggcca agtcgcattg tagaggtccg gatcctgcgc
      421 ccggatccag tcgcggcctt tctgcgggtt tggcatgaag ccggtgccgg tgaagaaata
      481 ctcaagctcg cgctgcccgt cggcgatcgt gaactggttg accgccttgc gcgtcgcgat
      541 cacctcctgg tcactgatgc cgacgagctc ccaggtcggc tttatgtgga ccttcacgcc
      601 gcgctcctcg agcgcacgct tcatcgcttc ctgaaccatc atgttgggct cggcatcgcg
      661 cacctcgccg atcacgatca gcaccgtctt gccggactcg acgaggccga gcggcgtgcg
      721 cccccccgtc tgccgagacg cggcgcgcgc ctgcggcatc agctcatcaa ccgaggttgg
      781 cttcttcaga tacgacggaa aagccggcgg cggcaccggc ttggccggtc ccggcccaac
      841 cagcttctgc tccttgcgcc gctgcgccat ctgatccggc gaccaaggtg catacagcgc
      901 tttgcgctcg tcgatggtgc gcttctcctg agcggtggcg ccttgcgtca gcagcgccgt
      961 gcctgcgagc gcggccgcga cgggaacagc ccacgggctg cgagaattcc tggttctcat
     1021 gactcctccc tgttctcgtt ccgcgcgcgc aaggcgcggg tcgttgatgc acctatggct
     1081 tgaaatattc gtatttgcca gcctcgacac tttcggccca tttgagccag taggcgcccg
     1141 gattgcgcgc atacgcctcg tagctgccag gcgcgttgat gccggggatg gccgtcacgt
     1201 agtcgcggcg caggatgtcg ttggggttgc cgtagcgcga cgccagggcg cgcacataga
     1261 cgtcgtcgaa cgccgtgagg ccgccatgct cgacgagcgt gatccactgg tcgagatcgc
     1321 ggatgcgcac ctgcatcgtc gggaacaggt tgtgatgatg cagcgagtgc cccatcggca
     1381 gtgtgtgctt gcccgagaac gccttgctct ggtccgccca ttcaccgatc ttgtccggcc
     1441 ccatcgaggc ctcggccccg aacgcccagt gtacgacgcc ggcgacgttg cgctccgaca
     1501 ggttgatgcc ttccgccacc tcggccgggt gcttgaagta tttggggttg gtgcccatcc
     1561 cggcttcgta gagccaccag tagcccggct tctcctggaa cggccaggtg agatccttcg
     1621 tgcccggata atcctgcaac aggcgcatgc cctcgccgta aaggccgcca cccttgatgc
     1681 tcgcgatgcg ccctttcgtg acctggatct cgatgcgcgg atgcgtggca gcgtggctag
     1741 ttgtcgacgc gatcacgccg ctcacctcgg cctgaagcgg cttctgataa tcggaccgca
     1801 tggtcgggta ttcgatgatc gagtagggga agcgcccggt tgcctgggca gggaacatgt
     1861 agaggtggcc ctggttgtag acgccttccg cccagcgctt ggccccgtcc tcgggcacat
     1921 cgtagccgaa cgccgtcccc tcgggatcgg tgacctcggc gcggtcgacg aaggcgagcg
     1981 gctcgatggt cttggtctcg atcaaccgcc acacgtcggc cgggaaggac ggcacctggc
     2041 tcatcaggtc gtaaaggtcg agataggtgt agttgccgag aaacttctca ccgtgatggg
     2101 cgagcgcctt gcgcgtgttc ggccggttgg caccgcgcca catgatccag tcgatctcgg
     2161 gatgcttgtc gatataggcg acgaccgcct tgggcacctc gatctggtag tcctgggcga
     2221 tcttggcgat gcgcgcgtcg gtgatcttga actccggcca ggtcgccttg tagaggtccg
     2281 cgtctttctc gcggacccag tcgcggccct tttgcgggtc gatcatctgc cccgtgctcg
     2341 tgaagaacga ttcgagctcg cgctggccgt cgctgatcgt aaactcgcgc agggcgttgc
     2401 gtacctcctg gaactgctgc tcggaaatcc cgagcaggtc ccacgtggtg accatctgca
     2461 ccttgacgcc gcgctcctcg agggcgcgct tgatcgcctc ctgaaccatg aagttcggct
     2521 tggcgtcgcg cacctcgccg acgatgatca gcatggtctt gcccggaagg gcgagcccga
     2581 gcggcgtgcg cccgccggtc tgtcgtgccg cggcgcgggc ctgcggcatc agttcgtcca
     2641 cagagttggg cttcttgagg taggacggga acgcgggcgc cgggaacggc ttctttgtgc
     2701 ccgggccgag caggccctgt tccttgcgcc gctgcgtcat ctggtccggc gaccagggtg
     2761 cgaaatcggc tttgcgctgc tcgaagctcg gcgcgccttg cgcgaaggcc tgctgtggca
     2821 ggcacaagag cgctcccgca gccatgatgc acagcgcaga tgacacgtcg ccgatccggc
     2881 gtccctggaa catcgcatcc tccctatttt cattgtcatt gccgggcttg cggctggcgc
     2941 tgtatcggtg gctccagctc aagcactcag cgtcagttct tgctgcccgg ggcgttgtgc
     3001 accttgcccg gctcgatcgc cgccttgacc ttggcgcgag tgtcggccgg ggggttgatc
     3061 agcttgtcga tgagcgcggc cagctcggtg cccgtcatcg ggtcaatctc ggcgcgctgg
     3121 ttctccgcgt ccttcaggaa ctcgggatcc ttgagggtct tctcgaaagc ttctcgcaag
     3181 gcggcgatcc gctccttggg gacgccggga gtggtcgcga tcggccggcc cacgacgacc
     3241 gcctccgaga tgaagtcgag gatcggctgg tgctcgggct tctgcgcgag ctcgcgcaac
     3301 agcggcacgt ccggcaggtc gtgctccttg cgcatgccga tctgcaccag gggtcggatg
     3361 agcttctcgg tgacgaggcg cggttctgtt gccttgtagc tgacccaggg gttggtggcg
     3421 cgcccttcga gttcgccgcg ctccatggcg aggttgatct cctcgccgcc gggatagccc
     3481 tgcacgatct tgaacctggt gccgagaagg ttgttgagca acgcaggaac ctgcaccgaa
     3541 atggaccccg cgccggtggc accgatcacc gtctcgcgcg ccgttgcatc cttcagcgtc
     3601 ctggtcggcg aggtgtgcca ggccacgagc acctggttgg tggcgctcag gttgccgatc
     3661 cagttgaact cgcgcaaatc cgccttgaac gattcattca gaccgagcgc ctggtcgacg
     3721 acgaggccct ggccgacgat gctgaggaca gtgccgtcct tcggtgcctt gtaggcgagg
     3781 tagttggcgg ccacgatgcc gccgccgccg ggcatgttga cgggcacgac ctgcgggttg
     3841 cccggaatat gcttgcgaat gtgccgggcc aggaggcgcg agtaggaatc gtagccgccg
     3901 ccgacccccg agcggatcac gaagtcgatg cgcttgccgg catagaaatc ggcgataggg
     3961 tcggcccaag ccggcatcga ccccagaatg gtcgccgcgg ccacgacgaa gctgcacccc
     4021 cgcatgacat cctccccgcc aggttctttg gcccgttcgt tgtcgggcct tgcgcgcaaa
//
LOCUS       DATAIQ010000282         1525 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_329518, whole genome shotgun sequence.
ACCESSION   DATAIQ010000282 DATAIQ010000000
VERSION     DATAIQ010000282.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1525)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1525)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1525
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_329518"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..420)
                     /locus_tag="VHN20_04890"
     CDS             complement(<1..420)
                     /locus_tag="VHN20_04890"
                     /inference="COORDINATES: protein motif:HMM:NF014631.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:1990397 - queuosine salvage [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="queuosine precursor transporter"
                     /protein_id="HEX2725138.1"
                     /translation="MDNAETRTQPPLARSLFAFAIFYGGMVCIAGVLGNKQVALGPLA
                     VEAGIFAFLMLVVTSSAVAELHGRATANRLVLWGFVPLLFSLALTLLVLAVPAADKMD
                     PERLAAFDMMMKATPRIWLAGIIAYGISQMLNVTIFSW"
     gene            502..>1525
                     /locus_tag="VHN20_04895"
     CDS             502..>1525
                     /locus_tag="VHN20_04895"
                     /inference="COORDINATES: protein motif:HMM:NF012515.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosine kinase"
                     /protein_id="HEX2725139.1"
                     /translation="MTRPKFDITAIGDAIVDVIATCDDAFLVEHRLPKGSMQLLAPDE
                     AERLYEAMGSAQETSGGSAANSMAGIAALGGRAAFIGQVADDQLGAIFRHDMTALGVA
                     FDTPALNGSGPPTGRCLILVTPDAQRTMNTCPGASHELTADSLDEALIADSAILYLEG
                     YLWGPEKPRSAMHRAVEVAHGAGREIAFTLSESVCIAGRREGFERMIADGGIDLLFAN
                     EHEAMQLTGTPSLEAAVGALRGRVPTLVVTRGPKGAMGIVEGETVEVPAAPVDKVVDT
                     TGAGDLFAAAYVWADLRGASALERLGWSVMYASLSVGVSTAIAGAATLEALAAAGERF
                     GLGSPGF"
BASE COUNT          242 a          521 c          545 g          217 t
ORIGIN      
        1 ccacgagaag atggtgacgt tgagcatctg cgagatgccg taagcgatga tcccggcgag
       61 ccagattcgc ggagtcgcct tcatcatcat atcgaacgcc gcgagccgtt cggggtccat
      121 cttgtcggcc gccggaacag ccaggaccag cagggtcaga gctagcgaga acagcagcgg
      181 cacgaagccc cacagcacca gccggttggc ggtcgcccgg ccgtgaagct cggccaccgc
      241 gctcgacgtc acgaccagca tcaggaaagc gaagatcccg gcctcgacgg caagcgggcc
      301 gagtgcgacc tgcttgttgc cgagcacccc ggcgatgcac accatgccgc catagaagat
      361 ggcgaaggcg aacagcgagc gggcgagcgg tggctgcgtg cgggtttcgg cgttgtccat
      421 ttccgcaggc ctagccgctc gcacccgcgc cgcaagcctt ttgttgaccg gccccggcac
      481 cgccgctagc gcgcgctcgc tgtgacccgc cccaagttcg acatcaccgc catcggcgat
      541 gccatcgtcg acgtcatcgc gacctgcgac gacgccttcc tcgtcgagca ccggctgccc
      601 aagggctcca tgcaattgct cgcgcccgac gaggccgagc ggctctacga ggcgatgggc
      661 agcgcccagg aaacgtccgg agggtcggcg gccaattcga tggccgggat cgccgcattg
      721 ggcggccgcg ccgcgttcat cggccaagtc gccgacgacc aattgggcgc gatcttccgc
      781 cacgacatga cggcgctcgg ggtcgcgttc gacacgcccg cgctgaacgg cagcggacca
      841 ccgaccggcc gctgcctgat cctcgtcacg cccgatgcgc agcggacgat gaacacctgc
      901 cccggcgcaa gccatgagct gaccgcggat tcgcttgacg aggcgctgat cgcggacagc
      961 gcaatcctct atctcgaagg ctatctgtgg ggacccgaaa agccgcgctc ggcgatgcac
     1021 cgggcggtcg aggtcgccca cggcgcgggt cgcgagatcg ccttcaccct gtccgaaagc
     1081 gtgtgcatcg ccggccgccg cgagggcttc gagcggatga tcgccgacgg cgggatcgac
     1141 ctgctgtttg ccaatgagca cgaggcgatg cagctgaccg gcacgccgag cctcgaggcg
     1201 gcggtggggg cgctgcgcgg ccgggtgccg accctggtcg tcacgcgcgg gccaaagggc
     1261 gcgatgggga tcgtcgaggg tgagacggtt gaggtgccgg cggcgccggt cgacaaggtg
     1321 gtcgacacga ccggcgccgg cgacctgttc gccgccgcct acgtgtgggc ggacctgcgc
     1381 ggcgcctccg cgctggagcg gctgggctgg tcggtgatgt acgcgtcgct ctcggtgggg
     1441 gtctccacgg ccatcgccgg cgccgcgacg ctggaggcgc tcgccgcggc gggcgagcgc
     1501 ttcggattgg ggtcgccggg gttcg
//
LOCUS       DATAIQ010000283         2456 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_106854, whole genome shotgun sequence.
ACCESSION   DATAIQ010000283 DATAIQ010000000
VERSION     DATAIQ010000283.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2456)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2456)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2456
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_106854"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2063)
                     /locus_tag="VHN20_04900"
     CDS             complement(<1..2063)
                     /locus_tag="VHN20_04900"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEX2725140.1"
                     /translation="MSSTVLDRRSFLKTTGSFALAFSLSGIPAVGQSQAPRLPGSLSS
                     NRKLDAWIRINADGTVTLLTGKVELGQGILTAFTQLCADELEVDIGRVRIVSGDTALC
                     PNEGTTAGSFSMPNGGTAVRFAAAEVRHILVQMAAERLGVPADRLDVKDGTIAERGGS
                     RSTTYWELLGGRHIERDATASIKPKPVEQRRYIGQSVPRIDLPAKVTGEPAFVQDLRP
                     DGLVHGRVVRQPTYDARLVGVDTAAVEAMPGVIRVVRNGDFLAVVAEKEWQAIAAAKA
                     LRETARWEEGQTLPTHAGIYDWLLAQKARDIVIKSDARGDGTAATRVVEATYRRPYQM
                     HASIGPSAAIAEMRDDVLIVDTHSQSVFETATAIANMIGLQPAKVRCRHRDGAGCYGH
                     NGADDAAADAALLARELPGRPVRVQWMREDEHAWEPYGSAMVLKVKAGLDGKGDVLDW
                     DYQLWSTPHGTRPGGNPGNLLTGRTLANAFPMPEPQNGGPPNFAADRNAIALYGFPGH
                     KVTTHFITAMPLRVSSHRGLGAYANVFAIESFMDELALAAGADPLEYRLRQTPDERGR
                     AVMRKAAERFGWASFSKSPGRGRGIAYARYKTIATYCAVCLEVEVDRQSGAVKVVRAV
                     VAGDAGEVVSPDGVANQLEGGLIQSLSWTLKEEVRFDDRRVQSRDWESYPILTFSEVP
                     PVEVEL"
     gene            complement(2060..>2456)
                     /locus_tag="VHN20_04905"
     CDS             complement(2060..>2456)
                     /locus_tag="VHN20_04905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEX2725141.1"
                     /translation="VLRDELRLDGVRFGCGLGQCGACTVLVDGTPVRSCSLPVKGVAG
                     KPVTTLEGMRKPNGDLHPLQKALLAEQAGQCGYCLPGMVMSAAALLAETPNPSDADIR
                     SSLDGNLCRCGSHNRIVRAVKRAAAEMVR"
BASE COUNT          348 a          853 c          883 g          372 t
ORIGIN      
        1 agctcgacct ccaccggggg cacctccgag aaggtcagga tcgggtagct ctcccagtcg
       61 cgcgactgga cgcggcgatc gtcgaaacgc acctcctcct tcagggtcca gctgagcgac
      121 tggatcagcc cgccttcgag ctggttggcg accccgtccg ggctgaccac ctcgccggca
      181 tcgccggcca cgaccgccct gaccaccttg acggcgccgg actgccggtc gacctcgacc
      241 tcgaggcaga cggcgcaata ggtggcgatg gtcttgtagc gcgcgtaagc gatgccgcga
      301 ccgcggccgg gcgatttcga aaagcttgcc cagccgaaac gctcggccgc cttgcgcatc
      361 acggcccgcc cgcgctcgtc cggcgtctgc cgcaggcggt attcgagcgg atcggctccg
      421 gccgccagcg ccagctcgtc catgaaggat tcgatcgcga agacgttggc gtaggcgccg
      481 aggccgcggt gcgaggacac gcgcagcggc atcgccgtga tgaagtgcgt ggtgaccttg
      541 tggccgggga acccgtacag cgcgatggcg ttgcggtccg cggcgaagtt cggcggcccg
      601 ccattctgcg gctcgggcat cggaaaggcg ttggccagcg tacgcccggt gagaaggttt
      661 cccgggttgc cgcccggccg cgtgccatgc ggcgtcgacc acagctggta atcccagtcg
      721 aggacgtcgc ccttgccgtc gaggccggcc ttgaccttga gcaccatcgc cgacccgtac
      781 ggctcccagg catgctcgtc ctcgcgcatc cattgcacgc gcaccggccg gcccggcagc
      841 tcacgggcga gcagcgcggc gtcggcagcc gcgtcgtcgg cgccgttatg gccatagcag
      901 ccggcgccgt cgcgatgccg gcagcgcacc ttcgccggct gcagcccgat catgtttgcg
      961 atcgccgtcg ccgtctcgaa gacgctctgg ctgtgcgtgt cgacgatcag gacgtcgtcg
     1021 cgcatctccg cgatcgcggc cgacggtccg atcgaggcgt gcatctgata agggcggcga
     1081 taggtggctt cgaccacccg cgtcgccgcc gtgccgtcgc cgcgcgcatc cgacttgatg
     1141 acgatgtcgc gcgccttctg ggcgaggagc cagtcgtaaa tgccggcatg ggtgggcagc
     1201 gtctgcccct cctcccagcg ggcggtctcg cgcagggcct tggcggcggc gatcgcctgc
     1261 cattccttct ccgccaccac ggcaaggaaa tcgccgttgc ggacgacgcg gatgacgccg
     1321 ggcatggctt cgacggcggc ggtatcgacg ccgaccagcc gcgcgtcgta agtcggctgg
     1381 cgcacgacgc ggccgtgcac gaggccgtcg ggccgcagat cctggacgaa cgccggctcg
     1441 ccggtgactt tcgcgggcag gtcgatgcgc ggcaccgact ggccgatgta gcgccgctgc
     1501 tcgaccggct tcggcttgat cgatgcggtc gcgtcgcgct cgatgtggcg cccgcccagc
     1561 agctcccaat aggtggtgct gcggctgccg ccgcgctcgg cgatcgtgcc atccttgacg
     1621 tcgagacgat cggccggcac gccgaggcgc tcggccgcca tctgcacgag gatgtggcgg
     1681 acctcggcgg cggcgaagcg cacggccgtg ccgccattcg gcatcgagaa gctgccggcg
     1741 gtcgtgccct cgttcgggca gagcgcggtg tcgccggaga cgatccggac gcggccgatg
     1801 tcgacctcga gttcgtcggc gcacagctgg gtgaacgcgg tcaggatccc ctgcccgagc
     1861 tcgaccttgc cggtcagcag cgtgaccgtg ccgtcggcgt tgatgcggat ccaggcgtcg
     1921 agcttccggt tcgacgaaag gctgccgggc agccgcggcg cctgcgactg gcccacggcc
     1981 gggattccgg agaggctgaa ggcgagcgcg aaggagccgg tcgtcttcag gaatgagcgg
     2041 cggtcgagaa cggtgctgct catcggacca tctccgcggc tgcgcgcttg acggcgcgga
     2101 cgatgcgatt gtgcgacccg cagcggcaca ggttgccgtc gagggacgaa cggatatccg
     2161 cgtccgaggg attcggcgtc tccgccagca gggcggccgc cgacatcacc atgccgggca
     2221 ggcagtagcc gcactggccg gcctgctcgg cgaggagcgc cttctgcagc gggtgcagat
     2281 cgccgttcgg cttgcgcatt ccctcgaggg tcgtgaccgg cttgccggcg acgcctttga
     2341 cgggcagcga gcacgagcgc accggggtgc cgtcgacgag gaccgtgcag gcgccgcact
     2401 ggccgaggcc gcagccgaac cggacgccgt cgagccggag ctcgtccctg agaacg
//
LOCUS       DATAIQ010000284         1605 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_329557, whole genome shotgun sequence.
ACCESSION   DATAIQ010000284 DATAIQ010000000
VERSION     DATAIQ010000284.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1605)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1605)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1605
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_329557"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..411
                     /locus_tag="VHN20_04910"
     CDS             <1..411
                     /locus_tag="VHN20_04910"
                     /EC_number="2.1.1.100"
                     /EC_number="2.1.1.334"
                     /inference="COORDINATES: protein motif:HMM:NF016107.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxylmethyltransferase
                     family protein"
                     /protein_id="HEX2725142.1"
                     /translation="MWTGGLAGDPLTRTLAGTTSALSGHLLVALGAAIALISQYHMGS
                     AQRADDASGQGGLVQSGPFAISRNPVLLGQAVMFAGLFLAFPDLVQGLIAAAFLAAAF
                     GQVRAEEQALKRIFGDAYGAYAARVPRWIGRIRS"
     gene            complement(455..>1605)
                     /locus_tag="VHN20_04915"
     CDS             complement(455..>1605)
                     /locus_tag="VHN20_04915"
                     /EC_number="2.7.7.65"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0052621 - diguanylate cyclase activity
                     [Evidence IEA];
                     GO_function: GO:0071111 - cyclic-guanylate-specific
                     phosphodiesterase activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="bifunctional diguanylate
                     cyclase/phosphodiesterase"
                     /protein_id="HEX2725143.1"
                     /translation="NDTLGHQAGDAVLKAVGDRLRGCVRQGDVVARLGGDEFAVLQVS
                     PNQPHDAAALAARLVQTIGAPYHIEGQEVVIGTSVGVALSDEQCFLPDQLLKRADLAL
                     YCAKAEGRGTCRFFEAEMDAQLHARRALEMDLRKALANGEFELFYQPQVSIATREVGG
                     YEALLRWRHPERGLVPPSDFIPVAEDTGLIAQLGNWVIRQACREAATWPAGLNVSINL
                     SPVQFRNRTLVDTVVDALQISGLSPARLEVEITESVLLQDNETTVDMLHKLRALGVRV
                     ALDDFGTGYSSLSYLRSFPFDKIKLDQSFVRELSTRADCLAIVQSIARLGASLRMTTI
                     AEGVETEEQVRQLRAAGCAEAQGYLFGRPKPADELVHAQRGTGATQAA"
BASE COUNT          239 a          545 c          564 g          257 t
ORIGIN      
        1 atgtggaccg gaggccttgc cggcgaccct ctgaccagga ccctcgcggg cacgacctcg
       61 gcgctgtcgg ggcatctgct cgtggccctc ggcgcggcga tcgcgttgat ctcgcaatat
      121 cacatgggct cggcgcagcg cgccgacgac gcgagcgggc agggtgggct cgttcaaagc
      181 gggccgttcg cgatctcgcg caatcccgtc ctgctcggcc aggccgtgat gttcgccggc
      241 ctgttcctgg cttttcccga tctggtgcag gggctgatcg cggcggcgtt tctcgccgcc
      301 gcttttgggc aggtgcgcgc cgaggagcag gccctgaagc gaatattcgg cgacgcttac
      361 ggcgcgtatg cggcgcgggt gccgcgctgg atcggccgga tccgatcgtg agccacacgg
      421 cgttcaccgc gagccggccg cttttcaaaa aacctcacgc cgcctgcgtg gcgccggtcc
      481 cgcgctgcgc atggacgagc tcgtcagccg gcttcgggcg gccgaacagg tagccttgcg
      541 cctcggcgca tccggcggcg cgcagctggc gcacctgctc ctcggtctcg acgccctcgg
      601 cgatcgtcgt catgcgcagg ctcgccccga gacgggcgat ggattgcacg atggcgaggc
      661 agtcggcgcg ggtcgacagc tcgcgcacga acgactggtc gagcttgatc ttgtcgaacg
      721 ggaagctgcg caggtagctc agcgaggaat aaccggtgcc gaaatcgtcg agcgcgaccc
      781 gcacgccgag cgcgcgcagc ttgtgcagca tgtccaccgt ggtctcgttg tcctgcagca
      841 ggaccgattc ggtgatctcc acttcgaggc gcgccgggga caggcccgag atctgcagcg
      901 cgtcgacgac ggtatcgacc agcgtgcggt tgcggaactg caccggcgag agattgatcg
      961 agacgttgag accggctggc cacgtcgcgg cttcgcggca ggcctgccgg atgacccagt
     1021 tgccgagctg cgcgatcagg ccggtatcct cggcgacggg gatgaagtcc gaaggcggca
     1081 cgagtccgcg ctccgggtgc cgccagcgca agagcgcctc gtaaccgccg acctccctcg
     1141 tcgcgatgct gacctgcggc tgatagaaca actcgaattc gccgttggcg agcgccttgc
     1201 gcagatccat ctcgagggcc cggcgcgcat gcagctgggc atccatctcc gcctcgaaga
     1261 agcggcacgt gccgcgcccc tccgccttgg cgcaataaag cgcgaggtcg gcgcgcttga
     1321 gcagctggtc gggcaggaag cattgctcgt cgctcagcgc cacgccgacg ctcgtcccga
     1381 tcacgacttc ctgtccctcg atgtgatacg gcgcgccgat cgtctggacg agccgggcgg
     1441 cgagcgcggc agcgtcgtgc ggctgattgg gcgaaacctg cagcaccgcg aactcgtcgc
     1501 cgccgaggcg ggcgaccacg tcgccctgac gcacgcagcc gcgcaggcga tcgccgacgg
     1561 ccttgaggac ggcatcgccg gcctgatggc cgagcgtgtc gttga
//
LOCUS       DATAIQ010000285         1672 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_191124, whole genome shotgun sequence.
ACCESSION   DATAIQ010000285 DATAIQ010000000
VERSION     DATAIQ010000285.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1672)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1672)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1672
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_191124"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..193)
                     /locus_tag="VHN20_04920"
     CDS             complement(<1..193)
                     /locus_tag="VHN20_04920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014332126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HEX2725144.1"
                     /translation="MIEVRVPDEQEGTKAVVRAWLKQVGDAVALNDPLVELETDKVTQ
                     EVPAPAAGVLSEIVLDTDAE"
     gene            complement(194..>1672)
                     /locus_tag="VHN20_04925"
     CDS             complement(194..>1672)
                     /locus_tag="VHN20_04925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015008065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase C-terminal domain-containing
                     protein"
                     /protein_id="HEX2725145.1"
                     /translation="FIEDNGYGISVTSDYQTPGQDIAANLASFRGLTIWNGDGTEPAQ
                     AARMIAESVHHVRGRKGPALIRLTVPRLEGHSAQDTQAYKSPEAIAEEWGRDPLPKLK
                     RFLPELDWDRIAASVEAEVAAARREAEGRPVSPPERVTDHVFFEGAHAAVGGQAGLPL
                     AGLTEAAAPEAQRINMVTAIRRVLDHELAANPKMLVFGEDVGPKGGVHAVTLGLQEKY
                     GRDRVFDTSLNEEGIVGRAVGMALAGLLPVPEIQFRKYAEPAAEQIADCGTMRWRTAN
                     RFAAPLVLRIPGGFFKCGDPWHSQTNEVQFVHSPGWKVAVPSNAEDAVGLLRASLRGH
                     DPVIFFEHRAMLDDSWARRQWPGDEFVVPFGKARKTREGDRITIVTWGAMVPRCEAAA
                     EGVSADVIDLRTLMPWDRGQVLDSVRRTRRCLIVHEDLRTGGFGAEIAAVVADEAFLD
                     LDAPVARVTMPDVPSPHHPSLLDWAVPSVDKIRGEIERLVGF"
BASE COUNT          236 a          609 c          560 g          267 t
ORIGIN      
        1 cctcggcgtc cgtgtcgagc acgatctcgc taagcacgcc ggccgcaggc gcgggcactt
       61 cctgggttac cttgtcggtc tcgagctcga ccagcggatc gttgagcgcg acggcatcgc
      121 cgacctgctt gagccacgcg cggaccaccg ccttggtgcc ttcctgctcg tcggggacgc
      181 ggacctcgat catctagaac cccaccagcc gctcgatctc gccgcggatc ttgtcgacgc
      241 tcggcaccgc ccagtcgagc aggctgggat gatgcgggct cggcacatca ggcatcgtca
      301 cccgcgcgac cggcgcgtcg aggtcgagga aggcctcgtc ggcgacgacc gccgcgattt
      361 ccgcgccgaa tccgccggtg cgcaggtcct cgtggacgat caggcagcgc cgcgtccggc
      421 gaacgctgtc gagcacttgt ccgcggtccc acggcatcaa ggtacgcaaa tcgatgacgt
      481 cggcgctcac gccttccgcc gccgcctcgc agcgcggcac catcgcgccc caggtgacga
      541 tcgtgattct gtcgccctcg cgggtcttgc gcgctttgcc gaacggcacg acgaactcgt
      601 cgcccggcca ctgtcggcgg gcccacgaat cgtcgagcat cgcccggtgc tcgaagaaga
      661 ttactgggtc gtggccgcgc agcgatgcgc gcagcagccc gaccgcgtcc tcggcgttcg
      721 acggcaccgc caccttccag ccgggcgagt ggacgaactg cacctcgttg gtctggctgt
      781 gccacgggtc gccgcacttg aagaagccgc cggggatgcg cagcactaga ggcgccgcga
      841 agcggttggc ggtgcgccag cgcatcgtcc cgcaatcggc gatttgctcg gccgccggct
      901 cggcatattt gcggaactgg atttcgggca ccggaagcag gccggcaagc gccatgccga
      961 ccgcccggcc gacgatgccc tcctcgttca gggacgtgtc gaacacgcgg tcccggccgt
     1021 acttttcctg caggccaagc gtcacggcgt ggaccccgcc cttgggcccg acatcctcgc
     1081 cgaacaccag catcttcggg ttggcggcaa gctcgtggtc gagcacccgg cggatggcgg
     1141 tgaccatgtt gatccgctgg gcctcgggcg cggccgcttc ggtcaagccg gcgagcggca
     1201 gaccggcctg gccgccgact gccgcgtgcg ccccctcgaa gaacacatgg tcggtgaccc
     1261 gctcgggcgg cgacaccggc cggccctccg cctcgcgccg ggccgccgcc acctcggcct
     1321 cgaccgacgc cgcgatccgg tcccaatcga gctcgggcag gaagcgcttg agcttgggca
     1381 agggatcgcg cccccattcc tccgcgatcg cttccgggct cttgtaggcc tgggtgtcct
     1441 gcgcgctatg gccctcgagc cgcggcacgg tcagccggat cagcgccggc cccttgcggc
     1501 cgcggacatg atggacggat tcggcgatca tccgcgccgc ctgggccggc tccgtcccat
     1561 ccccgttcca gatcgtcagt ccgcggaagc ttgcgaggtt ggcggcgatg tcctgcccgg
     1621 gggtctggta gtcggaagtg accgagatgc cgtagccatt gtcctcgatg aa
//
LOCUS       DATAIQ010000286         2147 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_292019, whole genome shotgun sequence.
ACCESSION   DATAIQ010000286 DATAIQ010000000
VERSION     DATAIQ010000286.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2147)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2147)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2147
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_292019"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..339)
                     /locus_tag="VHN20_04930"
     CDS             complement(<1..339)
                     /locus_tag="VHN20_04930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725146.1"
                     /translation="MSRRAQENIVAGFVLAFFLAIIVLSLDYSPRARFVPMPVAVFGA
                     LLVTIQLVWQNLRSPDELHVDVLELLTGRARNVDADGNVTTAPVRDAGSGVRKQLIAF
                     GMVALLLAGFL"
     gene            complement(336..1853)
                     /locus_tag="VHN20_04935"
     CDS             complement(336..1853)
                     /locus_tag="VHN20_04935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018699565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HEX2725147.1"
                     /translation="MLDAIVAGLMSLLTLQAILFMLIGIVYGLVIGILPGLGGITAMA
                     LLLPFSYGYEPGATLALLLGAHIATIWGDSVTSILFNVPGSSKSLALLFDGFPMTQKG
                     QAKRALGASAGAALLGGIIGAVFLAISIPIVRPIMLAMGPSEYLVMALWGLTLIATFS
                     EGSLLKGMIAACFGVVIAFIGMDPVTATPRYTFGSIFLMDGISFPVATIGLFAVGEMM
                     KLYVRGEDGIVSRDLRDENSTVWQGVMDSFRHWGLVMRSSILGLWIGVLPGVGASVGG
                     IAAYAQAVQTSKHPELFGKGNVEGVIAPDATLGANEGGGLLPTLAFGIPGGESMAILL
                     LAFIGMGIVPGAQMLTNQLDVVFTLVWIVVIGSIVTTLIGMAISPYLARMPNLDANLM
                     VPIVLSICFVGAYSTRGQPNDVIVCAAFGFLGFLMEKYHFSRANLVIGMVLADMIERS
                     LHLSLTLYGDFFIFKRPIALTMFILVVLTTAWPFLRNWRRRRAEMAAGSQPRGAA"
BASE COUNT          416 a          690 c          731 g          310 t
ORIGIN      
        1 aaggaagccg gcgagcagca gcgccaccat gccgaaggcg atgagctgct tgcggacgcc
       61 ggaaccggca tcgcgcacag gcgccgtggt tacgttcccg tccgcgtcga cattgcgggc
      121 ccgcccggtc agcagttcca gaacgtcgac gtggagctcg tcgggcgacc gcagattctg
      181 ccacaccagc tggatggtca ccaggagcgc gccgaagacc gcgaccggca tgggcacgaa
      241 gcgagcccgc ggcgagtagt cgaggctgag cacgatgatg gcgagaaaga acgccagcac
      301 gaagccggcg acgatgtttt cctgcgcgcg ccggctcatg ctgccccccg cggctgcgag
      361 cccgccgcca tttccgcgcg gcgccggcgc cagttgcgga gaaacggcca ggcggtcgtg
      421 agcacgacca ggatgaacat cgtcagcgcg atcggccgct tgaagatgaa gaaatcgccg
      481 tacagcgtca gcgacaggtg caggctgcgt tcgatcatgt cggcaaggac catgccgatg
      541 accaggttgg cgcgcgagaa atgatatttc tccatcagga agccgaggaa cccgaatgcc
      601 gcgcacacga tcacgtcgtt tggctgcccg cgcgtcgaat aggcgccgac gaagcagatc
      661 gacagcacaa tcggcaccat caggttggcg tcgagattgg gcatgcgcgc gagatagggg
      721 gagatggcca tgccgatcag cgtcgtgacg atgctgccga tcaccacgat ccacaccagc
      781 gtgaagacga cgtcgagctg gttggtgagc atctgcgcgc cgggaacgat gcccatgccg
      841 atgaaggcca gcagcaggat cgccatgctt tcaccgccgg gaatgccgaa ggcgagcgtc
      901 ggcagaagcc cgccgccctc gttggcgccg agggtcgcat cgggcgcgat cacgccctcc
      961 acgttgccct tgccgaagag ctcagggtgc ttggatgtct gcacggcctg cgcgtaggcg
     1021 gcgatgccgc cgacgctggc gccgacgccg ggcagcacgc cgatccagag gccgaggatg
     1081 ctcgagcgca tcacaagccc ccagtggcgg aacgagtcca tcacgccctg ccagaccgtg
     1141 ctgttctcgt cgcgcaggtc gcggctgacg atgccgtcct cgccgcgcac gtagagcttc
     1201 atcatctcgc ccaccgcgaa caggccgatg gtcgcgacgg gaaacgagat gccgtccatc
     1261 aggaagatgc tgccgaacgt gtagcgcggc gtcgccgtga cgggatccat gccgatgaag
     1321 gcgatcacga cgccaaagca ggccgcgatc atgcctttga gcaaggagcc ttcgctgaag
     1381 gtggcgatca gggtcaggcc ccagagcgcc atcaccagat attcgctcgg ccccatggcg
     1441 agcatgatcg gacgcacgat cgggatgctg atggcaagga agaccgcgcc gatgatgccg
     1501 ccgagcagcg ccgccccggc ggacgccccg agcgcgcgct tcgcctgtcc cttctgggtc
     1561 atcgggaagc cgtcgaacag cagcgcgagg cttttgctcg agccgggcac gttgaacagg
     1621 atgctggtga cggaatcgcc ccagatcgtg gcgatatgtg ccccgagcag gagggccagg
     1681 gtggcgccgg gctcgtagcc gtaggagaag ggcagcagca gcgccatcgc cgtgatgccg
     1741 ccgagccccg gcaggatgcc gatcacgagg ccgtagacga tgccgatcag catgaacaaa
     1801 atggcctgca atgtgagcag cgacatcagg ccagcaacaa tggcatcgag catcagcccg
     1861 cttctccccg cgcttcctcg ttatgttgtc ggccgcctgg acggggccgc agcggcatgg
     1921 ccggcatgcg cctgttggcc gatatcatga cggggtttgc cggcatcgac aagacgcagg
     1981 cccaccggcc gccattcgaa tcacggctat cttgatgggc ggctgcgcct tcccgaaaga
     2041 ccccgccggc ggggggatgc agggcggaac cgcgccgatc aacggcatcg acattcatta
     2101 ccgggttgag ggcaggggac cggtcctggt gctcgtgcac ggcctcg
//
LOCUS       DATAIQ010000287         1843 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_237641, whole genome shotgun sequence.
ACCESSION   DATAIQ010000287 DATAIQ010000000
VERSION     DATAIQ010000287.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1843)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1843)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1843
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_237641"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(96..926)
                     /locus_tag="VHN20_04940"
     CDS             complement(96..926)
                     /locus_tag="VHN20_04940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012045638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HEX2725148.1"
                     /translation="MATDQAVARAGTTAAQEVGDDILYEVRDGVAFVTFNRPQARNAF
                     TFAMYERLAEICAIADEDRSIKAMLLTGAGGKAFAAGTDISQFRAFKTPEDALNYEER
                     VDRVLGALERCRVPTIAAISGACTGGGAGIAGCCDIRIAASNARFGVPIARTLGNCMS
                     MSNFSRFAALIGPAAVKDMIFTARLIEAPEAKAIGLVNEVVDDPANLMTRAEEVTRMV
                     AGNAPLTLQAAKEALRRLQPRLSREEGQDLILMCYMSEDFREGMDAFLNKREPKWKGR
                     "
     gene            complement(1043..>1843)
                     /locus_tag="VHN20_04945"
     CDS             complement(1043..>1843)
                     /locus_tag="VHN20_04945"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008960292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX2725149.1"
                     /translation="DGPYAGRPGFDQIAQGMGGLMSITGLPGQGPVRVGIPIADLTAG
                     IYCSFGILVALLAREETGRGQWVQTSLLQAQVAMLDFQAARWLINGEVPKQAGNDHPL
                     YMPTGVFETADGHLNIAVTGTIMWERFCQVADGQDLLAHPDYATAALRSKNRAALSDE
                     INKRLRTADTATWIARFNEAGVPSGPINSIDQVFEDPQVKHMRMAQTVTSPALGEISL
                     VAQPVTLSDTPSSLRVAPPESGEHTDVILSEFGYAPDEIAEFRRSGVI"
BASE COUNT          255 a          632 c          639 g          317 t
ORIGIN      
        1 ggcgagcatc agcgtgcagg tcgggcctgc catcacgtgc gtcaggtcga cgaccttgag
       61 gccggcgagc ggccccgtct tcgctggccg ggcgctcatc ggcctttcca cttcggctcg
      121 cgcttgttga ggaacgcgtc catgccttcg cggaaatcct cgctcatgta gcacatcagg
      181 atcaggtcct ggccctcctc gcgcgacagc cgcggctgca ggcgccgcaa ggcctccttg
      241 gccgcctgca gcgtgagcgg cgcgttgccc gccaccatgc gcgtcacctc ttccgcccgc
      301 gtcatcaggt tggccggatc gtcgacgacc tcgttgacga ggccgatggc cttggcctcg
      361 ggggcctcga tcaggcgcgc ggtgaagatc atgtccttga cggccgccgg gccgatcagc
      421 gcggcgaagc gcgagaaatt ggacatggac atgcaatttc cgagagtccg ggcgatcggc
      481 acgccgaaac gcgcattgct cgcggcgatg cggatgtcgc agcagccggc aatgccggcc
      541 ccgccgcccg tgcaggcgcc ggagatggcg gcgatcgtcg gcacgcggca gcgctcgagg
      601 gcgccaagca cgcggtcgac gcgctcttca taattgagcg cgtcctcggg cgtcttgaag
      661 gcgcggaatt gcgaaatgtc ggtgccggcc gcgaaggcct tgccgccggc cccggtcagc
      721 agcatggcct tgatcgagcg gtcctcgtcg gcgatcgcgc agatctcggc gaggcgctcg
      781 tacatggcga aggtgaaggc gttgcgcgcc tgcggtcggt tgaaggtgac gaaggcgacg
      841 ccgtcgcgca cctcgtagag gatgtcgtcg ccaacctcct gtgccgctgt ggtgcctgcg
      901 cgcgccactg cctgatcggt cgccatgtgt cagctccttg tttcccggcg ggtgttcgcc
      961 aaggcgaccc cgcttcatga tctgcttttt gcccggcatc cggcgaagcg ggtcccgccc
     1021 ggccggcgcg tgccgcgagc ccttatatca ccccgctgcg ccggaactcg gcgatttcgt
     1081 cgggggcgta gccgaactcg ctcaggatca cgtccgtgtg ctcgccgctc tccggcggtg
     1141 ccacccgcag gctgctcggg gtgtcgctca gggtgaccgg ctgcgccacg aggctgatct
     1201 ccccgagcgc cggcgaggtg accgtctggg ccatgcgcat gtgcttgacc tgcgggtcct
     1261 cgaacacctg gtcgatgctg ttgatcggcc cggaggggac cccggcctcg ttgaagcggg
     1321 cgatccaggt tgcggtatcg gcggtgcgca gccgcttgtt gatctcgtcc gagagcgcgg
     1381 cccggttctt cgagcgcagg gccgcggtcg cataatcggg atgggccagg agatcctgcc
     1441 cgtccgccac ctggcagaac cgctcccaca tgatggttcc ggtcacggcg atgttgaggt
     1501 ggccgtccgc cgtctcgaac acgccggtcg gcatgtacaa aggatggtcg ttgccggcct
     1561 gcttcggcac ctcgccgttg atcagccagc gcgccgcctg gaagtcgagc atcgccacct
     1621 gtgcctgcag cagcgaggtt tgcacccact gcccgcgtcc ggtctcctcg cgcgccagca
     1681 gcgcgaccag gatgccgaac gagcagtaga tcccggctgt caggtcggcg atcgggatgc
     1741 cgacgcgcac cggcccctgg cccggcaggc cggtgatgga catcagcccg cccatgccct
     1801 gggcaatctg gtcgaagccg ggccggccgg cataggggcc gtc
//
LOCUS       DATAIQ010000288         4792 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_430055, whole genome shotgun sequence.
ACCESSION   DATAIQ010000288 DATAIQ010000000
VERSION     DATAIQ010000288.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4792)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4792)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4792
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_430055"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1169
                     /locus_tag="VHN20_04950"
     CDS             <1..1169
                     /locus_tag="VHN20_04950"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="PAS domain-containing sensor histidine kinase"
                     /protein_id="HEX2725150.1"
                     /translation="ARFDDETKAAQPPAPDMPADARVRELAAILDTATDGVIILDDGG
                     RIVSLNRSAEALFGYDQTDVAGESVAVLLAPESQQVTGGYLEGLRDSGVATLLNDGRE
                     VLGRVRQGGVIPLFMTIGRLSEEPGRKFCLVLRDMTAFKTAEAELHAAKRAAQEASAY
                     KSDFLTRLGDEVKSPLNAIIGFAELMREERFGPLGNERYRDAVKDIHACGRHIGKILD
                     GLLDLARIEAGRMELSFTGVNLNDLVANCLAEMLQQAARERIVMRTSFAPKMPAVVAD
                     ERSLREIVLNIVSNAVKFTSAGGQVIISTAMSDRGEVALRVRDTGVGMTDDEIRTALE
                     PLRQPVPGKGGSGLGLALARALIEANRGALHITSTPHEGTLVEVLFPPTRVLAE"
     gene            1187..3904
                     /locus_tag="VHN20_04955"
     CDS             1187..3904
                     /locus_tag="VHN20_04955"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009735744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX2725151.1"
                     /translation="MSTYRLDKLFAPQTVALVGASRREGSLGAAVLRNLRDSGFPGRI
                     DLINPRHAEIDGIPCVARIEELTSAPDLVVIAAPPASIPGIVAAAGAKGVAAAVIIAA
                     GLGHGPGSLAERARLEARRFGLRLIGPNCLGVLAPHARLNASFAARMPAPGDLALISQ
                     SGAVAAGLLEWAAGRNIGLSAIVSLGDQIDVDFGDCLDYFATDRATRAILLYIESIAD
                     VRKFMSAARAAARTKPVVVIKSGRHAQGARAAATHTGALAGADAVYDAAFRRAGLLRV
                     LDLDELFAAAETLGRQKPFAGARLAVLTNGGGIGVLAVDRLMDFGGRLAGLSQPAFVA
                     LDRVLPPTWSKANPVDIIGDANADRYARALAALLADPGNDAVLVLNVPTALASAGDAA
                     EAVVATVAQHRAEAPSHKPVFAVWLGEDDRSARAFDGAAIPHFATEAEAVRGFMHLVR
                     YRDAQDDLMETPDSIPTEFAPDVAGAQAIIAEAIAGAQTWLDPLQVNALLHAYDIPVA
                     PVMLARDPDEAAAAARPIHADGRTVAVKILSPDIVHKSDVGGVKLDLTTEDAVRRAAA
                     DVLARARHLRPDARITGVTVQAMVRRSKAHELIAGLADDPTFGPVVVFGSGGTAVEVT
                     DDKALALPPLDLKLADDLIARTRVSRVLKGYRDVPAADQRAVALVLVKIAQLAADLPE
                     VRELDINPILADESGIIAVDARVALAPVAAADRKGRGHPRFAIRPYPKEWERAVTLAS
                     GPAVFIRPARPEDEGLVRTFLDQVTPEDLRLRFFAPIRIFTHAFIARLIQLDYARAIA
                     FVAIDVATQAMVGAVRLHADANRETGEFGILVRSDLKGVGIGWELMRIIIEWARAEGL
                     RVVEGQVLRENATMLDMCQRLGFAVRADPNDPDIKVVALAINGAAESST"
     gene            complement(4041..4523)
                     /gene="bfr"
                     /locus_tag="VHN20_04960"
     CDS             complement(4041..4523)
                     /gene="bfr"
                     /locus_tag="VHN20_04960"
                     /EC_number="1.16.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004322 - ferroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0008199 - ferric iron binding [Evidence
                     IEA];
                     GO_process: GO:0006880 - intracellular sequestering of
                     iron ion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin"
                     /protein_id="HEX2725152.1"
                     /translation="MKGDTKVIEYLNRGLRSELTAINQYWLHYRILDNWGFKELAKQW
                     REESIEEMRHADRFVERILFLDGFANMQVLDPLRIGQSIQELLECDLAAEHDARALYL
                     EAAKHCESVGDRVSKNLFEELMADEEHHIDFLETQLGLIKQVGVQLYAQKHIGKLDEH
                     "
BASE COUNT          724 a         1662 c         1645 g          761 t
ORIGIN      
        1 gggcacgttt cgacgacgag acgaaggcgg cgcagccgcc cgcgcccgac atgccggcgg
       61 atgcccgcgt gcgcgagctc gcggcaattc tcgatacggc cacggacggc gtcattatcc
      121 tcgacgacgg cgggcggatc gtctcgctga accgctcggc ggaggcgctg ttcggctacg
      181 accagacgga cgtcgctggc gagagcgttg ccgtcctgct ggcgcctgaa agccagcagg
      241 tcaccggcgg atatctcgag ggtctgcgcg acagcggcgt ggcgacgctg ctcaatgacg
      301 gccgcgaggt gctcgggcgc gtccgccagg gtggcgtcat cccgctgttc atgacgatcg
      361 ggcgactgag cgaggagccc gggcgcaagt tctgcctggt gctccgggac atgaccgcat
      421 tcaagaccgc cgaggcggag cttcacgccg ccaagcgtgc cgcgcaggag gcgagcgcct
      481 acaagtctga cttcctgacg cggctcgggg acgaggtgaa gagcccgctg aatgcgatca
      541 tcggtttcgc cgagctgatg cgcgaggaac gcttcgggcc gctcggcaac gagcgctacc
      601 gcgacgccgt gaaggacatc cacgcctgcg gccggcacat cggcaagatc ctggacggtc
      661 tgctcgacct cgccaggatc gaagccgggc gcatggagct gtctttcacc ggcgtcaatc
      721 tcaacgactt ggtcgccaac tgcctggccg agatgctgca gcaggccgcc cgcgaacgca
      781 tcgtgatgcg cacgagcttc gcccccaaga tgccggcggt cgtcgccgac gagcgttccc
      841 tgcgagagat cgtgctcaac atcgtctcga acgcggtgaa attcacaagt gccggcggtc
      901 aggtcatcat ctcgaccgcg atgagcgatc gtggcgaggt cgcgttgcgc gtacgcgaca
      961 cgggcgtcgg catgaccgac gacgaaatca ggacggcgct cgagccgctg cgtcagccgg
     1021 tcccgggaaa gggcggcagc gggctcggcc tcgccctcgc cagggccttg atcgaagcca
     1081 accgcggcgc cctgcacatc accagcacgc cgcatgaggg cacgctcgtg gaggttctgt
     1141 ttccgccgac gcgcgtcctg gcggaatagc cgccggtcgg cgcgcgatgt cgacctaccg
     1201 cctcgacaag ctgttcgcac cgcagaccgt cgcgctcgtc ggcgccagcc gacgcgaagg
     1261 ctccctcggc gcggccgtgc tgcgcaatct gcgcgactcg ggctttccgg gccgcatcga
     1321 cctgatcaat cctcgccatg ccgagatcga cggcattccc tgcgtcgccc gcatcgagga
     1381 gctgacgtcg gcgcccgacc tggtggtcat cgccgcgccg ccggcaagca ttcccggcat
     1441 cgtggcggcc gccggcgcga agggcgttgc ggctgcggtc atcatcgcgg ccgggcttgg
     1501 ccacgggccg ggctcgctcg ccgagagagc gcggctcgag gcgcgacggt tcgggctcag
     1561 gctgatcggg ccgaactgtc tcggcgtgct ggcgcctcac gcgaggctca atgccagctt
     1621 cgcggcgcgc atgccggcgc cgggcgatct cgcgctgatc tcgcaatcgg gcgccgtcgc
     1681 cgccggtctc ctcgaatggg cggcggggcg caatatcggg ctgtccgcga tcgtgtcgct
     1741 cggtgaccag atcgacgtcg atttcggcga ttgcctcgac tacttcgcga cagatcgcgc
     1801 cacgcgcgcc attttgctct acatcgaatc gatcgccgac gtgcgcaagt tcatgtcggc
     1861 ggcgcgtgcg gcggcgcgca ccaagccggt cgtcgtcatc aagtcggggc gacatgcgca
     1921 aggcgcgcgc gccgcggcga cgcataccgg cgcgctcgcc ggagcggacg ccgtctacga
     1981 cgccgccttc cgccgcgccg ggctgttgcg cgtgctcgat ctcgatgagc tgttcgcggc
     2041 ggccgaaacg ctggggcggc aaaagccgtt cgcgggtgcg cggcttgccg tgctcaccaa
     2101 cggcggcggc atcggcgtgc tggcggtcga ccggctgatg gatttcggcg gccggctggc
     2161 gggcctctcg cagccggcct tcgtggcgct cgatcgcgtg ctgccgccca cctggtcgaa
     2221 ggccaatccg gtcgacatca tcggcgatgc caatgccgac cgctatgcgc gcgcgctcgc
     2281 ggcgctgctc gccgatcccg gcaacgacgc cgttctcgtg ctcaacgtgc cgaccgcgct
     2341 ggcgagcgcc ggcgacgccg ccgaggcggt cgtcgccacc gtcgcccagc accgggccga
     2401 agcgccgtcc cacaagcccg tcttcgccgt ctggctcggc gaggacgacc ggtccgcgcg
     2461 cgccttcgac ggcgcggcga tcccgcattt cgccacggag gcggaagcgg tgcgcggctt
     2521 catgcacctc gtgcgctatc gcgatgcgca ggacgacctc atggagacgc cggacagcat
     2581 cccgaccgag ttcgctccgg atgtcgccgg cgcacaggcg atcatcgcgg aagcgatcgc
     2641 cggcgctcag acatggctcg acccgctgca ggtcaatgcc ctgctgcatg cctacgacat
     2701 tccggtcgcg ccggtgatgc tggcacgcga tcccgacgag gcggctgccg cagcgcgtcc
     2761 gatccacgcc gacggccgca ccgtggccgt gaaaattctt tcgcccgaca tcgtccacaa
     2821 atccgacgtc ggtggcgtca agctcgatct caccaccgag gacgccgtgc gtcgcgcagc
     2881 cgccgacgtc ctcgcgcgcg cccggcatct ccggcccgat gcgcgcatca ccggcgtgac
     2941 cgtccaggcg atggtgcggc ggagcaaggc gcacgagctg atcgccggcc ttgccgacga
     3001 tcccaccttc gggccggtcg tcgtgttcgg cagcggcggc accgccgtcg aggtgaccga
     3061 cgacaaggcg cttgccttgc cgccgctcga cctgaagctc gcggacgacc tgatcgcacg
     3121 cacgcgcgtg tcgcgcgtgc tcaagggtta tcgcgacgtg ccggccgccg atcagcgggc
     3181 ggtggcgctg gtgctcgtca agatcgcgca gctcgcggcc gatctcccgg aggtgaggga
     3241 gctcgacatc aacccgatcc tcgccgacga gagcggcatc atcgccgtcg atgcgcgggt
     3301 cgccctggcg ccggtcgcgg ccgccgaccg caagggaagg gggcatccac gtttcgccat
     3361 ccgcccctat ccgaaggagt gggagcgcgc ggtcacgctc gcgagcggcc cggcggtgtt
     3421 catccggccg gcgcggccgg aagacgaagg cctcgtgcgc accttcctgg accaggtcac
     3481 gcccgaggac ctgcgcctgc gctttttcgc gccgatccgc atcttcacgc acgccttcat
     3541 cgcgcgcctg atacagctcg actacgcgcg cgcgatcgcc ttcgtcgcca tcgacgtggc
     3601 cacccaggcc atggtcggcg ccgtccggct ccacgccgac gccaatcgcg agaccggcga
     3661 gttcgggatc ctcgtccgct ccgacctcaa gggcgtgggt atcggctggg agctgatgcg
     3721 catcatcatc gaatgggcgc gcgccgaggg gctgcgcgtg gtcgaggggc aggtcctgcg
     3781 cgagaacgcg accatgctcg acatgtgcca acggctcggc tttgcggtcc gcgccgaccc
     3841 gaacgatccc gacatcaagg tcgtggcgct ggcgatcaac ggcgcggctg agtcgtcaac
     3901 gtaaccgcat tgtgctggtc ttggtgcctc acggcgagtg tggcgatcgt ggaagttacg
     3961 gcggcaggcc gctgctcgag atcaccgccc gcacagcagt tggccccgga cgtgatccca
     4021 ccctcgtgac ggatcgcgcg tcagtgctcg tccagcttgc cgatatgctt ctgggcgtag
     4081 agctggacgc cgacctgctt gatcagcccg agctgcgtct cgaggaagtc gatgtggtgc
     4141 tcctcgtcgg ccatcagctc ctcgaacagg ttcttggaga cgcggtcgcc gacggactcg
     4201 caatgcttgg ccgcttcaag atagagcgcc cgggcgtcgt gctctgccgc cagatcgcat
     4261 tccaggagtt cctggatgct ctggccgatg cgcagcgggt ctagcacctg catgttggca
     4321 aagccgtcga ggaacaggat gcgttcgacg aagcggtcgg cgtggcgcat ctcctcgatc
     4381 gattcctcgc gccactgctt ggcgagctcc ttgaagcccc agttgtcgag gatgcggtaa
     4441 tgcagccagt actggttgat ggcggtcagc tcggaacgca agccgcgatt cagatattcg
     4501 atgaccttgg tgtcgccctt cattggtctc tccctcgccc ggctgaacaa tcgatgggta
     4561 tagacgcgag ggcagggatt cggttccgtc gcgcgcgatc cggcaaagcc ggcgcgcggc
     4621 attcatccgc ggaacatgcc ggacaacaga gatccggacc ggatcgagac gctttgagcg
     4681 gtccgcctta aagcgaaggc tcggccgcga tcgacggggc gaggacggcg gcgctgcagc
     4741 agccgcaggc tccggccgcg cattgggcag ccgcaagcgc cttgtccaga tc
//
LOCUS       DATAIQ010000289         3638 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_292109, whole genome shotgun sequence.
ACCESSION   DATAIQ010000289 DATAIQ010000000
VERSION     DATAIQ010000289.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3638)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3638)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3638
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_292109"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            42..1055
                     /locus_tag="VHN20_04965"
     CDS             42..1055
                     /locus_tag="VHN20_04965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase"
                     /protein_id="HEX2725153.1"
                     /translation="MSSPVLVTGAAGFIGFHVARRLLESGVRVVGADSFTSYYDPRLK
                     EARFAELAAHKGFSGARLDLADEAAAQALFTEHRPKRVVHLAAQPGVRRALTDPHPYV
                     AANVVGFLNILEGCRHGAVEHLVYASSSSVYGANRKLPFSERDRVDHPISLYAATKKA
                     DELMAHAYAHLFGLPATGLRFFTVYGPWGRPDMAVYAFTDAIAGGRPIEVANGGKVWR
                     DFTYIDDVVEGVVRVLERPPASDAAWDATCPDPATSAAPHRVYNIGNDRPEELNQLIA
                     LIEAAVGRTATRLDRPLPPGDVLETRADITDLRNAIGFAPATPLEEGIRRFVEWYRSY
                     HRG"
     gene            1163..2275
                     /locus_tag="VHN20_04970"
     CDS             1163..2275
                     /locus_tag="VHN20_04970"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX2725154.1"
                     /translation="MYEIPLSASGKPRILYVCCERIVPGSAAATHVHEICDGLIRRGY
                     PVVLVAEHGGKRSGIAGQLGRYARITAAALGKLGRADLIYFRAHFAGFLIALIARILN
                     KPTIQEINGVYAEAFVTHPHFAPLNRILSSMQRQQYGWASALIGVTPQLVTWGSGQAG
                     HARGHHVGNGANTERFRPDGPRTERARRYVLFFGGMTRWHGIEVMLDAARLPSWPQDV
                     DLLLAGSVVDPSLRTRIDDAPANVVWLDRVPQQDLPALIRGAVAALVPTVDPSGITAH
                     GVTPLKLFEMLACGTPVIVSDFRGMADIVRGGACGLVIPSGDAAALAGAVAQLASSSD
                     RARAMGAAGARLVAAEHSWDARAAETAEVIAKVLGK"
     gene            complement(2365..3456)
                     /gene="wecB"
                     /locus_tag="VHN20_04975"
     CDS             complement(2365..3456)
                     /gene="wecB"
                     /locus_tag="VHN20_04975"
                     /EC_number="5.1.3.14"
                     /inference="COORDINATES: protein motif:HMM:TIGR00236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008761 - UDP-N-acetylglucosamine
                     2-epimerase activity [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase
                     (non-hydrolyzing)"
                     /protein_id="HEX2725155.1"
                     /translation="MLASVVGNRPQLIKMAPVSAELVRRGVDEYIIHSGQHYDENMSG
                     IFFRELGIPAPRKTLGVTEKTHGRMTAEMLQKLEDTFLEVKPDALLIYGDTNTTLAAA
                     LAAVKLHIPMAHVEAGPRLYDIDTPEEINRIVADHASRIRFCPDDLSVDNLRKENITA
                     NVYKTGDLMFDAFREFTPIAARESKLLQSLGLDGSEPFAFVTVHRPNNTDSPQALHNL
                     LAFVRESPMPVLFAVHPRTRAACERNGLWDELRSLPQARIAPAIGYIDVLAVLQKTTI
                     VITDSGGLQKESYFAGKPAIVLFHATPWPYLEEVGWLRHVGCLDELRPADLADLVRSF
                     RPQGPRPEFFGDGFAARKVADILKAQGWI"
BASE COUNT          556 a         1238 c         1225 g          619 t
ORIGIN      
        1 tgcgcatcct gccgttcggc gccagggttt tgcggccccc aatgtcctct cccgtccttg
       61 tcaccggcgc cgccgggttc attggcttcc atgtggcacg gcggcttctc gagagcggcg
      121 tgcgggtcgt cggcgccgac agcttcacgt cctattacga tccgcgcctc aaggaggcgc
      181 gcttcgcgga actggccgcg cacaaaggct tttcgggcgc acggctcgat ctcgccgacg
      241 aggccgcggc acaggcgctg ttcaccgagc accggccaaa acgggtcgtg catctcgccg
      301 cccaaccggg cgtgcggcgc gccctgaccg atccgcaccc ttatgtcgca gccaatgtgg
      361 tcggcttcct gaacattctc gaaggctgcc gtcatggcgc ggtcgagcac ctcgtctacg
      421 cctcgtcgag ctcggtctat ggtgccaacc gcaagctccc gttttcagag cgcgaccggg
      481 tcgaccaccc gatcagcctg tatgccgcga ccaagaaggc cgacgagctg atggcgcacg
      541 cctatgccca cctgtttggc ctgcctgcaa ccggcctgcg cttcttcacg gtctatggac
      601 cctggggccg ccccgacatg gccgtctacg ccttcaccga cgcgatcgcc ggagggcggc
      661 cgatcgaggt tgccaacggc ggcaaggtgt ggcgtgactt cacctatatc gatgacgtcg
      721 tcgagggcgt ggtgcgcgtc ctcgagcggc cgccggcaag cgatgcggcc tgggatgcca
      781 cgtgccccga cccggcaacg agcgccgccc cgcaccgggt ctacaacatc ggcaacgatc
      841 gtcccgagga gctcaaccag ctgatcgcgc tgatcgaggc ggccgtcggc cgcaccgcga
      901 cgcgcctcga ccggcccttg ccgcccggcg acgtcctgga gacccgtgcc gacatcacgg
      961 acctgcgcaa cgccatcggc tttgccccgg ccacaccgct cgaggaaggc atccggcgct
     1021 tcgtcgagtg gtatcgcagc tatcatcgcg gctgaggcgc cggggaagcg cgccgccgcg
     1081 cgcctggctt ctctccgagg gcggaccgac gcaccgtctc gacgcggatc ggcgacgcct
     1141 gtagaccgcg cctttgcctc gaatgtacga gattcccctg tctgcctccg gcaagccccg
     1201 catcctctat gtctgctgcg agcgcatcgt gcccggcagc gccgccgcga cccatgtgca
     1261 tgagatctgc gacgggctta tccggcgtgg ctatccggtg gttctggtgg cggagcatgg
     1321 cggcaaacgc agcggcatcg ccggccagct cggccgttat gcgcgcatta ccgcggcagc
     1381 cttgggcaag ctcggccgcg ccgacctcat ctacttccgc gcgcatttcg ccggcttctt
     1441 gatcgcgctg atcgcccgca tcctgaacaa gccgaccatc caggagatca acggggtcta
     1501 cgcggaggct ttcgtcacgc atccgcactt cgcgcccctg aaccgcatcc tgtcatcgat
     1561 gcagcgccag caatacggct gggcgtcggc gctgatcggc gtgacgccgc agctcgtgac
     1621 ctggggctcc gggcaggcgg gccatgcgcg cggccaccac gtcgggaatg gcgccaacac
     1681 cgagcgtttc cgacccgatg gcccgcgcac cgagcgcgcg cgtcgttacg tgttgttctt
     1741 cggcggcatg acgcgctggc acggaatcga ggtgatgctc gacgcggccc gcctgccctc
     1801 atggccgcag gacgtcgacc tgctccttgc aggctcggtg gtcgatccgt ccctcaggac
     1861 ccggatcgac gacgctccag ccaatgtcgt gtggctcgac cgcgtcccgc aacaggatct
     1921 gccggccttg atccgcggcg cagtggccgc cctggtgccg accgtcgacc cgagcgggat
     1981 cacggcccac ggcgtcacgc ctctgaaact gttcgagatg ctggcctgcg gcacgccggt
     2041 gatcgtgagc gatttccggg gcatggccga tatcgtgcgc ggcggcgcct gcggcctcgt
     2101 catcccgtcg ggcgacgcgg cggcgctggc cggcgccgtc gcccagctcg cgtcgtcttc
     2161 cgaccgggcc cgcgccatgg gagcggccgg agcgcggctg gtcgcggcgg agcattcctg
     2221 ggacgcccgc gccgccgaga ccgccgaggt gatcgccaag gtgctcggca agtagcgaag
     2281 gacagcgctt cagatcgtat ctcgatgatg ctgtccgggc actgaaacgt cgccaagtcc
     2341 gggcacgacg atgtcgcagg acggtcagat ccagccctgg gccttgagga tgtcggcgac
     2401 cttgcgcgcc gcgaagccgt cgccgaaaaa ctccggccga gggccctgcg gccggaacga
     2461 tcgcacgagg tcggcgaggt cggccggcct cagctcgtcg aggcagccga catgccggag
     2521 ccagccgacc tcctcgagat agggccacgg cgtcgcatgg aacaacacga tggcgggctt
     2581 gccggcgaaa taggattcct tctgcaggcc gcctgaatcg gtgatcacga tcgtcgtctt
     2641 ctgcagcacg gcgagcacgt cgatatagcc gatggccggg gcgatgcggg cctgcgggag
     2701 gctgcggagc tcatcccaga gaccgttgcg ctcgcaggcc gcccgggtgc gcgggtgcac
     2761 ggcgaacaac accggcatcg gactctcgcg cacgaaggcg agcaggttat ggagcgcttg
     2821 cgggctgtcc gtgttgttgg ggcgatgcac ggtgacgaag gcgaacggct cgctgccgtc
     2881 gaggccgaga gattgcagca gcttcgactc gcgcgcggcg atcggcgtga actcgcggaa
     2941 ggcgtcgaac atcagatcac cggtcttgta gacgttggcg gtgatgttct ccttgcgcag
     3001 attgtcgacc gacaggtcgt cgggacagaa gcggatgcgc gacgcatggt cggcgacgat
     3061 gcggttgatc tcctcgggag tatcgatgtc gtaaaggcgt gggcccgcct cgacatgcgc
     3121 catcgggata tgcagcttca ccgccgcaag cgccgccgcc agcgtcgtgt tggtgtcacc
     3181 gtagatgagg agcgcatccg gcttgacctc gagaaacgtg tcctcgagct tttgcagcat
     3241 ctccgccgtc atgcgcccat gcgtcttctc ggtcacgcca agggtcttgc gcggcgcggg
     3301 aatcccgagc tcgcgaaaga agatgccgga catgttctcg tcgtagtgct ggcccgaatg
     3361 gatgatgtat tcgtcgacgc cgcggcgcac gagctccgcc gacacgggtg ccatcttgat
     3421 cagctggggt cggttgccga cgacgctcgc aagcattgcg gtcagggctc ctttgggtgg
     3481 cggcgctgct ggtcgggatg tccgccgcgg gcggacctgc ggcgcgccgg gtcgcggcct
     3541 ctgtagagca tgatgcggcg gagtggaaac tcagaaagag ctggatcaga tcgaatcgaa
     3601 cccgctcttt ttcttatcgg ggcgcccgct ctcggatc
//
LOCUS       DATAIQ010000290         4082 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_14932, whole genome shotgun sequence.
ACCESSION   DATAIQ010000290 DATAIQ010000000
VERSION     DATAIQ010000290.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4082)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4082)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4082
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_14932"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..239)
                     /locus_tag="VHN20_04980"
     CDS             complement(<1..239)
                     /locus_tag="VHN20_04980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019403288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HEX2725156.1"
                     /translation="MKKIEAIIKPFKLDEVKEALQDVGLQGITVIEAKGFGRQKGHTE
                     LYRGAEYVVDFLPKVKLEIVLADDMVDSAVEAIRKA"
     gene            443..1927
                     /locus_tag="VHN20_04985"
     CDS             443..1927
                     /locus_tag="VHN20_04985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015933703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052855 - ADP-dependent NAD(P)H-hydrate
                     dehydratase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-hydrate dehydratase"
                     /protein_id="HEX2725157.1"
                     /translation="MSDLLTNAEMRAADARTIAAGTPGYVLMQRAGEAVAEAAQRMLG
                     GEGSVLVLCGPGNNGGDGFVAARLLARRGYNVAVALLGNPNKIRGDAALARSEWRGPV
                     VAAHEITPARAGLLVDALLGSGLDRDLEDEARAVVERINAARRPVLSVDIPSGIDGDT
                     GRVRGAAVKATRTVTFATRKPGHLLYPGRSHCGTLEVADIGISADTIAQVGGRTYANH
                     PDLWRQRLPRPRADAHKYERGHTLVLSGDATHSGAARLTARAALRAGSGLVTLASPSD
                     ALVVNAAQLTAIMLRACDWPADLQGLLADARFNALALGPALGIGPRTHEFVLLALRSG
                     RATVLDADALTSFAAEPATLAGETGAGDRPVVLTPHAGEFARLFESRVDISGATSKIE
                     GARRAAVFTGALMVLKGPDTVIAAPDGRAAINENGAPWLATAGSGDVLSGIIGGLLAQ
                     GMPGFEAACAGVWLHAEAGRGFGPGLIAEDLPELLPPLLREFFG"
     gene            complement(1965..3374)
                     /locus_tag="VHN20_04990"
     CDS             complement(1965..3374)
                     /locus_tag="VHN20_04990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018263236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase family protein"
                     /protein_id="HEX2725158.1"
                     /translation="MSLQRKNLPTRRRVIGGLAVSLATLARAQASSRSAPPSDGWREL
                     TAAPGSVRLRPDAASETPVWTFDGQVPGPTLRVRPGEQVRVRLRNQIERPLSLHWHGV
                     RNVSAMDGVGGLTQPPVAPGQSFDYRFTPPDAGTFLVRPLVIGGSSEPAERGLSALLV
                     VEERQPPKVDHEFALLVDDWRLGEDGALAPFGDPLEASAAGRLGNWLTVNGKGVPYEI
                     KVAPGARVRLRLANGCNARSLRIRFDNIKAYVAAVDGQPTDTFEPLRSTLPLAPGGRY
                     DLLFDAPANAGARNTVSAVLGPGIPLVVFVTEGDPARNAPSPMAALPENKQLPREIRL
                     QSALRRDVVIQGGAKAGPGGQPVYTGDPKRIWTINGVPGAAASPPLFTAKRGSPVVLS
                     LKNQTPVVQVMHVHGHAVRLLHLADDGWDPYWLDTVQIPENRTLLIAFVADNPGKWAL
                     SSAVLERFDTGLWTWFEVT"
     gene            3552..3636
                     /locus_tag="VHN20_04995"
     tRNA            3552..3636
                     /locus_tag="VHN20_04995"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3586..3588,aa:Leu,seq:tag)
     gene            3756..>4082
                     /locus_tag="VHN20_05000"
     CDS             3756..>4082
                     /locus_tag="VHN20_05000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012336214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor family protein"
                     /protein_id="HEX2725159.1"
                     /translation="MQVTETLSQGLKREFKVVLPATELEERLSSELATLKDRVRINGF
                     RPGKVPVQHLRRLYGRSVMADVVQNAVNEANRKIVDENGLKLALDPQIQFPENKDEVD
                     QAMDAKA"
BASE COUNT          657 a         1366 c         1413 g          646 t
ORIGIN      
        1 gccttgcgga tggcctccac ggcgctgtcg accatgtcgt cggccaaaac gatttcgagc
       61 ttcaccttgg gcaggaaatc gaccacgtat tcggcgcccc ggtagagttc ggtgtgccct
      121 ttctgacggc cgaacccctt ggcttcgatc accgtaatgc cctgtaagcc gacgtcctgc
      181 agggcctcct tcacctcgtc gagcttgaag ggctttatga tcgcttcgat cttcttcatc
      241 cggggacccg ttggtcaatt tccaagctgc tggcgcgcgt tcctgccgct cttagcatcg
      301 cggacagcca cgttccatgg ggttgtgagc gccgaagagt gatgggtgcg caaaaaggca
      361 tcagtatctg ccttaaaatt aggcagcctg aagccgtgat aagcagcttg cgccaatccg
      421 agccgcccgt ttgattacag atatgtcgga cctcctgacc aatgccgaaa tgcgggcggc
      481 ggacgctcgc accatcgctg ccgggacgcc cggctatgtc ctgatgcagc gcgccggtga
      541 ggccgtcgcc gaagccgcgc aacggatgct gggcggtgag ggcagcgtgc tcgtcctgtg
      601 cgggccaggc aacaatggtg gcgacggctt cgtcgcggcc cgtctcctgg cccggcgcgg
      661 ctacaatgtc gctgtcgcgc tccttggcaa ccccaataaa atccgcggcg atgcggcgct
      721 cgcccgttcg gagtggcgcg gcccggtggt cgcggcacac gagatcacgc cggcgcgtgc
      781 aggcctcctg gtagatgcgt tgctcggcag cgggctcgac cgcgacctcg aggacgaggc
      841 ccgggccgtg gtcgagcgca tcaatgccgc ccgccggccg gttctctcgg tcgacatccc
      901 gtcgggcatc gacggcgaca ccggccgggt caggggggcc gccgtgaagg cgacgcggac
      961 cgtgacgttc gcgacacgca agccgggcca tctgctgtac cccgggcggt cgcattgcgg
     1021 aacgctcgag gtggccgata tcggcatcag cgcggatacg atcgcgcaag tcggcggccg
     1081 cacctacgcc aaccatcccg acttgtggcg gcagcgcctg ccgcggccgc gggccgatgc
     1141 acacaaatat gagcgcgggc ataccctcgt gctgtcagga gatgcgacgc atagcggagc
     1201 tgcgcgcctc accgcgcggg ccgccctgcg ggccggttcg ggcctcgtca ccctggcgtc
     1261 cccgagcgat gcgcttgtcg tcaacgcggc ccagctcacg gctatcatgc tgcgtgcgtg
     1321 cgactggcct gctgacctgc aggggcttct ggctgacgcg cgcttcaacg cgctggcgct
     1381 cgggccggcg ctgggcatcg gcccacggac gcacgaattc gtcctgctgg cgctgcgatc
     1441 gggtcgggcg accgttctcg acgcggacgc gctgacgagc tttgccgccg aaccggccac
     1501 cctggccggc gagaccggcg ctggcgaccg gcccgtcgtg ctaaccccgc acgcgggcga
     1561 attcgcgcgc ctgttcgaaa gccgggtgga catcagcggg gcgacctcga agatcgaggg
     1621 cgcccgccgc gccgccgtct tcacgggcgc cctcatggtg ctcaaaggcc ccgataccgt
     1681 gatcgcggcc ccggacgggc gcgccgccat caacgagaac ggcgccccat ggctagccac
     1741 cgccgggtcg ggggatgtcc tgtccggcat catcggcggg ctgcttgcgc aagggatgcc
     1801 aggtttcgag gcagcctgcg ccggggtctg gctgcacgcc gaggccgggc gcggcttcgg
     1861 accgggcctg atcgccgagg atttgccgga actgctgccg ccgctgctgc gggaattttt
     1921 cggatgacac gcgccctgct caagcgggag aggtgtcgcg ccgctcaggt cacctcaaac
     1981 caggtccata gcccggtatc gaagcgctcc agcacggctg agctgagcgc ccatttgccg
     2041 ggattgtccg ccacgaaggc gatcagcaac gtccggttct cagggatctg caccgtgtcg
     2101 agccagtagg gatcccagcc gtcgtcggcg aggtgcagga gacgcacggc gtggccgtgc
     2161 acgtgcatca cctgaacgac aggcgtctgg ttcttcagcg acaggaccac cggcgagcca
     2221 cgcttggcgg tgaacagcgg agggctggcg gccgctcccg ggacaccgtt gatggtccag
     2281 attcgcttcg gatctcccgt gtagacgggt tggccgcccg gtccagcctt ggcgccgccc
     2341 tggatgacga catcgcggcg caaggcgctc tgcaaccgga tctcgcgcgg cagctgctta
     2401 ttctcgggca gggcggccat cggagacgga gcgttgcgag ccgggtcccc ctcggtcacg
     2461 aagacgacga gcgggatgcc ggggccgagc accgcgctga ccgtgttccg ggcgccggca
     2521 ttggccggtg cgtcaaagag gaggtcgtag cggcccccgg gcgccagggg cagcgtcgag
     2581 cgtagcggct cgaacgtatc ggtcggctga ccgtccaccg cagccacata ggccttgatg
     2641 ttgtcgaagc ggatgcgcag cgaacgggca ttgcagccat tggccagacg cagccgcacc
     2701 cgcgcaccgg gggcaacctt gatctcgtat gggacgcctt tgccgttcac cgtgagccag
     2761 ttgccgagcc ggccggcggc ggaggcctcc agggggtcgc cgaatggcgc cagggcgcca
     2821 tcctcgccga gccgccagtc gtcgaccagc agagcgaatt cgtggtcgac cttcggcggc
     2881 tgccgctcct cgacgaccag caacgccgac aagccgcgct cggcgggctc gctgctgccg
     2941 ccgatcacca gcgggcgcac caggaacgtg cccgcatccg gcggcgtgaa gcggtagtcg
     3001 aagctctgtc ccggtgcgac cggcggctgg gtcaggccgc cgacgccgtc catggcgctg
     3061 acgttgcgga ccccatgcca gtgcaacgac agcggacgct cgatctggtt gcgcaggcgc
     3121 actcgcacct gctcgcccgg gcgcacgcgc aatgtcggtc ccggcacctg tccgtcgaag
     3181 gtccatacgg gggtttcgct tgccgcgtcg ggccgcaggc gaacgctgcc cggcgcggct
     3241 gtgagctcgc gccaaccgtc cgacggcggc gctgagcgag acgaagcctg tgcccgcgcc
     3301 agagtggcaa ggctcacggc gaggccgccg atcacgcggc gtcgggtcgg gagattctta
     3361 cgctgcaacg acataccttt cgccgcgggt agggggcacc aggggaacac gagatgacgc
     3421 cgatcggacc cgcgtgacaa tgcgcgacgg acgcggaacg atgccgggtc acgcaaattt
     3481 tttccgtgca cgccatatcg aacatgttat agagccggcg cccggcagag aggcctcgtg
     3541 ccgcctcccg agcgggcgtg gcggaattgg tagacgcgct ggatttaggt tccagtgacg
     3601 aaagtcgtgg gggttcgagc ccctccgccc gcaccaatcc cgccgacggg tttggtagtc
     3661 cggatggttc ccggttcggc ggtggggcgg cggtatcgcc cgggccggcc cgaatgccat
     3721 ccaaacgtct tcaagcgagt gaaagtgatc cgactatgca ggtgacggaa accctgtccc
     3781 aagggctgaa gcgcgaattc aaggtggtgc tgccggcgac cgagctcgag gagcggctgt
     3841 cgagcgagct ggcgacgctc aaggatcgcg tgcgcatcaa cggcttccgg cccggaaagg
     3901 tgccggttca gcatctgcgc cggctctacg gccgctcggt gatggccgac gtggtccaga
     3961 acgccgtcaa cgaggccaac cgcaagatcg tcgacgagaa cggtctcaag ctcgcgctcg
     4021 acccacaaat ccaatttccg gagaacaagg acgaagtcga ccaggccatg gacgccaagg
     4081 ct
//
LOCUS       DATAIQ010000291         3402 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_14967, whole genome shotgun sequence.
ACCESSION   DATAIQ010000291 DATAIQ010000000
VERSION     DATAIQ010000291.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3402)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3402)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3402
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_14967"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..337)
                     /locus_tag="VHN20_05005"
     CDS             complement(<1..337)
                     /locus_tag="VHN20_05005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018065875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HEX2725160.1"
                     /translation="MLTAEENDLLCRVEGDTPMGHLMRRHWVPAVLSEQLVEPDGTPV
                     RVRLFGEDLVAFRDSDGRLGVLGEYCAHRKASLALGRNEECGLRCLYHGWKFDVDGNV
                     LEMASEPAES"
     gene            535..1503
                     /locus_tag="VHN20_05010"
     CDS             535..1503
                     /locus_tag="VHN20_05010"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017404442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PDR/VanB family oxidoreductase"
                     /protein_id="HEX2725161.1"
                     /translation="MPVDNAEADMTLLRVHEIEQAAEGIFTFDLRRPDGSELLEFTSG
                     SHVSLRVPNGLIRKYSLCNDPAERDRYVIGVRRDPDGRGGSVSLIDHTSPGDELPVSA
                     PRNDFKLVRSAAGYIFVAGGIGITPIMSMIRHLKSTGGGRFKLYYLTRSPEMTAFREE
                     LSGPEFRGQVSIHHDHGDPQKSFDLWPVFEQPKGQQIYCCGPRALMEAVRDMTGHWSS
                     SAVHFEAFNEPARSTAEDKPFKVRLARSGGVIEVPVGTTILEALRAHGVEVPSSCESG
                     TCDTCRTRLLEGEADHRDLVLADHERADNIMVCVSRARSDELVIDR"
     gene            1513..2733
                     /locus_tag="VHN20_05015"
     CDS             1513..2733
                     /locus_tag="VHN20_05015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018065873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEX2725162.1"
                     /translation="MTQRKLRLGVAGLGRAFSVMLPTLSADPRVELVAGADPRAEARH
                     RFGADFGARTYASVEELCADDRVEAVYVATPHQFHPDHVAIATRHGRHVLVEKPMALT
                     IADCSAMIEAAETARVQLVVGHSHSFDAPIRRTREIVESGTVGAVRMITAFNYTDFLY
                     RPRRPEELVTAQGGGVIFNQAAHQIDIVRLLGGGRVRSVRAATGAWDAARPTEGAYTA
                     MLIFEDGAFASVVYSGYAHFDSDEMCGWISEMGQAKDPTAYGAARKMLQGVSSPEEET
                     ALRNARGYGAAAAPSPVRAGSKAASHQHFGVVVVSCEGADLRPLPNGVMIYDDAAARL
                     EPLPPPDVPRSEVIDELYDAIVGNRAPVHDGAWALATTEVCLAVLQSAREQKEVFLQH
                     QVAPARQERQGVRP"
     gene            2730..3338
                     /locus_tag="VHN20_05020"
     CDS             2730..3338
                     /locus_tag="VHN20_05020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017404454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEX2725163.1"
                     /translation="MKRSKSRSEEAATEAILRHWREAVPDDRLAHLVKDATRALLRAL
                     QMRLTEHSVSLGHWTFLRILWETDGLSQRELSHQAGVMEPTTSAALKAMEKLGYITRT
                     QRPGNRKKVHIFLTPAGRALKRKLVPLAEEVNQIAVAGVAPAAVAATRQTLLAMIENL
                     ARDEAESTHAARRIPSTRELSRLVEEAGSRRRPKASRPSSSG"
BASE COUNT          569 a         1178 c         1147 g          508 t
ORIGIN      
        1 cgctttccgc cggctccgag gccatctcga ggacgttgcc gtccacgtcg aatttccagc
       61 cgtgatagag gcagcgcagc ccgcattcct cgttgcggcc gagggccaac gaagccttgc
      121 ggtgcgcaca gtattcgccg agcacgccga ggcgtccgtc gctgtcgcgg aaggcgacga
      181 gatcctcacc gaacaggcgc acgcgaaccg gcgtcccgtc gggctcgacg agctgctcgg
      241 acagcaccgc cggcacccag tgacggcgca tcagatgtcc catcggggta tcaccctcga
      301 cccggcacaa gaggtcgttt tcctcggcgg tcagcatggg tttcctcctg ggggccggag
      361 cgtccgggcg gcttccacca cgcacgtcgc tcgacagtct tagctctcta agatatatta
      421 gctgaagtcc ggggcggctg tcgagagcgt ccggcggagc ggcgcatgcc cgcccgcagc
      481 cgagcgacaa aaccccgcta atcgaccatc cgcacgtttg cctcaggaac gttcatgcct
      541 gtcgataacg ccgaagcgga catgacgttg ctccgcgtgc acgagatcga gcaggccgcc
      601 gagggcatct tcacgttcga tctgcgcagg ccggacggtt cggaactgct tgaattcaca
      661 agcggttcgc atgtcagcct gcgggtgccg aacggcctga tccgcaaata ttccctgtgc
      721 aacgacccgg cggaacggga ccgttatgtg atcggggtgc ggcgcgaccc cgatgggcgc
      781 ggcggctccg tcagcctgat cgaccatacc agccccggcg acgagctgcc cgtctccgca
      841 ccgcgcaacg acttcaagct ggtcaggagc gcagccggat acattttcgt cgcgggcggc
      901 atcggcatca cgccgatcat gtcgatgatc cggcacctca agagcacggg cggcggtcgc
      961 ttcaagctct attacctcac ccgcagcccg gaaatgacgg cgttccgcga ggagctgagc
     1021 ggaccggaat tccgcgggca ggtcagcata caccacgatc acggcgatcc gcaaaagtcg
     1081 ttcgacctgt ggccggtctt cgagcagccg aagggccagc agatctattg ctgcggtccg
     1141 cgcgcgctca tggaagcggt ccgcgacatg accgggcact ggtcgtcgtc ggccgtgcat
     1201 ttcgaagcct tcaacgagcc ggcgcgcagc accgccgagg acaagccgtt caaggtgcgg
     1261 ctggcgcgct cgggcggcgt catcgaggtg ccggtcggaa ccaccatcct cgaagccctg
     1321 cgggcgcatg gcgtcgaggt gccgagctcg tgcgaaagcg gcacctgcga cacgtgccgc
     1381 acccggcttc tcgagggaga agccgatcat cgcgacctcg tcctcgccga ccatgagcgc
     1441 gccgacaaca tcatggtctg cgtctcgcgc gcccgctcgg acgagctcgt catcgaccgc
     1501 taggcgccgc acatgacgca acggaagctg aggctggggg tcgctgggct gggccgggct
     1561 ttttcggtga tgctgccgac gctgtcggcc gacccgcgcg tcgagctcgt ggccggcgcc
     1621 gacccgcgcg ccgaggcgcg ccaccggttc ggggcggatt tcggcgcccg cacctacgcc
     1681 tccgtcgagg aactgtgcgc cgacgaccgg gtcgaggcgg tctacgtcgc cacaccgcat
     1741 caattccatc ccgaccacgt ggccatcgcc acgcgccacg gccggcacgt tcttgtcgag
     1801 aagccgatgg ctctcaccat cgccgattgc agcgcgatga tcgaggccgc cgaaaccgct
     1861 cgggttcagc tcgtggtcgg gcatagccac agtttcgacg cgccgatccg ccggacgcgc
     1921 gagatcgtcg agagcggcac cgtgggcgcc gtgcgcatga tcacggcctt caattacacc
     1981 gacttcctct atcgcccgcg ccggccggaa gagctcgtca ccgcgcaagg gggcggcgtg
     2041 atcttcaacc aggcggcgca ccagatcgat atcgtgcgcc tgcttggcgg cggacgggtg
     2101 cgcagcgtgc gcgccgcgac cggcgcctgg gatgcggcgc gcccgacgga aggcgcctat
     2161 acagccatgc tgatcttcga ggacggcgcc ttcgcgtcgg tcgtctacag cggctacgcc
     2221 catttcgatt ccgacgaaat gtgtggttgg atcagcgaga tgggacaggc gaaggacccg
     2281 accgcttacg gcgccgcgcg caaaatgctt cagggtgtgt cgagtcccga ggaggagacg
     2341 gcgctgcgca acgcacgcgg ctacggcgcc gccgcagccc cctcccctgt gcgcgcgggc
     2401 agcaaggcgg cgtcccacca gcacttcggc gtcgtggtcg tgtcgtgcga gggggccgac
     2461 ctgcgtccgc tgccgaacgg ggtcatgatc tacgacgacg ccgcggcgcg cctcgagccg
     2521 ctgccgccgc cggacgtgcc gcgtagcgag gtcatcgacg agctttacga tgcgatcgtc
     2581 ggcaaccgcg cgccggtcca tgacggcgca tgggccctgg cgacgacgga ggtgtgcctc
     2641 gccgtgctgc aatcggcgcg cgaacagaag gaagtgtttc tgcagcacca ggtcgcgccg
     2701 gcgcgccagg aacgacaggg ggtgcgcccg tgaagcgcag caaatcacgc tccgaggaag
     2761 ccgccaccga ggcgatcctg cgccactggc gcgaggcggt gcccgacgac cgcctggcgc
     2821 acctcgtcaa ggacgcgacc cgcgcgctgc tccgcgcgtt gcagatgcga ctcaccgagc
     2881 attcggtgtc cctgggtcat tggaccttcc tgcgcatcct gtgggagacg gacgggctca
     2941 gccagcgcga gctcagccac caggcgggcg tgatggagcc gaccacctcc gcggccctga
     3001 aggcaatgga gaagctcggc tacatcacgc gcacgcagcg ccccggcaac aggaagaagg
     3061 tgcacatctt cctgacccct gccgggcgcg ccctgaagcg caagctcgtt ccgctcgccg
     3121 aggaggtcaa ccagatcgcc gtcgcgggcg tggcgcccgc cgccgtcgcc gcgacgcgcc
     3181 agaccctgct cgccatgatc gagaacctgg cgcgggacga ggccgagtcg acgcacgcag
     3241 cgaggcgcat cccgtcgacg cgcgagctgt cgcgcctggt cgaggaagca ggcagccgcc
     3301 gacgcccgaa ggcttcgcgg ccgagttcct ccgggtgaca ggccgtttcc ccccgagagg
     3361 gaacggagtc gctgccgaga gcgccgttag ggagctatct tg
//
LOCUS       DATAIQ010000292         2301 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_14982, whole genome shotgun sequence.
ACCESSION   DATAIQ010000292 DATAIQ010000000
VERSION     DATAIQ010000292.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2301)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2301)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2301
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_14982"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            94..1203
                     /locus_tag="VHN20_05025"
     CDS             94..1203
                     /locus_tag="VHN20_05025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006934948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alkene reductase"
                     /protein_id="HEX2725164.1"
                     /translation="MRGDTFSEGQGLFSQADLGPYRLRNRAAMAPMTRNRAGADGVPT
                     PMMAEYYAQRAEAGLIITESTQVSPQGRGYPGTPGIHDDAQVEAWAAVVAAVHARGGL
                     IFVQLWHAGRQSHPLVQPDGVLPVAPSAIAPDGMTVTGEGMKPFVAPRALETAEIAQV
                     VAEFRAAAENARRAGFDGVEINAANGYLIDQFLRDGSNRRDDRYGGSPQNRARFLIEI
                     VESVTAILDPQQVGVRLSPTNPFGSMSDADPSTTFGHAAAALNGRGLAYLHGREAGQT
                     DFDWAAWRRRFQGPYIANGGYDLERAQAAIASGSADLVSFGALYLANPDLLERFRRRA
                     PLNAPDKSTFYGGGARGFTDYPLLTELEPSRSGPG"
     gene            1284..>2301
                     /locus_tag="VHN20_05030"
     CDS             1284..>2301
                     /locus_tag="VHN20_05030"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEX2725165.1"
                     /translation="MTALAALSLLSLAVNDAAQAQGAADFFRGKEITIGIPSDAGGGY
                     DATGRLIAQYLPKYIPGNPRIIPQNNPAGGGLVLVNLLYNTAPKDGTYIGIIRGSALY
                     EEIFNNPAVKFESLKLNWLGNFSRTQDGCVFSQNSGVSSPQDLFKREITIGASGVGAQ
                     AYSLPKIYNDLLGTKFKIIVGYKGSGDRVLAMERGELEGACGITTGTLRSSFAGPVKE
                     GKIKIVAQAGLSKDEALPDVPNILDLAKTAEQRRALEFLFAQLDLGRAVAAPPGVPAE
                     RVKILREAFEQMLKDPGLAADVKRMQLDFDPMSAAATIEMIEHFFATPKPIVEQIRVA
                     LTAKK"
BASE COUNT          406 a          788 c          759 g          348 t
ORIGIN      
        1 cagcggagtg atgacggcaa ggcgcgtcgc aagttcgttc acgtgaaccg gaacgatgac
       61 accggaccct ctccgcaccg ggcggagggc agggtgaggg gggacacgtt ttcggaaggg
      121 cagggcctgt tctcgcaggc cgatctcggt ccttaccggt tgcgcaaccg cgccgccatg
      181 gcgccgatga cacgcaaccg cgccggcgcg gatggcgtgc cgacgccgat gatggcggag
      241 tattacgcgc agcgtgccga agctggcctg atcatcactg agtcgacgca ggtgtcgccg
      301 cagggcaggg gctatccggg cacccccggc atccacgatg acgcgcaggt cgaggcctgg
      361 gccgcggtcg tcgcagccgt gcatgcgcgc ggcggcctga tcttcgtgca gctgtggcat
      421 gcaggccgcc agtcgcatcc gctggtccag ccggacggcg tgctgccggt ggcgccgtcc
      481 gcgatcgcgc ccgacggcat gacggtcacc ggcgagggca tgaagccctt cgtcgcgccg
      541 cgcgcgctcg agaccgccga aatcgcgcaa gtcgtcgccg agttccgtgc ggccgccgag
      601 aatgcgcggc gcgcaggatt cgacggcgtc gagatcaacg ccgcgaacgg ctacctgatc
      661 gaccagttcc tgcgcgacgg ttccaaccgg cgtgatgacc gctatggcgg ctcgccccaa
      721 aaccgcgcgc gattcctgat cgagatcgtc gagagcgtca ccgcgatcct ggacccgcag
      781 caggtcggcg tgcgcctctc gccgacaaac ccgttcgggt cgatgagcga cgccgacccg
      841 tcgacgacat tcggccacgc cgccgccgcc ctgaacggcc gcgggctcgc ctacctgcac
      901 ggccgcgagg ccgggcaaac ggacttcgac tgggcggcct ggcggcgccg gttccagggc
      961 ccctatatcg ccaacggcgg ctacgacctg gagcgggcac aagcggcgat tgcgtcgggt
     1021 tccgccgacc tcgtctcgtt cggcgcgctg tatctcgcca atcccgatct tctcgaacgc
     1081 ttccgccgcc gggcgcccct caatgcgccc gacaagagca cgttctatgg cggcggcgcg
     1141 cgcggcttca cggattaccc gctcctgacg gagctcgagc cgagccgttc ggggccaggt
     1201 tgactcaggt gcggcttctc tgatcagaac gcttcaaaca agaccaaaac ggaggatcgc
     1261 cgatgaggat caggaacttt tgggtgaccg cgttggccgc gctgagcctg ctgtccctcg
     1321 ccgtcaacga cgcggcgcaa gcgcagggag cggcagactt cttccgcggc aaggagatca
     1381 ccatcggcat cccgagcgac gccggcggcg gctacgacgc aacgggccgg ctgatcgccc
     1441 agtacctgcc gaaatacatt cccggcaatc cgcgcatcat cccgcagaac aatccggcgg
     1501 gcgggggcct cgtcctcgtc aacctgctgt acaacaccgc tcccaaggat ggcacctata
     1561 tcggcatcat ccgcggcagc gcgctctacg aggagatctt caacaatccc gccgtcaagt
     1621 tcgagagcct caagctcaac tggctcggca atttcagccg cacccaggac ggctgcgtgt
     1681 tctctcagaa ctccggcgtc agcagtccgc aggatctgtt caagcgcgag atcacgatcg
     1741 gcgcgagcgg cgtcggcgcg caggcctatt ccctgcccaa gatctacaac gacctgctcg
     1801 gcaccaaatt caagatcatc gtcggctaca aaggctccgg cgaccgcgtc ctggcgatgg
     1861 agcgcggcga gctcgaaggc gcctgcggca tcaccaccgg aaccctgcgc tcgagcttcg
     1921 cggggcccgt caaggaaggc aagatcaaga tcgtggcaca ggccggcctg tcgaaggatg
     1981 aggcgttgcc cgacgtgccc aatatcctcg acctggcgaa gactgcggag cagcgccgcg
     2041 cgctcgaatt cctgttcgcg cagctcgatc tcgggcgcgc ggtggcggca ccgccgggcg
     2101 tgccggcgga acgcgtcaag atcctgcgcg aggccttcga gcagatgctc aaggacccgg
     2161 gccttgccgc cgacgtcaag cggatgcagc tcgatttcga tccgatgagc gcggcggcga
     2221 cgatcgagat gatcgagcat ttcttcgcga cgccgaagcc gatcgtcgag cagatccgcg
     2281 tggcgctgac ggcaaagaaa t
//
LOCUS       DATAIQ010000293         1588 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_107220, whole genome shotgun sequence.
ACCESSION   DATAIQ010000293 DATAIQ010000000
VERSION     DATAIQ010000293.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1588)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1588)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1588
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_107220"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..877
                     /locus_tag="VHN20_05035"
     CDS             <1..877
                     /locus_tag="VHN20_05035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018259800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF58 domain-containing protein"
                     /protein_id="HEX2725166.1"
                     /translation="EGLSLADHMPRLILEARRVAAALSHGIHGRRRAGPGETFWQFRP
                     FVAGEAAQRVDWRRSGRDDRLYVREREWETAQSVWMWIDRSASMGYASDLAQASKIER
                     ALVLGLALADTFVEGGERVGLLGLMPARASRQIAEKVAEALVGDPPGLDDDLPPRAPI
                     GRFDEAILISDFLSPVAEIGAVLEAISGRGAHGHLVMIVDPVEETFPFSGQALLHDLE
                     VGVQLRVGDAGSWGSAYRERIGLHREAIADLTRRRGWTMTVHHTDRPASEAALRIMTL
                     LAASRGRTLAPVLGG"
     gene            884..>1588
                     /locus_tag="VHN20_05040"
     CDS             884..>1588
                     /locus_tag="VHN20_05040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012334212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BatA domain-containing protein"
                     /protein_id="HEX2725167.1"
                     /translation="MLGLPLTFAAPLVLGALAALPAIWLLLRVTPPQPRRIAFPPLRI
                     LMDLLPRRETPARTPWWLLLLRLTIAALVIIAAAGPIWNPVASSGSRTPVLLVLDNGF
                     TAAHDWRERSALAIERAETAAREGRVVAAVATADRPAEIQTQNPAAAIERLRALKPQP
                     FLPDRRAHLESLERFFGATPDAEIVWISDGVSGVDGQAFIEGMTRMSGGRPVTVFKID
                     RAPALALAGAENAASHL"
BASE COUNT          202 a          578 c          555 g          253 t
ORIGIN      
        1 ggaaggcctg tcgctggcag atcacatgcc acggctgatc ctcgaggcgc gccgcgtggc
       61 ggcggcgctg tcgcatggca tccacggccg ccggcgcgcg gggcccggcg aaaccttctg
      121 gcaattccgc ccgttcgttg ccggcgaggc cgcgcagcgc gtcgactggc ggcgctcggg
      181 ccgcgacgac cgtctgtatg tccgcgagcg cgaatgggag acggcccaga gcgtgtggat
      241 gtggatcgat cgctcggcct cgatgggtta cgcctccgac ctggcccagg cgtccaagat
      301 cgagcgcgcc ctggtgctcg ggctggcgct tgccgacacc ttcgtcgaag gcggcgagcg
      361 cgtcgggctc ctggggctca tgccggcgcg cgcctcgcgc cagatcgccg agaaagtggc
      421 ggaagccctg gtcggcgacc cgcccggcct cgacgacgac ctgccgccgc gcgccccgat
      481 cggacgattc gacgaggcca tcctgatcag cgactttctt tcgcccgtcg ccgagatcgg
      541 cgcggtgctg gaagccattt ccgggcgcgg cgcgcacggc catctcgtga tgatcgtcga
      601 tccggtcgag gagacgttcc cgttttccgg ccaggcgttg ctgcacgacc tcgaggtcgg
      661 cgtgcagctg cgcgtcggcg acgccggatc gtggggcagc gcctatcgcg agcgcatcgg
      721 gctgcatcgc gaagccatcg ccgatctgac gcgccgccgc ggctggacga tgacggttca
      781 tcacacggac cggcctgcca gcgaagccgc gctccgcatc atgacgcttc tggccgcctc
      841 gcgcggccgg acgctggcac cggtgctggg aggctgatcg gcgatgctcg gcctgcctct
      901 gacctttgcg gcccctctcg ttctcggggc cctcgccgcg cttccggcca tctggctgct
      961 gttgcgcgtg acgccgccgc agccgcgccg catcgccttc ccgccgctgc gcatcctgat
     1021 ggacctgctg ccgcggcgcg agacgccggc gcgcacgccg tggtggctgc ttctgctgcg
     1081 cctgacgatc gccgcgctcg tcatcattgc cgccgccggc ccgatctgga atccggtggc
     1141 gagcagcggc agccgcaccc ctgtcctgct ggttctcgat aacggcttca ccgctgcgca
     1201 cgattggcgc gagcgctccg cgcttgccat cgaacgcgcc gagacggcgg cgcgcgaagg
     1261 acgcgtagtc gccgcggtcg ccaccgccga ccgcccggcg gagattcaga cgcaaaaccc
     1321 ggccgcggcg atcgagcgcc tgcgagccct caagccgcag ccgttcctgc ccgacaggcg
     1381 cgcgcatctc gaatcgctcg agcgcttttt cggcgccacg cccgacgccg agattgtgtg
     1441 gatcagcgac ggcgtgtccg gcgttgatgg tcaggcgttc atcgaaggga tgacccggat
     1501 gtcaggcggc cgcccggtca cggtgttcaa gatcgatcgg gctccggcgc tggcgcttgc
     1561 cggcgccgag aatgccgcca gccatctc
//
LOCUS       DATAIQ010000294         1918 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_145651, whole genome shotgun sequence.
ACCESSION   DATAIQ010000294 DATAIQ010000000
VERSION     DATAIQ010000294.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1918)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1918)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1918
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_145651"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..199)
                     /locus_tag="VHN20_05045"
     CDS             complement(<1..199)
                     /locus_tag="VHN20_05045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012318731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HEX2725168.1"
                     /translation="MGELTAQIIQRGRGADTKEVARRRKIAQDVRSAREKLTSSIGLE
                     RAFDYELVRLFAEYRFGGSVLL"
     gene            453..950
                     /locus_tag="VHN20_05050"
     CDS             453..950
                     /locus_tag="VHN20_05050"
                     /inference="COORDINATES: protein motif:HMM:NF012774.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HEX2725169.1"
                     /translation="MRRLDALVATLLLIGLVAGAAWLLQPEDLVAGFASAVDGDSLRL
                     DGKDIRIAGIDAPELRQSCLGEGRRAYPCGEVARKALSEMIAGRLVTCRVSGRDRYRR
                     RLASCEAGGEDVGAALVARGFALAYGRYEREEAAARDKKLALWSGSFEPPAQWRKTHS
                     EERGS"
     gene            1198..>1918
                     /locus_tag="VHN20_05055"
     CDS             1198..>1918
                     /locus_tag="VHN20_05055"
                     /inference="COORDINATES: protein motif:HMM:NF024118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX2725170.1"
                     /translation="MRLTVVGCGDAFGSGGRANTCFLVESGDVTLALDFGATSLVAMR
                     KLGLDPNRIDVVMLSHLHGDHFGGLPFLLLHGQFDGAREKPLTVIGPVGTAERLHAAM
                     EVFFPGSSRNKWRYPLTVVDLPCRTAHRFGHFEIETHEVVHPSGAPSTGVRVSDGARL
                     LAYSGDTMWTEALFDIARGASLFIIECYKLSAAPPNHLDFETIAANRARFETPRVMLT
                     HMTDAVLARLADLEAKGYLTAH"
BASE COUNT          314 a          655 c          640 g          309 t
ORIGIN      
        1 acaggaggac cgagccgccg aagcgatatt cagcgaacag gcgcaccagc tcgtaatcga
       61 atgcccgctc gagcccgatc gaggacgtga gcttttcccg ggcggagcgc acgtcctgcg
      121 cgatcttgcg gcggcgggcg acctccttcg tgtcggctcc ccgaccgcgt tggatgatct
      181 gcgccgtcaa ctcgcccatg gtctcacgca atacgccggc cgcgaaaacc gtcggccccg
      241 cggtagccca tcatggcttg caaaaggtta atctcccttt cacgcagctc tcgcgagccg
      301 agccaaccga gcggcgggcg ggcaaaaggg gcgtggtcga ttcagatcga atgatcccgc
      361 tccaaactcc ttgagtcgga ggatcttttc cggcgaagtg gtatgcaccg cccggatcaa
      421 tccggggcag gctttcgccg gatcatgcgc tgatgagacg gctcgacgcc ctcgtcgcca
      481 cgctgctgct gatcggactg gtcgccggcg ccgcctggct gctgcagccg gaagatctcg
      541 tcgccggctt cgccagcgcc gtcgacggcg attccctccg gctggacggc aaggacatcc
      601 gcattgccgg gatcgatgcg cccgagctcc gccagagctg cctcggcgag gggcgccgcg
      661 cctatccgtg cggcgaggtt gcccgcaagg ccttgagcga gatgatcgcc ggccggctgg
      721 tgacctgccg ggtcagcgga cgcgaccgct accgccgccg tctagcctcg tgcgaggccg
      781 gaggagagga tgtcggggcg gccttggtgg cgcggggctt cgcgctcgcc tatggccgct
      841 acgaacgaga ggaagctgcg gcccgggaca agaagctggc gctgtggtca ggctcgttcg
      901 agccccccgc gcaatggcgc aagacgcatt ccgaggaacg cggcagctga gcccgccgcg
      961 cccggatgaa gcgcgatcga agcctgcgag cgcaaaaatc atcgcgtgac agcttcggtt
     1021 cggcgcaaat cccgcgcgtc acggcttgac aagcaaagcg cgcgggagtg aacgaacacg
     1081 acaatccatg cgtggccaaa ccacgcgtgt cgcgtgcgac gacctggggg gcagcatgtc
     1141 gcgacctgtc gccggctcga agcggctcgc cgcgcggcag tccttgcgat gagccagatg
     1201 cgcctcacgg tcgtcggctg cggcgacgcc ttcgggtccg gcggccgggc caatacctgt
     1261 ttcctggtcg aaagcggcga cgtcacgctg gcgctcgact tcggcgcgac ctccctcgtc
     1321 gccatgcgca agctcgggct cgacccaaac cgcatcgacg tcgtcatgct cagccatctg
     1381 catggggatc atttcggcgg cctgccgttc cttctgctcc acggccagtt cgacggcgcg
     1441 cgcgagaagc cgctcacggt gatcggcccc gtcggcacgg cggaacggct gcacgccgcc
     1501 atggaggtgt tcttcccggg ctcgtcgagg aacaaatggc gctatccgct gaccgtggtg
     1561 gacctgccgt gccgcacggc gcatcggttc ggccatttcg agattgagac gcacgaagtg
     1621 gtccacccgt ccggcgcgcc ctcgaccggc gtgcgcgtca gcgacggggc gcgtctcctc
     1681 gcctattcgg gcgatacgat gtggacggag gcgctgttcg acatcgccag gggcgcatcg
     1741 ctgttcatca tcgaatgcta caagctcagc gcggcgccgc cgaaccatct cgacttcgaa
     1801 accatcgccg ccaatcgggc gcgcttcgag acgccgcgcg tgatgctgac gcacatgacc
     1861 gacgcggtgc ttgcccgcct cgccgatctc gaggcgaaag gctatctgac cgcgcatg
//
LOCUS       DATAIQ010000295         2395 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_237762, whole genome shotgun sequence.
ACCESSION   DATAIQ010000295 DATAIQ010000000
VERSION     DATAIQ010000295.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2395)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2395)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2395
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_237762"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1492
                     /locus_tag="VHN20_05060"
     CDS             <1..1492
                     /locus_tag="VHN20_05060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725171.1"
                     /translation="ALILLAMLPLLYPDVPPLVDLTGHMGRYRVEMDLAISPELQRFY
                     GFHWRPIGNLGVDLIVAPLGRLVGLEPAVKLIVLSIPPLTVAGLLWVAREVHHKLPPT
                     AVFALPFAYGFPFLFGFVNFALAMALALLAFALWLRLARQDRDGLRALLFVPISFAVF
                     FAHAFGWGMLGLLCFSAEAVRLHDRGEAWFRAGLKAALHAAVLALPLLVILSWRSGTS
                     GELTHGWFDWPKKWLWVYSALRDRWQWFDIAAVVAVGLVLLFAFAHRRLEYSRNLAFS
                     ALVLVAAFLLLPWTMFGSAYADMRMVPYVFALAVIAIRFRGETDRRLAGLLAGLALAL
                     FLVRLAGTTASLAIASRDQQQKLEALDHLPAGARLVHFAGQKCAEKWALPRNSHLGGM
                     ALVRRRAFSNEQWAIAGANLLEVRFREAGRFRSDPSQIVREPACATAARWSADSALAA
                     IPPGVFDYAWLIDMPQYDPRLTAGWTLVWSGPGSLLYRLPESREGK"
     gene            1492..>2395
                     /locus_tag="VHN20_05065"
     CDS             1492..>2395
                     /locus_tag="VHN20_05065"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011923426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEX2725172.1"
                     /translation="MRPGLSIVVPCFNEQECLPALHQRLSAAARSAVGDDYELVLVND
                     GSSDRSWPIIQALAEGDPRLLAVNLSRNHGHQLALTAGLDLARGDRVLIIDADLQDPP
                     ELLGAMLETMEREAADVVYGVRSARAGETRFKRATAAAFYRLLARATEVDIPVDAGDF
                     RLMSRRALDALLAMPEQARFIRGMVAWIGFRQVPFAYQRDERFAGVTKYPLRKMIRFA
                     LDALTGFSSAPLKLPSHAGLWLAAGSVILIGYIAWSWASGETIQGWTSLMLVVVVLGA
                     MLETMEREAADVVYGVRSARAGETR"
BASE COUNT          285 a          857 c          800 g          453 t
ORIGIN      
        1 ggcgctgatc ctgctggcga tgctgccgct gctctatccg gacgtcccgc cgctggtgga
       61 cctcaccggc cacatgggcc gctaccgggt cgagatggat ctcgccatct cgccggaatt
      121 gcagcgcttc tacggcttcc actggcggcc gatcggcaac cttggcgtcg acctcatcgt
      181 cgcgccgctc ggacggctgg tgggcctcga gcccgccgtg aagctgatcg tcctgtcgat
      241 cccgccgctg accgtcgccg gcctgttgtg ggtggcccgt gaagtccatc acaaattgcc
      301 gccgacggcg gtgttcgctt tgcccttcgc ctacggtttc ccgttcctct tcggcttcgt
      361 caatttcgcg ctggcgatgg cgctcgcact gctggccttc gcattgtggc tgcggctcgc
      421 gcggcaggat cgcgacgggc ttcgcgcgct gctgttcgtg ccgatctcct tcgccgtctt
      481 cttcgcccat gccttcggct gggggatgct cggcctgctc tgcttctcgg cggaggcggt
      541 ccgccttcac gaccgcggcg aggcctggtt ccgcgcggga ttgaaggcag cgctgcacgc
      601 cgcggtgctc gctttgccgc tgctggtcat cctgtcgtgg cgcagcggca cgtcgggcga
      661 actcacccac ggctggttcg actggccgaa gaaatggctg tgggtctatt ccgcgctgcg
      721 cgaccgctgg caatggttcg acatcgcggc ggtcgtcgcg gtcgggctgg tgctattgtt
      781 cgcattcgct caccgccgcc tcgaatactc gcgcaacctc gccttttcgg ctctggtgct
      841 ggtggcggcc ttcctgctgc tgccgtggac gatgttcggc tcggcctatg ccgacatgcg
      901 catggtgccc tacgtgttcg cgctcgcagt gatcgccatc cgctttcggg gagagaccga
      961 ccggcggctc gccggcctgc tcgccgggct cgcgcttgcg ctgttcctgg tccgcctcgc
     1021 cgggaccacg gccagcctgg cgattgcgtc gcgcgaccag cagcagaagc tcgaagcgct
     1081 cgaccatctt ccggcgggcg cccggctggt ccacttcgcc ggccagaaat gcgccgagaa
     1141 gtgggcgctg ccgcgcaact cgcatctggg gggaatggcg ctggtccggc gccgcgcctt
     1201 ttccaacgag caatgggcga ttgctggcgc gaacctgctc gaggtccgtt tccgggaagc
     1261 tggccgtttc cgctcggacc cgtcgcagat cgtccgcgag ccggcctgcg cgaccgccgc
     1321 gcgctggtcg gccgacagcg cgctcgcggc cattccgccg ggcgtgttcg actatgcgtg
     1381 gctgatcgac atgccccaat acgatccgcg cctcaccgcc ggctggacgc tcgtgtggag
     1441 cgggcccggc tcgctgctat accggcttcc cgaatcgcgc gaggggaagt gatgaggccc
     1501 ggcctgtcga tcgtcgtgcc ctgcttcaac gagcaggagt gccttccagc cttgcaccag
     1561 cgcctctcgg cggccgcccg ctccgcggtg ggcgatgatt atgagctggt gctggtcaac
     1621 gacggatcga gcgaccgcag ctggccgatc attcaggctc tcgccgaagg cgacccgcgc
     1681 ctcctcgccg tcaatctctc gcgcaatcac ggccaccagc tggccttgac cgccgggctc
     1741 gacctcgcgc gcggcgacag ggtgctgatc atcgacgccg accttcagga cccgcctgag
     1801 ctgctcggcg cgatgctcga gactatggag cgcgaagccg ccgacgtggt ctatggcgtg
     1861 cgctccgccc gcgccggcga gacgcgcttc aagcgcgcca cggccgccgc cttctaccgg
     1921 ctgctggcgc gggcgaccga ggtcgacatc ccggtcgacg ccggcgactt ccgcctgatg
     1981 agccgccgcg ccctcgacgc gctgctggcg atgccggaac aggcgcgctt catccgcggc
     2041 atggtcgcct ggatcggctt ccgccaggtg ccgttcgctt accagcgcga cgagcgcttc
     2101 gccggggtca ccaaatatcc gctgcgcaag atgatccgct tcgcgctcga cgcgctgacc
     2161 ggattctcgt ctgcgccgct gaagctcccc agccacgccg gcctgtggct ggccgccggc
     2221 tctgtcatcc tcatcggcta catcgcctgg tcgtgggcca gcggggagac gatccagggc
     2281 tggacctcgc tgatgctggt cgtcgtcgtg ctcggcgcga tgctcgagac tatggagcgc
     2341 gaagccgccg acgtggtcta tggcgtgcgc tccgcccgcg ccggcgagac gcgct
//
LOCUS       DATAIQ010000296         1780 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_15226, whole genome shotgun sequence.
ACCESSION   DATAIQ010000296 DATAIQ010000000
VERSION     DATAIQ010000296.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1780)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1780)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1780
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15226"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..727)
                     /locus_tag="VHN20_05070"
     CDS             complement(<1..727)
                     /locus_tag="VHN20_05070"
                     /inference="COORDINATES: protein motif:HMM:NF017390.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M56 family metallopeptidase"
                     /protein_id="HEX2725173.1"
                     /translation="MTAWLADTLVATTGLLLLVLALREPVRRQFGAGAAYALWLVPAA
                     RIAMPTMTKTVERTVAPAPAIEPQAMAVAAPPLPPPDPSLLDSVGGLAGLALWLWLGG
                     AALMLVHGLATYRRQRRQVLGAAVQLARLGSIRIVRSEAVRGPLAFGILDRVIALPVD
                     FDTRFDERQRRLALDHELAHHRSGDLVANLVAYVLLCLQWFNPLAWVSHAAFRFDQEA
                     ACDARVLDKAKGPDRAAYGQAIAK"
     gene            complement(724..1095)
                     /locus_tag="VHN20_05075"
     CDS             complement(724..1095)
                     /locus_tag="VHN20_05075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017978332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BlaI/MecI/CopY family transcriptional regulator"
                     /protein_id="HEX2725174.1"
                     /translation="MDVRLSDAEWDVMEVLWAANGALTATDIAERVPADRQWTLPTVK
                     SLLSRLLAKKAVAPKKDGRRFLYSPAIERDSYVGSESRRFVGRVFGGKLSPLFARLAE
                     EEALGDDDLAEIAALIEELRK"
     gene            complement(1200..1616)
                     /locus_tag="VHN20_05080"
     CDS             complement(1200..1616)
                     /locus_tag="VHN20_05080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725175.1"
                     /translation="MQHTKFSKRSSGLILAGLCAAVIAWPATAHPEHKTETLERKVII
                     HSDGKGEASATWDGKDVQTKCPGIVTSVEAAAATSADKKQQAKIVLCTKGGTKAEQID
                     GLKRALARIQSSTDMDSGLKAQVIAELQARIAELGG"
BASE COUNT          285 a          615 c          614 g          266 t
ORIGIN      
        1 ccttggcgat cgcctgccca taggcggcgc gatcaggccc cttcgccttg tccagcaccc
       61 gtgcgtcgca ggccgcttcc tggtcgaacc ggaaggcggc gtgcgacacc caggcaagtg
      121 ggttgaacca ctggaggcac agcaggacat aagcgacgag attggcgacg aggtcgccgg
      181 aacgatgatg ggcgagctca tggtcgagcg cgagccgccg ctggcgctca tcgaagcggg
      241 tgtcgaagtc gaccggcagg gcgatcaccc ggtcgaggat gccgaacgcg agcggcccgc
      301 gcaccgcctc ggaacggacg atgcggatcg aaccgagccg ggcaagctgg accgcggcac
      361 cgagcacctg gcggcgctgg cggcggtaag tggcgaggcc atggacgagc atcagcgcgg
      421 cgccgccgag ccacagccac agggccagcc cggcaagacc gccgacgctg tcgagcagcg
      481 acggatcggg tggcggcagc ggcggcgcgg ccacggccat ggcctgcggc tcgatcgccg
      541 gggctggcgc gaccgtgcgc tcgaccgtct tcgtcatggt cggcatggcg atccgcgccg
      601 ccggcaccag ccacagcgca taggccgcgc cggcgccgaa ctggcggcgg accggctcgc
      661 gcaacgccag cacgagcagc aacaggccgg tggtggcgac gagcgtatcg gccagccacg
      721 cggtcacttg cgcagctcct cgatcagcgc cgcgatctcg gcgaggtcgt cgtcaccgag
      781 cgcttcctct tcggccaggc gggcgaacag cggcgacaat ttgccgccga acacccggcc
      841 gacgaaccgc cgcgactcgc tgccgacgta ggaatcgcgc tcgatcgccg gcgaatagag
      901 gaagcggcgg ccatccttct tcggcgccac cgcttttttg gcgaggagcc tcgacagcag
      961 gctcttgacg gtcggcaagg tccactgccg gtcggccgga acgcgctcgg cgatgtcggt
     1021 ggcggtaagc gcgccgttcg ccgcccacag cacctccatc acgtcccatt ccgcgtcgct
     1081 cagccgaacg tccacaggcc agccctccca attgcgatta cagtcgtaat cgggacgatt
     1141 acgtttgtaa acgcaaaaat tccgagtgcg ccgaatcccg gcgcgaacgg cgcgaggggt
     1201 cagccgccga gctcggcgat cctggcctgg agctcggcaa tgacctgcgc cttcaggccc
     1261 gagtccatgt cggtgctcga ctgtatccgg gcgagagccc gcttaagacc gtcgatctgc
     1321 tcggccttgg tgccgccctt cgtgcacagg acgatcttcg cctgctgctt cttgtcggcc
     1381 gaggtggcgg cggccgcttc gaccgaggtg acgatcccgg ggcacttggt ctggacgtcc
     1441 ttgccgtccc aggtcgcgga cgcctcgccc ttgccgtcgc tgtggatgat caccttgcgc
     1501 tcgagcgtct cggtcttgtg ctcgggatgg gccgtggccg gccaggcaat gaccgctgcg
     1561 caaagcccgg ccagaatcag cccgctgctg cgcttgctga atttcgtatg ttgcatgata
     1621 gtccccttcc ttcgcgtcgc gggggcgaac atcgcagcgg atttccgaac cgccgatgaa
     1681 cggctagcag cgcagcccga acggcccgag ccggccggcg gcgccgcgcg cgaacgcctt
     1741 gctcgagcgc ggcgggagga tcgcgatctc gaccttgctg
//
LOCUS       DATAIQ010000297         1718 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_15279, whole genome shotgun sequence.
ACCESSION   DATAIQ010000297 DATAIQ010000000
VERSION     DATAIQ010000297.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1718)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1718)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1718
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15279"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..289
                     /locus_tag="VHN20_05085"
     CDS             <1..289
                     /locus_tag="VHN20_05085"
                     /inference="COORDINATES: protein motif:HMM:NF013488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HEX2725176.1"
                     /translation="ALAASRAGKFAAFHDALYAAGRQTPQSISTVANGLALTPAQAQD
                     PAIEAEIHKNMALASQLGATGTPLFVVGDAVINSAAGYDALKSAVAAARKS"
     gene            complement(410..1096)
                     /locus_tag="VHN20_05090"
     CDS             complement(410..1096)
                     /locus_tag="VHN20_05090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RlmE family RNA methyltransferase"
                     /protein_id="HEX2725177.1"
                     /translation="MSRSGAGPRARVKTAKGRKVSSTKWLERQLNDPYVKRAKAEGYR
                     SRAAYKLIELDERFALLKGVSTVVDLGIAPGGWSQVVRRKAPRAAIAGIDLLPTDPIE
                     GVTILQMDFMDEDAPERLRDALGGQPADLVLSDMAANTVGHPQTDHLRTMALVEAGLE
                     FATQVLRQGGAFVAKVLAGGADNSLVAELKRHFTSVKHAKPPASRKGSSEWYVVAQGF
                     KGHSDSDLPD"
     gene            complement(1093..>1718)
                     /locus_tag="VHN20_05095"
     CDS             complement(1093..>1718)
                     /locus_tag="VHN20_05095"
                     /inference="COORDINATES: protein motif:HMM:NF014587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725178.1"
                     /translation="LAVLGCHKLLEPGDGPALIFDIGGGSTELVLVEPGEDERPPRIR
                     AWWSAPWGVVSLTESEGAAAIDGANRLEAYARMKARAKESFSRFAEILPADRDDIRLL
                     GTSGTVTTLASVHLALPSYDRRAVDGLHVPIADMRRISTMIAELDFGGRSSVPCIGAE
                     RADLVVAGCAILEAILDIWPADRLGVADRGIREGILRSLMANDGYSV"
BASE COUNT          282 a          595 c          553 g          288 t
ORIGIN      
        1 ggcgctggcc gcttcgcgcg cgggaaagtt cgcggcgttc cacgatgcgc tgtacgccgc
       61 cggccgacag accccgcaat cgatttccac cgtggccaac ggcctcgcgc tgactcccgc
      121 gcaggcccag gacccggcga tcgaggcgga gatccacaag aacatggccc ttgccagcca
      181 actcggagcg accggaacgc cactgttcgt ggtgggcgac gccgtcatca attcggcagc
      241 cggttatgac gcgttaaagt ctgctgtggc ggccgctcga aagagttgat cgccagcgcc
      301 agcgcatcga gcaggtcccc agccatatcc gcgccgaacg cagcattgcc gttttcgtcg
      361 agttggctgt cggcgcgaag acgcaggccg aggcgtgtgg cagattgaat cagtccggca
      421 aatcgctgtc agagtggccc ttgaagccct gcgcgacgac ataccactcg ctcgatccct
      481 tgcggctggc gggcggtttc gcgtgcttga cgctggtgaa gtggcgcttg agctctgcga
      541 ccagactgtt gtcggcgccg ccggccagca ccttcgcgac gaacgctccg ccctgccgaa
      601 gaacctgcgt ggcgaactcc agtccggcct cgaccagggc catggtccgc agatggtcgg
      661 tctgggggtg gccgacggta tttgcagcca tatcgctcag cacgaggtcg gccggctgcc
      721 cgccaagcgc atcgcgcagg cgctcgggtg cgtcctcatc catgaaatcc atctgcagga
      781 tcgtgacgcc ctcgatcgga tcggtgggaa gcaggtcgat gcccgcgatc gctgccctcg
      841 gcgcctttct tcgcacgacc tggctccacc cgccgggcgc gattccgagg tcgacgacag
      901 tactgacgcc cttgagcagg gcgaagcgct cgtccagctc gatcagcttg taggccgcgc
      961 ggctccgata gccctccgcc ttggcccgtt tgacgtaggg gtcattgagc tgccgctcga
     1021 gccatttggt cgagcttacc ttgcggccct tggcggtctt aacccgcgcg cgtggcccgg
     1081 ccccagaacg gctcataccg aatagccgtc gttggccatc agcgatctca ggattccctc
     1141 gcggatgccg cggtcggcga cacccagccg gtcggccggc cagatatcga ggatcgcctc
     1201 aaggatcgca cagcccgcga cgactaggtc cgcgcgctcg gcgccgatgc atggcacgct
     1261 cgaccggccg ccgaagtcca gctcggcaat catcgtcgag attcgccgca tgtcggcgat
     1321 cggcacgtga agcccgtcga ccgcgcgccg gtcatagctc ggcaaggcga ggtggacgct
     1381 ggcgagggtc gtaaccgttc ccgaagttcc aagcaggcgg atgtcgtcac ggtcagccgg
     1441 caagatctcg gcaaagcgcg agaagctttc cttcgctctc gccttcatgc gcgcataggc
     1501 ctcgagccgg ttggcgccgt cgatcgccgc agccccttcg ctctccgtca gggaaacaac
     1561 gccccatggc gcagaccacc aggcgcggat ccggggcggc cgctcgtctt cgcccggctc
     1621 gaccagcacc agctccgtcg atcccccgcc gatgtcgaag atcagagccg gcccgtcgcc
     1681 aggttcgagc agcttgtggc agccgagaac ggcaaggc
//
LOCUS       DATAIQ010000298         1796 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_15306, whole genome shotgun sequence.
ACCESSION   DATAIQ010000298 DATAIQ010000000
VERSION     DATAIQ010000298.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1796)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1796)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1796
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15306"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1574)
                     /locus_tag="VHN20_05100"
     CDS             complement(<1..1574)
                     /locus_tag="VHN20_05100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012589452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 3 N-terminal
                     domain-containing protein"
                     /protein_id="HEX2725179.1"
                     /translation="MLVVNPTGALAHATPISRRVQSLLAAMTLPEKLGQLTMVTAEGA
                     VTGPVVPSDYIAQIRTGEVGSLLNLIGRQRTGEIQRIAVEETRLGIPLLFAFDVLHGY
                     RTIFPIPLGEAAAFDPKLWERTARLAAAEAAEDGVDLTFAPMLDVSRDPRWGRLAEAP
                     GEDPWLASRFAEAKTRGFQQGDLAAPRSIAATAKHIGAYGAVTAGREYASVDVSERSL
                     HEVYLPPFRAAVEADVAAIMPAFTDLAGVPMSANPVILRDIVRERWGFAGVIISDYAA
                     IAELVAHGVAADLAEAAALALKAGVDLDMMGFAFLRGLPLALERGLVAEQDIHTAVSR
                     VLQLKERVGLFDDPYGVNPRPRLPGRPARRKLARDAARRAIVLLTNRDQTLPLPSSLR
                     RLALIGPLADAPQEMLGPWFADGRAEETVTFLQGLCAALPAAEIKHARGVDVEGDDVS
                     GLAAAIELCREADAVVLCLGESRTMSGEAASRAKPDLPGRQRELAEAVMGTGKPVIAV
                     LSSGRPLMAPWLVERA"
BASE COUNT          293 a          601 c          613 g          289 t
ORIGIN      
        1 tgggcgcgtt cgacaagcca aggcgccatg agcgggcgtc ccgaagagag gacggcgatc
       61 acaggcttgc cggtgcccat gacggcttcg gcgagctcgc gttgccggcc tggcaagtcc
      121 ggtttcgccc gactggcggc ctctccgctc atggtccggc tttctccgag acacagcaca
      181 acggcatcgg cttcgcgaca gagctcaatt gcggccgcca ggccgctcac gtcatcgcct
      241 tccacatcga cgccgcgcgc atgcttgatt tcggcagccg gcagggcggc gcacaaccct
      301 tgcaggaatg tgacggtctc ctcggctctc ccgtccgcga accatggccc gagcatctcc
      361 tgaggcgcgt cggcaagtgg ccctatgagg gcgaggcggc gcaagctcga cggtagcggc
      421 aaggtttggt cgcggttggt caggagcacg attgcacggc gcgccgcgtc gcgcgccagc
      481 ttgcgccgag ccgggcggcc cggcagcctc ggtctggggt tgacgccgta aggatcatcg
      541 aagagtccca cccgctcctt gagctgcaac acccgcgaga ctgccgtatg gatatcctgc
      601 tcggcgacga gtccgcgctc gagcgcgagc ggcaagccgc gcagaaaggc gaatcccatc
      661 atgtccaggt cgacgccggc cttgagcgcc agtgcggccg cctcggccag atccgcggcg
      721 accccgtgag cgacgagttc ggcgatcgcg gcataatcgc tgatgatcac gcccgcaaag
      781 ccccagcgct cccgcacgat gtcgcgcagg atgacggggt tggcggacat cggcacgccc
      841 gccagatcgg tgaaggcagg catgattgct gcgacgtccg cctcgaccgc cgctctgaac
      901 ggcggaaggt aaacctcgtg cagcgaacgc tctgatacat cgacggaggc atattcccga
      961 cccgccgtca cagcaccgta agcaccgata tgcttcgctg tggcggcgat gctgcgcggg
     1021 gcagcgaggt cgccctgctg aaatcctcgc gtcttggcct cggcgaaacg tgaggcgagc
     1081 cacggatcct cacccggcgc ttccgccagc cggccccagc gcggatcccg cgaaacgtcc
     1141 agcatcggcg caaaggtcag gtcgacgccg tcctcggccg cttcggctgc cgcaagccgg
     1201 gcggtgcgtt cccagagctt cggatcgaac gcggccgcct cgcccagcgg gatcggaaag
     1261 atggtgcggt aaccgtgcag cacgtcgaac gcgaaaagca ggggaatacc gaggcgcgtc
     1321 tcctcgacgg caattcgctg gatctcgccc gtccgctgcc ggccgatgag attcagcagg
     1381 ctgccgacct ctccggtcct gatttgcgcg atgtagtcgc tcggtacgac cgggccggtc
     1441 accgcgcctt cggccgttac catcgtgagt tgaccaagct tttccggcag ggtcatggcc
     1501 gcgagcagcg actgcacgcg gcggctgatc ggcgtggcgt gggccagggc gcccgtggga
     1561 ttgacgacta gcacgcggtg tctccggcgt caggccatag cttctcgcgc cgtcgccgag
     1621 cgacattgat cgggatcaaa tcttggcggt tcggccggtg ctaccggtgt ggcgacgagc
     1681 cgaaggcgga tctgatgagt tcgggggtcg cgctgcgaga agctttggcc tgggcggcgg
     1741 cgcctggcag ccggctgctt cccgaattgg gcggtatcgc cggaccgctg aaagct
//
LOCUS       DATAIQ010000299         2439 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_237854, whole genome shotgun sequence.
ACCESSION   DATAIQ010000299 DATAIQ010000000
VERSION     DATAIQ010000299.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2439)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2439)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2439
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_237854"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            182..517
                     /locus_tag="VHN20_05105"
     CDS             182..517
                     /locus_tag="VHN20_05105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HEX2725180.1"
                     /translation="MAGPGLDLESFEKKATEVAGILRALANERRLMILCKLVEWGEAN
                     VGTLADAVGLSQSALSQHLARMREEGLVTSRRESQTIWYRVADPRIEQLFASLYDLFC
                     KQVKGRKRS"
     gene            555..980
                     /locus_tag="VHN20_05110"
     CDS             555..980
                     /locus_tag="VHN20_05110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012330134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeeE/YedE family protein"
                     /protein_id="HEX2725181.1"
                     /translation="MENFTPASALIGGALIGASAALFVMLNGRVAGISGVLGGLIPPV
                     RGEVAWRVAFLAGLFMAPLAYVFFGGSLPTVTLTQPLALLVVAGLIVGFGTRLGAGCT
                     SGHGVCGIGRASPRSIAATLVFMTTAIATILVVRHVVGG"
     gene            984..1445
                     /locus_tag="VHN20_05115"
     CDS             984..1445
                     /locus_tag="VHN20_05115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017482845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeeE/YedE family protein"
                     /protein_id="HEX2725182.1"
                     /translation="MSLIVSAFASGLLFGLGLIVSEMVNPAKVLAFLDVFGDWDPSLA
                     FVMAGAVAVSAFGYFVTQRRGRPILAPRLEIPTRRDLDPRLIAGAALFGIGWGLVGLC
                     PGPALTALTFGPWQLFVFVAAMLAGMALFRLVPEDWPQVTFRRRSTAGADG"
     gene            1445..2248
                     /locus_tag="VHN20_05120"
                     /pseudo
     CDS             1445..2248
                     /locus_tag="VHN20_05120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011505263.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
     gene            2274..>2439
                     /locus_tag="VHN20_05125"
     CDS             2274..>2439
                     /locus_tag="VHN20_05125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003597874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX2725183.1"
                     /translation="MSTSTSLLKGKPIVKGFFEKRTSSVQYVVADPETKRAVIIDPVL
                     DFDPKSGDTDT"
BASE COUNT          339 a          815 c          826 g          459 t
ORIGIN      
        1 gcgctgaacg acgaagccgc taccgcaggc gcaacgagcc acgctaagca tcgcctcttg
       61 ccgctctaaa cggcggtttt ccggactggt tcccggcctg gcggcctgag gaccgacggc
      121 acttgcaatt gcattagtat atgctaaatt agctagaact aaatatcagg gaggcgggcg
      181 gatggctggc cccggtttgg acctggagag tttcgagaag aaggcgaccg aggtcgcagg
      241 catcctgcgc gccctggcga acgagcgccg gctcatgatc ctgtgcaagc tggtggagtg
      301 gggagaggcc aatgtcggca ccctggccga cgcggtcggc ctgtcgcaat cggcgctgtc
      361 gcaacacctc gcgaggatgc gcgaggaggg gctcgtcacc tctcggcggg aaagccagac
      421 catctggtac cgggtcgccg atccgcgcat cgagcagctg ttcgcctcgc tctacgacct
      481 gttctgcaag caggtgaagg gccgcaagcg gtcctgacgg atacacgcgg agcgacggct
      541 cccgggagac catgatggaa aacttcaccc ccgcatccgc cctcattggc ggcgccctga
      601 tcggcgcatc ggccgccttg ttcgtcatgc tcaacggccg tgtcgccggc atcagcggtg
      661 tcctgggagg cctgatccct cccgtgcgcg gcgaagtcgc ctggcgcgtt gcgttcctgg
      721 ccggcctctt tatggcgccg ctcgcctacg ttttcttcgg agggtctctg ccgacggtga
      781 ccctgacgca accgctcgcg ctgctcgtcg tcgccggcct gatcgtcggc ttcggcacgc
      841 gtctcggggc gggctgcacc agcgggcatg gagtctgcgg catcgggcgc gcttcgccgc
      901 gttccatcgc ggccacgctc gtattcatga cgacggccat cgcgacgatc ctggtcgtcc
      961 gccacgtcgt gggaggctga gccatgtcgt tgatcgtatc cgccttcgcc tcaggcctgc
     1021 tgttcgggct cgggctgatc gtctccgaga tggtgaatcc ggcgaaggtc ctcgccttcc
     1081 tggacgtttt cggcgactgg gatccgagcc ttgccttcgt catggccggc gcggttgccg
     1141 tgtcggcctt cggctatttc gtcacgcagc gacgcggcag gcccatcctt gcaccacgac
     1201 tcgagattcc gacccggcgt gacctggacc cgcgtctgat cgccggcgcc gccctgttcg
     1261 gaatcggctg gggcctcgtc ggcctctgcc cgggcccggc cctgacggct ttgacgttcg
     1321 gaccctggca gctcttcgtc ttcgttgccg cgatgctcgc tgggatggcg ctgttccgcc
     1381 tggtgccgga ggactggccg caggtgacct tcaggcggcg aagcaccgcc ggagcggacg
     1441 gctgatgccc gacatcacga cctcactgct cgcgaccggc tccggcggca tggtcgggct
     1501 ggttctcggc ctcgtcggcg gcggcggctc gatcctggcc gtgcccctcc tggtctacgt
     1561 cgtgggcgtg gcgtcgccgc acgtcgccat cggcaccagc gcggtcgccg tatcggcgag
     1621 cgcgctcggc aacgttgtcg cgcactggcg cctcggcaac gtcaaatgac gatgcgcagc
     1681 cgtgttcgcg accgccggca tgctcggcgc cttcgcgggc tcgactgttg ccaagtcgat
     1741 cgacggccag aagctgctcg cgcttttcgg catcgtgatg gtcgccgtcg gggccgtgat
     1801 gctgcgcagg cgggatgcag gaggtaacgc gcaggtgcgc ctgacgagag acacggcagg
     1861 agagctgctt ccgatgctga tcggcatcgg cttcggcgtc ggggcgttct ccggcttctt
     1921 cgggatcggc ggcggctttc tgatcgtgcc gggcctgatc ctcgcgaccg gcatgccgct
     1981 caccttcgcc atcggcacgt ccctcgtcgc cgtgtccgcc ttcggggcgg cgacggccgc
     2041 cagctacgcg gtctcggggc tggtcgactg gtggctcgcc gggctgttcg tcctcggcgg
     2101 cggcgccggc ggcatcgccg ggaccgctct cggcaaggtg ctcgcgaaac ggcggcaggt
     2161 gctgggagcc gtcttcgccg gcctcgtcat gatcgtcggc ctttacatcg tatcgcgcgg
     2221 cgttctcgcg ctgaccgcca aagcgtgaga cggacacgca aaggagaatg cttatgtcca
     2281 cctcgacctc gctcttgaaa ggaaagccca tcgtgaaggg ctttttcgaa aagcgcacgt
     2341 ccagcgtgca atacgtggtc gccgacccgg agacgaagcg ggcggtgatc atcgacccgg
     2401 tgctcgattt cgatccaaag tcgggcgaca ccgacacac
//
LOCUS       DATAIQ010000300         3015 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_430550, whole genome shotgun sequence.
ACCESSION   DATAIQ010000300 DATAIQ010000000
VERSION     DATAIQ010000300.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3015)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3015)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3015
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_430550"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..681)
                     /locus_tag="VHN20_05130"
     CDS             complement(<1..681)
                     /locus_tag="VHN20_05130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018262002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX2725184.1"
                     /translation="MRLYGKIALVTGGARGIGFAIAKALTAEGAVPVIADINEQGAHA
                     AVSALDSGQGLALGVDVSDQASITAMVEAIIDRHGRLDILVNNAGIGGNTPFLDIKLE
                     EWNRTIAINLTGAFLVAQACAREMVKQGGGKIVNIASLSGQRGGHGRAAYGAAKAGLE
                     LLTKVMAVELAEFGINVNNIAPGAIETDMAKFAHDQATRAAYNYLIPMTRYGTPEEIA
                     DAAVFLCSD"
     gene            complement(707..2077)
                     /locus_tag="VHN20_05135"
     CDS             complement(707..2077)
                     /locus_tag="VHN20_05135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four-carbon acid sugar kinase family protein"
                     /protein_id="HEX2725185.1"
                     /translation="MSRPRPLPNGPLVAFYGDDFTGSSAAMEALAFAGLDTVLFLAPP
                     GPERLAAFAGFRGIGIAGVARSRDPEWMDRHLPPVFQLLKSLATPVVHYKVCSTFDSA
                     PQIGSIGRAIDIAAASFDGWVPLVVGEPSMGRFQCFGHLFALAQGKGYRLDRHPTMSQ
                     HPVTPMDEADLGRHLARQTDKPVGLVDFMAMKRGQAEAQLARTLADGSRIVSLDVLDD
                     ETLIEAGRLVWEKAGRQVFAVGSQGLEVALVAYWRAAGLLQAEAASRNPGRVERIACV
                     SGSVSPVTASQIAYSTSHGFVGIRIKAEQAVDGRAWDAEIERTTAEALRALSEGRDPL
                     VYSAAGPADPAVTALRQAVAAAGSSAETVNDRIGSGLGRVLDALVREARLTRVVISGG
                     DTSGHAAAMLGIDALTAIAPVAPGSPLCRAHAVDPARDGLQLALKGGQVGGDNFFCAV
                     RDGVSA"
     gene            complement(2074..>3015)
                     /locus_tag="VHN20_05140"
     CDS             complement(2074..>3015)
                     /locus_tag="VHN20_05140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009207988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0016984 - ribulose-bisphosphate
                     carboxylase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RuBisCO large subunit C-terminal-like
                     domain-containing protein"
                     /protein_id="HEX2725186.1"
                     /translation="NLFELRPVSGLKLLDIRMPPAFAAAYPGPRFGIAGTRDLADVHG
                     RPLIGTIIKPSVGLEAEATAALVKELCEAGIDFIKDDELQSDGPSCPFDERVRAVMRV
                     IEAQADRTGKKTMFAFNLTGDLDQMRRRHDTLIANGATCLMASLNSVGLVGMIELRRF
                     SQLPIHAHRNGWGYLSRHPLLGWSYVAWQKLWRLAGADHMHVNGLQNKFSETDESVIE
                     SARACLTPMFTEKACTVMPVFSSGQSARQVHATYAALQSTDLIMTAGGGIMAHPDGPA
                     AGVRSLREAWNAAMAGISLAEHARTHPELGRALEIAA"
BASE COUNT          451 a         1021 c         1081 g          462 t
ORIGIN      
        1 gtcggagcac aggaacacgg cggcgtcggc gatctcctcc ggcgtgccgt agcgcgtcat
       61 cgggatcagg tagttgtagg cggcgcgggt ggcctggtcg tgcgcgaact tggccatgtc
      121 ggtctcgatg gcgcccggcg ctatgttgtt gacgttgatg ccgaactcgg cgagctcgac
      181 ggccatcacc ttggtcagca gctcgaggcc ggccttggcg gcgccgtagg cggcgcggcc
      241 atggccaccg cgctgtccgg acagcgaggc gatgttgacg atcttgccgc cgccctgctt
      301 caccatctcg cgggcgcagg cctgcgcgac gaggaacgct ccggtgaggt tgatcgcgat
      361 cgtgcggttc cactcctcga gcttgatgtc gagaaagggc gtgttgccgc cgatgccggc
      421 gttgttgacg aggatgtcga ggcggccgtg gcggtcgatg atcgcttcaa ccatggcggt
      481 gatcgatgcc tgatcggaca cgtcgacgcc aagcgccagg ccctgccctg agtcgagcgc
      541 gctcaccgcg gcgtgcgcgc cctgctcgtt gatgtcggcg atgaccggga ccgcgccttc
      601 ggcggtcaga gctttcgcga tggcgaagcc gatcccgcgc gcgccgccgg tcaccagcgc
      661 gatcttgccg tacagtctca tcggtcctcc tggtcagcaa tccgcgtcac gccgacaccc
      721 cgtcgcgcac cgcgcagaag aaattgtcgc cgcccacctg gccgcctttg agcgccagct
      781 gcagcccgtc gcgcgccgga tcgaccgcat gcgcgcggca gagcggggag cccggcgcca
      841 cgggcgcgat cgcggtcaac gcatcgatgc ccagcatcgc agccgcgtgg cccgaggtat
      901 cgccgcccga gatcacgacg cgggtgagcc tcgcctcgcg cacgagcgca tcgagcacgc
      961 gtccgagccc ggagccgatg cggtcgttga ccgtctcggc cgaggagccg gcagcggcga
     1021 ccgcctggcg cagcgccgtg accgccgggt cggcggggcc ggccgcgctg tagaccagtg
     1081 gatcgcgccc ttcggacagg gcgcgcaacg cttccgcggt cgtccgttcg atctccgcgt
     1141 cccacgcacg gccgtcgacg gcctgctcgg ccttgatgcg gatgcccacg aagccgtggc
     1201 tggtcgaata ggcgatctgg ctcgccgtca cgggcgacac cgatcccgag acgcaggcaa
     1261 tgcgctcgac ccgccccgga ttgcggcttg cggcctcggc ctggagcagg cccgccgccc
     1321 gccagtaggc gacgagcgcg acctcgagac cttgcgagcc gacggcgaag acctgcctgc
     1381 cggctttctc ccagacgagc cgtcccgcct cgatcagggt ctcgtcgtcg agcacgtcga
     1441 gcgacacgat gcggctgccg tcggcgagcg tccgtgccag ctgcgcctcg gcttggccac
     1501 gtttcatcgc catgaagtcg acgaggccga ccggcttgtc cgtctgccgc gccagatggc
     1561 ggccgagatc ggcctcgtcc atcggcgtga cgggatgctg cgacatggtc gggtggcggt
     1621 cgagccgata gcctttgccc tgggcgagcg cgaagaggtg gccgaagcac tggaagcgtc
     1681 ccatcgacgg ctcgccgacc acgaggggta cccagccgtc gaacgacgcc gcggcgatgt
     1741 cgatggcgcg gccgatgctg ccgatctgcg gcgccgagtc gaaggtcgag cagaccttgt
     1801 agtgcaccac gggcgtggcc agcgatttca gcagctgaaa cacgggcggc agatgccggt
     1861 ccatccattc gggatcgcgc gagcgcgcca cgccggcgat gccgatgccg cggaagccgg
     1921 cgaaggcggc gagccgctcg gggccgggag gcgcaaggaa cagcacggtg tcgagacccg
     1981 cgaaggcgag cgcctccatc gcggccgacg agccggtgaa gtcgtcgccg tagaaggcga
     2041 cgagaggccc gttcggcagc gggcggggac ggctcatgcg gcgatctcca gggcccggcc
     2101 gagctcggga tgcgtgcgcg catgctcggc gagtgatatc cccgccatcg ccgcgttcca
     2161 cgcttcgcgc agggagcgca cccccgccgc ggggccgtcg ggatgggcca tgatgcctcc
     2221 gccggccgtc atgatcagat ccgtcgattg caaggcggcg taagtggcgt ggacctgacg
     2281 cgccgattgt cccgacgaga ataccggcat aaccgtgcac gccttttcgg tgaacatcgg
     2341 cgtcaggcag gcacgggcgg actcgatcac gctctcgtcg gtctccgaga acttgttctg
     2401 caggccgttg acatgcatgt ggtcggcgcc cgccagccgc cacagcttct gccaggcgac
     2461 ataggaccag ccgagcagcg gatggcgcga gagatagccc cagccgttgc gatgcgcgtg
     2521 gatcggaagc tggctgaagc ggcgcagctc gatcatgccg acgagcccga ccgagttcag
     2581 gctcgccatc aggcatgtgg cgccgttggc tatgagcgtg tcgtgacgcc ggcgcatctg
     2641 gtcgaggtcg ccggtcaggt tgaaggcgaa catggtcttc ttgccggtcc ggtcggcctg
     2701 ggcctcgatc acgcgcatga cggcacggac gcgctcgtcg aaggggcagc tcgggccgtc
     2761 cgattgcagc tcgtcgtcct tgatgaaatc gatgccggcc tcgcacagct ccttgacgag
     2821 cgccgccgtc gcctcggcct cgagtccgac gctcggcttg atgatcgtgc cgatcagggg
     2881 gcgcccgtgc acgtcggcga ggtcgcgcgt cccggcgatg ccgaagcgtg ggccgggata
     2941 ggccgcggcg aaggccgggg gcatgcggat atcgagcagc ttcagcccgc tcacgggcct
     3001 cagctcgaag agatt
//
LOCUS       DATAIQ010000301         4857 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_107580, whole genome shotgun sequence.
ACCESSION   DATAIQ010000301 DATAIQ010000000
VERSION     DATAIQ010000301.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4857)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4857)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4857
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_107580"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..205)
                     /locus_tag="VHN20_05145"
                     /pseudo
     CDS             complement(1..205)
                     /locus_tag="VHN20_05145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000473766.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein"
     gene            complement(422..955)
                     /locus_tag="VHN20_05150"
                     /pseudo
     CDS             complement(422..955)
                     /locus_tag="VHN20_05150"
                     /inference="COORDINATES: protein motif:HMM:NF012993.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
     gene            1168..1566
                     /locus_tag="VHN20_05155"
     CDS             1168..1566
                     /locus_tag="VHN20_05155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013165038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX2725187.1"
                     /translation="MTTQAEAARTPGATRAGPGEHLFELAKASPIKGGPDYSSAVGGC
                     VEGDRMMVALMRMPAGTGAEAHSHPNEQWIFVIEGTFRMNVGGQEVEAKPGSVIYIPS
                     NVVHSAKAVTEVVFFTAKDTSHSLHGIKAA"
     gene            1594..2580
                     /locus_tag="VHN20_05160"
     CDS             1594..2580
                     /locus_tag="VHN20_05160"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEX2725188.1"
                     /translation="MKRLAIVLSALCLALVAGAAGAQDKYPSKPVKILVPYAPGGATD
                     IVSRVLGEQLRNQLGQSFVTENKPGAFGILAIEEMARAKPDGYTLMIGNVSTNAITPV
                     VFPKKFAINYDRDVIPVARLVDIPEFLLVTTKDFAPKTVAEFVAHAKANKGKVRYGSV
                     GVGSYPHYDMAFFANKAGLDMIHIPNKAGASGVVKDMAIGDVQAAFLNVASTAALIKA
                     GQLRPVALVNEKRLADYPDVPTMAEVGYPGVGTMAWQALFAPAGTPKEVVDTLNKAIL
                     EAMNAPAVKEAFNKQGFNIVPSKSSDEAKTWLKGEIDSWRKITDEVKIDLTE"
     gene            2631..4313
                     /locus_tag="VHN20_05165"
     CDS             2631..4313
                     /locus_tag="VHN20_05165"
                     /inference="COORDINATES: protein motif:HMM:TIGR00976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HEX2725189.1"
                     /translation="MKMEPTPEVPADGIVVDKDVEIPMRDGARLRADILRPDDGGRFP
                     AIMNLGPYQKDKVWIPPENLEEKPNPLMNWETINPEWWVPKGYAAVRVDARGTGKSPG
                     QGDPWSYQESLDFHDAIEWAARQPWCSGAVGLSGISYFAINQWFVANHQPPSLKAMIP
                     WEGFADLYRDALFHGGILNQFMTNWFVTHLSHHLIGRAYRDNPDTWQTNTLWKWLRNN
                     LDNGTFRGEQAQWDRITVPFLTAGNWSGMGLHLRGNTEAFMRAASPHKKLRIHAGTHV
                     HPFYTADGRREQLRFFDYWLKGIDNGVMDEPPVKLAIRQGGGEVEWRFENEWPLARTQ
                     WTKFYLDLSPPAADQAPNSGTLTGENPAETGSRTYFASGLSKGGSSSASSTFLASGAM
                     QAGMGISLETPPLQADTEVTGPVAAVLWVSSSTEDVDLFLTIRNIDPDGNDVWETGQQ
                     GQQVPVAKGWLRVSHRELDPDLSLPYRPYHKHQRRLYLTPGEPVEVQVEIWPTSMVFR
                     KGHRIRLDIQPRDGVGSVHYTHYHADYNSGSNTIYAGGDKPSYLLLPIIPAA"
     gene            4330..4827
                     /locus_tag="VHN20_05170"
     CDS             4330..4827
                     /locus_tag="VHN20_05170"
                     /inference="COORDINATES: protein motif:HMM:NF018979.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter TctB
                     family protein"
                     /protein_id="HEX2725190.1"
                     /translation="MATRNLPGPDGRSFLGLLARKDVLAGLMFMAIAILGLWISRNYP
                     IGTALRMSTGYVPRLLCWVLLLLGGVITVSGIRSAEGEREPAQDLRWRPLILIPAALV
                     AFGLSIERLGIIAAGALLIGINSLASRDLRPVEIVPAAIVLIFATWAIFVWGLGLTIP
                     VWPEW"
BASE COUNT          853 a         1655 c         1580 g          769 t
ORIGIN      
        1 cgtgcttgtc aatgatcgtc ttgaggaagt accgcagcat cttctcggtc acgtcgaaat
       61 cggcgatcac cccgtccttg agcgggcgga ccgccaggat cccgtcgggc gtgcggccca
      121 gcatccgctt ggcctcgagc ccgatgccct tgatcttccc tgacgccttt tcgatggcca
      181 ccaccgaagg ctcgttgagc acgatcgagc cgacctcgtc gcgcgtcgcc ctgagccagc
      241 gcagccgctc gaggccgacg tcgacgatcg tgaggccggc agcggtgctc tcgaacagga
      301 tctcctccgg accggccacc atggcgaggc cgcgctcgcc gtggtcgaac aggttctggg
      361 tcgtcacgac gagcgcgaga ttctcgatcg cccgcgccca gatcagcgtg cgccacgttg
      421 cccacaactg cttcttgtcc ttgccggccg gcatgaagat gatctcggcg ccgcgcaggg
      481 cgagcgcccg cgccacctcc ggcacataga cctcgctgca catggcgagc ccgaccttgc
      541 catgcggggt gtcgaagacc gggaaatcgt cgccgggaac gtatttgaat tcccacgccg
      601 ggccccctgt gtagatccat ggcccgttcg gatgggtgcg ccggtatttg acgacgcggc
      661 cgtccggata ggccatgcag atcaggttgt gggcggtcgc cgccttctcg tcgatcggct
      721 caatcgtgcc gaacaccacg taggtgccat gtcttgcggc ggcctcagcc atcgctgcgg
      781 tcgggtcgaa ggtcgccggc atccgccacg ggcccggata ggtctcggga aagcagacga
      841 aggtcgcgcc gtcgcgggcc gcgcgctcga cgtaagccac ggcctcggcg acgttgccct
      901 cgtcctctcc cgggcggtgc gagatcggct ggacgactgc gatgcgtaac gtcatggcgt
      961 ttcggctccc tcgtgatgcg tgtccggcag gccgcgagac gccccgcgga tgcgattgcg
     1021 gcgaatgcta cgcgcgcgcc gccaagattg ccacattagg ctttgtgatc gcgccgatca
     1081 gatgatcgca tttgcacggg cgccgcgacg cagcctagcc tgtcgcaaca cccgaatggg
     1141 cgaagcaaag aggcaaggga ggcaaacatg acgacccagg ccgaggccgc gcgaaccccc
     1201 ggcgccacgc gcgccggccc cggcgagcat ctgtttgagc tcgccaaggc cagcccgatc
     1261 aagggtgggc ccgattactc gagcgcggtc ggcggatgcg tcgagggcga ccgcatgatg
     1321 gtggcgctga tgcgcatgcc ggccggcacc ggcgccgagg cgcattcgca cccgaacgag
     1381 caatggatct tcgtgatcga gggaacgttc cggatgaatg tcggcggcca agaggtcgag
     1441 gcgaagccgg gctcggtcat ctacatcccg tccaacgtgg tccattcggc caaggccgtg
     1501 acggaggtgg tattctttac ggccaaggac acctcgcata gcctgcacgg catcaaggct
     1561 gcctgagaca gccacacgaa ccggaggaac cccatgaagc gtcttgctat cgtgttgtcg
     1621 gccttgtgcc tcgccctcgt cgcgggtgcg gccggcgcac aggacaaata cccgagcaag
     1681 cccgtcaaga tcctcgtgcc gtatgcccct ggcggcgcca cggacatcgt ctcgcgggtg
     1741 ctcggcgagc agctgcgcaa ccagctcggg cagtcgttcg tcaccgagaa caagccgggc
     1801 gcgttcggca tcctggccat cgaggagatg gcccgcgcca agcccgacgg ctacacgctg
     1861 atgatcggca acgtctccac gaacgcgatc accccggtgg tgttcccgaa gaagttcgcg
     1921 atcaactacg acagggacgt gatcccggta gcgcgcctcg tcgacatccc ggaattcctt
     1981 ctcgtcacga cgaaggactt tgcgcccaag accgtcgccg agttcgtcgc ccacgccaag
     2041 gccaacaagg gcaaggtccg ttacggcagc gtcggcgtcg gcagctatcc gcattacgac
     2101 atggccttct tcgcgaacaa ggccgggctc gacatgatcc atatcccgaa caaggccggc
     2161 gcctcggggg tcgtgaagga catggcgatc ggcgacgtgc aggccgcctt cctcaacgtc
     2221 gccagcacgg cggcactgat caaagccggg cagttgcggc ccgtcgccct cgtcaacgag
     2281 aagcgcctcg ccgactaccc ggacgtgccg accatggccg aggtcggcta tcccggcgtc
     2341 ggcacgatgg cctggcaagc gctgttcgcg ccggccggca cgccgaagga ggtcgtcgac
     2401 acgctcaaca aggcgatcct cgaggcgatg aacgcgccgg ccgtcaagga agcgttcaac
     2461 aagcagggct tcaacatcgt gccgagcaag tcctcggatg aggccaagac ctggctcaag
     2521 ggcgagatcg acagctggcg gaagatcacg gacgaggtga agatcgacct caccgaatga
     2581 catcggcgtg cggcgcctga aacaaaccga ccacaacgag agccgaccgc atgaagatgg
     2641 aacccacgcc ggaggtgccg gccgacggca tcgtcgtcga caaggatgtc gagatcccga
     2701 tgcgcgacgg cgcccgcctc agggccgaca tcctgcggcc tgacgatggc gggcgctttc
     2761 ccgccatcat gaatctcggg ccttaccaga aggacaaggt ctggatcccg cccgagaacc
     2821 tggaggagaa gccgaacccg ctgatgaact gggaaaccat caacccggaa tggtgggtgc
     2881 ccaagggcta tgcggcggtg cgggtggatg cgcgcgggac cggcaagtcg cccggccagg
     2941 gggatccgtg gtcgtaccag gaatccctcg acttccacga cgcgatcgaa tgggcggcgc
     3001 ggcagccctg gtgctcgggc gcggtcggcc tctcgggcat ctcgtatttc gcaatcaacc
     3061 aatggttcgt cgccaaccac cagccgccct cccttaaggc gatgatcccg tgggagggtt
     3121 tcgccgacct ttaccgcgac gcgctgttcc atgggggtat cctcaaccag ttcatgacaa
     3181 actggttcgt cacgcacctg tcgcatcacc tgatcgggcg cgcctaccgg gacaatcccg
     3241 acacgtggca gaccaacacg ctgtggaagt ggctgcgcaa caacctcgac aacggcacct
     3301 tccgtggcga gcaggcgcag tgggaccgga ttaccgtgcc cttcctcacg gcgggcaact
     3361 ggtcgggcat gggcctgcac ctgcgcggca acacggaagc gttcatgcgc gccgcctcgc
     3421 cgcacaagaa gctgcgcatc cacgccggca cgcacgtcca tccgttctac accgccgacg
     3481 ggcgccgcga gcagttgcgc ttcttcgatt actggctcaa gggcatcgac aatggcgtga
     3541 tggacgagcc gccggtgaag ctcgccatcc ggcagggcgg cggcgaggtc gagtggcgct
     3601 tcgagaacga gtggccgctc gcccgcacgc aatggacgaa gttctacctc gacctgtcgc
     3661 cgccggccgc ggatcaggcg ccgaacagcg gcacgctaac cggcgaaaac ccggccgaga
     3721 ccggctcgcg cacctatttc gcgagcggcc tcagcaaggg cggctcgtcg tcggcgtcgt
     3781 cgaccttcct cgcctcgggc gcgatgcagg ccggcatggg gatctcgctc gagacgccgc
     3841 cgctgcaagc ggacacggag gtcacgggcc ccgtcgcggc ggtgctctgg gtgtcgagct
     3901 cgaccgagga cgtggacctg ttcctgacga ttcggaacat cgaccccgac ggcaacgacg
     3961 tgtgggagac cgggcagcag ggtcagcagg tgccggtcgc caaaggctgg ctgcgcgtct
     4021 cgcatcgcga gctcgatccg gacctgtccc tgccctaccg gccctaccac aagcatcagc
     4081 ggcgccttta cctgacgccc ggcgagcccg tcgaggtgca ggtcgagatc tggcccacgt
     4141 caatggtgtt caggaaaggc catcgcatcc ggctcgacat ccagccccgc gacggcgtcg
     4201 gcagcgtgca ctacacgcac taccacgccg actacaacag cggctcgaac accatctatg
     4261 cgggcggcga caagccgtcc tacctgctcc tgccgatcat cccggcggcg tgagcgagga
     4321 ccgcgcgcga tggcgacacg caacctgccc gggccggacg gacgctcctt cctcggcctg
     4381 ctggcgcgca aggacgtact tgccgggctc atgttcatgg ccattgcgat cctcggcctc
     4441 tggatctcac gcaactatcc gatcggcacg gcgctgcgta tgagcaccgg ctatgtgccg
     4501 cgcctgctct gctgggtgct gctgctgctc ggcggcgtca taacggtctc cgggatccgc
     4561 agcgccgaag gggagcggga acctgcacag gatctgcgct ggcgaccgct gatcctgatc
     4621 ccggcggcgc tggtcgcctt cgggctgtcg atcgagcggc tcggcatcat cgcggccggg
     4681 gcgctgctga tcggcatcaa cagcctcgcc agccgcgacc tgcgccccgt cgagatcgtg
     4741 cccgccgcga tcgtcctgat cttcgccacc tgggcgatct tcgtgtgggg cctcggcctc
     4801 accatccccg tctggccgga gtggtgaggt ggatctcctc tcgtccctcg caacggg
//
LOCUS       DATAIQ010000302         1579 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_384597, whole genome shotgun sequence.
ACCESSION   DATAIQ010000302 DATAIQ010000000
VERSION     DATAIQ010000302.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1579)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1579)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1579
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_384597"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..276)
                     /locus_tag="VHN20_05175"
     CDS             complement(<1..276)
                     /locus_tag="VHN20_05175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012319516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX2725191.1"
                     /translation="MTDLAILAKAPIPGFAKTRLIPLLGPDGAARLQERLIERTLATA
                     LAGAVGPVTLWCAPDDSHPAFQSAARQCGVRLARQPDGDLGVRMLAAF"
     gene            complement(269..958)
                     /locus_tag="VHN20_05180"
     CDS             complement(269..958)
                     /locus_tag="VHN20_05180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007067760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR04283 family arsenosugar biosynthesis
                     glycosyltransferase"
                     /protein_id="HEX2725192.1"
                     /translation="MKLSVIVPVLNEGATIRAHLAALAPLRARGAEVIVADGGSDDAT
                     IREAGEGADHVIAAPRGRASQMNAGARVAAGDVFLFLHADTRLPAEADLAVARAVAGG
                     HAWGRFDVRIDGRHVLLPVVAALMNARSRLTGIATGDQAIFVTRRAFEAVGGYADIPL
                     MEDIVLSRALRRLSPPACLEDCVTTSGRRWERHGPVRTILAMWRLRLAFFFGADPRAL
                     ALAYGYRPRDD"
     gene            complement(955..>1579)
                     /locus_tag="VHN20_05185"
     CDS             complement(955..>1579)
                     /locus_tag="VHN20_05185"
                     /inference="COORDINATES: protein motif:HMM:NF023763.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF3641 domain-containing protein"
                     /protein_id="HEX2725193.1"
                     /translation="DLAAFLAGNQIDVVASLPCYLEDNVDRQRGKGVFDKSVEGLRRL
                     NAVGYGDPRSGLVLNLVFNPQGPSLPPGQTALEADYKRILGERYGIVFNELFVLANMP
                     IQRFGSMLVSKGQFHDYMALLKGAHRDANLAGVMCRSLLSVDYQGYLYDCDFNQMLKL
                     PVGGRPHLRDLLSRDFEGGRIRVAGHCYGCTAGQGSSCGGALREAAE"
BASE COUNT          240 a          551 c          578 g          210 t
ORIGIN      
        1 gaacgccgcc agcatgcgga cgccgaggtc gccgtcgggc tgccgcgcca gcctcacccc
       61 gcattggcgt gcggccgact gaaaagccgg gtggctgtcg tcgggcgcgc accacagggt
      121 gaccgggccg acggcgcccg ccagcgccgt ggcgagcgtc cgttcgatca ggcgctcctg
      181 gagccgcgcg gcgccgtccg gcccgagcag cgggatgaga cgggtcttgg caaagcccgg
      241 gatcggcgcc ttggcgagga tggcgagatc agtcatcgcg cggccggtag ccgtaagcga
      301 gcgccagcgc gcgcgggtcg gcgccgaaga agaaggcaag gcgcaggcgc cacatggcga
      361 ggatcgtgcg gaccgggcca tgccgctccc agcgccgccc ggaggtcgtg acgcagtcct
      421 cgaggcaggc cggcggcgac aggcgcctga gggcgcgcga cagcacgatg tcctccatga
      481 gcgggatatc ggcatagccc ccgaccgcct cgaacgcccg ccgggtgacg aagatggcct
      541 ggtcgccggt ggcgatgccg gtcagccgcg agcgtgcgtt catcagcgcc gccacgaccg
      601 gcagcaagac atgtcgcccg tcgattcgca cgtcgaaacg gccccaggca tggccgcccg
      661 cgacagcgcg cgcgacagcg agatcggcct cggccggcag ccgcgtatcg gcgtgcagga
      721 acagaaacac gtcgcctgcg gcgacgcgcg ccccggcatt catctggctg gcgcgcccgc
      781 gtggcgcggc gatcacgtgg tcggccccct ccccggcttc ccggatggtg gcgtcgtcgc
      841 tgccgccgtc ggcgacgatc acctcggcgc cgcgcgcccg caacggcgcc agcgccgcga
      901 ggtgagccct gatcgtggcg ccctcgttta ggaccggcac gatcaccgag agcttcattc
      961 ggcagcctcg cgcagggcgc cgccgcagct cgacccctgg cccgccgtgc acccgtagca
     1021 atgaccggcg acgcggatcc gtcccccctc gaagtcgcgg ctgaggaggt cgcgcagatg
     1081 cgggcggccg cccacgggta gcttcagcat ctggttgaag tcgcagtcgt agaggtagcc
     1141 ctggtagtcg acgctgagca gcgaccggca catgacgccg gcgaggttgg cgtcgcggtg
     1201 cgcgcctttg agcaaggcca tgtagtcgtg gaactggcct ttcgagacga gcatcgagcc
     1261 gaaccgctgg atcggcatgt tggcgagcac gaacagctcg ttgaagacga tgccgtagcg
     1321 ctctccgaga atgcgcttgt agtcggcttc gagcgccgtc tggcccggcg gcaggctcgg
     1381 cccttgcggg ttgaagacga ggttgaggac gaggccgctg cgcgggtcgc cgtagccgac
     1441 cgcgttgagc cgccgcaggc cctcgacgct cttgtcgaac acgcccttgc cgcgctgccg
     1501 gtcgacattg tcctcgaggt agcagggcag cgaggcgacc acgtcgatct ggttgccggc
     1561 caggaacgcc gccaggtcc
//
LOCUS       DATAIQ010000303         2413 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_430839, whole genome shotgun sequence.
ACCESSION   DATAIQ010000303 DATAIQ010000000
VERSION     DATAIQ010000303.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2413)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2413)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2413
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_430839"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..477)
                     /locus_tag="VHN20_05190"
     CDS             complement(<1..477)
                     /locus_tag="VHN20_05190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020093797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX2725194.1"
                     /translation="MGDFIREVDEEYRRDRIMQIWKRYSGVIVALAVLLVAAVGGWRY
                     WQHVERQRAEEAAVRYEDALRLARDGKSEDAGKALEALAKDAPAGYQILSRFRLAAEL
                     GKQNPEDGAKAFDALAGDSRVEPVMQDLARLRAAMLRFDAADASAVQPALERLATPT"
     gene            complement(609..776)
                     /locus_tag="VHN20_05195"
     CDS             complement(609..776)
                     /locus_tag="VHN20_05195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725195.1"
                     /translation="MKQAFKLAFGLLLTLGLTWLYFFLFGTREEYVIIWMMALIGTFL
                     GPVLAKFFRRA"
     gene            complement(780..1607)
                     /gene="panB"
                     /locus_tag="VHN20_05200"
     CDS             complement(780..1607)
                     /gene="panB"
                     /locus_tag="VHN20_05200"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014495660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003864 - 3-methyl-2-oxobutanoate
                     hydroxymethyltransferase activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HEX2725196.1"
                     /translation="MSVQAETRRLTAPDIRARKGGEPIVALTSYHAHTARLVDAYADV
                     ILVGDSLGMVMHGFESTVPVTLDMMILQGHAVMRGSRRALVVVDLPFGSYEESREAAF
                     RSAARVLKETGCGAIKLEGGVRMAETIRFLTERGIPVMGHIGLTPQSILALGSFKAQG
                     RDRADWPAILADARAVAEAGAFSVVVEAVAEPLGREITNAVAIPTIGIGASVACDGQI
                     LVLEDMLGLSPRVPKFVKRYGDIGPSIANAIETYAKEVRERTFPAPEHTYPERKPGT"
     gene            complement(1712..2299)
                     /locus_tag="VHN20_05205"
     CDS             complement(1712..2299)
                     /locus_tag="VHN20_05205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NnrU family protein"
                     /protein_id="HEX2725197.1"
                     /translation="MAILILGLIVFIGAHAFTMARAARARAIARLGEGPYKGLYSLVS
                     LIGLVLIVWGYGSYRAGGYIQLWAPPVWTRHLALPLVWLAFVAMVSAYFPGRIRRALK
                     HPMLAGLKIWALAHLLANGDLGSIILFGTLLAWAVVARIAAKRRDEVRDHGGPVAEPA
                     GWRNDVFAIVIGTAAYLAFLIWLHPLLIGVPALPR"
BASE COUNT          411 a          807 c          849 g          346 t
ORIGIN      
        1 ggtcggggtg gcgagccgtt cgagcgccgg ctgcaccgcc gacgcatcgg cggcgtcgaa
       61 gcgcagcatg gcggcacgca gacgcgccag gtcctgcatc accggctcga cgcgggagtc
      121 gccggccagg gcgtcgaacg ccttggcgcc gtcttcggga ttctgcttgc cgagctcggc
      181 ggcgagccgg aaccgcgaca ggatctggta gccggccggc gcatccttgg cgagcgcctc
      241 gagcgccttt ccggcgtcct cgctcttgcc gtcgcgcgcc aggcgcagcg cgtcctcgta
      301 gcgcaccgcc gcttcctcgg cgcgctggcg ctcgacatgc tgccagtaac gccagccgcc
      361 gacggcggcg acgagcagga cggcgagcgc aacgatcacg ccgctgtagc gcttccagat
      421 ctgcatgatc cggtcgcggc ggtattcctc gtcgacttcg cggataaaat cgcccatctc
      481 acgtcccgtg gcggcttgcc cccgccctga tattgggccg gtcgcctagc acgcctattc
      541 ccgctttgaa agcttgggcc actggacagg tagtcgcccc agtctacgag gcagcgtgcg
      601 gcactcgatc aagcacgccg gaaaaacttc gcaaggaccg gccccaagaa cgttccgatc
      661 agagccatca tccagatgat gacgtactct tccctcgtgc cgaacaggaa gaagtagagc
      721 caggtcaggc caagggtcag cagcaggcca aaggctaatt taaaggcctg cttcatcagt
      781 caggtcccgg gcttgcgctc ggggtaggta tgctcgggag ccgggaacgt ccgctcgcgc
      841 acctccttcg cgtaggtctc gatggcgttg gcgatcgagg ggccgatatc gccgtagcgc
      901 ttgacgaatt tgggcacgcg cgggctgagc ccgagcatgt cctcgagcac gagaatctgg
      961 ccgtcgcagg cgaccgaggc gccgatgccg atggtcggga tggcgaccgc gttggtgatc
     1021 tcacggccga gcggctcggc gacggcttcg acgacgaccg agaaggcgcc ggcttccgcc
     1081 accgcccggg cgtccgccag gatggccggc cagtcggccc ggtcgcggcc ctgggccttg
     1141 aacgagccga gcgcaaggat cgactgcggc gtcagcccga tatggcccat gaccggaatg
     1201 ccgcgctcgg tcaggaagcg gatggtctcg gccatgcgca cgccgccttc gagcttgatg
     1261 gcgccgcagc cggtctcctt gaggacgcgc gccgccgagc ggaacgccgc ctcgcggctc
     1321 tcctcgtagg agccgaacgg cagatcgacc acgaccagcg cccgccgcga accgcgcatc
     1381 accgcgtggc cctgcaggat catcatgtcg agggtcaccg gcacggtcga ctcgaagccg
     1441 tgcatcacca tgccgagcga gtcgccgacc aggatcacgt ccgcataggc gtcgacgaga
     1501 cgggcggtat gggcgtggta cgaggtgagc gcgacgatcg gctcgccgcc cttgcgggcg
     1561 cggatgtcgg gggccgtcag gcggcgggtc tcggcttgga cagacatgaa gcagacctct
     1621 aaagcatttt ccggcgaagt ggtggccggt tcgccgaaga aaatgcgttc taggtgaacg
     1681 cgagagccgg tccgcgtcag ccggaacggc tctagcgggg cagcgcggga acgccgatca
     1741 ggagcgggtg gagccagatc aggaaggcca gataggcagc cgttccgatc acgatggcga
     1801 agacgtcgtt gcgccagccg gccggctcgg cgacgggccc gccatggtcg cggacctcgt
     1861 cgcgccgctt ggcggcgatg cgggccacga ccgcccaggc gagcagggtc ccgaacagga
     1921 tgatggagcc gaggtcgccg ttggcgagga gatgggcgag cgcccagatc ttgaggcccg
     1981 ccagcatcgg gtgcttgagc gcccgcctga tccggccggg gaaataggcg gacaccatcg
     2041 ccacgaaggc gagccacacc agcggcaggg ccaggtgacg ggtccacacc ggcggggccc
     2101 agagctggat gtagccgccc gcccggtaag agccgtaacc ccatacgatc aggaccagcc
     2161 cgatcagcga caccagcgag tagaggccct tgtatggccc ctccccgagc cgggcgatgg
     2221 cccgggcgcg cgccgcgcgc gccatggtga aggcgtgcgc gccgatgaat acgatcaatc
     2281 ccaggatcag aatggccatg ggcgcttttt gcgccatccg gccgcgcagc gccagagcac
     2341 ccgcccgggg aaaggttact ttgctgtcga gcccccggtt cggcagcggg cagggccccg
     2401 aggtgttcag ccg
//
LOCUS       DATAIQ010000304         1599 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_53305, whole genome shotgun sequence.
ACCESSION   DATAIQ010000304 DATAIQ010000000
VERSION     DATAIQ010000304.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1599)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1599)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1599
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_53305"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1189
                     /locus_tag="VHN20_05210"
     CDS             <1..1189
                     /locus_tag="VHN20_05210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012317791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX2725198.1"
                     /translation="DHEHRRKKTIGVKEIEATVATMARIPPKTVSKDDAEVLAHLDET
                     LKRVVYGQDKAIEALTASIKLARAGLRDAEKPIGAYLFAGPTGVGKTEVAKQLASSLG
                     VELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDGIDQHPHCVLLLDEIEKAHP
                     DLFNILLQVMDHGKLTDHNGKQVDFRNVIIIMTTNAGAADLAKAAYGFTQNKREGDDT
                     EAINKLFAPEFRNRLDSVISFGRLPKEVVAKVVDKFVLQLEAQLADRNVTIELTDEAR
                     DWLIEHGYDETMGARPMARLIQSTIKTPLADDVLFGRLKNGGAVRVIVLRPEDGPETL
                     GFEYPEGPVTPKPEKDVTDAVKKRAKRKPRLYTKKPPKPKGPGGNGSGGVRTVPKVPL
                     VRA"
     gene            1186..1437
                     /locus_tag="VHN20_05215"
     CDS             1186..1437
                     /locus_tag="VHN20_05215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017483278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725199.1"
                     /translation="MTAEVHDAQLEPAPVPPARRKSWREQRWERRRRRYFFEEIVGWI
                     AVPLILLGVYWAVMGVLDAMGTSPAALIQGVQTVLQGIH"
     gene            complement(1487..>1599)
                     /locus_tag="VHN20_05220"
     CDS             complement(1487..>1599)
                     /locus_tag="VHN20_05220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016918993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HIT family protein"
                     /protein_id="HEX2725200.1"
                     /translation="FHVLPRWEGVGLRPPGTMAPAETLAQHASRIRAALT"
BASE COUNT          295 a          546 c          533 g          225 t
ORIGIN      
        1 ggatcacgag caccgccgca agaagaccat cggcgtcaag gagatcgagg ccacggtcgc
       61 gaccatggcg cggatcccgc ccaagaccgt gtcaaaggac gacgccgagg tgctggcgca
      121 cctcgacgag acgctgaagc gcgtcgtcta cggccaggac aaggcgatcg aggccctgac
      181 cgcgtcaatc aagctcgcgc gtgccggcct gcgtgacgcg gagaagccga tcggcgccta
      241 cctgttcgcc ggcccgaccg gcgtcggcaa gaccgaggtg gccaagcagc tcgcctcgag
      301 ccttggcgtc gagctcttgc gcttcgacat gtccgaatac atggagcgcc acaccgtcag
      361 ccgcctgatc ggtgcgcctc ccggctatgt cggcttcgac cagggcggcc ttctcaccga
      421 cggcatcgat cagcacccgc attgcgtgct gctgctcgac gagatcgaga aggcgcatcc
      481 ggacctgttc aacatccttc tgcaggtcat ggaccacggc aagctcaccg accacaacgg
      541 caagcaggtc gacttccgca acgtgatcat catcatgacc acgaatgccg gcgcggccga
      601 tctcgccaag gccgcctacg gcttcacgca gaacaagcgc gagggcgacg acacggaagc
      661 gatcaacaag ctgttcgcgc cggagttccg caaccgtctc gactcggtga tctcgttcgg
      721 ccgcctgccg aaggaggtcg tcgccaaggt cgtcgacaaa ttcgtgctgc agctcgaggc
      781 gcagctggcg gaccgcaacg tgacgatcga gctgaccgac gaggcgcgcg actggctcat
      841 cgagcacggc tacgacgaga cgatgggcgc ccgcccgatg gcccggctga tccagtcgac
      901 catcaagacc ccgctcgccg acgacgtcct gttcgggcgg ctcaagaacg gcggcgcggt
      961 gcgcgtcatc gttctcaggc cggaggacgg gcccgagacg ctcggcttcg aatatccgga
     1021 aggtccggtc acgccgaagc cggagaagga cgtcaccgac gccgtcaaga agcgcgccaa
     1081 gcgcaagccg cggctctaca ccaaaaagcc ccccaagccg aaagggccgg ggggcaacgg
     1141 cagcggcggc gtgcgtacgg ttcctaaggt gccgctggtt cgcgcatgac cgccgaagtc
     1201 cacgacgctc agctcgagcc cgcaccggtg cctccggcgc ggaggaagtc ctggcgcgag
     1261 caacgctggg agcgccgccg gcgacgctac ttcttcgagg agatcgtcgg ctggatcgcg
     1321 gtgccgctga tcctgctcgg cgtgtattgg gccgtcatgg gcgtgctcga cgcgatgggc
     1381 acctcaccgg cggcgctgat ccagggcgtg caaacggtgc ttcagggtat ccactgagcg
     1441 ccgcgatccg tgccccgccc acgggagagg cgcggcaccg gagcggttac gtcagggcgg
     1501 cccggatgcg gcttgcgtgc tgtgccaagg tctcggccgg agccatcgtt ccgggcggtc
     1561 gcaaccccac gccttcccaa cgcggcagca cgtggaagt
//
LOCUS       DATAIQ010000305         5766 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_191633, whole genome shotgun sequence.
ACCESSION   DATAIQ010000305 DATAIQ010000000
VERSION     DATAIQ010000305.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 5766)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5766)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5766
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_191633"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(72..1649)
                     /locus_tag="VHN20_05225"
     CDS             complement(72..1649)
                     /locus_tag="VHN20_05225"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEX2725201.1"
                     /translation="MSFAELGLSDKVLQAVSASGYTEPTPIQTQAIPHVLARRDVLGI
                     AQTGTGKTAAFTLPMLTLLETGRARARMPRTLILEPTRELAAQVEESFERYGVNHRLN
                     VALLIGGVSFGDQDMKITRGVDVLIATPGRLLDHFERGKLLLTGVELLVIDEADRMLD
                     MGFIPDVEKIVGLLPKQRQTLFFSATMPPEITRLADQFLHNPVRVEASRPATTASTIT
                     QSLIATGRQAHEKRESLRDLIRGAPELKNAIIFCNRKRDVAIVHHSLLRHGFSVAALH
                     GDMDQRARMAALDSFRTGEVKLLVASDVAARGLDIPAVSHVLNYDVPHHAEDYVHRIG
                     RTGRAGRTGHAVTLVAPGDEKSLAAIEKLIGQAVAWEGPPLAEGGADERPSRNERGRG
                     RERKSGRDGGRRAGREGGRRPSGEGDRPRQAAADQPPLPDRPRKAVAEARGGRGEARE
                     GRGEGREGRGEAREARGEGRREARQEGRREGRPGRPEGRQERPRPETDRPVTGLGDHI
                     PAFLMRPAVSKGPKPES"
     gene            complement(1973..2776)
                     /locus_tag="VHN20_05230"
     CDS             complement(1973..2776)
                     /locus_tag="VHN20_05230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020185327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX2725202.1"
                     /translation="MSLRVTILGCGSSGGVPRVGSGWGACDPANPKNRRRRCSILVER
                     IGPNGTTAVLVDTSPDLREQLLDAGVTRLDAVLFTHEHADHTHGIDDLRPLVIHMRRR
                     IPVYADHTTGELLRLRFGYCFDTPVGSDYPPILTEHRIKTGVPVEIDGPGGVLSGVPF
                     RMIHGGGQALGFRFGGLAYASDVSAMPDESLAELRGLDVLVIDALRYTPHPTHFSVVE
                     ALALIEQLKPRRAVLTNLHTDIDYAALAGHGPDHVEPAFDGMRIDLPTP"
     gene            complement(2773..3582)
                     /locus_tag="VHN20_05235"
     CDS             complement(2773..3582)
                     /locus_tag="VHN20_05235"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HEX2725203.1"
                     /translation="MLIDSHCHLDYPGLAENVPELIRRARDAGVGRMVTISTHIGRFE
                     AYRALAEANDEVFFSVGTHPHHAGEEPDVAASEIVALARHPRCVAVGESGLDYHYDRS
                     PRDIQRRVFRTHIAAARDARLPLVIHAREADDEMIEILTDETRRGRFDAVLHCFSSGA
                     RLAEAGVALGFYVSFSGILTFKRSDELRRIAAAVPADRLLVETDAPYLAPEPYRGKGN
                     EPAYVAHTARRLAEVVGMTPEELGRVTTDNFYRLFAKAAAADGLVLEAASS"
     gene            complement(3620..4954)
                     /locus_tag="VHN20_05240"
     CDS             complement(3620..4954)
                     /locus_tag="VHN20_05240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="family 1 glycosylhydrolase"
                     /protein_id="HEX2725204.1"
                     /translation="MAAPYFIFATGVENSCPTIGHGRTRMDEMEKCGHYKHWRTDFEL
                     LQELDICYLRYGPPIHTTFLGPGRYDWDFADETFGCLKQRDVIPIVDLCHFGVPDWIG
                     DFQNPDFPKLFADYARTFAMRFPWVQLYTPVNEMFICATFSAAYGWWNEQLASNRAFV
                     TALKHLVKANVLAMAAILDVRPDALFIQSESSEYFHAESPKAIKPAEILNSRRFLSLD
                     LNYGKRVDSEMYEFLMENGMTRDEYHFFLNNRLKHHCVMGNDYYVTNEHRVAADGRHT
                     ASGEVFGYDGITRQYYDRYKLPVMHTETNLCEGPNGDEAVNWLWKQWANVLRVRNDGV
                     PIVGFTWYSLTDQVDCDTALREDNGRVNPLGLYDLDRNIRNIGKAYRRLIRDWREVLP
                     AQSVCLVVPVVPPAEYADPLAVERRGKAEERKKLAEEAREGAFPGPASPPPR"
     gene            complement(4996..>5766)
                     /locus_tag="VHN20_05245"
     CDS             complement(4996..>5766)
                     /locus_tag="VHN20_05245"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003602058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004825 - methionine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HEX2725205.1"
                     /translation="HIIGKDIVRFHAVYWPAFLMSAGLPLPRRVFGHGFLFNRGEKMS
                     KSVGNVIDPFALADAYGVDQLRYFFLREVPFGQDGNYSHEAIVNRINADLANDLGNLA
                     QRSLSMIHRNCDAAIPEPGELSAADEAILATAAALPARARGAMQDFALHTILAEIWTV
                     VAEANRYFASQEPWTLRKTDPARMNTVLYVTAQVLGTIAIMAQPFIPAGAEKLLDLLA
                     VPAGERSFAQAGGRRLPKPGTAIRQPEAIFPRYLEREA"
BASE COUNT          896 a         1893 c         2045 g          932 t
ORIGIN      
        1 cctcggcggg accagggctg atctggccca aagtcagccc gaacccccga aaaaacactt
       61 aaaataatag gtcaggattc cggctttgga cccttggaaa ccgccggacg catcaaaaac
      121 gcgggaatgt gatctccgag cccggtcacc ggccggtccg tctcgggcct tgggcgctcc
      181 tggcgtcctt cgggccgccc cggccgccct tcccggcgcc cctcctggcg ggcttcccga
      241 cggccctcgc cacgggcctc ccgggcctcg ccacggccct cccgaccctc gccacggccc
      301 tcccgggcct cgccacgccc cccccgggcc tccgcaacgg ccttcctggg ccggtcgggt
      361 aggggaggct ggtcggcggc ggcctggcgt ggccggtcgc cctcgccgct ggggcgacgg
      421 ccgccctcgc ggcccgcccg gcggccgccg tcgcggccgg atttgcgctc gcggccccgg
      481 ccgcgctcgt tccttgacgg acgctcatcc gccccgcctt cggcgagggg agggccctcc
      541 catgccacag cctgcccgat cagcttctcg atcgccgcga gggacttctc atcgcccggc
      601 gcgaccaagg tgacggcgtg gccggtacgc cccgcgcggc cggtccgccc gatgcggtgc
      661 acgtagtcct cggcatgatg cggcacgtcg taattgagca cgtggctcac cgccgggatg
      721 tcgaggccgc gcgccgcgac gtcgctggcg accagcagct tgacttcgcc ggtgcggaag
      781 ctgtcgagcg ccgccatgcg cgcccgctgg tccatgtcgc catgcagggc ggcgacgctg
      841 aagccgtgcc gcagcagcga atgatggacg atggcgacgt cgcgcttgcg gttgcagaag
      901 atgatcgcgt tcttcagctc gggcgcaccg cggatcaggt cgcgcaggct ctcgcgcttc
      961 tcgtgcgcct gccggccggt ggcgatgagg ctttgcgtga tcgtcgaggc cgtcgtcgcc
     1021 ggccgggagg cctcgacccg caccgggttg tgcaggaact ggtcggccag ccgtgtgatc
     1081 tcgggcggca tcgtggccga gaagaacagc gtctgccgct gctttggcaa cagcccgacg
     1141 atcttctcga catcggggat gaagcccatg tcgagcatgc ggtcggcctc gtcgatgacg
     1201 aggagctcga cgcccgtgag cagcagcttg ccgcgctcga aatggtcgag cagacggccg
     1261 ggcgtggcga tcaggacgtc gacgccgcgc gtgatcttca tgtcctggtc gccgaacgat
     1321 acgccgccga tcagcagcgc cacgttcagg cggtggttta cgccgtagcg ctcgaagctt
     1381 tcctcgacct gggcggcgag ctcgcgggtc ggctccagga tcagggtgcg cggcatgcgc
     1441 gcccgggccc ggccggtctc gagcagcgta agcataggca gcgtgaaggc cgcggtcttg
     1501 ccggtgccgg tctgggcgat gccgaggacg tcgcggcgcg cgaggacatg cgggattgcc
     1561 tgggtctgga tcggcgtcgg ctcggtatag ccggaggcgc tgaccgcctg caggactttg
     1621 tcgctgagac ctagttcggc gaaggacatt gacgatgaaa ccatgcgcgg acctaagccg
     1681 cgggaaatcg aggtgagtct gcgaggaaac gaacggatgc ggcgctttgt ttcgctgaaa
     1741 gctcggcgtc cgcgtcgcgg cgcgaccata ggccggcagg ccggcttgtc aatcgcgcgg
     1801 gcggggtggg acccgcgacc ggccggcaag gccccgagcc cgatcgggca tccgccggcg
     1861 gggccggata ggggcctccc tcccatcggc aattcgcata agatatatta tggaaccaag
     1921 cccaaggggg gctgagaggg gggtggtttt cggccggctt ggcttccggg agctatggcg
     1981 tcgggagatc gatgcgcatg ccgtcgaacg ccggctcgac atggtccggg ccgtgcccgg
     2041 ccaaggcggc gtagtcgata tcggtatgga ggttggtcag caccgcgcgc cgcggcttca
     2101 gctgctcgat cagcgccagc gcctcgacga ccgagaaatg cgtcggatgc ggcgtatagc
     2161 gcagcgcgtc gattaccagc acgtcgaggc cgcgcagctc cgccaggctt tcgtccggca
     2221 tcgcgctgac gtcgctcgcg taagccaggc cgccgaaccg gaagccgagc gcctggccgc
     2281 cgccgtggat catgcggaat ggaacgccgc tcaggacgcc gccgggcccg tcgatctcga
     2341 ccggcacgcc ggtcttgatc cggtgctcgg tcaggatcgg cggataatcg ctgccgaccg
     2401 gcgtgtcgaa gcaatatccg aagcgcaggc gcaaaagctc gccggtcgta tggtcggcat
     2461 agacgggaat ccgccgccgc atgtggatca cgagcggcct caggtcatcg atgccatgcg
     2521 tatggtcggc gtgctcgtgc gtgaacagca ccgcgtccag gcgcgtcacg ccggcgtcga
     2581 gaagctgctc gcgcaggtcc ggcgacgtgt cgaccagcac ggccgtggtg ccgttcgggc
     2641 cgatgcgctc gacgaggatc gagcagcggc gccgccggtt cttcggattg gccggatcgc
     2701 aggcgcccca gccggaaccg acccgcggca cgccgccgga cgagccgcag ccgaggatcg
     2761 tgacgcgcag gctcatgaag aagcagcctc gagcacgagg ccgtcggcgg ccgcggcttt
     2821 ggcgaagagc cggtagaaat tgtcggtggt cacgcggcca agctcctcgg gcgtcatgcc
     2881 gacgacctcg gcgagacggc gggccgtgtg ggcgacgtaa gccggctcgt tgcctttgcc
     2941 gcgatacggc tcgggcgcga gataaggcgc atcggtctcg acgagcagcc ggtcggccgg
     3001 gaccgccgcc gcgatgcgcc gcaattcgtc ggagcgcttg aacgtgagga tgccggagaa
     3061 ggagacgtag aagccgagcg cgacgccggc ttcggccagc ctcgctcccg acgagaagca
     3121 gtgcagcacg gcgtcgaagc gccctcgccg cgtctcgtcg gtcaggatct cgatcatctc
     3181 gtcgtcggct tcgcgcgcgt ggatcacgag cggcagccgc gcgtcgcgcg cggccgcgat
     3241 gtgggtccgg aagacgcgcc gctggatgtc gcgcgggctg cggtcgtagt ggtagtcgag
     3301 cccggactcg ccgacggcga cgcagcgcgg atgacgcgcc agcgcgacga tctcgctggc
     3361 ggcgacgtcg ggctcctcgc cggcatggtg cggatgcgtc ccgaccgaga agaagacctc
     3421 gtcgttcgct tcggcgagcg cgcgataggc ctcgaagcgg ccgatatggg tcgagatcgt
     3481 caccatgcga ccgacgcccg catcgcgggc gcgccggatc agctcgggga cattctcggc
     3541 caaacccgga taatcgaggt ggcaatggct gtcgatcagc atgtggggtc tataggccgc
     3601 cgccagccgg gaactcaagt catcgtgggg gcgggctggc cggcccgggg aacgcccctt
     3661 cccgcgcctc ctcggcgagt ttcttgcgct cttcggcctt gccgcgacgc tcgacggcga
     3721 gcggatcggc gtattcggcg ggcggcacca ccgggacgac caggcagacg ctctgcgccg
     3781 gcagcacctc acgccagtcg cggatcagcc gcctgtaggc tttgccgatg ttacggatgt
     3841 tgcggtcaag gtcgtacagc ccgagcggat tgacgcggcc gttgtcctcg cgcaatgccg
     3901 tgtcacagtc gacctggtcg gtcagcgaat accaggtgaa gccgacgatc ggcacgccgt
     3961 cgttgcgcac gcgcaggacg tttgcccact gcttccagag ccagttcacg gcctcgtcgc
     4021 cgttcgggcc ttcgcacaga ttggtctccg tgtgcatcac gggcagcttg tagcggtcgt
     4081 aatattggcg cgtgatcccg tcgtacccga acacctctcc cgacgccgtg tgccggccgt
     4141 cggcggccac gcggtgctcg ttggtgacgt aataatcgtt gcccatgacg cagtgatgct
     4201 tgaggcgatt gttgaggaag aaatgatact cgtcgcgggt catgccgttt tccatcagga
     4261 actcgtacat ctccgaatcg acgcgcttgc cgtagttgag atcgagcgag aggaagcggc
     4321 gtgaattgag gatctcggcg ggcttgatcg ccttcgggct ctcggcgtgg aaatactcgc
     4381 tcgactcgct ctggatgaac agcgcgtccg gccgcacgtc gaggatcgcc gccatcgcca
     4441 aaacattcgc cttgaccaga tgcttcaagg ccgtgacgaa cgcccgattg ctcgccagct
     4501 gctcgttcca ccagccgtag gccgccgaga aggtggcgca gatgaacatc tcgttgaccg
     4561 gcgtgtagag ctgcacccag gggaagcgca tggcgaaggt gcgcgcgtaa tcggcgaaca
     4621 gcttcgggaa gtcgggattc tggaaatctc cgatccagtc gggcacgccg aaatggcaga
     4681 gatcgacgat cgggatgacg tcgcgctgct tcaggcagcc gaaggtctcg tcggcgaagt
     4741 cccagtcgta gcgtcccggc ccgaggaacg tggtgtggat cggcggtccg tagcgcaggt
     4801 agcagatgtc gagctcctgc agcagctcga agtcggtgcg ccagtgcttg tagtggccgc
     4861 acttctccat ctcgtccatg cgcgtgcggc catgcccgat ggtcgggcag ctgttctcga
     4921 cgccggtcgc gaagatgaag taaggcgccg ccatgcgcga tccccttgcg agcaccgcgc
     4981 gccgccgaac gcggcctatg cttcgcgttc gagataacgc gggaagatcg cctcgggttg
     5041 ccggatggcc gtccccggct tgggcaggcg gcgccccccg gcctgggcga agctgcgctc
     5101 gccggccggc acggccagca ggtcgaggag cttttcggcg ccggccggga tgaatggttg
     5161 cgccatgatg gcgatcgtgc ccagaacctg cgcggtcacg taaagcacgg tgttcatgcg
     5221 cgccggatcg gtcttgcgca gcgtccaggg ctcctgggac gcgaagtagc ggttcgcctc
     5281 ggcgaccacg gtccagatct cggccaggat cgtgtgcagg gcgaaatcct gcatcgcccc
     5341 cctcgcccgc gcgggcagcg ccgcggccgt cgccaggatc gcttcgtccg cggcgctcag
     5401 ctcgcccggt tcgggaatcg cggcgtcgca attgcggtgg atcatcgaca gcgagcgctg
     5461 cgcgaggttg ccgagatcgt tggcgaggtc ggcgttgatg cggttgacga tcgcctcgtg
     5521 cgagtagttg ccgtcctggc cgaacggcac ctcgcgcagg aagaaatagc gcagctggtc
     5581 gacgccgtag gcgtcggcga gcgcgaacgg gtcgatcacg ttgccgaccg atttcgacat
     5641 cttctcgccg cggttgaaca gaaagccgtg gccgaagacg cgacgcggca gcggcagccc
     5701 ggcggacatc aggaaggccg gccagtagac cgcgtggaag cggacgatgt ccttgccgat
     5761 gatgtg
//
LOCUS       DATAIQ010000306         2019 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_53309, whole genome shotgun sequence.
ACCESSION   DATAIQ010000306 DATAIQ010000000
VERSION     DATAIQ010000306.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2019)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2019)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2019
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_53309"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            43..2001
                     /locus_tag="VHN20_05250"
     CDS             43..2001
                     /locus_tag="VHN20_05250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018453134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="propionyl-CoA synthetase"
                     /protein_id="HEX2725206.1"
                     /translation="MSTKAPGVSRYPETYERWRADPAGFWADAAREIDWIRPADKVFD
                     PDAGVYGRWFAGALCNTCHNAVDRHVAAGRGEQAAIIYDSPVTGTKRRLTYSQLKAET
                     AVLGAVLRDLGVGKGDRVIIYMPMIPEAAIAMLACARIGAIHSVVFGGFAAKELATRI
                     EDAAPKVILSASCGIEVNRVVPYKPLLDEAIRLSSVAPETCLVLQRPQAPAALVAGRD
                     RDWQDTVDAARAAGKAADCVPVAATDPLYILYTSGTTGRPKGIVRDNGGHMVALKWSM
                     KNFYGIEPGEVFWTASDVGWVVGHSYIVYAPLLHGCTSVLYEGKPVGTPDAGAFWRVI
                     AEHGAAAMFTAPTAFRAIKKEDPQGTHPRQHDLSKFRALFLAGERADPDTVKWAEGIL
                     GVPVIDHWWQTETGWPIAGNPLGLGMLPVKYGSPTVPMPGYDVVIVDDAGKPAAHGAM
                     GSIVVKLPLPPGCLPTLWNADARFLESYLAAFPGHYATADAGFIDEDGYVFVMGRTDD
                     IINVAGHRLSTGGMEEVLASHPAVAECAVIGIRDVLKGEAPCGFVVLKSGVARAPAEI
                     EQELVGLVREKIGPVAAFKLAITVARLPKTRSGKILRGTMKKIADGEAWNMPATIDDP
                     AILDEIGEALRGRGVGADEAGPAATARA"
BASE COUNT          335 a          705 c          694 g          285 t
ORIGIN      
        1 cttgccgcgg cgagacaaga agaacgtcct cgggaggaca tcatgtcgac caaggcgccg
       61 ggcgtcagcc gctacccgga aacgtacgag cgctggcggg ccgacccggc cgggttctgg
      121 gcggacgcgg cgcgcgagat cgactggatc cggccggccg acaaggtgtt cgatccggac
      181 gccggcgttt atgggcgctg gttcgcgggc gcgctctgca acacgtgcca caatgccgtc
      241 gaccggcacg tcgcggccgg ccgcggcgag caggcggcga tcatctacga cagcccggtc
      301 accggcacga agcgcaggct gacctacagc cagctcaagg ccgaaacggc cgtgctcgga
      361 gccgtgctgc gcgatctcgg cgtcggcaag ggcgaccgcg tcatcatcta catgccgatg
      421 atcccggaag cggcgatcgc catgctcgcc tgcgcgcgca tcggcgcgat ccactcggtg
      481 gtgttcggcg ggttcgcggc caaggagctt gcgacgcgca tcgaggacgc cgcccccaag
      541 gtgatcctgt ccgcctcatg cggcatcgag gtcaatcgcg tcgtgccgta caagccgctg
      601 ctcgacgaag ccatcaggct gtcgagcgtc gcgcccgaaa cctgcctggt cctgcagcgc
      661 ccgcaggcgc cggcagcgct cgtggccggc cgcgaccgcg actggcaaga caccgtcgac
      721 gccgcccgag ccgccggcaa agcggcggat tgcgtgccgg tcgccgcgac cgatccgctc
      781 tacatcctct acacgtccgg cacgaccgga aggcccaaag gcatcgtgcg cgacaacggc
      841 ggccacatgg tcgcgctgaa atggtcgatg aagaatttct acggcatcga gccgggcgag
      901 gtgttctgga ccgcgtccga cgtcggctgg gtcgtcggcc attcctacat cgtctacgcg
      961 ccgctgctgc acggctgcac gagcgtgctc tacgaaggca agccggtggg caccccggat
     1021 gcaggcgcct tctggcgcgt catcgccgag cacggcgccg ccgcgatgtt caccgcgccg
     1081 accgcgttcc gcgccatcaa gaaggaagac ccgcagggca cgcacccgag gcagcatgac
     1141 ctgtcgaaat tccgcgcctt gttcctggcc ggcgagcgcg ccgaccccga cacggtgaaa
     1201 tgggccgaag gcatcctcgg cgtgccggtg atcgatcatt ggtggcagac ggaaaccggc
     1261 tggccgatcg ccggcaaccc gctcgggctc ggcatgctgc cggtcaaata cggttcgccg
     1321 acggtgccga tgccgggcta cgacgtcgtc atcgtcgacg acgccggcaa gcccgcggcg
     1381 cacggcgcga tgggctcgat cgtcgtcaag ctgccgcttc ctcccggctg cctgccgacg
     1441 ctgtggaacg ccgatgcgcg tttcctggag agctacctcg ctgcctttcc cggccactac
     1501 gccaccgccg atgccggctt catcgacgag gacggctacg tgttcgtgat gggccgcacc
     1561 gacgacatca tcaacgtcgc cggccatcgc ctctcgaccg gcggcatgga ggaggtgctg
     1621 gcctcgcatc cggcggtcgc cgaatgcgcc gtgatcggca tcagggacgt gctcaaaggc
     1681 gaagcgccgt gcggcttcgt cgtgctgaaa tccggcgtcg cgcgggcgcc cgccgagatc
     1741 gagcaggagc tcgtcggcct ggtgcgcgaa aagatcgggc cggtcgccgc cttcaagctc
     1801 gccatcaccg tggcgcgcct gccgaagacg cgatcgggca agatcctgcg cggaaccatg
     1861 aagaagatcg ccgacggcga ggcctggaac atgccggcca cgatcgacga tcctgccatc
     1921 ctcgacgaga tcggcgaggc gctcaggggc aggggcgtcg gcgccgacga ggcggggccc
     1981 gcggcaaccg ccagggcatg atccgaaagc ctcggcgac
//
LOCUS       DATAIQ010000307         1820 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_15859, whole genome shotgun sequence.
ACCESSION   DATAIQ010000307 DATAIQ010000000
VERSION     DATAIQ010000307.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1820)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1820)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1820
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15859"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            90..1220
                     /locus_tag="VHN20_05255"
     CDS             90..1220
                     /locus_tag="VHN20_05255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002967775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX2725207.1"
                     /translation="MSQGAVEWKRAAALAGPDERLRKTSLATRAMRRPELGAAAGLVL
                     VTIFFLSTADASMFTLAGIMNVLAPASQLGILAVAAALLMIGGEFDLSIGSMVAFAGL
                     IFGALLVLSGLPLLAAIALTFVLAAFLGGVNGQIVIRTRLPSFIVTLAFLFILRGLSL
                     VGLKWTTGGSTQLRGIGERAGEGVVREIFSGVAFEGLFAWLAAHDVIAKFPNGAPTVT
                     GVPVSILWFVGFAALATWVLLRTRIGNWIFAAGGDANAARNSGVPVDRVKTGLFMLTA
                     CAATLVAVLTVLDAGSTDARRGFQKEFEAIIAAVIGGCLLTGGYGSAIGAFFGAVIFG
                     MVSIGLTYTRFDSDWFQVFLGAMLLLAVLFNNFIRRKVTGER"
     gene            1222..>1820
                     /locus_tag="VHN20_05260"
     CDS             1222..>1820
                     /locus_tag="VHN20_05260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018482321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX2725208.1"
                     /translation="MADAALIDVRNLVKHFGSVIALAGVSLTVRRGEVMCLLGDNGAG
                     KSTLIKTLSGVHRPTGGEFFVDGAPIAFRSPRDALDAGIATVYQDLAMIPLMSVTRNF
                     FMGREPVRGVWPFRNVDFTHCDRVTREEMHRIGIDVRDPHQAVGTLSGGERQCVAIAR
                     AVYFGAKVLILDEPTSALGVAQTSMVLKYIHQVRQKGLGV"
BASE COUNT          226 a          673 c          596 g          325 t
ORIGIN      
        1 atcgccttgg ggtaatcttg gcgcaataac cggtccccgg cgcgtccggg ggccgcttcg
       61 tcgcgacgag ggaggcggcg atggcagaga tgagccaggg agccgtggag tggaagcggg
      121 cggcagcgct cgccggtccc gacgagcgcc tcaggaagac gtcgctcgcc acccgcgcca
      181 tgcgccggcc cgagctcggc gcggcggccg gcctcgtcct cgtcaccatc ttcttcctgt
      241 ccaccgccga cgcctcgatg ttcacgctcg cgggcatcat gaacgtgctc gcgccggcct
      301 cgcagctcgg catcctggcc gtcgccgcgg cgctgctgat gatcggcggc gagttcgacc
      361 tgtcgatcgg ctcgatggtc gccttcgcgg gcctgatctt cggcgcgctc ctcgtcctgt
      421 ccggcctgcc gctgctcgcc gccatcgcgc tcaccttcgt gctcgcggcg tttttgggcg
      481 gcgtcaacgg gcagatcgtc atccgcacgc ggctgccgtc cttcatcgtc acgctcgcct
      541 tcctgttcat cctgcgcggc ctgtcgctcg tcgggctcaa atggacgacc ggcggctcga
      601 cgcagctgcg cggcatcggc gagcgcgccg gggagggcgt cgtgcgcgag atcttttccg
      661 gcgtcgcctt cgagggcctg ttcgcgtggc tcgccgcgca cgacgtcatc gccaaattcc
      721 cgaacggcgc gccgaccgtg accggcgtgc ccgtctcgat cctgtggttc gtcggcttcg
      781 ccgcgctcgc cacctgggtc ctgctgcgca cgcgcatcgg caactggatc ttcgccgccg
      841 gcggcgacgc caacgcggcg cgcaattccg gcgtgccggt cgaccgcgtc aagaccggcc
      901 tcttcatgct gaccgcctgc gcggcgacgc tggtcgccgt gctgaccgtg ctcgacgcgg
      961 gctcgaccga tgcgcgccgg ggattccaga aggagttcga ggcgatcatc gccgccgtca
     1021 tcggcggctg cctcctcacc ggcggctacg gctcggccat cggcgccttc ttcggcgccg
     1081 tcatcttcgg catggtgtcg atcggcctca cctacacgcg cttcgactcc gactggttcc
     1141 aggtcttcct cggcgccatg ctgctgctcg cggtgctgtt caacaacttc atccgccgaa
     1201 aagtcaccgg ggagcgctga catggccgac gcggccctca tcgacgtccg caacctcgtc
     1261 aagcatttcg gctcggtgat cgcgctcgcc ggcgtctcgc tcacggtccg gcgcggcgag
     1321 gtcatgtgcc tcctcggcga caacggcgcc ggcaagtcga ccctgatcaa gacgctgtcc
     1381 ggcgtgcatc gcccgaccgg cggcgagttc ttcgtcgacg gcgcgccgat cgccttccgc
     1441 tcgccgcgcg acgcgctcga tgccggcatc gccacggtct accaggacct cgccatgatc
     1501 ccgctgatgt cggtgacccg caacttcttc atggggcgcg agccggtgcg cggcgtctgg
     1561 cccttccgca atgtcgattt tacgcattgc gaccgcgtca cccgcgagga gatgcaccgc
     1621 atcggcatcg acgtgcgcga cccgcaccag gcggtcggga cgctgtcggg cggcgagcgc
     1681 cagtgcgtcg ccatcgcccg cgccgtctat ttcggcgcca aggtgctgat cctcgacgag
     1741 ccgacctcgg ccctcggcgt ggcgcagacc tcgatggtct taaaatacat ccaccaggtc
     1801 cgccagaaag ggctcggcgt
//
LOCUS       DATAIQ010000308         1837 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_384869, whole genome shotgun sequence.
ACCESSION   DATAIQ010000308 DATAIQ010000000
VERSION     DATAIQ010000308.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1837)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1837)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1837
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_384869"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..351)
                     /locus_tag="VHN20_05265"
     CDS             complement(<1..351)
                     /locus_tag="VHN20_05265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_255296106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HEX2725209.1"
                     /translation="MHDTLPLLDAIPFPALRRSRLTTLQVNLGYRCNQACFHCHVNAG
                     PTRTEAMGGEMIDLVVDVLERQRIGTLDITGGAPELHPEFRRLASAARDLGAKVMDRC
                     NLTILLEPGQEDLAA"
     gene            complement(426..1259)
                     /locus_tag="VHN20_05270"
     CDS             complement(426..1259)
                     /locus_tag="VHN20_05270"
                     /inference="COORDINATES: protein motif:HMM:NF013315.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HEX2725210.1"
                     /translation="MSGVSLEQRRRRYAAEITRHGGIYHERVEEAFATTPRENFLTPP
                     PWMIFAPGGLFNDETSDPVELYQDVLVVLDRSRGINNGQPSLHAAWMAALDPQPGETV
                     LHIGAGTGYYTAILAQLVTPGGRVHAYEIEEDLAEVARVNLAAFEGVTVHAASGVGTA
                     LPDGDVVYVNASASAPDIAWLEALKPSGRLIFPWQAVRQRGGIALQVTRTTHGYRAAA
                     IMEVAFIPCVGAMSDPASGAPARTRDVMETRSIWLSRERPPDDSAIVVYDQVWLSSQA
                     I"
     gene            complement(1330..>1837)
                     /locus_tag="VHN20_05275"
     CDS             complement(1330..>1837)
                     /locus_tag="VHN20_05275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018265333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HEX2725211.1"
                     /translation="IIGPAEGRTRWLGPGMTSEILCTGPAWRTPEIGDASVALIVTSP
                     PFLDVVDYRQDNWLRCWFAGIDATAVAIDQHKTVPEWERFVRRCLAEFCRVVRPGGHV
                     AFEVGEVRGGKVLLERNVVAAAQGLPLTLLGVMVNDQAFTKTANCWGVSNNRRGTNTN
                     RIVVLRRD"
BASE COUNT          293 a          616 c          647 g          281 t
ORIGIN      
        1 cgccgccaga tcctcctgcc ccggctcgag caggatggtg aggttgcagc ggtccatcac
       61 cttggcgccg aggtcgcgcg cggcgctcgc gagccggcgg aattccgggt gcagctcggg
      121 cgcgccgccg gtgatgtcga gcgtgccgat gcgttgccgc tcgagcacgt cgacgacgag
      181 gtcgatcatc tcgccgccca tcgcctcggt ccgcgtcggc ccggcattca catggcaatg
      241 gaagcaggcc tggttgcagc gatagccgag attgacctgc agggtcgtga gccgcgaacg
      301 gcggagggcg ggaaacggaa tggcgtccag cagaggcagg gtgtcgtgca tgcaaaacct
      361 ttgcgcggct tttacggcct gagggcggca ggcaaagtca cgttcgcgtc agccgggtca
      421 accgctcaga tcgcctgcga cgacagccag acctggtcgt agacgacgat ggcgctgtcg
      481 tccggcgggc gctcccgcga gagccagatc gagcgcgtct ccatcacgtc gcgggtgcgg
      541 gccggcgcgc cggaggccgg gtccgacatc gccccgacgc acgggatgaa ggcgacctcc
      601 atgatcgcgg cggcgcgata accgtgcgtg gtgcgcgtga cctggagggc gatgccgccg
      661 cgctgcctga ccgcctgcca ggggaagatc aggcgcccgc tgggcttgag ggcttcgagc
      721 caggcgatgt cgggcgccga cgcgctggcg ttgacgtaga caacgtcgcc gtccggcaag
      781 gccgtgccga cgcctgacgc ggcgtggacg gtcactccct caaaggcggc gagattgacc
      841 cgcgcgacct cggccaggtc ctcctcgatc tcgtaggcgt gcacgcgccc gccgggcgtc
      901 acgagttgcg caagaatggc cgtgtaatag cccgtgccgg cgccgatatg cagcacggtc
      961 tcgcccggct gcggatcgag tgcggccatc caggcagcgt gcaggctggg ctggccgttg
     1021 ttgatgccgc gcgagcgatc gaggaccacc agcacgtcct ggtagagctc gaccgggtcg
     1081 ctggtttcgt cgttgaacag gccgccgggc gcgaagatca tccatggcgg cggcgtcagg
     1141 aagttttcgc ggggcgtcgt ggcaaaggcc tcctcgacgc gctcgtggta gatgccgccg
     1201 tggcgcgtga tctcggccgc gtagcggcgc cgccgctgct cgagcgacac gccggacatc
     1261 gaaccctgcc acctgcgaat cggccaccaa ggcatcgcgc acctcgcgaa ggctgctgcc
     1321 gcatggcgct cagtcgcggc gcagcaccac gatgcggttg gtgttcgtgc cgcgccggtt
     1381 gttgctcacg ccccagcaat tggccgtctt cgtgaacgcc tgatcgttga ccatgacgcc
     1441 gagcagcgtc aacggcaaac cctgtgctgc ggcaacgacg ttgcgttcga gcaggacctt
     1501 gccgccgcgc acctcgccga cctcgaaggc gacatggccg ccgggacgaa ccacgcggca
     1561 aaattccgcg aggcagcggc gtacgaagcg ctcccattcg gggaccgttt tgtgctgatc
     1621 gatcgccacg gcggtcgcat cgattcccgc gaaccagcag cgcagccagt tgtcctgacg
     1681 atagtcgacg acgtcgagaa acggcggcga cgtcacgatc aacgccaccg aggcgtcgcc
     1741 gatctccggc gtgcgccacg ccgggccggt gcacaatatc tccgatgtca ttccggggcc
     1801 gagccaacgg gtccggcctt cggccggccc gatgata
//
LOCUS       DATAIQ010000309         2176 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_384884, whole genome shotgun sequence.
ACCESSION   DATAIQ010000309 DATAIQ010000000
VERSION     DATAIQ010000309.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2176)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2176)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2176
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_384884"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..159)
                     /locus_tag="VHN20_05280"
     CDS             complement(<1..159)
                     /locus_tag="VHN20_05280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008034214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX2725212.1"
                     /translation="MSSTLFLVQVLNGLQFGLILFLIAAGLTLVFGVMNFINLAHGVQ
                     YMVGAYLAA"
     gene            complement(304..1479)
                     /locus_tag="VHN20_05285"
     CDS             complement(304..1479)
                     /locus_tag="VHN20_05285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015684740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX2725213.1"
                     /translation="MKQLCTSLGAAALLGTLAAPALAQEKVRIGVVTTLTGPAAVLGQ
                     QLRDGFNLAVKELGGKLGGREAEIFIADDELKPDVAVTKVKGLIERDKVDVVVGPVFS
                     NVLGAMAKPVTDAQVILISPNAGPSSLAGKGCHGLFFATSYQNDQNHEVLGKVAQNRG
                     YKRVYLLAPNYQAGKDALAGFKRHFKGEVVEESYVPLNTLDFQSELAKIASMRPDALF
                     TFMPGGPGVNLVKQYKQAGLAERIPFLSAFTVDESTLPAQQDSAVGMFGGSNWAPNLD
                     TPENKKFVAAYEKAYNSVPGSYAMHAYDTAVLLDSALKSVNGPLADRNALRAALRKAD
                     FKSLRGDFKFGANGFPIQDFYLVKVAKRADGKFQTEIVEKVFDDYADVYAKECPLNN"
     gene            1668..>2176
                     /locus_tag="VHN20_05290"
     CDS             1668..>2176
                     /locus_tag="VHN20_05290"
                     /inference="COORDINATES: protein motif:HMM:NF042769.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX2725214.1"
                     /translation="MTRTPAEAGAATAAPAGARCQTREGVRYVTRGDQALSGTLYSPV
                     GPGPYPAIIALHGGGWRNAGADVFRHLGPWLAERGYVVFAPTYRLAKAGQGSFPHAVH
                     DVRAAVQFVKGRADEWRIAADRIALLGESAGGHLATLVALAGDKPIFADGNASEPFAE
                     VPTSVKAAIP"
BASE COUNT          363 a          705 c          734 g          374 t
ORIGIN      
        1 ggccgccaga tacgcgccca ccatgtattg cacgccgtgg gcgaggttga tgaagttcat
       61 cacgccgaac acgagcgtca gccctgccgc gatcaggaac aggatcaggc cgaactgcag
      121 gccgttcagg acctggacga gaaaaagcgt ggagctcatc gcaacgggac aatacggagg
      181 gcgcataaac cctcccccca atggggagag ggcagggtga ggggggcgcg ccctttccgc
      241 aaaaggtgat ctccctcacc cggtccgctt cgcggactcg acctctcccc ctccggggag
      301 aggtcaatta ttcagggggc attccttggc gtagacgtcg gcgtagtcgt caaagacctt
      361 ttcgacgatc tccgtctgga acttgccgtc ggcgcgcttg gcgaccttga ccaggtagaa
      421 gtcctggatc gggaagccgt ttgcgccgaa tttgaagtcg ccgcgcagcg acttgaagtc
      481 ggccttcctg agcgccgcgc gcaaggcgtt gcggtcggcg agcggaccgt tgacgctctt
      541 cagagcgctg tcgagcagca cggcggtgtc gtaggcatgc atggcatacg agccgggcac
      601 ggagttgtag gctttctcgt aagcagcgac gaatttcttg ttctcgggcg tgtcgaggtt
      661 cggcgcccag ttggagccgc cgaacatccc gacggccgag tcctgctggg ccggcagcgt
      721 cgattcgtcg acggtgaagg cagacaggaa cgggatgcgc tcagcgaggc ccgcctgctt
      781 gtattgcttg acgagattca cgcccgggcc gccgggcatg aacgtgaaca gcgcatccgg
      841 ccgcatggag gcgatcttgg cgagctcgga ctggaagtcg agcgtgttga gcggcacata
      901 cgattcctcg acgacctcgc ccttgaaatg ccgcttgaag ccggcgagcg cgtccttgcc
      961 ggcctggtag ttgggagcga gcaggtaaac gcgcttgtag ccgcggttct gcgccacctt
     1021 gcccaggacc tcgtggttct ggtcgttctg gtaagaggtc gcgaagaaca ggccatggca
     1081 gcctttgccc gcgaggctcg aaggaccggc attggggctg atcaggatca cctgcgcgtc
     1141 cgtcaccggc ttggccatcg cccccagcac gttcgagaag accgggccga ccacgacgtc
     1201 gaccttgtcg cgctcgatca ggcccttcac cttggtcacg gccacgtccg gcttgagctc
     1261 atcgtcggca atgaagattt cagcctcgcg gccgccgagc ttgccgccaa gttccttgac
     1321 ggcgaggttg aagccgtcgc gcagctgctg gccgagaacg gccgccggcc cggtcagggt
     1381 ggtgacgacg ccgatcctga ccttctcctg cgccagagcg ggcgccgcga gggtgccgag
     1441 aagcgcggcg gcgccaaggc ttgtgcacag ctgtttcatg gctcttgccc ctttggaatc
     1501 cgagatttgg tgcagttcag tcatcccggg aacgtgaagt caacgggtcg gcctgcctga
     1561 ccgccatttc ggcgcctact ttcggcccgc gcccgggggc gacgtcgcga tagatgacaa
     1621 tgcgcccggt gtgctagcca gcgccatccc atttcaggac ggactacgtg acgagaactc
     1681 ctgctgaagc cggcgcggcg accgccgcac ccgccggcgc acgctgccag actcgcgagg
     1741 gcgtccgcta cgtgacccgt ggcgaccagg ccctgagcgg cacgctctat tcgcccgtcg
     1801 gcccgggacc gtacccggcg atcatcgcgc tgcacggggg aggctggcgc aacgccggtg
     1861 ccgacgtgtt ccggcacctc gggccgtggc tggcggagcg cggctacgtc gtgttcgccc
     1921 cgacctaccg gctcgccaag gcgggacaag ggtcgttccc gcacgccgtg cacgacgttc
     1981 gcgccgcggt gcaattcgtc aaaggccggg ccgacgagtg gcggatcgca gccgaccgga
     2041 tcgccctcct gggcgagtcg gccggcggtc atctcgcgac cctcgtcgcg ctcgccggcg
     2101 acaagccgat ctttgctgat ggaaatgcga gcgagccctt cgccgaggtg ccgaccagcg
     2161 tcaaggcggc gatccc
//
LOCUS       DATAIQ010000310         1844 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_330152, whole genome shotgun sequence.
ACCESSION   DATAIQ010000310 DATAIQ010000000
VERSION     DATAIQ010000310.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1844)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1844)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1844
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_330152"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            162..545
                     /locus_tag="VHN20_05295"
     CDS             162..545
                     /locus_tag="VHN20_05295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725215.1"
                     /translation="MASRKSKRSSTNYSNTAKATGAAALIGALAGLFWLKRSGKTIGE
                     VADDVSTRVKDGIADATQRAKDSGWIKDGVDEKSQAEIAEEALTLKETGAKSKGARGP
                     LAQQDIKAGIATSNQEAKAGAKALS"
     gene            complement(739..>1844)
                     /locus_tag="VHN20_05300"
     CDS             complement(739..>1844)
                     /locus_tag="VHN20_05300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014283297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008241 - peptidyl-dipeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="M2 family metallopeptidase"
                     /protein_id="HEX2725216.1"
                     /translation="HTYVRGKLNAKYGDSIQPKSGAIRADLLGNMWAQEWGNIYPLVA
                     PPGSGDIGYDLTDLIVKKGWDAKAMTKVGEDFFSSLGFAPLPKTFWERSMFVKPADRE
                     VVCHASAWDVDNVDDLRIKMCIKPNADDFITIHHELGHNYYQRAYNKQPFLYLNGAND
                     GFHEAIGDMIALSITPEYLVQIGVLDRAQVPSADKDLGLLLRQAMDKVAFLPFGLLVD
                     RWRWGVFDGSIQPAGYNEAWTKLRREYQGITPPTARPADAFDPGAKYHIPGNTPYTRY
                     FLARILQFQFYKAACDQAGWKGPLHRCSFYGNKEVGKRLNAMLEMGASKPWPDALEAF
                     TGTRQMSGKAMVEYFAPLKKWLDQQNKGKPSGW"
BASE COUNT          318 a          585 c          630 g          311 t
ORIGIN      
        1 cgagcaggtc aacgtcgagg cgcctggcgc gtacgagtta tccggcgcgg agaccatgct
       61 gggccagttg taacggttcg tcgcgcggcg ggccgtggca cctagccgcg gcccgagcgt
      121 tgctcctgca cccaatcccc acggtgtaag gagtaacaaa catggccagc aggaagagca
      181 aacgcagcag cacgaactat tccaacacgg cgaaggcgac cggcgctgcc gcactgatcg
      241 gcgcgctcgc cgggctgttc tggctgaagc gcagcggcaa gacgatcggc gaggtcgccg
      301 acgacgtttc gacccgggtc aaggacggca tcgccgacgc tacccagcgc gccaaggaca
      361 gcggctggat caaggacggg gtcgacgaga agtcgcaggc cgagatcgcc gaggaggcgc
      421 tgaccctgaa ggagaccggc gcgaagtcga agggcgcgcg cggcccgctc gcccagcagg
      481 acatcaaggc cgggatcgcg accagcaacc aggaagccaa ggcaggggcg aaagcgctca
      541 gctagaccac gatgtcaatg agcttggagg gggcgcccgg cgacgggcgc cccttttctt
      601 tcgcagcctg cgccgtcacg aactgaattc gtgacgtcga tccgatcggc tgcgccgccg
      661 gtcggccggg cttccgcatc tctcagccag cggaaatttc gctttccgcg aagtcgccgc
      721 tgccatcggt gcttcagcct accacccgct cggcttgccc ttgttctgct ggtcgagcca
      781 cttcttcaac ggcgcgaaat attcgaccat cgccttgccc gacatctgcc gcgtgccggt
      841 gaaggcctcg agcgcgtcgg gccaaggctt cgaggcgccc atctcgagca tcgcgttgag
      901 gcgcttgccg acttccttgt tgccgtagaa gctgcagcga tggagcgggc ccttccagcc
      961 ggcctggtcg cacgccgcct tgtagaactg gaactggagg atccgcgcca ggaagtagcg
     1021 agtgtaaggc gtgttgccgg ggatatggta cttggcgccc gggtcgaacg cgtcggctgg
     1081 ccgcgccgtg ggcggcgtga tgccctggta ttcgcggcgc agcttcgtcc acgcctcgtt
     1141 gtagccggcc ggctggatcg agccgtcgaa cacgccccac cgccagcggt cgacgagcag
     1201 gccgaacggc aggaacgcga ccttgtccat ggcctggcgg agcagcagtc cgaggtcctt
     1261 gtccgcgctc ggcacctggg cgcggtcgag caccccgatc tggaccagat attcgggcgt
     1321 gatcgacagg gcgatcatgt cgccgatcgc ctcgtggaag ccgtcgttgg cgccgttcag
     1381 atagaggaac ggctgcttgt tgtaggcgcg ctggtagtaa ttgtggccga gctcatggtg
     1441 gatggtgatg aagtcgtcgg cgttgggctt gatgcacatc ttgatgcgca gatcgtcgac
     1501 attgtcgacg tcccacgccg acgcgtggca gaccacctcg cggtcggccg gcttgacgaa
     1561 catcgagcgc tcccagaacg tcttgggcag cggcgcgaag cccagcgacg agaagaagtc
     1621 ctcgccgacc ttggtcatcg ccttggcgtc ccagcccttc ttcacgatga ggtcggtgag
     1681 gtcgtagccg atgtcgcccg agcccggcgg cgcgaccagc gggtagatgt tgccccattc
     1741 ctgggcccac atgttgccga gcaaatcggc gcggatcgct ccggacttcg gctggatgga
     1801 atcgccgtac ttggcgttca gcttgccgcg gacgtaggtg tgga
//
LOCUS       DATAIQ010000311         1661 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_15987, whole genome shotgun sequence.
ACCESSION   DATAIQ010000311 DATAIQ010000000
VERSION     DATAIQ010000311.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1661)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1661)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1661
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15987"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..779)
                     /locus_tag="VHN20_05305"
     CDS             complement(<1..779)
                     /locus_tag="VHN20_05305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725217.1"
                     /translation="MPHDAPAQAHWHEPKAGENAGHGKFKRQPLPYDRFMEAEGVPVY
                     RGIGVRRVQDLPLAPWPRLGGRGSYIQLYGTEGLWGCYVVEVPAGGALNVERHLYEKY
                     VLVIEGRGSTEVWQEGQARPQAFEWQPWTLFSIPLNAYHRIVNATSSPALLLCGTTAP
                     NMINLVDSLEFVFNCPFNFTNRYAGDDNFFKPRDDIEPDPIRGLAMRRTNLIPDIATC
                     ELPLDNRRSPGYRRIEPNMAGSRFYVWLAQHETGRYSKAHK"
     gene            complement(829..>1661)
                     /locus_tag="VHN20_05310"
     CDS             complement(829..>1661)
                     /locus_tag="VHN20_05310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725218.1"
                     /translation="STVVNMPAGTGIVATNHVYNIADKDGTAFGLFNRYTVMHPILGT
                     EQAKYKSENFNWLGTTASYTDNAYLFVIRGQLPQTDIAGLRTANPPLNVGNIGAAPIE
                     VIKEALGLNLKIIYGYTGDNLDIAFENGEVDGHTIGYQTMVSRKPHWIEKNIARPMIQ
                     FGRVDRHPALANVPTARELAHTEEQRALIAFAEAPLMIGYPFALPPGVPADRVAIMQK
                     AFQETMDDPEFQAEMTKASLEFTPRDGKTVAALVAELAKAPEPVIKKYKSLVGDRHGG
                     "
BASE COUNT          266 a          505 c          552 g          338 t
ORIGIN      
        1 tgcttgtgcg ccttcgagta tcgcccggtc tcgtgctggg ccagccacac gtaaaagcgg
       61 ctgccggcca tgttcggctc tatgcgccga tagcccgggg agcgccggtt atcgagtggc
      121 agctcgcatg tggcgatatc cggaatgagg ttcgtgcgcc gcatggcgag gccgcggatc
      181 gggtcgggct cgatgtcgtc gcgcggcttg aagaagttgt cgtcgccggc gtagcggttg
      241 gtgaaattga aggggcagtt gaagacgaat tcgaggctgt ccaccagatt gatcatgttg
      301 ggggcggtcg tgccgcacag gagcagcgcc ggcgagctgg tggcattgac gatgcggtgg
      361 tacgcgttca gcggaatcga gaacagggtc cacggctgcc actcgaaggc ttgcggcctg
      421 gcctgccctt cctgccagac ttccgtgctg ccccggccct cgatgacgag cacgtatttt
      481 tcatacaggt ggcgctcgac gttcagcgcg ccgccggccg ggacctcgac gacgtagcat
      541 ccccagagac cttcggtgcc gtagagctgg atgtagctcc cgcgaccgcc caggcgcggc
      601 cagggcgcaa gcggcaggtc ctgcacgcgg cggacgccga tgccgcgata gacgggcacg
      661 ccctccgcct ccatgaagcg gtcatagggc agcggctggc gcttgaactt gccgtggccg
      721 gcattctcgc ccgctttcgg ctcatgccaa tgagcctgcg ccggtgcgtc atgaggcatc
      781 gctcagggct cctgaaccgc agaaacggga ttgtcgcgca gcggcccctc agccgccatg
      841 acgatcgccg accagacttt tatatttctt gatcaccggc tccggcgcct tcgctaattc
      901 ggcaaccagg gcggcaaccg tcttgccgtc cctcggtgtg aactcgaggc tcgccttcgt
      961 catctcggcc tggaattccg ggtcgtccat cgtctcctga aatgcctttt gcatgatggc
     1021 gacccggtcg gcagggacgc ccggcgggag tgcgaaagga tagccgatca tcagaggtgc
     1081 ctcggcgaac gcgatgaggg cgcgttgctc ctccgtgtgg gcgagctcgc gggccgtggg
     1141 cacattggca agggcgggat gccggtccac gcgcccgaac tgaatcatcg gacgtgcgat
     1201 gttcttctcg atccagtggg gctttcgcga caccatcgtc tggtatccga tcgtgtggcc
     1261 atctacctcg ccgttttcga acgcgatgtc gaggttgtcg cccgtatagc cgtagatgat
     1321 cttcaaattc agtccgagcg cttccttgat gacctcgatg ggagcggcgc cgatattccc
     1381 cacattcagc ggcgggttgg cggtacgcag gcccgcgatg tcggtctgcg gaagctgacc
     1441 acggatcacg aacagatagg cgttatccgt gtaactggcc gtcgtgccga gccagttgaa
     1501 gttttcggac ttgtacttgg cctgctccgt tccgaggatc gggtgcatga ccgtgtagcg
     1561 gttgaacaac ccgaaggccg tgccgtcctt gtcggcgatg ttgtagacgt ggttcgtcgc
     1621 cacgatgcct gtcccggccg gcatgttcac cacggtgctg g
//
LOCUS       DATAIQ010000312         2051 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_16161, whole genome shotgun sequence.
ACCESSION   DATAIQ010000312 DATAIQ010000000
VERSION     DATAIQ010000312.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2051)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2051)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2051
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_16161"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..888
                     /gene="glpD"
                     /locus_tag="VHN20_05315"
     CDS             <1..888
                     /gene="glpD"
                     /locus_tag="VHN20_05315"
                     /EC_number="1.1.5.3"
                     /inference="COORDINATES: protein motif:HMM:NF008899.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009331 - glycerol-3-phosphate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0004368 - glycerol-3-phosphate
                     dehydrogenase (quinone) activity [Evidence IEA];
                     GO_process: GO:0006072 - glycerol-3-phosphate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate dehydrogenase"
                     /protein_id="HEX2725219.1"
                     /translation="AAGPWVDQLLREGLHMPGPRNLRLVKGSHVVVPRLYPGEHAYIL
                     QNPDRRVVFVIPFEQRFTLIGTTDIPFDGDPAQVTISADETAYLCNAASRFLAIPVRP
                     EEVVWTYAGVRPLYDDASADPSTITRDYVFDMVAGDGRPPVLSVFGGKITTYRKLAEH
                     ALARLGPMLPTNKGPWTSDAPLPGGDLPGGDCEAFATRLQKGPPWLPREQARRLARSY
                     GTRVARLLEGATRLDDLGQDFGGGLTEREVAYLVEHEWARTAEDILWRRTKLGLTGDA
                     ALRARLEAYLAGRVNAGVR"
     gene            complement(914..>2051)
                     /locus_tag="VHN20_05320"
     CDS             complement(914..>2051)
                     /locus_tag="VHN20_05320"
                     /EC_number="2.7.7.65"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0052621 - diguanylate cyclase activity
                     [Evidence IEA];
                     GO_function: GO:0071111 - cyclic-guanylate-specific
                     phosphodiesterase activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="bifunctional diguanylate
                     cyclase/phosphodiesterase"
                     /protein_id="HEX2725220.1"
                     /translation="LGHSVGDGLLKAVSDRIAAQLGQRDTVVRLGGDEFAVLQVGAEQ
                     PRSATRLAQQLVTSMRDAFVLNGHRLHVGVSIGIALAPTDGLDPDRLLKCADIALYRA
                     KGEGRDTFCFFEPAMDSEMQARRATELAIREALARNEFTLFYQPYFDIARGEVIGFEA
                     LLRWKHPTRGIVSPGEFIAVAEETGLIVPLGEWVIQEACREAAQLPGTSRVAVNVSAA
                     QFRSPNFVQLVVTTLAETGLSPARLELEITETLLMHSNDSVLEALHLLRGLGIRIALD
                     DFGTGYSSLGYVRSFPFDKIKIDRSFVNELGKSPDCAAIVRAIVSLGVGLGIPTTAEG
                     VETAAQLDFVRACGCAEAQGYLLGVPKPLQEALRSVQQTRSSAA"
BASE COUNT          333 a          686 c          705 g          327 t
ORIGIN      
        1 gcggcggggc cgtgggtcga tcagctgctg cgtgaagggc tgcacatgcc ggggccgcgc
       61 aatctgcgcc tcgtcaaggg cagccacgtc gtggtgccgc ggctctatcc gggcgagcac
      121 gcctacatcc tgcagaatcc cgatcgtcgc gtcgtgttcg tgattccgtt cgagcagcgc
      181 ttcacgctga tcggcacgac cgacatcccg ttcgacggcg acccggcgca ggtcaccatc
      241 agcgccgacg agaccgccta tctctgcaac gccgccagcc gcttccttgc gatcccggtc
      301 cgcccggagg aggtcgtgtg gacctatgcg ggcgtgcggc cgctttacga cgacgcctcc
      361 gcagacccat ccacgatcac gcgcgactac gtcttcgaca tggttgcggg cgacggccgc
      421 ccgcccgtcc tttcggtatt cggcggcaag atcacgacct accgaaaact tgccgagcac
      481 gcgcttgcca ggctcggccc gatgctgccg acgaacaaag gcccatggac gagcgacgca
      541 ccgctccccg gaggtgacct gccgggcggc gattgcgagg ccttcgccac ccgcttgcag
      601 aaagggcccc cgtggctgcc gcgcgagcag gctcgccgtc tcgcccgctc ttatggcacg
      661 cgcgtcgcgc gcctgctcga gggtgcaacg cgcctcgacg atctcggtca ggatttcggc
      721 ggcggcctca cggaacgtga ggtcgcgtat ctcgtcgagc acgaatgggc gcgcacagcc
      781 gaggacatcc tgtggcggcg caccaagctc gggctgacgg gtgatgcggc cctcagggcg
      841 aggctggagg cctacctagc cggcagggtg aatgcgggcg tgcggtgacg tcctctccgt
      901 gcggcgaggg gaactaggcc gcgctggagc gcgtctgctg cacgctgcgg agcgcctcct
      961 gcagcggctt cgggacgccg agcagatagc cttgcgcttc ggcgcagccg caggcgcgaa
     1021 cgaaatcgag ctgggcggcc gtctcgacgc cctcggcagt ggtcgggatc cctaggccga
     1081 cgcccaggct gacgatggca cgcacgatcg ccgcgcagtc ggggctcttg ccgagctcgt
     1141 tgacgaacga gcggtcgatc ttgatcttgt cgaacgggaa gctgcgcacg tagcccaggc
     1201 ttgaatagcc cgtgccgaaa tcgtcgagcg cgatacggat gcccaggccc cggagcagat
     1261 gcagcgcctc gagcaccgaa tcgttgctgt gcatgaggag cgtctcggtg atctccagtt
     1321 cgagccgggc cggagagagg ccggtttctg ccagcgtggt caccaccaac tgcacgaagt
     1381 tggggctgcg gaattgtgcg gcggaaacgt tgaccgcaac gcggctcgtg ccgggcagct
     1441 gcgccgcttc gcggcaggcc tcctggatga cccactcgcc gagagggacg atgaggccag
     1501 tctcctccgc gacggcgatg aactcgcccg gagacacgat gcctctggtc ggatgcttcc
     1561 agcgcagcaa cgcttcgaag ccgatgacct cgccccgggc aatatcgaag tagggctggt
     1621 agaacagcgt gaactcgttc ctggcgagcg cttcgcgaat ggcgagttcg gtggcgcgcc
     1681 gcgcctgcat ctccgaatcc atcgccggct cgaagaagca gaacgtgtcg cgcccttcgc
     1741 ccttggcacg ataaagggcg atgtccgcgc atttgagcag cctgtcagga tcgaggccgt
     1801 cggtcggcgc gagtgcgatg ccgatgctga cgccgacatg gaggcggtgt ccgttcagca
     1861 cgaaggcgtc gcgcatcgac gtcacgagct gttgcgccag gcgcgtggcg ctgcgcggct
     1921 gctcggcccc gacctgcagc acggcaaatt cgtcgccgcc gagacggacg accgtgtcgc
     1981 gctgtccgag ctgcgccgcg atgcgatccg aaaccgcttt gagtagaccg tcgccgacgg
     2041 agtggccaag c
//
LOCUS       DATAIQ010000313         5566 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_293443, whole genome shotgun sequence.
ACCESSION   DATAIQ010000313 DATAIQ010000000
VERSION     DATAIQ010000313.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 5566)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5566)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5566
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_293443"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(7..351)
                     /gene="fliN"
                     /locus_tag="VHN20_05325"
     CDS             complement(7..351)
                     /gene="fliN"
                     /locus_tag="VHN20_05325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017484076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009288 - bacterial-type flagellum
                     [Evidence IEA];
                     GO_function: GO:0003774 - cytoskeletal motor activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliN"
                     /protein_id="HEX2725221.1"
                     /translation="MATDSELHLPQLDQNDVQFQAGGSITDVAVSTKNASDLEQVFDV
                     PVMVSAVLGNSRMPIGDLLKLAPGALLELDRKVGEAIDILVNNRLVARGEVVLVDERL
                     GVTMTEIIKSDH"
     gene            complement(591..1187)
                     /locus_tag="VHN20_05330"
     CDS             complement(591..1187)
                     /locus_tag="VHN20_05330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019904647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly protein FliH"
                     /protein_id="HEX2725222.1"
                     /translation="MQTTITPNRFLFERDFRNPDGNAKNAAALQEAEERGVQRGRAEG
                     RAQAQAEAERNLANAVQRLADAAISLLAGVDAHNARLEEEAVAFGTTLGRKLAGAALA
                     GRPLETIAATARSTFQHLHGVPHLVVRVNEALVEQVDGLVHRIARERGYEGRLVVMGE
                     PGIAPGDARIEWADGGVIRDQNQIEDAVTRALEGVVFY"
     gene            complement(1189..2217)
                     /gene="fliG"
                     /locus_tag="VHN20_05335"
     CDS             complement(1189..2217)
                     /gene="fliG"
                     /locus_tag="VHN20_05335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015857386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009433 - bacterial-type flagellum basal
                     body, C ring [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliG"
                     /protein_id="HEX2725223.1"
                     /translation="MAGNQVEIKNFSELSGPQRAAVLLLMLGEKHGGPIWSMLEEDEV
                     KRVSYAMAQLGSIEARTVEELVVDFVSRLSSTGAVTGSIDRTEELLAKIFPADEVASI
                     ISDIKGASGRRMWQRLSHIDADILGAYLRNEYPQTVAVILSRISPDHTARVLSILPDD
                     FAVDVMNRMLKMDTVQKEALEHIEETLRNEFVTTISQATRRDANELMAEVFNAFDRQT
                     EARFFSALDSVNRDAAKKIRELMFTFEDLTKLDPGSVQTLMRQMDRDTLGRALKGAPE
                     GVREFFFSNMSSRASKNLQDEMAAMGPIRLKDVDDAQSKMVNMAKELADKGEIMISKN
                     RAEEELVY"
     gene            complement(2240..3838)
                     /gene="fliF"
                     /locus_tag="VHN20_05340"
     CDS             complement(2240..3838)
                     /gene="fliF"
                     /locus_tag="VHN20_05340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012334838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009431 - bacterial-type flagellum basal
                     body, MS ring [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal-body MS-ring/collar protein
                     FliF"
                     /protein_id="HEX2725224.1"
                     /translation="MNGAIEFLTRLGLARLAMMGVVTLALVGFFAYVIVRVSQPAMGV
                     LFSDLSPQDAGAIVRDLDARNVRYETRGDGQTLLVPRSDLARIRMDLAGKGLPAGGGV
                     GYEIFDKGDAFSSTSFVQGINHLRALEGELSRTIRTIGRVQAARVHLVIPERRLFERD
                     RESPRASIVLKLRGELEPGQVRAVRHLVASAVEGLKPERVSIVDERGRLLADGAQSDG
                     SAAGLAADEKQATVERRLRTQVEEIVAGVVGAGRARVQVAAELDLNRVESRSETFDPE
                     SRVVRSTQTRAESQVAGNSEGAVSVGNELPGANAQSGAAPTRDASNKNEEVVNYEISR
                     TTRTEVLEGGRVRRLSVAVLLDGIYSRGANGEVAYQPRPQEELDRITALVRTAIGFDR
                     NRGDQVEVVNLRFAEAPTAVEIPSEPLLSSVFNPTKEDLYRLMELGVLALLTIIVLLM
                     VVRPMLKNVFGTSKGGRAVVAAIAGDNLALPAAQPASAAAQMIEIAKITGQMRADSVE
                     RIGEMVNANPQETVAVLRNWIHDR"
     gene            complement(4001..4276)
                     /locus_tag="VHN20_05345"
     CDS             complement(4001..4276)
                     /locus_tag="VHN20_05345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011156827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1153 domain-containing protein"
                     /protein_id="HEX2725225.1"
                     /translation="MTEPHRSRVKYVIGPDGSPLTIADLPPPSTRRWVIRRKAEVVAA
                     VRGGLLSLEEACRRYTLTVEEFLSWQQSIDQHGLAGLRTTRIQHYRQ"
     gene            complement(4470..5144)
                     /locus_tag="VHN20_05350"
     CDS             complement(4470..5144)
                     /locus_tag="VHN20_05350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012456274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook capping FlgD N-terminal
                     domain-containing protein"
                     /protein_id="HEX2725226.1"
                     /translation="MATIPTGVGAAATAATAGSSSTTRTTMAQNFDAFLLLLTTQLKN
                     QSPLDPLDTNQFTQQLVQFASVEQQLKSNDTLNSLLTSVRASANSTAGSFVGMEVSAD
                     GASSRLANGKATWVLNAARNAQAEILITDKKGNIVAAQTKALSAGAQNYEWDGRTMTG
                     TRAPDGDYTMTVTARDATGQGVSVKSEISGKVTSVDLSGEVPVLMIGSFRVPLPNVRS
                     LSRGAG"
     gene            complement(5171..>5566)
                     /locus_tag="VHN20_05355"
     CDS             complement(5171..>5566)
                     /locus_tag="VHN20_05355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011313929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-length control protein FliK"
                     /protein_id="HEX2725227.1"
                     /translation="ALKTLAGINRFEIRLDPGDLGRIDVSLEIDDKGEVKAHLTVDKV
                     ETLALLQRDARTLERAFEQAGLKSSDGGVNLSLRDQQQHQGQGRQQSGEGREAPRVAG
                     AETGREPREAAPPPPRRIWPGSTGVDVRI"
BASE COUNT          866 a         1829 c         1865 g         1006 t
ORIGIN      
        1 aatggatcag tggtcgctct tgatgatctc ggtcatggtg acgccgaggc gctcgtccac
       61 cagcacgacc tcgccccggg cgacgaggcg gttgttgacc aggatgtcga tcgcctcgcc
      121 gaccttgcgg tcgagctcga gaagcgcccc cggcgcgagc ttgagtagat cgccgatcgg
      181 catgcgcgaa ttgccgagca ccgccgagac catgaccggc acatcgaaga cctgctcgag
      241 atccgatgcg ttcttggtcg acacggcgac gtcggtgatc gagccgcccg cttgaaactg
      301 cacgtcgttc tggtcgagct ggggaaggtg aagttcggag tcggtcgcca tggtcgcctt
      361 tcaaattgcc cgtagtccgc ctcgcgcggg atcgcttcaa acaaatcgac gctggaacgc
      421 ttgtgacgcg ggccccgatg tcgggacgag cgcgctcggc gacgccgccg cggcttcgcc
      481 gattacgcgc cggagcggga tcgattcacg tcgaagcgat gccgctcggt actctttcgt
      541 tgtcgcatga tctttttcgg cgagcggtat ccacttcgcc ggatcatgct ctagtaaaac
      601 acgacgcctt cgagcgcccg cgtcacggcg tcctcgatct ggttctggtc gcggatgacg
      661 ccgccgtcgg cccattcgat gcgggcgtcg cccggcgcga tgccgggctc gcccatgacc
      721 accagccgcc cctcgtagcc gcgctcgcgc gcgatgcgat ggaccaggcc gtcgacctgt
      781 tcgaccagcg cctcgttgac gcgcaccacg agatgcggca cgccgtgcag atgctggaag
      841 gtggaccgcg ccgtcgccgc aatggtttcg agcggccgac ccgccaacgc cgcgccggca
      901 agcttgcgcc cgagtgtcgt cccgaaggcg accgcctctt cctcgaggcg ggcattatgg
      961 gcatcgacgc ccgcaagcag cgaaatggct gcgtcggcaa gacgctgcac ggcgttcgcc
     1021 agattcctct cggcttcggc ctgcgcctgc gcacggccct cggcgcggcc gcgctgcacg
     1081 ccgcgctcct cggcctcctg cagcgccgcc gcgttcttgg cgttgccgtc gggattgcgg
     1141 aagtcgcgct cgaacaggaa tcggttgggc gtgatcgtcg tctgcatgtc agtagacgag
     1201 ctcctcttcg gcgcggttct tcgagatcat gatctcgccc ttgtcggcga gctccttggc
     1261 catgttgacc atcttgctct gggcgtcgtc gacgtccttg aggcggatcg ggcccatggc
     1321 cgccatctcg tcctgcaggt tcttgctggc gcgcgacgac atgttggaga agaagaattc
     1381 cctgacccct tcgggtgcgc ccttgagggc gcggccaagg gtgtcgcggt ccatctggcg
     1441 catgagcgtc tgcacgctgc cggggtcgag cttggtgaga tcctcgaagg tgaacatgag
     1501 ctcgcgtatc ttcttggcgg cgtcgcggtt gacgctgtcg agagcgctga agaagcgcgc
     1561 ctcggtctgc cggtcgaagg cgttgaagac ctcggccatc agctcgttgg cgtcgcggcg
     1621 cgtggcctgc gagatggtcg tcacgaactc gttgcgcaaa gtctcctcga tatgctcgag
     1681 ggcctccttc tgcaccgtgt ccatcttgag catgcggttc atcacgtcga ccgcgaaatc
     1741 gtcgggcagg atcgagagga cccgggccgt gtggtcggga ctgatgcgcg acaggatgac
     1801 cgcgaccgtc tgcgggtatt cgttgcgcag ataggcgccc aggatatcgg catcgatatg
     1861 cgagaggcgc tgccacatgc ggcgcccgga cgcgcccttg atgtccgaga tgatcgacgc
     1921 gacttcgtcg gcgggaaaga tcttggcgag cagctcctcg gtgcggtcga tgctgcccgt
     1981 gactgcgccc gtcgaggaaa ggcgcgacac gaaatcgacg accagctcct cgaccgtcct
     2041 cgcctcgatc gagccgagct gggccatggc gtaggagacg cgcttgacct cgtcttcctc
     2101 cagcatggac cagatcgggc cgccgtgctt ctcgccgagc atcagcagca gcacggcagc
     2161 gcgctgcggt ccgctcagct cgctgaaatt cttgatctcg acctggttcc cggccatggc
     2221 tgctatctca cattctcact cagcggtcgt ggatccaatt gcgcaggacg gcaactgtct
     2281 cctgcggatt cgcattgacc atctcgccga tccgctcgac cgaatcggcg cgcatctgac
     2341 cggtgatctt agcgatctcg atcatctgcg cggcggcgct cgccggctgc gccgccggaa
     2401 gcgcgagatt gtcgccggcg atggctgcga cgacggcgcg gccgcctttg ctggttccga
     2461 acacgttctt cagcatcggc cgcaccacca tgagcagaac gatgatggtg agtagcgcga
     2521 gcacgccgag ctccatcagc cggtacagat cttccttggt cgggttgaac acgctcgaca
     2581 gaagcggctc gctgggaatc tcgacggcgg tcggagcttc cgcgaagcgc aggttgacca
     2641 cctcgacctg atcgccgcgg ttgcggtcga agccgatcgc ggtgcgcacg agcgcggtga
     2701 tacggtcgag ctcttcctgc gggcgcggct gataagcgac ctcgccgttg gcgccgcggc
     2761 tgtaaatgcc gtcgagaagc acggcgaccg acaggcgcct gacgcggccg ccttcgagaa
     2821 cctcggtgcg cgtcgtgcgc gagatctcgt aattgacgac ttcttcgttc ttgttggagg
     2881 cgtcgcgggt cggtgcggcg ccgctctggg cgttcgcgcc cgggagctcg ttgccgacgc
     2941 tgaccgcgcc ttcgctgttg ccggcgactt ggctctcggc gcgggtctgc gtggaacgca
     3001 ccacccggct ctcgggatcg aaggtctcgg aacggctctc gacccggttg agatcgagct
     3061 cggcggcgac ctgcacgcgg gcgcgcccgg ctccgaccac gccggcgacg atctcttcca
     3121 cctgcgtgcg caggcgtcgc tcgacggtcg cctgcttttc gtcggcggcg aggccggccg
     3181 cggatccatc cgattgcgca ccgtcggcga gcaggcgccc gcgttcgtcg acgatcgaga
     3241 cgcgctcggg cttcaggcct tcgacggccg aggcgacgag gtggcgcacg gcgcgaacct
     3301 ggcccggctc cagctcgccg cggagcttga gcacgatcga ggcgcgcggc gactcgcggt
     3361 cgcgctcgaa cagccggcgt tcggggatca cgagatgaac gcgcgcggcc tgcacgcggc
     3421 cgatcgtgcg aatggtgcgc gacagctcgc cctcgagggc gcgcaggtga ttgatgccct
     3481 ggacgaagct cgtcgacgag aaggcgtcgc ccttgtcgaa gatctcgtag ccgacgccgc
     3541 cgcccgccgg caaacccttg ccggcgagat ccatgcggat gcgcgcgaga tccgaccggg
     3601 gcaccagaag cgtctgaccg tcgccgcgcg tctcgtaacg gacgttgcgc gcatcgaggt
     3661 cgcgcacgat ggctccggca tcctgcggcg acaggtcgga gaacagcacg cccatggctg
     3721 gctgcgacac gcgcacgatc acgtaggcga aaaaacccac cagcgccaac gtcacgacgc
     3781 ccatcatcgc gaggcgtgct agacccagcc gcgtcagaaa ttcgatcgcc ccgttcaccg
     3841 cctcagaacc cgctgattct ccggaacgca ttgcctcacg cccggtaggc aagaatttcc
     3901 taggtctgag ttagcggttc gttaacgcgc gacgaaactg gcgcacccgc gtgcgccagt
     3961 tatgtcggac aggaggtcgc agcggggcga cgcgcgaggc ttattgccgg taatgctgga
     4021 tgcgcgtggt gcgcaggccg gcgaggccat gctggtcaat cgattgctgc cagctcagga
     4081 attcctcgac ggtgagggtg tagcgccggc aggcctcttc gaggctgaga aggccgccgc
     4141 gcacggctgc cacgacctcg gccttgcgcc ggatgaccca gcgtcgcgtg ctgggcggcg
     4201 gcaaatccgc aatggttagc ggactgccgt ccgggccgat aacatatttc accctcgaac
     4261 gatggggctc agtcatgata cgctcacaca aactcgacgg accattacct ccgacaatag
     4321 gccgcgccgt ttaaaatttg cctaagcgaa acccatacgc ggcaattaaa attcgcctaa
     4381 tccgaagctg cagccgcgct taacggtggc taacgaatcg cacccgggaa accgtctgcc
     4441 gttgctgatc gcgcagcctg gccctgcctt cagccggcgc cgcgcgacag cgagcgcaca
     4501 ttcgggagcg gcacgcggaa cgagccgatc atcaggaccg gcacctcgcc ggacaggtcg
     4561 accgaggtca ccttgccgga aatttccgat ttcacggaga cgccctggcc ggtggcatcg
     4621 cgcgcggtta ccgtcatcgt gtaatcaccg tccggggcgc gcgtgcccgt catggttcgt
     4681 ccgtcccact cgtagttctg cgcgcctgcg gaaagcgcct tggtctgcgc ggcaacgatg
     4741 ttgcctttct tgtccgtgat caggatctcg gcctgcgcgt tgcgcgccgc gttgagcacc
     4801 cacgtggcct tgccgttggc cagccgcgac gaggccccgt cggccgagac ctccatgccg
     4861 acgaagctcc cggcggtcga attcgccgag gcccgcacgc tggtcagcag cgagttgagg
     4921 gtgtcgttcg acttgagctg ttgctcgacc gacgcgaact gcacgagttg ctgcgtgaac
     4981 tggttggtgt cgagcgggtc gagcggactc tggttcttga gctgcgtcgt gagcagcagg
     5041 aggaacgcgt cgaagttctg cgccatcgtg gtgcgcgtcg tgctggacga accggcggtg
     5101 gcggcagtcg cggcggcgcc gacgcccgtg gggattgttg ccatggtgaa gccttcctgc
     5161 cggtatgaga tcagatgcgg acgtcgacgc cggtgctgcc gggccagatg cggcgtggcg
     5221 gaggcggcgc tgcttcgcga ggctcgcgcc cggtttcggc gccggcgacg cgcggcgctt
     5281 cgcggccttc gcccgattgc tgccggccct ggccctgatg ctgctgctgg tcacgcagcg
     5341 aaaggttgac gccgccgtcc gaggatttca ggccggcctg ctcgaacgcc cgctcgagcg
     5401 tgcgcgcgtc gcgctgcagc agcgccagtg tctcgacctt gtcgaccgtg agatgcgcct
     5461 tgacctcgcc cttgtcgtcg atctcgaggc tcacgtcgat gcggccgaga tcgcccggat
     5521 caaggcggat ctcgaagcgg ttgatgccgg cgagggtttt cagggc
//
LOCUS       DATAIQ010000314         2693 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_385204, whole genome shotgun sequence.
ACCESSION   DATAIQ010000314 DATAIQ010000000
VERSION     DATAIQ010000314.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2693)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2693)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2693
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_385204"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..233)
                     /locus_tag="VHN20_05360"
     CDS             complement(<1..233)
                     /locus_tag="VHN20_05360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX2725228.1"
                     /translation="MSRHIFPAETRPARLDPLAKLPVFLDLEGRHAAIAGGGDGAAWK
                     AELLAAAGATVTVFGSEPDQELSILAEASDGAI"
     gene            complement(234..1964)
                     /locus_tag="VHN20_05365"
                     /pseudo
     CDS             complement(234..1964)
                     /locus_tag="VHN20_05365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012335185.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004783 - sulfite reductase (NADPH)
                     activity [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent assimilatory sulfite reductase
                     hemoprotein subunit"
     gene            complement(1979..>2693)
                     /locus_tag="VHN20_05370"
     CDS             complement(1979..>2693)
                     /locus_tag="VHN20_05370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015950911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="sulfite reductase subunit alpha"
                     /protein_id="HEX2725229.1"
                     /translation="DLLETFPASLERDQLLALTRPLPPRAYSIASSRTEVGDEAHLLI
                     AAVRYETHGRARAGVASTYVADRLKTGGTVKVALKPNRHFRLPDAATDIIMVGPGTGI
                     APFRAFVQERRATGASGRNWLFFGNRRFTHDFLYQLEWQEALADGSLARLDLAFSRDA
                     PEKVYVQDRLWAQRRDVVDWLESGARLYVCGDAKAMAKDVRAALARILADVKALSPEA
                     AEAAVTGLDRDRRYLQDVY"
BASE COUNT          401 a          888 c          951 g          453 t
ORIGIN      
        1 ctgatggccc cgtcgctcgc ctccgccagg atgctcagct cctgatccgg ctcgctgccg
       61 aagacggtca ccgtcgcgcc cgcggcggcg agaagctccg ccttccaggc ggcgccatcg
      121 ccgcctcctg cgatggcggc gtgccttccc tcgaggtcga ggaacaccgg cagcttggcg
      181 agcgggtcca ggcgcgccgg tcgcgtctcc gccgggaaga tgtggcggct cattcaggca
      241 gcctccggag ccgatgccgg cgcgcggagc gggcccgtat tggcgtggaa atcggcgccg
      301 ttgccggtcc cggcgatgag cttggcgcgg atcaggaacg cgctgaagcg ctcgcccttg
      361 cgtcgtcctt tggcgtaggc ggcaaacagc ggatcgagcg ccgccacgat gccgtcatgc
      421 gccacgtctt ccgcatagag cttggacagg cgcgagccgt cgaaggcgcc gccgagatag
      481 aggttgtagc ggccgggccc tttgccgacg aggccgatct cggcgatgta gggccgggcg
      541 caaccattcg ggcagccggt catgcggatt gtgatctcgt cctcggcgag gccgtgtgcg
      601 gcaagacgct cttcgagcac ggtcaccaga gccggcaggt agcgctcgct ttcggccagg
      661 gcgaggccgc aggtcggcag cgccacgcac gccatggcgt tgcgccgcag cgccgtcgcc
      721 tcggccgtca ggccgtgcgc ggcaacgagc gcgtcgatgg cggcccggtt ctccgggcgc
      781 acattggcga cgatcacgtt ctggttggcc gtgcagcgga attcgccgtc atggatctcg
      841 gcgatacggc gcagcccggt gaggagcgac gcgccccctg gcacgtcgcg cagccggcca
      901 ttctcgatga acaaggtcag gtgaaacagg ccattctcgc cctcgaccca gccgtagcgg
      961 tccccgttcg aggcgaagct gaacggacgc ggatcctcga gcctcttgcc gatgcgccgc
     1021 tccacctcgg cgcggaaggc ggccaggccg cggtcctcga tcgtgtattt gaggcgcgca
     1081 tgcttgcggc tcgtgcggtc gccccagtcg cgctgcacgc tgaccacggc ctcggcgacg
     1141 gtgagcgcgt cctcggggcg gcagaaagcc atcacatcgg ccgtgcgcgg ataggtgtcg
     1201 ggctcgccgt gcgtcatgcc catgccgccg ccgacggtca cgttccagcc ttcgagctgg
     1261 ccccgcttgt ccaggatcgc gatgaagccg agatcctgcg caaacacgtc gacgtcgttg
     1321 tccggcggca cggcgacgac cgtcttgaac ttgcgcggaa ggtaggtgcg gccatagatc
     1381 ggctccacca cctcgtcctc gccgccgatg atcttttcgc cgtcgagcca gatctcgcga
     1441 taggcgggcg tgcgcggcag gagatggtcg gagatgcttt tcgcgagctc ataggccgcc
     1501 gcatggacgt gcgaacggtg cgggttcgac gccgcgagca cgttgcggtt gacgtcgccg
     1561 cacgcggcca gcgtgtcgag cagcgccgca ttgatggcct gcatggtgcg cttgagattc
     1621 gacttgatga cgccgtggaa ctggaacgtc tgccgcgtgg tcagacggag cgtattgccg
     1681 gcgtagtcgc gcgcgatgcg gtcgagctgc agccactgtg cgggcgtgca cacgccgccc
     1741 gggatgcgca ggcgcaccat gaacgagaag gccttttcca gcttcttctt cgtgcgctcg
     1801 gccctgaggt cgcggtcgtc ctgcagatac atgccgtgga acttgaccag ctgctgatcg
     1861 tcctcggcga tcgccccagt ctcggccttg gtgagcccgt cggcgacggt gccgcgcaaa
     1921 tacgcgctgg cttccttgat gcgctcattg cgcgacaatt cggacatgaa aaacctgctt
     1981 agtagacgtc ttgcagatag cgcctgtcgc gatcgagacc ggtgaccgcg gcttcggccg
     2041 cctcgggcga cagcgccttc acgtcggcga ggatgcgggc aagcgctgcg cgtacgtcct
     2101 tggccatcgc cttggcgtcg ccgcacacgt aaaggcgtgc cccactctcc agccagtcga
     2161 ccacgtcgcg ccgctgcgcc catagccggt cttggacgta gaccttttcg ggcgcatctc
     2221 tggagaaggc gagatcgagc cgggcgagcg agccgtcggc gagcgcctcc tgccattcga
     2281 gttggtagag gaagtcgtgc gtgaagcggc ggttgccgaa gaacagccag ttgcgcccgc
     2341 ttgcgccggt tgcgcggcgc tcctgcacga aggcgcggaa cggcgcgatg ccggtgcctg
     2401 gcccgaccat gatgatgtcc gtcgctgcat ccggcaggcg aaaatgcctg ttgggcttca
     2461 aggcgacctt gaccgtgcca ccggtcttga gacggtcggc gacgtaggtc gaggcgacgc
     2521 cggcgcgggc gcgtccatgc gtctcgtagc gcacggcggc gatcagaaga tgcgcctcgt
     2581 cgccgacttc ggtgcgcgac gacgcgatcg aataggcgcg cggcggcagc ggccgtgtca
     2641 gggcgagaag ctggtcccgt tcgagggacg cggggaacgt ttcgagcagg tcg
//
LOCUS       DATAIQ010000315         2142 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_293577, whole genome shotgun sequence.
ACCESSION   DATAIQ010000315 DATAIQ010000000
VERSION     DATAIQ010000315.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2142)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2142)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2142
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_293577"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(150..512)
                     /locus_tag="VHN20_05375"
     CDS             complement(150..512)
                     /locus_tag="VHN20_05375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725230.1"
                     /translation="MAFVAGAGRASAQYGGWVEPRWNYQGSAVCPERYDFDDGWCKPR
                     GAGYYGEGGGSPALPPRWTPDGSAVCPSGYDYLSGACRRRSPEFEYGAIPPRWNRAGQ
                     AVCPQYHDFIGGMCRPRG"
     gene            complement(729..1676)
                     /locus_tag="VHN20_05380"
     CDS             complement(729..1676)
                     /locus_tag="VHN20_05380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725231.1"
                     /translation="MTDKPGDTIVKNGRTLKKFVNEISGPVFSLPWLVARDEGLFEEE
                     GLAVEFIKARQPQGLPRIVTDPRLVPSIAGHKPFEDNEAAAYRACHWGQVRRAYDSER
                     GGRIAGKRSAIGVQAIISAPGSKFTHPQTLAGEPVAVRFHRGSHYATLQLLEGFLKRD
                     EIKTVNMSHEEGYEAVRSGEIAAVSLMDPWITLAEKEDFQVIAETHYVGTEIAAPDVD
                     AETWEAINRAIKVAVRRINADKKKYVHYFFDYLPAKYHHLITVDDFHLPRLRYVDPAP
                     YDAREFEQTQEWLVTWGLIEADACFERLVDTRLHDAIPA"
     gene            complement(1728..>2142)
                     /locus_tag="VHN20_05385"
     CDS             complement(1728..>2142)
                     /locus_tag="VHN20_05385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725232.1"
                     /translation="AQALVQQKIDTGELKVIVSFAPERRPGFESVPTVYEYAKSGEDR
                     QVLDFMFGPQVLGRPHFVPPGVPVERVEALRRAFDATMKDEGFVADAKKSGMDLDPFS
                     GAEIEKRIQALYATPPAIVERGIAARQQGKERPSR"
BASE COUNT          369 a          697 c          700 g          376 t
ORIGIN      
        1 gagcttgacg cggatcgaca tggactgcac gcgaatcatg gcagcctcgc aatacatgcg
       61 gcaaagggac gagtttggcc gcggctcgtt aacgtctggt gaccatttcg cagcagcgtg
      121 tgcggaagct tcggatgtgg cccgcagcgt cagccgcgcg gccggcacat ccccccaatg
      181 aagtcatgat attgcgggca gaccgcctgg cccgcacggt tccaccgtgg cgggatcgcg
      241 ccatattcga attccggcga acgccgccgg catgcgccgc tcagatagtc gtagccgctc
      301 ggacagacgg ccgagccgtc aggggtccag cgcggcggca gtgcagggct gccgccaccc
      361 tcgccataat agcccgcgcc gcgcggcttg caccagccgt cgtcgaagtc gtagcgctcc
      421 gggcaaacgg cggagccctg ataattccac cgcggttcga cccagccgcc atattgggcc
      481 gaggcgcggc cggcaccggc cacgaacgcc atgaaagcga gcaccgcaaa caaagcaatt
      541 cgcacgagcg acccccagcc aaggcttcct caagcaatgc acggccgaga ttaacgaagc
      601 cagaacgatg caaggggcgg aagtgcgaga gcgcggcgcg ggctcgccgg aaattaatgc
      661 cataaacgaa gcgggaccgc tcgattttcg gagcggtccc gcatgacggc ggaagcttta
      721 agccggcgct acgccggaat cgcgtcgtgc aggcgcgtgt cgacgaggcg ctcgaagcag
      781 gcgtctgcct ctatcaggcc ccaggtcacg agccattcct gcgtctgctc gaactcgcgc
      841 gcatcgtagg gcgcgggatc gacatagcgc agacgcggca gatggaagtc gtcgacggtg
      901 atcaggtggt ggtatttggc cggcaggtag tcgaagaaat aatgcacgta tttcttcttg
      961 tcggcattga tgcgccgcac cgcgactttg atggcgcggt tgatagcctc ccaggtctcg
     1021 gcatcgacgt ccggcgcggc aatctcggta ccgacatagt gcgtctcggc gatgacctgg
     1081 aagtcctcct tctcggcgag cgtgatccac ggatccatca gcgacacggc ggcgatctcg
     1141 ccggagcgaa ccgcttcgta gccttcctcg tggctcatgt tgacggtctt gatctcgtcg
     1201 cgcttgagaa agccctcgag cagctgcagc gtcgcgtaat gcgagccgcg gtggaagcgc
     1261 accgcgacgg gctcgccggc gagcgtctgc ggatgcgtga acttcgagcc tggtgccgag
     1321 atgatggcct ggacgccgat tgccgagcgc ttgccggcga tgcggccgcc gcgctcgctg
     1381 tcgtaggcgc ggcgcacctg gccccaatgg caggcgcggt aggcagccgc ttcgttgtcc
     1441 tcgaagggct tgtggccggc gatcgagggc acgaggcgcg ggtcggtgac gatgcgcggc
     1501 aggccctgcg gctggcgcgc cttgatgaat tcgaccgcca gcccctcctc ctcgaacagg
     1561 ccctcgtcgc gcgcgaccag ccacggcagc gagaagaccg ggccggaaat ctcgttgacg
     1621 aatttcttga gggtcctgcc gttcttgacg atggtgtcgc cgggcttgtc tgtcatgtcc
     1681 tcaggtcctt tcctcgggtt gcaactgtca gtgataaaat ccccggctca gcggctcggc
     1741 cgctccttgc cttgctgacg cgccgcgatg ccgcgttcga cgatcgcggg cggcgtcgcg
     1801 taaagcgcct ggatgcgctt ctcgatctcc gcgccgctga acggatcgag atccatcccg
     1861 ctcttcttcg catcggccac gaagccttcg tccttcatgg tcgcatcgaa ggcacggcgc
     1921 aatgcctcga cgcgctcgac cggcacgccg ggcggcacga aatgtggccg gccgagcacc
     1981 tgcggcccga acatgaagtc gaggacctgc cggtcttcgc cgctttttgc gtattcgtat
     2041 acggtcggca cgctctcgaa gcccggccgt cgctccggcg cgaacgagac gatcaccttg
     2101 agctctccgg tatcgatctt ttgctgcacg agcgcctgcg cc
//
LOCUS       DATAIQ010000316         2534 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_108709, whole genome shotgun sequence.
ACCESSION   DATAIQ010000316 DATAIQ010000000
VERSION     DATAIQ010000316.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2534)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2534)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2534
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_108709"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(111..518)
                     /locus_tag="VHN20_05390"
     CDS             complement(111..518)
                     /locus_tag="VHN20_05390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725233.1"
                     /translation="MSIIPATSIPADIPEDWLEDGCEIIQPSAPVFDGDWMLLSRDAQ
                     TGRTVWILETDTAYVVKTEYPACDELLDHNTVIRNETSGQRWGDTRLVASIPEHIYFR
                     EIAPARQQGDETYIKRWLNNSDHAAFRTFHGKV"
     gene            complement(515..847)
                     /locus_tag="VHN20_05395"
     CDS             complement(515..847)
                     /locus_tag="VHN20_05395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725234.1"
                     /translation="MSKKTEAAVTAAETAVKETAEAAAAVSAAAQAVADAAREAPAAA
                     AAERTLFVEFKRNYRPHNVPEEGRSDSCWKYRAGQRAHLPYAEARRAVGLEIAAVAFE
                     DEPAEDAA"
     gene            complement(910..1248)
                     /locus_tag="VHN20_05400"
     CDS             complement(910..1248)
                     /locus_tag="VHN20_05400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725235.1"
                     /translation="MADLRNGVSTVSGLTASTTQTQAGANALDPGILSHRVTTVASAG
                     DAVRLPPAKEGRVLFVVNAAAANAMGVFPASNDAINALAADAVYSVAANKAVVFVCTN
                     AGRWHTILTA"
     gene            complement(1308..2306)
                     /locus_tag="VHN20_05405"
     CDS             complement(1308..2306)
                     /locus_tag="VHN20_05405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017276896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5309 domain-containing protein"
                     /protein_id="HEX2725236.1"
                     /translation="MAQASGTFDTYDSARNRETFADLIAMISPEETPFQSLIGTQDLE
                     GTHPEWSTDPLGTPVTTNAQIEGDEYSYTAPAATTRVGNYTQIARKAYIISRTHEIVA
                     KAGKKSELGRERAKKGLELRQDIEVQMLSNTASVAGSSAAARVSGGLRAWLATNDSMG
                     ATGASGGFSAGLVTAATNGTQRAFTKAIMDDVILNTYNAGGTPTVWLTSPYVKTVFST
                     FMSDANVAAFRTAQTGKKQGTIYGAADVYVSNFGPLDVIPNRQMARTGAAVARNAFLI
                     TPNMVTKGVLRPISEDKVARTGDAEKRVLITEYALIVKNEAAHGVAADLFGLTAAS"
     gene            complement(2318..>2534)
                     /locus_tag="VHN20_05410"
     CDS             complement(2318..>2534)
                     /locus_tag="VHN20_05410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725237.1"
                     /translation="MIVVQKALAYERLQAARPKAEAKVAAAPPVAQPAKRPTRTERER
                     GQMNEQVSRLRKTGDFDTRVALLSRFD"
BASE COUNT          343 a          812 c          923 g          456 t
ORIGIN      
        1 attgcgcagt atggaaaggc cggcacacca aactacgcct atctcggccg cttcagaacg
       61 gccgaagagg cgtccgccgc gtatgaggcg cacaggcagg gcatcctcgc tcaaaccttg
      121 ccatgaaatg tgcggaaggc ggcgtggtcg gaattgttga gccaccgctt gatgtatgtc
      181 tcgtcgccct gctggcgggc gggcgcgatc tcgcggaagt agatgtgctc cgggatcgac
      241 gcgaccaggc gcgtgtcgcc ccagcgctgc ccggacgtct cgttgcggat caccgtgttg
      301 tggtcgagga gctcgtcgca ggccgggtat tccgtcttca cgacgtaggc cgtgtcggtc
      361 tccaggatcc acaccgtgcg cccggtctgg gcgtcacggc tgagcagcat ccagtcgccg
      421 tcgaagaccg gcgccgacgg ctggatgatc tcgcagccgt cctcgagcca gtcctccggg
      481 atgtcggccg ggatgctggt cgccgggatg atgctcacgc ggcgtcctcg gcgggctcgt
      541 cctcgaacgc gacggccgcg atctcgaggc cgacggcgcg cctggcctcg gcgtagggca
      601 gatgggcgcg ctggccggcg cggtatttcc agcagctgtc gctgcggccc tcctcgggca
      661 cgttgtgcgg gcggtagttg cgcttgaact cgacgaacag cgtccgctcg gccgcggctg
      721 cggcgggcgc ttcgcgggcg gcatcggcga cggcctgggc tgcggcgctg acggcggctg
      781 cggcctcggc ggtttccttg acggcggttt cggcagccgt gacggccgcc tcggtcttct
      841 tgctcacggg cttctccaat gaaaaagggc cgctcggaag cggccctcgg gttgtgacgc
      901 gcgcgttcgt tacgccgtca ggatggtgtg ccagcggccg gcgttcgtgc agacgaacac
      961 aacggccttg ttcgcggcca ccgagtagac ggcgtcggcc gcgagcgcgt tgatcgcgtc
     1021 gttcgaggcc gggaacaccc ccatggcgtt ggccgcggca gcgttgacga cgaacagcac
     1081 cctgccctcc ttggcgggcg gcaggcgcac ggcatcgccc gcgctggcga ccgtcgtgac
     1141 gcggtgcgag aggatgcccg ggtcgagcgc gttggcgccc gcctgcgtct gggtggtcga
     1201 ggcggtgagc ccgctgacgg tgctcacgcc gtttctgagg tcagccattc aggcctccaa
     1261 aggaaaaggg cggcccgcga aggccgccca tggttgaagg gaatggctta cgacgccgcg
     1321 gtcaggccga agaggtcggc cgccacgccg tgcgcggcct cgttcttcac gatcagcgcg
     1381 tattcggtga tgagcacgcg cttctcggcg tcgccggtgc gcgcgacctt gtcctcgctg
     1441 atcgggcgca gcacgccctt ggtcaccatg ttgggggtga tcaggaaggc gttgcgggcg
     1501 accgcggcgc cggtgcgcgc catctggcgg ttcgggatga cgtcgagcgg gccgaagttc
     1561 gacacgtaga cgtcggccgc gccgtagatg gtgccctgct tcttgccggt ctgcgccgtg
     1621 cggaaggccg cgacgttagc atccgacatg aaggtcgaga acaccgtctt cacatacggg
     1681 ctcgtcagcc acaccgtcgg cgtgccgccg gcgttgtagg tgttcaggat cacgtcatcc
     1741 atgatcgcct tggtgaaggc gcgctgggtg ccgttggtgg ccgccgtgac gaggccggcc
     1801 gagaagccgc ccgaggcgcc ggtggcgccc atcgagtcgt tggtggcgag ccaagcgcgc
     1861 agaccgcccg agacacgcgc cgcggcggac gagccggcga cggacgcggt gttcgagagc
     1921 atctgcacct cgatgtcctg gcgcagctcg aggcccttct tggcgcgctc gcggccgagc
     1981 tcggacttct tgcccgcctt ggccacgatc tcgtgcgtgc gcgagatgat gtaggccttg
     2041 cgcgcgatct gcgtgtagtt gccgacgcgc gtggtggccg ccggggcggt gtacgagtat
     2101 tcgtcgcctt cgatctgggc gttggtcgtg accggggtgc cgagcgggtc ggtcgaccat
     2161 tccggatggg tgccctcgag atcctgcgtg ccaatcagcg actggaacgg ggtctcttcg
     2221 ggcgagatca tcgcgatcag gtcggcgaag gtctcgcggt tgcgggcgga atcgtaggtg
     2281 tcaaaggttc ctgaggcctg ggccatgggt tcaagtccta gtcaaagcgt gagaggagag
     2341 cgactctggt gtcgaagtcg ccggttttcc tcagcctgct gacctgttcg ttcatctgcc
     2401 cgcgctcgcg ctcggtgcgc gtcggccgct tggccggctg tgcaaccggc ggcgccgccg
     2461 cgaccttggc ttccgccttc ggcctcgcgg cctgcaagcg ctcataggcg agcgccttct
     2521 gcaccacgat catc
//
LOCUS       DATAIQ010000317         2953 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_385464, whole genome shotgun sequence.
ACCESSION   DATAIQ010000317 DATAIQ010000000
VERSION     DATAIQ010000317.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2953)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2953)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2953
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_385464"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..845
                     /locus_tag="VHN20_05415"
     CDS             <1..845
                     /locus_tag="VHN20_05415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2725238.1"
                     /translation="SYALFPHLSVFENVAFGLRRRAVRGADLRGRVEYMLGIVGLEGM
                     GKRKPRQLSGGQQQRVALARALVNKPQVLLLDEPLGALDLKLRKQMQLELKAIQHDVG
                     ITFIHVTHDQEEAMTMADRIAVMDRGKLVQVATPAEIYEQPRTRFIAEFVGDVNILDG
                     KVAGREDGMWRIASASAAAPLVVDDPDEVLENGQEIALAIRPEKMTLQRQPPVAGQNV
                     LAGQVWDIGYLGDWTVYRVKLDSGVMARVSCANVSRFVEAPVSWEDRVYLSFAPQSAV
                     ILTR"
     gene            850..1767
                     /locus_tag="VHN20_05420"
     CDS             850..1767
                     /locus_tag="VHN20_05420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015933101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX2725239.1"
                     /translation="MTLTSLRARIARTIVPALPFLWLAVFFLLPFIIVVKISLSDPAT
                     AQPPYRPVLDASQGFGGLRDLVAKLDVENFAALLGDDLYLQAALSSVRIAAISTALLL
                     LIGYPVAYAMARAPARWRPLLIALVILPFWTSFLIRVYAWIGILRPEGVLNQALMLLG
                     LTSEPLAVLNTETAVFIGIVYAYFPFMILPLYASLERLDETLIEAAQDLGCPPWKAFW
                     AITLPLSLPGAIAGALLCFIPIVGEFVVPDLLGGSDTLMIGRVLWSEFFSNRDWPLAS
                     AVAVALLLILVIPIVIFRDVEARRIEARR"
     gene            1764..2564
                     /locus_tag="VHN20_05425"
     CDS             1764..2564
                     /locus_tag="VHN20_05425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX2725240.1"
                     /translation="MRRRFTWVNATALTIGFTFLYLPILILIVYSFNASRLVTVWGGF
                     STRWYAALWRNEALLDAAFVTLRIALLSATAATVLGTLAALTLTRYGRFRGRTLFTGM
                     VYAPMVMPEVITGLSLLLLFVALGFDRGFWTVTLAHTTFCMCFVTVVVQSRLVALDRS
                     LEEAAMDLGATPLTTFMWVTLPLIAPAIVAGFLLAFTLSFDDLVIASFTSGPGATTLP
                     MRIYSQVRLGVTPEINAASTILIALVTVAVIGATFAAKRSALDTRALH"
     gene            complement(2558..>2953)
                     /locus_tag="VHN20_05430"
     CDS             complement(2558..>2953)
                     /locus_tag="VHN20_05430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725241.1"
                     /translation="RRIERRPLSAPLGWRGGRTPFDQIHLNVALAEGSAEITDGSISA
                     TNVRGTLQGRASLVDRLLAVKLNVEGAPGGAAQGGASVVFDVNGPWDDVTVTPDVQAL
                     IQRSGAAQQLLGQRGQGDGGRDASAAAGQ"
BASE COUNT          390 a         1027 c          986 g          550 t
ORIGIN      
        1 agtcctacgc actctttccg cacctctcgg tgttcgagaa cgtggccttc gggctgcgcc
       61 ggcgggccgt gcgcggcgcc gatctccgcg gccgtgtcga gtacatgctc gggatcgtcg
      121 ggttggaggg catgggcaag cgcaagccgc ggcagctctc cggcggccag cagcagcgtg
      181 ttgcgctcgc acgtgcgctc gtgaacaagc cgcaggtgct gctgctcgac gagccgctgg
      241 gggccctcga cctcaagctg cgcaagcaga tgcagctgga gctgaaggcg atccagcacg
      301 acgtcggcat cacgttcatc cacgtcacgc acgaccagga ggaggcgatg acgatggccg
      361 atcgcatcgc cgtcatggac cgcggcaagc tggtgcaggt ggcgacgccc gccgagatct
      421 acgagcagcc gaggacgaga ttcatcgccg aattcgtcgg cgacgtgaac attctcgacg
      481 gcaaggtcgc ggggcgcgaa gacggaatgt ggcgcatcgc gagcgcgtcg gccgccgcgc
      541 cgctcgtcgt cgacgatccc gacgaggttc tcgagaacgg ccaggagatc gcgctcgcga
      601 tcaggccgga gaagatgacg ctgcagcgcc agccccctgt cgccggccag aatgtcctcg
      661 ccggccaggt gtgggacatc ggctatctcg gcgactggac ggtgtatcgc gtcaagctcg
      721 attccggcgt aatggcgcgc gtgtcctgcg ccaatgtgag ccgcttcgtc gaggctcccg
      781 tgagctggga ggatcgcgtc tacctgtcgt tcgcgccgca atccgcggtg atcctgacgc
      841 gctgacatga tgacgttgac ctccctgcgc gcgcgcatcg cacggacgat cgtgccggcc
      901 ctgccgttcc tttggctggc cgtgttcttc ctcttgccct ttatcatcgt ggtgaagatc
      961 agcctgtcgg atccggccac ggcgcagccg ccgtaccgcc ccgtgctcga cgcgagccag
     1021 ggattcggcg ggctgcgcga tctcgtcgcc aagctcgatg tcgagaattt tgcggcgctg
     1081 ctcggcgacg atctctacct gcaggcggcc ctctcgtcgg tgcgcatcgc cgcgatctcg
     1141 acggcgctgc tgctcctgat cggctacccg gtcgcctacg cgatggcgcg cgcgccggcg
     1201 cggtggcggc ctttgctgat cgcgctcgtc atcctgcctt tctggacgag cttcctgatc
     1261 cgcgtctatg cctggatcgg catcctccgc cccgaaggcg ttctcaacca ggcgctcatg
     1321 ctgctcggac tgacgtcgga gccgctggcg gtcctcaaca ccgagaccgc cgtcttcatc
     1381 ggcatcgtct acgcgtattt cccgttcatg atcctgccgc tctacgcctc gctcgagcgg
     1441 ctcgacgaga cgctgatcga agcggcgcag gatctcggct gtccgccctg gaaagcgttc
     1501 tgggcgatca cgctgccgtt gtcgctgccc ggcgccatcg ccggcgcgct gctgtgcttc
     1561 attccgatcg tcggcgagtt cgtggtgccc gatctcctcg ggggttccga cacgctgatg
     1621 atcgggcgcg tcctgtggag cgagttcttc tcgaaccgtg actggccgct cgcgtccgcc
     1681 gtcgccgtcg cgctgctcct gatcctcgtc atcccgatcg tgatcttccg ggacgtggag
     1741 gcacgccgca tcgaggcgcg gcgatgagaa ggcgcttcac ctgggtcaac gccacggcgc
     1801 tgacgatcgg cttcacgttc ctctatctgc cgatcctgat cctgatcgtc tattcgttca
     1861 atgcctcgcg cctggtcacc gtgtggggcg gcttctcgac gcggtggtat gccgcgctgt
     1921 ggcgcaacga ggcgctgctc gacgccgcct tcgtgacgct caggatcgcg ctgttgtcgg
     1981 cgacggcggc gacggtcctc ggcacgctcg ccgccctcac gctcacccgc tacgggcgct
     2041 ttcgcggccg caccctgttc accggcatgg tctatgcgcc gatggtgatg ccggaggtga
     2101 tcacggggct gtcgctgctt cttctgttcg tggcgctcgg cttcgaccgc ggcttctgga
     2161 cggtaacgct cgcgcacacg acgttctgca tgtgcttcgt cacggtcgtg gtgcagtcgc
     2221 gcctcgtggc cctcgaccgc tcgctcgagg aggcggccat ggatctcggc gcgaccccgc
     2281 tcacgacctt catgtgggtg acgctgccgc tgatcgcgcc cgccatcgtc gccggcttcc
     2341 tgctcgcctt cacgctgtca ttcgacgatc tcgtgatcgc gagcttcacg tcaggcccgg
     2401 gggcgacgac tttgccgatg cgcatctaca gccaggtcag gctcggcgtg acgcccgaga
     2461 tcaatgccgc atcgacgatc ctgatcgcgc tggtcacggt ggcggtcata ggggcgacgt
     2521 tcgccgccaa gcgcagcgcg ctggatacgc gcgcccttca ctgacccgcg gcggcggacg
     2581 cgtcgcggcc gccatcgcct tgcccgcgct gcccgagaag ctgctgcgcg gcgcccgagc
     2641 gctggatcag ggcctgcacg tccggcgtga ccgtcacgtc gtcccagggg ccgttgacgt
     2701 cgaacacgac ggacgcgccg ccttgcgcgg cgccgcccgg cgccccttcg acgttgagct
     2761 tgacggcaag caggcggtcg accagcgacg cgcgcccctg cagggtgccg cgcacattcg
     2821 tggcgctgat gctcccgtcg gtgatctccg cgctgccctc ggcgagggcg acgttgagat
     2881 ggatctggtc gaagggcgtg cggccgccgc gccacccgag cggcgccgac agcggccggc
     2941 gctcgatgcg gcg
//
LOCUS       DATAIQ010000318         1830 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_238389, whole genome shotgun sequence.
ACCESSION   DATAIQ010000318 DATAIQ010000000
VERSION     DATAIQ010000318.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1830)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1830)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1830
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_238389"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..549)
                     /locus_tag="VHN20_05435"
     CDS             complement(<1..549)
                     /locus_tag="VHN20_05435"
                     /EC_number="6.3.1.14"
                     /inference="COORDINATES: protein motif:HMM:NF014015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diphthine--ammonia ligase"
                     /protein_id="HEX2725242.1"
                     /translation="MTGAVSWSGGKDCCLAMHRARAAGLDVSVLLAMFDETGERTRSH
                     GIPRALMQAQAEALGLELVAAGATWADYEKTFVAALTELRGRGVTDVVFGDIDLVPHR
                     EWEEKVCAAAGVRPSLPLWQQDRRALAEEVLGLGYRALVVCTDDRWLDAGWCGRVYDR
                     AFIDRLPAGVDACGENGEFHTFV"
     gene            853..1464
                     /locus_tag="VHN20_05440"
     CDS             853..1464
                     /locus_tag="VHN20_05440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725243.1"
                     /translation="MVGFLNTARLELSFDKLKDFDVLNVNTYNTLGTSLKFDLETSEP
                     MELLVFYNDVDEAKRLVRKSTVSLKNFKLNSRVQGHLVDDDLQKTKFNVTGYYNTERL
                     VLSHRGPFGGLGIYVLEQRQLKDVDYPVFSGFVIMENQLSESARGTSLTQCPCVMVSA
                     SAPAKYTQVEVAEATYPFLTKGCSQISLPDLWQGASASAPSPG"
     gene            complement(1611..>1830)
                     /locus_tag="VHN20_05445"
     CDS             complement(1611..>1830)
                     /locus_tag="VHN20_05445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020092725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HEX2725244.1"
                     /translation="GQEKYTTEVVLQRFRGELTLLDSRGGGGGEMGDDDRGSRGEFGR
                     SSPMEKRPAMAESGGSRFASDLDDDIPF"
BASE COUNT          319 a          621 c          572 g          318 t
ORIGIN      
        1 cacgaaggtg tggaactcgc cgttttcccc gcacgcatcg accccggcag gcaggcggtc
       61 gatgaaggcg cggtcgtaga cccggccgca ccagccggca tcgagccagc ggtcgtcggt
      121 gcacacaacc agcgcacggt aacccagccc tagaacctcc tcggcaagag cgcgccggtc
      181 ctgctgccag agcggaaggc tcggccgcac gccggcggcg gcgcagacct tttcctccca
      241 ttcgcgatgc ggcacgagat cgatgtcccc gaacaccacg tcggtgacgc cgcggccgcg
      301 cagctccgtc agggcggcga cgaaggtttt ttcgtaatcc gcccaggtcg cgcccgcggc
      361 gaccagctcg aggccgagcg cctcggcctg ggcctgcatc agcgcgcgcg ggatgccgtg
      421 cgagcgtgtg cgctcgccgg tctcgtcgaa catggcgagc aggaccgaga cgtcgagccc
      481 cgccgcccgc gcccggtgca tggcgaggca gcaatccttg ccgccgctcc atgacacggc
      541 cccggtcatg gggagccgaa ctcaggacgt aatgccagag ccattacaac gatcctctgc
      601 ggtcaatttc gcgatttggg cgccgttcct aacagtgtcc ggcgaaggtg gctcccggtg
      661 atgtgaccgg gtgcacactc gcccgcccac gacggtcgta agatacgcgc gcggcgaggt
      721 ttttccctct cggcgggctc gggccgttgc cgagagctgg aatcagccgg atccggaggc
      781 gtgccgatgc ctgcccttaa gatcattgcc acgacagttt tggtcagcgc gtgtgggacg
      841 gtcgggaccg cggtggtcgg tttcctgaac acggcccggc tcgagctatc tttcgacaag
      901 ctcaaggatt tcgatgtcct gaacgtcaat acctacaaca ccctcggaac atctttgaag
      961 ttcgacctcg agacatccga gccgatggag ctcttggtgt tctacaacga tgtcgacgag
     1021 gcgaagcggc tggtccgcaa gagcaccgtg tccctcaaga atttcaagtt gaacagccgg
     1081 gtccagggac atcttgtcga cgatgatctc cagaaaacga agtttaacgt cacgggatat
     1141 tacaacaccg agcggctggt cctttcgcac cgtggacctt tcggcggcct cggcatctac
     1201 gtcctggagc agaggcagct gaaggatgtc gactatccgg tcttctcggg cttcgtgatc
     1261 atggagaacc agctctccga gagcgcccga ggaacaagct tgacgcaatg cccttgcgtg
     1321 atggtgagcg cctcggcccc ggcaaaatac acgcaggtcg aagttgccga ggcgacatat
     1381 cccttcctga cgaagggatg ttcgcaaatc tccctgcccg acctctggca gggcgcctcc
     1441 gcctcggccc cctcccccgg ctgatcgtgc gaccgacgtc ccggagccgg cctgaaccat
     1501 gttgcagcga tgtggccccg gaacgccggc caacccaatc tgcttgatgc gctggagcgg
     1561 ctccactcac gtggcagcgg ctccagctgt taccctcacg cccgcactgt ctagaacggg
     1621 atgtcgtcgt cgaggtcgct ggcgaagcgc gagccgccgc tctcggccat ggccgggcgc
     1681 ttctccatcg gcgaggagcg gccgaactcg ccgcggctgc cgcggtcgtc gtcgcccatc
     1741 tcgccgccgc caccgccgcg gctgtcgagc agcgtgagtt caccgcggaa gcgctgcagc
     1801 accacctcgg tcgtgtattt ctcctgaccc
//
LOCUS       DATAIQ010000319         2542 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_108771, whole genome shotgun sequence.
ACCESSION   DATAIQ010000319 DATAIQ010000000
VERSION     DATAIQ010000319.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2542)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2542)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2542
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_108771"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..411)
                     /locus_tag="VHN20_05450"
     CDS             complement(<1..411)
                     /locus_tag="VHN20_05450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HEX2725245.1"
                     /translation="MTVHVQPVVRPDACPALVLNADYRPLSYYPLSIWCWQDAIKAVF
                     LDRVNIVSEYDKTVRSPSFEMRLPSVVSLKTYVKPSRHPAFTRFNVFLRDRFTCQYCG
                     DREDLTFDHLIPRSKGGHTTWENVVAACSPCNLRK"
     gene            complement(532..738)
                     /locus_tag="VHN20_05455"
     CDS             complement(532..738)
                     /locus_tag="VHN20_05455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725246.1"
                     /translation="MSVTASAGIAPAWTATRPTPATATPAPEAASADRPVEETTKPDE
                     TVAEAPAQPRKPPEGQGTRIDIRV"
     gene            complement(926..1807)
                     /locus_tag="VHN20_05460"
     CDS             complement(926..1807)
                     /locus_tag="VHN20_05460"
                     /EC_number="1.1.1.157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012453609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxybutyryl-CoA dehydrogenase"
                     /protein_id="HEX2725247.1"
                     /translation="MSIDIKTVGVIGAGQMGNGIAHVCACAGINVRLHDLSEDRINAA
                     LATINGNMARQIAKGTLTESDRQTALARIKPATTYEALADCDLVIEAATEKEDVKRKI
                     FQALCPALKPDAIIGTNTSSISITRLAAATDRPEKFIGIHFMNPVPLMELVELIRGIA
                     TAEPTFDSAKTFIDKLGKVTTVAEDFPAFIVNRILLPMINEAIYTLYEGVGSVEAIDT
                     AMRLGAHHPMGPLQLADFIGLDTCLSVMQVLHEGLADSKYRPCPLLVKYVEAGWLGRK
                     AKRGFYDYRGEKPVPTR"
     gene            complement(2028..>2542)
                     /locus_tag="VHN20_05465"
     CDS             complement(2028..>2542)
                     /locus_tag="VHN20_05465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018453240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HEX2725248.1"
                     /translation="TVRTAAFQATGEGGAAGVETASAADDPGVSSFKGEEIAKLERPE
                     LTSARIIISGGRSLGSAENFKKVIEPVADKLGAAVGASRAAVDAGYAPNDWQVGQTGK
                     VVAPDLYIAVGISGAIQHLAGMKDSKVIVAINKDEDAPIFQVADYGLVGDLFQVLPEL
                     ERELGKVQSG"
BASE COUNT          404 a          801 c          860 g          477 t
ORIGIN      
        1 cttgcgcagg ttgcacggcg agcaggcggc gacgacgttt tcccaggtcg tgtggccgcc
       61 cttggagcgc gggatcaggt ggtcgaaggt gaggtcctcg cggtcgccac aatactggca
      121 ggtgaagcgg tcgcggagga agacgttgaa ccgggtgaag gcggggtggc gggacggttt
      181 gacgtaggtc ttgagcgaga ccaccgaggg caggcgcatc tcgaagctcg gacttcgcac
      241 cgtcttgtcg tattccgaga cgatgttgac gcgatcgagg aacaccgcct tgatcgcgtc
      301 ctgccagcac cagatcgata ggggataata gctcagcggc cgataatcgg cgttcaagac
      361 cagcgctgga caggcgtcag gacgaacgac aggctgaacg tggaccgtca caccacctcc
      421 tccctgagga tgaagggcag aatcctcttt cgcctatcaa tctacaagct ctgtgacgga
      481 gttgtgaagg ttgcggcgca gcatcgatcg ccgcacccca cagccaatcg ctcagacccg
      541 gatgtcgatg cgggtcccct ggccttccgg cggctttcgc ggctgtgcgg gggcctcggc
      601 gaccgtctcg tccggcttcg tcgtctcctc gacggggcga tcggcggacg cggcttccgg
      661 ggccggcgtg gccgtggccg gcgtcggtct cgtggcggtc caggcggggg cgatgcccgc
      721 cgaagcagtg acgctcatgg aaacaggctc cgttctcgcc acgagcttag ccggggaggt
      781 cttgtcagcc ggtgagaccg attgctcgaa ttttacaggt tttggaggcc gttcattaag
      841 cgcctgcggc cggcctcatc gaggcatggc cgcccccatc cgggtgcctg cgcgcgcact
      901 ccccgcgacc cgagcggacg ccccgtcagc gcgtcggaac gggcttttcg ccgcggtagt
      961 cgtagaagcc gcgcttggcc ttgcgcccga gccatccggc ctcaacgtat ttcacgagca
     1021 gcggacacgg ccggtatttg gagtcggcga ggccctcgtg cagcacctgc atgactgaca
     1081 ggcaggtgtc gaggccgatg aagtcggcga gctggagcgg gcccatcgga tggtgcgccc
     1141 cgaggcgcat ggccgtgtcg atcgcttcga ccgagccgac gccttcgtaa agcgtgtaga
     1201 tggcctcgtt gatcatcggc agcaggatgc ggttgacgat gaaggccggg aaatcctcgg
     1261 ccaccgtcgt gaccttgccg agcttgtcga tgaaggtctt ggcggagtcg aaggtcggct
     1321 ccgccgtcgc gatgccgcgg atgagctcga ccaactccat caggggcacc gggttcatga
     1381 aatggatgcc gatgaacttt tccggacggt cggtcgcggc cgcgaggcgc gtgatcgaga
     1441 tcgacgaggt gttcgttccg atgatcgcgt cgggcttcag cgccgggcag agggcctgga
     1501 agatcttgcg tttcacatcc tccttctcgg tcgcggcctc gatcacgagg tcgcagtcgg
     1561 cgagggcctc gtaggtggtc gccggtttga tgcgcgcaag cgccgtctgg cggtcgcttt
     1621 cggtgagggt gcccttggca atctggcggg ccatgttgcc gttgatggtg gcgagggcgg
     1681 cattgatgcg gtcctcgctg agatcgtgca ggcgtacgtt gatccccgcg caggcgcaga
     1741 catgggcaat gccgttgccc atctgcccgg cgccgatcac gcccacggtc ttgatgtcaa
     1801 tgctcataga gcgtgccccg cgtcgttccg gtcatgcctt tcgagcgggc gcttcggcga
     1861 agcgatcccg cccactccgt ttcccttgca tgatctttcg gcaaagcggc gcccgctttg
     1921 ccggatcacg cttggagcgg catcgctcct gaaagcgatc ccgctccgtt ccgattgtgc
     1981 cgcatgatcc tttcggcaaa gcgggtgccc actttgccgg atcatgctca gcccgactgc
     2041 accttgccga gctcgcgctc gagttcgggc agaacctgaa agagatcgcc gaccaggccg
     2101 taatcggcga cctggaagat cggcgcgtcc tcgtccttgt tgatcgcaac gatcaccttg
     2161 gaatccttca taccggcgag atgctgaatc gcgcctgaaa ttcccacggc gatgtaaagg
     2221 tcaggggcca cgaccttgcc ggtctggccg acctgccagt cgttcggcgc atagccggca
     2281 tcgaccgcgg cccgcgacgc gccgacggcg gcgccgagct tgtcggccac gggctcgatc
     2341 accttcttga agttttccgc cgagccgagc gagcgcccgc ccgagatgat gatgcgcgcg
     2401 gacgtaagct cgggccgctc gagcttggcg atttcctcgc ccttgaagga ggacacgccc
     2461 ggatcgtcgg cagcggatgc ggtttcgacc cccgccgcgc ccccctcccc cgtcgcctgg
     2521 aaggccgcgg tgcgcacggt ga
//
LOCUS       DATAIQ010000320         1511 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_293828, whole genome shotgun sequence.
ACCESSION   DATAIQ010000320 DATAIQ010000000
VERSION     DATAIQ010000320.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1511)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1511)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1511
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_293828"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            190..690
                     /locus_tag="VHN20_05470"
     CDS             190..690
                     /locus_tag="VHN20_05470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725249.1"
                     /translation="MPCRVAFAFGAAFLAVMAAAPAAVAQFASPQALIEDIYKKRYRT
                     KNSPGIDLAKKSEVVRYFEPALADALDKDGRGDQEPLLNGAPFTNAQDRYFSALKIEM
                     GPSTERSAAATVSFLREGDRKRTVLRYDMVRDAKGWRIRDIVESGGNAPVEHGGSLRN
                     LLKVKR"
     gene            714..1187
                     /locus_tag="VHN20_05475"
     CDS             714..1187
                     /locus_tag="VHN20_05475"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX2725250.1"
                     /translation="MELRLEAPDSAAAQWCLEQYFAELSARFDGGFDPARSISASADE
                     MTPPAGFFALALLEGAPAGCGVLKVAGGGTGEIKRMWTAPHARGLGVARQVLRWLETR
                     AREARPRPAASRNQPRADGGAGPLSVGRIPGGGSVQRGALCAPLVREAAVSRVPA"
     gene            complement(1190..>1511)
                     /locus_tag="VHN20_05480"
     CDS             complement(1190..>1511)
                     /locus_tag="VHN20_05480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007595949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HEX2725251.1"
                     /translation="FKPTVADIVENPKRLKFIEIDAAQTPRSLDDVDAAAVNTNYATP
                     AGLKPQDAILREDPKGPYVNVIAVREQDKDKPWVKSLVEAYHSPEVKAFINDKFGGTV
                     LAGW"
BASE COUNT          228 a          521 c          515 g          247 t
ORIGIN      
        1 cgtcgccatc acgcgatcct ccgatcggca gcccttgtag ccgaaccgcg ccgtccgcgc
       61 ggcacatctc gattccgcga gcaccctccg cgaacgccat cgacaaactg cgtctccggg
      121 tcgagattgt gcggacttcg gcgtgacgcc ggggtctgtc ggtgccgcga ttgccggaag
      181 gaggcgacga tgccgtgccg cgtcgcattc gcgttcgggg cagcgttcct tgcggtcatg
      241 gcggccgcgc cggcggccgt cgcccagttc gcatcgccgc aggcgctcat cgaggacatc
      301 tacaagaagc gataccgcac gaaaaactcg cccggcatcg acctcgccaa gaaatccgaa
      361 gtggtccgct atttcgagcc ggcgcttgcc gatgcgctcg acaaggatgg ccgcggcgac
      421 caggaaccgc tcctcaacgg cgctcccttc accaacgcgc aggaccgcta tttctcggcg
      481 ctgaagattg agatgggccc gtccaccgaa cgctcggccg cggcgaccgt gtccttcctg
      541 cgcgagggcg accgcaagcg cacggtgctg cgctacgaca tggtcaggga tgcaaagggc
      601 tggcgcatcc gcgacatcgt cgagagcggc ggcaacgccc cggtcgagca cggcggctcg
      661 ctgcgcaatc tgctcaaggt caagcgctga ggcgaccgat gcccgcttgc gccgtggagc
      721 tgcgcctcga ggcaccggac agcgcggccg cgcagtggtg ccttgagcaa tacttcgccg
      781 agctttccgc gcgcttcgat ggcggtttcg atccggcccg gagcatctcc gcgagcgcgg
      841 acgagatgac gccgccggcc gggttcttcg cgctcgcctt gctcgagggc gcgccagccg
      901 gctgcggcgt gctgaaggtc gcgggcggcg ggaccggcga gatcaagcgc atgtggaccg
      961 cgccccacgc acgcggcttg ggcgtcgcgc gccaggtgct gcgctggctc gagacacggg
     1021 cgcgcgaggc ccggcctcgc ccggctgcgt ctcgaaacca accgcgcgct gacggaggcg
     1081 caggccctct atcggtcgga aggataccgg gaggtggctc cgttcaacgc ggagccctat
     1141 gcgcaccatt ggttcgagaa gcggctgtga gccgcgtgcc cgcctgacgt caccagccgg
     1201 cgagcaccgt cccgccgaat ttgtcgttga tgaaggcctt cacctccggc gagtggtagg
     1261 cctcgacgag cgacttgacc caaggcttgt ccttgtcctg ctcgcggacc gcgatcacgt
     1321 tgacgtaggg ccccttcggg tcctcgcgca ggatcgcgtc ctggggcttg agacctgccg
     1381 gcgtggcgta gttcgtgttc accgccgccg cgtccacgtc gtcgagcgaa cgcggcgtct
     1441 gcgcggcgtc gatctcgatg aacttgagcc gtttcggatt ctcgacgatg tcggcgaccg
     1501 tcggcttgaa g
//
LOCUS       DATAIQ010000321         2852 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_385643, whole genome shotgun sequence.
ACCESSION   DATAIQ010000321 DATAIQ010000000
VERSION     DATAIQ010000321.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2852)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2852)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2852
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_385643"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            40..1089
                     /locus_tag="VHN20_05485"
     CDS             40..1089
                     /locus_tag="VHN20_05485"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEX2725252.1"
                     /translation="MTSRIRFLSLLACALLSPFAARADGVADFYKGKQINLVVGYGPG
                     GGYDVYARIVARHLTRQIPGNPTVVVQNMPGAGSLRAANYLYNAAPKDGTVIGTFARN
                     MALLGVLGSNANVQFDPRKFTWLGSSSSYENDAYLLFVHKDAPVKSIEDARKPGGPPI
                     VLGGTADGTSGNDVAMVQRDALGLNLKMITGYPDSNALFLAVDRKEIDGRNVGISAVN
                     SSKAEWLGPNSNVRVLMQFARRTRHPRFPDVPTARELARSAADRALIELAEMPYLLSR
                     PFVAPPGLPADRAKALQAAFLATHRDPDFLADADKLKIDVSPIGAERVVELITQIASA
                     PPDQLKYIEKLISEN"
     gene            1351..1920
                     /locus_tag="VHN20_05490"
     CDS             1351..1920
                     /locus_tag="VHN20_05490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012334641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725253.1"
                     /translation="MIAAWPTRAEAFLGDFIRALTGLGDRSVRAPPRARYHPAPRRIR
                     AAAVPGSHVGRANPPVTRRAARIARLRPQLPETVTAKDVKDPDRRPNPLIALLHDPTL
                     RKGDIVMFPDGPRVFRGRPGARHAMSDFAAISRSDNVARATRNALAVMPVGENNAWLA
                     AAAAGKQEVAGVPDVATTGSVSGKPRSAP"
     gene            complement(2031..2237)
                     /locus_tag="VHN20_05495"
     CDS             complement(2031..2237)
                     /locus_tag="VHN20_05495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010687024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725254.1"
                     /translation="MSGFRITFSRVVMGVPFPVACVTIRHAWDSERAVRAAELRLMRR
                     TAGLDDWRHLADRVDVEPCRDVAS"
     gene            2474..2716
                     /locus_tag="VHN20_05500"
     CDS             2474..2716
                     /locus_tag="VHN20_05500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725255.1"
                     /translation="MFHKRLLALAAVSIVAGAAMTDAALAAPRGKHRSWQVDPLYGTA
                     RYIPDGYDDVCVVNRKIVYDPYIGDYVVKKFRRCYY"
BASE COUNT          493 a          989 c          904 g          466 t
ORIGIN      
        1 tgccgaggag caattcgccg agcacgaaac ggaggaaaca tgacctcgag aatccggttt
       61 ctgagtctcc ttgcttgcgc gctgctgagc cccttcgccg cgcgggctga tggagtcgca
      121 gacttctaca agggcaagca gatcaacctg gtcgtcggat atgggccggg aggcggctat
      181 gacgtttatg cgcgtatcgt cgcccggcac ctcacccggc agatcccggg caaccccacg
      241 gtcgtcgtcc agaacatgcc gggcgcgggg agcttgcgtg ccgccaatta cctctacaac
      301 gctgctccga aagacggcac cgtcatcggc accttcgccc gcaacatggc gctgttgggc
      361 gtcctcggct cgaacgcgaa cgtccagttc gacccgcgga agttcacctg gctcggctcg
      421 tcctcgagct acgagaacga tgcctatctt ctcttcgtgc acaaggatgc gccggtgaag
      481 tcgatcgagg acgcccgaaa accgggcggt ccgccgatcg tcctgggcgg aaccgccgac
      541 ggaacgtcgg gcaacgacgt cgccatggtt cagcgcgacg cgcttggcct caacctcaag
      601 atgatcaccg gctatccgga cagcaacgcg ctcttcctgg ccgtggaccg caaggagatc
      661 gacgggcgca acgtcggcat ctcggcggtc aactcgtcga aagcggagtg gctgggcccg
      721 aacagcaacg tgcgggtgct gatgcagttt gcgcgcagga cccggcaccc ccggttcccg
      781 gatgttccga ccgcgcgcga gctggcgcgc agcgcggctg atcgcgccct catcgagctt
      841 gcggagatgc cttacctgct gtcgcgcccg ttcgtggccc cgccggggct gccggccgac
      901 cgggccaagg cgctccaggc ggcatttctc gcgacgcacc gcgacccgga cttccttgcc
      961 gatgcggaca agctcaagat cgacgtgagc ccgatcggcg ccgagcgcgt cgtggagctg
     1021 atcacgcaga tcgccagcgc gccacccgac cagttgaaat acatcgagaa gctgatctcg
     1081 gagaactgac tgagatcggg ttcgacccct ccggcgcctg tccggctccg tcgcccggcg
     1141 ggatgcgatg acgagcaatt gatgcggatc aattccggct tcggcaaggg tccatagtct
     1201 ccgagccgca tatcggctat gttgacgggc ggtgcgtcct gctctcgcgc gggggtcaca
     1261 atgcaggcgt tcggcgaggt tgctccagct gctgcgcggg accatcggcg agggtggatc
     1321 ggcattgccg cggccgcggt ctgcgcttgc atgatcgccg catggccgac ccgggccgag
     1381 gctttcctgg gagatttcat cagggcgctg acgggcttgg gcgatcgctc tgtgcgcgcg
     1441 cctccgagag cccgctacca ccccgctccg cggcgcattc gcgccgccgc cgtgcccggc
     1501 agccatgtcg gccgggcgaa cccgcctgtc acccgtcgtg cggcccgcat cgcgcggctt
     1561 cgccctcagc tccccgagac cgtcacggcg aaagacgtga aggatccgga ccggcggccc
     1621 aatccgctca tcgcgcttct tcacgacccg accctgcgca agggcgacat cgtcatgttc
     1681 cccgacggcc cgcgtgtttt ccgcggccga cccggggcac ggcacgcaat gagcgacttt
     1741 gcggccatat cccgcagcga caacgttgcg agggccacgc gcaacgcgct tgccgtcatg
     1801 ccggttggag agaataacgc ctggctcgcc gcggccgcag cgggcaagca agaggtggcg
     1861 ggcgtccccg acgtcgccac aaccggctcc gtcagcggca agccgcgatc ggcgccatga
     1921 cgtctcgcgc cggacctctt ggccgaccgg acaggggccc catcaagtag aaaggcgacg
     1981 gccgcatgtg agcgcgtcgc cgcaacgccc cggaccgcgt ctgccggcga tcacgatgcg
     2041 acgtcgcggc aaggttcgac gtcgacgcga tcggcgaggt gacgccaatc gtcgagccct
     2101 gccgtgcgtc tcatgagccg cagctccgcc gcacggacgg cgcgttcgga gtcccaggcg
     2161 tgccggatcg tcacgcacgc aaccgggaac ggaacaccca tgacgacccg cgaaaaggtg
     2221 atgcgaaaac cgctcatcgc gaccctcccg agcacgtgct gattgtgcag ctgttttcat
     2281 gacccggcaa gatgctcgcc gggacgctgc gacagcgcct ttccggcgcc gctcccgatt
     2341 tgagctgagc tttcctgtcg tcgcgcgcgt gtgccggcac acgatggcaa tgctggcgcg
     2401 cagctatact cgattcgtct tcaaagaaga caatccagac cacagcacag catgacgaca
     2461 ggagaacatc accatgttcc acaagcgcct tcttgcactc gccgccgtgt ccatcgttgc
     2521 gggcgcggcc atgaccgacg cagcgctcgc cgccccgcgc gggaaacacc gctcctggca
     2581 ggtcgaccct ctctacggca cggcgcgcta catccccgac ggctacgacg acgtctgcgt
     2641 cgtgaaccgc aagatcgtct acgatcctta catcggcgac tacgtcgtga agaagttccg
     2701 gcgctgctac tattgatgcg tcgccctcct cgaatgcgtc cgagtccaca cctgcaaagc
     2761 gatgacattt ccggtaatga ggacatgtcc gtgctgcccc aggtgtcgcc cgtcaccgac
     2821 ctgatggcag gagaggcctt gccatcaggt cg
//
LOCUS       DATAIQ010000322         2081 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_385672, whole genome shotgun sequence.
ACCESSION   DATAIQ010000322 DATAIQ010000000
VERSION     DATAIQ010000322.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2081)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2081)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2081
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_385672"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..181
                     /locus_tag="VHN20_05505"
     CDS             <1..181
                     /locus_tag="VHN20_05505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014495086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF3597 domain-containing protein"
                     /protein_id="HEX2725256.1"
                     /translation="DLMKLLDLDSSLAARKELAKELNYTGDMNDSAAMNIWLHKQVMV
                     KLAASGGKVPDDLRT"
     gene            complement(463..>2081)
                     /gene="glgX"
                     /locus_tag="VHN20_05510"
     CDS             complement(463..>2081)
                     /gene="glgX"
                     /locus_tag="VHN20_05510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018259507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004133 - glycogen debranching enzyme
                     activity [Evidence IEA];
                     GO_process: GO:0005980 - glycogen catabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycogen debranching protein GlgX"
                     /protein_id="HEX2725257.1"
                     /translation="AISHLVDLGVTAVELLPVHQHANDRHLIERGLTNYWGYNTLAFF
                     APARRYAANKQFAFAEFKEMVAHLHAAGLEVVLDVVYNHTAEGNERGPTLSYKGIDNA
                     SYYRLAPERRYYINDTGTGNTVNLSNSRVLQMVTDSLRYWAQEMHVDGFRFDLATILG
                     REPHGFDEDGRFLDACRQDPVLSQVKLIAEPWDCGPGGYQVGRFSPGWAEWNDRFRDT
                     VRAYWKGEEGKLPELAARLTASADFFNKRGRRPWASVNFITAHDGFTLNDLVSYNDKH
                     NEANGEDNRDGHSHNLSYNYGAEGPTDDADIRAVRFRQMRNLLATLLLARGTPMLLAG
                     DEFARSQGGNNNAYAQDNEISWLDWESIGDDARALTQFVRKLLTIRAALPMLRRGRFL
                     TGAYDEELGVKDVTWLTPSGDEMTPEHWGDAHARAMGVLLDGRAQETGIRRVGTDATL
                     LLVLNAHHDVVRFKLPEAVGGSQWMRLIDTNTDQTDAPGFAFGHEYEVTGRSLLLFIL
                     QPASDGTHVAAERSFRHVIEAVQSASTPQA"
BASE COUNT          340 a          659 c          704 g          378 t
ORIGIN      
        1 cgacctgatg aagctgctcg atctcgacag cagccttgcc gcccgcaagg aactcgccaa
       61 ggagctgaac tataccggcg acatgaacga ctccgccgcc atgaacatct ggctgcacaa
      121 gcaggtcatg gtgaagctcg cggccagcgg agggaaggtt cccgacgatc tcaggacgta
      181 acggcggcga tccgaaaaag gcttgtcccg gacgagatcc gggatcatgc ggctcagtaa
      241 gagatagcgc gggatcgatt caactttaat tgatcccgcg ctagagcatg atccggcgaa
      301 agcttgctcc gggcatgatc cgggtggcac tccttcgccg acgaaggctc gtcccggact
      361 cgatccggga tcatgcggca taaagcgaac agagcgctcg atttagtctg aagcaatcct
      421 gctctcggcc gcgattccag catcgcggtc cgttgcctcg ggtcatgctt gcggcgtgct
      481 tgccgactgg accgcttcga tcacgtgccg gaaggaccgc tcggcggcga cgtgcgtccc
      541 gtccgacgca ggctgcagga tgaacagcag cagcgagcgt ccggtcacct cgtattcgtg
      601 tccgaaagcg aagccgggcg cgtccgtctg atcggtgttg gtgtcgatca ggcgcatcca
      661 ttggctgccc ccgacggcct cgggcagctt gaagcgcacg acatcgtggt gggcgttgag
      721 cacgagcagc agcgtcgcgt cggtgccgac gcgccggatc ccggtttcct gcgcgcggcc
      781 gtcgaggagc acgcccatgg cgcgcgcatg cgcgtcgccc caatgctccg gcgtcatctc
      841 gtcgccgctc ggcgtcagcc acgtgacgtc cttgacgccg agctcctcgt cgtaggcgcc
      901 ggtgagaaag cggccgcggc gcagcatcgg caacgcggcg cggatggtga gcagcttgcg
      961 cacgaactgc gtcagcgcgc gggcatcgtc gccgatgctt tcccagtcga gccaggagat
     1021 ttcgttgtcc tgcgcgtagg cattgttgtt gccgccttgg ctccgcgcga actcgtcgcc
     1081 cgccagcagc atcggcgtgc cgcgcgccag cagcagcgtc gccagcagat tgcgcatctg
     1141 gcggaagcgc acggcccgga tgtcggcatc gtcggtcggg ccttcggccc cgtaattgta
     1201 ggacaggttg tgcgaatggc cgtcgcggtt gtcttcgccg ttggcctcgt tgtgcttgtc
     1261 gttgtacgag acgaggtcgt tgagcgtgaa gccgtcatgg gcggtgatga agttgaccga
     1321 tgcccacggc ctgcggccgc gcttgttgaa gaaatcggcc gatgcggtca ggcgcgcggc
     1381 gagttcgggg agcttgccct cctcgccctt ccagtaggca cgcacggtat ccctgaagcg
     1441 gtcgttccac tccgcccatc ccggcgagaa gcggccgacc tggtagccgc cgggcccgca
     1501 atcccacggc tcggcgatca gcttgacctg gctcagcacc ggatcctggc ggcaggcgtc
     1561 gaggaagcgc ccgtcctcgt cgaagccgtg cggttcgcgc ccgaggatgg tggcgaggtc
     1621 gaagcggaaa ccgtcgacgt gcatctcctg cgcccagtag cgcaggctgt cggtcaccat
     1681 ctgcagcacc cgcgaattgc tcaggttgac cgtgtttccg gtgccggtat cattgatgta
     1741 gtagcgccgc tccggcgcca gccggtaata cgaggcgttg tcgatgccct tgtaggacag
     1801 cgtcggcccg cgctcgttgc cttcggcggt gtggttgtag acgacgtcga ggaccacctc
     1861 gaggccggcg gcgtgcaggt gcgccaccat ctccttgaac tcggcgaagg cgaattgctt
     1921 gttggccgcg tagcgccgcg ccggcgcgaa gaacgccagc gtgttgtagc cccagtagtt
     1981 cgtcaggccg cgctcgatca ggtgtcgatc gttcgcgtgt tgatgaacgg gcagcaactc
     2041 gaccgccgtg acgccgagat cgacgaggtg cgagatggcg g
//
LOCUS       DATAIQ010000323         1842 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_16839, whole genome shotgun sequence.
ACCESSION   DATAIQ010000323 DATAIQ010000000
VERSION     DATAIQ010000323.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1842)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1842)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1842
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_16839"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1842
                     /locus_tag="VHN20_05515"
     CDS             <1..>1842
                     /locus_tag="VHN20_05515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018261278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEX2725258.1"
                     /translation="QRFVTGAGRYTDDFNRPGQAYAYFLRSPHAHANIRAIDTAPARA
                     MAGVIAVLTGEDLAADKIGNLICGWMIHSKDGSPMKAGPHPALAQGKVRYVGDHVAVV
                     IAETLTQAKDAAEAIAVDYDVLPAVVSAAEAQRSGAQVHEVAPDNTVYRWHLGDRAAT
                     DQAFARAKHVTRLDITNNRLVPNPIEPRAAIGEYDRGTDSLTLYTTSQNPHVARLVLS
                     AFVGIAPEHKLRVIAPDVGGGFGSKIFIYAEETVCLWAARKVGRPVKWTSDRNEAFLA
                     DAHGRDHVTHAEMAMDENGRILGLRVSTIANLGAYLSTFASSVPTYLYAPLLSGQYDI
                     PAIYCEVDGVYTNTAPVDAYRGAGRPEATFVIERLVEVAARQLGVDPATFRKRNYIGK
                     FPHQTPVIMTYDAGDYQASLAKALELADYAGFGRRKRESERRGRLRGIGFSSYIEACG
                     IAPSQAVGSLGAGVGLWESAEVRVNPTGSVEILTGSHAHGQGHETTFAQLVSDRLGIP
                     IEQVNVLHGDTDKVQFGMGTYGSRSGAVGMSAIAKALDKVIAKGRKVAAHVLEASEGD
                     IEFKDGKFSVAGTDKSVAFGDIALQAYIAHKFSGQELEPGLKEGSFYD"
BASE COUNT          307 a          653 c          617 g          265 t
ORIGIN      
        1 cagcgcttcg tcaccggcgc gggccgctac accgacgatt tcaaccgtcc cggccaggcc
       61 tatgcctatt tcctgcgctc gccgcacgcg catgccaaca tccgcgccat cgacacggcg
      121 ccggcgcgcg ccatggcggg cgtgatcgcc gtcctcaccg gcgaggatct cgccgccgac
      181 aagatcggca acctgatctg cggctggatg atccactcga aggacggctc gccgatgaag
      241 gccgggccgc acccggcgct cgcccagggc aaggtgcgct acgttggcga ccacgtcgcc
      301 gtcgtgatcg ccgagacgct cacgcaggcg aaggacgcgg cggaagcgat cgcggtcgat
      361 tacgacgtgc tgccggcagt cgtgagcgcc gcggaggcgc agcgctcggg cgcgcaggtg
      421 cacgaggtcg cgccggacaa cacggtgtac cgctggcacc tcggcgacag ggcggccacc
      481 gaccaggcct tcgcccgggc gaagcacgtc accaggctcg acatcaccaa caaccgcctc
      541 gtccccaacc cgatcgagcc gcgcgcggcg atcggcgaat acgaccgcgg caccgacagc
      601 ctgacgcttt acaccacgag ccagaacccg catgtcgcgc ggcttgtgct ctcggccttc
      661 gtcggcatcg cgcccgagca caagctgcgc gtgatcgcac cggatgtcgg cggcggcttc
      721 ggctccaaga tcttcatcta tgccgaagag acggtctgcc tgtgggccgc caggaaggtc
      781 gggcggccgg tcaagtggac cagcgaccgc aacgaggcct tcctcgccga cgcgcatggc
      841 cgcgaccatg tcacccacgc cgaaatggcg atggacgaga acggccgcat cctgggcttg
      901 cgcgtctcga cgatcgccaa tctcggcgcc tatctgtcga ccttcgcgtc ctcggtcccg
      961 acctaccttt acgcgccgct gctgtcgggc cagtacgaca ttccggcgat ctattgcgag
     1021 gtcgacggcg tctacaccaa cacggcgcca gtcgacgcat atcgcggcgc cggccggccg
     1081 gaagcgacgt tcgtcatcga gcggctcgtc gaggtggcgg cgcggcaact cggcgtcgat
     1141 ccggcgacgt tccgcaagcg caactacatc ggcaagttcc cgcaccagac gccggtgatc
     1201 atgacctacg acgctggcga ctatcaggcc tccctcgcca aggcgctgga gctggcggac
     1261 tatgccgggt tcggccgtcg caagcgcgag agcgagcgcc gcggcaggct gcgcggcatc
     1321 ggcttctcct cctacatcga ggcctgcggc atcgcgccga gccaggccgt cggctcgctc
     1381 ggggcgggcg tcggcctgtg ggaatcggcg gaggtgcgcg tcaacccgac cgggtcggtc
     1441 gagatcctca ccggctcgca tgcccacggc cagggccacg agacgacctt cgcccagctg
     1501 gtctcggacc ggctgggcat cccgatcgag caggtgaacg tgctgcacgg cgacaccgac
     1561 aaggtgcagt tcggcatggg cacctacggc tcgcggtccg gcgcggtggg catgtccgcg
     1621 atcgccaagg cgctcgacaa ggtcatcgcc aaaggcagga aggttgccgc ccacgtgctc
     1681 gaggcgtctg agggcgacat cgagttcaag gacggcaagt tctcggtcgc cggcaccgac
     1741 aagtcggtcg ccttcggcga catcgcgctg caggcctaca tcgcgcacaa gttctcgggc
     1801 caggagctcg agccggggct gaaggagggg tcgttctacg ac
//
LOCUS       DATAIQ010000324         2115 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_109237, whole genome shotgun sequence.
ACCESSION   DATAIQ010000324 DATAIQ010000000
VERSION     DATAIQ010000324.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2115)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2115)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2115
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_109237"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            6..635
                     /locus_tag="VHN20_05520"
     CDS             6..635
                     /locus_tag="VHN20_05520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019903083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase family protein"
                     /protein_id="HEX2725259.1"
                     /translation="MVAQLRACRVCRDAPQHGPALPQEPRPIIQASATARLCIASQAP
                     GTRAHAAGKSFYDPSGVRLRDWLGLDEATFYDESRVAIVPMGSCFPGHDTKGGDLPPR
                     RECAQLWREQIFAALPELELILVIGQYAQAWHLGDDFRDGLTATVKRWRDILESPRRP
                     RILPMPHPSWRNNGWLRKNPWFEAELLPVLRRQVQAILTPAAPKKEKRR"
     gene            632..1423
                     /locus_tag="VHN20_05525"
     CDS             632..1423
                     /locus_tag="VHN20_05525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015931972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEX2725260.1"
                     /translation="MTLSTLRVSKAGAVATITLSRPDKLNALNSALHADLRVALDEAG
                     NDTAIRVVVLTGEGRGFSSGADLTEGLPRDVHGQVDLATPLARDYNPLVRRLVAYPKV
                     TIAALNGPAVGASMNIALACDIVVAARSAYLQEGFVKIGLIPDAGGTWLLPRLVGPKR
                     ALALMMTADQIPADEAERLGLVYKVFEDASFAADTAALAARLAEGPGLAYQLLKRAVA
                     TSLESSLDAQLDVEAELQQKAGVSNDFAEAIAAFRDKRPPRFEGK"
     gene            1462..1668
                     /locus_tag="VHN20_05530"
     CDS             1462..1668
                     /locus_tag="VHN20_05530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725261.1"
                     /translation="MRTNYLLLGLITVTMVVGLYMSNNPDQADKLATMREQAGLTGDT
                     RETVMTLLAVGLAVFIGYLAITRR"
     gene            complement(1762..>2115)
                     /locus_tag="VHN20_05535"
     CDS             complement(1762..>2115)
                     /locus_tag="VHN20_05535"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012495506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX2725262.1"
                     /translation="KMINQICIAGLVQGLAEGIHFGKKAGVDVEAVLDVISKGAAQSW
                     QMENRGKTMNQGKFDFGFAVDWMRKDLSICLAEARRNGANLPVTALVDQFYSEVQKMG
                     GKRWDTSSLLARLER"
BASE COUNT          335 a          743 c          699 g          338 t
ORIGIN      
        1 acgagctggt cgcgcaattg cgcgcctgcc gggtgtgccg cgatgcgccg cagcacggcc
       61 cggcattgcc gcaggagccg cggccgatca tccaggcgag cgcgacggcc cgcctgtgca
      121 tcgccagcca ggcgcccggg acgcgcgccc acgccgccgg caagtccttc tacgacccgt
      181 ccggggtcag gctgcgcgac tggctcggcc tcgacgaggc gaccttctat gatgaaagcc
      241 gggtcgccat cgttccgatg ggctcgtgtt tcccgggcca tgacaccaag ggcggcgacc
      301 tcccgccgcg gcgcgaatgc gcgcagcttt ggcgggagca aatcttcgcg gcgctgccgg
      361 agctcgagct gatcctggtg atcggccaat acgcccaggc ctggcatctc ggcgacgatt
      421 tccgcgacgg cctgacggcg acggtgaaac gctggcgcga tatcctcgag agcccgcgcc
      481 gcccgcgcat cctgccgatg ccgcatccgt cctggcgcaa caacggctgg ctgcgcaaga
      541 acccctggtt cgaggccgag ctgctgcccg tcctgcgcag gcaggtgcag gcgatcctga
      601 cgccggcagc acccaagaag gagaaacgcc gatgaccttg tcaaccctgc gtgtgtcgaa
      661 ggccggcgcg gtcgccacca tcaccttgtc gcggcccgac aagctcaatg cgctgaacag
      721 cgcgctgcat gcggacctgc gcgtcgcgtt ggacgaggcc ggaaacgaca cggccatccg
      781 cgtcgtggtc ctgacggggg aggggcgggg gttctcgtcc ggcgccgatc tcaccgaagg
      841 tctgccgcgc gacgtccacg gccaggtcga cctcgccacg ccgctggcgc gggactacaa
      901 cccgctcgtc cgccgtctcg tcgcctatcc caaggtgacc atcgcggcgc tcaacgggcc
      961 ggcggtcggc gcgtccatga acatcgcgct ggcttgcgac atcgtcgtgg cggcgcgctc
     1021 tgcgtatctg caggaagggt tcgtcaagat cggcctgatc cccgacgccg gcggcacgtg
     1081 gctcctgccc cgcctcgtcg gcccgaagcg ggcgctggcg ctgatgatga ccgccgacca
     1141 gattccggct gacgaggccg agcgcctcgg cctcgtctac aaggttttcg aggacgcgtc
     1201 ctttgccgcc gacaccgccg cgctcgccgc gcgtctcgcc gaggggcccg ggcttgccta
     1261 tcagctgctc aagcgcgccg tggcgacgag cctggagagc agcctcgacg cgcagctgga
     1321 cgtcgaggcc gagctgcagc aaaaggccgg cgtgagcaat gatttcgcgg aggcgatcgc
     1381 cgccttccgc gacaagcgcc cgccgcgctt cgagggcaag tgacggcctt gcggcacaca
     1441 agcggagcac gcgatccccc catgcgcacc aattacctgc ttctcggcct catcacggtc
     1501 accatggtgg tcggccttta catgtccaac aatcccgacc aggccgacaa gctcgccacc
     1561 atgcgggagc aggcggggct gacgggcgac acgcgcgaga ccgtcatgac gctcctggcg
     1621 gtcggcctcg ccgtcttcat cggctatctc gccatcacgc ggcgctgaag caggatcgcc
     1681 ccggatcgag cgatcctact cgagctttcg ttgatgccgc atgatcttat tcggcgaagt
     1741 ggccggctaa tgccatgagg gtcagcgctc gagccgcgcg agcaggctgg acgtgtccca
     1801 gcgcttgccg cccatcttct gcacctcgga atagaactgg tcgacgagag cggtgaccgg
     1861 aaggttggcg ccgttgcggc gcgcctcggc gaggcagatc gacagatcct tgcgcatcca
     1921 gtcgacggcg aagccgaaat cgaacttgcc ctggttcatg gtcttgccgc gattctccat
     1981 ctgccaggac tgcgcggcgc ctttcgagat cacgtcgagc acggcctcga cgtcgacgcc
     2041 cgctttcttg ccgaaatgga tgccttcggc gaggccctgg acgaggccgg caatgcagat
     2101 ctggttgatc atctt
//
LOCUS       DATAIQ010000325         2274 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_53869, whole genome shotgun sequence.
ACCESSION   DATAIQ010000325 DATAIQ010000000
VERSION     DATAIQ010000325.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2274)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2274)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2274
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_53869"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1223)
                     /locus_tag="VHN20_05540"
     CDS             complement(<1..1223)
                     /locus_tag="VHN20_05540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002717045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX2725263.1"
                     /translation="MSASAFLTQPGNPFSRFARWLAGLMPKGLYARSLIIIIAPVVLL
                     QSVIAYVFMERHWQLVTRRLSSAVTADIAALIDIYETYPQDKDGETLGRIAGDRLALD
                     VDILKDAELPPPGPKPFFSILDEALSDEIRRQIARPYWTDTVGRSNFIEIRVKLKDGV
                     MRVIARRSQAYASNSHIFLLWMGGSSLVLLGIAILFLRNQIRPILRLAEVAEGFGKGR
                     DIEFRPRGAREVRQAGHAFIEMKERIERAMEQRTAMLNGVSHDLRTILTRFKLSLALV
                     EQTAEVEALKKDIDEMSRMLEGYLAFARGDAGEQAVTTDLRTLLSELQSDAERQGDTA
                     SVDIVGDPMVTVRQDAFRRLLFNLVSNAARHGTNIAIRARHDGDGLVVHVDDDGPGIP
                     PEAREDVFKPFVRLD"
     gene            complement(1223..1942)
                     /locus_tag="VHN20_05545"
     CDS             complement(1223..1942)
                     /locus_tag="VHN20_05545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020094318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX2725264.1"
                     /translation="MTQPARVEIPDHAPHILVVDDDRRLRELLARFLTQNGFRVTTAA
                     SAAEAQAKTGSLVFDALVLDVMMPGENGFDYARRVRAESQVPILMLTARANPADRVTG
                     LEIGCDDYLAKPFETRELILRLSNILKRAQPVERVEPQGSPEAIHFGPFVYRFDRGEL
                     RRDDEVLRITDREREILNILGQKAGGNVAREELAGASGANERTVDVQITRLRKKIEVD
                     PANPVFLQTVRGIGYRLVVDQ"
     gene            complement(1939..>2274)
                     /locus_tag="VHN20_05550"
     CDS             complement(1939..>2274)
                     /locus_tag="VHN20_05550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEX2725265.1"
                     /translation="QPGLTIAELLDILRITKQSLNRVLKELIEKGFVEQRPGTADRRQ
                     RLLFTTRAGHELAERLASLQTRRIMRALAEQDHDVKEAVTRFLLGMIDPGDRAHVERL
                     VFGAGGPRG"
BASE COUNT          333 a          739 c          837 g          365 t
ORIGIN      
        1 tcgtcgagcc gcacgaacgg cttgaacacg tcttcgcgcg cctcgggtgg gatgccgggg
       61 ccgtcgtcgt cgacatgcac gacgagcccg tcgccgtcgt gcctggcgcg gatggcgatg
      121 ttggtgccgt gccgcgcggc gttcgagacg agattgaaca ggagccgccg gaaggcgtcc
      181 tggcgcacgg tcaccatggg gtcgccgacg atgtcgacgg aggcggtatc gccctgccgc
      241 tcggcgtcgc tctgaagctc cgacagcagc gtgcgcaggt cggtggtgac cgcctgctcg
      301 ccggcgtcgc cgcgcgcgaa ggcgagatag ccctcgagca tgcggctcat ctcgtcgatg
      361 tccttcttga gcgcctcgac ctcggcggtc tgctcgacca gcgccagcga cagcttgaag
      421 cgcgtcagga tcgtgcgcag gtcgtggctg acgccgttga gcatggcggt gcgctgctcc
      481 atggcgcgct cgatgcgctc cttcatctcg atgaaggcgt ggccggcctg gcgcacctcg
      541 cgcgcgccgc gcggccggaa ctcgatgtcg cggcccttgc cgaagccctc ggcgacctcg
      601 gcgaggcgca ggatcgggcg gatctggttg cgcaggaaca ggatggcgat gccgagcagc
      661 accagcgacg agccgcccat ccacaagagg aagatgtgcg agttcgacgc gtaggcctgg
      721 ctgcgccgcg cgatcacgcg catgacgccg tccttgagct tgacgcggat ctcgatgaag
      781 ttggagcggc cgaccgtgtc ggtccagtag gggcgcgcga tctggcggcg gatctcgtcg
      841 gagagcgcct cgtcgaggat cgagaagaac ggtttcgggc cgggcggcgg cagctccgcg
      901 tccttgagga tgtcgacgtc gagcgcgagc cggtccccgg cgatgcgccc gagcgtctcg
      961 ccgtccttgt cctgcggata ggtctcgtag atgtcgatca gcgcggcgat gtcggcggtc
     1021 accgcggacg agaggcgacg cgtcacgagc tgccagtggc gctccatgaa cacgtaggcg
     1081 atcaccgact gcagcagcac gaccggcgcg atgatgatga tcagcgagcg cgcgtaaagg
     1141 cctttcggca tgaggccggc cagccatcgc gcgaaccgcg agaaggggtt tccaggctgc
     1201 gtgaggaacg ccgaggccga catcactggt cgacgacgag gcggtagccg atgccgcgca
     1261 cggtctggag aaagaccggg ttggccggat cgacctcgat cttcttgcgc aggcgcgtga
     1321 tctggacatc gaccgtgcgc tcgttggcgc cgctggcgcc cgccagctcc tcgcgcgcga
     1381 cgttgccgcc ggccttctgg cccaggatgt tcaggatctc gcgctcgcgg tcggtgatgc
     1441 gcagcacctc gtcgtcgcgg cgcagctcac cgcggtcgaa gcggtagacg aacggcccga
     1501 aatgaatcgc ctccggcgac ccctgcggct cgacgcgctc gaccggctgc gcgcgcttga
     1561 ggatgttcga gagccgcagg atcagctcgc gcgtctcgaa cggttttgcc aggtagtcgt
     1621 cgcagccgat ctcgaggccg gtcacgcggt cggccggatt cgcccgcgcc gtcagcatca
     1681 ggatcggcac ctgcgattcg gcgcgcacgc ggcgggcgta atcgaagccg ttctcgcccg
     1741 gcatcatcac gtcgagcacg agggcgtcga agaccaggct cccggtcttg gcctgcgcct
     1801 cggcggcgct ggcggcggtg gtgacgcgaa agccgttctg ggtcaggaag cgggccagca
     1861 gctcgcgcag gcggcggtcg tcgtcgacca cgaggatatg cggcgcgtgg tcggggatct
     1921 cgacgcgtgc cggctgggtc atccgcgagg tcccccggcg ccgaagacga ggcgctcgac
     1981 atgcgcccgg tcgcccggat cgatcatgcc gaggaggaag cgggtcaccg cctccttcac
     2041 gtcgtgatcc tgctcggcga gggcgcgcat gatgcgccgc gtctgcaggc tggcgaggcg
     2101 ctcggccagc tcatggcccg cgcgtgtggt gaaaaggagg cgctggcggc ggtcggcggt
     2161 tcccgggcgc tgctcgacga agcctttctc gatcagctcc ttgagcaccc ggttgaggct
     2221 ctgcttggtg atccggagga tgtccaggag ctcggcgatg gtcaggcccg gctg
//
LOCUS       DATAIQ010000326         3193 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_146575, whole genome shotgun sequence.
ACCESSION   DATAIQ010000326 DATAIQ010000000
VERSION     DATAIQ010000326.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3193)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3193)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3193
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_146575"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..751)
                     /locus_tag="VHN20_05555"
     CDS             complement(<1..751)
                     /locus_tag="VHN20_05555"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX2725266.1"
                     /translation="MRENYDVVIVGGAAMGSSVACHLLSDRAFGGRVAVVEKDPTYQR
                     SASALSAASIRQQFSAVVNVRISLHGIAFLRAIGDLLEVGGERPDVALREGGYLHLAT
                     AAGASVLADNHALQLAEGADILLMDQADLKERFPWLNVADLAAGAWGRSGEGWFDGWA
                     LLQAFRRKARALGATYVTGEVVALEYAGRQVAGVRLRDGSRVGCGALVNCAGAGGRAV
                     AAMAGVELPVHARRRDVFTFTCPERLPDFPLL"
     gene            865..2418
                     /locus_tag="VHN20_05560"
     CDS             865..2418
                     /locus_tag="VHN20_05560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009452254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEX2725267.1"
                     /translation="MSKVATAATFHPTIRDEALAIVRRLGVPDSAFSERGLPARSPIT
                     GEVIACVRPTTAEDAKTAIGRAHKAFLRWRTVPAPRRGEFVRLLGHELRQAKDDLGRL
                     VTLETGKILSEGRGEVQEMIDICDFALGLSRQLYGLTIATERADHRMLETWHPLGVCG
                     VISAFNFPVAVWSWNAALAFVCGDSVVWKPSEKTPLTALATQALVRRAMQAFGEAPEG
                     LCEVLIGRREIGEALVDDHRVPVVSATGSTAMGRLVGPRLAARFARAILELGGNNAAI
                     VCPSADLALALRSIAFAAMGTAGQRCTTLRRLFVHERVYDPLVSRLKRVYDRVDIGDP
                     RLDSTLVGPLIDRNAFEGMERALEEALAAGASIHGGGRIIDSPGGPEAFYMQPALVEM
                     PAQIGPMLRETFAPILYVMRYRDLDEAVRLHNAVPAGLSSSIFTLDLREAEAFLSVAG
                     SDCGIANVNIGPSGAEIGGAFGGEKETGGGREAGSDAWKAYMRRATNTINYGTALPLA
                     RGVTFDIGL"
     gene            2456..>3193
                     /locus_tag="VHN20_05565"
     CDS             2456..>3193
                     /locus_tag="VHN20_05565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007594720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX2725268.1"
                     /translation="MTAVSQPRAKDASAPASFRWNDPFLLEDQLDPDERMIRDSARAY
                     AQDKLLPRVIEAYREEKTDRAIFNEMGSLGLLGLTLPEDYGSAGASYVAYGLVAREVE
                     RVDSGYRSMMSVQSSLVMYPIYAYGDENQRRTFLPKLATGEWVGCFGLTEPDAGSDPA
                     SMRTRADKIDGGYRLTGSKTWISNAPIADVFVIWAKSTAHDNEIRGFVLQKGLKGLAA
                     PKIGGKLSLRASVTGEVVMDGVEVGEDA"
BASE COUNT          518 a         1109 c         1089 g          477 t
ORIGIN      
        1 tcaggagcgg gaaatcgggg aggcgctccg ggcaggtgaa ggtgaagacg tcgcgccgcc
       61 gggcgtggac gggaagctcg accccggcca tcgccgcgac ggcacggccg cctgcgccgg
      121 cgcagttgac cagcgcaccg cacccgacgc ggctgccgtc gcgcagccgg acgccggcga
      181 cctgccggcc ggcgtactcg agcgcaacca cctctcccgt cacgtacgtc gcgcccagcg
      241 cccgcgcctt cctgcggaac gcctgcagca acgcccagcc gtcgaaccag ccctcgcccg
      301 aacgccccca ggcgccggcg gcgaggtccg caacgttgag ccacgggaag cgctccttca
      361 gatcggcctg atccatcaac aggatgtcgg caccttcggc gagctgcagg gcgtggttgt
      421 cggccaggac cgaagcgccg gcggcggtcg cgagatgaag gtaaccgccc tccctgaggg
      481 caacatcggg tcgctcgccg ccaacctcga ggagatctcc gatggcgcgc agaaaggcga
      541 tgccgtgaag cgagatgcgg acgttgacca cggccgagaa ctgctgacgg atcgaggcgg
      601 ccgacagggc cgaggccgag cgctggtagg tcgggtcctt ctcgacgacg gcgacgcggc
      661 cgccgaacgc gcggtccgat aacaggtggc aggcaacgga cgagcccatc gccgctccgc
      721 ccacgatgac gacgtcataa ttctcccgca tcgctcacga ccttcctgcg cgcattctcg
      781 tcacacgctc tcacgttgcc gcccaggccc gggcgggcta tgccgtggtc agcttaagat
      841 gcttccgcag ccggatcgac gcgcatgagc aaggtcgcga ccgccgcaac gttccatccc
      901 acgatccgcg acgaagcgct cgccatcgtg cgccgcctcg gcgttcccga cagcgcgttc
      961 tcggaaagag ggttgccggc ccgctcgccg attaccggcg aggtgatcgc ctgcgtgcgg
     1021 cccacgacgg cggaggacgc caagaccgcc atcggtcgcg cccacaaggc tttcctgagg
     1081 tggcggacgg tgccggcccc gcggcgcggc gagttcgtgc ggcttctcgg gcacgagttg
     1141 cgtcaggcga aggacgatct cggccggctc gtcaccctcg aaaccggcaa gatcctttcg
     1201 gaaggacgcg gcgaagtcca ggagatgatc gatatctgcg atttcgcgct cgggctgtcg
     1261 cggcaactct acggcctgac catcgcgacc gagcgcgccg accaccgcat gctggaaacc
     1321 tggcatccgc ttggcgtctg cggcgtcatc tccgccttca atttcccggt cgcagtatgg
     1381 tcgtggaacg cggccctcgc cttcgtgtgc ggcgattccg tcgtgtggaa gccgtccgag
     1441 aagaccccgt tgacggcgct cgccacgcag gcgttggtca gacgcgccat gcaggcattc
     1501 ggcgaggctc ccgagggcct gtgcgaagtg ctcatcggtc ggcgcgagat cggcgaggct
     1561 ctggtcgacg accaccgggt cccggtcgtg tcggcgaccg gctcgacggc gatgggccgg
     1621 ctcgtcgggc cgcgtctcgc cgcgcgcttc gcccgggcga tcctcgaact gggcggcaac
     1681 aatgccgcca tcgtatgccc gtcggccgat ctcgccctcg ccttgcgctc gatcgccttc
     1741 gccgccatgg gcaccgccgg ccagcgctgc acgaccctgc gccggctgtt cgtgcacgag
     1801 cgcgtttacg atcccctggt ctcgcgtctc aagcgggtct acgaccgggt cgacatcggc
     1861 gatccccggc tcgacagcac gctggtcgga ccgcttatcg accgcaacgc tttcgagggc
     1921 atggaacggg cgctggaaga ggctctcgca gccggcgcga gcatccacgg cggcggccgc
     1981 atcatcgaca gccccggcgg ccccgaggcg ttctacatgc agccggcgct ggtcgagatg
     2041 ccggcgcaga tcggccccat gctgcgggag acgttcgcgc cgatcctgta cgtcatgcgc
     2101 tatcgcgatc tcgacgaggc ggtgcgcctg cacaatgctg tcccggcggg actgtcgtcg
     2161 tcgatcttca cgctcgatct gcgcgaggcg gaggcgttcc tgtcggtggc ggggtcggat
     2221 tgcggcattg ccaacgtcaa tatcggaccg tccggagccg agatcggcgg cgccttcggc
     2281 ggcgagaaag agaccggggg cgggcgtgaa gccggctcgg acgcctggaa agcgtatatg
     2341 cgccgggcta ccaacaccat taactacggc acggcgctgc cgctcgcgcg gggcgtcaca
     2401 ttcgacatcg gcctgtgaac gcgccgcccg agccaaacgg aacaggacca ctcccatgac
     2461 cgccgtttcc cagcccagag ccaaggacgc gagcgcaccc gcgtcgttcc ggtggaacga
     2521 cccgttcctg ctcgaggatc agctcgatcc cgacgagcgc atgatccgcg acagcgcccg
     2581 cgcctacgcg caggacaagc ttctgccgcg cgtgatcgag gcttaccgcg aggaaaagac
     2641 cgaccgcgcc atcttcaacg agatgggaag cctcgggctg ctcggcctga cattgcccga
     2701 agattacggc tccgccggcg cgtcctacgt cgcctatggg ctggtggcgc gcgaggtgga
     2761 gcgcgtcgat tccggctacc gctcgatgat gagcgtgcag tcctcgctgg tcatgtatcc
     2821 gatctatgcc tacggcgacg agaaccagcg ccggacgttc ctgccgaagc tcgccacggg
     2881 tgaatgggtg ggctgcttcg gcctcacgga gcccgacgcc ggctccgacc cggccagcat
     2941 gaggacccgt gccgacaaga tcgacggcgg ctaccggctg acggggtcca agacgtggat
     3001 ctccaacgcg ccgatcgccg atgtcttcgt gatctgggcg aaatcgacgg cgcacgacaa
     3061 cgagatccgg ggctttgtcc tgcagaaggg gctcaaaggc ctggcggcac cgaagatcgg
     3121 cggcaagctc agcctgcgcg cgtcggtgac cggcgaggtg gtgatggacg gcgtcgaggt
     3181 cggggaggac gcc
//
LOCUS       DATAIQ010000327         2201 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_432512, whole genome shotgun sequence.
ACCESSION   DATAIQ010000327 DATAIQ010000000
VERSION     DATAIQ010000327.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2201)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2201)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2201
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_432512"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            714..1196
                     /locus_tag="VHN20_05570"
     CDS             714..1196
                     /locus_tag="VHN20_05570"
                     /inference="COORDINATES: protein motif:HMM:NF015648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PH domain-containing protein"
                     /protein_id="HEX2725269.1"
                     /translation="MTESGAATPPSHTEPLVVRPSTKLLMPVYALAGFLIVLIYIHNS
                     EQSEPQHAWLIIPLMLLLWTAAKHIRLKFTTLSIQAGKLRYETGMLGRSCRTMEVAKV
                     QDVRVDRSVGQRLLGTGNLTIETAGEASRLTMTDIDRPQDVADRILDAARQMPQYRAR
                     "
     gene            1224..1982
                     /locus_tag="VHN20_05575"
     CDS             1224..1982
                     /locus_tag="VHN20_05575"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX2725270.1"
                     /translation="MADKSLHGRIALITGGSRGLGRAMALALAGDGARLALVARDVAK
                     LEEVAAEVREAGGTADIFRADVTDEKQVEALERDVTARCGKVQILINNAGINIRKNIT
                     EFTLDEWNAVMDANLTSVFLMCRAFVPHMRGSGYGRILNMTSIMSHVALGGRTAYASS
                     KTALLGLTRSLALELAGEAITVVGISPGPFGTEMNTALMQNPEINAQFLSKIPLGRWG
                     RVEEVGKLARFLCSDDAAFITGTDILIDGGWCAQ"
     gene            1972..>2201
                     /locus_tag="VHN20_05580"
     CDS             1972..>2201
                     /locus_tag="VHN20_05580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725271.1"
                     /translation="MPSSGRLTRRSALATTLALAGCRRSGRPRIAVIPKATSHVFWLS
                     VQAGAIAAGKELNVEILWNGPSQETEYARQMQ"
BASE COUNT          433 a          754 c          652 g          362 t
ORIGIN      
        1 atggaccgca tagcctcagc cttcgagcat gatgacctga aaacggcgaa ggcgggcagg
       61 tgataagacg cgcatgaacc ggccgcgagc tgactatact gtcgcgtgag gaaatgcggc
      121 aggccgagcg gcggtcagaa aaggcgcgac gagatctggt tcctgctcat ccacccaggg
      181 cttcgcgacc gcttcgtccc cgccgcctgc gtgctgcaca cgcgcacccg gatcggacgg
      241 gacgggccca gtgcgaatgc gagtcccgtt agcagcatca cgcttcccat cgtcctcgtg
      301 catccggcct gattcgccgt gtttgttcac tcgatgctgc tcggccggca ataggaaact
      361 cgcgcacacg gagaagcagt aaacccaaag gatcgaactc tatctggaag ccgtgcctgc
      421 taacgagcgg ggcgcactac tcgggtatct caacccgcct gcgcagccgc cgccagcacc
      481 aacgcgaggc taaatacgac agcagcaatt ttcatcgaca ttcgattccc ttagcgcttc
      541 gtaagtctgc tgcgcccacc ataaggcgct cacttaagac tttaccggac gtagaccctg
      601 ggcggcaagc ggtattctca tctaatacca atcagggact tccgtccccc ttctcagcaa
      661 accgaccgaa cgccggcgag tcgccgccgc tccgaatcgg atacaatacc gctttgaccg
      721 aatcgggtgc agcgacgccg ccgagccaca ctgagccgct ggtcgtccgt cccagcacca
      781 agctgctgat gccggtgtac gcactcgcag gcttccttat cgtcctgatt tatatccata
      841 acagcgaaca gtccgaaccg cagcatgcct ggctgatcat tccgcttatg ctgctgctct
      901 ggaccgccgc caagcacatc cggctgaaat tcacgacgct ctcgatccag gccggcaagc
      961 tccgctatga aacggggatg ctgggccgct cctgccgcac catggaggtc gcgaaggtgc
     1021 aggatgtccg cgtcgaccgc agcgtcggcc agcgcctgct cggcaccggc aacctcacca
     1081 tcgagaccgc cggcgaagcg agccgtttga ccatgaccga catcgaccgg ccccaggacg
     1141 tggccgaccg catcctggac gccgcgcgcc agatgcctca ataccgcgcc cgttgaaccg
     1201 ctacccggac cacaatacaa accatggctg acaaatcact gcacggcaga attgcgttga
     1261 tcacgggagg aagccgcggc ctcggccgcg cgatggcgct cgctctcgcc ggggacggag
     1321 cgcgactggc gctcgtcgcc cgcgatgtcg ccaagctcga ggaggtggcg gcagaggtgc
     1381 gcgaagccgg cggcaccgcc gacatctttc gcgccgatgt gacggacgaa aagcaggtgg
     1441 aggcgctcga gcgcgacgtc accgcccgct gcggcaaggt ccagatcctc atcaacaacg
     1501 ccggcatcaa tatccgcaag aacatcaccg agttcaccct ggacgagtgg aacgctgtga
     1561 tggacgcgaa cctcaccagc gtcttcctga tgtgccgcgc cttcgtcccg catatgcgtg
     1621 gcagcggcta cggacgcatc ctcaacatga cgtcgattat gagccacgtc gcgctcggcg
     1681 gccgtacggc gtacgcctcg agcaagacgg cgctgctcgg gctcacgcgc tcgctcgcgc
     1741 tcgaactcgc cggcgaggcg attaccgtcg tcggcatcag ccccggcccc ttcggcaccg
     1801 agatgaatac cgcgctgatg cagaatccgg agatcaacgc gcaattctta tcgaagatcc
     1861 cgctcggccg ctgggggcgt gtcgaagagg tcggcaagct cgcccgcttc ctctgctcgg
     1921 acgacgcggc tttcatcacc ggcaccgaca tcctcatcga tggaggatgg tgtgcccagt
     1981 agcggccgcc ttaccaggcg ctccgccctc gccaccacgc tcgcgctcgc cggatgccgc
     2041 cggagcggcc gtccgcgcat cgccgtcatt ccgaaggcta cctcgcacgt cttctggctg
     2101 agtgtgcagg cgggcgccat agcagccggc aaggagctga acgtcgagat cctgtggaac
     2161 ggcccgtcgc aggagaccga gtatgcgcgc cagatgcaga t
//
LOCUS       DATAIQ010000328         2413 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_109645, whole genome shotgun sequence.
ACCESSION   DATAIQ010000328 DATAIQ010000000
VERSION     DATAIQ010000328.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2413)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2413)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2413
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_109645"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..329)
                     /locus_tag="VHN20_05585"
     CDS             complement(<1..329)
                     /locus_tag="VHN20_05585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit
                     alpha/FixB family protein"
                     /protein_id="HEX2725272.1"
                     /translation="MTTLLIAEHDNQTLKDVTPKALTAARALGAPVHVLVAGRGCRPA
                     ADAAAKLDGVDKVLLVDDARYDHLLAEPTAALVASLAGPYDALVAAASTTGKNVMPRV
                     AALLDVM"
     gene            complement(361..1110)
                     /locus_tag="VHN20_05590"
     CDS             complement(361..1110)
                     /locus_tag="VHN20_05590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017485165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit beta/FixA
                     family protein"
                     /protein_id="HEX2725273.1"
                     /translation="MKILVPVKRVVDFNVKIRVKPDGSGVDLANVKMSMNPFDEIAVE
                     EAIRLKEQGKATEIVAVSIGPQQAAETIRTALAMGADRGILVKTDQVVEPLAVAKILK
                     AVAAQESPQLIIMGKQAIDDDSNQTGQMLAALLGWPQGTFAYKLAFGDGSIDVTREVD
                     GGLQTVSLKLPAVVTTDLRLNEPRYASLPNIMKAKKKPLAETTAEALGVDVAPRLKVL
                     TTAEPSGRKAGVKVGSVAELVQKLKVEAGVL"
     gene            complement(1305..1883)
                     /locus_tag="VHN20_05595"
     CDS             complement(1305..1883)
                     /locus_tag="VHN20_05595"
                     /EC_number="2.5.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010973170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008817 - corrinoid adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cob(I)yrinic acid a,c-diamide
                     adenosyltransferase"
                     /protein_id="HEX2725274.1"
                     /translation="MVALNRIYTRTGDDGTTGLVTGERRPKHDLRIDAYGTVDETNAC
                     IGLVRVHTGRDGALDAMLARIQNDLFDLGADLATPDGGKPQRRAPLRISDAQVERLER
                     ELDGLNEALSPLRSFVLPGGTAAAAALHLARTVCRRAERLVVALNDKPEEEVSPAAIK
                     YLNRLSDFLFVAARHANDRGEGDVLWVPGQNR"
     gene            complement(2034..>2413)
                     /locus_tag="VHN20_05600"
     CDS             complement(2034..>2413)
                     /locus_tag="VHN20_05600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="acyloxyacyl hydrolase"
                     /protein_id="HEX2725275.1"
                     /translation="KPFTPADLFTSYFVPRPHVGGSLNVGGKTSFAYTGLTWTFDLAP
                     RLFVEGSLGGALHNGETRDHLVAPDRAALGCSPLFRESGSVGVRLSANWSVMATVERL
                     SNNGLCSQDKGLTNIGARIGYSF"
BASE COUNT          375 a          793 c          837 g          408 t
ORIGIN      
        1 tgcatgacgt cgagcagggc ggcgacgcgc ggcatcacgt tcttgcccgt cgtcgacgcc
       61 gcggcgacga gtgcgtcata agggccggcc agcgatgcca cgagggccgc cgtcggctcg
      121 gcgagcaggt ggtcgtagcg ggcgtcgtcg acgagcagca ccttgtcgac gccatcgagc
      181 ttggcggcgg cgtcggcagc gggccggcat ccgcggccgg caacgaggac atgcaccggc
      241 gcgcccaggg cacgggcggc ggtcaacgct ttcggcgtca cgtccttgag cgtctggtta
      301 tcgtgttcgg cgatgagcag cgtggtcatt gcacaacaaa tctttcagga gcggcgcgcg
      361 tcacaggacg cccgcctcga ctttgagctt ctgcacgagc tcggcaacgg acccgacctt
      421 aacgccggcc ttgcggccgc tcggctccgc cgtcgtgagc accttgaggc gcggcgccac
      481 gtcgacgccg agcgcctcgg cggtggtttc ggcgagcggc ttcttcttcg ccttcatgat
      541 gttcggcagc gacgcgtagc gcggctcgtt gaggcgcagg tccgtggtca ccaccgcagg
      601 cagcttgagc gacacggttt gcaggccgcc gtcgacctcg cgcgtcacgt cgatcgaacc
      661 gtcgccgaac gccagcttgt aggcaaaggt gccttgcggc cagccgagca acgccgccaa
      721 catctgaccg gtctggttgc tgtcgtcatc gatcgcctgc ttgcccatga tgatcagttg
      781 cgggctttcc tgcgcggcga ccgccttgag gatcttggcg accgccagcg gctcgacgac
      841 ttggtcggtc ttcaccagga tgccgcggtc ggcccccatg gcgagggccg tgcgaatggt
      901 ttccgccgcc tgttgcgggc cgatcgagac ggcgacgatc tcggtcgcct tgccctgctc
      961 cttgaggcgg atggcctctt cgaccgcgat ctcgtcgaac gggttcatcg acatcttgac
     1021 gttggcaagg tcgaccccgg atccgtccgg cttgacgcgg atcttcacgt tgaaatcgac
     1081 cacccgtttg acgggcacga ggatcttcat ccatcaatcc ttcggccgaa gcccttcgac
     1141 cacgtgcacg gtcaggtgcg tcggcaatgc gctgttgaat gcgagcggcc gccgcccttg
     1201 gggtctcggc gccaaaacgc tgaagcgagc ggacgtaacg atgccgctcc gcaaatgtca
     1261 acgtgacggc gacgatccgg ccggcagcgg cggcctgccg gcctttatcg gttctgcccc
     1321 ggcacccaga ggacgtcgcc ctcgccgcgg tcgttggcgt gacgcgcggc gacgaacagg
     1381 aagtccgaca atcgattcag gtatttgatg gcggccggcg agacctcctc ctccggcttg
     1441 tcgttcagcg ccacgaccag ccgctcggcg cggcggcaga cggtgcgggc gaggtgcagc
     1501 gcggcagcgg ccgccgtgcc gcccggcagg acgaacgagc gcaggggaga aagcgcctcg
     1561 ttgagcccgt cgagctcgcg ctcgaggcgc tcgacctgcg catcgctgat gcgcagcggc
     1621 gcgcgccgct gcggcttgcc gccgtcgggc gtcgccagat ccgcgccgag atcgaacaga
     1681 tcgttctgga tgcgcgccag catcgcgtcg agagcgccgt cccggcccgt atgcactcgc
     1741 acgaggccaa tgcaggcatt ggtttcgtcg acggtgccat aggcgtcgat acgcaggtca
     1801 tgcttcggcc ggcgctcgcc ggtgacgagg ccggtcgtgc cgtcatcacc ggtgcgggtg
     1861 tagatgcggt tcagggcaac catggtcagc gctcacgtct gcgatttccc ggcggctccc
     1921 gtgcggccgg gcgtgccaaa cgacgctaaa gcattttccc gcaacgggga cccggtcgcc
     1981 gaagaaattc atgcggctct cgagcatgat ccggcgaagt ggataccgga cggctagaag
     2041 ctgtagccga tgcgtgcgcc gatattcgtc aggcctttgt cctggctgca caggccgttg
     2101 ttggaaaggc gctcgacggt cgccatgacg ctccagttgg ccgacagcct gacgccgacc
     2161 gagccggatt cgcggaacag cggcgagcag ccgagcgcgg cgcggtccgg cgcgaccaga
     2221 tggtcgcgcg tctcgccgtt gtggagggcg ccgccgaggc tgccctcgac gaaaagccgc
     2281 ggggcgagat cgaaggtcca ggtcaggccg gtataggcga agctcgtctt gccgccgaca
     2341 ttgaggctgc cacccacgtg cggccgcggc acgaaataac tcgtgaaaag gtcggcgggg
     2401 gtaaagggct tgt
//
LOCUS       DATAIQ010000329         1686 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_109689, whole genome shotgun sequence.
ACCESSION   DATAIQ010000329 DATAIQ010000000
VERSION     DATAIQ010000329.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1686)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1686)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1686
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_109689"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..432
                     /locus_tag="VHN20_05605"
     CDS             <1..432
                     /locus_tag="VHN20_05605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725276.1"
                     /translation="EMTREYRLSFNSGDIDWDDPIPPEVTSDVLGRRMTCTISRTSLL
                     AWSLMTVAEVHVADLAPGGWIKIVVGTGDDFDERAFKSEIARVLAAVSAVPGDRPAEP
                     PAFTLLGYVPGIAPPRPLPFVVIPGLAKREPGTHDRVRRRD"
     gene            complement(585..1520)
                     /locus_tag="VHN20_05610"
     CDS             complement(585..1520)
                     /locus_tag="VHN20_05610"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX2725277.1"
                     /translation="MTTLVTGAGLIGTAFAREALARGEQVVFVDPEPRADFLTTKLGA
                     GGATLVRADIRDLPALVAAIRAHRVDTVVHTAGLIGGRVQQSLGLAFDINLGGVRNVA
                     EAVRLGGVRRLVHVSTFGVYDSRRTPSGAIDEDFPRGAARGYGNYKAAQELILDAYAA
                     EHGFELIMLRPANVFGFGHFWSGSGGGAKMQELVRAGIEGRAARIPATETVANEYVYA
                     KDVGRAVDLAATVPMPPTNVFNIGNGVVTPFEELLTTLRALLPELKVEVTPGEARKAK
                     TFPLDLTRAKQHLGWEPRFPLRAAFEDYIAELRRA"
BASE COUNT          248 a          594 c          572 g          272 t
ORIGIN      
        1 gagatgaccc gggagtatcg gctcagcttc aacagcgggg acatcgattg ggatgatccc
       61 attccgcccg aggtgacgtc ggatgtgctc ggcaggagga tgacgtgcac catcagccgc
      121 accagcctgc tcgcctggtc gctgatgacc gtcgccgagg tccacgtcgc cgacctggcg
      181 ccgggaggat ggatcaagat cgtcgtcggc accggcgacg acttcgacga gcgtgccttc
      241 aagagcgaaa tcgcccgcgt ccttgcggcc gtcagcgcgg tgcccggcga ccggccggcg
      301 gaaccaccgg ccttcacgct gctcggctac gtgcccggaa tcgcgccgcc gcggccactc
      361 cctttcgttg tcattccggg gctcgcgaag cgagaacccg gaacccacga ccgggtgcga
      421 cgccgcgatt gatgccccga cctgccctcc cctcgtcatt ccggggccga gcgcaagcga
      481 ggaacccgga acccacgacc gggtgagacg acaatcgcac cgtcgcactt gatcatgggt
      541 tccgggttcg atccttcgga tcgccccgga atgacacggg tttttcaggc gcggcgcagc
      601 tcggcgatat agtcctcgaa cgccgcgcgc agaggaaagc gcggctccca gccgagatgt
      661 tgtttcgccc gcgtcaggtc gagcggaaac gtcttggcct tgcgcgcctc gccgggcgtg
      721 acctccactt tcagctccgg cagcagcgcg cgcagcgtgg tcaacagctc ctcgaacggc
      781 gtcacgacgc cgttgccgat gttgaacacg ttggtcggcg gcatcggcac ggtggcggcg
      841 aggtcgacgg cgcggccgac gtccttggcg tagacgtatt cgttggcgac cgtctcggtc
      901 gccgggatgc gcgcggcgcg gccctcgatg ccggcgcgca ccagctcctg catcttggcg
      961 ccgccgcccg agcccgacca gaagtggccg aaaccgaaca cgttggcggg ccgcagcatg
     1021 atcagctcga agccgtgctc ggccgcgtag gcgtcgagga tcagctcctg cgccgccttg
     1081 tagttgccgt agccgcgcgc ggcgccgcgc ggaaaatcct cgtcgatggc gccgctcggc
     1141 gtgcgccgcg aatcgtagac gccgaaggtg ctgacatgca cgagccggcg cacgccgccg
     1201 agccgcaccg cctcggcgac gttgcgcacg ccgccgagat tgatgtcgaa ggcgaggccg
     1261 agcgactgct gcacgcgccc gccgatcaga ccggccgtgt gcaccaccgt gtcgacgcgg
     1321 tgcgcgcgga tcgccgcgac cagcgccggc aggtcgcgga tgtcggcgcg caccagcgtt
     1381 gcgccgccgg cgccgagctt cgttgtgagg aagtcggcgc gcggctccgg gtcgacgaac
     1441 acgacctgtt cgccgcgcgc gagcgcctct cgcgcgaagg ccgttccgat cagccccgcg
     1501 ccggtgacca gcgtcgtcat gaggtccctt atttcttgtc gggcgccttc atctcgggcg
     1561 tcgccttgct cgcctcctgc agcttgtcga cgagcgcctt cggcgtcgcg tagacgcgct
     1621 tgaggatgtc ctgcatctcc tcgccgctcg agggattgac ctcgagctgc tgcttctcga
     1681 cgtcgg
//
LOCUS       DATAIQ010000330         4503 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_294773, whole genome shotgun sequence.
ACCESSION   DATAIQ010000330 DATAIQ010000000
VERSION     DATAIQ010000330.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4503)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4503)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4503
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_294773"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            412..588
                     /locus_tag="VHN20_05615"
     CDS             412..588
                     /locus_tag="VHN20_05615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725278.1"
                     /translation="MSRFADYASAALLILTVELTAALGRMHLTWSRRVTAARQFGLRP
                     LTVPVENGRTKAWS"
     gene            679..1311
                     /locus_tag="VHN20_05620"
     CDS             679..1311
                     /locus_tag="VHN20_05620"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX2725279.1"
                     /translation="MSYYRFDLWRDGEFFPVDLSVDLPAESGLRGKAAEAARELMQSS
                     GFRHIADWTGFRFEVTDSSGNRVLTFPFEAAGQAEGGPGFAASGHVDAAVLLVDDDEA
                     SVVLAAKILRRAGFDHVDTAPNGAIALAMMRSKSYRLVISDWNMPEMNGLELLQAIRA
                     DDRLNGTPFLLTSIDDAAERVNRAALAGASAFLSKPFDVPALKTNVEKML"
     gene            complement(1342..1569)
                     /locus_tag="VHN20_05625"
     CDS             complement(1342..1569)
                     /locus_tag="VHN20_05625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725280.1"
                     /translation="MPTDDASATALEIWAEARERASAELWTKAADLAEGGCRGDAEHF
                     GFAARLLALRAIQDRARAAALRVRTEPVTIE"
     gene            complement(1559..1735)
                     /locus_tag="VHN20_05630"
     CDS             complement(1559..1735)
                     /locus_tag="VHN20_05630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725281.1"
                     /translation="MHDTEAIGMESERVDWARIERKLRVSIKLMKRGQREIQRLRDKE
                     SRQVRPDRAADDAD"
     gene            complement(2294..2596)
                     /locus_tag="VHN20_05635"
     CDS             complement(2294..2596)
                     /locus_tag="VHN20_05635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725282.1"
                     /translation="MTGVMETGLSGSGPPPPDYNLFRRIEDPEFFCAVAQDKPVPPFL
                     TADVWQFVGGGPEASRGLLAHRAAHASAGDRLDGFYLFYARCGVEHPALLEMEEAA"
     gene            complement(3202..>4503)
                     /locus_tag="VHN20_05640"
     CDS             complement(3202..>4503)
                     /locus_tag="VHN20_05640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012320087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YifB family Mg chelatase-like AAA ATPase"
                     /protein_id="HEX2725283.1"
                     /translation="YDLPIALAIMAAIGAVPGDALAGFTVLGELALDGSITAVAGVLP
                     AAIAANARSEGLICPAACGPEAAWASRDIDILAPRSLIQLANHFKGLQVMARPEPAVA
                     PGGAALPDLKDIKGQESAKRALEIAAAGAHNLLMSGPPGAGKSMLAQRLPSILPPLAP
                     RELLEVSMIQSVAGQLANGALSSRRPFRAPHHSASMPALVGGGLNARPGEVSLAHHGV
                     LFLDEFPEFQPQALDSLRQPLETGEVMIARANHRVTYPARFQLVAAMNPCRCGQATEP
                     GFVCRRQPNERCIAQYQARLSGPLIDRIDLVIEVPAVSAADLVLPPPTEGSTEVAARV
                     VGAREMQTRRYSAFGLDGVATNAACPAPVIEEVAQPDADGLALIRIAAEGMRLSARGF
                     HRVLKVARTLADLDGEERVRRMHVAEALSYRSHADRRAAAA"
BASE COUNT          732 a         1495 c         1507 g          769 t
ORIGIN      
        1 ctgttgttga gacgtcatcc acagatgcga tggcgatgac gaccgaggtc gcgaggaaac
       61 ccgcttcgtc gtggtcgagg agacgctttc aaggttgtgg ccgtcgccgc gtgcctccgc
      121 ctcgtactcg cgcacggcgg cggcgagtcg ccgccgcctc gagaacgaat cggtcgagct
      181 cgaggccgtc tcgtcgcgga tcaattgtcc atcggcggcg cgagtatgaa agaagtatgt
      241 ggaagcagca ctagctttgg ttgcggtgca ttttcttcgg cggatcggat ccgcttcgcg
      301 ggaaaatgct ctgcacaacc gccctcgcgg agcggcgtga ttatttgttt gttcacgcat
      361 ctgctcgaca ttgaggtcgt aagttgagtg ggtgcgtaag gagttgtcag tatgagtagg
      421 tttgccgact acgcatctgc ggccttgctg atcctgaccg tcgagctcac tgcggcactg
      481 gggcgaatgc acctcacgtg gtccagacgc gtcacggcgg cgcgccagtt cggccttcgg
      541 ccgctgaccg ttccggtcga gaacgggcgg acgaaagcct ggagctgacc ggatcccgtc
      601 gccctagtgg atctttgatc aatgttgaga cggcgcccat agaggttatc gccgggcgcc
      661 gcgaaggggg acgcagtttt gtcctactat cggtttgacc tctggcgcga cggcgaattc
      721 ttcccggtcg atctctcggt cgaccttccg gccgagagcg gcctgcgcgg aaaggctgcc
      781 gaggcggcgc gcgagctgat gcaatcgtcg ggattccgtc atatcgcgga ctggaccggc
      841 ttccgtttcg aggtgaccga cagcagcggc aatcgcgtgc tcaccttccc gttcgaggcc
      901 gcgggccaag ccgagggcgg cccagggttt gccgcgagcg gccacgtcga cgcggcggtc
      961 ctgctggtgg atgacgatga ggcatccgtc gtgctggcgg cgaagattct gaggcgcgcg
     1021 ggcttcgacc acgtcgacac cgctcccaac ggcgccatcg ccctcgccat gatgcggagc
     1081 aagagctatc gcctcgtgat ctcggactgg aacatgcctg agatgaacgg gctcgagctg
     1141 cttcaggcca ttcgcgccga cgatcgcctg aacggcaccc cgtttctcct cacctcgatc
     1201 gacgacgccg ccgaacgcgt caaccgggcc gccctggccg gcgcgagtgc attcctgtcg
     1261 aaaccgttcg acgtgccagc cctgaagacg aacgtcgaga agatgctgta gggcagcgcg
     1321 tcgcgctcgc ccggcgcgag ctcattcgat ggtgacgggc tcggtgcgaa ctcgcagcgc
     1381 ggcggcgcgt gcgcgatcct ggatcgccct cagcgcaagc aggcgtgccg cgaagccgaa
     1441 gtgctctgcg tcaccgcggc acccgccctc ggcgaggtcc gcggccttcg tccagagttc
     1501 ggcgctcgcc cgttcacgag cttccgccca aatctcgagc gcagtcgccg acgcgtcgtc
     1561 agtcggcatc gtcggcggct cgatccggcc ggacttgccg tgattccttg tcgcgcaggc
     1621 gctggatctc gcgctggccg cgtttcatca acttgatcga gacgcgcaac ttgcgttcga
     1681 tccgcgccca gtcgacgcgt tccgactcca tcccgattgc ttccgtgtca tgcatctctg
     1741 agcttcctcg ccggatgtcc aggtaacgtc aggccgatgc atctagcttg gccgttcgcg
     1801 gcgagaacgg ggcaagaccg gacagagatc gtgaccaact tccggcaatt acgggcaagc
     1861 ggatgcgtct acaccgggcg tgcggcggcg ggtccggtgc aatttcatcc tggggacgca
     1921 gcagatgccg taacgcgcag tcacaggaca ggccggcagc cgaagctttt gcgcgaggca
     1981 tccggacggc gcttcaaggc caaccatagt ggaccgactg atcaccgccg atcgggtcgt
     2041 gtcgatggac ggcggccgca tcgtcgagga ttccccgtgc gaggcgtttt tttgcgcagc
     2101 caaagagcga tcgcgcgcct gtcgaagatc ctctcgcatg agagcatgat ccgtgaagtg
     2161 gatccggcgt cgccgaaaaa ggcttgtccc ggacttgatt cgggatcatg cggcccaaga
     2221 agaaatagag cgggatcgat tcaatccgaa ttgatcccgc tgacgtcctg acgcgcagtc
     2281 ttgatggttg gcgctaggct gcctcttcca tttccagcag ggcagggtgc tccacgccgc
     2341 agcgcgcata gaagaggtag aagccatcca gccggtctcc cgccgacgca tgggcggccc
     2401 ggtgtgccag cagtccccgg cttgcctccg gcccgccgcc gacgaactgc cagacgtcag
     2461 ccgtgaggaa gggcggcaca ggcttgtcct gggccaccgc gcagaaaaat tccgggtcct
     2521 cgatgcgtcg aaacaggttg tagtctgggg gcggcggccc gctaccgctc aagcccgttt
     2581 ccatcacgcc agtcattgaa tgcctcccca cccctttgtg ccccggtatt tttaccggtg
     2641 gctaggaaaa gcatttcagg atgatgctcc cgtgtcatca acatacctga ttcgggcgag
     2701 gttttcaccg ctgaacacag gaacggctcg gtccccatcc atccgccgcc cttgctccac
     2761 aacaaatcgt gcatgtttac gccgccgcac gctggtcggc atgcgagggc gacgatggcg
     2821 cttccccagg cgcgcggcgc tctctccgat gcccgacccg gatgtcgtta agggtgccga
     2881 atgcgcaaag caccccggta gccaagacac gtggtgcgtc cgcgaagacc agcccccacg
     2941 cagcgaggag gccgatcacg tagagcacca tggcccagcg ggttcgatgg aggagtttca
     3001 tagcggccgc accatcggcg gggaggttgc agtcgggagc acgccaccga gggcgcagcg
     3061 atgcctgttg ggccggaatc ctcgacgctc tttcctgtcc acggccttgg tctcctcgag
     3121 cctcagggaa ctgcctgggc cgccgctcac cattcgctct gtcacgccct ccccatgtca
     3181 cgtccgcgtc cttgcgcccg ctcacgctgc cgccgcgcgc cggtcggcat gcgagcggta
     3241 cgacagcgct tcggccacgt gcattcgcct gacgcgttcc tcgccgtcga gatccgcgag
     3301 cgtgcgcgcc actttcagga cacgatgaaa gccgcgcgcc gacagacgca tgccctcggc
     3361 ggcgatgcgg atcagcgcga gaccgtcggc atcgggctgc gccacctcct cgatcacggg
     3421 cgccgggcag gcggcattgg tggcgacgcc atcgaggccg aaagcggagt agcgccgcgt
     3481 ctgcatttcg cgggcgccga cgacgcgcgc cgcgacctca gttgaccctt ccgtcggcgg
     3541 cggcagcacg aggtcggcgg cgctcaccgc cggcacctcg atgacgaggt cgatgcggtc
     3601 gatgagcggc cccgacaggc gcgcctggta ttgcgcgatg cagcgctcgt tcggctgccg
     3661 ccggcagacg aagcccggct cggtcgcctg cccgcagcgg cacgggttca tcgccgcgac
     3721 cagctggaag cgcgccggat aggtgacgcg gtggttggcg cgcgcgatca tcacctcgcc
     3781 cgtctcgagc ggctggcgca gcgaatcgag cgcctgcggc tggaactcgg gaaactcgtc
     3841 gaggaagagc acgccgtgat gcgccagcga cacctcgccg ggacgcgcgt tgaggccacc
     3901 gccgaccagc gccggcatcg aggcggaatg gtgcggagcc cggaatggcc gccggctcga
     3961 gagcgcgccg ttggcgagct ggccggcgac cgactggatc atcgacactt cgagcagctc
     4021 gcgcggcgcc agcggcggca ggatcgacgg caggcgctgc gccagcattg actttccggc
     4081 cccgggcggg ccgctcatca ggaggttatg cgcgccagcg gccgcgatct cgagcgcgcg
     4141 cttggcgctt tcctgcccct tgatgtcttt caggtcgggg agggcggcgc cgcccggcgc
     4201 caccgccggc tccggccgtg ccatcacttg cagccccttg aaatgattgg ccagctggat
     4261 cagcgagcgc ggcgccagga tgtcgatgtc gcgggaggcc caggcggcct caggcccaca
     4321 tgcggccggg cagatcaggc cctcggagcg ggcgttcgcg gcgatcgccg ccggcagcac
     4381 accggcgacc gccgtgatcg agccgtcgag cgcaagctcg ccgagcacgg tgaagccggc
     4441 gagggcgtcg cccggcaccg cgccgatcgc cgccatgatg gcgagcgcga tcggcaggtc
     4501 gta
//
LOCUS       DATAIQ010000331         3063 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_294846, whole genome shotgun sequence.
ACCESSION   DATAIQ010000331 DATAIQ010000000
VERSION     DATAIQ010000331.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3063)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3063)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3063
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_294846"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..381)
                     /locus_tag="VHN20_05645"
     CDS             complement(<1..381)
                     /locus_tag="VHN20_05645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX2725284.1"
                     /translation="MRHIKRLALLCVPAALACATPAHAQELRIALASEPTAIDPHFHN
                     LAVNNALRRHIFEGLVGQDAQQTPRPELAASWRAVDDTTWEFKLRPDVKFSNGSEFTA
                     RDVVYSICRVPTVENSPSSFAVATR"
     gene            563..1723
                     /gene="argE"
                     /locus_tag="VHN20_05650"
     CDS             563..1723
                     /gene="argE"
                     /locus_tag="VHN20_05650"
                     /EC_number="3.5.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008971740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008777 - acetylornithine deacetylase
                     activity [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetylornithine deacetylase"
                     /protein_id="HEX2725285.1"
                     /translation="MNPETIAEVLSRLVAFDTTSRNSNLPLIDWVEDYLARLGIAAER
                     IYGAAGEKANLWATIGPPDVPGFILSGHTDVVPVDGQVWASDPFRLRRDDKRLYARGA
                     CDMKGFLAVCLAMVPRMRERPLARPIHLAFSYDEEVGCIGARGIVEQLARNSVRQEAC
                     FVGEPTLMGVIIGHKSKRSLRVEVRGRTCHSSLAPDGVNAVEFAARLVAKIQTMARRL
                     AAEGARDALYDVPYSTLHVGVLRGGTALNIVPDHAELLFEVRAVGADDPDSLVGEIVA
                     YARDRLEPEMKAVDPDVGFDFKVMAGFPGLDMPADHALVKLTKSLAGRNDHAKVAFGT
                     EAGLYQEIAGVPTVVIGPGSIDQAHKADEWIAIAELERCARFIDALIDRCRS"
     gene            complement(1862..2098)
                     /locus_tag="VHN20_05655"
     CDS             complement(1862..2098)
                     /locus_tag="VHN20_05655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008875966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC ligand binding domain-containing
                     protein"
                     /protein_id="HEX2725286.1"
                     /translation="MQTFFVEIKCKLGKTYDVASALADREIASEIYSTAGNYDILAKF
                     HVDDGVDIGHFVAQNVQTIPQIQDTRTVIAFKAF"
     gene            complement(2224..>3063)
                     /locus_tag="VHN20_05660"
     CDS             complement(2224..>3063)
                     /locus_tag="VHN20_05660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020091194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003979 - UDP-glucose 6-dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0000271 - polysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide sugar dehydrogenase"
                     /protein_id="HEX2725287.1"
                     /translation="ALGDFRAPDRVVVGDDGGWGGDAVVELYRPLDAPLVRTDVASAE
                     MVKLASNAFLATKISFINEIADLCEAVGADVQEVARGIGLDNRIGSKFLHAGPGYGGS
                     CFPKDTLALIKTAQDHDAPMRIVETVVAVNDQRKRAMARKVIAACGGNVRGKTIAVLG
                     LTFKPNTDDMREAPSLSVIQALQDAGAVIRAHDPEGIEQARAFLDNVAYAQSPYDCAS
                     GAHALVIVTEWDAYRALDLDLIKDRLAAPVIVDLRNIYPPDDMRRRGFTYVSVGRPQE
                     TGQ"
BASE COUNT          473 a          975 c         1112 g          503 t
ORIGIN      
        1 gcgggtcgcg accgcgaacg aggacggcga gttctcgacc gtgggcacgc ggcagatcga
       61 gtagacgacg tcgcgggcgg tgaactcgct gccgttggag aatttcacgt ccggccgcaa
      121 cttgaattcc caggtcgtgt cgtcgacggc gcgccaggag gcggcgagct cgggccgggg
      181 cgtctgctgc gcgtcctgcc cgacgagccc ttcgaagatg tgccggcgca gcgcgttgtt
      241 aactgcgaga ttgtggaaat gcgggtcgat cgcggtcggc tcggacgcga gggcgattcg
      301 cagttcctgg gcatgtgccg gtgtcgcgca ggcaagcgcg gcgggcacgc acaggagcgc
      361 gagccgcttg atatgcctca tccgtttcct ccgcggcgca gcccccctct gctgcggggg
      421 catggaacaa cgatcgcgcc gcgcatgcaa gcgagggatc ggcgacctgg ctccccgaaa
      481 ctggcgcgcg cggcggttcg gcttgtcttg gcggcggatc tgggcggaaa tggtgccgga
      541 cagggggcgc gagggcagag ccatgaatcc cgagacgatt gccgaggtgc tgtcgcggct
      601 ggtcgccttc gacaccacga gccggaactc gaatctgccc ctgatcgact gggtcgaaga
      661 ctacctggcg cggctcggga tcgccgcgga gcgcatctac ggcgcggcgg gcgaaaaggc
      721 gaatctgtgg gccacgatcg ggccgccgga cgttcccggc ttcatcctgt ccggccacac
      781 cgacgtggtg ccggtcgacg ggcaggtgtg ggcgagcgac ccgttccgcc tgcgccgcga
      841 cgacaagcgg ctctatgcac gcggcgcgtg cgacatgaag ggttttctcg ccgtctgcct
      901 cgcgatggtc ccgcgcatgc gcgagcggcc gctggcacgt cccatccatc tcgccttctc
      961 ctacgacgag gaggtcggct gcatcggcgc gcgcggcatc gtcgagcagc tggcgaggaa
     1021 cagcgtgcgg caggaggcct gcttcgtcgg cgagccgacc ttgatgggcg tgatcatcgg
     1081 tcacaagagc aagcgcagcc tgcgcgtcga ggtgcgcggc cggacctgtc attcgtcgct
     1141 ggcgccggac ggcgtcaacg ccgtcgaatt cgcggcgcgg ctggtcgcga agatccagac
     1201 gatggcgcgt cgcctcgcgg ccgagggcgc gcgcgacgcg ctttacgacg tgccgtattc
     1261 gacccttcac gtcggcgtgc tgcggggcgg cacggcgctg aacatcgtgc ccgaccacgc
     1321 cgagctcctg ttcgaggtgc gcgccgtcgg cgccgacgac cccgactcgc tcgtcggcga
     1381 gatcgtcgcc tatgcccgcg acaggctcga gcccgagatg aaggccgtcg atccggatgt
     1441 cggcttcgac ttcaaggtga tggcgggctt tcccgggctc gacatgccgg cggaccacgc
     1501 gctggtgaag ctgacgaaat cgctcgccgg acgcaacgac cacgccaagg tggcgttcgg
     1561 gacggaggcc gggctctacc aggagatcgc cggcgtgccg accgttgtca tcgggcccgg
     1621 ctcgattgac caggcgcaca aggccgacga atggatcgcg atcgccgagc tcgagcgatg
     1681 cgcgcgcttc atcgacgcgc tgatcgacag gtgcaggagc taatccagcc cacattgtca
     1741 ttccggggcg gccgaaggcc gagcccggaa cctatgactg ggtgcgacga tccaccaatg
     1801 tcgcgtcccg tcatgggttc cgggttcctc gctgcgctcg gccgcggaat gacagtcatt
     1861 ttcagaacgc cttgaaggcg atgacggtgc gggtgtcctg gatctgcggg atggtctgca
     1921 cgttctgggc cacgaaatgg ccgatgtcga cgccgtcgtc gacatggaac ttggccagaa
     1981 tgtcgtaatt gcctgcggtc gaatagatct cggacgcgat ctcgcggtcg gcgagggcgc
     2041 tcgcgacgtc gtaggtcttg ccgagcttgc atttgatctc gacgaagaag gtctgcatca
     2101 catcgctcca ggctggtgct cggcaaaggg gacagggggc agggggcagt cggcagtcgg
     2161 cagtcggtgg taggcagtag gcagtgggga acggcaactc gtcaattccc gactgcctac
     2221 tgcctactgc ccggtctcct gcgggcgccc gacgctcaca taggtgaagc cgcgccggcg
     2281 catgtcgtcg ggcgggtaga tgttgcgcag gtcgacgatg acgggcgcgg cgagccgatc
     2341 cttgatcagg tcgaggtcga gggcgcggta ggcgtcccac tcggtgacga tgacgagcgc
     2401 atgcgcgccg ctggcgcaat cgtaggggct ctgcgcatag gcgacgttgt cgaggaaggc
     2461 gcgcgcctgc tcgatgcctt ccggatcatg cgcccggatc accgcgccgg cgtcctgcag
     2521 cgcctggatg acggacaggg acggcgcctc gcgcatgtcg tcggtgttgg gcttgaaggt
     2581 gagcccgagc accgcgatgg tcttgccgcg cacgttgccg ccgcaggcgg cgatcacctt
     2641 acgcgccatg gcgcgcttgc gctggtcgtt gacggcgacg acggtctcga cgatgcgcat
     2701 cggcgcgtcg tgatcctggg ccgtcttgat cagggcgagg gtgtccttcg gaaagcagga
     2761 gccgccatag cccggccccg catgcaggaa cttcgagccg atgcggttgt cgaggccgat
     2821 gccgcgcgcc acctcctgca cgtccgcccc gaccgcctcg cacaagtcgg cgatctcgtt
     2881 gatgaagctg atcttggtcg ccaggaaggc gttggaggcg agcttgacca tctccgcgct
     2941 ggcgacgtcg gtgcggacga gaggcgcgtc gagggggcgg tagagctcga cgaccgcgtc
     3001 tcccccccac ccgccgtcgt cgccgaccac gacccggtcg ggggcgcgaa agtcgccgag
     3061 ggc
//
LOCUS       DATAIQ010000332         5983 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_386715, whole genome shotgun sequence.
ACCESSION   DATAIQ010000332 DATAIQ010000000
VERSION     DATAIQ010000332.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 5983)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5983)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5983
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_386715"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1403)
                     /locus_tag="VHN20_05665"
     CDS             complement(<1..1403)
                     /locus_tag="VHN20_05665"
                     /EC_number="1.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012319266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite reductase subunit alpha"
                     /protein_id="HEX2725288.1"
                     /translation="MTMHAPPPALLIPETAPFSAEQRAWLSGYFAALLAPDANAMPVP
                     LGDGIALPGGAEAAPLADAGDAPWHDPSLAIDTRMTMAEARSLAPRLMAAMAQQDCGQ
                     CGYSCADYANALFLKKEERLNLCAPGGKDTLRMLKKLAEELDGAKAEAKAGAPTPAVV
                     GAASTTAVAPEARGRWREHPVEATFIARRRLNAASSEKETWHIDIDLGGSGLDYGVGD
                     SLGVFPVNAASLVDAVIAQLGARPERMIGDTTLRERLLGEASLGSAPDALFQLISFVT
                     GGEERRKAQALAAGDDPDGDAAQLDVLAALHKFPRARPDAEAFIETLEPLQPRLYSIS
                     SSPKASPGRVSLTVDAVRYALNKRLRFGVASTFFAERLERGAALKVYVQKAHGFALPS
                     DPATPIIMVGPGTGIAPFRAFLHERRAVGAPGRNWLFFGHQRQDADFFYKDELTAMRE
                     AGLLNRLTLAWSREGPQ"
     gene            complement(1400..3274)
                     /locus_tag="VHN20_05670"
     CDS             complement(1400..3274)
                     /locus_tag="VHN20_05670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018044084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NirA family protein"
                     /protein_id="HEX2725289.1"
                     /translation="MPDFSAEQKRYLEGLAAGVAVARSTGGLARAGTPGASVPTGPDA
                     VHAKAQDKVIAGGGKLSEQEKWKRAEHPFDAYGRLAQQAGEGDYPKPEDNFRWRYHGL
                     FYVAPAQNSFMCRLRIANGILNHWQFAGLADLADRYGGGYAHVTTRANLQVREIVAEN
                     GAPFLEGIQDLGLCGKGAGADNIRNVTGSPTAGIDPQELIDTRPPARAWHFHILNDRS
                     LYGLPRKFNVAFDGGGRVPVLEETNDIGFQAVEVREGAPVAAGVWMRVVLGGITGHHD
                     IARDTGVICSPKDCVAVADAIVRVFIENGDRTNRNKARLKYVLDAWGFERFLEAVEGK
                     LGRPLTRIGGEHLAPRGDTDRFAHVGVHPQKQAGRSWIGIVLPVGKLTTEQMRGLAAV
                     AQTCGDGDIRLTVWQNLILSGVADAHVAEAEARIGALGLTTKASSIRAGLVACTGNRG
                     CKFAASDTKGHALTIAEHVEVRVDLDVPVNIHLTGCHHSCAQHYIGDIGLIGAKVAVN
                     ENGDTVEGYDVVVGGGFGPNARIGRELWKGVKADDCPARIEALLRVYLAGRTGPDESF
                     QAFTMRHEIEALRELVNSLAPLGGDGGGADAGAILSNTLPRSPTSDERAGSDLHEAAA
                     "
     gene            complement(3283..4509)
                     /locus_tag="VHN20_05675"
     CDS             complement(3283..4509)
                     /locus_tag="VHN20_05675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007562447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX2725290.1"
                     /translation="MRAGAMHRERLVVIGNGMAGLRFLERLGTHAPDRFDVTVVGAEA
                     SPAYNRVLLSSLLAQEVDEESCRFRERRWYLQHGVRLITGAPATAIDAAEREVRVGDL
                     TLLPFDRLVLATGSTPIRLAKPGMDLPGVMTFRDLADVAAIRAAARPGTRAVVIGGGL
                     LGLEAAFGLVRYGVETTLVHVMDRLMERQLDARAAGLVKAATERRGIRVLLEADTAAV
                     EGDSRLLGVQLADGRLIPADLVVVAVGVRPATDLARAAGLEVRRGVAIDDALETSVPG
                     IYAIGECAEHRGIAHGLVDPAYEQADILARRLGQANLLYEGSVPATSLKVSGVPVFSA
                     GDIHDNDNTIVFTDPGAAAYRKLVVRDDRLVGALLVGDVAESAWYLDLIRSGASIRPF
                     RNHLMFGRSFAERSAA"
     gene            complement(4506..5297)
                     /locus_tag="VHN20_05680"
     CDS             complement(4506..5297)
                     /locus_tag="VHN20_05680"
                     /EC_number="7.6.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003603352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2725291.1"
                     /translation="MAYLQIDQVGITFARGSAATEVLRDVSLKIEKGEYVSIIGHSGC
                     GKSTLLNIVAGLLRATTGGVLLENKEVNGPGPDRAVVFQNHSLLPWLTVYENVALAVE
                     KVSRARSRAERRDWIMHNLNLVHMAHARDKRPHEISGGMKQRVGIARALSMEPKILLL
                     DEPFGALDALTRAHLQDSVMEIHSQLGNTIIMITHDVDEAVLLSDRIVMMTNGPAAKI
                     GEVLNVRLPRPRRRLELVDDHSYNHTRAAVLEFLYARHRAPAIAA"
     gene            complement(5307..>5983)
                     /gene="ntrB"
                     /locus_tag="VHN20_05685"
     CDS             complement(5307..>5983)
                     /gene="ntrB"
                     /locus_tag="VHN20_05685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015952672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015414 - ABC-type nitrate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015706 - nitrate transmembrane transport
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="nitrate ABC transporter permease"
                     /protein_id="HEX2725292.1"
                     /translation="TSRVLSTSWELITQPFYDRGGLDKGLFWHLAASLQRVALGYALA
                     AIAGIALGTLVGQSVWALRGLDPVFQVLRTVPPLAWLPLSLAAFRDGQPAAIFVIFIT
                     AIWPIIINTAVGIRNIPQDYRNVAAVLRLNSLEFFWKIMLPSAAPYIFTGLRIGIGLS
                     WLAIVAAEMLIGGVGIGFFIWDAWNSSLIADIIVALVYVGLVGFVLDRIVALVAALVT
                     RGTAAA"
BASE COUNT          948 a         2047 c         2053 g          935 t
ORIGIN      
        1 ttctgcggcc cctcgcgcga ccaggcgagc gtgaggcggt tgagcaggcc cgcctctctc
       61 atggccgtga gctcgtcctt gtagaagaag tcggcgtcct ggcgctggtg gccgaagaac
      121 agccagttcc tgcctggcgc gccgacggcc cggcgttcgt gaagaaaggc acggaacggc
      181 gcaatgccgg tgccgggccc gaccataatg atcggcgttg ccggatcgct cggcagcgcg
      241 aagccgtgcg ccttctgcac atagaccttc agcgctgcac cgcgctcgag acgctcggcg
      301 aagaaggtcg acgcgacgcc gaagcgcagg cgcttgttga gggcatagcg caccgcgtcc
      361 accgtgagcg acacgcggcc ggggctggct ttcggggacg aggagatcga atagagccgc
      421 ggctgcagcg gttcgagcgt ttcgataaac gcttccgcat ccgggcgcgc acgcgggaac
      481 ttgtgcaagg ccgccagcac gtcgagctgg gcggcgtcgc cgtccggatc gtcgcccgcc
      541 gcgagcgcct gcgccttgcg ccgctcctcg ccgccggtca cgaacgaaat aagttggaac
      601 agcgcgtccg gcgccgatcc gagcgacgcc tcgccgagca gccgttcgcg caacgtcgtg
      661 tcgccgatca tgcgctcggg ccgtgcgccg agttgggcga tcaccgcgtc gacgagcgac
      721 gcggcgttga ccggaaacac gccgaggctg tcgccgacac catagtcgag cccactcccg
      781 ccgagatcga tgtcgatgtg ccacgtctcc ttctcggagc tcgcggcgtt gagccgacgg
      841 cgggcaatga acgttgcttc gaccggatgc tcgcgccacc gcccgcgcgc ttcgggcgcc
      901 acggccgtcg tcgaagccgc cccgaccaca gccggcgttg gcgcgcccgc cttcgcctca
      961 gccttggcgc cgtccagctc ctccgcaagc tttttcagca tgcgcaaggt gtccttgccg
     1021 ccgggcgcgc acaggttcag gcgttcttcc ttcttgagga acagcgcatt cgcgtagtcg
     1081 gcgcagctgt agccgcattg accgcaatcc tgctgcgcca tggcagccat caggcgcggc
     1141 gcgagggagc gcgcctccgc catcgtcatg cgcgtgtcga tcgcaagcga cgggtcgtgc
     1201 cacggtgcat ccccggcatc ggccagcggc gcggcttccg cgccaccggg cagcgcaatg
     1261 ccgtcgccga gcggcacggg catggcgttg gcatccgggg cgagcagcgc cgcgaaatat
     1321 ccggagagcc acgccctctg ctcggcggag aacggcgccg tctctggaat cagcagcgcc
     1381 ggcggcggcg cgtgcatggt catgccgccg cctcgtggag gtcgctcccg gcgcgctcgt
     1441 cagatgtcgg cgagcgcggt aaggtattgg agaggatcgc gcctgcatcc gcccccccac
     1501 cgtcccctcc gagcggggcg agactgttca ccagctcgcg cagcgcctcg atctcgtgcc
     1561 gcatcgtgaa ggcctggaag ctctcgtcgg gaccggttcg accggcgaga tagacgcgca
     1621 gtagtgcctc gatgcgcgcc gggcaatcgt cggccttgac gcccttccac agctcgcggc
     1681 cgatcctggc attggggccg aacccgccgc cgaccacgac gtcgtagcct tcaacggtgt
     1741 cgccgttctc gttgaccgcc accttcgcgc cgatcagccc gatgtcgccg atgtagtgct
     1801 gggcgcagga atggtggcac ccagtcaggt ggatgttcac cggcacgtcg agatcaaccc
     1861 taacctcgac gtgctcggca atcgtcaggg cgtggccctt ggtgtcgctt gccgcgaact
     1921 tgcagccgcg attgccggtg caggcgacga gcccggcgcg gatgctcgac gccttcgtcg
     1981 tcagcccgag cgcgccgatg cgcgcctccg cctcggcgac gtgcgcgtcg gccacgcccg
     2041 acaggatcag gttctgccag acggtcaggc ggatgtcccc gtcgccgcag gtctgtgcga
     2101 cggcagcgag tccacgcatc tgctcggtcg tgagcttccc gaccggcagc acgatgccga
     2161 tccagctgcg accagcctgc ttctgcgggt gcacgcctac atgcgcgaag cggtccgtgt
     2221 cgccccgtgg cgccagatgc tcgccgccga tgcgcgtgag cgggcgcccg agcttcccct
     2281 cgaccgcctc gaggaatcgc tcgaagcccc acgcatccag cacgtatttg agacgtgcct
     2341 tgttgcggtt cgtgcgatcg ccgttctcga tgaacacgcg cacgatcgcg tccgcaacgg
     2401 cgacgcagtc cttcggggag cagatcacgc cggtgtcgcg cgcgatgtcg tggtgtccgg
     2461 tgatgccgcc cagcaccacc cgcatccaca cgcccgccgc gacgggagcg ccctcgcgca
     2521 cctcgactgc ctggaaaccg atgtcgttgg tctcctcgag cacggggacg cgcccgccgc
     2581 cgtcgaaggc gacgttgaac ttgcgcggca acccgtaaag cgagcggtcg ttgaggatgt
     2641 ggaagtgcca ggcgcgtgcc ggtggccgcg tatcgatcag ttcctgcgga tcgatacccg
     2701 ccgtcggcga gccggtgacg ttgcggatgt tgtcggcgcc cgcacccttg ccgcagagcc
     2761 ccaggtcctg gatgccttcg aggaacggcg ctccgttctc ggcgacgatc tcgcggacct
     2821 gcagattggc gcgcgtcgtc acatgtgcgt aaccgccgcc gtaccggtcg gcgagatcgg
     2881 caaggccggc gaattgccag tgattgagaa tgccgttggc gatgcgcagc cggcacatga
     2941 aggaattttg cgccggtgcc acatagaaca gcccgtgata tcgccagcgg aaattgtcct
     3001 ccggcttcgg gtaatccccc tctcccgcct gttgggcgag ccgtccatag gcgtcgaagg
     3061 gatgctctgc tcgcttccac ttctcctgct cgctgagctt gccgccgccc gcaatgacct
     3121 tgtcctgcgc ttttgcgtgg accgcatcgg ggccggtcgg cacggatgcg cctggcgttc
     3181 cggcgcgcgc gaggccgccc gtgctgcgcg cgaccgccac gccggcggcg agaccctcga
     3241 ggtagcgttt ctgctcggcc gagaaatcgg gcatcgcctg cctcacgcgg ccgagcgttc
     3301 ggcgaaggac cggccgaaca tgagatggtt gcggaacggg cggatcgagg cgcccgaccg
     3361 gatcaggtcg agataccagg cgctttccgc cacgtcgccg acgagaagcg ccccgacgag
     3421 gcggtcgtcg cgcacgacga gcttgcgata ggccgccgcg cccggatcgg tgaacacgat
     3481 ggtgttgtcg ttgtcgtgga tgtcgcccgc cgagaacacc ggcacgccgg acaccttcag
     3541 gctggtggcc ggcacgctgc cttcgtagag caggttggcc tgcccgaggc ggcgggcgag
     3601 gatgtcggcc tgctcgtagg cggggtcgac cagcccgtgg gcgatgccgc ggtgctcggc
     3661 gcattccccg atcgcgtaga tgcctggcac ggaggtctcg agcgcgtcat cgatggcgac
     3721 gccgcgacga acctctagcc ccgctgcgcg ggcgagatcg gtggccgggc gcacaccgac
     3781 ggccacgacg acgagatccg ccggaatgag acggccgtcc gcgagttgaa ctcctagtag
     3841 ccgcgaatcg ccttcgaccg ccgcggtgtc ggcctcgagc agcacgcgga tgccacggcg
     3901 ctcggtagcc gccttgacga gaccggcggc acgggcatcg agctgccgtt ccatgaggcg
     3961 atccatgacg tgcacgagcg tcgtttcgac gccgtagcgc acgagcccga acgcagcctc
     4021 cagaccaaga agcccgccgc cgatcaccac ggcgcgcgtg cccggccggg cagcggcccg
     4081 gatggcggcc acgtcggcga gatcgcggaa cgtcatcacg ccgggcaggt ccatgcccgg
     4141 cttcgccagc cggatcgggg tcgaacccgt ggcgagcacg agtcggtcga acggcaggag
     4201 cgtgaggtcc cccacccgga cctcacgctc cgccgcatcg atcgccgttg ccggcgcacc
     4261 ggtgataagc cggacgccgt gctggagata ccagcggcgt tcgcgaaacc ggcagctctc
     4321 ctcgtcgacc tcctgggcca ggagcgacga gagcagcacc cggttgtagg cgggcgatgc
     4381 ctcggcgccg accacggtca cgtcgaagcg gtccggggcg tgcgtgccca ggcgctcgag
     4441 gaagcgcaat cctgccatgc cgttgccgat gacgacgagg cgttcgcgat gcatcgcgcc
     4501 cgctctcatg cggcgatcgc cggcgcgcgg tggcgcgcat agaggaattc gagcacggcc
     4561 gcacgcgtat ggttgtaact gtggtcgtcg acgagctcga gacggcgacg tggccgcggc
     4621 agccgcacgt tcagaacctc accgatcttc gcggccgggc cgttggtcat catcacgatg
     4681 cggtccgaaa gcaggaccgc ctcgtcgacg tcgtgggtga tcatgatgat cgtgttgccg
     4741 agctggctgt ggatctccat gaccgaatct tgcagatgcg cccgcgtcaa cgcgtcgagg
     4801 gcgccgaagg gctcgtcgag aagcaggatc ttcggctcca tggacaaggc gcgcgcgatg
     4861 ccgacgcgct gcttcatgcc gcccgagatt tcgtgcgggc gcttgtccct ggcatgggcc
     4921 atatgcacca gattgaggtt gtgcatgatc cagtcgcgcc gctcggcccg gctgcgggcg
     4981 cgcgacacct tctcgacggc cagcgcgacg ttctcgtaga ccgtcagcca cgggagcagg
     5041 gagtggttct ggaacacgac ggcgcggtcg gggccgggcc cgttcacctc cttgttctcg
     5101 agcagcacgc cgccggtcgt cgccctgagc aggccggcga cgatgttgag cagggtggac
     5161 ttgccgcagc cggaatggcc gatgatcgag acgtattcgc ccttctcgat cttcaggctc
     5221 acgtcgcgca gcacctcggt cgcggcgctg ccgcgcgcga aggtgattcc gacctggtcg
     5281 atctggagat atgccattgc cagcccctat gctgccgccg tgccgcgggt gacgagcgcg
     5341 gcgaccaacg cgacaatgcg gtcgagcacg aagccgacga gccccacata gacgagcgcc
     5401 acgatgatgt cggcgatcag cgacgagttc cacgcgtccc agatgaagaa gccgatcccg
     5461 acgcccccga tcagcatctc ggcggcgacg atcgccagcc agctgaggcc gatgccgatg
     5521 cgcagaccgg tgaagatgta cggcgctgct gacggcagca tgatcttcca gaagaactcg
     5581 aggctgttga gccgcagcac ggcggcgacg ttgcggtaat cctgcgggat gttgcggatg
     5641 ccgacggcag tgttgatgat gattggccag atcgccgtga tgaagatcac gaagatggcg
     5701 gccggctgcc cgtcgcggaa cgcggccagg gacagcggca gccacgcgag cggcggcacc
     5761 gtgcgcagga cctggaagac cggatcgagc ccgcgcaacg cccacaccga ttgtccgacc
     5821 agagtgccga gcgcgatccc ggcaatcgcc gcgagcgcgt agccgagagc gacccgctgc
     5881 aggctcgctg caagatgcca gaacaggcct ttgtcgagac cgccgcggtc atagaaaggt
     5941 tgcgtgatca gctcccacga cgtgctcagg acgcgcgagg tcg
//
LOCUS       DATAIQ010000333         1597 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_146884, whole genome shotgun sequence.
ACCESSION   DATAIQ010000333 DATAIQ010000000
VERSION     DATAIQ010000333.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1597)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1597)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1597
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_146884"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(198..494)
                     /locus_tag="VHN20_05690"
     CDS             complement(198..494)
                     /locus_tag="VHN20_05690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011316212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725293.1"
                     /translation="MIDITPTGTGDPMTFRVAVRTDGSESRHDVKLSRADYDRFTGGR
                     RSPEQCIDAAFRFLLDREPKEAILATFDVAVISRYFPEFERELAGYMSSPRGSS"
     gene            complement(527..>1597)
                     /locus_tag="VHN20_05695"
     CDS             complement(527..>1597)
                     /locus_tag="VHN20_05695"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010973447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HEX2725294.1"
                     /translation="NIARLRERAETFGVALRPHLKTIKSVDIARRLLPGNGPATVSTL
                     REAEVFFEAGITDIFYAVGIAPQKLPRVAALRAAGCDLTILLDSSEQADAVVAASTAG
                     GPPIPVLIEIDCDGHRGGLAPDDDALIAIGRKLQDGGATLKGVMTHGGGSYAFIGTDA
                     HAAFAEQESGAVRMAARRLRQAGLPCPVVSVGSTPTASAARNLDGITEMRPGVYVFFD
                     LVMAGLGVCAVDDIALSVLTTVIGHQRPRGWILVDAGWMAMSRDRGTASHEVDQGYGV
                     VCDADGRVIPDLIVANANQEHGIVALRPRSRETLPDLPVGTRLRILPNHACATAAQFD
                     AYDVIPAAPGAPLMRWPRFGGW"
BASE COUNT          259 a          540 c          554 g          244 t
ORIGIN      
        1 aagacaatga gacactggat cacctccttc cgttgtgttg atcggaatgc ccaatgtagg
       61 agcctgcgcg cacgctgcaa gggcgcggcc gataatcgac atccgatcct gtggacgcga
      121 agcctcgcgg aggatcagcg atcccggcgc ccccccccgg tcaaggctca acggcaaccg
      181 tggcgacgag tacctgctca tgacgagcct cggggtgatg acatgtagcc cgccaactcg
      241 cgttcgaact cggggaagta gcgcgagatg accgcgacgt cgaatgtcgc gaggatcgcc
      301 tccttcggct cgcggtcgag aaggaagcgg aatgcggcgt cgatgcactg ctccgggctg
      361 cgccgccctc ccgtgaagcg gtcgtaatcg gcgcgcgaga gtttcacgtc gtgccggctc
      421 tcgctcccgt ccgtgcgcac ggcaacgcgg aacgtcattg ggtcgcccgt tccggtcggc
      481 gtgatgtcga tcatgtccgg ctccccacga cgacgcctgc agcacgctac cagccgccga
      541 agcggggcca gcgcatcaag ggcgcacccg gtgcagcggg gatgacgtcg taggcgtcga
      601 actgagcggc cgttgcgcag gcgtggtttg gcaggatgcg cagccgcgtg ccgaccggca
      661 gatccggaag ggtttcgcgg ctgcgggggc gaagggcgac gatgccgtgt tcctggttgg
      721 cgttggcaac gatcagatcg ggaatgacgc ggccgtcggc atcgcagacg acgccgtaac
      781 cctggtcgac ctcgtgactc gcggtgccgc ggtcccggga catggccatc cagccggcgt
      841 cgaccaggat ccagccgcgc ggacgctggt gcccgatgac ggtggtcagc accgacaggg
      901 caatgtcgtc gaccgcgcag acgccgagcc ctgccatgac caggtcgaag aagacgtaga
      961 cgcccggccg catctcggtg atgccgtcga ggttgcgggc ggcgctggca gtcggcgtcg
     1021 agccgacgct gacaaccggg caaggcaggc ccgcctggcg cagccgtcgg gccgccatcc
     1081 tcacggcgcc gctctcctgc tcggcaaagg ccgcgtgcgc gtcggtgccg ataaaagcgt
     1141 agctcccgcc gccgtgcgtc atgacgccct tcagcgttgc tccgccgtct tgcagtttgc
     1201 gtccgatcgc gatcagcgca tcgtcatccg gcgcgagccc tccgcggtgg ccgtcgcagt
     1261 cgatctcgat caggaccggg atcggtgggc cgcccgcggt ggacgccgcg accacggcgt
     1321 cggcctgctc ggatgaatcc aggagaatcg tcaggtcgca gccggcggcg cgcagcgcag
     1381 ccaccctggg cagcttctgc ggcgcgatgc ccactgcgta gaagatgtcc gtgatccccg
     1441 cctcgaagaa aacctccgcc tcgcgcagcg tcgacaccgt cgccggaccg ttccccggga
     1501 gcaagcggcg cgcgatgtcg accgacttga tggtcttgag gtgcgggcgc agagcgaccc
     1561 cgaacgtctc cgcgcgctcg cgcaagcgcg cgatgtt
//
LOCUS       DATAIQ010000334         3191 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_433021, whole genome shotgun sequence.
ACCESSION   DATAIQ010000334 DATAIQ010000000
VERSION     DATAIQ010000334.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3191)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3191)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3191
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_433021"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..808
                     /locus_tag="VHN20_05700"
     CDS             <1..808
                     /locus_tag="VHN20_05700"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2725295.1"
                     /translation="YAIWPHMTVFDNVAFSFRVRGISREKARPAVERALALVDLAGFA
                     ERPATKLSGGQQQRVALARAIAFESKVILLDEPLSNLDAQLRIAMRAELAALRERLGL
                     TAIYVTHDQEEAFALSDRIIVMRAGRIEQEGTPDEIHSSPRSRFVAAFLGMKNIFDAS
                     LAPAGNGAVEARLADELVMKARAPSGLDQTTAAVSFRPIDVRLTTEDAAGQGAQGIIT
                     RRLFLGDLVHYYVQSAGLEICACDRPRSELAEGRTVHWRVDPERCLVLKD"
     gene            851..2257
                     /locus_tag="VHN20_05705"
     CDS             851..2257
                     /locus_tag="VHN20_05705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyclic terpene utilization AtuA family protein"
                     /protein_id="HEX2725296.1"
                     /translation="MNVAVPPTGRGGAIANRGLRILCPNGHLGFAPTREGSFNLGVAA
                     EPDIIACDSGSSDCGPVPLGSDTSTSPLAWQTHDIELMLLAARRLGVPMMIGSAGDTG
                     TNSRVDRYVGIVRELAEKHQLPRFKLGYFYSEVSRDVVRRKIEAGDTIKGLDARPDLT
                     LADLEATDRIVAVAGVHPFMKLLDMGADVIIGGRGSDCAIFAAPAIRQGYPEALAYYY
                     GKVMECASFCAEPYGGKESVMGEITMGDVKVTAMLPEQRCTVASVAAHAMYERSSPYY
                     EYFLGGHIDMHDCVYEQFDERTTRVTGPRFVQAGELRVKLEGAGKVGERFVGLVGVRD
                     PYTISRIDDVIGWAREQVRARFGDNGYQLTFNVYGRDGVMGDLEPLRHQPSHELCVVV
                     QGVAPTKEMAEEVCLTGFRQMFYARLPDVKGSAGGVAFILDEVLQASPAYRWTINHTM
                     RIDDPLELFPVHLVEAGV"
     gene            2262..2594
                     /locus_tag="VHN20_05710"
     CDS             2262..2594
                     /locus_tag="VHN20_05710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4387 domain-containing protein"
                     /protein_id="HEX2725297.1"
                     /translation="MPVQATIPLTHLAKTIRSKNAGVDKITFDIVFKDREGYELVRRC
                     GVLSRDAVRQIFGIPDSRISDHVEFDPALAIKFSIYRNRPSGSLGDGDIFGSQQYGPL
                     LGIQVPTA"
     gene            2624..>3191
                     /locus_tag="VHN20_05715"
     CDS             2624..>3191
                     /locus_tag="VHN20_05715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007597303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipase"
                     /protein_id="HEX2725298.1"
                     /translation="MELHWVTVWAGPAQGPYPVGNPLLQPDLSFAFPAPEQGAADQTF
                     RLMVAPSLWGVRARIRLSNAFGPKPVTFSDAFIGVQRESASLVGGSNRRLTFNGARQV
                     TVSPGDSIWSDGVDMDARWPSVSMLSRRLAVSFCVRGASGPMTWHAKALTTSYVSRPG
                     SGPCGELEDEAAFPYATSSWFFLDALDMA"
BASE COUNT          522 a         1060 c         1038 g          571 t
ORIGIN      
        1 ctatgcgatc tggccgcaca tgaccgtctt cgacaacgtc gccttctcct tccgggtgcg
       61 cggcatctcg cgtgagaagg cgcgtcccgc cgtggagcgg gcgctcgcgc tggtcgatct
      121 cgctggtttc gccgagcggc cggcgaccaa actgtccggc ggccagcagc agcgcgtcgc
      181 gctggcccgc gccatcgcct tcgagtcgaa ggtgatcctg ctcgacgagc cgctcagcaa
      241 tctcgacgcg cagctgcgca tcgccatgcg cgccgagctg gcggcgttgc gcgagcggct
      301 cggcctcacc gcaatttacg tcacccacga tcaggaggaa gccttcgcgc tgtcggaccg
      361 catcatcgtc atgcgcgcag ggcggatcga gcaggaggga acgccggacg agattcactc
      421 ctcgccccgc agccgcttcg ttgcggcgtt tctcggcatg aagaacattt tcgacgcaag
      481 ccttgcgccg gccggcaacg gagcggtcga agcgcgtctc gccgacgaac tggtgatgaa
      541 agcccgcgca ccctccggcc tggatcagac gacggccgcg gtctcgtttc ggccgatcga
      601 cgtgcgcctg acgacggagg atgcggcagg ccagggagcc caaggaatca tcacgcgacg
      661 cctcttcctc ggcgatctcg tccactacta cgtgcagtcc gccgggctcg agatttgtgc
      721 ctgcgaccgt ccgcgttcgg aactcgccga aggacggacc gtgcactggc gcgttgatcc
      781 cgagcgttgc ctcgtcctca aggattgaac ccatgcttgc gcgagcccac cgtcaagagg
      841 agttccgccc atgaatgtcg ccgttccgcc gaccggacgt ggcggcgcga tcgccaatcg
      901 cggcctgcgc atcctgtgcc cgaacggcca tctcggcttc gcgccgacgc gggaaggaag
      961 cttcaatctc ggcgtcgccg ccgagccgga cataatcgcc tgtgactccg gcagcagcga
     1021 ttgcgggccg gtgcccctgg gctcggatac atcgaccagc ccgctggcgt ggcagacgca
     1081 cgatatcgag ctcatgctgc tcgcggcgcg ccggctgggc gtgccgatga tgatcggctc
     1141 tgccggcgac acgggcacga acagccgtgt cgaccgctac gtcggcatcg ttcgcgagct
     1201 cgccgagaaa caccaattgc cgcgcttcaa gctcggctat ttctattcag aggtgtcgcg
     1261 cgatgtcgtc cgccgcaaga tcgaggccgg cgacaccatc aaggggctgg acgcgcgtcc
     1321 cgacctgacg ctggccgacc tcgaggcgac cgaccgcatc gtggccgtgg cgggcgtgca
     1381 tccgttcatg aagctgctcg acatgggcgc cgatgtcatc atcggcggcc ggggcagcga
     1441 ttgcgcgatc ttcgccgcgc cggcgatccg gcagggctat ccggaggctc tcgcatacta
     1501 ttacggcaag gtgatggagt gcgcctcgtt ctgcgccgag ccctacggcg gcaaggaatc
     1561 ggtgatgggc gagatcacca tgggggacgt gaaggtcaca gccatgctgc cggagcagcg
     1621 ctgtaccgtc gcctctgttg cggcgcacgc gatgtacgaa cgttcgagcc cgtattacga
     1681 gtatttcctc ggcggccaca tcgacatgca tgactgcgtt tacgaacagt tcgacgagcg
     1741 cacaacgcgc gtcaccggcc cccgcttcgt tcaggctggc gagctgcgcg tgaagctcga
     1801 gggcgccggc aaggtcggcg agcgcttcgt cgggctggtc ggcgtgcgcg acccctatac
     1861 gatttcacgc atcgacgacg tgatcgggtg ggcccgcgag caggtgcgcg cacgcttcgg
     1921 cgacaacggc taccagctca cctttaacgt ctatggccgc gacggcgtca tgggtgacct
     1981 cgagcccttg cgccatcagc cctcgcatga gctgtgcgtc gtcgtgcaag gcgtcgcccc
     2041 gaccaaggag atggccgagg aggtctgcct gactggcttc cggcagatgt tttacgcccg
     2101 tttgccagac gtgaagggca gcgccggggg cgtcgctttt atcctcgacg aggtgctgca
     2161 ggcgagcccc gcttaccgct ggaccatcaa tcacaccatg cgcatcgatg atcccctcga
     2221 gctcttcccc gtccacctcg ttgaggcggg agtctgatgt catgccggtg caagccacga
     2281 tcccgctgac tcacctcgcc aagactatcc gcagcaagaa tgccggcgtc gacaagatca
     2341 cctttgatat cgtcttcaaa gatcgcgaag gttacgagct ggtgcgacgc tgcggcgtgc
     2401 tttcccgcga cgcggtgcgg cagatcttcg gcattcccga ttcgcggatc agcgatcacg
     2461 tcgagttcga tccggccctg gccataaaat tcagcatcta ccgcaaccgg ccgagcggca
     2521 gccttggcga cggcgacatt ttcggtagcc agcaatatgg cccgttgctc ggcatccagg
     2581 tgccgacggc atgatgagac gaggactttc cgggagcgta cccatggagc tgcattgggt
     2641 gaccgtctgg gccggacccg cgcagggtcc gtatccggtt ggcaacccgc tgcttcagcc
     2701 cgacctgagc ttcgcctttc cggcgcccga acagggcgcc gccgaccaga cgttccgcct
     2761 gatggtcgcg cccagcctgt ggggcgttcg cgcacgcatt cgtttgtcga acgccttcgg
     2821 ccccaagccg gtgacctttt cggacgcatt catcggcgtg caacgcgaaa gcgcctcgct
     2881 cgtgggcggg agcaaccggc ggctcacgtt caacggcgct cggcaggtga ccgtgtcgcc
     2941 tggagattcg atctggagcg acggcgtcga catggacgca aggtggccga gcgtgtcgat
     3001 gctgagccga aggctcgctg tgagcttttg cgtgcgaggc gcatccggcc cgatgacgtg
     3061 gcacgccaag gccctgacga cgtcttatgt gtcccggccc ggctccggcc cgtgcggcga
     3121 attggaggac gaggcagcgt ttccatatgc gacgtcgtcc tggttcttcc tcgatgcgct
     3181 ggacatggcc a
//
LOCUS       DATAIQ010000335         2021 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_386843, whole genome shotgun sequence.
ACCESSION   DATAIQ010000335 DATAIQ010000000
VERSION     DATAIQ010000335.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2021)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2021)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2021
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_386843"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..418)
                     /locus_tag="VHN20_05720"
     CDS             complement(<1..418)
                     /locus_tag="VHN20_05720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015952465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglucosamine-6-phosphate deacetylase"
                     /protein_id="HEX2725299.1"
                     /translation="MSLSDRHALAADFVFDGETLREDHAIVIDGAAIAAVVPRRELPA
                     AMAVRHMRPGAWLAPGFIDVQVNGGGDILFNDEPTPEGIAAIAAAHRKFGTTALLPTL
                     ISDTPDKMQAALAAAQRVVGVHPGILGIHLEGPFLSP"
     gene            complement(415..1425)
                     /locus_tag="VHN20_05725"
     CDS             complement(415..1425)
                     /locus_tag="VHN20_05725"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018406894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0097367 - carbohydrate derivative binding
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HEX2725300.1"
                     /translation="MLAEIREAPEAVAHQAAALAGPLAELVRRLGRQPPRVAVTCARG
                     SSAHAATFGKHLIERYLGIPVAAAAPNIGTVYGRSVQLEGQLFLAISQSGRSDDLVDQ
                     MRRARADGAITAAIVNATDSPLAEASEIVLPMQAGPERSVAATKSFIASATALLRLAA
                     LWTADAAMAASVDRLPARLAAATDLDWPEAVQRLRGAASLVAIGRGPTLAIAREAALK
                     LKETCNVHAEAFSGAEFLHGPVALVDELYPILMFVPTDAAQAGLRQLATDLHGKGAAL
                     LVAEPGAPAPGRLPSLDADHPEADAICMIQSFYGMVERLAALRGVDVDRPRHLQKVTR
                     TR"
     gene            1599..>2021
                     /locus_tag="VHN20_05730"
     CDS             1599..>2021
                     /locus_tag="VHN20_05730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013420995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramic acid 6-phosphate etherase"
                     /protein_id="HEX2725301.1"
                     /translation="MSTEIVSPRFRGIDAWEPAEVLEALMEGQLAAVAAVRAARRPIE
                     AAAVAMEARLREGGRLVYAGAGTSGRLAAQDGAELTPTFSWPQARVLTLLAGGEEALT
                     QAVEGAEDQAETGAALVRKHMLGANDVLIALAASGTTPF"
BASE COUNT          291 a          693 c          748 g          289 t
ORIGIN      
        1 cgggcgacag gaacgggccc tcgaggtgaa tgccgagaat gccggggtgc acgccgacca
       61 cgcgctgcgc ggccgcgagc gctgcctgca ttttgtccgg cgtgtcgctg atcagcgtcg
      121 gcagcagcgc cgtcgtgccg aacttgcgat gcgcggcggc gatggcggcg atgccctccg
      181 gcgtcggctc gtcgttgaac aggatgtcgc cgccgccatt gacctgcacg tcgatgaatc
      241 caggcgcaag ccacgcaccg gggcgcatgt ggcgcacggc cattgcggcg ggcagctcgc
      301 ggcgcggtac gacggcggcg atcgcggcgc cgtcgatcac gatggcgtgg tcctcgcgca
      361 gcgtctcgcc gtcgaagacg aaatcggcgg cgagcgcgtg ccgatcggaa aggctcatcg
      421 tgtcctcgtg accttctgca aatggcgcgg gcggtcgacg tcgacgccgc gcagggccgc
      481 cagccgctcg accatgccgt agaagctctg gatcatacag atcgcgtcgg cttccggatg
      541 atcggcgtcg aggctcggga gccggccagg cgcgggcgcg cctggctcgg caacgagcag
      601 cgccgcgccc ttgccatgca ggtcagtcgc gagctggcga agtccggctt gcgccgcgtc
      661 ggtcggcacg aacatcaaaa tcggataaag ctcgtcgacc agcgccaccg ggccgtgcag
      721 gaactcggcg ccgctgaagg cttcggcatg cacgttgcac gtctccttga gcttgagggc
      781 ggcttcgcgc gcgatcgcga gcgtggggcc gcgcccgatc gcgacaaggc tcgcggcgcc
      841 gcgcagacgc tgcaccgctt cgggccagtc gaggtctgtg gcggccgcaa gccgcgccgg
      901 caggcgatcg acggacgcgg ccatcgccgc gtcggccgtc cacagggcgg ccaggcgcag
      961 cagcgccgtc gccgaggcga tgaagctttt cgtggccgcg acgctgcgct ccggcccggc
     1021 ctgcatcggc agcacgatct cgctggcctc ggcgagggga ctgtcggtgg cgttgacgat
     1081 ggctgcggtg atggcgccgt cggctcgcgc gcgccgcatc tggtcgacca ggtcgtcgct
     1141 ccgcccggat tgcgagatgg cgagaaacag ctggccctcg agctgcacgg accgcccgta
     1201 gacggttccg atattcggcg ccgccgccgc gaccgggatg ccgagataac gttcgatcag
     1261 gtgcttgccg aaggtcgccg catgggcgga gctgccgcgc gcgcaggtga cggcaacgcg
     1321 cggcggctga cgcccgagcc gtctgacgag ctcggcgagc gggccggcga gcgccgcggc
     1381 ctgatgcgcc accgcctcgg gcgcctcccg gatctcggcc agcatatggc tgccgccttc
     1441 gggacggctg cccgctggag atggttcttg tggagcaata ggccgcgcct gcaccgacat
     1501 cctcccgatt cgccgccaaa tccctatctt ggaacagaga acctgatcgg aagtccggaa
     1561 gttctattgg aaaggcaatt tttcgcgttc gggctggaat gagcactgag atcgtgagcc
     1621 cccgcttcag gggcatcgac gcctgggagc cggccgaggt cctcgaggcc ctcatggagg
     1681 ggcagcttgc ggccgtggcc gccgtgcgcg ccgcgcgccg ccccatcgag gcggccgcgg
     1741 tcgcgatgga agcccgcctg cgcgagggcg gccggctggt ctatgccggc gcgggcacct
     1801 cggggcgtct cgccgcccag gacggcgccg agctgacccc caccttcagc tggccgcagg
     1861 cgcgggtgct gacgctgctg gcaggcggag aggaggcctt gacccaggct gtcgaaggcg
     1921 ccgaggacca ggccgagacc ggggccgcgc tcgtgcgcaa gcacatgctc ggggccaacg
     1981 acgtgctgat cgcgctcgcc gccagcggca cgacgccgtt c
//
LOCUS       DATAIQ010000336         1864 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_386871, whole genome shotgun sequence.
ACCESSION   DATAIQ010000336 DATAIQ010000000
VERSION     DATAIQ010000336.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1864)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1864)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1864
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_386871"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..623
                     /locus_tag="VHN20_05735"
     CDS             <1..623
                     /locus_tag="VHN20_05735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017486200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cell division FtsA domain-containing protein"
                     /protein_id="HEX2725302.1"
                     /translation="GGTTSIAVFAGGHIVHVDALAVGGHHVTMDIARGLTTRVTAAER
                     LKTLYGSAVTTSADDRDMIAVPQVDEDERDVPSHLPKTHLTRIIKPRIEEILELIRDR
                     LRNAGYAAQAGRRVILTGGASQLAGVPEVARRILQGQVRIGRPLGIKGLPEAAKGPGF
                     AAAVGLLVYPQVAHMEHFEPRSSGIFAGTGTDGYLSRVGRWIRESF"
     gene            722..>1864
                     /gene="ftsZ"
                     /locus_tag="VHN20_05740"
     CDS             722..>1864
                     /gene="ftsZ"
                     /locus_tag="VHN20_05740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012319318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HEX2725303.1"
                     /translation="MTISLQAPDIRELKPRITVFGAGGAGGNAVNNMIEAGLIGVEFV
                     VANTDAQALTSSKAERIIQMGLTVTQGLGAGSQPEVGRAAAEEVIDEIRDQLSGAHMV
                     FVTAGMGGGTGTGAAPVIARAARDMGILTVGVVTKPFQFEGVRRMRVAEAGVGELQQA
                     VDTLIVIPNQNLFRIANEKTTFADAFAMADQVLYSGVACITDLMVKEGLINLDFADVR
                     AIMRGMGKAMMGTGEASGEKRANRAAEAAIANPLLDDVSMKGARGLLISITGGRDLTL
                     YEVDEAATRIREEVDQDANIILGATFDESLEGIIRVSVVATGIDHALMAKAPDVAATE
                     QRIAEVAERLRAEARARVTPVPAATPAVPAIRPAVHTEPVVPKPIAA"
BASE COUNT          313 a          614 c          656 g          281 t
ORIGIN      
        1 gcggcggcac cacgagcatc gccgtgttcg ccggtgggca catcgtccat gtcgatgcgc
       61 ttgcggtggg cggtcatcac gtcaccatgg acatcgcgcg cggcctcacc acgcgcgtca
      121 ccgcggcgga gcgcctcaag acgctttacg gctcggcggt cacgaccagc gccgacgacc
      181 gcgacatgat cgccgtgccg caggtcgacg aagacgagcg cgacgtgccc agccatctgc
      241 cgaagacgca cctgacgcgc atcatcaagc cgcgcatcga ggagattctg gaattgatcc
      301 gggatcgtct ccggaatgcc ggctacgccg cgcaggcggg ccggcgcgtg attttgaccg
      361 gtggcgccag tcaactcgcc ggcgttcccg aggttgcgcg gcgcattctg caggggcagg
      421 tgcggatcgg gcgcccactc ggcatcaaag gtctgcccga agcggccaag gggccgggtt
      481 tcgcggcggc cgttggcctt ctggtgtacc cgcaggtcgc gcatatggag cacttcgagc
      541 cacgctccag cggaattttc gctggcacgg gcaccgacgg ctacctgtca cgggtcggtc
      601 gttggattcg ggaaagtttt tgagagtaag gcaggggggt gactcggccg ccggcgctcc
      661 gcgaggggaa agagcgcaag ccgggcacca cagagaaaag ggttacgaga ggggctaggt
      721 catgaccatc agtttgcaag ctccggacat ccgggaactc aagccgcgca tcaccgtctt
      781 cggtgccggc ggcgccggcg gcaacgcggt caacaacatg atcgaggcgg gcctcatcgg
      841 cgttgaattc gtcgtcgcca ataccgacgc ccaggcgctc acgtcgtcga aggcggagcg
      901 catcatccag atgggcctga ccgtcacgca gggcctcggc gccggttcgc agccggaggt
      961 cgggcgcgcg gccgccgagg aagtgatcga cgagatccgt gatcagctgt ccggcgcgca
     1021 tatggtgttc gtcacggctg gcatgggcgg cggcaccggc acgggcgccg cgccggtgat
     1081 cgcgcgtgcc gcgcgcgaca tgggcatcct caccgtcggg gtggtgacca agccgttcca
     1141 gttcgagggc gtgcggcgca tgcgcgtcgc cgaggcgggg gtcggcgagc tgcagcaggc
     1201 cgtcgacacc ctgatcgtga tccccaacca gaacttgttc cgcattgcca acgagaagac
     1261 caccttcgcc gacgccttcg cgatggccga ccaggtgctt tactccggcg tcgcctgcat
     1321 caccgacctg atggtcaagg aaggcctgat caatctcgat ttcgccgacg tgcgcgccat
     1381 catgcgcggc atgggcaagg ccatgatggg cacgggcgag gcgtccggcg agaagcgcgc
     1441 caaccgcgcc gccgaggctg ccatcgccaa cccgctgctc gacgacgtct cgatgaaggg
     1501 cgcgcgcggc ctgttgatct cgatcaccgg cggccgcgac ctgacgctct atgaagtcga
     1561 cgaggcggcc acgcgcattc gcgaagaggt cgatcaggat gccaacatca tcctcggagc
     1621 gaccttcgac gagagcctcg aaggcatcat ccgggtctcg gtcgtcgcga ccggaatcga
     1681 tcacgccctc atggccaagg cgccggacgt cgcggcgacc gagcagcgca tcgccgaggt
     1741 tgcggagcgc ttgcgggccg aggcgcgtgc gcgggtcacg cccgtgccgg cggcaacgcc
     1801 ggccgtgccg gcgattcggc cggccgtgca cacggagcct gttgtgccga agccgattgc
     1861 ggcg
//
LOCUS       DATAIQ010000337         1848 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_386917, whole genome shotgun sequence.
ACCESSION   DATAIQ010000337 DATAIQ010000000
VERSION     DATAIQ010000337.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1848)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1848)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1848
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_386917"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1011
                     /locus_tag="VHN20_05745"
     CDS             <1..1011
                     /locus_tag="VHN20_05745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEX2725304.1"
                     /translation="IVGAGPVGPFEVFELGLLDIKTQLVDILPKIGGQCAELYPEKPI
                     YDIPGFPLITGQGLVDNLLRQIEPFHPTFHLGEMVEGVETLGTAEAPRFRVSTDAGQT
                     FLCKAILIAAGGGSFQPKKPPIENIDAYENTGVFYAVRKMEAFRDRRVLIVGGGDSAL
                     DWTLNLHPLAKRLTLLHRRDAFRAAPDSVNKMRALVGDKAMDLELGQVIALKGPAPQL
                     EAAVVRRDDGSTFEVPCDVLLPFFGLTMKLGPIAGWGLNLHENLIPVDTEKFETSVPG
                     IFAIGDINTYPGKLKLILSGFHEAALAAQKVHRYVYPEKKLTFQYTTSSTSLQKKLGV
                     AA"
     gene            1088..1834
                     /locus_tag="VHN20_05750"
     CDS             1088..1834
                     /locus_tag="VHN20_05750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007592336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX2725305.1"
                     /translation="MNQIDLNGHVAIVTGGAQGIGQAVVERFAASGATVEIWDIDGDL
                     AEETAAEVGEMVTARAVDVTDPDAVMRAVKATEGQYGPIDILVTSAGIAGPNTKTWDY
                     PIADWARIMRINVDGTFNCCRAVVPSMIAQGYGRIVTIASIAGKEGNPNASAYSASKA
                     SVIALTKSLGKELASYDIAVNTVTPAAARTRIFDQMSEEHIDFMLSRIPRGRFVETRE
                     IAAMVAWLASAENSFTTGAVFDLSGGRATY"
BASE COUNT          340 a          628 c          594 g          286 t
ORIGIN      
        1 atcgtgggag cggggcccgt cggcccgttc gaggtgttcg agctcggcct tctcgacatc
       61 aagacccagc tcgtcgacat cctgcccaag atcggtggcc aatgcgccga gctgtatccg
      121 gagaagccaa tctacgacat cccgggattc ccgctgatca ccggccaggg gctcgtcgac
      181 aacctgctcc ggcagatcga accattccac cccaccttcc acctcggcga gatggtcgag
      241 ggcgtcgaga cgctgggaac ggcggaggcg ccgcggttcc gggtcagcac ggatgccggc
      301 cagaccttct tgtgcaaggc catcctcatc gccgccggcg gcggctcgtt ccagccgaag
      361 aagccaccaa tcgagaatat cgacgcctac gagaacaccg gcgtgtttta cgcggtgcgc
      421 aagatggagg cgttccggga ccggcgcgtc ctgatcgtcg ggggcggcga ctcggccctc
      481 gactggaccc tgaacctgca cccgctggcc aagcggctga cgctgctgca tcgccgtgat
      541 gccttccggg ccgcgccgga cagcgtcaac aagatgcgcg ccctggtcgg cgacaaggcc
      601 atggacctgg aactcggaca ggtgatcgcg ctcaaaggcc cggcgccgca gctcgaggcg
      661 gcggtcgtgc gccgcgacga cggctccacc ttcgaggtgc cctgcgatgt cctgctgccg
      721 ttcttcggcc tgacgatgaa gctcgggccg atcgccggct gggggctgaa cctgcacgag
      781 aacctgatcc cggtggacac cgagaaattc gagacgagcg tcccgggcat cttcgcgatc
      841 ggcgacatca acacctatcc cggcaagctc aagctgatcc tgtccgggtt ccacgaggcg
      901 gccctcgccg cgcaaaaggt ccaccgctac gtctatccgg agaagaagct gacgttccag
      961 tacacgacct cgtcgaccag cctgcagaaa aagctcggcg tcgcggcgta atctccttcc
     1021 ccttagggga gggatgatga ctacgcgcag gttttcgtta ccttaggctc cgtcagcgga
     1081 gccggacatg aaccagatcg acctcaacgg gcacgtcgcc atcgtcacgg gcggcgcgca
     1141 gggcatcgga caggccgtcg tcgagcgttt tgccgcgagc ggcgccaccg tcgagatctg
     1201 ggacatcgac ggcgatctcg ccgaggagac ggcggccgag gtcggcgaga tggtgacggc
     1261 acgggccgtc gacgtcaccg acccggatgc ggtgatgcgc gccgtcaagg ccaccgaggg
     1321 ccaatacggg ccgatcgaca ttttggtgac gagcgccggc atcgccggcc ccaacaccaa
     1381 gacctgggac tatccgatcg ccgactgggc gcgcatcatg cgcatcaacg tggacggcac
     1441 cttcaactgc tgccgcgccg tggtgccgtc gatgatcgcg cagggctacg gacgcatcgt
     1501 caccatcgcc tcgatcgccg gcaaggaagg caacccgaac gcctccgcct attccgcctc
     1561 caaggcgtcc gtgatcgccc tgaccaaatc cctcggcaag gagctggcca gctacgacat
     1621 cgccgtcaac acggtgacgc cggcggcggc gcgcacgcgc atcttcgacc agatgagcga
     1681 ggagcatatc gacttcatgc tgtcgcgcat cccgcgcgga cgcttcgtcg agacgcgcga
     1741 gatcgccgcc atggtggcgt ggctagcgag cgccgagaac agcttcacga ccggagccgt
     1801 gttcgacctg tcgggaggac gcgcgaccta ctaaagcggg atccattc
//
LOCUS       DATAIQ010000338         1967 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_295151, whole genome shotgun sequence.
ACCESSION   DATAIQ010000338 DATAIQ010000000
VERSION     DATAIQ010000338.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1967)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1967)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1967
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_295151"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1167
                     /locus_tag="VHN20_05755"
     CDS             <1..1167
                     /locus_tag="VHN20_05755"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0035556 - intracellular signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEX2725306.1"
                     /translation="DDLATYRWIVTVNLTLAAVGLCVPLANRIHELAGGLLIIVSEPM
                     ALFALVSVLGRESGIQLNLIVGAAAPLIIFGLGRMALVMAVIALCFALHVAAWLLFPP
                     GKALLAIAPDLINQLYISSAFTTFTVIAALFYYAFRLTEQAEAQTEAVLRNILPDSIV
                     ERLKARPGEPIADSFADASVLFADLKGFVTLSRALGAERTVAMLNDLMHGFDALAATH
                     GVEKIKTIGDCYMAVAGVPEQVADHAARLARMALAMREVADETARRAGIDLSLRIGIA
                     SGPLMAGVIGARKFTYDVWGDPVNLAARLESTGEAGRIHVAAETRAKLADQFDFAHRG
                     AIDIKGVGPQETYFLIGSKPTDPKAPDPKAPDPKSPDPKSIDPKPSGRYPAAAA"
     gene            1164..1895
                     /gene="trmD"
                     /locus_tag="VHN20_05760"
     CDS             1164..1895
                     /gene="trmD"
                     /locus_tag="VHN20_05760"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019903221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052906 - tRNA
                     (guanine(37)-N1)-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HEX2725307.1"
                     /translation="MTAASPWRAAVLTLYPEMFPGPLGTSLSGDALARGLWALDARNI
                     RDHGLGRHRSVDDTPAGGGPGMVLRCDVLAAAIDAAVAPGDPRPTLLMSPRGRPLTQR
                     RVRALAAGPGVVIVCGRFEGVDERVIAARQLEEVSIGDYVLSGGEIAAMAVLDACVRL
                     LPGVMGKGASGTEESFEGNLLEYPHYTRPREWDGRAIPDVLLGGDHAAIARWRKAEAE
                     RLTRERRPDLLPPTAPDAADGRGGR"
BASE COUNT          279 a          727 c          666 g          295 t
ORIGIN      
        1 gacgacctcg ccacctaccg ctggatcgtc accgtcaatc tgaccctcgc ggccgtcggc
       61 ctgtgcgtgc cgctggccaa ccgcatccac gagctcgccg gcgggctgct gatcatcgtc
      121 tccgagccga tggcgctgtt cgccctcgtc agcgtgctcg ggcgcgagtc cgggatccag
      181 ctcaacctta tcgtcggcgc cgcagcgccg ctgatcatct tcggcctcgg ccgcatggct
      241 ctcgtcatgg ccgtcatcgc cctgtgcttc gcgctgcacg tggcggcgtg gctgctcttc
      301 ccgccgggca aggcgctgct ggccatcgct cccgacctga tcaaccagct ttacatatcg
      361 tcggcgttca cgacgttcac ggtcatcgcc gcgctgttct actacgcctt ccgcctgaca
      421 gagcaggccg aggcgcagac cgaggccgtg ctgcgcaaca tcctgccgga cagcatcgtc
      481 gagcggctca aggcgcgtcc cggcgagccg atcgccgaca gctttgccga cgcctcggtc
      541 ctgttcgcgg acctaaaagg cttcgtcacg ctgtcgcggg cgctcggcgc cgagcgcacg
      601 gtcgccatgc tcaacgacct catgcacggc ttcgacgcgc tcgccgccac gcacggcgtc
      661 gagaagatca agaccatcgg cgactgctac atggccgtgg cgggcgtgcc ggagcaagtc
      721 gccgatcatg ccgcgcgcct ggcgcgcatg gcgcttgcca tgcgcgaggt ggcggacgag
      781 accgcgcgac gcgccgggat tgacttgtcg ttgcgcatcg gcattgcctc tgggccgctc
      841 atggcagggg tcatcggtgc tcgcaaattc acgtatgacg tgtgggggga tccggtgaat
      901 ctggcggcgc ggctggagag caccggcgag gcgggccgca tccacgtggc ggcggaaacg
      961 cgggcgaagc tcgccgacca gttcgacttc gcccatcgcg gcgccatcga catcaagggc
     1021 gtcggcccgc aggagaccta ttttctgatc gggtcgaagc cgacggatcc caaggccccc
     1081 gaccccaagg cccccgatcc gaagtccccc gatccgaaat ccatcgatcc gaagcctagc
     1141 ggtcgctatc cggcagctgc cgcgtgaccg ccgcatcgcc ctggcgcgcc gccgtcctga
     1201 ccctctaccc ggagatgttc ccagggccgc tcggcacgtc cctgtccggc gacgccctcg
     1261 cgcgcggcct ctgggcgctc gatgccagga acatccgtga ccacggactc ggccggcacc
     1321 gctccgtcga cgacacgccg gcaggcggcg ggcccggcat ggtcctgcgc tgcgacgtgc
     1381 tcgccgccgc gatcgacgcc gcggttgcgc cgggcgaccc gcgcccgacc ctgctcatga
     1441 gcccgcgcgg gcgcccgctg acccagcgcc gggtgcgcgc gctcgcggcc gggccgggcg
     1501 tcgtcatcgt gtgcggccgc ttcgaaggcg tcgacgagcg ggtcatcgcc gcccggcaac
     1561 tcgaggaggt ctcgatcggc gactacgtgc tctcgggcgg cgagatcgcc gccatggccg
     1621 tgctggacgc ctgcgtgcgg ctgctccccg gggtgatggg caagggcgcc tccggcaccg
     1681 aggaaagctt cgaaggcaac ctgctcgagt atccgcacta tacccggccg cgcgagtggg
     1741 atgggcgggc tatccccgat gtgctcctcg gcggcgatca cgccgccatc gcccgctggc
     1801 gcaaggccga ggccgaacgc ctcacccgcg agcggcggcc ggacctgctc cccccgacgg
     1861 cgccagacgc cgcagacggc cggggaggcc gataaaaaaa gccttggcgg cttgcgtccg
     1921 accaaggctg agggggccgc cgcgggatgg aacgacggcg gcgtcac
//
LOCUS       DATAIQ010000339         1808 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_192654, whole genome shotgun sequence.
ACCESSION   DATAIQ010000339 DATAIQ010000000
VERSION     DATAIQ010000339.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1808)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1808)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1808
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_192654"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..447)
                     /locus_tag="VHN20_05765"
     CDS             complement(<1..447)
                     /locus_tag="VHN20_05765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725308.1"
                     /translation="MAVTVTGTHPKVVTVAVSTTTADTTYSASVASGTDRRYAFMDDI
                     VATVDATVNGAGLELVAIGPVPHAISLTNNAIVSSLTLSNQGLVELLNKSGPITYMGA
                     GDVVSYGAASEAIKIIGGTGNVTFKQTGGVLYADDAETVEINSTGNV"
     gene            697..1668
                     /locus_tag="VHN20_05770"
     CDS             697..1668
                     /locus_tag="VHN20_05770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725309.1"
                     /translation="MVRSSRATRGLVAVILMTSNSAQALAGQCGFRHAFSRPDERGTA
                     MVKVFRGDAVADLGNAPLLFITALKVNTDGTKISYHQDDPTGRRCQADPSATPCAINN
                     IQNAYSDLAKPVSAFTAVRDAGYPNPRTWQVLSPDIIEMNASTGKPCITPDGYLVSMT
                     ADVAVDDGRRRIGDCDPSKWIDALTAPAIVLPKRTRSRPSQFLDMGLRQRSLVVAVSR
                     SASKRVVPGIVGDLGPTNELGEASIAMNRDLNGLAATDQPKHRQDAINRFQAGRTAVL
                     LFPGTDFVLARPITGARIAEAGKDALAKFGGADKLYGCIRDEIDPAF"
BASE COUNT          274 a          624 c          621 g          289 t
ORIGIN      
        1 gacgttgccg gtcgagttga tctcgaccgt ctccgcgtcg tcggcgtaaa ggactccgcc
       61 cgtctgcttg aaggtgacgt tgccggttcc gccgatgatc ttgatcgcct cgctggccgc
      121 cccgtacgag accacgtcgc cggcgcccat ataggtgatc ggaccgctct tgttcaggag
      181 ctcgacgagg ccctggttgc tgagcgtcag cgagctgacg atcgcgttgt tggtgagcga
      241 gatcgcgtgc gggacggggc cgatggcgac gagctcgagg cctgccccgt tcaccgtcgc
      301 gtcgaccgtc gcgacgatgt cgtccatgaa cgcgtagcgc cggtcggtgc cggaggccac
      361 gctggctgaa taggtggtgt cggcggtcgt ggtcgagacg gcgaccgtga cgaccttggg
      421 gtgcgttcca gtgacggtga cggccatgac gggatcctcg tgacgctctg ctcagccccg
      481 gacgtcatcc cggatcgtcg cgcgcgcggt tgcgagttgg gcctcgccta tgcttcgccg
      541 cggggcgccg cgcacgctcg catgtcttaa cccgccgatc tttgcagcgg cgtgcgcccg
      601 ggcaccgcgc gcccggacag caggggatgt aagccgcttc acatatggaa gcagcgtcgt
      661 gccgtatgaa cgatgaggcg cataggggag gggagcatgg tgcggtcatc acgagcgacg
      721 cgcggtctcg tcgccgtcat tctcatgacg tcgaactcgg cgcaggcgct cgcggggcaa
      781 tgcgggttcc ggcacgcgtt cagccgcccc gacgagcgcg ggacggcgat ggtgaaggtc
      841 tttcgcggcg atgcggtcgc cgacttgggc aacgcgccgc tcctgttcat cacggcgctc
      901 aaggtcaaca ccgacggcac caagatctcg tatcaccagg acgacccgac cgggcgccgc
      961 tgccaggccg atccgtcggc gacgccgtgc gcgatcaaca acatccagaa cgcctacagc
     1021 gatctcgcga agcccgtgtc cgccttcacg gccgtgcgcg atgcgggcta tccgaacccg
     1081 cgcacgtggc aggtgctgag ccccgacatc atcgagatga acgccagcac cgggaagccg
     1141 tgcatcacgc cggacggcta tctcgtgtcg atgaccgccg acgtcgccgt cgacgacggc
     1201 cggcggcgca tcggcgactg tgatccgtcg aaatggatcg atgcgctgac cgcgccggcg
     1261 atcgtgctgc cgaaacggac ccgctcgcgc ccgtcgcaat tcctcgacat ggggcttcgc
     1321 cagcgcagcc tcgtcgtcgc agtctcgcgc agcgccagca aacgcgtggt gccgggcatc
     1381 gtcggcgatc tcgggcccac caacgagctc ggcgaggcga gcatcgccat gaaccgcgat
     1441 ctcaacggcc tcgccgcgac ggaccagccc aagcaccgcc aggacgccat caaccgtttc
     1501 caggccgggc gcacggccgt gctcctgttt ccgggcaccg acttcgtgct ggcgcggccc
     1561 atcaccggcg cgcgcatcgc cgaagccggc aaggacgcgc tcgccaaatt cggcggcgcc
     1621 gacaagctct acgggtgcat cagggacgag atcgacccgg cgttctgagg cggacggctt
     1681 cgccgcgcgg cgcgccgttg ctgcctccgt tagcgccgga gcttgcggcg cagcccgtgt
     1741 gcgggcgccc agggcggcgg cccgcggcgg cgcaccgcct tggccttcac gcgcttgtac
     1801 ctgctgta
//
LOCUS       DATAIQ010000340         3342 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_18150, whole genome shotgun sequence.
ACCESSION   DATAIQ010000340 DATAIQ010000000
VERSION     DATAIQ010000340.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3342)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3342)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3342
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18150"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1091)
                     /locus_tag="VHN20_05775"
     CDS             complement(<1..1091)
                     /locus_tag="VHN20_05775"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEX2725310.1"
                     /translation="MGEYPDRSQLQQIIAGITEGVILIEPDRAITAANEAALAMHGVR
                     TLDELGRSVDSYRENFKFTYRTKQATDAAPSPVERVVAGEVLEDVVVEVAHRARPRTD
                     WVHRIRSLVVTTADGLHDCWVLVITDVSAHLEAEERFERMFAANPAPAVICRLSDLRF
                     IKLNEGFLALTGFRREDVLGRSVYEVDILERAENRDLAIRCLRSGETIPQMEAALTLP
                     HDAERHVIVAGQPLELGAEPCMLFTFADLEDHYKAEVALQQSEERFAKSFRLSPVPTT
                     IGTLRDHRFVDANDAFLSVMGYGTEEVVGRTADDLRLWSDAERRRRFEADLAGSGSVR
                     GFEARFRPKGGREIDCLVSAEIVTINDER"
     gene            complement(1345..1596)
                     /locus_tag="VHN20_05780"
     CDS             complement(1345..1596)
                     /locus_tag="VHN20_05780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725311.1"
                     /translation="MDMRQVRGETIWEPEILSRMALDARRFMYGVKAPFDMPADIPDL
                     IDTIIVLDGAPFVIRGVTGSMPAKAIAKDDVIALLVRAL"
     gene            complement(1870..2115)
                     /locus_tag="VHN20_05785"
     CDS             complement(1870..2115)
                     /locus_tag="VHN20_05785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725312.1"
                     /translation="MMRESSLNYFQVRALKLTTDGRRPLIVTHEDWQRQPTHVRMLLN
                     ELRTLVAMGLMSREDLTDSKEAYNLLPAGRAILQHHD"
     gene            complement(2365..>3342)
                     /locus_tag="VHN20_05790"
     CDS             complement(2365..>3342)
                     /locus_tag="VHN20_05790"
                     /inference="COORDINATES: protein motif:HMM:NF012573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005509 - calcium ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HEX2725313.1"
                     /translation="GDDTYLVNSVGDTVLEVAGGGVDHIRSSVGFNLLATPAVENLTL
                     TGAASLSGTGNGLDNVLTGNSGANILSGLSGLDRLIGNAGNDTLLGGDDKDSLDGGPG
                     DDLLDGGGDGDFMAGGPGNDVYVVDGAGPGPLGDIVDEAAGGGIDLIRSVVDFDLTTT
                     PEVEHLTLLGSAVTGAGNGHGNIVTGNENANIIGGGDGADTLIGLAGGDILTGGAGAD
                     SFVYRSVADSLPQPGPGAPTFDRIIDFTQSQSDHVNLRDVDAIADTAANDAFTFIATA
                     PFDSVAGQLRFAFTPVGTQVEGDVDGNGSADFLIAFDGRVTFAAGDFVL"
BASE COUNT          508 a         1133 c         1174 g          527 t
ORIGIN      
        1 cagcgctcgt cgttgatcgt cacgatctcg gccgagacca ggcaatcgat ctcgcggccg
       61 cccttcggcc ggaacctcgc ctcgaagccg cggacgctgc cgctgccggc gaggtcggcc
      121 tcgaaacggc gccgccgctc cgcgtcgctc cagagccgca ggtcgtcggc cgtgcggcca
      181 acaacctctt ccgtcccgta gcccatgacg ctcaggaacg cgtcgttggc gtcgacgaag
      241 cggtggtcgc gcaaggtgcc gatcgtcgtc ggcaccggag agaggcggaa ggatttggcg
      301 aagcgctcct cgctttgctg caaggccacc tcggccttgt agtggtcctc gaggtcggcg
      361 aaggtgaaga gcatgcacgg ctcggccccg agctccagcg gctgcccggc gacgatgacg
      421 tggcgttccg cgtcgtgcgg cagcgtcagg gcggcttcca tttgcggaat ggtctcgccc
      481 gacctgaggc agcggatggc gaggtcccgg ttctcggcgc gctccagaat atcgacttcg
      541 tagaccgagc ggccgagcac gtcctcgcgc ctgaaacccg tcagcgccag aaaaccttcg
      601 ttgagcttga tgaaacgcag gtccgacagc cggcagatga cggccggcgc ggggttggcg
      661 gcgaacatcc gctcgaagcg ctcctcggct tcgagatgcg ccgagacatc ggtgatcacc
      721 agcacccagc agtcgtgcag gccgtcggcc gtggtcacga cgaggcttcg gatgcggtgg
      781 acccagtccg tgcgcgggcg cgcgcgatgg gccacctcga ccacgacgtc ctcgaggacc
      841 tctccggcga cgacgcgctc gacgggggag ggcgccgcgt cggtggcctg cttcgtccga
      901 tacgtgaact tgaagttctc gcgatagctg tcgaccgatc gcccgagctc gtcgagcgtc
      961 cgcacgccgt gcatcgccag cgcggcttcg ttggcagccg tgatcgcccg gtccggctcg
     1021 atcaggatca cgccttccgt gatgccggcg atgatttgtt gcagctgcga acggtcgggg
     1081 tactcaccca agacatcact cccggcccgg cggaacgacc ctggccccgt ctcgtccgcg
     1141 ccgtccgcgc cgggtgttgc cgctgccggc agcctgggcg acgcgggggc gggatcgaac
     1201 cggggctcac gcctttaaca gctcaggccc gggcggtcga ttccggcagg gattgggggc
     1261 catggcgcct cgaagcaacg gcgctgcaac atcgcacgga cggcagggcg cgatgcgcgc
     1321 agcgggacga tcaatcagat cccgtcagag ggcgcgcaca agcagcgcga tgacgtcgtc
     1381 cttcgcgatc gccttcgcgg gcatgctccc ggtgaccccg cggatgacga acggcgcgcc
     1441 gtcgaggacg atgatggtgt cgatgaggtc agggatgtct gcgggcatgt cgaacggcgc
     1501 cttgacgcca tacatgaacc ggcgcgcatc gagcgccatc cggctgagga tctccggttc
     1561 ccagatcgtc tcgcccctga cctgacgcat gtccatgtga gtgctcgttc gccgggggcc
     1621 ggacatccgg ccgcatcccc gcaactccac gatacgccgc ccggcgccac gcaatgtgcg
     1681 caatcgcacg cggcacgaca gcagcgcgcg ggggttacgt gcgtcagcac cgtcgtcgca
     1741 cgcgattccg cgggaccgct ccccgcacga aatcgggcgc ggaacatgcg acccctgccg
     1801 gtgacgacga cggcgcggac gcgatccgag cagcggtcac gcgaccgccg tcacgtcagg
     1861 cgcgcagcgt caatcgtggt gctgaaggat ggcgcggccg gcgggcagca ggttgtacgc
     1921 ctccttggaa tcggtcaggt cctcgcgcga catgaggccc atcgccacca gcgtccgcag
     1981 ttcgttgagc agcatgcgaa cgtgagtcgg ctgacgctgc cagtcttcat gcgtgacaat
     2041 gagcggacgc ctgccatcgg tggtcagctt cagcgcccgc acctggaaat aattcaagct
     2101 cgactcgcgc atcatcctcc gctcgtcagg gttcggagac gcaccgggag aaggccgcga
     2161 agcctggctt cggcccgacc aacccgggtg atctcggctg agggcgctcg cacagcgcac
     2221 cactgatcct gttaatcgcg aggatgcgca aagggttcag ctgccagaag gtcgcacggc
     2281 agggatgcgg aaacgcgcac gtcaggcagg gccccgccct ccgcgcgtca acaccgttcg
     2341 ggagcacgcg gccgcgctat cgcctcacag cacgaaatcg cccgccgcga acgtgaccct
     2401 gccgtcgaag gcgatcagga aatcggcgct gccgttgccg tcgacgtcgc cttcgacttg
     2461 cgtgccgacg ggcgtgaacg cgaagcgcag ctgcccggcg acgctgtcga agggcgcggt
     2521 ggcgatgaac gtgaaggcgt cgttcgccgc cgtgtcggcg atggcgtcga cgtcgcggag
     2581 gttgacgtgg tcggattggc tttgcgtgaa gtcgatgatg cggtcgaagg tcggcgcgcc
     2641 gggccccggc tgcggcaggc tgtcggcgac gctgcggtag acgaagctgt cggcgccggc
     2701 gccgccggtc aggatgtcgc cgccggcgag gccgatgagg gtgtccgcgc cgtcgccgcc
     2761 gccgatgatg ttggcgttct cgttgcccgt gacgatattg ccgtggccgt ttccggcgcc
     2821 ggtcacggcg ctgccgagaa gcgtcaggtg ctcgacctcg ggcgtcgtcg tgagatcgaa
     2881 gtcgacgacg ctgcggatca ggtcgatgcc gccgcccgcc gcctcgtcga cgatgtcgcc
     2941 aagcgggcct ggcccggcgc cgtcgacgac atagacgtcg ttgccgggcc cgcccgccat
     3001 gaagtcgccg tcgccgccgc cgtcgagcag gtcgtcgccg gggccgccgt cgaggctgtc
     3061 cttgtcgtcg ccgccgagca gcgtgtcgtt gccggcgttg ccgatcagcc tgtcgagccc
     3121 cgagagcccg ctcaggatgt tggcgccgct gttgccggtg aggacgttgt cgaggccgtt
     3181 gcccgtcccg ctcaggctgg ccgcgccggt aagcgtcagg ttctcgaccg cgggcgtcgc
     3241 cagcagattg aagccgaccg agctgcggat gtggtcgacg ccgccgccgg cgacctcgag
     3301 cacggtgtcg ccgacgctgt tgaccaggta ggtgtcgtcg cc
//
LOCUS       DATAIQ010000341         2665 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_387116, whole genome shotgun sequence.
ACCESSION   DATAIQ010000341 DATAIQ010000000
VERSION     DATAIQ010000341.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2665)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2665)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2665
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_387116"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..918
                     /locus_tag="VHN20_05795"
     CDS             <1..918
                     /locus_tag="VHN20_05795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012252632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-linked oxidase C-terminal domain-containing
                     protein"
                     /protein_id="HEX2725314.1"
                     /translation="ATNNLLGVTMVLRDGTVVEIGGEHLDAPGYDLLGLVAGSEGQLG
                     VVTEAVVRILRAAEGARPALLGFDSVEAAGACVAAVIGAGIIPVALEYMDWPAIKICE
                     DFAHAGYPLDVEAMLIVEVEGSDAEIDDMLNRIVAIAGPFHPKTVKVSKSEAESAAIW
                     KGRKSAFGATGRISDYICMDGTIPTGQLPHVLRRIDEIVKAQGLGVANVFHAGDGNLH
                     PLILFDINKPGEMEKAEIAGVEILKLCVEVGGCLTGEHGVGIEKRDLMHHQFSTADLR
                     QQMRVRGVFDPGWLLNPAKVFPLEGRVAA"
     gene            1013..1396
                     /locus_tag="VHN20_05800"
     CDS             1013..1396
                     /locus_tag="VHN20_05800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011665612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease domain-containing protein"
                     /protein_id="HEX2725315.1"
                     /translation="MRGANVRMTARARRLRNDLTDAERKLWYRLNNRQLAGWKFVRQE
                     PIGPYFADFACREARLVVEVDGSQHAESERDKVRDAFLAGRAYRVLRFWNNDVLRNTD
                     SVLETIFAALGGENISPRKRGERGG"
     gene            complement(1393..1920)
                     /locus_tag="VHN20_05805"
     CDS             complement(1393..1920)
                     /locus_tag="VHN20_05805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725316.1"
                     /translation="MKQMLAAACLAFASTAALGAEPLFGFKPDGFHAVFNSSATARKT
                     ERFVGAPQCKPGPPVVCEYRFTSVIRATVSADQADANANEVTVVFARPTHNIKGHTLI
                     SYRIYGDVVHALSPNADAAARGAAVKRLLSALHTANKEVIEVGAVRYALDMKRTGVRF
                     AAKPMPTEAAAPKAY"
     gene            2022..>2665
                     /locus_tag="VHN20_05810"
     CDS             2022..>2665
                     /locus_tag="VHN20_05810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015857645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HEX2725317.1"
                     /translation="MTSFVPATEQDAGAVIAEAAARRTPLALVGSGSKAEIGRPAQSE
                     ATLSSAGLTGITLYEPAELVLAARAGTALSEVVRTLADKGQQLPFEPMDYRRLLAAAG
                     EPTMGGVAAANLSGPRRIMAGAARDSLIGVRLVNGRGEAIKSGGRVMKNVTGLDLVKV
                     MGGSWGTLGLITEVTFKVLPRPEREATLAFHGLDDARAIAALCAAAASPYEVTGA"
BASE COUNT          423 a          888 c          946 g          408 t
ORIGIN      
        1 gccaccaaca acctgctcgg cgtcacgatg gtgctgcgcg acggcacggt cgtcgagatc
       61 ggcggcgagc atctcgacgc gcccggctac gacctcctcg gcctcgtcgc cggctcggag
      121 ggccagctcg gcgtcgtcac cgaagcggtc gtgcgcatcc tgcgcgcggc cgaaggggcg
      181 cgcccggcgc tgctcggctt tgattcggtc gaggccgccg gcgcctgtgt cgccgccgtc
      241 atcggcgccg gcatcattcc ggtggcgctg gaatacatgg actggccggc gatcaagatc
      301 tgcgaggact tcgcccatgc cggctatccg ctcgacgtgg aggcgatgct gatcgtcgag
      361 gtggaaggct cggacgccga gatcgacgac atgctgaacc gcatcgtcgc gatcgccgga
      421 ccgttccatc ccaagaccgt caaggtgtcg aagtcggagg ccgagagcgc cgccatctgg
      481 aagggccgca agtccgcctt cggcgccacc gggcgcatct ccgactacat ctgcatggac
      541 ggcacgatcc cgaccggcca gcttcctcac gtgctcaggc gcatcgacga gatcgtcaag
      601 gcgcaggggc tcggcgtcgc caacgtgttc cacgccggcg acggcaacct gcatccgctg
      661 atcctgttcg acatcaacaa gccgggcgag atggagaagg ccgagatcgc cggcgtcgag
      721 atcctcaagc tttgcgtcga ggtcggcggc tgcctgaccg gcgagcacgg cgtcggcatc
      781 gagaagcgcg acctgatgca ccaccagttc agcaccgccg acctgcgcca gcagatgcgc
      841 gtgcgcggcg tcttcgatcc gggctggctg ctcaaccccg ccaaggtctt tcccctcgaa
      901 gggcgcgtgg cggcgtgact actcctctcc ccgcttgcgg ggagaggtcg agtgcgcggc
      961 agcgcaccgg gtgagggggc ctctccggag caactccgca taggaggcat tcatgcgggg
     1021 cgcaaacgta cgcatgacgg caagggcacg gcggctacgc aacgatctca ccgatgccga
     1081 gcggaagctc tggtatcgcc tcaacaaccg ccaactcgcc ggctggaagt tcgtgcgcca
     1141 ggagccgatc ggcccgtatt tcgccgactt cgcctgccgc gaggctcgtc tcgtcgtcga
     1201 ggttgacgga agccagcatg ctgagagtga gcgggacaag gtccgcgatg ccttccttgc
     1261 cggtcgcgcc taccgcgttt tgcgattctg gaacaatgac gtcctgcgca acacggatag
     1321 cgtgctggag acgatttttg ccgcgcttgg aggtgagaac atctctcccc gcaagcgcgg
     1381 agagagaggg ggctaatatg ccttcggggc cgcggcttcg gtcggcatcg gcttggccgc
     1441 gaagcggacg ccggtgcgct tcatgtccag ggcgtagcgg acggcgccga cctcgatgac
     1501 ctccttgttg gcggtgtgga gcgcgctcag cagcctcttg acggcggcac cgcgcgcggc
     1561 cgcgtcggcg ttgggcgaca gcgcgtgcac gacgtcgccg tagatgcggt acgagatcag
     1621 cgtgtgcccc ttgatattgt gggtcggccg ggcgaagacg accgtgacct cgttggcgtt
     1681 tgcgtcggcc tggtcggcag acaccgtcgc ccggatcacc gacgtgaagc ggtattcgca
     1741 cacgaccggc gggccgggct tgcattgcgg ggcgccgacg aaacgctcgg tcttgcgcgc
     1801 ggtcgccgag ctgttgaaca ccgcatggaa gccgtccggc ttgaaaccga acagcggctc
     1861 ggccccgagc gccgccgtcg acgcgaatgc caggcaggcg gcagccagca tttgcttcat
     1921 gtcaggtctc cggagcgggc gaggcgcgag caaacctggc tcgctgtcgg aacgcggaag
     1981 aggatagtag catagtccgc gaatgaggct agaacgggca catgacgagc ttcgtccccg
     2041 ccacggaaca ggatgccggc gctgtgatcg ccgaggccgc ggcgcgccgc acgccgctgg
     2101 cgctcgtcgg gtccggcagc aaggccgaga tcggccggcc ggcgcagagc gaagcgacgc
     2161 tgtcctccgc cgggctcacc ggaatcacgc tctacgagcc ggccgaactc gtgctcgccg
     2221 cccgtgccgg cacggcgctg tccgaggtcg tgcgcacgct cgccgacaaa ggccagcagt
     2281 tgccgttcga gccgatggac taccgccgtc tcctcgccgc ggccggcgag ccgaccatgg
     2341 gcggcgtcgc ggccgcgaac ctgtcggggc cgcggcgcat catggccggc gcggcgcgcg
     2401 acagcctgat cggggtgcgg ctcgtcaacg gccgcggcga agcgatcaag tcgggcgggc
     2461 gggtcatgaa gaacgtgacg ggcctcgatc tcgtcaaggt gatgggtggc tcgtggggga
     2521 cgctgggcct catcaccgag gtgacgttca aggtgctgcc acgtcccgag cgcgaggcga
     2581 ccctggcgtt ccacgggctc gacgacgcgc gcgccatcgc ggcgctgtgc gcagcggcgg
     2641 cgtcgcccta cgaggtcacg ggcgc
//
LOCUS       DATAIQ010000342         2934 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_331160, whole genome shotgun sequence.
ACCESSION   DATAIQ010000342 DATAIQ010000000
VERSION     DATAIQ010000342.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2934)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2934)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2934
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_331160"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            77..352
                     /locus_tag="VHN20_05815"
                     /pseudo
     CDS             77..352
                     /locus_tag="VHN20_05815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008838664.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Ada metal-binding domain-containing protein"
     gene            729..1055
                     /locus_tag="VHN20_05820"
     CDS             729..1055
                     /locus_tag="VHN20_05820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725318.1"
                     /translation="MLADTASSLRSLGDQTKENMRAVWEGAKKLPRPAQVIPASGRCD
                     VSAGGQLNCREAAVRACKAKGYASGRAVDTASVEACRPARPHERQSGEMVTCQTRYEV
                     TTALCW"
     gene            complement(1085..1462)
                     /locus_tag="VHN20_05825"
     CDS             complement(1085..1462)
                     /locus_tag="VHN20_05825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725319.1"
                     /translation="MVLRDLKWSGAEKKIARRAFEAARDSALAGIVTEFKTKAAAVTT
                     PSEMWELEDYLRERRREIEGAFDYRYSQLPRVFAQLICQGALDEAQLAGLSPDKLAII
                     HDIRSRLTGLDRPEGSAEILSDC"
     gene            complement(1496..1770)
                     /locus_tag="VHN20_05830"
                     /pseudo
     CDS             complement(1496..1770)
                     /locus_tag="VHN20_05830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005766286.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GMP synthase (glutamine-hydrolyzing)"
     gene            2287..2475
                     /locus_tag="VHN20_05835"
     CDS             2287..2475
                     /locus_tag="VHN20_05835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725320.1"
                     /translation="MKQAEEYRQQAKECRELAKHALTRSERDQLLELAEIWERLASER
                     MSSLPYQPDPAPAKPEKK"
     gene            complement(2621..>2934)
                     /locus_tag="VHN20_05840"
     CDS             complement(2621..>2934)
                     /locus_tag="VHN20_05840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725321.1"
                     /translation="VADHLHVNVREPATETWRFARFAPAWARRLGRNLTGESVLHPAY
                     APYNTLLKDMLAQAVEREMPFYAATHVGGVSGTEVAHRVLIPMSATGQGVTHCMVFTV
                     V"
BASE COUNT          560 a          955 c          903 g          516 t
ORIGIN      
        1 agagcaggaa tcggaatgcg cccgtcccga tgagccctta cgtttggcga caagagcatc
       61 gactggaata gcgaagatgg aacccgccaa gcgtgagcgc ctcccgacaa gccctcagtc
      121 cgtcgccagc accgaagccg atccgcgctg gcaatcgatc gtcaatcggg acacgagttg
      181 cgacggcaag ttcgtctacg cggtgaagac gaccggcgtc tattgccgcc cgtcctgccc
      241 atcgcgcctc gcaaagcctc gaaacgtcga ttttttcgcg acccccgccg aagccgaagc
      301 ggccggtttc cgtgcctgcc gccgttgccg gcccggcgac acgccgcttg cagcgcctgc
      361 gacgcccacc accgccgcgg cggtcgacgc gaccgtagcg gcatagggtt cgccgtggtt
      421 tgcgcagcgg tctcccgcgg ctaaagcggg atcgattcag atcgaatcga tcccgctccg
      481 cttctcctaa gtggcatgat ccggatcaag tccgggacaa gcccttttcg gcgaagtggt
      541 gcccacttcg ccggatcatg ctttagagtt cgggccacga atcagttccg catcggccgc
      601 aggcgcgcgc gatgtcagcg tgtaacccga tacggagaga cccgttgcac cttcggcgat
      661 acgcggcgac tgtcctggcg ctcgccagcc ttctcatcgg cggctgttat aaagctcctg
      721 aaaacgggat gctggcggac acggcctcgt cgctgcgctc gctcggcgac cagacgaagg
      781 agaacatgcg cgccgtctgg gaaggcgcca agaagctgcc gcgtccggcc caggtcatcc
      841 ccgccagcgg acgctgcgac gtctcggccg gcggccagct aaactgccgc gaagccgccg
      901 ttcgggcctg caaggcaaaa ggctacgcga gcggccgcgc cgtcgacacc gccagcgtcg
      961 aggcctgccg cccggccagg ccgcatgagc gacagagcgg cgagatggtc acgtgtcaga
     1021 ccagatacga ggtcacgacc gcgctgtgct ggtgaggaac tacatggccc acctgcgcaa
     1081 gtcctcagca atcgctgagt atttccgccg agccttcagg gcgatcaagt cctgtcaggc
     1141 gagatcggat gtcgtgtatt atcgccagct tgtcgggcga taatcctgcg agctgcgctt
     1201 catccaaagc gccctggcaa atgagctgcg caaacacacg aggaagctgc gagtagcggt
     1261 aatcgaacgc cccctcgatc tcccggcgcc gctcgcgcaa atagtcttcg agttcccaca
     1321 tctcggaagg cgtcgtcacg gcggccgcct ttgtcttgaa ttcggtcacg atccctgcca
     1381 acgccgagtc gcgcgcagcc tcgaaggcgc ggcgtgcgat cttcttttcg gcgccggacc
     1441 acttcagatc gcgcaggacc atgcggcgcc tcctcaggcg aatttgcggg ttcccctact
     1501 cccactcgat cgtccccggc ggcttgctcg tgatgtcata cgtgacgcgg ttgatccccg
     1561 cacctcgttg acgatgcggt tggcgacgcg gccgaggaag gccatgtcga aaggatagag
     1621 gtcggcggtc atgccgtcga tagaggtgac ggcgcgcagc gcgcagacat agtcgtaggt
     1681 gcgcgcgtcg cccatgacgc cgacggtgcg caccggcagc agcacggcga aggcctgcca
     1741 gatgtcgtcg tagaggccgg cgcggcggac gaaaatgacg cttaaggcgg ctgaagcggg
     1801 cccctcccaa cgtccggagt tggccgaaag cggaatgacc gctttcgatg ctgagacgct
     1861 cgacagttgc cgtttcttag gttcgattaa gcccaacttg tttggtcgct ctcgccagtt
     1921 cggatcggcg ggctttggcg agcacgctca gcgccgcgac gggcgtccca aggtctaacc
     1981 gagctgacag agaacgacac aaggccctgc aaaagcccgg gcttttcgtt ttcaagcccg
     2041 accacaaccc ctatccgtta gacaaaggaa aggccccgcc agtccttctc ttctgacggg
     2101 gcggccgttc ttgagtagca gtcgcaaagg ccctccaggg ggagatcggg gcctcgctga
     2161 atcagtgcgc ggaatggcgc taggttccgg ccacaacccc tatccgttaa ggtaacgccc
     2221 gcttaacgct tgatattgcc aagccgtgcc ggcctaccta gatcctgccg aaaaagaggc
     2281 agtcaattga aacaggcaga agaataccgc cagcaagcga aggagtgccg cgaactggcg
     2341 aaacatgcac tgacgcgcag cgaacgtgac cagctcttgg aactggccga gatttgggag
     2401 cgcctcgcca gcgagcgcat gtcatcgctt ccgtatcagc ccgatccggc gccggccaaa
     2461 cctgagaaga agtagcggat cgcctcgtct attcggtagg ggaagtcggc ttctctcgct
     2521 ttttgctctc ggagcctcgc cagtatgggg gcctgacctt ggctggccag cgctcgcaga
     2581 gattatcacg tcccctgggc agactcgaaa tgccgtttgc ctacaccacc gtgaacacca
     2641 tgcaatgtgt taccccctgg ccagtggcgc tcatcggaat cagcacgcgg tgcgccacct
     2701 ctgtcccgct tacgccgccg acgtgtgtgg ctgcgtagaa aggcatctca cgttcgaccg
     2761 cctgcgcgag catgtccttc agcagagtgt tgtatggcgc ataggccggg tgaaggacac
     2821 tctcgcccgt caggttccgc ccgagccgcc gagcccacgc gggcgcaaaa cgcgcgaagc
     2881 gccacgtttc ggtggcaggt tccctcacgt tgacatgcag atgatcggct actg
//
LOCUS       DATAIQ010000343         1610 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_433491, whole genome shotgun sequence.
ACCESSION   DATAIQ010000343 DATAIQ010000000
VERSION     DATAIQ010000343.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1610)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1610)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1610
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_433491"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1610)
                     /locus_tag="VHN20_05845"
     CDS             complement(<1..>1610)
                     /locus_tag="VHN20_05845"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEX2725322.1"
                     /translation="DRQVIDLKAPVISDVFTGAVANAPVFAITVPVMHDGEVTHLLSL
                     SISTERLVGMLRLGLKPEWTAGIVDRNGVVVARSELHRETSGRRGPEAFVTQASRSEG
                     LWRGTGGGGGPVLVGYARSTLTGWRVGASVPEAVIEAPLMRALWLLTAVGALLVGTSL
                     LLAYAVATRIAGSVGNLAACAARLGNGETVLPMRGALREANEVMQGLSAASIGLRERA
                     RERDAAEAAMRASEAQFRQLAEALPQLVWIMGADGRAIYVNKRFAEYFGHSGGLDLGT
                     AAAIHPEDLAQAQKVQEVAISAGQPYDTIVRLRRHDGVCRWHLLAVVPLQRGGDVAAW
                     VGAATDIDDLRRAEDANARLAAIVTASGDAVMSFSAKGTIQSWNPAAEELFGYTAEEA
                     LGAPAELLVPPDSPKGPRGAFERALAGETVKTDTVRVAKSGERIDVAITAAPMRTPGG
                     AIVGVSTVLRDIRRRKRREAALRESERRLQALLDNATVAIFLMDERQQCIYMNTAAEK
                     LTGYALDEALGRPLHEVVHRTGADGNAH"
BASE COUNT          224 a          571 c          583 g          232 t
ORIGIN      
        1 atgcgcgttg ccgtcagcgc ccgtgcgatg cacgacctcg tgcagcgggc ggcccagggc
       61 ctcgtcgagc gcgtagcccg tgagcttctc ggcggccgtg ttcatgtaga tgcattgctg
      121 gcgctcatcc atcaggaaga tcgccaccgt ggcgttgtcg agaagcgcct ggagccggcg
      181 ctcgctctcg cgcagggcgg cttcgcgccg cttgcgccgg cggatgtcgc gcagcaccgt
      241 cgagaccccg acgatggcgc cgccgggcgt gcgcatcggc gcggccgtga tggcgacgtc
      301 gatgcgctcg ccgcttttcg cgacccgcac cgtgtcggtc ttgacggtct cgccggcgag
      361 cgcccgctcg aacgccccgc gcggcccttt cggactgtcg ggcgggacga gcagctcggc
      421 cggggcgccg agcgcctcct cggcggtgta gccgaacagc tcctcggcgg ccggattcca
      481 ggactggatg gtgcccttcg ccgagaagct catgacggcg tcgccggatg ccgtgacgat
      541 ggcggcgagg cgcgcgttgg cgtcctcggc gcgccgcagg tcgtcgatgt cggtggcggc
      601 gccgacccag gcggcgacgt cgccgccgcg ctgcagcggc acgaccgcca gcagatgcca
      661 tcggcagacg ccgtcgtgac ggcgcagccg cacgatcgtg tcgtagggct ggccggcgct
      721 gatcgcgact tcctggacct tctgggcctg ggcgaggtcc tcgggatgga tcgcggcggc
      781 cgtgcccagg tcgaggccgc cggaatgacc gaaatattcc gcgaagcgct tgttgacata
      841 gatggcgcgg ccgtcggcgc ccatgatcca gaccagctgc ggcagggcct cggccagctg
      901 ccggaactgg gcttcgctgg cgcgcatcgc cgcctcggcg gcatcgcgct cgcgtgcgcg
      961 ctcgcgaagg ccgatcgacg ccgccgagag gccttgcatg acctcgttgg cctcgcgcag
     1021 agccccgcgc atcggcaaca ccgtctcgcc attgccgagc ctggcggcgc aggcggcgag
     1081 attgccgacc gatccggcga tgcgggtggc gacggcgtag gccaggagca gggacgtgcc
     1141 gaccagcaag gcgccgacgg cggtcaggag ccacagcgcc cgcatcagcg gggcctcgat
     1201 caccgcctcg ggcacgctcg ccccgacccg ccatccggtg agcgtcgagc gcgcatagcc
     1261 gacgagaacc ggaccaccgc cgccgcccgt tccgcgccag aggccttccg acctcgatgc
     1321 ctgcgtgacg aacgcttccg ggccgcgccg cccgctcgtc tcacggtgaa gctccgagcg
     1381 cgccacgacg acgccgttcc ggtcgacgat gccggccgtc cattcgggct tcaggcccag
     1441 gcgcagcatt ccgacgagcc gctcggtcga gatgctgaga ctgagaagat gcgtgacctc
     1501 gccgtcgtgc atgaccggaa cggtgatggc gaagaccggc gcattggcga cggcgccggt
     1561 gaagacgtcc gaaatgaccg gtgctttcag gtcgatgacc tggcgatcga
//
LOCUS       DATAIQ010000344         2530 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_239152, whole genome shotgun sequence.
ACCESSION   DATAIQ010000344 DATAIQ010000000
VERSION     DATAIQ010000344.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2530)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2530)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2530
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_239152"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..366
                     /locus_tag="VHN20_05850"
     CDS             <1..366
                     /locus_tag="VHN20_05850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018261697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEX2725323.1"
                     /translation="DGIIRLWNPGAERIFGHSATEALGQSLDLIIPERLRPRHWDGYH
                     QVMATGESRYGHGDLLSVPSLRKDGRRISVEFTIVPLKDEGGRMTGMAAVMRDVTQRF
                     EEIKALRQPLRDGTGPGRA"
     gene            545..1672
                     /locus_tag="VHN20_05855"
     CDS             545..1672
                     /locus_tag="VHN20_05855"
                     /inference="COORDINATES: protein motif:HMM:NF017773.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX2725324.1"
                     /translation="MPSPQIRVRFATNRNPVRGRSLFGNQFRDDGPAHYVTGSVDVAR
                     LSNLPDTGWSPDTQSLEIDKPVERLADVATAPAGGAGAGATPARGILKFAEERMASEE
                     RDVFAAGGAQFGLVLLPGFASTFLDSMRRAAQVAHAYGTDNVFCFSWPANGVVDLDNY
                     RLDRDDAKASAPAMANALAQLFALLQRVEEGRRPKLHLVAHSMGVFALRHAVQQIRAE
                     QPQLIEQRVFHTALLMAGDEDDDALADENRLRPLLKLAHRVAIYCCGSDIPLGISQGL
                     GAIGARLGHRGPRAWDHLPDEGVELVDCSDVATTHDDFGRTHFGHQYYRLSPRVVSDV
                     VQVLAGRAPRQIGGRMPDPRGSQDGRAFLLPFNAEAGVPIA"
     gene            1855..2094
                     /locus_tag="VHN20_05860"
     CDS             1855..2094
                     /locus_tag="VHN20_05860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018319202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725325.1"
                     /translation="MRMGLVWIGALLVVAGVLFTAAQAIWRGRLSGPQRAPSGLARDT
                     LEPPNPAGGFSLRANLPGLAMIAFGALLLLVGAVS"
BASE COUNT          377 a          879 c          837 g          437 t
ORIGIN      
        1 gacggcatca tccggctctg gaatcccggc gccgagcgca tcttcggcca ttctgccaca
       61 gaggcgctcg gccaatccct cgacctgatc attcccgagc ggctgcggcc gcgccactgg
      121 gacggctacc atcaggtgat ggcgacgggc gagagccgct acggccacgg cgatcttctg
      181 tccgtgccga gcctgcgcaa ggacggccgc cgcatctcgg tggagttcac catcgtgccg
      241 ctgaaggacg agggcggccg catgaccggc atggcggcgg tgatgcgcga cgtcacccaa
      301 cgcttcgagg agatcaaggc cttgcggcag ccgcttcggg acggaaccgg gccgggccgc
      361 gcctgacgtc gcggttcacg tgatcaggat caagcgcatc taccatccga caggctcctg
      421 tttggccggc ctgtcgccga catctgctgg ctgcagccgg attctctgct acggtctggg
      481 ttgcgaggag ttgcgcttcg gcggaacgct ggcgcgaagc gcatcagcat ttggagggct
      541 tctcatgccg tcacctcaga tccgcgttcg cttcgcgacc aaccgcaacc ccgtccgcgg
      601 acgttcgctc ttcggcaacc agttcaggga cgacggcccg gcgcactacg tcaccgggtc
      661 ggtcgacgtg gcgcggctct cgaatcttcc cgatacgggc tggtctcccg acacccagag
      721 cctcgagatc gacaaaccag tcgaacggct cgccgacgtc gcaaccgcgc cggccggagg
      781 cgcaggcgcc ggcgcgactc cggcgcgcgg catcctcaaa tttgccgagg agcggatggc
      841 gtccgaggag cgcgacgtat tcgctgcggg tggcgcgcaa ttcgggctcg tgctgctgcc
      901 tggcttcgcc tcgacattcc tcgattcgat gcggcgtgca gcccaggtcg cgcatgccta
      961 tggcaccgac aacgtgttct gcttctcctg gccggcgaac ggcgttgtcg acctcgacaa
     1021 ctaccggctc gaccgcgatg acgcgaaggc gtcggccccg gccatggcca acgcgctcgc
     1081 ccagcttttt gcattgctgc agcgggtcga ggaggggcgc cggcccaagc ttcacctcgt
     1141 cgcgcattcc atgggcgtct tcgccttgcg ccacgccgtg cagcagatcc gggccgagca
     1201 gccgcaactg atcgagcagc gcgtcttcca caccgccttg ctgatggcag gcgacgagga
     1261 cgacgacgcg ctcgccgacg agaaccggct ccgccccttg ctcaagctcg cccaccgggt
     1321 cgcgatctac tgctgcggca gcgacatccc gctcggcatc agccaggggc tcggggccat
     1381 cggcgcgcgc ctcggccacc gcgggccgcg cgcgtgggat cacctgcccg atgaaggcgt
     1441 cgagctggtc gactgctccg acgtcgccac gacgcacgac gatttcgggc gcacgcattt
     1501 cggccatcaa tattatcgcc tgtcgccgcg cgtcgtcagc gacgtcgtgc aggttcttgc
     1561 cggacgcgct ccgcgccaga tcggcgggcg catgcccgac ccgcgcggct cgcaggatgg
     1621 ccgtgccttc ctgctgccgt tcaacgccga ggcgggcgtg ccgatcgcgt gagcccacgt
     1681 tcacgaccgc gggaatgggc gcggccatga tcgatggatc cgcttcgcac cggagcaggt
     1741 tgacggtcat cgagatcgcg ccgcacgcgg gcattcacag ccgcacgcct tgacgctaac
     1801 ctcgccctat cgccggcgcg tgcacgtcgc cgcgtcggcc gggagggacg cgtcatgcgc
     1861 atggggctgg tctggatcgg tgcgcttctg gtcgtcgccg gagtgctgtt cacggcggcg
     1921 caggcgatct ggcgggggcg gctcagcggc ccgcagcgcg ccccttcggg cctggccagg
     1981 gacaccctcg agccgcccaa ccccgccggc ggcttcagcc tcagggccaa cttgcccggg
     2041 ctcgccatga tcgcgttcgg cgccctgctt ctgctcgtcg gcgccgtttc ctgagcgaag
     2101 cctgccccgg agcccgatcc ggagtgtgcc cggctcgttc ggggcattga cgcttgttgc
     2161 gggcctcgcc cgcatttgtg cggcgcaaac gtattcggcg cgcgggcgcc gcgatcccaa
     2221 aagcaatcgg gggcgacgtt aaacttgtcc caatgaaggg ggcgacaagc tttacttgtc
     2281 tgggtatagt tcacgcgggt gcaggtcgcg ttcgcgtgac tgtccgacac tatggcgtca
     2341 cgaattcgcg gctgcctcga gccctggctc aggaggtatt ggtatggcga atttccacgt
     2401 gattgctggc ccggacgaaa cgctggccca tccgacggtt cgcaaaattg gcaccgccga
     2461 catcagatat gccctgcgca agggatttga tgatttcatg gcgatgccga cccacctcat
     2521 cttcctcggg
//
LOCUS       DATAIQ010000345         1878 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_192797, whole genome shotgun sequence.
ACCESSION   DATAIQ010000345 DATAIQ010000000
VERSION     DATAIQ010000345.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1878)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1878)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1878
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_192797"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(437..1024)
                     /locus_tag="VHN20_05865"
     CDS             complement(437..1024)
                     /locus_tag="VHN20_05865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725326.1"
                     /translation="MATPVDYIRSKAHDFRALTSKITAMQHRAALARIAARNAGNTVM
                     VQDMADTITRLGTLRNLHAAAVAKLDDLNVVLAKLGAPDNYLGVLPAILPVAVVATAT
                     AIVAMMVAVYHKSSVESERLALAEKVLGDGRGVPTPQQIEALKALRDVANSGGSNPSG
                     DGVSGVVSSLLRPLAIGVAVVVVGPKVLDMIGRRR"
     gene            complement(1025..1288)
                     /locus_tag="VHN20_05870"
     CDS             complement(1025..1288)
                     /locus_tag="VHN20_05870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725327.1"
                     /translation="MIRADWLTWVTLALFAIWLLAVLRLGVAAEIHHAWLGLPAVSPE
                     VWWPLRIVCALVLLDDAMQHVRQLRDRSYRSPLHRLAARLRII"
     gene            complement(1285..1482)
                     /locus_tag="VHN20_05875"
     CDS             complement(1285..1482)
                     /locus_tag="VHN20_05875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725328.1"
                     /translation="MLGIGLLIVGIILFGVGSQAKRERIEEERIGLPSAKGLSGVPFY
                     VLGVIAIIVGILMLAGIIRLA"
     gene            complement(1488..>1878)
                     /locus_tag="VHN20_05880"
     CDS             complement(1488..>1878)
                     /locus_tag="VHN20_05880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725329.1"
                     /translation="TLQAKVAATQAALPNATVAAPVPTASVVADGGNGVTVPRKALWS
                     RMAASRTAAAPAPAPYVAPYAAPYTAPQGLPPTASVVAPETAPEMAADTTAAKKPSSK
                     NSLVMLAAGALALLVVTRKGGTFTSWR"
BASE COUNT          318 a          683 c          570 g          307 t
ORIGIN      
        1 ccggtcgcac ccgccgcatc gaatccgctc ttgctgcgga tgatccgcac cgccgccttc
       61 gcgcccacgc cgatggccgc gtccttcacg cccgccgtca gcatcggcac gacgttgcgg
      121 atggagatgg ctccaccacg ccgcccacca ctgcgacgac gccgcacgac cgtgaccgac
      181 cgccgccgac gacggcgcgg tgccgtcgcc actgccgaac gccttctccc cgaactgcgc
      241 cgccgtctcc gtgccatcgt cgtggtgctc cgtgttgaag ttgaccgccg ccgacgccga
      301 cgcggcgccg ctgcgacatt gcgacgacgc acgctgcgcc gccgacgtac ctgcgaacga
      361 ttgcggcgac gtgcgccacc cgtccgcgcc ctacgtgtcc gtgccatgcg atgaaccccc
      421 tagcgaatgg tgagcgttac cgccgccgcc cgatcatgtc gagcactttc ggcccgacga
      481 ccacgaccgc cacgccgata gccagcggtc gcagtagtga cgacacgacg ccgctaaccc
      541 cgtcgcctga cgggttgctg ccgccgctgt tcgccacgtc cctcagtgcc ttcagcgcct
      601 ctatctgctg cggtgtcggc actccccgtc cgtcgcctaa cactttctcc gcgagcgcca
      661 gccgctcgct ttccaccgac gacttgtggt agacagccac catcatggcg acgatggccg
      721 ttgcggttgc cacgacggcg accggcagaa ttgcaggcaa cacgccgaga tagttgtccg
      781 gtgcgccgag cttcgcgagc acgacgttca ggtcgtccag cttcgcgacc gccgctgcat
      841 gcaggttgcg cagcgtgcct aaccgcgtga tcgtgtcggc catgtcctgc accatgaccg
      901 tgttgcccgc attccgtgcc gcgatgcgcg cgagcgcagc gcgatgctgc atggccgtga
      961 tcttcgacgt gagcgcgcgg aagtcatgcg ccttgctgcg aatgtagtca actggcgttg
     1021 ccattcagat gatcctcagt cgcgctgcga gacgatgcaa cggtgaacga tacgaacgat
     1081 cacgaagctg cctgacgtgc tgcatcgcgt cgtcgagcaa gacgagcgcg catacgatac
     1141 gcaacggcca ccacacttcc ggcgacacgg cgggcaagcc gagccatgcg tgatgaattt
     1201 cggcggcgac gcctaaccgc aggacggcca gtagccatat cgcgaagagg gcgagcgtca
     1261 cccatgtcag ccagtccgcg cgaatcatgc gagccggata atcccggcca gcatgaggat
     1321 gccgacgata atcgcgatga cgccgagcac gtagaacggc acgcccgaca gccccttcgc
     1381 ggacggcagg ccgatgcgct cttcttcgat gcgctcacgc ttcgcctgcg acccgacgcc
     1441 gaagagaatg atgccgacaa tgagcagccc aattccaagc atgtgcgcta tctccatgaa
     1501 gtgaaagtgc cgcccttgcg cgtcaccacg agcagcgcga gcgcgcctgc cgcgagcatg
     1561 acgagcgagt tcttcgatga cggcttcttc gctgccgtcg tatctgccgc catctccggt
     1621 gccgtctctg gcgcgacgac cgatgccgtc ggcggcagtc cctgcggtgc ggtatacggc
     1681 gccgcgtaag gcgcaacgta tggtgcaggc gcaggcgccg ccgccgtgcg cgatgccgcc
     1741 atccgtgacc agagagcctt acgcggaacc gttaccccgt taccaccgtc cgcgacaacc
     1801 gatgccgtcg gcacgggcgc tgccaccgtt gcgttaggca gcgccgcttg cgtggccgcg
     1861 accttcgcct gcaacgtc
//
LOCUS       DATAIQ010000346         1539 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_331268, whole genome shotgun sequence.
ACCESSION   DATAIQ010000346 DATAIQ010000000
VERSION     DATAIQ010000346.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1539)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1539)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1539
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_331268"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            271..1128
                     /locus_tag="VHN20_05885"
     CDS             271..1128
                     /locus_tag="VHN20_05885"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013216818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HEX2725330.1"
                     /translation="MLSFQDLVLTLHRYWGDRGCVILQPYDLEMGAGTFHPATVLRAL
                     GPEPWNCAYVQPCRRPTDGRYGENPNRLGHYYQYQVILKPSPSDLQALYLGSLDAIGI
                     DPLKHDIRFVEDDWESPTLGAWGLGWEVWCDGMEVTQFTYFQQVGGFDCKPVAGELTY
                     GLERLAMYIQGKDNVFDLDFNGAGVTYGDVFRDNERQMSKWNFKVADTEALFDLFRKA
                     AAECENSLAAGIPIAAYEQAIKASHVFNTLQARGVISVAERQAYIGRVRDLAKGACQA
                     WMTHKGYEA"
     gene            1125..>1539
                     /locus_tag="VHN20_05890"
     CDS             1125..>1539
                     /locus_tag="VHN20_05890"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: protein motif:HMM:NF014183.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HEX2725331.1"
                     /translation="MSSDFLLELLSEEIPARMQARARGDLARLFAENLGDAGLGHGAI
                     TTYSTPRRLVLIARDVAAETEAASEELKGPRTSAPPQALEGFLRKTGLAKGQLEERDG
                     VWFARIERPGRSASDVLAGAVAGIVCDFPWPKSMRW"
BASE COUNT          265 a          503 c          524 g          247 t
ORIGIN      
        1 ccgtcgagcg cgtgaacagt tccgaacaag tagatcgtcg tatcggggtc cttgacaacc
       61 cacatcgctg gatcgaggtc ggggcgcgcc tgctgggcgg cggcgggcac ggccagcgcc
      121 agtgcaaggc aggcgccaac aaacccggtt cgaatatgca ttcgtctctc tccatcgcgg
      181 cgattcgctg aggcaaacct agcggggcct ttcctgccgg gaaatgaatg ttgcccgccg
      241 cgcggcgatg ggccaaagcc cgcggccacg atgctgagct tccaagacct cgtcctcacc
      301 cttcaccgct attggggcga caggggctgc gtcatcctcc agccctacga tctcgaaatg
      361 ggggcgggga cattccaccc ggcgacggtg ctccgtgcgc tcgggcccga gccatggaac
      421 tgcgcctatg tccagccgtg ccgccggccg acggacgggc gctatggcga gaaccccaac
      481 cggctcggcc attattacca gtaccaggtg atcctgaagc cgagcccgag cgatcttcag
      541 gcgctttacc tcggaagcct cgacgcgatc ggcatcgacc ccttgaagca cgacatccgc
      601 ttcgtcgagg atgactggga atcgccgacg ctcggcgcct gggggctggg ctgggaagta
      661 tggtgcgacg gcatggaggt gacccagttc acctatttcc agcaggtcgg cgggttcgac
      721 tgcaagccgg tcgccggcga actgacctac gggctcgaac gtctcgccat gtacatccag
      781 ggcaaggaca atgtcttcga cctcgatttc aacggggcgg gcgtgaccta tggcgacgtg
      841 ttccgcgaca atgagcggca gatgtcgaag tggaatttca aggtcgccga caccgaggcg
      901 ctgttcgacc tgttcaggaa ggcggcggcc gagtgcgaga acagcctcgc cgcgggcatc
      961 ccgatcgccg cctacgagca ggcgatcaag gccagccacg tgttcaacac gcttcaggcg
     1021 cgcggggtta tctcggttgc cgagcgccag gcctacatcg gccgggtccg cgacctcgcc
     1081 aagggcgcct gccaggcgtg gatgacccac aaggggtatg aggcgtgagc tcggacttcc
     1141 tgctcgagct gctgtccgag gagatcccgg cgcggatgca ggcgcgggcg cggggcgacc
     1201 ttgcgcggct gttcgcggaa aacctcggcg acgccgggct cggccatggc gcgatcacca
     1261 cttattccac gccgcgccgc ctcgtgctca tcgcccgcga cgttgccgcc gagaccgaag
     1321 ccgcaagcga ggagctcaag ggtccaagga cttcggcgcc gccgcaggca ctcgaaggct
     1381 ttctccggaa gaccgggctc gcgaaaggcc agctcgagga gcgcgatggc gtgtggttcg
     1441 cgcggatcga gcgccccggc cgctcggcga gcgacgtgct ggccggggcg gtggcgggca
     1501 tcgtctgcga cttcccctgg cccaagtcga tgcgctggg
//
LOCUS       DATAIQ010000347         1744 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_239204, whole genome shotgun sequence.
ACCESSION   DATAIQ010000347 DATAIQ010000000
VERSION     DATAIQ010000347.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1744)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1744)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1744
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_239204"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            49..>1744
                     /locus_tag="VHN20_05895"
     CDS             49..>1744
                     /locus_tag="VHN20_05895"
                     /inference="COORDINATES: protein motif:HMM:NF017745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF885 domain-containing protein"
                     /protein_id="HEX2725332.1"
                     /translation="MNRRLTLALLAATALSACATTTTTAPLAAPTVLAEPVAATMSQQ
                     DAHDALFALFKKSDEDNLRRNPLSALARGDLRYADQLGNYLTPEYNAAEIAAARDELA
                     ALRAIPRAVLSPTDRIAYDVFEYSNEQGLKGYAPEILALTEVRPVNHFSGFHTFYPTF
                     ASGKSAAPFKTVLDYENNLKRHRQYAALTDRSIAKFREGLASGVVETKLTVRNVIEQL
                     DTQLKQPVEQSPFYGPIGMFPETVSAADRARLTAEYKDVIGNVVYPAHKRLRDFLANE
                     YLPHARDQVGLSSMKGGAKLYQFMIEQTTTLPLTADYLHNLGLSEVARIRGEMEKVRA
                     EVGFKGTLQQFFDDLRTNPKLKPKSREWLTEQYYRIGKAVDAKVPEFFALVPKTKLEI
                     RPYEPFREKFEAGGSYQQGTPDGSRPGIFYFNAYDLPSRTTPGMTTLYLHEGAPGHHF
                     QISLAQENEALPAFMRFGGNTAFVEGWALYAETLGYDMGFYKDPIQRMGTLDDEMLRA
                     MRLVVDTGLHSKGWSREQAIEYMLSNSGMGRTDATAEVERYIAIPSQALAYKVGALT"
BASE COUNT          338 a          576 c          556 g          274 t
ORIGIN      
        1 gcgccccgac tgttataggc ggctaaaaca cttcgctggg gatggaaaat gaaccgccgc
       61 cttacgcttg cactgctcgc cgcgactgcc ttgagcgcct gcgccacgac caccacgacc
      121 gctccgcttg cggcgcccac cgtcctggcg gagccggtgg ctgcgacgat gagccagcag
      181 gacgcgcatg acgcgctgtt cgccttgttc aagaagagcg acgaggacaa tctcaggcgc
      241 aatccgctga gtgccctggc gcgcggcgac ctgcgctacg ccgaccagct cggcaactac
      301 ctgacgccgg agtataatgc ggccgagatc gcggcggctc gggacgagct ggcggctctg
      361 cgcgcgatcc cgcgggcagt gctctcgccg accgacagga tcgcttatga cgtgttcgaa
      421 tattcgaacg agcaggggct gaagggctat gcgcccgaga tcctcgcgct gaccgaggtt
      481 cggccagtca accatttctc cggcttccac accttttacc cgacgttcgc cagcggcaag
      541 agcgccgctc cgttcaagac cgtgctggac tatgagaaca atctgaagcg gcaccgccaa
      601 tatgccgcgc tgaccgaccg ctcgatcgcc aagttccgcg aggggctggc gagcggggtg
      661 gtcgagacca agctcacggt tcggaacgtc atcgagcagc tcgacacgca gttgaagcag
      721 ccggtcgagc aatcgccgtt ctacgggccg atcggcatgt tcccggagac ggtgagcgcc
      781 gccgaccggg cgcggcttac ggccgagtac aaggacgtca tcggcaacgt cgtctacccg
      841 gcgcacaagc gcctccgcga cttcctggcg aacgaatatc tccctcacgc tcgcgaccag
      901 gtcgggcttt cctcgatgaa gggcggcgcg aagctctatc aattcatgat cgagcagacg
      961 acgacgctgc cgctcaccgc cgactatctg cacaatctgg gcctgagcga ggtcgcgcga
     1021 atccgcggcg agatggagaa ggtgagggcg gaggtcggct tcaagggcac cctccagcag
     1081 ttcttcgatg acctgcgcac gaaccccaag ctgaagccga agagccgcga atggctgacc
     1141 gagcaatatt accggatcgg caaggcggtc gacgccaagg tgccggaatt tttcgcgctg
     1201 gtgcccaaga ccaagctcga gatccgcccg tacgagccgt tccgcgagaa gttcgaggcg
     1261 ggcgggtcgt accagcaggg cacgcccgac ggatcgcggc ccggcatctt ctatttcaac
     1321 gcctacgacc tgccgagccg gaccacgccc ggcatgacca cgctctacct ccacgaaggc
     1381 gcgccgggcc accatttcca gatcagcctg gcccaggaga acgaggcgct gccggcgttc
     1441 atgcgcttcg gcggcaatac cgccttcgtc gaaggctggg cgctctatgc agagacgctg
     1501 ggctacgaca tgggcttcta caaggacccg atccagcgga tggggacgct cgacgacgag
     1561 atgctgcggg cgatgcggct cgtcgtcgat accggcctcc attcgaaggg ctggagccgc
     1621 gagcaggcga tcgaatatat gctgtcgaac tccggcatgg gccggaccga cgcaaccgcc
     1681 gaggtcgagc ggtacatcgc cattcccagc caggcgctgg cctacaaggt cggagcgctg
     1741 acca
//
LOCUS       DATAIQ010000348         2290 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_295803, whole genome shotgun sequence.
ACCESSION   DATAIQ010000348 DATAIQ010000000
VERSION     DATAIQ010000348.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2290)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2290)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2290
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_295803"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..184
                     /locus_tag="VHN20_05900"
     CDS             <1..184
                     /locus_tag="VHN20_05900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725333.1"
                     /translation="FKDRRKPRNDEAARLGFRSPLFLAKLGFDLRDRYDDLLSEPLPD
                     ELRRSLDRLNERHATS"
     gene            complement(210..1286)
                     /locus_tag="VHN20_05905"
     CDS             complement(210..1286)
                     /locus_tag="VHN20_05905"
                     /inference="COORDINATES: protein motif:HMM:NF014653.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ldh family oxidoreductase"
                     /protein_id="HEX2725334.1"
                     /translation="MPEFVYAQAEKVHAFAVALLTRHDVPEEDARIVADCLVRADLRA
                     VDTHGVARLPKYLERLGLGLINRRPDLKPVEVTPVAAALDGQNGFGFLVATRAMDKAI
                     DMARRFGIGIVSARRSTHFGMAASYVLQAVEQGFVALVFTNASPAMPPWGGREALLGT
                     SPFAAGAPGEAGDRFVLDMAPSLVARGKIRRALTRGERIPDDWALDGAGQRTTDPARA
                     LEGVMLPMGGPKGSGLSMLMDIFGGVLSGAAYAGDVGDQYKVYDRPQDVGHFFLAMKP
                     DLFVPLEEYRARMKILAGRVHGAPRAEGFDEVLMPGEPEARQEARRRRSGIPYSPNDL
                     AALQSEAQRLGLDPLEVSAKPLAA"
     gene            1384..>2290
                     /locus_tag="VHN20_05910"
     CDS             1384..>2290
                     /locus_tag="VHN20_05910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019963014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate/isopropylmalate family dehydrogenase"
                     /protein_id="HEX2725335.1"
                     /translation="MSMSAQSPLRLLVLEGDGIGPEICAATREVLAAAARAAQLEIAY
                     ESATIGFAALRAHGSTVPPDFLARAKAADGVILGPISHNDYPPAAEGGINPSAELRTK
                     LDLFANIRPARSRGGFPPRCGRPVDLVIMRENTEGFYADRSMHLGPGEMMPTPDLAIA
                     VRKVTRLASTRIAEESFRLARRRRSKVTAVHKANVLRVSDGLFLECVREVARRYPDVA
                     YDEKIMDAMAALLVRDASVFDVVVTTNMFGDILSDEASEIAGSLGLAPSLNAGAEHAV
                     AQAQHGSAPDIAGQDRANPSSLIGST"
BASE COUNT          346 a          836 c          784 g          324 t
ORIGIN      
        1 tttcaaagac aggcggaagc cgaggaacga cgaagccgcc cggctcgggt tccgctcgcc
       61 cctctttctc gccaagctgg gtttcgacct gcgcgatcgc tacgatgacc tcctcagcga
      121 gccgctgccg gacgagctcc gccgctcgct cgaccgcctg aacgaacgtc acgccacctc
      181 gtagcgtcct gagaaagcgg caccgccgtt cacgcggcga gcggcttcgc ggagacctcg
      241 agcgggtcga gcccgagcct ttgggcttcc gattgcagcg cagcaagatc gttcgggctg
      301 tagggaattc cgctgcgccg gcgccgcgcc tcctggcggg cttccggctc gcccggcatc
      361 agcacctcgt caaaaccctc ggcacgcggc gcgccatgca cgcgcccggc caggattttc
      421 atgcgcgcgc gatattcctc gagcggcacg aacaggtccg gcttcatggc caggaagaaa
      481 tggccgacgt cctgcggccg gtcataaacc ttgtactggt cgccgacgtc gccggcatag
      541 gcggctcccg acaggacgcc gccaaagatg tccatcagca tggacaggcc cgagcccttc
      601 gggccgccca tcggcagcat cacgccttcg agcgcccggg ccgggtcggt tgtgcgctgg
      661 ccggcgccgt cgagcgccca gtcgtcggga atgcgctcgc cgcgcgtgag cgcgcggcgg
      721 atcttgccgc gcgcgacgag cgagggcgcc atgtcgagca cgaagcggtc gccggcctcg
      781 cccggcgcgc ccgccgcgaa cgggctcgtg ccgagcagcg cctcgcggcc gccccagggc
      841 ggcatcgccg gcgacgcatt cgtgaacacc agcgccacga agccctgctc gacggcctgc
      901 agcacgtagc ttgccgccat gccgaaatgc gtgctgcggc gtgccgagac gatgccgatg
      961 ccgaagcgcc gcgccatgtc gatggccttg tccatggcgc gggtcgcgac caggaaaccg
     1021 aagccgttct ggccgtcgag ggcggcggcg accggcgtga cctcgaccgg cttcaggtcg
     1081 gggcgcctgt tgatcagccc gagcccgagg cgctcgagat atttcggcag ccgggcgacg
     1141 ccgtgcgtgt cgacggcgcg gaggtccgcg cgtacgaggc agtcggcgac gatgcgggcg
     1201 tcctcctccg gcacgtcgtg gcgcgtcagc agggcgacgg cgaaggcgtg gaccttttcg
     1261 gcctgggcat agacgaattc gggcatccaa ctctccggcg cgacacgacg cgtcggtcct
     1321 atacaacgcc gccgggctcg gctagcgacc aggggcaatc tgcgccgaaa accgggagcc
     1381 gccatgtcga tgtcagcgca aagccccttg cggcttctcg tcctcgaagg cgacggcatc
     1441 gggccggaga tctgcgcggc gacccgcgag gtgctcgcgg cggcggcccg ggcggcgcag
     1501 ctggagatcg cctacgagag cgcaaccatc ggcttcgcgg cgttgcgggc gcacgggtcg
     1561 acggtcccgc cggacttcct ggcgcgggcc aaagccgccg acggcgtcat cctcggcccg
     1621 atctcgcaca acgactaccc gccggcggcc gaaggcggga tcaacccgtc ggcggagctg
     1681 cgcaccaagc tcgacctgtt cgccaacatc cggccggcgc gcagccgcgg cggcttcccg
     1741 ccgcgctgcg gccggcccgt cgatctcgtc atcatgcgcg agaacacgga gggattttac
     1801 gccgaccgct cgatgcatct cggccccggc gagatgatgc cgacccccga cctggccatc
     1861 gccgtgcgca aggtcacgcg cctcgcctcg acgcggatcg ccgaggaatc cttccgcctg
     1921 gcgcggcgcc gccgcagcaa ggtcaccgcc gtgcacaagg ccaacgtgct gcgcgtctcg
     1981 gacgggttgt tcctcgaatg cgtgcgcgag gtggcgcgcc gctatcccga cgtcgcctat
     2041 gacgagaaga tcatggatgc catggccgcg ctcctcgtgc gcgacgccag cgtcttcgac
     2101 gtcgtggtca ccaccaacat gttcggcgac atactctcgg acgaggcctc ggagatcgcc
     2161 ggcagcctcg gtctcgcgcc ctcgctcaat gccggcgctg agcacgcggt cgcccaggcg
     2221 cagcacgggt cggcgcccga catcgccggg caggaccgcg ccaacccgtc gtcgctgatc
     2281 ggctcgacgg
//
LOCUS       DATAIQ010000349         3401 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_295832, whole genome shotgun sequence.
ACCESSION   DATAIQ010000349 DATAIQ010000000
VERSION     DATAIQ010000349.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3401)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3401)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3401
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_295832"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..123
                     /locus_tag="VHN20_05915"
     CDS             <1..123
                     /locus_tag="VHN20_05915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012317723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="modification methylase"
                     /protein_id="HEX2725336.1"
                     /translation="ALAQGLPACNGWTFWHVERKGRLVVIDEFRAKLRESMKNE"
     gene            complement(190..1287)
                     /gene="mutY"
                     /locus_tag="VHN20_05920"
     CDS             complement(190..1287)
                     /gene="mutY"
                     /locus_tag="VHN20_05920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018263084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004844 - uracil DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HEX2725337.1"
                     /translation="MATTTAGTAGPDARDLLTWYDRHRRHLPWRARPGETPDPYRVWL
                     SEIMLQQTTIAAVRPYYLAFLGRFPSVEALAEAPVDSVMQAWAGLGYYSRARNLHACA
                     KAVVGQHGGRFPGSERALLELPGIGPYTAAAIAAIAFDEPAAAVDGNVERVVSRLFMV
                     EEPLPKAKRRLKGLTQSLVPADRPGDFAQALMDLGATICAPKRPLCALCPWMAACAAR
                     AEGLQEAFPRKAEKPERALRRGAAFVALRSDDAILLRTRPPSGLLGGMAEPPTSPWGA
                     DYEPAGALADAPLAADWRRLPGVVRHTFTHFPLELTVYLGTVAADVPAPDAMRWTPRA
                     ALQDEALPNVMKKVLAHGLGGALPTARANRQ"
     gene            1345..1845
                     /locus_tag="VHN20_05925"
     CDS             1345..1845
                     /locus_tag="VHN20_05925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003601118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DciA family protein"
                     /protein_id="HEX2725338.1"
                     /translation="MARPKALADLVDRCLGPTLAAQGFAASDVIVAWPEIVGGRLAAW
                     TRPIRIEWPRRRADADPDARPEPATLVVRVESAFAIEMQHLAPVVMERVNAYFGWRCI
                     GRLVLKQGPVHKPAPAKPAPRPLDEEERRRLADAVAPIGEDELRGALDRLGQAVIARQ
                     SGARRS"
     gene            1870..2070
                     /locus_tag="VHN20_05930"
     CDS             1870..2070
                     /locus_tag="VHN20_05930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725339.1"
                     /translation="MQNLQYYSDLWQLVGQLWTVGSALVFLVLLFGFGYNRFSRVQRK
                     RADRAGDRGSPDRATPAPGTKP"
     gene            2145..2786
                     /locus_tag="VHN20_05935"
     CDS             2145..2786
                     /locus_tag="VHN20_05935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017486422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HEX2725340.1"
                     /translation="MITRREMLALLGSTIAASALAASLPALAQDTVSVEDLAVPGPLG
                     DVALGPADAKVTIIEYASLTCSHCAAFHKDTYPVLKQRYIDTGKVRFILREFPLDVLA
                     TAGFMLARCEGDSRYYPVVDMLFAQQRGWAFSDKPLEGLQQMMRQAGFSQEKFESCLR
                     DAKLRDGVNAVRSRATDKFKISSTPTFFINGRRYSGNMSIDELEKVIKPLLGA"
     gene            2805..>3401
                     /locus_tag="VHN20_05940"
     CDS             2805..>3401
                     /locus_tag="VHN20_05940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018407480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006302 - double-strand break repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX2725341.1"
                     /translation="MKLTRLRIIGFKSFVEPTDVPIEPGLTGIVGPNGCGKSNLVEAL
                     RWVMGESSHKNMRASGMDDVIFSGSANRPARNTAEVMLTVDNEQRLAPAAFNDAETLE
                     VSRKIEREEGSLYRINGREVRARDVQILFADAATGARSPALVRQGQISEIIAAKPQAR
                     RRILEDAAGIAGLHARRHEAELRLKAAEDNLLRVDDVLR"
BASE COUNT          532 a         1179 c         1177 g          513 t
ORIGIN      
        1 gccctcgccc agggcctgcc ggcgtgcaac gggtggacct tctggcacgt cgagcgcaag
       61 gggcggctgg tcgtgatcga cgagttccgc gccaagctgc gcgaatcgat gaagaacgag
      121 tagcagggca gtcggcaaca ggcagtcggc agtcgttgta atcgacgaca gcgccgcttc
      181 gccgactgcc tactgccgat tcgcccgtgc tgtgggcagc gctccgccga gcccatgcgc
      241 caagaccttc ttcatgacgt tgggcagcgc ctcgtcctgc agcgcggcgc gcggcgtcca
      301 gcgcatcgcg tcgggggcag gcacgtcggc cgcgacagtc ccgagataca cggtcagctc
      361 cagcgggaaa tgcgtgaacg tgtggcggac cacgcccggt agccggcgcc agtcagcggc
      421 gagcggggcg tccgccaacg cgccggcggg ctcgtaatcg gcgccccacg ggctcgtcgg
      481 cggctcggcc atgccgccga gcaggcccga cggcgggcgc gtgcgcagca ggatggcgtc
      541 gtcgctgcgc agcgctacga aggcggcgcc gcgccgcagg gcccgctcgg gcttttcggc
      601 cttgcgcggg aacgcctcct gcagcccctc ggcgcgggcg gcgcaggccg ccatccacgg
      661 acacagcgcg cagagcggcc gtttcggggc gcagatcgtg gcgccgagat ccatgagcgc
      721 ctgcgcgaaa tcgccgggcc ggtccgccgg cacgaggctt tgggtcagcc ccttgagccg
      781 ccgcttcgcc ttcggcagcg gctcttcgac catgaacagc cgcgacacga cgcgctcgac
      841 attgccgtcg accgccgccg ccggctcgtc gaaggcgatc gcggcgatcg ccgccgccgt
      901 gtacgggccg atgccgggca gctcgagcaa cgcgcgctcg gagcccggga agcggccgcc
      961 atgctggccg accacggcct tcgcgcaggc atgcaggttg cgggcgcggg aataatagcc
     1021 gagccccgcc caggcctgca tcacgctgtc gacgggcgcc tcggccaggg cctcgaccga
     1081 cgggaagcga ccgaggaagg cgagataata cggacgcacc gccgcgatcg tggtctgctg
     1141 cagcatgatc tcggacagcc agacgcggta cgggtccggc gtttcgccgg gccgcgcccg
     1201 ccacggcagg tggcggcgat ggcggtcata ccaagtcaga aggtcgcggg cgtcgggccc
     1261 tgcggtcccg gcagtggtgg tggccatgcg cccgtgatag caacgcggca acggtaatca
     1321 acgcggcgtt tgcacgggtt tcacatggct cgcccgaaag ccctggccga tcttgtggac
     1381 agatgcctcg ggccgacgct cgcggcgcaa ggctttgccg cgtccgacgt gatcgtcgcc
     1441 tggccggaga tcgtcggcgg ccggcttgcc gcctggaccc ggccgattcg catcgaatgg
     1501 ccgcgccggc gcgccgacgc cgatccggac gcccggcccg agccggccac cctggtggtc
     1561 cgcgtcgaga gcgccttcgc catcgagatg cagcacctcg ctccggtcgt gatggagcgg
     1621 gtcaacgcct atttcggctg gcgctgcatc ggccggctcg tgctcaagca gggccctgtc
     1681 cacaagccgg ccccggccaa gccggccccg cggcctttgg acgaggagga gcgccgccgg
     1741 ctcgccgatg cggtggcccc gatcggcgag gacgagctgc gcggggccct ggaccggctc
     1801 ggccaggccg tgatcgcccg gcaaagcggg gcacggcgga gctaggcgcg tcgagccctg
     1861 gggggcctca tgcagaattt gcagtactat tcggatctgt ggcagctggt cgggcagctc
     1921 tggaccgttg gttctgccct ggtgtttctc gtcctcctgt tcgggttcgg ctacaacagg
     1981 ttttcgcgcg tccagcggaa gcgggccgac cgtgccggcg atcgcggctc gcccgacagg
     2041 gctacgcctg ccccgggaac gaaaccgtga cagcaacgcg ccttgccaca atcagcccga
     2101 agtcttagcg caaggcgaaa ccttctacga ttggagcaac tttcatgatc acgcggcgcg
     2161 agatgctggc ccttctgggc tcgacgattg ccgccagcgc cctggccgcc agcctgcctg
     2221 ccctggccca ggacacggtt tcggtcgagg atcttgccgt ccccgggccg ctcggcgacg
     2281 tggcgctggg gccggcggac gccaaggtga cgatcatcga atacgcttcg ctcacctgct
     2341 cgcattgcgc cgccttccac aaggatacct atccggtcct gaagcagcgc tacatcgaca
     2401 ccggcaaggt gcgcttcatc ctgcgcgagt tcccgctcga cgtgctcgcc acggccggct
     2461 tcatgctggc gcgctgcgag ggcgattcgc gctactaccc ggtcgtcgac atgctgtttg
     2521 cacagcagcg cggctgggcc ttttccgaca agccgctcga aggccttcag cagatgatgc
     2581 ggcaggccgg tttttcacag gaaaaattcg agtcgtgctt gcgcgacgcg aagctccgtg
     2641 acggcgtcaa cgccgttcgc agccgcgcca ccgacaagtt caagatcagt tccacgccga
     2701 cgtttttcat caatggccgc cgctattccg ggaacatgtc aattgacgag cttgagaagg
     2761 tcatcaagcc gctgcttggg gcttaaccac cgggaggcgt gcgtatgaag ctgacgcgcc
     2821 tccgcatcat cggcttcaaa tcgttcgtcg aaccgaccga cgtgccgatc gagccgggcc
     2881 tgaccggcat cgtcgggccg aacggctgcg gcaagtcgaa ccttgtcgaa gctttgcgct
     2941 gggtgatggg cgaaagctcg cacaagaaca tgcgcgcgtc cggcatggac gatgtgatct
     3001 tctccggatc cgccaaccgt ccggcgcgca acaccgccga ggtgatgctc acggtcgaca
     3061 acgagcagcg gctggcgccg gcggcattca acgacgccga gacgctcgag gtgtcgcgca
     3121 agatcgaacg cgaggaaggc tcgctttacc gcatcaacgg ccgcgaggtg cgcgctcgcg
     3181 acgtgcagat cctgttcgcc gacgcggcca ccggcgcgcg ctcgccggcg ctcgtacgcc
     3241 agggccagat cagcgagatc atcgcggcca agccccaggc ccgccgccgc atcctcgagg
     3301 acgcggccgg gatcgccggc ttgcacgcgc gtcggcacga ggcagagctg cggctcaagg
     3361 ccgccgagga caacctgctg cgcgtcgacg acgtgctgcg c
//
LOCUS       DATAIQ010000350         1733 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_433838, whole genome shotgun sequence.
ACCESSION   DATAIQ010000350 DATAIQ010000000
VERSION     DATAIQ010000350.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1733)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1733)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1733
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_433838"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1106)
                     /locus_tag="VHN20_05945"
     CDS             complement(<1..1106)
                     /locus_tag="VHN20_05945"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX2725342.1"
                     /translation="MSPSDPQQTRGFGLILILAIATFASTYSARTAEPLVGLIARDLA
                     SNAETIALVTTAFALPYAFIQPILGPVGDSLGKERVIIISLGVMVVALVASAFAADAG
                     TLLALRVLSGAAAGGIIPAALATVGDRIDMARRQVAVSRLMMAVVVGQLCGSSVSGFL
                     AQWIGWRGVFLLASAVALCAGLAMLATFGLAARARSRLSVRGAITRYREIIGIGRARA
                     LYAFVFIEAITIYGIFPYIAPIFEERRLGGPFEAGIVLASFGVGGLLYALLVRQMMRL
                     GLKRLLVGGGIVVALASLILALAADWRIDIVAMILSGFGFYMLHNPFQTQVTEVAPQS
                     RASAVSLHAFSFFAGQALGVVVIGVGLRSIGLLGT"
     gene            complement(1109..>1733)
                     /gene="kdsA"
                     /locus_tag="VHN20_05950"
     CDS             complement(1109..>1733)
                     /gene="kdsA"
                     /locus_tag="VHN20_05950"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018391228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008676 - 3-deoxy-8-phosphooctulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HEX2725343.1"
                     /translation="IGLDEAMPIFAEVKDRLGLPVTTDVHEIEQCAPVAEVVDILQIP
                     AFLCRQTDLLVAAARTGRVVNVKKGQFLAPWDMANVARKITEAGNRNVMVTERGASFG
                     YNTLVSDMRSLPIMAQTTGAPVIFDATHSVQQPGGQGTTSGGQREFVPVLARAAVAVG
                     VAGVFIETHQDPDKAPSDGPNMVPLKDLEKLLAELKDFDALAKRHPG"
BASE COUNT          300 a          587 c          620 g          226 t
ORIGIN      
        1 gtgcccaata ggccgatgct gcgcaggccg acgccgatca cgaccacgcc gagcgcctgc
       61 ccggcgaaga acgagaaggc gtgcagggac acggccgacg cgcgcgattg cggcgccacc
      121 tcggtgacct gggtctggaa ggggttgtgc agcatgtaga agccgaagcc cgacaggatc
      181 atcgccacga tgtcgatccg ccaatccgcc gcgagcgcga ggatcagcga tgcgagcgcc
      241 accacgatgc cgccgcccac cagcagccgc ttcagcccga gccgcatcat ctggcgcacg
      301 agcagcgcat agaggaggcc gccgaccccg aagctggcga gcacgatgcc cgcctcgaac
      361 gggccgccga ggcgacgctc ctcgaagatc ggcgcgatat acgggaagat gccgtagatc
      421 gtgatcgcct cgatgaacac gaacgcatag agcgcgcgcg cccggccgat gccgatgatc
      481 tcgcgataac gcgtgatggc gccgcgcacc gacaggcgcg agcgggcgcg cgcggcgagc
      541 ccgaacgtgg cgagcatcgc cagcccggca caaagcgcca cggcgctggc caggaggaac
      601 accccgcgcc agccgatcca ctgcgcgagg aagccggaga cggacgagcc gcagagctgg
      661 ccgacgacga cggccatcat caggcggctc acggccacct gccgacgcgc catgtcgatg
      721 cggtcgccga cggtcgccag cgcggcgggg atgatgccgc ccgcggccgc tcccgacagc
      781 acgcgcaggg ccagcagtgt cccggcgtcg gcggcgaagg cggaggcgac gagcgccacg
      841 accatcacgc cgaggctgat gatgatcacg cgctccttgc cgaggctgtc gccgaccggg
      901 ccgaggatcg gttggatgaa ggcgtaaggc agcgcgaacg ccgtcgtgac gagcgcgatg
      961 gtctcggcgt tgctggcgag atcgcgcgcg atcagcccga ccagcggctc ggccgtgcgc
     1021 gccgagtagg tgctcgcaaa ggtcgcgatg gcgaggatca ggatcagccc gaaaccgcgt
     1081 gtctgctgcg ggtcggacgg agacatgctc atcccgggtg gcgcttggcg agcgcgtcga
     1141 agtccttcag ctcggcgagc agcttttcga ggtccttcag gggcaccatg ttgggtccgt
     1201 cggacggcgc cttgtcggga tcctgatggg tttcgatgaa cacgccggcc acgccgacgg
     1261 cgacggcggc acgcgccagc accggcacga actcgcgctg gccgcccgac gtggtcccct
     1321 ggccgcccgg ctgctgcacg gaatgcgtcg cgtcgaagat caccggcgcg ccggtcgtct
     1381 gcgccatgat cggcagcgaa cgcatgtctg acacgagggt gttgtagccg aacgaggcgc
     1441 cgcgctcggt caccatcacg ttgcggttgc cggcctcggt gatcttgcgc gccacgttgg
     1501 ccatgtccca tggcgccagg aactgcccct tcttgacgtt gaccacgcgg ccggtgcggg
     1561 ctgcggcgac gagcagatcg gtctggcggc acaggaacgc agggatctgc aggatgtcga
     1621 cgacctcggc caccggcgcg cattgctcga tctcgtgcac gtcggtcgtg accggcaggc
     1681 cgaggcgatc cttgacctcg gcgaagatcg gcatggcttc gtcgaggccg atg
//
LOCUS       DATAIQ010000351         2917 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_387614, whole genome shotgun sequence.
ACCESSION   DATAIQ010000351 DATAIQ010000000
VERSION     DATAIQ010000351.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2917)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2917)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2917
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_387614"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            396..1559
                     /locus_tag="VHN20_05955"
     CDS             396..1559
                     /locus_tag="VHN20_05955"
                     /inference="COORDINATES: protein motif:HMM:NF013847.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxyalkane--coenzyme M transferase"
                     /protein_id="HEX2725344.1"
                     /translation="MKTSADRILTTHTGSLPRPPHLVSLYTRRWRGEAVDPAELAAAG
                     KAAVRAVVAKQNESGIDIANNGEQQREAFFLHMRDRMSGFGGRWKRPPRADIERYPAF
                     KELMERQAAVREAVSVHQPPKVIGDVRYIDPSTAELEPRDFRETLNDLDARFVETFLT
                     APSPGIIATAVKNEHYDSEESYLAALAEALRVEYEAIVRNGFLLQVDCPDLALERHIT
                     FSDRPDQEFVAFVDRVVAAINHAIRNIPKDRVRLHVCWGNYEGPHDCDVPFETIWPSI
                     KQARVGAFVLPFANPRHAHETRILKSNPVADDQAVVAGVVDTLTNLVEHPEVVAERLE
                     KVARAVGDPRRVQAGTDCGFDTSAGAGRVAEDVVWAKLRAMRDGARLASDRLF"
     gene            1718..2698
                     /locus_tag="VHN20_05960"
     CDS             1718..2698
                     /locus_tag="VHN20_05960"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEX2725345.1"
                     /translation="MLKMKHVAVLCALLLIGALTGPVMAQGYPTKTVRIVVPYTPGGP
                     ADLLARGLAQKLSDEWGQPVIVDNRPGANEIIAAELVAKAPPDGYTFLLASDAVFSLN
                     TYLYSKLPYDAVKNFAPVSKLVLANLMLVTRPDFPGKTVQDLIAQAKQNPGKLTYGSV
                     GAGGVNHLAMAWVTTVKGLQMEHIPYKGLVQALQDIAAGRVDTMYAVIGGARPLIAAG
                     QIRGIAVSGKTRSPILPDVPTFAEAGEPDLDASFYFGVAAPSGTPNEAIQKFASAAGR
                     IVNAPEFTEKYLVNLGFQPVGDTPEQFAAFLVTDRKAAADKVKASGAKLD"
BASE COUNT          501 a         1028 c          948 g          440 t
ORIGIN      
        1 aagctcaacg ccgccacgcg cagccacacg cgcaaggctt cgcggagcga cacgccgtgc
       61 gcgggcatat gggttgcgga agatgtcggt ggtgacgcgt ccatgatccc ttccctcggc
      121 cgagcggccg ccggtcaggg cagagcttgg acgcaaggcg tctttcagga aagcggggcg
      181 tctgccgaaa gccccgcatc gcaaggttag caaggtgcga ttgccatcac aaggctgcac
      241 cgtttccgag gaacggcaca cccccgtgca cgggcgctgc acgtgtgtag cgcgacacct
      301 gacctcttta cgcggtctgc ggttccgatt ctcatggaac tgcgcccgct gctgggttag
      361 gggctctctg aaccgcgcac cgcacgagga cgtgagtgaa aaccagcgct gaccgcatcc
      421 tgacaacgca taccggaagc ttgccccggc cgccgcatct cgtcagcctc tacacccgcc
      481 gctggcgcgg cgaggccgtc gacccggccg agctggccgc ggccggaaag gccgcggtgc
      541 gcgccgtcgt cgcgaagcag aacgagagtg ggatcgacat cgccaacaac ggcgagcagc
      601 agagagaggc gttcttcctg catatgcgcg accgcatgag cggcttcggc gggcgctgga
      661 agcggccgcc gcgcgccgat atcgaaagat acccggcctt caaggaactc atggagcggc
      721 aagcggcggt ccgcgaggcc gtcagcgtgc accagccacc caaggtgatc ggtgacgtcc
      781 gctacatcga cccgtccacc gccgagctgg agccgcgcga tttccgcgag acgctgaacg
      841 atctcgatgc gcgcttcgtc gagacctttc tgacggcgcc gtcccccggc atcatcgcga
      901 cggcggtcaa gaacgagcat tacgacagcg aggagagcta ccttgccgcc ctcgccgaag
      961 cgctcagggt cgaatacgag gccatcgtcc gcaacggctt tctcctccag gtcgactgcc
     1021 ccgatctcgc gctcgagcgt cacatcacct tcagcgaccg gccggaccaa gagttcgtcg
     1081 ccttcgtcga ccgcgtcgtc gccgccatca accacgccat tcgcaacatc ccgaaggaca
     1141 gggtccggct gcatgtgtgc tggggcaact acgagggccc gcacgattgc gacgtgccct
     1201 tcgagacgat ctggccttcg atcaagcagg cgcgcgtcgg cgcgttcgtg ctgcctttcg
     1261 ccaatccgcg ccacgcccac gagacccgta tcctgaagtc gaaccccgtc gccgacgacc
     1321 aggccgtcgt cgccggcgtc gtcgacacgc tgaccaatct cgtcgagcat cctgaggtcg
     1381 tcgccgagcg cctcgagaag gttgcgcgcg cagtcggcga cccgcgcagg gtgcaggccg
     1441 gcacggactg cggcttcgac acctcggccg gcgcgggacg ggtcgccgag gacgtcgtct
     1501 gggccaagct gcgcgccatg cgcgacggcg cccggctggc gtcggaccgc ctgttctaga
     1561 gcaacctgcg gcgcgcggcc cgaggacgaa ggcgcagttc ccttgggagc tcccacttag
     1621 gttgtttccc agcgcggcgg atgccgctaa caaggctgcc gacgtggcac gcacgagaaa
     1681 aaccccgtgc ccgaccggag cccaagggag agtgttgatg ctcaagatga aacatgtcgc
     1741 ggtcttgtgc gcgctgctgc tgatcggcgc gctgaccggg cccgtgatgg cgcagggcta
     1801 tccgaccaag acggtgcgca tcgtcgtgcc gtataccccc ggcgggccgg ccgacctgct
     1861 cgctcgcggg ctcgcccaga agctgagcga cgagtgggga cagccggtga tcgtcgacaa
     1921 ccgtcccggc gccaacgaga tcatcgcggc cgagctcgtc gccaaggctc cgccggacgg
     1981 ctacacgttc ctgctcgcct cggacgccgt gttcagcctg aacacctatc tctattccaa
     2041 gctgccttac gacgccgtca agaacttcgc gcctgtctcg aagctcgtgc tcgccaatct
     2101 gatgctcgtg acccgccccg acttccccgg caagacggtc caggacctga ttgcgcaagc
     2161 caagcagaat cccggcaagc tgacctacgg gtcggtcggc gccggcggcg tcaatcacct
     2221 cgccatggcc tgggtcacca ccgtgaaagg cctgcagatg gagcacatcc cctacaaagg
     2281 gctggtgcag gcgctccagg acatcgccgc cggccgcgtc gacaccatgt atgcggtgat
     2341 cggcggcgcc cgtccgctca tcgcagcggg tcagatccgg gggatcgcgg tttccggaaa
     2401 gacgcgctcg ccgatcctgc cggacgtgcc gaccttcgcg gaagccggcg agccggacct
     2461 ggacgcgtcg ttctacttcg gggtcgcggc gccaagcgga acgcccaacg aggcgatcca
     2521 gaaattcgcc tccgcggcag gccgcatcgt caacgcgccc gagttcacgg aaaaatacct
     2581 ggtcaatctc ggcttccagc cggtcggcga cacgccggag cagttcgccg cgttcctcgt
     2641 cacggaccgc aaggccgcgg ccgacaaggt caaggcgtcg ggcgccaagc tcgactgatc
     2701 ctgccgggcg ggacgcgtcc ccgcgcgccc cgcctctcgc agcggcccgg cgcctgagag
     2761 cgggaccaat ctcgagcgca cggagcttgc ggcgtgaaga tccgcatcga caacccgaag
     2821 gatttctggc tcggcggcgt ttacctgctc gccggcgcgg cggccttgta tctgggcgtc
     2881 gactacccgc tcggccggcc cggccgcatg ggcccgg
//
LOCUS       DATAIQ010000352         2840 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_111040, whole genome shotgun sequence.
ACCESSION   DATAIQ010000352 DATAIQ010000000
VERSION     DATAIQ010000352.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2840)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2840)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2840
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_111040"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     regulatory      164..268
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            257..1255
                     /gene="thiO"
                     /locus_tag="VHN20_05965"
     CDS             257..1255
                     /gene="thiO"
                     /locus_tag="VHN20_05965"
                     /EC_number="1.4.3.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011472619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016647 - oxidoreductase activity, acting
                     on the CH-NH group of donors, oxygen as acceptor [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine oxidase ThiO"
                     /protein_id="HEX2725346.1"
                     /translation="MQQSQAVTVVGAGVAGSWQALLFAKAGHKVTVFERGDSSHRQAA
                     GYWAGGMLAPDCEAETAEPVVTRLGRRSLDLWRAHLPDVSSNGSLVVAHPRDRADYER
                     FARLTSGYERVDTQRIGELEPALAGRFRDGLFFAEEAHVEPRQVLSLLHRALEAAGGM
                     IHFGQAVDPRDVEGTVIDCRGLAARDVFPDLRGVRGEIIVVETADVALSRPVRLIHPR
                     WPLYIVPRPNGRYLIGATTIESEDGGGVTVRSALELLTAAYTVHPAFGEARIIELGAG
                     LRPAFPDHAPRIQVDGARIAINGLYRHGFLLAPALAELTVNYIRQGMRDNEVMRWS"
     gene            1246..1443
                     /gene="thiS"
                     /locus_tag="VHN20_05970"
     CDS             1246..1443
                     /gene="thiS"
                     /locus_tag="VHN20_05970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018640991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur carrier protein ThiS"
                     /protein_id="HEX2725347.1"
                     /translation="MVLTINGEHQEVAATTIPALLQELDYDGEFLVVAVNHDVVQRRR
                     WDEVELKAGDRIEILTPRQGG"
     gene            1466..2248
                     /locus_tag="VHN20_05975"
     CDS             1466..2248
                     /locus_tag="VHN20_05975"
                     /EC_number="2.8.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011503821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1990107 - thiazole synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiazole synthase"
                     /protein_id="HEX2725348.1"
                     /translation="MKLYGQDIGSRLLIGTALYPSPAIMEDAIRASGAEIVTVSLRRE
                     AGGGKAGNAFWQIISSLGVKVLPNTAGCRSVREAVTTAQMARELFNTPWVKLEVIGDD
                     ETLQPDVVGLVEAADILARDGFEVFPYCTEDLTVVGRLIDVGCQVVMPWASPIGSAKG
                     LLNPYLLKTLRTRFPDVPMIIDAGLGAPSHAATALEMGFDAVLLNTAVAKAQDPVAMA
                     RGFKLAVEAGRLGYEAGLMEARDFASPSTPVVGTPFWHAATS"
     gene            2232..>2840
                     /locus_tag="VHN20_05980"
     CDS             2232..>2840
                     /locus_tag="VHN20_05980"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012564165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004789 - thiamine-phosphate
                     diphosphorylase activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HEX2725349.1"
                     /translation="MPQHPDRFYPIVDSLAWIGRLVRLGVGTVQLRAKDLSPDAALTL
                     VREAVALTRGTRTELIVNDYWRAAIAAGARHVHLGQEDLAEADVAAIRAAGLTLGLST
                     HDDDELATALRQRPDYVALGPIYPTTLKAMRFGPQGLERIGQWKRRIGTTPLVAIGGI
                     TLERAPGAFAAGADCIAVVSDVTQSADPDKRVRDWLETTDMIE"
BASE COUNT          427 a         1000 c          983 g          430 t
ORIGIN      
        1 ggtcgtcaag ggagcctccg gcaaggtcga aggcatcgtg acgcccctcg atgtgctcag
       61 ggcgatcatg accccctccc ctcctcccgc gcaagcgggt gccccgcagc aggcgccatc
      121 gtgatcccgg ggcttgcttc gcaggccgtc ctgccccatt ttggcgccat ccgaggggtg
      181 ccctgccggg ctgagacggt gctttgacac cgaacccttt gaacctgatc cgattcgtat
      241 cggcggaggg acgggaatgc agcaatcaca ggcggtcacg gttgtcggcg caggcgtcgc
      301 cggcagctgg caggccctgc ttttcgccaa ggccggccac aaggtgaccg tgttcgagcg
      361 cggcgactcg agccaccgcc aagcggcggg ctactgggcg gggggcatgc tggcgcccga
      421 ttgcgaggcc gagacggcgg agccggtcgt cacccggctc ggccgccgct cgctggatct
      481 gtggcgggcg cacctgccag acgtgtccag caacggctcg ctggtcgtgg cgcacccgcg
      541 cgaccgcgcc gattatgagc gcttcgcccg cctcaccagc ggctacgagc gggtcgacac
      601 tcaacgcatc ggcgagctgg agccggcgct ggccgggcgc ttccgcgacg gcctgttctt
      661 cgccgaagag gcgcatgtcg agccgcgtca ggtgctgtcg ctgctgcacc gcgcgctcga
      721 agcagccggc ggcatgatcc atttcggcca agcggtcgac ccgcgcgatg tcgagggaac
      781 ggtgatcgat tgccgcggcc ttgccgcccg cgacgtgttc ccggatctgc gcggcgtgcg
      841 cggcgagatc atcgtcgtcg agacggcgga cgtggcgctg tcgcggccgg tgcgcctgat
      901 ccatccgcgc tggccgctct acatcgtgcc gcggcccaac ggccgctatc tgatcggcgc
      961 gacgacgatc gagagcgagg atggcggcgg cgtcaccgtg cgctcggcgc tcgagctcct
     1021 gaccgccgcc tacaccgtgc acccggcgtt cggggaagcg cgcatcatcg agctcggcgc
     1081 cggcctgcgc ccggccttcc ccgatcacgc gccgcgcatc caggtcgacg gcgcgcgcat
     1141 cgcgatcaac ggcctttacc gccacggctt cctgctcgcg ccggctttgg ccgagctgac
     1201 cgtgaactac ataaggcagg gcatgcgcga caacgaggtg atgcgatggt cctgaccatc
     1261 aacggcgagc atcaggaggt cgccgcgacg acgatccctg ccctgctgca ggagctcgac
     1321 tatgacggcg agtttctggt cgtggccgtc aatcacgacg tggtgcagcg ccggcgctgg
     1381 gacgaggtcg agctcaaggc cggcgaccgg atcgagatcc tcacccctcg ccagggcggc
     1441 tgacaagacg gcggacggag aagcaatgaa gctctacgga caagacatcg gatcgcgact
     1501 cctgatcgga accgcgctct atccctcgcc ggcgatcatg gaggacgcga tccgcgcgtc
     1561 cggcgccgag atcgtgaccg tatcgctgcg ccgcgaggcc ggcggcggca aggccggcaa
     1621 cgcgttctgg cagattatct cctcgctcgg cgtcaaggtg ctgccgaaca cggccggctg
     1681 ccgcagcgtg cgcgaggcgg tgacgacggc gcagatggcg cgcgagctgt tcaacacgcc
     1741 gtgggtcaag ctcgaggtga tcggcgacga cgagacgctg cagccggacg tggtcgggct
     1801 cgtcgaggcg gccgacatcc ttgcgcgcga cggtttcgag gtgtttccct actgcaccga
     1861 ggatctcacc gtggtggggc ggctgatcga cgtcggctgc caggtcgtga tgccgtgggc
     1921 gtcgccgatc ggcagcgcca aaggcctcct caacccgtat ctcctgaaga cgctgcgcac
     1981 gcgcttcccg gacgtgccga tgatcatcga cgcgggcctc ggcgccccct cgcacgccgc
     2041 tacggcgctc gagatgggat ttgacgcggt gctgctcaac accgccgtcg cgaaggcgca
     2101 ggatccggtc gcgatggcgc gcggcttcaa gctcgccgtc gaagccggcc ggctcggcta
     2161 tgaggccggg ctgatggaag cgcgcgactt cgcctcgcca tcgacgccgg tcgtcgggac
     2221 gccgttctgg catgccgcaa catcctgacc gtttctatcc gatcgtcgac agcctcgcct
     2281 ggatcggacg cctggtccgg ctcggcgtgg gcaccgtgca gctgcgcgcc aaggaccttt
     2341 cgcccgacgc ggcgctgacg ctcgtgcgcg aggcggtcgc gctgactcgc ggcacgcgca
     2401 ccgaactgat cgtcaacgat tactggcgcg cggcgatcgc cgccggcgcg cgacacgtgc
     2461 atctcggcca ggaggatctg gccgaggccg acgtggctgc gatccgcgcc gccggcctca
     2521 cgctcggcct ctccacccac gacgacgacg agctcgccac cgcgctgcgc caaaggcccg
     2581 actacgtcgc tctcgggccg atctacccga ccaccctcaa ggccatgcgt ttcgggccgc
     2641 aagggctgga gcgcatcggc caatggaagc gccgcatcgg cacgaccccg ctcgtcgcca
     2701 tcggcggcat cacgctcgag cgcgcgccgg gcgcgttcgc ggccggcgcc gattgcatcg
     2761 ccgtcgtcag cgacgtgacg cagagcgccg atccggacaa gcgcgtgcgc gattggctcg
     2821 agacaaccga catgatcgaa
//
LOCUS       DATAIQ010000353         1892 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_54604, whole genome shotgun sequence.
ACCESSION   DATAIQ010000353 DATAIQ010000000
VERSION     DATAIQ010000353.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1892)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1892)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1892
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_54604"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(199..1308)
                     /locus_tag="VHN20_05985"
     CDS             complement(199..1308)
                     /locus_tag="VHN20_05985"
                     /inference="COORDINATES: protein motif:HMM:NF012401.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite oxidase"
                     /protein_id="HEX2725350.1"
                     /translation="MNAAVTSRDTHRLGQTELRVVPDAALNAWTPVPLLDSPITPVER
                     FFIRNNGETPNLDEADIDGWRLTIDGEVRSPLSLSLEDLRRFETVTLTAVLECAGNSR
                     CHFTPPTDGLPWGDGAVGCARWTGVRLGDLLAAAGLTGRAVYTGFFSPDRETDGSGPA
                     LSRGLPIRKAQARETLVAFAMNDRPLSLLHGAPLRIVAPGFPGSAWQKWLQRIWVRDR
                     EHDGMKMTGFDYRLPTRPVAPGETPDEAEMAVIEDMPVKSLITIPAEGAELRAGAAAG
                     VSGFAWSGHTPVARVEVSADGGQTWRAAALETAPDTFAWRRFNFRWTPTTPGPAQLIA
                     RATDEAGRAQPLEAPWNPKGYCNNQCHRVSVTVAG"
     gene            1608..>1892
                     /locus_tag="VHN20_05990"
     CDS             1608..>1892
                     /locus_tag="VHN20_05990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725351.1"
                     /translation="MAPPLILASDLTSPSDISATSFESAPPAPGDDITVNAGVTVRSP
                     GGRVVVQAGDSIALQAGSLVQSDVDEVVLQAAAGDNDFLGGITLAGSISAG"
BASE COUNT          277 a          669 c          656 g          290 t
ORIGIN      
        1 ccttcatcgg cacggccgca ttcacggata cgggccagct ccgcttcacc gctggcaccg
       61 gcgctacccg catcctcctc aataccgatg ccgatgccgc cgccgaagcg gtgatcctgg
      121 tgcgcggcgt ccatgcaccg agcgcgagct ggttcgggct ttagccgcgc aggccgcggg
      181 acgccgtccg ggatgacgtt atccggcgac cgtgacgctg acccggtgac actggttgtt
      241 gcagtagccc ttcgggttcc acggcgcttc gaggggctga gctcggccgg cttcgtcggt
      301 ggcgcgcgcg atcagctgcg ccggcccggg cgttgtcggc gtccagcgaa agttgaagcg
      361 ccgccaggcg aacgtgtcgg gcgccgtctc gagcgcggcg gcgcgccacg tttgcccgcc
      421 atccgccgac acctcgacgc gcgcgacggg cgtatgtccc gaccacgcga agccggaaac
      481 ccctgccgcg gcgccggcgc gcagctccgc gccctccgcc ggaatcgtga tcagcgactt
      541 gaccggcatg tcctcgatca ccgccatctc ggcctcgtct ggcgtctcgc cgggcgccac
      601 cggtcgcgtc ggcaggcggt agtcgaagcc ggtcatcttc atgccgtcgt gctcgcggtc
      661 gcgcacccag atgcgttgca gccatttctg ccaggccgag cccgggaagc ctggcgcgac
      721 gatgcgcaaa ggtgcgccgt gcagtagcga caatggccgg tcattcatgg cgaaggcgac
      781 cagcgtctcg cgcgcctggg ccttgcggat cggcaggccg cgcgacaggg cagggccgct
      841 gccatcggtc tcgcggtccg ggctgaagaa gcccgtgtag acggcccgac cggtcaggcc
      901 cgcggccgcg aggaggtcac ccaggcgcac acccgtccag cgcgcgcagc cgaccgcgcc
      961 atcgccccac ggcagcccgt cggttggcgg cgtgaaatgg cagcggctgt tgccggcgca
     1021 ttcgagcacc gccgtcagcg tgacggtctc gaagcgccga aggtcttcga gactcaggct
     1081 cagcggcgac cgcacctcgc cgtcgatggt gagacgccag ccgtcgatgt ccgcttcgtc
     1141 gagattcggc gtttcgccgt tgttgcggat gaagaagcgc tcgacgggcg tgatcggcga
     1201 atcgaggagc ggcaccggcg tccaggcgtt gagggccgca tccggcacga ccctgagttc
     1261 ggtttgtcca agacggtgcg tatcgcgcga ggtcacagca gcattcatga gccgctctgt
     1321 gccagcgcga gccgccgccg tctactgcgc gggcgcccaa ggatccggtg ctgcgcggag
     1381 cacgccgccg gggacctccg tctgccgccc cgatcgtctt gaccgcgact tttttcctgc
     1441 caggatgccc gtccctggcc gggcaggggg gaaacgacgc ccttcacgaa cgctgatcgg
     1501 ggcgcatcgc gaccgcgatg cgcttccagc gagcgccttt gcgcgcgctg acgcacacaa
     1561 tggggcgttc aagtccccgc ataacgaggc atccggagag gacattcatg gcacccccat
     1621 tgattttggc gagcgacctg accagcccga gcgacatcag cgcgacgtct ttcgagagcg
     1681 cgcctccggc gccgggcgac gacatcaccg tcaatgcggg ggtgacggtg cgctcgcccg
     1741 gcggcagggt ggtggtccag gccggcgata gcatcgcgct gcaggcgggc agcctggtgc
     1801 agtccgatgt cgacgaagtc gtgctccagg ccgccgccgg cgacaatgac ttcctcggcg
     1861 gcatcacgct cgccggcagc atcagcgccg gc
//
LOCUS       DATAIQ010000354         3802 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_434061, whole genome shotgun sequence.
ACCESSION   DATAIQ010000354 DATAIQ010000000
VERSION     DATAIQ010000354.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3802)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3802)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3802
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_434061"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..484
                     /gene="rpsC"
                     /locus_tag="VHN20_05995"
     CDS             <1..484
                     /gene="rpsC"
                     /locus_tag="VHN20_05995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012454030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000312 - plastid small ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HEX2725352.1"
                     /translation="IGKKGADIEKLRKLVASMTNADVTINIVEVRKPEIDSTLVAESI
                     AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARMEWYREGRVPLHTL
                     RADVDYGTATAFTTYGTCGIKVWIVKGEILEHEPMAQDKRLNEEGARSGGRREREHAA
                     "
     gene            512..925
                     /gene="rplP"
                     /locus_tag="VHN20_06000"
     CDS             512..925
                     /gene="rplP"
                     /locus_tag="VHN20_06000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005973000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HEX2725353.1"
                     /translation="MLQPKKTKFRKQFKGRIHGLAKGGTELNFGQFGLKAMEPERVNA
                     RQIEAARRAITREMKRQGRVWIRIFPDVPVTQKPTEVRMGSGKGSPEYWAARVKPGRI
                     MFEIDGVPEAVAREALRLGAAKLPIKTRFIQRIAE"
     gene            931..1143
                     /gene="rpmC"
                     /locus_tag="VHN20_06005"
     CDS             931..1143
                     /gene="rpmC"
                     /locus_tag="VHN20_06005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020094255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HEX2725354.1"
                     /translation="MKSTQRLSDLKAMTPDQLQDELLSLKKEQFNLRFQRATGQLENT
                     SRVRQVRKDIARVRTLQQQKLATAKG"
     gene            1154..1456
                     /gene="rpsQ"
                     /locus_tag="VHN20_06010"
     CDS             1154..1456
                     /gene="rpsQ"
                     /locus_tag="VHN20_06010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019403814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HEX2725355.1"
                     /translation="MPKRVLQGVVVSDKQDKTVVVKVERRFTHPVMKKTVRRSKNYHA
                     HDENNSAKTGDTVFIQESRPYSKLKTWELVSDAAGGTAEQGSGVISKVKSLIGLKG"
     gene            1580..1948
                     /gene="rplN"
                     /locus_tag="VHN20_06015"
     CDS             1580..1948
                     /gene="rplN"
                     /locus_tag="VHN20_06015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011567679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HEX2725356.1"
                     /translation="MIQVQTNLDVADNSGARRVMCIKVLGGSKRKYATVGDIIVVSVK
                     EAIPRGRVKKGDVMKAVVVRTAKDVRRADGSVIRFDKNAAVLINNQKEPVGTRIFGPV
                     PRELRAKNHMKIISLAPEVL"
     gene            1948..2265
                     /gene="rplX"
                     /locus_tag="VHN20_06020"
     CDS             1948..2265
                     /gene="rplX"
                     /locus_tag="VHN20_06020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012384362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HEX2725357.1"
                     /translation="MAAKIKKGDKVVVLTGRDKGRTGEVVQVMPKEARALVRGVNLVK
                     RHQRQTMNQEGGIIQKEAPIHLSNLALADPKDGKPTRVGFKVLDDGRKVRVAKRSGDL
                     IDA"
     gene            2441..2998
                     /gene="rplE"
                     /locus_tag="VHN20_06025"
     CDS             2441..2998
                     /gene="rplE"
                     /locus_tag="VHN20_06025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003613527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HEX2725358.1"
                     /translation="MNVDGYTPRLKKHYEEVVRQKLIEEFGYANPLQVPAIEKIVLNM
                     GVGESTSDSKKASVAAADLALIAGQKAVVTRARKAISTFKVRENMPIGCKVTLRKTRM
                     YEFLDRLVNIALPRVRDFRGLNPKSFDGRGNYALGIKEHIVFPEINYDKAEAIWGMDV
                     IITTTAKTDEEARALLKHFNFPFRQ"
     gene            3050..3355
                     /gene="rpsN"
                     /locus_tag="VHN20_06030"
     CDS             3050..3355
                     /gene="rpsN"
                     /locus_tag="VHN20_06030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018044216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S14"
                     /protein_id="HEX2725359.1"
                     /translation="MSKKSSVEKNNRRKQLAKKYAGKRERLLAIANDEARPMEERFEA
                     RLKLAELPRNGNPTRIRNRCEITGRPRAYYRKLGMSRIALRELGSQGLIPGLVKSSW"
     gene            3366..3764
                     /gene="rpsH"
                     /locus_tag="VHN20_06035"
     CDS             3366..3764
                     /gene="rpsH"
                     /locus_tag="VHN20_06035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014890749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HEX2725360.1"
                     /translation="MSINDPLGDMLTRIRNAQMRRKSSVSTPGSRLRANVLDVLKSEG
                     YIRDYSTTEFGNGRTEFSIELKYYDGQPVIRSIERVSKPGRRVYASVDTMPRVADGLG
                     VTIVSTPQGVMADHEARERNVGGEVLCKIF"
BASE COUNT          794 a         1194 c         1274 g          540 t
ORIGIN      
        1 catcggcaag aagggcgccg atatcgagaa gctgcgcaag ctggtcgcca gcatgaccaa
       61 tgccgacgtg accatcaaca tcgtcgaggt gcgcaagccg gagatcgact ccacgctggt
      121 cgccgagtcg atcgcccagc agctcgagcg ccgcgtcgcg ttccgccgcg ccatgaagcg
      181 cgccgtgcag tcggcgatgc gcctcggggc cgagggcatc cgcatcaact gctcgggccg
      241 cctcggcggg gccgagatcg cccgcatgga atggtaccgc gagggccgcg tgccgctgca
      301 cacgctgcgc gccgacgtcg attacggcac ggccacggcg ttcaccacct atggcacgtg
      361 cggcatcaag gtctggatcg tcaagggcga gatcctcgag cacgagccga tggcgcagga
      421 caagcgcctt aatgaggaag gcgcccgctc gggcggccgc cgcgagcgcg agcacgcggc
      481 gtaaccacga gagggcacga agaggttcgc catgctgcaa ccaaagaaga ccaagttccg
      541 caagcagttc aagggccgca ttcacggcct ggcgaagggc ggcacggagc tcaatttcgg
      601 ccagttcggc ctcaaggcga tggagccgga gcgggtcaat gcgcgccaga tcgaggccgc
      661 ccgccgcgcc atcacgcgcg agatgaagcg tcagggccgc gtctggatcc gcatcttccc
      721 ggacgtgccg gtgacgcaga agccgaccga agtgcgcatg ggctccggca agggttcgcc
      781 cgaatactgg gcggcgcgcg tcaagccggg ccgcatcatg ttcgagatcg atggcgtgcc
      841 ggaggcggtc gcccgcgagg ccctgcgcct cggtgccgcc aagctcccca tcaagacgcg
      901 cttcatccag cgcatcgcgg agtgaggatc atgaagtcga ctcagagact gtccgatctc
      961 aaagccatga cgccggatca gctgcaggac gagctgctgt cgctcaagaa ggagcagttc
     1021 aacctgcgct tccagcgcgc caccggccag ctcgagaata cgtcgcgggt gcgtcaggtc
     1081 cgcaaggaca tcgcgcgcgt gcgcacgctg cagcagcaga agctcgctac ggcgaaaggt
     1141 taaggagaca aagatgccga agcgcgtttt gcagggcgtc gtggtcagcg acaagcagga
     1201 caagactgtc gtcgtgaaag tcgagcgacg tttcacgcat ccggtcatga agaagaccgt
     1261 gcggcgttcg aagaactacc acgctcacga tgagaataat tcagccaaga ccggggacac
     1321 ggttttcatc caggaatccc gtccctattc caagctgaag acatgggaac tcgtatccga
     1381 cgccgcgggc ggcactgccg agcagggctc cggggtgatc agcaaggtca agtcgctgat
     1441 cggattgaag ggttgagagc gagaggcggc cgctcgaggt cgccgctcgg gtcacgaagg
     1501 gcaggggacg tgagatcccc gtcagccgta gtccggcggg agccggaaac cggtctgaaa
     1561 caggagaagg atcaaggcca tgatccaggt acaaaccaac ctcgacgtcg ccgataattc
     1621 cggcgcgcgc cgcgtcatgt gcatcaaggt gctgggcggc tcgaagcgca aatacgcgac
     1681 cgtcggcgac atcatcgtcg tgtccgtgaa ggaggcgatc ccgcgtggtc gcgtcaagaa
     1741 gggcgacgtg atgaaggcgg tcgtcgtgcg caccgccaag gacgtgcgcc gggccgacgg
     1801 ctcggtcatc cgcttcgaca agaacgcggc ggtgctgatc aacaaccaga aggaaccggt
     1861 cgggacgcgc atcttcggcc cggttccgcg cgagctgcgc gccaagaacc acatgaagat
     1921 catctcgctt gcgccggagg tgctgtgatg gccgccaaga tcaagaaggg cgacaaggtc
     1981 gtcgtcctga ccggtcgcga caagggccgc accggcgaag tcgtgcaggt gatgccgaag
     2041 gaagcgcgtg cgctggtgcg cggcgtcaac ctcgtcaagc gtcatcaacg ccagaccatg
     2101 aaccaggagg gcggcatcat ccagaaggag gcgccgatcc atctctccaa tctggcgctc
     2161 gcagacccga aggatggcaa gccgacgcgg gtcggattca aggttctgga tgacggacgc
     2221 aaggtgcgcg tcgccaagcg ttcgggagat ctgatcgatg cctgaagctg aagacaagaa
     2281 ggccgccaag ggcggcgcca agaagggtgc cgacaagggc gccgctcgcc cggccaaggc
     2341 cgacggcgag acccccgcga agcccgccaa ggcggcgaag gcgcccaagg ccgacaaggc
     2401 cgaggctgct tcgcgccgag acgcgccgcc cgccgccccg atcaacgtcg acggctacac
     2461 gccccgcctc aagaagcatt acgaggaggt cgtgcggcag aagctgatcg aggagttcgg
     2521 ctacgcgaac cccctgcagg tgccggcgat cgagaagatc gtgctcaaca tgggcgtcgg
     2581 cgagtcgacg agcgattcga agaaggcgtc ggtcgcagcg gctgacctcg ccctgatcgc
     2641 cggccaaaag gccgtcgtga cccgggcccg caaggcaatc tcgaccttca aggtccgcga
     2701 gaacatgccg atcggttgca aggtcacgct gcgcaagacg cgcatgtacg agttcctcga
     2761 ccggctcgtg aacatcgcgc tgccgcgcgt gcgcgacttc cgcggcctga acccgaagtc
     2821 gttcgacggg cgcggcaact acgccctcgg gatcaaggag cacatcgtgt ttccggagat
     2881 caactacgac aaggcggaag cgatctgggg catggacgtc atcatcacca ccacggcgaa
     2941 gaccgacgaa gaggcccggg cgctcctgaa acacttcaac ttcccgttcc ggcagtgagg
     3001 ccggctggca tcagcccgac ctcagacgcg gacaccggag agaaccgaca tgtcgaaaaa
     3061 aagctcagtt gagaagaaca atcgccgcaa gcagctggcc aagaaatatg ccggcaagcg
     3121 cgagcggctc cttgccatcg ccaacgacga ggcgcgtccg atggaggagc gtttcgaggc
     3181 gcgcctgaag ctggcggagc tgccgcgcaa cggcaatccg acccgcatcc gcaaccgctg
     3241 cgagatcacc ggccggccgc gcgcctatta ccgcaagctc ggcatgtcgc gcatcgcctt
     3301 gcgcgagctc gggtcgcaag gcctgatccc cggtcttgtg aagtcgagct ggtaaggagg
     3361 cgccgatgtc gatcaatgat cctttgggcg atatgctcac gcgcatccgc aacgctcaga
     3421 tgcgtcgcaa gagctccgtt tcgacgccgg gctcgcgcct gcgcgccaac gtgctcgatg
     3481 tcctgaagtc ggaaggctac attcgcgact actcgacgac cgagttcggc aatggccgca
     3541 ccgagttctc gatcgagctc aagtattacg acggccagcc ggtgatccgc tcgatcgagc
     3601 gcgtgtcgaa gccgggccgg cgggtctatg cgtccgtcga tacgatgccg cgcgtggccg
     3661 acgggctcgg cgtcacgatc gtgtcgacgc cgcaaggggt gatggccgac cacgaggcgc
     3721 gcgagcgcaa cgtcggcggc gaagtgctct gcaagatctt ctgatcgacg ggcactgaca
     3781 gggaatttga ggagaccgat at
//
LOCUS       DATAIQ010000355         1942 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_387803, whole genome shotgun sequence.
ACCESSION   DATAIQ010000355 DATAIQ010000000
VERSION     DATAIQ010000355.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1942)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1942)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1942
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_387803"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1486)
                     /gene="ffh"
                     /locus_tag="VHN20_06040"
     CDS             complement(<1..1486)
                     /gene="ffh"
                     /locus_tag="VHN20_06040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011155813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0048501 - signal recognition particle,
                     plasma membrane targeting [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005048 - signal sequence binding
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HEX2725361.1"
                     /translation="MFEGLSEKLSGILDKLTRRGALSEEDVNAALREVRRALLEADVA
                     LEVVRSFTDKVRARAVGAEVVKSVTPGQMVVKIVNDELVAMLGADAETIDLNAAPPVA
                     ILMVGLQGSGKTTTTAKIASRLADRAKRRVLMASLDTRRPAAMEQLAVLGRQVGVETL
                     PIMPGQSAVQIARRALEAARLGGFDVVMLDTAGRVTVDEALMAEAADVKAATNPHEVL
                     LVADALTGQDAVNTARAFDQRLGVTGIVLTRMDGDARGGAALSMRAVTGKPIKLVGTG
                     EKIDALEEFHPQRVASRILGMGDIVSLVEKAAESIDQEKALRAVEKMRKGKFDLDDLR
                     DQLAQMEKIGGIGGMLGMLPGIAKMKNQLASANLDDKVIKRQRAIIDSMTAQERRNPD
                     VLKASRKKRIAAGSGTKVEEVNKLLKMHRQMADMMKMMGGAKGRGLGQALGNMFGMGD
                     IVSLVEKAAENIDQEKALRAVERMRKGKFDLDDLRDQLAQMEKIG"
     gene            complement(1490..1705)
                     /locus_tag="VHN20_06045"
     CDS             complement(1490..1705)
                     /locus_tag="VHN20_06045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase"
                     /protein_id="HEX2725362.1"
                     /translation="MSDDTLRIEDAVNETCPWSGKPIAADSLTVYRGVVVGFCNPGCR
                     DKFAAAVTQFEKALAERETPLLAKGLD"
BASE COUNT          272 a          677 c          641 g          352 t
ORIGIN      
        1 cgccgatctt ttccatctgg gcgagctggt cgcgcaggtc gtcgagatcg aacttgccct
       61 tgcgcatgcg ctcgacggcg cgcagggcct tctcctggtc gatattctcg gccgccttct
      121 cgaccagcga gacgatgtcg cccatgccga acatgttgcc cagggcctga ccgaggccgc
      181 ggcccttggc cccgcccatc atcttcatca tgtcggccat ctgccgatgc atcttgagga
      241 gcttgttgac ctcctcgacc ttggtgcccg agccggcggc gatgcgcttc ttgcgcgacg
      301 ccttgaggac atcggggttg cggcgctcct gcgccgtcat cgaatcgatg atggcgcgct
      361 ggcgcttgat caccttgtcg tcgagattgg cgctggcgag ctggttcttc atcttggcga
      421 tgccgggcag catgccgagc atgccgccga tgccgccgat cttttccatc tgggcgagct
      481 ggtcgcgcag gtcgtcgaga tcgaacttgc ccttgcgcat cttctcgacg gcacgcaggg
      541 ccttttcctg gtcgatgctt tccgccgcct tctcgacgag cgagacgatg tcgcccatgc
      601 cgaggatgcg gctggcgaca cgctgcgggt ggaactcctc gagcgcgtcg atcttctcgc
      661 cggtgccgac gagcttgatc ggcttgcccg tgacggcgcg catcgacagg gcggcgccgc
      721 cgcgggcatc gccgtccatg cgcgtgagca cgatgccggt gacgccgagc cgctggtcga
      781 aggcgcgcgc cgtgttgacg gcatcctggc ccgtaagcgc gtcggcgacg agcagcacct
      841 cgtgcgggtt cgtggccgcc ttgacgtcgg cggcttccgc catcagcgcc tcgtcgaccg
      901 tgacgcggcc ggcggtgtcg agcatcacca cgtcgaagcc gccgaggcgc gcggcctcga
      961 gcgcgcggcg cgcgatctgc accgcggact gccccggcat gatcggcagc gtctcgacgc
     1021 cgacctgccg gccgagcacc gcgagttgct ccatggcggc cgggcggcgc gtgtcgagcg
     1081 aggccatcag cacacgccgc ttggcgcggt ctgcgaggcg gctggcgatc ttggccgtgg
     1141 tggtcgtctt gcccgagccc tgcaggccga ccatcaggat ggcgaccggc ggtgccgcat
     1201 tgaggtcgat cgtttccgcg tccgcgccga gcatcgccac gagttcgtca ttgacgatct
     1261 tgacgaccat ctggccgggg gtgactgact tgaccacctc ggcgccgacc gcgcgggcgc
     1321 gcaccttgtc ggtgaacgag cgcaccacct cgagcgccac gtccgcctcg agcagcgcgc
     1381 gtcgcacctc gcgcagggcc gcgttgacat cctcctcgct cagcgcgccg cgccgcgtga
     1441 gcttgtcgag gatgcccgag agtttttccg aaagtccttc gaacatgggc taatcgagac
     1501 ccttggcgag aagcggcgtc tcgcgttcgg cgagagcctt ctcgaattgc gtcacggccg
     1561 ccgcgaactt gtcgcggcag cccgggttgc agaagccgac cacgacgccg cgatagacgg
     1621 tcagcgaatc cgccgcgatc ggctttcccg accacgggca ggtctcgttg accgcgtcct
     1681 cgatgcgcag cgtgtcgtcg gacatcccaa tcccttccgt ctgtcatcac cgggcttgtc
     1741 ccggtgatcc cgatggcgaa gactacatgc tcttcgtagc gggatggccg gcacaaggcc
     1801 ggccatgaca tggtgaccca catgcccaaa gccaaacgcg cccgagggcg catccgcgct
     1861 gtcgggcgtt gacctccggc cgaagccccg aagggcccct gaaccggtcg gcggctcaca
     1921 aggctcgctc gtcacgattt cc
//
LOCUS       DATAIQ010000356         8022 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_18947, whole genome shotgun sequence.
ACCESSION   DATAIQ010000356 DATAIQ010000000
VERSION     DATAIQ010000356.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 8022)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8022)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8022
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18947"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1116)
                     /locus_tag="VHN20_06050"
     CDS             complement(<1..1116)
                     /locus_tag="VHN20_06050"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX2725363.1"
                     /translation="MSERQRTPWPIVALLLGAGLFAACQVGKAAIAVPALRRGLDLTL
                     AEASWVVGLYGALGAAGGLVAGALVTRLGTRMALLGGLALIALGSAAGAFATGLASLL
                     ITRALEGCGFLAVAIAAPAILDRVAAPADRHVAFALWGAYMPLGTALMMMAGPFLLAF
                     GWRGLWAVSGAAVLLYAIVLHMILPRAASGPARRPGEPLLPRVWHVLRAPGPLLLALG
                     FGFYTSQYFALTALFPTLLVERMGLSIGAAGLVSALVVLANALGNLAAGALVRLGAPL
                     WATIAGGFASVALLSFGVFSDLPTALVCACAAASLALSGTIPASIFAALPRLAPAPFL
                     VPVAFGLVMQASNVGQLVGPVALAPWVEAFTWSSAPIL"
     gene            complement(1172..1423)
                     /locus_tag="VHN20_06055"
     CDS             complement(1172..1423)
                     /locus_tag="VHN20_06055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725364.1"
                     /translation="MPLIRVEAVQDPHSGNYYVQIFHPADADEPLVTTAPRYRSAAAA
                     ETDTIAILAAAANSAQGDNASPQGKDSGARKSDVPGTRK"
     gene            1741..1947
                     /locus_tag="VHN20_06060"
     CDS             1741..1947
                     /locus_tag="VHN20_06060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725365.1"
                     /translation="MPAAVKLPQAFNLMLLKTNSSRHVLLKWRNGDFAGVAFVLPEDT
                     GLAKAARPPAAPPAGDVQPRASGS"
     gene            2166..3035
                     /gene="cpaB"
                     /locus_tag="VHN20_06065"
     CDS             2166..3035
                     /gene="cpaB"
                     /locus_tag="VHN20_06065"
                     /inference="COORDINATES: protein motif:HMM:TIGR03177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Flp pilus assembly protein CpaB"
                     /protein_id="HEX2725366.1"
                     /translation="MRSKTLIMIGLALVFGVAAIFAGQKWLERQSSRLRPVEVAAPKP
                     VATVKVVVAAAPLRFGTEVTRQHLREVAWPEGAVPKGAFTAIDDLLDGKTRRTALTAV
                     EENEPLLMTKVTGPGQRASLAAVIDPGMKAITVRVNDVNGVAGFVLPGERVDVLLTRN
                     TDKDDAWSDVLLQNVKVLAADQSADERSDKPSVVKTVTFEVSTSQAQKLTLAASIGSL
                     SLALRAAGTADVEATQRVNVSNLSHGETTVARERRTTTVNVVRALKRQDYSVPVQPQT
                     APTEAAAKVNPTF"
     gene            3058..4593
                     /locus_tag="VHN20_06070"
     CDS             3058..4593
                     /locus_tag="VHN20_06070"
                     /inference="COORDINATES: protein motif:HMM:NF024792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TadE family protein"
                     /protein_id="HEX2725367.1"
                     /translation="MQPIDRLRRLGDRLLRDTRGAISMPLALAMPVLFGFGMLVIDGS
                     RYYSLQTSLQAGADALALAGAAELDGRDDAITRANRAIDNLVANDQRFGEGTSAISRG
                     GIAVRYLGSLPATDAEAITAAHVTTDPSRAGFVEVRVQPVTMRNLFAAAAGAVGTTAQ
                     TAAAAVAGFDSVACDIAPLFICNPFEGTGTSVWHGAKDPGFRRRLIAMKEKGADYFPA
                     NRGYLKSPSGKSSGSELKEALAIDHPRECYRSSKVELRPGTVSSTAEAMNVRFDLYEG
                     AFKKYGSDPDYRPAVNVRKGYTGAGCGQTAAYDPTLSPTDPANQDKPLGFPRDPCFYT
                     DSCTYGGASMGGRIGGGDWDFETYWKASHPGRSFPNGWKNTDENRPSRYEVYRYEIDN
                     DLVGDLSVGGGGGGKKGGGGGAQESGTPQCYSGDKTKLTDNPDRRTFVAAILDCVSLG
                     QQYDIKGGSSPPLPVTTFARFFLTEAVDKKEGTFMVELVELVEPGTAAARNVIRDSVQ
                     LVR"
     gene            4649..6091
                     /locus_tag="VHN20_06075"
     CDS             4649..6091
                     /locus_tag="VHN20_06075"
                     /inference="COORDINATES: protein motif:HMM:NF024792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TadE family protein"
                     /protein_id="HEX2725368.1"
                     /translation="MRATRGAIAMPLALLLPVLFGVSLLVIDGGRYFSLQSSLQAGAD
                     ALALAAAAELDARPDSITRANRAIDNLVANDQRFGDGATPISRDRVSVRFLRSLPARD
                     ADAIADANVTTDPLRAGFVEVRVQPVTMRNLFATVAGFAGTTTRTAAAAIAGFDSVAC
                     NVAPLFMCNPAEESPVNLSLLSRQPSFKRRLIAMRDKSNQPGSGNYGFLVPAEGGSGA
                     SSVSNALSVDRPPGCYGKTGVEVRPGYIAATADALNVRFDIYQGGFKTSKGDPNFRPA
                     VNVRKGFTGSGCNMSATADHIFPRDPCYATNSCNDFPVTNGSVGGGDWDFEGYWTRTF
                     PGKPFPVDPDTGETWSNANRPSRYQVYRHEISANLMTTPSGAGSLGAPGETGAPQCYT
                     GDKEALKTDPVDRRVFVGAILDCKAYADQMKGSSGGKIPVTSYGKFFLTEPMDKNDAR
                     GTVWVEMIELVEPGTAAARNIIRDTVQLVR"
     gene            6103..6591
                     /locus_tag="VHN20_06080"
     CDS             6103..6591
                     /locus_tag="VHN20_06080"
                     /inference="COORDINATES: protein motif:HMM:NF019428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TadE/TadG family type IV pilus assembly protein"
                     /protein_id="HEX2725369.1"
                     /translation="MSRLRNLLRLRHDDKGAAAIEAALTFPFVVLLASGLFEFGSLFY
                     NYEMIQTGVRDAARYLARVGDLPASESAARNLAVRGTVDAGAPLRVSWWSAADVQIIY
                     KSTPNPVDPNTGLRLYRGGDPLTVIRVSTDLDYNALGLFNALGLGPVRVTAAHEERYV
                     GQ"
     gene            6578..7207
                     /locus_tag="VHN20_06085"
     CDS             6578..7207
                     /locus_tag="VHN20_06085"
                     /inference="COORDINATES: protein motif:HMM:NF019428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TadE/TadG family type IV pilus assembly protein"
                     /protein_id="HEX2725370.1"
                     /translation="MSVSNILRRMLSPYRDESGAVAVEFGLIGGIFIVLLLAMIDLGH
                     AFWQFNQATKALQLGVRLAAVSNPVSSDLKTMTGISGTVEEGDPMPYFKRVCSGATQR
                     CDGGTYDAAAMRTIVYGRGNAACPTTPQAYPAMCQIFPRIQPQNLVVEYTQTGLGFAG
                     RPGGPVPTITVRLTGLSFNFAVLNGLLGFPAIPMARLTATVSGEDLSGQ"
     gene            complement(7413..>8022)
                     /locus_tag="VHN20_06090"
     CDS             complement(7413..>8022)
                     /locus_tag="VHN20_06090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX2725371.1"
                     /translation="LALARRHGLWIIAAEIYARFVYDPTVAVGERAASFKDVMSDDDA
                     VLFVQTFSKNWAMTGWRVGWLEAPARLGPTIENLIQYSTSGVPVFLQRAAIAAVDRGE
                     SFAAHQIARARHGRDIICDGLMATGRVEIPPPAGAFYAFLRIPGVADSRALTLRLIDD
                     ANVGLAPGTAFGAGGEDYLRLCFARKAEDLEEAVGRLARALT"
BASE COUNT         1360 a         2808 c         2680 g         1174 t
ORIGIN      
        1 caggatgggc gcgctcgacc aggtgaacgc ctccacccag ggagccaacg cgacggggcc
       61 gacaagctgc ccgacattgc tcgcctgcat cacgagcccg aaggcgacgg ggacgaggaa
      121 aggggccggc gcgaggcgcg gcagtgccgc gaagattgag gcagggatgg tcccgctgag
      181 cgccagcgat gcagccgcac aggcgcagac gagcgcggtc ggcaggtccg aaaagacccc
      241 gaacgagagc agcgcgaccg acgcgaagcc gccggcgatc gtcgcccaaa gcggcgcccc
      301 gagccgcacc agcgcgcccg ccgccaggtt gccgagcgcg ttggcgagca cgaccagcgc
      361 gctcaccagc ccggcggctc cgatcgagag gcccatgcgc tcgacgagca gcgtcgggaa
      421 cagcgccgtg agcgcaaaat actgcgacgt gtagaacccg aagccgagcg cgagcagcag
      481 cggcccgggg gcgcgcagca cgtgccacac cctcggcagc agcggctcgc cgggccgccg
      541 cgcgggcccc gaagccgcgc gcgggaggat catgtgcagc acgatcgcat agagcagcac
      601 cgcggcgccg ctcacggccc acaggccgcg ccatccaaac gccaggagga acgggccggc
      661 catcatcatc agcgcggtgc cgagaggcat gtacgcgccc caaagggcga aggccacgtg
      721 gcggtcggcc ggcgccgcga cccggtcgag gatggcaggc gcggcgatcg ccactgcaag
      781 gaagccgcat ccctcgagcg cccgggtgat cagcagcgag gcgaggccgg tcgcgaacgc
      841 ccccgccgca ctgccgagcg cgatcagcgc caagccgccg agcagcgcca ttctggtgcc
      901 gaggcgcgtg accagcgcgc ctgccacgag cccgccggca gcgccgagcg cgccatacag
      961 gccgacgacc caggacgcct cggcgagcgt gaggtccagc ccgcgccgca acgcgggcac
     1021 ggcaatcgcc gccttgccga cctggcaggc ggcgaacagg ccggcgccga gcagaagggc
     1081 gacgatcggc cacggcgtgc gttgccgctc gctcatcgcc ggaccgtcat gcgcaatcgc
     1141 ggaagaagga cgcctgccga ggtccacacg tctatttgcg cgtgccgggg acgtcggact
     1201 tgcgagcacc gctgtccttg ccttgcggcg aagcattgtc gccttgcgcg ctgttggcgg
     1261 cggccgccag gatggcgatc gtgtcggtct cggccgcggc ggccgagcga tagcgcggcg
     1321 ccgtcgtgac cagcggctcg tccgcatccg ccggatggaa gatctgcacg tagtagttac
     1381 cggaatgcgg atcctgcacg gcttcgacac ggatcagcgg catcgatctc tccatgactt
     1441 tcggcaaagt ggaattcagt tcgcaggatc atgctgtagt tgggctgccg cggccggtcc
     1501 agcgttgcgg gcgtaggcgc atcggcgggc aaccggccca tcggggcaac cgtgatgcgg
     1561 cgcgccccgc ccggctaagc gaaagtgctt cgtatacttg tgcgggccac gaatcgctgg
     1621 acggttcacc atggctcagc cggtttcctg gggcaaacgg cgcgccccac gtcaaagggt
     1681 cttcggctcg aggtcaattg cgtcatccgc gacctgtcga caaccggcgc gaagcacgag
     1741 gtgccggccg cggtcaagtt gccccaggcc ttcaacctga tgctcctcaa gaccaactcg
     1801 tcacgacacg tcctgctgaa atggcgcaac ggcgacttcg ctggcgtggc gttcgtcctg
     1861 ccggaggaca ccgggcttgc gaaggctgcc aggcctccgg ccgctccgcc ggccggtgac
     1921 gtgcagccgc gagcgtccgg ttcctgatcc tcgccggcgc cgcgacgatc gcctggcgat
     1981 gcacggcgtt ccgggaattc gccccaccag gcaaccgcgg agacggcttt tacatttcgc
     2041 taagcacgat cgcgccaagt ctccgtcccg ggggcgttcg atacagttaa gcctctgttg
     2101 tttacgtcca attcatcgga aaggcgtgtc ctgaggggta cgaaacccgc atcaggattc
     2161 cggccgtgcg ctcaaaaacc cttatcatga tcggcctcgc gctcgtgttt ggcgtcgcgg
     2221 cgatattcgc cggccagaag tggctcgagc gccagtcgag ccgcttgcgc cccgtcgagg
     2281 tggcagcgcc gaagccggtc gcgaccgtga aggtcgtggt cgcggcggcg ccgctgcgct
     2341 tcggaaccga ggtgacccgc cagcatctgc gcgaggtcgc ttggcccgaa ggcgcggttc
     2401 cgaagggcgc gttcaccgcg atcgacgacc ttctcgacgg caagacgcga cgcaccgcgc
     2461 tgaccgcggt cgaggagaac gagccgcttc tcatgaccaa ggtcacaggg ccggggcagc
     2521 gcgcatctct ggccgcggtc atcgatcccg gcatgaaggc gatcaccgtg cgcgtcaacg
     2581 acgtgaatgg cgtggccggt ttcgtgctgc cgggcgagcg cgtcgatgtc ctgcttacac
     2641 gcaacaccga caaggacgac gcgtggtctg acgttctgtt gcagaacgtc aaggtcctgg
     2701 ccgcggacca gagcgccgac gagcgctccg acaagccctc ggtggtcaag accgtgacct
     2761 tcgaggtgtc cacgagccag gcgcagaagc tcacgctcgc ggcgagcatc ggctcgctgt
     2821 cgctggccct gcgtgcggcc gggaccgcgg acgtcgaggc gacgcagcgc gtcaacgtct
     2881 ccaatctttc gcacggtgaa accaccgtgg ctcgcgagcg gcgcacgacc accgtgaacg
     2941 tcgtccgggc gctgaagagg caggactata gcgtgccggt gcagccgcag acggccccga
     3001 ccgaagcggc cgcgaaggtc aacccgacct tctgaggcca gcagcgggcg cgcgccgatg
     3061 caaccaatcg atcgtctccg tcgcctcggc gatcggctgc tgcgcgacac gcgcggcgcg
     3121 atctcgatgc cgctcgcact cgcgatgccg gtgctgttcg gcttcggcat gctggtcatc
     3181 gacggcagcc gctactacag cctgcagact tcgctgcagg ccggagccga cgcgctggcg
     3241 ctggcgggcg cggcggagct cgacgggcgc gacgatgcga tcacccgcgc caaccgcgcc
     3301 atcgacaatc tcgtcgccaa cgaccagcgc ttcggcgaag gcacatcggc gatctcgcgc
     3361 ggcgggatcg ccgttcgcta cctcggctcg ctgccggcga ccgacgccga agcgatcacg
     3421 gccgcgcatg tgacgaccga cccgtcgcgg gccgggttcg ttgaagtcag ggtgcagccg
     3481 gtgacgatgc gcaacctgtt cgctgcggcg gcgggcgctg tcggcaccac cgcgcagacc
     3541 gccgcggcgg cagtcgcggg cttcgacagc gtggcctgcg atatcgcccc gctgttcata
     3601 tgcaatccgt tcgaaggcac cggcacgagc gtctggcacg gcgccaagga cccgggcttc
     3661 cgacgccggc tcatcgcgat gaaggaaaag ggggcggatt acttcccggc caaccgcggt
     3721 tatctcaagt cgccgtccgg caagagcagc ggcagcgagc tcaaggaagc gctcgccatc
     3781 gaccacccgc gcgaatgcta caggagcagc aaggtcgagc tgcgccccgg caccgtgtcg
     3841 tccaccgcgg aagcgatgaa cgtgcgtttc gacctctatg aaggcgcctt caagaaatac
     3901 ggcagcgatc ccgactacag gccggcggtg aacgtgcgca agggctacac cggcgcgggc
     3961 tgcggccaga ccgccgccta tgacccgacc ctgtccccca ccgatcccgc caaccaggac
     4021 aagcccctcg gcttcccgcg cgacccgtgc ttctacaccg acagctgcac ctatggcgga
     4081 gccagcatgg gcggccgcat cggcggcggc gactgggatt tcgagacgta ttggaaggcc
     4141 agccatcccg gccggtcctt cccgaacggc tggaaaaaca cggacgagaa tcgaccctcg
     4201 cgctacgagg tctaccgcta cgaaatcgac aacgatctcg tcggcgacct gtcggtcggg
     4261 ggcggcggcg gcggcaagaa gggcggcggt ggcggcgccc aggagagcgg cacgccgcag
     4321 tgctacagcg gcgacaagac gaagctgacg gacaatcccg accgccgcac cttcgtggcg
     4381 gcgatcctcg actgtgtctc gctcggccag caatacgaca tcaaaggcgg cagctcaccg
     4441 ccgctgcccg tgaccacctt cgcgcgcttc ttcctgaccg aagcggtcga caagaaggaa
     4501 ggcaccttca tggtcgagct cgtcgagctc gtcgagccgg gcaccgcggc ggcgcgcaac
     4561 gtcatccgcg actcggttca gctggtgcgg tgacgtcatg ccgagaaaac gcatcatccc
     4621 ttgtctgcgc cgggaggcgg atcggctgtt gcgcgcgacg cgcggcgcga tcgccatgcc
     4681 gctggcgctg ctcctgccgg tcctcttcgg tgtcagcctg ctcgtcatcg acggcggccg
     4741 ctacttcagc ctccagagct cgcttcaggc gggagccgac gcgctcgcgc tcgccgcggc
     4801 cgccgagctc gatgcgcgcc cggattcgat cacgcgtgcc aaccgcgcca tcgacaacct
     4861 cgttgccaac gatcagcgct tcggagacgg cgcgacgccg atctcgcgcg accgggtcag
     4921 cgtgcgcttc ctcagatcgc tgccggccag ggacgcagac gcgatcgccg atgccaacgt
     4981 cacgaccgat cccttgagag cgggctttgt cgaggtgcgc gtgcaacccg tcacaatgcg
     5041 caatctgttc gcgacggttg ccggcttcgc cggcaccacg acgcgcacgg cggccgctgc
     5101 catcgccggc ttcgacagcg tcgcctgcaa cgtggcgcct ctgttcatgt gcaatccggc
     5161 cgaagaatcg cccgtcaatc tcagcctcct ctcccggcag ccgagcttca agcggcgcct
     5221 gatcgccatg cgcgacaaga gcaaccagcc cggatcgggc aattacggat tcctggtccc
     5281 ggccgaaggg ggcagcggcg ccagcagcgt cagcaacgcg ctttcggtcg accgcccgcc
     5341 cggctgctac ggcaagaccg gcgtcgaggt gcggccgggc tacatcgcgg cgaccgccga
     5401 cgccctcaac gtgcgtttcg acatttacca gggcggcttc aagacgagca aaggcgatcc
     5461 gaacttccgg ccggcggtca acgtgcgcaa aggctttacg gggtccggct gcaacatgag
     5521 cgcaacggcc gatcacatct tcccgcgcga cccgtgctac gcgaccaact cgtgcaacga
     5581 ttttccggtc accaacggct cggtcggcgg cggcgactgg gacttcgaag gatactggac
     5641 gcgtaccttc cccggaaagc cgttcccggt cgatcccgac accggcgaga cgtggtcgaa
     5701 cgccaaccgg ccgtcgcgct atcaggtcta ccgccacgag atcagcgcca acctgatgac
     5761 cactccgtcg ggcgccggca gcctcggcgc gcccggcgaa accggcgcgc cgcaatgcta
     5821 taccggcgac aaggaggctc tcaagaccga tcccgtcgac cggcgtgtct tcgtcggcgc
     5881 catcctcgac tgcaaggcct acgccgacca gatgaagggc agctccggcg gcaagatccc
     5941 ggtgacctcc tacggcaagt tcttcctgac cgagcccatg gacaagaacg acgccagggg
     6001 aaccgtgtgg gtcgagatga tcgagctggt cgagccgggc actgcagccg cgcgcaacat
     6061 catccgcgac acggttcagc tcgtgcggtg aggagcctgg ccatgtcccg tctgcgcaac
     6121 ctgcttcgcc tcaggcatga cgacaaggga gccgccgcca tcgaggctgc gctcaccttc
     6181 ccgttcgtcg tgctgctggc ctcggggctc ttcgagttcg gaagcctgtt ctacaattac
     6241 gagatgatcc agaccggcgt ccgcgatgcg gcgcgctacc ttgcgcgcgt cggcgatctt
     6301 ccggcctcgg aatccgcggc gcgcaacctc gcggtgcggg gcaccgtcga tgccggcgcg
     6361 ccgctgcgcg tcagctggtg gagcgccgcc gacgttcaga tcatctacaa gagcactccg
     6421 aatcccgtcg atccgaacac gggcctgcgc ctctaccgtg gcggcgatcc gctcacggta
     6481 atccgggtga gcacggacct cgactacaac gcccttggcc tcttcaacgc gctcggcctc
     6541 ggcccggtcc gcgtcaccgc cgctcatgag gaacgttatg tcggtcagta acatcctgag
     6601 gcgcatgctg tcgccgtacc gcgacgagag cggcgccgtc gcggtcgagt tcggcctcat
     6661 cggcggcatc ttcatcgtgc tgctgttggc catgatcgat ctcggccacg ccttctggca
     6721 gttcaaccag gcgaccaagg ccctgcagct cggcgtgcgg ctggcggcgg tctcgaatcc
     6781 ggtctcgtcg gacctcaaga ccatgactgg aatttccggc acggtcgagg aaggcgaccc
     6841 gatgccgtat ttcaagcggg tctgcagcgg cgctacgcaa aggtgcgatg gcggcaccta
     6901 tgacgcggcg gcgatgcgca cgatcgttta cggccgcggc aacgccgcct gtcccaccac
     6961 gccgcaagcc tacccggcga tgtgccagat cttcccgcgc atccagccgc agaacctggt
     7021 ggtcgaatat acgcagacgg ggcttggctt cgccgggcgc ccgggcggcc cggttccgac
     7081 catcaccgtc cggctcacgg gcctcagctt caatttcgcg gtcctcaacg ggctgctcgg
     7141 gtttcccgcc atcccgatgg cccgcctcac cgccaccgtc agcggcgagg acctttcggg
     7201 gcaataagct tcttccttct cgcttggatc gcgggtgttc gagctccaat ctctgaggcc
     7261 taactttcgt gggagaaggt gtcaccccgg gtcttgactt cggcaggccc gaggacaggc
     7321 tccggcgacg gatgagggag tgccctctcc cgatagggct cccctcaccg ggccgctgcc
     7381 gcggactcga cgtctccctt cgcgagcggt tgctaggtga gcgcgcgggc aaggcggccg
     7441 acggcttcct ccagatcctc cgccttgcgc gcgaaacaca ggcgcaggta gtcctcgccg
     7501 ccggccccga aggcggtgcc gggcgcgagg ccgacattgg cgtcgtcgat cagccgcagg
     7561 gtcagcgccc gcgaatcggc cacccccggg attctcagaa aggcatagaa cgcgccggcc
     7621 ggcggcggaa tctcgacccg gccggtggcc atcagaccgt cgcagatgat gtcgcggccg
     7681 tggcgcgccc gggcgatctg atgggcggcg aagctctcgc cgcggtcgac ggcggcgatg
     7741 gcggcgcgct gcaggaacac cggcacgccg gaggtcgaat actggatgag gttctcgatg
     7801 gtggggccga gcctggccgg cgcttcgagc cagccgacgc gccagccggt catcgcccaa
     7861 ttcttggaaa aggtctgcac gaacagaacc gcgtcgtcgt cgctcatcac gtccttgaac
     7921 gacgccgccc gctcgccgac cgcaaccgtc ggatcgtaga cgaagcgcgc gtagatctcg
     7981 gcggcgatga tccacaggcc gtggcggcgg gcgagcgcaa gg
//
LOCUS       DATAIQ010000357         2528 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_331490, whole genome shotgun sequence.
ACCESSION   DATAIQ010000357 DATAIQ010000000
VERSION     DATAIQ010000357.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2528)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2528)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2528
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_331490"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..259
                     /locus_tag="VHN20_06095"
     CDS             <1..259
                     /locus_tag="VHN20_06095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012457067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HEX2725372.1"
                     /translation="YCGRPTPSNELTLDHVVPRSRSGETSWENLVACCHTCNNRKGSR
                     TPEEAGMRLARAPRPFSLHTSRHLMRLLGKSDDQWRKYLFY"
     gene            complement(266..2059)
                     /locus_tag="VHN20_06100"
     CDS             complement(266..2059)
                     /locus_tag="VHN20_06100"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HEX2725373.1"
                     /translation="MPVVIQCQDISKTYGARPLFQSLSLSVSDGERIGIVGPNGAGKS
                     TLLRILSGAEPPDSGEVSVRKLARVRYVPQEPEFPPGLTVRGVLESALGEARLSDGDG
                     ETRIHLALGRAGFTGFDAAASELSGGRRKRLAIARELVHAPDVLLLDEPTNHLDIEGI
                     AWLERLLADAAFACVAVSHDRYFLENVATDMVEIDRRYPEGAFRVRGAYSEFLLKREE
                     YLSAASKRQESLENKVRREVEWLRRGPKARTGKSRARIDSANQLIGELAAASERSARA
                     SAQIDFTASERKTKRLIGAVGVAKSLGGRSLFRDVTFSLGPGARLGLVGPNGSGKTTL
                     LRLLAGELQPDAGEIERADGLRVVYFDQHREQLDTSVSLKTALCPHGDSVIYRDRPIH
                     VAGWARRFLFRVEQLEMPVSRLSGGERARVLIARLMLQPADVLLLDEPTNDLDIPTLE
                     VLEDSLLEFPGAIALVTHDRHMLDRVANVVLGIDGEGESALVADYAQWEQARQESRTR
                     EVRAAAPPPAASAPARKRLSYLEQREWDGIEVRIEEADRALAAAHSQLHDPETMRDPR
                     RLQEAYAAVEAAQAAADALYARWAELDAKVT"
     gene            2235..2438
                     /locus_tag="VHN20_06105"
     CDS             2235..2438
                     /locus_tag="VHN20_06105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015478234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HEX2725374.1"
                     /translation="MKETGVVKWFNAAKGYGFIQRENGEDVFVHFTAIQSTGYRTLDE
                     GARVSFLVKTGPKGLQAEEVAAI"
BASE COUNT          446 a          808 c          842 g          432 t
ORIGIN      
        1 gtattgcggc cgtccgacgc catcgaatga gctgacgctc gaccacgtcg tcccgcggtc
       61 gcggtcgggg gaaacgagct gggagaatct ggtcgcctgc tgccacacct gcaacaaccg
      121 gaagggcagc cgcacgcctg aggaggcagg gatgcgactg gcgcgcgcgc cgcgtccgtt
      181 cagcctccac accagccgtc acctgatgcg cctgctcggc aagagcgacg accagtggcg
      241 taagtatctt ttctattgag gacgcctacg tgaccttggc gtcgagctcg gcccagcggg
      301 cataaagcgc gtcggccgcg gcctgcgccg cctcgaccgc ggcatacgcc tcctgcaggc
      361 ggcgcggatc gcgcatcgtc tccggatcgt gcaactgcga atgcgcggcg gcgagtgccc
      421 ggtccgcttc ctcgatccgc acttcgatcc cgtcccattc gcgctgttcg aggtaggaaa
      481 ggcgcttgcg tgcgggcgcg gacgcagcag gcggcggtgc cgcggcgcgc acttcccgag
      541 tgcggctctc ctgccgtgcc tgctcccact gagcatagtc agcgacgagg gcgctttcgc
      601 cttcgccatc gattccgaga accacattgg caacgcggtc gagcatgtgg cggtcgtgag
      661 tgaccaaggc aatcgcgccg gggaattcga gcagactgtc ttcgagtact tcgagggtgg
      721 ggatgtcgag atcgttcgtc ggttcgtcga gcagcagcac atcggcgggc tggagcatga
      781 ggcgggcgat cagcacgcgc gcgcgctcgc cgccggagag ccgggacacc ggcatctcga
      841 gctgctcgac acggaacagg aagcggcgag cccacccggc gacgtgaatc gggcgatcgc
      901 gataaatgac cgaatcgccg tgcgggcaga gcgccgtttt gaggcttacg gaggtgtcga
      961 gctgctcgcg gtgctggtcg aagtagacga cgcgcagccc gtcggcgcgc tcgatctcac
     1021 cggcgtccgg ctgaagctcg cccgcgagca ggcgaagcag ggtcgttttc ccgctgccat
     1081 tcggtcctac caggccgagc cgcgcacccg gtccgaggct gaaggtgaca tcccggaaca
     1141 agcttcgtcc gccgagcgat ttggcgacgc cgacggctcc gatcagccgc ttggtcttgc
     1201 gctccgatgc agtgaagtcg atctgggcgg acgcccgcgc gctccgctcg ctggcggcgg
     1261 caagctcgcc gatgagctgg ttggccgaat cgatgcgggc gcgcgacttg cctgtcctgg
     1321 ccttcggacc gcggcgtagc cactcaactt cacgccgaac cttgttctcg aggctctcct
     1381 gccgcttcga cgccgccgac aggtactcct cgcgcttcag caggaactcg ctgtaggcgc
     1441 cgcgcacgcg gaatgcgcct tcgggatagc ggcggtcgat ctcgaccatg tccgtcgcaa
     1501 cgttctcgag aaagtagcgg tcgtggctga cggcgacgca agcaaacgcc gcgtcggcga
     1561 ggaggcgttc gagccaggcg atgccttcga tgtcgaggtg attggtgggc tcatcgagca
     1621 gcagcacatc gggcgcgtgg accagttcgc gcgcgatggc gagccgcttg cgccggcctc
     1681 ccgacaactc cgaggccgcg gcatcgaagc cggtgaatcc ggcgcggccg agcgcgagat
     1741 ggatgcgcgt ctcgccgtca ccgtcgctga ggcgcgcctc gccgagagcg ctctcgagga
     1801 caccgcgcac ggtgagtccc ggcgggaact cgggctcctg aggcacgtag cggacgcgcg
     1861 ccagcttgcg caccgagacc tcgccgctat cgggcggctc ggcaccgctc aagatgcgca
     1921 gcagggtact cttccccgcc ccgttcggcc ccacgatacc gatgcgctcg ccgtcggaaa
     1981 cgcttagcga aagagattga aataagggcc gggcgccgta agttttagag atgtcctgac
     2041 attgaatcac gaccggcatg aaatgtttcc gcgagtgggg gcgcagaccc cggggagggg
     2101 acgcaccgtc ccccaatgta acatcccaaa cgatagctaa aggcactccc cctaagcact
     2161 tgcgttgtgg tatcctgccc ttgcgtctcc aaacccaaac aggcgcaagc ttagatcaag
     2221 aaggatatct gtagatgaaa gaaaccggtg tagtgaagtg gttcaacgcg gctaagggct
     2281 acggctttat tcagcgtgag aatggggagg atgtattcgt acatttcacc gccattcaat
     2341 cgacgggcta tcgaacgctg gatgaaggcg caagagtgtc gtttctcgtc aagacaggcc
     2401 cgaaaggcct gcaggcggaa gaggtagctg cgatttaact ctcccttggg ccggcttcgg
     2461 cgccggttcg tcgttcgtaa cctctaaatc atccctgtga gcggccggtc ggccgatcga
     2521 gctgctcc
//
LOCUS       DATAIQ010000358         1930 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_434292, whole genome shotgun sequence.
ACCESSION   DATAIQ010000358 DATAIQ010000000
VERSION     DATAIQ010000358.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1930)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1930)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1930
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_434292"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..288
                     /locus_tag="VHN20_06110"
     CDS             <1..288
                     /locus_tag="VHN20_06110"
                     /inference="COORDINATES: protein motif:HMM:NF015338.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HEX2725375.1"
                     /translation="VLRILDHIERRHPQMPTVIMGDTNEWRVNGPCLQEFDDRFAIAD
                     CGPSFHSRRPVAQLDRIIVDRRFAIAGSGVHASAAAKTASDHLPVWARLTL"
     gene            complement(430..1875)
                     /gene="rpoN"
                     /locus_tag="VHN20_06115"
     CDS             complement(430..1875)
                     /gene="rpoN"
                     /locus_tag="VHN20_06115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012493891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase factor sigma-54"
                     /protein_id="HEX2725376.1"
                     /translation="MALGPGLQLRTAQTLVMSQQLQAAIKLLALSNVELEAAIAEEMA
                     RNPLLEMRPSEGAGEEGVVVREDRETGDEAADPAGADQLGGQGEEALDRDWREDATEL
                     DSGSDLGTGSDEGFDFERVSERESGLAEHLLEQLRGTGGTLGGLAEAIVRELEETGYL
                     ETPLAVIAEELGASLKEAEAALALVQSLDPPGIAARSLEECIALQAKAADRHDPAMAR
                     LIANLDLLAKGRMADLKRICGVDDEDLADMVAELRGYDPKPGCRFAPEDAPAAAEPDV
                     LVRQTKSGWSVELNPATLPRVLVNRRYHTELKRSASDKASRAWLSERLASAGWLVRAL
                     DQRAQTVTKVAAEIVKRQQAFFERGVAALRPLTLREVAEAIGMHESTVSRVTQNKTLL
                     CERGLIELKYFFGSGVASDSGEGAAAPAVKAEIRRLIEGETEILSDDAIAGLLKAKGF
                     DIARRTVVKYREAMGIGSSVQRRRQRKMKGG"
BASE COUNT          269 a          725 c          612 g          324 t
ORIGIN      
        1 gtgctgcgga tcctcgacca catcgagcgc cgccaccccc agatgccgac ggtgatcatg
       61 ggcgacacca acgaatggcg ggtcaacggt ccgtgcctcc aggaattcga cgatcgcttc
      121 gcaatcgccg attgcggccc cagcttccac agccgccggc cggtcgccca gctcgaccgg
      181 atcatcgtcg accgccgctt cgccatcgcc gggtccgggg tccacgccag cgccgccgcc
      241 aagaccgcct cagaccacct cccggtgtgg gctcggctga ctctttaggc cgtcccagaa
      301 aaagctggaa atgtaggatt ttcgttgcca ggcccggtcg gaaagcgccg actcggcgcg
      361 ctgccggctc tttcaaccgc caactgtggc aaccgtgaaa agtgtgaaaa gtcgcgcgcc
      421 tggaccgcct cagccgccct tcatcttgcg ctgccgccgg cgctggaccg acgagccgat
      481 gcccatcgcc tcgcggtact tgaccaccgt ccgccgcgcg atgtcgaagc ccttggcctt
      541 gagcagcccg gcgatggcgt cgtcggacag gatctcggtt tcgccctcga tcagccgcct
      601 gatctcggcc ttgaccgctg gggccgcggc gccctcgccg ctgtccgacg cgacacccga
      661 cccaaagaaa tatttgagct cgatcagccc gcgctcgcac agcaaggtct tattctgggt
      721 gacccggctg acggtcgatt cgtgcattcc gatcgcctcg gccacctcgc gcagggtgag
      781 cggccggagc gccgcgacgc cgcgctcgaa gaacgcctgc tggcgcttga cgatctcggc
      841 cgcgaccttg gtcacggtct gggcgcgctg gtcgagcgct cggaccagcc agccggcgct
      901 cgccaggcgt tcgctgagcc aggcgcgcga cgccttgtcg ctcgcgctgc gcttcaactc
      961 ggtatggtag cggcggttga ccagcacccg cggcagagtc gccggattga gctcgaccga
     1021 ccagccgctc ttggtctggc ggaccagcac gtcgggctcg gccgccgccg gcgcgtcctc
     1081 cggcgcgaag cggcagccgg gcttggggtc gtagccgcga agctcggcga ccatgtcggc
     1141 cagatcctcg tcgtcgaccc cgcagatccg cttgaggtcg gccatccgcc ccttggccag
     1201 caggtcgagg ttggcaatca gccgcgccat cgccgggtca tggcggtcgg cggccttggc
     1261 ctgcagcgcg atgcattcct cgaggctgcg cgccgcgatc cccggcggat cgagcgattg
     1321 gaccagcgcc agcgccgcct ccgcctcctt gaggctcgcg cccagctcct cggcgatgac
     1381 cgccagcgga gtctcgaggt agccggtctc ctcgagctcg cggacgatcg cttcggccag
     1441 cccgccaagc gtcccgccgg tgccgcgcaa ttgctcgagc agatgctcgg ccagcccgct
     1501 ttcgcgctca ctgacccgct cgaagtcgaa cccctcgtca ctgcccgttc caaggtcgct
     1561 gccgctgtcg agttcggtcg catcctcgcg ccagtcgcgg tcgagtgcct cctctccttg
     1621 gccgccgagc tggtcggcgc cagccggatc ggccgcctcg tcgccggttt cgcggtcttc
     1681 gcgcaccacc accccttcct cgcccgcgcc ctcgctggga cgcatctcga gcagcgggtt
     1741 cctggccatc tcctcggcga tcgccgcttc gagttcgacg ttgctcagcg caagcagctt
     1801 gatcgccgcc tgcagctgct ggctcatcac cagcgtctgg gcggtacgca gctgcaggcc
     1861 ggggccaagt gccatggccg ccagccttag agcgtaaagc tctcgccgag atagagccgg
     1921 cgcacttcgg
//
LOCUS       DATAIQ010000359         1965 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_19172, whole genome shotgun sequence.
ACCESSION   DATAIQ010000359 DATAIQ010000000
VERSION     DATAIQ010000359.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1965)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1965)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1965
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_19172"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..843)
                     /locus_tag="VHN20_06120"
     CDS             complement(<1..843)
                     /locus_tag="VHN20_06120"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012336118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEX2725377.1"
                     /translation="MSHFATFGLSAPILNALATEGYTHPTPIQSQAIPHVLSGRDLCG
                     IAQTGTGKTAAFALPILERLAKAPRPLSRKACRTLVLSPTRELAMQIADSFRAYGRHL
                     RLSTAVVFGGVSVGKHERALAGGVDILVATPGRLLDLVDRRALTLREVEILVLDEADQ
                     MLDLGFIHALKRIVTLLPRERQTLFFSATMPNNIAALADAYLRDPTKVAVAPVATTAE
                     RVEQRVMFVTSAQKPALLASVLQDPTIDRVLVFTRTKHGADKVVRYLDKAGIGAAAIH
                     GNKSQ"
     gene            1736..1930
                     /locus_tag="VHN20_06125"
     CDS             1736..1930
                     /locus_tag="VHN20_06125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014892822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6494 family protein"
                     /protein_id="HEX2725378.1"
                     /translation="MDEDAFNMAVRKFLKEVGVTSQREIERLVREGQPKGPALRLKMT
                     LTCEDAPGFEHIVERTIELR"
BASE COUNT          358 a          593 c          689 g          325 t
ORIGIN      
        1 ctggcttttg ttgccgtgaa tggcggccgc cccaatgccg gccttgtcga gatagcggac
       61 gaccttgtcg gcgccatgct tggtgcgggt gaacacgagc acgcggtcga tcgtcggatc
      121 ctgcagaacg cttgccagca gcgccggttt ttgcgcgctt gtcacgaaca tgacgcgttg
      181 ctcaacgcgc tcggcggtgg tcgccaccgg cgcaaccgcc accttggtag gatcgcgaag
      241 gtaggcgtcg gccagcgcag cgatgttgtt cggcatggtt gccgaaaaga acagggtctg
      301 ccgctcgcgg gggagcagcg tcacaatacg cttcagcgca tgaatgaagc cgagatcaag
      361 catctggtcg gcttcgtcga gcacgaggat ctcaacctcg cgcaacgtca gggcgcggcg
      421 atcgacgaga tcgaggagcc ggcccggcgt cgccacaagg atgtcgacgc cccctgccaa
      481 tgcgcgctcg tgcttgccga cggagacgcc gccgaagacg acggcggtcg aaaggcgcag
      541 atggcgcccg taggcgcgga agctgtcggc gatctgcatg gccaactcac gcgtcgggct
      601 cagcacgagc gtgcggcagg ccttccgcga cagtggccgc ggcgccttgg cgaggcgctc
      661 gaggatgggc agcgcgaaag ccgcggtctt tccggtgccg gtctgggcga tgccgcagag
      721 gtctcggccg ctcagcacgt gcggaatggc ctgcgactgg atcggagtgg ggtgggtgta
      781 accctcggtt gcgagagcat tcagaatcgg cgcggagagg ccgaaggtcg cgaaatggga
      841 caaatgtccg tcctttatac gaagcgggag ccagcggcgg acgcccgtca tgaggcgggc
      901 aagccggcgg cgctgtggtc gacccgcgtg atgaggggcg gtccgggcga agaagcgatt
      961 gaagaaggag gccgggtctc ttaagggacc gtcacgctgc ctcgctcaag cccttggggc
     1021 tgacgctctg gccggtatat ggcccgtggc gggttaaaaa tcaatgcata ttcctcccca
     1081 agctgacgac cgatcgggtt atccccttgt gcaacggacg tgcagacgcc cttccggagc
     1141 ctggcgaggg cgaacgacac ggtcgttcag tgatcgcgac gcgatcgcaa catccggaga
     1201 gccgggatgc ttaatgcggt gccggcaatg tggattctcg gattaacgaa tgcgcaggaa
     1261 aatacgtggt gagatagctt tcctggagga agacgatgcg acagctccct tcccggtttg
     1321 ctcaagtcga tgcggcgtcg gccgcttcgc tgcaacgcct cgaactccac gtcacatccc
     1381 tgcaggcgcg actcggcgcg atcgaaaccc ggctggacaa gctcaggagg ctgaaggtgt
     1441 gtgccacccc tgagcgccca acgcgcaggc tccattagag cgggatcggg cgaggccgga
     1501 tcgatcgcgc cccgctcgcc ttcaagggtg gatgatccgg atcaacctcg ggcgagcctt
     1561 ggtcggcaag gtgccgcacc ggaccatggg cacgcccagg ccttcgccat gtcgccggca
     1621 ggttcgtgct tctgcccggt cggcacttca gccgtccgtc gccggctttg cattcctcgt
     1681 gtacaacggg atcaggggtg ccggccctcg gggcccggga tgggaggaga ccagcatgga
     1741 cgaagacgca ttcaacatgg cggtgcgcaa gttcctcaag gaggtcggcg tcacgtcgca
     1801 acgcgagatc gagcgcctgg tccgcgaggg gcagccgaaa gggccggcac tgcgcctcaa
     1861 gatgacgctc acgtgcgaag acgcgcccgg cttcgagcat atcgtcgaga ggaccatcga
     1921 gctcaggtga gccgtaccct ggcgtttggt gcagcggcag gcgac
//
LOCUS       DATAIQ010000360         6325 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_296523, whole genome shotgun sequence.
ACCESSION   DATAIQ010000360 DATAIQ010000000
VERSION     DATAIQ010000360.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 6325)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6325)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6325
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_296523"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1154
                     /locus_tag="VHN20_06130"
     CDS             <1..1154
                     /locus_tag="VHN20_06130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012335036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="toprim domain-containing protein"
                     /protein_id="HEX2725379.1"
                     /translation="PAKAELLIVEGDSAGGSAKMGRDRAFQAVLPLRGKILNVERVRL
                     EKMLSSEQIGTLIMALGTGISEEFVADKARYHKIIIMTDADVDGAHIRTLLLTFFYRQ
                     MREVIERGHLYIAQPPLYKATRGKSAMYLKDERALEDFLIDSGIEGAVLRLASGLEFA
                     GPQLRALINEARLVRQVIAGLHSRYDRTAVEQAAIAGALRPELADDPERAQSIAEYIA
                     RRLDALAEDIERGWAGEARDGGYVFSRTIRGVRQVATLDAALIGSQEARKLDEHAAKL
                     QEVYAKSAILVRKGDETAIHGPVALSDAVMALGRKGLQLQRYKGLGEMTAQQLWETTL
                     DRDVRSLLQVKLKDLADADDLFVKLMGDVVEPRREFIQENALSVANLDV"
     gene            1505..2926
                     /locus_tag="VHN20_06135"
     CDS             1505..2926
                     /locus_tag="VHN20_06135"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX2725380.1"
                     /translation="MSADMVMALVNPFRVDTASTPLMRAQLAAFTKQVPLLYFILSVN
                     AAVLAFAFADAAPRWLSIGVPAGLISVCAIRFVTWVRSRGRQLSDAAVRKRLQATVIL
                     GAVIGVLFLSWALALFPYGSERGQDHVTFFVAITVISCIFCLMHLRPAALLLTCVIVI
                     PFVLFLLSTGDASLVSIAINLGLVSVAMVYVLVVASRDFAELVRSQLEARSLAEKLET
                     KVRERTHALELALDAAQEASRAKSLFLASMSHELRTPLNAVIGYSEILLEDAQLEGCA
                     GQLTDLEKINAAGKHLLGLINDVLDLSKIEAGSLQIDRVTIDLAPFLREIVDSCGPLA
                     ARNGNTVEIEVARDATTIAADPTRLRQSLISILSNACKFTQQGSIRVSADRDEQWLRL
                     AVRDSGIGIAPDHLAKLFTNFTQANSEIGAKYGGTGLGLALSQKLCQLMGGRIVAESR
                     VGEGSCFTIHLPLEPPLDTRLAA"
     gene            3033..3944
                     /locus_tag="VHN20_06140"
     CDS             3033..3944
                     /locus_tag="VHN20_06140"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020174237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX2725381.1"
                     /translation="MDHTDEPIGTERTAVIIATSGRPAIVGQLVEILRDQTQPPDHVF
                     VVAAKPADVSGLNVGQGQVTAIVGRPGSSSQRNDGLDLAGSRFSQIVFFDDDFIPSRF
                     WLERLTRLFRSRPDVSGVTGTLLRDGAPTAGIALAEAQAIVATRDADPVGDEALHEPV
                     GWGGNTGCNMAFRHSAIRDLRFDEHLPGYAWLEDADFRGQVVRRGRFVRADALWGVHL
                     GHKAGRSRGVPLGYSQIANSVYLARKGTVPAPYLARLAVRNVISNLVHSVLPAPFIDH
                     RGRLMGNLIALADLVLCRISPERMLGL"
     gene            4038..5405
                     /locus_tag="VHN20_06145"
     CDS             4038..5405
                     /locus_tag="VHN20_06145"
                     /inference="COORDINATES: protein motif:HMM:NF024832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide biosynthesis protein"
                     /protein_id="HEX2725382.1"
                     /translation="MIPFAPGLSSRTAAVRDRALRLARHENLLAVLKSASLVFVIRIA
                     GAGLTYASMICLARWLGAFDFGIYAFVSVIVTLVGLALSAGFNSSALRFIPDYLARQK
                     WQRLSGFLARSYAIVFAISVLGALIAAALVVAFRGMIEPYYFVPLLVGLLCVPVWTLL
                     SQGEVTARAFGWVHLAYVPGYIARPVLLLMFVGGLLLVRPADAVAALWGFMGACAVAA
                     LGQGVILHRRIRERVTAPGARHHTQHWLTISLGFLMVDGFRMLLDNADVLLIGKLLDP
                     HSVAVYYAAIRTGGLVAFVSFSIIALAVPKFAEIHATGTRAELQKFVTGVIQMTFWPS
                     LLAAVALAALGPFVMSLFGPDFEGGYATMLVVLAGLVLRAATAPAEHLLNVTGYHRDT
                     MRVYAVAAIANVALNLLLIPRLGIMGAAIATYTAMLSGNAWLYVLVRRRLGVSAFVFG
                     ARARA"
     gene            complement(5416..>6325)
                     /locus_tag="VHN20_06150"
     CDS             complement(5416..>6325)
                     /locus_tag="VHN20_06150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014494468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="YfbK domain-containing protein"
                     /protein_id="HEX2725383.1"
                     /translation="IERLDAGGSTAGAEGIRQAYALAEASFDANGVNRVLLTTDGDFN
                     VGITSRDELKGFVERKREKGIFLSVLGFGMGNYNDALMQALAQNGNGTAAYIDTLAEA
                     RKTLVEEATSTIVPIAKDVKLQVEFNPAQVAEYRLVGYETRALRREDFNNDKVDAGDV
                     GSGHTVTAIYEIVPVGGPRVNNDLRYAPAPTASPSAASEIGFLSMRYKLPKSETSQLV
                     TTPIGGGASYARFDDAPQEARFAVSVAGFAELLRGGRYTGALTYDDVIRTATAARGDD
                     PFGYRAEFVQLVRAAKSAGAMQAQPR"
BASE COUNT          899 a         2214 c         2060 g         1152 t
ORIGIN      
        1 atccggccaa ggccgagctg ctgatcgtcg agggcgactc ggccggcggc tcggccaaga
       61 tgggacgcga ccgcgcgttc caggcggtgc tgccgctgcg cggcaagatc ctcaacgtgg
      121 agcgcgtgcg gctggaaaag atgctgtcgt ccgagcagat cggcacgctg atcatggcgc
      181 tcggcaccgg catcagcgag gaattcgtcg ccgacaaggc ccgctaccac aagatcatca
      241 tcatgacgga cgccgacgtc gacggtgcgc atatccgcac tttgctgctg acgttcttct
      301 accggcagat gcgcgaggtc atcgagcgtg ggcacctcta catcgcgcag ccgccgctct
      361 acaaggcgac gcgcggcaag tccgccatgt acctgaagga cgagcgcgcg ctcgaggact
      421 tcctcatcga ctccggcatc gaaggcgcgg ttctgcgcct cgcgtcgggc cttgaattcg
      481 ccggcccgca gctgcgtgcg ctgatcaacg aggcgcgcct cgtgcgccag gtgattgccg
      541 gcctgcacag ccgttacgac cgcaccgccg tcgagcaggc ggcgatcgcc ggggcgttgc
      601 gtcccgagct cgccgacgat ccggagcgcg cgcagtccat cgccgagtat atcgcccgcc
      661 gcctcgacgc cctcgcggag gacatcgagc gtggctgggc cggcgaggcg cgcgacggcg
      721 gctacgtgtt cagccgcacg atccgcggcg tgcgccaggt cgcgaccctc gacgccgcgc
      781 tgatcggcag ccaggaggcg cgcaagctcg acgagcacgc cgccaaattg caggaggtct
      841 atgccaagtc ggcgatcctc gtgcgcaagg gcgacgagac cgcgatccac gggcccgtgg
      901 cgttgtccga tgccgtcatg gcgctcggcc gcaagggcct ccagctgcag cgctacaagg
      961 gtctcggcga gatgaccgcg cagcagctct gggagaccac gctcgaccgc gacgtgcgct
     1021 cgctcctgca ggtcaagctc aaggacctcg ccgacgccga cgacctgttc gtcaagctga
     1081 tgggcgacgt cgtcgagccg cgccgcgagt tcatccagga gaacgcgctg tcggtcgcca
     1141 atctcgacgt gtgatccggc gatgttgagg ctcgtcccgg acctgatccg ggatcaccat
     1201 gcggcaaagg cgcaacgggg cgggaccggt tcaatccgat tgatcccgct ctgacgcgcc
     1261 ctgctcgctc gggcgcgccc ctccgcgtct gcgcttcagc cgggcgtgga ggaatgcgca
     1321 tggcccccgg gtagaccttc gcgcccctcc cgccttctct gattcgcctt ggagccgact
     1381 gcctggtctg ccgccatctt caagggcggg tcgcgacgcg ttcaccgatg ctcaacgaag
     1441 ttttgccagc atcgatgtcc cgcatcccgg caagtggctc tcgtgccgtc tccggctccg
     1501 acggatgagt gccgacatgg tgatggccct cgtgaatccc ttccgggtcg acacggccag
     1561 cacgccattg atgcgcgccc agctggccgc cttcacgaag caggtcccgc tcctctattt
     1621 cattctttcg gtcaatgcgg ccgtgctggc cttcgcgttc gccgatgccg ctccgcgatg
     1681 gctttccatc ggcgttcccg caggcctcat ctccgtctgc gcgatccgtt tcgtgacctg
     1741 ggtgcgatcg cgagggaggc agctctcgga cgccgctgtg cgcaagcgtc tgcaggcgac
     1801 cgtgattttg ggtgccgtca tcggggtgct tttcctgagc tgggccttgg ccctgttccc
     1861 ttacggatcc gagcgcggac aggatcacgt cacgttcttt gtggcgatca cggtgatcag
     1921 ctgcattttc tgcctcatgc atctgcggcc ggcggccttg ctgctgacct gcgtgatcgt
     1981 catcccgttt gtgctcttcc tgctctcgac gggcgatgcc agcctcgtgt cgatcgccat
     2041 caatctcggc ctcgtctcgg tcgcgatggt ttatgttctc gtcgttgcgt cgcgcgactt
     2101 cgccgagctg gtccggagcc aactcgaggc caggagcctg gcggagaagc tcgagaccaa
     2161 ggtccgcgag cgcacgcacg cgctggagct ggcgctcgat gccgcgcaag aggcgagccg
     2221 ggccaagagc ctgttcctcg ccagcatgag ccacgagtta cgcacccccc tgaacgccgt
     2281 gatcggctac agcgagatcc tgctcgagga cgcgcagctt gaaggctgcg ccggccaact
     2341 aaccgatctt gagaagatca acgcggcggg aaagcacctc ctcgggctga tcaacgacgt
     2401 gctcgacttg tcgaagatcg aggccggcag cctgcagatc gaccgcgtca cgatcgatct
     2461 cgcgccgttc ctgcgggaga tcgtcgatag ctgcggtcca ctcgccgcca ggaacggcaa
     2521 caccgtcgag atcgaggtcg ctcgcgacgc cacgacgatc gcggcggacc ccacccggct
     2581 gcgccagagc ctcatcagta tcttgagcaa cgcgtgcaag ttcacgcagc agggctcgat
     2641 ccgcgtgtcc gccgatcgcg acgagcaatg gctccggctc gccgtgcgcg acagcggcat
     2701 cggcatcgcg ccggatcacc tggcaaagct gttcaccaac ttcacccagg caaacagcga
     2761 gatcggtgcg aaatacgggg gcaccggcct cgggctcgcc ctcagtcaga agctctgcca
     2821 gctgatgggc ggccgcattg tcgccgaaag ccgcgttggc gaagggtcgt gcttcacgat
     2881 tcacctgccg cttgagccgc cactcgacac gcggctcgcg gcctgaggcg tttggtcggg
     2941 aggacagcca cggatgcact cgctggactc ccaggaatgt ggcacaacct gtgtctcgat
     3001 aagcggcgat aagtccgctc cacgggactg acatggacca taccgacgag cctatcggga
     3061 ctgagcgcac cgccgtcatc atcgcgacga gcggccgccc cgccatcgtc ggacagttgg
     3121 tggagatcct cagggatcag acgcagccgc cggaccacgt tttcgtcgtc gccgccaagc
     3181 ccgccgatgt ctcggggttg aacgtgggcc agggccaggt gacggccatc gtcggccgcc
     3241 ctggctcctc gtcgcaacgc aacgacgggc tggacctcgc cggctcgcgg ttttcccaga
     3301 tcgtgttctt cgacgacgat ttcatcccgt cgcgtttctg gctcgagcgc ctgacccgcc
     3361 tgttcaggtc ccgaccggac gtcagcggcg tgaccggcac cctgttgcgg gacggggcgc
     3421 cgaccgccgg gatcgcgctc gccgaggcgc aggccatcgt cgcaacgcgg gacgccgatc
     3481 cggtcggcga cgaggccttg cacgagcccg tcggctgggg cggcaacacc ggctgcaaca
     3541 tggcgttccg gcactcggcg atccgcgacc tgcgcttcga cgagcatctg cccggttatg
     3601 cttggctcga ggatgccgat ttccgcggcc aggtcgtcag gcgcggccgt ttcgttcggg
     3661 ccgatgccct gtggggcgtc catctcggcc acaaggcggg gcggtcgcgc ggcgttccac
     3721 tcggctattc gcagatcgcc aattcggtct acctcgcccg caaggggacg gtgcctgcgc
     3781 cctatctggc gcggctggcc gtccggaacg tcatcagcaa cctggtgcac tcggtcctcc
     3841 ccgcgccgtt catcgaccat cgcgggcgtc tcatgggaaa tctgatcgct ctcgcagatc
     3901 tcgtcctctg ccggatttcg cccgagcgca tgttagggct ttgacaatgg ttgcggctca
     3961 gactgcgttc cgcttcgtgc ggccccactc ccgtggcgcg cgcccggacg acgtgcgtcc
     4021 ggcctggtga actcccgatg attcctttcg cccccggtct gagctcgcgc acagcggccg
     4081 tccgggatcg ggcgctccgc ctggcgaggc acgaaaatct cctcgccgtc ctgaaaagcg
     4141 ccagcctcgt cttcgtcatc cgcatagcag gcgccgggct cacctatgcg tcgatgatct
     4201 gtctcgcgcg ctggctcggc gccttcgact tcggcatcta cgcgttcgtt tccgtcatcg
     4261 tcaccctcgt cggcctcgcc ctgtccgccg gcttcaattc gtcggcgctg cgcttcatcc
     4321 cggattacct ggcgcggcag aaatggcagc gcctgagcgg cttcctggcg cgcagctacg
     4381 ccatcgtctt tgcgatcagc gtgcttggcg cgctgatcgc cgcggcgctg gttgtcgcgt
     4441 tccgcggcat gatcgagccc tactactttg tgcctttgct cgtcggcctg ctctgtgtcc
     4501 ccgtgtggac gctgctgagc cagggcgagg tgaccgcgcg cgccttcggc tgggttcatc
     4561 tcgcctacgt gccgggctac atcgcccgcc ctgttctgct gctcatgttc gtcggcgggt
     4621 tgctcctggt gcggccggcc gacgccgttg ccgccctatg gggattcatg ggcgcctgcg
     4681 cggtcgccgc gctcgggcag ggcgtcatcc tgcaccggcg catccgcgag cgcgtgacgg
     4741 cgccgggggc tcgtcatcac acgcagcact ggctcaccat ttcgctcggc ttcctcatgg
     4801 tcgacggctt ccgcatgctg ctcgacaacg ccgacgtcct cctgatcggc aagctgctcg
     4861 acccgcacag cgtcgccgtc tactacgccg ccatccgcac cggcggcctt gtcgccttcg
     4921 tgtcgttctc catcatcgcc ctcgccgtgc cgaaattcgc ggaaatccat gcgacgggga
     4981 cgcgcgccga gctgcagaaa ttcgtcaccg gcgtgatcca gatgacgttc tggccgtcgc
     5041 tgctcgcggc cgtcgcgctg gccgcgctcg ggccgttcgt gatgtcgctg ttcggcccgg
     5101 atttcgaagg cggctatgcg acgatgctcg tcgtgctcgc cgggctcgtg ctgcgcgccg
     5161 ccacggctcc cgccgagcac ctcctcaacg tcaccggcta ccatcgcgac acgatgcgcg
     5221 tctacgcggt cgccgccatc gccaacgtcg ccctcaacct gctgctcatc ccgcggctcg
     5281 gcatcatggg cgcggcgatc gccacctata cggccatgct gagcggcaac gcatggctgt
     5341 atgtcctcgt gcgccggcgc ctcggcgtca gcgccttcgt gttcggcgcg cgcgcgcggg
     5401 cgtgagcgcg gcgcatcatc gcggctgcgc ctgcatcgcg cctgccgatt ttgccgcgcg
     5461 cacgagctgg acgaactcgg cgcggtagcc gaacgggtcg tcgcccctgg ccgcggtcgc
     5521 ggtgcggatc acgtcgtcgt aggtgagggc gcccgtgtag cgaccgcccc tgagcagctc
     5581 ggcgaagccc gcgactgaga ccgcgaagcg cgcttcctgc ggcgcgtcgt cgaaccgcgc
     5641 gtagcttgcg ccccctccga tcggcgtcgt cacgagctgg ctcgtctcgg actttggcag
     5701 cttgtagcgc atcgacagga agccgatctc gctcgcggcg gacggcgagg cggtcggggc
     5761 gggcgcgtag cgcaaatcgt tgttcacgcg aggcccgccg accggcacga tctcgtagat
     5821 ggcggtgacc gtatggccgg agccgacatc gcccgcgtcg accttgtcgt tgttgaaatc
     5881 ctcgcggcgc agcgcgcgcg tctcgtagcc gaccagccgg tattcggcga cctgcgcggg
     5941 gttgaactcc acctgcagct tcacgtcctt ggcgatcggc acgatcgtcg aggtcgcttc
     6001 ctcgaccagc gtcttgcgcg cctcggcgag cgtgtcgatg taggcggcgg tgccgttgcc
     6061 gttctgcgcc agggcctgca tcagcgcgtc gttgtagttg cccatgccga agccgagcac
     6121 ggacaggaag atgcccttct cgcgcttgcg ctcgacgaaa cccttgagct cgtcgcgcga
     6181 ggtgatgccg acgttgaagt cgccgtcggt ggtgagcagg acgcggttga cgccgttggc
     6241 gtcgaagctc gcctcggcca gcgcgtaggc ctggcggatg ccttccgctc ccgccgtgga
     6301 gccgcccgcg tcgagacgct cgatc
//
LOCUS       DATAIQ010000361         1633 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_296592, whole genome shotgun sequence.
ACCESSION   DATAIQ010000361 DATAIQ010000000
VERSION     DATAIQ010000361.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1633)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1633)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1633
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_296592"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..280)
                     /locus_tag="VHN20_06155"
     CDS             complement(<1..280)
                     /locus_tag="VHN20_06155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725384.1"
                     /translation="MSGLRDLRHSEWARFVLPAVAFMAVALYPIFADPLSGTMGDVIV
                     ALAYVVMALGLNIVVGFAGLLDLGYVAFYAFGALATGWLASDFLTGAGG"
     gene            complement(277..1287)
                     /locus_tag="VHN20_06160"
     CDS             complement(277..1287)
                     /locus_tag="VHN20_06160"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015658 - branched-chain amino acid
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX2725385.1"
                     /translation="MWEFISKYGLIALLIAFPAYFAISDVLAGDGLSRIGNNLVAGVS
                     NGSIWALVALGYTLVYGIIELINFAHGEVFMIGSFVAFALYEPLGLTLETGVAGLAAG
                     LFVCLILSMLASGSLNVMIERVAYRPLRTAPKLAPLITAVGVSFILQNVGILWLGSSQ
                     AGIPDLIRAQQEVFSIGGVKIQRADVLAIAVTAPLVFLLTTFVSRSRLGKAMRATAQD
                     PEAARLMGINVDTTISLTFLLGGLMAGAAGLIYALYQTSVWYFQGFTAGLIAFTAAVM
                     GGIGNLRGAVIGGLIIGCIQQISDNRIGNEWTPAVVFAYLVLIMVFRPQGLIGEETRE
                     AG"
     gene            complement(1421..>1633)
                     /locus_tag="VHN20_06165"
     CDS             complement(1421..>1633)
                     /locus_tag="VHN20_06165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725386.1"
                     /translation="ALDTLKAAGDKANDRKVVAEQLVGKTKGRNSVLGTYDIDENGDT
                     TLTDYGLYTIEDGELTFSKVIKAQGG"
BASE COUNT          287 a          523 c          575 g          248 t
ORIGIN      
        1 cgccgccggc gcccgtgagg aagtcggatg cgagccatcc ggtggcgagc gcgccgaatg
       61 cgtagaaggc gacgtagccg aggtcgagca ggccggcgaa gccgaccacg atgttgagtc
      121 cgagcgccat caccacgtag gcgagcgcga cgatgacatc gcccatcgtg ccgctgagcg
      181 ggtcggcgaa gatcgggtag agcgcgacgg ccatgaacgc gaccgccggg agcacgaagc
      241 gcgcccactc cgagtggcgc aggtcgcgca ggccgctcat ccggcttccc tcgtctcctc
      301 gccgatcagg ccctgcggcc tgaacaccat gatcagcacg aggtaggcga acaccacggc
      361 gggcgtccac tcgttgccga tccggttgtc ggagatctgc tggatgcagc cgatgatcaa
      421 gccgccgatc acggcgccgc ggaggttgcc gatgccgccc atcaccgcgg cggtgaaggc
      481 gatcaggccg gcggtgaagc cctggaagta ccagaccgac gtctggtaga gcgcgtagat
      541 caggccggcg gcgcccgcca tcaggccgcc gagcaggaag gtgagcgaga tcgtggtgtc
      601 cacgttgatg cccatcaggc gcgcggcctc ggggtcctgc gcggtggcgc gcatcgcctt
      661 gccgagccgg ctacggctga cgaaggtggt gagcaggaac acgagcggcg cggtgaccgc
      721 gatggccagc acgtcggcgc gctggatctt cacgccgccg atcgagaaga cctcctgctg
      781 cgcgcggatc aggtcgggga tgccggcctg cgagctgccg agccacagga tgccgacgtt
      841 ctggaggatg aacgagacgc cgacggccgt gatgagcggc gcgagcttgg gcgccgtcct
      901 cagcggcctg tacgccacgc gttcgatcat cacgttgagc gagccgctcg cgagcatcga
      961 gaggatgagg cacacgaaca ggccggcggc gagaccggcg acgcccgtct cgagcgtcag
     1021 gccgagtggc tcgtagagcg cgaacgcgac gaacgagccg atcatgaaca cctcgccgtg
     1081 ggcgaagttg atcagctcga tgatgccgta gacgagcgtg tagccgagcg ccacgagcgc
     1141 ccagatcgag ccgttcgaca cgccggcgac gaggttgttg ccgatccgcg agagcccgtc
     1201 tcccgcgagc acgtcggaga tcgcgaagta cgcggggaac gcgatcagca gtgcgatcag
     1261 gccgtacttc gagatgaact cccacacggt cgatcccgcg cttgagcgca ccgttggagc
     1321 cgttactgaa cctgattcca aagttgtatc ggccgccgtt tagatccgag cggggggcgg
     1381 gccgtgcggc ccgccccctt gctcgattcc tggtgggtga tcagccgccc tgggccttga
     1441 tcaccttgct gaacgtcaac tcaccatcct cgatggtgta gaggccgtag tcagtcaggg
     1501 tcgtgtcgcc gttctcatcg atgtcgtacg taccgagaac ggagttgcgg cccttggtct
     1561 tgccgaccag ctgctccgcg acaaccttgc ggtcgttggc cttgtcgcca gcggccttca
     1621 gggtgtcgag ggc
//
LOCUS       DATAIQ010000362         3504 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_19368, whole genome shotgun sequence.
ACCESSION   DATAIQ010000362 DATAIQ010000000
VERSION     DATAIQ010000362.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3504)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3504)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3504
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_19368"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(75..1709)
                     /locus_tag="VHN20_06170"
     CDS             complement(75..1709)
                     /locus_tag="VHN20_06170"
                     /EC_number="1.14.13.127"
                     /inference="COORDINATES: protein motif:HMM:NF004831.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid
                     hydroxylase"
                     /protein_id="HEX2725387.1"
                     /translation="MNERECDVAVVGAGPTGLTLCNLLGLAGLRVVLIERNTTTVQEP
                     RAVSIDDEALRTMQSAGLIEEVLKDVALDYGSHYFTAEGACFAKVEPKTREFGYPRRS
                     AFTQPKLEAVLREGLSRFASVTTLFGHSCESVRESADGVIIAARPGDGPDVIVRASYL
                     VGADGARSTIRRVIGAEMVGSTYQQRWLIVDLASTKEQFRQTRVVCNPKRSMITLPGP
                     HGIRRYEFMLRQDETDATATAPDFVRELLAAHGPDADSPVVRRQVYTFHARIANRWHS
                     NRVFLAGDAAHLSPPFAGQGMNSGVRDAHNLAWKLAAVVQGRLGPGVLATYERERSPH
                     AWALIKLAVNMGRVMMPTSRWQARAVQSAFQATRFVPPVQAYFAQMKYKPKPFYREGF
                     LVEGDALGLVGRMIAQPLLEVRWHLCVRLDDLIGNSFGLVAVGPNAQKILEGARAAEL
                     SLANVRPVAVLPSRFNPDPHGPGDILAGRDVDDVLAGPAANGRDMLLLVRPDRYVAAA
                     AHIEAPTQVASFTVAVNGLVDATWSGRLRPPPAALT"
     gene            complement(1722..2582)
                     /locus_tag="VHN20_06175"
     CDS             complement(1722..2582)
                     /locus_tag="VHN20_06175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018494339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEX2725388.1"
                     /translation="MKFVSFTAAGWSSYGVAHERGIFDLGVRLGDIVPDLKTYIEARE
                     RGLLAPVPSTSAADYRFDEVTYDPVIPFPGKVICVGLNYEEHRVETGRPESSYPSLFT
                     RFADTLIGHRAPIIRPRVSTALDYEGELAVVIGREGFRVPRDKALDIVAGYACFNEGT
                     LRDWQRHTHQFTPGKNFPNTGAFGPELVTPDEISRFDDLKIETRLNGNVMQSAKLGDM
                     IFSVPHIIEYVTAFTPLSPGDVIATGTPGGVGFKREPQLYMKPGDVVEVTIESVGHLV
                     NEVRDESDIA"
     gene            complement(2594..3433)
                     /locus_tag="VHN20_06180"
     CDS             complement(2594..3433)
                     /locus_tag="VHN20_06180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012653806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX2725389.1"
                     /translation="MTTTAVKAGAYLHHVHLQSPQPERLAAFYGDAMDMSVERGADHT
                     WLCSGPGRKLLVGEGPAKTLAHGAFACRDREGLEELRARAESEGLAPQAFSTALFAQD
                     PFAVTDPDGNRIVFGLAAEEPAGRRGLKGPIQHLTLATRDVGQIEAFYAGKLGFAVSD
                     RVRNEAGQVTTSFMRTNHEHHTLACFRSNRQGIDHHSYEAGEWNVIRDWADRFAERDI
                     QLMWGPGRHGPGNNLFIFIEDPDGNWIEVSAELEVIHDRPVKEWPHAERTLNLWGRAI
                     MRS"
BASE COUNT          567 a         1154 c         1213 g          570 t
ORIGIN      
        1 gatggccagg acgagcccgg ccgtaacagt ggagggttag cggaacagat acgcaccgaa
       61 accgatcgct tcggtcatgt caacgcggcc ggcggcggcc gcaaacggcc gctccacgtg
      121 gcatcgacga gcccgttgac cgcgaccgta aacgaagcaa cctgcgtggg ggcctcgata
      181 tgcgccgcgg ccgcgacgta tcgatcgggc cggaccagca gcagcatgtc gcggccattc
      241 gcggccgggc cggcgagcac gtcgtccacg tcgcggccag ccaggatgtc gccggggcca
      301 tgcggatccg ggttgaagcg gctgggcagc accgccaccg gccggacatt ggcgaggctc
      361 agctcggcgg cgcgcgcgcc ctcgaggatc ttttgcgcgt tggggccgac ggcaacgaga
      421 ccgaacgagt tgccgatcag gtcatcaagc cgcacgcaca gatgccagcg cacttcgagg
      481 agaggctgcg cgatcatgcg gccgacgagc ccgagagcat cgccctccac caggaagcct
      541 tcgcggtaaa acggcttcgg cttgtatttc atctgcgcga agtaggcctg caccggcggc
      601 acgaagcgtg tcgcctgaaa cgcggactgg acggcgcggg cctgccagcg cgaggtcggc
      661 atcatcaccc ggcccatatt gaccgccagc ttgatgagcg cccaggcatg cggcgagcgc
      721 tcgcgctcgt aggtcgcgag cacgccgggg ccgagccgcc cctgcacgac ggcggcgagc
      781 ttccaggcga ggttatgcgc gtcccgaacg ccgctgttca tgccctgccc cgcgaacgga
      841 ggcgagagat gcgcggcgtc gccggcgagg aacacgcggt tgctgtgcca tcggttcgcg
      901 atgcgtgcgt ggaacgtgta gacctggcgg cgcaccacgg gcgagtccgc gtcgggcccg
      961 tgcgcggcaa gcagctcgcg gacgaagtcc ggcgccgtgg cggtcgcgtc ggtctcgtcc
     1021 tggcgcagca tgaactcgta gcgtcggatg ccgtgcgggc cgggcagcgt gatcatcgac
     1081 cgcttcggat tgcagacgac gcgggtttgc cggaactgct ccttggtgct ggcgaggtcg
     1141 acgatgagcc agcgctgctg gtaggtcgat ccgaccatct cggcgccgat cacccgccgg
     1201 atcgtgctgc gcgcgccgtc ggcaccgacc aggtatgagg cgcgcacgat cacgtcgggg
     1261 ccatcccccg gacgcgcggc gatgatgacg ccgtccgcgc tctcgcgcac gctttcgcat
     1321 gaatgcccga acagcgtagt gacgctggcg aagcgcgaca ggccttcgcg cagcacggcc
     1381 tcgagcttcg gctgggtaaa ggcgctgcgg cgcggataac cgaactcgcg tgttttcggc
     1441 tcgaccttgg cgaaacacgc gccttcggcc gtgaagtagt gggaaccgta gtcaagggcg
     1501 acgtccttga ggacttcctc gatcaggcca gccgactgca tcgtacgcag cgcctcgtcg
     1561 tctatcgaga cggcgcgcgg ctcctgcacg gtcgtcgtgt tgcgctcgat caggacgacg
     1621 cgaagccccg ccagcccgag gaggttgcac aacgtcaggc ctgtcggccc ggcgccgacc
     1681 acggccacgt cgcattcgcg ctcgttcatc gctgcgctgg attacgcgat gtcggactcg
     1741 tccctgacct cattgacgag gtggccgacg ctttcgatcg tcacctcgac cacgtcgccg
     1801 ggcttcatgt acagctgcgg ctcgcgcttg aagccgacgc cgcccggcgt gccggtggcg
     1861 atcacgtcgc ccggcgacag cggcgtgaag gccgttacgt attcgatgat atgcggcacc
     1921 gagaagatca tgtcgccgag cttcgccgat tgcatcacgt tgccgttcag gcgcgtctcg
     1981 atcttgaggt cgtcgaagcg gctgatctcg tccggggtaa cgagctcggg cccgaatgcg
     2041 ccggtattcg gaaaattctt gccgggcgtg aactgatgcg tatggcgctg ccagtcgcgc
     2101 agcgtgcctt cgttgaagca ggcataaccg gcgacgatgt cgagggcctt gtcgcgcggc
     2161 acgcgaaagc cctcgcggcc gatcacgacg gcgagttcgc cctcgtaatc gagcgcagtc
     2221 gagacgcgcg gccggatgat cggcgcacga tgaccgatca gcgtgtcggc aaagcgggtg
     2281 aagagcgaag ggtaggacga ttcggggcgt cccgtctcga cgcggtgctc ctcgtaattg
     2341 aggccgacgc agatgacctt gcccggaaag gggattaccg gatcataggt gacctcgtcg
     2401 aagcggtagt cggcggcgct ggtcgaaggc accggcgcaa gcaatccgcg ctcgcgcgct
     2461 tcgatatagg tcttgaggtc cggcacgatg tcgccgaggc gcacgccgag atcgaagatg
     2521 ccgcgctcat gcgcgacgcc gtagctcgac cagccggccg cggtgaagga tacgaatttc
     2581 atggggccct ccctcagctc cgcatgatgg cccggcccca gaggttcagc gtgcgctccg
     2641 catgcggcca ttccttgacg ggcctgtcat ggatgacctc gagctccgcc gacacctcga
     2701 tccagttgcc gtccgggtcc tcgatgaaaa tgaacaggtt gttgcccggc ccgtgccggc
     2761 ccggccccca catcagctgg atgtcgcgct cggcgaagcg gtcggcccag tcgcggatca
     2821 cgttccactc ccctgcctcg taggagtggt gatcgatacc ctggcggttg gagcggaagc
     2881 aggcgagcgt gtggtgctcg tggttcgtgc gcatgaacga ggtggtcacc tggcccgcct
     2941 cgttgcgcac gcgatccgac acggcgaagc cgagcttgcc ggcgtagaac gcttcgatct
     3001 gcccgacgtc cctggtggcg agcgtgagat gctggatcgg ccccttgagg ccgcgccggc
     3061 cggccggctc ctcggcggcg aggccgaaca cgatgcggtt gccgtcggga tccgtcaccg
     3121 cgaacgggtc ctgtgcgaac agggccgtcg agaacgcttg cggagcgagg ccttcgctct
     3181 cggcgcgggc gcgcagctcc tccaggcctt cacgatcgcg gcacgcgaac gcgccgtgcg
     3241 caagcgtctt ggccggtccc tcgccgacga gaagttttcg ccccgggccg ctgcacagcc
     3301 acgtgtggtc cgcgccgcgc tcgacgctca tgtccatggc atcgccgtag aacgccgcga
     3361 gacgctccgg ctgcgggctt tgcaggtgca catgatgcag ataggcgcca gctttgacgg
     3421 ccgttgtggt catgccgatc ctccgagacc ggcgtctttt gtggcggcct catgcgcaag
     3481 tcaacggacc caggtcggca agcc
//
LOCUS       DATAIQ010000363         2154 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_296746, whole genome shotgun sequence.
ACCESSION   DATAIQ010000363 DATAIQ010000000
VERSION     DATAIQ010000363.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2154)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2154)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2154
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_296746"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2154)
                     /gene="rnr"
                     /locus_tag="VHN20_06185"
     CDS             complement(<1..>2154)
                     /gene="rnr"
                     /locus_tag="VHN20_06185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015822824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008997 - ribonuclease R activity
                     [Evidence IEA];
                     GO_process: GO:0006401 - RNA catabolic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ribonuclease R"
                     /protein_id="HEX2725390.1"
                     /translation="PSKEEIAAYVARATGKVGKREVARAFGIQGGDRIWLKQMLGELQ
                     DEGVIDRRRRTVHKAGRLPPVLLADITGRDKDGELIAEPAEWDRDEQGPAPRIVVMAH
                     KARPGQPVPGVGDRALLRLTHNVEGEHVRYSGRAIKIIGKHKAQILGVFRAVPNGGGR
                     LVPVDKKAQGREVLVAAGDEGDAHDGDLVTATIAKHGPYGLPHAKVRERLGSLKSEKA
                     VSLVAIHAHNIPHVFPHAVLAEADEAAPATLDGREDWRGLPLITIDPADAKDHDDAVH
                     AVADEDEANPGGYVVTVAIADVAAYVRPGSAMDREALERGNSVYFPDRVVPMLPERIS
                     NDLCSLRPNEDRPALAVRMVVGADGRKKRHSFHRILMRSAAKLSYQQAQAAIDGRPDD
                     TTGPLLDPVLRPLWATYQAVKRARDVREPLNLDLPERKIILKPDGTVDRVDVPDRLDA
                     HRLIEEFMILANVAAAETLEQAGSPLVYRVHNEPSFEKMRALGEVLASIGLKLPKQGA
                     LKPALFNRILSSVEGSEHQTFINEVVLRSQSQAEYAAENLGHFGLNLRRYAHFTSPIR
                     RYADLIVHRALIRARKLGSDGLPANITREQLAEVGARISAAERRAMAAERETVDRLIA
                     HHLADRVGATFEGQISGVTRSGLFIKLANTGADGFVPAATIGADYYRYDEARHALTGD
                     RTGETYRLGDRVEIKLVEAAPVAGALRFELLSEGRV"
BASE COUNT          297 a          715 c          780 g          362 t
ORIGIN      
        1 acgcgccctt ccgacagcag ctcgaagcgc aatgcgcctg cgaccggcgc cgcctcgacc
       61 agcttgatct cgacgcggtc accgagccga taggtctcgc cggtgcgatc gccagtcagc
      121 gcgtgccgcg cctcgtcgta gcgatagtag tcggcgccga tcgtggcagc gggcacgaag
      181 ccgtcggcgc ccgtgttggc gagcttgatg aacaggcccg agcgcgtcac gcccgagatc
      241 tggccctcga aggttgctcc gacccggtcg gcaaggtgat gcgcgatcag gcgatccacg
      301 gtctcgcgct cggcggccat tgcgcgccgc tcggccgcgg agatgcgcgc accgacttcg
      361 gcgagctgct cacgcgtgat gttggccggc aggccgtcgc tgccgagctt cctcgcgcgg
      421 atgagcgccc ggtgcacgat cagatcggca tagcgccgga tcggcgaggt gaaatgcgcg
      481 tagcggcgca ggttgaggcc gaaatgcccg agattctcgg cggcatattc cgcctgcgat
      541 tgcgagcgca gcacgacctc gttgatgaag gtctgatgct ccgagccttc gacgctggaa
      601 aggatgcggt tgaacaatgc cggcttcagc gcgccctgct tgggcagctt taggccaatt
      661 gaggcgagga cctcgccgag cgcgcgcatc ttctcgaacg agggctcgtt gtgcacgcgg
      721 tagacgagcg gcgaaccggc ctgctcgagc gtctccgccg cggcgacgtt ggcgaggatc
      781 atgaactcct cgatcagccg atgggcgtcg agccggtccg gcacgtcgac gcggtcgacc
      841 gtcccgtccg gcttcaggat gatcttgcgt tccggcaggt cgagattgag cggctcgcgc
      901 acgtcgcggg cgcgcttgac cgcctggtag gtggcccaca gaggccgcag cacggggtcg
      961 agcagcggcc ctgtggtgtc gtccggacgg ccgtcgatcg ccgcctgcgc ctgctggtaa
     1021 gacagcttgg cggccgagcg catgaggatg cgatggaaac tgtgccgctt cttgcgcccg
     1081 tcggcgccga cgaccatgcg gaccgcaagc gccgggcggt cctcgttcgg gcgcagcgag
     1141 cagaggtcgt tggaaatccg ctcgggcagc atcggcacca cccggtcagg gaagtagacc
     1201 gagttgccgc gctcgagcgc ctcgcgatcc atcgccgagc cgggacgcac gtaagcggcc
     1261 acgtcggcga tcgccacggt gacgacgtag ccgccaggat tggcctcgtc ctcgtccgcc
     1321 accgcgtgca ccgcgtcgtc gtggtccttg gcgtcggccg ggtcgatcgt gatcagcggg
     1381 aggccgcgcc agtcctctcg gccgtcgagg gtggcgggcg cggcttcgtc cgcttcggcc
     1441 agaaccgcgt gcggaaagac gtgcgggatg ttgtgggcgt ggatggcgac gaggctgacc
     1501 gctttttcgg atttgagcga gccgagtcgc tcgcgcactt tggcgtgcgg caagccataa
     1561 ggtccgtgct tggcgatggt cgcggtgacg aggtcgccgt cgtgcgcatc gccttcgtcg
     1621 cctgccgcca ccagaacctc gcggccttgc gccttcttgt cgaccggcac gaggcggcca
     1681 ccgccgttcg gcacggcccg gaacacgccg aggatctgcg ccttgtgctt gccgatgatc
     1741 ttgatcgccc gcccgctgta gcgcacgtgc tcgccctcga cgttgtgcgt gaggcgtaac
     1801 agggcgcggt cgccgacccc gggaacgggc tggccggggc gggccttgtg cgccatcacg
     1861 acgatgcgcg gcgccgggcc ctgctcgtcg cggtcccatt cggccggctc ggcgatgagt
     1921 tcgccgtcct tgtcacgacc ggtgatgtcg gcgaggagga cgggcggcag gcggccggcc
     1981 ttgtggaccg tgcgccggcg gcggtcgatg acgccctcgt cctgcagttc gccgagcatc
     2041 tgcttgagcc agatgcgatc gccgccctgg atgccgaagg cgcgtgcgac ctcgcgcttg
     2101 ccgaccttcc cggtggcgcg ggcgacgtag gcggcgattt cctctttcga gggg
//
LOCUS       DATAIQ010000364         1563 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_296777, whole genome shotgun sequence.
ACCESSION   DATAIQ010000364 DATAIQ010000000
VERSION     DATAIQ010000364.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1563)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1563)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1563
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_296777"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..310)
                     /locus_tag="VHN20_06190"
     CDS             complement(<1..310)
                     /locus_tag="VHN20_06190"
                     /EC_number="1.10.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018262335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HEX2725391.1"
                     /translation="MFGFGTEYTGLAFWLPLIWAALIAVAVAMYVIMDGFDLGVGILF
                     NAARDENWRDRMMLSVAPIWDGNETWLILGGGGLLAVFHLASAQSPRQYRDLAVAPRP
                     L"
     gene            complement(324..>1563)
                     /locus_tag="VHN20_06195"
     CDS             complement(324..>1563)
                     /locus_tag="VHN20_06195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012331191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0070069 - cytochrome complex [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0019646 - aerobic electron transport chain
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /protein_id="HEX2725392.1"
                     /translation="SGIVMSYQFGTNWSRYSEFTGNILGPLIAYEVITAFFLEAAFLG
                     IVLFGWEKVGDRLHFFATCMVALGTLFSAFWILSANSWMQTPAGHAIENGIAVPVDWW
                     KIVFNPSFPNRFAHMVMAAYLTTAFAVAGMSAWMLLRGAGQPEQKLAGARLSLSMAMW
                     FAAIFAPVQIVLGDLHGLNVLKEQPTKLAAIEANWETRAGAPLVLFAWPDQTAETNHY
                     ELAIPKLGSYILTHEWGGVVPGLKEVPPQNRPPVWPVFFSFRIMVGIGLLMAALGFWS
                     LWLRWKGGFYENRWFLNACMLMTPSGFGAVLFGWFTAEIGRQPYVVYGLLRTADAVSP
                     VTRGAVATSLIVFIVAYTIIFTAGSYYLAKLLRKGPEPLEEALRGEDFARPDKTARRP
                     LSAPDESLQGRPGRRTQPAG"
BASE COUNT          290 a          505 c          544 g          224 t
ORIGIN      
        1 gaaggggccg aggagcgact gcgaggtctc ggtattgcct tggactttgc gctgaggcga
       61 ggtggaagac cgcgagcagc ccgccgccgc cgaggatcag ccaggtctcg ttgccgtccc
      121 agatcggcgc gacggacagc atcatgcggt cgcgccagtt ctcgtcgcgc gccgcgttga
      181 acaggatgcc gacgccgaga tcgaagccgt ccatgatcac gtacatcgcc acggcgacgg
      241 cgatcagcgc cgcccagatg agcggcagcc agaaggctag gcccgtatat tccgtcccga
      301 aaccgaacat cggcacgcct cccttacccg gccggctgcg tgcggcgccc cggccgccct
      361 tgcaggctct cgtccggcgc cgacagcggc cgccgcgccg tcttgtccgg acgcgcgaaa
      421 tcctctcccc ggagcgcttc ctcgagcggc tccgggcctt tgcgcaggag cttggcgagg
      481 tagtagctgc cggccgtgaa gatgatggtg taggcgacga tgaacacgat cagtgaggtc
      541 gcgacggcgc cgcgcgtgac cggcgacacg gcgtcggcgg tgcgcaggag gccgtagacg
      601 acatagggtt gccggccgat ctcggcggtg aaccagccga acagcacggc accgaagccg
      661 gacggcgtca tcagcatgca ggcattgagg aaccagcggt tctcgtagaa gccccccttc
      721 cagcgcagcc acaggctcca gaagccgagg gccgccatca agagcccgat gccgaccatg
      781 atgcggaagg agaagaacac gggccatacc ggcggccggt tctgcggcgg cacctccttc
      841 aggcccggca ccacgccgcc ccattcgtgc gtgaggatgt agctgccgag cttcgggatg
      901 gcgagctcgt aatggttggt ctcggcggtc tggtcgggcc aggcgaacag gacgagcggt
      961 gcgcccgcgc gcgtctccca gttcgcctcg atcgccgcca gcttggtcgg ctgctccttg
     1021 agcacgttga ggccgtgcag gtcgccgagc acgatctgga cgggcgcgaa gatggccgcg
     1081 aaccacattg ccatcgacag ggacagacgc gcgccggcga gcttctgctc gggctggccg
     1141 gcgccgcgca gcagcatcca ggccgacatg ccggcgaccg cgaaggcggt cgtcagatac
     1201 gccgccatga ccatgtgggc gaagcggttc gggaaggacg ggttgaagac gattttccac
     1261 cagtcgaccg gcacggcgat gccgttctcg atggcatggc cggcgggcgt ctgcatccag
     1321 gaattggccg acaggatcca gaaggcggag aacagcgtgc cgagcgccac catgcaggtg
     1381 gcgaagaaat gcaggcggtc gccgaccttc tcccagccga acagcacgat gccgaggaac
     1441 gccgcctcga gaaagaaggc cgtgatcacc tcataggcga tcagagggcc gagaatgttg
     1501 ccggtgaatt cagagtagcg cgaccagttg gtgccgaact ggtagctcat cacgatgccg
     1561 gag
//
LOCUS       DATAIQ010000365         2345 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_54996, whole genome shotgun sequence.
ACCESSION   DATAIQ010000365 DATAIQ010000000
VERSION     DATAIQ010000365.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2345)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2345)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2345
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_54996"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1671)
                     /locus_tag="VHN20_06200"
     CDS             complement(<1..1671)
                     /locus_tag="VHN20_06200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725393.1"
                     /translation="MSSQGRAGSAAGTKKSPPQAGALPWDRVLPRAQARPETFDAVPA
                     PAGFEQVAAELRPMALDDFDWPDEVYDLYDASEAARLEQRAAREAAEVEPVLTVEEET
                     ATFAAVPAPAPVESAPVAAVAEALTPIAVPAQPSYDFDGVEYELFDPEPDAPPEPEVA
                     LPPMVVELLAVEVKPAAAPPAKPLAPYGIEALDLGEVATPRLSAKLVRRRTAVGPNPN
                     VREQAAPIPDAAVETAAATEPAAETPKPLPTPAPVPPKPVKPVPAGRQQPAPARPAPS
                     VTVKPVPPSEKTVELPPAAAAKAPSQMVEPAMKPAPQTEKRQARPDTPKPAIALGSAL
                     PVDAEPPVAPAKPKVTPIRKAEAAPPVETPITIGLSAQEVGSGFWSGASTGVKGGIAA
                     ALLLVVGGGAYLMFGTGASKPVAAAPTVETAGPVVGGGGWTSSWGTDAAINKNKHISL
                     YRPSMPMSDYRFEFKGQIERKALGWIFRAQDSRNYYVMKLETLQPGPNPVVALVRYPV
                     VNGKEGTHTQVVLPFSVKADTVYDVQLDVSGGTFTTHIQGKLVDHWIDN"
     gene            complement(1953..>2345)
                     /locus_tag="VHN20_06205"
     CDS             complement(1953..>2345)
                     /locus_tag="VHN20_06205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725394.1"
                     /translation="TDFTNTTIVLPGRAVLFAPTSTGTLRFRGSSSGGGGGTSGGAAN
                     AGPDITVVTPEVTLDASASKDPDGGTLTYMWKSIGRSVAISDPTSARPRVQLGEGFGI
                     YRFELTVTTSKGVTSTDIVEVLYVGSPE"
BASE COUNT          354 a          860 c          717 g          414 t
ORIGIN      
        1 gttgtcgatc caatggtcga ccagcttgcc ctggatgtga gtcgtgaacg tgccgccgct
       61 cacgtcaagc tgcacgtcat acacggtgtc cgctttcacg ctgaacggca gcacaacctg
      121 cgtgtgcgtc ccctctttgc cgttcaccac cggatacctg accagcgcta cgaccgggtt
      181 cggcccgggc tgcagcgtct ccagcttcat cacgtagtag ttgcgcgaat cctgcgcgcg
      241 aaagatccag ccgagtgcct tgcgctcgat ctggcctttg aactcgaacc ggtaatcgga
      301 catcggcatc gaagggcgat aaaggctgat gtgcttgttc ttgttgatcg cggcatcggt
      361 gccccagctc gacgtccagc cgccgccacc caccaccgga cccgccgtct cgaccgtcgg
      421 cgccgccgct accggcttgc tcgctcccgt gccgaacatc aggtacgccc cgccgcccac
      481 caccagcaac agcgctgcgg caatcccgcc cttcactccg gtcgacgcgc ccgaccagaa
      541 gccgctccct acttcctgtg ccgacagccc gatcgtgatc ggagtctcga ccggtggcgc
      601 cgcttcggcc ttccggatcg gtgtcacctt cggcttggcc ggcgccaccg gcggctcggc
      661 gtctaccggc agcgcgctgc ccagcgcgat cgcgggcttc ggcgtgtccg gccgcgcctg
      721 ccgcttctcc gtttggggag ccggcttcat cgctggctcg accatctgtg acggagcctt
      781 ggctgccgcc gccggcggaa gctcgaccgt cttctcgctg ggcggaacgg gcttgaccgt
      841 cactgacggc gcaggacgtg ccggcgcagg ctgctggcgt cccgccggta ccggctttac
      901 cggcttcgga ggcacaggag cgggcgttgg cagaggcttc ggtgtttctg ccgccggttc
      961 agtcgctgcc gctgtctcga ccgccgcatc cgggatcggt gccgcctgct cgcggacgtt
     1021 cggattcggt ccgactgccg tgcgcctgcg cactagcttg gcggacagac gtggcgtcgc
     1081 cacttctccc aagtccagcg cttcgattcc ataaggcgcg agcggcttgg ccggaggcgc
     1141 agccgccggc tttacttcga ccgccaacag ctcaaccacc atcggaggca aagccacttc
     1201 aggctctggc ggtgcatccg gctcgggatc gaatagctcg tactcgacgc cgtcaaagtc
     1261 ataggaaggc tgcgccggca ccgcgatcgg tgtcagcgct tccgcgactg ctgccaccgg
     1321 ggcggactcg accggcgcgg gcgcgggcac cgccgcaaac gtcgcggtct cttcctcgac
     1381 cgtcaatacc ggctcgactt cggccgcctc ccgcgcggcc cgctgctcca ggcgcgccgc
     1441 ctcggacgcg tcataaagat cgtagacctc gtccggccag tcgaaatcgt cgagcgccat
     1501 cggacgcagt tccgccgcca cctgctcgaa accggccggt gcgggcacag cgtcgaaagt
     1561 ttccggcctc gcctgcgcgc gcggcagcac gcggtcccac ggcagcgccc ccgcttgcgg
     1621 cggcgacttc tttgtcccgg cggccgaacc ggcccttcct tggctgctca tcgtgcgctc
     1681 acgtagtcac aatcctgccc tgccgcggct gccggacctg ccgggcgccc gcgggaaatc
     1741 agtctaccag atccgtcacc cgtcgaacgg gctgctcgac cttcctcgtg atagtaatcg
     1801 gacacggcga gcgggcgaaa taggaggcaa agaccctaga cgactcgccc gcgcagcgca
     1861 ggatccgtgc tcccgatgcc atagttcgca aacaaaaggg ccggaacgac gccacgttcc
     1921 ggccctttcc caaccctgcg ttcgacccgt gcctattcgg gcgagccgac gtagagtact
     1981 tccactatgt cggtcgacgt cacgcctttc gacgtcgtca ccgtcaattc gaaccggtag
     2041 atgccgaagc cctcgccgag ctgcacgcgc gggcgggccg acgtcggatc cgaaatcgcc
     2101 acgctgcggc caatcgactt ccacatgtag gtcagcgttc cgccgtccgg atcctttgat
     2161 gcggacgcat cgagcgtcac ctcaggcgtc accaccgtga tgtccggtcc cgcattcgcc
     2221 gccccgccgc tcgtgccgcc gccgccgccc gatgagcttc cccggaagcg cagtgtgccc
     2281 gtgctcgtag gtgcgaacag caccgcacgg ccgggcagaa cgatcgttgt attggtgaaa
     2341 tccgt
//
LOCUS       DATAIQ010000366         4087 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_296958, whole genome shotgun sequence.
ACCESSION   DATAIQ010000366 DATAIQ010000000
VERSION     DATAIQ010000366.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4087)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4087)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4087
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_296958"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1168
                     /locus_tag="VHN20_06210"
     CDS             <1..1168
                     /locus_tag="VHN20_06210"
                     /inference="COORDINATES: protein motif:HMM:NF024938.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="acetate--CoA ligase family protein"
                     /protein_id="HEX2725395.1"
                     /translation="AHGIELAKLAPDTESKLRAVLGEDADIGNPLDTKRTLPTQQYMG
                     CVETLCAAPEIDLLLLAEELPREAGVARKVANFTALETWIGRAGKPVAMFSPITFRET
                     DYMIGLRDQLAHVPLMRDIGKTFRAIAALTKAGSGKPEPAEAAARPAPPALALDCRRR
                     AAALAGRTGLSEVESKALLRAYGIPLPPEEIASSAGEAAMAAARIGFPVVLKAVSAEV
                     PHKSDAGLVILNLANADDVRTAAERLRRRCGELGAAFEGLLVARQMSGGVEAVLGIHR
                     DPEMGPVVMVGMGGVWLELFKDVAFAPPALNRERALAAIAGTRMARLLEGYRGGRGGD
                     VDALADAMVSLGRLALDLGDVVEAVDVNPLLVMETGVCALDGLVVLQPPAGGPI"
     gene            1206..2213
                     /locus_tag="VHN20_06215"
     CDS             1206..2213
                     /locus_tag="VHN20_06215"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEX2725396.1"
                     /translation="MFASVLLALGAGPASADSVADFYRGKTITCYIGYEAGGGYDLYA
                     RTISKHISKHIPGNPTVTPVNKPGASSMVLANFLAKVAPRDGTAIGAVNSALLFDPLF
                     SGPDSKAQFTGPDMTTVGNAVSSASVLISWKTSGVTSFEELKQKELLIGATSRTGDTY
                     LMPWAVRKVLGVNLRIITGYPGTREAALALERGEISGRVWDMEGIKSARPQWLTDGSI
                     NLLAQLAPQKMPEVPANVPLVKDFVTNEDDRRVLDVIFLSTTLARPYIAPPGVPAERV
                     KALRDAFMATMKDPEFLADMDRNKLAVGPTSGEDMEKAVRDAYALPDAIIQKVRRTLA
                     D"
     gene            complement(2454..2690)
                     /locus_tag="VHN20_06220"
     CDS             complement(2454..2690)
                     /locus_tag="VHN20_06220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725397.1"
                     /translation="MTDEQFKLLVTACRYGGTLWMSRGDGRSHTRQVLDALVSAGLLA
                     PPVADTTQGNLKWAVTDEGRAAAMARAKSPGAAA"
     gene            complement(2727..3107)
                     /locus_tag="VHN20_06225"
     CDS             complement(2727..3107)
                     /locus_tag="VHN20_06225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019963146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX2725398.1"
                     /translation="MSLDFTIPVLVVDDYQTMIRIVRNLLKQIGFEDVDDASDGTSAL
                     AKLKEKRYGLIISDWNMEPMTGYELLRHVRADDRLRDTPFIMVTAESKVENVVAAKKA
                     GVDNYIVKPFSADVLKSKIQAVLA"
     gene            3397..4023
                     /locus_tag="VHN20_06230"
     CDS             3397..4023
                     /locus_tag="VHN20_06230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018428008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarC family protein"
                     /protein_id="HEX2725399.1"
                     /translation="MTSDFFFSALVTLLVTIDPVGLAPIFVAVTVGMRPEDRKRVALR
                     ATVIAVGILTFFAVFGEALLEFLRIGLPAFRIAGGLLLFWISFEMVFERRTDRKQHTA
                     EAAITIDHVRHIAAFPLAIPLMAGPGAITAVILLSARTAGNVVATAALLALVGTVMLG
                     CLAVFLLAGRISALLGTTGNVLLSRLLGVILAALAVQFVIDGITEVSR"
BASE COUNT          666 a         1379 c         1358 g          684 t
ORIGIN      
        1 ggcgcacggg atcgagctcg cgaagctcgc gccggatacc gagagcaagc tgcgcgccgt
       61 gctgggtgag gacgccgata tcggcaatcc gctcgacacc aagcggacct tgccgacgca
      121 gcaatatatg ggctgcgtcg agacgctgtg cgcagccccc gagatcgacc tgctgctgct
      181 ggccgaggag ctgccgcgcg aggccggcgt cgcgcgcaag gtggcaaact tcaccgcgct
      241 cgagacctgg atcgggcgcg ccggaaagcc ggtggcgatg ttctcgccga tcacgttccg
      301 cgagaccgac tacatgatcg gcctgcgcga ccagctcgcg cacgtgcccc tgatgcgcga
      361 catcggcaag acgtttcgcg ccatcgcggc gctgaccaaa gcaggctcgg gcaagccgga
      421 gccggccgag gccgcggcgc gcccggcgcc gcctgcgctc gccctcgact gtcgccggcg
      481 cgccgcggcc ctcgccgggc gcacgggcct gagcgaggtc gaatcgaagg cactgctccg
      541 cgcctacggc atcccgcttc cgcccgagga gatcgcctcg tccgccgggg aggccgccat
      601 ggcggcggcc aggatcggct ttcccgtcgt gctcaaggca gtgtcggcgg aggtgccgca
      661 caagagcgac gccggccttg tgatcctgaa cctcgcgaat gccgatgacg tgcgcaccgc
      721 ggccgagcgc ctgaggcggc gctgcggcga gctcggcgcg gccttcgaag gcctgctggt
      781 cgccaggcag atgagcggcg gcgtcgaggc ggtcctcggc atccaccgcg atccggagat
      841 gggcccggtg gtgatggtcg gcatgggggg cgtgtggctc gagctgttca aggacgtcgc
      901 cttcgcgcct ccggcattga accgggagcg ggcgcttgcg gccatcgccg ggacgcgcat
      961 ggcccgcctc ctggaaggct acaggggagg gcgcggcggc gatgtcgacg cgctcgccga
     1021 tgccatggtg tccctgggac gtctggcgct cgatctcggc gacgtcgtcg aagcggtcga
     1081 cgtcaatcct ttgctggtca tggaaacggg cgtgtgcgcc ctcgatggcc tggtggtgct
     1141 ccagccgccc gcgggcggcc caatctgaca agggaaggaa agcaatgctg cgtctgcgat
     1201 tggcaatgtt cgcgtccgtc cttctggcgc tcggcgcggg acctgcatcg gcggattccg
     1261 tcgccgattt ctaccggggc aaaaccatca cctgctacat cggctacgaa gccggtggcg
     1321 gctacgatct ctacgcgcgc accatcagca agcacatatc caagcatata ccgggcaacc
     1381 cgaccgtgac gcccgtcaac aagcccggcg ccagcagcat ggtcctggcc aatttcctgg
     1441 ccaaggtcgc gccgcgtgac ggcaccgcca tcggcgcggt gaattccgca ctgctgttcg
     1501 acccgctgtt ctccggcccg gactcgaagg cgcagttcac gggcccggac atgacgaccg
     1561 tcggcaacgc cgtcagctcg gcatccgtgc tcatttcatg gaagacgagc ggcgttacct
     1621 cgttcgagga actcaagcaa aaggaactcc tgatcggcgc aacgtcgcgc acgggcgata
     1681 cctacctgat gccgtgggcc gtcaggaagg tgctgggcgt caacctcagg atcatcaccg
     1741 gctatccggg cacgcgcgag gccgcgctcg ccctcgagcg cggcgagatc tcggggcgcg
     1801 tgtgggacat ggaaggcatc aagagcgccc ggccgcaatg gctcacggac ggatcgatca
     1861 accttctcgc gcagctggcg ccgcagaaga tgccggaggt gcccgcgaac gtgccgctcg
     1921 tgaaggactt cgtgaccaac gaggacgaca ggcgcgtgct cgacgtgatc ttcctcagca
     1981 ccaccctggc gcgaccctat atcgcgccgc ccggcgtgcc ggcggagcgc gtcaaagccc
     2041 tgcgcgacgc cttcatggcg accatgaagg accccgaatt cctggccgac atggacagga
     2101 acaagctcgc ggtcggtccg acgtcgggag aggacatgga gaaggcggtg cgggacgcct
     2161 atgcgctgcc cgacgccatc atccagaagg ttcgcaggac gctcgccgac taaagcatga
     2221 tccggcgaaa gcctgccccc ggacttgatc cgggggcggc accacttcgc cgaaaagatc
     2281 atgcgactcg atgagaagcg gagcgtgatc gatccagcct gaaccgacca cggtccattc
     2341 ctctttgcgc cgcatgagcc cggcaagtcc gggacaagcc ttagtcggca aaatggtggt
     2401 cgccccggac ctcatccgag gcgggcgcca caaaggtggc gcccgcaaac gcctcacgcg
     2461 gccgccccag gagacttcgc ccgcgccatc gccgcggccc ggccctcgtc ggtcacggcc
     2521 catttcaggt tgccctgggt cgtgtcggcg accggcggcg caagcaatcc tgccgatacg
     2581 agggcgtcga gaacctgccg cgtgtgtgaa cggccgtcgc ccctggacat ccacagggtc
     2641 ccgccatacc ggcacgccgt caccaggagc ttgaactgtt cgtccgtcat gctcgcctca
     2701 caagccgcgg agccgggccc gtttcatcat gcgaggacgg cctggatctt gctcttgagc
     2761 acgtcggcgc tgaacggctt gacgatgtag ttgtcgacgc ccgccttctt ggccgcgacc
     2821 acgttctcga ctttcgattc cgccgtgacc atgatgaagg gcgtgtcgcg cagacggtcg
     2881 tcggcgcgga cgtggcgaag gagctcgtag cccgtcatgg gctccatgtt ccagtccgag
     2941 atgatgaggc cgtatctctt ctctttcagc ttggcgagcg cgctggtgcc gtcggaggcg
     3001 tcgtcgacgt cctcgaagcc gatctgcttc agaaggttgc gcacgatgcg gatcatcgtc
     3061 tggtaatcgt cgacgacgag aacggggatc gtaaaatcga ggctcacgcg tagtcctttg
     3121 tcagtccaag agtgtcgatc ggagatcgca cactgatctc gcccgaagtc cggatgcagg
     3181 cggccggagg ccgcccgctt cgacgccgcg ctcgaggcaa gccgctttca accctcgacg
     3241 aggcgcgggc gcgatcatct ggttgaaaca ataaccaggt gttacgggag attgcggcgc
     3301 cggcccgccc gctcgtggct ggacaaaaag tgatctccgg cgtcgcggct cggcgcgccg
     3361 aagcgcaaat cttggtcagg tccgagggcg acgccgatga cgtcagactt cttcttctcc
     3421 gccctcgtga cgctgctcgt caccatcgat cccgtgggcc tggcgccgat cttcgtggcc
     3481 gtcacagtcg ggatgcggcc cgaggaccgc aagcgcgtgg ccctgcgtgc caccgtgatc
     3541 gccgtcggaa tcctgacctt tttcgccgtg ttcggcgagg cgcttctgga gtttctgcgc
     3601 atcggcctgc cggcgttccg gatcgccggc gggctcctgc tgttctggat ctcgttcgag
     3661 atggtgttcg agcggcgcac cgaccgcaag cagcacacgg ccgaggccgc catcaccatc
     3721 gatcacgtcc gccacatcgc cgcgttcccg ctggcgatcc cgctgatggc cggacccggg
     3781 gcgatcacgg cggtcatcct gctgtcggcc cgaaccgccg gcaatgtcgt ggcgaccgcc
     3841 gccctcctcg cgctggtcgg aaccgtgatg ttgggctgcc ttgccgtgtt cctgctggcc
     3901 gggcgcatct ccgccctcct tggaacgacc gggaacgtgc tgctgtcgcg cctgctcggc
     3961 gtcatcctcg ccgcgctcgc cgtgcagttc gtgatcgacg gcatcaccga ggtgagccgc
     4021 tgaacatgcc ccgctctagg tcataaactc ataattgggg tttcagtttt tggcgaacag
     4081 tgattca
//
LOCUS       DATAIQ010000367         1557 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_388689, whole genome shotgun sequence.
ACCESSION   DATAIQ010000367 DATAIQ010000000
VERSION     DATAIQ010000367.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1557)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1557)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1557
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_388689"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1557)
                     /locus_tag="VHN20_06235"
     CDS             complement(<1..>1557)
                     /locus_tag="VHN20_06235"
                     /inference="COORDINATES: protein motif:HMM:NF020137.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M10 family metallopeptidase"
                     /protein_id="HEX2725400.1"
                     /translation="NIDALLSGRMWSGALTYAFPDMAGDFEAGNLEVGLGFVPASLNQ
                     MQAARYLLEGFSPYAGGPRMGLTAVEQFTNLSISDAGFDGADIRISRSPGANPTAYAY
                     YPDAAPFGGDVWFGTRYNYGDPRLGTYSYQTMAHELGHALGLKHGHVGGGVANVALSP
                     DRDTLEFSVMTYKSYVGHPMDGYSNETYGYPQTYMMYDIAALQAMYGANFGANSGNTV
                     YRWDAKTGETFVNGVGQGAPGTGLGGYSNRVFLTIWDGGGIDTYDFSNSTDDASIDLT
                     PGSWSAFSNAQRAYLGMGNYARGNVFNALQYQDDPRSLIENATGGSGSDTIRGNAAAN
                     TLVGQRGNDTLFGHDGDDRLSGGIGSDILYAGAGADLVDGGDGFDYAGYDEANHAGFT
                     ASLLYAGWNTGVAAGDIYVGIEGLILGSGDDVGYGTAADNYLYGRAGSDTLFALGGQD
                     SLFGEDGNDNLIGGEGHDHLFGGLGGDLLQGQAGFDYARYDDASYAGFVVSLTSQSLN
                     TGVAAGDVLIG"
BASE COUNT          256 a          500 c          531 g          270 t
ORIGIN      
        1 cccaatgagg acgtcaccgg cggcgacccc ggtgttcaac gactggctcg tcagcgagac
       61 cacgaacccg gcgtagctcg cgtcgtcgta gcgggcgtaa tcgaagccgg cctggccctg
      121 caggagatcg ccgccgagcc cgccgaacag gtggtcgtgg ccttcgcctc cgatcaggtt
      181 gtcgttgcca tcctccccga acagggaatc ctggccgccg agggcgaaca acgtgtcgct
      241 cccggcccga ccgtagaggt aattgtccgc tgccgtgccg tagccgacat cgtcgccgct
      301 accgaggatg agcccttcga tgccgacgta tatgtcgccg gccgccactc ccgtgttcca
      361 gccggcatac aggagcgatg ccgtgaagcc cgcgtggttc gcctcgtcat agccggcata
      421 gtcgaagccg tcgccgccgt cgacgaggtc ggcgcccgcg ccggcataga gaatgtccga
      481 cccgatgccg ccgcttagcc tgtcgtcacc gtcgtgcccg aacagcgtgt cgttgccgcg
      541 ttgaccgaca agcgtgttcg cagccgcgtt gccccggatc gtgtcgctgc ccgagccgcc
      601 cgtcgcattc tcgatcagcg agcgcggatc gtcctggtat tgcagcgcgt tgaagacgtt
      661 gccgcgggca taattgccca tgccgagata ggcgcgttgg gcgttggaga atgccgacca
      721 gctgcccggg gtcaggtcga tggaagcgtc gtccgtggag ttggagaagt cgtaggtgtc
      781 gatgccgccg ccgtcccaga tcgtcaggaa cacgcgattg gaatagccgc cgaggcccgt
      841 gcccggcgcg ccctggccga cgccgttgac gaaggtttcg ccggtcttcg catcccagcg
      901 gtagaccgtg ttgccactgt tggcgccgaa gttggcgcca tacatcgcct gcagggcggc
      961 gatgtcgtac atcatgtagg tctgcggata gccgtaggtc tcgttgctgt agccatccat
     1021 cgggtgaccc acatacgact tgtaggtcat gaccgagaac tcgagcgtgt cccggtccgg
     1081 cgagagcgcg acgttggcga cgccgccgcc cacgtgcccg tgcttgaggc cgagcgcgtg
     1141 gccgagctcg tgggccatgg tctggtaaga ataggtgccg agcctgggat cgccgtagtt
     1201 gtagcgcgtc ccgaaccaga catcgccgcc gaacggcgcc gcatcggggt aataggcgta
     1261 ggcggttgga ttggcccccg gggacctgct gatgcggata tcggcgccgt cgaagccggc
     1321 gtccgagatc gacaggttcg tgaactgctc gacggcggtt aggcccatgc gcggcccgcc
     1381 ggcataaggg ctgaagcctt ccaggaggta gcgcgccgcc tgcatctgat tgagggaggc
     1441 tgggacaaag ccaaggccga cctccaggtt gccggcctcg aagtcgcccg ccatgtcggg
     1501 gaaggcgtag gtgagggcgc cgctccacat gcggccggac agaagcgcat cgatatt
//
LOCUS       DATAIQ010000368         1940 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_296995, whole genome shotgun sequence.
ACCESSION   DATAIQ010000368 DATAIQ010000000
VERSION     DATAIQ010000368.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1940)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1940)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1940
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_296995"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..532
                     /locus_tag="VHN20_06240"
     CDS             <1..532
                     /locus_tag="VHN20_06240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="EF-Tu/IF-2/RF-3 family GTPase"
                     /protein_id="HEX2725401.1"
                     /translation="EEVSARVIHSGVGGITESDITLAEASGAAVIGFNVRAHKEAREA
                     ADRAGVEIRYYNIIYNLVDDVKEAMSGLLAPTLREERLGEAQVLEVFNVSKVGKVAGC
                     RVLDGRVERGANVRLIRDNVVIHEGKLSQLKRFKDDAREVVAGQECGMAFENYQDIRA
                     GDVVECYRVEEVRRTL"
     gene            678..1094
                     /gene="rbfA"
                     /locus_tag="VHN20_06245"
     CDS             678..1094
                     /gene="rbfA"
                     /locus_tag="VHN20_06245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HEX2725402.1"
                     /translation="MPKRFEATSGPSQRQQRVAELVRHALAEVLQRGDIQDEVLASHV
                     VTIPEVRMSPDLKLATAYVMPLGGRDEKAVLQALDRNRKALRTEVAHRVNLKFAPDLR
                     FLRDETFDEAARIEALLRSDKVQQDIRIADDESGEE"
     gene            1125..>1940
                     /gene="truB"
                     /locus_tag="VHN20_06250"
     CDS             1125..>1940
                     /gene="truB"
                     /locus_tag="VHN20_06250"
                     /EC_number="5.4.99.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010687053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004730 - pseudouridylate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HEX2725403.1"
                     /translation="MPPRREPRPQERPKKRDVHGWIVLDKPVGMTSTHAVAVVKRALN
                     AKKAGHAGTLDPLASGILPIALGEATKTVPFVMEGRKSYVFTVAWGVETDTDDAEGRP
                     VTATNVVPDRAAVEAQLPRFTGLIEQIPPRFSAIKIKGERAYDLARDGEAVDLQPRPA
                     QIDRLQVIAHSGERSVLEADCGKGTYVRALARDIGRAIGCLGHVAALRRTRVGPFNEA
                     EAVLVGDIERAREASPEALADVLRPVETALADVPVVAISRDAAARLMRGQSVIL"
BASE COUNT          339 a          668 c          660 g          273 t
ORIGIN      
        1 cgaggaggtc tcggcccggg tcatccactc aggcgtcggc ggcatcaccg agtccgacat
       61 cacgctcgcg gaggcctccg gcgccgccgt catcggcttc aacgtgcgcg cccacaagga
      121 agcgcgcgag gcggccgacc gtgccggcgt cgagatccgc tactacaaca tcatctacaa
      181 cctcgtggat gacgtgaagg aagcgatgtc gggcctgctc gccccgacgc tccgcgagga
      241 gcggctcggc gaggcgcagg tgctcgaggt gttcaacgtc tcgaaggtcg gcaaggtcgc
      301 gggctgccgc gtcctcgacg gcagggtcga gcgcggcgcc aatgtccgcc tgatccgcga
      361 caatgtcgtg atccacgaag gcaagctcag ccagctcaag cgcttcaagg acgacgcgcg
      421 cgaggtggtg gccggccagg aatgcggcat ggcattcgag aactaccagg acatccgcgc
      481 cggcgacgtt gtcgaatgct accgcgtcga agaggtcagg cgtaccctgt aaagcagttc
      541 cagcgtcatt ccgggcggcg tgaagcgtgc gcccggaacc tgcgcctggg tgacccgttc
      601 agctgaacac ggtttccgga cttctgccgt cggcatgctc cggagtgaac gatccggtcc
      661 gatcccggag aaaatgaatg cccaaacgtt ttgaagcgac ctcgggtccc tcgcagcgcc
      721 agcagcgcgt ggccgagctc gtgcgccacg cgctcgccga ggttctgcag cgcggcgaca
      781 tccaggacga ggtgctggca agccatgtgg tcaccatccc ggaggtgcgc atgtccccgg
      841 acctcaagct cgccaccgcc tacgtgatgc cgctcggagg ccgcgacgag aaggcggtgc
      901 tgcaggcgct tgaccgcaac aggaaggcgt tgcgcaccga ggtcgcgcat cgcgtgaacc
      961 tcaaattcgc acccgatcta cgcttcctgc gcgacgagac cttcgacgag gcagcgcgta
     1021 tcgaagccct gttgcgcagc gacaaggttc agcaggacat ccgaatcgcc gacgacgaat
     1081 cgggcgagga gtaacgcgtg gacaacccgg caacgccgcc gacaatgccg ccacggcgcg
     1141 agccgcgccc gcaggagcgc ccgaaaaagc gggacgtgca tggctggatc gtgctcgaca
     1201 agccggtcgg catgacctcg acccatgcgg tcgcggtggt gaagcgggcg ctcaacgcca
     1261 agaaggcagg gcatgccggc accctcgatc cgctcgcctc cggcatcctg ccgatcgcgc
     1321 tcggcgaagc caccaagacc gtgcccttcg tcatggaagg ccgcaaatcc tacgtcttca
     1381 ccgttgcctg gggcgtggag acggacacgg acgatgccga aggccgcccc gtcaccgcga
     1441 ccaacgtcgt cccggaccgg gccgcggtcg aagcccagct gccgcgcttc accggcctga
     1501 tcgagcagat ccctccgcgc ttctcggcga tcaagatcaa aggcgagcgt gcctacgacc
     1561 tcgcccgtga cggcgaggcc gtcgatctgc agccgcgccc ggcgcagatc gatcggctcc
     1621 aggtgatcgc ccatagcggc gagcgcagcg tgctcgaagc cgattgcggc aagggcacgt
     1681 atgtgcgcgc cctggcgcgc gacatcggcc gggccatcgg ctgcctcggg cacgtggcag
     1741 cgctgcggcg cacgcgcgtc ggcccgttca acgaagccga ggccgtgctg gtcggcgaca
     1801 tcgagcgggc gcgcgaggcc tcgccggagg cgctggccga cgtgctgcgc ccggtggaaa
     1861 cggccctggc cgacgtccct gtggtggcca tctcgcgcga cgccgcggcg cggctcatgc
     1921 gcgggcagtc cgtcatcctg
//
LOCUS       DATAIQ010000369         1762 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_112094, whole genome shotgun sequence.
ACCESSION   DATAIQ010000369 DATAIQ010000000
VERSION     DATAIQ010000369.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1762)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1762)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1762
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_112094"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            167..>1762
                     /gene="oxc"
                     /locus_tag="VHN20_06255"
     CDS             167..>1762
                     /gene="oxc"
                     /locus_tag="VHN20_06255"
                     /EC_number="4.1.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020173438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008949 - oxalyl-CoA decarboxylase
                     activity [Evidence IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_process: GO:0033611 - oxalate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxalyl-CoA decarboxylase"
                     /protein_id="HEX2725404.1"
                     /translation="MAQTALKDSPADTGAAPELTDGFHLVLDALKLNGINTIYDVPGI
                     PISDLLRLAQAEGMRVISFRHEQNAGNAAAIAGFLTKKPGVCVTVSAPGFLNGLTALA
                     NATTNCWPMLLISGSSEREIVDLQQGDYEEMDQLAIAKPLCKAAFRVLHAQDIGIGIA
                     RAIRAACSGRPGGVYLDLPAKLFGQVIDAAAGQKSLVKVVDPAPAQIPAPSAVKRALE
                     VLKGAKRPLIILGKGAAYAQADDEIRTFVEKSGIPFLPMSMAKGLLPDTHAQSAGAAR
                     STVLKDSDVVLLVGARLNWLLSHGKGKQWGEPGSKKFIQIDIEPKEMDSNVAIVAPLV
                     GDIGSCVSALLDGMGANWPAPPADWVDAIKAKKEENIGKMAARLKKNSTPMDFHSALS
                     ALRDVIKERPDAMLVNEGANTLDLARGVIDMYKPRKRLDVGTWGVMGIGMGFAVAAAV
                     ETGKPVLAVEGDSAFGFSGMEVETICRYNLPVCVVVFNNNGIYRGTDTDPTGRDPGTT
                     VFVKDSRYDKMMEAFGGVGVNVTT"
BASE COUNT          315 a          624 c          571 g          252 t
ORIGIN      
        1 cctgctgctg cacgtcaagg cgatccgcca ccgcacgatc ttcgagagcg accgcgccga
       61 gcgcctcgtg cgcgatcata cgctgcggct cgcggcgcat gtcgaacagc acgtcgatct
      121 cgactagaac cccacacgca acaagcctct gggaggagga aaccccatgg cacagaccgc
      181 attgaaggac agtcccgcgg ataccggcgc agcgccggag ctgaccgacg gcttccacct
      241 cgtcctcgac gcgctcaagc tcaacggcat caacaccatc tacgacgtgc ccggcatccc
      301 gatctcggac ctgctgcgcc tggcgcaggc cgaaggcatg cgcgtgatct cgtttcggca
      361 cgagcagaat gccggcaacg ccgccgccat cgccggcttc ctgaccaaga agccgggcgt
      421 gtgcgtgacg gtctcggcgc cgggcttcct caacggcctg acggccctcg ccaacgcgac
      481 caccaattgc tggccgatgc tcctgatcag cggctcgtcg gaacgcgaga tcgtcgacct
      541 gcagcagggc gactacgagg agatggacca gctcgccatc gccaagccgc tgtgcaaggc
      601 ggcgttccgc gtgctgcacg cgcaggacat cggcatcggc atcgcgcgcg ccatccgcgc
      661 cgcctgctcg ggccgtcccg gcggcgtcta tctcgacctg ccggcgaagc tgttcggcca
      721 ggtcatcgac gcggccgccg gccagaagtc gctcgtcaag gtggtcgacc cggcgccggc
      781 gcagatcccg gcgccgtccg ccgtcaagcg cgccctcgag gtgctgaagg gcgccaagcg
      841 cccgctcatc atcctcggca agggcgccgc ctacgcgcag gccgacgacg agatccgcac
      901 cttcgtcgag aagagcggca ttcccttcct gccgatgagc atggccaagg gcctcctgcc
      961 cgacacgcat gcgcaatcgg ccggcgccgc gcgctcgact gtgctcaagg attccgacgt
     1021 cgtgctgctg gtcggcgccc gcctcaactg gctgctctcg cacggcaagg gcaagcaatg
     1081 gggcgagccc ggctcgaaga agttcatcca gatcgacatc gagccgaagg agatggacag
     1141 caacgtcgcc atcgtggcgc cgctggtcgg cgacatcggc tcctgcgtct ccgcgctgct
     1201 cgacggcatg ggcgccaact ggccggcgcc gccggccgac tgggtcgacg ccatcaaggc
     1261 taagaaggaa gagaatatcg gcaagatggc ggcgcggctc aagaagaact cgacgccgat
     1321 ggatttccac agcgcgctca gcgcgctgcg tgacgtgatc aaggagcgtc cggacgcgat
     1381 gctcgtcaac gaaggtgcca acacgctcga tctcgcgcgc ggcgtcatcg acatgtacaa
     1441 gccgcgcaag cgcctcgacg tcggcacctg gggcgtgatg ggcatcggca tgggcttcgc
     1501 cgtcgccgcc gccgtcgaga ccggcaagcc ggtgctcgcg gtcgagggcg acagcgcctt
     1561 cggcttctcc ggcatggagg tggagacgat ctgccgctac aacctgccgg tctgcgtggt
     1621 cgtgttcaac aacaacggca tctaccgcgg caccgacacc gacccgaccg gccgcgatcc
     1681 gggcaccacg gtgttcgtga aggacagccg ctacgacaag atgatggagg ccttcggcgg
     1741 cgtcggcgtg aacgtcacca cg
//
LOCUS       DATAIQ010000370         1879 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_19832, whole genome shotgun sequence.
ACCESSION   DATAIQ010000370 DATAIQ010000000
VERSION     DATAIQ010000370.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1879)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1879)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1879
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_19832"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..909)
                     /locus_tag="VHN20_06260"
     CDS             complement(<1..909)
                     /locus_tag="VHN20_06260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent cysteine synthase family protein"
                     /protein_id="HEX2725405.1"
                     /translation="MMEHRDWVAHAVQVIEADFNRSADTHLLRVPLPALPDIALYLKD
                     ESTHPTGSLKHRLARSLFLYGLCNGWVGPSTTIVEASSGSTAVSEAYFARLLGLRFIA
                     IMPRSTSAEKVAQISFYGGESHFVEHPGEIYEASARLAAELDGHYMDQFTYAERATDW
                     RGNNNIAESIFGQMGQEKHPVPAWLVVGAGTGGTSATPGRYIRYRQLPTRLCLADPEG
                     SVFHRHVADRGICTVSGPSSLIEGIGRSRCEPSFNPDLIDRAYAVSDAASIAAARVLS
                     RRIGRSCGGSTGTNMWAVAHLVAAMTD"
     gene            complement(993..1817)
                     /locus_tag="VHN20_06265"
     CDS             complement(993..1817)
                     /locus_tag="VHN20_06265"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018318632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX2725406.1"
                     /translation="MRLAPHHARDPATRAALWLAAGLVLAFMMVPILAIVPLSFNDGQ
                     FLVYPLRGLSLRWYETFFTDGRWLAALRNSMVIGFAATLVATPLGVLAAFGLALADFP
                     GRRLANAIILTPIIVPVVIYAVGLYFVFSPLGLTATFTGLILAHAALGAPFVVVTVGA
                     SLANFDWNLLRAAASLGAGPLTAARRVLLPQIAPGVLFGALLAFATSLEEVVVVLIVG
                     GPAQRTLPREMFVQLREHISPTLAAAAALLMLISAVLLLAVELLRRRGERMRLQGR"
BASE COUNT          348 a          612 c          673 g          246 t
ORIGIN      
        1 atccgtcatt gccgcgacga ggtgggccac cgcccacatg ttggtgccgg tcgatccgcc
       61 acaggaacgg ccgatgcgcc gcgacagcac gcgggcggcg gcgatgcttg ccgcgtccga
      121 gaccgcgtag gcacggtcga tcaggtccgg gttgaacgag ggctcgcatc gcgaccgtcc
      181 gatgccctcg atcagcgacg atgggccgga caccgtgcag atgccgcgat cggcgacgtg
      241 gcgatggaag accgagccct cagggtcagc gaggcacaag cgggtgggca gctgacgata
      301 acggatatag cgccccggcg tcgccgacgt gccgccagtt ccggcgccca cgacgagcca
      361 ggccgggacc ggatgcttct cctgccccat ctggccgaag atcgactcgg cgatgttgtt
      421 gttgccgcgc cagtcggtgg cgcgctccgc ataggtgaac tggtccatgt aatggccgtc
      481 gagttccgca gccagccgtg cgctcgcctc gtagatctcg cccggatgct cgacgaagtg
      541 gctctccccg ccatagaagc tgatttgcgc gaccttctcg gccgaggtcg agcgcggcat
      601 gatggcgatg aagcgcaagc cgagcagacg ggcgaaatag gcttcggaaa cggcggtcga
      661 gccgctcgat gcttccacga tcgtggtgct cggcccgacc cagccgttgc acagtccgta
      721 gaggaagagc gagcgcgcca ggcggtgctt gaggctcccc gttggatgcg tggattcgtc
      781 cttcagataa agagcgatgt cgggaagagc cggcaacggc acgcgcagga gatgggtgtc
      841 ggcagatcga ttgaagtcgg cctctatgac ctgaacggca tgcgccaccc agtcgcgatg
      901 ttccatcatt cccgcactcc accgtacccg cgggcccttc gctgacattc ataacagatg
      961 cttggccggc gattccggac cgatccgcgt gatcaccggc cctgcaaccg catgcgctcg
     1021 ccccgccggc gcagcagctc gacggcgagc aacagcactg ccgagatcag catgagcagg
     1081 gcggcggccg cggccagcgt cggggagatg tgctcgcgca gctgcacgaa catctcgcgc
     1141 ggcagcgtgc gctgggccgg gccgccgacg atcaggacca cgaccacctc ctcgagcgac
     1201 gtggcgaagg cgagcagcgc cccgaacagg acgccgggcg cgatctgcgg cagcagcacg
     1261 cgccgcgcgg cggtgagcgg cccggcgccg aggctggccg cggcgcgcaa gaggttccag
     1321 tcgaaattgg ccagggaggc gcccacggtc acgaccacga acggtgcgcc gagggccgca
     1381 tgcgcaagga tcagtcccgt gaatgtggcc gtgagcccga gcggcgagaa cacgaaatac
     1441 aggccgaccg cgtagatcac gaccggcacg atgatcggcg tgaggatgat cgcgttcgcg
     1501 agccgccggc cggggaaatc ggcgagcgct agcccgaagg cggcgagcac gccgagcggg
     1561 gtcgcgacca gcgtcgccgc aaagccgatc accatgctgt tgcgcaaggc ggcgagccag
     1621 cgcccgtcgg tgaagaaggt ttcgtaccag cgcagcgaca gcccgcgcag gggatacacc
     1681 aggaactggc cgtcgttgaa cgagagcggc acgatggcga ggatcggcac catcatgaag
     1741 gcgagcacga ggccggcggc aagccacaag gcggcgcggg tcgcggggtc gcgcgcgtgg
     1801 tgtggcgcga gcctcatccg agcacgccga ggcggtagcg cccgccgaga cgggtcgcga
     1861 gcgcaaacag cacgaaggt
//
LOCUS       DATAIQ010000371         2419 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_388941, whole genome shotgun sequence.
ACCESSION   DATAIQ010000371 DATAIQ010000000
VERSION     DATAIQ010000371.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2419)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2419)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2419
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_388941"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..264)
                     /locus_tag="VHN20_06270"
     CDS             complement(<1..264)
                     /locus_tag="VHN20_06270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725407.1"
                     /translation="MALLAALGVGASRPVQAEDSGFWDTVRSSAGFGGAPRASAWFPR
                     PGYERRGFSHRRAARVKEQRVRAAEPTSPKFADPAKRPNPLVTL"
     gene            complement(516..1313)
                     /locus_tag="VHN20_06275"
     CDS             complement(516..1313)
                     /locus_tag="VHN20_06275"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX2725408.1"
                     /translation="MRERVRANGITFNVAIQGRDGAPWLTFSNSHATDLSLWDEQAAR
                     LADRFRVLRYDTRGHGGTDASEGAYDFALLSGDVVALWDTLGIARSHYVGLSLGGTTG
                     IEIALRHPGRVTSLAACDCRCNAPPEFAASWDPRIATARRDGMDALVEPTLQRWFTPA
                     FRAAKPPELTKVAQMIRGTSVAGYVGCAEALKRIDCEPRLGGVGCPTLFLTGEKDPSA
                     PPELAGRWRAAVKDARFVVVSEAAHITNIENPAQFNAALEGFLADVG"
     gene            complement(1332..2375)
                     /locus_tag="VHN20_06280"
     CDS             complement(1332..2375)
                     /locus_tag="VHN20_06280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725409.1"
                     /translation="MSRNRGLAAFLVDGGVAAAVSTGAAAQEDPARFFTGKTVDFIIG
                     SAPGGGYGTYAMVLNRHIGKHLPGSPKVVGRNLPGAGSLVAANLLYNKSPRDGSAFGA
                     LFMGAVMEPLIGDAAQTHFDPRQFHFIGSANRETSICVAWHTSPVKSFTDVFDKQLIV
                     GSSGGTSSIEQYPTVLNNVLGTKFKVIGGYPGSQQAALAMEKGETDGICGIQWTSFIT
                     SFQHWLDNKQVRIIAQISSPEGDPKLNAMGIPKIWDFVKRDEDKKVLGVIFSQLAFGR
                     PYVLPPGVPAERVEAYRKAFDATMKDPEFLAEAAKTKLNVDPLPGAEVQKIVNEIYAT
                     PPELVERAKAVLK"
BASE COUNT          373 a          825 c          820 g          401 t
ORIGIN      
        1 cagggtcacc agggggttcg gccgcttggc gggatcggca aatttgggac tggtcggctc
       61 ggcagctcgg acccgctgct ccttcacgcg ggcggcgcgc cgatgggaga aaccacgccg
      121 ttcgtaaccc gggcgcggga accacgccga cgcgcgcgga gcaccgccga agcccgccga
      181 cgaccgcacc gtgtcccaaa aaccgctgtc ctcggcctgc accggccgcg atgcgccgac
      241 cccaagggcg gcaagcaacg ccaccagtcc caaaacctgg gttgcgcgac ctgatctgcc
      301 tgtcgaagtc atggaagctg cccgcattgc ctgagccaac ggcatgcacc gtcccgcggt
      361 tccatgcgcg cggcgaacca cggcgcccgc ccgggcggga tcgcttcagt ttgaaccgat
      421 tccgccctgc ttctcgcctt gagccgcatg atcccggatc aagtccggga caagcctttt
      481 cggcgaagct gtagccactt cgccggatca tgctctcagc ccacgtctgc gagaaagcct
      541 tcgagcgccg cgttgaactg tgcgggattt tcgatgttgg tgatgtgcgc cgcttcactc
      601 accacgacga accgcgcgtc cttcacggcg gcgcgccagc gcccggccag ttccggcggc
      661 gcgctcggat ccttctcgcc ggtcaggaac agcgtcgggc agccgacgcc gccgagccgc
      721 ggctcgcaat cgatgcgctt gagcgcctcg gcgcacccga catagccggc gaccgacgtg
      781 ccgcggatca tctgcgcgac cttggtcagc tccggcggct tcgcggcacg gaacgccggc
      841 gtgaaccagc gctgcagcgt cggctcgacc agcgcgtcca tgccgtcgcg ccgcgccgtc
      901 gcgatccttg gatcccagga cgcggcgaac tcgggtggcg cgttgcagcg gcagtcgcag
      961 gcggcgagcg aggtcacccg gccgggatgg cgcaaggcga tctcgatccc ggtcgtgccg
     1021 ccgagcgaga ggccgacata atgcgaccgc gcgatgccga gcgtgtccca gagcgccacg
     1081 acgtcgccgc tgagcagcgc gaaatcgtag gcgccctcgc tcgcgtcggt gccgccatgg
     1141 ccgcgcgtgt cgtagcgcag gacgcggaag cggtccgcga gccgggccgc ctgctcgtcc
     1201 cacagcgaca ggtcggtcgc atgcgagttg ctgaacgtca gccagggcgc gccgtcgcgg
     1261 ccctggatcg cgacgttgaa tgtgatgccg ttcgccctga cgcgctcgcg catgtcgccg
     1321 acgacccgga gctacttgag gaccgccttg gcgcgttcca cgagctccgg cggcgtggcg
     1381 tagatctcgt tgacgatctt ctgcacctcc gcgcccggca gcggatcgac gttgagtttg
     1441 gtcttggccg cctcggccag gaattccggg tccttcatgg tcgcgtcgaa ggctttccgg
     1501 taggcctcga cgcgctcggc cggcaccccg ggcggcagca cgtaaggccg gccgaaggcg
     1561 agctggctga agatcacgcc caaaaccttc ttgtcttcgt cgcgcttcac gaagtcccag
     1621 atcttgggga tgcccatggc gttgagcttc gggtcccctt cgggcgacga gatctgcgcg
     1681 atgatgcgaa cctgcttgtt gtcgagccag tgctggaagc tggtgatgaa gctcgtccac
     1741 tggatgccgc agatgccgtc cgtctcgccc ttctccatgg ccagcgccgc ctgctgcgag
     1801 ccgggatagc cgccgatcac cttgaacttg gtgccgagca cgttgttgag cacggtcgga
     1861 tattgctcga tcgacgaggt gccgcccgac gagccgacga tcagctgctt gtcgaagacg
     1921 tcggtgaacg acttcaccgg cgaggtgtgc caggcgacgc agatgctggt ttcgcggttg
     1981 gcgctgccga tgaaatggaa ctggcgcgga tcgaaatgcg tctgcgcggc gtcgccgatc
     2041 aggggctcca tcacggcgcc catgaacagc gcgccgaagg cggagccgtc gcgcggcgac
     2101 ttgttgtaga gcaggttcgc ggcgacgagg ctgccggctc ccggcaggtt gcgcccgacg
     2161 accttcgggc ttcccggcag atgcttgccg atatggcggt tgagcaccat cgcgtaggtg
     2221 ccgtagccgc cgcccggcgc cgagccgatg atgaaatcga ccgtcttgcc ggtgaagaac
     2281 ctggccggat cctcctgcgc cgccgcgccc gtgctgacgg cggcggcgac gccgccgtcg
     2341 acgagaaagg cggccagacc tctgttacgg ctcataaggg cgtcctccgg aggacttgtg
     2401 ttgtgaacac gttattggc
//
LOCUS       DATAIQ010000372         1934 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_435023, whole genome shotgun sequence.
ACCESSION   DATAIQ010000372 DATAIQ010000000
VERSION     DATAIQ010000372.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1934)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1934)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1934
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_435023"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..534)
                     /locus_tag="VHN20_06285"
     CDS             complement(<1..534)
                     /locus_tag="VHN20_06285"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX2725410.1"
                     /translation="MCGHEKQIRVARTAVPGTGSPGLSSRSARLKLHDQSVSSRPVNC
                     ALGFAKKRPGEGFMNNRLRPSWRHPFAALAFGLLMISASDPAAAQARATMKQHRIADG
                     VYMMENSSGSGNSTFLITDEGVVVFDADVRTADQVLAAIRKLTDKKIRYLITSHAAGD
                     HATGAWHFREDRPVYIAT"
     gene            complement(606..1337)
                     /locus_tag="VHN20_06290"
     CDS             complement(606..1337)
                     /locus_tag="VHN20_06290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015952810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2459 domain-containing protein"
                     /protein_id="HEX2725411.1"
                     /translation="MRRARRALRRVATVFAFLLLAFLLAAVLTARSGDPAIFPATGDE
                     AVTIHLVSHGYHSGLVLPRAALASEAGQRGYAALLDVAARFAAYDLIEVGWGDEQFYR
                     HVPTAASLEWKFALQALFRPGNASVLHVVGLSAAARQVFPISDIVALRLSREGFGRLV
                     AALEASFTKDAQSRPIHLGPGLYGPSLFYRAVGEFYLLNVCNHWTARLLDVAGVPTAP
                     VLATLPSGLLLDLRLRSGLTRIPTA"
     gene            complement(1334..>1934)
                     /locus_tag="VHN20_06295"
     CDS             complement(1334..>1934)
                     /locus_tag="VHN20_06295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HEX2725412.1"
                     /translation="IAKLLHPFMPFLTEELWDGRGGEGLLMLAAWPHLHGLADADAEA
                     EIGWVVDLVSEIRSARSETNVPAGAQIPLVLVNASPQVRARLAHWEETIKRLARLSEI
                     GVAANAPPKAVQLIVRGEVAALPLEGIVDLAAEQGRLQKELSKVDADIAKIEAKLGNA
                     DFLRRAPEEVVEEQRERKEEAEARKRKIDEALLRLRAAA"
BASE COUNT          347 a          645 c          644 g          298 t
ORIGIN      
        1 cgtcgcgatg tagacgggcc gatcctcgcg gaagtgccat gcccccgtcg cgtggtcgcc
       61 ggcagcatgc gaggtgatca gatagcgtat cttcttgtcg gtgagcttgc gaatggcggc
      121 gagcacctga tcggcggtgc gcacgtccgc gtcgaacacc accacacctt cgtcggtgat
      181 caggaatgtc gaatttccgg agcccgacga attctccatc atgtagacgc cgtcggcgat
      241 gcgatgctgc ttcatcgtcg cgcgcgcctg cgcggcggcc ggatcagatg cggaaatcat
      301 caaaagtccg aaggccaacg cggcgaacgg atggcgccaa gacgggcgta agcgattgtt
      361 catgaaaccc tccccaggac gctttttggc aaatcctaaa gcgcagttta ccggccggga
      421 agacacggac tggtcatgca gcttcaggcg ggcgcttcgc gaagacaatc cagggctacc
      481 ggttcctggc acggcggttc gggcgacccg gatctgtttc tcgtggccgc acatgatcgc
      541 ggatcagatc acgtccggga caagcctttc tcggcgagca agtcggcttc gccgcatcgt
      601 ggccctcaag cagtcgggat ccgcgtcagc cccgagcgca ggcgcaggtc cagcagcagg
      661 ccggacggca gcgtggcgag caccggcgcc gtcggcacgc cggcgacatc gagcagccgc
      721 gccgtccagt gattgcagac gttgagcagg tagaactccc cgaccgcgcg gtagaacagg
      781 ctcggcccgt acagcccggg cccgaggtgg atgggccggc tttgtgcatc cttggtgaag
      841 gacgcctcga gggctgccac gagccgcccg aacccttcgc gcgacaggcg cagggccacg
      901 atgtcagaaa tcgggaagac ctgacgcgcc gccgcggaca gcccgaccac atgcaggacg
      961 gacgcgttgc cgggacgaaa cagcgcctgt agcgcaaact tccactcgag cgacgcagca
     1021 gtcggcacat gacggtagaa ctgctcgtcg ccccagccca cctcgatgag gtcgtaggcc
     1081 gcgaaccgag ctgcgacatc gagcagagcg gcgtacccgc gctgccctgc ttcactcgcg
     1141 agcgcagcgc gcggcaggac aaggcccgag tggtatccgt ggctgacgag gtgaattgtg
     1201 acggcctcgt cgccggtcgc ggggaagatc gccggatcgc cggagcgggc ggtcagcact
     1261 gccgcgagca gaaaggcaag caacaaaaaa gcgaaaaccg tggcgacgcg gcgaagcgcg
     1321 cgccgtgcgc gcctcatgcc gctgccctga gccgcaacag cgcctcgtcg atcttgcgct
     1381 tgcgcgcctc cgcttcctcc ttgcgctcgc gctgctcctc gacgacctct tccggagcgc
     1441 gccgcaggaa gtcggcattg ccgagtttcg cctcgatctt ggcgatgtcg gcgtcgacct
     1501 tcgagagctc tttctggaga cggccctgct cggccgcgag gtcgacgatg ccctcgagcg
     1561 gcaacgcagc gacctctccg cgcacgatca gctgcaccgc cttgggtgga gcatttgcgg
     1621 caaccccgat ctcggagagt cgcgcgaggc gcttgatcgt ctcctcccaa tgcgcgagcc
     1681 gggcgcgcac ctgcggcgag gcgttgacca gcaccagcgg gatctgggcg ccggccggaa
     1741 cattggtctc ggagcgggcg gagcggatct cgctgacgag atcgacgacc cagccgatct
     1801 cggcctcggc atcggcatca gcgaggccgt gcaggtgcgg ccaggccgcc agcatgagca
     1861 gcccctcccc tccccggccg tcccacaatt cctcggtcag gaatggcatg aacgggtgca
     1921 ggagcttcgc gatt
//
LOCUS       DATAIQ010000373         3376 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_435049, whole genome shotgun sequence.
ACCESSION   DATAIQ010000373 DATAIQ010000000
VERSION     DATAIQ010000373.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3376)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3376)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3376
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_435049"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            168..986
                     /locus_tag="VHN20_06300"
     CDS             168..986
                     /locus_tag="VHN20_06300"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX2725413.1"
                     /translation="MFAKINHVAIVSEKYALLGKFYEAVFGMRPGSTSRPARAITVGD
                     GYVGLNINPRKAGRPAGLDHFGIEVAEIETVFERMRSKYPDAGWVQRPGTRPFAGITA
                     NDPDGNIFDLSQKDMKNRASSYVENTGDQKERHVSHVAVRTMRPDEMARFYVDVFEFA
                     EQNVGNGSGDPNHYLTDGKITLVIMPWRIQNYLDQNILPTGMDHVGFTVESLDKLKED
                     VDEVAGVNPILSPIPVGRGKEGGARLELLRKQCPIGDHFMADPDHTLIAVRQRQ"
     gene            995..1894
                     /locus_tag="VHN20_06305"
     CDS             995..1894
                     /locus_tag="VHN20_06305"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX2725414.1"
                     /translation="MTEAAATAGSSAATETFVTVQGLRTRYLAQGDGPPAILVHGASL
                     GSSADVWRRNLGPLAAHGVRAIAYDQPGFGMSDDPPDWGLGFRTSFILAFMDALGLDG
                     AALVGHSQAGAMAVRLALTHGERVSRVVVLGTGSLLPPLPDKEGSKSGPAEGEEGGDA
                     EPTVADARALLEANLFDHALITDDEVALRLRMSTGKNFRAFQARKSAGAAGRAGGGQK
                     DKPLWQRLGEIRQPLLMIYGRDDRGEAARRVELARREIPDLDLHVVPACKHLVQWDAA
                     DAFHRLAGPFLREADTAAVRGAA"
     gene            2072..2788
                     /locus_tag="VHN20_06310"
     CDS             2072..2788
                     /locus_tag="VHN20_06310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012335461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725415.1"
                     /translation="MPSRFRAERNARALARLERSTPESFPGCVLAHALARPFIPPTPR
                     RAVESYWRAHPLRADYLARTLAVRSGSPPGWSWRLDPRKRNGLAASFRAPPAPYREKA
                     FALGPGHCCICGQGVYRFGWHSDLWGDGKVNRKAAWHAACVAAWKLWTAPAGHDRLLR
                     KRQQRRCGETGARLLKTAEVDHRMPLFRVWREHRERPWPELLGFWGTTNLQVVNRPAH
                     VAKCALEAGERAGRRALAGP"
     gene            complement(2880..>3376)
                     /locus_tag="VHN20_06315"
     CDS             complement(2880..>3376)
                     /locus_tag="VHN20_06315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725416.1"
                     /translation="ARYPSVVSRSPHVPRFYFHLRTDGCVADDELGSEFPNLEAAYLE
                     AFEAARAIWAEKLLSREDPTRCAFLIASSPDGEPLLEMPFSEVLEASKGRVLRKPASP
                     LFARARDSAEAMMERVRALEAAITTARERVSEARELNARLARLVRLCATSHPPDHSAG
                     GASV"
BASE COUNT          558 a         1160 c         1148 g          510 t
ORIGIN      
        1 cggctcatgt ctcccggcat ttcgacgcgg aaatatggtt tcgtggcatc gagcgggtgc
       61 ggggcgctga agggcgcggc tattgcacga ttcctgccgt tcggacacga tcgtgcgtcc
      121 cctctgggga ggcgggccaa ggaacgcccg aagggagagg gaagcgcatg ttcgccaaga
      181 tcaatcatgt cgccatcgtc agcgagaaat acgccctgct cggcaagttc tatgaagccg
      241 tgttcggcat gaggccgggc agcacctcgc gtccggcgcg ggcgatcacg gtcggggacg
      301 gctacgtcgg cctcaacatc aacccgcgca aggcggggag gccggcgggg ctcgatcatt
      361 tcggcatcga ggtggcggaa atcgagaccg tgttcgagcg catgcgcagc aaatacccgg
      421 acgccggctg ggttcagcga ccgggcacgc ggccgttcgc aggcatcacc gccaacgatc
      481 ccgacggcaa catcttcgac ctgtcgcaga aggacatgaa gaaccgggcg tccagctatg
      541 tggagaatac cggcgaccag aaagagcggc acgtcagtca tgtcgccgtg cgcaccatgc
      601 ggccggacga aatggcgcgc ttctatgtcg acgtgttcga gtttgccgag cagaatgtcg
      661 gcaacggcag cggcgacccc aatcattatt tgaccgacgg caagatcacg ctcgtgatca
      721 tgccgtggcg catccagaac tatctcgacc agaatattct gccgaccggc atggaccacg
      781 tcggctttac cgtcgagagc ctcgacaaac tcaaggagga cgtcgacgag gtggcgggcg
      841 tcaacccgat cctgtcgccc atcccggtcg gcagaggcaa ggaagggggc gcccggctcg
      901 agttgctcag aaagcaatgc ccgatcggcg atcacttcat ggccgacccg gaccataccc
      961 tcatcgccgt gcgccagcgg cagtgagcgc cgccatgacc gaagcagcag cgacagcggg
     1021 gtcatccgct gcgaccgaga cgttcgtcac tgtgcagggg ctgcgcaccc gttatctggc
     1081 gcagggcgat ggtccgccgg ccatcctggt gcacggcgcc tcgctcggct cgtcggcgga
     1141 cgtgtggcgc cgcaacctcg gccctctcgc cgcgcatggc gtgcgcgcca tcgcctatga
     1201 ccagccgggc ttcggcatgt cggacgatcc gccggattgg ggcctcggct ttcgcacgtc
     1261 gttcatcctc gccttcatgg acgcgctcgg tctcgacggc gccgcgctcg tcggccattc
     1321 gcaggccggg gcgatggccg tgcggctggc cctgacgcat ggcgagcggg tgagccgcgt
     1381 cgtggtgctc ggcaccggca gccttctgcc gcccctcccc gacaaggagg gcagcaagag
     1441 cggtcctgcc gaaggcgagg aaggcggcga cgccgagccg accgtggccg acgcgagggc
     1501 gctgctcgaa gccaatctgt tcgaccatgc cttgatcacc gacgacgagg tcgcgctgcg
     1561 tctgcgcatg agcacgggca agaatttccg cgccttccag gcgcgcaaga gtgctggcgc
     1621 ggcggggcgt gccggcggcg gtcagaagga caagccgctg tggcaacggc tcggcgagat
     1681 tcgtcaaccg ctcctcatga tctacggccg cgacgatcgc ggcgaagcgg cgcggcgtgt
     1741 cgagctcgcc cgccgggaga tcccggacct ggatctgcac gtcgtccccg cctgcaagca
     1801 tctcgtgcaa tgggatgccg ccgatgcctt ccaccgcctc gccggcccgt tcctgcgcga
     1861 ggccgacacc gcggccgtgc gcggcgcagc ctagccatcc gccctgcgga tctgggcggc
     1921 agccgaaatt cgcagcgagc acccacgttt aacgccgcgc taaccgcgcc cttgcaaagc
     1981 tcgccgccgc atggcgaaga cggcggtaca cgagagcgcg gctcccgcct gggagggatg
     2041 gttcgcggac gcacggcggc agatcgagac gatgccgtcg cgtttccgtg ccgagcgcaa
     2101 cgcgcgcgcg ctcgcccgcc tcgagcgcag cacgccggaa agttttccgg gctgcgtcct
     2161 tgcgcacgcc ctggcgcggc cattcattcc cccgacgccc cgccgcgccg tcgagagcta
     2221 ctggcgggct catccgttgc gggcagatta cctggcgcgg acgctggcgg tgcgcagcgg
     2281 ctcgccgccc ggctggtcgt ggcggctcga tccgcgcaag cgcaacggtc ttgcggccag
     2341 cttccgagcg ccgccggcgc cctatcgcga gaaagccttc gcgctcggtc ccggccattg
     2401 ctgcatctgc ggccagggcg tctaccgctt cggctggcac agcgatctct ggggcgacgg
     2461 caaggtcaat cgcaaggcgg cctggcacgc cgcctgcgtc gcggcctgga agctgtggac
     2521 cgccccggcc gggcacgacc gcctgttgcg gaagcggcag cagcggcgct gcggcgagac
     2581 cggcgcgcgg ctgctcaaga ccgccgaggt cgatcatcgc atgcccctct tccgcgtctg
     2641 gcgcgagcac cgcgaacggc cgtggccgga gctgctcggc ttctggggca cgaccaacct
     2701 gcaggtcgtc aaccgcccgg cgcatgtcgc caaatgcgcc ctcgaagccg gcgagcgcgc
     2761 cggacgccgc gccctcgccg gtccgtagcg cctggatccg gttcccgaag aaagctgatc
     2821 gcgtcgcggc tcaaaatcct gcacggtcgc aggagatgag gcgcgggacc acgccgtcgt
     2881 cagaccgatg cgccgccggc tgaatgatcc ggcggatgtg aggtggcgca gagcctgacc
     2941 agcctggcca gcctggcatt cagctcgcgc gcttcggaca cgcgctcgcg cgcggtcgtg
     3001 atcgcggctt cgagggcgcg caccctctcc atcatcgcct cggcgctatc cctcgcccgg
     3061 gcaaagagag gagacgccgg cttgcgcaag acccgcccct tcgatgcctc gagaacctcc
     3121 gagaacggca tttcaagcaa aggctcgcca tccgggctgc tggcgatcag gaacgcgcaa
     3181 cgcgttggat cctcgcggct gagcaacttc tcggcccaaa tggctctcgc cgcctcgaag
     3241 gcttcgagat aggcggcttc gaggttgggg aattccgacc ccagctcgtc gtcggcgacg
     3301 catccatcag tgcgcaaatg gaagtagaag cggggcacgt gcgggctcct tgacacgacc
     3361 gacggataac gcgcag
//
LOCUS       DATAIQ010000374         2601 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_389280, whole genome shotgun sequence.
ACCESSION   DATAIQ010000374 DATAIQ010000000
VERSION     DATAIQ010000374.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2601)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2601)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2601
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_389280"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..168
                     /locus_tag="VHN20_06320"
     CDS             <1..168
                     /locus_tag="VHN20_06320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011580382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter"
                     /protein_id="HEX2725417.1"
                     /translation="TGNLDQHTAGHVFTTLVAIVRASGLAALIATHNLDLAARMDRRV
                     TIRDGRVVPLP"
     gene            284..>2601
                     /gene="dnaE"
                     /locus_tag="VHN20_06325"
     CDS             284..>2601
                     /gene="dnaE"
                     /locus_tag="VHN20_06325"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HEX2725418.1"
                     /translation="MARVLKEVGFVHLHVHSSYSLLEGALKVADLAKLAAADRQPALA
                     LTDTNNLFGALEFSEKLAGLGIQPIAGMQLSVVFEEPDPTARQAVPPASNVVLLAQSE
                     DGYRNLMRLASRAYFDTPLGDSPRVAARALAESAAGLVALTGGFSGPVDTALRNGRHD
                     LAAARLDHLINTFGERLYIEIQRHRLDEERLVEPTLIALADRHGLPLVATNEPFFAKP
                     DDFEAHDALLALAEGRLVADENRRRVSAQHAFKTRQQMAELFADLPDAMQATVEIAMR
                     CNFRVPTRKPILPRFARGDDPQAADEAEELRRQAQEGLAARLAAHGPAPGLTEQHYRE
                     RLAYEVSVISRMKFPGYFLIVSDFIKWAKDHGIPVGPGRGSGAGSLVAYALTITDLDP
                     LQFGLLFERFLNPERVSMPDFDIDFCIEGRERVIEYVQQRYGEEQVAQIITFGTLLAR
                     GVMRDVGRVLEMPYGQVDKLTKLVPQNPANPVTLKQAIEDEPRLQAAAEEPVVARMLA
                     IAQKLEGLHRHASTHAAGVVIGDRPLEQLVPLYRDPKSGMRVTQFNMKWVEQAGLVKF
                     DFLGLKTLTVLKTAVDLIAAKGVTIDLAAIPLDDPKTYEILGRGETVGIFQVESVGMR
                     KALVEMRADRIEDLIALVALYRPGPMANIPVYCSRKLGNDPEPEERWYLHPKLAPILK
                     ETYGIIVYQEQVMEVAKTLAGYSLGDADLLRRAMGKKIKSEMDAQRERFLSGAVERGL
                     TKATSNEIFDLLAKFADYGFNKSHAAAYALIA"
BASE COUNT          437 a          925 c          829 g          410 t
ORIGIN      
        1 acgggcaatc tcgaccagca caccgccggg cacgttttca cgacactggt cgccatcgtg
       61 cgcgcctccg gcctcgcggc gctgatcgcg acgcataacc tggacctcgc ggcgcgcatg
      121 gaccgccgcg tcaccatccg cgacggccgc gtcgtgccgc tcccgtaacc acctcccctg
      181 cacgcggggg gacatggcag cccccaccat ccacagccgc ggcgcgcggg gccctcgacg
      241 cgtggggccg cctgcgcgat agggaagggc ggaggcggac ggcatggcac gtgtgttgaa
      301 agaggttggg ttcgttcatc tgcacgtgca ctcgtcctat tcgctgctcg agggcgcgct
      361 gaaggtcgcc gacctcgcca agctcgccgc cgccgaccgc cagccggccc tggccctgac
      421 cgacaccaac aacctgttcg gcgcgcttga gttttcggaa aagctcgcgg gcctgggcat
      481 ccagccgatc gccggcatgc agctctcggt cgtgttcgag gagcccgatc cgaccgcgcg
      541 ccaggcggtg cccccggcga gcaacgtcgt gctgctggcc cagagcgaag acggctaccg
      601 caaccttatg cgcctcgcca gccgggccta tttcgacacg ccgctcggcg attcgccgcg
      661 cgtcgcggcc cgtgccctgg cggagagcgc cgcggggctc gtggcgctga ccggcggctt
      721 ctccggccct gtcgatacgg ccttgcgtaa tgggcggcac gatctcgcgg cggcgcgcct
      781 cgaccacctc atcaacacgt tcggcgaacg gctctatatc gaaatccagc gtcacaggct
      841 cgacgaagag cgactggtcg aaccgaccct catcgcgctc gccgaccgcc acggcctgcc
      901 gctggtcgcc accaacgagc cgttttttgc caagcccgat gatttcgagg cgcacgacgc
      961 ccttctggcg ctcgccgaag gacgcctcgt tgccgacgaa aatcggcgcc gcgtctcggc
     1021 gcagcacgca ttcaagacgc gccagcagat ggccgagctg ttcgcggatc tgccggacgc
     1081 catgcaggcg acggtcgaga tcgcgatgcg ctgcaatttc cgcgtcccga cccgcaagcc
     1141 catcctgccg cgtttcgcgc gcggcgacga cccacaggca gccgacgagg ccgaggagct
     1201 ccggcgccag gcgcaggagg ggctggccgc ccgtctcgcc gcacacggcc ctgcgcctgg
     1261 tctcaccgag cagcattacc gcgagcgcct cgcctatgag gtgtcggtga tcagccggat
     1321 gaagtttccc ggctacttcc tgatcgtctc cgacttcatc aaatgggcaa aggaccatgg
     1381 catcccggtc ggtccgggcc gcggctcggg cgccggctcc ctcgtcgcct acgcgctgac
     1441 catcaccgac ctagacccgc tccagttcgg gcttctgttc gagcgcttcc tcaatcccga
     1501 acgcgtgtcg atgcccgact tcgatatcga cttctgcatc gagggccgcg agcgcgtcat
     1561 cgaatacgtg cagcagcgct acggcgagga gcaggtggcg caaatcatca ccttcggcac
     1621 gctgctggcg cgcggcgtga tgcgcgacgt gggccgcgtg ctcgaaatgc cctacgggca
     1681 ggtcgacaag ctcacgaagc tcgtgccgca gaacccggcc aacccggtga ccctcaagca
     1741 ggccatcgag gacgagccgc gcctgcaggc cgcagccgag gagccggtgg tggcgcgcat
     1801 gcttgccatc gcgcagaagc tcgagggcct gcaccgccac gcctcgaccc acgcggcggg
     1861 cgtcgtgatc ggcgatcggc ctctggagca gctcgtgccg ctctaccgcg atcccaaatc
     1921 gggcatgcgc gtgacccagt tcaacatgaa atgggtcgag caggccgggc tcgtgaaatt
     1981 cgactttctc ggtctcaaga cgctgaccgt gctcaagacg gccgtcgacc tgatcgccgc
     2041 caagggcgtc accatcgatc tggcggcgat accgctcgac gatcccaaga cctacgagat
     2101 cctggggcgc ggcgaaacgg tcggcatctt ccaggtggaa agtgtcggca tgcgcaaggc
     2161 gctggtggag atgcgcgccg accgcattga ggacctgatc gcgctggtcg cgctctaccg
     2221 cccgggcccg atggccaaca ttccggtcta ttgctcacgc aagctcggca atgatcccga
     2281 gcccgaggag cgctggtatc tgcatcccaa gctggccccg atcctgaagg agacatatgg
     2341 catcatcgtc taccaggagc aggtcatgga ggtcgccaag accctggccg gctactcgct
     2401 cggggatgcc gatcttctgc gccgcgccat gggcaagaag atcaagtccg agatggatgc
     2461 gcagcgcgag cgcttcctgt caggcgccgt cgagcgcggg ctgaccaagg cgacttcgaa
     2521 cgagatcttc gaccttctcg ccaagttcgc cgactacggc ttcaataaga gccacgcggc
     2581 cgcctacgcg ctgatcgcct a
//
LOCUS       DATAIQ010000375         2503 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_297554, whole genome shotgun sequence.
ACCESSION   DATAIQ010000375 DATAIQ010000000
VERSION     DATAIQ010000375.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2503)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2503)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2503
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_297554"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..690)
                     /locus_tag="VHN20_06330"
     CDS             complement(<1..690)
                     /locus_tag="VHN20_06330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725419.1"
                     /translation="MGTKHVVAAMLAIAGLAFSPARADPVADFYKGKQISWILSAGEG
                     GGYSSYARAFAPFLGAHIPGNPKVVVQNMPGAGGIRAMNYLFTVAPKDGTVIGLVHSS
                     VPFAPLYGLQGASFDPRKMHWIGSMNATTAICVAWHTAGIKGWQDMMSKEYLVGGTGA
                     GSQMETMPAMLNHLFGTRMKVISGYKGGNDVYLAMERGEVAGRSGGLFSSISSTRPDW
                     FPQKKVAVPIQI"
     gene            complement(805..1509)
                     /locus_tag="VHN20_06335"
     CDS             complement(805..1509)
                     /locus_tag="VHN20_06335"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX2725420.1"
                     /translation="MGRAVTVGDGYVGLNINPRRAGRSAGLDHFGIEVEDAETVWARL
                     RKTYPTVKWLQRPSTRPFAGVTTHDPDGNVFDISQKDMKNRTSVYVENTGEANPRHID
                     HVAMRTLRPSEMAEFYGEVFELAPANKAEGDPNHYMTDGHMTLVIMPWDITDYDGTGI
                     ITPGMDHIGFKVENMETFQQDLSRITSDNPRLAPAPVSTGSEGAALEKLFKRSCPLGQ
                     IRLADPDGILIAVRAD"
     gene            complement(1494..1616)
                     /locus_tag="VHN20_06340"
     CDS             complement(1494..1616)
                     /locus_tag="VHN20_06340"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX2725421.1"
                     /translation="MFSKINHVAIVSDHYAQLAQFYQAVFGMKTSPTTRAWAAP"
     gene            1762..>2503
                     /locus_tag="VHN20_06345"
     CDS             1762..>2503
                     /locus_tag="VHN20_06345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX2725422.1"
                     /translation="MPSHAKPLAVVTGASAGIGYELAKLCARNGYDLVVAADQSKITE
                     AAEEFRDLGAAVDAVQADLATIEGVDTLYAAVQGRPVDALLANAGHGLGGAFLDQNFS
                     EARHVIDTNVTGTIYLIQKVGRDMRARGKGRILITGSEAGFIPGAFHAVYNGTKAFID
                     SFSFALRNELKDTDVTVTCLMPGPTETEFFERADMMDTKVGRSSKEDPADVAKTGFDA
                     MMRGDGDIVSGWTNKVSTALASVTPAGLL"
BASE COUNT          405 a          823 c          819 g          456 t
ORIGIN      
        1 gatctggatc ggcaccgcga ccttcttctg cgggaaccag tccgggcgcg tcgagctgat
       61 cgaggagaac aggccgccgg agcggccggc gacctcgccc cgttccatgg cgagatagac
      121 gtcgttgccg cccttgtagc cggagatcac cttcatcctg gtgccgaaca ggtggttcag
      181 catcgccggc atggtctcca tctgcgagcc ggcgccggtg ccgccgacca ggtattcctt
      241 gctcatcatg tcctgccagc ccttgatgcc ggccgtgtgc caggcgacgc agatcgcggt
      301 ggtcgcgttc atgctgccga tccagtgcat cttgcgcggg tcgaagctgg cgccctggag
      361 cccgtagagc ggcgcgaagg gcacgctcga atggaccagc ccgatcacgg tgccgtcctt
      421 cggcgccacc gtgaacaggt agttcatggc gcggataccg ccggcgcccg gcatgttctg
      481 cacgacgacc ttgggattgc cgggaatatg ggcgccgagg aacggcgcga aggcgcgcgc
      541 atagctggaa tagccgccgc cttcgccggc gctcaggatc caggagatct gcttgccctt
      601 gtagaagtcg gccaccggat cggctctcgc cggactgaag gcgaggcccg cgatcgccag
      661 catcgccgca acgacgtgct tcgtacccat gtcgttcctc ccggatttgt tttcgcttgc
      721 gcttatttcg tctcaatcac tcccgaacgc cgggcgccgt gtttttgttc gcggcgcgat
      781 cggctcttca tctcacgcca atgatcagtc ggcgcgcacg gcgatcagga tgccgtcggg
      841 atcggccagc ctgatctggc cgagcgggca gctgcgcttg aacaatttct ccagcgccgc
      901 gccctcggaa ccggtgctga ccggcgccgg ggcaaggcgc gggttgtcgc tcgtgatcct
      961 gctcaagtcc tgctggaagg tctccatgtt ctcgaccttg aagccgatat ggtccatgcc
     1021 cggcgtgatg atgccggtgc cgtcatagtc ggtgatgtcc cagggcatga tcacgagcgt
     1081 catgtgcccg tcggtcatgt aatggttggg atcgccttcg gccttgttgg ccggagccag
     1141 ctcgaaaacc tcgccgtaga attccgccat ctcggacggc cgcagcgtgc gcatggcgac
     1201 gtggtcgatg tggcgcggat tggcctcgcc ggtgttctcc acatacaccg aggtgcggtt
     1261 cttcatgtcc ttctgcgaga tgtcgaacac gttgccgtcg gggtcgtgcg tggtgacgcc
     1321 cgcgaaaggg cgtgtcgacg ggcgctgcag ccacttgacc gtcgggtatg tcttgcgcag
     1381 ccgggcccag accgtctccg cgtcctcgac ctcgatgccg aaatggtcga gcccggccga
     1441 gcggccggcg cggcggggat tgatgttgag cccgacatag ccgtcgccca ccgtcacggc
     1501 gcggcccacg cgcgggtcgt cggcgaggtc ttcatgccga acaccgcctg atagaactgg
     1561 gccagctggg catagtggtc gctgacgatg gcgacgtgat tgatctttga gaacattcgt
     1621 tttcctcccg gccggaagtg tcacggcgcc ctcgcgcgtt ggcaaggggt gttgtgggcc
     1681 gcgtcacgct gcccctgcaa cctgccgcgc gcattgcgca ttgagggagg acagcagcga
     1741 gagagaggag tggaaatcca catgccttca catgccaaac ccttggcggt cgtcaccggc
     1801 gcatccgccg gcatcggcta cgagcttgcc aagctatgcg cgcgaaacgg ctacgacctc
     1861 gtcgtcgccg ccgaccagtc caagatcacc gaggcggccg aggagttccg cgacctcggc
     1921 gcggcggtcg atgccgtcca ggccgatctt gcgacgatcg aaggcgtcga caccctctac
     1981 gccgccgtgc aggggcgtcc ggtcgacgcc ctcctggcta acgcggggca tggtctcggc
     2041 ggcgcctttc tcgaccagaa tttcagcgag gcccggcacg tcatcgacac caacgtcacc
     2101 ggcaccatct acctgatcca gaaggtcggc cgcgacatgc gggcccgtgg caaggggcgc
     2161 atcctgatca ccggctcgga ggccggcttc atcccggggg cgttccatgc cgtctacaac
     2221 ggcaccaagg ccttcatcga ttcgttctcc ttcgcgctgc gcaacgagct gaaggacacg
     2281 gacgtgacgg tcacatgcct gatgccggga ccgacggaga cggagttctt cgagcgcgcc
     2341 gacatgatgg acaccaaggt cggacgctcg tccaaggaag accccgccga cgtggcgaaa
     2401 accggcttcg acgcgatgat gcgcggagac ggcgacatcg tgagcggctg gacgaacaag
     2461 gtcagcacgg ctctcgcctc cgtcactccc gccggcctcc tcg
//
LOCUS       DATAIQ010000376         3397 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_112939, whole genome shotgun sequence.
ACCESSION   DATAIQ010000376 DATAIQ010000000
VERSION     DATAIQ010000376.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3397)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3397)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3397
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_112939"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..942
                     /locus_tag="VHN20_06350"
     CDS             <1..942
                     /locus_tag="VHN20_06350"
                     /inference="COORDINATES: protein motif:HMM:NF012573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005509 - calcium ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HEX2725423.1"
                     /translation="GSDTVVAGVSYTLDATSHVETLQADAQSLDLTLTGNDFANTIIG
                     SQGDDTLDGAGGADRLVGRFGDDTYVVDQAGDRVIENFGEGTDTVRSAITLTMPSFVE
                     VLVLEGTANLNGSAVGFGNKRMIGNSGNNTLSGAFGNDQMFGGAGNDTLFGHNGIDTL
                     DGGNQNDLLGGGRFDDVLLGGANDDTLLGDEGNDRLDGGTHSDVLIGGLGRDTLIGGP
                     GADRFDFNAVEEIGGDTVHFNRREGDKIDLSTIDANPFAPGNQAFIRTVLGTFAPGIQ
                     GVLMIREGRVSGDLNGDLRADFSLSVIGAVTFADIIM"
     gene            complement(1024..1932)
                     /locus_tag="VHN20_06355"
     CDS             complement(1024..1932)
                     /locus_tag="VHN20_06355"
                     /inference="COORDINATES: protein motif:HMM:NF013706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEX2725424.1"
                     /translation="MPSYKLATFESAHGPRAGLIVGDRIVDIAEATSRRDDETVIGVL
                     SNWEAALDRLDDIAGRAGTPLSQARLLAPMPIPGTIFCAGANYADHAAEMARRRGQEP
                     PPDPHTIGLRSWHFIKASRCVIGPDATIELPKGSKKVDWEAELAVVIGRKAKDVAERD
                     VLSYVAGYTIANDLSARDLSRREGLPESSSFKNDWVAQKCFDGACPLGPWIALASDIP
                     NPHDLAMKLSVNGAVKQDSNTGQMIFSIEEQIADLSSRMTLWPGDVILTGTPAGVGVA
                     RGEFLKSGDVVRIEIAGIGELVNRVA"
     gene            complement(2020..3015)
                     /locus_tag="VHN20_06360"
     CDS             complement(2020..3015)
                     /locus_tag="VHN20_06360"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX2725425.1"
                     /translation="MLRRRAAAAALATGLVLGAFGPAAAQTELRMISFSGATNLPGWV
                     AEEKGFFAKEGLKVSLAVTQGSVEQVKDTLAGKYEIMSTAFDNIVAYAEDQGDYKLPE
                     PSDFVAIAGVHSGLNRLVVRPEIKTYADIKGKAVAVDAVRSGYATVLYQILENNGLVF
                     EKDYTPLPVGGTSQRLNALKGNKAVAAILSSPADMEAQKEGFAFLADASEAVGSYQGS
                     AYVVRRGWAKDHDKEVLAFIRAIAAATDYVFENKAGALEVMKKRIKGASDEELAKLYD
                     RIVGPGGLNPRAALNMNGVQTVLKIRSQYGEPRKQMGPPSKYVDLSFYERALGKK"
     gene            complement(3029..>3397)
                     /locus_tag="VHN20_06365"
     CDS             complement(3029..>3397)
                     /locus_tag="VHN20_06365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007689085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX2725426.1"
                     /translation="VDHHTVNFVIDETQRLHHIAFEVRDWSEIHKACDFLGKNEIPLV
                     WGPGRHNIGHNIAAYHMNPDRVRVELYTEMDQIKDEELGYFDPRPWHGDRPQRPKVWG
                     PETLRNYWGFGSERDLNKNL"
BASE COUNT          535 a         1134 c         1135 g          593 t
ORIGIN      
        1 ggcagcgaca cggtcgtcgc aggcgtcagc tacacgctcg atgccacctc tcacgtggag
       61 acgctgcagg cggacgccca gagcctggac ctgaccctga ccggcaacga cttcgccaac
      121 accatcatcg gcagccaggg cgacgacacg ctcgacggcg ccggcggcgc cgaccggctc
      181 gtcggccggt tcggcgacga cacctatgtc gtggatcagg cgggcgaccg ggtcatcgag
      241 aatttcgggg agggcaccga cacggtcagg tcggcgatca ccctcacgat gccgtccttt
      301 gtcgaggttc tggtccttga agggacggcc aacctcaacg gcagcgccgt tggtttcggg
      361 aacaaacgga tgatcggaaa ttccggcaac aacacgctca gcggggcttt cggcaacgac
      421 cagatgttcg ggggcgccgg caacgacacc ttgttcggcc acaacggcat cgacaccctc
      481 gacgggggca accagaacga cctgctcggc ggcgggcgtt tcgacgacgt gctgctcggc
      541 ggcgccaacg acgacaccct gcttggcgac gaaggcaacg accggctcga cggcggcacc
      601 cacagcgacg tgctcatcgg cggcctcggc cgcgacaccc tgatcggcgg cccgggcgct
      661 gaccggttcg acttcaacgc ggtggaggag atcggcgggg acaccgtcca tttcaatcgg
      721 cgcgagggcg acaagatcga cctgtccacg atcgacgcca acccgttcgc ccctggcaac
      781 caggcattca tccgcaccgt gctcggcacc ttcgcgcctg gcattcaggg cgtgctgatg
      841 atccgtgagg gcagggtgag cggcgacctc aacggcgatc tgcgcgccga cttttcgctg
      901 agcgtgattg gcgcggtcac cttcgccgac atcatcatgt aacgcgcgtc atccggaacg
      961 gcgagaaagc gccgatggcg ccgaacctgg gaatatccga gttcggttgc tcgcccgggc
     1021 ccatcacgcc acccgattca ccagctcgcc gatgccggcg atctcgatgc gcaccacgtc
     1081 gccggatttc aggaactcgc cgcgcgcgac gccgacgccg gcgggcgtgc cggtgaggat
     1141 gacgtcgccg ggccacaagg tcatgcgcga cgacaggtcg gcgatctgct cctcgatcga
     1201 aaagatcatc tggccggtgt tcgagtcctg cttcacggcg ccgttgacgc tgagcttcat
     1261 ggcgaggtcg tgcgggttcg ggatgtccga tgccagggcg atccacggcc ccagcgggca
     1321 ggcgccgtca aagcatttct gggcgaccca gtcgttcttg aaggacgagc tctcgggcag
     1381 gccctcgcgc cggctcaggt cgcgggccga cagatcgttg gcgatggtgt agccggcgac
     1441 ataggacagc acgtcgcgct ccgcgacgtc cttggccttg cgcccgatca cgacggcgag
     1501 ctcggcctcc cagtccacct tcttcgagcc tttcggcagc tcgatcgtcg cgtcggggcc
     1561 gatcacgcag cgcgaggcct tgatgaaatg ccaggagcgc aggccgatcg tgtgcggatc
     1621 gggcggcggc tcctgcccgc gccggcgcgc catctcggcg gcgtggtcgg cgtaattggc
     1681 cccggcacag aagatcgtgc ccgggatcgg catcggcgcg agcagcctgg cctgcgacag
     1741 gggcgtcccc gcccgtccgg cgatgtcgtc gagccggtcc agcgccgcct cccagttcga
     1801 gagcacgccg atgacggtct cgtcgtcgcg gcgggaggtc gcctcggcga tgtcgacgat
     1861 gcggtcgccg acgatcaggc cggcacgcgg gccatgcgcg gattcgaatg tcgcaagctt
     1921 gtaggatggc acgttgttgt ccgggttttc ttggcgatgc gaccgcaagg cgaccgcatc
     1981 gcaggttgcg ttcatgagca aagcgtcagg ggagggccgc tacttcttgc cgagcgcgcg
     2041 ctcgtagaag ctgaggtcca cgtatttgga gggcggcccc atctgcttcc tgggctcgcc
     2101 gtattgcgag cggatcttga gcaccgtctg cacgccgttc atgttgaggg cggcgcgcgg
     2161 gttcaggccg ccgggcccga cgatgcggtc gtagagcttg gcgagctctt cgtcggaggc
     2221 ccccttgatg cgcttcttca tcacctcgag cgcgccggcc ttgttctcga acacgtagtc
     2281 cgtcgccgcg gcgatggcgc ggatgaaggc aagcacctcc ttgtcgtggt ccttggccca
     2341 gccgcggcgc acgacatagg cgctgccctg gtagctgccg accgcctcgg aggcgtcggc
     2401 gaggaaggca aagccttcct tctgcgcttc catgtcggcg ggcgacgaca ggatcgcggc
     2461 gaccgccttg ttgcccttga gcgcgttcag ccgctgcgaa gttccgccga ccggaagcgg
     2521 cgtgtagtcc ttctcgaaca cgaggccgtt attctcgagg atctggtaga gcaccgtcgc
     2581 gtagccggac ctgaccgcgt cgaccgcgac cgccttgccc ttgatgtcgg cataggtctt
     2641 gatctcgggc cgcacgacca gccggttgag gccggaatgc acgccggcga tcgccacgaa
     2701 gtccgacggc tccggtagct tgtagtcgcc ctggtcctcg gcataggcga cgatgttgtc
     2761 gaacgcggtc gacatgatct cgtatttgcc ggcgagcgtg tccttgacct gctcgacaga
     2821 gccctgggtc acggccagcg agaccttcag gccttccttg gcgaagaagc ccttctcctc
     2881 ggcgacccag cccggcaggt tggtggcgcc gctgaagctg atcatgcgca gctcggtctg
     2941 cgcggccgca ggtccgaacg cgcccaggac caatcccgtc gccaatgcgg ccgcggccgc
     3001 tctccttctc agcatcgttc cctccgtctc acaggttctt gttgagatca cgctcggagc
     3061 cgaagcccca gtagttcctg agcgtctccg gcccccacac cttcggccgc tgcgggcggt
     3121 cgccgtgcca cggccgcgga tcgaagtagc cgagctcctc gtccttgatc tggtccatct
     3181 cggtgtagag ctcgacgcgc acccggtccg ggttcatgtg ataggcggcg atgttgtggc
     3241 cgatattgtg ccgccccggg ccccagacca gcgggatctc gttcttgccg aggaagtcgc
     3301 aggccttgtg gatctccgac cagtcgcgca cctcgaaggc gatgtggtgc aggcgctgcg
     3361 tctcgtcgat gacgaaattg accgtgtggt gatcgac
//
LOCUS       DATAIQ010000377         1742 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_193827, whole genome shotgun sequence.
ACCESSION   DATAIQ010000377 DATAIQ010000000
VERSION     DATAIQ010000377.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1742)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1742)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1742
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_193827"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..345
                     /locus_tag="VHN20_06370"
     CDS             <1..345
                     /locus_tag="VHN20_06370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018042028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HEX2725427.1"
                     /translation="PGTSGFVGEFLALLGAFRANPSVSFLATTGVILSAPYMLWLYSR
                     VVYGKLEKPSLATITDLNRRELAMFAPLVVLVIYYGIQPAPVLDSFAASTEALIKGYQ
                     AALSATKTAVLH"
     gene            355..>1742
                     /gene="nuoN"
                     /locus_tag="VHN20_06375"
     CDS             355..>1742
                     /gene="nuoN"
                     /locus_tag="VHN20_06375"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012452934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoN"
                     /protein_id="HEX2725428.1"
                     /translation="MAPTFSPAFPALPEIILAIGALILILVGAYRGERSTPLVNAGAL
                     ALLVVALGAVFMLPEGRVTTFGGSFVVDGFAKFMKALTLIASASAIVMSTDFLRRERI
                     ERFEYPILIVLSTIGMLMLISANDLIALYLGLELLSLSSYVIASIDRDNVRSAEAGLK
                     YFVLGALSSGMLLYGASLIYGFTGTVSFSAIATALQGTAGTGLILGLVFLSAGIAFKI
                     SAVPFHMWTPDVYEGAPTPVTAFFAAAPKMAAMAMAVRVFIGAFPGIVPQWQQIVVFI
                     AIASMALGSFAAIGQRNIKRLMAYSSIGNVGYALIGLAAGTAEGVQGVIIYMTIYLAM
                     TLGAFACILAMRRHNVMFEQIEDLSGLARTHPALAFCFASMLFSLAGIPPLAGFFAKF
                     YVFAAAIQAGLVTLSVIGVVTSVVGAYYYVRIVKIMYFDEPTGAFEPMPASLKAVLAV
                     TSAVVLLFWLVPA"
BASE COUNT          240 a          595 c          526 g          381 t
ORIGIN      
        1 ccgggcacgt ccggctttgt cggcgaattc ctggcgttgc ttggcgcctt ccgcgccaac
       61 ccatccgtgt cgttcctggc gacgacgggc gtgatcctgt cggcaccgta catgctctgg
      121 ctctacagtc gcgtcgtcta cggcaagctg gaaaagccga gcctcgcgac aatcaccgac
      181 ctcaaccggc gcgagcttgc gatgttcgcg ccgctggtcg tgctggtgat ctactatggc
      241 atccagccgg cgcctgttct ggacagcttt gccgcctcga ccgaagcgct tatcaagggc
      301 taccaggccg cgctgtccgc aaccaaaacc gcagtgctgc actgagctga cgccatggcc
      361 cctaccttca gtcccgcttt ccctgcgctt cccgagatca ttctggccat cggcgcgctg
      421 atcctgatcc tcgtcggcgc ctatcgcggc gagcgctcga ccccgctggt caacgccggc
      481 gcgctggcgc tgctcgtggt cgcgctcggc gcggtgttca tgctcccgga aggacgggtc
      541 accacgttcg gcggctcgtt cgtggtcgac ggcttcgcca agttcatgaa ggcgctgacc
      601 ctgatcgctt ccgccagcgc gatcgtgatg tcgacggatt tcttgcgccg ggagcgcatc
      661 gagcggttcg aatacccgat cctgatcgtg ctctcgacga tcggcatgct gatgctgatc
      721 tcggccaacg acctgatcgc gctctatctc ggcctcgagc tgctcagcct gtccagctac
      781 gtgatcgcgt ccatcgaccg ggacaacgtc cgctcagcgg aggcggggct caagtatttc
      841 gttctcggtg ctttatcctc agggatgctc ctctacggcg catcgctgat ctatggcttc
      901 accggcaccg tgtcgttcag cgcgatcgcg acggcgctcc agggcaccgc cgggaccggc
      961 ctgatcctcg gcctggtctt cctgtccgcc ggcatcgcct tcaagatctc ggcggtgccg
     1021 ttccatatgt ggacgcccga cgtctatgaa ggcgcgccga cgcccgtgac ggcgttcttc
     1081 gccgccgcgc ccaagatggc cgccatggcc atggccgtcc gggtgttcat cggcgccttc
     1141 ccgggcatcg tcccgcagtg gcagcagatc gtggtcttca ttgccatcgc gtcgatggcg
     1201 ctcggctcgt tcgctgccat cgggcagcgc aacatcaagc gcctgatggc gtattcgtcc
     1261 atcggcaatg tcggctatgc gctgatcggg ctcgccgccg gcaccgccga aggcgtccag
     1321 ggcgtgatca tctacatgac gatctacctg gcgatgacgc tcggcgcatt cgcgtgcatt
     1381 ctcgccatgc gccgtcataa cgtgatgttc gagcagatcg aggacctgtc cggacttgcc
     1441 cgcacgcatc cggcgctcgc cttctgcttt gcctcaatgc tgttctcgct ggcaggcatt
     1501 ccgcccctgg ccgggttctt cgccaagttc tatgtgtttg ctgccgccat tcaggcgggg
     1561 ctcgtcacgc tgtcggtgat cggcgtcgtc accagcgtcg tcggcgctta ttattacgtg
     1621 cgcatcgtca agatcatgta tttcgacgag ccgactggcg cgttcgagcc gatgcctgcc
     1681 agcctgaagg cggtgctcgc ggtcacgagc gctgtcgtac tgctgttctg gctcgttccg
     1741 gc
//
LOCUS       DATAIQ010000378         1880 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_20514, whole genome shotgun sequence.
ACCESSION   DATAIQ010000378 DATAIQ010000000
VERSION     DATAIQ010000378.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1880)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1880)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1880
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20514"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            308..1807
                     /gene="hisS"
                     /locus_tag="VHN20_06380"
     CDS             308..1807
                     /gene="hisS"
                     /locus_tag="VHN20_06380"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003609123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004821 - histidine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006427 - histidyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HEX2725429.1"
                     /translation="MSTKTDNKLKARLPRGLADRGPTDVAATNRMLEAIRETYELYGF
                     EAVETPFIEYTDALGKFLPDQDRPNEGVFSFQDDDEQWLSLRYDLTAPLARYVAENFD
                     ALPKPYRSYRAGWVFRNEKPGPGRFRQFMQFDADTVGAASVAADAEMCMMAADTLERV
                     GIRRGDYLIKVNNRKVLDGVLEAIGLGGEGKAGQRLTVLRAIDKLDRLGTEGVRQLLG
                     EGRKDESGDFTRGAQLDGKSIDRVLQFVGQTEPARAGYAATLDVWLGLVRGTVGEEGI
                     QELRDIATLLDAAGYHDRVAITAETVRGLEYYTGPVYEAELTFTVANDEGQPVRFGSV
                     GGGGRYDGLIGRFRPEPVPATGFSIGVSRLLAALQTVRSPIVADADAQGPVVVLVMDR
                     DRVADYQRMVATLRNGGVRAELYLGASGMKAQMKYADRRRSPCVVIQGSDERARGEVQ
                     IKDLALGATLAARGKDRADYLEKTAEAQFSTAESNLLSAVRQVLARTGK"
BASE COUNT          310 a          649 c          637 g          284 t
ORIGIN      
        1 ccaagatcgt gctgacctcg tccgacaagg ctgccatcga ccgcgcccgg gccgtcaagg
       61 cgccttgcga cgcgctgctg cccaagccgt tccgcgggcc ggacatcgac gcggtcctgc
      121 atcggctcta cgacctcaag accccttacg aggcagtcgg cgccggcgcg ctggcttagc
      181 tcctgacggg cccctcccct ggggagtccg gggggtccga ggtcctgcag agcggcgtgc
      241 cacgcggtcg cttgccgctg ggcggcgcgc gggctatgcc gcacgccgac agcccacgat
      301 ccgagcgatg tccacgaaaa ccgataacaa gctgaaggcg cgcctgccgc gcggtctcgc
      361 cgatcgcggc ccgaccgacg tcgccgccac caaccgcatg ctcgaggcga tccgcgagac
      421 ctatgagctc tacgggttcg aagcggtcga gacgcctttc atcgaataca ccgacgcgct
      481 cgggaaattc ctgccggatc aggaccgccc gaacgagggc gtgttctcgt tccaggacga
      541 cgacgagcag tggctgtcct tgcgttacga cctcaccgcg cccctcgccc gctacgtggc
      601 ggagaatttt gacgccctgc ccaaacccta ccgcagctac cgcgccggct gggtgtttcg
      661 caacgagaag ccggggccgg gccgcttccg ccagttcatg cagttcgatg ccgataccgt
      721 gggcgcggcg agcgtcgccg cggatgccga gatgtgcatg atggcggccg acacgctgga
      781 gcgcgtcggc atccgacgcg gcgactacct gatcaaggtc aacaaccgca aggtgctcga
      841 cggcgtgctc gaagcgatcg ggctcggcgg cgagggcaag gccggccagc gtctcacggt
      901 tttgcgcgcc atcgacaagc tggatcgtct cgggaccgaa ggcgtgcgcc agctgcttgg
      961 cgagggccgc aaggacgaga gcggcgattt caccagaggt gcgcagctcg acggcaagtc
     1021 gatcgaccgg gtgctgcagt tcgtcgggca gacggagccc gccagggccg gctacgcggc
     1081 gaccctggac gtctggctcg gcctcgtccg cggcaccgtt ggtgaagaag gcatccagga
     1141 gctgcgcgac atcgccaccc tgctcgatgc ggccggctat catgatcgcg tcgcgatcac
     1201 ggccgaaacc gtgcgcgggc tcgaatatta taccggtccc gtatacgagg ccgagctgac
     1261 cttcacggtg gccaacgacg aaggccagcc ggtgcgcttc ggctcggtcg gcggcggcgg
     1321 tcgctatgac ggcctgatcg gccgcttccg ccccgagccg gtgccggcga cgggcttttc
     1381 gatcggcgtg tcgcgcctcc tcgccgcgct ccagacggtg agaagcccga tcgtggcgga
     1441 cgccgacgcg caaggcccgg tggtcgttct ggtgatggat cgcgaccgcg tcgccgatta
     1501 ccagcgcatg gtcgcgacct tgcgcaacgg cggcgtccgt gccgagctct atctcggcgc
     1561 gtccggcatg aaggcgcaga tgaaatacgc cgaccggcgg cgcagcccct gcgtcgtgat
     1621 ccagggctcc gacgaacgcg ccagaggcga ggtccagatc aaggatctgg cgctcggcgc
     1681 aacgctcgcc gcccgcggca aggaccgcgc ggattatttg gagaagacag cagaggcgca
     1741 gttctctact gccgaatcaa atctgttgtc tgcggtccgg caggtgcttg cccggaccgg
     1801 caagtaatct tgcgcccgga tcccggcgcc cgaccctctc cgaacacggc gccggacgca
     1861 aaatgctcgc ccccgaagga
//
LOCUS       DATAIQ010000379         2978 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_20533, whole genome shotgun sequence.
ACCESSION   DATAIQ010000379 DATAIQ010000000
VERSION     DATAIQ010000379.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2978)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2978)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2978
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20533"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..197)
                     /locus_tag="VHN20_06385"
     CDS             complement(<1..197)
                     /locus_tag="VHN20_06385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007564794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class III poly(R)-hydroxyalkanoic acid synthase
                     subunit PhaC"
                     /protein_id="HEX2725430.1"
                     /translation="MSDPNPIGIKPDQALSEAAALAEKMARGAKLFSEVRDEDVAIAT
                     TPKDEVWRQDKVVLYRYRPLA"
     gene            complement(194..1030)
                     /locus_tag="VHN20_06390"
     CDS             complement(194..1030)
                     /locus_tag="VHN20_06390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018263960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="poly(R)-hydroxyalkanoic acid synthase subunit
                     PhaE"
                     /protein_id="HEX2725431.1"
                     /translation="MDPLAYMRGLAELWGQGGKAFAAAQQSMFSEMAERAAKAAGVEQ
                     AVPNPAAGSADLAAANAAFAKLWMAATELSGTITSGLQKGEAPDPVVTQMLGHIFDPR
                     VWFSSTNDMDEALQRLSEGPRLADLWDVERKFLTVFNAWVALRRRSLEQNTVMLEAWM
                     RAAGAFARQLGDMADAGAKVESPREILTLWVETANDTMLETQRSEAFLRTQREVLKAS
                     TDLRLAQQEVAEFYSEMFGYPTRAELDDVHKTVTELRRELRALKRQARTAASERPAGS
                     RR"
     gene            complement(1032..2156)
                     /locus_tag="VHN20_06395"
     CDS             complement(1032..2156)
                     /locus_tag="VHN20_06395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004673287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent alcohol dehydrogenase family
                     protein"
                     /protein_id="HEX2725432.1"
                     /translation="MKIKAAVLNEMGAARPYADSRPLRIDEIELDRPGPGEVLVRIAA
                     AGLCHSDLSVIEGNRPRPMPMALGHEAAGVVEETGPGVDDLKRGDHVVMVFVPSCGHC
                     LPCSEGRPALCEPGAAANTAGTLLSGARRLHRNGQDVNHHLGVSGFAEYATVSRRSLV
                     KIDPDLPFDEAALFGCAVMTGVGAVINTAKVAAGSSVAVIGLGGVGLASLLGAIAAGA
                     RRVVAIDLSDDKLGLARQLGATDTFNAGSADAAGEVREATGGGVEYAFEMAGSVRAMD
                     LAYKITRRGGTTVTAGLPPPTHTFNIPQVNLVAEERTVKGSYIGTCVPTRDIPRYIEL
                     YRRGKLPVDRLMSDHLKLADINLGFDRLHEGKAVRQVVVI"
     gene            complement(2192..>2978)
                     /locus_tag="VHN20_06400"
     CDS             complement(2192..>2978)
                     /locus_tag="VHN20_06400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020095074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEX2725433.1"
                     /translation="QVIHVGYTPANVEEVYFPQAEVIGDVGPSLELLADRVEGKVKNA
                     KALLPLREGILGRITDRADEERFPPTPQRIVRDVRQVMPSDGIVALDNGMYKIWFARN
                     YRTYVANTLLLDNALATMGAGLPSAMMAKLLYPQRRVLAVCGDGGFMMNSQELETAVR
                     LKLDLVVLILDDSAYGMIRWKQAVDHFPDWGLTFGNPDFVKYAESYGAKGWRVGATED
                     LVPTLEAAFSQGGVHLVAVPIDYSENTRVLVDELSKRVPEPAE"
BASE COUNT          420 a         1030 c         1039 g          489 t
ORIGIN      
        1 tcggcgagcg gcctgtagcg gtagagcacg accttgtcct gccgccacac ctcgtccttc
       61 ggcgtggtcg cgatggcgac gtcctcgtcg cgcacctcgc tgaacagctt tgcgccgcgc
      121 gccatctttt cagccagcgc ggccgcctcg gacagggcct ggtcgggctt aatgccgatc
      181 gggttggggt cgctcatcgc ctgctccccg ctgggcgctc cgacgcggcc gtccgcgcct
      241 gccgcttcaa cgcgcgcaac tcgcggcgca gttcggtcac ggtcttgtgg acgtcgtcga
      301 gctcggcccg cgtcggatag ccgaacatct cgctgtagaa ctcggccacc tcctgctgcg
      361 ccaggcgcag gtcggtgctc gccttgagga cctcccgctg cgtgcgcagg aaggcctcgg
      421 agcgttgcgt ctcgagcatc gtgtcgttgg ccgtctcgac ccacagggtc aggatctcgc
      481 gcggcgattc gaccttcgcg ccggcgtccg ccatgtcgcc gagctgcctc gcgaaggcgc
      541 cggcggcgcg catccacgcc tccagcatga cggtgttctg ctcgaggctg cgccggcgca
      601 gcgcgaccca tgcattgaag accgtcagga acttgcgctc gacgtcccac aggtcggcga
      661 gacgcgggcc ttccgacagg cgctgcagcg cctcgtccat gtcgttggtc gacgagaacc
      721 agacgcgtgg atcgaagatg tgcccgagca tctgcgtgac gaccgggtcg ggcgcttcgc
      781 ctttctgcaa tccgctggtg atcgtgcccg acaactcggt cgccgccatc cacaatttgg
      841 cgaaggcggc gttggccgcg gcgagatcgg cggagccggc ggcgggattc ggcaccgcct
      901 gctcaacacc cgcggccttc gcggcgcgct cggccatctc cgagaacatg ctctgctgag
      961 ccgcggcgaa cgccttgccg ccctgtcccc acagctcggc aagcccgcgc atgtaggcga
     1021 gcgggtccat gtcagatcac caccacctgg cgcacggcct tgccctcatg cagccggtcg
     1081 aagccgagat tgatgtccgc gagcttgagg tgatcgctca tcaggcggtc gacgggcagc
     1141 ttgccgcgcc ggtagagctc gatgtagcgc gggatgtcgc gggtcggcac gcaggtgccg
     1201 atgtagctgc ctttgaccgt gcgctcctcg gccacgagat tgacctgcgg gatgttgaag
     1261 gtgtgcgtcg gcggcggcaa ccccgcggtc acggtcgtgc cgccgcgccg cgtgatcttg
     1321 taggcgaggt ccatggcgcg caccgagccg gccatctcga aggcgtattc gacgccgccg
     1381 ccggtcgcct cgcgcacctc gcccgcggcg tcggccgagc cggcgttgaa ggtgtcggtg
     1441 gcgccgagct ggcgcgccag cccgagcttg tcgtcggaca ggtcgatcgc gacgacgcgg
     1501 cgggcgccgg cggcgatcgc gccgagcagg gaggccaggc cgacgccgcc gaggccgatc
     1561 accgccacgc tcgagccggc ggcgaccttc gccgtgttga tgacggcgcc gacgccggtc
     1621 atcaccgcgc agccgaacag cgccgcctcg tcgaacggca ggtcgggatc gatcttgacg
     1681 agcgagcggc gcgagacggt ggcgtattcg gcgaagcccg agacgccgag atgatggttc
     1741 acgtcctgcc cgttgcggtg caggcgccgc gcgccggaca ggagcgtgcc ggcggtgttc
     1801 gccgccgcgc cgggctcgca caaggcgggc cggccttccg agcagggcag gcaatggccg
     1861 cagctcggga cgaagaccat gaccacgtgg tcgccgcgct tcagatcgtc gacgccaggt
     1921 ccggtctcct cgacgacgcc ggccgcctcg tggccgaggg ccatcggcat cggccgcggc
     1981 cggttgccct cgatcaccga caggtcggag tggcacaggc ccgccgccgc gatcctgacc
     2041 agcacctcgc cgggcccggg ccgatcgagc tcgatctcgt cgatcctcag cggcctcgag
     2101 tcggcatagg ggcgggcggc gcccatctcg ttgagcacgg cggctttaat cttcattggc
     2161 gtgtgctccg tcgggtcagg ctgcccggtc tctattcggc cggctccggc acgcgtttcg
     2221 acagctcgtc gacgaggacg cgcgtgttct cgctgtagtc gatggggacc gccacgagat
     2281 gcacgccgcc ctgcgagaag gccgcctcga gggtgggcac gagatcctcg gtggcgccca
     2341 cgcgccagcc tttggcgccg taggattcgg cgtatttgac gaaatccggg ttgccgaagg
     2401 tgaggcccca gtcggggaag tggtcgaccg cctgcttcca gcggatcatg ccgtaggccg
     2461 agtcgtcgag gatcagcacg acgagatcga gcttgaggcg caccgcggtc tcgagctcct
     2521 gcgagttcat catgaagccg ccgtcgccgc agaccgccag cacgcgccgc tgcggataga
     2581 gaagctttgc catcatggcc gagggcagcc ctgcgcccat ggtggcgagc gcgttgtcga
     2641 gcagcagcgt attggcgacg taggtgcggt agttgcgcgc gaaccagatc ttgtacatgc
     2701 cgttgtcgag cgccacgatg ccgtcgctcg gcatcacctg gcgcacgtcg cgcacgatgc
     2761 gctgcggggt cggcgggaag cgctcctcgt cggcgcggtc ggtgatgcgt cccaggatgc
     2821 cctcgcgcag gggcagcagc gccttggcgt tcttgacctt gccttcgacg cggtcggcca
     2881 gcagctcgag gctcgggcca acgtcgccga tcacctcggc ctgcggaaaa tacacttctt
     2941 ccacattggc cggcgtatag ccgacatgga tcacctgc
//
LOCUS       DATAIQ010000380         3616 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_20545, whole genome shotgun sequence.
ACCESSION   DATAIQ010000380 DATAIQ010000000
VERSION     DATAIQ010000380.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3616)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3616)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3616
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20545"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(68..1045)
                     /gene="rocF"
                     /locus_tag="VHN20_06405"
     CDS             complement(68..1045)
                     /gene="rocF"
                     /locus_tag="VHN20_06405"
                     /EC_number="3.5.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004053 - arginase activity [Evidence
                     IEA];
                     GO_process: GO:0019547 - arginine catabolic process to
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginase"
                     /protein_id="HEX2725434.1"
                     /translation="MSPNLADPRSARRLAILGAPIDIGASQPGAIMGPAALRTAGIVQ
                     NLRELGHAVEDQGDLAPPQPLALDPALSAARARNLAHIAAWSRLLSDRTYDIARTGAC
                     PIVLGGDHSLSIGTVNGVARHAREVGRELFVLWLDAHADFNTPATTPSGNMHGMSAAL
                     LAGEPGLEAVFGEHAGATIRPANLRLFGIRSIDRGERALLRARGVDVIDMRHIDEFGV
                     GVLMRGVLDAVAAAGALLHVSFDIDFLDPTVAPGVGTTVPGGATLREAHLVMELLYDS
                     GLVTSLDVVELNPFLDVRGHSALLLVDLIASLFGRQIIERETTPNFVLP"
     gene            1200..1610
                     /locus_tag="VHN20_06410"
                     /pseudo
     CDS             1200..1610
                     /locus_tag="VHN20_06410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018262866.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0010257 - NADH dehydrogenase complex
                     assembly [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone oxidoreductase subunit NDUFA12"
     gene            complement(1727..2536)
                     /locus_tag="VHN20_06415"
     CDS             complement(1727..2536)
                     /locus_tag="VHN20_06415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012497166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HEX2725435.1"
                     /translation="MIRVGVGGWTYEPWRGTFYPPKLPQAQELSYASRQLTSIEINGT
                     FYRTQTPASYRKWAGETPDGFVFALKGSRYVTNRAQLAEAGPSITRFLESGLTELGDK
                     LGPILWQFAPTKKFDGQDFGAFLDLLPKQMDGRAIRHVVEVRHMSFAVPEFITLLRRH
                     DVPVVYADADEFPAIPDVTGDFVYARLQRSAEDEETGYAPDALAQWARRFKAWSDGGE
                     PDDLPRIGPPVAANGVKPRDCFVYFIAGAKVRAPAAAKAFIERIGTAAPPS"
     gene            complement(2574..3482)
                     /locus_tag="VHN20_06420"
     CDS             complement(2574..3482)
                     /locus_tag="VHN20_06420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013167072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase family protein"
                     /protein_id="HEX2725436.1"
                     /translation="MKQLIVRHSTVYRYARPVTFGPHRLMLRPRDSHDLRLGRTELTL
                     SPPARLRWLHDVYGNSVAIADFTGEAAELRIESLLHLERYALDRPVFDLEADAATYPF
                     VYSSEDRTDLGRLLERHTPDPNGVIDGWARGFVKEKQADTLALLAHINSNIKEQLAYE
                     PRNEEGTQTPIETLERGSGTCRDFAFLMIEAVRSLGFGARFVTGYLYDPKLDAGGDDG
                     TRGAGATHAWCEIYLPGAGWVEYDPTNAIIGGAALIRVAVTRDPSQASPISGSFDGGP
                     GDYQGMSVEVTVTSADPQAPAQIAAE"
BASE COUNT          532 a         1227 c         1337 g          520 t
ORIGIN      
        1 cgcttgagca gccggccgcg ctgcccggat gccgcctttg cctcgccacc ccgtctcccc
       61 ggcggcctca gggcaggacg aaattgggcg tcgtctcgcg ctcgatgatc tggcggccga
      121 acaggctggc gatcaggtcg acgagcagca gggcgctgtg gccgcggacg tcgaggaagg
      181 ggttgagctc gaccacatcg agcgaggtga cgagacccga atcgtagagc agctccatca
      241 ccagatgcgc ctcgcgcaag gtggcgccgc cgggcaccgt cgtgccgacg cccggcgcca
      301 cggtcgggtc gaggaagtcg atgtcgaagc tgacatgcag cagggcgccg gcggccgcca
      361 ccgcgtcgag cacgccgcgc atcagcaccc cgaccccgaa ctcgtcgatg tggcgcatgt
      421 cgatcacgtc gacgccgcgg gcgcgcagca gcgcgcgctc gccgcggtcg atcgagcgga
      481 tgccgaacag gcgcaggttg gcgggccgga tggtcgcgcc cgcatgctcc ccgaacaccg
      541 cctcgagccc gggctcgccg gcgagcagcg ccgccgacat gccgtgcatg ttcccggacg
      601 gggtggtggc cggggtgttg aagtcggcat gcgcgtcgag ccacagcacg aacagctcgc
      661 ggccgacctc gcgggcatgc cgggcgaccc cgttgaccgt gccgatcgac aggctgtggt
      721 cgccgccgag cacgatcggg caggcgccgg tgcgggcgat gtcgtaggtg cggtcgctga
      781 ggaggcgcga ccaggcggcg atatgggcaa ggttgcgcgc tctcgcggcc gacagcgcgg
      841 ggtccagcgc cagcggctgc ggcggcgcaa ggtcgccctg gtcctcgacc gcatggccga
      901 gctcgcgcag gttctgcacg atgccggccg tgcgcaaggc ggcgggcccc atgatggcgc
      961 cgggctggct ggcgccgata tcgatcggcg cgcccaggat cgcgaggcgc cgggcgctgc
     1021 gcgggtcggc caggttcggc gacatcaacg actccatccg ccgttcgggt cccgcgcgtt
     1081 ataatcggtc ccaccgcggc gcgacaccgg cgcgaccggc gccgcacgct tcactgcgcc
     1141 gctggacagg gcggcgccgc gccgccataa ctcgcgcgcc tttctcgaag cggacagcca
     1201 tgacgttcaa ggaattcctg ctgcggacct tcacctggtg gaacggaacc acgtggggca
     1261 cgtcgttcta cacctggcgg cacgggcagt tcgtcggcga ggacgaactc ggcaaccgct
     1321 actaccaggc ggcggggccc ttgatcgatc cgtcggtcgg cccgcgacgg cgctgggtgg
     1381 tctacaacgg cgaggccgac gcctcaaagg ttccgcccgg ctggcgcggt tggctggcct
     1441 tcacggcgga ggtggctccg agcgaagaga gctacgtgcc gcgcacctgg gaattgccgc
     1501 accggccgaa catgacgggc acgccgtatg cctatcgccc ggccggctcg atcatgcggg
     1561 aggacgggcg gcggccggaa gcgaccggcg attacgtgcc gtggtcgccg gacgggccgg
     1621 cgcgccacga gccggacgac cactcgccgc accccggcgc ccgccgcgac ctcgcccacg
     1681 gctgaggcgg ctcggcgctc gccacgccgc gcgccgcagc gattgcctat gacggcgggg
     1741 ccgccgtgcc gatccgctcg atgaaggcct tcgcggcggc aggcgcgcgc accttggcgc
     1801 cggcgatgaa atagacgaag cagtcgcgcg gcttgacgcc gtttgccgcg acgggcgggc
     1861 cgatgcgcgg caggtcgtcc ggctcgccgc cgtcgctcca cgccttgaac cgccgcgccc
     1921 attgcgccag cgcgtcgggc gcgtagccgg tctcctcgtc ctcggcggag cgctgcaggc
     1981 gcgcatagac gaagtcgccg gtcacgtcgg ggatggccgg aaactcgtcg gcgtcggcgt
     2041 agacgacggg cacgtcgtgg cggcgcagca gggtgatgaa ctcgggcacg gcgaagctca
     2101 tgtgccgcac ctcgaccaca tggcggatgg cgcggccgtc catctgcttc ggcagcaggt
     2161 cgaggaaggc gccgaaatcc tgcccgtcga atttcttcgt cggtgcgaac tgccacagga
     2221 tggggccgag cttatcgccg agctcggtca ggccgctctc gaggaagcgc gtgatcgacg
     2281 gcccggcttc cgcgagctgc gcgcggttgg tgacgtagcg cgagcctttc agcgcgaaca
     2341 cgaagccgtc gggcgtctcg ccggcccatt tgcggtagct ggccggggtc tgcgtgcgat
     2401 agaaggtgcc gttgatctcg atcgaggtga gctgccggct ggcatagctc agctcctggg
     2461 cctgcggcag cttgggcgga tagaacgtgc cccgccaggg ctcataggtc cagccgccaa
     2521 cgccgacgcg gatcatacgc aactccactc cacaacggcc ggcgagcgaa cgcctactcg
     2581 gcggcgatct gcgcgggcgc ctgcgggtcg gcgctggtca ccgtgacctc gacgctcatg
     2641 ccctggtagt cacccggccc gccgtcgaag ctacccgaaa tcggcgacgc ctgcgaggga
     2701 tcacgggtca cggcgacgcg gatcagcgcg gcgccgccga tgatcgcgtt ggtggggtca
     2761 tattcgaccc agccggcgcc cggcaggtag atctcgcacc aggcatgcgt ggcgccggcg
     2821 ccgcgcgtcc cgtcgtcgcc gccggcgtcg agcttcggat cgtagagata gccggtgacg
     2881 aagcgcgcgc cgaagccgag gctgcgcacc gcctcaatca tcaggaaggc gaagtcgcgg
     2941 caggtgccgc tgccccgttc gagcgtctcg atcggcgtct gcgtgccttc ctcgttgcgc
     3001 ggctcgtagg cgagttgctc cttgatgttg ctgttgatgt gggcgagcag ggccagcgtg
     3061 tcggcctgct tctccttcac gaagccgcgc gcccagccgt cgattacgcc gttgggatcg
     3121 ggcgtatggc gctcgagcag gcggccgaga tcggtgcggt cctcgcttga atagacgaac
     3181 gggtaggtgg ccgcgtccgc ctcgagatcg aagacgggcc gatcgagggc atagcgctcg
     3241 agatggagca agctttcgat gcgcagctcg gcggcctcgc cagtgaaatc ggcgatggcg
     3301 accgagttgc cgtacacgtc gtgcagccag cgcaaccggg ccggcggcga cagggtcagc
     3361 tcggtccgcc ccaggcgcag gtcgtggctg tcgcgtgggc gcagcatcag gcggtgcggc
     3421 ccgaaggtca ccggacgagc gtagcggtag acggtggaat ggcggacgat cagttgtttc
     3481 atgcggggat ctgggactgc ctgccgccgg tcatggatgc gagaagttat gcggccgggg
     3541 cggagattga accgccccat gcgccggatg ttccctggcc gcccggatcc ggcccgggac
     3601 aggggcggag ctgccc
//
LOCUS       DATAIQ010000381         4468 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_389574, whole genome shotgun sequence.
ACCESSION   DATAIQ010000381 DATAIQ010000000
VERSION     DATAIQ010000381.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4468)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4468)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4468
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_389574"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1..240
                     /gene="mraY"
                     /locus_tag="VHN20_06425"
                     /pseudo
     CDS             1..240
                     /gene="mraY"
                     /locus_tag="VHN20_06425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015931917.1"
                     /note="First step of the lipid cycle reactions in the
                     biosynthesis of the cell wall peptidoglycan; incomplete;
                     partial in the middle of a contig; missing N-terminus and
                     C-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
     gene            558..1616
                     /locus_tag="VHN20_06430"
     CDS             558..1616
                     /locus_tag="VHN20_06430"
                     /inference="COORDINATES: protein motif:HMM:NF024739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX2725437.1"
                     /translation="MAYSRRSLLGAGALGLAGAATSRLPAFAQTPPASGQTPSWIVPE
                     LLQAARAEGSLTIYSSMNEQEGLPLWKLFEDATGIKTTYVRSSDTALMGRIAIERRAQ
                     QHSWDLVQTTAVGKLPQDFLQAFDAPEAKNVIPEARAANRRWYGVYANYNSPAYNTNF
                     VKESELPKSYEEFAERKQWAGKVAIDGTDTEWLAAMFAHFGEERARKILKDIVAALKP
                     VVVEGHLALARSVAAGEYWVALNNYVPLTYNQKLAGGPTDVWILDPVALFFGQGGINS
                     NAPHPKAALLGANFMMSREGQQQMTKAGRIPVRADVTPNPPDVVTRVQKHKVIAYSFA
                     ADQEKRLERSFQEIFKPR"
     gene            1648..3456
                     /locus_tag="VHN20_06435"
     CDS             1648..3456
                     /locus_tag="VHN20_06435"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HEX2725438.1"
                     /translation="MTKGDIVERHVAAVDTSLRSSSGMLRLRPSWFRLSAAHLVGIGF
                     VAVTAWLVVVPLAGLFLTAFSEDTPYGPGEATLQNFAEAYSSWHLSQLFWTSFVFATG
                     SAVLTLIMGGLVAWAVERTDMPGRGLFHSLTLLTFAIPGLLTTMAWTLTLSPNIGWAN
                     AVLRDVFGLSSAPFNIYSMGGMIWALSTHYFPLAYLLLGPAFRTLDMRMEEAALMAGA
                     HQGQILRRVTLPLMRPAILSALLLLFIRGIESFEVPRILGTPARIEVFTTDIAAAIRR
                     APPEFGIASALSLTLLTICILAVYLYRRAVQNAEAFATITGKGYTPTPFRLGRWRWPA
                     AIGVGALFAIGLGLPLFTLVWQSLFAKMAQPFAATAEPVTAANYKFVLTYPIFAEAVR
                     TSVTLGAMAATLIVTITFVIAWIAQRVARRYGWLLDLLVFMPIAVPSVIIGASVLFAY
                     LILPIPVYNTIWILLIAYLTAYLPYGIRFASGGIAQLHKELEEAGKMAGAGYGQIFRR
                     ILLPLLAPVAISAWLYIFVLAVRELGASLMLVGPGTHVLGTITLTMWEEGGSYGAVCA
                     LGVIQIIPLIAIVAVLRHLENRMARSAQGMAGVQTP"
     gene            3577..4461
                     /locus_tag="VHN20_06440"
     CDS             3577..4461
                     /locus_tag="VHN20_06440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012248413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEX2725439.1"
                     /translation="MRICRYDDDRLGVVIGDMVHDVSAAQEQIRAGARYDMKGDAVIA
                     ALPAWRGRLEEMAAKAPGKPLAQVRLLAPVARPSKVMAAPTNYRKHIEEMRVKRENEG
                     LMAKRSSDIGEAGIFLKANSAIVGPSEGIPLRFPDRRNDHEVELVVIIGKEGSDIPRA
                     RALDYVAGYCLGLDMTVRGPEDRSFRKSVDGYAPMGPWMVTADEIPNPNDVAMTLHVN
                     DDLRQQPNTRDMIYDVERLIEFASSFYTLYPGDVYFTGTAEGVGPVKPGDWITTRCGP
                     IGEMKIEVRAHDAATRAA"
BASE COUNT          707 a         1530 c         1464 g          767 t
ORIGIN      
        1 ctgctctggg cgaatctctc caattcctac gtgtgggccg cagtcgcggc gggcttggga
       61 gcgagcggcc tgtacgatgg cgatcgttcg ctcggcctgg tcatggtcgc cgctgccgtg
      121 accgggctcc tcggctacct cgctggcaac gtgatcatgg cgaattacgt gcgcctcccg
      181 ttcgttcccg gcgccggtga gctggcagtc gtttgcgggg cgctcatcgg tgcggggctc
      241 ccggtccttg cgcatcgcgt ctgattgccg gcaagggccg agcgacatcg cctcatgaag
      301 caagatcgtc tcgacggcag gatgcactga caccttcacg tgtgatggcc gggcttggtg
      361 tccctttagg gcctggacag cgtgaagcgc cgatccgggt acggccaccc cgatcggaag
      421 ggctgaggtc cagacgatcg agatcaccgg cacaaggccg gtgatgacga cgcggtgggc
      481 ggcaccggcg cttgtgcgcg tgtcggggcg cttgtatgaa cgctgccaac gacttgcaaa
      541 aaccagggag gagcacagtg gcttacagcc ggaggtcctt gttaggcgcg ggcgcactcg
      601 gcctcgcggg ggcggcgacg tcgcggttgc cggccttcgc ccagacgccg ccggcgtcgg
      661 gacagacgcc gtcctggatc gttccggagc tattgcaggc ggcgcgcgcc gagggctcgc
      721 tgacgatcta ttcgtcgatg aacgagcagg aaggcctgcc gctctggaag ctgttcgagg
      781 acgcgaccgg catcaagacc acttatgttc gctcctcgga cacggcgctg atgggccgca
      841 tcgccatcga gcggcgcgcg cagcagcatt cgtgggacct cgtgcagacg accgccgtcg
      901 gcaagctgcc gcaggatttc ctgcaggcct tcgacgcgcc cgaggcgaag aacgtcattc
      961 cggaagcgcg cgccgcgaac cggcgctggt acggcgtcta cgccaactac aactcgcccg
     1021 cctacaacac caacttcgtc aaggaatccg agcttccgaa gagctacgag gaattcgccg
     1081 agcgcaagca atgggccggc aaggtcgcca tcgacggcac cgacaccgag tggctggcgg
     1141 cgatgttcgc gcatttcggc gaagagcggg cgcgcaagat cctcaaggac atcgttgccg
     1201 cgctgaagcc ggtcgtcgtc gagggccatc tggcgctggc gcgctcggtc gccgccggag
     1261 aatattgggt cgcgctcaac aactacgtgc cgctgaccta caaccagaag ctcgcgggcg
     1321 gcccgaccga cgtctggatc ctcgacccgg tggcgctgtt cttcggccag ggcggcatca
     1381 acagcaacgc cccgcacccc aaggccgcgc tcctcggcgc caatttcatg atgagccggg
     1441 agggccagca gcagatgacc aaggcgggcc ggattccggt gcgcgccgac gtgacgccga
     1501 acccgcccga cgtcgtcacc cgtgtgcaga agcacaaggt catcgcctac agtttcgctg
     1561 ccgaccagga gaaacggctc gagcgcagtt tccaggagat cttcaagccg cgatgacccg
     1621 tgacgtcggc aggagcgccc gccacccgtg accaagggcg acatcgtgga gcgccatgtg
     1681 gccgccgtcg acacatccct gagatcgtct tcggggatgc tgcgcttgcg cccgtcatgg
     1741 ttccggctct cggcggcgca tctcgtcggc atcggcttcg tcgccgtgac cgcctggctg
     1801 gtggtcgtcc ccctggccgg gctgttcctc accgccttca gcgaggacac gccttacggg
     1861 ccgggcgagg cgaccctgca gaacttcgcc gaggcctatt cgagctggca tctgtcgcag
     1921 ctgttctgga cctcgttcgt attcgcgacc ggcagcgccg tcctgacgct gatcatgggc
     1981 ggtctcgtcg cctgggcggt cgagcgcacc gacatgccgg ggcgcggcct gttccacagc
     2041 ctgacgctcc tgaccttcgc catcccgggg ctgctcacga cgatggcgtg gacgctcacg
     2101 ctgagcccca atatcggctg ggccaacgcc gtcctgcgcg acgtgttcgg attgtcgtcg
     2161 gcgccgttca acatctactc gatgggcggc atgatctggg cgctgtcgac gcactatttc
     2221 cccctcgcct atctcctgct cgggccggcc ttccgcaccc tcgacatgcg catggaggag
     2281 gcggcgctga tggccggcgc gcaccagggc cagatcctca ggcgcgtgac gctgcccctg
     2341 atgcgtccgg cgatcctgtc ggcgctgctg ctgctgttca ttcgcggcat cgaatccttc
     2401 gaggtgccgc gcatcctcgg cacgcccgcg cgcatcgagg tgttcaccac cgacatcgcc
     2461 gcggccatcc ggcgggcgcc gcccgaattc ggcatcgcca gcgcgctgag cctgacgctg
     2521 ctgaccatct gcatcctcgc cgtttatctc taccgccgcg ccgtgcagaa tgcggaggcc
     2581 ttcgccacca tcaccggcaa gggctacacg ccgacgccgt tccgcctcgg gcgctggcgc
     2641 tggccggcgg cgatcggtgt cggcgcgctg ttcgcgatcg gcctcggcct gccgctcttc
     2701 acgctggtgt ggcagtcgct gttcgccaag atggcgcaac cattcgccgc cacggccgag
     2761 ccggtcaccg ccgccaacta caaattcgtg ctgacctatc cgatcttcgc ggaagcggtg
     2821 cggacgagcg tcacgctcgg cgccatggcg gccaccctga tcgtcacgat caccttcgtg
     2881 atcgcgtgga tcgcgcagcg cgtcgcccgg cgctacggct ggttgctcga cctcctcgtc
     2941 ttcatgccga tcgcggtgcc gagcgtgatc atcggcgcca gcgtgctgtt cgcctatctg
     3001 atcctgccga tcccggtcta caacaccatc tggatccttc tgatcgccta cctgaccgcg
     3061 tatctgccct acggcatccg gttcgcgtcc ggcggcatcg cccagctgca caaggagctg
     3121 gaagaggccg gcaagatggc cggcgccggc tacggccaga ttttccggcg catcctgctg
     3181 ccgctgctcg cgcccgtagc gatctccgcc tggctctaca tcttcgtgct ggcggtgcgc
     3241 gagctcggcg catcgctgat gctggtcggg cccggcacgc acgtgctcgg cacgatcacg
     3301 ttgacgatgt gggaggaagg cggcagctac ggcgccgtgt gcgccctcgg cgtcatccag
     3361 atcataccgc tgatcgccat cgtcgccgtg ctgcgtcacc tcgagaaccg catggcccgg
     3421 tcggcgcaag gcatggccgg agtgcaaacc ccttagagcg ggatcaattc agattgaacc
     3481 gatcccgctc tatttcttat tgaaccgcat gatcttttcg gggaagcggt gtccacttcg
     3541 ccggatcatg ctccaaacca aggataggat cgattcatgc gcatttgtcg ctacgatgat
     3601 gaccggctcg gcgtcgtgat tggtgacatg gtccacgacg tcagcgccgc ccaggagcag
     3661 atccgcgccg gcgcgcgtta cgacatgaag ggcgacgcgg tgatcgccgc cctccccgcc
     3721 tggcgtgggc gcctcgagga gatggccgcc aaggcgcccg gcaagccgct cgcgcaggtg
     3781 cgcctgctgg cgccggtggc gcggccgtcg aaggtgatgg cggcgccgac caactaccgc
     3841 aagcatatcg aggaaatgcg cgtcaagcgc gagaacgaag gcctgatggc caagcgctcg
     3901 tccgacatcg gcgaggccgg gatcttcctc aaggccaact cggcgatcgt cggcccgtcg
     3961 gagggcattc cgctgcgctt cccggaccgg cgcaacgacc acgaggtcga gctcgtcgtc
     4021 atcatcggca aggagggcag cgacatcccg cgggcgcgcg ccctcgatta cgtggccggc
     4081 tattgcctcg gcctcgacat gacggtgcgc ggccccgagg accgcagctt ccgcaagtcc
     4141 gtggacggct atgcgccgat gggcccctgg atggtgacgg ccgacgagat cccgaacccg
     4201 aacgacgtcg ccatgacgct gcacgtcaac gacgacctgc gccagcagcc gaacacccgg
     4261 gacatgatct atgacgtcga gcggctgatc gagttcgcct cgtcgttcta cacgctctat
     4321 ccgggcgacg tgtatttcac cggcaccgcc gagggcgtcg gcccggtcaa gccgggcgac
     4381 tggatcacga cgagatgcgg cccgatcggc gagatgaaga tcgaggtgcg ggcgcacgac
     4441 gcggccaccc gggccgcctg aatcccga
//
LOCUS       DATAIQ010000382         3207 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_55393, whole genome shotgun sequence.
ACCESSION   DATAIQ010000382 DATAIQ010000000
VERSION     DATAIQ010000382.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3207)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3207)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3207
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_55393"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..770
                     /locus_tag="VHN20_06445"
     CDS             <1..770
                     /locus_tag="VHN20_06445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007008774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX2725440.1"
                     /translation="LLDQPGLNIGYLAYNTTKKPFDDVRVRKAINMAINKKAIIDAVY
                     LTTGVAAKNPIPPSMWSYNDAIQDDPYDPEGAKKLLAEAGFPNGMETDLWAMPVQRPY
                     NPNAKRIAELMQADLAKVGVKAEIKSFEWGEYRKRLQAGEHQMGMLGWTGDNGDPDNF
                     LHTLLGCDSAKGASGSNIAKFCHQPYDDLVVKAKRISDQGERAKLYQQAQVIFKQQAP
                     WFTIAHAVQLKPVRKEVVDFKLSPFGRHNFYGVDIKQ"
     gene            795..1805
                     /locus_tag="VHN20_06450"
     CDS             795..1805
                     /locus_tag="VHN20_06450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015668865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX2725441.1"
                     /translation="MLRFILTRVSLVIPTFIGITLLAFLLVRLIPGDPIETLAGERGI
                     DPERHAALRKEFGFDQPLLVQYGIYISQLLRGDFGRSVITREPVMSEFLTLFPATVEL
                     ATCAILFALLLGIPAGIIAAVRRNSVFDHGVMGISLTGYSMPIFWWGLLLILLFSVQL
                     GWTPVSGRIAVQYFIEPVTGFLLVDTLLSDEKGAFGSAVSHLVLPTIVLGTVPLAVIA
                     RMTRSAMLEVLGEDYIRTARAKGLAPARVVGLHALRNALIPVVTVIGLQIGVLATGAI
                     LTETIFSWPGVGKWLIEAINRRDYTVLQGGTLLIGIVVMSVNLFVDLLYGLINPRIRH
                     TR"
     gene            1802..2713
                     /locus_tag="VHN20_06455"
     CDS             1802..2713
                     /locus_tag="VHN20_06455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011924846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX2725442.1"
                     /translation="MTAEVLEAPPTAAPTATPPHPLREFWSYFSANHGAVAGLVIIVA
                     VLVVALLADVIAPHAPNLTNSAAFLKPPFWQEGGSLTYPLGTDAIGRDILSRLIHGAR
                     LSLAIGIAVVAISILAGIVLGLVAGFFRGLAEIVIMRLMDIILTLPSLLLAIVIVAIL
                     GPGLMNAMLAVAVVVLPHYVRITRAAVIAERSKDYVTAAKVSGAGTLRLMFKEVLPNC
                     TAPLIVQASLGVSTAILDAAALGFLGLGAQPPASEWGTMLADAREFVLRAWWVVTFPG
                     LAILITVLAFNLLGDGLRDAFDPKLKR"
     gene            2716..>3207
                     /locus_tag="VHN20_06460"
     CDS             2716..>3207
                     /locus_tag="VHN20_06460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018234749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2725443.1"
                     /translation="MALLEIDDLSVSFPTSSGELRAVDGVSLTLEEGEVLGVVGESGS
                     GKSVSMLALMGLVPYPGRVRAKRLAFAGRDLLTMRDADRRQIAGKDIAMIFQEPTTSL
                     NPCFTIGFQLVETLRLHEGMDRKAARRRAVELLEQVGIPDPGHNVNRYPHELSGGMRQ
                     RVLI"
BASE COUNT          505 a         1144 c         1005 g          553 t
ORIGIN      
        1 agctgctcga ccagcccggc ctcaatatcg gctacctggc ctacaacacc acgaagaagc
       61 cgttcgacga cgtgcgcgtg cgcaaggcca tcaacatggc catcaacaag aaggcgatca
      121 tcgacgcggt gtacctcacc acaggtgtgg ccgcgaagaa cccgatcccg ccctccatgt
      181 ggtcgtacaa cgacgctatc caggacgatc cctacgatcc ggaaggggcc aagaagctgc
      241 tcgccgaagc cggcttcccg aacggcatgg aaacggacct gtgggcgatg ccggtgcagc
      301 ggccctacaa ccccaatgcc aagcgcatcg ccgagctcat gcaggccgac ctcgccaagg
      361 tcggcgtcaa ggccgagatc aagtccttcg agtggggcga ataccgcaag cgcctgcagg
      421 cgggcgaaca ccagatgggc atgctcggct ggaccggcga caacggcgac ccggacaact
      481 tcctgcacac cctgctcggc tgcgactcgg ccaaaggcgc cagcggctcg aacatcgcca
      541 agttctgcca tcagccctac gacgacctcg tcgtcaaggc gaagcgcatc tcggaccagg
      601 gcgagcgcgc caagctctac cagcaggcgc aggtgatctt caaacaacag gcgccgtggt
      661 tcaccatcgc gcatgcggtg cagctcaagc ccgtgcgcaa ggaagtggtc gacttcaagc
      721 tcagcccctt cggccggcac aatttctacg gtgtcgacat caagcagtaa gcagcatgtc
      781 gtgatgcggc gatcatgctg cgcttcatcc tgacgcgcgt cagcctggtg atcccgacct
      841 tcatcgggat caccctgctc gccttcctgc ttgtccggct gatcccgggc gatcccatcg
      901 agacgctggc cggcgagcgg ggcatcgacc cggagcgcca cgccgccctg cgcaaggaat
      961 tcggcttcga ccagccgctc ctcgtgcaat acgggatcta catctcgcag ctgctgcgcg
     1021 gcgatttcgg ccgctcggtg atcacgcgcg agccggtcat gtccgagttc ctcacgctgt
     1081 tcccggcgac cgtggagctc gcgacctgcg ctattctgtt cgcgctgctg ctcgggatcc
     1141 cggccggcat catcgccgcc gtgcgccgta attcggtgtt cgaccacggc gtcatgggca
     1201 tctcgctgac cggctattcg atgccgatct tctggtgggg cctgctgctg atcctgctgt
     1261 tctccgtgca gctcggctgg accccggtat cgggccgcat cgccgtgcaa tatttcatcg
     1321 agccggtgac ggggttcctg ctggtcgaca ccctgttgtc cgacgagaaa ggcgcgttcg
     1381 gctcggcggt ctcgcacctc gtcctgccga ccatcgtgct cggcacggtg ccgctcgcgg
     1441 tgatcgcgcg catgacgcga tcggctatgc tcgaggtcct cggcgaggac tacattcgca
     1501 ccgcccgggc gaaaggcctc gcgccggcgc gcgtcgtcgg cctgcacgcc ttgcgcaacg
     1561 ccctgatccc cgtcgtgacg gtgatcgggc tgcagatcgg cgtgctcgcc acgggcgcca
     1621 tcctgacgga gacgatcttc tcgtggccgg gcgtcggcaa atggctgatc gaggcgatca
     1681 accggcgcga ctacacggtg ttgcagggcg gcacgctgct gatcggcatc gtggtgatga
     1741 gcgtgaacct gttcgtcgac ctgctctacg gcctcatcaa cccgcgcatc aggcacacgc
     1801 gatgaccgcc gaagttctcg aagccccgcc gaccgcggcg ccgaccgcga cgccgccgca
     1861 tccgctgcgc gagttctgga gctatttcag cgccaatcac ggcgccgtcg ccgggctcgt
     1921 gatcatcgtc gcggtgctgg tcgtggcgct gctggcggac gtgatcgccc cgcatgcgcc
     1981 caacctcacc aacagcgccg ccttcctgaa accgccgttc tggcaggagg gcggctccct
     2041 cacctatccg ctcggaaccg acgcgatcgg ccgcgacatc ctctcgcgcc tgatccacgg
     2101 cgcgcggctg tcgctcgcca tcggcatcgc cgtcgtggcg atctcgatcc tcgccggcat
     2161 cgtgctcggg ctggtcgccg gattcttccg cggtctcgcc gagatcgtga tcatgcggct
     2221 catggacatc atcctgacgc tgccgagcct cctgctcgcc atcgtcatcg tggcgatcct
     2281 cggccccggg ctcatgaacg cgatgctcgc cgtcgcggtg gtggtgctgc cgcattacgt
     2341 gcgcatcacg cgcgccgccg tgatcgccga gcgctccaag gattacgtaa cggccgccaa
     2401 ggtcagcggc gccggcacgc tgcgcctgat gttcaaggag gtgctgccga actgcacggc
     2461 gccgctgatc gtgcaggcct cgctcggcgt ctcgaccgcg atcctcgacg ccgccgccct
     2521 cggcttcctc ggcctcggcg cgcagccgcc cgcctcggaa tggggcacga tgctggccga
     2581 cgcgcgcgag ttcgtgctgc gggcgtggtg ggtcgtgacc ttccccggcc tcgccatcct
     2641 gatcaccgtg ctcgccttca acctgctcgg cgacggcctg cgcgacgcct tcgatccgaa
     2701 gctgaagcgc tgaccatggc cctcctcgag atcgatgacc tcagcgtcag cttcccgacc
     2761 tcgagcggcg agctgcgcgc cgtcgacggc gtcagcctca cgctcgagga aggcgaggtg
     2821 ctcggcgtcg tcggcgagtc gggctccggc aagagcgtgt cgatgctggc gctgatgggc
     2881 ctcgtcccgt atccgggccg cgtcagggcg aagcgcctcg ccttcgcggg gcgcgacctc
     2941 ctcaccatgc gcgatgccga tcggcgccag atcgccggca aggacatcgc catgatcttt
     3001 caggagccga cgacaagcct caacccgtgc ttcacgatcg gcttccagct cgtcgagacc
     3061 ttgcgcctgc acgagggcat ggatcgcaag gcggcccgcc ggcgcgcggt cgagctcctc
     3121 gagcaggtcg gtattcccga tccagggcac aacgtaaacc gctatcccca cgagctctcg
     3181 ggtggcatgc gccagcgcgt gctcatc
//
LOCUS       DATAIQ010000383         2812 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_148192, whole genome shotgun sequence.
ACCESSION   DATAIQ010000383 DATAIQ010000000
VERSION     DATAIQ010000383.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2812)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2812)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2812
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_148192"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..286)
                     /locus_tag="VHN20_06465"
     CDS             complement(<1..286)
                     /locus_tag="VHN20_06465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003509369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HEX2725444.1"
                     /translation="MRVMVIVKASKDSEAGVLPSQELLTDMGQFNEELVKAGVMLAGE
                     GLHPSSKGVRVSFGNDPTLKKGPFGNTEELVAGFWLWQVKSLEEAIQWLKR"
     gene            510..>2812
                     /locus_tag="VHN20_06470"
     CDS             510..>2812
                     /locus_tag="VHN20_06470"
                     /inference="COORDINATES: protein motif:HMM:NF024589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX2725445.1"
                     /translation="MSERSKFCSECGAPLPRPCPACGQRSPPSAKFCFECGTSLGDGV
                     VPRPADGGAREAAAVPATAERRQVTVMFCDVVGSTTLATRLDPEDLREIVNAYHLCVA
                     KTVARYHGYIARTMGDGVMAYFGYPQAREDDVERAVRASLALVEAVAGLDAPERLQVR
                     IGLDTGRVVVGDLIRAGEASERGILGETPNRAARLQAIAEPNSVVVGPGARPLLGDLF
                     EYRDLGSLELKGFSEPISAFRVLGPSTIESRFEALHAATLAPLIGRDEEIELLERRWQ
                     RAKTGAGQVVLVSGEPGIGKSHLISAMLEQIASEPHSRLRYFCSPHHTHSALYPMIRE
                     LERAAGFARDDTANSKLAKLAALLSHTCAPDDDVELLAELLSVRGEGQRPEPGGTPEQ
                     RKQRTLQALIRRIEALSQERPVLMLLEDAQWIDPTSLEVMDRFVQRARQLPVLVVMTF
                     RPEFTPSWAGQPHVTLRTLSRLDQTEGAALIDRIAGERRLPPDVVGEILERTDGVPLF
                     IEELTKAVVDARAAVSRPPPGTGAGLVIPATLDALLMARFDRLDATAKEAAQIGAAIG
                     REFSYELLAAVGRTSDRDLSGALRQLVGTGLLSAWGEPPEATYLFKHALVQDASYRTM
                     LRSRRRELHARIVAVLEARHPAVVEQQPDLLAHHCRQADLPEKAIAYWERAGQKSLAR
                     SASTEAAAQLRKALQLLSTLPDNRERRQQELGLQSTLAAALVASRGNAASETGESYTR
                     ARELCEELGETSALTPVLSGLSTYHQTR"
BASE COUNT          422 a         1001 c          945 g          444 t
ORIGIN      
        1 cccgcttgag ccactggatc gcctcttcga gcgacttgac ctgccacagc cagaagccgg
       61 cgaccagctc ctcggtgttg ccgaaggggc ctttcttcag ggtagggtcg ttgccgaagc
      121 tcacgcgcac gcccttggag ctcgggtgca gcccttcccc ggccagcatg acgccggcct
      181 tcaccaactc ctcgttgaac tggcccatgt cggtcagcag ctcctggctc ggcagcacac
      241 cggcctcgga gtccttgctg gccttgacga tcaccatgac gcgcattgtc gtttctcctc
      301 gccggcagcc ccggcctggt ggttggctgc tgctccctta acagacgaac ggcgcaagcc
      361 ggagccgaca cccgcaagcc gcaacggcgg tgactttttt cgggatcgcg gctgcccgag
      421 aaaccatttt gctcggccgc ccgtgtgcta tggtccgctc ctcgaccgca tgccggtgcc
      481 gcatggactg cccgaactgc caggcgaccg tgtccgaacg gagcaagttc tgctccgaat
      541 gcggcgcgcc gctgccgcgc ccctgcccgg cctgcgggca gcgctccccc ccatcggcca
      601 agttctgctt cgaatgtggg acctcgctcg gcgacggcgt cgtgccgcgc ccggcggacg
      661 ggggggcgcg cgaagccgcg gccgttccgg cgactgcgga gcggcggcag gtcacggtca
      721 tgttctgcga cgtcgtcggc tcgacgacgc tggcaacgcg gctcgacccc gaggacctcc
      781 gtgagatcgt caacgcctat cacctctgcg tcgccaagac ggttgcgcgc taccacggct
      841 atatcgcgcg gaccatgggc gacggcgtga tggcttattt cggctatccc caggcccgcg
      901 aggatgacgt cgagcgggcg gtgcgcgcca gccttgccct ggtcgaggcg gtggccggcc
      961 tcgacgcgcc cgagcggctg caagtccgca ttggcctaga taccggccgg gtcgtggtcg
     1021 gcgacctgat cagggccggc gaagcatcgg aacgcggcat cctcggcgag actcccaatc
     1081 gcgcggcgcg gctccaggcc atcgccgagc cgaacagcgt cgtcgtcggc ccgggcgcgc
     1141 gcccgcttct cggcgatctc ttcgaatacc gcgatctcgg cagcctggag ctgaaaggct
     1201 tttccgaacc gatcagcgcg ttccgcgtgc tcgggccgag cacgatcgag agccgcttcg
     1261 aggcgcttca cgcggcgacg ctggcgccgc tgatcggccg cgacgaggag atcgagctgc
     1321 ttgagcgccg ttggcagcgc gccaagactg gcgccggcca ggtcgtcctc gtctcgggag
     1381 agccgggcat cggcaaatcg catctgatct cggccatgct cgagcagatc gcgagcgagc
     1441 cgcacagccg tttgcgctat ttctgctcgc cccatcacac gcacagcgcg ctttatccca
     1501 tgatccgcga gctcgagcgg gcggccggct ttgcgcgcga cgacacggcc aactcgaagc
     1561 tcgccaagct cgccgcgctt ctttcgcata cctgcgcgcc ggacgatgac gtcgagctgc
     1621 tcgccgagct gctgtcggtg cgtggcgagg gccagcggcc ggagcccggc ggcactccgg
     1681 agcagcgcaa gcaaaggacc ctgcaggcgc tcatccggcg catcgaggca ctgtcgcagg
     1741 aacgtccggt gctgatgctc ctggaagacg cgcagtggat cgaccccacc agtctcgagg
     1801 tgatggaccg tttcgtgcag cgggcgcgcc agctgccggt tcttgtcgtg atgacgttcc
     1861 ggccggaatt cacgccgtca tgggccgggc agccgcacgt cacgctgcgc acgctgagcc
     1921 gtctcgatca gaccgagggc gccgccctga tcgatcgcat cgccggggag cggcgtttgc
     1981 ccccagacgt tgtcggcgag atcctagagc gcaccgacgg cgtgccgctg ttcatcgagg
     2041 agctgaccaa ggcggtcgtc gacgcgcgcg cggccgtcag ccgtccgccg cccggaaccg
     2101 gagcggggct cgtcatccct gccacgctcg acgcgctctt gatggcgcgg ttcgatcggc
     2161 tcgacgcgac cgccaaggag gcggcgcaga tcggcgccgc catcggccgc gaattctcct
     2221 acgagctgct ggcggccgtc gggcggacga gcgaccggga tctgtcgggc gcgctccgcc
     2281 agctcgtcgg gacgggcctc ttgtccgcct ggggcgagcc gcccgaagcg acctatctgt
     2341 tcaagcatgc cctggtccag gacgcctcgt atcgcaccat gctgcgcagc cgccgtcggg
     2401 agctgcacgc gcgcatcgtt gcggttctcg aagcgcgcca ccctgccgtc gtcgagcagc
     2461 agcccgatct cctggcccat cattgcaggc aggccgatct gccggagaag gcgatcgcct
     2521 actgggaacg ggccgggcag aaatcgcttg cccgctccgc gagcacggaa gcggcggccc
     2581 agctgcgcaa ggcgctgcag ctcctctcca cgttgccgga caaccgcgaa cgtcgccagc
     2641 aggaactggg gctgcagagc acgttggccg ccgccctcgt cgcgtcacgc ggcaacgcgg
     2701 cgtcggagac gggagaatcg tacacccgag ccagggagct atgcgaagaa ctcggcgaga
     2761 cgagcgcgct gacgcccgtc ctcagcggcc ttagcacgta tcatcagacg cg
//
LOCUS       DATAIQ010000384         1850 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_55417, whole genome shotgun sequence.
ACCESSION   DATAIQ010000384 DATAIQ010000000
VERSION     DATAIQ010000384.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1850)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1850)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1850
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_55417"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            313..1608
                     /locus_tag="VHN20_06475"
     CDS             313..1608
                     /locus_tag="VHN20_06475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009027159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CmpA/NrtA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HEX2725446.1"
                     /translation="MTYSHKGPTRRGLMSGAGSLGLAAAAKAAFPAGAFAQGAGPETK
                     AAKLGFIALTDAAPLFVAKEKGIFAKYGMPDVEVQKQASWGTTRDNLVLGSEGNGIDG
                     AHILTPMPYLISTGKVTQNNVPTPMYLLARLNLDSQCISVAKEYAGLKIGLDTRPFKE
                     ALEKKRASGKAVKAAMTFPGGTHDLWIRYWLAAGGIDPDKDIETIVVPPPQMVANMKV
                     GTMDCFCVCEPWNLQLIHQGIGYTAVNTGELWNRHPEKAFAMRAAWVDKHPRAAKALL
                     MAVQEAQQWCDKDENREELSNIVAKRQWISVPVADVLDRMKGKFDYGTGRVVENSPHV
                     MKYWRDHASYPFKSHDLWFITEDIRWGKFEPTIDARAVIDKVNREDLWREAAKELGVT
                     ATDIPASTSRGKETFFDGKVFDPDNPTAYLAALDIKRVA"
     gene            1667..>1850
                     /locus_tag="VHN20_06480"
     CDS             1667..>1850
                     /locus_tag="VHN20_06480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate ABC transporter, permease protein"
                     /protein_id="HEX2725447.1"
                     /translation="MPALKLENATALRRAGKVLTFRSKPVALRARLLPVFGDIAARVV
                     PPLVVLALMLLVWELLC"
BASE COUNT          351 a          602 c          591 g          306 t
ORIGIN      
        1 gagccggccg gacctcctca cgggttggct gaaccgcatg tggatcgggc ggccggcgat
       61 ggacgccgct gctcgccgga cgtcgccgcc ggcctctggc tgaataggtc caaaagctgt
      121 cggggctcgc cttcgccttg atcaaaaggc aggctcgtcg aggttgctgc cgttcttttg
      181 tgcactgccg caaatgggac aggcacattg acctgtgtgc atccgcgcat tcgcttggtt
      241 tgcgaaggcg acaacgttgg catgggattt ggaacgggcc tcagcgtcga cattccgtcg
      301 cctgaggcca caatgacgta ttcgcacaaa ggacccacgc gccgcggcct gatgtcaggc
      361 gccggcagcc tcggcctcgc cgctgccgcg aaggccgcct ttcccgctgg tgccttcgcg
      421 caaggcgccg ggccggaaac caaggccgcc aagctgggat tcatcgcctt gaccgatgcg
      481 gccccgcttt tcgtcgccaa ggagaagggc atcttcgcca agtatggaat gcccgatgtt
      541 gaggtgcaga agcaggcctc gtggggcacg acgcgcgaca acctcgtgct cggctcggag
      601 ggcaacggca tcgacggcgc gcacatcctg acgccaatgc cttacctgat ctcgaccggc
      661 aaagtgacgc agaacaacgt gccgacgccg atgtacctcc tggcccggct caatctcgac
      721 agccagtgca tctcggtcgc caaggaatat gccggactca agatcgggct cgacaccagg
      781 cccttcaaag aggcgctcga gaagaaaagg gcgtccggaa aggccgtgaa ggcggcgatg
      841 acgtttccgg gcggcacgca cgacctttgg atccgctatt ggctcgccgc cggcggcatc
      901 gatcccgaca aggacatcga gacgatcgtg gtgccgccgc cgcaaatggt cgccaacatg
      961 aaggtcggca ccatggactg cttctgcgtg tgcgagccgt ggaatctgca gctcatccac
     1021 cagggcatcg gatatacggc cgtcaacacc ggcgagcttt ggaacaggca tccggaaaag
     1081 gctttcgcca tgcgcgccgc ctgggtcgac aagcatccgc gcgcggccaa ggcgctgctc
     1141 atggcggtgc aggaagccca gcaatggtgc gacaaggacg agaaccgcga ggagctgtcc
     1201 aacatcgtcg ccaagcgcca gtggatcagc gtccccgtgg ccgacgtgct ggaccgcatg
     1261 aagggcaagt tcgattacgg caccgggcgc gtcgtcgaga acagccccca cgtcatgaaa
     1321 tactggcggg accacgcctc ctatccgttc aagagccacg acctctggtt catcaccgag
     1381 gacatccgct ggggcaagtt cgagccgacc atcgacgccc gggcggtgat cgacaaggtg
     1441 aaccgcgagg acctctggcg cgaggccgcg aaggagctcg gcgtaaccgc aaccgacatt
     1501 ccggcatcga cctcgcgcgg caaggagaca ttcttcgacg gcaaggtgtt cgacccggac
     1561 aatccgacgg cctacctcgc cgcgctcgat atcaagcgtg ttgcgtgagt gaacgctccg
     1621 ctgccggcgg ttcgccgcca gacaacgagg tctccctgac atggccatgc cagctttgaa
     1681 gctagagaac gcaactgcgc tgcggcgggc tggaaaggtt ctgaccttcc ggtcaaagcc
     1741 cgtcgccctg cgcgcacgac tgctgccggt cttcggcgac atcgccgccc gcgtggtgcc
     1801 gccgctcgtc gtgctcgcgc tcatgctgct cgtctgggaa ctgctgtgcg
//
LOCUS       DATAIQ010000385         1774 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_435840, whole genome shotgun sequence.
ACCESSION   DATAIQ010000385 DATAIQ010000000
VERSION     DATAIQ010000385.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1774)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1774)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1774
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_435840"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(63..947)
                     /locus_tag="VHN20_06485"
     CDS             complement(63..947)
                     /locus_tag="VHN20_06485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HEX2725448.1"
                     /translation="MFRIAHLTDPHVGPLPRPRVRELLSKRLAGYYNWRRNRRELHDM
                     DVLAALVADIRALSPDHIACTGDLCNIGLESEWKTSRVFMEGLGPPETVTLVPGNHDA
                     YVPGSLEGLLKACAEWTTGDDGTSGTFPFVRRARAVAFVGLSSAVPTAPFVASGRIGR
                     TQMEAAEKRLVELRDEGCFRVVLVHHPPHVGGAKPGRHLTDASAFEAMIRRAGAELIL
                     HGHNHVGSLAWLESPGGHVPVIGAPSASIRSGALAEGGYHLYAIDRDKAGFFLTAERR
                     GFDHEGKFGTLGMLALKR"
     gene            complement(1102..>1774)
                     /locus_tag="VHN20_06490"
     CDS             complement(1102..>1774)
                     /locus_tag="VHN20_06490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011159837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ferritin family protein"
                     /protein_id="HEX2725449.1"
                     /translation="GEAELMERQAANFYEKAATQSTDVSVRELFTHLAEVERGHERRA
                     GEIAEAHLTRDSKAIEESARRRAFVLQYVQPGLAGLIDGSVSTLAPLFAAAFATHHNW
                     ETFLVGLAASVGAGISMGFTEALSDDGVITGRGSPVLRGIVCGVMTTVGGIGHTLPYL
                     VPDSWPNAFYLATTIATVVVAVELLAIAWIRTRYMDTPFLRAMFQVVVGGVLVLLAGI
                     LIGSA"
BASE COUNT          291 a          595 c          618 g          270 t
ORIGIN      
        1 aggctagccg tggcgcatta aggctctgtt agcgcttcgc gcagaggtgg tcgcctggtc
       61 gatcagcgct tcagcgcgag catgccgagc gttccgaact tgccttcgtg atcgaagccg
      121 cggcgttcgg cggtcaggaa gaagccggcc ttgtcccggt cgatcgcgta gaggtggtac
      181 ccgccttccg ccagggcgcc gctgcggatc gacgccgacg gcgcgccgat gacgggcacg
      241 tgcccgccgg gcgattcgag ccaggcgagc gatccgacgt gattgtgtcc atgcaggatc
      301 agctcggcgc cggcgcgccg gatcatggcc tcgaaagccg atgcatcggt cagatggcgc
      361 ccgggcttgg cgccgccgac atgcggcggg tgatgcacca gcacgacccg gaagcagccc
      421 tcgtcacgta gctccaccag ccgcttctcg gcggcctcca tctgggtccg gccgatgcgg
      481 ccgctggcca cgaagggcgc ggtcggaacg gccgacgaga gtcccacgaa cgcaaccgcg
      541 cgggcgcggc gcacgaacgg gaacgtgccg ctggtgccgt catcgcccgt ggtccactcg
      601 gcgcaggcct tgagcaggcc ttcgagcgag ccgggcacgt aggcgtcgtg attgccgggc
      661 accagggtga cggtctcggg cgggccgagg ccttccatga agacgcgcga cgtcttccac
      721 tcgctctcga ggccgatgtt gcagaggtca cccgtgcagg cgatgtggtc gggcgacagc
      781 gcgcggatat cggcgaccag cgccgccagc acatccatgt cgtggagttc gcggcggttg
      841 cgccgccagt tgtaatagcc ggcgaggcgc ttgctcagaa gctcgcgcac ccgcggccgc
      901 ggcagcggcc cgacatgcgg atcggtgagg tgggcgatgc ggaacatgcc gagccaacgt
      961 ttgtacaagc gccgggttcg tcaagggcag tcggcagtgg gcagtcggca atcggcaatc
     1021 ggcaatcggc aatcggcaat ggccaatcgc ccatcgagtc ctactgccta ctgccgactg
     1081 cctactgccc aattcgcctc gtcacgcgct gccgatcaag atgccagcca acagcaccag
     1141 gacgccgccc acgaccacct ggaacatggc ccgcaggaac ggtgtgtcca tgtagcgggt
     1201 gcggatccac gcgatggcga ggagctcgac ggcaacgacc accgtggcga tcgtcgtcgc
     1261 gagatagaag gcgttcggcc agctgtccgg cacgagatag gggagggtgt ggccgatgcc
     1321 gccgaccgtc gtcatgacgc cgcatacgat gccgcgcaga accggcgagc cgcgcccggt
     1381 gatcacgccg tcgtcggaca gcgcctccgt gaagcccatg ctgatgccgg cgccaaccga
     1441 cgcggcgaga ccgaccagga acgtttccca gttgtgatgc gtcgcgaagg cggcggcaaa
     1501 gagcggcgcc agcgtcgaga ctgagccgtc gatcagtccg gcgagccccg gctgcacgta
     1561 ttgcagcacg aaggcccgtc gccgggcgct ttcctcgatg gccttgctgt ccctggtgag
     1621 gtgagcctcc gcgatctccc ccgcgcggcg ctcgtgcccg cgctcgacct cggccagatg
     1681 cgtgaacagc tcgcgcaccg acacgtcggt cgattgggtg gctgccttct cgtaaaaatt
     1741 ggcggcttgg cgctccatga gctccgcctc gccg
//
LOCUS       DATAIQ010000386         2034 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_298008, whole genome shotgun sequence.
ACCESSION   DATAIQ010000386 DATAIQ010000000
VERSION     DATAIQ010000386.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2034)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2034)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2034
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_298008"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1471)
                     /gene="pnp"
                     /locus_tag="VHN20_06495"
     CDS             complement(<1..1471)
                     /gene="pnp"
                     /locus_tag="VHN20_06495"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012334632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004654 - polyribonucleotide
                     nucleotidyltransferase activity [Evidence IEA];
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HEX2725450.1"
                     /translation="MFDIQREELMWAGRKLVLETGKVARQADGAVLATYGETTVLAAV
                     VSAKEPKAGIDFFPLTVNYQERTYAAGRIPGGYFKREGRPTEKETLVSRLIDRPIRPL
                     FADGYKNETQVTVTVLSHDLENDPDIVAMVAASAALTLSGVPFMGPIGAARVGYFNGG
                     YKLNPPLQEMESTQLDLVVAGTGEAVLMVESEAKELPEDVMLGAVMFGHKHFQPVIEA
                     IIRLAEKAAKEPRDFAPADLSAVEKQVLQIAETDLRDAYKKTVKQERYAAVDAIKQRV
                     VEQLCPKEGEQKCDPEQVKAVFKEAQAKVVRWNILDDGKRIDGRDLKTVRPIVAEVGV
                     LPRAHGSALFTRGETQALAVATLGTGEDEQFIDELEGTRKESFLLHYNFPPYSVGETG
                     RMGSPGRREIGHGKLAWRAIHPMLPPAHDFPYTIRVVSEITESNGSSSMATVCGSSLA
                     LMDAGVPLKAPCAGIAMGLIKEGDRYAVLSDILGDEDHLG"
     gene            complement(1680..1949)
                     /gene="rpsO"
                     /locus_tag="VHN20_06500"
     CDS             complement(1680..1949)
                     /gene="rpsO"
                     /locus_tag="VHN20_06500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015929522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HEX2725451.1"
                     /translation="MSVTAERKNALIKEYAHKSGDTGSPEVQVAILTERINNLTDHFK
                     MHVKDNHSRRGLLKLVSQRRSLLDYLRGKDESRYRTLIEKLGIRR"
BASE COUNT          309 a          649 c          700 g          376 t
ORIGIN      
        1 cgccgagatg atcctcgtca ccgagaatgt cggacagcac ggcgtagcgg tcgccttcct
       61 tgatgaggcc catggcgatg ccggcgcagg gcgccttcag cggcacgccc gcatccatca
      121 gggccagcga ggagccgcac acggtcgcca tcgacgacga gccgttcgac tcggtgatct
      181 cggacacgac gcggatcgtg tacgggaagt catgcgccgg cggcagcatc gggtggatgg
      241 cgcgccaggc gagcttgccg tggccgatct cgcggcggcc gggcgagccc atgcggccgg
      301 tctcgcccac cgaatagggc gggaagttgt agtgcagcag gaaggattcc ttgcgggtgc
      361 cctcgagctc gtcgatgaac tgctcgtcct cgccggtgcc gagggtagcg accgcgaggg
      421 cctgcgtctc accacgggtg aaaagcgccg agccatgcgc gcgcggcagg acgccgacct
      481 cggccacgat cgggcggacc gtcttcaggt cgcggccgtc gatgcgcttg ccgtcatcga
      541 ggatgttcca gcgcacgacc ttggcctgcg cctccttgaa cacggccttg acctgctcgg
      601 ggtcgcactt ctgctcgcct tccttcgggc acagctgctc gaccacccgc tgcttgatcg
      661 cgtcgaccgc ggcataacgc tcctgcttga cggtcttctt gtaggcgtcg cgcagatcgg
      721 tctcggcgat ctggagaacc tgcttctcga ccgcggagag gtcggccggc gcaaagtcgc
      781 gcggctcttt ggcggccttt tcggcgaggc ggatgatcgc ctcgatcacc ggctggaaat
      841 gcttgtggcc gaacatcacg gccccgagca tgacgtcctc gggcagctcc ttggcttccg
      901 actcgaccat gagcacggcc tcgccggtgc cggccaccac gaggtcgagt tgcgtcgact
      961 ccatctcctg gagcggcggg ttcagcttgt agccgccgtt gaagtagccg acacgcgcgg
     1021 cgccgatcgg gcccatgaac ggcacgccag acagcgtcag cgccgccgaa gccgccacca
     1081 tcgccacgat gtccgggtcg ttctcaaggt cgtgcgagag cacggtcacg gtgacctgcg
     1141 tctcgttctt gtagccgtcc gcgaaaagcg ggcggatcgg ccggtcgatc agacgcgaga
     1201 cgagcgtctc tttttcggtc gggcgtccct cgcgcttgaa gtagccgccg gggatgcgcc
     1261 cggccgcgta ggtgcgctcc tggtaattga ccgtgagcgg aaagaagtcg atgccggcct
     1321 tcggctcctt ggccgagacc acggcggcga ggacggtcgt ctcgccgtag gtcgccagga
     1381 cggcgccgtc ggcctggcgg gcgaccttgc cggtttcgag aacgagcttg cgcccggccc
     1441 acatcagctc ttcacgttgg atgtcgaaca tttcggttgt ctttcatgca tgcgggcggc
     1501 ggcgcgatgc catgtgcaag acggcaagag gctcgacctc tccagcgaac gggagaggtt
     1561 ggagagcccc ttgcgatcct gccatggtca tcgtgtcgtc cgccggttga gcggccggtc
     1621 ggcttgaccg gccgtcacag gccaccgggg gccccatgcc cccgggggcg gaacgaggct
     1681 cagcgacgga tgccgagctt ctcgatcagg gtgcggtagc gcgactcgtc cttgcccctg
     1741 agatagtcga ggagagatcg gcgctgcgag acgagtttca agagaccgcg gcgggaatgg
     1801 ttgtccttga cgtgcatctt gaagtgatcg gtgagattgt tgatgcgctc cgtcaggatc
     1861 gcgacctgca cctcggggga gccggtatcg ccggatttat gcgcatattc cttgatgagc
     1921 gcgttcttgc gctcggccgt gaccgacatc ggaagtcctt tcttttctgt tctgtcgagg
     1981 aatgagccgc gcttgtgcgc ttgcgcctcg agagggccgg gccgggatgt cgtc
//
LOCUS       DATAIQ010000387         2712 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_20826, whole genome shotgun sequence.
ACCESSION   DATAIQ010000387 DATAIQ010000000
VERSION     DATAIQ010000387.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2712)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2712)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2712
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20826"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            41..934
                     /locus_tag="VHN20_06505"
     CDS             41..934
                     /locus_tag="VHN20_06505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020186599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HEX2725452.1"
                     /translation="MAHLLDIDQLRTFVAIADTGSFTKAADIVHKTQSAVSMQMKRLE
                     ERVGRNIFERDGRLSKLTEDGDRLLDYARRIVRLNSECMASFNEADLTGRVRLGVPDD
                     YADRYLPEILARFSRSHPRAEVTVVCEPTPNLLDRLQSNDLDLAIITHLDSRGPSEII
                     RVEQLLWVTSSRHCIHETDPVPLALGRPNCDWRQSSTAALEGAGRLFRILYVSWNSTA
                     VGAAVLAGLAVSVLPESAVRSGMRILGPRDGYPALPSCKIGLVRNRHEPTPLADALAQ
                     EIRQSLDNLGAGRYTPAVAAE"
     gene            complement(1045..1356)
                     /locus_tag="VHN20_06510"
     CDS             complement(1045..1356)
                     /locus_tag="VHN20_06510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725453.1"
                     /translation="MSMPNASTSNKTPVGREEADGPALARPLQEHLGQQLRTTYTALT
                     DKPAFLGDAAVPPQFEEHLQRLEAKDRERHHEKVRQRGIAAVESALQNLDGEPHQPGE
                     R"
     gene            complement(1494..1787)
                     /locus_tag="VHN20_06515"
     CDS             complement(1494..1787)
                     /locus_tag="VHN20_06515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725454.1"
                     /translation="MRFFFNLTCGAHVFHDRDGEDLPDLDAAREFACESARELMSTRL
                     RTRDDWSALAYEIGDGGGQRLLVVRFPDVPEKRASRRRGVARRAPVRQRAMTA"
     gene            2006..2143
                     /locus_tag="VHN20_06520"
     CDS             2006..2143
                     /locus_tag="VHN20_06520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725455.1"
                     /translation="MKRLAGIASTIALMLLVAACDKCGNFNINVPGGSYKTCTDVKPQ
                     G"
     gene            complement(2239..2529)
                     /locus_tag="VHN20_06525"
     CDS             complement(2239..2529)
                     /locus_tag="VHN20_06525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013166575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HdeA/HdeB family chaperone"
                     /protein_id="HEX2725456.1"
                     /translation="MRVVYVTLLAATLLTGSPATAQVLDLSTIKCKDFVSSSKETIGV
                     ILAWMHAYYKDEDDPPTIDFDKLAKEGEQLGAYCAANPEIGLITAADKLFDK"
BASE COUNT          458 a          907 c          879 g          468 t
ORIGIN      
        1 tgtataagat caacgtcact gatccataga ggcaaacgcc atggcccacc tgctcgacat
       61 cgaccagctc aggacctttg tggccatcgc cgataccggc tcgttcacaa aagcggcgga
      121 catcgtccac aagacgcaat cggccgtgtc gatgcagatg aagcggctcg aggaacgcgt
      181 cgggcgcaac attttcgagc gcgacgggcg cctgtcgaag cttaccgagg acggcgatcg
      241 gctgctcgac tatgcgcgcc gcatcgtgcg cctcaacagc gagtgcatgg cgtcgttcaa
      301 cgaggccgac ctgaccggtc gggtgcggtt gggcgtgccg gacgattacg ccgaccgtta
      361 cctgcccgag atcctggccc gcttctcgcg ttcgcatccg cgcgccgagg tgacggtcgt
      421 gtgcgagccg acgccgaacc tgctcgaccg gctgcagagc aacgacctcg acctcgccat
      481 catcacgcat ctggacagcc gcgggccgtc cgagatcatc cgcgtcgagc agctcctgtg
      541 ggtgacatcg tcacggcact gcatccatga gaccgatccg gtgccgctgg ccctcggacg
      601 cccgaactgc gactggcggc aatcgagcac cgcagcgctg gaaggtgccg gccgcctgtt
      661 ccgcattctt tacgtgagct ggaactcgac cgccgtcggc gcagccgtgc tcgccgggct
      721 cgccgtgtcc gtgctgccgg agagcgccgt gcgctctggc atgcgcatcc tcgggccgcg
      781 cgacggctac cctgccctgc cctcatgcaa gatcgggctc gtgcgcaacc gccacgagcc
      841 gacgccgctc gccgacgcgc tggctcagga gatccggcag agcctcgata atctgggggc
      901 gggacgctac acgccggcgg tcgcggccga atgaatgtct tcggcgcccc tcggctgatc
      961 tcagatcgac gtaatctcgt cctggttctt cttggatcgc gtcatcttgt tcggcgaagt
     1021 ggaatccact tctgcgaatg atgctcagcg ctcgccgggc tggtgcggct cgccgtcgag
     1081 gttttgcaac gcgctttcga ccgccgcgat accgcgctgg cgcacttttt cgtgatgccg
     1141 ctcgcggtcc ttggcttcga ggcgctgcag gtgctcctcg aattgcggcg ggacggccgc
     1201 gtcgcctagg aacgccggct tgtcggtcag cgccgtatag gtcgtgcgca gctgctggcc
     1261 gagatgctcc tgcaacgggc gagcgagcgc cggcccgtcc gcctcttcgc ggccgaccgg
     1321 tgttttgttg ctggttgacg cgtttggcat gctcacgcgt gcctcctcgg ttcggacata
     1381 acgcccatgg agcccgggaa gttgcgcccg gccgggcccg attcgagacg agcgagaatg
     1441 cggcaggggc gcgaaagggg tcaagtcgcg cccgaaaacg gttgtggaac gcatcaggcg
     1501 gtcatcgcgc gttggcggac cggagcacgg cgcgccacgc cgcggcgccg ggacgcccgc
     1561 ttttccggca cgtcggggaa gcgcaccacg agaaggcgct gcccgccccc atcgccgatt
     1621 tcgtaggcca aggcgctcca gtcgtcgcgg gtacgcaggc gcgtgctcat cagctcacgg
     1681 gcgctctcgc aggcgaattc ccgcgccgca tcgaggtcgg gcaggtcctc cccgtcgcgg
     1741 tcgtgaaaca catgggcgcc gcaggtgaga ttaaagaaaa atcgcatgac gcgattatga
     1801 aactttaagc ctttgcgatg ggttaagccg ggctcccggg acccggccag aatgagacag
     1861 gcgtccggcg gcgcctgagg cgacgggccg cggttcggtc gaacagcccc ctgccggcat
     1921 aatcggccga ggtgtgtccc tagcgtcctc gaaaacctgg ccccggctcg tatatggtgg
     1981 ccgccaaacc aggagacgcc ccaggatgaa gcgccttgcc ggcatcgcca gcaccattgc
     2041 cctgatgctg ctcgtagccg catgcgacaa gtgcggcaat ttcaacatca acgtcccggg
     2101 cggttcctac aagacctgca ccgacgtcaa gccgcagggc tgaggtccgg tcgcgcccct
     2161 gcccggagcg cgatcgatgc tcgatcgacc acgctccctt cctcatcgcc gcatgatgct
     2221 gcagccgccc gacgggcgct atttgtcgaa cagcttgtcg gcggcggtga tcaggccgat
     2281 ctcgggattg gccgcgcaat aggcgccgag ttgctcgcct tccttggcca gcttgtcgaa
     2341 gtcgatcgtg ggcggatcgt cctcgtcttt gtaataggca tgcatccacg cgaggatcac
     2401 gccgatcgtc tccttgctgc tggaaacgaa gtccttgcac ttgatcgtcg agagatcgag
     2461 cacctgagcc gtcgccggcg aaccggtcag gagtgttgca gcaagcagcg tgacgtagac
     2521 aacccgcata gcccggtctc ccaagaggaa cggaaaacgc cgcaacggcc acgctacgcg
     2581 cgcgccacgc ggccggcaag gaccgtcccc aggccggcgg aagcgtcggc ccgtgtgaac
     2641 tccggtccaa agcccccctt cccccacgaa agaggtagtg ggcgactttg aatttgggag
     2701 ggcttgacgc ac
//
LOCUS       DATAIQ010000388         2632 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_389820, whole genome shotgun sequence.
ACCESSION   DATAIQ010000388 DATAIQ010000000
VERSION     DATAIQ010000388.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2632)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2632)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2632
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_389820"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            83..2596
                     /locus_tag="VHN20_06530"
     CDS             83..2596
                     /locus_tag="VHN20_06530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012330480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS-domain containing protein"
                     /protein_id="HEX2725457.1"
                     /translation="MPAARCHDARKVGAGGCRRAMALMSGALSLSLVPETSVASALER
                     AHADLAGALAQLNPYNAIGLAAFTGLVIFATTTAMLYLRAWRRWTERERGLAQRLAEL
                     RAAQDRADLLTAAERQLVIAWSGRDSAPRFEGDTSIIPAHAVDRRLDLASWLVPADAA
                     TLDAALARLKERGEAFHLTLRTSGQRFVEAEGRTLSGQALLRLRDVTGERLELLRCRE
                     DLGAARGELRNLHGLLNSIDQPVWLRDREGRLAWTNQAYLTALDAKDIDTVRSRSLEL
                     LDAPTRAEAERLRRQNLPFHTRISAIVFGSRHVLDICESPAPEGSAGIAVDVSELDAV
                     RSDLQQQMQAHTRTLDQLPTAVAIFDAKQHLVFHNAAYRQLWGVEQAFLETRPSDSEI
                     LDRLRASRKLPEQADYRGWKTNVLAAYRATGAQESWWHLPDGRTLRVVTSPNPQGGLT
                     YLFDDVSERVHLEARYNGMLRVQGETLDTLTEGVAVFGTDGRLKLSNRAFGKIWKLAP
                     DAIADQPHIDEMIKLCAPLFADEAAWGDLRGAIAGLPEMRMGVTCRMERRDGSVFDCA
                     AQPLPDGATLLTFIDMTAGVNVERALTEKNEALERAARLREEFVHHVSYELRSPLTNI
                     IGFTQLLGDETIGALNPRQREYASHIMRSSSALLAMINDILDLASIDTGAMELVRETV
                     DIRDTIEAAARGVEDRLAESAVTLHIETPANIGNFVADGKRVRQILFNLLSNAVGFSS
                     PGQAIRVTASKSAGEVVLQVTDQGRGIPAEVKAKVFERFESHTLGTRHRGVGLGLSIV
                     RSFVELHGGRVELASAPDAGTSVTCIFPAGGAPERLAAA"
BASE COUNT          405 a          930 c          886 g          411 t
ORIGIN      
        1 ctgaatgcgt ggttgggtga tcaaggcagc aaaccccggc ccgcttcgag ggccattctt
       61 ttcgtggcat gacggcgccg gcgtgccggc cgctcggtgt catgacgcgc gcaaggtcgg
      121 cgccggcggg tgccggcgcg ccatggccct catgtcgggc gcgctctccc tgagcttggt
      181 tcccgagacc tccgtcgcat cggcgctgga gcgcgcccat gccgatctcg cgggcgcgct
      241 cgcacagctg aacccgtaca acgccatcgg cctcgctgcc ttcaccggcc tcgtcatttt
      301 cgcgacgacc acggcgatgc tctatctgcg cgcgtggcgc aggtggacgg aacgcgagcg
      361 cggcctggcg caacggctcg ccgagctgcg cgccgcgcag gacagggccg acctgctcac
      421 ggcggcggag cgccagctcg tcatcgcctg gagcggccgt gacagcgcgc cgcgcttcga
      481 gggcgatacc tcgatcatcc cggcgcatgc cgtcgaccgg cgtctcgacc ttgcatcatg
      541 gctcgtgccg gccgatgcgg ccaccctcga cgccgcgctg gcgcgcctga aggagcgcgg
      601 cgaggcgttt catctgaccc tacgcacgag cggccagcgt ttcgtcgagg ccgaggggcg
      661 cacgctgagc gggcaggccc tgctgcgtct gcgcgacgtc accggcgagc ggctcgagct
      721 gctgcgctgc cgcgaggatc tcggcgccgc gcgcggcgag ctcaggaatt tgcacgggct
      781 tctcaattcg atcgaccagc ccgtctggct gcgcgaccgc gagggccgcc ttgcctggac
      841 caaccaggcc tatctcacgg cgctcgacgc caaggacatc gacacggtca ggagccgctc
      901 gctcgagctg ctggacgcgc cgacgcgcgc ggaagcggag cgcttgcggc gccagaacct
      961 gcctttccat acccgtatca gcgccatcgt gttcggctcg cgccatgtcc tcgacatttg
     1021 cgaaagcccg gctcccgaag gcagcgccgg catcgccgtc gatgtctcgg agctggacgc
     1081 ggtgcggtcg gatctgcagc agcagatgca ggcgcatacg cgcacgctcg atcagctgcc
     1141 gaccgccgtg gcgatcttcg acgccaagca gcatctcgtg ttccacaatg cggcctatcg
     1201 ccagctctgg ggcgtcgagc aggctttcct cgagacgcgt cccagcgaca gcgagatcct
     1261 cgatcgtctg cgtgcctcgc gcaagctgcc ggaacaggcc gactatcgcg gctggaagac
     1321 gaatgtcctt gcggcctacc gcgcgaccgg agcgcaggaa tcgtggtggc acctgccgga
     1381 cgggcgcacg ctgcgcgtcg tgacgagccc gaacccgcaa ggcggcctca cctacctatt
     1441 cgatgacgtg agcgagcgcg ttcacctgga agcccgctac aacggcatgc tccgcgttca
     1501 gggcgagacc ctcgacacgc tgacggaggg cgtcgccgtg tttggaaccg atggccgcct
     1561 caagctgtcg aatcgcgcct tcggcaagat ctggaagctc gcgcctgacg cgatcgcgga
     1621 ccagccgcat atcgacgaga tgatcaagct gtgcgcgccg ctattcgccg acgaggcggc
     1681 atggggcgac ctgcgcggcg ccattgccgg ccttcccgag atgcgcatgg gcgtcacctg
     1741 ccgcatggag cggcgcgacg gctcggtatt cgattgcgcc gcccagccgc tgccggacgg
     1801 agcgaccctg ctcaccttca tcgacatgac ggccggcgtg aatgtggagc gggcgctcac
     1861 cgagaagaac gaggcgctcg agcgcgccgc gcggctgcgc gaggagttcg tgcaccatgt
     1921 cagctacgag ctgcgctcgc ccttgaccaa catcatcggt ttcacgcagc ttctcgggga
     1981 tgagacgatc ggcgccctca acccgcggca gcgcgaatat gccagccaca tcatgcgctc
     2041 ctcgagcgcc ctgttggcca tgatcaacga cattctcgat cttgcctcga tcgatacggg
     2101 cgccatggag ctggtgcgcg aaaccgtcga catccgcgac accatcgagg ccgccgcccg
     2161 gggcgtcgag gaccggctcg ccgagtccgc cgtgacgctg cacatcgaga ccccggccaa
     2221 catcggcaac ttcgtcgcgg acggcaagcg cgtgcggcag atcctgttca acctgttgtc
     2281 caacgccgtg ggcttctcct cgcccgggca ggcgatccgg gtcaccgcca gcaagtccgc
     2341 aggcgaggtc gttctccagg tgaccgatca gggccgcggc atcccggccg aggtcaaggc
     2401 gaaggttttc gaacgcttcg agagccatac gctcggcacg cggcaccggg gcgtcggcct
     2461 cgggctgtcg atcgtgcgct cgttcgtcga gctgcatggc gggcgtgtcg agctcgcgtc
     2521 cgcaccggac gccggcacga gcgtgacctg catcttcccg gccggcggcg cgcctgagcg
     2581 gttggcggcc gcctgaacgc catggctgac gcaggcacct acgcgaggcc cg
//
LOCUS       DATAIQ010000389         3142 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_298074, whole genome shotgun sequence.
ACCESSION   DATAIQ010000389 DATAIQ010000000
VERSION     DATAIQ010000389.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3142)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3142)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3142
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_298074"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            16..>3142
                     /locus_tag="VHN20_06535"
     CDS             16..>3142
                     /locus_tag="VHN20_06535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007566390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid adenylation domain-containing
                     protein"
                     /protein_id="HEX2725458.1"
                     /translation="MNIAERAGLLGDARPVAQAVLRGEVRDDLIRDEVLADLFAATAK
                     SRASHTALIFGTDRLTYADLDARTDAIARGLIRAGIGPGDVVGLWMCRGADLLVAQIA
                     ITKSGAAWLPFDADVPSERIAVCLDDAGAKGLLTSEALAAKLELRHPIFTPAALVDAA
                     DAQTVDARARGLTPDHPAYLIYTSGSTGTPKGIVITHRNICHFLRSANEVYGFRADDV
                     VFQGASVAFDLSMEEIWVPYMVGATLFVASPAMIGDVEKLPELLEDAGITVLDTVPTL
                     LAMLTRDVPSLRLILLGGEALPAPLVTRWAGNGRRLFNTYGPTEATVVATVAEMSAGE
                     PVTIGQPIPNYTCYVVDESLALLPAGIQGELLIGGPGVAQGYLKRPDLTAEKFIRNPF
                     SNDGRDPILYRSGDAVSVDQDGNIVFHGRIDDQVKIRGFRVELGEIEAKLAHLAGVGQ
                     AAVVLRRDEGIDRLVAFLVLERGAALDRATLRADLREQLPPYMIPSHFEIVEELPRLT
                     SGKIDRKMLRAVPLAVGDAPGEQEEPRNETEAALLVAAKRAFGNQTLPFDADFFTDLG
                     GHPLLAARFVSAVRETPALASITLQDVYEKRTLRSLADHLIVRTGGAGAAVVMRDLSF
                     EPPPLLRRFLCGLAQAATLPILLTLTTAQWLGVFVTYLLLAGEGLGFWFEMGALLAIY
                     VAINIVSAVLAVAAKWLILGRTKPGRYPLWGVYYFRWWLARRFQALVHIKWLQGSPAI
                     RFYLRALGAKVGRDAIIADIDAGALDLVTIGAGTTIGTKVELMNAEIIGNELVIGRID
                     IGVDAYIGNSCAITYGSTIGDHAELADLTAIPEGTVVGEAERWDGSPGRKVGMVDVAA
                     LRAPPEASAARRHVVNLFYGLMLIVMPAVSLLPIFPAFYLFDRIDDRLSDYIEIHYHW
                     YLPVITWPTALFMTAATVLLIAVVRWLVLPRVTSGHYSIWSGFYLRKWTVALATEVTL
                     DTLTSLFATIYMRAWYRLMGARIGKGAEISTNLAGRYDLTTIGAKNFIADEVVFGDED
                     IRRGWMHLEPVR"
BASE COUNT          459 a         1143 c         1014 g          526 t
ORIGIN      
        1 cgggcggagt tcacaatgaa tattgcggag agagcgggct tgctcggaga cgcccgccct
       61 gtcgctcaag cggtgttgcg cggcgaagtt cgcgacgacc tgatccggga tgaagttctc
      121 gccgacctgt tcgccgcgac cgcgaaatcg cgcgcgagcc acaccgccct gattttcggc
      181 acggaccggc tcacctatgc cgacctcgat gcgcgcaccg acgcgatcgc gcgcggcctg
      241 atccgcgccg gcatcggccc cggcgacgtc gtcgggctgt ggatgtgccg cggcgccgac
      301 ctcctcgtgg cgcagatcgc catcaccaag tcgggcgcgg cctggctgcc attcgatgcc
      361 gacgtgccgt ccgagcgcat cgccgtctgt ctcgacgacg ccggcgccaa aggcctcctt
      421 accagcgagg cgctggcggc gaagctcgag ctccgccatc cgatcttcac gcccgccgcg
      481 ctcgtcgacg cggccgacgc acagacggtc gacgcgcgcg cgcgcggcct cacgcccgat
      541 cacccggcct acctgatcta cacgtcgggc tcgaccggca cgccgaaagg catcgtgatc
      601 actcaccgca acatctgcca cttcctgagg tcggccaacg aggtctacgg ctttcgcgcg
      661 gacgacgtcg tcttccaggg cgcgtcggtc gcgttcgacc tgtccatgga ggagatctgg
      721 gtcccttaca tggtcggcgc gacgctgttc gtcgccagcc cggccatgat cggcgacgtc
      781 gagaagcttc ccgagcttct cgaagatgcc ggcatcaccg tgctcgacac ggtgccgacg
      841 cttcttgcca tgctgacccg cgacgtgccg tcgctgcgcc tgatcctgct cggcggcgag
      901 gcgttgccgg ctcccctggt gacgcgctgg gccggcaacg ggcggcgcct gttcaacacc
      961 tatggcccga cggaggccac ggtcgtcgcc accgtcgccg agatgagcgc gggcgagccg
     1021 gtgacgatcg ggcagccgat cccgaactac acctgctacg tcgtcgacga gagcctcgcc
     1081 ctgcttcccg ccgggatcca gggggagttg ctgatcggcg gccccggcgt cgcccagggc
     1141 tacctcaagc ggcccgacct cacggccgaa aaattcatcc gcaatccgtt ctccaacgac
     1201 gggcgtgatc cgatcctcta ccgctccggc gacgcggtca gcgtcgacca ggacggcaac
     1261 atcgtctttc acggccgcat cgacgaccag gtcaagatcc gcggcttccg ggtcgagctc
     1321 ggcgagatcg aggcgaagct tgcgcatctc gccggcgtcg gccaggccgc ggtggtgctg
     1381 cgccgtgacg aaggcatcga ccggctcgtc gcgttcctgg tcctcgagcg cggtgccgcg
     1441 ctcgaccgcg ccaccttgcg ggccgacctg cgcgagcagc tgccgcccta catgatcccg
     1501 agccatttcg agatcgtcga ggagctgccg cggctcacct cgggcaagat cgatcgcaag
     1561 atgctgcgcg ccgtgcccct tgcggtcggc gacgcgccgg gcgagcagga agagccgcgc
     1621 aacgagaccg aggcggcgct gctcgtggcc gccaagcgcg ccttcggcaa ccagacgctg
     1681 ccgttcgacg cggacttctt caccgatctc ggcggccacc cgctgcttgc cgcgcgcttc
     1741 gtgtcggcgg tgcgcgagac gccggcgctc gcctcgatca cgctgcagga cgtctacgag
     1801 aagcgcaccc tacgcagcct cgccgatcat ctgatcgtgc gcaccggcgg cgccggcgcc
     1861 gccgtggtga tgcgcgatct ctcgttcgag ccgccgccgc tgctgcgccg attcctgtgc
     1921 ggcctcgccc aggcggcgac gctgccgatc cttctgaccc tcacgacggc gcagtggctc
     1981 ggcgtcttcg tcacctatct gctgctcgcc ggcgaaggcc tcggcttctg gttcgagatg
     2041 ggggcgctgc tcgccatcta cgtggccatc aacatcgtct cggccgtgct cgcggtcgcc
     2101 gccaaatggc tgatcctggg acgcaccaag ccggggcgct atccactctg gggcgtctat
     2161 tatttccgct ggtggctggc gcgtcgcttc caggctctcg tccacatcaa gtggctgcag
     2221 gggtcgcccg ccatccgctt ctacctgcgc gcgctcggcg ccaaggtcgg gcgcgacgcc
     2281 atcatcgccg acatcgatgc cggtgccctc gacctcgtga ccatcggcgc gggcaccacg
     2341 atcggcacca aggtcgagct gatgaatgcc gagatcatcg gcaacgagct ggtcatcggg
     2401 cgcatcgaca tcggcgtcga cgcctatatc ggcaattcct gcgccatcac ctacggctcg
     2461 acgatcggcg atcacgccga gctcgccgat ctcacggcca tcccggaggg aacggtcgtg
     2521 ggcgaggccg agaggtggga cggatcgccc ggccgcaagg tcggcatggt cgacgtggcc
     2581 gcgctgcggg cgccgcccga ggcgtcggcc gcgcgccgcc acgtggtcaa cctgttctat
     2641 gggctcatgc tgatcgtcat gccggcggtc agcctgctgc cgatcttccc ggccttctac
     2701 ctgttcgacc ggatcgacga ccgcctctcc gactatatcg agatccacta tcactggtac
     2761 ctgccggtca tcacctggcc gacggcgctg ttcatgacgg ccgccacggt cctcctgatc
     2821 gccgtcgtgc gctggctggt cctgccgcgc gtcacctccg gccactactc catctggagc
     2881 ggcttctacc tgcgcaaatg gaccgtcgcg ctggcgacgg aggtgacgct cgacacgctg
     2941 acgtcgctgt tcgcaacgat ctacatgcgc gcctggtacc ggctcatggg cgcgcgcatc
     3001 ggcaagggcg cggagatctc gaccaacctc gccggccgct acgatctcac caccatcggc
     3061 gccaagaatt tcatcgccga cgaggtggtg ttcggcgacg aggacatccg ccgcggctgg
     3121 atgcatctcg agccggtgcg ca
//
LOCUS       DATAIQ010000390         1710 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_20922, whole genome shotgun sequence.
ACCESSION   DATAIQ010000390 DATAIQ010000000
VERSION     DATAIQ010000390.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1710)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1710)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1710
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20922"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..787
                     /locus_tag="VHN20_06540"
     CDS             <1..787
                     /locus_tag="VHN20_06540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="MCE family protein"
                     /protein_id="HEX2725459.1"
                     /translation="LAKRLNDSAPKLDTALGDLGNIMKAIDPAKVGRTVDNAERFTAA
                     LNAVDPQRVGRIVENIDVFTQVLGDNKQNVSNILLETAGLTRRLNDTAPKLDMAITDV
                     GNVARALDASKLNRTIENADRFAAALGNAGPDVEKAIREAASITEKLNRSADRIDGVL
                     KAAENFLGSAAGEEGKDTFRSIRDAADSIRVLANNLDHRTAEITVGISRFTNSGSRQF
                     EAAATEARKTLNDVGRAVRSIEKNPNQLIFGGRPSLPEYSGRR"
     gene            876..1553
                     /locus_tag="VHN20_06545"
     CDS             876..1553
                     /locus_tag="VHN20_06545"
                     /inference="COORDINATES: protein motif:HMM:NF015823.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-type transport auxiliary lipoprotein family
                     protein"
                     /protein_id="HEX2725460.1"
                     /translation="MSGVAMAALAGACSSSPPTTYDLSAPRQAARGGGGSGAQIAVAE
                     PVAVQALEADRILVKDSSGAISTVGGAQWADRLPRLIQARLIQTFENASRIRAVSRPS
                     DRITPDYQLTSEIRAFQIDASTSQAVVEMSVKLVNDRNGRIATARVFSARSGVASINA
                     ENATKALDRALSSVLLQIVRWVGTGQAPSGEASVIEPPSSTAEPSSSAATAPDESGTP
                     SSQSAQL"
BASE COUNT          298 a          617 c          553 g          242 t
ORIGIN      
        1 cctcgccaag cgcctgaacg acagcgcgcc gaagctcgac acggccttgg gcgatctcgg
       61 caacatcatg aaggccatcg atccggccaa ggtcgggcgc acggtcgaca acgccgagcg
      121 cttcacggcc gccctcaacg ccgtcgatcc gcagcgggtt ggccgcatcg tcgagaatat
      181 cgacgtgttc acccaggtgc tgggcgacaa caagcagaac gtctccaata tcctgctcga
      241 gacggccggg ctgacccgcc gcctcaacga cacggccccc aagctggaca tggcgatcac
      301 cgacgtcggc aacgtcgcac gggcgctcga cgcctcgaag ctcaaccgca ccatcgagaa
      361 tgccgaccgt ttcgcagccg cgctcggcaa cgccggcccc gacgtcgaga aggccatccg
      421 ggaggccgcc tccatcaccg agaagctgaa ccgctcggcg gaccgcatcg acggggtgct
      481 caaggccgcc gagaatttcc tcggctcggc cgccggcgaa gagggcaagg acaccttcag
      541 gtcgatccgc gacgccgccg actcgatccg cgtcctggcc aacaacctcg atcaccgcac
      601 ggccgagatc acggtgggga tcagccgctt caccaattcc ggcagccgcc agttcgaggc
      661 cgccgccacg gaagcccgca agaccctcaa cgacgtcggc cgggccgtcc gcagcatcga
      721 aaaaaatccc aatcagctga tattcggtgg ccggccgtca cttccggagt acagtgggcg
      781 gcggtaaact ctgttagagg agcccgcgac gcagatctgc acaggttgga atgcgattcg
      841 tttcgaggcc ctcgcggcgg gctgttctcc ctctgatgtc gggtgtggcg atggccgcgc
      901 tggcgggagc gtgctcgtcg tctcccccca cgacctacga cctcagcgcg ccgcgccagg
      961 cggcgcgggg cgggggcggt tcgggggcgc agatcgccgt cgccgagccg gtcgccgtgc
     1021 aggcgctcga ggccgaccgc atcctcgtca aggattcctc gggcgctatc tcgacggtcg
     1081 ggggcgccca atgggccgac cggctgccgc gcctcatcca ggcccgcctg atccagacat
     1141 tcgagaacgc gtcccggatc agggccgtga gccgcccgag cgaccgcatc acgcccgact
     1201 atcagctgac cagcgagatc cgcgccttcc agatcgacgc cagcaccagt caggcggtcg
     1261 tcgagatgtc ggtgaagctc gtcaacgacc gcaacggccg catcgccacc gcgcgcgtgt
     1321 tctcggcgcg gtcgggggtg gcctcgatca atgccgagaa cgccaccaag gccctcgatc
     1381 gggccctgtc gagcgtcctg ctgcagatcg tgcgctgggt cgggacggga caggcgccgt
     1441 ccggggaagc gtccgtcatc gagcctccgt cgtccacggc cgagccatca tcgtccgccg
     1501 cgacggcgcc ggacgagagc gggacccctt cgagccaatc ggctcagctc tgatcctgcc
     1561 agaggcgcac cgccaacgcg ccaattcccg aacggcttct gcctgaccgg aggagggcgg
     1621 cttccgtcat tgccacctga cggggttgca aagctcgcgg tccgaccgcg agcttctgat
     1681 ccggcgcgtg gatagcgctt cgccgaaggc
//
LOCUS       DATAIQ010000391         2953 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_55562, whole genome shotgun sequence.
ACCESSION   DATAIQ010000391 DATAIQ010000000
VERSION     DATAIQ010000391.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2953)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2953)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2953
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_55562"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..202
                     /locus_tag="VHN20_06550"
     CDS             <1..202
                     /locus_tag="VHN20_06550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725461.1"
                     /translation="HEPQPHASSPRFGPRAFWNMIRRSRHGFAERPGPDQVRDHAIQK
                     QAHVTDPIDAITLSAASGSASA"
     gene            complement(165..1832)
                     /locus_tag="VHN20_06555"
     CDS             complement(165..1832)
                     /locus_tag="VHN20_06555"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I adenylate-forming enzyme family protein"
                     /protein_id="HEX2725462.1"
                     /translation="MSNTILTLLNAQRLDEFYASGFWRDQTIYAVARQHAEAAPDRFA
                     VRDRLRRISYGDLLARADAFADDLQRQGVRAGQRVAVWLPSRIEVAVALLACSRNGYI
                     CCPSLHRDHTMADVAALVRRMRAAALVTEAGYGADGADIVRELNEDPGLLPVYRLDPL
                     AREAQLQAGRALPGLAPGAAPLREPPPADPNRVVYLAFTSGTTGVPKGVMHSDNTLLA
                     NARAIAADWALGQETVIYSMSPLSHNLGFGALVTALLVGGELVVHDLPKGAPLLDRIL
                     EVEATYLVGVPTHAIDLLEELRKRGLTGLGAVKGFRISGASAPKEVVAELLRYGVVPQ
                     SGYGMTEASSHHYTLPTDDPRLIVETSGRVCPGYEIRIWSQDNPDVEVPTGQIGQIGG
                     RGASLMLGYFDDQAATEDSFNAHGWFMTGDLGWVDEAGYLRVTGRKKDLIIRGGHNIY
                     PAKIENLAMQHEAVERAAAVPVADMRLGEKVCLAVMLRAGREVSGAQLLEHLDASGLS
                     RYDMPEYFLQLDEIPLTASGKILKRDLVSSIQEGRLTPTPIRWQPRA"
     gene            complement(2013..>2953)
                     /locus_tag="VHN20_06560"
     CDS             complement(2013..>2953)
                     /locus_tag="VHN20_06560"
                     /EC_number="1.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004152 - dihydroorotate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="quinone-dependent dihydroorotate dehydrogenase"
                     /protein_id="HEX2725463.1"
                     /translation="LQSRVWDLDFPNPIGLAAGFDKDAEIFDALLSLGFGFVEVGTVT
                     PRPQPGNPKPRLFRLDEDRAIINRFGFNSLGLAPFKEHLRRAHSGGRGIIGANVGKNR
                     DSTDAAADYAEGIRELSASADYLVVNISSPNTPGLRALQAKAEIETLLERVLAARREG
                     AQGRAKAPPLLVKIAPDLGEDELGDIADATLASGVDGLIIGNTTVDRPAGLRSPHRSE
                     AGGLSGRPLMERSTACVASMYRLTRGHIPIIGCGGIASGDDAYAKIRAGASLVQVYSA
                     FVFDGPDLIPRIKADLADRLRRDGFGSVQAAVGADH"
BASE COUNT          494 a          993 c          993 g          473 t
ORIGIN      
        1 tcacgaacca caaccgcacg catcgtcacc tcgcttcggc cctcgggcct tttggaacat
       61 gatccggcga agtcgtcacg gcttcgccga aaggcctggc ccggatcagg tccgggatca
      121 tgcgattcaa aagcaggcac acgtgaccga tccgatcgac gcgatcacgc tctcggctgc
      181 cagcggatcg gcgtcggcgt gagacgccct tcctggatcg atgaaacgag gtcccgcttg
      241 aggatcttgc cgctcgccgt cagcgggatc tcgtcgagct ggagaaaata ttcgggcatg
      301 tcgtagcgcg acagcccgga ggcatcgaga tgctcgagca gttgcgcgcc gcttacctcc
      361 cggccggcgc gcagcatcac cgcaaggcag accttctcgc cgagccgcat gtccgcgacc
      421 ggcaccgctg ccgcccgttc gaccgcctca tgctgcatcg ccaggttctc gatcttcgcc
      481 ggatagatgt tgtggccgcc gcgaatgatc aggtccttct tgcgcccggt cacgcgcaga
      541 tatccggcct cgtcgaccca gccgagatcg ccggtcatga accagccatg cgcgttgaac
      601 gagtcctcgg tcgcggcctg gtcgtcgaaa taaccgagca tgaggctggc gccgcggccg
      661 ccgatctggc cgatctgccc ggtggggacc tcgacatcgg ggttgtcctg cgaccagatc
      721 ctgatctcgt agcccggaca cacacggccc gatgtctcga cgatcaagcg cggatcatcc
      781 gtcggcaagg tgtagtggtg cgagctcgcc tcggtcatcc cgtagccgct ctgcggaacg
      841 acgccgtaac gcaagagctc ggcgacgacc tccttgggcg ccgatgcgcc ggaaatgcgg
      901 aagcccttga ccgcgccgag cccggtcagg ccgcgtttgc gcaattcctc gagaagatcg
      961 atcgcgtgcg tcggcacgcc gaccagataa gtcgcttcca cttccaaaat gcggtcgaga
     1021 agcggagcgc ctttgggcag gtcgtgcacc acgagctcgc cgccgacgag cagggccgtc
     1081 accagcgcgc cgaagccgag gttatggctc aacgggctca tcgagtagat gaccgtttcc
     1141 tgaccgaggg cccagtcggc ggcgatggcc cgcgcattgg caagaagcgt gttgtcgctg
     1201 tgcatgacgc ctttggggac gcccgtggtt ccggacgtga aggcgagata gacgacccgg
     1261 ttcgggtctg ccggcggcgg ctcgcgcaag ggcgccgctc ctggcgccag gcccggaagg
     1321 gcccgccctg cctgaagctg cgcctcgcgc gccagcggat cgagccggta gacgggcagc
     1381 agtcccggat cctcgttcag ctcgcgcacg atgtcggcac cgtccgctcc gtagccggct
     1441 tcggtgacga gggcggcggc gcgcatgcgc ctgaccaggg cggcgacatc ggccatcgtg
     1501 tgatcgcggt gcagggacgg gcaacagatg tagccgttgc gcgagcacgc gagcaacgcg
     1561 accgccacct cgatgcggct cggcagccac acggcgacgc gctggcccgc gcgcacgccc
     1621 tggcgctgga gatcgtcggc gaaagcatcg gcccgcgcaa gcagatcgcc gtagctgatc
     1681 cggcgcagac ggtcgcggac cgcgaagcgg tcgggcgccg cctcggcatg ctgacgcgcc
     1741 accgcataga tcgtctgatc gcgccagaag ccggacgcgt agaactcgtc gagtcgctgt
     1801 gcgttcagca gggtgagaat ggtgttgctc ataacgctct tggtcgtcgc ttattgcggc
     1861 ggcaggagcg tgcccgcacc agcgtgcagc gccaccgaca actcaagcct caaactcccc
     1921 ccgctcccac tattggtcgc tgcacagctt ggccgcaagc agaaatcggg tgaagtcccg
     1981 cgctccatgc aaggggggaa tgtaatccag gttcagtgat cggcgccgac ggcggcttga
     2041 acagatccga aaccgtcgcg gcgcagccgg tcggcgaggt cggccttgat cctcggaatc
     2101 aggtccgggc catcgaacac gaaggcggaa tagacctgca caagggatgc gcccgcgcgg
     2161 atcttcgcat acgcgtcgtc gccgctggcg atgccgccgc agccgatgat cgggatatgc
     2221 cccctggtga gccggtacat gctggcgacg caggcggtcg agcgctccat caagggacga
     2281 cccgacaggc ccccggcctc gcttcggtgc gggctgcgca accccgccgg cctgtccacg
     2341 gtcgtattgc cgatgatcag gccgtcgacg ccgctggcaa gcgtcgcgtc ggcgatgtcc
     2401 ccgagttcat cctcgccgag gtcgggcgcg atcttcacga gcagcggagg cgccttggct
     2461 cgcccttgcg cgccctcccg ccgcgccgcg aggacgcgct cgagcagcgt ctcgatctcc
     2521 gctttcgcct gcagggcacg caggccaggc gtattgggcg acgagatgtt gacgacgagg
     2581 tagtctgcac tggcgctgag ctcgcggatg ccttccgcgt agtcggcggc cgcgtcggtg
     2641 ctgtcgcggt tcttgccgac attggcgccg atgatgccgc ggcccccgga atgggcgcgg
     2701 cgcagatgtt ccttgaacgg cgccagcccg aggctgttga agccgaagcg gttgatgatt
     2761 gcccggtcct cgtcgagccg gaacaggcgc ggcttcgggt tgcccggttg cggacgcggc
     2821 gtcaccgtcc cgacctcgac gaagccgaag ccgagcgaga gcagcgcatc gaagatctcc
     2881 gcatccttgt cgaagccggc ggcgagaccg atcgggttgg gaaaatcgag gtcccagacc
     2941 cgcgactgca gga
//
LOCUS       DATAIQ010000392         2706 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_389946, whole genome shotgun sequence.
ACCESSION   DATAIQ010000392 DATAIQ010000000
VERSION     DATAIQ010000392.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2706)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2706)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2706
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_389946"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..551)
                     /locus_tag="VHN20_06565"
     CDS             complement(<1..551)
                     /locus_tag="VHN20_06565"
                     /inference="COORDINATES: protein motif:HMM:NF015857.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OmpW family outer membrane protein"
                     /protein_id="HEX2725464.1"
                     /translation="MIRNSLAAMVLLLPVLGAAATRASAADMPAEAPVAAPVLAFKRP
                     PSFYVHVGAAGVILDEGAKINVAGNRLVGGDVSIKPQLTPAVEVGYFFTPELAVSFTG
                     GYPPKIKVEAAGALNGMGLVGRSTYGPMTLTAHYHFQGLGRFQPYVGLGASFMVVFDR
                     TDGLMTKLEIDNAAGIALQAGVD"
     gene            complement(633..2447)
                     /locus_tag="VHN20_06570"
     CDS             complement(633..2447)
                     /locus_tag="VHN20_06570"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEX2725465.1"
                     /translation="MARPRLLIVDDIADNRAVLARRFERRGFEIAEADGGNRALELVA
                     QQSFDLVLLDVMMPDIDGMEVLRRLREQHSPVSLPIIMVTAKSQSEDVVKALELGAND
                     YVTKPVDFAVALARANTQIGRKRAEEEVRLANDALRMMNEQLEQRVAERTESLASAND
                     RLRLEIEHRRQSEEKVHYLAHHDALTGLGNRVLLRQQLEEALVRTRRNGGAVAMICLD
                     LDGFKGVNDALGHSVGDALLKSVAARLQENVRDTDKVARLGGDEFAVLQSGDSQPRSA
                     DALSGRLVAVMSEPFFIEGHQINISLSAGIAVSSGNDVDPEELLKNADLALYRAKADG
                     RGTYRFFEPEMDALAQARRSMEVELRGALTRREFELHYQPLINLRTRKIAGFEALLRW
                     SNATRGFISPGQFIPLAEELGLIAPIGEWAIRQACEHAAGWPGDTKVAVNLSPVQFRS
                     TSLVPAVVQALSASGLAPGRLELEITESVLLDDSDRNLAILRQIRELGVRIAMDDFGT
                     GYSSLSYLRRFHFEKVKIDRSFISDVAKNAESRAIVRAITGMCSNLGMATTAEGVETA
                     EQLGCVTSEGCTEAQGYYFSPAKPVAEVGALLAKFGRV"
BASE COUNT          457 a          911 c          880 g          458 t
ORIGIN      
        1 taatcgacgc ccgcctgcag ggcgatgccc gcggcgttgt cgatctcgag cttggtcatg
       61 aggccgtcgg tcctgtcgaa cacgaccatg aaggaggccc ccagaccgac atacggctgg
      121 aaccgaccaa ggccctgaaa gtgataatgc gccgtcaagg tcatcgggcc atacgtgctg
      181 cggccgacga ggcccatgcc gttcaaggct ccggcagctt cgaccttgat tttcggcggg
      241 tatccgcccg tgaaggagac tgccagctcg ggcgtgaaga agtaacccac ttcgacggcg
      301 ggcgtcagct gcggcttgat cgagacgtcg cccccgacga ggcggtttcc ggcgacgttg
      361 atcttggcgc cctcgtcgag aatgaccccc gcggcgccga catggacgta gaagctcggc
      421 gggcgtttga acgcaagaac gggcgccgcc acgggcgcct cggcaggcat atcggcggcc
      481 gaggcacggg ttgcggcggc tcccagcacc gggagcagca gcaccatcgc cgccaagctg
      541 ttccgaatca tcgcgcccct ctgcagaatc gctcgttctc gattgttaag gaggagcatt
      601 aacaaaccgt ttgcgctggt ggggcaatgc ggtcacacgc gcccaaattt cgcgagcagc
      661 gcgccgactt cggcgaccgg cttggccggg ctgaagtaat acccttgcgc ctcagtgcag
      721 ccttccgacg tgacgcagcc cagctgctcc gcggtctcga ccccttccgc agtcgtcgcc
      781 atgccgagat tgctgcacat gccggtgatc gcccgcacga tcgcccggct ctcggcattt
      841 tttgcaacgt cactgatgaa cgagcggtca atcttgacct tctcgaagtg gaatcgccgc
      901 aagtagctca ggctcgagta gccggtgccg aagtcatcca tcgcgatgcg gaccccgagc
      961 tcccgaatct gccgcaggat ggcgaggttc ctgtcgctgt cgtcgagcag caccgactcg
     1021 gtgatctcca gctcgaggcg gcctggcgcg aggccggatg ccgatagcgc ctggacgacc
     1081 gccggcacca ggctggtgct gcggaattgc accggagaga ggttcacggc gaccttcgtg
     1141 tctccgggcc agccggcagc gtgctcgcac gcctgcctga tagcccattc gccgatcgga
     1201 gcgatcaagc cgagctcttc ggcaagggga atgaactggc ctggcgaaat gaagcctcgc
     1261 gtggcattcg accatcgcag caaggcctcg aagccggcga tcttgcgcgt gcgcagattg
     1321 atgagcggct ggtagtgcag ctcgaattcg cgccgtgtca gcgcgccgcg cagctcgacc
     1381 tccatagagc ggcgtgcctg cgcgagcgca tccatttcgg gctcgaagaa ccggtaggtg
     1441 ccgcgtccat cggccttcgc ccgatacaac gcgagatcgg cgttcttgag cagctcctcg
     1501 ggatcgacat cgttgccgga gctcacggca atgccggcgc tcagcgagat attgatctgg
     1561 tgaccttcga tgaagaacgg ctcgctcatc acggcgacga gacgcccgga gagcgcgtcg
     1621 gcgctgcgcg gctggctatc tccgctctgc aggacggcga actcgtcacc cccgagacgg
     1681 gcgaccttat ccgtgtcgcg cacgttctcc tgcagtcgtg cggccaccga cttgagcagc
     1741 gcgtcgccga ccgagtggcc gagggcgtcg ttgacgccct tgaagccgtc gaggtccagg
     1801 cagatcatgg cgactgcccc gccgttgcgc cgggtacgga ccagtgcctc ctccagctgc
     1861 tggcggagaa ggactcggtt gccaaggccc gtcaacgcgt cgtggtgggc aagatagtgg
     1921 accttctcct cggactgccg ccggtgttcg atctcgaggc gcagccggtc gttcgcagag
     1981 gccaggcttt cggtccgctc ggcgacacgc tgctcgagct gctcgttcat catgcgcagc
     2041 gcgtcgttgg cgagcctgac ctcctcctcc gcccgcttcc ggccgatttg cgtgttggcc
     2101 cgggccaggg ccaccgcgaa gtccacgggc ttggtcacgt agtcattggc gcccagctcc
     2161 agcgccttca cgacgtcctc gctctggctc ttggccgtga ccatgatgat cggaagcgag
     2221 acgggcgagt gctgctcgcg cagccgcctg agcacttcca tgccgtcgat gtcgggcatc
     2281 atcacatcga gcaggacgag atcgaaggac tgctgggcga cgagctcgag ggcacgattc
     2341 ccgccatccg cctcggcgat ctcaaagccc cggcgctcga accgccgggc cagcacggcg
     2401 cggttatcgg cgatgtcgtc gacgatcagc agccgcggcc gcgccacggc cgccggcgca
     2461 tcgtcggcct ctggtgcagg cggggcaacc ggcctgtcgg tcttcagagc gaatcccgct
     2521 gcggacatgg ccttagacca cgaccaacgc gggcgcagcg gccgcaacgg ccggcgccga
     2581 gaccgttgtg gactgccccg cgtcctgctc ctcgggcgtc aacacagccg gcaggcgaat
     2641 cgtgaagcac gaaccgcgcc caagctcact gtgcaccgaa atgccgccgc ccatgatcgc
     2701 gcagag
//
LOCUS       DATAIQ010000393         2217 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_389970, whole genome shotgun sequence.
ACCESSION   DATAIQ010000393 DATAIQ010000000
VERSION     DATAIQ010000393.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2217)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2217)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2217
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_389970"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(59..964)
                     /locus_tag="VHN20_06575"
     CDS             complement(59..964)
                     /locus_tag="VHN20_06575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX2725466.1"
                     /translation="MNRRVAAWLGASLVAALGLGGLKPARAQDALPPGPGMFAMRLEQ
                     VGANDDPMRVFVYRPARWTRDDRIVIVMHGRERDADRYRDEWQPHAEEHNLLLVVPEF
                     SNAKFPGAGTYNFGNVSDRKARPLPRAAWTFGVIDKVFAEAKARSGARRDRYSFFGHS
                     AGAQFVHRYLLFAGASSADLIIAANAGAYTMPTQEVDFPWGLKGVGVTRADLAGAFAR
                     NVVILLGGRDTDPNHATLPRNPGAVAQGPHRLARGEKFFATGKATAEALGAPFRWRLE
                     IVPGVAHSNKGMSARAAAIIAAGGS"
     gene            1396..1824
                     /locus_tag="VHN20_06580"
     CDS             1396..1824
                     /locus_tag="VHN20_06580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013945933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HEX2725467.1"
                     /translation="MSADTQRWDMSDARNWMLAEAIEALARAERMHQHFFQLRKTETR
                     TPAWEPPVDVLETEREVLIIVALPGVDPDEVEAKLGPGDLIVSGRRVLPPELRTAVIH
                     RLELPQGRFERRIPLPPGRYSAVRRFPANGCAVFGLEKAV"
     gene            1868..>2217
                     /locus_tag="VHN20_06585"
     CDS             1868..>2217
                     /locus_tag="VHN20_06585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013945932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LON peptidase substrate-binding
                     domain-containing protein"
                     /protein_id="HEX2725468.1"
                     /translation="MEPATSGPSPRSDGPASVPLPPDVMIIVPVRNTVLFPNTIAPIT
                     IGRDRSMAAAQQAVREERPVGILLQRDPEVDDPGPADLHRVGTIANIVRYITAPDGTH
                     HIVTQGVQRFRIVD"
BASE COUNT          352 a          764 c          753 g          348 t
ORIGIN      
        1 atgcccggag gtcgctcgca tttgcctcaa attgctgagg ttcgtccctc aagggcgctc
       61 acgatccgcc ggccgcgatg atcgccgcgg cccgcgccga catgcctttg ttggaatgcg
      121 ccacgccggg cacgatctcg agccgccagc ggaacggcgc gccgagcgct tccgcggtcg
      181 cctttccggt cgcgaagaat ttttcgccgc gcgccaggcg atgcggccct tgcgccacgg
      241 cgccgggatt gcgcggcagg gtcgcatggt tcgggtcggt gtcgcggccg ccgagcagga
      301 tgacgacgtt gcgcgcgaag gcgccggcga ggtcggcgcg cgtgacgccg acgcccttca
      361 ggccccacgg gaagtcgacc tcctgcgtcg gcatggtgta ggcgccggca ttggcggcga
      421 tgatcaggtc ggcgctgctg gcgccggcga agagcagata gcggtgcacg aactgggccc
      481 cggcggagtg cccgaaaaag ctgtagcggt cgcgccgcgc gccgctgcgg gccttcgctt
      541 ccgcgaacac cttgtcgatc acgccgaagg tccaggccgc gcgcggcagc ggcctcgcct
      601 tgcggtccga gacgttgccg aaattatacg tgccggcgcc cgggaatttt gcgttcgaga
      661 attccgggac gacgagcagc aggttgtgct cctcggcgtg cggctgccac tcgtcgcggt
      721 agcggtcggc gtcgcgttcg cggccgtgca tcacgatgac gatgcggtcg tccctggtcc
      781 agcgcgccgg ccggtagacg aagacgcgca tcggatcgtc gttggcgccg acctgctcga
      841 gccgcatcgc gaacatgccc ggcccgggcg gcagcgcatc ctgcgcacgc gcgggcttca
      901 ggccaccgag cccgagcgcg gcaaccaggc ttgcgccaag ccaggccgca acacgtctgt
      961 tcatggctcg cccacaccgt tgcacctgca gttcaccctg ccaccctcgc gtgcaaccgt
     1021 caaagctgac gcgcaacggc gcgtgcccct ggagcatgat ccggcaaagt gggcaccgct
     1081 ttgccggaaa agatcatgcg acacaaagag aaacagagca ggatcaattc aatctgaatt
     1141 gatcatgctc tggcgcgagg acgacggaac gcacggagcg cgcgtcggtc cggagcggaa
     1201 caattcggac atgtgcctgc tgccttgccc gggctttttt accgtcacga tgaaacatcg
     1261 cggagccgcc cggcgtttgg cttcgatgcc ggcttggcct cggcctgccc cgctacgctt
     1321 gcgacaacgg cgctgactga gtgttcgccg tgatacatgc gggcgcgcgt cgcaaagcgc
     1381 gaagcgtggg gccatatgag tgccgatacg caaaggtggg acatgtcgga cgcgcgcaac
     1441 tggatgctgg ccgaggcgat cgaggcgctg gcacgcgccg agcgcatgca tcagcatttc
     1501 ttccagctcc ggaaaaccga gacgcggacg ccggcctggg agccgcccgt cgacgtgctc
     1561 gagaccgagc gcgaagtcct gatcatcgtg gcgctgccgg gcgtcgaccc ggacgaggtc
     1621 gaggcgaagc tgggcccggg cgatcttatc gtcagcggcc ggcgcgtcct gccgcccgaa
     1681 ttgcgcaccg cggtgatcca ccgcctcgag ctgccgcaag gccgcttcga gcgacgcatt
     1741 ccgctgccgc ccggccgcta cagcgccgtg cggcgcttcc ccgccaatgg ctgcgccgtg
     1801 ttcggcctcg agaaagcggt gtgagatgat gacctcggaa aattccggac tgttgtcccc
     1861 ggggcagatg gagccggcga cctccggccc ctcccctcgc tcggacggcc cggcctcggt
     1921 gccgctgccg ccggacgtga tgatcatcgt tccggtgcgc aacacagtgt tgttccccaa
     1981 caccatcgcg cccatcacga tcgggcgcga ccggtcgatg gcggcggcgc agcaggcggt
     2041 gcgcgaggag cgcccggtgg gcatcctgct gcagcgcgac cccgaggtgg acgatcccgg
     2101 ccccgccgat ctccaccgcg tcggaacgat cgccaacatc gttcgctaca tcaccgctcc
     2161 cgacggcacg caccacatcg tgacgcaagg cgtgcagcgc ttccgcatcg tcgattt
//
LOCUS       DATAIQ010000394         1615 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_21081, whole genome shotgun sequence.
ACCESSION   DATAIQ010000394 DATAIQ010000000
VERSION     DATAIQ010000394.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1615)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1615)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1615
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21081"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..443)
                     /locus_tag="VHN20_06590"
     CDS             complement(<1..443)
                     /locus_tag="VHN20_06590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725469.1"
                     /translation="MRSDDHQGEGAAPARARGPAVWLGMDQPELDDAYDQRVYAPNRD
                     HIADRRLANNEKVRAIIGSPERVAYGDAEIEGVDIYRTTQPDAPVNIFVHGGAWKGGR
                     SAQAAYLAEPVIRAGAHFVAVDFNNVLETGGDLFPMVDQVRRALA"
     gene            610..>1615
                     /locus_tag="VHN20_06595"
     CDS             610..>1615
                     /locus_tag="VHN20_06595"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEX2725470.1"
                     /translation="MLRSTMSRVLSAAAAAAVAFAQAAPAQTGAEFYKGKTVTYIVAT
                     GPGGGYDTYGRLVAEFMQKHLPGTTFVVKNVPGAGHLVGANTIYASRADGLTIGTFNT
                     GLIYNQLIGNEGVKFDLNKMSWIGKAGADPRVVMVSAHTPFKTLADLQGSKSEILFAV
                     GGAGSATFVETMVLINALKLPARRLTGYVANDDQMAMRRGEIHAAVGARSTYEEFVKN
                     GFGRYIIQIGGTETDVPQLGGMVSDPTSAALLSLIRSQAEISRLTAGPPGIPADRLEA
                     LRTAYMNALNDEELKARAAKLGRPVEPAGGEEVAKLVKAALDQTPDTISLIKEGMKTE
                     K"
BASE COUNT          267 a          563 c          550 g          235 t
ORIGIN      
        1 caggcgagcg cgcgcctgac ctggtcgacc atcgggaaca ggtcgccgcc ggtctcgagc
       61 acgttgttga aatcgacggc gacgaaatgc gcgcccgccc tgatcacggg ctcggcgaga
      121 taagcggcct gcgccgagcg cccgcctttc caggcgccgc catggacgaa gatgttgacc
      181 ggtgcgtcgg gctgcgtggt gcgatagatg tcgacgcctt cgatctccgc gtcgccgtag
      241 gcgacgcgct cggggctgcc gatgatggcg cgcacctttt cgttgttggc gaggcgccgg
      301 tcggcaatgt ggtcgcggtt gggcgcgtag acgcgctggt cataggcgtc gtcgagctcg
      361 ggctggtcca tgccgagcca gacggccggc cctctggcac gcgccggcgc tgccccctcg
      421 ccctgatgat cgtcgctgcg catgcatccc ctcccaagcc ggcggcgaag gtagcccggc
      481 gccctcccct gtcaaagcgc gcttgcaagc ccgccgcgcc ctcccctacc ctgccgtaaa
      541 cgcgggctgc cccgggcgga gaccgcgatg cgacgggcgc gaaagcccgc ggcttcggga
      601 ggagatggaa tgctcaggtc gacgatgtca cgcgtcctgt cggcggcggc ggcggcggcg
      661 gttgcgttcg cgcaagccgc acccgcccag acgggcgccg agttctataa aggcaagacg
      721 gtcacctata tcgtcgccac cggtcccggc ggcggctacg acacctacgg gcggctcgtc
      781 gccgagttca tgcagaagca ccttcccggc accacgttcg tggtcaagaa cgtccccgga
      841 gcgggccacc tcgtcggcgc caacaccatc tacgcgtcgc gggcggacgg actcaccatc
      901 ggcaccttca acaccggcct catctacaac cagctgatcg gcaacgaggg cgtcaagttc
      961 gacctcaaca agatgtcgtg gatcggcaag gccggcgccg acccgcgcgt cgtgatggtg
     1021 tcggcgcaca cgccgttcaa gacgctggcc gaccttcagg gcagcaagag cgagatcctg
     1081 ttcgcggtcg gcggcgccgg cagcgccacg ttcgtcgaaa cgatggtgct gatcaacgcc
     1141 ctgaagctgc cggcgcggcg cctcaccggc tatgtcgcca atgacgacca gatggccatg
     1201 cgccgcggcg agatccatgc ggccgtcggc gcgcgctcga cctacgagga gttcgtgaag
     1261 aacggctttg gccgctacat catccagatc ggcggcaccg agacggacgt gccgcagctc
     1321 ggcggcatgg tgtcggaccc gacctcggcg gccctgctgt cgctgatccg ctcgcaggcc
     1381 gagatctcgc ggctgaccgc cgggccgccc ggcatcccgg ccgatcgcct cgaggcgctg
     1441 cgcaccgcct acatgaatgc cctcaacgac gaggagctca aggccagggc cgcgaagctg
     1501 gggcggcccg tcgagccggc gggcggcgag gaggtcgcca agctggtcaa ggccgcgctc
     1561 gatcagaccc cagacacgat cagtctgatc aaggaaggca tgaagaccga gaaat
//
LOCUS       DATAIQ010000395         2634 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_298312, whole genome shotgun sequence.
ACCESSION   DATAIQ010000395 DATAIQ010000000
VERSION     DATAIQ010000395.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2634)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2634)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2634
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_298312"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(14..229)
                     /locus_tag="VHN20_06600"
     CDS             complement(14..229)
                     /locus_tag="VHN20_06600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725471.1"
                     /translation="MTRTAALRASVLFVLIALIFGAVGAGSHAVAAQALSLIGSILFV
                     LMLAFWLAPVPEHRPLAVRVRRPRALR"
     gene            421..597
                     /locus_tag="VHN20_06605"
     CDS             421..597
                     /locus_tag="VHN20_06605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1328 domain-containing protein"
                     /protein_id="HEX2725472.1"
                     /translation="MLGWAITFLLVALVAAVFGFGGIAGTAVEIAKLIFFVAIVLFAI
                     SAVIGLLRGRSPTI"
     gene            complement(726..1271)
                     /locus_tag="VHN20_06610"
     CDS             complement(726..1271)
                     /locus_tag="VHN20_06610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009494618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEX2725473.1"
                     /translation="MTPEPAIRDALLAAVPSLRAFAISLCGQVDRADDLVQDTLLRAL
                     SHIDRFERGTNLNAWLFTILRNLFHSEYRKRRREVEDPDGSYAGRLKVQPEQGSRLDF
                     EDFRTALAKLPADQREALLLVGASGFSYEEAANICGCAVGTIKSRVNRARSRLANLLA
                     VDDVEDLGPDRMTRAALQAIS"
     gene            complement(1268..1501)
                     /locus_tag="VHN20_06615"
     CDS             complement(1268..1501)
                     /locus_tag="VHN20_06615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013504098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016989 - sigma factor antagonist activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NepR family anti-sigma factor"
                     /protein_id="HEX2725474.1"
                     /translation="MTKGRKLAAVIPDDGPSARLSSENVPTEPTLDRNVQARIGDNLR
                     AMYDELLRQPVPDRFKDLIGQLENERKQKEQSR"
     gene            1680..2477
                     /locus_tag="VHN20_06620"
     CDS             1680..2477
                     /locus_tag="VHN20_06620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019904850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX2725475.1"
                     /translation="MSTAQLVVQHLPYLRRYARALTGSQMAGDAYVAATLETLVSEPD
                     TITQGGNVKVELFGIFTRIWNSLSVNGRSEQIQRDLPAEVRIGQITPLPRQAFLLSCL
                     EGFSEEEVASILSVDTDTVRQLVDEAGRELAADMATDILIIEDEPLIAMDLEALVEGL
                     GHNVTGVARTRTEAVKLAATKRPGLILADIQLADGSSGLDAVNDLLKSFEVPVIFITA
                     YPERFLTGERPEPAFLIAKPFQPANVSAVISQALFFQQSARRRAVPA"
BASE COUNT          451 a          846 c          868 g          469 t
ORIGIN      
        1 attaccctga aggtcagcgc aaagcgcgcg gccggcggac gcgcacggcg agcggcctgt
       61 gctccgggac cggcgccagc cagaaggcca gcatcagcac gaaaagaatg ctgccgatca
      121 gcgacagggc ctgcgcggcg acggcgtggg acccggcgcc tacggcgccg aagatgaggg
      181 cgatcaggac gaacaagacg ctggcgcgca gggcggcggt tcgggtcata aggggcctcc
      241 aggttcgggc tttcaacgtg gcgcccgatc gagagttcca agcggggaag taaaaccctg
      301 cgccaccaca gtgcggaaag tattcgcagg accgtctcgt agacagcgga actgggacgt
      361 agggttcgcg ttgtcacggc ataggtcggg gcgtccgacc ctgtgtaaag cgaggtagtc
      421 atgcttggct gggcaatcac cttccttctg gtcgccttgg tggcggccgt gttcgggttc
      481 ggcggcattg ccggaaccgc ggtggaaatc gcgaagttga tcttcttcgt cgcgatcgtc
      541 ctgttcgcca tctcggcggt gatcgggctc ctccggggcc gcagtccgac gatatagtag
      601 gacgtccaaa gtaaaacgcc gcctcggctt gccgaggcgg cgttttttat tgtccgagac
      661 gcgggagcgt ccgtcggcga gcgcgcccgc cccggctcca gtccggggca ggcatggcat
      721 gggtgtcagc tgatggcctg cagagccgct cgcgtcatcc ggtccgggcc gagatcctcg
      781 acatcgtcga ccgcgagcag gttggccagg cgcgagcgcg cccggttgac ccggctcttg
      841 atggtgccga cggcgcagcc gcagatgttg gccgcttcct cgtaggagaa gcctgacgcg
      901 cccacgagca gaagggcctc gcgctggtcg gcggggagtt tcgccagcgc ggtccgaaag
      961 tcctcgaaat cgaggcgcga tccctgctcg ggctggacct tgaggcggcc cgcgtaagag
     1021 ccgtccggat cctccacctc acgccgccgc ttgcggtatt cggagtgaaa caggttgcgc
     1081 aggatcgtga agagccacgc gttgaggttc gtgccgcgct cgaaacggtc gatatgcgag
     1141 agggcgcgaa gcagggtgtc ctgaacgaga tcgtcggcgc ggtcgacctg gccgcacaac
     1201 gagatcgcga aggcgcgcag gctgggcact gccgccagaa gagcatcccg aatggccggt
     1261 tccggcgtca tcggctctgc tccttctgct ttcgctcgtt ttccaactgc ccgatcaggt
     1321 ccttgaaacg gtcagggacg ggctgcctga gaagctcgtc gtacatggcc cgcaggttgt
     1381 caccgatgcg ggcctgaacg ttgcggtcga gggtgggctc ggtgggtaca ttttcggaac
     1441 tgagacgcgc cgaagggcca tcgtccggga tcacggctgc caactttctt ccctttgtca
     1501 tgtggtctcc cctgtgtcgg cgtggccgtt aactatttgt agcttggcca tttttttgcg
     1561 cattttgggc gttaacgcgc atagctccgg gtagttcctc gcatctggaa ctttttttga
     1621 catgctgagt tagctaggct ctatcggcac attgaccaaa cgtcattaag gggatgctaa
     1681 tgtcgacagc ccagctcgtc gtccaacacc tgccgtacct gcgccgctat gcccgcgcgc
     1741 tgaccggaag ccaaatggcg ggcgacgcct atgtcgcagc aaccctcgaa accctcgtca
     1801 gcgagccgga cacgatcacc cagggcggca acgtcaaggt cgagctgttc ggaatcttca
     1861 cccggatctg gaactcgctc tcggtcaacg ggcgcagcga gcagatccag cgcgacctgc
     1921 cggccgaggt ccggatcggc cagatcacgc cgctgccgcg ccaggccttc ctgctctcct
     1981 gcctcgaggg cttctcggag gaagaggtcg cctccatcct gagcgtcgac accgacaccg
     2041 tccggcagct cgtcgacgag gccggccgcg agctcgccgc cgacatggcg accgatatcc
     2101 tgatcatcga ggatgagccc ctgatcgcca tggacctcga ggccctggtc gaggggctcg
     2161 ggcacaacgt caccggcgtc gcgcgcaccc gcaccgaggc cgtgaagctg gccgccacca
     2221 agcgtccggg cctcatcctg gccgatatcc agctcgccga cggcagctcg ggcctcgacg
     2281 ccgtcaacga cctgctcaag tccttcgagg tgccggtgat cttcatcacg gcctatcccg
     2341 agcgcttcct gaccggcgag cgtcccgagc cggccttcct gatcgccaag ccgttccagc
     2401 cggccaacgt ctcggccgtg atcagccagg cgctgttctt ccagcagagc gcccgccgcc
     2461 gcgcggttcc tgcttgacgg ggccggcctc acggccgacg gcctgtttgc ctggggcgcc
     2521 tcacccttgg atcgcgcacg aaaaagacgg gccagaatct gacccgtctt aaagtaaccg
     2581 gccaatgcag aaggggaatg cggggaggac caggtggccg ggtatctcga taac
//
LOCUS       DATAIQ010000396         2369 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_194155, whole genome shotgun sequence.
ACCESSION   DATAIQ010000396 DATAIQ010000000
VERSION     DATAIQ010000396.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2369)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2369)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2369
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_194155"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..721)
                     /locus_tag="VHN20_06625"
     CDS             complement(<1..721)
                     /locus_tag="VHN20_06625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015951305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX2725476.1"
                     /translation="MEAARPDLVTRLLRRDAPLVPVESASSRALVGVIAILTFLAALC
                     AGMVELVASSSVQWRSAVGQEATVQVRPNPRRNIEADLAQVAELARRIPGVADVHVVD
                     KAESERMLEPWLGRGLDLSDLPVPRLVVLKLQDGVAPDFTELRALLVERVPTATLDDH
                     AGWVSRLSTMASTVVIAGVVLALLVLAAAALAVAFATHGAMAGNREVVEVLHFVGAHD
                     RFIAREFQRRFFRLGLKGGLIG"
     gene            complement(798..1490)
                     /gene="ftsE"
                     /locus_tag="VHN20_06630"
     CDS             complement(798..1490)
                     /gene="ftsE"
                     /locus_tag="VHN20_06630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020093599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division ATP-binding protein FtsE"
                     /protein_id="HEX2725477.1"
                     /translation="MQQRPIAPDLPVVHFENVGIRYGMGPEVLRDLTFSIAPRSFQFL
                     TGPSGAGKTTLLRLILLSVKPTRGLISVFGEEVSRISKGTLTGLRRRMGVVFQDFRLL
                     DHLTIFENVALPLRVQGQEEARYRKEVVELLRWVGLGERMHVLPPVLSGGEKQRAAIA
                     RALIVRPELLLADEPTGNVDPSLGRRLLRLFVELNRLGTSVLIATHDLALMDQLEARR
                     LVLGDGHLHIDE"
     gene            1570..2328
                     /locus_tag="VHN20_06635"
     CDS             1570..2328
                     /locus_tag="VHN20_06635"
                     /inference="COORDINATES: protein motif:HMM:TIGR02098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MJ0042-type zinc finger domain-containing
                     protein"
                     /protein_id="HEX2725478.1"
                     /translation="MVIVCPSCASEYIIDPARLGGDGRTVRCANCRTTWFVTAEEASG
                     VDAAEGAFEDQPGWDDARNEAGPERRPSYAPDPQKEAAGRGRRERAFSFAKLASSRAA
                     RRAAVALVMIGCFALPFLVVGSRARVVEALPGTAKLYAGVGLPVNLRGLEFRGMKSEL
                     VAAGADIVLVVEGEVANITGRDATVPPIEISVRGAEGQMLYTWTNDAPRAVLGPSETA
                     SFRARLTAPPEGARHVLVHFAARGDGAAAVSRIR"
BASE COUNT          405 a          785 c          824 g          355 t
ORIGIN      
        1 cgccgatcag gccgcctttc aggccgagcc ggaagaagcg gcgctgaaat tcgcgggcga
       61 tgaagcggtc gtgggccccg acgaaatgca gcacctcgac gacctcgcga ttgccggcca
      121 tggcgccatg agtcgcgaac gccaccgcga gcgccgcggc ggccagcacg aggagggcca
      181 ggacaacgcc cgcgatgacg acggtgctgg ccatggtcga caatcgcgac acccagccgg
      241 catggtcgtc gagcgtggcg gttgggaccc gctcgacaag cagcgcgcgc agctcggtaa
      301 agtcgggcgc gacgccgtcc tggagcttga ggacgacgag gcgcggcacc ggaaggtccg
      361 agaggtcgag accgcgcccc agccaaggtt cgagcatgcg ctcggattcg gccttgtcga
      421 ccacgtgcac gtcggcgacg cccgggatgc gccgggccag ctccgcgacc tgcgcgaggt
      481 ccgcctcgat attgcggcgc gggttggggc ggacctgcac ggtcgcctcc tggccgaccg
      541 cggagcgcca ctggaccgag ctcgacgcga caagctccac catgccggca caaagcgccg
      601 ccaggaaggt caggatcgcg atcaccccga cgagggcccg actcgatgcc gactcgaccg
      661 gcaccagcgg ggcgtcgcgc ctgagcaggc gcgtcacgag atcgggccgc gccgcctcca
      721 tgccgtcccg gcgatctggc cgacgcttcg cgtggcgatc gctttggcga ggcgcggtcg
      781 cgggaacctc catcgcgcta ctcgtcgata tgcagatgcc cgtctccgag cacgaggcgg
      841 cgcgcttcga gctggtccat cagggcaagg tcatgggttg cgatcaggac ggacgtgccg
      901 aggcgattga gctcgacgaa cagacgcagc agccgccggc cgagcgatgg atcgacgtta
      961 ccggtgggct cgtcggcgag cagcagctcc gggcgcacga tcagcgcgcg ggcgatcgcc
     1021 gcccgctgct tttcgccgcc ggacagaacc ggcggcagca catgcatgcg ctcgccgagg
     1081 ccgacccagc gcaacagctc gaccacctcc ttgcggtagc gcgcctcctc ctgtccctgc
     1141 acgcgcaggg gcagggcgac gttctcgaag atcgtcaggt gatcgagaag gcggaaatcc
     1201 tggaacacca cgcccatgcg ccgacgcaag ccggtcagcg tgcccttgga gatgcggctc
     1261 acctcctcgc cgaacaccga gatgagacca cgtgtcggct ttaccgagag caggatcagg
     1321 cgcaacaggg tcgtcttgcc ggctcccgac ggaccggtga gaaactggaa cgagcgcggc
     1381 gcgatcgaga aggtcaggtc gcgaagcacc tccggaccca tcccgtagcg gatcccgaca
     1441 ttctcgaaat gcaccacagg aaggtcgggc gcaatcgggc gttgttgcag ttctttcact
     1501 cgccattaac caagtcgatg aaggaatatt ctgaaccgag ccgcgcccca gctggctcgc
     1561 tgattcgtca tggtcatcgt ctgtccttct tgcgcaagtg aatatatcat cgacccggca
     1621 cggctcggcg gggatggccg taccgtgcgc tgcgcaaact gccgtacgac atggttcgtc
     1681 acggccgaag aggcgtcggg cgtcgatgca gccgaggggg ctttcgagga tcagcccggc
     1741 tgggacgacg ctcggaacga ggcaggaccg gagcgtcgtc ccagctacgc gcctgacccg
     1801 cagaaggagg ccgcaggccg tgggcggcgg gaacgagcct tctcgttcgc caagcttgcc
     1861 tcctcgcgtg ccgcccgccg cgccgccgtg gcattggtga tgatcggctg cttcgcgctt
     1921 ccgttcctgg tcgttggcag ccgcgcccgt gtggtcgagg ctctgcccgg aacggcgaag
     1981 ctgtatgccg gcgtcggact tccggtcaat ctgcggggcc ttgaattccg ggggatgaaa
     2041 tccgagttgg tggcggcggg cgccgatatc gtcctggtcg tggaaggcga ggtcgcaaac
     2101 atcactggac gcgacgccac ggtcccgcct attgagatca gcgtgcgagg tgccgaaggg
     2161 cagatgctgt atacctggac caacgatgcg ccgcgggcgg tcctgggccc gagcgagacc
     2221 gccagcttcc gcgcgcggct gaccgcgcct ccggaagggg cgaggcacgt gctcgtgcat
     2281 tttgcggcac gaggcgacgg cgccgccgcc gtgagccgca tccgttagca tcatggcttt
     2341 gtcgcgcgtt cgtatcctgt tcgacgaag
//
LOCUS       DATAIQ010000397         1750 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_21195, whole genome shotgun sequence.
ACCESSION   DATAIQ010000397 DATAIQ010000000
VERSION     DATAIQ010000397.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1750)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1750)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1750
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21195"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(75..1040)
                     /locus_tag="VHN20_06640"
     CDS             complement(75..1040)
                     /locus_tag="VHN20_06640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019906173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2725479.1"
                     /translation="MIELRGVTKSFSGVPRPAVDHLDLMVPSAETCVLIGPSGCGKTT
                     TLRMINRLIEPTSGSILVEGEDITKVDPVALRRRIGYVIQQIGLFPHMTIFDNVATVP
                     RLFGWPKARVAQRVEEMLALVGLEPALFARRHPRHLSGGQRQRVGVARALAADPPVML
                     MDEPFGAVDPVIRGRLQDEFLGILRRLGKTVIFVTHDIDEAIRMGDRIAVLKDGRLAQ
                     YDTPDRLLAQPKDAFVADFVGNDRALKRLALVTAGSIANPNKVAPGAPSVSASASLRD
                     ALATLLLAGADTATVIGDNGAAVGTVTLAAIRERARPEPEGTAPT"
     gene            complement(1037..1684)
                     /locus_tag="VHN20_06645"
     CDS             complement(1037..1684)
                     /locus_tag="VHN20_06645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008123163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX2725480.1"
                     /translation="MLGDLLMWIQTHPKIIVTTGQQHLMLSGVALAAATGIGTPLGLL
                     LSRRPELASLTIGTANVLRTIPSLALLVIMLPLLGTGFMPSVVALTLYGLPAVLINTY
                     TGVGAVDRDVVEAARGQGLSDGQLMRRIEIPLALPVIFAGIRTAAVQIVSAATLAAFI
                     GGGGLGELITAGMGLLDIPQLLVGALAVAALAILTEAFFGLLEFALTRSRHAGSP"
BASE COUNT          287 a          587 c          624 g          252 t
ORIGIN      
        1 ctttctcggc gaagcggtat ccacttcgcc ggatcatgct cgagggcctg agttaacagg
       61 cggctcaata tccctcacgt cggcgcggtc ccttcgggct cgggccgggc gcgttcgcgg
      121 atcgccgcga gcgtgacggt cccgaccgcg gcgccgttgt cgccgatcac ggtcgcggtg
      181 tccgcccccg cgaggagcag cgtcgcgagc gcatcgcgca gtgacgccga agcggatacc
      241 gatggcgcgc cgggggccac tttgttcggg ttcgcgatgc tgcctgcggt gacgagcgca
      301 aggcgtttca aggcccggtc gttgccgacg aaatcggcga cgaaagcgtc cttcggctgg
      361 gccaggagac ggtcgggcgt atcgtattgc gcgagccggc cgtccttgag cacggcgatg
      421 cggtcgccca tgcggatcgc ctcgtcgatg tcgtgcgtga cgaagatcac ggttttcccg
      481 agccgccgca ggatgccgag gaattcgtcc tgcaggcggc ccctgatgac gggatcgacg
      541 gcgccgaagg gctcgtccat cagcatcacc ggcggatcgg cggcgagcgc gcgcgccacg
      601 ccgacgcgct ggcgctgccc gccggagagg tggcgcgggt ggcgacgcgc gaacagcgcc
      661 ggctcgagcc cgacgagcgc gagcatttcc tcgacacgtt gcgcgacgcg cgctttcggc
      721 cacccgaata ggcgcggcac cgtcgccacg ttgtcgaaga tcgtcatgtg cggaaacagg
      781 ccgatctgct ggatcacgta gccgatgcgc cggcgcaagg cgaccggatc gaccttggtg
      841 atgtcctcgc cttcgacgag gatcgagccg gacgtcggct cgatcagccg gttgatcatg
      901 cgcagcgtcg tcgtcttgcc gcagccggac ggaccgatca gcacgcaggt ctcggccgac
      961 ggcaccatca ggtcgagatg atcgacggcc gggcgcggca cgcccgaaaa actcttggtg
     1021 acgccgcgca gctcgatcat ggcgaccccg cgtggcgcga gcgcgtcaac gcgaactcga
     1081 gcaagccgaa aaaggcctcg gtcagaatgg cgagcgccgc caccgccagc gcgccgacaa
     1141 gcagttgcgg aatgtcgagc aggcccatgc cggcggtgat cagctcgcca aggccgccgc
     1201 cgccgatgaa ggcggcgagc gtcgccgccg agacgatctg caccgccgcc gtgcggatgc
     1261 cggcgaagat caccggcaag gcgagcggaa tctcgatgcg ccgcatcagc tgtccgtccg
     1321 acaggccttg cccgcgtgcg gcctcgacca cgtcgcggtc caccgcgccc acgcccgtgt
     1381 aggtgttgat gagcaccgcc ggcaggccgt agagcgtgag cgccacgacg gagggcatga
     1441 agcccgtgcc gaggagcggc agcatgatca cgagaagcgc aaggctcggg atcgtgcgca
     1501 ggacgttggc cgtgccgatg gtgagactcg cgagctcggg ccggcggctc agaagcaatc
     1561 ccaacggcgt cccgattccg gtcgcggccg caagggcgac gcccgagagc atgaggtgct
     1621 gttgccccgt cgtcacgatg atcttcggat gggtctggat ccacatcagg aggtcgccga
     1681 gcatcggtca gtccgcgtgt gcggcgcgca ggcgacgctc gaacagccgc aggccctcgt
     1741 ccgtcgccac
//
LOCUS       DATAIQ010000398         1882 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_55669, whole genome shotgun sequence.
ACCESSION   DATAIQ010000398 DATAIQ010000000
VERSION     DATAIQ010000398.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1882)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1882)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1882
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_55669"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1136)
                     /gene="metG"
                     /locus_tag="VHN20_06650"
     CDS             complement(<1..1136)
                     /gene="metG"
                     /locus_tag="VHN20_06650"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004825 - methionine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HEX2725481.1"
                     /translation="MGEPFYITTAISYPNGRPHIGHAYEAIAADVIARFRRAQGRDVR
                     LVTGTDEHGLKMVQTARAEGRDTLEYADETSLYFRQMCDYLNISYDEFVRTTEPRHEA
                     ASIALWKALEANGDLYLDRYEGWYSVRDEAFYDESELSGEGDERRSPQGTPVEWTQEE
                     TWFFRLSAYQERLLAHYRDNPSFILPESRRNEVVRFVEGGLKDLSVSRTSFDWGVKVP
                     GAPGHVMYVWVDALTTYMTGAGYPDTDSELYRRYWPADVHLIGKDIVRFHTVYWPAFL
                     MSAGLPLPKQVFGHGFVLARGGEKMSKSVGNVVDPMDLAASFGVDPLRYFLMREISFG
                     QDGSYSADAIVTRCNAELANSFGNLAQRVMSMIFKNVEGVLPPPG"
     gene            complement(1149..>1882)
                     /locus_tag="VHN20_06655"
     CDS             complement(1149..>1882)
                     /locus_tag="VHN20_06655"
                     /inference="COORDINATES: protein motif:HMM:NF024575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725482.1"
                     /translation="FRLLEREMNKTGSALARNITVAQVRSLGELFGQTPALGNWRAVV
                     IDSVDDLEKGAANALLKMLEEPPPNCLFLLVSHVPGRLLPTVRSRCRRLEFPPLGDDV
                     MASLLTEYAPGASAESLAAAAGGSIGRALALARLDLAPLRDQALGLMREGDPTNARRS
                     KLASALGARGAGERYAAFLDLVPSLIAAEARRLDGPARNRALDAYATARDEARLAPRL
                     SLDPAATAFRLGSILASIAPAGAAR"
BASE COUNT          315 a          605 c          655 g          307 t
ORIGIN      
        1 cccggcggcg gaaggacgcc ctccacgttc ttgaagatca tcgacattac gcgctgtgcg
       61 aggttgccga agctgttggc gagctcggcg ttgcagcggg tgacgatcgc atcggcgctg
      121 tagctcccgt cctggccgaa actgatttcg cgcatcagga aatagcgcaa cggatcgacc
      181 ccgaaggagg cggcgaggtc catcgggtcg accacgttgc cgacgctctt cgacatcttt
      241 tcgccgcctc tggccaggac gaagccgtgc ccgaacacct gtttgggcag cggcaggccc
      301 gcgctcatca ggaacgccgg ccagtagacg gtgtggaagc gaacgatgtc cttgccgatc
      361 aggtggacgt cggccggcca gtagcggcgg tatagctcgc tgtcggtgtc gggatagcca
      421 gcgccggtca tgtaggtggt cagcgcgtcg acccagacgt acatcacgtg accgggcgcg
      481 ccgggcacct tcacgcccca gtcgaagctg gtgcgcgaga cgctgagatc cttgaggccg
      541 ccctcgacga aacggacgac ctcgttgcgg cggctttcgg ggaggatgaa cgacggattg
      601 tcgcggtagt gcgccagcag gcgctcctgg taggccgaca ggcgaaagaa ccaggtttct
      661 tcctgggtcc attcgaccgg cgtgccctgc ggcgagcggc gctcgtcccc ttccccgctc
      721 agctcgctct cgtcgtaaaa ggcctcgtcg cggaccgaat accaaccctc gtagcggtcg
      781 aggtagaggt cgccattggc ctcgagcgcc ttccacaagg caatgctggc cgcttcgtgg
      841 cgcggctcgg tggttcttac aaattcatcg tagctgatgt tcaaatagtc gcacatctgc
      901 ctgaaatata gggacgtttc gtcggcatat tcgagcgtat cccgcccttc cgcgcgggcc
      961 gtctggacca ttttcagccc atgctcgtcg gtaccggtga ccagccgcac gtcgcgcccc
     1021 tgggcgcggc gaaagcgggc gatgacatcg gcggcgatcg cctcgtaggc gtgaccgatg
     1081 tgcgggcgcc cgttgggata ggagattgcg gtggtgatgt agaacggctc gcccatggca
     1141 gcgccgccct agcgagcggc gcccgccggg gcaatggaag ccaggatcga gcccagccgg
     1201 aaggcggtcg ccgccgggtc gagcgaaagg cgcggtgcga gccgggcctc gtcgcgggca
     1261 gtggcatagg catcgagcgc acgattccgc gccgggccgt cgaggcggcg agcctcggcg
     1321 gcgatcagcg acgggacgag gtcgaggaac gcggcatagc gctcgcccgc gccgcgcgcg
     1381 ccgagagccg acgcgagctt cgagcggcgg gcattggtcg gatcgccctc ccgcatgagt
     1441 ccgagcgcct ggtcccgcag cggggcgagg tcgagcctcg ccagcgcgag cgctcggccg
     1501 atcgagccgc ctgctgctgc ggcaagcgat tcagccgacg cgcccggcgc atattcggtc
     1561 agcagcgacg ccatgacgtc atcgccaagc ggcgggaatt ccagccttct gcagcgcgac
     1621 cggacggtcg gcagaagccg gccgggaaca tggctgacga gcaggaacag gcagttcggc
     1681 ggcggctcct cgagcatttt gagaagggca ttggcggcgc ccttctcgag gtcgtcgacg
     1741 ctgtcgatga ccaccgcccg ccagttgccc agcgccggcg tctgtccgaa cagctcgcca
     1801 agcgaacgca cctgggcgac ggtaatgttg cgggcaagcg cgctgccggt cttgttcatt
     1861 tcacgctcga gaagcctgaa gt
//
LOCUS       DATAIQ010000399         1605 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_21270, whole genome shotgun sequence.
ACCESSION   DATAIQ010000399 DATAIQ010000000
VERSION     DATAIQ010000399.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1605)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1605)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1605
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21270"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..183
                     /locus_tag="VHN20_06660"
     CDS             <1..183
                     /locus_tag="VHN20_06660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013635404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HEX2725483.1"
                     /translation="FASLNGPAHYGLSPNQETITLEKSPWTAPEEIKVDGPEERALVY
                     RGGETIQWRVRPHGPN"
     gene            209..1516
                     /locus_tag="VHN20_06665"
     CDS             209..1516
                     /locus_tag="VHN20_06665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018963987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HEX2725484.1"
                     /translation="MLLNEFSATEAARLIREGKITSVELVRACLDRIEAREPTVKAWA
                     TIDPELALRQAQERDRGPSRGPLHGVPVAVKDVLDTADLPTEMGSPIYTGHRPAADAA
                     CVAAVRAAGAVILGKTVTCEFAFMAPGPTANPHDPRHTPGGSSSGSAAAVADFMVPLA
                     FGTQTGGSVQRPASYCGTVGYKPTFGLFNRQGLKFASESLDTIGLMARSVEDVALGRD
                     VLTGASQPADLMARAPCRVGLCRTYLWDKASAETKEAVESAAARLAAAGVQVEEVSLP
                     EEFGGLTQARDIINNVERVHGMAHEWHLHRDQLSVQLSRCIALGLETPQRDYVDALRL
                     AESCRIKLDPIMDGFDLLVAPSATGEAPLGLEWTGDSTFQGLWTLLHVPTVSLPVHAG
                     PNGLPVGVQLIGARFRDEKLLQAASWIFATLGTPRQAAPALVA"
BASE COUNT          243 a          542 c          570 g          250 t
ORIGIN      
        1 ttcgcctcgc tcaacggtcc ggcgcattac ggtctgtcgc cgaaccagga aaccatcacg
       61 ctcgagaagt cgccgtggac tgctccggag gagatcaagg tcgacggccc cgaggagcgg
      121 gcgctggtgt atcgcggcgg cgaaaccatc cagtggcgcg tgcgcccgca cggcccgaac
      181 tgagacgtct tacgcggagg gtctggcgat gctgctcaac gaattctcgg cgaccgaggc
      241 ggcccgactc attcgcgagg gaaagatcac gtcggtcgag ctggttcgcg cctgtctcga
      301 tcgcatcgag gcacgcgagc cgacggtcaa ggcctgggcg acgatcgatc cggagcttgc
      361 gttgcgccag gcgcaggagc gcgaccgcgg ccccagtcgc ggcccgctgc acggcgttcc
      421 ggtggccgtg aaggacgtgc tcgacaccgc cgatctgccg accgagatgg gttcgccgat
      481 ctacacgggg catcggccgg cggcagacgc ggcctgcgtc gcggcggtgc gcgccgccgg
      541 cgccgtcatc ctcggcaaga ccgtcacctg cgagtttgcg ttcatggcgc cggggccgac
      601 cgccaacccg cacgatccgc ggcacacgcc gggcggctcg tcgagcggct cggctgccgc
      661 cgtcgccgac ttcatggtgc cgctcgcctt cggcacgcag accggcggct cggtgcagcg
      721 ccccgcctcg tattgcggca cggtcggcta caagccgacc ttcgggctgt tcaacaggca
      781 aggcctcaaa ttcgcgtcgg aaagcctcga caccatcggg ctgatggcgc gttcggtcga
      841 ggacgtggcg ctgggccgcg acgtgctgac cggcgcgtcg cagccggccg atctcatggc
      901 gcgcgcgccg tgccgcgtcg gtctgtgccg gacgtatctg tgggacaagg cctcggccga
      961 gacgaaagag gcggtggaga gcgcggcagc gcgcctggcc gccgccggcg tccaggtcga
     1021 ggaggtctcg ctgccggagg aattcggcgg gctcacgcag gcccgcgaca tcatcaacaa
     1081 tgtcgagcgc gtgcatggca tggcgcacga atggcatctc catcgcgatc agctgagcgt
     1141 gcagctcagc cgctgcatcg cgctcggcct cgagacgccg cagcgcgact atgtcgacgc
     1201 gctgcgcctg gctgaaagct gccgcatcaa gcttgacccg atcatggacg ggttcgacct
     1261 gctcgtcgcg ccgagcgcca cgggtgaggc gccgctcggg ctggagtgga cgggcgattc
     1321 gaccttccaa ggtttgtgga cgctgctgca cgtgccgacc gtgagcctgc ccgtccatgc
     1381 cgggccgaat ggcctgccgg tcggcgtgca actgatcggg gcgcgcttcc gcgacgaaaa
     1441 gcttctgcag gcggcgtcat ggatctttgc gacgttgggc acgccgcgcc aggcggcgcc
     1501 ggcgctcgtc gcatgatgac gttgcggcgc gcacgttcct gctgttagga ggatcgaatg
     1561 caaatctcca atgcattcga tgtgcccctg ccgccgcagc aggcg
//
LOCUS       DATAIQ010000400         2090 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_390307, whole genome shotgun sequence.
ACCESSION   DATAIQ010000400 DATAIQ010000000
VERSION     DATAIQ010000400.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2090)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2090)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2090
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_390307"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..781)
                     /locus_tag="VHN20_06670"
     CDS             complement(<1..781)
                     /locus_tag="VHN20_06670"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018263962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-transferase"
                     /protein_id="HEX2725485.1"
                     /translation="MALKSKIVSPAEAVAILRSGDTVCVSGFVGIGTPDELLIALERR
                     FLDGGEPRDLTLVFAAAPGDAKERGLNRLAHKGLLKRVVGGHWALVPKIAELALDGAI
                     EAYNLPLGCVSHLYREIAARRPGALCKVGLRTFVDPRLGGGKLNSVTTEDLVELVQLR
                     GEDWLLYKSFPINVALLRGTTADPNGNITMEREALTLDNLAAAMAAKNSRGFVIAQVE
                     RIAAADSLSPREVQIPGILVDCVVVARPENHLQTYATSYNHA"
     gene            complement(781..1938)
                     /gene="phaC"
                     /locus_tag="VHN20_06675"
     CDS             complement(781..1938)
                     /gene="phaC"
                     /locus_tag="VHN20_06675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007597434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class III poly(R)-hydroxyalkanoic acid synthase
                     subunit PhaC"
                     /protein_id="HEX2725486.1"
                     /translation="MSDLKIPLQVRPDQAAAETLALAEKVARGAKLFSEVRDDDVAIA
                     TTPKDEIWRQDKVVLYRYRPLAEQKVSTPVLITYGLIGRYTMADLQEDRSLVRNLLKL
                     GVDLYVVDWGNPSRADRWLTIDDYVDDYVAGAVEAIQERAGVDKVNLLGICEGGVFAL
                     CYAALYPDTVKNLVLTITPVDFHGDQVENRVGHGFINLWTRSLEPEDIDRLIEAHGNL
                     PGEFMGSVFSLMTPMRTLMKYNFDMLEVMDDQKKFLNFLRMEKWIADRPHHPGEAAKQ
                     WLKDLYQDNKLVRGEFELGGRKVDLRNITMPVLNVFAKDDHIIPPATSQALRICVGSR
                     DYDELPLPGGHVGVFVGGKSQGLLGSGIASWLGDRDGEPDDGAGPPRKRPR"
     gene            complement(1941..>2090)
                     /locus_tag="VHN20_06680"
     CDS             complement(1941..>2090)
                     /locus_tag="VHN20_06680"
                     /inference="COORDINATES: protein motif:HMM:NF021246.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="poly(R)-hydroxyalkanoic acid synthase subunit
                     PhaE"
                     /protein_id="HEX2725487.1"
                     /translation="ESYGEMFGHPTRAELDDVHKTVTELRRELRALKRQMRSAAPRGQ
                     QPIGA"
BASE COUNT          318 a          673 c          739 g          360 t
ORIGIN      
        1 aggcgtgatt gtacgaggtg gcgtaggtct ggaggtggtt ctcgggccgg gccacgacga
       61 cgcaatcgac gaggatgccg gggatctgca cctcgcgcgg gctcagcgag tcggcggcgg
      121 cgatgcgctc gacctgcgcg atgacgaagc cgcgcgagtt cttggccgcc atggcggcgg
      181 cgaggttgtc gagcgtgagc gcctcgcgct ccatggtgat gttgccgttg ggatcggccg
      241 tcgtgccgcg cagcagcgcc acgttgatcg ggaacgactt gtagaggagc cagtcctcgc
      301 cgcgcagctg caccagctcg acgagatcct cggtcgtgac gctgttgagc ttgccgccgc
      361 cgagacgcgg gtcgacgaag gtgcgcaggc cgaccttgca cagagcgccg ggccggcgcg
      421 cggcgatctc gcggtagaga tgggagacgc agccgagggg gaggttgtag gcctcgatgg
      481 cgccgtcgag ggcgagctcg gcgatcttcg gcaccagggc ccaatggccg ccgacgacgc
      541 gcttcagcag gcccttgtgg gcgaggcggt tgaggccgcg ctccttggcg tcgccgggcg
      601 ccgccgcgaa gaccagcgtc aggtcgcgcg gctcgccgcc gtcgaggaaa cggcgctcga
      661 gggcgatgag cagctcgtcg ggcgtgccga tgccgacgaa gcccgacacg cacaccgtgt
      721 cgccgctgcg caggatggcg acggcctcgg cgggcgagac gatcttgctc ttgagcgcca
      781 tcagcgtggg cgtttgcgcg gcggcccggc gccgtcgtcc ggctcgccgt cgcggtcgcc
      841 cagccagctg gcgatgccgg agccgagcag accctgcgac ttgccgccga cgaagacgcc
      901 gacatggccg cccggcagcg gcagctcgtc gtaatcgcgc gatccgacgc agatgcgcaa
      961 ggcctgcgag gtcgccggcg ggatgatgtg gtcatccttg gcgaacacgt tcagcaccgg
     1021 catggtgatg ttgcgcaggt cgaccttgcg cccgcccagc tcgaactcgc cgcgcacgag
     1081 cttgttgtcc tggtagaggt ccttgagcca ctgcttggcc gcctcgcccg gatggtgcgg
     1141 ccggtcggcg atccatttct ccatgcgtaa aaaattcagg aacttcttct ggtcgtccat
     1201 cacctcgagc atgtcgaaat tgtatttcat gagcgtgcgc atcggcgtca tcagcgagaa
     1261 gaccgagccc atgaactcgc cgggcaggtt gccgtgcgct tcgatcagcc ggtcgatgtc
     1321 ctcgggctcg aggctgcgcg tccacagatt gatgaagccg tggccgaccc ggttctcgac
     1381 ctggtcgccg tggaagtcga cgggcgtgat cgtgagcacg aggttcttga cggtgtccgg
     1441 ataaagcgcc gcgtagcaga gcgcgaacac gccgccctcg cagatgccga ggaggttgac
     1501 cttgtcgacg ccggcacgct cctggatcgc ctcgaccgcg ccggcgacgt agtcgtcgac
     1561 gtaatcgtcg attgtgagcc agcggtcggc gcgggacggg ttgccccaat cgacaacgta
     1621 gaggtcgacc ccgagcttga gcaggttgcg cacgagcgag cggtcttcct gcaggtcggc
     1681 catggtatag cggccgatca gcccgtaggt gatgagaacc ggcgtgctga ccttctgctc
     1741 ggcgagcggc ctatagcggt agagcaccac cttgtcctgc cgccagatct cgtctttcgg
     1801 cgtggttgca atggccacgt cgtcgtcgcg tacctcgctg aacagcttgg cgccgcgcgc
     1861 caccttctcg gccagagcga gggtctccgc cgccgcctga tcgggcctga cctgcagggg
     1921 aatcttgaga tcgctcatgg ctaagctccg atcggctgct gcccacgcgg tgcggcagag
     1981 cgcatctgcc gtttcagcgc cctcagctcg cgacgcagct ccgtcacggt cttgtgcacg
     2041 tcgtcgagct ccgcccgtgt cggatggccg aacatctcgc cgtaggattc
//
LOCUS       DATAIQ010000401         2235 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_194236, whole genome shotgun sequence.
ACCESSION   DATAIQ010000401 DATAIQ010000000
VERSION     DATAIQ010000401.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2235)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2235)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2235
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_194236"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..421)
                     /locus_tag="VHN20_06685"
     CDS             complement(<1..421)
                     /locus_tag="VHN20_06685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018260822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725488.1"
                     /translation="MSRVDEVLNDIDADLDNSLERLFSWLKIPSVSTDPAYAGDCRQA
                     AGWLSEHLQALGFDASVRATPGHPVVVAHRPGKPGVPHVLFYGHYDVQPVDPLDQWQT
                     PPFEPRLATLPDGRKVIPLDQSDPKRSALNAASQPRSR"
     gene            complement(424..1932)
                     /locus_tag="VHN20_06690"
     CDS             complement(424..1932)
                     /locus_tag="VHN20_06690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019906045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase HerA-like domain-containing protein"
                     /protein_id="HEX2725489.1"
                     /translation="MSEDGRILIGKSTKPQYLTLGLANRHGLVTGATGTGKTVTLQVL
                     AEGFSNAGVPVFAADIKGDLSGVAARGENKAPFVNRAKEIGIDYTPDRFPVVFWDLFG
                     EQGHPIRTTVSEMGPLLLARLLELNDVQEGILNIAFRVADDNSLPVLDLKDLRALLAY
                     CVENEKEIDSTYGNVGKDSIGAIQRRLLMLENQGADKFFGEPALDIGDFIKTDRDGRG
                     IINLFAADKLMANPRLYASFLLWMLSELFEELPEVGDLDKPKLVFFFDEAHLLFNDAP
                     RPLLEAVEQVVRLIRSKGVGVYFVTQNPLDVPETVLAQLGNRVQHALRAFTPRDQKAV
                     KAAAATFRQNPSFSSEKAITELGVGEALVSTLEGNGTPSVVERTLIAPPGARVGPLAD
                     AERKDVIKASPVRGKYDDTLDSESAYEMLAKRKEMAKEPAQQASGAGGLGGLLESVLG
                     GAQTSGKGKGRQRMTMTEVVVRSAATSVARTVGTQIGRAILRGVLGSITKGR"
     gene            2071..>2235
                     /locus_tag="VHN20_06695"
     CDS             2071..>2235
                     /locus_tag="VHN20_06695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006165185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2267 domain-containing protein"
                     /protein_id="HEX2725490.1"
                     /translation="MDELIARITKSTGLDATTAQKAIGIILAFLKKEGPPAEVNQLLA
                     AMPGAEQVVAQ"
BASE COUNT          384 a          722 c          745 g          384 t
ORIGIN      
        1 cgcggcttcg cggctgcgaa gccgcgttca acgccgatcg cttcggatcg gattgatcca
       61 gggggatgac cttgcgccca tccggcagcg tcgcgagccg cggctcgaag ggcggcgtct
      121 gccactggtc gagcgggtcg accggctgca cgtcgtaatg accgtagaaa agcacatgcg
      181 ggacgccagg ctttcccggc cgatgcgcaa ccacgaccgg atggcccggg gtggcgcgca
      241 ccgacgcgtc gaagccgagc gcctgaagat gctcgctgag ccagcccgcc gcctggcggc
      301 aatcacccgc ataggccggg tcggtcgaga ccgacgggat cttcagccag gaaaacaggc
      361 gttcgagcga gttgtcgaga tcggcgtcaa tatcgttgag gacttcatcg acacgggaca
      421 tggctaacgg cctttggtga tgctgccgag aacaccgcgc aggatggcgc ggccgatctg
      481 cgtgccgacg gtacgggcga cggaggtcgc ggccgagcgg acgacgacct ccgtcatggt
      541 catgcgctgg cggcccttgc ctttgccgct tgtctgagcg ccgccgagaa cggattccag
      601 caacccgccg aggcctcccg cgcccgacgc ctgctgcgcc ggctccttgg ccatctcctt
      661 gcgcttggcg agcatctcgt aggcgctctc cgagtcgagc gtgtcgtcgt atttgcccct
      721 gaccgggctc gccttgatga cgtccttgcg ctccgcgtcg gcgagcgggc cgacgcgcgc
      781 gcccggcggc gcgatcaggg tgcgttcgac gactgacgga gtgccattgc cctccagcgt
      841 cgagacgagc gcctcgccga cgccgagctc ggtgatcgcc ttctcgctcg agaaggacgg
      901 gttctggcgg aacgtcgcgg cagccgcctt gacggccttc tggtcgcgcg gcgtgaaggc
      961 gcgcaatgcg tgctgcaccc ggttgccgag ctgcgcgagc acggtctcgg ggacgtcaag
     1021 cgggttctgc gtgacgaaat aaacgccgac gcctttcgag cggatcagcc gcacgacctg
     1081 ctccacggct tcgagcaagg ggcgcggcgc atcgttgaac aaaaggtgcg cctcgtcgaa
     1141 aaagaacacg agcttcggct tgtcgagatc gccgacttcg ggcagctcct cgaacagctc
     1201 ggacagcatc cacaacagga acgaggcgta gaggcgcgga ttggccatca gcttgtcggc
     1261 cgcgaacagg ttgatgatgc cgcggccatc gcgatcggtc ttgatgaagt cgccgatgtc
     1321 gagcgcaggc tccccgaaga acttgtcggc gccctggttc tcgagcatca gcaggcggcg
     1381 ctggatggcg ccgatcgaat ccttgccgac attgccgtat gtcgagtcga tctccttctc
     1441 gttctcgaca caataggcga gcagcgcgcg cagatccttg aggtcgagca cgggcaggga
     1501 attgtcgtcg gcgacgcgga atgcgatgtt gagaatgccc tcctgaacgt cattgagctc
     1561 cagcagccgc gccaaaagca gcggccccat ctccgagacg gtggtgcgaa tcggatgccc
     1621 ctgctcgccg aacaggtccc agaacacgac cggaaaacgg tcgggcgtgt agtcgatgcc
     1681 gatctccttg gcgcggttca caaaaggggc cttgttttcg ccgcgcgcgg cgacaccgga
     1741 cagatcgccc ttgatgtcgg cggcgaacac cggcacgccg gcattggaga agccttcggc
     1801 aagaacctgc aaggtcaccg tcttgccggt gccggtcgcc cccgtgacga ggccgtggcg
     1861 gttggcgagg ccgagcgtga ggtattgcgg cttggtgctc ttgccgatca ggatcctgcc
     1921 atcctcgctc atggtcgctc ccttggtgag cgctgagtca taggcaatcg tgtcggccct
     1981 ttccatcccg ttcgtcgccg cggcgccggg cggctccttg atttcgcccg cgcaatttcg
     2041 gaaatgatgc agccgcatca ggagacggac atggacgagc ttatcgcgcg catcaccaaa
     2101 tccacgggtc ttgacgcgac caccgcccag aaggcgatcg gcatcatctt ggcctttctc
     2161 aagaaggaag gcccgccggc cgaggtgaac cagctcctcg ccgccatgcc gggtgccgag
     2221 caggtggtcg cacaa
//
LOCUS       DATAIQ010000402         3041 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_240632, whole genome shotgun sequence.
ACCESSION   DATAIQ010000402 DATAIQ010000000
VERSION     DATAIQ010000402.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3041)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3041)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3041
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_240632"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..391
                     /locus_tag="VHN20_06700"
     CDS             <1..391
                     /locus_tag="VHN20_06700"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HEX2725491.1"
                     /translation="TATSSTLSLIFRPDASSAHTDLSKIMRERLIVAPRGNTMRNVIQ
                     RSLALLPARPSSYLECPTCQTAAALVAGGMGPAIIHSICLQHMSGLNLSSIDLGPRFG
                     TVPLVVMSRRQAMRGPLLKRLVNELVA"
     gene            604..1815
                     /locus_tag="VHN20_06705"
     CDS             604..1815
                     /locus_tag="VHN20_06705"
                     /inference="COORDINATES: protein motif:HMM:NF039236.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic ring-hydroxylating dioxygenase subunit
                     alpha"
                     /protein_id="HEX2725492.1"
                     /translation="MRHEENEMLTRVGRGTPAGELLRRYWHPVSIAGELTEQKPTKRV
                     TLLGEKLVVFRMPLREGETQPRYGLVAEQCRHRLASLYYGKVERDGIRCPYHGWKYDL
                     GGNCLETPPEPPEWAYKKEIRQPAYPVQKLAGLLWAYLGPEPAPELPRWDVLAREDGK
                     RWVTIESVIDCNWLQPMENSVDPSHLYWLHGYTYGSGHLVDPQQRERAEAQYREQHEF
                     IAFEYGIMKRRITPGKNAGEPDRIDEHPLVFPTALRHVSNEVRGKREPVYRHNLQIRV
                     PIDDTHTQVYRVNFVPNSTDRSPPDIDPPYEYRPLKDENGEYCWDVVSAQDSMAWETQ
                     GPITDRTQEHLGFADRGIVMFRKLLRQQIEIVQKGGDPLGVIRDPEKAKYVELPVINE
                     RIGLFRPQAAE"
     gene            1866..2588
                     /locus_tag="VHN20_06710"
     CDS             1866..2588
                     /locus_tag="VHN20_06710"
                     /inference="COORDINATES: protein motif:HMM:NF012804.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HEX2725493.1"
                     /translation="MEELRARIAKACRVLGKLQLTKSASGHISARVPGTDTILIRARG
                     PGESGVRFTAEDDVIEVGLDGKKRAGRDDLEPPHEVYIHTWLYRTRPDVSAVLHAHPP
                     TVVLFTICNKPLMPIYGAYDPGSVRLLLEGIPTYPRSITVSNDELGQEFAATMRGCAC
                     LMRGHGITTCGATVEEATLTAIRLNELAEMNYRAQLLGDPQPISDEDIAHFRKGKNKG
                     ADRDGHAGPMWRYYCRLVGEEE"
     gene            2585..>3041
                     /locus_tag="VHN20_06715"
     CDS             2585..>3041
                     /locus_tag="VHN20_06715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725494.1"
                     /translation="MIKGQTVEIGGKTPYERWIDSQRIPLVKDFYIEDLRTLEVAPWE
                     WKGARGAYLNLIGTGNANDAYVLEIEPGKKVRPQRVLFEEMYFVVEGSGATAVWNDEN
                     RKINFEWQAGSLFSPPVNTWRQHFNTSGSKPARLFAVTSAPVLINLFRNL"
BASE COUNT          595 a          997 c          962 g          487 t
ORIGIN      
        1 aacggcaacg tcgtcgacct tgtccctcat cttccgccct gacgcgagca gcgcccacac
       61 cgatctctcc aagatcatgc gcgagcgtct catcgtggcg ccgcgcggca acaccatgcg
      121 caatgtgatc cagcgctcgc tggcgctgtt gccggcgcgc ccgagctctt acctcgaatg
      181 cccgacctgc cagacggcgg ccgccttggt ggcgggcgga atggggcctg cgatcattca
      241 ttcgatttgc ctgcagcaca tgtcgggcct gaacctcagc tcgatcgacc tgggccctcg
      301 cttcgggacg gtgccgctgg tcgtgatgtc gcggcgtcaa gcaatgcgcg gcccgcttct
      361 gaaacgcctt gtcaatgagc tggtggccta gaaagcaagg ttgcccactc agaaggccgg
      421 cgggctcacc atgtcccggc cagcttcagc tattttgaag ctgtcttcaa aaaaaagaaa
      481 tttcgcctaa gctcggaagg gcctagattt gcggcatggt gagcaggaac ggggcaaaag
      541 accccgactt cgggccggca cgaccggccc cagctgcaga accagcaccg ggaggagccg
      601 gccatgaggc acgaagagaa tgagatgctg acccgggtcg ggcgcggcac tccggccggc
      661 gaattgctgc gccgctactg gcaccccgtg tcgatcgccg gcgagctcac cgagcagaaa
      721 ccgaccaagc gcgtcacgct gctcggagaa aagctcgtag tgttccgcat gccgctgcgc
      781 gagggcgaga cgcagccgcg ctatggtctc gtcgctgaac aatgcaggca ccggctcgcc
      841 tcgctgtatt acggcaaagt cgagcgcgac ggcatccggt gtccgtatca cggctggaaa
      901 tacgacctcg gaggcaactg cctcgagacg ccgcccgagc ccccggaatg ggcctacaag
      961 aaggagatcc gccagcccgc ctacccggtg cagaagctgg ctggcctgct gtgggcctat
     1021 ctcggccccg agccggcccc cgagctgccg cgctgggacg tgctcgcccg cgaggacggc
     1081 aagcgctggg tcacgatcga gtcggtgatc gactgcaact ggctgcagcc gatggagaac
     1141 tcggtcgacc cttcgcatct ctactggctg cacggctaca cttacggctc gggccatctc
     1201 gtcgatccgc agcagcgcga gcgcgccgag gcgcagtatc gcgagcagca cgagttcatc
     1261 gcgttcgaat acggaatcat gaagcggcgc atcacgccag gtaagaatgc cggcgaaccg
     1321 gaccgtattg acgagcaccc gctggtgttt ccgacggctt tgcgtcacgt ctccaacgag
     1381 gtgcgcggca aacgcgagcc ggtctaccgc cataatctgc agatccgcgt gccgatcgac
     1441 gacacgcaca cgcaggtcta ccgcgtcaac ttcgtcccga acagcaccga ccgctcgccg
     1501 cctgacatcg atccgcctta cgaataccgc ccgctcaagg acgagaacgg cgagtattgc
     1561 tgggacgtcg tgtcggcgca ggactcgatg gcctgggaga cgcaaggccc gatcaccgat
     1621 cgcacccagg aacatctcgg ctttgccgac cgcggcatcg tcatgttccg caagcttctg
     1681 cgccagcaga tcgagatcgt gcagaaaggc ggcgatccgc tcggcgtcat ccgcgatccc
     1741 gaaaaggcga aatatgtcga gctgccggtc atcaacgagc gcatcgggct gttccgccct
     1801 caggcggcgg aatgatcggg atgacgcgcc ccatgtgctc gcgaaacaac ggcaggtaag
     1861 cgtccgtgga agagcttcgc gcgcgcatcg ccaaggcctg ccgggtgctc ggcaagttgc
     1921 agctgacgaa gagcgcgagc ggccacatca gcgcgcgcgt tccgggcacc gacacgatcc
     1981 tgatccgcgc gcgtggcccg ggcgagtcgg gtgtgcgctt cacggccgag gacgacgtga
     2041 tcgaggtcgg tctcgacggc aagaaacgtg ctggccgcga tgatctcgag ccgccccacg
     2101 aggtgtatat ccacacctgg ctttatcgca cccggcccga cgtcagcgcc gtcctgcacg
     2161 cgcacccgcc gaccgtggtg ctgttcacga tctgcaacaa gccgctcatg ccgatctacg
     2221 gcgcctacga tcccggcagc gtgcgcctgc tgctcgaggg catcccgacc tatccacgca
     2281 gcatcaccgt ctcgaacgat gaactcggcc aggaattcgc cgccacgatg cgtggctgcg
     2341 cctgtctgat gcgcggccac ggcatcacga cgtgcggcgc caccgtcgaa gaggcgacgc
     2401 tcacggcgat ccgtctcaat gagctggccg agatgaatta ccgcgcgcag ctgctcggcg
     2461 acccgcagcc gatttcggac gaggacatcg cgcatttcag gaagggcaag aacaaagggg
     2521 ccgaccggga cggccatgcc ggaccgatgt ggcgctacta ctgcaggctt gtcggggagg
     2581 aagaatgatc aagggccaaa cggtcgagat cggcggcaag accccttacg agagatggat
     2641 cgactctcag cgcattccac tcgtcaagga tttttacatc gaggacctgc gcaccctcga
     2701 ggttgcgccg tgggagtgga aaggcgcgcg cggggcgtat ctgaacctga tcggcacggg
     2761 aaatgccaac gacgcctacg tgctcgaaat cgagcctggc aagaaggtca ggccgcagcg
     2821 cgtcctgttc gaggagatgt atttcgtcgt cgaagggagc ggcgcgaccg cggtctggaa
     2881 cgacgagaac aggaagatca acttcgagtg gcaggccggc agcctgttct cgccgccggt
     2941 gaacacatgg cgccagcact tcaacacgag cggctcgaaa ccagcccgcc tgttcgccgt
     3001 gacctcggcg ccggtgctga tcaacctgtt ccgcaatctc g
//
LOCUS       DATAIQ010000403         3989 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_148574, whole genome shotgun sequence.
ACCESSION   DATAIQ010000403 DATAIQ010000000
VERSION     DATAIQ010000403.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3989)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3989)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3989
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_148574"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1145
                     /locus_tag="VHN20_06720"
     CDS             <1..1145
                     /locus_tag="VHN20_06720"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX2725495.1"
                     /translation="LRTALVITGPLVAPAILSGTLLAFVNAIALFGSQAIIGLPGRIV
                     TLPTRIYSLFDYPPEYGLASALSLLFVLITVVALYLQRAFLARRSFVTLAGKGSRPQL
                     VDLGTGRWVLFGFCVLIFIVAIVAPYSALLAVSFSKSWGLEFWKNLTLANYKFVLVDY
                     DVTRRAIGNSLLLATIAATIAVLLGSIISWIDLRTRLPGRKLLDYAALVPLGLPGIVM
                     AVALIQFWLMMPIALYGTLAILLLAYVGRYIPLGVRAANASLRQVDASLEESARILGA
                     KWGTTMREVTLPLIRPGLFAGWLLVFVPVIQELSASILLFSSSSITLAVAIYNLYETG
                     ATERVAALAMINMVIIAVAIWLANKFGGGGIGRGSNVENTRGGLGT"
     gene            1145..2263
                     /locus_tag="VHN20_06725"
     CDS             1145..2263
                     /locus_tag="VHN20_06725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013165354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2725496.1"
                     /translation="MAGITIRGLSKTYTGTDSDMAAVADLDLDIRDNEFVTLLGPSGC
                     GKTTTLRLIAGYLQPDSGTIHVNSRLLSASDHVVPPEERGMGMVFQNYAVWPHKTVFE
                     NVVFGLKLRKVPSAQARERVQKTLELVNLTGYEKRYPNELSGGQQQRVALARSLVVEP
                     DILLLDEPLSNLDAKLRERMRVELKQLQRRTGITFVYVTHDQAEALALSDHIAVIHNG
                     RLQQYGTPFDVYARPANRLVADFMGLVNLVPGTVAEVAQGRGTVVVGADLKLNVPVPE
                     GAARGEPIEIAIRPENIHLRRPNGTATALPLATVSDRTFLGNITEYYATLNSGPVLRV
                     QTHPLQHFAVGDTVAVDVDASQCSVFRGRADQPLAGAH"
     gene            2387..3310
                     /locus_tag="VHN20_06730"
     CDS             2387..3310
                     /locus_tag="VHN20_06730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013165355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX2725497.1"
                     /translation="MNKPMTASPSVKGQEHWTNKGDVRLFLWEKRTGAPEKAGTILFV
                     HGSSMASQPTFDLQVPGVPDASAMDYFASQGFDTWCVDMEGYGRSDKHRDINSDIATG
                     ADDLSAASAYIMKTRDTGPLLVYGISSGALRAAAFAERHPDRVKRLALDAFVWTGEGS
                     PTLEDRRKKLPEFKARNRRPIDRAFVHSIFNRDHPGTGDDKVIEAFADAILALDDSVP
                     TGTYVDMCSKLPLVDPAKITVPTIIMRGQYDGIAGFDDLVEFFKRLPNPDKQFAVMPG
                     IAHASLQQKNYRIVQHILLAFFTQPEPVYRG"
     gene            3349..>3989
                     /locus_tag="VHN20_06735"
     CDS             3349..>3989
                     /locus_tag="VHN20_06735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013945839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEX2725498.1"
                     /translation="MRLVTFEDRQGRRVGVLDGDAIADVTAAAPDLPKDIVDYCRGER
                     LKDLKQALERAPRLKRGDVKLLAPFPRPAKNIFCVGKNYHEHAREFHDSGFDASATSA
                     IPDLPIIFTKAATTVIGPGDPIPGSSDATNSVDYEGELTVVIGKGGRGISKAEAYRHV
                     FGYTIINDVTSRTLQHAHKQWFLGKNLDGFCPMGPAVVTADEIPDATKLRLETR"
BASE COUNT          676 a         1364 c         1256 g          693 t
ORIGIN      
        1 agttgcgaac ggcgctcgtc atcaccggtc cgctcgtggc gccggcgatc ctgtctggaa
       61 cgctgctcgc attcgtcaac gccatcgcgc tgttcggatc gcaggccatc atcggccttc
      121 ccgggcggat cgtgaccttg ccgacgcgca tctattcgct gttcgactat ccgcccgaat
      181 acggcctcgc ctcggcgctg tcgctgctgt tcgtgctgat cacggtggtc gcgctctacc
      241 ttcagcgcgc cttcctggcg cggcgctcgt tcgtgacgct cgctggcaag ggctcgcggc
      301 cgcagctcgt cgacctcggc accggccgct gggtgctgtt cgggttctgc gtcctgatct
      361 tcatcgtcgc gatcgtggca ccgtattcgg cgctgctcgc cgtatcgttc tcgaaatcct
      421 ggggtctcga gttctggaag aacctgacgc tcgccaacta caagttcgtg ctcgtcgact
      481 acgacgtgac gcggcgggcc atcggcaaca gcctgctgct ggcgaccatc gccgccacga
      541 tcgcggtgct gctcggcagc atcatttcat ggatcgatct gcgcacgcgg ctgccggggc
      601 gcaagctcct cgattacgcc gccctcgtgc cgctcgggct gcccggtatc gtgatggcag
      661 tggcgctgat ccagttctgg ctcatgatgc cgatcgccct ctacggcacg ctcgccatcc
      721 tgctccttgc gtatgtcggg cgctatattc cgctcggcgt gcgcgccgcc aacgcctcgc
      781 tgcgccaggt cgacgcgtcc cttgaggaaa gcgcccgcat cctcggcgcc aaatggggca
      841 cgaccatgcg cgaggtgacc ctgccgctga tccgcccggg cctgttcgcg ggctggctgc
      901 tcgtcttcgt tccggtcatc caggagctga gcgcctcgat cctgctgttc agctcgagct
      961 cgatcacgct ggcggtcgcg atctacaacc tttacgagac gggcgcaacc gagcgggtgg
     1021 cagcgctcgc catgatcaac atggtgatca tcgcggttgc gatctggctc gccaacaagt
     1081 tcggcggggg tggcatcgga cgcggctcca acgtcgagaa cacacgcgga ggattgggca
     1141 cctgatggcc ggcatcacga tcagaggact gtcgaaaacc tataccggca ccgacagcga
     1201 tatggctgcc gtcgccgatc tggacctcga catccgcgac aacgagttcg tcacgctgct
     1261 cggtccgagc gggtgcggca agaccacgac gctgcgtctg atcgccggct acctgcagcc
     1321 tgacagcggc acgattcacg tcaacagccg cctcctgtcg gcatccgacc acgtggtccc
     1381 gccggaagag cgcggcatgg ggatggtgtt ccagaactac gccgtgtggc cgcacaagac
     1441 ggtgttcgag aacgtcgtgt tcgggctcaa gctgcgcaag gtgccgagcg cccaggcgcg
     1501 cgagcgcgtc cagaaaaccc tcgagctggt caacctgacc ggctacgaga agcgctaccc
     1561 caacgagctc agcggcggcc agcaacagcg cgtcgcgctc gccaggagcc tcgtggtcga
     1621 gcccgacatt ctgcttctcg acgagccgct cagcaatctc gacgccaagc tgcgcgagcg
     1681 catgcgcgtg gagttgaagc agctgcagcg ccgtaccggc atcaccttcg tctatgtgac
     1741 gcacgaccag gcggaggcgc tggcgctgtc cgatcatatc gccgtgatcc acaatgggcg
     1801 gctgcagcaa tacgggacgc cgttcgacgt ttacgcgagg ccggccaacc ggctggtcgc
     1861 cgatttcatg gggctcgtga acctcgtgcc gggcaccgtc gccgaagtgg cccaaggacg
     1921 cggcaccgtc gtcgtcggcg ccgacctcaa gttgaacgtg ccggtgccgg aaggcgccgc
     1981 caggggcgag ccgatcgaga tcgccatccg gccggagaac atccatttgc ggcgcccgaa
     2041 cgggacggcg acggcgctgc cgctcgccac cgtgtccgac cgcaccttcc tcggcaacat
     2101 caccgaatat tacgcgaccc tgaattcggg gcccgtgctg cgtgtgcaga cgcatccgct
     2161 gcagcacttc gccgtgggcg acacggtggc ggtcgacgtc gatgcgagcc aatgcagcgt
     2221 gttccgcggc cgtgccgacc agccgctcgc cggcgcccat tagagcggtg tgagttcaag
     2281 atgaacgcac gccgctctcg ttgctcgtgt cgcatgatct tcttcggcga agcggtgccc
     2341 actttgccgg atcatgctta gatccgttca gtcaggagtt ccgaacatga acaagccgat
     2401 gaccgcaagc ccgtccgtca aggggcagga gcattggacc aacaagggcg acgtcaggct
     2461 cttcctctgg gagaagcgca cgggcgcccc ggaaaaggcc ggcacgatcc tgttcgtcca
     2521 cggctcgtcg atggcctcgc agccgacctt cgatctgcag gtgccgggcg tgcccgacgc
     2581 gtcggccatg gattatttcg cgtcgcaggg tttcgatacg tggtgcgtcg acatggaggg
     2641 ctacggccgc tccgacaagc accgcgacat caattccgac atcgccaccg gcgccgatga
     2701 tctctccgcc gcctccgcct acatcatgaa aacgcgcgac accgggcctc tcctggtcta
     2761 cggcatctcg tcgggcgcgc tgcgcgcggc ggctttcgcc gagcgccatc ccgaccgcgt
     2821 caagcggctc gcgctcgatg ccttcgtgtg gaccggggaa ggcagcccga cgctggagga
     2881 ccggcgcaag aagctcccgg aattcaaggc caggaaccgg cgcccgatcg accgcgcctt
     2941 cgtccatagc atcttcaacc gcgaccatcc cgggacgggc gacgacaagg tgatcgaggc
     3001 tttcgccgac gcgatcctgg cgctcgacga ttccgtgccg accggcacct atgtcgacat
     3061 gtgctcgaag ctgccgctgg tcgatccggc caagatcacc gtgccgacga tcatcatgcg
     3121 cggccagtac gacggcattg ccggcttcga cgaccttgtc gagttcttca agcgcctgcc
     3181 caatcccgac aagcagttcg cggtgatgcc gggcatcgcg catgcctcgc tgcagcagaa
     3241 gaactatcgt atcgtgcagc acatcctgct cgcctttttc acgcagccgg agcccgttta
     3301 ccgcggctga tgcccctcat tggacaaaat ggatttggag gaccgaccat gcgtctcgtg
     3361 accttcgagg atcggcaagg caggcgggtc ggcgtgctcg acggggacgc catcgccgac
     3421 gtcaccgcgg cggcgccgga cctgccgaaa gacatcgtcg attactgccg cggcgagcgt
     3481 ttgaaggacc tcaagcaggc gctcgagcgg gcgccgcgcc tcaagcgcgg cgacgtgaag
     3541 ctgctggcgc cgttcccgcg gcctgcgaaa aacatctttt gcgtcggcaa gaactatcac
     3601 gagcacgcgc gcgagttcca cgacagcggc ttcgacgcct cggcaacgag cgccatcccg
     3661 gacctgccga tcatcttcac caaggcggcg acgacggtga tcggccctgg cgatccgatc
     3721 ccgggctcga gcgacgccac gaactcggtc gattacgagg gcgagctcac ggtcgtcatc
     3781 ggcaagggcg ggcgcggcat cagcaaagcc gaggcctacc gccacgtgtt cggctacacg
     3841 atcatcaacg acgtcacctc gcgcacgctg cagcatgcgc acaagcaatg gttcctgggc
     3901 aagaacctcg atggcttctg ccccatggga ccggcggtcg tcaccgccga cgagatcccg
     3961 gacgcgacga agctgcgcct cgagacgcg
//
LOCUS       DATAIQ010000404         2649 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_113939, whole genome shotgun sequence.
ACCESSION   DATAIQ010000404 DATAIQ010000000
VERSION     DATAIQ010000404.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2649)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2649)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2649
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_113939"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..950
                     /locus_tag="VHN20_06740"
     CDS             <1..950
                     /locus_tag="VHN20_06740"
                     /inference="COORDINATES: protein motif:HMM:TIGR03483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725499.1"
                     /translation="ALEGIIRVSVVATGIDHALLTKAPEIAATEQRIAEVAERLRAEA
                     RARVTPAVPAVTQATPATRPVLHTDPVAPKPIATMPAPMAAPTPAAIPAMPAPAVAPM
                     HTPMAAAMPAPLPPAMPAAAPVAAAAAMPPAAPLAQPAQALRSDTVPPVQTRPAVPFA
                     PPQAAVPVEDLAPGAPFIPPQPERALRPTRMPRVEDLPLPAQNQLRATRGEGDAVGHD
                     PKRMTLLQRLATVGFGRKDDSPAPQPAEKPAAHRAAEAPQRPAMSPVHAEYTKRPPAP
                     QGQRPAQGGLDAHGRPPVPPRGLEDEHLEIPAFLRRQTN"
     gene            1234..2181
                     /gene="lpxC"
                     /locus_tag="VHN20_06745"
     CDS             1234..2181
                     /gene="lpxC"
                     /locus_tag="VHN20_06745"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008759 - UDP-3-O-[3-hydroxymyristoyl]
                     N-acetylglucosamine deacetylase activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HEX2725500.1"
                     /translation="MKQNQQMTLRAPAVVSGAGVHSGADVRIVIHPAEADHGIAFLRT
                     GLANGRDRLIDARHVAVTATELCTVIGDRDTGAVATIEHLMSAFYGIGIDNALVEIDG
                     PEVPILDGSAEPFVEAIDRVGTVVVNAHRRYLKVLKPVRVENGNAFAELRPKDRGFRV
                     DVEIDFTNPVIGRQRRAVELSSSVYRREVARARTFGFMRDVERLWKSGFALGASLENT
                     VAIGEDAIINPEGLRYADEFVRHKILDAIGDLALAGLPLLGTYRSYCGGHRLNLAVVE
                     ALFASRANYAIVDSGRRRETGYAEIGNGIAVPAFAPDIH"
BASE COUNT          423 a          920 c          892 g          414 t
ORIGIN      
        1 aggccctcga aggcatcatc cgggtctcgg tcgtcgcaac cggtatcgac cacgccctcc
       61 tcaccaaggc accggaaatc gcggcgaccg agcagcgcat tgccgaggtt gctgagcgcc
      121 tgcgggccga ggcgcgggcc cgggtcacgc cggccgtgcc ggcggtgacc caggccacgc
      181 ctgcgactcg ccccgtcctg cacaccgacc cggtcgcgcc gaagccgatc gcaacgatgc
      241 ctgcgccgat ggccgctcct acgccggcag caattccggc aatgcctgcg ccggccgtcg
      301 cgcccatgca cacgcccatg gccgccgcga tgcccgcgcc tttgccgccg gccatgccgg
      361 ccgcagctcc ggtcgccgcc gccgcggcga tgccgccggc cgcacccttg gcgcaaccgg
      421 cgcaagcgct ccgcagcgac accgtgccgc ccgttcagac gcgcccggcc gtgccgttcg
      481 caccgccgca ggctgccgtg ccggtcgagg atctggcccc gggcgcgccg ttcattccgc
      541 cgcagcccga gcgcgccctg cgcccgacgc gcatgccgcg cgtggaggac ctgccgctgc
      601 cggcgcagaa tcagctgcgc gcgacgcggg gcgaaggcga cgccgtcggt cacgacccca
      661 agcgcatgac tttgctgcag cggctcgcaa ccgttggttt cggacgcaag gacgattcgc
      721 cggcgccgca gcccgccgag aagccagcag cccatcgtgc cgccgaggcg ccgcaacggc
      781 cggcgatgtc tcccgttcac gcggaatata cgaagcggcc gccggcgccg caggggcagc
      841 gcccggcgca aggcgggctg gatgcgcatg gcaggccgcc ggtcccgccg cgcgggctcg
      901 aggacgagca cctggagatt cctgccttcc tgcgccgcca gacgaactga ttctggcggc
      961 ggccgcagaa tgggacgggc cgggccgctt ggcgcgcctc ggcctgccct taaatcactt
     1021 gcgttttcaa ttagttacaa ggttagtgca gttgtaacag agcgtaagaa agcgtgattt
     1081 ggcgtgggtg ccggccgcga ttatggtgca agcacgtcaa aagaagggca ggcgcttctg
     1141 cagcgccaag acccctgggg ctcaagaacg gacaggtctt ctcggcggcg gacgacagtc
     1201 ttgcaacgat aaggcgtggc cgaggtcgcg ggaatgaaac aaaatcaaca gatgacgctt
     1261 cgcgcgcctg ctgtcgtttc gggggcaggt gttcattcgg gggctgacgt aagaatcgtc
     1321 atccatccgg ccgaagccga tcacggcatc gcttttctcc gcacgggtct ggcgaacggg
     1381 cgtgatcgct tgatcgatgc gcgccacgtc gcggtcaccg ccaccgagct gtgcacggtc
     1441 atcggcgatc gtgacacggg cgccgtggcg accatcgagc acctgatgtc ggccttctac
     1501 ggaatcggca tcgacaacgc gctcgtcgag attgacggac cggaagtgcc gattctcgac
     1561 ggcagcgcgg aacccttcgt ggaggcgatc gaccgggtcg gcaccgtcgt cgtcaacgca
     1621 catcgccgct atctgaaagt cctgaagccc gtccgcgtcg agaacggcaa cgcctttgcc
     1681 gagctgcgtc cgaaagaccg cggcttccgc gtcgacgtcg agatcgattt cacgaatccg
     1741 gtgatcgggc gccagcgccg cgccgtcgag ctgtcgagct cggtctaccg ccgcgaggtg
     1801 gcgcgcgccc gcacgttcgg cttcatgcgt gatgtcgagc gcttgtggaa atcgggcttc
     1861 gcgcttggcg cgtcgctcga gaacacggtc gccatcggcg aggacgccat catcaatccg
     1921 gagggtctgc gctacgccga cgagttcgtg cggcacaaga ttctcgacgc catcggcgac
     1981 ctggcgttgg ccgggctgcc gctccttgga acctatcgct cgtattgcgg cggccatcgc
     2041 ctgaacctgg cggtggtgga ggccctgttc gcgagccgcg ccaactacgc catcgtcgac
     2101 agcggccggc gccgcgagac ggggtatgcc gagatcggca acggcatcgc cgtcccggct
     2161 ttcgcccccg acatccacta gttgcggccg gccgatctgg ccggcctttc gctgattctc
     2221 gcaaaagcgc gttccccggg gccaggttcc ggcgcgtctt gttcgacgcc tgggcgtgat
     2281 ccggcgacgc gggtggacgt cgccgggcac aggattcacg tgaaagcaga gcgggcggtc
     2341 cgatccgagg cgaccagctc tggtttgccg cctgattcaa gcgttgcgta tcggcattta
     2401 ttccgctcgc cgcggcatcc cgccatcaaa gcgccacctt gcgacgacgt agttgcaccg
     2461 cggccacggc ggcgagcggc agcactggac ggggttggcg gactcgggcc gcctgggtta
     2521 aagagccttt aaagatccgc gctgatgcgg gccactaggg cagaggacga caaagcatgt
     2581 ctctcgtcaa agcgcttccg ggcacgacca acgtcgcccg cgtgatcgcg ctgatcgccg
     2641 gcagcctgg
//
LOCUS       DATAIQ010000405         3782 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_298681, whole genome shotgun sequence.
ACCESSION   DATAIQ010000405 DATAIQ010000000
VERSION     DATAIQ010000405.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3782)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3782)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3782
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_298681"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..542
                     /locus_tag="VHN20_06750"
     CDS             <1..542
                     /locus_tag="VHN20_06750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007065578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725501.1"
                     /translation="RTLPMILMVLALAPGMVLGQGDTRSAQVKRGEYLVTIGLCHDCH
                     TPMTKGADGPAPDMSRALSGHPQDIVVRAPATLSEPWVGAMSPTLTAWSGPWGVSFSA
                     NLTPDKETGVLRDFTEEQFVQTLRTGRHQGQGRKILPPMPWPLISKMTDDDLKAVFAY
                     LRQIPAVRNKVPDPIPPAM"
     gene            758..2224
                     /locus_tag="VHN20_06755"
     CDS             758..2224
                     /locus_tag="VHN20_06755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M10 family metallopeptidase"
                     /protein_id="HEX2725502.1"
                     /translation="MSAVNPSGNQNIDGILWGYKWDMTDLTYSFPSGTLSYAYDSING
                     FETFNFAQRAAVHQVMANTAAVCGLTLTHTTEEFSNFRFAEADAVDYGGANDGNHSIP
                     TAEGNPPDPDGFPIYAHGDCWFNRTSYNAPVPGNFAYSAGMMHELGHALGLKHGHVTQ
                     FGHGILFPMLPHAHDGFEFSVMTYHQFPGDPDPLLTNPDHPTTWMQNDIAALQYLYGA
                     NFAHNAGNTVYSWSPTTGQMFVNGSGRAVPETNLIFMTIWDGGGTDTYNLSNYRTNLK
                     VDLNPGGWTITSAAQLADLAHSHTARGNIANALLFEGNTASLIENAIGGSGNDYMVGN
                     VKGNQLAGGTGADRLFGLGGNDALSGAGGKDRLDGGIGNDVLIGGADCDTLIGGYGRD
                     VFDFNSVAESRRGSAHDTVYFRRVDGDKIDLSSIDADTDGAAGNQAFRFIGAHAFTGV
                     DGQLRFSGGLLQGDTNGDRIADIEIKVIGALVGGDVIL"
     gene            complement(2333..3418)
                     /locus_tag="VHN20_06760"
     CDS             complement(2333..3418)
                     /locus_tag="VHN20_06760"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX2725503.1"
                     /translation="MLIALSAFALRSIRRLLRGLTQVMEALVRRDLSADVPGCGRSDE
                     IGAMARSVQVFKQNAVTMERLEREQAQQKELADAEKKRARGDLAASFSANIGGLVEQL
                     STAATRMENTAQSMSVTAERTGSQSSLVASSADETASNVQAVAAATEELAASAQEIGG
                     QVTQSSRIAARALEDAHRTNEIVQALAQGAQKIGDVVQLIRTIADQTNLLALNATIEA
                     ARAGEAGRGFAVVASEVKELASQTARATEDITSQITQIQGATLGAVDAIRQITSTIEE
                     VNHIASAVAAAVEEQHAATQEIARNVAQAAKGTEAVTQNIAQVRSAADDTGTAAGEVL
                     SAATTLSRDSASLNREVQTFLDGIQAA"
     gene            3470..>3782
                     /locus_tag="VHN20_06765"
     CDS             3470..>3782
                     /locus_tag="VHN20_06765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725504.1"
                     /translation="MGPEPLGLFAQRGLCVSDQAVPQRAPRLIRFAPVLGVGGIELVV
                     GALQQKRADAQDRAAMRPFEKGFQFIIDGARAEDVELLAESTLHLDATMHDAVKLLAE
                     RL"
BASE COUNT          665 a         1258 c         1188 g          671 t
ORIGIN      
        1 agcgcacact cccgatgatt ctgatggttt tggcactggc gccagggatg gtgctcgggc
       61 aaggcgatac gcgcagcgcg caggtgaagc gtggcgaata cctcgtcacg atcggcttgt
      121 gccacgactg ccatacgccc atgaccaagg gggccgacgg cccggccccg gacatgtcac
      181 gggcattgtc gggccacccg caggacatcg tcgtgagggc gccggcgacg ctgtccgagc
      241 catgggtggg tgcgatgtcg ccgaccctga cggcgtggtc gggcccgtgg ggcgtgagct
      301 tctccgccaa tctcacgccc gacaaggaga ccggcgtgct gcgcgatttc accgaagagc
      361 aattcgtgca gacgctgcgc accggccgcc accagggcca gggcaggaag atccttccgc
      421 cgatgccgtg gccgctcatc tcgaagatga ccgacgacga cctcaaggcg gtgttcgcgt
      481 acctccggca gatccccgcc gtcaggaaca aggttccgga cccgatcccg ccggcgatgt
      541 gaaacacgcc tggaaaacgt tcgggaaaac ctaggaaaga tccggaacag gcacggaaaa
      601 acttccggag taatcctgga tcgctcccca gccgacagcc ttaacgacgc ggttgccgag
      661 cttcggagat gcatcccacg cttcaagaac ccgaaacggg cagttcgcgg ggatggtggg
      721 cgcaacgcaa cccgcccgcc attcaggaga atcaccagtg tctgcggtca acccgagcgg
      781 caatcagaac atcgacggca tcctttgggg ctacaaatgg gacatgacgg atctgaccta
      841 ttcgttcccg tccgggaccc tcagctatgc ctatgattcc atcaacggct tcgagacctt
      901 caacttcgcg caaagggccg ccgtccatca ggtcatggcc aacaccgccg ccgtctgcgg
      961 tctcacgctg acgcatacga cggaggagtt ttccaacttt cgcttcgccg aggccgatgc
     1021 ggtcgattac ggcggggcca acgacggcaa ccattcgatc ccgacggcgg aaggaaatcc
     1081 gcccgacccg gatgggtttc cgatctacgc gcacggggac tgctggttca atcgcacgag
     1141 ctacaacgcc ccggttcccg gcaacttcgc ttattccgcc gggatgatgc atgagctcgg
     1201 tcacgcgctc ggcctcaagc acgggcatgt gacgcagttc gggcatggca tcctgttccc
     1261 catgctgccg catgcgcacg acggcttcga attctcggtg atgacgtatc accagttccc
     1321 gggtgacccc gatccgcttc tcaccaatcc ggatcatccc acgacctgga tgcagaacga
     1381 catcgcggcg ctgcaatatc tctatggcgc aaacttcgcc cacaatgccg gcaacaccgt
     1441 ctattcgtgg agcccgacga ccgggcagat gttcgtcaac ggctcaggac gggcggtgcc
     1501 cgagacgaat ctgatcttca tgaccatctg ggacggcggc ggcaccgata cctacaatct
     1561 gtcgaactac cgcaccaacc tgaaggtcga cctcaaccct ggcggatgga cgatcaccag
     1621 cgcggcgcag ctcgccgatc tcgcccattc ccacacggcc cgcggcaaca tcgccaacgc
     1681 cctgctcttc gaaggcaaca cggcatcgct gatcgagaac gccatcggcg gatccggcaa
     1741 cgactacatg gtcggcaacg tcaaaggcaa tcagctcgcc ggcggcaccg gagcggatcg
     1801 gctgttcggc ctcggcggca acgacgcgct gtccggcgcc ggcggcaaag accggctcga
     1861 cggcggcatc ggcaacgacg tgctgatcgg cggggccgac tgcgacaccc tgatcggcgg
     1921 ctatggtcgc gacgtgttcg acttcaactc cgtcgccgaa tcgcgccgcg ggtccgccca
     1981 cgacacggtg tatttccgtc gtgtcgacgg cgacaagatc gatctgtcca gcatcgatgc
     2041 cgatacggat ggtgcggctg gcaaccaggc gttccgcttc atcggcgcgc atgcgttcac
     2101 cggggtcgac gggcaactgc gtttcagcgg cggcctgctg cagggcgaca cgaatggcga
     2161 ccgcatcgcc gacatcgaaa tcaaggtgat cggcgccctc gtcggcggtg acgtcatcct
     2221 gtagcggcag gtcaggtgcg gcgttgcgaa gcggtaaacc gcttgagcag tagcccgctc
     2281 ggagcgctcc gcgccccgcc gcgtagtaac ggcgccttcg ctggcaaagg ctctaggccg
     2341 cctgaatgcc gtccagaaag gtctgcactt cgcggttcag cgatgccgag tcacgcgaca
     2401 gcgtggttgc ggccgacagc acctctccgg cggcggtgcc ggtgtcgtcg gccgccgagc
     2461 gaacctgcgc aatattttgc gtcactgcct cggtgccttt agccgcttgc gcgacgttcc
     2521 gggcgatttc ctgagtcgcg gcatgctgct cctcgactgc cgcggcgacc gcactggcga
     2581 tgtggttgac ttcctcgatc gtcgacgtga tctggcggat cgcatcgacg gcgccgagag
     2641 tcgcgccctg gatctgcgtg atctggctcg tgatgtcttc ggtggcgcgg gcggtctggc
     2701 tggctagctc cttgacctcg ctggcgacga ccgcgaagcc gcggccggcc tctccggcgc
     2761 gtgctgcctc gatggtggca ttgagcgcga gaagattggt ctggtcggcg atcgtgcgga
     2821 tcagctgtac gacatcacca atcttctgcg cgccctgggc gagggcctgg acgatctcgt
     2881 tggtccgatg cgcgtcctcg agagcgcgcg ctgcgatcct cgaggactgc gttacctgac
     2941 cgccgatctc ctgggcggat gcggcgagct cctcggttgc cgctgcgacc gcctgaacgt
     3001 tgctggcggt ctcgtcggcg gacgatgcga ccaaggaaga ttggctcccg gtcctctcgg
     3061 ccgtcaccga catcgactgg gcggtgttct ccatccgggt tgcggccgtc gaaagctgct
     3121 cgacaagacc cccgatattc gcgctgaacg aagctgccaa atccccccgt gcgcgcttct
     3181 tctcggcgtc ggcgagctcc ttctgttgcg cctgctcgcg ctcgagcctc tccatggtga
     3241 cggcattctg cttgaagacc tgcacgctgc gcgccatcgc gccgatctcg tcagagcgcc
     3301 cgcagcccgg gacgtccgcc gagagatcac ggcgcaccag ggcttccatc acctgggtca
     3361 agcccctcaa cagcctgcgg atgctgcgca gcgcgaaggc gctcagcgcg atcagcacag
     3421 cgatcacaag gagggttgcc gccgcatatg tcgccaaacc ttgcctggca tgggccccga
     3481 gcctctgggt ctctttgcgc aacgtggcct ctgcgtctcc gatcaggcgg ttccacagcg
     3541 cgcgccgcgc ctgatccgct tcgctccagt gcttggcgtc ggcgggatcg agcttgtcgt
     3601 aggcgcgctc cagcagaagc gggcggatgc gcaggatcgt gcggccatgc gacccttcga
     3661 aaaaggcttt caattcatca ttgatggggc gcgggccgaa gatgtcgagc tgcttgccga
     3721 aagcactttg catctcgacg ccacgatgca tgacgcggta aagctcctcg ctgagcgcct
     3781 tg
//
LOCUS       DATAIQ010000406         6355 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_21530, whole genome shotgun sequence.
ACCESSION   DATAIQ010000406 DATAIQ010000000
VERSION     DATAIQ010000406.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 6355)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6355)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6355
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21530"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..193
                     /locus_tag="VHN20_06770"
     CDS             <1..193
                     /locus_tag="VHN20_06770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018261729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-linked oxidase C-terminal domain-containing
                     protein"
                     /protein_id="HEX2725505.1"
                     /translation="FLERLIERALAMEGTCTGEHGVGQGKMRYLEAEHGPEALDLMRS
                     LKRAIDPNNIMNPGKIVAL"
     gene            264..3827
                     /locus_tag="VHN20_06775"
     CDS             264..3827
                     /locus_tag="VHN20_06775"
                     /inference="COORDINATES: protein motif:HMM:NF024893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA-like C-terminal region-containing protein"
                     /protein_id="HEX2725506.1"
                     /translation="MRDILTVIAALVIAVLTAAVAAPPFIDWGAHRATIEGVLARATG
                     TEARTEGRIDVRLLPSPRIQIDSLQLGGSTPNSPSLQAGGVVAEIALMPLLSGQVRFT
                     DTRLGRAEIRVPTGAGGSWRLPSDFPAVTGLRREWAIENLAVRQLFVTTTTPSTGRTD
                     QFYAESVRIEGQSLIGPWRVEGMTGGVPFRLATGELGSDQTVQVKLAGGGDVHPRFDI
                     EAKLAFENEANAWVPSVSGTAKILFGPPAQVSAAGVPIPVSVQAGFKATGGAVELDPV
                     AVDAGEGGASLRLAGAGLVRIDDPRISFKLEGRRVDIDSFLLSASGRELAARAGTWSL
                     PPVTVPIDLDLSLTSIGLAQEELSNLVARLTLDRGRAQVERIEVEAPGQTRLMLAGEV
                     GLTTQGGASGRVAITSPASDRFARYLAKLGVSGALATFLDGRRLEASADLVHSAPVTS
                     FRNARVTLGDSTLTGNARYTEPEASARGRLEAQIAVQGLDLARLPQMSSLFEATPNLD
                     IGFILDAQDVRHGGSKGAGRISARIQSDAPSLVVEALQITDLAGANAQVSGRIEPDGS
                     GRIAGRVTAERAAPLVDLLGSVWIGGVSKFVPHFLREGELDINVVAERAAPSQRSGGL
                     RLKTTARGNAAGGLFEAEVLSADGFTENLNLRLATENTGLWVDRPDAAALRRPSHLDL
                     RGVRVPSGNFNVTVAGDVGGVRINTTRPIALGAGDDVIDSGEADLNTADITPFLVLLG
                     DGAGVEPPVPAQVRVTLGRERDASLVMLSGRVADSAIQARLWGRTRSEVSGTVTAERL
                     SMPWLAAAFALNAPPDPRATALWSTARFGQTRRVLNGGEATFTVGRLDLGRNLVARDA
                     GFALTLTQDGIAVRDVKGTLAGGELTGAFTIGRQGSLASVAGEGAARDLSLIALSPAS
                     AFGGKVSGSLKFGASGETMSALVANLAGAGTARISDLEVANADPNALDRSITRALKES
                     DPLAPRRLEAIVADELGRGPLRGQVLSAPTTLIGGALRISPFIADAGAANWQGAVSLD
                     FKTLAVEAKGALSAKTVPKGWSGNPPYVHLGWRGPLDKPAREIDVAPLVNGLAGIVLQ
                     RELEKIEIFEADAHERARMHQRRLMDWSREQARQAEEAARQREEEAARLRALEDARRR
                     AEEARQVRLRQQQQEERARALQNPYIPMDIRPPVQNQQPPG"
     gene            complement(3846..4082)
                     /locus_tag="VHN20_06780"
     CDS             complement(3846..4082)
                     /locus_tag="VHN20_06780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012331042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribbon-helix-helix domain-containing protein"
                     /protein_id="HEX2725507.1"
                     /translation="MSGRKSGIIKRSVAIAGHRTSVSLEAPFWDALKDMAQARGVSVQ
                     FLIGEIDAARGSHNLSSAIRVFVLNELKRTAPAG"
     gene            complement(4079..4267)
                     /locus_tag="VHN20_06785"
     CDS             complement(4079..4267)
                     /locus_tag="VHN20_06785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020185442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4169 family protein"
                     /protein_id="HEX2725508.1"
                     /translation="MADIVNLRKARKAKARAEKEAQAAENRVKFGRSKAQRDLGAASN
                     RLAERRLEAHRRDGDKDE"
     gene            complement(4280..5707)
                     /gene="fumC"
                     /locus_tag="VHN20_06790"
     CDS             complement(4280..5707)
                     /gene="fumC"
                     /locus_tag="VHN20_06790"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007600964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004333 - fumarate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HEX2725509.1"
                     /translation="MSPSPARAEAATQAATRTETDTFGPIEVPADRYWGAQTQRSLMN
                     FRIGGERMPIPLVRALGLVKQAAALVNKDLGELEPRVADAVASAAAEVVQGKYDDEFP
                     LVVWQTGSGTQSNMNANEVIASLANERLGGKRGGKSPVHPNDHVNRGQSSNDSFPTAM
                     HIAAAREISERLLPALRHLHRALDDKAKKFVDIVKIGRTHLQDATPVTLGQEFSGYAA
                     QVELAMTRIEATLPGLYALAQGGTAVGTGLNAHAKFADAFAAKVAQLTNLPFTSAANK
                     FEALASHDALVFAHGALTSLASGLFKIANDIRLMGSGPRSGLGEISLPENEPGSSIMP
                     GKVNPTQAEAMTMVCTQVMGNNATVAFAASQGHFELNVFKPVIANAVLQSIRILADAA
                     VSFADHCVVGIEPNRERINELMQRSLMLVTALAPKIGYDNAAAIAKAAHKKGTTLKQE
                     AVGSGHVTAEEFDAVVRPETMLSPG"
     gene            5778..>6355
                     /locus_tag="VHN20_06795"
     CDS             5778..>6355
                     /locus_tag="VHN20_06795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015927433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HEX2725510.1"
                     /translation="MQSEIARPLFRPPAPEPLREPLGLVQYLRQLRANPLATWTREHF
                     EKPIVAAESALGRITVVSAPEAIRYVLVDNAGNYRKDDLQRRILAPALGNGLVTAEGE
                     EWRLQRRTLAPLFAARHVTGFFPAMARAGERVVQRWRRHQGRVIDVSLEMTRVTLDVL
                     EQTVFTHGVRRDPDALGRAITRYFEALGPVDPL"
BASE COUNT          921 a         2183 c         2226 g         1025 t
ORIGIN      
        1 gtttctcgag cggctcatcg agcgtgccct ggcgatggaa ggaacctgca ccggcgaaca
       61 cggtgtcggg caggggaaga tgcggtatct tgaggccgag cacgggccgg aagcgctgga
      121 cctgatgcgg agcttgaagc gggcgatcga tcccaacaac atcatgaatc cgggaaaaat
      181 cgttgcgctt tgacgctttg ctcgttcggc ccgccacggc ccggacatcg ccgacctcaa
      241 gctgaactgg gaccgatcga ccattgcgag acatcctgac cgttattgcc gcgctggtga
      301 tcgccgtgct cacggcagcc gtcgccgcgc cgccattcat cgactggggc gcgcatcgcg
      361 cgacgatcga gggcgtgctc gcgcgcgcca cgggaacgga ggcgaggacc gaaggccgca
      421 tcgacgtaag gctgctgccg tcgccgcgca tccagatcga ttcgctccag ctcggcggct
      481 cgacgccgaa ctcgccgtcg ctgcaggccg gcggcgtggt cgcggaaatc gccctgatgc
      541 cgctgctgag cgggcaggtg cgcttcaccg acacgcgcct cggccgcgcc gagatccgcg
      601 tcccgacggg tgccggcggc agctggcgcc tgccgtcgga tttcccggcc gtgacggggc
      661 tgcggcgcga gtgggcgatc gagaatctcg cggtgcggca gctcttcgtc actaccacca
      721 cgccgagcac cgggcgcacc gatcagtttt acgccgagag cgtgcgtatc gaggggcaat
      781 cgctgatcgg cccgtggcgc gtcgagggca tgacgggcgg cgtgccgttc cggctcgcga
      841 caggcgagct cggctccgac cagaccgtgc aggtcaagct ggccggaggc ggcgacgttc
      901 atccgcgttt cgacatcgaa gccaagctcg cgttcgagaa cgaagccaat gcctgggtcc
      961 cgagcgtctc cgggacggcc aagatcctgt ttggtccgcc ggcccaggtt tcggccgccg
     1021 gggttccgat cccggtgtct gtgcaggccg gcttcaaggc cacgggcggc gcagtcgagc
     1081 tggacccggt tgccgtcgat gcgggggagg gcggggccag cctgcgcctc gccggcgccg
     1141 gtctggtgcg catcgacgat ccgcgcatct cgttcaagct ggaaggccgc cgggtcgaca
     1201 tcgacagctt cctgctttcg gcgagcggac gcgagctcgc cgcccgggcg gggacgtgga
     1261 gcctgccgcc cgtcacggtg cctatcgacc tcgacctgtc gctcaccagc atcggactgg
     1321 cgcaggaaga gctctccaac cttgtcgcac gcctcacgct cgaccgcggg cgggcgcagg
     1381 tcgagcgtat tgaggtggag gcgcccggcc agacgcgtct catgctcgcc ggcgaggtcg
     1441 gcctgaccac gcagggcggc gccagcgggc gcgtcgccat cacctcgccg gcttccgatc
     1501 gttttgcccg ttatctcgcc aagctcggcg tgtcgggcgc gctcgccacc ttcctcgatg
     1561 gacgtcgcct cgaggcctcg gccgatctcg ttcactccgc cccggtcacg tcgttccgca
     1621 acgcgcgcgt cacgcttggc gattccacgc tgaccggcaa tgcgcgttac actgagcccg
     1681 aagcgtccgc gcggggccgc ctggaagcac agatcgcggt ccaggggctc gatctggcgc
     1741 gcttgccgca gatgagcagc ctgttcgagg cgacgcccaa tctcgacatc ggcttcatcc
     1801 tcgatgccca ggacgtgcgc cacggcggca gcaagggcgc gggccgcatc tcggcgcgca
     1861 tccagtcgga cgctccttcg ctcgtcgtcg aggctttgca gatcaccgat ctcgccggcg
     1921 ccaacgcgca ggtcagcggc cgcatcgagc cggatggttc gggacgcatc gccgggcgcg
     1981 tgacggctga gcgggcggct ccgctcgtcg accttctcgg cagcgtgtgg atcggcgggg
     2041 tgtcgaaatt cgtgccgcac ttcctgcgcg aaggcgagct cgacatcaac gtcgtggccg
     2101 agcgcgccgc gccaagccag cgctcgggcg ggttgcgcct caagaccacg gcccgcggca
     2161 acgcggccgg cggattgttc gaggccgagg ttctgtccgc cgacggcttc acggaaaatc
     2221 tgaacttgcg cctggccacg gaaaacaccg ggctttgggt cgaccgcccg gacgccgccg
     2281 ccttgcgccg gccatcgcat ctcgatctgc gcggcgtgcg tgtcccgtca ggcaacttca
     2341 acgtgacggt cgcgggtgac gtcggcggcg tgcgcatcaa cacgacgcgg ccgatcgcgc
     2401 ttggcgcggg cgacgacgtg atcgacagcg gcgaggccga cctgaacact gccgacatca
     2461 cgccgttcct cgtcctgctc ggcgacggcg ccggcgtcga acctcccgtt ccggcgcagg
     2521 tgcgcgtgac gctgggccgc gagcgcgacg cgtccctcgt catgctttcg ggacgggtcg
     2581 ccgactcggc aattcaggcg cgtttatggg ggcggacgcg atcggaggta agcggcaccg
     2641 tgacggccga gcgtctctcg atgccctggc tcgccgccgc cttcgccctc aacgcgcctc
     2701 ccgacccgcg cgcgacggcg ctgtggtcga cggcccgctt cggacagacc cggcgcgtgc
     2761 tgaacggggg cgaggccacg ttcaccgtcg gccggctcga cctcggccgg aacctcgtgg
     2821 cgcgcgatgc cggcttcgcg ctcaccttga cccaggacgg cattgccgtc cgcgacgtca
     2881 agggcacgct cgccggtggc gagctgaccg gcgccttcac catcgggcgg cagggatcgc
     2941 ttgcttcggt cgcaggcgag ggcgccgctc gcgatctgtc gctgatcgcg ctcagcccgg
     3001 cgtcggcctt cggcggaaag gtctcgggca gcctcaagtt cggcgcgtcc ggcgagacca
     3061 tgtcggcgct cgtggccaat cttgccgggg ccggcacggc acgcatcagc gatctcgagg
     3121 tcgcgaatgc cgatccgaac gcgctcgatc gcagcatcac gcgcgcgttg aaggagagcg
     3181 atcccctggc gccacggcgc ctggaggcga tcgtggccga cgagttgggt cgcggcccgt
     3241 tgcgcggcca ggttctttcg gcgccgacga cgctcatcgg cggcgccttg cgcatcagcc
     3301 cgttcattgc cgatgccggc gcggcgaact ggcagggcgc cgtgtcgctc gacttcaaga
     3361 ccctcgcggt cgaggccaag ggcgcgttga gcgcgaagac cgtgccaaag gggtggagcg
     3421 gcaatcctcc ttacgtccac ctcggctggc gcgggcccct ggacaagccg gctcgcgaga
     3481 tcgacgtggc gcctctcgtc aacggcctcg ccggcatcgt cctgcagcgc gagctcgaga
     3541 agatcgagat attcgaagcc gacgcccacg aacgcgcgcg catgcaccag cgccggttga
     3601 tggactggag ccgtgagcag gcgcgtcagg ccgaggaagc ggcacgccag cgggaggagg
     3661 aagcggcccg tcttcgcgcc ctcgaggacg cccggcggcg tgcggaggaa gcgcgccagg
     3721 tgcgtctgcg gcagcaacag caggaggagc gcgcgcgcgc cctgcagaat ccttacatcc
     3781 cgatggacat caggccgcct gtgcaaaatc agcagccccc gggctgaccc gggcgcaagc
     3841 tcccttcagc cggccggtgc cgttcgcttg agctcattca ggacgaagac gcggatcgcc
     3901 gacgacaggt tatggctgcc gcgtgccgcg tcgatctcgc cgatcaggaa ctggacggat
     3961 acgccgcgcg cctgcgccat gtccttgagc gcgtcccaga acggggcttc cagcgacacg
     4021 ctcgtgcggt ggccggcgat ggcgacggac cgcttgatga ttcccgactt gcggccgctc
     4081 attcgtcctt gtcgccgtcg cgccggtgcg cctccagcct gcgctcggcg agacggttcg
     4141 atgcggcgcc gagatcgcgc tgcgccttcg accgcccgaa cttgacgcgg ttctcggcgg
     4201 cctgcgcttc cttctcggcg cgcgccttgg ccttgcgggc cttgcggagg ttgacgatgt
     4261 cggccacgcc agcgcgcctt caccctggcg acagcatcgt ctcgggacgg acgaccgcat
     4321 cgaactcctc ggcggtgaca tgtccggagc cgactgcttc ttgcttgagg gtcgtgcctt
     4381 tcttgtgcgc cgccttggcg atcgcggcgg cgttgtcgta gccgatcttc ggcgccagcg
     4441 ccgtcacgag catcagagag cgttgcatca gctcgttgat gcgttcccgg ttcggctcga
     4501 tgccgacgac gcagtgatcc gcgaagctga ccgccgcatc ggcgagaatg cggatcgact
     4561 gcagcaccgc gttggcgatg accggcttga acacgttgag ctcgaaatgc ccctggctcg
     4621 ccgcgaaggc gacggtggcg ttgttgccca tcacctgcgt gcacaccatg gtcatggcct
     4681 cggcttgcgt cgggttgacc ttgcccggca tgatcgacga gcccggctcg ttttccggca
     4741 ggctgatctc gccgaggccc gaacgcgggc cggagcccat caggcggatg tcgttggcga
     4801 tcttgaacag gcccgacgca aggctggtga gggcgccatg cgcgaacacc agcgcgtcgt
     4861 gcgaagccag cgcctcgaac ttgttggccg ccgacgtgaa gggaaggttg gtgagctgcg
     4921 cgaccttggc ggcgaacgca tcggcgaatt ttgcatgggc gttcagcccg gtgccgaccg
     4981 cggtgccgcc ctgggccagc gcatacagcc cgggcagggt ggcctcgatg cgcgtcatgg
     5041 ccagctctac ctgcgccgcg tagccggaaa actcctgacc gagcgtgacc ggcgtcgcat
     5101 cctggagatg cgtgcggccg atcttgacga tgtcgacgaa tttcttggcc ttgtcgtcga
     5161 gcgcgcgatg cagatgacgc aacgccggca agaggcgctc gctgatctcg cgcgctgccg
     5221 cgatatgcat ggccgtcggg aacgagtcgt tcgacgactg gccgcgattg acgtggtcgt
     5281 tcgggtgcac cggcgacttg ccgccgcgct tgccgccgag ccgctcgttg gcgaggctcg
     5341 cgatgacctc gttggcgttc atgttcgatt gcgtgccgga cccggtctgc cacacgacga
     5401 ggggaaactc gtcgtcatat ttgccctgca cgacctcggc ggcggcgctc gcgacggcgt
     5461 cggcgacccg cggctcgagc tcgcccagat ccttgttcac cagtgcggcc gcctgcttca
     5521 cgaggccgag cgcgcgcacc agggggatgg gcatgcgctc gccgccgatg cggaaattca
     5581 tcagcgagcg ctgcgtctgg gcgccccaat agcgatcggc cgggacctcg atcggtccga
     5641 aggtgtcggt ttcggtgcgc gtggcggcct gcgtggcggc ttcggctcgg gcgggggatg
     5701 gcgacattgt tgcctcttct gaactgggag cggcaccatt taagacaagt cggcgaaagg
     5761 tgcgaccccg gcgagcgatg caaagcgaga ttgccaggcc tcttttccgg cccccggccc
     5821 cagagccgct gcgcgagccg ctcggcctcg tccaatacct gcgtcagttg cgcgcaaacc
     5881 cgctcgccac ctggacgcgg gagcatttcg agaagccgat cgtggcggcg gaaagcgcgc
     5941 tgggccgcat caccgtcgtc agcgcccccg aggcgatccg ctacgtcctc gtcgacaatg
     6001 caggcaacta ccgcaaggac gacctgcagc ggcgcatcct ggcgccggcg ctcggcaacg
     6061 gcctcgtgac ggccgaaggc gaggaatgga ggctgcagcg gcgcacgctg gcgccgctct
     6121 tcgcggcccg gcacgtgacc ggcttctttc cggccatggc gcgggccggc gagcgggtcg
     6181 tgcagcgctg gcgccggcac cagggccggg tcatcgacgt gtcgctcgag atgacgcgcg
     6241 tgacgctcga cgtgctcgag cagacggtgt tcacgcatgg ggtgcggcgc gaccccgacg
     6301 ctctgggccg cgccatcacc cgttatttcg aggcgctcgg cccggtcgat cccct
//
LOCUS       DATAIQ010000407         1928 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_21571, whole genome shotgun sequence.
ACCESSION   DATAIQ010000407 DATAIQ010000000
VERSION     DATAIQ010000407.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1928)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1928)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1928
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21571"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..625)
                     /locus_tag="VHN20_06800"
     CDS             complement(<1..625)
                     /locus_tag="VHN20_06800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725511.1"
                     /translation="MLSAAGFSANAQTATPASAGGDGSCGAVCRFFSGQWAPHAPPAA
                     AQAQPEAAEPPRPRRSRAASAGSKQQSAVRRELASARARTRAAIAAGDVEQTSSVSRD
                     QSASGARKSGELVLAAGPDDAHAAIAADLAAVVSPEIRLRTTPAKALPLKEVLSGGGA
                     DLAIASTLAVARGSAIADKVVYVSKLFTEELHAVAPPGVRRLDELQGK"
     gene            complement(770..1219)
                     /locus_tag="VHN20_06805"
     CDS             complement(770..1219)
                     /locus_tag="VHN20_06805"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HEX2725512.1"
                     /translation="MDDNKRISPRLRSFLKGRVIYNGGQTNLECLIRDISSTGARLEF
                     SSSVTLPDRFDLYLPHREETCKAHIQWRRGEEIGVAFDSIESAAPPSPAPPAAPAPVQ
                     DVAARVQQLEAEAGLTRMLLTQMRAELDSLKAEIGLVARANGTKGAA"
     gene            complement(1382..1864)
                     /locus_tag="VHN20_06810"
     CDS             complement(1382..1864)
                     /locus_tag="VHN20_06810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725513.1"
                     /translation="MSAHAVGVTYRWVAILMTVVAALGWGVLFVLSPSAASVHDAQRQ
                     EIDRLVQERQRLDAIVKEQRATTVELSELTTKLATTRDDLARMKEAHDAAQAALVAKK
                     AEFTSTQAAIATARTELAALEQRVTSSREQVSERTGTVKAGKSQRRKASLRRKKRARS
                     "
BASE COUNT          291 a          643 c          675 g          319 t
ORIGIN      
        1 gcttgccctg gagttcgtcc agccggcgca cgccgggagg ggcgacggcg tgcagctctt
       61 cggtgaacag cttgctgacg tagacgacct tgtccgcaat cgcggagccg cgtgccacgg
      121 ccagggtcga agcgatcgcc agatcggccc cgccgcccga gagcacctcc ttgagcggca
      181 acgccttggc gggcgtcgtg cgcagacgga tctcaggtga gacgaccgcc gccagatccg
      241 ccgcgatagc agcatgggca tcgtcggggc ccgccgccag gacgagctcg cccgatttgc
      301 gggctccgga cgcgctctgg tcgcgggaga cggatgaggt ctgctcgaca tcgccggcag
      361 cgatggcggc gcgggtgcgc gccctggcgg aggccagctc gcggcgcacg gcgctctgct
      421 gcttggaccc tgcggaggcc gcgcgcgagc ggcgcggacg cggcggctcg gccgcttccg
      481 gctgcgcctg ggcggcggcg ggaggcgcat gtggtgccca ttgcccggaa aagaaccggc
      541 atacggcgcc gcaggagccg tcgcctccag cggatgccgg tgtcgccgtc tgggcgttgg
      601 cagaaaaacc ggcggcgctc agcattgccg ccgctatcag gaagcggaag cccgctctca
      661 tacgatcacc ccaagaatcc cgtgaggcag ccgcaccggg cgaccgcgag ggacgcttag
      721 ggtcgaatag cgtcgagaat ctgtcgagga gacgacaggg ttttggcagc tacgccgcgc
      781 ctttggtccc gttcgcccgg gccacgaggc caatttcggc cttcaggctg tccagctcgg
      841 ccctcatctg cgtcagaagc atgcgcgtca gcccggcttc ggcctcgagc tgctgcaccc
      901 tggcggcgac gtcctgaacg ggcgccggtg cggcaggcgg cgccggagac ggtggcgcgg
      961 cgctttcgat cgagtcgaaa gcgaccccga tctcttcccc gcgccgccat tggatatgcg
     1021 ccttgcaggt ctcttcccgg tgcgggaggt acaggtcgaa gcggtcgggc agcgtgacgc
     1081 tggacgagaa ttccagccgt gcgccggtcg acgagatgtc ccggatcagg cactcgaggt
     1141 tggtctggcc gccattgtaa atgacgcgac ccttgaggaa gctgcgcagc cggggcgaga
     1201 tacgtttgtt atcgtccatg gtcccactcc aggggagtgg gtccgttcta cacggagcat
     1261 tttaagaaaa gctgaccgaa acggctcagt tttccgggta gccggacagc acgtggacgc
     1321 cccccaacct cctgctcgcg ttgcttagcg agcggttaac gcggggcggg ccgttaacct
     1381 gttatgaacg ggcgcgcttc ttgcggcgca gggacgcttt gcggcgttgc gacttgcccg
     1441 ccttgacggt gccggtgcgt tcggagacct gttcccggct cgatgtcacc ctctgctcga
     1501 gggcagcgag ctcggtccgg gcggtcgcga tggccgcctg cgtcgaggta aactccgcct
     1561 tcttggcaac gagagccgcc tgggcggcgt catgcgcctc tttcatccgg gcgagatcgt
     1621 cccgggtcgt ggcgagcttg gtcgtaagct cggagagctc caccgtcgtc gcgcgctgct
     1681 ccttgacgat cgcgtcaagg cgctgccgct cctgcaccag gcggtcgatc tcctgacgct
     1741 gggcgtcatg cacggacgca gccgacggcg acaggacgaa caggacgccc cagccgagcg
     1801 cggccacgac cgtcatcagg atcgccaccc agcggtaggt gacgccaaca gcgtgcgctg
     1861 acatgggacc cccttgctct tctttactta cctaggccgc cgcccgggcg ccatttgcga
     1921 gccgccct
//
LOCUS       DATAIQ010000408         1645 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_390563, whole genome shotgun sequence.
ACCESSION   DATAIQ010000408 DATAIQ010000000
VERSION     DATAIQ010000408.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1645)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1645)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1645
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_390563"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..518)
                     /locus_tag="VHN20_06815"
     CDS             complement(<1..518)
                     /locus_tag="VHN20_06815"
                     /inference="COORDINATES: protein motif:HMM:NF012703.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginase family protein"
                     /protein_id="HEX2725514.1"
                     /translation="MTPPCCIAIIGAPMDLGAGRRGVDMGPSALRLAGLDDRLTALGY
                     EVEDLGNVSVEQPESTPIGHERARYLPQIADVCGRLATMVGRAAREHKIPLVLGGDHS
                     VAVGTVAGLSHHYRQDGRTIGVIWVDAHPDMNTPATSPSGNVHGMPLACCIGHGPPEL
                     ASLFGYAPKVDPA"
     gene            complement(521..>1645)
                     /gene="asnS"
                     /locus_tag="VHN20_06820"
     CDS             complement(521..>1645)
                     /gene="asnS"
                     /locus_tag="VHN20_06820"
                     /EC_number="6.1.1.22"
                     /inference="COORDINATES: protein motif:HMM:NF003037.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004816 - asparagine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006421 - asparaginyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine--tRNA ligase"
                     /protein_id="HEX2725515.1"
                     /translation="LKALTQESSVVLSGRVREEPRAPGGFELDVTAAEIVQRVPESEP
                     YPITPKDHGIDFLMDRRHLWLRSRRQHAILRVRHEIVKAIRDFFDSHGFILVDTPIFT
                     PAACEGTTTLFEVDYFEDEKVYLTQSGQLYNEANAMAFGKVYCFGPTFRAEKSKTRRH
                     LTEFWMVEPEMAYATLDDVKRVAEELIVFVIGRVLENRCAELAVLERDVAKLEAIRAP
                     FPRISYDEAVERLRARGSQIEWGGDLGGTDETLITEDSHLPLMIDRYPTQVKAFYFQP
                     DEQRPEVALGVDVIAPEGYGEIIGGGQRIHDLDLLLRRIEEHHLPREAFDWYLDLRRF
                     GSVPHAGFGMGVERCVSWICGVEHVRETIPYPRMLYRTRP"
BASE COUNT          277 a          472 c          614 g          282 t
ORIGIN      
        1 gcgggatcca ccttgggcgc gtagccgaaa agggaggcta gctccggcgg tccgtgaccg
       61 atgcagcagg cgagcggcat gccgtgtacg ttgccgctgg gcgacgtcgc gggggtattc
      121 atatcgggat gggcatcgac ccagatgacc ccgatagtgc ggccgtcctg ccgatagtga
      181 tgcgagaggc cggcaacggt gccaacggcg accgagtggt ccccgccgag cacgagcggg
      241 attttgtgtt cgcgggcagc acgtccgacc atagtggcga gccggccgca gacgtcggca
      301 atttgcggca ggtagcgggc gcgctcgtgc ccaatgggcg tactctcggg ctgttcgaca
      361 gacacattgc cgaggtcctc gacttcatag ccgagcgcgg tgaggcgatc gtcgaggccg
      421 gcaagccgca gcgcggaggg tcccatgtcg acgccgcggc gtccggcgcc gaggtccatg
      481 ggcgcgccga tgatggcgat gcagcacggc ggcgtcaacg tcagggtctc gtccggtaga
      541 gcatgcgggg gtaggggatg gtttcgcgga cgtgttcgac gccgcagatc caggagacgc
      601 agcgttcgac gcccatgccg aagcccgcgt gcgggacgct gccgaagcgg cgaaggtcga
      661 gataccagtc gaaggcttcg cgcggcaggt ggtgctcttc gatgcggcga agaagcaggt
      721 cgaggtcatg gatgcgctgc ccgccgccaa tgatctcgcc gtagccttcg ggtgcgatga
      781 cgtcgacgcc gagcgcgacc tcgggccgct gctcatcggg ctggaagtag aaggctttga
      841 cctgcgtcgg gtagcggtcg atcatgagcg gcagatggga gtcttccgtg atgagcgtct
      901 catcggtacc gccgaggtcg ccgccccatt cgatctggct gccgcgagcg cggaggcgtt
      961 cgaccgcctc gtcgtagctg atgcgcggga agggcgcacg aatcgcctcg agtttggcga
     1021 catcgcgctc gaggacggcg agctcggcgc agcgattttc gaggacgcgg ccgatgacga
     1081 agacgatgag ctcttcggcg acgcgcttca catcatcgag cgtggcgtag gccatctcgg
     1141 gctctaccat ccagaactcg gtcaggtgac ggcgcgtctt cgatttctcg gctcggaagg
     1201 tgggaccgaa gcagtagacc ttgccgaacg ccatcgcatt ggcttcgttg tagagctgcc
     1261 cggattgagt gaggtagacc ttctcgtcct cgaagtaatc gacctcgaag agcgtagtgg
     1321 tgccttcgca ggcggcggga gtgaagatgg gcgtatcgac gaggatgaag ccgtgtgagt
     1381 cgaagaaatc gcggatggcc ttgacgatct cgtgccggac gcgcaggatg gcgtgctggc
     1441 ggcggctgcg cagccagagg tgtcgccggt ccatgaggaa atcgatgccg tggtccttgg
     1501 gcgtgatcgg gtacggttcc gattcgggaa cgcgctgcac gatctcggcg gcggtgacgt
     1561 cgagctcgaa gccgccgggg gcgcgcggct cctcgcggac gcgcccggag agcacaacgg
     1621 agctttcctg ggtgagggct ttgag
//
LOCUS       DATAIQ010000409         3316 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_21605, whole genome shotgun sequence.
ACCESSION   DATAIQ010000409 DATAIQ010000000
VERSION     DATAIQ010000409.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3316)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3316)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3316
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21605"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            239..1675
                     /locus_tag="VHN20_06825"
     CDS             239..1675
                     /locus_tag="VHN20_06825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725516.1"
                     /translation="MREALGDLTVLPAPANVVDLVARLDQEGVPYESGPLATIISDAR
                     VADLEPTILTVWEDNEMNDDTFFVSIPMANSNNPHRARPLGPRVLGLLFGGGLTIGTL
                     LICWNALVSADLLTGRPAAPPADLSELASPTALPPVGHDASGVAQTALEPAAPAEEPA
                     QPAEALAAAAPIAVASPELSPKSEALAEASESRADTTLAQLAHVLADSAPVALPEPVL
                     TPAPPSSADQAPSPQSALREGAETQVANAVITPEPAPLPEAHSIAVTAQPPVAAAPLA
                     SNTSVSASPPAVQPEALEQPPLEPIAAATEAPVQPTETPVHANVVQTGATESLPAATT
                     PEPEFTSLSGRAAAVVARRDLPTSRHVSAAPQRTSAPAKPRARAKPSLRVPFAGAWAT
                     SSEACTPQGQGEGHLVTHITTRRARAGDTSCTFRKIRRNGGVWDVAAMCSDGETRWTS
                     DVKLAVSRNTLTWTSHKGTTNYVRCRRG"
     gene            1828..2706
                     /locus_tag="VHN20_06830"
     CDS             1828..2706
                     /locus_tag="VHN20_06830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007592417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725517.1"
                     /translation="MKLHTLLGDYPVTKALKDGAIRSPEVTLDFADVKVPSSAFKRVV
                     RDLEFDVAELALVTYLIAKAHHKPLVLLPVVVLGRFQHPYLIYNADRGPLAPGDLTGR
                     RVGIRSYSVTTVTWIKGILGDDHGVDLDSVTWVTFEEPHVAEFKDPPNVARAPDGKTM
                     LDMLIAGEIDAAVVGGAITDPRLEPLIPDPAAAAQAWHRKTGALQVNHMVTVKDSIAK
                     DHPDIVREIFRLLHDSKQAAGLPRPGEVDTNPFGFEANRRNLEIGIDFAFRQRLIPRR
                     FAVEELFDDLTRTLNA"
     gene            2775..>3316
                     /locus_tag="VHN20_06835"
     CDS             2775..>3316
                     /locus_tag="VHN20_06835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003572154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoglutarate-dependent dioxygenase AlkB"
                     /protein_id="HEX2725518.1"
                     /translation="MPPRQLSFLETDAPPPPGFRYQADLLSPDEERELAEQFADLPFR
                     AFEFHGYLGKRRVLSFGWLYDFNTSELREAEPMPAFLAPVRQRAAAFAGLAPSALQQV
                     LLTEYAPGAGIGWHKDKAVFGDVVGISLLSACAFRFRRKARGTWERASFVAEPRSTYL
                     LQGAARTEWEHSIPAVDSLR"
BASE COUNT          546 a         1199 c         1064 g          507 t
ORIGIN      
        1 accttcgcgc gcctgacatc ggcccccctt cgatgtgccg cccccggccg ggccatggtt
       61 aaccaatcat taactccccc cggacgagac tgtcccagcc ttccagactc aggccgtgcg
      121 ggaagaggtg caccccgggc cggcccaatt cgcccgaggt gggacttcgt aaatgagcta
      181 cagcaatcgg gccgtcgccc ccgccgcccc cgaagaggca tcccccgaca atgccggaat
      241 gcgcgaggcg ctcggcgatc tcacggtcct cccggctccg gcgaatgtcg tcgatctggt
      301 cgcgcgcctc gaccaggagg gcgtgcctta tgaatccggc cctctcgcca cgatcatttc
      361 ggatgcgcgg gtcgcggatc tcgagccgac gattctgacg gtctgggaag acaacgagat
      421 gaacgacgac acgtttttcg tgtcgattcc catggccaac agcaacaatc cgcaccgggc
      481 ccgtccgctc ggaccacggg tgctcgggct gctgttcgga ggtgggctca ccatcggcac
      541 tttgctcatc tgctggaacg cgctggtaag cgccgatctt ctgaccggcc gccctgcagc
      601 gccaccggcg gacttgtcgg agttggcgag cccgaccgcg cttccgcccg tcggccatga
      661 cgcgtctggc gtcgcccaga ccgctttgga accggccgcc cctgctgagg aaccagctca
      721 gcccgccgag gccctcgccg cggccgcgcc aatagctgtg gcctcgcccg aattgagccc
      781 caagtcggaa gccctggccg aggcgtcgga gagccgcgcc gacacgacgc tagcgcaact
      841 ggcgcacgtc cttgccgata gcgccccggt cgcgcttccg gagcccgtgc tcacgccggc
      901 gcctccgtcg agcgccgatc aggcgccctc gccgcaatcc gcgctgcgtg agggtgcgga
      961 gacgcaggtc gcgaacgccg tgattacgcc cgagccagca ccgctgccag aggcacattc
     1021 catcgcggtg accgcacagc cacccgtcgc ggcggcgccg ctcgcgtcca acacgagcgt
     1081 ctcggcaagc ccgcctgccg tccagcctga ggcgctcgag caaccgccgc tcgagccgat
     1141 tgccgcggcg actgaggccc cggtccagcc aaccgagaca ccggtgcatg cgaacgtcgt
     1201 ccagacgggc gcaaccgagt cgctgccggc tgccaccacg ccggaacccg aattcaccag
     1261 cctgtcgggc cgcgctgccg ccgttgtggc gcggcgcgac ctgccgacga gccggcacgt
     1321 gagcgcagcc ccgcagcgga cgagcgcgcc ggccaaaccc cgtgcgcgag caaagccctc
     1381 attgagggtg ccgttcgccg gcgcatgggc cacgagctcc gaagcctgca cgccgcaagg
     1441 ccagggggag ggtcatctgg tcactcacat cacgacgcgc cgggcgcgcg ccggcgacac
     1501 cagctgcaca ttccggaaga tccggcgcaa cggcggcgtc tgggacgtgg cggcgatgtg
     1561 ctccgacggg gagacgcgat ggacctccga tgtcaagctc gcggtatccc gcaacaccct
     1621 gacctggaca agccacaagg gcaccacgaa ctacgtgcgc tgccgccgcg ggtaggggcg
     1681 cagctgccgc gccccgcccg agccgagcaa cccgtccccc tcgcttggcg aggggaccag
     1741 gtcggcgccc tgcatcctcg acaaaacgcg agaacggctc ttttatgccg gcgccccttg
     1801 gttctccaga gcgcacgcgt cggtctcatg aaattgcata ccctcctcgg cgactacccg
     1861 gtgacaaaag cgttgaagga cggagcgatc cggtcaccgg aggtgacctt ggacttcgcc
     1921 gacgtcaaag tgccaagctc cgccttcaag cgcgtcgtgc gcgatctcga gttcgacgtc
     1981 gccgaactcg cgctcgtgac ctacctgatc gccaaggcac accataaacc gctggtgctt
     2041 ctgccggtcg tcgtgctcgg ccgcttccag catccgtatc tgatctacaa cgccgatcgc
     2101 gggccgctcg caccggggga cctgacgggc cgccgcgtcg gcatccgctc gtattcggtg
     2161 acgacggtga cgtggatcaa gggaatcttg ggcgacgatc acggcgtcga tctcgacagc
     2221 gtgacctggg tcacgttcga ggaaccgcac gtggcggagt tcaaggatcc tccgaatgtc
     2281 gcacgcgcgc ctgacggcaa gacgatgctc gacatgctga tcgccggcga gatcgatgcg
     2341 gcggtggtcg gcggagcgat caccgatccg cgcctcgagc cgctcatccc cgatcctgca
     2401 gctgcggcgc aggcgtggca tcgcaagacc ggcgccctgc aggtcaacca catggtgacc
     2461 gtgaaggaca gcatcgccaa ggatcatccg gatatcgtgc gggagatctt ccggcttctg
     2521 cacgacagta agcaggcggc ggggctccca cggccgggcg aggtcgacac gaacccgttc
     2581 gggttcgaag caaaccggcg caacctcgag atcggcatcg acttcgcatt ccggcagcgc
     2641 ctgatcccgc gccgcttcgc ggtcgaggaa ttgttcgacg atctcacgcg cacgctcaac
     2701 gcgtgacgcg gcagcgcaga acgacgcatc tgcaccgcgg tcgtccgccg gccgcacaag
     2761 tgaccggagc atgcatgccg cctcgccaac tcagctttct ggaaaccgat gcgccgccgc
     2821 ctcctggctt cagatatcag gctgatctgc tctctcccga cgaggaacgg gagctggccg
     2881 agcagttcgc ggatctgccg ttccgcgcct tcgagttcca cggctatctc gggaagcgcc
     2941 gcgtgctgtc gttcggctgg ctgtatgatt tcaacaccag cgagttgcgc gaggccgagc
     3001 ccatgccggc gttcctggcg ccggtacgcc agcgcgccgc cgccttcgcc ggcctggctc
     3061 cgtcggcgct gcaacaggtc ctgctcaccg agtatgcgcc tggcgccggc atcggctggc
     3121 acaaggacaa ggccgtgttc ggcgacgtcg tcggcatctc gctgctctcg gcctgcgcgt
     3181 tccgcttccg gcgcaaggcg cgcggcacct gggagcgcgc gtcctttgtc gccgagccgc
     3241 gctcaaccta cctgctgcag ggggctgcgc gaacggagtg ggagcacagc atcccggcgg
     3301 tcgacagcct gcgcta
//
LOCUS       DATAIQ010000410         1569 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_240724, whole genome shotgun sequence.
ACCESSION   DATAIQ010000410 DATAIQ010000000
VERSION     DATAIQ010000410.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1569)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1569)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1569
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_240724"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(137..586)
                     /locus_tag="VHN20_06840"
                     /pseudo
     CDS             complement(137..586)
                     /locus_tag="VHN20_06840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015821825.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2778 domain-containing protein"
     gene            complement(1242..1424)
                     /locus_tag="VHN20_06845"
     CDS             complement(1242..1424)
                     /locus_tag="VHN20_06845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725519.1"
                     /translation="MQAQGARYGTARAVPATALAEVTLVAWPEHHASALHNFTTELKN
                     AAEQKFSLSGVNHSAG"
BASE COUNT          256 a          520 c          549 g          244 t
ORIGIN      
        1 ggaggccgcg gcggacggtc ggcaagaagc tcagatgggg tcggggcctc tcgatagcga
       61 gggttggttc caagtcaatt gcggcttggc agtgggcatt caactttccc ggctgccgac
      121 cgccgactgc cggtgctcag ccgtcgtgcg cggatgattc ggaccgccca ggtgtggcga
      181 cacgctcctt gccgagaggc ggcccgtcct ttccgcgtcc cgcaacgacg acgagccgct
      241 tcacctcgcc cttcaggtaa gcctgaagga acctggcata gtccttgaac accaagcagc
      301 cgttcgaatc gcctctcggc ccaagcatat aggtgtgggc gagcaggccg gcgcggccgt
      361 ggacggcagc gctgccgccg acggggttga gccgcaaggc gcgcacgccg tgaaacggcc
      421 tttcgcgttc cttgaggtcg tagatgccgg gcggcgtcgc cccacgcatg cgcacatgca
      481 cgaagcgcgg gtcatcgagc ttctcccgca ggccggaatg tgcctccagc ttttcgccgt
      541 tcggcatgta aaccgtgcgc gcgctgatgt catagaccgc aactccccgg ccgggggccg
      601 gatcggagcg gatgcccggc ggcgcgggca gcgcgaccgg cggctccagt gccgcgtagc
      661 cgagcgcagc gtcaggcacg gggttcgacg gggacgagct tggcgccgcc tcgatcgacc
      721 gagccatctg ctgggccgcc gataagcttg gcgccgcctc gatggattga gtcgtgtcct
      781 cggccgtcgc ggacaggccg ggctcggcct gctccggttc cggcagcttg agcgcctcga
      841 cgcccgcttc gggtcccccg ctggccgaca tggatgtccc cggcggcgga gccacggacg
      901 cggtctcgag cggcgtgggc gcgggcgtgg gctcgtccgg cagccagtcg aagaccctgc
      961 gcttgagggt gacggcagcc tgttgggacg aaacggcgcc ggacgaacgg ctcagcgata
     1021 cgctttgcga tgcatcgccg cgaagcggaa gcgccgccca ggcgaggaag cccgccgtgc
     1081 caacgacgaa tgaagcggca gccaagaaga tgttgcgcgc atatcggggc cgagcgcggc
     1141 catcgggcgg attctgcagc ctgcagggcg cagctacgcg atcgtccatc tccacgtccc
     1201 ggcccagctt cgtgcccgcc ccaaacccgc gcgccaggaa atcatccggc cgagtgattg
     1261 acgccgctta aagaaaattt ctgctcagcg gcattcttca gttctgtggt gaaattgtgg
     1321 agcgcggaag cgtgatgctc cggccacgcg accagcgtca cttcggcgag cgcggttgcc
     1381 ggcacggcac gtgccgtacc atagcgggcc ccttgggctt gcatcgccgc cgctcgtggt
     1441 aagctcaaac gcggaagcgc agagtttcaa gagggactgc gatgaatctc agccggcgca
     1501 aactgctcgg gaccgcagcc gccgtcgcgg ctgcaatgct gcccaaagca gggcacgcgg
     1561 aggcgatcg
//
LOCUS       DATAIQ010000411         3460 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_21638, whole genome shotgun sequence.
ACCESSION   DATAIQ010000411 DATAIQ010000000
VERSION     DATAIQ010000411.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3460)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3460)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3460
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21638"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            53..361
                     /gene="rpsJ"
                     /locus_tag="VHN20_06850"
     CDS             53..361
                     /gene="rpsJ"
                     /locus_tag="VHN20_06850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005773267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HEX2725520.1"
                     /translation="MNGQNIRIRLKAFDHRILDASTREIVSTAKRTGAQVRGPIPLPT
                     RLERFTVLRSPHIDKKSREQFEMRTHKRVLDIVDPTPQTVDALMKLDLAAGVDVEIKL
                     "
     gene            408..1136
                     /gene="rplC"
                     /locus_tag="VHN20_06855"
     CDS             408..1136
                     /gene="rplC"
                     /locus_tag="VHN20_06855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HEX2725521.1"
                     /translation="MRSGVIAQKLGMTRIFTDAGEHVPVTVLKVDNCQVVAHRTKDKN
                     GYTALQVGVGRAKVKNVSRAERGRFAVAKVEPKKKLAEFRVSDDAVIPVGAEITADHF
                     VAGQFVDVTGITTGKGFAGGMKRWNFGGLRATHGVSISHRSIGGTGGRQDPGKTFKNK
                     KMPGHLGVERVTTQNLRVVQTDVERGLILVEGAVPGVAGGWIHVRDSVKRKLPANVPM
                     PGKFREPANDGGPAAAEAAPEENA"
     gene            1136..1756
                     /gene="rplD"
                     /locus_tag="VHN20_06860"
     CDS             1136..1756
                     /gene="rplD"
                     /locus_tag="VHN20_06860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012330341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HEX2725522.1"
                     /translation="MKIEITTLDGGKAGSLDLNEAIFGLEPRADLLQRCVRWQLAKRQ
                     AGTHAVKNRSDVSRTTKKLYRQKGTGNARHGAASAPQFRGGGRAFGPQVRSHAHDLPK
                     KVRALALKHALSAKAKDASLIIVDDVKLNEPKTKSLRDTFGKLGVASALIIAGSEVDA
                     NFGRAARNIPNIDVLPVQGINVYDILRRDKLVLSRAALDALEARFK"
     gene            1753..2049
                     /locus_tag="VHN20_06865"
     CDS             1753..2049
                     /locus_tag="VHN20_06865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012454028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HEX2725523.1"
                     /translation="MSLDPRHYDVILSPVITEKATARSEHNQVVFRVRKDATKPQIKE
                     AVERLFDVKVKSVNTLVTKGKVKLFRGTRGQRSDVKKAIVTLVEGQTIDVTTGL"
     gene            2070..2912
                     /gene="rplB"
                     /locus_tag="VHN20_06870"
     CDS             2070..2912
                     /gene="rplB"
                     /locus_tag="VHN20_06870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012589619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HEX2725524.1"
                     /translation="MALKTFKPVTPGLRQLVIVDRGELYKGKPVKALTEGKIGSGGRN
                     NLGRVTVRFRGGGHKQAYRYIDFKRRDHLGVPAKVERIEYDPNRTAFIALVTYRDGEQ
                     SYILAPQRLAAGDEVVSGEQVDIKPGNAMPIGNMPVGTIVHNIELKIGRGGALARSAG
                     TYAQIVGRDQGYVTLRLNSGEQRLVHGQCFATVGAVSNPDHMNISIGKAGRNRWLGKR
                     PHNRGVSMNPIDHPHGGGEGRTSGGRHPVTPWGKPTKGAKTRANKRTDKFIVSSRHAR
                     KKKG"
     gene            2920..3201
                     /gene="rpsS"
                     /locus_tag="VHN20_06875"
     CDS             2920..3201
                     /gene="rpsS"
                     /locus_tag="VHN20_06875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012384355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HEX2725525.1"
                     /translation="MARSIWKGPFVDGYLLKKAEAARGSGRNEVIKMWSRRSTILPQF
                     VGLTFGVHNGHKHIPVYVTEEMVGHKFGEFSPTRTFHGHAADKKAKRTK"
     gene            3203..>3460
                     /locus_tag="VHN20_06880"
     CDS             3203..>3460
                     /locus_tag="VHN20_06880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003597100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0042255 - ribosome assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uL22 family ribosomal protein"
                     /protein_id="HEX2725526.1"
                     /translation="MGKPAMSRALPENEAKAVARMLRVSPQKLNLVAQLIRGKKVATA
                     LADLEFSRKRIARDVRKCLESAIANAENNHNLDVDDLVVEEA"
BASE COUNT          672 a         1169 c         1126 g          493 t
ORIGIN      
        1 cggcgcggct gcgatcagcc ggccgcgtcc tttctcttga acgggtcaac ccatgaacgg
       61 tcagaacatc cgcattcgcc tcaaggcgtt cgatcacagg attctggacg cctcgacgcg
      121 ggaaatcgtg tcgacggcga agcggacggg cgctcaggtg cgtgggccca ttccgctgcc
      181 gacgcgcctg gagcgcttca cggtgctgcg ctcgccgcac atcgacaaga agtcgcgcga
      241 gcaatttgag atgcgcacgc acaagcgtgt gctcgatatc gtcgatccga cgccgcagac
      301 ggtggacgcg ctgatgaagc tcgacctcgc cgccggcgtg gacgtggaaa tcaagctctg
      361 agcttcgagg ctcggagcat cagaggcacg cctcagagga taagcacatg cgctcaggcg
      421 tcattgcaca gaagctcggg atgacccgca tcttcaccga tgcgggcgag cacgtcccgg
      481 tgacggtcct gaaggtcgac aactgccagg tcgtcgccca tcggacgaag gacaagaacg
      541 gttacacggc gctgcaggtc ggcgtcggcc gggccaaggt gaagaacgtc tcgcgcgccg
      601 agcgcggtcg cttcgccgtg gccaaggtcg agccgaagaa gaagctcgcc gagttccgcg
      661 tctccgacga tgcggtgatc ccggtcggcg ccgagatcac ggccgatcac ttcgtggccg
      721 gccaattcgt cgacgtgacc ggcatcacga ccggtaaggg ttttgccggc ggcatgaagc
      781 gctggaactt cggcggtctg cgcgcgacgc acggcgtctc gatctcgcac cgctcgatcg
      841 gcggcacggg cggccgccag gacccgggca agaccttcaa gaacaagaag atgcccggac
      901 atctcggcgt cgagcgtgtc accacgcaga acctgcgggt cgtgcagacc gacgtcgagc
      961 gcgggctgat cctcgtcgag ggcgccgttc cgggcgtcgc cggcggctgg atccatgtcc
     1021 gtgactcggt caagcgcaag cttcccgcca acgtgccgat gcccggcaaa ttccgtgagc
     1081 cggccaacga cggcggccct gcggcggccg aggcggctcc tgaggagaac gcgtgatgaa
     1141 aatcgagatc accacgctcg acggcggcaa ggccggctcg ctcgacctga acgaggcgat
     1201 cttcggcctc gagccgcgcg ccgaccttct gcagcgctgc gtgcgctggc agctggccaa
     1261 gcgccaggcg ggcacccatg cggtcaagaa ccgctcggac gtcagccgca cgaccaagaa
     1321 gctgtatcgg cagaagggca ccggcaacgc ccgtcacggc gccgccagcg cgccgcaatt
     1381 ccgcggcggc ggccgcgcct tcggcccgca ggtgcgcagc cacgcgcatg acctgcccaa
     1441 gaaggtgcgt gcgctcgccc tcaagcatgc gctctcggcc aaggccaagg acgcttcgct
     1501 gatcatcgtc gacgacgtga agctcaacga gcccaagacc aagtcgctgc gcgacacgtt
     1561 cggcaagctc ggcgtggcca gcgccctgat catcgcaggc agcgaggtcg acgccaattt
     1621 cggccgcgcc gcgcgcaaca tccccaacat cgacgtcctg ccggtgcagg gcatcaacgt
     1681 ctacgacatt cttcgccgcg acaagctcgt gctgtcgcgc gcggccctcg atgcgctgga
     1741 ggcgcgcttc aaatgagtct cgatccgcgc cattacgacg tcatcctgag cccggtgatc
     1801 accgagaagg cgactgcccg gtccgagcat aaccaagtcg tgttccgggt gcgcaaggac
     1861 gccaccaagc cgcagatcaa ggaagcggtc gagcggctgt tcgacgtcaa ggtgaagagc
     1921 gtcaacacgc tcgtgaccaa gggcaaggtc aagttgttcc gcggcacgcg tggccagcgg
     1981 tccgatgtca agaaagcgat cgtgacgctg gtcgaaggcc agacgatcga cgtcaccacg
     2041 ggtctgtgag cgggtaaggg gtcgaaccga tggctttgaa aacattcaaa ccggtcacac
     2101 ctggcctgcg tcagctggtg atcgtcgacc gcggcgagct ctacaagggc aagccggtca
     2161 aggcgctgac cgagggcaag atcggctccg gcgggcgcaa caatctcggc cgcgtcaccg
     2221 tccgtttccg cggcggcggc cacaagcagg cgtaccgcta tatcgacttc aagcgccgcg
     2281 accacctcgg cgtgccggcg aaggtcgagc ggatcgaata cgatccgaac cgcaccgcct
     2341 tcatcgcact cgtcacgtat cgcgacggcg agcagtcgta catcctggcg ccgcagcgcc
     2401 tggccgccgg cgacgaggtc gtgtccggcg agcaggtcga catcaagccg ggcaacgcca
     2461 tgccgatcgg caacatgccg gtgggcacga tcgtgcacaa catcgagctc aagatcggcc
     2521 gcggcggcgc cctcgcgcgc tccgccggca cgtatgccca gatcgtcggc cgcgaccagg
     2581 gctacgtgac gctgcgcctg aactcgggcg agcagcgcct cgtgcatggc cagtgcttcg
     2641 caacggttgg cgccgtgtcg aacccggacc atatgaacat ctcgatcggc aaggccggcc
     2701 gcaaccgctg gctcggcaag cgcccgcata accgcggcgt gtcgatgaac ccgatcgacc
     2761 atccgcacgg cggcggcgaa ggccgcacct ccggcggccg ccacccggtg acgccgtggg
     2821 gcaagccgac gaagggcgcc aagacccgcg ccaacaagcg gaccgacaaa ttcattgtgt
     2881 cgagccggca cgctcgcaag aagaagggct gatccagcca tggcacgttc gatctggaaa
     2941 gggccgttcg tcgacggcta cctgctgaag aaggccgagg ccgcgcgcgg ctccggccgc
     3001 aacgaggtga tcaagatgtg gagccgccgc tccaccatcc tgccgcagtt cgtcggcctc
     3061 accttcggcg ttcacaacgg ccacaagcac atcccggtct acgtgaccga ggagatggtc
     3121 ggccacaagt tcggcgagtt ctcgccgacg cgtacgttcc acggccacgc tgccgacaag
     3181 aaggcgaaga ggaccaagta acatgggtaa gcctgccatg tcccgcgcgc tgcccgagaa
     3241 cgaggccaag gccgtcgctc gcatgctgcg cgtcagcccg cagaagctca acctcgtcgc
     3301 gcagctgatc cgcggcaaga aggtcgcgac cgcgctcgcc gacctcgagt tctcgaggaa
     3361 gcgcatcgcc cgcgacgtgc gcaaatgcct cgagagcgcc atcgccaacg ccgagaacaa
     3421 ccacaatctc gacgtagacg atctcgtggt cgaagaagct
//
LOCUS       DATAIQ010000412         2361 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_390645, whole genome shotgun sequence.
ACCESSION   DATAIQ010000412 DATAIQ010000000
VERSION     DATAIQ010000412.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2361)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2361)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2361
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_390645"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1219)
                     /locus_tag="VHN20_06885"
     CDS             complement(<1..1219)
                     /locus_tag="VHN20_06885"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEX2725527.1"
                     /translation="MTRIAIGDPIGRFEDLRLVRGGGRYVDDIVLPSMLFGFVLRSHH
                     AHAAIRSIDTSAARAAPGVRAVLTGEDWQQSGFGDLPVPGGFKRRDGSPMYRPPFPAL
                     VRDRVRWVGDYVAFVVADTYHQAADAAELIEVDYEPLPAATSTAEALEPGAPLVWDDC
                     PNNVCFTHLDGDKARVDAAFAAADHVVRHSFVINRVTAATMEPRGCIGDYNTVEDRYT
                     IYTTLQRAHNFRSELAGAVLKLPEHKVRVVAGDIGGSFGMKSPVYNEVALVLLASKLT
                     GRPVKWTSTRSEAFLSDAQGRDNVTDVELALDKDGTFLAMRVKNIVNLGAYLQTGGQS
                     SATGNLGTLAGVYRTPAIHVDVTTVFSHTNPMRPYRGNGRPEAAFVIERIIDLAADQL
                     GIDRVEIRRRNLIP"
     gene            1488..>2361
                     /locus_tag="VHN20_06890"
     CDS             1488..>2361
                     /locus_tag="VHN20_06890"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEX2725528.1"
                     /translation="MGFIFQLAARGLALAGALLVCAGPLQAQAPETFFAGKTITIVVG
                     FEAGGGYDAYARMLARHMGRHAGGANIVVQNRPGAGSLVAANYLFSVAPRDGTVFGII
                     SSGVLFDPLFGNKAAQFEATGFSWLGSVNREVSTCQIWHTAPIKSFEEARTTSIAVGG
                     TGAGADSHLFPQTLNAVLDTKFKIVSGYPGATSVFLAMERGELQGICGIYWSTLKAQR
                     ADWLRQGILRPLVQLALEKHPEYPDVPLILDFARNPEERAALELVFAPMALARPFLGP
                     PGIPADRLAFLRRAF"
BASE COUNT          359 a          805 c          820 g          377 t
ORIGIN      
        1 gcgggatcag attgcgccgg cggatctcga cgcggtcgat gccgagctgg tcggcggcaa
       61 ggtcgatgat gcgctcgatc acgaaggccg cctcggggcg gccgttgccg cgatacgggc
      121 gcatcgggtt ggtgtgcgag aacaccgtgg tcacgtcgac gtggatggcc ggcgtgcgat
      181 agacgcccgc gagcgtgccg agattgccgg tcgccgagct ttgcccgccg gtctgcaggt
      241 aggcgccgag attgacgatg ttcttcacgc gcatcgcgag gaacgtgccg tccttgtcga
      301 gcgcgagctc aacgtcggtg acgttgtcgc gtccctgggc gtccgacaga aaagcttccg
      361 agcgggtgct ggtccatttc accggccggc cggtgagctt cgaagccagc agcaccagcg
      421 cgacctcgtt gtagaccggc gacttcatgc cgaagctgcc gccgatgtcg ccggcgacga
      481 cgcgcacctt gtgctcgggc agcttgagca ccgcgcccgc gagctcgcta cggaaattat
      541 gggcgcgctg cagcgtcgtg tagatcgtgt agcggtcttc gacggtattg tagtcgccga
      601 tgcagccgcg cggctccatg gtcgcggcgg tgacgcggtt gatgacgaag gagtggcgca
      661 cgacgtggtc ggccgccgcg aaggcggcgt cgacgcgcgc cttgtcgccg tcgagatgcg
      721 tgaagcagac gttgttcggg cagtcgtccc acacgagcgg cgcgccgggc tcgagcgcct
      781 cggcggtcga ggtcgcggcc ggcagcggct cgtaatcgac ctcgatcagc tcggccgcgt
      841 ctgccgcctg gtgataagtg tcggcgacga cgaaggcgac gtaatcgccg acccagcgca
      901 cgcggtcccg gacgagcgcc ggaaacggcg ggcggtacat cggcgagccg tcgcgacgct
      961 tgaacccgcc cgggacgggc aggtcgccga agcccgattg ctgccagtcc tcgcccgtca
     1021 gcaccgcgcg cacgcccggc gccgcgcggg ccgcgctggt gtcgatcgag cggatcgccg
     1081 cgtgggcatg atgcgagcgc agcacgaagc cgaacagcat ggacggcagc acgatgtcgt
     1141 ccacgtagcg cccgccgccc ctgacgagac gcaggtcctc gaaacggccg atcggatcgc
     1201 cgatagcaat tctggtcatg tgctctttca ggagtgttgg aggagaaggg ccccggtgct
     1261 cgcgccgatg atcccggctg ttgcgtgatc gtgtgaacct cgtcggtcgc cgatctcaca
     1321 tgaccggccg gcgtcgtcaa tcgcgccagg aaagccatcg cgttccggca ccttgccaag
     1381 gaagcggggt cggctagaag acggccaaac aacgagctcg aagcgaccgg aaggcgagac
     1441 gtgcccccgg ccagagatcg ggctcggctt cggcgaggaa cgcatcgatg ggcttcatct
     1501 tccagcttgc cgcaaggggc ttggcccttg ccggcgccct cctggtctgc gccggccctt
     1561 tgcaggcgca ggcgccggaa accttcttcg ccggcaagac catcaccatc gtggtcggct
     1621 tcgaggccgg cggcggctat gacgcctacg cgcgcatgct cgcccgccac atgggccgcc
     1681 acgccggcgg cgccaacatc gtggtgcaga accggcccgg ggccggctcg ctggtcgccg
     1741 ccaactacct gttcagcgtc gcgccccgcg acggcacggt gttcggcatc atctcgtcgg
     1801 gcgtgctgtt cgacccgctg ttcggcaaca aggcggcgca gttcgaggcg accgggttct
     1861 cctggctcgg cagcgtcaac cgcgaggtct ccacctgcca gatctggcac accgcgccga
     1921 tcaaatcgtt cgaggaggcg cgcaccacgt cgatcgccgt cggcggcacc ggcgccggcg
     1981 ccgacagcca cctgttcccg cagaccctga acgccgtgct cgacaccaaa ttcaagatcg
     2041 tctccggcta tccgggcgcg acctcggtgt tcctcgccat ggaacgcggc gagttgcagg
     2101 gcatctgcgg catctactgg tcgacgctca aggcgcagcg cgccgactgg ttgcgccagg
     2161 gcatcctgcg gccgctcgtc cagctcgcgc tcgaaaagca cccggaatat ccggacgtgc
     2221 cgctgatcct cgatttcgcc aggaaccccg aggagcgcgc ggcgcttgag ctggtcttcg
     2281 cgccgatggc gctggcgcgc cccttcctcg gtccgccggg catcccggcg gaccggctcg
     2341 ccttcctgcg ccgtgccttc g
//
LOCUS       DATAIQ010000413         2213 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_194412, whole genome shotgun sequence.
ACCESSION   DATAIQ010000413 DATAIQ010000000
VERSION     DATAIQ010000413.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2213)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2213)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2213
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_194412"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..435
                     /locus_tag="VHN20_06895"
     CDS             <1..435
                     /locus_tag="VHN20_06895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008837332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEX2725529.1"
                     /translation="LDLALEVLLLTQEMRDTGQPPERVALSHARHMYWTPAQLVAHHT
                     SGGCNLRPGDLLGTGTVSGPGVDGCGSLLEATKGGREPVRLATVEERRFLEDGDEVIL
                     RARAVSRSGFAPIGFGECRGMIVGARSSPAPGGGAGAAKPTG"
     gene            582..1619
                     /locus_tag="VHN20_06900"
     CDS             582..1619
                     /locus_tag="VHN20_06900"
                     /EC_number="5.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016857 - racemase and epimerase activity,
                     acting on carbohydrates and derivatives [Evidence IEA];
                     GO_function: GO:0030246 - carbohydrate binding [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldose epimerase family protein"
                     /protein_id="HEX2725530.1"
                     /translation="MTARLFGELDGEPVYEVTIRSDNGTEAKVITWGAVIRDLIARAG
                     GKARRVVLGLETLDDYVRHSPYFGAIAGRYANRIAHGRFRFGEKMYQLTRNWKGEHSL
                     HGGARGFGKRPWQLAGYDASSVTLTLFSPDGDEGYPGDLTATCTYRLVGSTLCVELTA
                     AADAATPVNLAQHSHFNLDQSPSILDHTLQLAADFYTPTDADLIPTGEIRAVAGTPYD
                     FREVCPLRMTDPATAGPFHYDINFVLRRDRLTPSRREDVSLAHAATLASRASGVSLEV
                     WTDQPGLQVYDGWMTNVPVAGFDGARYGASSGICLEAQVFPDGPNRPHFPDAILRPGR
                     TYRQVTEYRFS"
     gene            complement(1660..>2213)
                     /locus_tag="VHN20_06905"
     CDS             complement(1660..>2213)
                     /locus_tag="VHN20_06905"
                     /inference="COORDINATES: protein motif:HMM:NF020893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="VTT domain-containing protein"
                     /protein_id="HEX2725531.1"
                     /translation="WAFIAFGLIYVFGTLLLAPGSVMSIAAGVAFGLWGVPLVLVFAT
                     TGAAAAFLIARYVARQTVEQALQGHPNFKAVGKAIDEEGWKVVGLLRLSPPVPFAITN
                     YFFGVTNVGFVPFVITTLLGIVPATLIYVNLGAMGHAAGTGQGNDALRWALLGVGLVA
                     TIVAAVLVTRKAKEKLRVGDTAS"
BASE COUNT          362 a          771 c          729 g          351 t
ORIGIN      
        1 ctcgacctcg cgctagaggt gctgctgctc acgcaggaaa tgcgcgacac gggccagcct
       61 cccgagcgtg tggcgctgtc gcatgcccgg catatgtact ggacgcccgc gcagctggtc
      121 gcgcatcaca ccagcggcgg ctgcaacctg aggccgggcg atctgctcgg cacgggcacg
      181 gtttcggggc cgggcgtcga tggttgcggc agcctgctcg aagcgacgaa gggcgggcgc
      241 gaacccgtgc gcctggcgac cgtcgaggaa cgccgctttc tcgaggacgg cgacgaggtg
      301 atcctgcgcg cccgcgccgt cagccgcagc ggcttcgcgc cgattggctt cggcgaatgc
      361 cggggcatga tcgtcggcgc acgctcgtct cccgcgccgg gaggaggggc gggggccgca
      421 aagcctaccg ggtgagggcg ctccccggcg ttcttttctg cggacggaag gtcgcaacat
      481 ccaacttgcg cgccgggaga aacgttgcgg ccacgctgga catatcgcgc cggacgtggt
      541 cagaggcggc cacccctgag cctcccacgc gccttcccat catgacagca cgtcttttcg
      601 gcgaactcga cggcgagccg gtctacgagg tcacgatccg ctccgacaac ggaacagaag
      661 ccaaggtgat cacgtggggc gcggtgatcc gtgacctgat cgcgcgtgcc ggcggcaagg
      721 cacggcgcgt cgtgctcggc cttgagacgc tcgacgacta cgtcaggcat tcgccgtatt
      781 tcggcgccat cgccgggcgc tacgccaacc gcatcgctca tggccgcttc cggttcggcg
      841 agaagatgta tcagctcaca cgcaactgga agggcgagca cagcctgcat ggcggcgccc
      901 gcggcttcgg caagcggccg tggcagctcg caggttacga tgcatcttcc gtcacgctca
      961 ccttgttctc gcccgacggc gacgagggct atcccggcga tctgacggcg acctgcacct
     1021 accggcttgt cgggtcgacg ctgtgcgtcg agctcacggc cgccgccgac gccgcgacgc
     1081 cggtcaatct cgcccagcat tcgcacttca acctcgacca gtcgccgtcg atcctcgatc
     1141 atacgttgca gctcgcggcg gatttttaca cgcccaccga tgccgacctg atcccgaccg
     1201 gcgagatccg cgcggtcgca ggcacgccct acgatttccg cgaggtgtgc ccgttgcgca
     1261 tgacggatcc cgccaccgcg gggccgttcc attacgatat caatttcgtg ctgcgccgcg
     1321 accgcctcac gccgtcgcgc cgcgaggacg tatcgcttgc gcatgcggcc accctggcgt
     1381 ccagggcgag cggcgtttcg ctcgaggtat ggacggacca gccgggcctt caggtctatg
     1441 acggctggat gaccaacgtg ccggtcgcgg gcttcgatgg tgcgcgttac ggcgccagtt
     1501 cgggcatctg cctcgaggcc caggtctttc ccgacggccc aaaccggccg catttccccg
     1561 acgccatctt gcgcccggga cgcacgtatc ggcaggtcac cgaataccgg ttcagctgac
     1621 caggcatggt tgttgcgcgc tcctggcgca cgccaattgt catgatgccg tatcacccac
     1681 gcgcagcttc tccttggcct tgcgcgtgac cagcacggcg gcgacgatcg tcgcgaccag
     1741 gccgacgccg aggagcgccc agcgcaacgc gtcgttgcct tgtcccgtgc cggccgcatg
     1801 tcccatggcg ccgagattga cgtagatcag cgtcgccgga acgattccga gcagcgtcgt
     1861 gatcacgaag ggcacgaagc cgacattggt cacgccgaaa aaatagttgg tgatcgcgaa
     1921 cggcaccggc gggctcaggc gcagcagccc gaccactttc cacccttcct cgtcgatggc
     1981 cttccccacc gccttgaagt tggggtggcc ctggagcgcc tgctcgacgg tctggcgcgc
     2041 cacgtagcgt gcgatcagga aggccgcggc ggcgccggtg gtcgcgaaaa cgagcaccag
     2101 cggcacgccc cacaggccga acgcgacgcc ggcggcgatc gacatcaccg agcccggcgc
     2161 aagcagcagg gtgccgaaaa cgtaaatcag cccgaaggcg atgaaggccc acg
//
LOCUS       DATAIQ010000414         1722 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_240768, whole genome shotgun sequence.
ACCESSION   DATAIQ010000414 DATAIQ010000000
VERSION     DATAIQ010000414.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1722)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1722)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1722
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_240768"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1467
                     /locus_tag="VHN20_06910"
     CDS             <1..1467
                     /locus_tag="VHN20_06910"
                     /inference="COORDINATES: protein motif:HMM:NF017745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF885 domain-containing protein"
                     /protein_id="HEX2725532.1"
                     /translation="ILLRSLEEWVEGNRFGQRMMLFTNRSGWHQSIADLADGLSFTSA
                     RDYDNYLKRLAAYPALNETAIAITNRAVAEGYTLPCAAMGGYETTITGVIPADATKSR
                     LYAPFTKPRPASVPAAEWTALQARAKALIEGPLRAAYGRHATWYRTSYAPKCNPNVGV
                     SAQPGGKAYYDYRVRTMTTTGMSADEIHKLGLSEVARIRAEMETVAKKAGFASREAFI
                     ADLRTNPKYYAKTPEELMEAVARETKKIDGMMPNLFGLLPRLPYGIREIPAEIAPGTT
                     TAYYSGGSPENGIAGTYYVNTSKLDQRPLWEVPALSVHEAVPGHHHQIALQQELPLPE
                     WRKHGTFFTAFVEGWGLYSERLGIEMGLYDTPAKDMGRLSYEMWRATRLVVDTGIHSK
                     GWSKKQALDFMKDNTALSEANIEAEVNRYISWPGQALAYKIGELRIRALRTRAEKELG
                     ARFDLRKFHDAVLGQGAVPLDVLERQVEEWIAATKAKA"
     gene            complement(1477..>1722)
                     /locus_tag="VHN20_06915"
     CDS             complement(1477..>1722)
                     /locus_tag="VHN20_06915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725533.1"
                     /translation="CARKPESERFRIPERLRQGGSLQSRQAWAVRAKSFETVGRTGIN
                     SCSPVGPGGFTGCVDQLIKQSFAERKEQMEGESAPRD"
BASE COUNT          311 a          608 c          559 g          244 t
ORIGIN      
        1 atcctgctgc gcagcctcga ggagtgggtc gaggggaacc gcttcggcca gcgcatgatg
       61 ctgttcacca accgctcggg ttggcaccag tcgatcgccg acctcgccga cggcctgtcg
      121 ttcacctcgg cccgcgacta cgacaattat ctgaagcgcc tcgccgccta tccggcgctc
      181 aacgagaccg cgatcgcgat caccaaccgc gccgtcgccg agggctacac cctgccgtgc
      241 gcggcgatgg ggggctacga gaccacgatc accggggtga tcccggccga cgccaccaag
      301 agccggctct acgcgccgtt caccaagccc aggccggcat cggtcccggc cgccgaatgg
      361 accgccctcc aggcgcgcgc caaggccctg atcgaggggc cgctacgcgc cgcctacggc
      421 cgccacgcga cctggtaccg gacgtcctac gcgcccaagt gcaaccccaa tgtcggggtg
      481 tcggcccagc ccgggggcaa ggcctattac gactatcgcg tgcgcaccat gaccaccacc
      541 ggcatgagcg ccgacgaaat ccacaagctc ggcctgagcg aggtcgctcg gatccgcgcc
      601 gagatggaga cggtggcgaa aaaggccggc ttcgccagcc gcgaggcgtt catcgccgac
      661 cttcgcacca accccaaata ttatgcgaag acgcccgagg agctgatgga ggcggtcgcc
      721 cgcgagacca agaagatcga cgggatgatg ccgaacctgt tcggcctgct gccgcgcctg
      781 ccctacggga tccgcgagat cccggccgag atcgcgcccg gcacaaccac cgcctactat
      841 agcggaggca gccccgaaaa tggcatcgcc ggcacctact acgtcaacac cagcaagctc
      901 gaccagcggc ctttgtggga agtgccggcg ctgtcggtcc acgaggcggt tcccggccat
      961 caccaccaga tcgcgctgca acaggagctg ccgctgcccg agtggcgcaa gcacggcacc
     1021 ttcttcaccg ccttcgtcga gggctggggg ctttattccg agcggctcgg gatcgagatg
     1081 ggcctgtacg acacgccggc caaggacatg ggccggctaa gctacgagat gtggcgcgcg
     1141 acccggctgg tggttgacac cggcatccat tcgaaaggct ggtcgaagaa gcaggcgctc
     1201 gacttcatga aggacaatac ggcgctcagc gaggcgaata tcgaggccga ggtcaaccgc
     1261 tacatcagct ggccgggcca ggcgctggcc tacaagatcg gcgagctgcg gattcgcgcg
     1321 ctgcgcaccc gcgccgagaa agagctcggc gccaggttcg acctcaggaa attccacgac
     1381 gcggtgctcg gccagggcgc cgtgccgctc gacgtgctag agcgtcaggt cgaggagtgg
     1441 atcgccgcga ccaaggcgaa ggcgtaggcg gcagcgctag tcgcgcggcg cgctttcgcc
     1501 ttccatctgc tccttgcgct cggcgaacga ctgcttgatc agctggtcaa cgcagccggt
     1561 gaagccgccc ggtccgaccg gcgagcagct gttgatcccg gtccgcccga ccgtctcgaa
     1621 gctcttggcg cgcaccgccc aggcctggcg cgactggagc gagccgccct ggcgcagcct
     1681 ctcgggaatc cggaatcgct cgctctccgg cttgcgcgcg ca
//
LOCUS       DATAIQ010000415         2511 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_299050, whole genome shotgun sequence.
ACCESSION   DATAIQ010000415 DATAIQ010000000
VERSION     DATAIQ010000415.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2511)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2511)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2511
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_299050"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..326
                     /locus_tag="VHN20_06920"
     CDS             <1..326
                     /locus_tag="VHN20_06920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX2725534.1"
                     /translation="TRRLVGAPELALMKPSAVLINTSRGPIVDEAALIDALRRDQIRG
                     AGLDVYDREPLPADHPLRQIPNAVLTPHLGYVTEGAYREFYPDMVENILAWRAGSPVR
                     VLAMA"
     gene            complement(346..1053)
                     /locus_tag="VHN20_06925"
     CDS             complement(346..1053)
                     /locus_tag="VHN20_06925"
                     /inference="COORDINATES: protein motif:HMM:NF013053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family protein"
                     /protein_id="HEX2725535.1"
                     /translation="MKDWLKIIPEEERRTYQSAGFVSNLEIGQKTCLIVVDVTYGFTG
                     SEGLTLEQAVAEFNPACGPAAWEAMPRIARLIELFRRLGRPIVYTRSDLDAVMFTGKA
                     THSRRTGRPPAKFNEFPPAIAPREGEWVLEKTKASGFFQTPLSIYLTKQGIDTAVVCG
                     VSTSGCVRATAVDAFSHGFKTVVVDDCCFDRSHFAHCANLFDLQAKYAAVLSLHELEG
                     MLAPTEPARRAGGQARG"
     gene            complement(1166..2200)
                     /locus_tag="VHN20_06930"
     CDS             complement(1166..2200)
                     /locus_tag="VHN20_06930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725536.1"
                     /translation="MFKQGRVLAIVLAAVLAAASPGQAQEPVEKFYGGKTIRLVVGYP
                     PASTFDTYARTVARHMGHHIPGAPGMIVQNMPGAGSLTATAYMANVAPKDGTVIAMIN
                     PVNVTEPLLDPERAKFDPRKFAWIGSVNREISTCAFWTDKISSLDDLRTKEAVLGATG
                     PSSGSTLDAKTLERVFGLKMKLVTGYPGLTEVRLAAERGEVDGHCGLLVSALKTDVWD
                     EFKKGRIKVPLQMAVEKHPELQNIPNVFDLVKSEEHRNLLKLVFGPWSFGRPLLAPPG
                     VADDRLKALRAAFEATMRDPKFLEEAKKINLEVQPVSFDGIDVLVGELYKTPPPVIEQ
                     ARHVFGIGSR"
BASE COUNT          391 a          865 c          809 g          446 t
ORIGIN      
        1 ggacgcgccg gctcgtcggc gcgcccgagc tcgcgctgat gaagccgtcg gcggtcctga
       61 tcaacacctc gcgcgggccg atcgtcgacg aggcggcgct gatcgatgcc ctgcgtcgcg
      121 accagatccg cggcgccggc ctcgacgtct acgaccgcga gccgttgccc gccgatcatc
      181 ccttgcggca gatccccaac gcggttctga cgccgcatct cggctacgtc accgaaggcg
      241 cctaccgcga gttctacccc gacatggtgg agaacatcct ggcgtggcgc gccggcagcc
      301 cggtgcgcgt tttggcgatg gcgtgaaccc gccgggcgcg cgctctcagc cgcgcgcctg
      361 tccgcccgcc cggcgcgccg gctccgtggg cgccagcatg ccctccagct cgtgcagcga
      421 cagcacggcg gcgtatttgg cctgcaggtc gaacaggttc gcgcaatggg cgaagtgcga
      481 gcggtcgaag cagcaatcat cgaccaccac cgtcttgaag ccgtgcgaga aggcgtcgac
      541 cgccgtggcg cgcacgcagc cggaagtgga gacgccgcac accacggccg tgtcgatgcc
      601 ctgcttggtg aggtagatgc tcagcggcgt ctggaagaag ccgctcgcct tggttttctc
      661 cagcacccat tcgccttcgc gcggcgcgat cgccggcggg aattcgttga acttcgccgg
      721 cggtcgtccg gtccgcctcg aatgcgtcgc cttgcccgtg aacatgaccg cgtcgaggtc
      781 gctgcgcgtg tacacgatcg gccggccgag gcgccggaac agctcgatca ggcgcgcgat
      841 ccgcggcatc gcctcccacg ccgcgggccc gcaggccgga ttgaactcgg ccaccgcctg
      901 ttcgagggtg agcccttccg aaccggtgaa gccataggtc acgtcgacca cgatcaggca
      961 ggttttctgg ccgatctcca gattggagac gaacccggcg ctctgatagg tcctgcgctc
     1021 ctcctccggg atgatcttca accagtcttt cataagcgaa cctccaaagc atgatccggc
     1081 aaagtgggca ccactttgcc gaaaaaagat tatgcggcac gaagagaaag agggcaggat
     1141 cgattcaatc tgaatcgatc ctgccctagc ggctgccgat gccgaaaaca tgccgggcct
     1201 gttcgatcac cggcggcggt gtcttgtaaa gctcgcccac cagcacgtcg atgccgtcga
     1261 acgacacggg ctgcacctcg agattgatct tcttcgcttc ctccaggaat ttcgggtccc
     1321 gcatcgtcgc ctcgaacgcg gcccgcagcg ccttgagcct gtcgtccgcc acgccgggcg
     1381 gcgccagcag cgggcgcccg aagctccacg gcccgaacac gagcttgagg agattgcggt
     1441 gctcctcgga tttcacgagg tcgaacacgt tggggatgtt ctggagctcc gggtgcttct
     1501 cgaccgccat ctgcaggggc accttgattc tgcccttctt gaactcgtcc cacacatccg
     1561 tcttgagcgc cgagacgagg aggccgcaat gcccgtcgac ctcgccgcgc tccgccgcga
     1621 gccgcacctc cgtcagcccc ggatagccgg tcaccagctt catcttcagt ccgaagacgc
     1681 gttcgagcgt cttggcgtcc agcgtcgaac cggaggacgg gccggtcgcc ccgagcacgg
     1741 cttccttcgt gcgcaggtcg tcgagactgc tgatcttgtc cgtccagaag gcgcaggtgc
     1801 tgatctcccg gttgacgctg ccgatccagg cgaacttgcg cggatcgaac ttggcgcgct
     1861 ccgggtcgag cagcggctcg gtcacgttga cggggttgat catggcgatc acggtgccgt
     1921 ccttcggcgc cacgttggcc atgtaggccg tggccgtcag gctgcccgca cccggcatgt
     1981 tctgcacgat catccccggg gcgcccggaa tgtggtgtcc catatgccgc gccaccgtgc
     2041 gcgcataggt gtcgaaggtg ctggccggcg gatagccgac gacgagcctg atggttttgc
     2101 cgccatagaa tttctcgacc ggttcctgcg cctgaccggg cgaagctgcc gccaggacag
     2161 ccgcgagaac gattgcaaga accctgccct gcttgaacat ccttgatcat ccttccactg
     2221 cacgcggcgg gcgcgtcggc tggcctccga ggccgttatc cttgcgcggc ctcggcgatc
     2281 gcgcaattcg cctgcggttt ctcaagcggg agctgccggc gtgggtcatc cgtccttgca
     2341 gacgcggagg cgcgagcatg cgcctccgcg gaacctgctg atcggacttg cccggtttcg
     2401 aagtgtggtc gtgcccgaaa acgcggcgcg cttgcggcct atgccgtcct cgtcgcgttg
     2461 ggccacccga ccggggtggc ccgtgcagtg cgccgcgcgt cagcttgcgc t
//
LOCUS       DATAIQ010000416         1583 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_194481, whole genome shotgun sequence.
ACCESSION   DATAIQ010000416 DATAIQ010000000
VERSION     DATAIQ010000416.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1583)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1583)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1583
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_194481"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..767
                     /locus_tag="VHN20_06935"
     CDS             <1..767
                     /locus_tag="VHN20_06935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycoside hydrolase family 3 N-terminal
                     domain-containing protein"
                     /protein_id="HEX2725537.1"
                     /translation="SAYGRIADQAPMTCREAARLGARLIAHDLLSVGINVDCLPVLDV
                     PQPGAHDVIGDRAYGAGVASVAVLGRAAAEGLLAGGVLPVVKHIPGHGRAGADSHAAL
                     PTVTASREELERTDFEPFRVLADMPLAMTAHVVYAAIDGARPATTSPKVMREVIRGSI
                     GFDGLVMSDDLSMNALSGSLGERAAAAIAAGCDVALHCNGKLEEMRAVAEATPALAGK
                     ALQRADNALARIRHRPEPLDAVDARARLDAALATAA"
     gene            824..>1583
                     /locus_tag="VHN20_06940"
     CDS             824..>1583
                     /locus_tag="VHN20_06940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018408163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ScpA family protein"
                     /protein_id="HEX2725538.1"
                     /translation="MAEALPFDDIELSERAEGEPELHVDVDGFEGPLDLLLELARRQK
                     VDLHRISILALAEQYLTFIEEARRMRLELAADYLVMAAWLAYLKSRLLLPEPPKGEEP
                     SATDLASALALRLRRLEAIRAAASRLSERSQLGRDVFARGQPEPIQIHRQSEWEGTLY
                     DLLSAYARQRQKQATARITLPKRQVWSLEDARAALQQLVGQAEDWTTLDGYLLHYMVA
                     PEMRPTVLASAFSATLEMVREGRLVVRQDEPFAPL"
BASE COUNT          222 a          573 c          554 g          234 t
ORIGIN      
        1 gcagcgccta tggccgcatc gccgaccagg cgccgatgac gtgccgcgag gcggcgcggc
       61 ttggggcgcg gctcatcgcc cacgatctct tgtcggtcgg catcaacgtc gactgcctgc
      121 cggtgctcga cgtgccgcag cccggcgccc acgacgtaat cggcgaccgg gcctacggcg
      181 ccggcgtcgc cagcgtggcc gtgctcgggc gggccgccgc cgaggggctg ctcgccggcg
      241 gcgtgctgcc ggtggtcaag cacatcccag gccacggccg ggccggggcg gacagccacg
      301 cggcgctgcc gaccgtcacg gcctcgcgcg aggagctgga gcgcaccgat ttcgagccgt
      361 tccgggtgct tgccgacatg cccctggcga tgacggcgca cgtggtctat gcggcgatcg
      421 acggtgcccg gccggccacg acctcgccca aggtcatgcg cgaggtgatc cggggctcga
      481 tcggcttcga cggcctcgtc atgagcgacg atctgtcgat gaacgccctg tccggctcgc
      541 tgggcgagcg ggcggcggcg gccatcgcgg caggatgcga tgtcgcgctg cactgcaacg
      601 gcaagctcga ggagatgcgc gcggtggccg aagcgacacc ggctctcgcc ggcaaggccc
      661 tgcagcgcgc ggacaacgcc ctcgcccgca tccgccatcg gccggagccg ctcgatgctg
      721 tggacgcccg ggcccgcctc gacgccgccc ttgcgacggc ggcctaggcg cccgacattg
      781 ggcctaccgc ccgaatcacg ggatcaattg tcatcgggga ttaatggccg aagcgttacc
      841 attcgacgac atcgagctga gcgagcgcgc cgagggcgag cccgagctgc atgtcgacgt
      901 ggacggcttc gaaggcccgc tcgatctgct gctggagctt gcccggcggc agaaggttga
      961 cctgcatcgc atctcgatcc tggcgctcgc cgagcagtat ctgaccttca tcgaggaagc
     1021 gcggcgcatg cggctcgagc tggccgccga ctacctcgtc atggcggcct ggctcgccta
     1081 cctgaaatca cgccttttgc tgccggagcc gcccaagggc gaggagccga gcgccaccga
     1141 tctcgccagc gccctggccc tgcgcctgcg ccggctcgag gccatccgcg cggccgcctc
     1201 ccggctgtcc gagcgcagcc agctcggccg cgacgtattc gcacgcggcc agccggagcc
     1261 gatccagatc caccggcagt ccgagtggga ggggacgctt tacgatctcc tgtcggctta
     1321 tgcccggcag cgccagaagc aggcgacggc ccgcatcacc ctgccgaaac gccaggtctg
     1381 gtcgctcgag gacgcccgcg cggctctcca gcagctcgtc ggtcaggccg aggactggac
     1441 gaccctggac ggctatctgc tgcattacat ggtcgcgccg gagatgcgcc ccacggtcct
     1501 ggcttcggcc ttttcggcga ccctggagat ggtccgcgaa gggcgtctcg tcgtgcgcca
     1561 ggacgagcct tttgcgccgc tct
//
LOCUS       DATAIQ010000417         3515 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_390834, whole genome shotgun sequence.
ACCESSION   DATAIQ010000417 DATAIQ010000000
VERSION     DATAIQ010000417.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3515)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3515)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3515
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_390834"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..318)
                     /locus_tag="VHN20_06945"
     CDS             complement(<1..318)
                     /locus_tag="VHN20_06945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007565869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725539.1"
                     /translation="MGGISVTLEGDNIQLSFQKGQQTTSVLMDAGAARSLVRALAQLL
                     ASLEDEEGGPEADEDFMDVTSPSIDIGTDDRGQAVVALQAGSLPAFMLRLKDDEARHI
                     ANSL"
     gene            complement(486..1220)
                     /locus_tag="VHN20_06950"
     CDS             complement(486..1220)
                     /locus_tag="VHN20_06950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004673162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HEX2725540.1"
                     /translation="MTERNEGNGGAMKVAALGDLHVKEDHSAPYRELFAEISKAADVL
                     VLTGDLTDLGKPREAEILVEDLRACAIPVIAVLGNHDYESGCADEIGKIFRNAGVRLL
                     DGQAIEIDGVGFVGVKGFIGGFGRRMLGSFGEPTIKAMVAESMNEAMRLENAMRTVRT
                     KRAVVVLHYAPVAETVEGEPLEIFPFLGSSRLAETIDRFQVSAVVHGHAHRGKYEGRT
                     PGGAPVYNVAQHIAKPTGRPYALLEV"
     gene            complement(1213..2016)
                     /locus_tag="VHN20_06955"
     CDS             complement(1213..2016)
                     /locus_tag="VHN20_06955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015927235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725541.1"
                     /translation="MEPPLSPAGAPIRTIDAQAEPILKSPEAEAFYVEALRELTRLNL
                     PFLLAGTYAVSAYTGITRPTKDLDIFCKAGDYPRILSHFQDLGHTVEIEDERWLGKVY
                     KGTHFFDIIFASSNGTMPVGDAWFEDARQIEVFGTPVRIVGPTELVWSKSFIQLRHRY
                     DGADVMHVILKQHDQIDWRRLLGYMELHWEVLLSQLIAFRWVYPTERDHIPHWLMDEL
                     LDRLHKQLSLPPPQMKVCRGRMFSRIDYEIDVKEWGFADVGGEGEWRND"
     gene            2169..2318
                     /locus_tag="VHN20_06960"
     CDS             2169..2318
                     /locus_tag="VHN20_06960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725542.1"
                     /translation="MDPKHHRDQTKPNRPNQESQHNKFYAGHKEQPGQREGQQTEQKK
                     RSGLS"
     gene            2610..2816
                     /locus_tag="VHN20_06965"
     CDS             2610..2816
                     /locus_tag="VHN20_06965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003555073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725543.1"
                     /translation="MTSKQPKTRAPTDADLKANPGIGAAKGTTMTGADPRSIAADSTF
                     EGDVENETTREGGVNPRHVGRTNK"
     gene            complement(2977..3174)
                     /locus_tag="VHN20_06970"
     CDS             complement(2977..3174)
                     /locus_tag="VHN20_06970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725544.1"
                     /translation="MMEATHINPFNGGDARPRRDKIDDKLRLALGRGLAAAYADVIRE
                     PIPETMRMWLRQLELKDQRRG"
BASE COUNT          628 a         1174 c         1116 g          597 t
ORIGIN      
        1 gaggctgttg gcgatgtgcc gcgcctcgtc gtccttcagg cgaagcatga acgccggcag
       61 cgaaccggcc tgcaaggcaa ccaccgcctg accccggtcg tcggtgccga tatcgatcga
      121 cggcgacgtg acgtccatga aatcctcgtc ggcctccggg ccgccttcct catcctcgag
      181 cgaggcgagc agttgcgcga gcgcgcggac gagcgaacgg gccgcgcctg catccatgag
      241 gaccgatgtg gtctgctgac ctttctgaaa cgaaagctgg atgttgtcgc cttctagggt
      301 gaccgaaata ccgcccatca atgcctctgg atcctgtccg tagctgaata tagggcgctg
      361 caaggcgaat ggcgaatggt tcggcagtcc gcagcagtag tcggcgaccg cacgttacga
      421 ttgcctcacg ccgattgccg gctgccgatc atcccccgcc ggtcgccgtc gcctcttcgc
      481 cttcctcaca cctcgagaag ggcgtagggc cgcccggtcg gtttggcgat gtgctgggca
      541 acgttgtaga ccggagcccc gccgggggtg cggccttcgt atttgccgcg gtgggcgtgg
      601 ccgtggacga cggcgctcac ctggaagcga tcgatcgtct cggcgagccg cgacgacccc
      661 aggaacggaa agatctccag cggctcgccc tcgaccgtct ccgccaccgg cgcgtaatgc
      721 agcacgacga cggcccgctt cgtgcgcacc gtgcgcatgg cgttctcgag ccgcatcgcc
      781 tcattcatgc tctcggccac catcgccttg atggtgggct cgccgaacga tcccagcatg
      841 cgccgcccga agccgccgat gaagcctttg acgccgacga agccgacccc gtcgatctcg
      901 atcgcctggc cgtcgagcag ccgcacaccg gcatttctga agatctttcc gatctcgtcg
      961 gcgcagccgg attcataatc gtggttgccg agcacggcga tcaccgggat cgcgcaggcg
     1021 cgcagatcct cgacgaggat ctcggcttca cgcggcttgc cgagatccgt gagatcgccg
     1081 gtcagcacga gcacgtcggc tgctttcgag atctcggcga acagttcgcg gtacggcgcc
     1141 gaatggtctt ccttgacgtg caggtcgccg agcgccgcca ccttcatcgc gccgccgttg
     1201 ccctcgttgc gttcagtcat tgcgccattc gccctcaccg ccgacatcgg cgaagcccca
     1261 ttccttgaca tcgatctcgt agtcgatgcg cgagaacatg cgcccgcggc agaccttcat
     1321 ttgcggcggc ggcaggctca gctgcttgtg cagccggtcg agcaattcgt ccatcagcca
     1381 gtgcgggatg tggtcgcgct cggtcggata aacccatcgg aaggcgatga gctgggagag
     1441 cagcacttcc cagtgcagct ccatgtagcc gagcaggcgc cgccagtcga tctgatcgtg
     1501 ctgcttgagg atgacgtgca tcacgtcggc gccgtcgtag cggtggcgca gctggatgaa
     1561 ggatttggac cacacgagct cggtcggccc gacgatgcgc acgggcgtgc cgaacacctc
     1621 gatctgccgc gcatcctcga accacgcatc gccgaccggc atcgtgccgt tcgacgaggc
     1681 gaagatgatg tcgaagaaat gcgtgccctt gtagaccttg ccgagccagc gctcgtcctc
     1741 aatctcgacc gtgtggccga ggtcctggaa atggctgagg atgcgcgggt agtcgccggc
     1801 cttgcagaag atgtcgagat ccttggtcgg gcgcgtgatg ccggtatagg cgctgaccgc
     1861 gtaggttccg gcaagcagga agggcaggtt gagcctggtc aactcgcgca gcgcctccac
     1921 atagaaggcc tccgcctccg gcgatttcag gatcggctcg gcttgcgcat cgatcgtgcg
     1981 gatcggtgcg ccggccgggc tgagaggcgg ttccatggtc atgtcggtgt ttcactatga
     2041 ggcgggcacg cgcctttcca caacagccca ggatgggtgc ggttcccttt ggcagagtgt
     2101 cgggcgcagt agcggaacga tgactccggg cgggcgtttc cacctcgatc acatgacggg
     2161 agacgccgat ggacccgaaa catcaccgtg accagaccaa gccgaaccgg cccaatcagg
     2221 agagtcagca caacaaattc tacgccggtc acaaggagca gcccggacag cgtgagggcc
     2281 agcagaccga gcagaagaag cgctccgggc tttcgtaagc gctgcgcacg cgcattgcac
     2341 gccccccggg agacacagca tgagtccgca tccgctgaat ccggtgccgc taccggagac
     2401 gccgaggccc gacccggccg atcccctttc caacccgccg ccgttgcccg gccatgctcc
     2461 gcaggaactg ccagtcaggc agccgagcga agtgccgacg ccggatccgg acctcccgcc
     2521 cgcaagcccc ggcacgccgt cacacccgct cggtccctac gatccgcaac cgtaggacgg
     2581 gggccgctca aacagacgag gagtcgatca tgacctcgaa acagccgaaa acgcgcgctc
     2641 ccaccgacgc cgacctcaag gccaatcccg gtatcggcgc ggccaaggga acgacgatga
     2701 ccggcgcgga ccctcgctcg atcgcggccg attccacctt cgagggcgat gtcgagaacg
     2761 agaccacgcg cgaaggcggc gtgaacccgc gccacgtcgg ccgcacgaac aagtaggctt
     2821 ttgcttattt gcctagcgca tcgctgaggc ggcggtcggt cgggagcgcc agcaacaagg
     2881 cggcgctatt ccgacgtgcc gggccgcctc tcagccgccg gacgtgaagc aacaacactg
     2941 cgacgcgatg ttggcctttg aactggcggc gccgagctag ccgcgacgct ggtccttgag
     3001 ctccagttgg cgcagccaca tgcgcatggt ttcgggaatc ggctcccgga tcacgtccgc
     3061 gtaagccgct gcgagacccc gtccaagggc gagacgcagc ttgtcgtcga tcttgtcgcg
     3121 tctcggacgc gcgtcacccc cgttgaacgg gtttatatgt gtggcctcca tcatcaccgt
     3181 caccgccgcg cttcacgtga atcaccccgt caggacctcg tgctgagaca gccgtggcct
     3241 ccaaccgctc ctttacacat gttaaaaagt ctcaggcggg cccggagttc cctcaaaagt
     3301 taacttttca aacgccagtt gtgcgcgccg cggccgtgcg gcgcgttccg acgcgtcagc
     3361 cgagcgcgat gatgccgctc gttacgaggg tggcgagcgc gcccagaacg atgaaggtgc
     3421 gcaacagggc gaccggctcg cggcgcgcgg ggagggtgat gtagtcaggc atgtgacaac
     3481 gcccatcgtt gacccggtcc cctagtccgg gattc
//
LOCUS       DATAIQ010000418         2897 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_194486, whole genome shotgun sequence.
ACCESSION   DATAIQ010000418 DATAIQ010000000
VERSION     DATAIQ010000418.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2897)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2897)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2897
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_194486"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(65..1336)
                     /locus_tag="VHN20_06975"
     CDS             complement(65..1336)
                     /locus_tag="VHN20_06975"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012319779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEX2725545.1"
                     /translation="MRAPRRIAVVVKGYPRLSETFIAQELLALEERGIPLEIWSLRRP
                     TDKAVHPMHKRIRASVTYLPEYLYQEPLRVLRGLIWSARQRNMGALLRVFWRDLSRDL
                     TPNRLRRLGQAFVMARELPEPVSHLHVHYLHTPASVVRYVSLLTGRSWTFSAHAKDIW
                     TTPAWEKREKIADATWGVTCTAQGAAHLNALAPAPDRVTLAYHGLDLGRFPAPPAARP
                     ARDGSDPADPVRIVSVGRAVAKKGFGDLLKALAALPDGLHWRFAHVGGGELLEGLQAQ
                     AAASGIAGKTAWLGAKPQPDVIALLREADLFVLPAKEARSGDRDGLPNVLMEAASQGL
                     AIVATDFAGIPEFIRDGSEGQLVAAGDWAALSNAINLLARDPEHRTRLGSAAHLRLRR
                     DFTTDRTVDLLAARFHALSGASPLHTQEAAE"
     gene            complement(1349..2533)
                     /locus_tag="VHN20_06980"
     CDS             complement(1349..2533)
                     /locus_tag="VHN20_06980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012319778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016758 - hexosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX2725546.1"
                     /translation="MLIYSHDTFGLGHLRRSRAIANALVHEHPGLSVIILSGSPVIGN
                     FEFDSGVDHVRIPGVTKLPDGSYRSLNLNMSIDEAVALREGIILKTAQIFRPDLLIVD
                     KEPTGFRGELMPALEWLRQHDCRFVLGIRDVLDGPELLVPEWERKGAPEALRYYDDIW
                     VYGLREIYEPLAALELSRDVERRITYTGYLQRELPQQPSLSRYPKITKSPFILVTTGG
                     GGDGEDLIDWVLSAYEADASIEMPALVVFGPFIDRDRRRGFLERIGRHPKLDAIAFDS
                     KIELLMKKAAAIVAMGGYNTFCEILSFDKPALIVPRTRPRLEQYIRAVQAEKLGLVRM
                     LADDRARRDPQRMAAALRSLLAQPRPSDVVVPGLLDGFEVIRERVAATLRRRVAIPQA
                     AE"
BASE COUNT          469 a          948 c         1046 g          434 t
ORIGIN      
        1 ccggaaggcg acgggtgatg cgggcttttg agcggcgcgt agaaggcgac gggtatcgcc
       61 cgattcactc ggcggcttcc tgcgtgtgca acggggaggc gcccgacagg gcgtgaaacc
      121 gcgccgccag aagatcgacg gtgcggtccg tcgtgaagtc gcggcgcagg cgcagatggg
      181 cggccgatcc aagacgggtt cggtgctccg ggtcgcgagc cagcaggttg atcgcgttcg
      241 acagcgccgc ccagtcgccg gccgcgacca gctgcccctc gctgccgtcg cggatgaatt
      301 cgggaatgcc ggcaaaatcg gtcgcgacga tcgccagacc ctgactcgcc gcctccatca
      361 gcacgttggg aagcccgtcg cggtcgcccg agcgggcctc cttggcgggc aggacgaaca
      421 ggtcggcttc gcgcaacagg gcgatcacgt cgggctgggg cttggcgccg agccaggcgg
      481 tcttgccggc aatgccgctc gcagccgcct gcgcctgcag gccttcgagc agctcgccgc
      541 cgccgacatg ggcgaagcgc cagtgcagcc cgtcgggcaa ggcggccagc gccttgagga
      601 gatcgccaaa gcctttcttg gccacggcgc ggcccaccga gacgatgcgc accggatcgg
      661 cggggtcgga gccgtcgcgg gccggccgcg cggcgggggg cgccggaaag cggccgaggt
      721 cgaggccatg ataggcaagc gtcacgcggt ctggcgccgg cgcgagggca ttgagatgcg
      781 ccgcgccctg cgccgtgcag gtgacgcccc aggtggcatc ggcgatcttc tcgcgcttct
      841 cccaggccgg cgtcgtccag atgtccttcg cgtgggccga gaaggtccag ctgcgtccgg
      901 tgagcagcga cacgtaacgg acgaccgacg ccggcgtgtg caggtaatgc acgtgaagat
      961 ggctcaccgg ctccggcagc tcgcgcgcca tcacgaaggc ctggccgagc cgccgcaggc
     1021 ggttgggcgt gagatcgcgg gagaggtccc gccagaagac ccgcagcaac gcgcccatat
     1081 tgcgctgccg tgcgctccag atcaggccgc gcagcacgcg cagcggctcc tgatagagat
     1141 attccggcag gtaggtcacc gacgcacgga tgcgcttgtg catcgggtgc acggccttgt
     1201 cggtcggacg gcgcagggac cagatctcga gcgggatgcc gcgctcctcg agggcgagaa
     1261 gctcctgggc gatgaaggtt tcggagagcc tcgggtagcc tttgacgacg accgcgatcc
     1321 ggcgaggcgc gcgcatggtt cgatcgggct actcggccgc ctgcggtatg gccacgcggc
     1381 gccgcagcgt ggcggcgaca cgctcgcgga tcacctcgaa cccgtcgagc aggccgggca
     1441 cgacgacgtc cgaaggacgc ggctgggcga gcaaggaacg cagcgccgct gccatgcgct
     1501 gcgggtcacg gcgcgcccgg tcgtcggcga gcatgcgcac gagcccgagc ttctcggcct
     1561 gcacggcgcg gatgtattgc tcgaggcgcg ggcgggtccg cggcacgatc agtgccggct
     1621 tgtcgaagga caggatctcg cagaacgtgt tgtagccgcc catcgctacg atcgccgcgg
     1681 ccttcttcat caggagctcg atcttgctgt cgaaggcgat cgcatcgagc ttcggatgcc
     1741 gccctatgcg ctcgaggaag ccgcgcctgc gatcgcggtc gatgaagggc ccgaacacca
     1801 cgagcgccgg catctcgatg gaagcgtccg cctcgtaggc ggacaggacc cagtcgatca
     1861 gatcctcgcc gtcgccgccg ccgccggtcg tgacgaggat gaagggcgac ttggtgatct
     1921 tcgggtagcg gctcagggac ggctgctgcg gcagctcgcg ctgcaggtag ccggtatagg
     1981 tgatgcgccg ctcgacgtcg cgcgacagct cgagcgctgc gagcggctcg tagatctcgc
     2041 gcaagccgta gacccagatg tcgtcgtaat agcgcagcgc ttcaggggcg cccttgcgct
     2101 cccattccgg caccagcagc tcagggccgt cgagcacgtc gcggatgccg agcacgaacc
     2161 ggcagtcatg ctgccgcagc cactccagcg ccggcatcag ctcgccacgg aacccggtcg
     2221 gctccttgtc gacgatgagc aggtccggcc ggaagatctg ggccgtcttc aggataatgc
     2281 cctcgcgcaa agccacggcc tcgtcgatgg acatgttgag gttgaggctg cggtagctgc
     2341 cgtcgggcag cttcgtgacg cctggaatgc ggacgtggtc gacgccgctg tcgaactcga
     2401 agttgccgat cacgggtgac ccggacagga tgatgaccga cagtccggga tgctcgtgaa
     2461 ccagcgcatt ggcgatggcg cgcgagcgcc gcaaatggcc gaggccgaag gtatcgtggc
     2521 tatagatgag cacgcgcgcc tgcccgcgtc catccggccg caaggcggct tccgcatctc
     2581 tggtttcgtt aaccatgcgg ggtcatgacc tctcgcacca cgtgagcacg acggcgacag
     2641 cgtagaacga ttgtttttga acgcgccggg cctataggca taccgcccgg ccggcggtaa
     2701 gggaacccct ctgcggcaaa cgcccggcgc atcggcggat cgtggttatt ttgcacccca
     2761 ggtcgcgagt ggggggcccg gaaccccatt tcgcgcgggt tcgagccccg ttggggccgg
     2821 cgccggccaa aaatcaccgc cgcatcggca tccatgcgtg tggggaggat gtggccggca
     2881 tgcaggctgc cgccatg
//
LOCUS       DATAIQ010000419         4525 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_240874, whole genome shotgun sequence.
ACCESSION   DATAIQ010000419 DATAIQ010000000
VERSION     DATAIQ010000419.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4525)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4525)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4525
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_240874"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..172)
                     /gene="secG"
                     /locus_tag="VHN20_06985"
     CDS             complement(<1..172)
                     /gene="secG"
                     /locus_tag="VHN20_06985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003602137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HEX2725547.1"
                     /translation="MQTVIIVVHLFIVLALIGVVLLQRSEGGLGLGGGGGGGGGFMTG
                     RGQANALTRATAI"
     gene            complement(316..1032)
                     /locus_tag="VHN20_06990"
     CDS             complement(316..1032)
                     /locus_tag="VHN20_06990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010661065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HEX2725548.1"
                     /translation="MLGVHKWYGEFHVLRDINLTVRRGERIVVCGPSGSGKSTMIRCI
                     NRLEEHQQGRIIVDGIELTNDLKRIDEIRREVGMVFQHFNLFPHLTVLENCTLAPIWV
                     KKMPRKDAEEVAMKYLRRVKIPEQANKYPGQLSGGQQQRVAIARSLCMNPKIMLFDEP
                     TSALDPEMVKEVLDTMVSLAQEGMTMIVVTHEMGFARQVANRVIFMDYGQIVEANTPD
                     EFFKNPQHERTKLFLSQILH"
     gene            complement(1109..2260)
                     /locus_tag="VHN20_06995"
     CDS             complement(1109..2260)
                     /locus_tag="VHN20_06995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009492609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEX2725549.1"
                     /translation="MNTAVDTLRYVRAESMEALPPPTLNRGVFGWLRQNLFATIPQAI
                     LTFVALYLVFVTVPPIIKFLFTDAVWTGTSREACREDVIGRPVGACWAYVIDKINYFV
                     YGSYPVSERWRVNIFFVLLAVGVVWLLWPKAPRRGLGALYFFVLFPVLAYVLLSGSDL
                     LGLDEVPTSLWGGILVTVIVATVGIVFALPFGVLLALGRRSKLPAVRLASVIFIEFVR
                     GVPLITVLIMANTLLPLFLPGGMTVDRLLRPLVGVAVFSAAYMAEVVRGGLQAMPRGQ
                     YEGAMSLGLGYWQMMWLIILPQALRIVIPGIVNNFISLFKDTTLVAIVGIFDLIRTIE
                     ASRVDPYWAAPTVGYTGYAFAALFYFLFCWGMSRYSLAMERRLAAGQRR"
     gene            complement(2266..3408)
                     /locus_tag="VHN20_07000"
     CDS             complement(2266..3408)
                     /locus_tag="VHN20_07000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEX2725550.1"
                     /translation="MRGLVYQIVLFLVIAFLVVAAVMNARANLQRAGITSGTGFLSNT
                     AGFDISQALIPFSAAGSTYGEAFIVGLLNTLLVAAIGVVFATILGFTIGVARLSGNWI
                     VAKVAMIYVEVVRNVPLLLQLLFWYNAVLAPLPSPRESINVAGSFFLNNRGLFMPKPM
                     FGGDIWILLAAFVAGLAGTVGFYVWARRQQEQTGRQYPVGLTALALIVGLPVLVWIML
                     ALTIGNPISFEVPEQQRFNLRGGMQVLPEFVALLVGLVTYTAAFIAEVVRAGILAVSK
                     GQTEAASSLGLRPGFTLRLVVIPQAMRVIVPPLTSQYLNLTKNSSLAVAIGYPDLVQV
                     FMGTVLNQTGQAVVVVVITMSVYLTISLVTSFVMNIYNRRVAIVER"
     gene            complement(3598..>4525)
                     /locus_tag="VHN20_07005"
     CDS             complement(3598..>4525)
                     /locus_tag="VHN20_07005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012335535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HEX2725551.1"
                     /translation="QKGFLACGSNPALAGFGVPDAQGNWTGLDVEFCRAIAAAIFNDP
                     TKVRFIPLTAKDRFTALQSGEVDVLARNSTATMSRDTQLNLDFPIINYYDGQGFMVRK
                     KLGIASAKELSGASVCTQQGTTTELNLADFFRANNLKYEVVAFATADETFKAYEAGRC
                     DAFTTDASGLYAERAKAASPDEHMVLPEIISKGPLGPAVRHGDNQWGDVVRWVHYAML
                     NAEELGVTKANVDQMLKSTNPEIKRLLGTEGKFGDAVGLPNDWAVRIIKHVGNYGESF
                     ERNVGMGSPLKIQRGQNALWTKGGLQYGQPVR"
BASE COUNT          839 a         1458 c         1492 g          736 t
ORIGIN      
        1 ggatcgccgt ggcgcgcgtg agcgcgttcg cctgcccgcg gcccgtcatg aagccgccgc
       61 cgcctccgcc gcccccgccg agcccgagcc cgccttcgga gcgctgcagc agcaccacgc
      121 cgatgagggc aaggacgatg aacaggtgga cgacgatgat gacggtctgc atgggattcc
      181 ggtcgggcgc gcggcccctc gcgttcgcgg gctggttaca cgaagtgccg ctccgcgcca
      241 acccgcgcgg gcgctcgcgc tgtcgcagcc caggagatgg ggacggcgcg ccctcgcacc
      301 aagccccgcg gcccgtcagt gcaggatctg gctcaggaac agcttcgtgc gctcgtgctg
      361 cgggttcttg aagaactcgt ccggcgtgtt cgcctcgacg atctgcccgt agtccatgaa
      421 gatgacgcgg ttggcgacct ggcgcgcaaa acccatctca tgcgtcacga cgatcatggt
      481 catgccttcc tgggccaggc tgaccatggt gtcgagcacc tccttgacca tctccgggtc
      541 gagcgccgag gtcggctcat cgaacagcat gatcttcggg ttcatgcaca gcgagcgcgc
      601 gatggcgacg cgctgttgct gcccgccgga cagctgcccg ggatatttgt tggcctgctc
      661 cgggatcttg acccggcgca ggtatttcat ggcgacctct tcggcgtcct tgcgcggcat
      721 cttcttgacc cagatcggcg ccagcgtgca gttctcgaga accgttagat gcggaaacag
      781 gttgaagtgc tggaacacca tgccgacctc gcggcggatc tcgtcgatgc gcttgaggtc
      841 gttggtcagc tcgatgccat cgacgatgat gcggccctgc tggtgctcct cgagccggtt
      901 tatgcatcgg atcatggtcg acttgcccga ccccgacggg ccgcacacga cgatgcgctc
      961 gccacgcctg acggtgaggt tgatgtcgcg caggacgtgg aactcgccgt accatttgtg
     1021 cacgccgagc atctcgaccg cggcctgggc cgcgcccggc tgctgatcgg cacgggtcga
     1081 ttgcggaacc gtcacggtcg ccatggtgtc accgtctctg tccggctgcg aggcgtcgtt
     1141 ccatcgccag cgagtagcgc gacatgcccc agcagaaaag gaagtagaac agggccgcga
     1201 acgcgtagcc cgtgtagccg accgtcggcg ccgcccaata gggatcgacg cgcgacgctt
     1261 cgatcgtgcg gatcaggtcg aagatgccga caatcgccac cagcgtcgtg tccttgaaga
     1321 ggctgatgaa gttgttgacg atacccggga tgacgatgcg cagcgcctgc ggcaggatga
     1381 tgagccacat catctgccag tagccgaggc cgagggacat ggcgccttcg tactggccac
     1441 gcggcatcgc ctgcagcccg ccgcgcacca cctccgccat gtaggccgcc gagaacaccg
     1501 ccaccccgac gagggggcgc agcaggcggt cgacggtcat gccgccgggc aggaatagcg
     1561 gcagcaaggt gttggccatg atcagcacgg tgatcagcgg cacgccgcgc acgaactcga
     1621 tgaaaatgac ggaagccagg cgcactgccg gcagcttcga gcgccgtccg agggcgagca
     1681 gaacgccgaa cggaagcgcg aaaacgatgc cgacggtcgc cacgatgacg gtgacgagga
     1741 tgccgcccca cagcgacgtc ggcacctcgt cgaggccgag cagatccgag ccgctgagaa
     1801 gaacgtaggc gagcaccggg aagagaacga agaagtagag cgcccccaac ccgcgccgcg
     1861 gcgctttcgg ccacagaagc cagacgaccc cgacggcgag aaggacaaag aagatgttga
     1921 cccgccagcg ctcggaaacg ggatacgatc cgtagacgaa gtaattgatc ttatcgatca
     1981 cgtaggccca gcatgccccg acggggcggc cgatcacgtc ctcccggcaa gcctcgcggc
     2041 tcgtcccggt ccagacggcg tccgtgaaca ggaacttgat gatcgggggg acggtcacga
     2101 agacgagata caacgcgacg aacgtcagga tcgcctgcgg aatggtggcg aacaggttct
     2161 gccgaagcca tccgaagacg ccgcggttca gcgtcggcgg cggcaacgcc tccatgctct
     2221 cggcgcgaac gtagcgaagc gtgtcgacgg cggtgttcat gacggctacc gttccacgat
     2281 cgccacgcgg cgattgtaga tgttcatgac gaacgaggtg accaggctga tcgtgagata
     2341 cacgctcatc gtgatcacca cgaccacgac cgcttgtccc gtctggttca gcaccgtccc
     2401 catgaagacc tgcaccaggt ccgggtagcc gatcgccacg gcgagcgacg agttcttggt
     2461 gagattcaga tattggctgg tcagcggcgg aacgatcacc cgcatcgcct gcgggatgac
     2521 gacgaggcgc agcgtgaagc ccgggcgcag gccgagcgac gaggctgctt ccgtctgtcc
     2581 tttcgagacc gcgaggatgc cagcgcgcac gacctcggcg atgaacgccg ccgtataggt
     2641 caccaatccg accagcagcg ccacgaattc cggcaacacc tgcatgccgc cacgcagatt
     2701 gaagcgctgt tgctccggca cctcgaagct gatcgggttg ccgatggtca aggcgagcat
     2761 gatccagacg aggaccggta agccgacgat cagcgccagc gccgtcaagc cgaccggata
     2821 ctgccggccg gtctgctcct gttgacgtct tgcccagacg tagaagccga ccgtgccggc
     2881 gaggcctgcg acgaacgcgg caagcaggat ccagatgtcg ccgccgaaca tcggcttcgg
     2941 catgaacaga ccgcgattgt tcagaaaaaa gctgccggcc acgttgatcg actcgcgcgg
     3001 gctcgggagc ggcgcgagca ccgcattgta ccagaacagc agctgcagca gcagcggcac
     3061 gttgcgcacg acttcgacat agatcatggc cactttggcg acgatccagt tgcccgacag
     3121 gcgggcgacg ccgattgtaa acccgaggat tgtggcaaag acgacgccga tggccgcaac
     3181 cagcagggtg ttgagcagcc cgacgatgaa ggcttcacca taggtcgagc ccgcggcgct
     3241 gaacgggatc agcgcctggc tgatatcaaa cccggcggtg ttgctgagaa agcctgtgcc
     3301 ggaggtgatg ccggcgcgct gcaggttcgc gcgtgcgttc atcacggcgg cgacgacgag
     3361 gaacgcgatc accaagaaca gcacgatctg atagaccaga ccgcgcacct tcggatcgta
     3421 gaggagagac gcccgcgggg atgcttgcct tggccctgct tgagcgactg tcgccacggt
     3481 ctgttccttg cggcttgctc tcaaaacgcc ggcactcgcc tcgcagccat catgcgccgc
     3541 aattcggccg cggccaagtc aaaagaggcg cccgggcgtg ccgcgcgcct cagactttca
     3601 gcggacgggc tgcccgtatt gcagcccacc cttggtccaa agggcattct gtccgcgctg
     3661 gatcttcagc ggcgagccca tcccgacatt gcgctcgaag ctctcgccgt aattgccgac
     3721 gtgcttgatt atgcggaccg cccagtcatt gggaaggccg accgcgtcgc cgaactttcc
     3781 ttcggtgccg aggaggcgct tgatctccgg attggtcgac ttgagcatct ggtcgacgtt
     3841 ggccttggtc acgccgagct cctcggcgtt gagcatggcg tagtgcaccc agcgcacgac
     3901 atcgccccac tggttgtcac cgtgccggac cgccggcccg agcggcccct tcgagatgat
     3961 ctcgggcagg accatgtgct cgtccgggct cgccgccttg gcgcgctcgg catagaggcc
     4021 cgaggcgtcg gtcgtgaacg cgtcgcagcg gccggcctcg taggccttga aggtctcatc
     4081 cgccgtggcg aaggcgacga cctcgtattt gaggttgttg gcgcggaaga agtcggcgag
     4141 gttgagctcg gtcgtggtgc cctgctgcgt gcacacggac gcgccgctca gttccttcgc
     4201 cgacgcgatg ccgagcttct tgcgcaccat gaagccctgg ccgtcgtagt agttgatgat
     4261 cgggaaatcg aggttgagct gggtgtcgcg cgacatggtc gccgtcgagt tgcgcgccag
     4321 cacgtcgacc tcgcccgact gcagggccgt gaagcggtcc ttggcggtca gcgggatgaa
     4381 gcgcaccttc gtcggatcat tgaagatcgc cgccgcgatg gcgcggcaga attcgacgtc
     4441 gaggccggtc cagttgcctt gcgcgtcggg cacgccgaag ccggcgagcg ccgggttcga
     4501 accgcaggcc aggaaaccct tctgc
//
LOCUS       DATAIQ010000420         3969 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_299385, whole genome shotgun sequence.
ACCESSION   DATAIQ010000420 DATAIQ010000000
VERSION     DATAIQ010000420.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3969)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3969)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3969
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_299385"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1118)
                     /locus_tag="VHN20_07010"
     CDS             complement(<1..1118)
                     /locus_tag="VHN20_07010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX2725552.1"
                     /translation="MSAFEVDLFVIGGGSGGVRAARIAAGYGAKAMLAEEYRVGGTCV
                     IRGCVPKKLLVYASRFSDEFEDAAGFGWSVPEARFDWPTLIRNKDAEIARLEQVYRAN
                     LGRAGVEIIDSRAVIEDPHTVRVVKTGDRIRARHILVSVGAHPVLEPRIPGGELGITS
                     NEVFHLEQLPRRILVVGGGYIAVEFAGVFLGLGSEVTLLHRGDKLLRGFDEDIRDALG
                     DAYAKRGVRLALGRTVDRLERTGDGIAATLSDGTTTNVDTVLVATGRRPNTAGLGLER
                     AGITVDAVGAIPVDAYSQTATPSIYAVGDVTNRVNLTPVAIREGHAFADTLFGGTPTA
                     VDHSLIPTAVFSSPDLGVIGLSEAAARRVCSEVDIYKT"
     gene            1473..2342
                     /locus_tag="VHN20_07015"
     CDS             1473..2342
                     /locus_tag="VHN20_07015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018647737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEX2725553.1"
                     /translation="MAPAAPGGGWDQTARSMQQALVASGAAKSVQVTNVPGAGGTVGL
                     AQFVNGAKGDPNQLMVNGFVMVGAILTNKSPVSLEQTTPIARLTAESEAIVVPAGSSI
                     KTAKDLAAAVKADPGKVTWAGGSAGGVDHIAAALFAKEAGADPTKINYIPFSGGGEAL
                     AAILGGKVTAGISGYGEFEGQVKAGKLRVIAVTSAQRLEGVDAPTLKEQGINLEITNW
                     RSVVAPPGITADQRNTLTATVEKMAKSKEWNEILKQKGWDDAYLSGDAFAQFLKQEQA
                     RVTEVLKSVGLVK"
     gene            2498..2974
                     /locus_tag="VHN20_07020"
     CDS             2498..2974
                     /locus_tag="VHN20_07020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018458587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter TctB
                     family protein"
                     /protein_id="HEX2725554.1"
                     /translation="MSDMRRERRVDPAGVVIAVVLFGAAAVIWWDMTTLQISSVYGVG
                     PKAMPIVVATGLALLAVGNLITALRGDLPPRESAAAGPVLLILVGLAALIAAIAFGGG
                     FIPGMTILFATTATAFGRRAVLIDLVIGFVLATVVYLLFVKLLTLSLPVGPLERLL"
     gene            2982..>3969
                     /locus_tag="VHN20_07025"
     CDS             2982..>3969
                     /locus_tag="VHN20_07025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HEX2725555.1"
                     /translation="MDALSSLAQGLAVAVQPHNLLFALIGVLLGTAVGVLPGIGPALT
                     VALLLPITYKLDPGGSLIMFAGIYYGGMYGGSTTAILINTPGESASMATALEGNRMAK
                     AGRGGPALATAAIGSFVAGTIATLGLTFLAPWLVEVAVRFGPEDYFALMCVAFITVSA
                     TFGGSPVRGLTSLFIGLMLGLVGIDRLTGQARLTFGIPELLDGVEITTLAVGLFAVGE
                     ALFVVSRRHHTKEELIPVRGSLWMTAQDWSRSWKPWLRGTLFGFPIGALPAGGAEIPT
                     FLSYSTEKRLTKHPEEFGRGAIEGVAGPEAANNASAAGTLVPLLTLGLPTSAT"
BASE COUNT          608 a         1363 c         1332 g          666 t
ORIGIN      
        1 ctggtcttgt agatatcgac ctcgctgcac acgcggcgcg cggcagcttc gctgagcccg
       61 atcacgccga gatccgggct ggagaaaacc gcggtcggga tcaggctgtg gtcgacggcg
      121 gtcggcgtgc cgccgaataa ggtgtcggca aaggcgtggc cctcgcggat cgcgaccggc
      181 gtcaggttga cccggttggt cacgtcgccg acggcgtaga tcgatggcgt tgccgtctgc
      241 gaatacgcat ccacggggat cgcgccgacg gcatcgaccg tgataccggc acgttcgagc
      301 ccgagcccgg cggtgttggg acgccggccg gtggcaacca ggacggtgtc cacattcgtg
      361 gtcgtcccgt ctgagagcgt cgcagcgatg ccgtcgccgg tgcgctccag tcgatcgacc
      421 gtgcggccca gcgccagcct gacgccgcgc ttggcatacg cgtcgccgag cgcgtcgcgg
      481 atatcctcgt cgaagccgcg caggagcttg tcgccccggt gcaggagggt cacctcgctg
      541 ccaagaccga ggaacacgcc cgcgaactcg accgcgatat agcccccgcc gacgacaaga
      601 atgcgcctcg gaagctgttc caggtggaac acttcgttcg aggtgatgcc gagctcgccg
      661 ccggggatgc gcggctcgag caccggatgc gcaccgaccg acactaggat gtggcgcgcg
      721 cgaattcggt cgccggtttt gacgacccgc acggtatgag ggtcctcgat cacggcacga
      781 ctgtcgatga tctcgacccc ggcgcgtccg aggttggcgc gatacacctg ctccagccgc
      841 gcgatttcgg cgtccttgtt ccggatcagg gtcggccagt cgaagcgcgc ctccggcacg
      901 gaccatccga accccgccgc gtcctcgaac tcgtcgctga agcggctcgc gtaaacgagg
      961 agcttcttcg gcacgcaacc gcggatcaca caggtgccgc cgacccgata ctcctcggcc
     1021 agcatcgcct tggcgccgta gccggcggcg atgcgcgcgg cgcgcacgcc tcccgagccg
     1081 ccgccgataa cgaacagatc gacctcgaac gcgctcatgg cttcagcctc atccggcggc
     1141 agggaactcg gttaaccgtc tacaaactcg gcgcggacaa cacgacgcga tgggagtcca
     1201 caagcggcct gcgaccggag ggttccttta tgggaagctt caccacgaat aaagcccgcg
     1261 agcgcctgcg cgcttgccgc gcctgtcgtg cctcgctacg cttcatgcaa agcggggctt
     1321 cccacgggag cgccacgtcc gatcgacgag ctcccacata ccggaggaaa tcactgatgt
     1381 cgttctctca agctttgcgg cgcgggctga tcgcgaccgc ggcggtcgcc ggccttgccg
     1441 gcagcgcctt ggcccagacc gaaatcaaaa tcatggcgcc ggcggccccg ggcggcggct
     1501 gggaccagac cgcgcgctcg atgcagcagg ccctcgtcgc gtcgggcgcg gccaagagcg
     1561 tgcaggtcac gaacgtgccg ggcgccggcg gcacggtcgg cctcgcgcag ttcgtcaacg
     1621 gcgccaaggg cgatccgaac cagctcatgg tcaacggctt cgtgatggtc ggcgccattc
     1681 tgacgaacaa gtcgccggtc agcctcgaac agaccacgcc gatcgcgcgc ctgaccgcgg
     1741 aatcggaagc catcgtcgtt ccggcgggct cgtcgatcaa gacggcgaag gacctggcgg
     1801 ctgccgtcaa ggccgatccc ggcaaggtga cctgggccgg cggctcggcg gggggcgtcg
     1861 atcacatcgc cgctgcgctc ttcgccaagg aagccggagc cgatccgacc aagatcaact
     1921 acatcccgtt ctccggcggc ggcgaagcgc ttgccgccat cctcggcggc aaggtgacgg
     1981 ccggcatctc cggctacggc gagttcgaag gtcaggtgaa ggccggcaag ctgcgggtca
     2041 tcgcggtcac gtcggcccag cgtctcgagg gcgtcgacgc accgaccctc aaggagcagg
     2101 gcatcaacct ggaaatcacc aactggcgct cggtcgtggc tcctcccggg atcacggctg
     2161 accagcgcaa cacgctgacc gccaccgtcg aaaagatggc gaagtccaag gaatggaacg
     2221 agatcctcaa acagaagggc tgggacgacg cctatctgtc gggcgacgct ttcgcgcagt
     2281 tcctgaagca ggagcaggcg cgcgtgaccg aggtcctcaa gtcggttgga ctcgtgaagt
     2341 gatctgatcg tgatggtccg gggtgggagc ttggggatag ctcccgccgc cggcctcttt
     2401 gggttgcatg atccggcaaa gtggcttcca cttcgccgga tcatggtcta ggcggggccg
     2461 ccgctcgcag gctccgcgtc gcggggcggg aggcgtgatg agcgatatgc ggcgtgaacg
     2521 gcgggtcgat ccggccggcg tcgtgatcgc ggtcgtcctg ttcggggcgg cggcggtgat
     2581 ctggtgggac atgaccaccc ttcagatctc gtcggtttac ggcgtcgggc ccaaggcgat
     2641 gccgatcgtt gtcgcgacgg ggctcgccct gctcgcggtc ggcaatctca tcacggcgtt
     2701 gcgcggcgat cttccgccgc gggagagcgc cgctgccgga ccggttctcc tgatcctggt
     2761 cgggctcgcg gcgctgattg ccgcgatcgc cttcggcggc ggcttcattc cgggcatgac
     2821 gatcctgttc gccacgaccg cgacggcgtt cggccgccgc gccgtgctga tcgatctggt
     2881 cattggcttc gtcctggcga cggtcgtcta tctcctcttc gtcaagcttc tcaccctctc
     2941 gttacctgtg ggcccgctcg aacgcctcct ctgaggatcc catggatgcc ctatcgtcgc
     3001 ttgcgcaggg tctcgcggtc gctgtccagc cgcacaatct tctcttcgcc ctgatcgggg
     3061 tgctgctcgg taccgccgtc ggggtgctgc ccggcatcgg cccggcgctg accgtcgcgc
     3121 tgctgctgcc gatcacctac aagctcgatc ccggcggctc gctgatcatg ttcgccggca
     3181 tctattacgg cggcatgtac ggcggctcga ccacggccat cctgatcaac acgccaggcg
     3241 agagcgcctc gatggcgacc gcgctggagg gcaaccggat ggccaaggcg ggccgcggcg
     3301 gccctgcgct cgcgaccgcc gccatcggct ccttcgtggc cggcaccatt gcgaccctcg
     3361 ggctcacctt cctggccccg tggctggtcg aagtggccgt gcggttcggg ccggaagact
     3421 atttcgcgct gatgtgcgtc gccttcatca ccgtctcggc gaccttcggc gggtcgccgg
     3481 tgcgcggcct gaccagcctt ttcatcgggc tcatgcttgg cctcgtcggc atcgaccggc
     3541 tcacgggcca ggcgcgcctc accttcggca ttccggagct gctcgacggc gtcgagatca
     3601 ccaccctggc ggtcgggctc ttcgccgtgg gcgaagcgct tttcgtggtc tcgcgccggc
     3661 accacaccaa ggaggagctg attccggtgc gcgggtccct gtggatgacc gcgcaggact
     3721 ggtcgcgctc atggaagcca tggctgcgcg gcacgctgtt cggattcccg atcggcgcct
     3781 tgccggcggg aggcgccgag attccgacct tcctgtccta ctcgacggaa aaacgcctta
     3841 ccaaacaccc ggaggagttc ggacgcggtg ccatcgaagg ggtggccggc ccggaggccg
     3901 ccaacaacgc ctccgccgcc ggcaccctcg tgccgctcct caccctcggc ctgccgacat
     3961 cggccacgg
//
LOCUS       DATAIQ010000421         1545 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_22159, whole genome shotgun sequence.
ACCESSION   DATAIQ010000421 DATAIQ010000000
VERSION     DATAIQ010000421.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1545)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1545)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1545
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_22159"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1545
                     /locus_tag="VHN20_07030"
     CDS             <1..>1545
                     /locus_tag="VHN20_07030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012333450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004352 - glutamate dehydrogenase (NAD+)
                     activity [Evidence IEA];
                     GO_process: GO:0019551 - glutamate catabolic process to
                     2-oxoglutarate [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD-glutamate dehydrogenase domain-containing
                     protein"
                     /protein_id="HEX2725556.1"
                     /translation="LANVLESYPRDELFQINEDTLYRFAIDIMNLMERPRVRALARPD
                     EFDRFVSVLVFIPKDRYDTNVRRRVGEFLAGVFRGRLSAAYPAYPEGALARTHYIIGR
                     DEGTTPVVDRAALEQGIIAITQTWSDRLAEALADAVGGRRARALAARYANAFNAAYRE
                     AFDVDRALDDIEILERLSDARPRAVDLYRREGDPDTRINLKVFSRGTALPLSERVPLL
                     ENLGFRVLNERTYRVTPAGAPHDERIWLHDMALERVTGESIDIGAIEGPIEATLLALF
                     RGLAESDGFNRIVLEAELGWRDVAMVRTLGRYLRQIGVPFGLNYVATTLARHPAVTKA
                     VVALFYARFDPRLDSASRETAERAIRGEIEKLLNDVTSLDEDRILRRFLNLVEACVRT
                     NFFQIGQNGLPVETIAFKFEGARVEELPRPRPLFEIFMNSPRLEALHLRFGKVARGGI
                     RWTDRPQDFRTEILGLVKAQQVKNAVIVPVGAKGGFVPKLLPPASDRQAWLTEGTESY
                     RIFVRTL"
BASE COUNT          235 a          555 c          495 g          260 t
ORIGIN      
        1 gcttgccaac gtgctcgaaa gctacccgcg cgacgagctg tttcagatca acgaggacac
       61 gctttaccgt ttcgccatcg acatcatgaa cctgatggag cggccgcgcg ttcgcgccct
      121 ggcgcgcccg gacgagttcg accgcttcgt ctcggttctc gtgttcattc ccaaggatcg
      181 ctacgacacc aacgtgcgcc gccgggtcgg ggagtttctc gccggtgtct ttcgcggccg
      241 cctttcggcc gcgtatccgg cctatcccga aggcgcgctg gcgcgcacgc actacatcat
      301 cggccgcgac gaagggacga cgccggtcgt cgaccgggcc gcgctcgagc agggcatcat
      361 cgccatcacg cagacgtgga gcgaccgcct tgccgaagcg ctcgccgatg ccgtcggggg
      421 ccgccgtgcc cgcgccctcg ccgcgcgcta tgcgaatgcg ttcaacgccg cctatcgcga
      481 ggccttcgac gtcgaccgcg ccctcgacga catcgagatc ctcgagcgct tgtccgacgc
      541 acggccgcgc gccgtcgacc tgtaccggcg cgaaggcgat ccggacacgc gcatcaacct
      601 gaaggtcttc tcgcgcggca cggcgctgcc actctccgag cgggtgccgc tgctggagaa
      661 tctcggcttc cgcgttctca acgagcgcac ctatcgcgtc acgccggccg gcgcaccgca
      721 tgacgagcgc atctggctgc acgacatggc gctcgagcgc gtcaccggtg agagcatcga
      781 catcggcgcg atcgaggggc cgatcgaggc cacgctgctg gcgttgttcc gtgggcttgc
      841 ggagtccgac ggcttcaacc gcatcgtgct cgaggccgag ctcggctggc gcgacgtcgc
      901 gatggtgcgc acgctcggcc ggtatctgcg gcagatcggc gttcccttcg ggctcaatta
      961 cgtcgccacg accctcgccc gccatcccgc ggtcacgaag gcggtcgtgg ctctgttcta
     1021 tgcccgcttc gatccgcgtc tcgacagcgc gtcgcgcgag acggccgaac gtgccatccg
     1081 cggcgagatc gaaaagctcc tcaatgacgt gacgagcctc gacgaggatc gcatcctgcg
     1141 gcgcttcctc aacctcgtcg aggcgtgcgt tcggaccaac ttcttccaga tcggccagaa
     1201 cgggcttccg gtcgagacga tcgcgttcaa attcgaagga gcgcgtgtcg aggagctgcc
     1261 gcgcccgcgc ccgctcttcg agatcttcat gaactcgccc cggctcgagg cgctgcatct
     1321 gcgcttcggc aaggtcgcgc gcggcggcat ccgctggacg gaccggccgc aggatttccg
     1381 caccgagatc ctcggcctcg tgaaggcgca gcaggtcaag aacgccgtca tcgtgccggt
     1441 gggcgccaag ggcggcttcg tgccaaagct cctgccgccg gcctccgacc gccaggcctg
     1501 gctcactgag ggcacggaga gctaccgcat cttcgtgcgc accct
//
LOCUS       DATAIQ010000422         3082 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_22160, whole genome shotgun sequence.
ACCESSION   DATAIQ010000422 DATAIQ010000000
VERSION     DATAIQ010000422.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3082)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3082)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3082
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_22160"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..381
                     /locus_tag="VHN20_07035"
     CDS             <1..381
                     /locus_tag="VHN20_07035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008966341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725557.1"
                     /translation="LKTIGFTHVCVSSGGISLKARIPLGPGYQVPFAAKVKAETGIVT
                     RAVGLIADPHQAEEIVATGQADMVALARGLLDNPRWPWHAAEALGADLARPPQYERAR
                     PALWPGAAIARRPPQATPRIARVG"
     gene            484..1461
                     /locus_tag="VHN20_07040"
     CDS             484..1461
                     /locus_tag="VHN20_07040"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018698491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEX2725558.1"
                     /translation="MKTRRLGQLDVSAIGLGCMSMTPIYGEPSEPEAIATVHRAVELG
                     VTLVDTSDAYAFGANEELVGRAIKGIRDKVVLATKFGNIRLPDGKTDVNGKPDYVPQA
                     CEASLRRLGVDVIDLYYIHRIDASVPIEETVGALARLVEQGKVRHLGISEAGANTVRR
                     AHATHPLAALQTEYSLWSRDPEPELLDTCAELGIGYVAYSPLGRGFLTGTITNLELLG
                     AKDRRRDMPRFQGDNLNKNVGLLETLKSLAAKENCTPAQLALAWLLAKRDFVVPLPGS
                     KQRRWLEENAAAADVKPSRETLAALDRAFPPGAAAGTRYPEPQMKRLGI"
     gene            1687..2682
                     /locus_tag="VHN20_07045"
     CDS             1687..2682
                     /locus_tag="VHN20_07045"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEX2725559.1"
                     /translation="MVWPVMLRLIAAVPGLAVTPIAQSLELQWPVACTIGADCVIQNY
                     VDHDASRDAQDYTCGTLSYDQHNGTDIRLRGLARQKAGVDVLAAADGTVLRVRDGVPD
                     VPVRSAEAVDVRVRQCGNGVVIAHDDDIETQYCHLAQGSVRVRPGTRVQAGAPVGRIG
                     LSGATEYPHLHFTVRRGGKVIDPFAVDAAPGACGSGTSLWAGPLRAKLAYKPSAVLNT
                     GFAPGPVTMAEIESGDAGRRRLEASAPAIVAFARAIGLKQGDVQRLKVTAPDGTVVAE
                     SAAPPLDRDKAQWMMSTGRKRPEQGWPAGTYSATYEVTRGSTTALQETFSVAVVP"
     gene            complement(2774..>3082)
                     /locus_tag="VHN20_07050"
     CDS             complement(2774..>3082)
                     /locus_tag="VHN20_07050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006339925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEX2725560.1"
                     /translation="GFCPMGPCVVTADEVSDVTKLRLETRLNGELRQNADVSDLIFDI
                     PTLIETISAVMTLEPGDLIATGTPVGVGIGFKPPKFMKPGDTVSVTIEPIGTLTNPVA
                     "
BASE COUNT          496 a         1066 c         1054 g          466 t
ORIGIN      
        1 ctcaagacca tcggcttcac gcatgtctgc gtgagctcgg gcggcatcag cctgaaggcg
       61 cgcatcccgc ttggccccgg ctatcaggtg ccgttcgcgg cgaaggtcaa ggccgagacc
      121 ggcatcgtca cccgcgccgt gggcctgatc gccgacccgc atcaggccga ggagatcgtc
      181 gccacaggcc aggccgatat ggtggcgctc gcccgcggcc tgctcgacaa cccgcgctgg
      241 ccctggcacg cggccgaggc gctcggtgcc gacctggcgc gcccgccgca atacgagcgc
      301 gccaggccgg cgctgtggcc cggcgcggcg atcgcgcggc ggccccccca ggcgacgccg
      361 cgtatcgcca gggtcgggtg agcggggcgc cttcccgcga atctgtgatc cgcccaatat
      421 tgtcgccggt gaagcgcgtg cggtaagaga cgggccgcaa aaacgcccat gggaggagca
      481 aggatgaaga cacgccggct gggtcaactc gacgtatccg ccatcggcct cggctgcatg
      541 agcatgacgc cgatctacgg cgagccgagc gagcccgagg cgatcgcgac ggtgcaccgc
      601 gccgtcgagc tcggcgtgac gctggtcgat acgtccgatg cctacgcgtt cggtgccaac
      661 gaggagctgg tcggccgcgc catcaagggc atccgagaca aggtggtcct cgccacgaag
      721 ttcggcaaca tccgcctgcc cgacggcaag acggacgtga acggcaagcc cgattacgtg
      781 cctcaggcct gcgaggcgag cctgcgccgg ctcggcgtcg acgtgatcga tctctactac
      841 atccaccgca tcgatgcctc ggtgccgatc gaggaaacgg tcggcgcgct ggcgcggctc
      901 gtcgagcagg gcaaggtgcg ccatctcggc atctcggaag caggcgcaaa taccgtgcgc
      961 cgcgcccacg ccacgcatcc gctggccgcg ctgcagaccg aatattcgct ttggtcgcgc
     1021 gatcccgaac ccgagctcct cgacacctgc gccgagctcg gcatcggcta cgtcgcctac
     1081 agcccgctcg gccgcggctt cctcaccggc acgatcacca atctcgagct gcttggcgcg
     1141 aaggaccggc gccgcgacat gccgcgcttc cagggcgaca acctcaacaa gaatgtcggc
     1201 ctgctcgaga cgctgaaatc gctggccgcc aaggagaact gcacgccggc gcagcttgcg
     1261 ctcgcctggc tgctggctaa gcgcgacttc gtcgtgccgc tgcccggctc caagcagcgc
     1321 cgctggctcg aggagaacgc cgccgccgcc gacgtcaagc cgtcgcgcga gacgctggcg
     1381 gcgctcgatc gcgcctttcc gcccggcgcc gcggccggca cacgataccc cgagccgcag
     1441 atgaagcgcc tcgggatctg agcctgtcgc atcggcgaag gggttcaggt tcgcgggttc
     1501 agattcgcag aagatgcgtc tcgagaaacg cgggggccat ttccacttgg gtggaaccgg
     1561 ctccgcgccg cttgcgtctc ggacgtgctc tcgccatgtc cttcattcgt tcgcgttacg
     1621 gccccgatcc ggtcaccact ttgatttcac cgtgatgcgc ccgtgatgct accgtgaggt
     1681 ctgttcatgg tttggcccgt catgttacgc ctcatagccg ccgtgcctgg gctggccgta
     1741 acgccgatcg cgcaaagcct ggagctgcaa tggccggtcg cctgcaccat aggcgccgat
     1801 tgcgtcatcc agaactacgt cgatcatgac gcatcgcgtg acgcgcagga ctatacgtgc
     1861 ggcacgctca gctacgatca gcacaacggc accgacatca ggctgcgcgg cctcgcgcgg
     1921 cagaaggccg gggtcgacgt gctcgcggcc gccgacggca cagtgctgcg cgtgcgcgac
     1981 ggcgttccag acgtgccggt gcggagcgcc gaggcggtcg acgtgcgcgt gcggcagtgc
     2041 ggcaacggcg tcgtgatcgc ccacgatgac gacatcgaga cgcaatactg ccatctggcg
     2101 cagggcagcg tcagggtgcg gccgggaacc agggtgcagg ccggggcgcc cgtcggccgc
     2161 atcggcctgt ccggcgcgac cgaatatccg catctgcatt tcacggtgcg gcgcggcggc
     2221 aaggtcatcg acccgttcgc ggtcgatgcg gcgcccggtg cgtgcgggtc gggcacatcg
     2281 ctgtgggccg ggccgctgcg cgcgaaactc gcctataagc cgagcgccgt gctcaacacc
     2341 ggcttcgcgc ccggcccggt gaccatggcg gagatcgaga gcggcgatgc cggccggcgc
     2401 cggctggaag catccgcccc cgccatcgtc gccttcgcgc gcgccatcgg cctcaagcag
     2461 ggcgacgtgc agcggctcaa ggtcacggct cccgacggca ccgtcgtcgc cgagagcgcc
     2521 gcgccgccgc tcgaccgcga caaggcgcaa tggatgatgt ccaccggccg gaagcgcccg
     2581 gagcagggct ggccggcggg cacctacagc gcgacctacg aggtgacgcg cggcagcacc
     2641 acggcgctgc aggagacgtt ctcggtcgcg gtggtgccgt agaatcatct ctcccaacgc
     2701 aaatcgggtg ttcccgattt gcgcatttcg agtgctggat ctcgggaaca cccgagatcc
     2761 agggagaggc ttattacgcc accggattgg tgagcgtgcc gattggctcg atggtgaccg
     2821 agacggtgtc gccgggcttc atgaatttcg gcggcttgaa gccgatgccg acgccgacgg
     2881 gcgtgccggt ggcgatcagg tcgccgggct cgagcgtcat caccgccgag atcgtctcga
     2941 tcaacgtcgg gatgtcgaag atcaggtcgc tcacgtcggc gttctggcgc agctcgccgt
     3001 taaggcgcgt ctcgaggcgc agcttcgtga cgtccgacac ctcgtcggcg gtgacgacgc
     3061 acgggcccat cgggcagaag cc
//
LOCUS       DATAIQ010000423         3111 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_391201, whole genome shotgun sequence.
ACCESSION   DATAIQ010000423 DATAIQ010000000
VERSION     DATAIQ010000423.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3111)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3111)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3111
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_391201"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..221)
                     /locus_tag="VHN20_07055"
     CDS             complement(<1..221)
                     /locus_tag="VHN20_07055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011440335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)(+) transhydrogenase (Re/Si-specific)
                     subunit beta"
                     /protein_id="HEX2725561.1"
                     /translation="MSANLAALLYLTSGVLFILALRGLSHPETSRQGNLFGMVGMGLA
                     IATTLVGAPPSGFFGWVLTLLGLAVGGGIG"
     gene            complement(226..654)
                     /locus_tag="VHN20_07060"
     CDS             complement(226..654)
                     /locus_tag="VHN20_07060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019403306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proton-translocating transhydrogenase family
                     protein"
                     /protein_id="HEX2725562.1"
                     /translation="MSSDTPQQLLDRAQAAARAASQLADQAASSLGAAAHAATHGAVD
                     PTVFQFAIFVLAIFVGYYVVWSVTPALHTPLMSVTNAISSVIVVGALLATGVPLVRAI
                     GDGPVWARVLGFIALILASINIFGGFLVTQRMLAMYKKKG"
     gene            complement(673..1812)
                     /locus_tag="VHN20_07065"
     CDS             complement(673..1812)
                     /locus_tag="VHN20_07065"
                     /EC_number="1.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008746 - NAD(P)+ transhydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit alpha"
                     /protein_id="HEX2725563.1"
                     /translation="MRIAVPSEAEAGEARVAATPETVKKFKALGADVVVETGAGSGSG
                     IPDAEYEAAGATVAPDARGALQEADVVLKVRRPTETELQAVRRGALVVATMDPYGQDA
                     ALKAMADAGVAAFAMELMPRITRAQVMDVLSSQANLAGYRAVIDASAEYGRAFPMMMT
                     AAGTVPAARVFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVESLGGKFIAVED
                     EEFKQAETAGGYAKEMSKDYQAKQAALVAAHIAKQDIVITTALIPGRPAPKLVSREMV
                     DSMRPGSVIVDLAVERGGNVELSKAGEVVHHKGVKLIGHLNLPGRLAASSSHLYARNL
                     YAFVETLIDKTTKDLAVKWDDELVKATCLTRDGAIVHSAFQPGTA"
     gene            complement(1881..2174)
                     /locus_tag="VHN20_07070"
     CDS             complement(1881..2174)
                     /locus_tag="VHN20_07070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aa3-type cytochrome c oxidase subunit IV"
                     /protein_id="HEX2725564.1"
                     /translation="MADTKHAPFMGYSPDMDGPNHEAMYRNFVHFTAVAVVFVLCCVV
                     ALAVGGIKQGWLSAIVGVVLAHVAAAIGLFAPSVSWRAPAVVLALLMLMLIFY"
     gene            complement(2331..>3111)
                     /locus_tag="VHN20_07075"
     CDS             complement(2331..>3111)
                     /locus_tag="VHN20_07075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010682606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AarF/UbiB family protein"
                     /protein_id="HEX2725565.1"
                     /translation="REARHVRLYQQALAEVPEVRVPSLWLELSTRRLLTLGWLDGVKI
                     LQFTEAASEIRNRLAVAMFKAWWHPFSHIAVIHGDPHLGNYTVFSDGGEARGINLLDY
                     GCIRIFPPSFVGGVVDLYHGLLHDDRDRIVHAYEVWGFKRLNRELIDVLNIWARFIYG
                     PLLDDRVRTIADGVKPSEYGRRQAFQVHRALKEKGPVTVPREFVFMDRAAIGLGGVFL
                     HLKAELNFHRLFESEIERFALAELATRQAEALAQAGLPKPA"
BASE COUNT          505 a         1063 c         1066 g          477 t
ORIGIN      
        1 ccgatgccgc cgccgacggc cagcccgagc agcgtcagga cccagccgaa gaatcccgac
       61 ggcggcgcgc cgacgagcgt cgtggcgatg gccagcccca tgccgaccat gccgaagaga
      121 ttgccctgcc gcgacgtctc cgggtgcgac aggccgcgca gggcgagaat gaagaggacg
      181 ccggaggtca gatagagcag ggctgcgagg ttcgctgaca tcgcctcagc ccttcttttt
      241 gtacatggcc agcatgcgct gcgtgaccag gaagccgccg aagatgttga tcgaggcgag
      301 gatcagggcg atgaagccga gcacgcgcgc ccataccggc ccgtcgccga tggcgcgcac
      361 gaggggcacg ccggtcgcga gcagcgcgcc gaccacgatc acggacgaga tggcgttggt
      421 gacggacatc agcggcgtgt gcagcgccgg cgtcaccgac cagacgacgt aatagccgac
      481 gaagatggcg agcacgaaga tcgcgaactg gaagaccgtc gggtcgaccg cgccgtgcgt
      541 cgccgcatgc gccgcggcgc cgagcgacga ggccgcctgg tcggcgagct ggctcgcggc
      601 gcgcgccgcc gcctgcgccc ggtcgaggag ctgctgggga gtgtcgctgg acatggctgg
      661 aagctcctcc ggtcaggccg ttccgggctg aaaggccgaa tggacgatgg cgccgtcgcg
      721 cgtgagacag gtcgccttga ccagctcgtc gtcccatttg acggccaggt ctttcgtcgt
      781 cttgtcgatc agggtttcga cgaaggcgta gaggttgcgc gcgtagagat gcgacgacga
      841 ggcggcgagc cggcccggca ggttgaggtg gccgatgagc ttcacgccct tgtggtgcac
      901 cacttcgccg gccttcgaca gctcgacatt gccgccgcgc tcgaccgcga gatcgacgat
      961 caccgagccg gggcgcatcg aatccaccat ctcgcgcgag acgagcttcg gcgccgggcg
     1021 gccggggatc agcgccgtcg tgatgacgat gtcctgcttg gcgatatgcg cggcgacgag
     1081 cgccgcctgc ttggcctgat agtccttcga catctccttg gcgtagccgc cagcggtctc
     1141 ggcctgcttg aactcctcgt cctcgacggc gatgaacttg ccgccgagcg actcgacctg
     1201 ctccttggcg gccggccgca cgtcggttgc gctgacgacg gcgccgaggc gccgcgccgt
     1261 cgcgatcgcc tgcaggccgg cgacgccggc gcccatcacg aacacccggg ccgccggcac
     1321 ggtgccggcg gcggtcatca tcatcggaaa ggcgcggccg tattccgccg atgcgtcgat
     1381 cacggcccgg tagccggcga ggttcgcttg gctcgacagg acgtccatca cctgcgcccg
     1441 cgtgatgcgc ggcatcagct ccatggcgaa ggcggcgacg ccggcatcgg ccatcgcctt
     1501 gagggccgcg tcctgcccat acgggtccat ggtggcgacg acgagggcgc cacgccggac
     1561 cgcctggagc tcggtctcgg tcgggcgccg caccttgaga acgacgtccg cctcctgcag
     1621 cgcgccccgc gcgtcgggag cgaccgttgc gccggcggct tcatattcgg cgtccggtat
     1681 gcccgagccg gacccggcgc cggtctcgac gacgacatcg gcgccgagcg ccttgaattt
     1741 cttgacggtc tccggcgtcg cggcgacgcg cgcctcgcct gcttcggctt ccgacggaac
     1801 tgcgatccgc atcaggcccc cctggttcgc ggctgcgacc cgctcacgtc acgcgagggt
     1861 cgcggacggc gtgcattggc tcaatagaag atcagcatga gcatcagcag cgcaagcacc
     1921 acggcgggcg cccgccacga gaccgatggc gcgaacaggc cgatggcggc ggcgacgtgc
     1981 gcgaggacga cgccgacgat ggccgatagc cagccttgtt tgatgccccc gaccgccagc
     2041 gccaccacgc agcacaggac gaacacgacc gccacggcgg tgaaatggac gaagttccga
     2101 tacatggcct cgtggttcgg gccatccatg tcgggactgt aacccataaa cggcgcgtgc
     2161 ttcgtgtccg ccatcgttga tcctatcgtg acttggctgc ggcggcttta gcgcatgcgc
     2221 tcaagcgctg caatcgctgc tattcctccc acgcatgccc gcccggtttt ctcaagcgct
     2281 ttcttcaggc gcccgccccg gacgccttga gaggaatagt ttccctcaag ctaggcgggc
     2341 ttcggcagcc cggcttgcgc cagggcctcc gcctgccgtg tcgcgagctc ggcgagggcg
     2401 aagcgctcga tctcgctctc gaacaggcgg tggaaattca gctcggcctt gaggtgcagg
     2461 aacacgccgc cgagtccgat ggcggcgcgg tccatgaaca cgaattcgcg cggcaccgtc
     2521 accgggcctt tctccttgag cgccctgtgc acctggaaag cctggcggcg gccgtattcg
     2581 gaaggcttga cgccgtcggc gatggtgcgg acgcgatcgt cgagcagcgg cccgtagatg
     2641 aagcgcgccc agatgttgag gacgtcgatc agctcgcggt tgaggcgctt gaatccccac
     2701 acctcgtagg cgtgcacgat gcggtcgcgg tcgtcgtgca gcaggccgtg atagaggtcg
     2761 acgacgccgc cgacgaagct cggcggaaag atccggatgc agccgtaatc gagtaggttg
     2821 atccccctcg cctcgccgcc gtccgagaac accgtgtaat tgccgagatg cggatcgcca
     2881 tggatgaccg cgatgtggct gaacgggtgc caccacgcct tgaacatcgc cacggcgagc
     2941 cggttgcgga tctcggacgc cgcctcggtg aactgcagga tcttgacccc gtccagccat
     3001 ccgagcgtga gcaggcgccg cgtcgacagc tccagccaca gggacggcac ccgcacctcc
     3061 ggcacctcgg ccaacgcctg ctggtagagg cgcacatgcc tggcctcccg c
//
LOCUS       DATAIQ010000424         1677 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_437269, whole genome shotgun sequence.
ACCESSION   DATAIQ010000424 DATAIQ010000000
VERSION     DATAIQ010000424.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1677)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1677)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1677
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_437269"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..386
                     /locus_tag="VHN20_07080"
     CDS             <1..386
                     /locus_tag="VHN20_07080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725566.1"
                     /translation="AYPIGFGTDSKLYYHEKTSGANGAALSWSIETGYMDLQDGDTLA
                     DLVGMIPDFEDQIGNLSLTISAKLYPNGSETTHGPYTITPTTTQVDFRVCARQAKYKF
                     SGSATATFARMGAPSFDIQPGGARR"
     gene            383..775
                     /locus_tag="VHN20_07085"
     CDS             383..775
                     /locus_tag="VHN20_07085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725567.1"
                     /translation="MTPGPGPAARSPLINHFERCRPWLEAALAHSVGGYDIDDVRAAI
                     ETGTAQFWPTRNSAAVTTIDTFPGGLKVLQFWLAGGSLAELALTEANVLAWARTLGCG
                     KAVIIGRAGWQRRLEGYRDAGRILVKDL"
     gene            777..1622
                     /locus_tag="VHN20_07090"
     CDS             777..1622
                     /locus_tag="VHN20_07090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725568.1"
                     /translation="MSGLFSKGPKTQTTTQVQSVPPYVQQAQETLLNYGSALARPFVS
                     RPAAPNQVAPLSRDQQTAFSMARDVARIAGRQGPTLTRTPQAVAAQLTARDIAAFSNP
                     YEDQVVQTTLGDMQRQHGENLTAARARMAAGGAFGGSRQAIMESQMERNFDDTAARTV
                     ADLRRQGFDTAANLGMGNVQLRQQAAMLNPALTLQAAALRNNLANDQQTRRLQAAMNL
                     SGMGGLQQNLAQRQIDVPWTVLERMRSITPGATGGTTTTTQPLNQPSPLQTALSLGVL
                     GLGLL"
BASE COUNT          284 a          605 c          558 g          230 t
ORIGIN      
        1 atgcgtatcc gatcggcttc ggcacggact cgaagctcta ctaccatgag aagacgagcg
       61 gcgcgaacgg cgccgcgctg tcgtggtcga tcgagaccgg ctacatggac ctccaggacg
      121 gcgacacgct cgccgacctc gtcggcatga tcccggattt cgaggaccag atcggcaacc
      181 tctcgctcac catctccgca aagctctacc cgaacggcag cgagacgacg cacggccctt
      241 acacgatcac gccgacgacg acgcaggtcg acttccgcgt ctgcgcgcgc caggcgaaat
      301 acaaattctc cggctccgcc acggcgacct tcgcgcgcat gggcgcgccg agcttcgaca
      361 tccagccggg cggggcgcgg cggtgacgcc cggaccaggt ccggcggcac ggtctccgct
      421 cataaatcat ttcgagcgct gccggccgtg gctcgaggcg gcgctcgcgc attcggtcgg
      481 cggctacgac atcgatgacg tgcgcgccgc catcgagacg ggcacggcgc agttctggcc
      541 gaccaggaat tcggcggcgg tgacgaccat cgacacgttc ccgggcggcc tcaaggtgct
      601 gcagttctgg cttgccggcg gttcgctcgc cgagctcgcg ctcacggagg cgaacgtgct
      661 cgcctgggcg cgcacgctcg gctgcggcaa ggccgtgatc atcgggcgcg ccggctggca
      721 gcgccggctc gaaggctacc gcgacgccgg ccgcattctg gtgaaggacc tttgacatgt
      781 caggcttgtt cagcaagggc ccgaagacgc agacgacgac ccaggtccag tcggttccgc
      841 cctacgtgca gcaggcgcag gagacgctgc tcaactacgg ctcggcgctc gcgaggccgt
      901 tcgtgtcgcg cccggcggcg ccgaaccagg tggccccgct ctcgcgcgac cagcagaccg
      961 cgttcagcat ggcgcgtgac gtggcgcgca tcgccggacg gcaggggccg acgctcaccc
     1021 gcacgccgca ggccgttgcc gcgcagctca cggctcgcga catcgcggcc ttcagcaatc
     1081 cgtatgagga tcaggtcgtg cagacaacgc tcggcgacat gcagcgccag cacggcgaga
     1141 atctgaccgc ggcgcgcgcc cgcatggccg cgggcggcgc cttcggcggc tcgcgccagg
     1201 cgatcatgga aagccagatg gagcgcaatt tcgacgacac cgccgcgcgc accgtcgccg
     1261 atctcaggcg tcagggcttc gacaccgccg ccaatctcgg catgggcaac gtgcagctgc
     1321 gccagcaggc ggccatgctc aatccggcgc tcacgctgca ggcggccgcc ttgcgcaaca
     1381 acctcgccaa cgaccagcag acgcggcgcc tgcaggcggc catgaacctg tccggcatgg
     1441 gcgggctgca gcagaacctg gcgcagcgcc agatcgacgt tccgtggacg gttctcgaac
     1501 gcatgcgctc gatcacgcca ggcgcgaccg gcggcacgac cacgacgacg caaccgctca
     1561 accagccgag cccgctgcag acggcgctgt cgctcggcgt cctcggcctg gggctgctgt
     1621 gatgttcgcg atcttcagaa accccgacgc tccggcaaac gggctcatca gcggacc
//
LOCUS       DATAIQ010000425         5697 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_437307, whole genome shotgun sequence.
ACCESSION   DATAIQ010000425 DATAIQ010000000
VERSION     DATAIQ010000425.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 5697)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5697)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5697
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_437307"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..793)
                     /locus_tag="VHN20_07095"
     CDS             complement(<1..793)
                     /locus_tag="VHN20_07095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725569.1"
                     /translation="MPGGWRAFRVVRQATAVAGGLALASVAQTAFGQPAVEQFYSGRK
                     IDMIIGYTPGGTYDLYARLVARHMGKHIPGKPSIVPRNMPGGGSRVAATWVYEAAPRD
                     GTVLATADQALPVEQAMGDKQLRVDTTRLNYIGNPIAGNNTTVTWHTSGVKTIEDARR
                     VEVPVGATGASTSSQYPRAMNALLGTKFKIILGYPGANDINLAMERGEVAGKGSDSWT
                     AWKATRPDWLRDKKINILVQIGLTKEPDLPDVPLMMELARNADDRA"
     gene            921..1463
                     /locus_tag="VHN20_07100"
     CDS             921..1463
                     /locus_tag="VHN20_07100"
                     /inference="COORDINATES: protein motif:HMM:TIGR02444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02444 family protein"
                     /protein_id="HEX2725570.1"
                     /translation="METRDKQNSPFWWFSLKLYAERDFAGACLALQDRHGVDVNVLLF
                     LLWAAQHGRRIEEDGVRAIVASVDAWRQAVVVPLRTARRFLRTPPADIQAGAATALRQ
                     RVQEAELEAERLQQEMLYRLFPIEPRTQPEPFRDAFASVNLKSYASVLGTEFPAPLSD
                     ALLKVFLEYSRAETDQARGS"
     gene            1508..2095
                     /locus_tag="VHN20_07105"
     CDS             1508..2095
                     /locus_tag="VHN20_07105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015929889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UbiX family flavin prenyltransferase"
                     /protein_id="HEX2725571.1"
                     /translation="MTKTVPQRLIVGITGASGVVYGVRTLEILKGTGVETHLVMTKAA
                     EMTLAYETDYKPKDVRALADVNHGITNIGASISSGSFRTMGMLIVPCSVRTLGEIATG
                     VTSSLMSRAADVVLKERRRLVLGFRETPLHGGHLRAMTQLSDMGAIIAPIVPAFYSRP
                     QTVDDIINHTVGRLLDLFELDVGTVKRWKSAAEGE"
     gene            2275..4377
                     /gene="glgX"
                     /locus_tag="VHN20_07110"
     CDS             2275..4377
                     /gene="glgX"
                     /locus_tag="VHN20_07110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020173821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004133 - glycogen debranching enzyme
                     activity [Evidence IEA];
                     GO_process: GO:0005980 - glycogen catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen debranching protein GlgX"
                     /protein_id="HEX2725572.1"
                     /translation="MFRIDDGRPVPLGATYDGKGVNFALFSAHATSVELCLFDPQGRR
                     ETDRIRLPRRTDQVWHVYMEGMRPGQLYGYRVHGPYDPRHGHRFNPAKLLIDPYARQL
                     FGRIRWHDALFGYRPGAHRADLTIDRRDSAPMMPKCVVEDPTHHWGDDRPPRHPGSDT
                     IIYEAHVKGFTKLHPDLPAGLRGTYDALGHPAVIEHLVRLGVTTLELLPIHAFADDRF
                     LVEKSLRNYWGYSPVAYFAPEPRYLGDAGVVGLKSAVRALHDAGIEVVLDVVYNHTAE
                     GNHLGPTLSFRGIDNAVYYKLSPENPRHNWDCTGTGNTLDLDHPRVLQMVTDSLRCWV
                     DTYHVDGFRFDLASALARTPFDFSQRAAFLQACLQDPVLSRVKLIAEPWDVGSGGYQV
                     GGFPIPFSEWNDQFRDTARAFWRSDPGQLPKLAQVMTGSREIFGPSGRGTWASVNFVT
                     AHDGFTLQDLVSYNERHNEANGENNQDGHAHNVSWNGGVEGPTGDPEILELRARQKRN
                     LIATVLLSQGMPMLLMGDELSRTQGGNNNAYAQDNEISWMNWQDDDPDPDFLTFVQTL
                     IALRKRHDAFRRRDFLTGAIVPANRLKDVYWLAPEGREMTTEDWAEGLRRTLGMQLGN
                     DAPDGQRFLILLNAAPEAVEFHLAGQPEGRWVQVFDTTLAQGLVRGAPTVVRSGGTFP
                     LEPRSLVLFQYSGAAGQH"
     gene            4377..>5697
                     /gene="treZ"
                     /locus_tag="VHN20_07115"
     CDS             4377..>5697
                     /gene="treZ"
                     /locus_tag="VHN20_07115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003598956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016798 - hydrolase activity, acting on
                     glycosyl bonds [Evidence IEA];
                     GO_process: GO:0005992 - trehalose biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malto-oligosyltrehalose trehalohydrolase"
                     /protein_id="HEX2725573.1"
                     /translation="MRRAHSMPFGAELTSGGVRFALWAPTARDVALVLDGAEHAMPHD
                     GDGWRRLVVPTAHAGSRYQYRIDGDLLVPDPASRFQPDDVSGPSAVIDPTAYAWADAG
                     WRGRPWEEAVLYEVHVGTATPEGTYAGLAGKLEDLRDLGVTAIELLPLSDFPGARNWG
                     YDGVLPFAPDASYGTPDDLKALVDRAHALGLMIFIDVVYNHFGPAGNYLHSYAGSFFT
                     ERHQTPWGAGINFDGAASRPVRDFFIHNALYWLQEFHVDGLRFDAVHAILDDSEHHVL
                     AEIAEHARAALPGREVHLVLENDANQARFLRREPDGHPALYTAQWNDDLHHCWHTLLT
                     GEDDGYYVDYADEPVRRLGRCLAEGFAYQGEPSAHRNGEARGEPSAHLPPAAFVSFLQ
                     NHDQIGNRALGERISHLAPPERLALARAGVLLAPHVPMLYMGEEWDAS"
BASE COUNT          892 a         2026 c         1826 g          953 t
ORIGIN      
        1 cggcgcggtc gtcggcattg cgggccagct ccatcatcag gggcacgtcg ggaaggtccg
       61 gctccttcgt gaggccgatc tggacgagga tgttgatctt cttgtcgcgc agccagtcgg
      121 gccgggtcgc cttccaggcg gtccagctgt ccgagccctt gcccgccacc tcgccgcgct
      181 ccatcgccag gttgatgtcg ttggcgccgg gatagccgag gatgatcttg aacttcgtgc
      241 cgagcagcgc gttcatggcc cgcggatatt gcgaggacgt gctggcgccg gtcgcgccga
      301 cgggcacctc gacgcgcctg gcatcctcga tcgtcttcac cccggaggtg tgccaggtca
      361 cggtcgtgtt gttgccggcg atcggattgc cgatgtagtt cagccgggtc gtgtcgaccc
      421 ggagctgctt gtcgcccatg gcctgctcga cgggcagggc ctggtcggcg gtggccagca
      481 ccgtgccgtc ccggggcgcg gcctcgtaga cccaggtggc ggcgacgcgg ctgccgccgc
      541 cgggcatgtt gcgcggcacg atcgacggct tgccggggat gtgcttgccc atgtgccggg
      601 cgaccagacg cgcataaagg tcgtaggtgc cgcctggcgt gtagccgatg atcatgtcga
      661 tcttgcgccc gctgtagaac tgctcgacgg cgggctggcc gaacgcagtc tgcgcaacgc
      721 tcgccagggc aagtccgccg gcgacggcgg tcgcctgacg gacgactcga aatgcacgcc
      781 acccacccgg catgatcggc tccctgcgcg attgcgtctc gccccgcacg caattcacgt
      841 gctaggggcg agcctcccat gaatcttgga cgggctcccg cccgtcgcgc cgatctgagc
      901 gcattatcga cggacgcaca atggagactc gcgacaagca gaactcgccc ttctggtggt
      961 tttccctgaa gctgtatgcc gagcgggatt tcgcgggcgc ctgcctggcc ctgcaggacc
     1021 gccacggggt cgacgtcaac gtgctcctgt tcttgctctg ggccgcgcag cacggccggc
     1081 gcatcgagga ggacggcgtg cgcgccatcg tcgcctcggt cgacgcctgg cggcaggcgg
     1141 tggtggtgcc gctgcgcacc gcccggcgct tcctgcgcac gccgcccgcc gacatccagg
     1201 cgggcgcggc gaccgccctg cgccagcgcg tccaggaggc cgagctcgag gccgagcggc
     1261 tgcagcagga aatgctctac cggctgttcc cgatcgagcc gcgcacccag ccggagccgt
     1321 tccgggacgc cttcgcgagc gttaacctta agtcctatgc ctcggtgctc gggacggaat
     1381 ttcctgcccc cttgagcgac gctttgctta aagtcttcct cgaatattcg cgggcggaga
     1441 ccgatcaggc tcgaggttcc tgagccgctt cagcaagcct tcgacaagca tcatcgcgag
     1501 acaaagagtg acgaagactg ttccgcagcg gctgatcgtc ggcatcaccg gcgcctccgg
     1561 cgtcgtctat ggcgtgcgca cgctcgagat cctcaagggg accggggtcg aaacgcatct
     1621 ggtgatgacc aaggcggccg agatgaccct cgcctacgag accgattaca agcccaagga
     1681 cgtgcgcgcg ctggccgacg tcaatcacgg catcaccaat atcggcgcat cgatctcgtc
     1741 gggctccttc cgcaccatgg gcatgctgat cgtcccgtgc tccgtgcgca cgctcggcga
     1801 gatcgcgacc ggcgtcacct cgtcgctgat gagccgagcc gccgacgtcg tcctcaagga
     1861 acggcgccgg ctcgtcctcg gcttccgcga aacgcccctg catggcggcc acctgcgcgc
     1921 gatgacccag ctgtccgaca tgggtgcgat catcgcgccc atcgtcccgg ccttctactc
     1981 gcgcccgcag accgtcgacg acatcatcaa ccataccgtc ggccgcctgc tcgacctgtt
     2041 cgagctcgac gtcggcaccg tcaagcgctg gaagagcgcg gccgaggggg agtgaccgta
     2101 aagctccctc cccgcacgca actcgggtgt tcccggcttg agcatttttt gatgcggatc
     2161 tcgggcaagc ccgagttccg tcgtaggcac gccgctcgga ccccaaagcg cggcacggcg
     2221 ttgtgacaat gggcggcgtt tctgccggcc attgtcaccc accagggtcg gggaatgttt
     2281 cggatcgacg acggccgtcc tgtgccgctc ggggcgacct acgatggcaa gggcgtcaac
     2341 ttcgccctgt tctcggcgca cgccacgagc gtcgagctgt gcctgttcga cccgcaaggc
     2401 cggcgcgaga ccgaccgcat ccgcctgccg cggcgcaccg accaggtctg gcacgtctac
     2461 atggaaggga tgcgccccgg gcagctctac gggtaccgcg tccacggccc ttacgatccc
     2521 cgccacggcc accgcttcaa tcccgccaag ctgctgatcg acccgtatgc gcgccagctg
     2581 ttcgggcgca tccgctggca cgacgccctg ttcggatacc ggccgggggc gcaccgggcc
     2641 gacctcacca tcgaccggcg cgacagcgcg cccatgatgc ccaaatgcgt cgtcgaggat
     2701 ccgacgcacc actggggcga cgaccggccg ccgcgccatc cgggcagcga cacgatcatc
     2761 tacgaggcgc atgtcaaagg cttcaccaag ctgcaccccg atcttccggc ggggctgcgc
     2821 ggcacctatg acgccctcgg ccatccggcg gtgatcgagc acctcgtcag gctcggcgtc
     2881 acgacgctcg agctgctgcc catccatgcc ttcgcggacg accgcttcct ggtcgagaag
     2941 agcttgcgca attactgggg ttattccccc gtcgcctatt tcgcgcccga gccgcgctat
     3001 ctcggcgacg ccggcgtggt cggcctgaag agcgccgtcc gcgccctgca tgatgccggc
     3061 atcgaggtcg tgctcgacgt cgtctacaac catacggccg agggcaatca cctcggtccc
     3121 accctctcct tccgcggcat cgacaacgcc gtctattaca agctgtcgcc ggagaatccg
     3181 cgccacaact gggactgcac cggcacgggc aacacgctcg acctcgacca tccgcgcgtg
     3241 ctgcagatgg tgaccgactc cctgcgctgc tgggtcgaca cgtatcacgt cgacggcttt
     3301 cgattcgatc tcgcatctgc cctggcgcgc actccgttcg acttctcgca gcgggccgcg
     3361 ttcctgcagg cctgcctgca ggatccggtc ctgagccgcg tcaagctgat cgccgagccc
     3421 tgggacgtcg gctccggcgg ctatcaggtc ggcggcttcc cgattccgtt cagcgagtgg
     3481 aacgaccagt tccgcgacac cgcgcgcgcc ttctggcgta gcgatcccgg ccagctgccg
     3541 aagctcgcgc aggtgatgac cggatcgcgc gagatcttcg ggccgtcggg ccgcggcacc
     3601 tgggcgtcgg tcaatttcgt gaccgcgcat gacggattca cgctgcagga cctcgtcagc
     3661 tacaacgagc gccacaacga ggccaacggc gagaacaacc aggacggcca cgcccacaat
     3721 gtgtcctgga atggcggcgt cgaagggccg accggcgatc ccgagatcct cgagctgcgg
     3781 gcgcggcaga aacgcaacct gatcgccacc gtgctgctgt cgcagggcat gccgatgctg
     3841 ctgatgggcg acgagctgtc gcgcacgcaa ggcggcaaca acaacgcgta tgcacaggat
     3901 aatgaaatca gctggatgaa ctggcaggac gacgatcctg atccggattt cctgaccttc
     3961 gtccagaccc tcattgcctt gcgtaagcgc cacgacgcct tccgccgccg cgatttcctc
     4021 accggagcga tcgtgcccgc caaccgcctc aaggacgttt actggctcgc gccggaaggc
     4081 cgcgagatga cgacggagga ctgggctgag ggcctgcgcc gcacgctcgg catgcagctc
     4141 ggcaacgacg cgcccgacgg gcagcgcttc ctgatcctgc tcaacgcggc ccccgaagcc
     4201 gtcgaattcc atcttgccgg acaaccggag ggccgctggg tgcaggtttt cgataccacg
     4261 ttggcgcaag gcctcgtgcg cggcgcgccg accgtggtga gatcgggcgg aaccttcccg
     4321 ctcgagcctc gttcgctggt gctgttccaa tattcaggcg cggcggggca gcattgatgc
     4381 ggcgtgccca ttccatgcca ttcggcgccg agctcactag cggcggcgtg cgtttcgccc
     4441 tgtgggcgcc gaccgcgcgg gacgtcgcgc tcgtgctcga cggcgccgag cacgccatgc
     4501 cgcatgacgg cgacggttgg cgccgcctgg ttgtgcctac ggcgcatgcc ggcagccgtt
     4561 accagtatcg catcgacggc gacctgcttg ttccggaccc tgcctcgcgc ttccagcccg
     4621 acgacgtctc cggcccgagc gccgtcatcg atccgaccgc ctatgcgtgg gccgatgccg
     4681 gctggcgcgg ccgcccctgg gaggaagcgg tgctctacga ggtgcatgtc ggcaccgcca
     4741 cgccggaagg cacctatgcc ggccttgccg gcaagctcga ggatctgcgc gatctcggcg
     4801 tcaccgccat cgagctgctg ccgctcagcg actttcccgg cgcccgcaac tggggctacg
     4861 acggcgtcct gcccttcgcg cccgatgcaa gctacggcac gcccgacgac ctcaaggcct
     4921 tggtcgaccg ggcccatgcc ctgggcctga tgatcttcat cgacgtcgtc tacaaccact
     4981 tcggcccggc cgggaattat ctccattcct atgccggctc attcttcacg gaacggcacc
     5041 aaacgccgtg gggcgccggc atcaatttcg acggcgccgc cagccgcccg gtgcgcgact
     5101 tcttcatcca caacgcgctc tactggctgc aggagttcca cgtcgacggg ctgcgcttcg
     5161 acgcggtgca tgcgatcctc gacgacagcg agcatcacgt gctggccgaa atcgccgagc
     5221 atgcgcgcgc ggcgctgccc ggacgggaag ttcatctcgt tctcgagaac gacgccaacc
     5281 aggcgcgctt cttgcggcgc gagcccgacg gacatccggc cctgtacact gcgcagtgga
     5341 atgacgacct gcaccattgc tggcacacgc tgctgaccgg cgaggacgac ggctattacg
     5401 tcgattacgc cgacgagccg gtcagacgcc tcggacgctg cctcgccgag ggcttcgcgt
     5461 atcagggaga gccgtcggcg cacagaaacg gcgaagcgcg cggcgaaccc tctgcgcacc
     5521 tgcccccggc cgccttcgtc agcttcctgc aaaaccacga ccagatcggc aaccgcgcct
     5581 tgggcgagcg catttcccac ctcgctccgc ccgagcggct ggcgctcgcc cgggccggcg
     5641 tgctgctcgc tccgcacgtg ccgatgctct acatgggcga ggaatgggac gcctcga
//
LOCUS       DATAIQ010000426         5193 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_22277, whole genome shotgun sequence.
ACCESSION   DATAIQ010000426 DATAIQ010000000
VERSION     DATAIQ010000426.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 5193)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5193)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5193
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_22277"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1302
                     /locus_tag="VHN20_07120"
     CDS             <1..1302
                     /locus_tag="VHN20_07120"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEX2725574.1"
                     /translation="RWPEHIDAKIAALLVDSRWIAFLDAQPPERVAAWQRQRLSQLLG
                     HAAAHSPWWRERVSHLEGRADAVENVPLMSREQYRDSIAAAGGPLQMPAAHGAAHKHS
                     TSGSSGVPVEFFTSALLARLLTAEWYHDDLRQGRDPNSSRAEISTRVPDHAGEHIFVR
                     GNPVFGGGDGFRRKAQRSGIAEHAHWLSRVKPAYLSIPPHMLSAMMEVYESGKLAPPA
                     VAQILTFGETVDTELRRRARAVFGASIRDRYSSEEVGAIAFQCPHSDEHYHVASSNVV
                     VEILDENGRRCAPGVVGRVFVTGLHNWASPAVRYELNDMAAWQPSCACGRHAPVLTQL
                     LGRKRFLVRLPSGDRVAPRIFARQLLPIAPVREHRLVQVSETTLHAELVLDRPITEDE
                     RHGIAAVLREIISSELSYEVRQVEKIDWGPTYKRQDVISLI"
     gene            1356..2132
                     /locus_tag="VHN20_07125"
     CDS             1356..2132
                     /locus_tag="VHN20_07125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725575.1"
                     /translation="MAGTNVLIGTPTAGGVVKVQYTHTVANTIRDLARNGIGVDYLTF
                     DGPDNAIGRDYIASHMLEKGHTHLLFVDSDMWFDGTLCRRMIGLEKPLVGCVYAKRRL
                     DFGQVERNLEMADHRIDAALALSLEYNVVLPDGPLRVENGLCRVHAFGMGAVLIQRQV
                     FEAMIEKRVSTLSRAGAALGVANPQYDFFAHIAGPDGAMLGEDYSFCQKWREGCGGDV
                     WALVDADIRHIGDMAYGVPFLKRLNAIAAAARTIGEPVRP"
     gene            2211..3656
                     /locus_tag="VHN20_07130"
     CDS             2211..3656
                     /locus_tag="VHN20_07130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725576.1"
                     /translation="MRLNDKQSGIDSMRRDRALMPDLPTSSAIPGLARPQSGADSGGV
                     RQGWPERIDAKGAALVTDSAWIGYLDGQPHERVQDWQRRRLARLVGHATQQSAWWRKR
                     LGHLGARRGFGIRDLPITSREDFRDSVTAAGGPLPMPQNHGTPDKGSTSGSSGTPVTF
                     YTSALSRRLISAEWHYDDIRQRRDPNLPGAELSGGRIPEHSGEHHLIRGSPVFGTRDW
                     MMRRLQQFPLEEHARWLSRVKPAYLSVSPNLLAGMLDVYEGGRVPAPPISQVLTYAET
                     VDRNIRERARSLLGASIRDRYSCFEIGPIAFQCPHSDDHYHLASSNVIVEILDDAGLP
                     CAPGVVGRVVVTGLHTFASPTIRYELNDLAAWHPGCACGRHAPVLVRLLGRKRFLIRL
                     PSGDRTLPRIAARHWIGIAPVREYRLVQVSEAVLHAEIVLDRPLTDDERHGFVAMLQR
                     EISHELTYEIHQVERIAWGPTYKRQDVISLI"
     gene            3653..5083
                     /locus_tag="VHN20_07135"
     CDS             3653..5083
                     /locus_tag="VHN20_07135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725577.1"
                     /translation="MSDFSISRPDAPVPAQGGNGPATMLAADMHDPRHLPHADAASHD
                     EWPERLDAGVAALLVDTRWVAHLDRRPHEAVQAWQRTRLAALLTHAVRHSPWWRQRLA
                     GLGGQITLAGLPVMSREEYRASIESVGGPLPLPPEHGSPIHEATSGSSGLPVEFYTSS
                     LAKRLLEAEWRYDSLRQGRDPAALRAELAGRVPEHSGEHSGTKFHVVLGGGETLRRRL
                     QQFTFADHARWLSRIGPAYFSTLPVALSAILDVYESGAVAPPRIAQVMTFAETVDARL
                     RQRTRSLLGAEIRDRYSCEEVGAIAFQCPHSEGHYHVASSNVVVEILDDEGRACPPDT
                     IGRVVVTGLHNHASPVVRYELNDLAAWQPRCACGRAAPVLTKLLGRKRFLVRLPSGER
                     IALRLGAKEWLDVAPVREHRLVQVSEDVLHVELVLDRPLTDMERQGIVAMLAREISPD
                     LTYDIRQVERIDWAPTYKRQDLVSLV"
BASE COUNT          845 a         1783 c         1735 g          830 t
ORIGIN      
        1 aggtggccgg agcatatcga cgccaagatc gccgcattgc tcgtggacag ccgctggatc
       61 gcctttctcg acgcgcagcc gcccgagcgc gtggcagcgt ggcagcgaca gcgcttgtcg
      121 caattgctcg gccatgccgc cgcgcattcc ccgtggtggc gcgagcgcgt gtcgcatctg
      181 gaggggcgcg cggatgcggt cgagaacgtg cccctcatga gccgcgagca gtatcgcgac
      241 tcgatcgcgg ccgcgggcgg gccactgcaa atgccggcgg cgcacggcgc tgcgcacaag
      301 cattcgacgt ccggctcgtc gggcgtgccc gtcgaattct tcacgtcggc cctgctggcg
      361 cggctgctga cagcggagtg gtaccacgac gacctgcggc aaggccgcga tccaaactcg
      421 tcgcgcgcgg aaatatcgac gcgggtaccg gatcacgccg gcgagcacat cttcgtcagg
      481 ggcaacccgg tgtttggcgg cggcgacgga ttccgtcgca aggcgcaacg ctccggcatc
      541 gccgagcacg cgcattggct cagccgcgtg aagcctgcct atctgagcat cccgccacac
      601 atgctatcag ccatgatgga ggtatatgaa agcgggaagc tcgcgccacc cgccgtcgcg
      661 cagatcctca cgttcggcga gacggtcgat acggagctgc gccggcgggc ccgcgccgtc
      721 ttcggcgcgt cgatccgcga ccgctactcg agcgaggaag tcggcgccat cgccttccag
      781 tgcccgcaca gcgacgaaca ttaccacgtg gcctcgagca acgtcgtcgt cgagatcctc
      841 gacgaaaacg gccggcgctg cgcgcccggc gtggtcggcc gcgtcttcgt caccggattg
      901 cacaattggg cgagtccggc ggtccgctac gagctcaacg acatggcggc ctggcagccg
      961 tcatgcgcct gcgggcggca cgcgcccgtg ctgacgcagt tgctcggccg caagcgcttc
     1021 ctcgtgcgcc tgccgtcggg cgaccgcgtg gcgccgcgca tttttgcgcg ccagcttctg
     1081 ccgatcgcgc ccgtgcgcga gcatcggctg gtgcaggtga gcgagacgac gctgcacgcc
     1141 gagctcgtgc tcgaccgccc catcaccgaa gacgagcggc acggcatcgc ggccgtgctg
     1201 cgcgagatca tcagttccga attgagttat gaggtccgcc aggtcgagaa gatcgactgg
     1261 gggccgactt acaagcggca ggatgtgatc agcttgatct agcagcgaga gacggcaacg
     1321 atgatggggc ggcgagcgcg cagggtggaa tggccatggc tggcacgaac gtattgatcg
     1381 gcacgccgac cgccggcggc gtcgtcaagg tgcaatacac gcacaccgtc gccaatacga
     1441 tccgcgactt ggcgcgcaac ggcatcggcg tcgactacct gacgttcgac ggccccgaca
     1501 acgccatcgg ccgcgactac atcgcctcgc acatgctgga aaagggacac actcacctgc
     1561 tcttcgtcga cagcgacatg tggttcgacg gcaccttgtg ccgccgcatg atcggactcg
     1621 aaaagccgct cgtcggctgc gtctacgcca agcggcgcct cgacttcgga caggtcgagc
     1681 gcaacctcga gatggcggac cacaggatcg acgccgcgct cgcgctgtcc ctcgaataca
     1741 acgttgtctt gcccgacggg ccgttgcgtg tggagaacgg cctctgccgc gtgcacgcct
     1801 tcggcatggg cgccgtgttg atccagcgcc aggtgttcga ggccatgatc gagaaacggg
     1861 tgagcacgct cagccgcgcc ggcgcggcgc tcggcgtcgc gaatccgcag tacgatttct
     1921 tcgcccatat tgcagggccc gacggagcga tgctgggcga ggattattcg ttttgccaga
     1981 aatggcgcga aggatgcggc ggcgacgtgt gggcgctcgt cgacgccgat atccgccaca
     2041 tcggcgacat ggcctacggc gtcccgttcc tgaaacggct caacgcgatc gcggccgcag
     2101 cgcgcacgat cggcgagccg gtccgtcctt aaggggcgct gcgtgagcga tctgcgtcac
     2161 acgcgagaga acgatccggc gaagtcagcg ccacttcgcc ggacgggatc atgcggctca
     2221 acgacaagca gagcgggatc gattcgatgc gtagggatcg cgctctgatg ccggatctcc
     2281 cgacatcttc cgccattccc ggccttgcgc gcccccaatc cggggctgac tctggcgggg
     2341 tccggcaggg ctggccggag cgtatcgacg ccaaaggcgc cgcgctcgtc accgacagcg
     2401 cgtggatcgg ttatctcgac gggcagccgc acgagcgcgt gcaggactgg caaaggcgcc
     2461 gcctggcgcg gctggtcggc cacgccaccc agcaatccgc ctggtggcgt aagcggctcg
     2521 ggcatcttgg cgccaggcgc ggcttcggca ttcgcgacct gccgatcacc agccgtgagg
     2581 acttccgcga ttcggtaacg gccgccgggg ggccgctgcc gatgccgcaa aaccatggca
     2641 cgcccgacaa gggcagcacc tccggctcga gcggaacgcc ggtgactttc tacacctcgg
     2701 cgttgtcgcg gcgattgatc agtgccgaat ggcattacga cgacatccgc cagagacgcg
     2761 accccaacct gccgggcgcg gaactgtcag gcggccggat tcctgaacac agcggcgagc
     2821 accacttgat cagggggagc cccgttttcg gcacgcgcga ctggatgatg cgccggctgc
     2881 agcaattccc cctggaggag cacgcgcgct ggctctcgcg tgtcaagccg gcttatctga
     2941 gcgtcagtcc aaacctgctc gccggcatgc tcgatgtcta cgagggcggg cgggtgccgg
     3001 ccccgccgat cagccaggtg ttgacttatg ccgagacggt ggaccggaac attcgcgagc
     3061 gtgcacgctc gcttctcgga gcgtcgatcc gtgaccgcta ttcctgcttc gagatcgggc
     3121 cgatcgcatt ccaatgtccg cacagcgacg accattatca tctcgcatcc agcaacgtga
     3181 ttgtcgaaat tctcgacgat gcgggactgc cttgcgcgcc cggcgtcgtt ggtcgtgtcg
     3241 tcgtgaccgg attgcacacc ttcgcgagcc ccaccatccg ctacgagctc aacgatctcg
     3301 cggcttggca tcccggctgt gcctgcggcc ggcacgcgcc tgtgctcgtc cggctgctcg
     3361 ggcgaaagcg cttcctgatc cgtctgccgt cgggcgaccg cacgctgccg cggatcgccg
     3421 cgcggcactg gatcggcatc gcgcccgtcc gcgaataccg ccttgtccag gtcagcgagg
     3481 ccgtgctgca tgccgagatc gtgctcgacc ggcccctcac cgacgatgag cggcacggct
     3541 tcgtcgccat gctgcagcgg gagatcagcc acgagctcac ttacgagatc caccaggtcg
     3601 agcgcatcgc ctggggcccc acatacaaac gacaggacgt gatcagcctc atatgagcga
     3661 cttttcgatt tcgcgcccgg acgccccggt gccggcgcaa ggcggcaacg gccctgccac
     3721 gatgctcgcg gcggacatgc acgacccgcg gcatctgccg cacgccgacg ccgcgagcca
     3781 cgacgagtgg cctgagcgcc tcgacgcggg cgtcgcggcg ttgctcgtgg acacgcgctg
     3841 ggtggcccat ctcgaccggc ggccgcacga ggccgtccag gcgtggcaaa ggactcgcct
     3901 cgcggccctg ctgacgcatg cggtgcggca ttccccgtgg tggcggcagc gcttggcggg
     3961 gctgggaggc cagatcacgc tcgccggcct gccggtcatg agccgcgagg agtatcgcgc
     4021 gtcgatcgaa tcggtcggcg ggccgctccc gctcccgccg gagcatggat cgccgatcca
     4081 tgaggccacg tccggctcca gcgggctgcc ggtcgagttc tacacctcga gcctggcgaa
     4141 gcgcctgctc gaggccgagt ggcgttacga cagcctgcgg cagggacgcg atccggccgc
     4201 tttgcgcgcc gagcttgccg gccgcgtccc ggagcattcc ggcgagcaca gcgggaccaa
     4261 gttccatgtt gtgctcggcg gcggcgagac gttgcgaagg cggctgcagc aattcacctt
     4321 cgcggatcac gcgcgctggc tgagccgcat cggtcccgcc tatttcagca cgcttccggt
     4381 cgccctttca gccattctcg atgtttacga aagcggcgcg gtggcgccac cgcgcatcgc
     4441 gcaggtcatg accttcgccg agaccgtcga tgcccgtttg cggcaacgca cccgctcgct
     4501 cctcggcgcg gaaatccgcg accgctattc atgcgaggag gtcggcgcca tcgccttcca
     4561 atgcccgcac agcgagggcc actatcacgt cgcctcctcg aacgtcgttg tcgagatcct
     4621 cgacgacgaa ggacgcgcct gtccgcccga cacgatcggc cgcgtcgtcg tcaccggcct
     4681 gcacaatcat gccagcccgg tcgtgcgcta cgagctgaac gaccttgcgg cgtggcagcc
     4741 gcgctgcgcc tgcggccgcg cggcgccggt gctgaccaag ctgcttgggc gcaaacgttt
     4801 cctcgtccgg ctgccgtccg gcgagcgcat cgccttgcga ctcggcgcca aggaatggct
     4861 cgacgtggcg cccgtgcgcg agcaccggct cgtgcaggtg agcgaggacg tgctgcacgt
     4921 cgaactggtg ctcgaccggc cgctgaccga catggagcgg cagggcatcg tcgccatgct
     4981 ggcgcgtgag atcagccccg acctgaccta cgacatccgc caggtcgagc ggatcgactg
     5041 ggcgccgact tacaagcgcc aggatctcgt cagcctggtg tgaccgcggc gcgacttcgg
     5101 cgccggtcga agcacggccg catgtcggcg ggtcacatcc gccgattaca ggctgcgtga
     5161 ctggctgata aggtaagcct aggaagagaa gcc
//
LOCUS       DATAIQ010000427         2432 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_332967, whole genome shotgun sequence.
ACCESSION   DATAIQ010000427 DATAIQ010000000
VERSION     DATAIQ010000427.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2432)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2432)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2432
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_332967"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..906)
                     /locus_tag="VHN20_07140"
     CDS             complement(<1..906)
                     /locus_tag="VHN20_07140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007559146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar kinase"
                     /protein_id="HEX2725578.1"
                     /translation="MRAASIGECMIELSEMPDGRFSRAYGGDTLNTAIYMARLGVEVD
                     YVTALGDDQWSDEMLAGWRNEGVGTERVVRLPGRVPGLYIIQTDRSGERRFHYWRDSA
                     PARDLFNVGETPAVVEALSRYELIFFSGITLSLYGEAGRAAFFAAIERARARGASIAF
                     DTNFRPRGWPDRGIAKAAFQEALERSDIVLASTEDLTLLFGAGSDLTRMTRPATELVI
                     KQVEPACRVMAADGTDQMVAAKPVARVVDTTAAGDSFAAAYLASRFGGAGPVAAAEAG
                     HALAGVVVGYPGAIIPRSAMPAALCS"
     gene            1111..1911
                     /locus_tag="VHN20_07145"
     CDS             1111..1911
                     /locus_tag="VHN20_07145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018043371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase"
                     /protein_id="HEX2725579.1"
                     /translation="MTKGVQFKKALVAAAAALVAMAGEASAAQCGGGAGGFEGWKRQF
                     AGEARGRGVSAEAISALMGTHYNTATIAADRGQRSFRLSLEQFLAKRGGPVIVSRGRA
                     LKQSHAALFASIEQRYGVPPGPLLAIWGMETGFGSQRGNQNVLSAVATLAYDCRRSEF
                     FTEQLYAALTLIDRGVLNASSRGSMHGEVGHTQFLPKSILNYGTGGSLDSAPNALTAT
                     ANFLKGHGWRAGGGYQPGEANFPAIQAWNAASVYQRAIALLGRQIDGR"
     gene            2009..2332
                     /locus_tag="VHN20_07150"
     CDS             2009..2332
                     /locus_tag="VHN20_07150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020819863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HEX2725580.1"
                     /translation="MNKNDLIDSLIEEHDLTRTFARDLVESVFRSISDAAQAGEEVSI
                     FGFGKFRVAERGARKGRNPQTGETIKIAASKRLKFEPARAMKTALNVKRRATKKKAPA
                     RGRGR"
BASE COUNT          414 a          829 c          829 g          360 t
ORIGIN      
        1 tgagcagaga gcggccggca tggcggagcg cggaataatc gcgcctggat agcccaccac
       61 gacgccggca agcgcgtggc cggcctctgc cgccgcgacc gggcccgcgc cgccgaaacg
      121 tgaggcgaga tacgccgcgg cgaaactgtc gccggcggcc gtcgtgtcga cgacacgtgc
      181 gaccggcttc gcggcgacca tttgatcggt gccgtccgcc gccataaccc ggcaagccgg
      241 ctcgacctgc ttgatgacca gctcggtggc gggccgcgtc atgcgggtca agtcggagcc
      301 tgcaccgaac aggagcgtca ggtcctcggt cgaggcgagc acgatatcgc tccgttccaa
      361 ggcctcctgg aacgccgctt tggcgatgcc gcgatcgggc cagccgcgcg gccggaagtt
      421 ggtgtcgaag gcgatgctgg cgccgcgcgc gcgggcccgc tcgatcgccg cgaagaatgc
      481 ggcgcggccc gcctcgccat acagggacag cgtgatgccc gagaagaaga tcaactcgta
      541 tcgcgacagt gcctcgacga cggcgggggt ctcgccgacg ttgaagagat cgcgcgcggg
      601 cgcgctgtcg cgccagtaat ggaagcgccg ctcgcccgac cggtcagtct ggatgatgta
      661 gaggcccgga acgcgcccgg gcagccgcac gacccgctcc gtgccgaccc cctcattgcg
      721 ccaccctgcc agcatctcgt cgctccactg gtcgtcgccg agggcggtga cgtagtcgac
      781 ctcgacaccg agccgggcca tgtagatggc ggtgttgagc gtgtcgccgc cataggcgcg
      841 tgaaaaacgg ccgtcgggca tttccgacag ctcgatcatg cattcgccga tgctggccgc
      901 gcgcatcatc cgctcccgac gaggtcccgg accgtatcgc gagcgccgtt gcgggaccag
      961 agcgctgcga gcattcgttt ccggcctgcg gcacttggcc cggcggaggt cgtcctaacc
     1021 ctcgccggcg attgcccggc cgggctcggc aagaacttcg cgacgccgga tttcgctgat
     1081 agtctcgacc gcatgaccga ggagttctca atgaccaaag gcgttcaatt caagaaagcg
     1141 ctcgtcgcgg ccgcggcggc tctcgtcgca atggccggag aggccagcgc cgcccagtgc
     1201 ggcgggggtg ccggcggctt cgagggatgg aagaggcagt tcgccggcga agcgcgaggc
     1261 cgcggcgtca gcgcggaggc gatctcggcc ctcatgggca cgcactacaa caccgccacc
     1321 atcgcggccg accgcgggca gaggagcttt cgcctgtcgc tcgagcagtt cctggccaag
     1381 cgcggcggtc cggtgatcgt gtcgcgcggg cgcgcgctca agcagtcgca tgccgccctg
     1441 ttcgcgtcga tcgagcagcg ttacggcgtt ccgcccgggc cgcttctcgc catctggggc
     1501 atggagaccg ggttcggcag ccagcgcggc aaccagaacg tcctctccgc ggtggcgacc
     1561 ctggcctatg actgccgccg ctcggagttc ttcaccgagc agctttacgc ggcgctgacg
     1621 ctgatcgacc gcggcgtgct caacgcaagc tcgcggggct cgatgcacgg cgaggtcggc
     1681 cacacgcaat tcctgccgaa aagcatcctc aattacggca ccggcggaag cctcgacagc
     1741 gcgccgaacg cgctcaccgc gacggcaaat tttctcaagg gtcacggctg gcgcgcgggc
     1801 ggcggctacc agcccggaga ggccaatttt cccgccatcc aggcgtggaa cgcggcttcg
     1861 gtctatcagc gcgcgatcgc gcttctcgga cggcaaattg acggtaggta agcgtgtccc
     1921 gcaggcacca agggggccaa ttacgccccg ccccccttga cgccgtccca gattcgttca
     1981 tggggaatgt cccacctgcg aggacaacat gaacaagaac gacctgatcg actccctgat
     2041 cgaagagcat gacctgacga ggaccttcgc gagagacctc gtcgagagcg tgttccgctc
     2101 aatctccgat gccgcgcagg ccggcgagga agtctcgatc ttcggcttcg gcaagttccg
     2161 cgttgccgag cggggcgctc gcaagggccg caatccgcag acgggcgaaa cgatcaagat
     2221 cgccgcgtcc aagcgcctga agttcgagcc ggcccgggcg atgaagacgg ccttgaacgt
     2281 caagcgccgc gcgacgaaga aaaaggcgcc ggcccgcggc cgcggccgct gacggctccg
     2341 ggcaggcgcg gcctgcccgt cctgcgaaac atgcctgaat gaagggcgtc cgcttcgaaa
     2401 cggaggcgga cgcgctgctt tttttagcgg cc
//
LOCUS       DATAIQ010000428         1505 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_391438, whole genome shotgun sequence.
ACCESSION   DATAIQ010000428 DATAIQ010000000
VERSION     DATAIQ010000428.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1505)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1505)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1505
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_391438"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..679
                     /locus_tag="VHN20_07155"
     CDS             <1..679
                     /locus_tag="VHN20_07155"
                     /EC_number="7.6.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008838279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2725581.1"
                     /translation="GPSGCGKSSLLEIIAGLSEPTEGEVLFEGKPIRGRVPEGIGVVF
                     QEDASFPWLTVADNIALGLRKLRLGSAEREERVQRALEMMGLTGFRTSYPSQLSGGMR
                     QRVCIARTMVMAPRLILLDEPFGALDQQTRLLMGEEMLKLWRRVGTTIFLITHALDEA
                     AMLADRIGVMSARPGRLLDIVETGWPADRTSEVVTRPEFGRITARLWKALREESLKAI
                     QDRPAVP"
     gene            676..1428
                     /locus_tag="VHN20_07160"
     CDS             676..1428
                     /locus_tag="VHN20_07160"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX2725582.1"
                     /translation="MTRVALLRILVLVAAILAIEWLCRIGIINRFTMQPPSEIMRDLY
                     RILVSGKFNGAIAATLLNSAMAFVMSVTVGISVAVIIHRRRLAREALDPLFATYYAIP
                     VIAFYPLLIMLLGVGDAPKIMIAFMLGVIAVIVNTLNGLDRVPPALVKTARVVQMSPS
                     ETALRVTLPYAMPYMLTGVKFAVAYSLIGIIGSEFILSSNGIGFEISFAYNNYDNSTM
                     YPLIVLVLVVSITLNMMLAWWEKILLARRGLA"
BASE COUNT          235 a          518 c          465 g          287 t
ORIGIN      
        1 cgggccgtcc ggctgcggca agtcaagcct gctcgagatc atcgccgggc tgagcgagcc
       61 caccgaaggc gaggtccttt tcgagggaaa gccgatccga ggccgcgttc ccgaaggcat
      121 aggcgtcgtc ttccaggagg acgcctcctt tccctggctg acggtcgccg acaacatcgc
      181 cctcggcctg cgcaagctgc gcctcggcag cgccgagcgc gaggagcgcg tgcagagagc
      241 gctcgagatg atgggcctca ccgggttccg gacgagctat ccgtcgcagc tgtccggcgg
      301 catgcgccag cgggtgtgca ttgcccgcac gatggtcatg gcgccgcgcc ttatcctttt
      361 ggacgagccg ttcggggcgc tcgatcagca gacccgtcta ctcatgggcg aggagatgct
      421 caagctgtgg cgccgcgtcg gcaccaccat cttcctgatc acgcatgccc tcgacgaggc
      481 ggctatgctg gccgaccgga tcggcgtgat gtccgcccgt cccggccggc tcctcgacat
      541 cgtcgagacc ggctggccgg ccgaccgcac gagcgaggtc gtgacgcgac ccgaattcgg
      601 gcggatcacc gcacgactct ggaaggcgct cagggaagaa tccctcaagg ccatccagga
      661 caggcctgcg gtgccatgac ccgggtcgcg ctgcttcgca tcctcgtgct cgtggcggca
      721 atcctcgcca tcgaatggct gtgccgcatt ggcatcatca accgcttcac catgcagccg
      781 ccgtccgaga tcatgcgcga cctctaccgc atcctggtga gcggcaagtt caacggcgcc
      841 atcgccgcga cgctgctcaa ttccgcgatg gcgttcgtca tgtcggtcac ggtcggaatc
      901 tcggtggccg tcatcatcca ccgccgcagg ctcgcccgcg aggcgctcga tccgttgttc
      961 gccacctatt acgccatccc ggtcatcgcc ttctatccgc tgctgatcat gctgctcggc
     1021 gtcggcgacg cgcccaagat catgatcgcg ttcatgctcg gcgtgatcgc cgtgatcgtc
     1081 aacacgctca acggcctcga cagggttccg ccggcgctgg tgaagacggc gcgggtggtg
     1141 cagatgtcgc cgtccgagac cgccctccgc gtcactctcc cctacgccat gccgtatatg
     1201 ctgacgggcg tgaaattcgc cgtggcctac tcgcttatcg gcatcatcgg ctcggaattc
     1261 atcctctcgt ccaacggcat cggcttcgag atctcgttcg cctacaacaa ttacgacaac
     1321 tcgacgatgt acccgctgat cgtcctggtc ctcgtcgtct cgatcacctt gaacatgatg
     1381 ctggcctggt gggagaagat cctcctggcc cggcggggcc tcgcatgatc gcgcgcggca
     1441 tgtcggtctg gctcaagtgg cgtggcgctt ttgtcctgat cacgggcctc ctgatcggct
     1501 ggcag
//
LOCUS       DATAIQ010000429         1919 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_299653, whole genome shotgun sequence.
ACCESSION   DATAIQ010000429 DATAIQ010000000
VERSION     DATAIQ010000429.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1919)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1919)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1919
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_299653"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..745
                     /locus_tag="VHN20_07165"
     CDS             <1..745
                     /locus_tag="VHN20_07165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HEX2725583.1"
                     /translation="EETVDELLAARRAVIARGDEPPDDLLTLLLEAADPETGQGLGEV
                     EVRANIATFIGAGHETTANALSWSLYLLSQAPDMRERVEREVDQVAGERPLVAEDLSR
                     LAFTRAVVDEALRLYPPAPLITRAAITDDRIGRFKIPKGSMVAIAPWVLHRHHCLWDE
                     PDAFDPDRFMPARRAAIDRFAYLPFGAGPRICIGASFALQEAVTVLAGVARAARLDLV
                     ADHVVQPVQRVTLRPQGGLPMRLSFREGR"
     gene            complement(742..1386)
                     /locus_tag="VHN20_07170"
     CDS             complement(742..1386)
                     /locus_tag="VHN20_07170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003597772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ClpXP protease specificity-enhancing factor
                     SspB"
                     /protein_id="HEX2725584.1"
                     /translation="MTKDLIRYDLLVQEALKGVVRKVLSEAAKDGLPGDHHFYVSFRT
                     DFPGAKVSARLREKYPQEMTIVLQHQFWDLIISEQQFEVGLSFSGVPEKLVVPFDAVT
                     GFFDPSVQFGLKFEAQDEAANTDAAAAEPAVLPVKGAEPLELAPKRPTLPVAAKPGAA
                     KAPSRQGKSAGDGEKPAKKDKAAKAAKPEAAKDKSGDDQAGAEVVSLDAFRKKS"
     gene            complement(1408..1764)
                     /gene="ssrA"
                     /locus_tag="VHN20_07175"
     tmRNA           complement(1408..1764)
                     /gene="ssrA"
                     /locus_tag="VHN20_07175"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01849"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="alphaproteobacterial-type; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="RFAM:RF01849"
BASE COUNT          304 a          648 c          620 g          347 t
ORIGIN      
        1 tgaggagacc gtcgacgagc tgctcgcggc gcgccgtgcc gtgatcgccc gcggcgacga
       61 gccgcccgac gatctcctga cgctgcttct ggaggcggcc gacccggaaa ccgggcaggg
      121 cctcggcgag gtcgaggtgc gcgccaatat cgcgaccttc atcggcgccg gccatgagac
      181 cacggccaac gcgctgtcgt ggtcgctcta tctgctgtcg caggcgcctg acatgcgcga
      241 gcgcgtcgaa cgggaggtgg accaggttgc gggcgagcgc cctctggtgg cggaggacct
      301 ttcgcgcctc gccttcacgc gtgccgtcgt cgacgaagcc ttgcggcttt acccgccagc
      361 gccgctcatc acccgggcgg ccatcaccga cgaccgcatc ggccggttca agattcccaa
      421 gggctcgatg gttgccatcg cgccatgggt gctgcaccgg caccactgcc tctgggacga
      481 gcccgacgcc ttcgatcccg accgcttcat gccggcgcgg cgcgcagcga tcgaccgctt
      541 tgcctacctg ccgtttgggg cggggccgcg catctgcatc ggggcgtcat tcgcgctgca
      601 ggaagcggtc accgtgctgg ccggcgtcgc gcgcgccgcg cggctcgatc tcgtcgcgga
      661 ccacgtggtg caacccgtgc agcgggtcac gttgcgcccg caaggcgggc tgccgatgcg
      721 gctcagcttc agggaggggc gctagctctt cttgcggaaa gcgtcgaggc tgacaacctc
      781 ggcgccggcc tggtcgtcgc cgctcttgtc cttggcggct tccggctttg ccgcctttgc
      841 ggccttgtcc ttcttcgccg gcttctcgcc atcgccggcg gacttgcctt gacgggacgg
      901 ggctttcgcc gcgccgggct tggccgcgac aggcagggtg gggcgcttcg gcgccagctc
      961 gagcggctct gcccctttca ccggcagcac cgccggctcg gccgcggccg catccgtgtt
     1021 cgccgcttcg tcctgggcct cgaacttgag gccgaactgg accgacggat cgaagaagcc
     1081 cgtgaccgca tcgaagggga cgaccagctt ctccggcacg cccgaaaacg acaggccgac
     1141 ctcgaactgc tgctcgctga tgatcaggtc ccagaactga tgctggagca cgatggtcat
     1201 ttcctgcggg tatttctcac gcaggcgcgc cgacaccttg gctcccggga aatcggtgcg
     1261 gaacgagacg tagaaatggt ggtcgccggg aaggccgtcc ttggccgctt cgctgaggac
     1321 cttgcgcacg acccccttga gtgcctcctg caccaggaga tcgtaacgga tcagatcctt
     1381 cgtcatgcgc cgccctgata taaagaaagt ggaggcttct gttgccaggt gcctccgaac
     1441 cccgcctaac ggctgctaga ccgccaggac tttagattgg tcttggggac cgcttacgcg
     1501 gccaccgcaa ccggagcaaa gttgtcgttg gcaactattg caaaggcccg ataacggcgg
     1561 aaccatgccg agcgaaagtc caccctttac gccctcgtcg atcctatttc gcccccgccg
     1621 aagcccagct cggcgctggg ttttggtgga ggcgccgggt accgcccccg ggtccgatgg
     1681 gtttattgcg atggtcgttt atcgccatag ccgccttgcg gcggctcccc agatataagt
     1741 gcgcatacct taaaaaggaa gaactgcgcc cctcagaaag aggaacagcg gggacaacac
     1801 tcgtcttcac caactcggag tctccgcagg acatccggca gagctatgag ctgggcgcca
     1861 atggctacat ccttaagccc ttcgggttca cgcaactagt ggagacggtg cacgttatt
//
LOCUS       DATAIQ010000430         2113 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_194823, whole genome shotgun sequence.
ACCESSION   DATAIQ010000430 DATAIQ010000000
VERSION     DATAIQ010000430.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2113)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2113)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2113
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_194823"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            327..1244
                     /locus_tag="VHN20_07180"
     CDS             327..1244
                     /locus_tag="VHN20_07180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725585.1"
                     /translation="MKARRSVGRSWQASIALVLALWAASGIVYAQALKLEPGAPAGDL
                     ARMIVAEGAPTAAKDGMRFPGWIEGFQPDKLDHARLRLSPGFCASADGRDLTAATAPL
                     VIDLDKVGALGRDAQDLHAATDYFIYILRHAETGEASAVVSGANTYGGVAVPEGYRIV
                     RKLRFGFVYDVARWGGIPDFHVAHWPSPFVSFTAFEDDPRWDALTSGDATTFTRISLA
                     GYLPDNARLARVQVVVRSSGQPGSAYVRSWGGQQSGILAGVANATGPTETIQVFDIRV
                     NSRRELEYRVTGGARLTVKVMGYSMTEPS"
BASE COUNT          351 a          690 c          713 g          359 t
ORIGIN      
        1 ggatctcatc gtaaccgtgg ggctcgggtt ccgaacgcgc gcgaaggctt ttgccactga
       61 tgccgccacg agcccgccgg cggcgaggca gaatgttcgt cggcttcgca tcccgagccc
      121 tcttatcgcc tgttatagag cggcggaaac ggcccatgct agagcggggt gcgtggggag
      181 gcccgcctcg cgcctggcgc gcttcgacct tcgtttcgct gaagcggctt gtgccgcacg
      241 tgatccggat catgcaacgc gcagccgacg gagcggcatc gacccgctct gaatccgtct
      301 tcggccgatt ctgcgggaga cctgtggtga aggcacgccg ttctgtgggc cggtcttggc
      361 aagccagcat cgctctggtg ctggcgctct gggccgcttc gggcatcgtg tacgcgcagg
      421 cgttgaagct tgagcccggc gctcctgccg gcgatctggc gcggatgatc gtcgctgagg
      481 gggcgccgac agccgcgaag gatggcatgc gcttccctgg ctggatcgag ggattccaac
      541 ccgacaagct cgatcacgcc cgcctgcgtc tcagcccggg tttctgtgcc tccgccgatg
      601 ggcgcgatct gaccgcggcc acggcgccgc tcgtgatcga tctcgacaag gtgggcgcgc
      661 ttggccgaga cgctcaagac ctgcacgcag cgacggatta tttcatctac atcctcaggc
      721 acgccgaaac cggcgaagca tcggcggtgg tgagcggcgc gaacacgtat ggcggggtgg
      781 ccgttccgga gggctacagg atcgtcagga agcttcgctt cggcttcgtc tatgatgtgg
      841 cgcgctgggg cggaatcccc gatttccatg tcgcccactg gccgagcccc ttcgtcagct
      901 tcaccgcttt tgaggatgat ccgaggtggg atgcgctcac cagcggcgac gcaacgacgt
      961 tcaccaggat cagccttgcc ggttacctgc ccgacaatgc ccggcttgcc cgcgtccagg
     1021 ttgtggtgcg ctcgtcgggg cagccgggct ccgcctatgt gcggtcgtgg ggcgggcagc
     1081 agtcgggcat cctggccggc gtcgccaacg caaccggccc gaccgaaacc atccaggtct
     1141 tcgacattcg ggtgaacagt cgcagagagc tggaataccg cgtgactggt ggcgctcgcc
     1201 tgaccgtgaa ggtcatgggc tattccatga ccgaaccgtc ctgacccctc gcccgttttc
     1261 gcgtcgcggc cgcgcgtgca aagcgcgcgt cagcacgcac ccgtgcgttc acctcggcag
     1321 ggttaacggt ggcgccgacg ccgcgcatag tagcggcggc gcgcataaag acgacgcctc
     1381 gcgacgtagc gtcggcgagc catctggcga cgacgaacga ggtaacggcg ccgggcagcg
     1441 tagtgcggcc ggccccgatg gctcgcatat tctgcgttga cgtcgctcac gtcggttgcg
     1501 ggcacctggt ccgccgggtc gagggggact gctcggccgg ttgcggaggc ctccgcaggg
     1561 gccggggcgg aacaaaggcc ggcggccgcc gccaagcccc caaacagacc gagaatgaac
     1621 acgcgacggt gcatgagagg atccttactg ccggccttgg ccagctgcgc cgggcgaaag
     1681 ccggcagggg agccgcatcc cgctttcaac cggctgaggg cgcttaatgt tccgggcctg
     1741 cgtactctgc gccgccgtcg cgcgcccact ctctgcgcgc caatgccgac gcgacggcac
     1801 gcgtcgggcg cgggtgtgca gttaacccaa atgggtaacc caaacgggta acgcaaacgt
     1861 gtaacccaaa tacgagcgag cctgcggcca attgcgaaga ttacttgcct ggctgggaca
     1921 agtcacgaca caaccaaggt gatgcggcgc ttaacaccgg gggaagctgt tccccccggg
     1981 gcagggcgcg taaatgccga ccatcagcca ggctggaacc gtcatcacgg cttcgggcgt
     2041 ctacactctt gaccgcgacc tggttttcag cgggcagacc ggtgccgcaa tcaccatcgc
     2101 agccaataac gtc
//
LOCUS       DATAIQ010000431         1846 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_149150, whole genome shotgun sequence.
ACCESSION   DATAIQ010000431 DATAIQ010000000
VERSION     DATAIQ010000431.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1846)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1846)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1846
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_149150"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1203)
                     /locus_tag="VHN20_07185"
     CDS             complement(<1..1203)
                     /locus_tag="VHN20_07185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020185471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase PhoX"
                     /protein_id="HEX2725586.1"
                     /translation="MASDYISRSRAAEEADDIGSNDSLNPTLGEVIAARFHRRDLLKG
                     ALAVTAISATVSPLALSAAAKAQAQSGTPGFTFKEVEAGIDERHHIAEGYDADILIRW
                     GDPIFADAPEFDPRAQTAEKQRRQFGYNNDFLGYFPIDGSNRGLLGVNHEYTAEELMF
                     PGLGKQDEQTAQDPNDPKKKIDVSHAKTTEDIVAIEMAGQGGSVIEIERRNGKWSVVR
                     NSKYSRRITAETEMEITGPAAGHARMKTKADPAGRKVLGMFNNCAGGVTPWGTWVTCE
                     ENINHYFWGKLDDSHPEARAFKRYGVPNNRYAWGKWHDRFDIVKEPNEANRFGWVVEI
                     DPYDPNSVPKKRTALGRFKHEGAAGITNKDGRYVIYTGDDERFDYVYKFVSRGTVNPN
                     DRAANMDLL"
     gene            complement(1441..>1846)
                     /locus_tag="VHN20_07190"
     CDS             complement(1441..>1846)
                     /locus_tag="VHN20_07190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012319673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725587.1"
                     /translation="GKQLWVSAEVGGTVTVIDPATRKVVRKIEFRIPGVTFEAIQPVG
                     VRLTRDGKRAFVALGPANRVAVISTATFEIEKYLLVGQRVWQLAFTPDEKLLFTTNGS
                     SNDVSVIDVQNLRVTRSIPVGRLPWGVVVSPN"
BASE COUNT          280 a          598 c          605 g          363 t
ORIGIN      
        1 gagaaggtcc atgttggcgg cgcggtcgtt cggattgacg gtgccgcggc tgacgaactt
       61 gtagacatag tcgaaacgct catcgtcgcc cgtatagatc acgtagcggc cgtccttgtt
      121 ggtgatgccg gcggcgccct cgtgcttgaa gcgtcccagc gccgtgcgct tcttcggcac
      181 cgagttcgga tcgtacggat cgatctccac cacccagccg aagcggttcg cctcgttcgg
      241 ctccttcacg atgtcgaagc ggtcgtgcca cttgccccag gcatagcgat tgttgggtac
      301 gccgtagcgc ttgaaggcgc gcgcttccgg atggctgtcg tcgagcttgc cccagaaata
      361 gtggttgatg ttctcctcgc atgtgaccca cgtgccccac ggcgtcacgc cgccggcgca
      421 gttgttgaac atgccgagca ccttgcggcc ggccggatcg gccttggtct tcatgcgcgc
      481 atgcccggcg gcggggccgg tgatctccat ctcggtctcg gcggtgatgc ggcgcgagta
      541 tttcgagttc cgcaccaccg accacttgcc gttgcggcgc tcgatctcga tgaccgagcc
      601 gccctggccg gccatctcga tggcgacgat atcctccgtg gtcttggcgt ggctgacgtc
      661 gatcttcttc ttcggatcgt tcggatcctg ggccgtctgt tcgtcctgct tgcccaggcc
      721 ggggaacatc agctcctcgg cggtatattc gtgattgaca ccgagcaggc cgcgattcga
      781 tccatcgatc gggaagtagc cgaggaaatc gttgttgtag ccgaactgcc ggcgctgctt
      841 ctcggccgtc tgggcgcgcg gatcgaactc gggcgcgtcg gcgaagatcg ggtcgcccca
      901 gcggatcagg atgtcggcgt catagccttc ggcgatgtgg tggcgctcgt cgatgccggc
      961 ctcgacctcc ttgaacgtga agcctggcgt gccggactgc gcctgcgcct ttgccgccgc
     1021 cgacagggcg agcggcgaaa cggtggccga gatcgccgtc acggcgagcg cgcccttcaa
     1081 gaggtcgcga cggtggaagc gggccgcgat gacctctccg agggtcgggt tgaggctatc
     1141 gttgctgccg atatcgtcag cctcttccgc ggcgcgcgag cgactgatgt agtccgatgc
     1201 cataagggtc ctccctggtc ccgcgccgtg acgcccgcgc gtgacgcacc atgacaccct
     1261 gaatccgcag tggccgcaac cgcttccacg gtgctgcgaa ggcgtgccac gtcgcggagg
     1321 gctattcaga agcttcagag ctccccgtgt cctcgctgtg tctttcgcgt cggcgtgcgc
     1381 aaatcttgcg gcttgccccg agcgggacgg gcctgacgaa gcgcaacgcg agtgccgccc
     1441 tcaattgggc gacacgacga ctccccaggg cagccggccg accggaatgc tcctggtgac
     1501 gcgcaggttc tgcacgtcga tcaccgaaac gtcattggac gagccgttgg tcgtgaacag
     1561 gagcttctcg tccggcgtga aggcgagctg ccagacccgc tggccgacga gaaggtattt
     1621 ctcgatctcg aaggtcgcgg tgctgatgac ggcgacgcga ttggccggac ccagcgccac
     1681 gaaggcgcgc ttgccgtcac gcgtcagccg cacgccgacc ggctggatgg cttcgaacgt
     1741 cacacccgga atcctgaact cgatcttgcg caccaccttg cgcgtcgccg gatcgatgac
     1801 cgtgacggtg ccaccgactt cggcggatac ccatagttgt ttgccg
//
LOCUS       DATAIQ010000432         2237 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_391725, whole genome shotgun sequence.
ACCESSION   DATAIQ010000432 DATAIQ010000000
VERSION     DATAIQ010000432.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2237)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2237)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2237
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_391725"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(239..1429)
                     /locus_tag="VHN20_07195"
     CDS             complement(239..1429)
                     /locus_tag="VHN20_07195"
                     /inference="COORDINATES: protein motif:HMM:NF012573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005509 - calcium ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HEX2725588.1"
                     /translation="MPTLTTNSSAPINFAGTIWVVAPGAIAFDAGAFTSGSLSCLVNY
                     GSIITQGAPGSVVFSIGGSGTLYNEPDGLINGPTAVAVTGGDGVTIRNRGDIFGVTEH
                     GVHVAGSGNHATIVNGGEIFGHLGGVTVSAGTATDVVLRNSGEISSDQHGVWLLNAPG
                     AAPVIINSGIIKGTVNAVLAEVGDRLDLTNTGQLIGDVRATSLNQADIVRNNGTIIGE
                     VRLGSGNDTYIGAGSVSRFVFGDDGADVLTGGGAVDTFGGGAGNDTLSGNGGDDILDG
                     ITGNDMLLGGAGHDTMTGGFGNDIFRYLTKSDSGLGAAADVITDFDDFGNDVINLTAL
                     FGPTMSYRHNLAFTAAGQVRINDVAGPDVVVEVNTGGTLAADMQIVLRNTNLASMTAS
                     DFIL"
BASE COUNT          404 a          711 c          705 g          417 t
ORIGIN      
        1 gtgggttcga gcctgccttt gcactgctcg tccagttccg gccctaccgc cggctagcgc
       61 aaactgcgcg cgcgtaagtc ctgtcgtgcc aagagtgccg cctgcgtccc atggcgctga
      121 cgaggacccg ttcgtcgaca acgaatacga cgctagggtc gacgcctatt acaaggttgc
      181 gccgaccgcg tgatgccgac acgcaccgag atccatctcg gtctcggcga gccctgctct
      241 acagaatgaa gtcgctcgcg gtcatgctcg ccaggttcgt gttgcgcagc acaatttgca
      301 tatcggcagc gagcgtgccg ccggtgttca cctcgacgac cacgtcaggg ccggcgacgt
      361 cgttaatgcg cacctggccg gccgccgtga aagcgaggtt gtgacggtag ctcatcgtcg
      421 gcccgaacag cgccgtcagg ttgatcacgt cgtttccgaa atcgtcgaaa tccgtgatta
      481 cgtcagcggc ggcgccaaga cctgaatccg acttcgtcag gtagcggaag atatcgttgc
      541 cgaagccgcc ggtcatggtg tcgtgtccgg cgccgccgag cagcatgtcg ttgccggtga
      601 tgccgtcgag gatgtcgtcg ccgccgttgc cgctcagcgt gtcgttgcca gccccgccgc
      661 cgaatgtgtc gacggcgccg ccgccggtca gcacgtcggc gccgtcgtct ccaaacacga
      721 aacgcgacac actgccggcg ccaatatagg tatcgttgcc cgagcccagc cggacctcac
      781 cgataatggt cccgttgttg cgaacgatat cggcctggtt gagggaggtc gcacgcacat
      841 cgccgatcag ctgaccggta tttgtgaggt cgaggcgatc gccgacctct gcgaggacag
      901 cgttgaccgt ccctttgatg atgccggaat tgatgatgac cggcgcggcg ccaggggcgt
      961 tgagcagcca gacgccatgc tggtccgaac tgatctcgcc ggaatttcgc aggacgacgt
     1021 ccgtcgccgt gcccgcgctc acggtgaccc cgccgagatg tccgaaaatc tcgccgccgt
     1081 tcacgatcgt tgcgtggttg ccactgccgg cgacatgcac cccgtgctcg gtgacgccga
     1141 agatgtcccc gcggttcctg attgtgacac cgtcgccgcc cgtcacggcg acggcggtcg
     1201 ggccgtttat gagaccatca ggctcgttgt acagcgtgcc ggagccgccg atggagaaga
     1261 cgacggatcc cggtgcgcct tgcgtaatga tgctgccgta gttcacgagg cacgaaagcg
     1321 agccggacgt gaacgcacca gcgtcgaaag caatggcgcc cggtgcgacg acccagattg
     1381 tccctgcgaa attgatcggc gcagacgaat tcgttgtgag cgtgggcatg atgtctcctg
     1441 tcgatcggat acgcgaggtt catggagttc aagcggcgct tgcatcgccg ttgcgctgca
     1501 tcggccgctg cgccgggacg ggatcaccgc gcgtgcgcgg cggcatgcga tccgatgcga
     1561 atatcctttc gttgcctttc ctcattcgtg ctccctcgct gcgccggcgg cgcgatcaaa
     1621 gacgtgcgcc cacacccagg ccagatgcct cccgagcgcg cacggggccg ccgccatcca
     1681 atcgcgacga ttggctgcgt ccgcgcacaa ctggggttca tcccggggaa atggccctca
     1741 cgggctcttg gcggggtcac aaccttagca cgagatccgg ccgcggcaat cgcaagaatc
     1801 tggatgcggc ctatgcagca cgtgagtgcg gcaccggcag catcttgcgc atttccgtag
     1861 ataattccgc caccgataaa gaggcggaac atcgcgatga cgggaacggc gatgttgatg
     1921 tttggccagt ggtgttgtcc gaaagcaggc cgatcaccag cccgatggcg gaggcagcgt
     1981 gaggggatcg agctgtagct cgtcccagga atcaagaacc ttcggcctgt tggccatcgg
     2041 tgccgccttc gaaaaacagg tggtgggtct ggccaccgcc tcacataaag aaacgatagt
     2101 cgtagacctg gtcaaattgc gcatcacaaa cccggctccc tcgaccggcg gggaaacatc
     2161 ccagctaatt taccgtcgcg caaagtgagt tctccggcca tcatcgctgc ttcgggcggc
     2221 gcggcttccc tgagctc
//
LOCUS       DATAIQ010000433         2928 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_22936, whole genome shotgun sequence.
ACCESSION   DATAIQ010000433 DATAIQ010000000
VERSION     DATAIQ010000433.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2928)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2928)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2928
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_22936"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(96..572)
                     /locus_tag="VHN20_07200"
     CDS             complement(96..572)
                     /locus_tag="VHN20_07200"
                     /inference="COORDINATES: protein motif:HMM:NF016089.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HEX2725589.1"
                     /translation="MSDVTRYGTTSRYYIPAFGALYAALGDFAWLVLRVAVGLTLVPH
                     GMQKAFGSFNGPGLMGMAGALEKMGYPAPTLFAWLVMLTELVGGVLIAVGFLTRPAAF
                     ALLVFMATAVFQHFPRGFFWTSGGFEYPLMWAAAALFFLVRGGGPYSVDRALGKEF"
     gene            785..1882
                     /gene="dctP"
                     /locus_tag="VHN20_07205"
     CDS             785..1882
                     /gene="dctP"
                     /locus_tag="VHN20_07205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012116690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein DctP"
                     /protein_id="HEX2725590.1"
                     /translation="MTPDPKRRRFLAGAAAAGATGIAAPAVAQSMPEVRWRLTSSFPK
                     QLDTIYGTAQTFARYMAEATDNRFQVQTFAAGELIPGTQALDAVQNGSIECAHTPLYF
                     YVGKEPALAFGTGVPFGLNARQQHAWWHFSDGEAIINGVLRRFNAHALVCGQSGCQMG
                     GFFRKELRDVADLKGLKFRIGGLGGEVLARLGVVPQQIPPGDVYPALERGTIDAAEFV
                     GPYDDEKLGLHKVAKYYYAPGWWEGGAMLHLVVNRAKWDELPKHYQAIVFHACEAANN
                     WMLAKYDAVNAAALRRLIGGGAEVKHFPQSIMEASLKAAGELYAELAGKSPDFKRALD
                     SMTAFRTEQLPWWGLNELAYDAFMVRTRGRA"
     gene            1929..2555
                     /gene="maiA"
                     /locus_tag="VHN20_07210"
     CDS             1929..2555
                     /gene="maiA"
                     /locus_tag="VHN20_07210"
                     /EC_number="5.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015927892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016034 - maleylacetoacetate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006559 - L-phenylalanine catabolic process
                     [Evidence IEA];
                     GO_process: GO:0006572 - tyrosine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="maleylacetoacetate isomerase"
                     /protein_id="HEX2725591.1"
                     /translation="MKLYTFFRSSASYRVRIAMNLKGLPYESVPISLPKNEQSRPEYL
                     AINPHGRVPTLDADGTVVIQSPAILEYLEELHPQAALLPQDPVLRARIRAVCAVIGCD
                     IHPLNNSGTLAYLKDRMGQDQASTDAWYGHWVRQGFSAIEQLIGPGPFAFGAAPTLAD
                     VYLVPQVFNARRFNVPLDAFPRIVAADAACAGIEAFQAAAPERQPDAA"
     gene            2617..>2928
                     /locus_tag="VHN20_07215"
     CDS             2617..>2928
                     /locus_tag="VHN20_07215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725592.1"
                     /translation="MRARKALWWGLSLVALLGLATWAGFAHLQNGGTGSWRAVLDALR
                     RPVEEVWRGRPQDRGEDMRREAALPVEQAFSLTAVREGERVTLSGSVPDEIRAAVVEL
                     TK"
BASE COUNT          492 a         1002 c          982 g          452 t
ORIGIN      
        1 ttttcgtgac gcatcattcc cctgtttccc ggctgggagc aaggaggcaa gggcaggggc
       61 tccggggccg gttcgcgcgc cggctcgcac cagcctcaga actccttgcc cagcgcccgg
      121 tccaccgaat aggggccgcc gccacggacg aggaagaaca gggcggccgc ggcccacatc
      181 agcgggtatt cgaagccgcc gctcgtccag aagaagccgc gcgggaagtg ctggaacacc
      241 gcggtcgcca tgaagacgag gagggcgaag gccgccggcc gggtcaggaa gccgacggcg
      301 atcaggacgc cgccgaccag ctcggtcagc atcacgagcc aggcgaacag cgtcggcgcc
      361 ggataaccca tcttttccag cgccccggcc atgcccatga gccccggacc attgaacgat
      421 ccgaaggctt tctgcatccc atgcggcacg agggtcaggc cgacggcgac gcgcaggacc
      481 agccacgcga agtcgccaag cgctgcgtaa agggcgccga aagcgggaat gtaatagcgc
      541 gaggtcgtgc cgtagcgggt cacgtccgac atcctgatct cctgttgagg tgggcgagac
      601 gcgggcgccc gcatcagctt gcgatcgggc cgaccagtct cactgtcaca atgcgagtgc
      661 cgccgagatt cgcagcggcg cgggcggtac atgcaggatt gccctccctc gggcaagttc
      721 cgctttcgcc gggcacggcc gttgtgcttc actctcgcgc cgctcattgc aaggacgccc
      781 cgtcatgact cccgacccca agcgcagacg cttcctcgcc ggcgccgccg cagccggcgc
      841 gaccggcatc gccgcgcctg ccgtcgcgca atcgatgccg gaggtgcgct ggcgcctcac
      901 ctcgagcttc ccgaaacagc tcgacacgat ctacggcacg gcgcagacct tcgcgcgcta
      961 catggccgag gcgaccgaca accgcttcca ggtgcagacc ttcgcggcgg gcgagctgat
     1021 cccgggaacg caggcgctcg acgccgtgca gaacggcagc atcgaatgcg cgcacacgcc
     1081 gctctacttc tatgtcggca aggagccggc gctggccttc ggcaccggcg tcccgttcgg
     1141 cctcaatgcc cgccagcagc atgcgtggtg gcatttctcc gacggcgagg cgatcatcaa
     1201 cggcgtcctg cgccgcttca acgcgcacgc cctggtatgc ggccagtccg gctgccagat
     1261 gggcggcttc ttccgcaagg agctgcgcga cgtcgccgac ctcaagggtc tcaagttccg
     1321 catcggcggc ctcggcggcg aggtgctcgc ccggctcggc gtcgtcccgc aacagatccc
     1381 gcccggcgac gtctatccgg cgctcgagcg cggcacgatc gacgcagccg agttcgtcgg
     1441 gccttacgac gacgagaagc tcgggctgca caaggtcgcg aaatactact acgcgcccgg
     1501 ctggtgggag ggcggcgcca tgctccacct cgtcgtcaac cgcgccaagt gggacgagct
     1561 gccgaagcac taccaggcca tcgtgttcca tgcctgcgag gcggcgaaca actggatgct
     1621 ggccaaatac gatgcggtca acgccgcggc gctgcggcgc ctgatcggcg gaggcgccga
     1681 ggtcaagcat ttcccgcagt ccatcatgga ggcctcgctg aaggccgccg gcgagcttta
     1741 tgccgagctc gccggcaaga gcccggattt caagcgcgcg ctcgactcaa tgaccgcctt
     1801 ccgcaccgag cagctgccct ggtgggggct gaacgaactg gcctacgatg ccttcatggt
     1861 gcgcacccgt gggcgcgcct gaacggcggc ggaacgttgt tgcaagaaaa ggaaaaggag
     1921 catctggcgt gaagctttac acgttcttcc ggtcgtccgc gtcgtatcgc gtgcgcatcg
     1981 ccatgaacct caagggcctg ccctacgagt cggtccccat cagcctgccg aagaacgagc
     2041 agagccggcc ggaatatctc gcgatcaacc cgcacggccg cgtgcccacg ctcgacgccg
     2101 acggcacggt ggtgatccag tcgccggcga tcctcgaata tctcgaggag ctgcacccgc
     2161 aggcggcgct gcttccgcag gacccggtgc tgcgggcgag gatcagggcg gtgtgcgcgg
     2221 tcatcggatg cgacatccat ccgctcaaca attccggcac gctcgcctat ctcaaggacc
     2281 ggatgggcca ggaccaggct tcgaccgatg cctggtacgg ccactgggtg cggcaaggat
     2341 tttcggcgat cgagcagctg atcgggccgg gtcctttcgc tttcggggcc gcgccgacgc
     2401 tcgccgacgt ctatctcgtg ccgcaggtct tcaacgcgcg ccgcttcaac gtgccgcttg
     2461 acgccttccc aaggatcgtc gccgccgatg cggcctgcgc cgggatcgag gcgttccagg
     2521 ccgcggctcc cgagagacaa cctgacgcgg cgtgacggtc acagtccttt cacgattttg
     2581 ggggacgcga agtccttctc tcgatgaaag ccgggcatgc gcgcgcgtaa ggcactttgg
     2641 tggggacttt cgctggtcgc gctcctcggg ctcgccacct gggccggctt cgcgcacctg
     2701 cagaacggcg gcaccggctc gtggcgcgcg gtgctggatg cgctgcgccg accggtcgag
     2761 gaggtatggc gcggacggcc gcaggatcgc ggtgaggaca tgcgtcgcga ggcggcgctt
     2821 ccggtggagc aggctttttc cttaaccgcc gttcgcgaag gcgagcgcgt cacgctgagc
     2881 ggctcggtcc cggacgaaat ccgcgcggcg gtggtcgagc tgacgaaa
//
LOCUS       DATAIQ010000434         1911 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_115624, whole genome shotgun sequence.
ACCESSION   DATAIQ010000434 DATAIQ010000000
VERSION     DATAIQ010000434.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1911)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1911)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1911
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_115624"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(172..1623)
                     /locus_tag="VHN20_07220"
     CDS             complement(172..1623)
                     /locus_tag="VHN20_07220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725593.1"
                     /translation="MGNSKKQVAAAIRDYLARERMSREQFAFKTRLGKSTVDKLLTGL
                     FSERTLAIVENHTQLSLRGLLADIQVPAAAEPRAAPATPEALQPLDRPSIAVLPFASM
                     SGDPDQDYLADGITEDIITALTRLRWLFVIARNSTFTYKGKAVDVRQVARDLGVRYVL
                     EGSVRVAGPRIRSSSQLIDAETGKHIWAEKYDRELQDLFAVQDEITEQVVGAVEPHLY
                     AEEGFRASGKQPDSIDAWGLAVRALSLINKVDRKQNEQAQELLHRAIALEPSYARAHA
                     LLSWAVWWATLCYWCPDRDEGYRQAAAHAQDALWYDASDPWARMVFGLCLSSVGQHER
                     ALGELRTALNLNPSFALGHMVLGWALLRAGSFDDGIAETGRALRMSPLDSFAGFYTAI
                     HGLALLGARRFAEALPFLRASVAAFAEYPGHYNTLISCCGHLGLAEEAQEFIAIRNRI
                     GPPLRLGVLRHNLRRFAHCEVFVEGLGKAGVPE"
BASE COUNT          307 a          660 c          637 g          307 t
ORIGIN      
        1 ggattgaatc ttgccttcgc gagcgccgcc gtcgatctcg tgacctgggc cgcatcggca
       61 acatccgcga cggaccttca gccacccgcg gcctcgaccg tgcaacccga cgcgggcaat
      121 ccacggtgaa gcacgaacgc gggtagaccg gcagcgtgaa aacgcccgcc gttactccgg
      181 cacgcctgcc ttcccgagcc cctccacgaa cacctcgcaa tgggcgaagc ggcgcaggtt
      241 gtggcgcagc acgccgagcc gcagcggcgg gccgatgcgg ttgcggatgg cgatgaattc
      301 ctgcgcttcc tcggccaggc cgagatggcc gcagcagctg ataagggtgt tgtagtgccc
      361 cggatattcg gcaaaggccg cgaccgaggc gcgcaggaac ggcaaggcct cggcgaagcg
      421 gcgcgcgcca agcagggcga gcccgtggat ggcggtgtaa aagccggcga agctgtcgag
      481 cgggctcatg cgcaatgcgc gtccggtctc ggcgatgccg tcgtcgaagg agccggcgcg
      541 cagcagtgcc caaccgagca ccatgtggcc gagcgcgaag ctcggattga ggttcagcgc
      601 cgtgcgcagc tcgccgagcg cgcgctcgtg ttgaccgacc gaactgaggc acaacccgaa
      661 caccatgcgc gcccaggggt cgctggcgtc ataccacagc gcatcctgcg cgtgcgcggc
      721 cgcttggcgg taaccctcgt cgcgatcggg acaccagtag caaagcgtcg cccaccacac
      781 cgcccagctc agcagggcgt gcgcgcgcgc gtagctcggc tcgagcgcaa tggcgcggtg
      841 caggagttct tgtgcctgct cattctgctt gcggtccacc ttgttgatca ggctgagggc
      901 gcgcactgca agcccccatg cgtcgatgct gtccggctgc ttgcccgagg cgcgaaatcc
      961 ctcctcggca tagaggtgcg gctcgaccgc ccccacgacc tgctcggtga tctcgtcctg
     1021 cactgcgaac aagtcctgca gctcgcggtc gtatttctct gcccagatat gcttgccggt
     1081 ttcggcgtcg atcagctggc tgctgctgcg gatgcgcggc ccggcgacgc gcacgctgcc
     1141 ctcgagcacg taacgcacgc cgaggtcgcg cgcgacctga cgcacgtcga ccgccttgcc
     1201 cttgtaggtg aaggtcgagt tgcgggcgat cacgaacagc cagcgcagac gcgtcagcgc
     1261 cgtgatgatg tcctcggtga tgccgtcggc gagatagtcc tggtccggat cgccgctcat
     1321 gctcgcgaac ggcaggaccg cgatcgacgg ccggtcgagg ggctgcaagg cctccggcgt
     1381 cgcgggtgcc gcgcgcggct cggcggccgc cggcacctgg atgtcggcga gcagcccgcg
     1441 cagggacagc tgcgtgtggt tctcgacgat tgccagcgtt cgctccgaga acagcccggt
     1501 cagcagcttg tcgaccgtgg acttgccgag cctggtcttg aaggcgaact gctcgcgcga
     1561 catgcgctcg cgggcgagat agtccctgat cgcggccgca acctgcttct tgctgttgcc
     1621 cattcctgtc cgctctgcgc cgcctgaacg ctcgcgcctt cccccgatgg tttccggaaa
     1681 ataccggcaa tatgcggaaa gagtcgcgga aaaaatccta gggtaaagac cgtgacgtcc
     1741 tcgatgcgca ctgcccgcgg gcttgcggat cgcggcgtcc aggctgtcgc tccggcagcc
     1801 ggcctccgcg acccgaaagg gacgatctga tgaagcggca tcattcccat acccatgccg
     1861 gcctcgcgcg ctggctgctc tggccacgac cctcgccccg cccgctgccg t
//
LOCUS       DATAIQ010000435         3828 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_438228, whole genome shotgun sequence.
ACCESSION   DATAIQ010000435 DATAIQ010000000
VERSION     DATAIQ010000435.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3828)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3828)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3828
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_438228"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(204..1400)
                     /locus_tag="VHN20_07225"
     CDS             complement(204..1400)
                     /locus_tag="VHN20_07225"
                     /inference="COORDINATES: protein motif:HMM:NF019640.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX2725594.1"
                     /translation="MLLTKAGNAEARGVARRDELLRRAAALVPVLQERAPLAERQRRC
                     PDETVADFVANDLLRICQPARYGGFDLGYDVLCEVSQTLAQGCGSQAWVHMVLADNPL
                     KLSAFTLEAQDDVWGQDPSAKIAVAVAQVGKARHVPGGVVWSGRHGFSSGIDHADWVI
                     CGGHMVDEDKPRACFALIPTGEITIVDDWHAMGLAGSGSKSFEVKEVFVPEHRVLDKK
                     AADTGRAPGTLFYTAPVTKLPRGGVSAVSFAAVVVGIAEGFLREYVTFTAPRKSRGAP
                     VATQPGVQLSLGVAAAEIEAASRMYIGAIREVMQTLERGEPVSKTQQLQGKRNAAYAC
                     QLAIRAVQQLFNNAGGRALYLDSELQRKFRDVHAAAAHHSVVWESAAAAYGAHALGLG
                     GDVGSE"
     gene            complement(1415..2419)
                     /locus_tag="VHN20_07230"
     CDS             complement(1415..2419)
                     /locus_tag="VHN20_07230"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX2725595.1"
                     /translation="MRSIKLASIAIVMGFAAAHCALAQNKDPIRVIDFPSATSLPLYV
                     AIDQGFFKQQGITVSLVHTGDSEEQMGHLIEGKYDIAATALDNVIAYQLGQSGEKAPA
                     RAPDLVVFMGSVTVDLPLVVGREVKSYDDLRGKKLAVDSPHNGYALLMRGLLEKNGVK
                     DGEYSFLQVGGSSRRWDAIRKGDAAGGLLNATTEARARAEGFPVLARTADLLADYPGS
                     AYTTTRTWAKAHEDELVKFIRAYRQALDWVFEPANRDKATEILARTVGNLTPKQAAEA
                     LNDMLTPPGTYIRDAGLSPQAVDIALNLRAKYGVPKKEVGKAADYVDMSYHQRAASAR
                     "
     gene            2678..>3828
                     /locus_tag="VHN20_07235"
     CDS             2678..>3828
                     /locus_tag="VHN20_07235"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEX2725596.1"
                     /translation="MFKVRRSLSLVAAGTALAAFPALAQDGVDFYKGKTVTYIVATAP
                     GGGYDTYGRLVSEYMQKYLPGSTFVVRNMPGAGHLIGANAIYASRPDGLTIGTFNTGL
                     IYNQLIGLEGVKFDLTKMSWVGKAGSEPRVIVCSKDAPIKTFEDLRAQKEPVKFAVSG
                     VGSANYVETTVFINAFKLPIRMLTGYNGNEDQLAMRRGEITCGLGSRSTFDAFVKNSY
                     GHYITQFGGTDKDVRQLRDLVTDPSAKDLVALMQSQGDIARLTAGPPGIPKDRLDALR
                     AAYRKALEDPELQAKAAKLDRPVDPGYGDDVLSAVKEALTQKPETIALLKRAMEKEAA
                     PASAAAASGMKGTIAELKNDARQVVFKTADGKTVEAAISGSRTEITVAG"
BASE COUNT          613 a         1279 c         1302 g          634 t
ORIGIN      
        1 ccgaggatgg gatatgtcgg cacactggcg ctttgcgccg cggccggact tgtggccagc
       61 agcgccgcgc cgagcgccgt cgccgccagc agcggccagt gtctgggcaa atgcttcatg
      121 tgcttcctcc ctggtcggat cacgaggatc cttattgctt ggccgtgctt atgcattgct
      181 gcgcacgttg cgcaaggccg cttctactcg ctccccacat cgcccccgag ccccaaggca
      241 tgcgcgccat aggcggctgc cgcgctctcc cacaccacgg agtgatgcgc ggctgccgcg
      301 tgcacgtcgc ggaacttgcg ctgcagctcg ctgtcgaggt agagcgcgcg cccgccggca
      361 ttgttgaaca gctgctgcac ggccctgatc gccagctggc aggcataggc cgcattgcgc
      421 ttgccctgga gctgctgcgt cttgctcacg ggctcgccgc gctcgagggt ctgcatcacc
      481 tcgcggatcg cgccgatata catgcgcgag gcggcctcga tctcggccgc ggcgacgccc
      541 aggctcagct ggacgccggg ttgcgtcgcg accggtgcgc cgcgcgattt gcgcggcgcc
      601 gtgaacgtca cgtattcgcg caagaatcct tcggcgatgc cgaccacgac ggcggcgaag
      661 ctcaccgcgg agacgccgcc gcgcggcagc ttcgtgacgg gcgcggtgta gaacagcgtt
      721 cccggagcgc ggccggtgtc ggccgccttc ttgtcgagga cccggtgctc gggaacgaac
      781 acctccttga cctcgaagct cttgctgccg ctgccggcga gccccatcgc gtgccagtcg
      841 tcgacgatgg tgatctcgcc cgtggggatc agggcgaagc aggcgcgcgg cttgtcctcg
      901 tcgaccatgt ggccgccgca gatcacccag tcggcgtggt cgatgccact cgagaagccg
      961 tgccggccgg accagacgac gccgcccggc acgtggcggg ccttgccgac ctgcgccacc
     1021 gcgacggcga tctttgccga cgggtcctgg ccccacacgt cgtcctgcgc ctcgagcgtg
     1081 aaggcgctga gcttgagcgg gttgtcggcg agcaccatgt ggacccaggc ctgcgagccg
     1141 cagccctggg cgagagtctg gctcacttcg cacaagacgt cgtagccgag atcgaagccg
     1201 ccgtagcggg ccggctggca gatgcgcagg agatcgttgg ccacgaaatc ggcgaccgtc
     1261 tcgtcggggc agcggcgctg ccgctccgcc agaggcgccc gttcctgcaa cacgggaacg
     1321 agcgccgcgg cgcgcctcag caattcatcc cggcgtgcaa cgccccgggc ctcggcgttg
     1381 ccggccttgg tgagcaacat ggacgaggct tccgttaccg tgccgaggcc gcgcgttgat
     1441 ggtacgacat gtcgacgtag tcggccgcct tgccgacctc cttcttcggc acgccgtatt
     1501 tggcgcgcag gttcagcgcg atgtccaccg cctgcgggct gaggccggcg tcgcggatat
     1561 acgtgcccgg cggcgtcagc atgtcgttga gcgcctcggc ggcctgcttc ggcgtcaggt
     1621 tgccgacggt cctggcgagg atttcggtgg ccttgtcgcg gttggccggt tcgaacaccc
     1681 agtcgagggc ctgcctgtag gcgcggatga acttcaccaa ctcgtcctca tgcgccttcg
     1741 cccaggtgcg cgtggtggtg taggcggaac cgggatagtc ggccaggaga tcggccgtcc
     1801 gggcgaggac cgggaagcct tcggcccgcg cacgcgcctc cgtcgtcgca ttgaggagac
     1861 cgccggcggc gtcacccttg cggatcgcgt cccatcgccg cgagctgccg ccgacctgca
     1921 ggaacgaata ttcgccgtcc ttgacgccgt tcttctcgag caggccgcgc atcagcaggg
     1981 catagccgtt atgcggcgaa tcgaccgcca gcttcttgcc gcgcaggtcg tcataggact
     2041 tgacctctcg accgacgacc agcggcagat cgacggtgac gctgcccatg aagaccacga
     2101 ggtcgggagc gcgcgccggc gctttctcgc cggactggcc gagctggtag gcgatgacgt
     2161 tgtcgagcgc ggtcgcggcg atgtcgtatt tgccttcgat caggtgaccc atctgctctt
     2221 ccgaatcacc cgtatgcacg aggctgacgg tgatgccctg ctgcttgaag aagccttgat
     2281 cgatggcgac gtagagtgga agcgacgtgg cgctcgggaa atcgatgacc cggatcgggt
     2341 ccttgttctg cgcgagcgcg cagtgtgccg cggcaaatcc catcacgatg gcgatcgacg
     2401 ccaattttat tgatctcatt gtgcgtttcc cctgcggcta gctgccggcg catagcgtat
     2461 gggcggtgcc ggcggcgcac aagggcaggg gccgcgggtc tcgcagcgtt catgggagcg
     2521 gcatccggac aggatgtcgg ggacgtggat ggcagccgcg cttgcccgcc gcgcgggccg
     2581 ccgctagctt tgcgcccgcg ggtgggtcgc acgccgaccc ccgattgcgg tcgcatggcc
     2641 caagagccgg gcaacggctt caggatggag gaatacgatg ttcaaggtga ggcggtcgct
     2701 gtccctggtt gcggccggga cggcgctggc ggcgttcccg gccctggccc aggacggcgt
     2761 cgatttctat aaaggcaaga cggtcaccta tatcgtcgcc accgccccgg gcggcggata
     2821 cgacacgtac ggacggctcg tctcagaata catgcagaaa tacctgcccg gctcgacctt
     2881 cgtcgtgcgc aacatgccgg gcgcaggaca cctgatcggc gccaacgcga tctatgcctc
     2941 gcgaccggac ggcctgacca tcggcacgtt caataccggg ctcatctaca accagctgat
     3001 cggcctcgaa ggcgtgaagt tcgatctgac gaagatgtcg tgggtcggca aggccgggtc
     3061 cgagccgcgc gtcatcgtgt gctccaagga cgcgccgatc aagaccttcg aggacctgcg
     3121 cgcgcagaag gagccggtga agttcgcggt gtcgggggtc ggcagcgcca actacgtcga
     3181 aacgacggtg ttcatcaacg cgttcaagct gccgatccgc atgctcaccg gctacaacgg
     3241 caacgaggac cagctcgcca tgcggcgtgg cgagatcacc tgcgggctcg ggtcgcgctc
     3301 caccttcgac gctttcgtca agaatagcta cggccattac atcacgcagt tcggaggcac
     3361 cgacaaggac gtgcggcagc tgcgcgatct cgtcaccgac ccttcggcga aggacctcgt
     3421 cgcgctgatg cagtcgcaag gcgacatcgc acgcctcacg gccggccccc cgggcattcc
     3481 gaaggaccgc ctcgacgcgc tgcgtgcggc ttaccgaaag gcgctggagg accccgaact
     3541 gcaggcgaag gccgccaagc tcgaccggcc ggtcgacccc ggctacggcg acgacgttct
     3601 cagcgccgtc aaggaagcgt tgacccagaa gccggagacc atcgctctcc tgaagcgcgc
     3661 gatggagaag gaagcggctc cggcatccgc ggcagccgcg tccggcatga aggggacgat
     3721 cgccgagctg aagaacgacg cccgccaggt ggttttcaag acggctgacg gaaagaccgt
     3781 cgaggcggcg atctcggggt cacgcaccga gatcacggtc gccggcca
//
LOCUS       DATAIQ010000436         1882 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_438237, whole genome shotgun sequence.
ACCESSION   DATAIQ010000436 DATAIQ010000000
VERSION     DATAIQ010000436.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1882)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1882)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1882
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_438237"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            121..1407
                     /locus_tag="VHN20_07240"
     CDS             121..1407
                     /locus_tag="VHN20_07240"
                     /EC_number="2.5.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009492695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA];
                     GO_process: GO:0019346 - transsulfuration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="O-acetylhomoserine
                     aminocarboxypropyltransferase"
                     /protein_id="HEX2725597.1"
                     /translation="MTDRLPGFHTLAIHAGAAPDAATGARATPIYQTTSFVFDDVDHA
                     ASLFGLQAFGNIYSRIGNPTCAVLEERVAALEGGTAGVAVASGHAAQVIVMHALMQPG
                     DEFVAARRLYGGSINQFTHSFKNFGWNVVWADSDDPSTFEAAITPRTKAIFVESIANP
                     GGVIVDLEAIGQIAKRHNIPFIVDNTMATPYLIRPFEYGADIIVHSATKFLGGHGNSI
                     GGVIVDGGQFNWMGDDRYPTLSKPRPEYGGMVLGETFGNFGFAIACRVLGLRDLGPAL
                     SPFNAFLILTGIETLPLRMQRHSDNALAVAEHLEGHKAVSWVSYPGLRSDRYHNLAKR
                     YCPKGAGAVFTFGLSGGYDAGVRLVSNLRLFSHLANIGDTRSLVIHPASTTHRQLTDE
                     QRARAGAGQEVVRLSIGLEDPEDLIADLDQALAAAA"
     gene            1404..1715
                     /locus_tag="VHN20_07245"
     CDS             1404..1715
                     /locus_tag="VHN20_07245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725598.1"
                     /translation="MTIRWDEQENGDWHGLSGELIVALVVPDPSGRKRWLWDVTVQRP
                     PGWRNEGHRTSPLAARRAADDYWTRWCEAAALKPDIERLVAGSEAAIPAPAARKRRAK
                     A"
BASE COUNT          283 a          678 c          612 g          309 t
ORIGIN      
        1 ctgcggccgg gaatgctgta tggctccgct taccttgacc gcctcggtct tgtccgctta
       61 aacgaacttc cgttcgatat gcagtccaga ctcggcggat ctgccgatcc aggagccttc
      121 atgaccgacc gcctgcccgg cttccatacc ctcgccattc acgcaggagc ggcgccggac
      181 gccgccaccg gcgcgcgcgc gacgccgatc taccagacca cctcgttcgt gttcgacgac
      241 gtcgaccatg ccgcctcgct gttcgggctg caggccttcg gcaacatcta ttcgcgcatc
      301 ggcaatccga cctgcgccgt gctcgaggag cgcgtcgccg cgctcgaggg cggcacggcc
      361 ggggtcgcgg tcgcctcggg ccacgccgcg caggtcatcg tcatgcacgc gctgatgcag
      421 ccgggcgacg agttcgtggc ggcgcgcagg ctgtacggcg gctcgatcaa ccagttcacg
      481 cattcgttca agaatttcgg ctggaacgtg gtgtgggcgg acagcgacga tccctcgacc
      541 ttcgaggccg cgatcacgcc gcgcaccaag gcgatcttcg tcgagtcgat cgccaatccg
      601 ggcggcgtga tcgtcgatct cgaggcgatc gggcagatcg ccaagcgcca caacatccca
      661 ttcatcgtcg acaacacgat ggcgacgccg tacctgatcc ggccgttcga atacggcgcc
      721 gacatcattg tgcactcggc gaccaagttt ctgggcggcc acggcaattc catcggcggc
      781 gtgatcgtcg acggcggcca gttcaactgg atgggcgacg accgctatcc gacgctgtcg
      841 aagccgcgcc cggaatacgg cggcatggtg ctgggcgaaa cttttggcaa tttcggcttc
      901 gcgatcgcct gccgcgtgct cgggctgcgc gatctcggcc cggcgctgtc gcccttcaac
      961 gccttcctga tcctcaccgg gatcgagacc ctgccgttgc gcatgcagcg ccattccgac
     1021 aacgcgctgg cggtggcgga gcatctcgaa ggccacaagg cggtgtcgtg ggtgagctat
     1081 ccgggcctgc gctccgaccg ctaccacaac ctcgccaagc gctattgccc caagggcgcc
     1141 ggggcggtgt tcaccttcgg cctcagtggc ggctacgacg ctggcgtgcg ccttgtctcc
     1201 aatctcaggc tgttctcgca cctcgccaat atcggcgaca cccgctcgct ggtgatccac
     1261 ccggcctcga ccacgcaccg ccagctcacc gacgagcagc gcgcccgcgc cggcgccggc
     1321 caggaggtgg tgcgcctgtc gatcggcctc gaagaccccg aggacctgat cgccgatctc
     1381 gaccaggccc tcgctgccgc ggcatgacga tccgctggga cgagcaggag aacggcgact
     1441 ggcacggcct gtcgggtgaa ctgatcgtcg cgctggtcgt gcccgatcca tcgggtcgca
     1501 agcggtggct gtgggacgtc accgtgcagc gtccgcccgg gtggcgcaac gaaggccacc
     1561 gcacgagccc cctcgccgcc cggcgcgcgg ccgacgatta ttggacgcgc tggtgcgagg
     1621 ccgccgcgct caagccggac atcgagcggc tggtcgcggg atcagaggcg gccatcccgg
     1681 ctccggcggc gcggaagcgg cgcgccaagg cctgagtccg cggtcgcagg tcggagcgcc
     1741 gcctcgatcc gcacctgcga cgcacctccg gccggacgct ccgtcccgtt gtggctgtgg
     1801 tttcccctcg cacgaagggc ccctcgtggg ccaggtcatg cgtcgcaaca gcggctgtgc
     1861 ccctcgccga ccgcctcgtc aa
//
LOCUS       DATAIQ010000437         3196 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_56658, whole genome shotgun sequence.
ACCESSION   DATAIQ010000437 DATAIQ010000000
VERSION     DATAIQ010000437.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3196)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3196)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3196
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_56658"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..714
                     /locus_tag="VHN20_07250"
     CDS             <1..714
                     /locus_tag="VHN20_07250"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEX2725599.1"
                     /translation="SRALELEPDDALGVRIDLARLDALAPDQAVSAGYVRALFDDYAG
                     SFERHLVKNLNYRGPELLHAAVCRARTAQGRKLWFARLLDLGCGTGLVAKAFDGVCAA
                     IEGVDLSPRMLARARRTRLYKRLHEADLVTFLKHEPAGSADLVIAADVFVYMAALDQV
                     FGETHRVLGRGGLFAFTVQAHDGNGVVLGKDSRYAHGESYLRAVAAEAGFATALFERV
                     STRQDRDLDVPGFLLVLER"
     gene            852..>3196
                     /locus_tag="VHN20_07255"
     CDS             852..>3196
                     /locus_tag="VHN20_07255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019902997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0016818 - hydrolase activity, acting on
                     acid anhydrides, in phosphorus-containing anhydrides
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ligase-associated DNA damage response DEXH box
                     helicase"
                     /protein_id="HEX2725600.1"
                     /translation="MQLLEKARAGRSVLLVAPTGAGKTLAGFLPTLVELADRKPILKP
                     SPLEGEGREGEAGADPDRLALAPASPPKRGESRLHTLYISPLKALAVDIARNLETPVS
                     EMGLPIRVETRTGDTPAHKRARQVERPPDILLTTPEQLALLLAHRDARALFGGLKRVI
                     LDELHSLVTSKRGDLLALGLARLYTLAPDLTAVGLSATVREPDDLRRYLVPQRDPSSR
                     DLGPARDPHRSAEGEGDVALADLVVVAGGAKPEIHMIPLAESLPLAGHTGAIVMPEIY
                     DLVRRHRTTLVFVNTRLQAEFVFQELWNLNDDGLAIALHHGSLDVAQRRRVEAAMAAG
                     KLRAVVCTSTLDLGIDWGDVDLVINHGAPKGASRIMQRIGRANHRLDEPSRAYLVPTN
                     RFEILECQAALDAVHEAAQDTPDARLGALDVLAQHVLGMACAEPFDAVSLYEEVRSTA
                     PYSWLTWEDFESVVDFVATGGYALRTYERYAKIKRGADGLWRVRDGRVAQQYRLNVGT
                     IIEATMLKVRLGRGSRNKPGTVLPRGGRVLGEIEEAFAETMTIGDTFAFAGEVLRFEG
                     IREDEVLVTRASGTDPRVPSYAGGKFPLSSFLAERVRGILADPFEWDRLPEQMTEWLL
                     QQRRRSVLPEKRQLLVETFPRHNRHYLTCFPFEGRLAHQTLGMLLTRRLERGRLKPLG
                     FVANDYGIAVWSLDDVSARVAAEPGFLDDLFAEDMLGDDLEAWLAEQPDIARRNWTVS
                     AIDGFCAALVVGPEHITTEAWLRVIFGPNLPTTSMGLAAVQA"
BASE COUNT          451 a         1171 c         1068 g          506 t
ORIGIN      
        1 tcgcgggcgc tcgagctgga gcctgacgac gcccttgggg ttcgcatcga tctggcccgc
       61 cttgatgcgc tcgcgccgga ccaggcggtc agcgccggct acgtgcgcgc gctattcgac
      121 gactacgcgg gctcgttcga gcggcacctc gtcaagaacc tcaattaccg cggccccgag
      181 ctgctgcacg cggcggtgtg ccgcgcccgc accgcgcagg gccgaaaact gtggttcgcg
      241 cgcctgctcg atctcggctg cggcaccggc cttgtggcca aggctttcga cggcgtctgc
      301 gcggccatcg aaggcgtcga cctgtcgccg cgcatgctcg cgcgcgcccg ccgcacccgt
      361 ctttacaagc gcctgcacga ggccgatctc gtcacgttcc tcaagcacga acccgccggc
      421 agcgccgatc tcgtgatcgc cgccgacgtg ttcgtctaca tggcggcgct cgaccaggtc
      481 tttggcgaga cgcatcgcgt gctcggccgt ggcggcctgt tcgccttcac cgtgcaggcc
      541 cacgacggca atggcgtcgt gctgggcaag gattcgcgct acgcgcatgg cgaaagctat
      601 ctgcgcgccg ttgccgcgga ggcgggattt gcgacggccc tgttcgagcg cgtgtcgacg
      661 cgccaggacc gcgacctcga cgttcccggc tttctgctcg tcctggagcg ctgaggtcgc
      721 agcggggtga ccgcgggcgc gccgcgcgct acctgtgtcg cgtgcgtaaa cgctcccgcg
      781 tctctcccct gcttcccgat cgcttcgccc gctggttcgc cggccggggc tgggagccac
      841 gcgcccacca aatgcagctt ctcgaaaaag cgcgggccgg gcgctccgtg ctgctggtcg
      901 cgccgaccgg cgccggcaag accttggccg gcttcctgcc cacgctggtg gagctggcgg
      961 accgcaaacc gatcctaaaa ccctcccccc ttgaggggga gggtagggag ggggaagcag
     1021 gagctgaccc ggatcggctt gcgcttgccc ccgcctctcc cccgaagcgg ggagagagcc
     1081 gtcttcatac cctctacatc tcgcccttga aggcgctggc ggtcgacatc gcccgcaacc
     1141 tcgagacgcc ggtgagcgag atgggcctgc cgatcagggt cgagacgcgc accggcgaca
     1201 cgccggcgca caagcgcgcc cgccaggtcg agcgcccgcc cgacatcctg ctgacaaccc
     1261 cggagcagct cgcgcttctt ctcgcccacc gcgatgcgcg cgcgctgttc ggcgggctga
     1321 agcgcgtgat cctcgacgag ctgcattcgc tcgtcacgtc gaagcgcggg gatctcctcg
     1381 cgctcggcct ggcgcgcctg tacacgctgg cgccggacct caccgccgtc ggcctgtcgg
     1441 cgaccgtgcg agagcccgac gatctgcgcc gctacctggt gccgcaacgc gatccgtcct
     1501 ccagggatct cgggcctgcc cgagatccgc atcgaagtgc ggagggagag ggtgacgtgg
     1561 cgctcgccga cctcgtcgtg gtcgcgggcg gggccaagcc cgagatccac atgatcccgc
     1621 tggccgagtc cctgccgctg gccggccata cgggcgcgat cgtgatgccg gagatctacg
     1681 accttgtgcg ccggcacagg acgacgctgg tcttcgtcaa cacgcgcctg caggctgagt
     1741 tcgtgttcca ggaattgtgg aacctcaacg acgacggcct cgccatcgcc ctgcatcacg
     1801 gctcgctcga cgtggcgcag cgccgccggg tcgaagcggc catggccgcc ggcaagctgc
     1861 gcgccgtcgt ctgcacctcg accctcgacc tcggcatcga ctggggcgac gtcgatctcg
     1921 tcatcaatca cggcgcgccg aaaggcgcga gccgcatcat gcagcgcatc ggccgcgcca
     1981 accaccgcct cgacgagccc tcgagggcgt atctcgtgcc gaccaaccgc ttcgagatcc
     2041 tcgaatgcca ggccgcgctc gatgccgtgc acgaggcggc gcaggacacg ccggacgcgc
     2101 gcctcggcgc cctcgacgtg ctcgcccagc acgtcctcgg catggcctgc gcggagccct
     2161 tcgacgccgt gtcgctctat gaggaggtgc gctcgacagc gccgtattcg tggctgacct
     2221 gggaggattt cgagtcggtc gtcgacttcg tcgccaccgg cggctatgcg ctgcgcacct
     2281 acgagcgtta cgccaagatc aagcgcggcg ccgacggcct atggcgcgtg cgcgacggcc
     2341 gcgtggccca gcaataccgg ctcaacgtcg gcacgatcat cgaggcgacg atgctcaagg
     2401 tgcgcctcgg ccgcggctcg cgcaacaagc ccggcacggt gctgccgcgt ggcggccgcg
     2461 tgctcggcga gatcgaggaa gcgttcgccg agaccatgac catcggcgac accttcgcct
     2521 tcgcgggcga ggtgctgcgc ttcgagggca tccgcgagga cgaggtgctg gtgacccgcg
     2581 cctccggcac cgacccgagg gtgccgtcct acgccggcgg caagtttccg ctctcgagct
     2641 ttctcgccga gcgcgtgcgc ggcatcctgg ccgacccgtt cgagtgggac cgcctgccgg
     2701 agcagatgac ggaatggctt ctgcagcagc gccgccgctc ggtgctgccg gaaaagcgcc
     2761 agcttctcgt cgagacgttt ccgcgccaca accgccacta tctcacctgc tttccgttcg
     2821 aggggcggct cgcgcaccag acgctcggga tgctgctgac gcgccggctc gaacgggggc
     2881 gcctcaagcc gctcggcttc gtcgccaatg attacggcat cgccgtatgg agcctcgacg
     2941 atgtctcggc ccgcgtcgct gccgagccgg gctttctcga cgacctgttc gccgaggaca
     3001 tgctcggcga cgacctggag gcctggctcg ccgaacagcc cgacatcgcc cggcgcaact
     3061 ggaccgtctc cgccatcgac ggcttctgcg ccgccctcgt ggtcggcccc gagcacatca
     3121 ctacagaggc ctggctgcgc gtgatcttcg ggccgaacct gccgacgacg tcgatgggcc
     3181 tcgccgccgt gcaggc
//
LOCUS       DATAIQ010000438         2040 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_392404, whole genome shotgun sequence.
ACCESSION   DATAIQ010000438 DATAIQ010000000
VERSION     DATAIQ010000438.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2040)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2040)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2040
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_392404"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            168..968
                     /locus_tag="VHN20_07260"
     CDS             168..968
                     /locus_tag="VHN20_07260"
                     /inference="COORDINATES: protein motif:HMM:NF017815.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase-like cysteine peptidase"
                     /protein_id="HEX2725601.1"
                     /translation="MGVLGKARSLAHVFAAVLGLVSARPMAGEAPAQQRIQVAAIAAP
                     SATKPSPGSSEQQPVNPAEPEILSYSIQWNAAAAAMAADRDVVARCQAAPETCPESAR
                     RFIALLHDARDKHGRARLGEVNRAVNLAIRFTSDAAQHGADLWTSPLETLAAGRGDCE
                     DYAILKIMALRELGLAAADLRLMVLRDIRLQQDHAVALARLDGRWIVLDNRRLALLEP
                     EDLPGYTAVASFETDGRPDPTLPLANAAARALRPGPSPAWPATMFNPS"
     gene            1022..1816
                     /locus_tag="VHN20_07265"
     CDS             1022..1816
                     /locus_tag="VHN20_07265"
                     /inference="COORDINATES: protein motif:HMM:NF012863.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDSL-type esterase/lipase family protein"
                     /protein_id="HEX2725602.1"
                     /translation="MSSKTMTPWMTAALSGVLLLMPASLPHSQQPANILTPVCQAPDG
                     EIASEAPLRHLPAVLQTPTRPRVLAIGSSSTAGIGATSPYNTYPAQLEAILERLLKNV
                     DLEMFNRGVSGEIATATAERLKQEVERLGPHLVLWQVGTNDALRGVPVEAIEATIRDT
                     VQWVKEHNADIVLVGLQYTPRFARDEHYTRVRNALSRVAASENVLLVRRFDAMAFIAR
                     TQANIDYLSGDQFHLNDVGYHCMAEHIAQALVTNVFLRRRDVAFGW"
BASE COUNT          331 a          750 c          644 g          315 t
ORIGIN      
        1 gcattttaag caacttcctt tgccggcgat tcactccgag tccagcaaaa ccgcgcggcc
       61 tcgccgaact taatcgccct tccatcgctg tggtgtgatc tgggcgctcc taacaaatcc
      121 ggggcgggac cagcgattgc cggccgacgc tccggaaggg gcgtgacatg ggagttttgg
      181 gcaaagcgcg cagccttgcg cacgttttcg cggccgtgct gggtctcgta tcggcgcggc
      241 ccatggccgg cgaggctccg gcccagcagc gcatccaggt cgcggcgatt gccgcgccat
      301 cggcaaccaa gccgtctccc ggatcctccg aacagcagcc cgtcaacccg gccgagcccg
      361 agatcctgtc ctattcaatc cagtggaacg ccgccgctgc cgccatggct gccgaccgcg
      421 acgtcgttgc gcgctgccag gccgcgcctg aaacctgccc cgaaagcgcg aggcgcttca
      481 tcgccctgct tcacgacgcg cgcgacaagc acgggcgcgc ccgcctcggc gaggtcaacc
      541 gggcggtcaa cctggcgatc cgcttcacga gcgatgcggc ccagcacggc gccgacctgt
      601 ggacgtcgcc gctcgagacc ctcgccgcgg ggcgcggcga ttgcgaggat tacgccatcc
      661 tgaagatcat ggccctgcgc gagctcgggc ttgcggccgc cgacctgcgc ctgatggtcc
      721 tgcgcgacat caggctgcag caggaccacg cggtcgcgct ggcccggctc gacgggcgct
      781 ggatcgtgct cgacaaccgg cggctggccc tgctcgagcc cgaggatctg cccggctata
      841 cggccgtggc cagcttcgag acggacggcc ggccagaccc cacgctgcct ctcgccaacg
      901 ccgccgccag ggctttgcgg cccggcccgt cgccggcgtg gcccgcgaca atgttcaacc
      961 cgtcgtgatc gtccccttgg acgacggcac aagaaccttt ataattgatc aagagtacgt
     1021 gatgtccagc aagaccatga ccccctggat gacggcggcc ctcagcgggg tcctcctgct
     1081 gatgcccgcg tccctgccgc attcgcagca gccggccaat atcctcacgc cggtctgcca
     1141 ggcaccggac ggcgagatcg cgtccgaggc gccgctgcgc caccttccgg cggtcctgca
     1201 gacgccaacc cggccacgcg tgctcgcgat cggatcctcg tcgaccgcgg gcatcggggc
     1261 gacgtcgcca tacaacacct atccggcgca gctcgaggcg atcctcgagc ggctcctgaa
     1321 aaacgtcgac ctggagatgt tcaaccgcgg cgtctcgggc gagatcgcca cggccaccgc
     1381 cgagcgtctc aagcaggagg tggagcgcct cggcccgcat ctcgtgctct ggcaggtcgg
     1441 caccaacgac gccttgcgcg gcgtcccggt cgaggccatc gaggcgacga tccgcgacac
     1501 cgtgcaatgg gtcaaggagc acaacgccga catcgtcctc gtcggcctcc agtacacgcc
     1561 gcgcttcgcg cgcgacgagc attacacgcg ggtgcgcaac gccctcagcc gcgtcgccgc
     1621 gagcgagaac gtgctgctcg tgcgccgctt cgacgcaatg gccttcatcg cccgcaccca
     1681 ggccaatatc gactatctgt cgggcgacca gttccacctc aacgatgtcg gctatcattg
     1741 catggccgag cacatcgccc aggcgctcgt cacgaacgtc ttcctgcgcc ggcgcgacgt
     1801 cgccttcggc tggtagacgc ttcaaactga accgatcctc gaccatgtga ggcttgggcc
     1861 gctgcacggg agcttcaggc gaagatgccc ttgtgctcgc ggcgggagcc gtcgaggata
     1921 gggcgccccc acagctccaa ggttcagcaa tcacatgacc ggcatcgcct tgatcaccgg
     1981 gtcgggccgc ggcattggcg cggcgaccgc caggctcgcc gccagacgcg gctacgccgt
//
LOCUS       DATAIQ010000439         2352 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_333406, whole genome shotgun sequence.
ACCESSION   DATAIQ010000439 DATAIQ010000000
VERSION     DATAIQ010000439.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2352)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2352)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2352
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_333406"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..134)
                     /locus_tag="VHN20_07270"
     CDS             complement(<1..134)
                     /locus_tag="VHN20_07270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012330834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn-dependent protease"
                     /protein_id="HEX2725603.1"
                     /translation="MSVGDWSACKAPSLGDLQELADEAFARLPAPFRRLCEGVVIRVD
                     "
     gene            complement(131..379)
                     /locus_tag="VHN20_07275"
     CDS             complement(131..379)
                     /locus_tag="VHN20_07275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725604.1"
                     /translation="MASDDERARESREALERAARESETIGGSALGRAGQRMSDHFAAK
                     DAGDADPIELWGRRIGRALSLIGVIGLTWWLGVQLRWW"
     gene            579..893
                     /locus_tag="VHN20_07280"
     CDS             579..893
                     /locus_tag="VHN20_07280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725605.1"
                     /translation="MFKKFTTIAIAATASLGAFAVSAESASAGFRGHGFRGGGFRHVH
                     VNRHFHINRHVHFRRHVHWRYGYRWGYRAPIYASGAYAVGYRPCVFVRRPAGVFKVCR
                     VI"
     gene            1192..1443
                     /locus_tag="VHN20_07285"
     CDS             1192..1443
                     /locus_tag="VHN20_07285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006021912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur globule protein precursor"
                     /protein_id="HEX2725606.1"
                     /translation="MLKKFATITIAAAAGLSALAMTAPSASARGISISFHGGGGWGHH
                     WGHRHWGYGSYYPVAYGAAYYPSCYFVRGRYGRLVKVCE"
     gene            1588..2094
                     /locus_tag="VHN20_07290"
     CDS             1588..2094
                     /locus_tag="VHN20_07290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013528764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber protein"
                     /protein_id="HEX2725607.1"
                     /translation="MGTPFMAEIRIFSFEFAPQGWARCDGQLLPINQNQALFALIGTM
                     YGGNGQNNFALPNLRDRVPVDDGASHDLAERGGAQSHMLTHAEMPEHIHVINATSAAA
                     STAVPGGNLLAVTAATDPLYAAPANLTALGPGSIANLGGSQPHSNQQPFLAVNFCIAL
                     QGIFPSRN"
     gene            2107..>2352
                     /locus_tag="VHN20_07295"
     CDS             2107..>2352
                     /locus_tag="VHN20_07295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016839792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber protein"
                     /protein_id="HEX2725608.1"
                     /translation="MSEPFIGEIRIFAGTFAPAGWAFCEGQHLAISENDALFQVIGTR
                     YGGDGQANFALPDLRGRLPLHQGADFTIGEQGGTEAVT"
BASE COUNT          395 a          831 c          748 g          378 t
ORIGIN      
        1 tcgtcgaccc ggatgacgac gccttcgcac aatctgcgga acggcgcggg cagacgggca
       61 aacgcctcgt ccgcaagctc ctggaggtcg ccgagcgagg gcgccttgca tgccgaccag
      121 tcgcccacgc tcaccaccag cgcagctgca cgccgagcca ccaggtgagc ccgatgacgc
      181 cgatcagcga cagggcgcgc ccgatgcgcc gcccccatag ctcgatcggg tcggcgtcgc
      241 cggcgtcctt cgccgcgaaa tggtcactca tacgctgccc ggcgcggccc agcgccgagc
      301 cgccgatcgt ctccgattcg cgcgccgcgc gctcgagggc ttcacgcgat tctctcgcgc
      361 gctcgtcgtc gctcgccatc cgattcctcg ctcccggcca ccgtagcgga accacgccgc
      421 aaggccagtg cgctgcaccg tcgcgaggcg ggcctgcagc aacgccctgc acgtgttgca
      481 gagcacgcca agaagttctc tccgatgcga cagtcattct tgagcaatgg atggaattcc
      541 agctcgtaac aaccggatag gaccagagga gagcacacat gttcaagaag ttcacaacta
      601 ttgccattgc ggccacggcc agtctcggcg ccttcgccgt gagcgccgag tccgcttcgg
      661 cgggcttccg cggccacggc ttccgcggcg gcggcttccg gcacgtccac gtcaaccgcc
      721 acttccacat caaccggcat gtgcatttcc ggcggcatgt gcactggcgc tacggctatc
      781 gctggggcta ccgggctccg atctacgcaa gcggcgccta cgcggtcggg tatcgtccct
      841 gcgtcttcgt ccgccggccc gcgggcgtgt tcaaggtgtg ccgcgtgatc tgaacatgat
      901 ccggcgaagg cggggcgaga tcgaactcat gtgaagcgat ctcgctcggc ccgagccctg
      961 aattgatggc ggcggccgcc cggcaacggg cggccgcttc ctttgtgcgc gcccgcacgc
     1021 cggcaggatc gcttgcaacc tccgccctga tcgcaaagcc ctcggcgcgc gcgaccgtca
     1081 cgtttccgga tgtgctgcgg agcacggcgg cccatgtcca ttcgcggcat aacgattctc
     1141 gagcaagggc aaccggctca accagagaga cagggatcac ggagatcagc catgttgaag
     1201 aaattcgcca cgatcacgat cgccgccgcc gccggtctta gcgcgttggc catgaccgcc
     1261 ccgtccgctt ccgccagggg catcagcatc agcttccacg gcggtggcgg ctggggccac
     1321 cactggggcc atcggcactg gggttacggg tcctactatc ccgtcgccta cggcgcggcc
     1381 tactacccga gctgctactt cgtccgcggc cgctacggca ggctcgtcaa ggtctgcgaa
     1441 taacgatcca ggccacgcaa aaaactcggc cgcccaagac gggcggccgt tttcgtttgc
     1501 agcgccggcg gcgtcaaagc ttgacgggag gcgccgccga gacgactatc acttgaagtt
     1561 gtgagccatg gtccgaaggg gggcagcatg ggcacacctt ttatggccga gatccgcatc
     1621 ttctcgttcg aatttgcgcc gcaaggctgg gctcgttgcg acggccagct tctcccgatc
     1681 aaccagaacc aggcgctctt cgccctgatc gggacgatgt atggcggcaa cggccagaac
     1741 aacttcgcat tgcccaatct gagggatcgc gtgccggtcg acgacggcgc cagccacgac
     1801 ctcgcggagc gcggcggcgc ccagagccat atgctcacgc acgccgagat gccggagcat
     1861 atccacgtca tcaacgccac gagcgcggcc gcctcgacgg cggtgccggg cggcaatctc
     1921 ctggcggtga cggcggcgac cgatcccctc tatgcggcgc ctgccaatct cacggcgctg
     1981 ggcccgggct cgatcgcgaa tctcggcggc agccagccgc actccaacca gcagccattc
     2041 ctcgccgtga acttctgcat cgccctgcag gggattttcc cgtcgcgcaa ctgagggagc
     2101 gccgccatga gcgagccttt catcggcgag atccgcatat tcgccggcac gttcgcgccg
     2161 gccggctggg cgttctgcga gggccagcac ctggcgatct ccgagaacga cgccctgttc
     2221 caggtgatcg gcacgagata cggcggcgac gggcaggcga acttcgcgtt gccggacctg
     2281 cgcggccggc ttcccctgca tcagggggcc gacttcacga ttggggagca gggcggcacg
     2341 gaggccgtca cg
//
LOCUS       DATAIQ010000440         3168 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_195169, whole genome shotgun sequence.
ACCESSION   DATAIQ010000440 DATAIQ010000000
VERSION     DATAIQ010000440.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3168)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3168)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3168
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_195169"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..696
                     /locus_tag="VHN20_07300"
     CDS             <1..696
                     /locus_tag="VHN20_07300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018648773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX2725609.1"
                     /translation="TEASADTSTNVQAVAAAAEQLASSIAEIGRQITESNGIVNETVL
                     QAERTDACVKELAEATQRIGEVINLINAIASQTNLLALNATIEAARAGEAGKGFAVVA
                     SEVKSLAGQTAKATDEIAATIGTIQSLTGDAVQTIRDIGSAITRLSEVSTVVATAIEE
                     QGVVTQEIARSAQNAAHGTMQVATNIGEVDREANETGNASGQVLSAAHTLADKGNQLR
                     AEVDRFVQRVRAA"
     gene            complement(756..2978)
                     /locus_tag="VHN20_07305"
     CDS             complement(756..2978)
                     /locus_tag="VHN20_07305"
                     /EC_number="2.3.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004474 - malate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006097 - glyoxylate cycle [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malate synthase G"
                     /protein_id="HEX2725610.1"
                     /translation="MANEQATARVEAGGLKVARVLHDFINQEAILGTGIAADAFWGGL
                     GALVRDLGPRNRDLLATRDALQKRIDEYHRTNPGHPALPAYERFLRDIGYLRPEPADF
                     TIRTAHVDDEIARIPGPQLVVPVSNARYALNAANARWGSLYDALYGTDAIPDAGDLAR
                     GPGFNKKRAARVVAQARAFLDEAAPLARGTHADATSYTVENGALAVTHKDGGRTTLAR
                     RDQFAGFHGDAASPSAVLLRHHGLHIELTIDRDNAMGREDGAGIADVVIESAVTTIMD
                     LEDSVAVVDAGDKTVVYRNWLGLMTGSLATSFEKSGHTLERRLNPDRVYRKPDGGELI
                     LHGRSLMLVRNVGHHMYTDAVLDQAGQAIPEGILDAAATALIAIHDLNRTGALRNSRT
                     GSVYIVKPKMHGPDEVAFTDALFGRVEDMLSLPRHTLKMGIMDEERRTTVNLKACIHA
                     AADRVAFINTGFLDRTGDEIHTSMEAGPMIRKNDMKNTAWIKAYEDWNVDIGLACGLP
                     GKAQIGKGMWAMPDRMADMLAQKKAHPMAGANTAWVPSPTAATLHALHYHQVDVLARQ
                     RELVGRPPAKLSDILTIPVALSNWPRDAVQQELDNNCQGILGYVVRWIDQGVGCSKVP
                     DIHDVGLMEDRATLRISSQHVANWLHHGIVSRDQVLATLRRMAEVVDRQNAGDPLYVP
                     MTGNYDGPAFQAACDLIFKGRVQANGYTEWILHERRREAKAAGAPSAPGNSGAETTRR
                     "
BASE COUNT          486 a         1045 c         1105 g          532 t
ORIGIN      
        1 acggaagcgt ccgcggacac ctcgaccaac gtgcaggccg tggccgcggc ggcggagcag
       61 cttgcctcgt cgatcgccga aatcggccgc cagatcaccg agagcaacgg catcgtcaac
      121 gagacggtgc tgcaggccga gcgcacggat gcctgcgtca aggagctggc cgaggcgacg
      181 cagcgcatcg gcgaggtgat caacctgatc aatgccatcg ccagtcagac caatctgctg
      241 gcgctcaacg ccacgatcga agcggcgcgc gccggcgagg ccggcaaggg cttcgccgtc
      301 gtcgcctcgg aggtcaagtc gctggcgggg cagacggcaa aagccaccga cgagatcgcc
      361 gcgacgatcg gcacgatcca gtcgctcacc ggcgatgcgg tgcagaccat ccgcgacatc
      421 ggcagcgcca tcacgcgcct gtcggaggtc tcgacggtcg tcgcgacggc gatcgaggag
      481 cagggtgtcg tcacgcagga gatcgcgcgc agcgctcaga acgcggcgca cggcaccatg
      541 caggtcgcga ccaatatcgg cgaggtggac cgcgaggcga acgagaccgg caacgcctcc
      601 ggccaggtcc tttcggccgc gcacaccctc gccgacaaag gcaaccagct gcgcgccgag
      661 gtcgaccgct tcgtgcagcg cgtccgggcg gcgtaacttc caccacctcc caatggatct
      721 cgggatcacc cgaggtccat ggtgagacgg gcgcgtcagc gcctggtcgt ctcggcgccg
      781 ctgttgccgg gcgcgctcgg cgcgcctgcc gccttcgcct cgcggcggcg ctcatgcagg
      841 atccattcgg tgtagccgtt cgcctgcacg cgccccttga agatgaggtc gcaggccgcc
      901 tggaaggccg ggccgtcgta attgcccgtc atcggcacgt agagcggatc gcccgcgttc
      961 tgccggtcga cgacctccgc catgcgcctg agggtcgcca ggacctggtc cctgctgacg
     1021 atgccgtgat gcagccagtt ggcgacatgc tggctcgaga tgcgcaaggt ggcgcggtcc
     1081 tccatcaggc cgacgtcatg gatgtcgggg accttggagc agccgacgcc ctggtcgatc
     1141 cagcgcacga cgtagccgag gatgccctgg caattgttgt cgagctcctg ctgcaccgca
     1201 tcgcgcggcc agttcgacag cgccaccggg atcgtcagga tgtcggagag ctttgcgggc
     1261 gggcggccca ccagctcccg ctgccgggcg agcacgtcga cctggtggta gtgcagggcg
     1321 tgcagggtcg ccgccgtcgg cgatggcacc caggcggtgt tggcgccggc catgggatgg
     1381 gccttcttct gcgccagcat gtcggccatc ctgtcgggca tcgcccacat gcccttgccg
     1441 atctgcgcct tgccgggcag cccgcaggca aggccgatgt cgacgttcca atcctcgtag
     1501 gccttgatcc acgccgtgtt cttcatgtcg ttcttgcgga tcatcggccc ggcttccatc
     1561 gacgtgtgga tctcgtcgcc ggtgcggtcg aggaacccgg tattgatgaa ggcgacgcgg
     1621 tccgcggccg cgtggatgca ggccttgaga ttgacggtcg tgcgccgctc ctcgtccatg
     1681 atccccatct tgagcgtgtg ccgcggcagg gacagcatgt cctcgacgcg gccgaagagg
     1741 gcgtcggtga aggcgacctc gtcggggccg tgcatcttgg gcttgacgat gtagacggag
     1801 ccggtgcggc tgttgcgcag cgcgcctgtc ctgttcagat cgtggatggc gatgagcgcg
     1861 gtcgcagcgg cgtcgaggat tccttcggga atcgcctgcc ctgcctggtc gagcacggcg
     1921 tccgtgtaca tgtggtggcc gacattgcgc acgagcatca ggctgcgccc gtgcaggatc
     1981 agctcgccgc cgtccggctt gcggtagacg cgatccggat tgagccggcg ctcgagcgtg
     2041 tggccgctct tctcgaagct ggtcgcaagc gagccggtca tcaggccgag ccagttgcga
     2101 tagacgacgg tcttgtcgcc ggcatcgacg accgcgacgc tgtcctcgag atccatgatc
     2161 gtcgtcacgg cggattcgat caccacgtcg gcgatgccgg cgccatcctc gcgccccatc
     2221 gcgttgtcgc ggtcgatcgt cagctcgatg tgcagaccgt gatggcgcag caggaccgca
     2281 gagggcgacg ccgcatcgcc gtggaagccc gcgaactgat cgcgccgcgc aagcgtcgtg
     2341 cgccccccgt ctttgtgcgt gaccgcgagc gccccattct cgaccgtgta ggaggttgcg
     2401 tcggcatgcg tgccccgcgc cagcggcgct gcctcgtcga gaaaggcgcg cgcctgggcg
     2461 acgacgcgcg cggcgcgttt cttgttgaag ccggggccgc gcgcaaggtc gccggcgtcc
     2521 gggatggcgt cggtcccgta gagcgcgtcg taaaggctgc cccagcgggc gttggcggca
     2581 ttgagggcat agcgtgcatt cgagaccggc accacgagct gcggtccggg gatgcgggcg
     2641 atctcgtcgt cgacatgggc cgtgcgaatg gtgaaatcgg caggttccgg cctgagatag
     2701 ccgatgtcgc gtagaaaccg ctcgtaggcc ggcagcgctg ggtgaccggg attggtgcgg
     2761 tggtattcgt cgatgcgctt ctgcagggca tcgcgcgtcg cgagcaggtc gcggttgcgc
     2821 ggccccaggt cgcgcacgag ggctccgagc ccgccccaga aggcatcggc ggcgatgccg
     2881 gttccgagga ttgcctcctg gttgatgaag tcgtggagga ccctagcgac cttgagccct
     2941 ccggcctcga cgcgcgctgt cgcctgttcg ttcgccatcc gcatcctcga aattccgcaa
     3001 cctgtccatc cacccgacgc aggttgcatg ccagcaattc gcccccctgt atgccttgag
     3061 cggtccggaa gcgagcgttg ttggtgatca aggttgccga gaataaggcc aagctttgtc
     3121 gctccacccc tggcaaacgg gcgggggcat cccaatgtcc ttagcgag
//
LOCUS       DATAIQ010000441         2221 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_23342, whole genome shotgun sequence.
ACCESSION   DATAIQ010000441 DATAIQ010000000
VERSION     DATAIQ010000441.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2221)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2221)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2221
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_23342"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            290..1312
                     /locus_tag="VHN20_07310"
     CDS             290..1312
                     /locus_tag="VHN20_07310"
                     /inference="COORDINATES: protein motif:HMM:NF013246.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005254 - chloride channel activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bestrophin family ion channel"
                     /protein_id="HEX2725611.1"
                     /translation="MHLGRQYKFTQFIGWTRWEAFCLTCWALAVTLFLQLTQWTFLTI
                     PALILTIIGSALAIILAFKNQQCYARFNDALTLSGQLSTNSLVLANKLTLALGDADAV
                     RSDPRVRRIFHRHFAWLTALRFFLRERKSWENALESGNVRFLAGLPTPESQSPLEEEL
                     KTRLPDDELQKFMTHRGDREALILRWQYAAVRNLYDDKLISELMLTVVAAALDDLARV
                     QGALKRIKSYPYARNYYSIAVMLVKIFVVILPFGFFTYAQDLGRPAGIAHWTAWLNVP
                     FSVLVGWAFVSLEKVGENSSNPFEGGANDVPISFIARRIEIEMRLMLGEATDLKPIEA
                     KDGILF"
     gene            1566..>2221
                     /locus_tag="VHN20_07315"
     CDS             1566..>2221
                     /locus_tag="VHN20_07315"
                     /inference="COORDINATES: protein motif:HMM:NF012573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005509 - calcium ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HEX2725612.1"
                     /translation="MATITGNFLPNTLVGTNADDILRGLGGSDLLVGFGGDDLLDGGT
                     GSDTMRGAFGNDTYIVDRAGDVVIDLPNGGVDRIVSSVSRTLGANIENLTLAGGASIS
                     GTGNALRNQIVGNGAANILRGLAGSDTLLGRAGNDHLFGDAGDDHLDGGLGADRMFGG
                     AGNDRYHVDTSADRVFESAGAGVDTVVSAVNFTLGSTFQNLELTGAALVGNGNGADNV
                     "
BASE COUNT          394 a          757 c          696 g          374 t
ORIGIN      
        1 cagcgcggcc agcagcgtca cgaggagtcg cgccttcacc cctgcgacgg accttcgtgt
       61 catcggggca gcgtgcatgc ggtgcctccc tcgcctgccg taaccttttc cggcagacgt
      121 cacatcgtgg tccaaaatct cgggcggaac aaaccggatt ccatggacgc gcggacggag
      181 gctccaggat ggttgcgggc cgaggcgcgg cgccagcgag cggcaacgcc agccttgtgc
      241 agccaacgaa acctgagcac tctggcgtga tgcacgcggc ggacgggtca tgcacctcgg
      301 caggcaatac aagttcacgc agttcatcgg ctggacgcga tgggaggcgt tctgcctgac
      361 ctgctgggcc ctcgccgtca ccctcttcct tcagctcacc cagtggacct ttttgacgat
      421 cccggccctg atcctgacca tcatcggctc ggcgctcgcg atcatcctcg ccttcaagaa
      481 ccagcaatgc tacgcgcgct tcaacgacgc gctgacgctg tccgggcagc tctccacgaa
      541 cagcctggtc ctggccaaca agctgaccct cgcgctgggc gacgcggacg cggtgcggtc
      601 cgacccgcgg gtcaggcgga tcttccaccg gcatttcgcc tggctgacgg cgctacgctt
      661 cttcctgcgc gagcggaaat cctgggagaa cgcgctcgaa tccgggaacg tccgcttcct
      721 cgccgggctg ccgacgccgg aaagccagtc gccgctcgag gaggaattga agacccgcct
      781 gccggatgac gaactgcaga aattcatgac gcatcgcggc gacagggagg ccctcatcct
      841 gcgctggcaa tacgcggcgg tcagaaatct ctacgacgac aagctcatca gcgaattgat
      901 gctgacggtg gtggcggcgg cgctcgacga cctcgcccgg gtgcaagggg ccttgaagcg
      961 gatcaagagc tatccgtatg cgcgcaacta ttattcgatc gccgtgatgc tggtaaaaat
     1021 cttcgtcgtg atcctgccgt tcggcttctt cacctatgcc caggatctgg gaagaccggc
     1081 cggcatcgca cattggacgg cgtggctgaa cgtcccgttc agcgtgctcg tcggctgggc
     1141 tttcgtctcg ctcgagaagg tcggcgagaa ttcgtcgaat cccttcgaag gcggcgccaa
     1201 cgacgtgccg atctcgttca tcgcccggcg catcgagatc gagatgcgcc tcatgctcgg
     1261 cgaagcgacc gacctcaagc cgatcgaggc gaaggacggg atcttgttct aaagctgtcg
     1321 gtgcggtgcg cgttgaacga cctgccgatc gagcgtaata tcccttgcac gagattttcc
     1381 ggcgtgtgag cgatgcttgc gatgccgcat ccgcgcttcg tctcgcggcc ggcagcggtg
     1441 atgatggacg cgtcgggcgg catcgcgcgt cagcttgcaa aaccatcgag ccggagcaac
     1501 ggcccaaagc tttccaggga tgacccgacg gcgacgatcg cgccggtttt ccgtcaggat
     1561 cggccatggc caccatcacg ggcaacttcc tcccgaacac gctcgtcgga acgaatgccg
     1621 atgacatcct gagaggcctc ggcggcagcg acctcctggt cgggttcggc ggtgacgacc
     1681 tgctcgacgg cggcaccggc agcgacacga tgcgcggcgc cttcggcaac gacacctaca
     1741 tcgtcgaccg cgccggcgac gtcgtcatcg acctccccaa cggcggggtc gaccgcatcg
     1801 tgagctcggt cagtcgcacg ctcggcgcca atatcgagaa cctgacgctc gccggcggcg
     1861 cctcgatcag cggaaccgga aacgccttac gcaaccagat cgtcggcaac ggcgccgcca
     1921 acatcctgcg cggcctcgcc ggctccgaca cgctccttgg acgcgccggc aacgaccacc
     1981 tgttcggcga cgccggcgac gaccacctcg acggcgggct cggcgcggac cgcatgttcg
     2041 gcggcgccgg caacgaccgc tatcacgtcg atacctccgc cgaccgggtc ttcgagagcg
     2101 ccggcgcggg cgtcgacacc gtggtcagcg ccgtcaattt cacgctcggc tccacgttcc
     2161 agaatctcga gctgaccggc gccgcgctcg tcggcaacgg caacggcgcc gacaatgtga
     2221 t
//
LOCUS       DATAIQ010000442         2087 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_195220, whole genome shotgun sequence.
ACCESSION   DATAIQ010000442 DATAIQ010000000
VERSION     DATAIQ010000442.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2087)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2087)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2087
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_195220"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1220
                     /locus_tag="VHN20_07320"
     CDS             <1..1220
                     /locus_tag="VHN20_07320"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEX2725613.1"
                     /translation="RLLDRVARELRLERDEVRRRNLVPPEQMPYATPLRTRGGMQVVL
                     DSGDYPKCQAEALARAGWAEFRARQSAARAQGRFVGIGLANYVEGTGRGPYEQVKVRI
                     EPSGRIHVYSGATAMGQSTKTMLSQIVAEQLGGDMSNVVVTAGDTAAVPLGFGGFNSR
                     QAAIAGPSAHAAALLVRNKVLAVASHMMEAGADDLEIDGREVRVKGVPDMKRSLAEVA
                     RAAAGLPGFALPGGLSPGVEATEHVVIDNMAYANGTAVAEVEVDVETGAVAVRNFVFA
                     HDCGRVIHPKIVDGQVTGGIAHGIGNALFEWMGYDGNAQPVTTTLAEYLLITSTEMPP
                     VQLLHEQSPTGLNALGVKGVGESGVLPTAAAVISAIEDALSPFDVHITRTPVSPQDIV
                     ALIDNGRPAASRG"
     gene            1238..>2087
                     /gene="pyrC"
                     /locus_tag="VHN20_07325"
     CDS             1238..>2087
                     /gene="pyrC"
                     /locus_tag="VHN20_07325"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004151 - dihydroorotase activity
                     [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HEX2725614.1"
                     /translation="MTIRKPDDWHLHVRDGAMMKAALPFTARHFGRAILMPNLIPPVL
                     TTADGIAYRERAMAALPRGSTFQPLITCYLTDNTDPDDVQRGFEEGVFTAVKLYPANA
                     TTNSAAGVTDYARIRPVLARMEKIGMRLLIHCEEVDPEVDVFDREAVYIERRLRPMTR
                     DFPGLRIVFEHLSSKIGVDYVRSAAPQLGGTITPYHLELNRTDWLGWGNRPYMYCMPV
                     IKRESDRQALRKAATSGEACFFLGTDSAPHPVSKKLAVVGAAGLFNAPVAIETYAKVF
                     EEEGALD"
BASE COUNT          343 a          684 c          736 g          324 t
ORIGIN      
        1 agcggctgct cgaccgcgtc gcgcgcgagc ttcgtctcga gcgggacgag gtgcggcggc
       61 gcaatctcgt tccgcccgag cagatgcctt atgcgacgcc gctcaggacg cgcggcggca
      121 tgcaggtggt gctcgacagc ggcgattatc ccaagtgtca ggcggaggcg ctcgcccgcg
      181 cgggatgggc ggaattccgc gcgcgccagt cggcggcgcg ggctcaaggc cgcttcgtgg
      241 gcatcggcct cgccaactat gtcgagggga cggggagggg cccttacgag caggtcaagg
      301 tgcggatcga gccgtcaggg cggatccacg tctattcggg cgcgacggcg atgggccaga
      361 gcacgaagac gatgctgtcg cagatcgtcg cggagcagct cggcggcgac atgagcaacg
      421 tcgtcgtcac ggccggggac accgcggcgg tgccgctcgg cttcggcgga ttcaacagcc
      481 ggcaggcggc gatcgccgga ccttcggcgc acgccgctgc cctcctcgtg cgcaacaagg
      541 ttctcgccgt tgccagccac atgatggaag ccggcgcgga tgacctcgag atcgacgggc
      601 gcgaggtgcg cgtcaagggc gtgcccgaca tgaagcggag cctcgccgag gtggcgcgcg
      661 ccgcggcggg cttgcccggc ttcgcccttc cgggcgggct gagcccggga gtcgaggcga
      721 ccgagcacgt cgtgatcgac aacatggcct atgccaacgg aacggccgtc gccgaggtcg
      781 aggtcgacgt cgagacgggt gcggtcgccg tgcgcaattt cgtgttcgcg catgactgcg
      841 gccgcgtcat ccatcccaag atcgtcgacg gccaggtgac cggcggcatc gcgcacggga
      901 tcggcaacgc gctgttcgaa tggatgggct acgacggcaa cgcgcagccg gtgacgacga
      961 cgcttgccga ataccttctg atcacctcga ccgagatgcc gccggttcag ctgctgcacg
     1021 agcagtcacc cacgggcttg aacgcgctcg gcgtgaaggg cgtcggcgag tccggcgtgc
     1081 tgccgaccgc cgccgccgtg atctcggcca tcgaggacgc gctgagcccg ttcgacgtgc
     1141 atatcaccag gacgccggta tcgccgcagg acatcgtcgc gctgatcgac aacggccgtc
     1201 cggcagccag caggggataa tcgggatgag cgaacgcttg accattagga aaccggacga
     1261 ctggcatctg cacgtgcgcg acggcgccat gatgaaggcc gcgctgccgt tcacggcgcg
     1321 gcatttcggc cgcgccatcc tgatgccgaa cctgatcccg ccggttctca ccacggctga
     1381 cggcatcgcc taccgcgagc gcgccatggc ggcgctgccg cggggctcga ccttccagcc
     1441 tttgatcacg tgctatctga ccgacaacac cgatcccgac gacgtccagc gcggtttcga
     1501 ggaaggcgtg ttcacggcgg tgaagctcta ccctgccaac gccaccacca attccgcggc
     1561 gggcgtcacc gactacgcca ggatcaggcc ggtcctggcg cgcatggaga agattggcat
     1621 gcggctgctg atccattgcg aagaggtgga tccggaagtc gacgtgttcg atcgcgaagc
     1681 cgtctatatc gagcgccggc tgcggccgat gacccgggat tttccggggc tgcgcatcgt
     1741 cttcgagcat ctgtcgtcga agatcggcgt cgattacgtg cgctcggcgg cgccgcagct
     1801 gggcggcacg atcacgccgt atcacctcga gctgaaccgc accgactggc tcggctgggg
     1861 caaccggccg tacatgtatt gcatgccggt gatcaagcgc gagagcgacc ggcaggcgtt
     1921 gcgcaaggcg gcgacctccg gcgaggcctg ctttttcctc ggcaccgatt cggcgccgca
     1981 tccggtatcg aagaagctgg ccgtggtcgg ggcggcgggc ctcttcaacg cgcccgtcgc
     2041 catcgagacc tatgccaagg tgttcgagga ggagggcgcc ctcgata
//
LOCUS       DATAIQ010000443         2718 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_241657, whole genome shotgun sequence.
ACCESSION   DATAIQ010000443 DATAIQ010000000
VERSION     DATAIQ010000443.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2718)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2718)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2718
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_241657"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..209)
                     /locus_tag="VHN20_07330"
     CDS             complement(<1..209)
                     /locus_tag="VHN20_07330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006470637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX2725615.1"
                     /translation="MTAPGNAPVGRKSEGDAVIVYDKVVKRFGSLTVLNGVSAMVNRG
                     EVVCLIGPSGSGKSTLLRCTNALEK"
     gene            complement(206..865)
                     /locus_tag="VHN20_07335"
     CDS             complement(206..865)
                     /locus_tag="VHN20_07335"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEX2725616.1"
                     /translation="MTLDWSIVWQYRAELAHGVLLTILLTVLTMAIAIPGGIVVMLLR
                     QSPVRPFSWLGTAYVEFFRNLPLILLVYWAFYVLPILFDIQLSPFATGLAALCLNVSA
                     YNAETFRAGVMSIRKGQREAALAIGMSQGQVMRKVVLPQALRRILPVLASTWVSLFKD
                     TSLVSVIAVGELAHTALQIRSQTFRVLEMLTAMAVLYWLLGYPQAKLVDWIYRKYGVT
                     E"
     gene            complement(862..1527)
                     /locus_tag="VHN20_07340"
     CDS             complement(862..1527)
                     /locus_tag="VHN20_07340"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEX2725617.1"
                     /translation="MEFDFSPLVDNWRFLARGLQLTLLLALATATCATILGMAVALAR
                     LYGPRWLRAAMTFYIDTMRAIPVLVVLVWTFFAFPILTGLTLPLFWAALAALTVHIAA
                     YVAEIIRAGVMSVRPGQSRAALALGMSRAQLMRKIVLPQAVIRMLPAYGSILSITIKD
                     TAIATVIAVPELMRQSETIAAQTFRPIEVYTTAMLLFFLILFPVTRGVDAVYRRVAHL
                     GRS"
     gene            complement(1586..2407)
                     /locus_tag="VHN20_07345"
     CDS             complement(1586..2407)
                     /locus_tag="VHN20_07345"
                     /inference="COORDINATES: protein motif:HMM:NF012707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HEX2725618.1"
                     /translation="MNAFRSVVITTMLLAGAAGASAQEPPAAGVSPRIDAIRKAGELR
                     VGVLANIPWLIENTSGQGEPWDGPAWVLAKEYAKLLNVKLRPVPVSHETKVPVLAANQ
                     VDLTISPLAETPERVQVVDFVIYSTTSVCMFGLASNQKFAGATRVDDLNNPDVTIAYF
                     TGGAEENWVKERFPKAKLRGVTGSGAAPVEEIMAKRADATPINRVPLVGLQKKVKGLA
                     VLPKENNCQDSTEKASPVGLALDKNQPAFLEWLRSVEKRLEPQLRADEARIINAL"
     gene            complement(2512..>2718)
                     /locus_tag="VHN20_07350"
     CDS             complement(2512..>2718)
                     /locus_tag="VHN20_07350"
                     /EC_number="4.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008972510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008927 - mannonate dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006064 - glucuronate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mannonate dehydratase"
                     /protein_id="HEX2725619.1"
                     /translation="ILLEEQKRRRDAGDPRWRIPMRPDHGHELLDDVGKPTHPGYPAI
                     GRLRGLAELRGVMAATAQLRELPL"
BASE COUNT          464 a          897 c          942 g          415 t
ORIGIN      
        1 atcttctcga gcgcattcgt gcaccgcagc agcgtcgact tgcccgagcc cgagggaccg
       61 atcaggcaga ccacctcgcc gcgattgacc atggccgaga cgccgttgag cacggtgagc
      121 gagccgaagc gcttcaccac cttgtcgtag acgatgaccg catcgccttc ggacttcctg
      181 ccgacaggag cattgcctgg cgccgtcact cggtcactcc atacttgcgg tagatccagt
      241 cgacgagctt cgcctgcgga tagccgagca gccagtagag caccgccatg gcggttagca
      301 tctcgaggac gcgaaaggtc tgcgagcgga tctgcagcgc cgtatgcgca agctcgccga
      361 cggcgatcac cgagacgagc gaggtatcct tgaacagcga cacccacgtg ctggcgagga
      421 ccggaaggat gcggcgcagc gcctgcggca gcacgacctt gcgcatcacc tggccctggc
      481 tcatgccaat ggcgagcgcc gcctcgcgct gccccttgcg gatcgacatg acgccggcgc
      541 gaaaggtctc ggcgttgtag gcggagacgt tgaggcacaa ggccgcgaga cccgtcgcga
      601 agggcgaaag ctggatgtcg aacaggatcg gcaggacgta gaacgcccag tagaccagca
      661 ggattagcgg caggttcctg aagaactcga cataggcggt gccgagccag ctgaaggggc
      721 gcaccggcga ctgccgcagc agcatcacga cgatgccgcc ggggatggcg atggccatgg
      781 tcagcacggt cagcaggatg gtgagcagca ccccgtgcgc gagctcggcc cggtattgcc
      841 agacgatgct ccagtcgaga gtcatgaccg ccccagatgc gcgacccggc gatagacggc
      901 gtcgacgcct ctcgtgaccg ggaagaggat caggaagaac agcagcatgg cggtcgtgta
      961 gacctcgatc ggccgaaacg tctgcgccgc gatcgtttcc gactggcgca taagctccgg
     1021 cacggcgatg accgtggcga tggcggtgtc cttgatggtg atcgacagga tggagccata
     1081 ggcgggcagc atgcggatga ccgcctgcgg cagcacgatc ttgcgcatca gctgcgcgcg
     1141 cgacatgccg agcgcgaggg cggcccggct ctggcccggc cgcaccgaca tgaccccggc
     1201 gcggatgatc tcggcgacat aggcggcgat gtggacggtg agcgccgcaa gcgcggccca
     1261 gaacagtgga agcgtcaggc cggtcagaat cggaaaggcg aagaacgtcc acaccagcac
     1321 gaccaggacg gggatcgccc gcatggtgtc gatgtagaac gtcatcgccg ccctcagcca
     1381 gcgcgggccg tagagccgcg ccagcgcgac cgccatgccg aggatggtcg cgcaggtggc
     1441 ggtcgcgagc gccagcagca gggtcagctg gagcccgcgc gccaggaagc gccagttatc
     1501 gacgagcggc gaaaagtcga attccatcgc ggggctccac gaggggcgcg gcgccgaacc
     1561 acgtcggcgc cggcaccggg acagctcaga gcgcgttgat gatgcgtgcc tcgtcggccc
     1621 tcagctgcgg ctccaggcgc ttctcgacgc tgcgcagcca ctcgaggaag gcaggctggt
     1681 tcttgtcgag cgcgaggccg accgggctcg ccttctcggt gctgtcctgg cagttgttct
     1741 ccttgggcag gacggccagc cccttgacct tcttctgcag gccgaccagc ggcacgcggt
     1801 tgatcggcgt cgcatccgcg cgcttggcca tgatctcctc gaccggcgcg gcgcccgagc
     1861 cggtcacgcc gcgcaacttc gccttcggga agcgctcctt gacccagttc tcctccgcgc
     1921 cgccggtgaa gtaggcgatc gtcacgtccg ggttgttgag gtcgtcgacg cgcgtggcgc
     1981 cggcgaattt ctggttcgag gcgaggccga acatgcagac gctggtggtc gagtagatca
     2041 cgaaatcgac gacctgcacc cgctccgggg tctcggcgag cggcgagatc gtcaggtcga
     2101 cctggttggc cgcgagcacc gggaccttgg tctcgtggct gaccggcacc ggccgcagct
     2161 tgacgttgag gagcttggca tattccttgg cgagcaccca ggccggcccg tcccacggtt
     2221 ctccctggcc gctcgtattc tcgatcagcc acgggatgtt ggcgagcacg ccgacgcgca
     2281 gctcacccgc cttgcggatg gcgtcgatgc gggggctgac gcccgccgcc ggcggttcct
     2341 gcgcgcttgc gccggcagcg cccgccagca gcatggtggt gatcacgaca gatctaaacg
     2401 cattcatggt ttctctccct ctccttagtt gacggccgga ttgccggggt agcgacgcgc
     2461 aggcgcgagc gccggcgcgc catcggcatg aactgatcgg cagccgcgcg ctcacagcgg
     2521 cagctcgcgt aattgcgccg tggcggccat cacgccgcgc agctcggcga gccccctcag
     2581 gcgtccgatc gccggatagc ccgggtgggt cggcttgccg acgtcgtcga ggagctcgtg
     2641 cccatggtcc ggccgcatcg ggatgcgcca gcgcgggtcg ccggcatcgc gccggcgctt
     2701 ctgctcctcg agcaggat
//
LOCUS       DATAIQ010000444         4726 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_116217, whole genome shotgun sequence.
ACCESSION   DATAIQ010000444 DATAIQ010000000
VERSION     DATAIQ010000444.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4726)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4726)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4726
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_116217"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1353)
                     /locus_tag="VHN20_07355"
     CDS             complement(<1..1353)
                     /locus_tag="VHN20_07355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013500253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malonyl-CoA synthase"
                     /protein_id="HEX2725620.1"
                     /translation="MTGNLFHSIANAITEPAKVAIETSQGERYSYADLVGLTGRLANA
                     LVAHGVKPGDRVAVQVEKSVPALALYLACARAGAVYLPLNTAYTLAELEYFVGDAEPA
                     LVVCDPKQRDGVARIAAGFHARVETLGSDGRGPLMDFAASQPEAFATVERAPDDLAAI
                     LYTSGTTGRSKGAMITHDNLASNALTLKEYWRFTRDDVLLHALPIFHVHGLFVASNVA
                     LVSGATMIFLPKFDPNEIMRFMPRATALMGVPTFYVRLLQHPDLGHETTSHMRLFVSG
                     SAPLLAETHREWKARTGHDILERYGMTETGMNTSNPYDGDRVPGAVGYPLPGVTMRVA
                     DPDNGKLLPTGEIGMLEVKGPNVFKGYWRMPEKTDAEFRKDGFFITGDLGKIDERGYV
                     HIVGRGKDLIITGGYNVYPKEIESEIDAIPGVVESAVIGVPHPDFGEGVTAVVVSGKD
                     A"
     gene            complement(1350..2708)
                     /locus_tag="VHN20_07360"
     CDS             complement(1350..2708)
                     /locus_tag="VHN20_07360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malonyl-CoA decarboxylase"
                     /protein_id="HEX2725621.1"
                     /translation="MPTASFFNDLMHTLGDRSRALLGRSREAIAHGDLVALGELLLSR
                     RGEASGVALARTLLDTYATAPLASRLSFLTALADRFGPDREKLEKALEAYQRDPGAAT
                     VNALHSAAEPRRQELIRRLNLAPGGTVALVRMREELLTHLPARPDFKAVDADFVHLFS
                     SWFNRGFLVLRPIDWTTPANILEKIIRYEAVHAINDWDDLRNRLEPPDRRCFAFFHPQ
                     LAYEPLIFVEVALTGDTPGSIAPLLNTHRTPIRAADASTAVFYSISNTQKGLGGVSFG
                     NFLIKQVVDDLKRELPNLKTFVTLSPVPEFSAWLARERTAKTSSVLSQDASEALRLLD
                     EPGWHADPAKAETVRKALLPAAAYYFLKAKTSRGRPIDPVARFHLGNGARLERLNFLG
                     DASPKALQQAHGLMVNYCYDFDDIEKNHELFAEKGEVVASSAVRKMLRAHLPSPDLAP
                     AK"
     gene            2960..>4726
                     /locus_tag="VHN20_07365"
     CDS             2960..>4726
                     /locus_tag="VHN20_07365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012564649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2725622.1"
                     /translation="MPPIAVAAAPDDPAAASSATGPGLLQVEDLHVHFETSRGTVRAV
                     EGVSYTIRPGEIVALVGESGCGKSVSALSIMRLLAKPAGRVVRGRILFEGRDLLELPE
                     HEMRAIRGRAISMIFQEPMTSLNPVLSIGAQLMEPLQIHLGMDDAAARARAVELLRLV
                     GITDGERRLDQYPHQFSGGMRQRVMIAIGLACDPKLIIADEPTTALDVTIQAQILELM
                     KDLSRRLNIALLVITHNLGIVARYADRVNVMYAARIVEEGTAEQIFGTPRHPYTLGLL
                     RSVPRLDRARDVKLETIEGLPPNLLDPPKTCRFAPRCPYRIAVCDIDPPLLATDAPEH
                     RSACHRAHELPVIATERQKVFAVANSPRATGSDTALLSVRGLTKHFEVRGRGGMAVVR
                     AAEKVSFDIPRGQTLGLVGESGCGKTTVGRLILRLEESTAGEILFDGRDIVKASGAEM
                     KSLRPQIQVIFQDPFSSLNPRMTVGQIIAEPMQVHRIADRKRARERVAELLQQVGLYP
                     YMAERYPHQLSGGQRQRVGIARALGMNPAFIVCDEPVSALDVSIQGQIINLLEDLQER
                     LGLTYLFIAHDLAVVRHISHRVV"
BASE COUNT          785 a         1547 c         1617 g          777 t
ORIGIN      
        1 ggcatccttg ccggacacga caacagccgt gaccccttcg ccgaaatccg gatgcggcac
       61 gccgatcacg gcgctttcga cgacgccggg gatggcgtcg atctcgctct cgatctcctt
      121 gggatagacg ttgtagccgc cggtgatgat cagatccttg ccgcggccga cgatatgcac
      181 gtagccgcgc tcgtcgatct tgccgaggtc gcccgtgatg aagaagccgt ccttgcggaa
      241 ctcggcgtcg gtcttctccg gcatgcgcca ataacccttg aacacgttcg ggcccttcac
      301 ctcgagcatg ccgatctccc ccgttggcag cagcttgccg ttatccgggt cggcgacccg
      361 catggtgacg ccgggaagcg gatagccgac cgcgccgggc acgcggtcgc cgtcatacgg
      421 gttcgaggtg ttcatcccgg tctcggtcat gccgtagcgt tcgaggatgt cgtggccggt
      481 gcgcgccttc cattcgcgat gcgtctcggc gaggagcggc gccgagccgg acacgaacag
      541 gcgcatgtgg ctggtcgtct cgtggccgag atccgggtgc tgcaggaggc gcacgtagaa
      601 ggtcgggacg cccatcagcg cggtggcacg cggcatgaag cgcatgatct cgttcggatc
      661 gaacttcggc aggaagatca tcgtggcgcc ggaaaccagc gccacgttgc tggcgacgaa
      721 cagtccgtgc acgtgaaaga tcggcaaggc gtgcagcagc acgtcgtccc tggtgaagcg
      781 ccaatactcc ttcagggtca gcgcgttcga ggcgaggttg tcgtgcgtga tcatcgcgcc
      841 tttggagcgg ccggtcgtgc ccgacgtgta gaggatggcg gccaggtcgt cgggggcgcg
      901 ctcgaccgtg gcgaatgcct ccggctgcga cgcggcgaag tccatcagcg gcccgcggcc
      961 atcgctgccg agggtctcga cgcgggcgtg aaaaccggcc gcgatccggg cgacgccgtc
     1021 gcgctgcttc gggtcgcaca ccaccagcgc cggctcagcg tcaccgacaa aatactcgag
     1081 ctcggcgagc gtgtaggccg tgttcagcgg caggtagacg gccccggcgc gcgcgcaggc
     1141 aagataaagc gcaagcgccg gcacggattt ctcgacctgc accgccaccc ggtcgcccgg
     1201 cttgacgcca tgcgccacga gcgcgttggc gaggcggccc gtcagcccga cgagatcggc
     1261 gtagctgtaa cgctcgccct gggacgtctc gatcgcgacc ttggcgggct cggtgatcgc
     1321 gttggcgatg gaatggaaga gattgccggt cattttgcag gtgctaggtc cggggacgga
     1381 agatgcgcac gcagcatctt gcggacggcc gaggaggcga cgacctcgcc cttttcggcg
     1441 aacagctcgt ggttcttctc gatgtcgtcg aagtcatagc agtagttgac catgagtcca
     1501 tgcgcttgtt gcagcgcttt cggcgaggcg tcgccgagga agttgagccg ctcaaggcgc
     1561 gcgccgttgc cgaggtggaa gcgcgccacg ggatcgatcg gccgccctct cgaggtcttc
     1621 gccttgagga agtaataggc ggctgcgggc agaagcgcct tgcgcaccgt ctcggccttg
     1681 gccggatccg catgccagcc tggctcgtcg aggagacgca aggcctcgct cgcgtcctga
     1741 ctgaggaccg aagaggtctt ggccgtgcgc tcgcgggcca gccaggcgga gaattccggc
     1801 accggcgaga gcgtcacgaa ggtcttcagg ttcggaagct cgcgtttcag gtcgtcgacc
     1861 acctgcttga tcaggaagtt tccgaaggaa acgccgccca agcccttttg cgtgttggag
     1921 atggaataga agacggcggt gctcgcgtcc gcggccctga tcggggtgcg gtgcgtgttg
     1981 agcagcggcg cgatcgaacc gggcgtatcg ccggtcagcg ccacctcgac gaagatcagc
     2041 ggctcgtagg cgagctgcgg atggaagaag gcgaagcagc gccggtccgg aggctccagc
     2101 cggttgcgca gatcgtccca gtcattgatg gcgtgcaccg cctcgtagcg gatgatcttt
     2161 tcgagaatgt tggccggagt cgtccagtcg atcgggcgca gcacgagaaa gccgcggttg
     2221 aaccacgacg agaacagatg cacgaaatcg gcgtccacgg ccttgaagtc gggacgggcg
     2281 ggaaggtgcg tgagcaattc ctcgcgcatg cgcaccagcg ccacggtgcc gcccggcgcc
     2341 agattgaggc gccggatgag ctcctggcgc cggggttccg cggcgctgtg cagggcattc
     2401 acggtggcgg cgccagggtc gcgctgatag gcctccaacg ccttctcgag cttctcccgg
     2461 tcggggccga agcggtcggc gagcgcggtc aggaaggaca ggcgagaggc cagcggcgcc
     2521 gtcgcatagg tgtcgagcaa agtccgcgcg agcgcgacgc ccgaagcctc gccgcgccgt
     2581 gacaggagca gctcgccaag cgccaccagg tcgccatgcg cgatcgcctc gcgcgatcgc
     2641 ccgagcagcg cacggctgcg gtcgccgagc gtatgcatga ggtcgttgaa gaatgaagct
     2701 gtcggcatcg atcacggtct cgtcggcgcg ggcacgcacc cgcatcagcg cgcccggcaa
     2761 ccaagtggcg atccccggaa aggaccacaa gatcaggggc gcctcaagcg ggacgaggcg
     2821 agagggtaac cgccgcggca ccttccctcg ctggcggggt tgataagggc accggtttgc
     2881 cggcaggatg cgcccttcgc agccgggtcc gggacgggat tcggcacgat caagccccta
     2941 gcgccgacca aaaaatttca tgcccccgat tgccgtagcg gccgcccccg acgacccggc
     3001 tgctgcctcg tcagcgaccg gccccggcct gctgcaggtc gaggatctgc acgtgcattt
     3061 cgagacctcg cgcggcacgg tgcgggcggt cgagggcgtc agctacacga tccggcccgg
     3121 agagatcgtc gccctggtcg gcgagtcggg ctgcggcaag tcggtttccg cgctcagcat
     3181 catgcgcctg ctggccaagc cggcgggacg ggtggtgcgc ggccgcatcc tgttcgaggg
     3241 ccgcgatctc ctcgaattgc ccgaacacga gatgcgcgcc attcgaggtc gtgccatctc
     3301 catgatcttc caggagccga tgacctcgct gaatccggtg ctcagcatcg gcgcgcagct
     3361 catggagccg ctgcagatcc acctcgggat ggacgacgcc gccgcgcgtg cgcgagccgt
     3421 cgaactcctg cggctggtag gcatcaccga cggcgagcgc cgcctcgacc agtatccgca
     3481 tcaattctcc ggcggcatgc gccagcgcgt catgatcgcc atcgggcttg cctgcgatcc
     3541 gaaactgatc atcgccgacg agccgacgac ggcgctcgac gtcaccatcc aggcgcagat
     3601 cctcgagctg atgaaggacc tgtcgcggcg gctcaacatc gcgctgctcg tgatcaccca
     3661 taacctcggg atcgtggcgc gttatgcgga ccgcgtgaac gtcatgtatg ccgcgcgcat
     3721 cgtcgaggag ggaaccgccg agcaaatctt cggcacgccg cggcatccct acacgctcgg
     3781 cctgctgcgt tccgttccgc ggctcgaccg cgccagggac gtgaaactcg agaccatcga
     3841 aggcctgcca ccgaacctgc tcgacccgcc gaagacctgc cgcttcgcgc cgcgctgccc
     3901 gtaccgcatc gccgtctgcg atatcgaccc gccgctgctt gcgaccgacg cgccggagca
     3961 tcgttccgcc tgccatcgtg cgcacgagct gccggtgatc gcgacggaac ggcagaaggt
     4021 ttttgcggtc gcgaattcgc cgcgcgcgac cggcagcgac acggcgctgc tgtcggtgcg
     4081 cggcttgacg aagcatttcg aggtccgtgg gcgcggcgga atggccgtcg tgcgcgcggc
     4141 cgaaaaagtc tcgttcgaca tcccgcgcgg gcagacgctc ggccttgtcg gcgaatccgg
     4201 gtgcggcaag acgacggtcg ggcgcctgat cctgcggctc gaggagtcga ccgccggcga
     4261 gatcctgttc gatggtcgcg atatcgtgaa ggcctcgggc gccgagatga agtcgttgcg
     4321 cccgcagatc caggtgatct tccaggaccc cttctcgtcg ctcaacccgc gcatgacggt
     4381 cggccagatc atcgccgaac cgatgcaggt ccatcgcatc gccgatcgca agcgggcaag
     4441 ggaacgggtg gccgagttgc tgcagcaggt cgggctctat ccgtatatgg ccgaacgcta
     4501 cccgcaccag ctctcgggcg gtcagcgcca gcgcgtcgga attgcccgcg ccctcggcat
     4561 gaatccggcc ttcatcgtgt gcgacgagcc ggtgtcggcg ctcgacgtgt cgatccaggg
     4621 gcagatcatc aatctcctcg aggacctgca ggagcgcctc ggcctgactt acctgttcat
     4681 cgcccacgat ctcgccgtcg tgcgccatat ttcgcaccgc gtcgtc
//
LOCUS       DATAIQ010000445         1962 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_392716, whole genome shotgun sequence.
ACCESSION   DATAIQ010000445 DATAIQ010000000
VERSION     DATAIQ010000445.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1962)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1962)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1962
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_392716"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            132..800
                     /locus_tag="VHN20_07370"
     CDS             132..800
                     /locus_tag="VHN20_07370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019903441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX2725623.1"
                     /translation="MTGPVPPLRAAIVPVTPLQQNCTLLWCTATMRGAFVDPGGDLDR
                     LKAAAAQHGVTIEKILLTHGHIDHCGQAGILAGELGVEIEGPHEDDRFWIARLEEDGR
                     NYGIGGKPFEPARWLNDGDQVTVGELTLDVRHCPGHTPGHVVFHHAPSKLAIVGDVLF
                     AGSIGRTDFPLGNHQDLLDSITQRLWPMGAETAFIPGHGPMSTFARERAGNPFVGDRV
                     LAGA"
     gene            935..1114
                     /gene="rpmF"
                     /locus_tag="VHN20_07375"
     CDS             935..1114
                     /gene="rpmF"
                     /locus_tag="VHN20_07375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017977281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HEX2725624.1"
                     /translation="MAVPKRKTSPSKRNMRRSHHALKPAAFQECSNCGELKLPHNLCT
                     ACGHYNGREIVQNEG"
     gene            1140..>1962
                     /gene="plsX"
                     /locus_tag="VHN20_07380"
     CDS             1140..>1962
                     /gene="plsX"
                     /locus_tag="VHN20_07380"
                     /EC_number="2.3.1.274"
                     /inference="COORDINATES: protein motif:HMM:TIGR00182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043811 - phosphate:acyl-[acyl carrier
                     protein] acyltransferase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HEX2725625.1"
                     /translation="MASSPRIAIDAMGGDIGPAVIVGGMSRARRANRALRFELYGDEK
                     AIAPELDRYKGLAQAVTVHHTTESISATEKPSQAIRRAKGTSMGMAINAVKEGHADAA
                     LSAGNTGALMAIAKLALRTMPGIDRPALAALLPTLGQTDLIMLDLGANTECDAQNLVQ
                     FSVMGAAYARTVLEIDRPRVKLLNIGTEELKGTDELKEAAAMLREADYLPLRFDGFTE
                     GDKLSRGDVDVVVTDGFSGNIALKTAEGTARFVTDLLKRAFTSSLRSKAGFALSRP"
BASE COUNT          352 a          656 c          627 g          327 t
ORIGIN      
        1 ctgcgcggcc agggccggac cgtctggtat ttggtcggcg agaacgaagg ccacggcttc
       61 gccaagaagg agaaccagga ctatctgttc tggaccaccc tgatgttctg ggaccagacc
      121 ctactcaagc gatgaccggc cccgtcccgc cgctgcgcgc cgcaatcgtc ccggtcactc
      181 cgctgcagca gaattgcacc ctgttgtggt gcaccgcgac gatgcgcggc gcgttcgtcg
      241 atcccggcgg cgacctcgac cgcttgaagg ctgcggccgc tcagcatggt gtgacgatcg
      301 agaagatcct gctcactcac ggtcatatcg atcattgcgg ccaggccggg atcctcgccg
      361 gggagcttgg cgtggagatc gaggggcccc acgaggacga ccggttctgg attgcgcggc
      421 tggaggagga tgggcggaac tatggaatcg gcggcaagcc cttcgagccg gcgcgatggc
      481 tcaatgacgg cgaccaagta acggtcggtg aactgacact cgatgtgcgc cattgccccg
      541 gccacacgcc gggccatgtc gtcttccacc atgcgccctc gaagcttgca atcgtcggcg
      601 acgtgctgtt cgccggatcg atcggccgca ccgattttcc gctcggaaat caccaggacc
      661 tgctcgattc gatcacccag aggctgtggc cgatgggcgc cgagacggcc ttcatccccg
      721 gacacgggcc gatgtcgacc ttcgcccggg aacgggccgg caatccgttc gtcggcgaca
      781 gggtgcttgc aggggcctga accggcttgc gtcccccgcc catttcgcta tagggcgcac
      841 tcgttcgcga cgatccggcc gccgccgcgg gtttacccga tgagctgggc gagggtggtc
      901 gccaattttt ttggcaaagt agcaaggtgc cgcaatggcc gtccccaaga gaaaaacctc
      961 gccttccaag cgtaacatgc gtcgcagcca tcatgcgctg aagcccgccg cgttccagga
     1021 atgcagcaat tgcggcgaac tgaaactgcc gcacaacctg tgcacggcct gcggccatta
     1081 taatggccgc gagatcgttc agaacgaagg ctgagcggac ggcgaagggg cacgctgaca
     1141 tggcgtcaag cccgcgcatc gctatcgacg ccatgggcgg ggacatcggt ccggcggtaa
     1201 tcgtcggcgg aatgtcgcgc gcgcgccgcg ccaaccgcgc tctgcgcttc gagctctacg
     1261 gggatgaaaa ggcgatcgcg ccggagctcg accgctacaa gggcctcgcc caggccgtca
     1321 ccgtccacca cacgaccgag tccatttccg cgaccgaaaa gccgagccag gccatccgcc
     1381 gcgccaaggg cacgtcgatg ggaatggcga tcaacgcggt caaggaaggc cacgccgacg
     1441 ccgccttgtc ggccggcaac accggcgcgt tgatggccat tgccaagctc gcgctcagga
     1501 ccatgccggg catcgaccga ccggcgcttg ccgccttgct tccaaccctc ggccagaccg
     1561 atctcatcat gctcgatctc ggcgccaata ccgagtgcga cgctcagaac ctggttcagt
     1621 tctcggtcat gggcgcggcc tatgcccgca cggtgcttga aatcgatcgc ccgcgcgtca
     1681 agctgctcaa catcggtacc gaggagctga agggcacgga cgagctgaag gaggccgcgg
     1741 ccatgctccg cgaggccgac tatctgccgc ttcgcttcga cgggttcacc gaaggcgaca
     1801 agctttcgcg cggcgatgtc gacgtggtcg tcaccgacgg cttttccggc aatatcgcgc
     1861 tcaagaccgc cgagggcaca gcgcggttcg tgacggatct gctgaagcgc gccttcacgt
     1921 cctcgctccg gtccaaggcc ggttttgcgc tgtcccggcc cg
//
LOCUS       DATAIQ010000446         7288 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_438758, whole genome shotgun sequence.
ACCESSION   DATAIQ010000446 DATAIQ010000000
VERSION     DATAIQ010000446.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 7288)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7288)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7288
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_438758"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..255
                     /locus_tag="VHN20_07385"
     CDS             <1..255
                     /locus_tag="VHN20_07385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003614118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HEX2725626.1"
                     /translation="MQMKMFLTRLGEGSRMIINGDPTQIDLPPGQKSGLIEAVRILSG
                     VEGIGRVVFREADVVRHDLVRRIVTAYDEAGRAKSDHRQP"
     gene            252..740
                     /gene="ybeY"
                     /locus_tag="VHN20_07390"
     CDS             252..740
                     /gene="ybeY"
                     /locus_tag="VHN20_07390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HEX2725627.1"
                     /translation="MTELEVIIENGEWASLGDADALARRAVDAALAVAANAPRDPLEI
                     SVLLSDDASVRDLNRRWRGLDKPTNVLSFPASAPPLPGGARPLGDLVLAWETVAREAK
                     EEGKLVADHLTHLVVHGTLHLLGYDHETEHEAETMEAREIEALARLGIANPYHDVAAR
                     IA"
     gene            753..1811
                     /locus_tag="VHN20_07395"
     CDS             753..1811
                     /locus_tag="VHN20_07395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin family protein"
                     /protein_id="HEX2725628.1"
                     /translation="MSDDPSPVDRLLPPAGDPGAARERWYERLLHRLHLKSRESIRDD
                     LEDALADTEEDPDFSPKERTMLKNVLGLHRIRVDDVMVPRADIIAVASDTSLGELLGV
                     FRTAGHSRLPVYGETLDDPKGMVHIRDFVEFVAARAEGANAGTPEVRREVDGTPSLGG
                     VDLSVTLATAKILRPVLYAPPSMPAIDLLVRMQATRTHIALVIDEYGGTDGLVSIEDL
                     VEIVVGDIEDEHDDAVARMIVSADDKTFIADGRASLEEVSETLGIDLAGDDMAEEIDT
                     LGGLIGTLAGRVPSRGELVAGPNGLEFEVLDADPRRLKRVRIHRRETPLEGASPDETG
                     TRAAAAAARRSGADGSPA"
     gene            1808..3454
                     /gene="lnt"
                     /locus_tag="VHN20_07400"
     CDS             1808..3454
                     /gene="lnt"
                     /locus_tag="VHN20_07400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017486450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016410 - N-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006497 - protein lipidation [Evidence
                     IEA];
                     GO_process: GO:0042158 - lipoprotein biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HEX2725629.1"
                     /translation="MTALAQRVILVWGWQRVLCAFLAGAAGALAMPPFGFLPALAASL
                     TLAVWLIDGAATGQRYRTAATLLSAAIAGWWWGFGYFVAGLWWLGAAFLVEAEEFAWA
                     LPFGVVGLPALLAFFPAFGFGVARLLWSPGAGRLFALAFGLTASEWLRGTLFTGFPWN
                     TLGMALAQNAWLMQSASIVGLYGLTVLAIVICAAPATLGAGAPRMRVLAPALAVAGLI
                     GLALFGAWRIPTEPSPLVAGVKLRIMQPNLQQDAKFGPENRDEIMRRYLTLSDRATSP
                     QSTGVADATHLIWPESAFPFLLHRDAAALAQLAALLPLGTVLITGAAREGEPGSDGTT
                     RRFHNSIHVVADDGTIVGTYDKVHLVPFGEYFPHFLDSALRGLGIRQFVHIPGGFEPG
                     DRRVSLPIPGLPAVAPTICYEAIFPGAIVGPGSQPGLILNVTNDAWFGNTPGPYQHFA
                     QARLRAIEEGLPLVRAANTGISAVVDAHGRVVASLPLGIEGVLDMGLPSAIPPPPFAR
                     FGNLLVVALVLCCWLAALIARRVPRRRPFGGKAAPAAERA"
     gene            3471..3914
                     /locus_tag="VHN20_07405"
     CDS             3471..3914
                     /locus_tag="VHN20_07405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018264936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX2725630.1"
                     /translation="MTKKAPNPIDKHVGSRVRMRRMLVGMSQEKLGEALGLTFQQVQK
                     YEKGTNRIGASRLHHIASILGVPIDFLYQGAPRMEASASGAADEQASADLSEFLSSSD
                     GVELMRGFLAIKDAKVRRRVVELVACLSQQVGETAAAPALRRTGS"
     gene            3998..4672
                     /gene="trmB"
                     /locus_tag="VHN20_07410"
     CDS             3998..4672
                     /gene="trmB"
                     /locus_tag="VHN20_07410"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015951692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008176 - tRNA
                     (guanine(46)-N7)-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HEX2725631.1"
                     /translation="MSGTASQTHGAFYGRRKGKRLRSGQDELVTTLLPLLRVDPARAV
                     TGWQGRPVWLEIGFGGGEHLAAQARAHPEIGFIGCEPFVNGVAKILGVIEREGLQNIR
                     IWDDDATALLDRLPPASIGRAYLLYPDPWPKRRHRKRRFISPENLAALARVMSPGAEL
                     RFATDIDDYAGWALSRVLRSPAFRWTAERADDWRRPWPDWSGTRYEAKALGEQRSPVY
                     LTFERT"
     gene            complement(4648..5778)
                     /locus_tag="VHN20_07415"
     CDS             complement(4648..5778)
                     /locus_tag="VHN20_07415"
                     /inference="COORDINATES: protein motif:HMM:NF021603.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2336 domain-containing protein"
                     /protein_id="HEX2725632.1"
                     /translation="MSPLAKLIGELETSIARGSPERRARTLRSVTDLFLQDPEALSER
                     QVELFDTVITRLATAIEARARAELAERLAGVVNAPRGIVRSLAHDQIVVARPILTRSD
                     RLSDDDLIAVALAKGRDHMLAISERSTLSEPVTDVLVSRGDRVVAHAVAGNPGARLSR
                     MGAAALLNRACADEALQTLLSRREDLPEPYMRQLMAIATETARRRLAQTMPESAQRSV
                     NLAVEQSARTVESAVSSGRDYGEAFKKVHAISEDRRLEERDLVSFAAQSFEETVCAVA
                     VVVGLSIAASERLFDGSETDLLLVVGKSQGWAWRTLRSLLQLRGPQAASPQNLRRAQE
                     IYDQLAPATAQRVVHFLKVREEAERRAAEEAAAKRQVRSNVK"
     gene            complement(5941..7047)
                     /locus_tag="VHN20_07420"
     CDS             complement(5941..7047)
                     /locus_tag="VHN20_07420"
                     /inference="COORDINATES: protein motif:HMM:NF021603.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2336 domain-containing protein"
                     /protein_id="HEX2725633.1"
                     /translation="MSNWGSFVNEVEDAVASGDPIKRVDTLRRMTNLFVEQAPHLKET
                     HVSVFDEVILRLARDLEFKARVELSERLADIGNAPRKVVRDLAFDSDIKVAGPVLERS
                     ARLDEEDLVAIAHDRGQDHLYALSRRPTLSERVTDILVDRGDQRVVQSVAGNEGARFS
                     ERGFGQLMTKARGDAALQGILQARQDIPPKQMKELVAIAREKVRESLQQEFAETADDL
                     IDAAVDDVAGLVAETADAKMLMNDFEVANAVVRQKARSGGLVEDDVVDWIKAGKMEEA
                     IAAMAHLASVPPEMVARAYHAAHYDPLLFIVRSIKFGWGTFKLLLTAKAGRQPSSDVI
                     KSAFDSFQQLSVQTAQRVVKFTAVREQAMQPNAA"
BASE COUNT         1164 a         2494 c         2365 g         1265 t
ORIGIN      
        1 atgcagatga agatgttcct gacgcgcctc ggcgaagggt cgcgcatgat catcaacggc
       61 gatccaaccc agatcgatct gccccccggg cagaagtcgg gcctcatcga ggctgtgcgc
      121 atcctgtccg gcgtcgaagg catcggtcgc gtcgtcttcc gcgaggcgga cgtggtgcgc
      181 cacgatctcg tgcggcgcat cgtcaccgct tatgatgaag ccggccgcgc caagagcgac
      241 catcgacagc catgaccgaa ctcgaggtga tcatcgaaaa cggcgagtgg gccagcctcg
      301 gcgatgccga cgcactggcg cgacgagcgg tcgacgcggc gctcgcggtg gccgccaacg
      361 ctccgcgcga tcccctcgag atcagcgtcc tcttgagcga cgatgcatcc gttcgggacc
      421 tgaatcgcag gtggcggggt ctcgacaagc cgaccaacgt gctgtcgttc ccggccagcg
      481 cgccgcccct tcccggcggc gctcgtccgc tgggcgacct cgtgctcgcc tgggaaacgg
      541 tggcgcgcga ggccaaggag gaaggcaagc ttgtcgccga ccacctcacg catctcgtcg
      601 ttcacggcac gctgcatctt ctcggctacg accacgagac cgagcacgag gccgagacga
      661 tggaggcgcg cgagatcgag gccctggcgc gcctcggtat tgccaacccc tatcatgatg
      721 tcgctgcccg aatcgcctga tccgactgcc tgatgagcga cgacccgagt cccgtagacc
      781 gcctcctgcc gccggccggc gatcccggag ccgcgcgtga gcgatggtat gagcgcctcc
      841 tccaccgcct gcatctgaaa tcgcgcgagt cgatccgcga cgatctcgag gatgccctcg
      901 cggacacgga ggaagacccc gacttctcgc ccaaagaacg cacgatgctc aagaacgtgc
      961 tcgggctgca tcgcatccgc gtcgacgacg tgatggtccc gcgcgccgac atcatcgccg
     1021 ttgccagcga cacgagcctt ggcgagcttc tcggagtgtt ccgcacagcc gggcattcac
     1081 ggctgcccgt ctacggcgaa accctcgacg atcccaaagg catggtccac atccgcgact
     1141 tcgtcgagtt tgtcgcggcg cgcgccgaag gcgccaacgc agggacgccg gaggtacgcc
     1201 gcgaggtcga tggcacgccg agcctgggcg gcgtcgacct ctcggtcaca ctcgcaaccg
     1261 ccaagatcct gcgacccgtg ctgtatgcgc ccccctccat gccggcgatc gaccttctcg
     1321 tgcgcatgca ggcgacccgc acgcatatcg cgctcgtgat cgacgaatac ggcgggaccg
     1381 acggcctcgt ctcgatcgag gatctcgtcg agatcgtggt gggcgacatc gaggacgagc
     1441 acgacgacgc cgtggcgcgc atgatcgtga gcgccgatga caaaaccttc atcgccgacg
     1501 gtcgcgccag cctcgaggaa gtgtcggaga cgctcggcat cgatctcgcc ggtgacgaca
     1561 tggccgagga aatcgatacg ctcggcggcc tgatcggcac cctcgccggc cgcgtgccgt
     1621 cgcgcggcga actcgtggcc gggccgaacg ggctcgaatt cgaggtgctc gatgcagacc
     1681 cgcggcgcct caagcgcgtg cgcatccatc gccgcgaaac acccctcgaa ggcgcctcgc
     1741 cggacgaaac cggcacgcgc gctgccgcgg cggccgccag gcgctccgga gccgacggtt
     1801 cgccggcatg accgcgctcg cgcaacgcgt catcctcgta tggggatggc agcgcgttct
     1861 gtgcgcgttc ctcgcaggag cggccggcgc gctcgccatg ccgcctttcg ggtttcttcc
     1921 ggcgcttgcc gcttcgctca ccctcgcggt ctggctgatc gacggggcgg cgacgggcca
     1981 acgctaccgc accgcggcca cgctcctgtc cgcagcaatc gccggctggt ggtggggctt
     2041 cggttatttc gtcgccggac tgtggtggct tggcgcggcg tttctcgtcg aggccgagga
     2101 gtttgcgtgg gcgctaccgt tcggcgtcgt cggcctcccg gcactgctgg cattcttccc
     2161 tgctttcggc tttggcgtcg cgcgtctcct gtggtcgccc ggcgccggcc ggcttttcgc
     2221 cctcgccttc ggcctgaccg cgagcgagtg gctgcgcgga accctcttca cgggctttcc
     2281 gtggaacacg ctcgggatgg cgctggcgca gaatgcgtgg ctgatgcaga gcgcatcgat
     2341 cgtcggcctc tacggtctca ccgtgctagc catcgtcatc tgcgcggcgc cggcgactct
     2401 gggcgcggga gcgccgcgca tgcgtgtcct ggcgccggcg ctcgccgtcg cgggcctcat
     2461 cggcttggcg ctattcgggg catggcgcat cccgacggag ccctcgccgc tcgtagccgg
     2521 cgttaagctc cgcatcatgc aaccgaacct gcagcaagac gccaagttcg gtcccgagaa
     2581 ccgggacgag atcatgcgcc gttatctgac gctgagcgac cgggcgacgt cgccgcagtc
     2641 gaccggcgtc gccgacgcga cgcatctgat ctggccggaa tcggcgtttc cgtttctgct
     2701 gcatcgcgac gccgccgcgc tggcccagct cgcggcgctg ctcccgcttg gcacggtcct
     2761 gatcaccggc gctgcccgcg aaggcgagcc ggggtcggac ggcacgacgc gtcgcttcca
     2821 caactcgatc catgtcgtcg ccgacgatgg caccatcgtc ggcacctatg acaaggtgca
     2881 tctcgttccg ttcggcgagt attttccgca ctttctcgac agtgcgctgc gcggccttgg
     2941 catccggcag ttcgtccata tccccggcgg cttcgagccc ggcgaccgtc gcgtcagcct
     3001 gcctattccg gggctacccg cggtcgcgcc cacgatctgc tacgaggcga tttttccggg
     3061 ggcgatcgtc gggcctggat cgcagcccgg cctgatcctc aacgtcacga acgatgcctg
     3121 gttcggcaac acgcccggcc cgtatcagca ctttgcgcag gcgcgtctga gggcgatcga
     3181 ggaagggctg ccgctcgtcc gcgctgcgaa cacaggcatt tccgcggtgg tcgatgcaca
     3241 cggccgcgtt gtcgcatccc tgccgctcgg catcgaaggt gtgctcgaca tgggcctgcc
     3301 gagcgcgatt ccgccaccac ccttcgcccg cttcggcaat ctgcttgtcg tggccctcgt
     3361 tctatgttgt tggttggccg cgttgattgc ccgccgcgtg ccgcgccggc gaccgttcgg
     3421 cgggaaagcc gcaccggcag cggaacgggc ctgacaggga gcccagacaa atgaccaaga
     3481 aggcgccgaa tcccatcgac aagcacgtgg gcagccgcgt gcgcatgcgc cgcatgctcg
     3541 tcggcatgag ccaggagaag ctcggcgagg cgctcggtct cacgttccaa caggtgcaga
     3601 aatacgagaa ggggacgaac cgcatcggag ccagccgcct gcaccacatc gccagcattc
     3661 tcggcgtccc gatcgatttt ctctatcagg gcgcgccccg catggaagca agtgcatcag
     3721 gcgcagccga cgagcaggca tcggccgacc tgtccgaatt cctttcatcg tcggacggtg
     3781 tcgagctgat gcgaggcttt cttgcgatca aggacgcaaa ggtccgccgc cgggtcgtcg
     3841 agctggtcgc gtgcctcagc caacaggtcg gtgagacggc cgctgcaccg gccttgagac
     3901 gcacgggctc gtaggccgct tcaaatcggt cggcccgctt gattccatcg cgtcgcgccc
     3961 ggccaagggt gacacgcgct cctcgttaca aggaccaatg agcgggacag cttcgcagac
     4021 gcatggcgcg ttctatggcc gtcgcaaggg caagcgcctg cgcagcggcc aggacgagct
     4081 cgtgacgacg ctgctgccgc ttttgcgggt cgatccggcg cgcgcagtga caggttggca
     4141 gggccggccc gtttggctcg aaatcggctt tggcggcggc gagcaccttg ccgcacaggc
     4201 gcgggcgcat ccggagatcg gcttcatcgg ctgcgagccg ttcgtcaacg gcgtcgccaa
     4261 gatcctcggc gtgatcgagc gcgaaggact gcaaaacatt cgcatctggg acgacgatgc
     4321 gacggctttg ctcgatcggc tcccgccggc ttccatcggc cgggcgtatc tgctctatcc
     4381 cgacccatgg ccgaagcggc ggcatcgcaa gcgccgcttc atctcgcccg aaaatctcgc
     4441 ggcgttggcg agagtgatgt cgcccggcgc cgagcttcgc ttcgcgaccg acatcgatga
     4501 ttacgccggc tgggcgctgt cccgcgtctt gcgctcgccg gcgttccgat ggacggccga
     4561 gcgcgccgat gactggcgaa ggccgtggcc ggactggtcg ggcacacgct acgaagccaa
     4621 ggctctcggc gagcagcgaa gcccggtcta cttgacgttc gaacggacct gacgtttggc
     4681 ggctgcctct tcggcagcac gccgctctgc ctcttcacgc accttcagaa aatgcaccac
     4741 gcgttgtgcg gttgccggcg cgagctgatc gtagatttcc tgcgcgcggc gcagattttg
     4801 cggcgatgca gcttgggggc cgcgcagctg caggagggac cgcagcgtgc gccaggccca
     4861 tccttgcgat ttgccgacga cgagcagcag gtccgtctcg cttccgtcga acagccgctc
     4921 cgatgcagcg atcgagagac cgacgacgac ggcgacggcg cacacggtct cctcgaagct
     4981 ctgcgcagcg aagctcacga gatcgcgctc ctctagccgc cgatcttcgc tgatggcatg
     5041 aaccttcttg aatgcctcgc catagtcgcg gccgctcgac actgcggatt cgaccgtgcg
     5101 cgcgctctgc tccacggcaa ggttgaccga ccgctgtgcg gattccggca tcgtctgagc
     5161 gagacggcgc cgggcggttt ccgtcgcaat tgccatgagc tggcgcatat agggctcggg
     5221 cagatcctcg cgccggctga gcagagtctg caacgcctcg tcggcgcagg cgcggttcaa
     5281 caacgccgcc gcgcccatgc gcgacaggcg agcgccggga tttccggcga cggcgtgagc
     5341 cacaacgcgg tcgccgcgcg aaaccagcac gtcggtcacc ggctcgctca gcgtggagcg
     5401 ctcggaaatc gccagcatat ggtcgcgccc cttggcgagg gccaccgcga tgaggtcgtc
     5461 gtcggacagg cggtccgagc gggtcaggat cgggcgcgcg acgacgatct gatcgtgcgc
     5521 aagcgaacgg acgatgccgc gcggtgcgtt gacgaccccg gcgagacgct cggccagctc
     5581 cgcgcgtgcg cgcgcttcaa tggcggtcgc gaggcgcgtg atcaccgtat cgaacagctc
     5641 gacctgacgc tcgctcagcg cttccggatc ttgcagaaac aggtcggtga cgctgcgcaa
     5701 ggttctcgcg cgacgctcgg gcgagccgcg cgcgatagac gtctcgagct cgccaatcag
     5761 cttcgccaac gggctcatga acgctccgat tcccacctgt caggagcctc tgacccgccc
     5821 atcagacgca cgacgttacg cttgcaaaac ttttctggag cggggtgcct tcgagccgga
     5881 tcgctcccgc cccggtttcg tttccttcgg caaagcgtgt ccgctttgcc gaagcatgtg
     5941 tcaggccgcg ttcggctgca tcgcctgctc gcgcaccgcc gtgaacttga cgacgcgctg
     6001 cgccgtctgc accgacagtt gctggaagct gtcgaaggcg ctcttgatca cgtcggaaga
     6061 gggctgccgt ccggcctttg ccgtcagcag cagcttgaac gtgccccatc cgaacttgat
     6121 cgaacgcacg atgaagagca gcggatcgta atgcgcggcg tggtaggcgc gcgccaccat
     6181 ctcaggcggc acgctcgcaa gatgcgccat cgcggcgatc gcttcctcca tcttgccggc
     6241 cttgatccag tcgaccacgt cgtcctcgac cagaccgccg gaccgcgcct tctggcgcac
     6301 gaccgcgttg gccacctcga agtcgttcat caacatcttg gcgtccgccg tctcggcgac
     6361 cagtccggca acgtcgtcga cggccgcatc gatgagatca tcggccgtct cggcgaattc
     6421 ctgctgcaat gactcgcgca ccttctcgcg cgcgatggcg accagctcct tcatctgttt
     6481 cggcggaatg tcctgacgcg cctgaaggat gccctgcagg gccgcatccc cgcgggcctt
     6541 ggtcatcagc tggccgaagc cgcgctccga gaaacgcgcg ccttcgttgc cggcgaccga
     6601 ctgcacgacg cgctggtcgc cgcggtcgac caggatgtcg gtgacgcgct cgctgagagt
     6661 cgggcggcgg gacagcgcgt agagatggtc ctggccgcga tcatgggcga tggcgacgag
     6721 atcttcctca tcgagccgcg cggagcgttc gagcacgggc cccgcaacct tgatgtcgct
     6781 gtcgaaggcg aggtcgcgaa cgaccttgcg cggtgcattg ccgatgtcgg cgagacgttc
     6841 ggacagctcg acgcgggcct tgaactcgag atcgcgcgca agccgcagga tcacttcgtc
     6901 aaaaaccgaa acatgcgtct ctttgaggtg aggggcctgt tccacgaaca ggttggtcat
     6961 gcgccgcaac gtgtcgacac gcttgatcgg gtctccgctc gcgaccgcgt cctcgacctc
     7021 gttaacaaag gaaccccagt tactcatgga aactccgcaa cacggcgcga aactccgcaa
     7081 cggcgcgcat tgggaagtta ccaaaaaggc gtaaccgaaa tgttatgcgc ctgccctcgc
     7141 ggatggcatt cggaagcctt tcgaggccct gccgggcctt gcattaagcc attattgttg
     7201 ctaaatatgc tttgtcagct ctggttgcag catttgctgc ggttcaggag cgggcccgcc
     7261 cgggtcccgc tcttttttat ttccgcag
//
LOCUS       DATAIQ010000447         1618 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_149679, whole genome shotgun sequence.
ACCESSION   DATAIQ010000447 DATAIQ010000000
VERSION     DATAIQ010000447.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1618)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1618)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1618
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_149679"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..346
                     /locus_tag="VHN20_07425"
     CDS             <1..346
                     /locus_tag="VHN20_07425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018268932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SAF domain-containing protein"
                     /protein_id="HEX2725634.1"
                     /translation="LIGLELSISVLSAALRGEPTGATRQWRGDVASVAKRPLRAGEML
                     DGEGGYTVYGKLMPAAASRAEGVLPIGLAHRVKLKRDIAAGGLVRMSDVELDETSLAV
                     RTRRDLERLNDM"
     gene            428..1573
                     /locus_tag="VHN20_07430"
     CDS             428..1573
                     /locus_tag="VHN20_07430"
                     /EC_number="1.1.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013167169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016901 - oxidoreductase activity, acting
                     on the CH-OH group of donors, quinone or similar compound
                     as acceptor [Evidence IEA];
                     GO_function: GO:0070968 - pyrroloquinoline quinone binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HEX2725635.1"
                     /translation="MTRSLAPFACAIVALIAPATAQQQPQRIKTDKAEVVVETVADGL
                     SHPWGLAFLPDGRMLVTERPGRLRIVSANGQVSAPIAGLPAVHARGQGGLLDVALDPD
                     FAANRFVYVSFAEDRANGNGTSVARGRLDEAGARLEAVQVIFRQEPSYSNSHHFGSRL
                     VFDRTGGLFVTLGERFELRDQAQNPANHIGKIVRIRPDGGVPDDNPFIGQAGRRAEIW
                     SLGHRNVQGAALNPQTGELWAAEHGARGGDEINIVRKGRNYGWPVISYGVHYTGQKIG
                     EGTSKSGMEQPVYYWDPSIAPSGMAFYTGDKFPGWRGNVLVGALAGQLVARLETSGDR
                     VTGEERMLRQIGERIRDIRQGPDGYVYLLTDSDRGRILRIKPADGKS"
BASE COUNT          248 a          581 c          552 g          237 t
ORIGIN      
        1 cctgatcggc ctcgagctgt cgatctcggt gctgagcgcg gccctgcgcg gcgagccgac
       61 gggcgccacg cgacaatggc gcggggacgt cgcttcggtc gccaagcgcc cgctgcgcgc
      121 cggcgagatg ctcgacggcg agggcggcta taccgtctac ggcaagctga tgccggcggc
      181 ggcgagccgg gccgagggcg tcttgccgat cggcctcgcc catcgcgtca agctcaagcg
      241 cgacatcgct gccggcggcc tcgtgcgcat gagcgacgtg gagctcgacg agacctcgct
      301 ggcggtgcgc acgcgccgcg atctcgagcg cctcaacgac atgtgaccgg ccgtcggccg
      361 cgcgtccgtt gatctctccg cgacgcgccc cacctgattt ccgcgccacg tctccgagag
      421 ggttttgatg accaggtcgc ttgccccgtt cgcttgcgcc atcgtggcct tgatcgcgcc
      481 cgccaccgcg cagcagcagc cgcagcgcat caagaccgac aaggccgagg tcgtggtcga
      541 gaccgtcgcc gacggcttga gtcatccctg gggtctcgcc ttcctgccgg acgggcgcat
      601 gctcgtgacg gagcgtccag ggcgtctccg catcgtctcc gcgaacgggc aggtgtcggc
      661 gccgatcgcc ggcctgccgg ccgttcacgc gcgcggccag ggcggcctgc tcgacgtggc
      721 gctcgatccg gattttgccg ccaaccgttt cgtctacgtg agctttgccg aggaccgtgc
      781 caacggcaac ggcaccagcg tcgcgcgtgg caggctcgac gaggcgggcg cgcgcctcga
      841 ggccgtgcag gtcatcttcc ggcaggagcc gtcctactcc aacagccatc atttcggctc
      901 gcggctcgtc ttcgaccgca ccggcgggct gttcgtgacc cttggcgagc gtttcgagct
      961 gcgcgaccag gcgcagaacc cggccaacca catcggcaag atcgtgcgca tcaggccgga
     1021 cggcggcgtg cccgacgaca accccttcat tggccaagcc ggcaggcgtg cggagatctg
     1081 gtcgctcggc catcgcaacg tgcagggcgc cgcgctcaat ccgcaaaccg gcgagctgtg
     1141 ggccgccgag cacggcgccc gcggcggcga cgagatcaac atcgtgcgca agggccgcaa
     1201 ctacggctgg ccggtgatca gctacggcgt gcactacacc ggccagaaga tcggcgaggg
     1261 cacatccaag agcggcatgg agcagccggt ctattattgg gacccctcga tcgcgccgtc
     1321 gggaatggcc ttctacacgg gcgacaagtt cccgggctgg cgcggcaacg tgctggtcgg
     1381 cgcgctggcc ggccagctcg tggcgcggct cgagaccagc ggcgaccgcg tcaccggcga
     1441 ggagcgcatg ctgcgccaga tcggcgagcg catccgcgac atccgccagg ggcccgacgg
     1501 ctacgtctat ctcctcaccg attccgaccg cggccgcatc ctgcgcatca aacccgccga
     1561 cggtaaaagc tgaagcgcac caaccctcgc cattccgggg cgatccgaag gatcgaac
//
LOCUS       DATAIQ010000448         1915 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_241812, whole genome shotgun sequence.
ACCESSION   DATAIQ010000448 DATAIQ010000000
VERSION     DATAIQ010000448.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1915)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1915)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1915
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_241812"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..495)
                     /locus_tag="VHN20_07435"
     CDS             complement(<1..495)
                     /locus_tag="VHN20_07435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725636.1"
                     /translation="MGAATLEPVVVAAMLASASLHACWNAWVKSSAAPHEALAAVVIA
                     CGVPQGVLLLIYGFPPLPAWPWIGVTVVLGTGALLLLGSAYREGDFAVAYPLIRGLIP
                     LVLAVAAIPLFAEHPPVNGAAGIVGVSAGLVLIAWESARRTRTMTLKGLAFAALAAAV
                     TAASV"
     gene            complement(677..907)
                     /locus_tag="VHN20_07440"
     CDS             complement(677..907)
                     /locus_tag="VHN20_07440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725637.1"
                     /translation="MHRDVATPNPRGRFRGRATTLYAAVPPLPLTSRTEWYIHGWNRA
                     QAQHLQWLQFQQQTQFELNQLRGAVHRHYLFH"
     gene            1294..1899
                     /locus_tag="VHN20_07445"
     CDS             1294..1899
                     /locus_tag="VHN20_07445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725638.1"
                     /translation="MKRGDILKLTALTRVQFDTRARRGHLPSVSPDDAEGENDSELPR
                     SDYRARDALATIVMDDLVRSGWGQQDLSGAARLVAKGMETLGPQNVARLATSNPRDEL
                     WLGAALIRYPGDEIVRLEAAASLPMATDHDRNELRDILLGHEAPIIGTLAEIVFDALG
                     YEGLSATRLIAVNLSAAYRLLQARAAQHGIDLPSDLAEYAS"
BASE COUNT          332 a          633 c          677 g          273 t
ORIGIN      
        1 gacggaggcc gcagtgacgg cggcggcgag cgccgcgaaa gcgaggcctt tgagcgtcat
       61 ggtgcgggtc cggcgcgccg actcccaggc gatcagcacg agcccggcgg agacgccgac
      121 gatgccggcg gcgccgttga cgggcgggtg ctcggcaaat agcgggatgg ccgcgaccgc
      181 gaggacaagc gggatcaggc cgcggatcag cggataggcg accgcgaagt ctccctcgcg
      241 gtaggccgat ccgagcagca gcagggcgcc ggtgccgagc accacggtca cgccgatcca
      301 cggccaggcc ggcagcggcg gaaagccgta aatcagcaaa aggacgcctt gcggcacgcc
      361 gcacgcgatc acgacggcgg ccagcgcctc gtgcggcgca gcgctcgact tcacccaggc
      421 gttccagcag gcgtgcaggg acgcgctggc gagcatggca gcgacgacga cgggctccaa
      481 ggttgctgcc cccatccggc gtcaccaggc ggctaaacgc cagatcggcg caacgctctc
      541 gtgccgcaaa agatgtcgcg cgccaaggac aaacgggcaa ctggacgcgc cgccaggtgg
      601 ctagagcggt ggatcgctcc agatggttcg atcccgctcc ggcgaagtgg tcgcgatttc
      661 gccgatcgtg cctggtctaa tgaaacaggt aatgccggtg caccgccccg cggagctggt
      721 tcagctcgaa ttgcgtctgc tgctggaact gcagccactg caggtgctgt gcctgcgcgc
      781 ggttccagcc gtggatgtac cattcggtcc ggctcgtgag cggcaacggc ggaaccgcag
      841 cgtagagggt ggtggcgcga cctctgaacc ggccgcgcgg attcggggtg gcaacgtcgc
      901 gatgcatacg tcgggagcga agctcgcccg tcgacccgca gccacggcac acctggccga
      961 gaacggcgcg gctgcgcatc tcggcccgga tggcgcgctc cgactcggcg ccgctcggcc
     1021 gggtgcctcg tcgttgcgcg gcatccgcgc tagccgcggc taagagcgca acgagcaagg
     1081 cagcgagagc gatggtgcgc atgcatgtcc ctgggaagac aacgctcgag ccgcgggcct
     1141 cgttcgccgc gcggcatggg ccggcgctga ccgcctgctc agccggtcgc cagatgccgg
     1201 accgccgcgg tgaacggacg catggcagcg ctagggccaa cttgtccaca acgcctcctt
     1261 gcatgcagtc agattgcatg caacaggcgt gtgatgaagc gcggcgacat cctgaaactg
     1321 accgccctca cgcgggtcca gttcgacacc cgggcgcgac gaggtcacct tccgtcggtg
     1381 tcaccggatg atgctgaagg cgagaacgac tccgagttgc cgcgcagcga ttatcgagca
     1441 agggatgcgc tcgccacgat cgtcatggac gacctcgtcc gctccggttg gggtcagcag
     1501 gatctgtccg gtgcagcgcg ccttgtcgca aaggggatgg agactctcgg gccgcagaac
     1561 gtggcccgct tggcgacaag caacccgcgc gacgagctct ggttgggggc ggcgctgatc
     1621 cgttaccccg gcgacgagat cgtcaggctg gaagccgccg cgagcctgcc catggcgacg
     1681 gatcatgatc gcaacgagct cagggatatc ctgttgggac acgaggcgcc gatcatcggg
     1741 accttggccg agatcgtttt cgacgcgctc ggctacgagg gcctgtccgc gacgcgcctg
     1801 atcgccgtga accttagtgc cgcataccgc ctgctacagg cgcgcgccgc ccagcacggc
     1861 atcgacctgc cttccgatct ggctgaatac gcttcctgag gagcgtggcc ctcgg
//
LOCUS       DATAIQ010000449         2893 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_23898, whole genome shotgun sequence.
ACCESSION   DATAIQ010000449 DATAIQ010000000
VERSION     DATAIQ010000449.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2893)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2893)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2893
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_23898"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(243..437)
                     /locus_tag="VHN20_07450"
     CDS             complement(243..437)
                     /locus_tag="VHN20_07450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2065 domain-containing protein"
                     /protein_id="HEX2725639.1"
                     /translation="MSDLVVALGLALALEGLLFAAFPEAVKRAMVEASQTPSERMRAV
                     GIGSAVLGVVIVWFVRGVGS"
     gene            complement(450..1463)
                     /locus_tag="VHN20_07455"
     CDS             complement(450..1463)
                     /locus_tag="VHN20_07455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012331033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease modulator HflC"
                     /protein_id="HEX2725640.1"
                     /translation="MRSQVLRTSLLVLGGLLIVALFAATFTVHQTQQALVLQFGAVRK
                     VITEPGLYFKIPLAESVHYVDKRVLDLDTPVQTVLSSDRQNLEVDAFARYRITDPLRF
                     YQASVGGSVQIANGRLTSLLNAALRNVLAGASTNDIIRTRRAELMNLIQDSVNRWAQE
                     QAFGVEIIDVRLTRVDLPAANSQAVFQRMQTERQREAADLRATGQQQAVTIRARADRE
                     ATVVVAEGTRKAEELRGQGDADKNRILAEAFGRDPDFFAFYRSMQAYEAGLKPGETRM
                     VLSPTSDFFRYFNDPSGRGKGAAGNDGAGAPAPSRPNAAVPGASSAIGGARTGPGTTG
                     AAP"
     gene            complement(1460..2611)
                     /gene="hflK"
                     /locus_tag="VHN20_07460"
     CDS             complement(1460..2611)
                     /gene="hflK"
                     /locus_tag="VHN20_07460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012331034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0045861 - negative regulation of
                     proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsH protease activity modulator HflK"
                     /protein_id="HEX2725641.1"
                     /translation="MPWSNQSGGGGGPWGQRGGSGGPWGSGPSGGGSSGPPDLEEILR
                     RGQDRIRDFIPGGGGMGAKGAIIIGLLAIAGWLATGLYRVQPNEVGLNLIFGRYTGQT
                     SQGLRYNFPYPIGSVQKVDVTGVNRTEVGYRPGGPQGRPRDMPEESLMLTGDGNIVDI
                     DFDALWRVDAARAASYQFNLQNPQGTIKAVAESAMREVIGRRQIQAVLTTEQASVASE
                     VQQIMQQTLDAYGAGVQVTGVQLQSAVPPPQVREAFYDVNAAQQDAVRVQNEAGAYAS
                     RVVPEAHGKAARVVQEAEAYREQSVAEASGQASRFTQVYDSYRRAPDVIRQRMFLETM
                     ERILAGTDKIVIDQNNQGGPGVVPFLPLNEPSRRTQPQQGAGQAQGSSR"
BASE COUNT          459 a          987 c          951 g          496 t
ORIGIN      
        1 tcggcgagat cggcgaacga gtccgggccc cgtgccgagg cgtcgaccgg caatgcggtg
       61 gcgaacagag ccaccgctcc gaagaacgtc gcggcaaaac gacgacgcgc gggcgcctgc
      121 gacggcgcca gacttgttac ggctcgaggc atgatgttcc tcattgatgt gacgcgccgt
      181 cggtggcgca atacgttgcg ctgatacatg cacgaattgc ggcggaagcg cggcctttcg
      241 ccttacgatc cgacgccacg cacaaaccac acgatcacaa cgccgagcac cgccgacccg
      301 atcccgaccg cgcgcatgcg ctcgctcggc gtctgcgacg cctcgaccat ggcccgtttc
      361 acggcctcgg gaaaggcggc gaacaacagc ccttccaggg caagggccaa gcccagtgcg
      421 acgaccagat cggacacgcg cgacgcccgc tacggcgccg cgccagtcgt tccaggacct
      481 gtccgagctc cgccgatcgc cgaactcgcg cccgggaccg ccgcattcgg gcgggacgga
      541 gcgggggcgc cggcgccgtc gtttcctgcc gcgcctttgc cgcggccgga cggatcgttg
      601 aagtagcgga agaaatccga agtcgggctc agcaccatgc gcgtttcgcc cggcttgagc
      661 ccggcctcgt aggcctgcat ggaccggtag aaggcgaaga agtcgggatc gcggccgaac
      721 gcctccgcga ggatgcggtt cttgtcggcg tcgccttgcc cgcgcagctc ctccgccttg
      781 cgggtcccct cggcgacgac cactgtcgcc tcgcggtccg cccgcgcgcg aatagtgacg
      841 gcctgctgct ggccggtcgc gcgaagatcg gcggcttcgc gctgacgttc tgtctgcatg
      901 cgctggaaca ccgcctggct gttggcggca ggcagatcga cgcgcgtcaa ccgcacgtcg
      961 atgatctcca ccccgaacgc ctgctcctgc gcccatcggt tcacgctgtc ctggatcagg
     1021 ttcatcagct cggcacgccg tgtgcggatg atgtcgttcg tcgaggctcc cgcgagcacg
     1081 ttgcggagcg ccgcattgag caggctcgtc agacgcccgt tggcgatctg cacgctcccg
     1141 ccgaccgagg cttgatagaa gcgcagcgga tcggtgatcc ggtagcgtgc gaaggcatcg
     1201 acctcgaggt tctggcgatc gctcgagagg accgtctgca ccggcgtgtc gagatcgagc
     1261 acgcgcttgt cgacgtagtg gacgctctcg gccaggggga tcttgaaata aaggccgggc
     1321 tccgtgatca ccttgcgcac cgcaccgaat tgcagcacga gcgcctgttg cgtctggtgc
     1381 acggtgaagg ttgcggcgaa cagcgcgacg atgaggaggc caccgagaac aagaaggcta
     1441 gtgcgaagaa cctggcttct catcggctgc tgccctgcgc ttggccggcg ccctgctgcg
     1501 gctgcgtgcg gcgcgacggt tcattgagag gcaggaacgg cacgacgccc ggtccgccct
     1561 ggttgttctg atcgatcacg atcttgtccg tgccggccaa gatgcgctcc atggtctcga
     1621 ggaacatgcg ctgccggatc acgtcgggcg cccggcggta cgagtcgtag acctgcgtga
     1681 accggctcgc ctggccgctg gcctcggcaa cggactgctc ccggtaggct tcggcttcct
     1741 ggacgacgcg ggccgccttg ccgtgcgctt ccggaaccac ccggctggcg taggcgccgg
     1801 cctcgttctg cacgcgcacc gcatcctgct gggcggcgtt gacgtcatag aaggcttcgc
     1861 gcacttgcgg cggcggcacc gccgactgca actgcacgcc ggttacttgg accccagcgc
     1921 cgtatgcatc aagcgtctgt tgcatgatct gctgtacttc gctcgcgacg ctcgcctgct
     1981 cggtcgtgag aacggcctga atctggcggc gcccgatcac ctcgcgcatg gcgctctccg
     2041 caaccgcttt gatcgtcccc tgcgggttct ggagattgaa ctggtagctg gcagcgcggg
     2101 cagcgtcgac ccgccagagc gcgtcgaaat cgatgtcgac gatgttgccg tcgccggtca
     2161 gcatcaggct ttcctcgggc atgtcgcgcg ggcgtccctg cggcccacct ggccgataac
     2221 cgacttccgt gcggttgacc ccggtcacgt ccaccttttg caccgaaccg atcggataag
     2281 gaaaattgta tcgcaagccc tggctcgttt gaccggtata gcggccgaag atcaggttga
     2341 ggccgacctc gttgggctgc actctgtaga ggccggtggc gagccagccg gcaatcgcga
     2401 gcaggccgat gatgatcgcg cccttggcgc ccatgccgcc gccgccgggg atgaaatccc
     2461 ggatccggtc ctgaccacga cggaggatct cctccagatc gggcggaccg ctgctgccgc
     2521 cgcccgacgg tcccgagccc cacgggccac ctgacccgcc gcgctggccc cagggcccac
     2581 cgccgccgcc actctgattg ctccaaggca tcgtacgcct gtcctgttcc ccaaaatgtc
     2641 cggctggaag tgtccggctg tgctgctcag acccgaggcg gtttgtcggt tagctctcgg
     2701 tgacctgtca aggcgagcag atggttatca taactgcggt gtcaacgcag tgcggcagcg
     2761 ggccgccgcc gctcaaggtc tataaaggta aacgcgtgct cgtcctcggg gcccttgcga
     2821 ccgggtttcc gcaccatttc ccggaactcg gcccggtcat aagccggaaa gacggtgtcg
     2881 cccgccggct cgg
//
LOCUS       DATAIQ010000450         1520 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_116639, whole genome shotgun sequence.
ACCESSION   DATAIQ010000450 DATAIQ010000000
VERSION     DATAIQ010000450.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1520)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1520)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1520
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_116639"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..347)
                     /locus_tag="VHN20_07465"
     CDS             complement(<1..347)
                     /locus_tag="VHN20_07465"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HEX2725642.1"
                     /translation="MSRTVVHVSDIHFGRVDPAVLDPLVKAVRKQKPDVVAVSGDLTQ
                     RARIEEFEQARAFLDRLPRPQIVVPGNHDVPLYNVYDRFVNRFDRFYRLITDEVEPVH
                     QDKEIIVAGINTAR"
     gene            complement(344..1231)
                     /locus_tag="VHN20_07470"
     CDS             complement(344..1231)
                     /locus_tag="VHN20_07470"
                     /inference="COORDINATES: protein motif:HMM:NF039905.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase family protein"
                     /protein_id="HEX2725643.1"
                     /translation="MPRPDTAAVIVNMHSGSTRRALLHRLPELFRNNGIRAEMVIAPS
                     GSHVRRFAQAAARRHPLVVAAGGDGTISAVAAQVIASDSILGVLPLGTYNHFARDLNI
                     PLVVEDAVRVLAEGTPRRVDVGEVNGHTFINNSSLGLYPRLVEEREQHRRLGYRRWVA
                     LTAALLSTFRRFGFVHVRVTAGELEYEGDTPFVFVGNNLYTLSGLRLGSRETLAGGHL
                     CVCLARRVSRWQLLRMALRAWLGSMPKGPELDLLCTDEVRVEPRSRRTRVSLDGEIVR
                     ITGPLHYRVLPGALQVVAP"
     gene            complement(1218..>1520)
                     /locus_tag="VHN20_07475"
     CDS             complement(1218..>1520)
                     /locus_tag="VHN20_07475"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: protein motif:HMM:NF014296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004489 - methylenetetrahydrofolate
                     reductase (NAD(P)H) activity [Evidence IEA];
                     GO_process: GO:0006555 - methionine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase"
                     /protein_id="HEX2725644.1"
                     /translation="TVPIVPGIMPITSAAQVEKMTMICGASIPFRLAAELDRRRNDPE
                     AVAQLGIAHATAQSLDLLQNGAPGIHFYTLNRSTATRQVLAALRTVGIGGARSAAT"
BASE COUNT          273 a          451 c          555 g          241 t
ORIGIN      
        1 cgtgccgtat tgatgccggc gacgatgatc tctttatcct ggtgcaccgg ctcgacctcg
       61 tcggtgatca ggcggtagaa gcggtcgaag cgattcacga accggtcata gacgttgtag
      121 agcgggacgt cgtgattgcc cggaactacg atttgcggcc ggggaaggcg gtcgaggaag
      181 gcgcgggctt gctcgaactc ctcgatgcgg gcgcgctggg tgaggtctcc ggagacggcg
      241 accacatccg gcttctgttt gcgcacggct ttgacaaggg ggtcgagcac ggccggatcg
      301 acccgtccga aatggatgtc ggacacgtgg acgacggtgc ggctcacggc gccaccactt
      361 gaagggcccc gggcagaacg cggtagtgca gaggcccggt gatacggacg atttcgccgt
      421 cgagcgagac gcgggtgcgg cgcgagcggg gttcgacgcg gacttcatcg gtgcagagca
      481 ggtccagttc gggtcccttg ggcatagagc cgagccacgc cctcagggcc atgcgcagga
      541 gttgccagcg gctcacgcgg cgcgcgaggc agacgcacaa atggccgccg gccagcgtct
      601 cgcgcgagcc gagccgcaac ccggacagag tgtagaggtt gttgccgacg aatacgaacg
      661 gcgtgtcgcc ctcatactcg agttcaccgg cggtgacacg gacgtgaacg aagccgaagc
      721 gccggaaggt ggacagcagc gccgccgtca gcgctaccca gcggcggtag ccgaggcgcc
      781 ggtgctgctc ccgttcttct accagccgcg gataaagccc gagactcgag ttgttgatga
      841 aagtgtggcc gttgacctcg ccgacatcga cgcggcgcgg ggtgccttcg gctagaacgc
      901 gcaccgcatc ttctacaacg agcgggatgt tcagatcgcg tgcgaagtgg ttataggtcc
      961 cgaggggcag cacgccgagg atcgaatctg acgcaatcac ctgcgccgcg acggcgctga
     1021 tggtgccatc tccgcccgca gcgacgacaa gaggatggcg ccgcgcagcg gcctgagcga
     1081 agcgccggac gtgggagccg gagggcgcaa tcaccatctc ggcgcggatg ccgttgttgc
     1141 gaaacaactc cgggagccgg tgcagcagtg cgcggcgcgt ggaacccgag tgcatgttga
     1201 cgatgactgc cgcggtatca ggtcgcggca ctgcgagcgc cgccgatgcc gacggtcctg
     1261 agcgcggcca gaacctgccg tgtcgctgtg ctgcggttca gcgtgtagaa gtgaatgccc
     1321 ggagcgccat tctgcagcag atcgagggac tgggccgtcg cgtgggcaat gccgagttgg
     1381 gcgacggctt cgggatcgtt gcgccgccgg tcgagctcgg cggcgagacg gaacggaatc
     1441 gacgcgccgc agatcattgt catcttctcg acctgtgcgg cggacgtgat gggcataatg
     1501 ccggggacga tcggcacggt
//
LOCUS       DATAIQ010000451         3952 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_333686, whole genome shotgun sequence.
ACCESSION   DATAIQ010000451 DATAIQ010000000
VERSION     DATAIQ010000451.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3952)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3952)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3952
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_333686"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(40..543)
                     /locus_tag="VHN20_07480"
     CDS             complement(40..543)
                     /locus_tag="VHN20_07480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018316832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX2725645.1"
                     /translation="MRRRAPAVGPGVRIGHVHLKVADLDRALGFYCHVLGFELMQRYG
                     SGAAFISAGGYHHHIGLNTWESLGGAPPPPGSTGLFHTAILYPSRAELADALRRVRAA
                     GIPLDGASDHGVSEALYLRDPDENGVELYWDRPQELWPRTRDGMLAMFTRRLDLDDLL
                     RESPPVG"
     gene            complement(582..1172)
                     /locus_tag="VHN20_07485"
     CDS             complement(582..1172)
                     /locus_tag="VHN20_07485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015927009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0022904 - respiratory electron transport
                     chain [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b"
                     /protein_id="HEX2725646.1"
                     /translation="MSDAPSSYLPVQKSLHWLIAAIILLVMVPVGLTMTRLGEGPTTN
                     TLYELHKSFGIIVFGLAVIRTAIRLSRGAPPLEPDIPAWQRRAAHASHYTMYVLIFLV
                     PLTGWAATSACCPPVNLFWTVPLTLPVPANEDLAKRIFLFHYTFVFTLAAVVMVHAGA
                     ALHHHFVRRDRTLLRMLPGTGQSLQAASLRTRLDQR"
     gene            1449..2564
                     /gene="ribA"
                     /locus_tag="VHN20_07490"
     CDS             1449..2564
                     /gene="ribA"
                     /locus_tag="VHN20_07490"
                     /EC_number="3.5.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase II RibA"
                     /protein_id="HEX2725647.1"
                     /translation="MRLVLSFSGGLDQMSVERAIAEFRTARPVLIEDGETCALVIGVE
                     DLDSARVAQLDAIAGGQARLVLPAARLRRLGLDRTQAGVIALPSIEMGRIETLALKSD
                     ARTDAPVRCAAALDHDAVELARQALVLPAVIVVPICKTIEIDPSILRVTSAALRTYRQ
                     ANARELKIVSRAPVPLEGAPETEFVVFRGGEGLRDQVAIIVGKPDLAKPVPVRLHSAC
                     LTGDLFGSLKCDCGDQLRGTVHWMAQNGGGVLLYLDQEGRGNGIANKIRAYKLQSQGY
                     DTYDADEVLGFELDQRRFDFAAEMLRQLDVPHVRLITNNPEKIAALRKAGLEVVSDQR
                     ALGRPTAENVRYLASKRDRAGHFIDFDTLAALAPNQD"
     gene            2602..>3952
                     /locus_tag="VHN20_07495"
     CDS             2602..>3952
                     /locus_tag="VHN20_07495"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018406042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HEX2725648.1"
                     /translation="MKSPRLFGDPAAPSTPKERWPLVQTLALFAAAWLVLSWPWLSGA
                     VTIPWDAKAHFYPQLQFLAQSLHRGELPFWAPYVFSGAPQIADPQSLIFSPPFLALAW
                     LDPNPSFRTADATVLAMLGLGGMAIVALFRDRGWHPAGAIVAALAFAFGAAAAWRIQH
                     VGQILSLAWLPIALWLLTRALERRSPGYGLAAGVVAGLMVLGRDQVAYLGVWTLIGAV
                     VAHWLDNAAGWRAIRASAVPLACGAIGGALVVTVPVLLTLVLTEGSNRAAIDYVGAGQ
                     GSLHPALLLTAFAANLFGADGPLQNHWGPPSPLWGPVDLFLARNMGQAYIGALPIVLI
                     MTAALQRGALWAREIRFFTVLAALMLLYALGRYTPFFRATFEIVPGVDLFRRPADAVF
                     LLGFAAAVLSGYLVHRWCAGGVVPATPARRAVAAILILVPMALCVAVPIAKDTFPLAH
                     "
BASE COUNT          609 a         1277 c         1343 g          723 t
ORIGIN      
        1 ccgtcgaatg aggcgcggag gattggtccg gcgactgcct cagccgaccg gcggcgactc
       61 gcgcaacaga tcgtctaggt cgagccggcg cgtgaacatg gcaagcatgc cgtcgcgtgt
      121 ccgcggccac agctcctgcg gacggtccca atacagctcg acgccgttct cgtccggatc
      181 gcgcaggtag agcgcttcgc tcacaccgtg atcgcttgcg ccgtccagcg ggatgcctgc
      241 cgcgcgcacc cgacgcagcg cgtcggcgag ctcggcgcga ctcggataca ggatggcggt
      301 gtggaacaag ccggtcgatc cggggggcgg cggcgcgccg ccgaggcttt cccaggtgtt
      361 gagcccaata tgatggtggt agccaccggc cgagatgaaa gcagcaccgc tgccataacg
      421 ctgcatgagc tcgaagccaa gcacgtggca atagaagccg agagcgcgat cgagatcggc
      481 gaccttgaga tggacatggc cgatgcgcac gccgggcccg acggccggtg cacggcgtct
      541 cacgttgatc ggatcgtgca aggggtggag tgtatccgag ctcatctttg gtccagcctc
      601 gtgcggagtg aagccgcctg caagctttgc cctgttcccg gcagcatgcg cagcaacgtg
      661 cggtcacgcc ggacgaaatg gtggtgcagc gccgcgccgg cgtgaaccat cacgaccgcc
      721 gcgagcgtga acacgaacgt gtagtggaac agaaagatcc gtttggcgag atcctcgttc
      781 gcgggcactg gcagcgtcag cggcacggtc cagaacaggt tgacgggcgg gcagcaggcc
      841 gacgtcgcgg cccatcccgt gaggggcacg agaaagatca ggacgtacat cgtgtaatgc
      901 gacgcgtgcg cggcgcggcg ctgccaggcc gggatgtcgg gctcaagcgg cggcgcgcct
      961 cgcgacaggc ggatggccgt gcgaatgacg gcaagaccga aaacaatgat gccgaacgac
     1021 ttgtgcaact cgtaaagcgt gttcgtcgtg gggccttcac cgagacgggt catcgtcagg
     1081 cccactggga ccatgaccag aaggatgatg gcggcaatca gccagtgcag cgatttctga
     1141 accggcaaat acgatgaggg tgcgtcactc atgcctgacc tcccgaggct aggggcgctt
     1201 gccgaaatcg gcttggatta taaggaatta aagcccatac gggccgtatt ccaccaagcc
     1261 cgcatccaat ccctcggccg cggtgtatct gcgaccatga agtttgctct ttgcgcttgc
     1321 gagggtgatg ctatgttgac cacgttcatc tcccatccag ctctggctgg ttatcaacag
     1381 catggccgtg cactatatca gggccgagct ggcgatcggc tttgggctct aaggtcttcc
     1441 gagcgatgat gcgtctcgta ttaagctttt caggcggcct cgaccagatg tcggtcgagc
     1501 gtgcgattgc ggagtttcgc accgcccgcc cggtcctcat cgaggacggc gagacgtgcg
     1561 cgctcgtcat cggtgtcgag gatctcgaca gcgcccgcgt ggcgcagctc gacgcgattg
     1621 cggggggcca ggcgcgcctc gtgctccccg cggcgcgcct gcggcgcctg ggactcgacc
     1681 gcacccaggc cggggtcatc gcgctgccct cgattgagat gggccgtatc gagaccctgg
     1741 cgttgaagag cgatgcccgc accgacgcgc cggtgcgctg cgccgcagct ctcgatcacg
     1801 atgcggtcga gcttgcgcgt caggcattgg tcctgcccgc cgtgatcgtc gtaccgattt
     1861 gcaagacgat cgagatcgat ccttcgatct tgcgcgtcac gagcgcggcg ttgcgcacat
     1921 accggcaggc gaatgcgcgc gagctgaaga tcgtgtcgcg cgcgccggtg ccgctcgaag
     1981 gcgcgccgga gaccgagttc gtggtgttcc gcgggggcga gggattgcgc gaccaggtcg
     2041 cgatcatcgt cggcaagccg gacctcgcca agcccgtgcc ggtccgactg cattcggcgt
     2101 gcctcaccgg cgatctgttc ggcagcctga aatgcgactg cggcgatcag ctgcgcggaa
     2161 ccgtgcattg gatggcgcag aacggcggcg gcgtcctgct ctatctcgat caggaaggcc
     2221 gcggcaacgg catcgccaac aagatccgcg cctacaagct gcagagccag ggctacgaca
     2281 cctacgatgc cgacgaggtg ttggggttcg agctcgacca gcgccgcttc gatttcgcgg
     2341 ccgagatgct gcgacagctc gatgtgccgc acgtgcggct gatcaccaac aatccggaga
     2401 agattgcggc tttgcgcaag gccggcctcg aagtggtgtc ggatcaacgc gcccttggcc
     2461 ggccgaccgc cgagaacgtt cgctacctcg cctcgaagcg cgaccgggcc gggcatttca
     2521 ttgatttcga tacccttgcg gccttggccc cgaaccagga ttgacggcac gttgtgacga
     2581 cgtgagcgcg gaccgctttc cgtgaagtcg ccgcgcttgt tcggcgaccc ggccgcacca
     2641 tcgaccccga aagagcgctg gccgctcgtg cagacgctgg cgttgtttgc ggcggcttgg
     2701 ctcgtcctca gctggccgtg gctctcgggc gcggtgacga tcccgtggga cgccaaggcg
     2761 catttctatc cgcaactgca gttcctggca cagtccctgc atcgcggcga gctgccgttc
     2821 tgggcgccgt atgtattttc cggcgccccg cagatcgccg atccgcaatc actgattttc
     2881 tcgccgccgt tcctcgcgct ggcatggctc gacccgaacc cgagcttccg gacggcggac
     2941 gcgaccgtgc tcgccatgct cggccttggc ggcatggcga ttgtcgcgct gtttcgcgac
     3001 cgcggctggc atccggccgg tgcaatcgta gcggcgctcg ccttcgcgtt cggcgccgct
     3061 gcagcctggc gcatccagca tgtcggccag atcctgagcc tcgcctggct gccgatcgcg
     3121 ctgtggctgc tgacgcgcgc tctggagcgg cgctcgcccg gctacgggct cgccgccggc
     3181 gtggtcgccg ggctgatggt cctcggccgc gaccaggtcg cgtatctcgg cgtctggacg
     3241 ctgatcggag ccgtggtggc gcattggctc gacaacgccg ccggttggcg agccatccgc
     3301 gccagcgctg tgccgttggc ctgcggcgcg atcggtggcg ccctggtggt gacggtcccg
     3361 gtgctgctga cgctggttct gaccgagggc tcgaacaggg ccgccattga ctatgtgggc
     3421 gcggggcagg gctctctgca tccggctctt cttctgacgg catttgcggc gaacctgttc
     3481 ggcgctgatg gcccgttgca gaatcattgg ggcccgccaa gcccgctctg ggggcccgtc
     3541 gatctttttc tcgcccgcaa tatgggccag gcgtatatcg gcgcgttgcc gatcgtgctg
     3601 atcatgaccg cggccctgca gcgcggggcg ttgtgggcgc gcgagatacg attctttacc
     3661 gtgctggcgg cgctcatgct gctctatgcg ctgggacgat acacgccgtt tttccgcgcc
     3721 acgttcgaga tcgtgcctgg ggtcgatctt ttccgccgac cggccgatgc ggtcttcctg
     3781 ctcggcttcg ctgcagcggt tctatctggc tatctggtcc atcgctggtg cgcgggcggg
     3841 gtggtgcccg ccacccccgc gcggcgggcc gtcgcggcga tcctgatcct cgtccccatg
     3901 gcgctgtgcg tcgccgtgcc gatcgcgaaa gacacgtttc ccctcgcgca cg
//
LOCUS       DATAIQ010000452         2602 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_301255, whole genome shotgun sequence.
ACCESSION   DATAIQ010000452 DATAIQ010000000
VERSION     DATAIQ010000452.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2602)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2602)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2602
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_301255"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..448
                     /locus_tag="VHN20_07500"
     CDS             <1..448
                     /locus_tag="VHN20_07500"
                     /inference="COORDINATES: protein motif:HMM:NF017263.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA];
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="alginate lyase family protein"
                     /protein_id="HEX2725649.1"
                     /translation="AMAAGIAADRADLFDAGARSFEVGVAQIQPDGTLPLELARRSRA
                     LHYHLFACAPLVILAELAAANGRNFYGARDGAVARLAERALSGLADPSFFAQRTGVSQ
                     EPVGMSGHTVAWITPFVARFPERSMLAPVRRGAMPKGLYIGGLPPM"
     gene            complement(470..661)
                     /locus_tag="VHN20_07505"
     CDS             complement(470..661)
                     /locus_tag="VHN20_07505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725650.1"
                     /translation="MANALEVWAASRERAARDLAKQAANLADQGCNHDAAHLRSAARS
                     LTVKAVHERARAAALRSAA"
     gene            1332..>2602
                     /locus_tag="VHN20_07510"
     CDS             1332..>2602
                     /locus_tag="VHN20_07510"
                     /inference="COORDINATES: protein motif:HMM:NF014795.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HEX2725651.1"
                     /translation="MASQSHAPMAQIDRPQNLGNPQLGWGSDAIAQLISRLDLKYVSL
                     VPGASFRGLHDSLVNYLGNSNPQMVICLHEEHAVAIAHGYAKVTDEPMAVCLHTNVGL
                     MHATMAIFNAWCDRRPVVMFGANGPVDAAQRRPWIEWIHTAQDQGALIRHYTKWDDQP
                     ASVPAAFESILRANQIARTPPYGPVYVCLDAGLQESKLAGEPAMPDIGRYAPMPPQGA
                     DADLIAKAADWLLAARKPVILLGRVSRSQEDWDRRVAFAEALGATVLTSLHDASAFPT
                     DHPLHPIGPRFRPTADTNAILKEADVILSLDWLDLGGFLKVTFGSHDIPAKIINCTVD
                     PYIHNGWSMDYQMLPPADLTVLAPPDVAVKALLKAVEGRGKKPAAKYAERRTTRLPLK
                     TSANGAKGPMGLVDFAACLRDTFAGQPVSYI"
BASE COUNT          414 a          938 c          845 g          405 t
ORIGIN      
        1 ggcgatggcc gcgggcatcg ccgccgaccg tgctgatctg ttcgacgccg gtgcgcgcag
       61 cttcgaggtc ggcgtcgcgc agatccagcc tgacggaacc ctgccgctcg agctcgcgcg
      121 ccggtcacgg gcgctgcact atcacctgtt cgcctgcgcg ccgctcgtca tcctcgccga
      181 gctggcggcc gcgaacggac ggaactttta cggcgcgcgc gacggtgcgg ttgcccgcct
      241 cgccgagcgc gccttgtccg gcctggccga cccgtcgttc tttgcgcagc ggaccggcgt
      301 gtcgcaggag cctgtcggca tgtcgggaca tacggtcgcg tggatcacgc cgtttgtggc
      361 ccgctttccc gagcgatcga tgctggcgcc ggtcaggcgc ggcgccatgc ccaaaggtct
      421 ctacatcggc ggcttgccgc cgatgtaggc ttggcatcga agcgaggatc taggccgcgg
      481 accgcagcgc ggcggcgcgg gcgcgctcgt ggaccgcctt gacggtgagg gatcgtgcgg
      541 cggaccggag gtgggccgca tcgtggttac agccctggtc ggcaaggttg gcggcctgct
      601 tggccagatc cctggccgcc cgctcgcgtg acgccgccca cacctcgagg gcattcgcca
      661 tcgccactct gttacgcaca ccccgccgac gcatcatacg cacaccccac cgcacccacc
      721 gtccttctac attgcgacag aagcgcgatg cgatgaaggc gcgaacatgg ttaagctgtg
      781 ggaatagtgg ggaaaacttc ggccgccggt ccggcgccgg cggctcgccg gagcgacggg
      841 cttgactttc cgttgcatgg caagcgcccg cacacgcgag tcatgaaccg ggccgccgag
      901 accggtcggc gccatcgcgc gcgcctgtgt gattttcagc acaccctttg cgccggcttt
      961 gtgccacgtt aggggcgtcg acacgtgcct cagccggcag gcctgatcac cctcgaccgg
     1021 cgagtgaccc ccaacgggga gcgggcctcg gcccgcccgg gtccaacaac agcgatgcag
     1081 cgatgaaagg gctccgaagc gcaagctccg gagcttcctt tatgggcgcc atcgtggtcg
     1141 caggtgtctc gcggaaggtg aggcgcggcg gacgctaaaa ctccaagcca ccgattttgc
     1201 ttttgccgcg gcgctggtat cagcgtcgcc aaccttcgct ggtgctcggc gccggcgtct
     1261 cccatacccc tgtccgtcca agacgggaag atcatcactt cggcaggaac gcctttacgc
     1321 taggagcttt gatggccagc caatcccatg cgccgatggc gcagatcgat cgtccgcaga
     1381 atctcggcaa cccgcagctg ggttggggca gcgacgccat cgcccagctg atctcgcggc
     1441 tcgatctcaa atacgtgagc ctcgtgcccg gcgcgagctt ccgcgggctg catgacagcc
     1501 tcgtcaacta tctcggcaac agcaacccgc agatggtgat ctgcctgcac gaggagcatg
     1561 cggtcgcgat cgcgcacggc tacgccaagg tgaccgacga gccgatggcc gtctgcctgc
     1621 acaccaatgt cgggctgatg cacgcgacca tggcgatctt caacgcgtgg tgcgaccgca
     1681 ggccggtcgt gatgttcggc gccaacgggc ccgtcgacgc cgcccagcgc cgcccgtgga
     1741 tcgagtggat ccacaccgcc caggaccagg gcgccctgat ccgccactac accaagtggg
     1801 acgaccagcc ggcgagcgtt cccgccgcct tcgagtcgat cctgcgcgcc aaccagatcg
     1861 cgcgcacgcc gccttacggt cccgtctatg tctgcctcga cgccgggctg caggaatcca
     1921 agctcgcggg cgagccggcc atgcccgaca tcggccgcta cgcgccgatg ccgccgcaag
     1981 gcgccgacgc cgacctcatc gccaaggcgg ccgactggct gctcgccgcc aggaagccgg
     2041 tgatcctgct cgggcgcgtg tcacgcagcc aggaggactg ggaccggcgc gtcgccttcg
     2101 ccgaggcgct cggcgcgacg gtgctgacgt cgctgcacga tgcctccgcc ttcccgaccg
     2161 atcacccgct ccacccgatc ggcccgcgct tccggccgac ggcggacacg aacgccatcc
     2221 tcaaggaggc cgacgtgatc ctgagcctcg actggctcga tctcggcggc ttcctcaagg
     2281 tcaccttcgg gtcgcacgac atcccggcga agatcatcaa ctgcacggtc gatccgtata
     2341 tccacaacgg ctggagcatg gactaccaga tgctgccgcc ggccgacctc accgtgctcg
     2401 ccccgcccga cgtcgccgtg aaggcgctgc tcaaggcggt cgaagggcgc ggcaagaagc
     2461 cagcggcaaa gtatgcggag cgccgcacca cgcggctacc gctcaagacc agcgccaacg
     2521 gcgccaaggg gccgatgggc ctcgtcgatt tcgccgcctg cctgcgcgac accttcgccg
     2581 gccagccggt cagctacatc ag
//
LOCUS       DATAIQ010000453         3520 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_116822, whole genome shotgun sequence.
ACCESSION   DATAIQ010000453 DATAIQ010000000
VERSION     DATAIQ010000453.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3520)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3520)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3520
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_116822"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..321)
                     /locus_tag="VHN20_07515"
     CDS             complement(<1..321)
                     /locus_tag="VHN20_07515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725652.1"
                     /translation="MRSIAAAAFPFLVVGGIWEIVAHLGVFPERLFPTLETIAATFVK
                     LTVSGLLPRHAAETLLRLLAGFAIAGVVGVVAGIAMGRSRRAQDILLPLVSLGAPIPG
                     LAYAP"
     gene            581..1471
                     /locus_tag="VHN20_07520"
     CDS             581..1471
                     /locus_tag="VHN20_07520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020607881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HEX2725653.1"
                     /translation="MTPRERSTYSAVVDRPPLKLPGGARIVVWSIVNLEVWDIGRPMA
                     RQVLAPPTGETLLPDVPNWSWHEYGMRVGVWRFFKLYERLGIRPTLSINARVCEDYER
                     VARQARDAGWEFMGHVWDQMPIHKVPDQRGMIHRSLDTLERFTGKRPVGWLGPGLTQT
                     FETPDLLAEAGIKYIGDWVWDDEPAQIATRHGPLVTLPYTMELNDIPTMMVQHHESPY
                     WLTRCKDAFDRLYGEGEERVKIMAIAIHPYISGQPHRIRYLEEVYDYVNQFEGVLHWN
                     GEEILEWYQASGRTGAQAAE"
     gene            1564..2082
                     /locus_tag="VHN20_07525"
     CDS             1564..2082
                     /locus_tag="VHN20_07525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725654.1"
                     /translation="MRVSGFAAAAALTILATGRVAAQPAEAAFLERFRGTWEGGGTVR
                     RSIDPGPWTVRCTLNGVPGPNAISIQGTCTGALIVQRQIGAELTFDPRARVYRGVYVG
                     ARVGPAALAGTRGGDVVSLVITWPAPVAGDTRAAMTIHNRGDGTLRIVTEDNLVPGGP
                     IQQTANLVLQRR"
     gene            2160..3044
                     /locus_tag="VHN20_07530"
     CDS             2160..3044
                     /locus_tag="VHN20_07530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012330531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein subunit M"
                     /protein_id="HEX2725655.1"
                     /translation="MKAPAFDYVRARSLPEALSLLQQHGEAAKIIAGGQSLVPALNLR
                     LVTPALLVDIGGLAELKGIAVKDGVVRIGALTRHVELQRAPDIARHTPLIAEAITHVA
                     HPAIRNRGTIGGSLAQADPASELPACAVALQATIVVAGPQGERRIPADDFFRGLYETA
                     LSPHDVLVAVEVPAIRPGERSAFLELARRSGDYALVGLACHAGVADAALRELRLAYFA
                     VGTKPTLATNAARCLVGAPLSGASIADAQEALAQDLAPQDDIHASAATRRQLARVLLR
                     RALAELLPEAAMAERKRA"
     gene            3041..>3520
                     /locus_tag="VHN20_07535"
     CDS             3041..>3520
                     /locus_tag="VHN20_07535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006021836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEX2725656.1"
                     /translation="MTGTLSISLTVNGEPVTAMVPARMHLADFVRDELGLTGTHIGCE
                     HGVCGACTIRVDGEIVRGCLVLAVQADGAAVETVEGVSDSGEVGDLQKAFEARNALQC
                     GYCTPGMLLAAQELLARDAEPSRDAIREHLSGNYCRCTGYQAIVDAVEAAARTRAGGA
                     "
BASE COUNT          557 a         1242 c         1227 g          494 t
ORIGIN      
        1 cggcgcatag gcgaggccgg gaatcggcgc gccgaggctg acgagcggca gcaggatgtc
       61 ctgtgcgcgg cgcgaacggc ccatggcgat cccggcgacc acgccgacga cgccggcgat
      121 ggcgaagccg gcgagcaggc gcagcagcgt ctcggcggca tggcgcggca gaagcccgga
      181 cacggtcagc ttgacgaagg tcgcggcgat cgtctcgagc gtcgggaaca gccgctcggg
      241 aaagacgccg agatgcgcga cgatctccca gatgccgccg accaccagga acgggaaggc
      301 cgccgccgca atgctgcgca acgggcgcgc gatgctcccg cgagccgttc cgggcctgcc
      361 tgcaagatcg aaggcgatgg acatttgtcg ggcgatcatc attgttacgc gcgacccgtt
      421 gtcaacgtca ccatgcgctg tcattccggg acgggccgga ggcccgggcc cggaaaccac
      481 gtccgggtgc gacgctgcga ttcctgtggc ccccagtcgt gggttccggg ctcgacgctt
      541 cgcgtcgccc cggaatgaca tcacgagaga gagcaacccc atgaccccac gcgaacgctc
      601 cacctactcg gccgtggtag accggccgcc cttaaaattg cccggcggcg cgcgcatcgt
      661 ggtgtggtca atcgtcaacc tggaagtttg ggacatcggc cggccgatgg cgcggcaggt
      721 gctggcgccg ccgaccggcg agacgctgct gccggacgtg ccgaactgga gctggcacga
      781 atacggaatg cgcgtcggcg tctggcgctt cttcaagctc tacgagcgcc tcggcatccg
      841 cccgacgctg tcgatcaacg cgcgcgtctg cgaggactac gagcgcgtgg cgcgccaggc
      901 gcgcgacgcc ggctgggagt tcatgggcca cgtctgggac cagatgccga tccacaaggt
      961 tccggaccag cgcggcatga tccaccgctc gctcgacacg ctcgagcgct tcacgggcaa
     1021 gcggccggtc ggttggctcg ggccgggcct cacgcagaca ttcgagacgc ccgacctcct
     1081 ggcggaagcg ggcatcaaat atatcggcga ctgggtgtgg gacgacgagc cggcgcagat
     1141 cgcgaccagg cacggtccgc tcgtgacgct gccctacacg atggagctca acgacatccc
     1201 gaccatgatg gtgcagcacc acgaatcgcc ctactggctg acccgctgca aggacgcctt
     1261 cgaccgcctc tacggcgagg gcgaggagcg tgtgaagatc atggccatcg ccatccaccc
     1321 ctacatctcc ggccagccgc accgcatccg ctacctcgag gaggtctacg actacgtgaa
     1381 ccagttcgag ggcgtgctgc actggaacgg cgaggagatc ctggagtggt accaggcgag
     1441 cggccggacg ggcgcgcagg cggccgagta gccgcaattt gatggccggc gcgcgggccc
     1501 gcccggcact gcgccatgaa agcaggtata taacttcggc gctctgttcg tcggagtttt
     1561 tgcgtgcgcg tctcgggatt cgcagcagcg gccgcgctga ccattctcgc cacgggacgc
     1621 gttgcagccc aaccggccga ggcggcgttt ctcgaacgct tccgcggcac ctgggaaggc
     1681 ggcggcacgg tccggcgcag catcgacccg ggtccgtgga ccgtgcgctg caccctcaac
     1741 ggcgttccgg gaccgaatgc catcagcatc cagggcacct gcaccggggc gctgatcgtg
     1801 cagcgccaga tcggggcgga gctcaccttc gatccccgcg cccgcgtcta ccgcggcgtc
     1861 tatgtcggcg cccgcgtcgg gccggcagcg ctcgcgggca cgcgcggcgg cgacgtcgtt
     1921 tctctcgtga tcacatggcc ggcgcccgtc gccggcgaca cgcgcgccgc catgaccatc
     1981 cacaaccgcg gcgacggcac gctgcgcatc gtcaccgagg acaacctcgt cccgggcggg
     2041 ccgatccagc agaccgccaa cctcgtcctg cagcggcgct agcctcttga cgacgttcgc
     2101 gccggcagtg tctgttgcgc gtccgacaag aacagcgaga gaaggggagg gatgtccgcg
     2161 tgaaagctcc ggctttcgat tacgtgcgcg cgcggtccct gcccgaggcg ctgtccctgc
     2221 tgcagcagca cggcgaggcg gcgaagatca tcgccggcgg gcaaagcctc gtcccggccc
     2281 tgaatctcag gctcgtcacg ccggccctgc tggtcgatat cggcggcctc gccgagctaa
     2341 aaggcatcgc ggtcaaggac ggtgtcgtgc gcatcggcgc gctgacgcgc cacgtggagc
     2401 tgcagcgcgc gccggacatc gccagacata cgccgctgat cgccgaggcg atcacgcatg
     2461 tggcgcatcc cgcgatccgc aaccgcggca ccatcggcgg cagcctcgcc caggcggacc
     2521 cggcttctga gctgccggcc tgcgccgtgg cgctgcaggc gacgatcgtc gtcgcaggcc
     2581 cgcagggcga acgccgcatc cccgccgacg attttttccg cggcctctat gagacggcgc
     2641 tgtcgccgca cgacgtgctc gtcgcggtcg aggtgccggc gatccgcccc ggagagcgct
     2701 cggcattcct cgagctcgcc cgccgcagcg gcgactacgc gctcgtcggc ctcgcctgtc
     2761 acgccggcgt tgccgacgca gccttgcgcg agctgcgtct cgcctatttc gccgtcggca
     2821 cgaagccgac gctcgccacc aatgccgcca gatgccttgt cggggcgccg ttgagcgggg
     2881 cttcgatcgc ggacgcccaa gaggcgctcg cgcaggatct cgcgccgcag gacgacatcc
     2941 acgcctcggc cgcgacacgc cggcagctcg cgcgcgtgct gttgcggcgc gcgctggccg
     3001 agctgctgcc cgaggcagcc atggccgaaa ggaaacgcgc gtgaccggca ccctgagcat
     3061 ctctctcacg gtcaacggcg agcccgtcac ggcgatggtg ccggcgcgca tgcacctggc
     3121 cgacttcgtg cgtgacgagc tcgggctcac cggcacacat atcggctgcg agcacggcgt
     3181 gtgcggcgcc tgcacgatcc gggtcgacgg cgagatcgtg cgcggctgcc tcgtgctggc
     3241 ggtgcaggcg gacggagccg cggtcgagac cgtggagggc gtctccgaca gcggcgaggt
     3301 cggcgacctg caaaaagcgt tcgaggcgcg caacgccctg caatgcggct actgcacgcc
     3361 gggcatgctg ctcgccgcgc aggagctgct ggcgcgcgac gccgagccga gccgggacgc
     3421 catccgcgag catctttccg gcaactactg ccggtgcacc ggctatcagg ccatcgtcga
     3481 cgcggtcgag gcggcggccc gcacgagggc ggggggagcc
//
LOCUS       DATAIQ010000454         2139 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_393293, whole genome shotgun sequence.
ACCESSION   DATAIQ010000454 DATAIQ010000000
VERSION     DATAIQ010000454.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2139)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2139)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2139
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_393293"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(197..1648)
                     /locus_tag="VHN20_07540"
     CDS             complement(197..1648)
                     /locus_tag="VHN20_07540"
                     /inference="COORDINATES: protein motif:HMM:NF020137.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M10 family metallopeptidase"
                     /protein_id="HEX2725657.1"
                     /translation="MANVYIESLRWLTPSNPFQANPDPTLPTTITYAFGGEGNYTVND
                     PESSGTSIDALGWSASEREAAVKALLAWTSVANIRLSEVAAADGATFTLLKTSETEMR
                     EYFSGERGVLAFSTLPFDYGPAYGLGPTDGYTPGIAVFNQDGYGWTSNQPGGYGYATL
                     VHEIGHLLGLDHPFDEGGHYPGTSVPEPFFPGATGAFRTGDFGLNQGVFTAMTYNDGW
                     SGEPSRNLVSGYQLGPGAFDIAAIQELYGRNWSHNAGDTTYTLPGSNTAGTGWLCIWD
                     GSGARDVIRAGAGSGACTIDLRDAPLTGPDAGGYVSWMSRVAGGFTIANGADIEDAVG
                     GAGADAITGNELANRLKGLGGNDTLRGVDGADVLCGGAGSDSLWGGQGDDDFVFAALS
                     DTGVGAKARDVIRDFQHFHDDIDLRSIDANSNLGGDQDFRFVGASAFSRSAGELRFAG
                     GLLSGDVNGDGKADLEISILNAVLTRDDLIGAA"
     gene            complement(1820..>2139)
                     /locus_tag="VHN20_07545"
     CDS             complement(1820..>2139)
                     /locus_tag="VHN20_07545"
                     /inference="COORDINATES: protein motif:HMM:NF018527.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF1236 domain-containing protein"
                     /protein_id="HEX2725658.1"
                     /translation="ASGSGAAGASAGASAGASGSVNISSEQRTQIRQRFTSVNVPTVS
                     SADFSVSVGTVIPETVTLVDVPPTIIEIVPEWRRYKVIKVGNRIIIVDPGPRRIIQVI
                     EIG"
BASE COUNT          324 a          709 c          752 g          354 t
ORIGIN      
        1 gcattcttcc gccttgtcgc ggtagtcgtc gaaattggtg tccgacatcc cgcgatctta
       61 ggacggcggt ttcgcacgcg tatagggggg gcggcggcgg cccgcgccga atcgcacaag
      121 gttgtgggga ttttgcacgc ccgcagagcc atgcgctcgc ggaaaagccc cgcggaagcg
      181 cgccgaaatg cggcgcctaa gcggcgccga tgagatcgtc acgggtcagc accgcgttga
      241 ggatcgagat ctcgaggtcg gccttgccat ccccgttcac gtcgcccgac aggaggcccc
      301 ctgcgaagcg cagctcgccg gcgctgcggc tgaacgcgct cgcgccgacg aagcgaaagt
      361 cctggtcgcc cccgagattg ctgttggcgt cgatcgatcg caggtcgatg tcgtcatgga
      421 agtgctggaa atcgcggatg acgtcacgcg ccttcgcgcc gacgcccgtg tcggacagcg
      481 ccgcgaagac gaaatcgtca tcaccctgtc cgccccacag gctgtcggag ccggcgccgc
      541 cgcacaggac atcggcgccg tccaccccgc gcagcgtgtc gttgccgccg agccctttga
      601 ggcgattggc cagctcattg ccggtgatcg cgtcggcgcc ggcgccgccg acggcgtcct
      661 cgatgtcggc gccgttggcg atggtgaacc cgccggcgac ccggctcatc cacgacacgt
      721 agccgccggc atccggcccc gtcagcggcg catcgcgcag gtcgatcgtg caggcgcccg
      781 acccggctcc cgcccggatc acgtcgcgcg cgccggatcc gtcccagatg cacagccagc
      841 cggtcccggc ggtgtttgag cccggcagcg tgtaggtggt gtcgccggcg ttgtggctcc
      901 agttcctgcc gtaaagctcc tggatggcgg cgatgtcgaa agcgcccggc ccaagctggt
      961 agccggacac aagattgcgc gacggctcgc cggaccagcc gtcgttgtag gtcatggcgg
     1021 tgaagacgcc ctggttcagc ccgaagtcgc cggtccggaa ggcgcccgtg gcgcccggga
     1081 agaacggctc cggaacgctc gtgccgggat agtggccgcc ttcgtcgaaa ggatggtcga
     1141 ggccgagcag gtgcccgatc tcgtgcacga gggtggcata gccgtagccg cccggctggt
     1201 tcgacgtcca gccatagccg tcctggttga acacggcgat tcccggcgtg tagccgtcgg
     1261 tggggccgag gccataggcc ggtccgtagt cgaacggcag cgtcgagaac gcaagcacgc
     1321 cgcgctcgcc ggagaaatac tcgcgcatct ccgtttcgct ggttttcagc agcgtgaagg
     1381 ttgctccgtc ggccgcagca acctcgctga gccggatgtt ggcgacggac gtccaggcca
     1441 ggagcgcctt gaccgcggcc tcccgttcgg aggccgacca gccgagggcg tcgatgctgg
     1501 tcccggacga ctccgggtcg ttcacggtgt agttgccttc gccgccgaag gcgtaggtga
     1561 tcgtcgtcgg aagcgtcggg tcgggattgg cctggaacgg gttgctcggc gtcagccagc
     1621 gcagggactc gatatagaca ttcgccatcg ggcctcccca tcgctctatc gaagcgacgg
     1681 aagcctaggc ccgcgatttt ttgacggcaa gaactgcagt tgcggcgttg tcacgcgccc
     1741 gtccggcgcg atccgtcctg cgaggctccc gcctcggggt tgccgaggcg gggttcgaag
     1801 gtggcgacgc ggtggacgct cagccgatct cgatgacctg aatgatgcgg cgcgggccgg
     1861 ggtcgacgat gatgatgcgg ttgccgacct tgatgacctt gtagcgccgc cactcgggaa
     1921 cgatctcgat gatcgtcggt gggacgtcga ccagggtcac ggtttcgggg atcacggtgc
     1981 cgaccgaaac cgagaagtcg gcgctgctca ctgtcggcac gttcacgctc gtgaagcgct
     2041 ggcggatctg ggtgcgctgc tcgctcgaga tgttgaccga gcccgaagcg ccggccgacg
     2101 cgcccgcgct cgcgccagcg gcgccgctgc cgctcgccc
//
LOCUS       DATAIQ010000455         2358 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_393327, whole genome shotgun sequence.
ACCESSION   DATAIQ010000455 DATAIQ010000000
VERSION     DATAIQ010000455.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2358)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2358)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2358
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_393327"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(182..871)
                     /locus_tag="VHN20_07550"
     CDS             complement(182..871)
                     /locus_tag="VHN20_07550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RlmE family RNA methyltransferase"
                     /protein_id="HEX2725659.1"
                     /translation="MSGKSGGGTRTLKQRLKTAHKRSLSSQKWLERQLNDPYVARAKR
                     EGWRSRAAFKLIELDDKYRLLKPGQRIVDLGAAPGGWAQVAARKVGSADGKGRVVGID
                     LLPIDPLPGAEFITLDFLDPDAPERLTALLGGPADVVMSDMAANATGHKKTDHLKIMG
                     LAEAAAEFARAVLAPRGTFLAKVLQGGSEGALLADLKRDFATVRHVKPAASRSDSAEL
                     YVLATGFRGRA"
     gene            complement(882..1871)
                     /locus_tag="VHN20_07555"
     CDS             complement(882..1871)
                     /locus_tag="VHN20_07555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007568121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ppx/GppA phosphatase family protein"
                     /protein_id="HEX2725660.1"
                     /translation="MGGAYGALDLGTNNCRLLIAEPLHSGFRVVDAFSRIVRLGEGLG
                     RGNRLREGAIRRTIEALRICKQKMEARDVVRARLIATEACRLAANGAEFIARVEDELG
                     LHLEVVDRQTEAYLAVTGCASLADPYAQSVIVFDIGGGSTEIAWLDGVAPNATADPCK
                     RIRAWDSLPAGVVTLAERHGGVEVSPQSFEGMVEEVSDLLADFALIAGPAASAPYFHL
                     LGTSGTVTTVGGIFLGLPRYDRRRVDGLWMRDQDISGVIDRLIGTGFDQRAANPCIGR
                     DRADLVLAGCAILEAIRRAFPSDRLRIADRGLREGILLNLMREDGVWRRRKGE"
     gene            complement(2144..>2358)
                     /locus_tag="VHN20_07560"
     CDS             complement(2144..>2358)
                     /locus_tag="VHN20_07560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003606671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX2725661.1"
                     /translation="ILMLSKPRRYVVDRALALGVNEIISKPFSPKVLWSRLDEVINRP
                     RPFVQAKGLLRPTPRANGLDGGKAAA"
BASE COUNT          340 a          800 c          875 g          343 t
ORIGIN      
        1 tattgcccgc cttatgcacg gctggcctcc ttgtcgggat cgttttgacg taccgagaca
       61 aagagcccgg cgcctaaggg ttgctaccct ctccccggtc ggggcgctgc cggtcgcgct
      121 gccgccccat ccgacgcgca tgctgcgcat gcgcgccacc ttcccctcgc ggggaaggat
      181 gttacgcccg tccccggaac ccggtggcga ggacgtagag ctcggcggaa tcggagcggc
      241 tggcggccgg cttgacgtgg cgcacggtgg cgaagtcgcg cttgaggtcg gcgagcagcg
      301 cgccctcgct gccgccctgc agcaccttgg cgaggaaggt cccgcggggc gcgagcacgg
      361 cccgggcgaa ctcggcggcg gcttccgcga gccccatgat cttgaggtgg tcggtcttct
      421 tgtggccggt ggcgttggcg gccatgtccg acatgacgac gtcggcgggg ccgccgagca
      481 gcgcggtcag gcgctcgggc gcgtcggggt cgaggaaatc gagcgtgatg aactcggcgc
      541 ccggcagcgg gtcgatcggc aggaggtcga tgccgaccac cctgcccttg ccgtcggcgc
      601 tgccgacttt cctggcggcg acctgcgccc agccgcccgg cgccgcgccg agatcgacga
      661 tgcgctggcc cggcttcagc aggcggtatt tgtcgtcgag ctcgatgagc ttgaaggcgg
      721 cgcgcgagcg ccagccctcg cgcttggcgc gcgccacgta aggatcgttg agctgccgct
      781 cgagccattt ttgcgacgac aggctgcgct tgtgggcggt cttgagccgc tgcttgagcg
      841 tgcgcgtgcc gcctcctgat tttccgctca ccagaaacgt ctcactcgcc tttgcggcgg
      901 cgccacacgc cgtcctcgcg catcaggttg agcaggatgc cctcgcgcag gccgcggtcg
      961 gcgatgcgca gccgatcgga cgggaaggcg cgccggatcg cctcgaggat ggcgcagccg
     1021 gccagcacga gatcggcacg atcgcggccg atgcaagggt tggcggcgcg ctggtcgaag
     1081 ccggtgccga tcaggcggtc gatcacgccg gagatgtcct ggtcgcgcat ccacaggccg
     1141 tcgacgcggc ggcggtcgta gcgcggcagc ccgaggaaga tgccgccgac ggtggtcacc
     1201 gtgcccgagg tgccgagcag atggaaatac ggcgccgacg ccgccgggcc ggcgatcagg
     1261 gcgaagtcgg cgagaaggtc ggagacctcc tcgaccatgc cttcgaagga ttgcgggctc
     1321 acctcgacgc cgccgtggcg ctcggccagg gtcacgacgc ccgccggcag cgagtcccag
     1381 gcgcggatgc gcttgcacgg gtcggcggtg gcgttggggg cgacgccgtc aagccaggcg
     1441 atctcggtcg agccgccgcc gatgtcgaac acgatcaccg actgcgcata ggggtcggcg
     1501 aggctggcgc agcccgtcac cgccagatac gcctcggtct ggcggtcgac gacctcgaga
     1561 tgcagcccga gctcgtcctc gacgcgggcg atgaactcgg cgccgttggc ggcgagccgg
     1621 cacgcctcgg tggcgatcag gcgggcacgc accacgtcgc gcgcctccat cttctgcttg
     1681 cagatgcgga gcgcctcgat ggtgcgccgg atggcgccct cgcgcaggcg gttgccgcgc
     1741 ccgagcccct cgccgaggcg cacgatgcgc gagaacgcgt cgaccacccg gaacccggaa
     1801 tggagcggct cggcgatcag caggcgacag ttgttggtgc cgagatcgag ggcgccgtag
     1861 gcgccgccga tccagcgggg ggcgagcccg taggccggcc gggcaaagcg cgacggcggc
     1921 gcatgggagc gggcgggcga aaaggtgccc gcggacggcg gctcaggctc gtccgagccg
     1981 gtcttcagaa cagcctcatc cttgacctgc acggtcgcaa ttccctgcca agccggggaa
     2041 ccggcttgcg cattcgagcg tgccgggacg tgaccgcccc gtacctcgat cgttgccgtg
     2101 agactaacaa ggcccccatg gccctgccaa gtgcaggcgc gcctcaggcg gcggctttcc
     2161 cgccgtcgag gccgttggcg cgcggggtcg ggcgcagcag ccccttggcc tggacgaacg
     2221 gccgcgggcg gttgatgacc tcgtcgagcc gcgaccaaag tacctttggc gagaagggct
     2281 tggagatgat ctcgttgacc ccgagggcga gcgcccggtc gaccacgtag cggcgcggct
     2341 tcgacagcat cagaatga
//
LOCUS       DATAIQ010000456         1507 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_57157, whole genome shotgun sequence.
ACCESSION   DATAIQ010000456 DATAIQ010000000
VERSION     DATAIQ010000456.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1507)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1507)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1507
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_57157"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(177..>1507)
                     /locus_tag="VHN20_07565"
     CDS             complement(177..>1507)
                     /locus_tag="VHN20_07565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725662.1"
                     /translation="RRTGEDEAMVNTAPAAGNSANESTTRRGAGAARSGARQPSFFEL
                     SQLMAIALFPARQGGTLKCRSQAYPNGPWAADWAPVGTGAYAVMGAGIARDGRVAIAA
                     QTARGNVEYIVEASATNSGKTTGNPGDPRWNPPVDLGTPGGALTQILLGRGAGGRVQV
                     FGLDKNSHVWWAFENPPRMVQRTVTVTPPGTHKPITIPVQELAPPDKPWSAWVELSGQ
                     QVTCIALASNADGRIAVFGLAGKGAERAALTYNEQSAAEAASAADWSGWTALAADAAL
                     PLKSLATEVDSQGAINVFFIDGTGQVARVRQTPPASRTWSRTSRPGLFNGQFVNVAAR
                     IDADRHLMLVATSNSGPVYANQQRSVADAQWSGWAPIMPAANVGELALDYNADGRLTL
                     FARETKTSRSLLATSQVAVNSTEWDAQWTDLGAKGVLAVAVVRDLTPSAP"
BASE COUNT          201 a          549 c          516 g          241 t
ORIGIN      
        1 gcttcacggc gtcgggccat ggcacgacgg ccaactcgtc ccgccgggtc gaggcataaa
       61 ggccttccat gaatggcagg tccgcatcga ccaccggcct gaggctgagg ccggccgcca
      121 tagcgtgcgg ccacggcccc gcggagctcc tcggcgcggc gcgacacagg atgccgtcag
      181 ggcgcgctcg gggtgaggtc gcgcacgacc gccacggcga gcacgccctt ggcgccgaga
      241 tcggtccact gcgcgtccca ttcggtcgag ttgacggcga cctgcgacgt cgccaggagc
      301 gagcggcttg tcttcgtctc gcgagcgaac agcgtcagcc gtccgtcggc attgtagtcg
      361 agcgcgagct ccccgacatt cgcggccggc atgatcggcg cccagccgct ccactgcgcg
      421 tctgcgacgc tgcgctgctg gttggcgtag accgggccgc tgttgctcgt ggcgacgagc
      481 atcagatgcc ggtccgcgtc gatgcgtgcg gcgacgttca cgaactggcc gttgaacagc
      541 cccggccggg acgtcctgct ccaggtgcgg ctcgccggtg gggtttgccg cacgcgcgcc
      601 acctggcccg tgccgtcgat gaagaagaca ttgatcgcgc cctggctgtc gacctcggtc
      661 gcgagcgatt tgaggggcag cgcggcatcc gccgccaatg ccgtccagcc gctccagtcc
      721 gccgcgctcg ccgcctccgc cgcgctctgc tcgttgtagg tcagggcggc acgctcggcg
      781 cccttcccgg ccagaccgaa aacggcaatg cgtccgtcgg cgttgctggc caacgcgatg
      841 cacgtcacct gctggccgga aagctcgacc caggcgctcc acggcttgtc cggcggcgcc
      901 agttcctgga ccgggatggt gatcggctta tgggtgccgg gcggggtgac cgtcaccgtc
      961 cgctgcacca tgcggggcgg gttctcaaag gcccaccaga catgagaatt cttgtcgagg
     1021 ccgaacacct gcacgcggcc gccggcgccg cggccgagca ggatctgggt caacgcgccg
     1081 ccgggcgtgc cgagatcgac cggcggattc cacctcggat cgccgggatt gccggtcgtc
     1141 tttccagaat ttgtcgccga tgcttcgacg atgtactcga cgttgccccg cgccgtctgc
     1201 gccgcgattg cgacgcgccc gtcgcgcgcg atgccggccc ccatcaccgc gtaagcgccc
     1261 gtgccgaccg gcgcccagtc ggcggcccat ggcccgttcg ggtaggcctg cgagcgacat
     1321 ttgagcgtgc cgccctgcct cgccgggaac agggcgatcg ccatcaactg cgacaactcg
     1381 aaaaacgagg gctggcgggc tccggatcgc gccgcccctg cgccccgccg cgtggtgctc
     1441 tcgttcgcgg agttgcctgc cgccggtgcc gtgttcacca tggcctcgtc ctcccctgtc
     1501 cgacgtc
//
LOCUS       DATAIQ010000457         2009 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_57178, whole genome shotgun sequence.
ACCESSION   DATAIQ010000457 DATAIQ010000000
VERSION     DATAIQ010000457.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2009)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2009)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2009
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_57178"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1161)
                     /locus_tag="VHN20_07570"
     CDS             complement(<1..1161)
                     /locus_tag="VHN20_07570"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX2725663.1"
                     /translation="MPPTFALRFVAGGNMLRGFTIALGALAALVVGAAPVDARALRWA
                     RSMDVSTLDPHAANTGPEILLAHQVYEPLIIRQVDGWMVPALATSWALTADPKIWEFK
                     LRPNVRFHDGAAFTADDVVFSIERARSEASDMKSLLSSTESVTKVDELTVRIRTKGPD
                     PLLPNNLTDIFIMDREWSEKNGATRPHNAKTKDASFAAAHANGTGAYALVSRQPGVKT
                     VLRQNDGYWGRGEFPLEITEIDYRPIPDNAARIAALQAGDVDFVQDVPVQDAQRLQGT
                     PGIRVNTGPENRSVFLGMDVGSRELRSSNIKGRNPFADRRVREAVNIAIDRDAIRRVV
                     MLGQSVPAGIIVPPFSHGYSKDLDRLPQVDRQRARALLQEAGYRDGFSVVLNC"
     gene            complement(1220..>2009)
                     /locus_tag="VHN20_07575"
     CDS             complement(1220..>2009)
                     /locus_tag="VHN20_07575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725664.1"
                     /translation="ITALKARTAGTASDTRLDRIELTGLGFHWPNAGLVHRLHNVLGY
                     NPLRLDVYSSATGAGDHVALPEQRTFAPLFPSYRSVLADLLGLRFIATGVPVERIDAR
                     LRSGDLTLLAETGDGFLYENPRAAPRVMYAPAARAADFAALLRDGNWPDVDYSRTVLV
                     EPGGLRPEAPSRAAPGAGRARIVAYSNTDVVIDVEAAAAGYVVLNDPWHPWWQVSVDG
                     QPVPMLRANVLFRAVWVPAGSHAVRFEFRPLAGLWRWLRAFTSL"
BASE COUNT          318 a          668 c          705 g          318 t
ORIGIN      
        1 gcagttgagc acgaccgaaa agccgtcgcg gtagccggct tcctgcaaca gcgcgcgcgc
       61 ccgctgccgg tcgacttgcg gcagccggtc gagatccttg ctgtagccat gcgagaatgg
      121 cggcacgatg attccggccg gcacggactg gccgagcatc acgacacgcc ggatggcgtc
      181 ccggtcgatc gctatgttga cggcttcgcg cacgcgccgg tcggcgaagg ggttgcgtcc
      241 cttgatgttg gacgacctca gctcgcgcga gccaacgtcc atccccagaa agacggagcg
      301 gttttccggc cccgtattga cgcggatccc gggcgtgccc tgcagccgtt gtgcgtcctg
      361 gacgggcacg tcctggacga agtcgacgtc gcccgcctgc agtgcggcga tgcgcgcggc
      421 gttgtcgggg atcggccgat agtcgatctc ggtgatctcg agcgggaact cgccccgccc
      481 ccaatagccg tcgttctggc gcaagaccgt cttcacgccc ggctgccggc tgacgagcgc
      541 gtaggcgccc gttccgttcg cgtgagctgc cgcgaagctt gcgtcttttg tcttggcgtt
      601 gtgaggccgg gtcgcgccgt tcttctcgct ccattcccgg tccatgatga agatgtcggt
      661 caggttgttg ggcaagagag gatccggtcc cttcgtcctg atgcggacgg tgagctcgtc
      721 gaccttcgtg acgctctccg tcgaggacag cagcgacttc atgtctgatg cctccgagcg
      781 cgcacgctcg atcgagaaca ccacgtcatc ggcggtaaag gccgcgccgt cgtgaaaccg
      841 cacgttcggc cgcagcttga actcccagat tttcggatcg gccgtgaggg cccacgaggt
      901 ggccagggcc ggaaccatcc agccgtcgac ctggcggatg atgagcggct cgtagacctg
      961 atgcgcgagc aggatctccg ggccggtatt ggcggcatgt gggtcgagcg tgctcacgtc
     1021 catggagcgt gcccaccgca gggcgcgcgc gtcgacgggt gccgcgccga cgacaagagc
     1081 cgcaagcgct cccagcgcta tggtgaatcc ccgcaacatg tttccgccgg caacgaagcg
     1141 cagcgcgaat gtaggtggca cgcgcggcat tgtcacggtg cgcggcagca gcccgcgcgc
     1201 cgggtctcgc cataccatct cacaaggacg tgaaagctct aagccaccgc cagagtccgg
     1261 ccagcgggcg gaactcgaac cggacggcgt ggctgccggc cggcacccac accgcgcgga
     1321 acagcacgtt ggcacgcagc ataggcaccg gctgtccgtc gacgctcacc tgccaccacg
     1381 ggtgccaggg atcgttgagg acgacgtagc ccgccgccgc cgcctcgacg tcgattacga
     1441 cgtcggtgtt gctgtaggcg acgatgcggg cccttcccgc gcccggcgcc gcgcggctcg
     1501 gcgcctcggg gcgcaagccg ccgggttcca cgagcaccgt cctcgaatag tcgacatccg
     1561 gccagttccc gtcccggagc agggccgcga aatccgcggc acgggcggcg ggtgcataca
     1621 tgacgcgggg agccgcgcgc gggttctcgt agagaaagcc gtcgccggtc tcggcgagga
     1681 gcgtgagatc gcccgaacgc agccgggcgt ctatccgttc gaccggcacg ccggtcgcga
     1741 tgaagcggag gccgagcagg tctgccagca cggaccggta cgacgggaac agcggcgcga
     1801 aagtccgctg ctccggcaag gcgacgtggt cgcccgcccc ggtggcggac gagtagacgt
     1861 cgagccgcag cgggttgtag ccgaggacgt tgtgcagccg gtgcacgagg ccggcattcg
     1921 gccagtgaaa gccgagaccg gtcagctcga tgcggtcgag ccgggtgtcc gaggctgtcc
     1981 cggcggttct ggccttgagc gccgtgatc
//
LOCUS       DATAIQ010000458         1737 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_439513, whole genome shotgun sequence.
ACCESSION   DATAIQ010000458 DATAIQ010000000
VERSION     DATAIQ010000458.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1737)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1737)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1737
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_439513"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..324
                     /locus_tag="VHN20_07580"
     CDS             <1..324
                     /locus_tag="VHN20_07580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014492559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX2725665.1"
                     /translation="NPEVVKKFIAASLKGWSFAIDNPEKTIKHIKALFPDLNEKLATA
                     ELAAITPLFCSAGAKFVGKAEDEHWARTQTLLSEVKLLPEGQDPRSYYTNEFLPPSSE
                     MRPCK"
     gene            377..889
                     /locus_tag="VHN20_07585"
     CDS             377..889
                     /locus_tag="VHN20_07585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014492558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC/PaaZ C-terminal domain-containing protein"
                     /protein_id="HEX2725666.1"
                     /translation="MRNKPRQGYRFDDLFVGMRFRSPGRTITDADLVSFAGLTGDYSE
                     LHTSDVYARSSQFGRRVAHGMLGLAYAHGLMWARTGELRETAVAFLGIDGWKFLGPIF
                     VGDTIFVDYELAELRDSRSRPTQAIATFDVKVVKQDGSVVQEGRKALLVSKIPLEAVA
                     ASAGPTPPSN"
     gene            902..1735
                     /locus_tag="VHN20_07590"
     CDS             902..1735
                     /locus_tag="VHN20_07590"
                     /EC_number="7.6.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014492557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2725667.1"
                     /translation="MTPAPEDDRRKSGVPIIIRNVSKAFGEDGDTPFLALKNLDVSIP
                     AGQFISVVGASGCGKSTLMLMIAGLLKRTTGEITVDGRTVTRPITDVGIAFQDHLLLE
                     FRTAFENVMLHAVIRGLDRNMLARRAKDLFAQLKLEHAMDKYPRQLSGGMRQRVSLIR
                     TLVHEPSLILMDEPFGALDALTRLQVRTDLENLWMRRRPTVVFITHSVEEAVGLSDRI
                     LVMSPSPGEVIDEVHVDLPRPRPIVLGDAPEFGAYVDRIHRQFERMGILHSVTPQPAV
                     A"
BASE COUNT          312 a          577 c          552 g          296 t
ORIGIN      
        1 aatcccgagg tcgtgaagaa gttcatcgcg gctagcctta agggctggtc cttcgcgatc
       61 gacaatcccg agaagacgat caagcacatc aaggcgctgt ttccggacct gaacgagaag
      121 ctcgccaccg ccgagctggc ggcaatcacg ccgctcttct gcagcgccgg cgccaaattc
      181 gtcggcaagg ccgaggacga gcactgggcc cgcacccaaa cgctgctctc ggaggtgaag
      241 ctgctccccg agggacagga tccaaggagc tactacacca acgagtttct accgccgagc
      301 agcgagatgc ggccgtgcaa gtaaggcgcc ggtcagcccc ctgctgactc aagctgaacg
      361 gagcttcggg cgcatcatga gaaacaagcc gaggcagggc taccgcttcg acgacctgtt
      421 cgtcgggatg cgcttccgca gccccggccg caccatcacc gatgccgatc tggtgagctt
      481 cgccggactg accggcgatt attcggagct gcacaccagc gacgtctacg cccggagcag
      541 ccagttcggc cgcagggtgg cccacggcat gctcgggctc gcctatgccc acggcctgat
      601 gtgggcgcgc accggcgaat tgcgggagac cgcagtcgcc ttcctcggca tcgacggatg
      661 gaagttcctc gggccgatct tcgtcggcga cacgatcttc gtcgactacg agctcgccga
      721 gctgcgcgac agccgctcgc ggccgaccca ggcgattgcg accttcgacg tcaaggtcgt
      781 caagcaggac gggtcggtcg tccaggaggg gcgcaaggcg ttgctcgttt ccaagatccc
      841 cctcgaagcc gtcgctgcat cggccgggcc gacgcccccg tccaactgac gagtgcctct
      901 catgaccccc gcgccagagg atgatcgtcg aaagtcgggc gtaccgatca tcatccgcaa
      961 cgtgtcgaaa gcgttcggcg aggacggcga cacgcccttc ctcgcgctga agaatctcga
     1021 cgtatcgatt ccggccggac agttcatctc ggtcgtgggc gcgtccggct gcggcaagag
     1081 cacgctcatg ctgatgatcg ccggactgtt gaagcggacg accggcgaga tcacggtgga
     1141 cggccggacg gtgacgcggc cgatcaccga tgtcggcatc gcctttcagg atcacctgct
     1201 gctcgaattc cgcacggcgt tcgagaacgt gatgttgcat gcggtcatcc gcggcctcga
     1261 ccgcaacatg ctggcgaggc gggcgaagga tctcttcgcc cagctcaagc tcgagcacgc
     1321 gatggacaaa tatccgcgcc agctgtccgg cggcatgcgt cagcgtgttt cgctgatccg
     1381 caccctcgtg cacgagccgt cgcttatcct gatggacgag ccttttggcg ccctcgatgc
     1441 tctgacgcgg cttcaggtgc gcaccgatct ggagaatctc tggatgaggc gccggccgac
     1501 ggtcgtcttc atcacgcaca gcgtggagga ggccgtcggg ctttccgacc gtatcctcgt
     1561 gatgagcccg agccccggcg aggtcatcga cgaagtccac gtcgacttgc cccgaccgcg
     1621 gccgatcgtg cttggcgatg cgccggagtt cggcgcctat gtcgaccgca tccaccggca
     1681 gttcgagcgc atgggcattc tccacagcgt cacgccgcag ccggcggtgg cgtgatg
//
LOCUS       DATAIQ010000459         3334 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_57229, whole genome shotgun sequence.
ACCESSION   DATAIQ010000459 DATAIQ010000000
VERSION     DATAIQ010000459.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3334)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3334)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3334
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_57229"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(94..585)
                     /locus_tag="VHN20_07595"
     CDS             complement(94..585)
                     /locus_tag="VHN20_07595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725668.1"
                     /translation="MAWIVGRWVSPPGPWAVLLIAATLAAPAALAQGVFTPTPGSAPA
                     ASGPNSINPSAAASDRNPSAYNPSAAPSAISTPNALNPSATPSTFAPQVAPASGSTVI
                     PRSSLAPRIARPRGRATRTTGSRAPAPAPRAASAAPAVPSDARRPADQRARAIMGSVC
                     RGC"
     gene            complement(650..1183)
                     /locus_tag="VHN20_07600"
     CDS             complement(650..1183)
                     /locus_tag="VHN20_07600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0120225 - coenzyme A binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HEX2725669.1"
                     /translation="MDHDSYPDQYIRELLKSVKTIALVGASNNPARPSWIVTKYLLER
                     GYDVIPINPGWGGREILGRAVYARLKDVPRPVDMVEIFRNSEAAGPITDEALSLEPLP
                     KVIWMQLSVRNNEAARRAEEKGVQVVMNRCPKIEYGRLSGEISWQGVNSRILSAKKPA
                     LAGKGFQKLTINRPGTG"
     gene            complement(1239..1883)
                     /gene="modC"
                     /locus_tag="VHN20_07605"
                     /pseudo
     CDS             complement(1239..1883)
                     /gene="modC"
                     /locus_tag="VHN20_07605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010910184.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015412 - ABC-type molybdate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015689 - molybdate ion transport [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum ABC transporter ATP-binding protein"
     gene            complement(1880..2572)
                     /gene="modB"
                     /locus_tag="VHN20_07610"
     CDS             complement(1880..2572)
                     /gene="modB"
                     /locus_tag="VHN20_07610"
                     /EC_number="7.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007197990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015098 - molybdate ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015689 - molybdate ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter permease subunit"
                     /protein_id="HEX2725670.1"
                     /translation="MQLTPDEWIAVRLSLKVAVWATLASVPVAIAVAYALARGRFPGK
                     AMLDGLVHLPLVLPPVVTGYLLLLTFGRRGPIGAALEACCGLVLSFRWTGAALAAAVM
                     AFPLAVRAIRLSLEAVDLGLEQAAGTLGASRLWIFLTITLPLALPGVLAGMVLSFAKA
                     LGEFGATITFVSAIPGETQTVPAAIYGYTQVPGGEAGALRLSLVAIVIALVAVMASEL
                     LARRVVKDRAGL"
     gene            complement(2693..>3334)
                     /gene="modA"
                     /locus_tag="VHN20_07615"
     CDS             complement(2693..>3334)
                     /gene="modA"
                     /locus_tag="VHN20_07615"
                     /inference="COORDINATES: protein motif:HMM:NF024921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009897 - external side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015412 - ABC-type molybdate transporter
                     activity [Evidence IEA];
                     GO_function: GO:0030973 - molybdate ion binding [Evidence
                     IEA];
                     GO_process: GO:0015689 - molybdate ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter substrate-binding
                     protein"
                     /protein_id="HEX2725671.1"
                     /translation="IADAFRKDTGKRVAISYAASSALARQIEQGAPADLFVSADLNWM
                     DYLQARELIKPESRRNLVGNRLALVAPASRRDAIKLEPGALANALGGGRLAIAQVASV
                     PAGKYGKAALEHLGLWGEVAGRLAESENVRAALTFVARGEAPLGIVYESDAKVEPGVK
                     VVARFPETSHPPIVYPAALIRTSARPDAARFLETLRMPASAAILAREGFVPLD"
BASE COUNT          540 a         1107 c         1189 g          498 t
ORIGIN      
        1 attcgctccc ggctgcatgg ttccctgtgg aaggggcgcg ttcctatgag ggccgggcag
       61 gaggcctcgg gcggttgtag aggggacagg ggctcagcac ccgcggcaca cgctgcccat
      121 gatggcgcgg gccctttgat cggcagggcg tcgggcgtca gagggtaccg ccggcgcggc
      181 agaggcggcg cgcggggccg gagcaggtgc gcggctgccg gtggtccgag tggcgcggcc
      241 gcgcgggcgc gcgatccgcg gcgccaggga cgagcgcgga atgacggttg agcccgacgc
      301 gggcgccacc tgtggcgcaa aggtcgaggg cgtcgcgctc ggattgagcg cgttcggcgt
      361 cgagatggcc gagggagcgg cgcttggatt gtaggcgctc ggattgcggt cggaggcggc
      421 ggcgctcggg ttgatcgaat tcggcccgct cgcggcgggc gccgagcccg gcgtcggcgt
      481 gaacacgcct tgcgcgagcg cggccggtgc ggcgagggtc gccgcgatca ggagcaccgc
      541 ccaggggccc ggcggcgaga cccaacgacc aacgatccag gccatgctgg cacctcaccc
      601 atgaccaggg acaacgtgcc accgcgtgtg aagttcgctc tctgtgacct cagccggtcc
      661 ccggccggtt gatcgtgagc ttctgaaagc ctttgccggc cagcgccggc ttcttggccg
      721 agagaatgcg cgagttgacg ccttgccacg agatctcgcc cgacaggcgg ccgtattcga
      781 tcttcgggca cctgttcatc accacctgga cacctttttc ttcggcgcgc cgggcggcct
      841 cgttgttgcg gaccgagagc tgcatccaga tcaccttcgg cagcggctcg aggctcaagg
      901 cctcgtcggt gatcgggccg gcggcctcgg agttgcggaa gatctcgacc atgtcgaccg
      961 gccgcgggac gtccttgagc cgggcgtaga cggcgcggcc gaggatttcg cggccgcccc
     1021 aaccggggtt gatcgggatc acgtcgtagc cgcgctcgag caggtatttg gtcacgatcc
     1081 agctcgggcg tgccggattg ttcgacgcgc cgaccagggc gatcgtcttc accgacttga
     1141 ggagctcgcg gatgtattgg tcggggtagc tatcgtggtc catgatctct aactggcgtg
     1201 ttccgggcgt gagtgcaatg cgtgcgcctc gacggatagc ccgcggcgac gacccgcccg
     1261 gcatccaggc acacgatccg gtcggtcagc cgctccacct cgttgaggct gtggctcaca
     1321 tagatgatcg ggatcgacag ctcgtcacgg agccgttcga tataaggcag ggtctcgttc
     1381 ttgcgcgcct cgtcgagcga ggcgagcggc tcgtccatca ggagcaggcg cggcgaagcg
     1441 aggagcgccc tgccgatcgc cacgcgctgc ttttcgccgc ccgacaaggt ggccggtcgc
     1501 cggtcgagca gatggccgac gccgagcagc gccacgacct cgtcgagctt cgcccaatgc
     1561 tcggccgcgg gcgtgaacca gcggccgtaa gtgaggttgc gccgcactgt caggtgcggg
     1621 aacaggcggc cttcctggaa cacgtagccg atgcggcgct tgtgcggcgg cacgaagatg
     1681 cgctgctgcg tgtccgtgag aacgcggtcc tgcaccacga cgcgcgcatg cctcggccgc
     1741 acgaggccgg cgatcacgtt gagcacggtc gtcttgcccg atccggatgg gccgaacagg
     1801 gcgacgacgt gcgcgtccgt ctcgaagacc acgtcgagcg cgaaatcgcc ctgccgatgg
     1861 gtgaccgcga ccgcgatgct cataggccgg cacggtcctt cacgacacgc cgggcgagaa
     1921 gctccgacgc catcaccgcg acgagcgcaa tgacgattgc cacgaggctg agccgcagcg
     1981 ccccggcttc gccacccggg acctgcgtgt agccgtagat cgcggccggc acggtctgcg
     2041 tctcgcccgg aatcgccgac acgaaggtga tcgtggcgcc gaactcgccg agcgctttcg
     2101 cgaagctcag gaccatgccg gccagcacgc cgggcaaagc caggggcaag gtgatcgtga
     2161 gaaagatcca caagcggctg gcgccaagcg ttccggcggc ttgttcgagc ccgagatcga
     2221 ccgcctcgag agagagacgg atcgcgcgca ccgcaagcgg aaaggccatc acggcggccg
     2281 cgagagccgc ccccgtccag cggaaggaaa ggacgagtcc gcagcatgcc tcgagcgccg
     2341 cgccgatcgg gccccgccgt ccgaaggtca ggagcaagag gtatccggtc acgaccggcg
     2401 gcaagacgag gggcagatga accaagccgt ccagcatggc ctttcctgga aagcgtccgc
     2461 gcgccagcgc gtaggccacc gcaatggcga ccggcacgct cgccagcgtg gcccataccg
     2521 ccaccttcag gctcagtcgg acggcaatcc attcgtcggg tgtgagctgc acgcctcagc
     2581 ctttccgaac gcacgcgctc gtacccgcgg ctgcacgcgg gcgcgcgcgc cccgcgaggc
     2641 gcgaccggcc tgagtgcaat ggtgaaggaa agcgcttcat gatgccgccg gctcagtcga
     2701 gtggaacaaa accttcgcgc gcgaggatcg cggcgctcgc gggcatgcgc aacgtctcca
     2761 gaaaacgcgc ggcgtcagga cgggcggacg tgcggatcag cgcggcggga tagacgatcg
     2821 gcggatggct cgtttccgga aaacgcgcga ccaccttaac tcctggctct accttcgcat
     2881 cgctttcata gacgatcccg agcggcgcct cgccgcgcgc cacgaaggtc agcgccgcgc
     2941 gcacgttttc ggattcggca aggcgccctg cgacctcgcc ccacaggccg agatgctcga
     3001 gcgccgcctt gccgtatttg cccgccggca ccgatgcgac ctgggcgatc gcgagcctgc
     3061 cgccgccgag cgcgttggca agcgcgccgg gctcgagctt gatggcgtcg cgtcggctcg
     3121 ccggcgcaac aagcgcaagg cgattgccga cgaggttgcg ccggctttcc ggtttgatga
     3181 gctcgcgcgc ctgcagataa tccatccagt tgagatcggc ggagacgaac aggtcagccg
     3241 gcgcgccctg ctcgatctgc ctggcgagtg ccgaggacgc ggcataggag atcgcaacgc
     3301 gcttgccggt gtccttcctg aacgcgtcgg cgat
//
LOCUS       DATAIQ010000460         3206 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_117201, whole genome shotgun sequence.
ACCESSION   DATAIQ010000460 DATAIQ010000000
VERSION     DATAIQ010000460.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3206)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3206)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3206
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_117201"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            107..511
                     /locus_tag="VHN20_07620"
     CDS             107..511
                     /locus_tag="VHN20_07620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012455351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042314 - bacteriochlorophyll binding
                     [Evidence IEA];
                     GO_process: GO:0019684 - photosynthesis, light reaction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PRC-barrel domain-containing protein"
                     /protein_id="HEX2725672.1"
                     /translation="MQTTNTPASAARTDDRRETQALIASDKVEGTPVRRSDGEKIGTI
                     ERVMIDKRSGKVAYAVMSFGGFMGLGEEYYTLPWGVLKYNTALDAYELNLTEDQLRGA
                     PRRTAEGRDASFDRDWEEHVHRYYNATPYWGI"
     gene            683..856
                     /locus_tag="VHN20_07625"
     CDS             683..856
                     /locus_tag="VHN20_07625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012333441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1328 domain-containing protein"
                     /protein_id="HEX2725673.1"
                     /translation="MLKWALIFLVISLVAGALGFTGIASGAATLARILFGIFLAIFVI
                     LLVVALLVGEALF"
     gene            928..1398
                     /locus_tag="VHN20_07630"
     CDS             928..1398
                     /locus_tag="VHN20_07630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725674.1"
                     /translation="MVTSVFGRTSPVALVLIGFVAGALAVLTFHQLTILLLSYVGPTQ
                     GNVYSMRPIPPFGVPAMLNQAFWGGLWGCVFALLADRFPHRWPLWLAGLVFGAVAPTL
                     VGWFVVAPLKGNPVAQGFEPARMWRGPIINGMFGLGTGIFFDLLRRTLGRPRWA"
     gene            1471..1974
                     /locus_tag="VHN20_07635"
     CDS             1471..1974
                     /locus_tag="VHN20_07635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015927254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725675.1"
                     /translation="MRTVICVAALAALVSSADAQQPRPQSQQKPPAQAKARQPPPPPP
                     IFPCRTAEEVCYLGVVTGANQVTILFTNNPQVDDVESKPVNVLSGDSPAAAGSGTPLD
                     LGQHLGRVVMLTGTYDAQAGLTKAELVEVASPLVSLTVKAPLLIEEAQASQQRGGKPQ
                     PQGRPKR"
     gene            2092..2835
                     /locus_tag="VHN20_07640"
     CDS             2092..2835
                     /locus_tag="VHN20_07640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725676.1"
                     /translation="MKGALFAALLGATALVPLPLLAQTSAPEQPAQAPAAPPPAAQPA
                     PAQQAGAGSRAPANLCQELIAYARQASAPSPGAAAAAAAAQAPQPTPAQQVAPAAPPQ
                     APGAAAAAQPPGKDAPSQSGIPGPIPQAQTQGTPGPQAAGQSPAVTQPQTPAAAQPGG
                     QAPPPAPAAAAAPAAPQPPKPTAEHVAKLEAAVQNNDLAACRNYGQQMRRAGMVMPSP
                     LLALAGLDLKYLQQAQPPEPPQQPPAPQQ"
     gene            complement(2919..3083)
                     /locus_tag="VHN20_07645"
     CDS             complement(2919..3083)
                     /locus_tag="VHN20_07645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725677.1"
                     /translation="MIRFLLLLAVIAIGADAILNNGAYTQAAWRELSAQAVKIQGSGT
                     DARVSLEKRE"
BASE COUNT          482 a         1113 c         1097 g          514 t
ORIGIN      
        1 gcgatgtccc ggcatgcgga acgagatttt cggaacgtcc cggcctccgg aacgagtcgt
       61 aaagcttggc gttgccttac atgatcctca ttgagggagg gagcccatgc agacgacgaa
      121 caccccggcg agtgcggccc gcacggacga ccgacgcgaa acgcaggcgt tgatcgccag
      181 cgacaaggtc gaaggcacgc cggtgcgccg ttctgacggt gagaagatcg gcacgatcga
      241 acgcgtgatg atcgacaagc gttcgggcaa ggtcgcctac gccgtgatga gctttggcgg
      301 gttcatgggg ttgggcgagg aatactacac ccttccctgg ggcgtcctca aatacaacac
      361 cgcgctcgac gcctacgagc tcaacctgac cgaggaccag ctgcgcggcg cgccgcgccg
      421 caccgccgag ggacgcgatg cctccttcga ccgcgattgg gaagagcacg ttcaccgcta
      481 ctacaacgcg acgccgtatt ggggcatctg acgcgcgagg cgccgccgac agcatgatcc
      541 ggcaaggtgg gagccgcttt gccgaaaaag atcatgcgat tcgagagtaa cggggcagga
      601 tcgattcaac ctgaatcggt ctgccccagt cccgcgaccg cctggcgaca ggcggtcgtt
      661 ccttgttgac gcgagggcgc gcatgctcaa atgggctttg atctttcttg tcatctcgct
      721 ggttgccggc gcgctcggct tcacgggcat cgcgtcgggc gcggcgacgc tggcacgcat
      781 cctgttcggc atcttcctgg cgatcttcgt gatcctgctc gtcgtcgcgc tgctggtcgg
      841 cgaggcgctg ttctgacggt tgcgcccgct tccggtgcaa ccgtcgcggt gctacgactg
      901 gcgcattcgc gttgaggggc tcgcctgatg gtcacaagcg tgttcggacg gacttcgccg
      961 gtcgccctgg tgctgatcgg cttcgtggcg ggtgccctcg cggtcctcac cttccaccag
     1021 ctcacgatcc tgttgctctc gtatgtcggg ccgacgcagg gcaacgtcta ctcgatgcgc
     1081 ccgatcccgc ctttcggcgt gcccgccatg ctcaaccagg ccttctgggg cggcttgtgg
     1141 ggctgcgtgt tcgccctgct tgccgaccgc ttcccgcatc gctggccgct gtggctggcc
     1201 ggcctcgtgt tcggggcggt ggcgccgacg ctggtgggct ggttcgtggt ggcgccgctg
     1261 aagggcaatc ccgttgcgca aggtttcgag ccggcacgca tgtggcgggg tccgatcatc
     1321 aacggcatgt tcgggctggg aacggggatc ttcttcgacc tgttgcggcg cacgctcgga
     1381 cggccgcggt gggcgtgagg cgcgaccctg atcgggaagt cctgcccggg agatcaagtt
     1441 aagactgctg ccgcattgct ggaggttcga atgcgcaccg tcatctgcgt tgcggcgctt
     1501 gccgctctcg tctcgtcggc cgacgcgcag cagccgcggc cgcaaagcca gcagaagccg
     1561 ccggcccagg ccaaggcgcg gcagccgcct ccgccgccgc ccatcttccc gtgccggacc
     1621 gccgaggagg tctgctatct cggggtcgtc accggcgcca accaggtcac gatcctgttc
     1681 accaacaacc cgcaggtgga cgacgtcgaa agcaagccgg tcaacgtcct gtcaggcgat
     1741 tcgccggcgg cggcgggaag cggcacgccg ctcgatctcg gccagcatct cggccgcgtg
     1801 gtcatgctga ccggaacata tgacgcgcag gccgggttga cgaaggccga gcttgtcgaa
     1861 gtggcgagcc cgctcgtgtc gttgaccgtg aaggcgccgc tcctgatcga ggaggcgcag
     1921 gcgtctcaac agcgcggcgg caagcctcag ccccagggac ggccgaagcg ctagctcatg
     1981 atcaggtgag cgcgctttgc ggacgagatc gggtcttaga acgcgggggc ggccctggac
     2041 acggcacctg ctccgcgctt ggatgatggc gcgacggtta cggagggatt catgaaaggc
     2101 gcattattcg cggcacttct cggcgcgacg gctctggtcc ccttgcccct gctggcgcag
     2161 accagcgctc cggagcagcc ggcgcaggcg cctgccgctc cgccgccggc cgcgcagccc
     2221 gcgcctgcgc agcaggccgg cgccggaagc cgcgccccag ccaatctctg ccaggagctg
     2281 atcgcctacg cccgccaggc gtctgcgcca tccccggggg cagccgcggc cgctgctgcc
     2341 gctcaggcgc cccagccgac gccggcgcaa caggtcgcgc ccgcggcccc gccgcaagcg
     2401 cccggtgctg ccgccgcggc acagccgccg ggcaaggacg caccctcgca atccggcatc
     2461 cccgggccga tcccgcaggc gcagacgcaa ggcacgcccg gcccgcaggc cgccggccag
     2521 agcccggccg tgacgcagcc gcagaccccc gctgccgccc agcccggcgg gcaggctccg
     2581 cctccggcgc cggccgctgc tgccgccccg gccgcgcctc agccgcccaa gccgacggcc
     2641 gaacacgtcg ccaagctcga ggccgcggtg cagaacaatg acctcgctgc ctgccgcaac
     2701 tacggccagc agatgcgccg cgcgggcatg gtgatgccgt cgcccctgct cgcgctggcc
     2761 ggcctcgacc tcaagtatct gcagcaggcg cagcccccgg agccgccgca gcagccgccg
     2821 gcgccgcagc agtaagctgc cacgctccgt ctcgcgcttg cgtcaggatg cgagtccgct
     2881 tctcccgcaa gcgggagagg cggcaggcgt gacagggact attcgcgttt ctcgagactg
     2941 accctggcgt cggtgccgga gccctggatc ttcaccgcct gggcggagag ctcccgccac
     3001 gcggcctggg tgtaggcgcc gttgttgagg atggcgtcgg cgccgatggc gatgacggcg
     3061 agcagaagca gaaacctgat catggacggg ccctccttgt gcagggcaac gacgatcggc
     3121 tcggctgtgt tccgcggggt agcgggcacg gcgagacgat cacattgagc cgatcccgct
     3181 ctgcttttat tgggtcgcat gatctt
//
LOCUS       DATAIQ010000461         1966 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_393629, whole genome shotgun sequence.
ACCESSION   DATAIQ010000461 DATAIQ010000000
VERSION     DATAIQ010000461.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1966)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1966)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1966
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_393629"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..251
                     /locus_tag="VHN20_07650"
     CDS             <1..251
                     /locus_tag="VHN20_07650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012634371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF4142 domain-containing protein"
                     /protein_id="HEX2725678.1"
                     /translation="PTIPPDKADMMQSLQQARAGADFDRVYIQGQIQGHQELLQIQER
                     YLQANSRNREHMNVAKLARGHIKEHLAMLQDIQKELRG"
     gene            387..560
                     /locus_tag="VHN20_07655"
     CDS             387..560
                     /locus_tag="VHN20_07655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725679.1"
                     /translation="MGDLKKAETKRSGFGETASPKDKKLAENSKKNLDKKLDHALEET
                     FPTSDPVSVKITK"
     gene            complement(623..>1966)
                     /locus_tag="VHN20_07660"
     CDS             complement(623..>1966)
                     /locus_tag="VHN20_07660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012334305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX2725680.1"
                     /translation="MSQGETVRLHAFDLAPGDAARFRTDAVEALIAGGNTPANRARLV
                     AAMGSARGTATIGDAGLDETLEAIRAEMRRFAEGEVTPHAHDWHRANAYIPLEVIAHL
                     AELGVFGLTIPEAYGGMGLSKVAMCVVSEELSRAYIGVGSLGTRSEIAAELIMAGGTE
                     EQKQRFLPGLAAGDIIPTAVFTEPNTGSDLASLRTRAVRDGDVYRVHGNKTWITHPVR
                     ADLMTMLVRTDPDEPGHKGLSILLAEKPRGTDAEAFPVAGLTGGEIEVLGYRGMKEFE
                     LAFDGFSVPAGNLLGGVEGQGFKQLMQTFESARIQTAARAVGVAQSALDLGLRYAQER
                     IQFGKPLLAFPRVADKLAMMAAEIHLARQLTYFAGRAKDEGRRCDLEAGMAKLLAARI
                     AWAAADNAVQIHGGNGFALEYPVSRVLCDARILSIFEGAAEIQANVIARRLLEQQ"
BASE COUNT          352 a          652 c          657 g          305 t
ORIGIN      
        1 cgccgacgat accccctgac aaggccgaca tgatgcagtc gttgcagcag gcgagggccg
       61 gcgccgattt cgaccgcgtg tatatccagg gccagatcca gggccatcag gaactcctcc
      121 agatccagga gcgctacctc caggccaaca gccgcaaccg ggagcatatg aacgtcgcga
      181 agctggcccg gggccatatc aaggagcatc tggctatgct ccaggacatc cagaaggaac
      241 tccgcggctg aggccggccg gccctctccg caactggaag cggcctcggg cgctcccctt
      301 tacccctccc cggcacggga tcggatcgcg ctctgacgcg ttatcccttg ccggttccac
      361 cgggacgggg ccttgcggag gcaatgatgg gcgatttgaa gaaagctgag acgaaacggt
      421 cggggtttgg cgagaccgcc agcccgaagg acaagaagct ggcggaaaac tccaagaaga
      481 acctcgacaa gaagctcgat catgcgctcg aggagacgtt cccgaccagc gacccggttt
      541 ccgtgaagat cacgaaatag gcggttaagg ctccgccgcc gacagccgcg tcaggtccga
      601 tgccgatgcc cggctgacgc gcttactgct gctcgagcag acggcgggcg atgacgttgg
      661 cctggatctc ggcggcccct tcgaagatcg acaggatgcg cgcgtcgcac aggacgcggc
      721 tgaccggata ttcgagcgcg aagccgttac cgccatggat ctgcacggcg ttgtcggccg
      781 ccgcccaggc aatgcgtgct gcaagcagct tggccatgcc agcttccaga tcgcagcgcc
      841 tgccttcgtc cttggcgcgg ccagcgaaat acgtcagctg gcgcgcgaga tgaatttccg
      901 ccgccatcat ggcgagcttg tcggcgacgc gcgggaaggc gagcagcggc ttgccgaact
      961 ggatgcgttc ctgcgcgtat cgaagtccca gatcgagcgc cgattgcgcc acgccgacgg
     1021 cgcgggcagc ggtctggatg cgggccgact cgaaggtctg catcagctgc ttgaacccct
     1081 gcccttcgac gccgccgagc aggttgccgg ccgggacaga aaagccgtcg aaggccaact
     1141 cgaattcctt catgccgcga tagccgagca cctcgatctc accgcccgtc aggcccgcga
     1201 cgggaaacgc ttcggcatcc gtgccgcgcg gcttctcggc gagcaggatc gaaaggccct
     1261 tgtggccagg ctcatccggg tccgtgcgca ccagcatggt catcaggtcg gcgcgcaccg
     1321 gatgcgtgat ccaggttttg ttgccgtgaa cgcgataaac gtcgccgtcg cgcacggccc
     1381 gggtgcgcag cgaggcaagg tcggagccgg tattcggctc ggtgaacacc gcggtcggga
     1441 tgatgtcgcc cgcggcaagg cccggcagga aacgctgctt ctgctcctcg gtgccgcccg
     1501 ccatgatcag ctcggcggcg atctccgagc gcgtcccgag cgagccgaca ccgatatagg
     1561 cgcgcgacag ctcctcggac acgacgcaca tggcgacttt cgacaagccc atgccgccgt
     1621 atgcctcggg gatcgtgagc ccgaagacgc cgagctccgc aagatgcgcg atcacctcga
     1681 gcgggatgta ggcattggcg cggtgccagt cgtgcgcgtg cggcgtgacc tcgccctcgg
     1741 cgaagcggcg catctcggcc cggatggctt cgagggtctc gtcgagcccg gcatcgccga
     1801 tggtcgcggt gccccgagcg ctgcccattg cagcgacaag ccttgcacgg ttggcaggcg
     1861 tgttgccgcc cgcgatcagg gcctcgaccg catcggtgcg aaagcgggcg gcgtctccgg
     1921 gcgcgaggtc gaaggcatgc aggcgcacgg tctcgccctg gctcat
//
LOCUS       DATAIQ010000462         1860 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_195749, whole genome shotgun sequence.
ACCESSION   DATAIQ010000462 DATAIQ010000000
VERSION     DATAIQ010000462.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1860)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1860)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1860
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_195749"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1137
                     /locus_tag="VHN20_07665"
     CDS             <1..1137
                     /locus_tag="VHN20_07665"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020091783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004151 - dihydroorotase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HEX2725681.1"
                     /translation="HVVAPGLIDMRVFIGEPGAEHRETLKSASEAAAAGGVTTIVCMP
                     DTNPVIDDPAIVDFVLRRARDTAVVNIRPAAALTKGLEGREMAEIGLLTGAGAVAFTD
                     GAHSVTNAQVMRRALTYARDVGALIMHHVQDPDLVGDGVVNEGEFASRLGLLGIPREA
                     ETIMLERDSRLVRLTQSRYHAALISCADSVEIVRIAKDRGLPVSCGVSINNLTLNEND
                     IGDYRTFLKLAPPLRSEDERQAVIEGLASGAIDVIVSDHNPQDVETKRLPFAEAADGA
                     VGLETLLSAALRLVHAGQLSLPKVLRALTTRPADILGLPCGRLAVGAPADLIVFDPDA
                     PYVLDKRDLRSRSKNTPFDEARLQGRVLTTLVGGRVVFDDLKAR"
     gene            1265..>1860
                     /gene="plsY"
                     /locus_tag="VHN20_07670"
     CDS             1265..>1860
                     /gene="plsY"
                     /locus_tag="VHN20_07670"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019403546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0008374 - O-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006654 - phosphatidic acid biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HEX2725682.1"
                     /translation="MPTSMNWSLDAPYFVAALVFGYLLGSIPFGLIFTRLAGLGDVRK
                     IGSGNIGATNVLRTGRKGLAAATLLADALKGTLAVILAGMWGPNTAILAALGAFLGHL
                     FPVWLGFKGGKGVATFLGCLLGLRPVAALGFAVVWLALAAAMRFSSLSALAASAATPA
                     RLWYLGDRQAAELFVVLSLLLWWKHRDNIRRLLAGTEGR"
BASE COUNT          262 a          652 c          637 g          309 t
ORIGIN      
        1 cacgtggtgg cgccgggcct gatcgacatg cgcgtgttca tcggcgagcc cggcgccgag
       61 catcgcgaga cgctcaagag cgccagcgag gcggcagccg caggcggcgt caccaccatc
      121 gtgtgcatgc ccgacaccaa cccggtgatc gacgatccgg cgatcgtcga tttcgtgctg
      181 cgccgggcgc gcgacacggc cgtcgtcaac atccgtcccg cggccgccct caccaagggc
      241 ctcgaagggc gcgagatggc cgagatcggg ctgctcacgg gcgcgggcgc ggttgcgttc
      301 accgacggcg cgcattcggt gaccaatgcg caggtcatgc gccgggcgct gacctatgcg
      361 cgcgacgtcg gggcgctgat catgcatcac gtccaggatc ccgacctcgt cggcgacggc
      421 gtcgtcaacg aaggcgaatt cgcaagccgc ctcggcctgc tcggcatccc gcgcgaggcc
      481 gagacgatca tgctcgagcg cgacagccgc ctcgtccgcc tgacgcagag ccgctaccac
      541 gccgcgctga tctcgtgcgc cgactcggtc gagatcgtgc gcatcgcgaa ggacaggggc
      601 cttccggtca gttgcggcgt gtcgatcaac aatctgacgc tcaacgagaa cgacatcggc
      661 gattaccgca ccttcctgaa gctggcgccc cctttgcgca gcgaagacga gcgtcaggcg
      721 gtgatcgaag ggctggccag cggcgccatc gacgtgatcg tgtccgacca caacccgcag
      781 gatgtcgaga ccaagcgcct gccgttcgca gaggccgcgg acggcgccgt cggcctcgag
      841 acgctgctgt cggcggcgct gcgcctcgtg catgccggcc agctgtccct gccgaaggtt
      901 ttgcgcgcgc tcaccacccg gcctgcggac atcctcggcc tgccgtgcgg gcgcctggcc
      961 gtgggcgcgc cggccgatct gatcgtgttc gatcccgatg cgccatatgt gctcgacaag
     1021 cgcgacctgc gctcgcgctc gaagaacacg ccgttcgacg aggcgcggct gcaggggcgg
     1081 gtgctgacga ccctggtcgg cggacgcgtt gtcttcgacg atctcaaggc gcgctgatac
     1141 cacacgcgat gccgccgaag cgcgccggcc acgacatcac ggctgattgt cgggcgcgcc
     1201 cgctctgaat agaaccaggc cgttgaggtc ggaagtcgcc gttcgccggc gttgaggtaa
     1261 gcgcatgccc acttcgatga actggtcgct cgatgcgccg tatttcgtgg ccgcgctcgt
     1321 ctttggttac ctgctcggct cgattccgtt cggcctcatc ttcacccggc tcgcgggcct
     1381 cggcgacgtg cgcaagatcg gctccggcaa catcggcgcg acgaacgtcc tgcgcacggg
     1441 ccgcaagggc ctcgcggcgg cgacgctcct cgccgacgcg ctgaaaggca cgctcgccgt
     1501 gatcctcgcc gggatgtggg gacccaacac cgcgatcctc gccgcgctcg gcgcctttct
     1561 cggtcatctc tttcccgtgt ggctcggttt caagggcggg aagggcgtcg cgaccttcct
     1621 gggctgcctg ctcgggctgc ggccggtcgc ggcgcttggc ttcgcggtcg tgtggctggc
     1681 gctcgccgct gcgatgcgct tttcgtcgct gtccgcgctc gccgccagcg ccgcgacgcc
     1741 ggcgcggctg tggtatctcg gcgaccggca ggcggcggag cttttcgtcg tgctgagcct
     1801 gctcttatgg tggaagcacc gcgacaacat cagacggctc cttgctggga ccgagggccg
//
LOCUS       DATAIQ010000463         2966 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_195771, whole genome shotgun sequence.
ACCESSION   DATAIQ010000463 DATAIQ010000000
VERSION     DATAIQ010000463.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2966)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2966)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2966
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_195771"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            120..377
                     /locus_tag="VHN20_07675"
     CDS             120..377
                     /locus_tag="VHN20_07675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family transcriptional regulator"
                     /protein_id="HEX2725683.1"
                     /translation="MPMDPREIARLIKEGIPDAQVEIKDLAGDGDHYAATVTSPAFKG
                     KSRVQQHQMVYSALQGRMGGALHALALTTVATDNQLNNPAS"
     gene            401..736
                     /gene="grxD"
                     /locus_tag="VHN20_07680"
     CDS             401..736
                     /gene="grxD"
                     /locus_tag="VHN20_07680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007606093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Grx4 family monothiol glutaredoxin"
                     /protein_id="HEX2725684.1"
                     /translation="MADINQVIDDEVKSNDVVLFMKGTPQFPMCGFSGQVVQILNYLG
                     VPYKGVNVLENEDIRQGIKEYSNWPTIPQLYVKGEFIGGCDITREMFQAGELQQVFAD
                     KGVVVKQTA"
     gene            917..1948
                     /locus_tag="VHN20_07685"
     CDS             917..1948
                     /locus_tag="VHN20_07685"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEX2725685.1"
                     /translation="MIRAGTGLASAAGLVAALMMLGAASVSAQSAAEPFAGKNVTMVI
                     GFGTGGGYDLWGRTVARHIGKHLPGKPTVVPQNMPGAGSLLAANHIYNVAPKDGSVLG
                     IIARDAALAELAGLQGARFEATKLSWIGSPAVETNVCIAYNTAKVKTAKDLLDQELIL
                     GNTGPGTGTYTYPKALAGILGMKFKLISGFPSSSDVFLAMQRGEVEGICESYDSVIGK
                     QPDWIKNRTVNVLFQAGAEPSPHLKDVPFILDLAKTEDEKQALRFLYAGQGIGRPFVA
                     PPNLPAERLKMLRDAFNATMKDAEFIAEVTKLKLEIEPQTGEQLEKLIKEIYATPKPV
                     VEKVGNLVK"
     gene            complement(1963..2202)
                     /locus_tag="VHN20_07690"
     CDS             complement(1963..2202)
                     /locus_tag="VHN20_07690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725686.1"
                     /translation="MKTVVARQPHTGKVNGQAFGDSPRQFRMHRVVEARAKLRRGPAL
                     DVANAYGLDVPNTAFPDLIRDQAGRQIERDQFKRN"
     gene            2783..>2966
                     /locus_tag="VHN20_07695"
     CDS             2783..>2966
                     /locus_tag="VHN20_07695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725687.1"
                     /translation="MQSNLSNRIGLGFLAGLLAFAAAPALPVAAQAQDMDRPVLDFGV
                     KREPDAAYAAAEVPAAL"
BASE COUNT          558 a          951 c          957 g          500 t
ORIGIN      
        1 ggggctttgt tgaccttgcc gggggaggaa gccatatcgg tcgaggagtt gaaggcagcc
       61 cacgaatcct ggctgccgga ctacatggcc ggccaggcgg cctgagggag acccaaagaa
      121 tgccgatgga tccccgcgag atcgcgaggc tgatcaagga gggcatcccc gacgcccagg
      181 tcgagatcaa ggatctcgcc ggggacggcg accattacgc cgccaccgtc acctcgccgg
      241 ccttcaaggg caagtcgcgc gtgcagcagc accagatggt ctattccgcg ctgcaaggcc
      301 gcatgggtgg cgccctgcac gcccttgcgc tgaccacggt cgcgacggac aatcagctca
      361 acaacccggc gtcgtgaccg ccgggccaca ggagtaggac atggccgata tcaaccaggt
      421 catcgacgac gaagtgaagt cgaatgacgt cgtgctgttc atgaagggca cgccgcaatt
      481 cccgatgtgc ggcttctccg ggcaggtcgt gcagatcctc aactatctcg gcgtccccta
      541 caaaggcgtc aacgtcctcg agaacgaaga catccgccag ggcatcaagg aatattcgaa
      601 ctggccgacc attccgcagc tttacgtcaa gggcgagttc atcggcggtt gcgacatcac
      661 ccgcgagatg ttccaggccg gcgagctgca gcaggttttc gccgacaaag gcgtcgtcgt
      721 gaagcagacc gcgtaaggcg cgtcggcagc accgaaggaa ggggcgctca ggcgcccttt
      781 tttattggct cccaggggct tggaggcagg caggagcgcc cttaaccctg cccgcggcgc
      841 gattgtggac cggcagaata gttatgtaat gtgcgcgcca agccgggctg ccggcggaag
      901 cacagggaga aacgatatga tcagggcagg gaccgggctc gcatccgccg ccgggctcgt
      961 cgcggcgctg atgatgctgg gcgcagcgtc tgtttcggcg cagtcggccg ccgagccttt
     1021 cgcgggcaag aacgtgacca tggtgatcgg cttcggcaca ggcgggggct acgacctgtg
     1081 gggccgcacg gtcgcccggc acatcggcaa gcacctgccc ggcaagccga cggttgtccc
     1141 gcagaacatg ccgggcgccg gcagcctgct cgccgccaac cacatctaca atgtggcgcc
     1201 caaggatggc tccgtgctcg gcatcatcgc ccgcgacgcg gcgctcgccg agctcgccgg
     1261 cctgcaaggc gcgcgcttcg aggccaccaa gctctcctgg atcggaagcc cggccgtcga
     1321 gaccaatgtc tgcatcgcct acaacacggc caaggtcaaa acggccaagg acctgttgga
     1381 ccaggagctc atcctcggca acaccgggcc gggcaccggc acctatacct atcccaaggc
     1441 actcgccggc atcctcggca tgaagttcaa gctgatcagt ggcttcccct cgtcatccga
     1501 cgtgttcctc gccatgcagc ggggtgaggt cgagggcatc tgcgaaagct acgacagcgt
     1561 catcggcaag cagcccgact ggatcaagaa ccgcaccgtc aacgtgctgt tccaggccgg
     1621 cgccgagccg agcccgcatc tcaaggacgt gccgttcatc ctcgatctcg ccaagaccga
     1681 ggatgagaag caggcgctcc gtttcctgta tgcagggcag gggatcggcc gcccattcgt
     1741 ggcgccgccc aacctgccgg cggaacggct caagatgctg cgcgacgcct tcaacgcaac
     1801 gatgaaggac gcggagttca tcgccgaggt cacgaagctg aagctcgaga tcgagccgca
     1861 gaccggcgag cagctcgaaa agctgatcaa ggaaatctac gcaacgccca agccggtcgt
     1921 cgagaaggtc ggcaacctgg tcaagtgagt tcaagggcgg gatcagttcc gcttgaattg
     1981 atcccgctca atttgtcgac ccgcctgatc ccggatcagg tccgggaaag ctgtattcgg
     2041 cacatcgagt ccgtaggcgt tcgccacatc aagcgcgggc ccgcgccgca gcttggcgcg
     2101 tgcttcgacg acccggtgca tgcgaaattg ccgtggagaa tcgccgaaag cctggccgtt
     2161 gaccttgccg gtgtgtggct gccgcgccac aacggtcttc acctagacgg tacggtcccg
     2221 aatactgccg cgcttggatg attacggacg gctgtgtggc ttttatgcac tagagcacag
     2281 cgcgcatccc acgtaggttt gcgacgaccc aattctaggt cgtccgaaag ctatccgccg
     2341 caccatttag ggggcttaac catgaagaag ttcgttattc tcgccgttgc aggtctcgcc
     2401 gtgttgagcg ccgcggcttg cgcaggcgtt ggcaagggca agggcaaggc cccggctccg
     2461 gctccggtcg tttcccgcgc cggctaagac tgcgatatca gaacggtatc agaaagggcc
     2521 ggctcacgcc ggcccttttc ctttcagacc atgcgctcaa agcgtgagtc ggggcggcgg
     2581 cgcgtggcgc tgcggtctgc ccgcgagccg cgtgacgcga ccgcgttgca atcgtgccgc
     2641 actgcagcgg attcgcgcgg aagccgtccg cgacgccttc tatcacggtt aattcttctc
     2701 caatgtcacg ctggacgttc ggtgcacggc gcctgagtcc ggtccgccgg gcttacgtcc
     2761 gcatgggttt caggaggtga aggtgcagtc caatctgagc aacaggatcg gcctcggctt
     2821 cctcgcgggc ctgcttgcct tcgcagccgc gccggcgctg ccggtcgctg cacaggcgca
     2881 ggacatggat cggccggtgc tcgatttcgg cgtcaagcgc gagcccgacg cggcctatgc
     2941 agcggccgag gttccggcgg cgctgc
//
LOCUS       DATAIQ010000464         4115 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_242217, whole genome shotgun sequence.
ACCESSION   DATAIQ010000464 DATAIQ010000000
VERSION     DATAIQ010000464.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4115)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4115)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4115
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_242217"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..198)
                     /locus_tag="VHN20_07700"
     CDS             complement(<1..198)
                     /locus_tag="VHN20_07700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018453699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725688.1"
                     /translation="MRNSLTTAVTAALVSVAAVAALAFLSSEFRKPESTRPVRPVWTE
                     AHWPFPLDPWGKGKAFRCRTQD"
     gene            complement(241..1842)
                     /locus_tag="VHN20_07705"
     CDS             complement(241..1842)
                     /locus_tag="VHN20_07705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018453700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725689.1"
                     /translation="MSARALRTASLVALTALGSASIQAPAAAQDGGDEQFGRVHFQTS
                     CNEVAQRRFDRAMRYQHSFWYRPAKEIFQETLKADPDCAMAYWGIALSLLLNPHFPAP
                     KENVAEGLAALEKAKAMGAKTQRERDYIDGLLAFYAGDEQRPFGQRVQSYLGAAEAIA
                     ARYRDDDEAQIAYAITLNVAASPNDKSYGNQLKGAAILEPIFQRQPRHPGVAHYLIHL
                     YDYPPIAEKGLGAAQRYAEIAPAAPHAQHMPSHIFTRVGYWKDSIAANSRSAVAAKEG
                     KELHDQLHAMDYLVYAHLQLAQDKEARAVVDEMVAAKGYNPAVRTGPYAVAASQARYM
                     VERGDWRGAAALQVDPTRFPYVDAITHFARALGAARSGDPDAARADVVKLTELHDKLQ
                     QEKDAYWSEIVDIQRQVATAWLLNAEGKHTEALDVMRAAADAEDKTEKSIVTPGPLAP
                     ARELYGTMLLERGMAREALAAFEGTLAKEPNRLGASLGAAQAAEKAGEPARARQHYAK
                     LVEMVPTSDMARQDLAAARAYLARN"
     gene            complement(1964..3256)
                     /locus_tag="VHN20_07710"
     CDS             complement(1964..3256)
                     /locus_tag="VHN20_07710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012045938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug effflux MFS transporter"
                     /protein_id="HEX2725690.1"
                     /translation="MHQQIAPNGAVETRIGFKEFVAMVAALMALNALAIDIMLPGLQE
                     IGNALDVADENRRQAVLTAYLWAFGVGQLLVGSVSDRFGRKPVLLGGLALYIVAAALC
                     AAATSFEALLVARALQGLASAAPRVVVTAVVRDCYGGRRMASVMSLAMMAFISVPVLA
                     PSIGQLVLLFSSWREIFGLLTLYGLVLTAWTWRRLPETLPPDRRRPASPRGVALAIRK
                     VLTTRQTIGYTLATGMMFGANFGFIVTAQQIFVDVFGLGVYFPLAFAAVAVTMALSSF
                     INSRLVVRLGMRRISHGAVVLFTALSGTLLALAAAGALKLWMFMLLIAGIMFLLGMVF
                     SNFNALAMEPQAGVAGTASSLTGSITTVMAASLGHVTGQAYDGTAVPLGTSYLVLGLA
                     TLLIILVTERGRLFDRARTSAPGSAARSAPPRLDGGAE"
     gene            complement(3860..>4115)
                     /locus_tag="VHN20_07715"
     CDS             complement(3860..>4115)
                     /locus_tag="VHN20_07715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012252956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725691.1"
                     /translation="VILTGLPRGAWAEPQKRRWAERHFPGVEVITTTAALKREHCRPG
                     DALVDDRDKYRNLWERAGGIFIHHRSAAASIKRLREHGFI"
BASE COUNT          640 a         1393 c         1431 g          651 t
ORIGIN      
        1 gtcctgcgtt ctgcagcgga acgccttgcc tttgccccag gggtcgagcg ggaatggcca
       61 gtgtgcctcc gtccacaccg gccgcaccgg gcgtgtcgat tcgggcttcc ggaattcgct
      121 ggagaggaat gccaatgctg cgaccgctgc gacggacacg agcgcagcgg tcacggctgt
      181 ggtgagcgag ttgcgcatga ggcgcattcc gcgaactcgg cttgccgcga gttcctgccg
      241 ttagttcctg gccaggtatg cccgtgcggc ggccaggtcc tgccgggcca tgtcgctcgt
      301 cgggaccatc tcgacgagct tggcatagtg ctggcgcgcc ctcgccggct cgccggcctt
      361 ctcggcggct tgcgccgccc cgaggctggc tccgaggcgg ttcggctcct tcgccagcgt
      421 accctcgaag gcggccagcg cctcgcgcgc catgccccgc tcgagcagca tcgtcccgta
      481 gagctcgcgg gcgggcgcga gcggcccggg cgtcacgatc gacttctcgg tcttgtcctc
      541 cgcatcggcc gccgcccgca tcacgtcgag cgcttcggtg tgcttgccct cggcattcag
      601 aagccaggcc gtcgcgacct gcctctggat atcgacgatc tcgctccagt aggcgtcctt
      661 ctcctgctgc agcttgtcgt gcagctcggt gagtttgacg acgtcggcgc gggccgcatc
      721 cggatctccg gagcgcgccg ccccgagcgc ccgggcgaag tgggtgatgg cgtcgacata
      781 cgggaacctg gtcggatcga cctgcagcgc ggcggcgccg cgccagtcgc cgcgttcgac
      841 catgtagcgc gcctggctgg cggcgaccgc atagggtcct gtgcgcaccg cgggattgta
      901 ccccttggcc gcaaccatct cgtcgacgac ggcgcgcgcc tccttgtcct gcgcgagctg
      961 cagatgggca tagacgagat aatccatggc gtgcagttga tcgtgaagct ccttgccttc
     1021 cttggccgcg accgccgagc ggctgttcgc ggcgatcgaa tccttccagt agccgacgcg
     1081 cgtgaagatg tgcgacggca tgtgctgcgc atgcggcgcc gcgggcgcga tctcggcata
     1141 gcgctgggcg gcgccgaggc ccttctcggc gatcggtgga tagtcgtaga gatggatcag
     1201 gtagtgggcg acgccgggat gccgcggttg ccgctggaag atgggctcca gaatggcggc
     1261 gcccttcagc tggttgccgt agctcttgtc gttcggcgag gcggcgacgt tcagcgtgat
     1321 cgcgtaggcg atctgcgcct cgtcgtcgtc gcgataacgc gccgcgatcg cctcggccgc
     1381 gccgagatag ctctgcacgc gctggccgaa cgggcgctgc tcgtcgcctg cgtagaacgc
     1441 gagaaggccg tcgatataat cgcgctcgcg ctgcgtcttg gcgcccatcg ccttggcctt
     1501 ttccagcgca gcgaggcctt cggcgacgtt ctccttcggc gccgggaaat gcgggttgag
     1561 caggaggctg agcgcgattc cccaataggc catcgcgcaa tcgggatccg ccttgagcgt
     1621 ttcctggaag atctcctttg ccggccggta ccagaaggag tgctgatagc gcatcgcgcg
     1681 gtcgaagcgg cgttgcgcca cctcgttgca cgacgtttgg aaatggactc tgccgaactg
     1741 ctcgtcgccg ccgtcctggg ccgcggcggg cgcctggatc gatgcagaac caagggcagt
     1801 taaggcgaca agcgaggcgg ttctcaaggc acgcgcggac atcggctcct ccgtaagagc
     1861 gtcatccatc ccgaagcgtt gtcttgtggt gggcggccgg cacggctcgc cgatgatgct
     1921 attgccgtgc tgttgcacgg gccgcgatcg gcgaagcctc cgcttattcg gcgccgccgt
     1981 caagccgggg cggggcgctg cgcgccgcag accccggggc gctcgtccgg gcgcggtcga
     2041 agaggcggcc gcgttccgtc acgaggatga tcagcagcgt cgccagcccg agcaccagat
     2101 agctcgtccc gagcggcacg gcggtgccgt catacgcctg gccggtgaca tggccgagcg
     2161 atgccgccat caccgtcgtg atggagccgg tcagcgacga cgcggtgccg gcgacgcctg
     2221 cctgcggctc catcgccagg gcgttgaaat tcgagaagac catgccgagc aggaacatga
     2281 tgccggcgat cagaagcatg aacatccaca gcttcagcgc gccggcagcg gccagggcga
     2341 gcagcgtccc ggacagggcc gtgaacagca ccacggcgcc atgcgagatg cggcgcatgc
     2401 cgaggcgcac gacgagccgc gagttgatga acgacgacag tgccatggtc accgccaccg
     2461 ccgcgaaggc gagcgggaaa tagacgccga ggccgaacac gtcgacgaag atctgctggg
     2521 ccgtgacgat gaatccgaaa ttggcgccga acatcatgcc cgtggcgagc gtgtagccga
     2581 tcgtctgccg cgtcgtgagc acctttcgga ttgccaaggc gacgccgcgc ggcgacgccg
     2641 gccgccgcct gtcgggaggc aaggtctccg gcaggcgccg ccacgtccaa gccgtcagca
     2701 cgagcccgta aagggtcagg aggccaaaaa tctcgcgcca ggaactgaac agcagaacca
     2761 gctgaccgat cgacggcgcc agcacgggaa ccgaaatgaa cgccatcatg gcgagcgaca
     2821 tgacgctcgc catgcgtcgc ccgccgtagc agtcgcgcac cactgcggtc acgacgacgc
     2881 gcggcgccgc cgacgcgagc ccctggaggg cccgcgcgac caggagcgcc tcgaagctcg
     2941 tcgccgccgc gcagagcgcg gcggcgacga tgtagagcgc gagaccgccg agcagcacgg
     3001 gctttcgtcc gaacctgtcc gataccgatc cgaccagcag ctgaccgacg ccgaaagccc
     3061 acagatacgc cgtgaggacg gcctggcgtc ggttctcgtc ggcgacgtcg agggcgttgc
     3121 cgatctcctg gagcccgggc agcatgatgt cgatggcgag ggcgttcagc gccatcagcg
     3181 ccgcgaccat ggcgacgaac tccttgaagc cgatccgggt ctcgactgcg ccgttcggcg
     3241 cgatctgctg gtgcatgttc atgattgtgg cggcccggct gacagggaga aagcccaacc
     3301 cgcgccggcg gcccggggtt tcaatgcggt ccgcaaagac aacccgaggc gacaatctgt
     3361 tgccgccgga cgcgcccgac ttgcggacag gcctgaaacc gccgtggccc tgctgggttt
     3421 ttgctgtgac cttcacgcat atccgatcgc gcgggaggcg ggagcggtga tgagcgtggt
     3481 cggatggttg ctcgatgagg ccgaccgtgc cgacctgctg cgccgcttcg ctccggccta
     3541 tccggacgtc gtcgcgcacc acgtcacgct gcaggcgcac gcgccgcgca acgcgcccct
     3601 gccggccgcg caagccggcg agatcgtcgg cgtggccgac gacggccgcg gcgtcgaggc
     3661 cctcgtggtc cgcatcgacg gcacgaccgc ccggcccgat ggctccacga accacgtcac
     3721 gtggtcgctc gaccggagcc gcggacgcaa gccggtcgac agcaacgacg tgatcagacg
     3781 ccatggctgg agcgtgcgcg cccatcccga ttcgcctgaa ccccgcccgc ttctgagccg
     3841 gcggcgaatc gatcccgctc tagatgaagc cgtgctcgcg caggcgtttg atggaggcgg
     3901 cggcgctgcg gtgatggatg aagatgccgc cggcccgttc ccacagattg cggtatttgt
     3961 cgcgatcgtc gacgagcgcg tcgccggggc ggcaatgctc gcgcttcagc gccgccgtcg
     4021 tcgtgatcac ttcgacgccc gggaagtgcc gctcggccca gcggcgcttt tgcggctcgg
     4081 cccaggcgcc gcgcggcagc ccggtcagga tgacc
//
LOCUS       DATAIQ010000465         1716 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_117478, whole genome shotgun sequence.
ACCESSION   DATAIQ010000465 DATAIQ010000000
VERSION     DATAIQ010000465.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1716)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1716)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1716
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_117478"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..213)
                     /locus_tag="VHN20_07720"
     CDS             complement(<1..213)
                     /locus_tag="VHN20_07720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725692.1"
                     /translation="MLLLREARAQRGEIVRASDVAHRRAEAALDGRREFVAALRDCLE
                     RPNPLFRGAGQLCLGPADTGFEARHQV"
     gene            262..>1716
                     /locus_tag="VHN20_07725"
     CDS             262..>1716
                     /locus_tag="VHN20_07725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725693.1"
                     /translation="MREACDAVTKGAETSLGQSATDLEKNLRTSKQGMECAIPKRADE
                     AASREAPAWKRVIAVLLVILVIIIMIVVTVVTFGAGGIIAGIIVGAIVGAVTSAMLTM
                     ASNLWNNQSVMRGVARAALIGAITGAIGGGLGAWMGGALQAANITSRAVILAANLGLA
                     AAINVGSQFVLGGFSFKNFSFSQLGLTLLVTLATFGIGAKFGGRIQVGGGGARPPTPG
                     APPPSEPPAPAPAPAPTPAGPPRLTVIKGGGGGPSAAPGRTPVSAPSGGGGGGPRTIG
                     TSALKYEPMPTPTPAPTAAPAPRHLALAPSPTPTPVTAPPTPAVAPPTPAPVTPPTPS
                     IAATSTAVGITAAVVSAAQSSTGQQPQPIVTLWLPPEKSVYLSLYRSYLRLLQHRVGR
                     DRATNQRAAWDRALDPRRAGDMSLEAFCRGRSMEDVLRRGQQLSHRDILRPRWTAAQF
                     WPDMEVDHRIEMQVTTIGGEAQFDQPWNYELLDDL"
BASE COUNT          289 a          609 c          568 g          250 t
ORIGIN      
        1 aacttgatgg cgggcctcga atccggtgtc ggcggggccg agacacagct ggccggctcc
       61 gcggaacagg gggttgggtc gctcgaggca gtcgcgcaga gcagcgacga actcgcgacg
      121 accatccagg gcggcttcgg cacggcgatg agcaacatcg ctggcacgga caatttcgcc
      181 acgctgcgca cgggcttcac gcaacagcag caacagaccg ccgccggcgg cgccaaggcg
      241 ctcgagaaag cggtcggcgg catgcgcgag gcctgcgacg cggtgacgaa aggcgccgag
      301 acgtcgctgg gccagtccgc gaccgatctc gagaagaacc tgcgcacctc caagcaagga
      361 atggaatgcg ccatcccgaa gcgcgccgac gaagccgcat cgcgcgaagc gccggcatgg
      421 aagcgcgtca ttgccgtcct tctcgtgatc ctggtcatca tcatcatgat cgtggtgacc
      481 gtcgtcacct tcggtgcggg cggcatcatc gccggcatca ttgtcggcgc catcgtcggt
      541 gccgtcacct ccgccatgct caccatggcg agcaacctgt ggaacaacca gagcgtcatg
      601 aggggtgtcg cgagggcggc gctcatcggc gccatcacgg gcgcgatcgg cggcgggctt
      661 ggggcgtgga tgggcggcgc actgcaggcg gccaacatca cgtcgcgagc cgttatcctg
      721 gcggcgaacc tggggctggc ggccgccatc aacgtcggtt cccagttcgt cctgggcggc
      781 ttctcattca agaacttctc gttctcgcag ctcggactga cattgctcgt gacgctggcg
      841 acgttcggca tcggggcgaa gttcggcggc cgcattcagg tcggcggcgg cggggcgagg
      901 ccgcccacgc cgggcgcgcc gccgccatcc gaaccgcctg cgcccgcccc ggcgcctgcg
      961 ccgaccccgg ccggaccgcc gcggcttacc gtcatcaaag gtggcggcgg cggtccttca
     1021 gccgctccag gccgcacacc agtctccgcg ccaagcggag gcggcggcgg tggcccccgc
     1081 acaatcggaa cgtctgcgct caaatacgag ccgatgccaa caccgacgcc ggccccaacg
     1141 gccgcgcccg cgccgcgcca cctcgctctc gcgccctcgc ccacgcctac gcccgtcacg
     1201 gctcctccga cgccggcggt agcaccccca acgccggcac ccgtgacgcc accgaccccg
     1261 tccatagcgg ccacgtccac cgcggtcggc atcaccgccg ccgtcgtgtc cgccgcccag
     1321 tcgagtacag gtcaacagcc gcaaccgatc gtgacgctgt ggctgcctcc ggaaaaatcg
     1381 gtttatctaa gtctgtaccg cagctacctg cgactgttgc aacatcgcgt gggtcgggat
     1441 cgcgccacga atcagcgtgc agcatgggac cgagcgctcg acccgcggcg cgcaggcgac
     1501 atgtcgctgg aagctttctg tcgtgggcgc tccatggagg acgtgctgcg ccgagggcag
     1561 caactctcgc atcgcgatat cctgcggccc cggtggacgg cggcacaatt ctggcccgac
     1621 atggaggtcg accaccgcat cgagatgcag gtcacaacga ttggcggcga ggcccaattc
     1681 gatcagccgt ggaactatga gctgcttgat gatctg
//
LOCUS       DATAIQ010000466         6320 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_24608, whole genome shotgun sequence.
ACCESSION   DATAIQ010000466 DATAIQ010000000
VERSION     DATAIQ010000466.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 6320)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6320)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6320
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_24608"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1496
                     /gene="tsaE"
                     /locus_tag="VHN20_07730"
     CDS             <1..1496
                     /gene="tsaE"
                     /locus_tag="VHN20_07730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012330473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HEX2725694.1"
                     /translation="DLAATTSLAAFIAAQVQPGDLVTLSGDLGAGKTALARAIVRVLA
                     MDPELEVPSPTFTLMQTYESRRGPIVHADFYRIAGPGELIELGWDEVADTSILLVEWP
                     ERAAAALNPARLDVHLELAPADGPDMRIATLRASGSLASRFAQARALRGLLYDAGWAD
                     GRRIAMQGDASTRAYERLVKPSGETAVLMISPPRPDGPPVRRGKPYSAIARLAESVHA
                     FVAMDKGLRALGFSAPHIYGEDLGAGLLVIEDLGNEPVVGPDGPIPERYAEATRLLAR
                     LHGTMLPNILPVAEGHDHVLPPYDLDALLIEVELLVDWYCPHVAGLDPSGSVRGEFVN
                     LWREAVAEILRGPTTWTLRDYHSPNLLWLPSRSGVARVGLLDFQDAVLGHPAYDLVSL
                     LQDARVTVPPDLEIKLLGLYARERQTADAAFDMSAFARAYAILGAQRATKILGIFARL
                     DRRDGKPHYLAHLPRIETYLARNLAHGAVAKLRTWYDTHLPRLAGNA"
     gene            1514..2248
                     /locus_tag="VHN20_07735"
     CDS             1514..2248
                     /locus_tag="VHN20_07735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019906929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HEX2725695.1"
                     /translation="MSNDPSSPLTTAMVLAAGLGKRMRPVTATIPKPLVEVGGRALID
                     HALDRLAAAGTRRAVVNVHYLADLVEAHVRRRQQPAIVISDERGELLETGGGVRKALP
                     LIGSAPFVLLNSDSLWIEGAEANLPRLRQAWAEARMDILLLVAAVEQTLGYEGFGDFA
                     MEPDGRLRRRGEEQTAPFVYAGVAILRPQLFVDTPDGAFSLNLLFDRAIAAGRLYGLR
                     LDGQWLHVGTPESIAAAEERLVASMR"
     gene            2255..5416
                     /gene="addB"
                     /locus_tag="VHN20_07740"
     CDS             2255..5416
                     /gene="addB"
                     /locus_tag="VHN20_07740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020090798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000724 - double-strand break repair via
                     homologous recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="double-strand break repair protein AddB"
                     /protein_id="HEX2725696.1"
                     /translation="MASLDPRVFTIPSGAPFLPTLADALTRGRILDGLGDAASLARAT
                     IYLPTRRAARALATLLAAHGDGRAQLLPRIVPLGEADGAEFELAGGGPDDAVFEGAEA
                     LAPPIAPLERRLILTRLIQRWAETVDRARLRLEADAPLLVPSSPADAVGLAGDLERLM
                     DAFTTEGIPWEQLANAVEIDFSEYFGLTLDFVRIATEYWPKMLAEREASDPASRRSAL
                     IHAEARRLLRDRPAAPVVAAGSTGSMPATAALLNAIARLPNGAVVLPGLDTDLDEASW
                     ASIGGLETDDSDPVHGHPQAMLRRLLDGYFKIPRAAVQVLDPSAGPMAARSRVLSEAL
                     RPADTTDLWGTLPAGSRADLARQGCEGIKLVEAADERDEALAAAIALRETLASPGRTA
                     VLVTPDRGLAKRVAAELARWDIAVEDSAGVPLSETPAGLLARLAADAAALDFHPTRLL
                     ALLAHPQVRLGWPRAVLERAASALEIGVLRGPAPAPGLVGLQHALAGSRATLSRHTPR
                     PRRRLSADDWKLAAELVARLADAFAGFTAETLGEAAVDLVAVTHAHRRTVDALSASPD
                     ESEPAEGEDGSAEALAALFDDLSLSETGGVHGRFAEYPAFFTTLARERVIPAASRGST
                     HRRIRILGLLEARLLSADRVVLGGLDEAVWPPRTETDAFLNRPMRARVGLSPPERRIG
                     QTAHDFVQALGTSDVVITRAQKRDGAPTVPSRFLQRMKAFTGEAIWRDVAAAGERYLQ
                     LARALETPKPARPLPRPAPKPDPALFPRTLSVTEIETLVRDPYSIFARHVLKLDALEP
                     IAGTPSAAERGTIIHDVLGSFATDHADELPPHALEDLMQRGEDAFGRIADAFPELYAA
                     WWPRFVRLAAEFVVWEDARRPGLARIHPELSGSLPIALPDGSTFTLRARADRIEARRD
                     GGYSIIDFKTGTPPGVKEVFAGFSPQLTLEAAMLMQGAFKNVPAAPDTPDLVYVHTSG
                     GRKPLKPREIKPPPGETRSVADIVEQHRDRFTHLLARYVSGETGYLSRPYPKYAKRFS
                     DYDHLARVKEWSLTNGGDENGLE"
     gene            5416..>6320
                     /locus_tag="VHN20_07745"
     CDS             5416..>6320
                     /locus_tag="VHN20_07745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HEX2725697.1"
                     /translation="MGELVIGPDTKDAQRRAANPRASAWVSANAGAGKTKVLTDRVVR
                     LLLDGAHPGRLLCLTFTKAAAANMAVRVFERLGKWVTLEEADLARELTELEGETPGRA
                     KLRLARRLFARAVETPGGLKIETIHAFCERLLHLVPFEANVPARFAVLDETQTSELVT
                     EATANVFAEAASGEHPGLAAALDVISVEAAGDALAAAIRDALKESASLEQAGGLHAAL
                     QRLRTTLGLSAEETAADIERGMLEDGLAPRQWPEVAAHLDTGKATDRTRAAALLAAAN
                     ASNADERLGHYLSVFFTDEGKPRAE"
BASE COUNT          895 a         2296 c         2155 g          974 t
ORIGIN      
        1 ccgatctcgc ggcgacaacg agcctggcgg cattcatcgc cgcgcaggtg cagcccggcg
       61 acctcgtcac gctctccggc gacctcggcg ccggcaagac ggcattggcg cgcgccatcg
      121 tgcgcgtgct ggcgatggat cccgagctcg aggtgccgag ccccaccttc acgctcatgc
      181 agacttacga gagccggcgc gggccgatcg tacatgcgga tttctatcgc atcgccgggc
      241 ccggcgagct gatcgagctg ggctgggacg aagtcgcgga tacatccatt ctgctggtcg
      301 aatggccgga gcgcgccgcc gccgcgctca acccagcgcg tctcgacgtg catctcgagc
      361 tggctcccgc cgacggcccg gacatgcgca tcgccacctt gcgggcgagc ggctcgctgg
      421 cgagccggtt cgcgcaggcg cgcgcgctgc gcggcctgct ttacgacgcc ggctgggcgg
      481 acggccggcg catcgcgatg cagggcgacg catccacgcg tgcctatgag cgcctcgtca
      541 agccgtccgg cgagaccgcg gtcctgatga tctcgccgcc gcggcccgac ggcccgccgg
      601 tgcggcgcgg caagccctac agcgccatcg ccaggctcgc cgagagcgtc catgccttcg
      661 ttgccatgga caaggggctg cgcgccttgg gcttcagcgc gccgcacatc tacggcgagg
      721 atctcggcgc cgggctcctg gtgatcgagg acctcggcaa cgagccggtc gtcggtcccg
      781 acgggccgat tcccgagcgt tacgccgaag cgacgcggct tcttgcgcgc ctgcacggca
      841 ccatgctgcc gaacatcctc ccggtggccg agggccacga ccacgttctt ccgccctacg
      901 atctcgacgc gctgctgatc gaggtcgagt tgctggtcga ttggtactgc ccccacgtcg
      961 ccggcttgga tccgtcgggc tcggtgaggg gcgagttcgt caatctctgg cgcgaagcgg
     1021 tggcagagat cctgcgcggc ccgacgacct ggaccctgcg cgactatcac tcgcccaatc
     1081 tgctgtggct gccgagccgg tcaggggtcg cgcgcgtcgg gttactcgat ttccaggacg
     1141 cggtgctggg tcatcctgcc tacgacctcg tctcgctcct gcaggatgcg cgcgtgacgg
     1201 tgccgccgga tctcgagatc aagctgctcg gcctttacgc gcgcgagcgt cagacggccg
     1261 atgccgcttt cgacatgtcg gccttcgccc gcgcctacgc gatcctgggc gcgcagcgcg
     1321 ccaccaagat cctcggcatc ttcgcgcgcc tcgaccggcg cgatggcaag ccgcactatc
     1381 tcgcccatct gccgcgcatc gagacgtatc tcgcgcgcaa tctcgcccac ggcgcggtag
     1441 cgaagctgcg cacatggtat gacacgcacc tgccgcgcct cgccggcaac gcgtaaccga
     1501 cgacgaccgc cgcatgagca acgatccgtc atccccactg accacggcca tggttctggc
     1561 ggcagggctc ggcaagcgca tgcgccccgt caccgcgacc attccgaagc cgctcgtcga
     1621 ggtgggcggg cgcgcgctga tcgatcacgc cctcgaccgg ctcgccgcgg ccggcaccag
     1681 gcgcgcggtc gtcaatgtgc attaccttgc cgacctcgtc gaagcgcatg tccgccggcg
     1741 gcagcagccc gcgatcgtca tctccgatga gcgcggcgag cttctcgaaa ccgggggcgg
     1801 cgtcaggaaa gcgttgccgc tgatcggcag cgcgccgttc gtgctcctca actccgattc
     1861 cctgtggata gaaggggccg aggccaacct gccgcgcttg cggcaggcct gggccgaagc
     1921 caggatggat atcctgctgc ttgtggcggc ggtcgagcag acccttggct acgaaggctt
     1981 tggcgacttt gccatggagc cggacggccg cctcaggcgg cgcggcgagg agcagacggc
     2041 gccgttcgtc tatgccgggg tcgccatcct gaggccgcaa ttgttcgttg acacgcctga
     2101 cggggcgttt tcgctgaatc tcctgttcga tcgggccatc gcggcgggcc ggctctacgg
     2161 ccttcgtctc gacgggcaat ggctgcatgt gggcacgcct gaatcgatcg ccgcagcgga
     2221 ggagcgcctc gtcgcaagca tgcgctgagg gcttatggcg tctttggacc cccgcgtctt
     2281 cacgatccca tcgggtgcgc cgtttctgcc gacgctcgcc gacgccctga cgcgcggccg
     2341 catcctcgac gggctcggcg acgctgccag ccttgcccgc gccaccatct atctgccgac
     2401 gcggcgggcc gcccgcgcgc tcgcgacgct cctcgccgcg cacggcgacg gccgcgcgca
     2461 actcctgccg cgcatcgtgc cgctgggcga ggccgacggc gccgagttcg agctcgccgg
     2521 aggtgggccc gacgacgcgg tcttcgaagg cgccgaggcg cttgccccgc cgattgcccc
     2581 gctcgagcgg cgactgatcc tgacccgcct catccagcgc tgggccgaga ccgtcgaccg
     2641 tgcccgcctc aggcttgaag ctgacgcgcc gcttctcgtg ccgtcctcgc cggccgatgc
     2701 ggtcggcctc gccggcgacc tcgaacggct catggacgcg ttcacgaccg aaggaatccc
     2761 gtgggagcaa ctcgccaacg cggtcgagat cgatttttcg gagtatttcg ggctgacgct
     2821 cgatttcgtc cgcatcgcca cggagtattg gcccaagatg ctggcggagc gcgaggcgag
     2881 cgatccggcc tctcggcgca gcgcgctgat ccatgccgag gcgcggcgcc ttctgcgcga
     2941 ccggcccgcg gctccggtcg tcgcggccgg atcgaccggc tcgatgcccg ccaccgcggc
     3001 cctcctcaat gcgatcgcgc ggcttcccaa cggcgccgtc gtgctgcccg gcctcgacac
     3061 ggatctcgac gaggcgagct gggcctcgat cggcggcctc gaaaccgacg acagcgatcc
     3121 ggttcacgga catccgcagg ccatgctgcg ccgcctgctc gacggctatt ttaaaattcc
     3181 ccgggcggcc gtgcaggttc tcgatccgtc cgccggtccg atggcggcgc gcagccgcgt
     3241 cctgtcggaa gcgctgcggc ccgccgacac caccgatctt tggggcacgc tgcccgcggg
     3301 gagccgcgct gacctggcgc gccagggctg cgaaggcatc aagctggtcg aggccgcgga
     3361 cgagcgcgac gaggcgctcg cggcagccat cgctttgcgg gaaacgcttg cctcgccggg
     3421 ccgcacggcg gtgctcgtga cgccggatcg ggggctcgcc aaacgtgtcg cggccgagct
     3481 cgcccggtgg gacatcgcgg tcgaggactc ggccggcgtg ccgctgtcgg agacgccggc
     3541 aggtcttctc gcccggcttg ccgccgacgc cgcggcgctc gatttccatc ccacccgtct
     3601 gctcgctctt ctcgcccatc cgcaggtgcg gctcggatgg ccgcgcgccg tgctcgaacg
     3661 ggctgcgagc gcgctcgaga tcggcgtcct gcgcggcccc gcgccggcgc cgggactcgt
     3721 cggtctgcaa cacgcccttg ccggcagccg cgccacgctg agccggcata cgccgcgtcc
     3781 acggcgccgc ctgtcggccg acgactggaa actcgccgcc gagcttgtcg cgcggcttgc
     3841 ggacgcgttt gcaggattca cggccgaaac gctcggggaa gcggcggtcg atctcgtggc
     3901 tgtcacgcat gcgcaccggc ggacggtcga tgccctgagc gcgagccccg acgagtctga
     3961 accggccgag ggggaggacg gatcggcgga agcgctggcg gcgttgttcg acgatctctc
     4021 cctctccgag accggcggcg tgcacggccg cttcgccgag tatcctgcct tcttcaccac
     4081 gctggcgcgc gagcgcgtga tccccgcggc atcgcgcggc tcgacgcacc gtcgcatcag
     4141 gattctcgga cttctcgaag cgcgcctgct ctcggccgat cgggtcgtgc tcggcggcct
     4201 cgacgaagcc gtgtggccgc cgcgcaccga gaccgatgcc tttctcaacc ggccgatgcg
     4261 ggcgcgcgtt ggcctgtcgc cgcccgagcg ccgcatcggc cagaccgccc atgatttcgt
     4321 gcaggcgctc ggaacgagcg acgtcgtgat cacgcgcgcg cagaaacgcg atggcgcgcc
     4381 gacggtgccg tcgcgcttcc tgcagcgcat gaaggccttc acgggcgagg cgatctggcg
     4441 cgacgtagct gctgccggcg agcgctatct gcagctggcg cgggcgctcg agacgccgaa
     4501 accggcgcgg ccgctgccgc ggccggcacc gaagcccgac cccgcgctgt tcccgcgcac
     4561 gctcagcgtc accgagatcg agacgctggt gcgcgatccc tacagcatct tcgcgcgtca
     4621 cgtgctcaag ctcgacgcgc tcgagccgat tgccggcacc ccgagcgccg ccgagcgtgg
     4681 caccatcatt cacgacgtcc tcggcagctt cgccacggac catgccgacg agttgccgcc
     4741 gcacgcgctc gaggacctga tgcagcgcgg cgaagacgcc ttcggccgca tcgccgacgc
     4801 ctttcccgaa ttgtatgcgg cgtggtggcc gcgtttcgtg cggctcgccg ccgaattcgt
     4861 cgtgtgggaa gacgcgcgcc gccccgggct cgcacgcatc catcccgagc tgtccggatc
     4921 gctgccgatc gcgttgccgg atggcagcac cttcaccttg cgcgcccgcg ctgaccgcat
     4981 cgaggcgcgc cgcgacgggg gctattcgat catcgatttc aagaccggca cgccgcccgg
     5041 cgtgaaggag gtgttcgcgg gcttctcgcc gcagctcacg ctcgaagccg cgatgctgat
     5101 gcagggcgcc ttcaagaacg tgccggcggc gccggacacg cccgacctcg tctacgtgca
     5161 tacgtcgggt ggacgaaagc cgctgaagcc gcgcgagatc aagccgccgc ccggcgagac
     5221 gcgctccgtc gccgacatcg tcgagcagca ccgcgacagg ttcacgcatc tcctcgcccg
     5281 ttacgtctcg ggcgagacgg gctacctgtc gcgcccctat cccaaatacg ccaagcgctt
     5341 ctccgattac gaccacctcg cgcgcgtcaa ggaatggtcg ctgacgaatg gcggcgacga
     5401 gaacgggttg gagtgatggg cgagctcgtc atcggaccgg acaccaagga cgcgcagcgc
     5461 cgcgccgcga atccgcgcgc ctccgcgtgg gtgtctgcca atgccggcgc cggcaagacg
     5521 aaggtgttga ccgaccgcgt ggtgcgcctg ctgctggacg gggcccatcc gggacgcctc
     5581 ctctgcctca ccttcaccaa ggcggccgcc gccaacatgg cggtccgcgt cttcgagcgg
     5641 ctcggcaagt gggtgacgct cgaggaagcc gatctcgcca gggagctgac cgagctcgag
     5701 ggtgagacgc cgggcagggc aaagctgcgt ctggcgcggc ggctgttcgc gcgcgcggtc
     5761 gagactccgg gcggtctcaa gatcgagacc attcacgcct tttgcgaacg cctgctgcat
     5821 cttgtgccgt tcgaggcgaa cgttccggca cgcttcgccg tgctcgacga gacgcagacg
     5881 tcggagctcg tcaccgaagc caccgccaac gtgttcgcgg aagccgcgag cggcgagcat
     5941 cccggtcttg ccgcggcgct tgacgtgatc agcgtcgagg cggccggcga cgcgctcgcc
     6001 gccgccatca gggatgcgtt gaaggaaagc gccagcctgg agcaggccgg tggcctccac
     6061 gcggcgctgc aacgtctgcg cacgacgctc ggtctctcgg ccgaggagac ggctgccgac
     6121 atcgaacgcg gcatgctcga agacggtctc gcgccgaggc agtggccaga agtcgccgcc
     6181 cacctcgaca cgggcaaggc gacggaccgc acgcgtgcgg cggcgcttct cgccgcggcc
     6241 aacgccagca atgcggacga gcggctcggg cattacctct cggtgttctt caccgatgag
     6301 ggcaagccgc gcgccgaaag
//
LOCUS       DATAIQ010000467         1655 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_24614, whole genome shotgun sequence.
ACCESSION   DATAIQ010000467 DATAIQ010000000
VERSION     DATAIQ010000467.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1655)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1655)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1655
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_24614"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(164..1162)
                     /gene="glpX"
                     /locus_tag="VHN20_07750"
     CDS             complement(164..1162)
                     /gene="glpX"
                     /locus_tag="VHN20_07750"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015686400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042132 - fructose 1,6-bisphosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphatase"
                     /protein_id="HEX2725698.1"
                     /translation="MSVPITVHPGQVIERILTLELVRVTERAAVAAARLRGRGNEKAA
                     DQAAVDAMRRELNKLQIDGTVVIGEGERDEAPMLFIGEKVGNRAGPKVDIAVDPLEGT
                     TLCAKDMPGSIAVMAMAEAGTLLAAPDVYMQKIAIGPGYPKGVVDLDASPEENINNLA
                     KAKGVKPSEITALVLDRPRHAELISALRKIGAGVRLITDGDVAGVIFTTNPDKTGIDI
                     YLGIGAAPEGVLAASALRCIGGQMQGRLILDTDEKRARAATMGVKDPNKKYDMDEMSS
                     GDVIVAATGVTDGALLEGVKFGRDIIETETIVYRSITGTVRKIRAEHRELAKFQLD"
     gene            complement(1347..>1655)
                     /locus_tag="VHN20_07755"
     CDS             complement(1347..>1655)
                     /locus_tag="VHN20_07755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012319872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HEX2725699.1"
                     /translation="ERAPMQRHEGGYYIRLTVPDRPGAAAGIATRMAEADISLESILQ
                     KRSESAAIQDPHGKSGAPVPLVLITYAATESAIRSALERIGEDGLIAEPPQVIRIERE
                     "
BASE COUNT          219 a          550 c          596 g          290 t
ORIGIN      
        1 ctttagcggg agaggtcgag tcgcgccaaa ggcgcgaccg ggtgagggga agtcgctgga
       61 cgggcgcaac gggccatcgc gccacgttct gcaccgtggt ccctctcccc ggtccgctag
      121 cacggactcg accctctccc gctaaagggg agagggtggg cggctagtcc agctggaact
      181 tggccagctc gcggtgctcg gcgcggatct tgcgcacggt cccggtgatc gagcggtaga
      241 cgatggtctc ggtctcgatg atgtcgcggc cgaacttgac gccctcgagc agcgcgccgt
      301 cggtgacgcc ggtcgcggcg acgatcacgt cgcccgacga catctcgtcc atgtcgtatt
      361 tcttgttcgg gtccttgacg cccatggtgg cggcgcgggc gcgcttctcg tcggtgtcga
      421 ggatcaggcg gccctgcatc tggccgccga tgcagcgcag cgcgctggcg gcgagcacgc
      481 cttccggcgc ggcgccgatg ccgagataga tgtcgatgcc ggtcttgtcg ggattggtgg
      541 tgaagatcac gccggcgacg tcgccgtcgg tgatcaggcg cacgccggcg ccgatcttgc
      601 gcagcgcgct gatcagctcg gcatggcgcg gccggtcgag caccagcgcg gtgatctcgc
      661 tcggcttgac gcccttggcc ttggcgaggt tgttgatgtt ctcctcgggc gaggcgtcga
      721 ggtcgacgac gcccttcggg tagcccggcc cgatggcgat cttctgcatg tagacgtcgg
      781 gcgcggcgag cagcgtgccg gcctcggcca tggccatcac ggcgatcgag cccggcatgt
      841 ccttggcgca caaagtcgtg ccttcgagcg ggtcgacggc gatgtcgacc ttggggccgg
      901 cgcggttgcc gaccttctcg ccgatgaaca gcatcggcgc ctcgtcgcgc tcgccctccc
      961 cgatcaccac cgtgccgtcg atctgcagct tgttgagctc gcggcgcatg gcgtcgaccg
     1021 ccgcctggtc cgccgccttc tcgttgccgc gcccgcgcag gcgcgcggcg gccacggccg
     1081 cgcgctccgt gacgcgcacg agctcgagcg tcaggatgcg ctcgatgacc tggccgggat
     1141 ggacggtaat cgggacggac atggggattg ctcctcgtta agttggtgca tctttgtcat
     1201 tgccgggcca cgaaggcgag ccccctctcg gcaatcggca atcggcagtc ggcagtcggc
     1261 agtcggcagt cggtgacaag aatgacaatc gaggccagga ggccagcccc tactgccgac
     1321 tgccgactgc cgactgccgc ttaaggttac tcccgctcga tgcggatcac ctgcgggggc
     1381 tcggcgatca gcccgtcctc gccgatccgc tcgagggccg agcggatggc ggactcggtg
     1441 gccgcgtagg tgatcaggac gagcggcacc ggcgcccccg acttgccgtg cgggtcctgg
     1501 atcgcggcgc tttccgagcg tttctgcagg atgctttcga gggagatgtc ggcctcggcc
     1561 atgcgcgtcg cgatgccggc cgcagcgccg ggccggtcgg gcacggtcag gcggatgtaa
     1621 tagccgccct cgtggcgctg catcggcgcg cgctc
//
LOCUS       DATAIQ010000468         5971 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_393962, whole genome shotgun sequence.
ACCESSION   DATAIQ010000468 DATAIQ010000000
VERSION     DATAIQ010000468.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 5971)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5971)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5971
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_393962"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..428
                     /locus_tag="VHN20_07760"
     CDS             <1..428
                     /locus_tag="VHN20_07760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX2725700.1"
                     /translation="ANTVGIAGAVLTLLVLAAAALAVAFATHGAMAGNREVVDVLHFV
                     GAHDRFIAREFQRRFFRLGLKGGLIGGCLAVGVIVTLSFVAASWRESPAGDQIEAMFG
                     ALDIGWRGAASAAVIVLLVAAITAVVSRQTVKHFLNRTS"
     gene            509..1267
                     /locus_tag="VHN20_07765"
     CDS             509..1267
                     /locus_tag="VHN20_07765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HEX2725701.1"
                     /translation="MSGPDAIEVVPTGWEWQTNAAPAVLPRPRRFVKYALAACALGVV
                     AFAMAMLGGFYAFVSSIDRYERNPTARTDAIVALTGGAQRVGDAIDLLAKGYAGRLLI
                     SGVNERTGRDEIARLNPGQRRLLDCCVDLDYRARNTIGNAIETRRWMRDHGFRSLIVV
                     TSNYHMPRTLTELDHVLPGVRKVPYPVVTGSVDLDGWWREPGTAKLLAYEYAKFLAVW
                     FRTRIEKDPERSPAATLMGGGRPVKAPSESLRKG"
     gene            1448..2215
                     /locus_tag="VHN20_07770"
     CDS             1448..2215
                     /locus_tag="VHN20_07770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HEX2725702.1"
                     /translation="MLAVRSFLFNAAFYANLIVWMLAALPLLLAPRMALMRVAQGWAR
                     SNLWLLRMIAGTRVEIRGGEHVPPGGLLVASKHQSLWETFALATLFDDPTFVLKRELM
                     WIPLFGWFLWKADMVPIDRRAGSSALREMTRRARDEVAHGRQLLIFPEGTRRAPGAEP
                     AYKYGIVHLYENLGVPCVPVALNSGLFWPRRSFIRRPGTIVVEILEPIPPGLPRDAFF
                     RTMTQQIEEASNRLLAEGQAQPGAAGPMPLSNKDRLA"
     gene            2356..2694
                     /locus_tag="VHN20_07775"
     CDS             2356..2694
                     /locus_tag="VHN20_07775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725703.1"
                     /translation="MREERLRATAGVRGLELSSWRGRSGRRYVVGVHALTETDILEVT
                     EAIVIAVRRDKDGVAHVVEIEAAGPRERLRRSWISAMRARGATEMHVHRLAETESARR
                     AIIEDLRENA"
     gene            2731..3519
                     /gene="aac(3)-IV"
                     /locus_tag="VHN20_07780"
     CDS             2731..3519
                     /gene="aac(3)-IV"
                     /locus_tag="VHN20_07780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011976343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAC(3)-IV family aminoglycoside
                     N-acetyltransferase"
                     /protein_id="HEX2725704.1"
                     /translation="MNSPALSKAEIVDQLRRLGVVPGGVLLVHTSFRAVRPVEGGPAG
                     LIAALRAAQGAGTLVMPSWTGDDEAPFDPATTPASPDLGVVADVFWRLPGVRRSAHPF
                     ACAAVGPLAEPIVADPLPLPPHIPQSPVGRVHERDGQVLLIGVGHDADTMLHLAELLA
                     GVPYGVPKHCTVVQDGRPVRVPYGENDHCCERFVLADGWLRGKNLQAEGPVGHAHARL
                     VRARDVVRVAREHLARDPLIFLHPSAAGCADCDTARRTVAGAGK"
     gene            complement(3527..4054)
                     /locus_tag="VHN20_07785"
     CDS             complement(3527..4054)
                     /locus_tag="VHN20_07785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015930954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamylcyclotransferase"
                     /protein_id="HEX2725705.1"
                     /translation="MVETSDDLWVFGYGSLMWRPGFPFVERHRAQLHGYHRSLCIFSH
                     VHRGTPDAPGLVLGLDRGGRCRGIAFRVAADEVDATRTYLREREQITGVYLERHVRVH
                     LDDGRRVAALTFVADRRHPQYAGRLPEADLMRLVRQGVGLSGANPDYVRATHEHLIEI
                     GVSDPILARIAAALA"
     gene            4278..5354
                     /locus_tag="VHN20_07790"
     CDS             4278..5354
                     /locus_tag="VHN20_07790"
                     /inference="COORDINATES: protein motif:HMM:NF021423.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2125 domain-containing protein"
                     /protein_id="HEX2725706.1"
                     /translation="MTDHAPSVQQRRSRFWLFAPTLILVVVAAAWTTAWFVIRDQTTR
                     ALDSWLAQEMALGRQWSCPNRTVGGYPFRIEVECDALSLQRPDFRISLGPVSSVAQVY
                     RPRHIITSVSGPLAATDGRVTVTGNWRSLEASIRTSPEGLQRVSLVTEAATLTVKGLT
                     PDEIAASASRVETHVRPDPQRGAREGAYDWSLQLAQAGVPLLDNLVGDADPIDLDLQL
                     TATQVRDAAARAWPQELERWRQAGGRVEIAALSLIKGPRGVEAKGEISLDEAHRLQGQ
                     IDASAAGLETLLAKLFGAPSGLAGALLSGGMRQAPAAQIPPAPGQAQATKPALKPLPA
                     IRLDGGRVRFGPISIPGIRLPPLY"
     gene            complement(5419..>5971)
                     /locus_tag="VHN20_07795"
     CDS             complement(5419..>5971)
                     /locus_tag="VHN20_07795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="prephenate dehydrogenase dimerization
                     domain-containing protein"
                     /protein_id="HEX2725707.1"
                     /translation="HSGPDAGFATLFFNRWCILTPPDGTDPDALARVRAFWEALGSNV
                     EVMTPQHHDLVLAITSHVPHLIAFNIVGTAADLEEVTQSEVIKFSAGGFRDFTRIAAS
                     DPTMWRDVFLHNKEAVLEMLGRFNEDIAALARAIRWGDGEALFNLFARTRDIRRGIIS
                     VGQETAEPDFGRRRDGQGDIKPG"
BASE COUNT          920 a         2062 c         2017 g          972 t
ORIGIN      
        1 tggccaacac ggtcgggatc gccggcgccg tcctgaccct gctcgtgctg gcggcggcgg
       61 cccttgccgt ggcgttcgcc acccacggcg ccatggccgg caaccgcgag gtcgtcgacg
      121 tgctgcattt cgtcggcgcc cacgaccgct tcatcgcccg cgaatttcag cgccgcttct
      181 tccggctcgg cctgaaaggc ggcctgatcg gcggctgcct ggcggtcgga gtgatcgtca
      241 ccttgagttt cgtggccgcc tcgtggcgcg agagccctgc cggcgaccag atcgaggcga
      301 tgttcggagc gctcgacatt ggctggcgcg gcgctgcgtc ggcagccgtg atcgtgcttc
      361 tcgtcgccgc gatcacggct gtcgtgtcgc ggcaaacagt taagcatttt cttaaccgga
      421 cgtcgtaagc ttcccgctag ggtttcaatt tcctggcgtt caccgtatct tggccgatgt
      481 gaaagctatc acctcgcgga cacgggacat gtcaggtccg gacgcgatcg aagtcgtgcc
      541 aacgggatgg gaatggcaga cgaacgcggc gccggccgtc cttccacggc cccgtcgctt
      601 cgtgaaatac gccctcgcgg cttgcgcgct cggcgtggtc gcgttcgcga tggcgatgct
      661 cggcggtttc tacgccttcg tcagctcgat cgaccgctac gaacgtaatc cgacggcccg
      721 caccgacgcc atcgtcgcgc tgaccggggg cgcccagcgc gtcggcgacg ccatcgacct
      781 tctcgccaag ggctacgccg gccgccttct gatctcgggg gtcaacgagc gcacgggccg
      841 cgacgagatc gcgcgcctca atccgggcca gcgtcgcctg ctggattgct gcgtcgacct
      901 cgactaccgg gcccgcaaca ccatcggcaa cgccatcgag acgcgccgct ggatgcgcga
      961 ccatggcttc cgctcactga tcgtggtgac gtccaactac cacatgccgc gcacattgac
     1021 cgagctcgac catgtcctgc ccggcgtgcg caaggttccc tacccggtgg tcaccggctc
     1081 ggtcgatctc gacggctggt ggcgcgagcc gggcactgcc aagctactgg cctacgaata
     1141 cgcgaaattt ctggcggtct ggttccgcac gcgcatcgag aaggaccccg agcgctcgcc
     1201 ggcggcgacg ctgatgggcg gcggccgtcc cgtgaaggcg cccagcgagt ccctgcgcaa
     1261 gggctgaaag caagcctcga gccagacgtc ccaggacgac aaagccgaca tgggctagac
     1321 gcgttacact cacgtggaat cgcctctggg tttttcggaa gatcgcattt tctgcggcga
     1381 gcccgctcca cttcgccgga aaatgctcta gaggcgttcc accgcaccgg aacctgtcct
     1441 cgacctgatg ctggccgtcc gctcgtttct cttcaatgcc gccttctacg ccaacctgat
     1501 cgtgtggatg ctggcggcgc tgccgctgct gctcgcgccg cgcatggcgc tgatgcgcgt
     1561 tgcgcagggc tgggcccgca gcaatctgtg gctgctcagg atgatcgccg gcacccgggt
     1621 cgagatccgg ggcggcgagc acgtcccgcc cggcggattg ctggtcgcct cgaagcatca
     1681 gtccctgtgg gagaccttcg cgctggccac gctgttcgac gatccgactt tcgtgctcaa
     1741 gcgcgagctg atgtggattc cgttgttcgg ctggtttctc tggaaggccg acatggtccc
     1801 gatcgaccgc cgggccggtt ccagcgcgct cagggagatg acccgccgcg cccgagacga
     1861 ggtcgcgcat ggccgccagc tgctgatctt tcctgaaggg acgcgccgcg cgcccggcgc
     1921 cgagcccgcc tacaaatacg ggatcgtgca tctttacgag aacctcggcg tgccgtgcgt
     1981 tccggtggcg ctgaactccg gcctgttctg gccgcggcgg agcttcatcc gacgtccagg
     2041 cacgattgtc gttgagatcc tggagccgat cccgcccggc ctgccccgcg atgcgttctt
     2101 ccggaccatg acgcagcaga tcgaagaggc gtcgaaccgg ttgttggcgg aaggccaggc
     2161 gcagcctggc gccgcagggc cgatgcccct gtccaacaag gatcgcttgg cgtgagctcc
     2221 gcgcaatgtg tcgcaacggc cgccattgac gttcgcgcca tgttttccta tttagaacaa
     2281 atggcgaaca tgagaaccat ttcgtggtcc gccgccatgc gtgatctgcg tcaccatcgg
     2341 gtacggagag ctggcgtgcg ggaagaacga ctgagggcga cggcgggcgt gcgcggcctc
     2401 gagctgagct cgtggcgcgg ccgctcggga cgccgctacg tggtcggggt gcatgccctg
     2461 accgagaccg acatcctcga ggtgaccgag gcgatcgtga tcgcggtgcg gcgcgacaag
     2521 gacggcgtcg cgcacgtggt cgagatcgag gcggccggtc cgcgggagcg cctgcgcagg
     2581 tcgtggatct cggccatgcg cgcccgcggc gccaccgaga tgcacgtgca tcgcctcgcc
     2641 gagaccgaat cggcgcgccg tgccattatc gaagacctgc gcgaaaacgc ttaaaggcta
     2701 gatccgtggc tggcgcccag tgagatgcgg atgaacagcc ctgccctcag caaagccgag
     2761 atcgtcgatc agctgcggcg cctcggcgtc gtgccgggcg gcgtattgct cgtgcacacc
     2821 tcgtttcgcg cggtgcggcc ggtcgagggc gggccagcag ggctgatcgc ggctttgcgc
     2881 gcggcgcagg gcgccggcac gctcgtcatg ccgtcctgga ccggcgacga cgaggcgccc
     2941 ttcgacccgg cgaccacgcc ggcgtccccg gatctcggcg tcgtcgccga cgtcttttgg
     3001 cgcctgccgg gcgtgcggcg cagcgcccat cctttcgcct gcgcggcagt cgggccgctg
     3061 gccgaaccga tcgtcgccga tcccctgccg ctaccgccgc acattccgca aagcccggtc
     3121 ggccgcgtgc acgagcgcga tgggcaggtc ctgttgatcg gcgtcggtca tgacgccgat
     3181 acgatgctgc acctggcgga gctgctcgcc ggtgtccctt atggtgtgcc gaagcattgc
     3241 acggtcgttc aggacggccg gccggtgcgc gtgccttacg gcgagaacga ccattgctgc
     3301 gagcgctttg tcctcgcgga cggatggctg cgcggaaaga atctccaggc ggaagggccg
     3361 gtcggacatg cccacgccag gctggtccgg gcgcgcgacg tggtgcgtgt cgcgcgcgag
     3421 cacctcgccc gcgacccgct gatcttcctg catccttccg ccgccggctg cgccgattgc
     3481 gacacggcgc gccgaaccgt cgccggagcg ggaaagtagg ccgccatcag gccagcgcag
     3541 ccgcgatgcg ggccaggatc gggtcgctga cgccgatctc gatcaggtgc tcgtgcgtgg
     3601 cgcgcacgta atcggggttt gcgccagaca ggccgacgcc ctggcgcacg aggcgcatca
     3661 ggtcggcctc cggcaggcgg cccgcatatt gcggatggcg ccggtcggcc acgaaggtca
     3721 gggcggcgac ccgccggcca tcgtcgaggt gcacgcgcac gtgccgctcc agataaacgc
     3781 cggtgatctg ctcgcgctcg cgcagatagg tccgggtcgc gtcgacctcg tccgcggcaa
     3841 cccggaaggc gatgccgcgg cagcgcccgc cgcggtcgag gccaagcaca aggcctggcg
     3901 cgtccggcgt gccgcggtga acgtgcgaga agatgcacag cgagcggtga tagccgtgca
     3961 gctgggcccg atgccgttcg acgaagggaa agccgggccg ccacatgagc gacccgtatc
     4021 cgaacaccca gagatcgtcg gacgtctcca ccatgccccg aaccttgcgt ccggcatgcg
     4081 ccttcgaaag gctgacgcgc gcacgcgtgc aaaaccgcaa accacttttg ctaacgcgcg
     4141 ttaccagcta gagcgggatg gcttcaagtt gaatccaccc cgccctagtt ttccttgtgt
     4201 cgcatgatct tactcggtga agcggatccg cttcgcggat catgctccag ccggccgcgg
     4261 cgcaaccgga gacctcgatg acggaccacg ccccgagcgt gcaacaacgc cgcagccgct
     4321 tctggctgtt cgcgccgacc ctgatcctcg tcgtggtggc ggccgcctgg acgaccgcct
     4381 ggttcgtgat tcgcgaccag acgacccgcg cgctcgactc gtggctcgcg caggagatgg
     4441 ccctggggcg gcagtggagc tgcccgaacc ggaccgtcgg cggctatccc ttccgcatcg
     4501 aggtggaatg cgatgccctc agcttgcagc gtcccgattt ccgcatctcg ctcggccccg
     4561 tgtcgtcggt cgcgcaggtc tatcgcccgc gccacatcat cacctccgtg agcgggccgc
     4621 tcgccgccac ggacggccgc gtcacggtca cggggaactg gcgtagcctg gaagcgagca
     4681 tccgcacttc gcccgagggc ctgcagcgcg tctcgctggt gacggaagcg gcgacactca
     4741 ccgtcaaagg actcacgccg gacgagatcg cagccagcgc cagccgcgtc gagacgcacg
     4801 tgcggcccga cccgcagcgg ggcgcgcgcg agggcgccta cgactggagc ctgcagctcg
     4861 cgcaagccgg ggtccctctt ctcgacaacc ttgtcggcga tgccgatccg attgatctcg
     4921 atctgcagct cacggcgacg caggtgcgcg atgccgcagc gcgcgcctgg ccgcaggagc
     4981 tcgagcgctg gcgccaggcc ggcggccgcg tcgagatcgc cgccctgtcg ctcatcaagg
     5041 gtccacgcgg ggtcgaagcc aaaggagaga tcagcctgga cgaggcgcat cgcctgcaag
     5101 gccagatcga cgcgtccgct gccggcctgg aaacgcttct cgccaaactt ttcggtgcgc
     5161 cctccgggtt ggccggcgcg ctgctgagcg gcggcatgcg gcaggcacct gccgcgcaga
     5221 tcccgccggc tccggggcaa gcccaggcaa ccaagccggc gctgaagccg ttgcccgcaa
     5281 tccgcctgga cggcggccgt gtgcgcttcg ggccgatctc gatccccggc atccgcctgc
     5341 cgccgctcta ctgatctgat ccggcaaagg ccaagccggg acccggatca cacgggcaac
     5401 gatcggaacg cgatcgttct aacctggttt gatgtcaccc tgaccgtcgc gacggcggcc
     5461 gaaatcgggc tcggcagtct cctggccgac cgagatgatg ccgcggcgga tgtcgcgcgt
     5521 gcgcgcgaac aggttgaaca acgcctcgcc gtcgccccag cggatggccc gcgccagcgc
     5581 cgcgatgtcc tcgttgaaac ggccgagcat ctcgagcacg gcctccttgt tgtgcaggaa
     5641 gacgtcgcgc cacatggtcg gatcggacgc ggcgatgcgc gtgaaatcgc gaaagccgcc
     5701 ggccgagaac ttgatcacct ccgactgcgt gacctcctcc agatcggcgg cggtgccgac
     5761 gatgttgaag gcgatcaggt gcggcacgtg gctcgtgatg gcgagcacga ggtcgtggtg
     5821 ctgcggcgtc atcacctcga cattggagcc gagcgcctcc cagaaggcgc gcacgcgcgc
     5881 caacgcgtcc gggtcggttc cgtccggcgg cgtcagaatg caccagcgat tgaagaacag
     5941 cgtcgcgaac ccggcgtcag gcccggaatg c
//
LOCUS       DATAIQ010000469         3560 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_302016, whole genome shotgun sequence.
ACCESSION   DATAIQ010000469 DATAIQ010000000
VERSION     DATAIQ010000469.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3560)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3560)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3560
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_302016"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1065)
                     /gene="tcuA"
                     /locus_tag="VHN20_07800"
     CDS             complement(<1..1065)
                     /gene="tcuA"
                     /locus_tag="VHN20_07800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011580404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent tricarballylate dehydrogenase
                     TcuA"
                     /protein_id="HEX2725708.1"
                     /translation="MAVKDPSYDVVVVGAGNAALCAALSAQENGARVLVLECAPEEES
                     GGNSRFTAGAMRVVYDGVDDLRKLMPDLTEEEIANTDFGSYTEEQFFDDMARVTQYRG
                     DPDLVSILVGQSRDTLMWMREKGVRFVPIYGRQAFKVEGRFKFWGGLTVEAWGGGPGL
                     VEALTASAKRHGIDVWFESRALSLLHDDDGVHGVRVKRQGRTQEVRARAVVLAAGGFQ
                     ANPEWRTRYLGPGWDLAKVRGTRFNVGDGIRMALDIGASSRGNWSGCHAVGWERNAPE
                     FGDLAVGDAFQKHSYPWGIMVNAHGKRFVDEGADFRNYTYAKYGRVILEQPGQFAWQV
                     FDNKVLHLLRDEYRIKQVTKV"
     gene            1227..3200
                     /locus_tag="VHN20_07805"
     CDS             1227..3200
                     /locus_tag="VHN20_07805"
                     /inference="COORDINATES: protein motif:HMM:NF014073.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HEX2725709.1"
                     /translation="MADTIYSALVNLFAGWTPFYLLLGVLVGLVVGILPALGTTAGMA
                     LLVPFVFGMDKTAALAMMTGLLAVVATGDTVTSILLGIPGASSSQATVVDGFPMAKRG
                     EAARALSAAYFSSMIGGVFGAVVLTGAIVAARPIILAFGTPEMLMLVLLGVTMVSLLS
                     GASLLKGFISLGLGMLLGALGPAPATGEYRFTFDNGYLMDGLPLGVVALAVFAIPEVI
                     DLLRRGEAIADRAPMGRGWLAGIIDTWRHKWLVLRCSIVGCIVGALPIGGSDWIAYGH
                     AVQTSKPRDTFGKGDVRGVIAPEAANNANAGGALVPALIFGIPGSGSTAVFLGGLILI
                     GVQPGPAMIDRNLELTYTIIWSLALANVFGAGLCFLISGQMAKLTTIPFVYLAPYILT
                     VVFFGAFQSTRQWGDLLALFAVGVFATFLRRFGYSRPAFLIGFVLQDNIETLLYQTVQ
                     FYTWSTLAARPLFWVLLAINLVSLWVGLKYRPALETEGTSHAATARSEVIPQVVFALT
                     AIALVLFSIYDVWALNFLGHVTPLTVAVITLGCALLGLGVLLTREFSHPFFFDSELGW
                     HRRDEGYLVDLLHYLFWIAGLVAGIYLVGLILAVAGFFVVFLRTKSDARWTSIFLMTA
                     ATIGVLSAMSYVFNLEFPSGLLQEFVPLPWPIN"
     gene            3228..>3560
                     /locus_tag="VHN20_07810"
     CDS             3228..>3560
                     /locus_tag="VHN20_07810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012330314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-2-hydroxyacid dehydrogenase family protein"
                     /protein_id="HEX2725710.1"
                     /translation="MIRVAVLDDYQRVALKLADWSQLGPDAKVDVFHENLATTDAAAE
                     VLQPYDVICLMRERMPMPRALIEQLPNLKLIIVTGARTHTIDFETTAARGITVCHTRP
                     GESQHATSE"
BASE COUNT          508 a         1254 c         1137 g          661 t
ORIGIN      
        1 gaccttggtg acctgcttga tgcgatattc gtcgcgcagg aggtgcagga ccttgttgtc
       61 gaaaacctgc caggcgaact ggccgggctg ctcgaggatc acgcggccat acttggcgta
      121 ggtgtagttg cggaaatcgg cgccctcgtc gacgaagcgt ttgccgtggg cgttgaccat
      181 gatgccccac ggatacgaat gcttctggaa cgcgtcgccg accgcgaggt cgccgaattc
      241 cggcgcgttg cgctcccagc cgaccgcgtg gcagccggac cagttgccgc gcgaggacgc
      301 gccgatatcg agggccatgc ggatgccgtc gccgacattg aagcgcgtgc cgcgcacctt
      361 ggcgaggtcc cagccggggc cgagatagcg cgtgcgccat tccgggttcg cctggaagcc
      421 gccggcggcg agcacgaccg cccgcgcccg cacctcctgc gtcctccctt ggcgcttgac
      481 gcgcacgccg tgcacgccgt cgtcgtcgtg cagcagcgac agggcgcggc tctcgaacca
      541 gacgtcgatg ccgtgccgtt tcgccgaggc cgtgagcgcc tcgacgaggc ccggaccgcc
      601 gccccaggcc tcgaccgtga ggccgcccca gaacttgaac cgcccctcga ccttgaaggc
      661 ctgccggccg tagatcggca cgaagcgcac gcccttctcg cgcatccaca tgagcgtgtc
      721 gcggctctgc ccgaccagga tcgagacgag gtcgggatcg ccgcgatatt gcgtcacccg
      781 cgccatgtcg tcgaagaact gctcctcggt gtaggagccg aaatcggtgt tggcgatctc
      841 ctcctcggtg aggtccggca tcagcttcct gagatcgtcg acgccgtcat agaccacccg
      901 catggcgccc gccgtgaagc ggctgttgcc gcccgattcc tcttcgggcg cgcattccag
      961 cacgagaacc cgcgccccgt tctcctgcgc cgacagcgcg gcgcacaagg cggcgttccc
     1021 ggcgccgacg acgaccacgt cgtaactcgg atctttgaca gccatcaaca gcagctcccg
     1081 gtcaggttcg tttttcaagc aggaaaggtc cgtataccga agccgccccg agcgacaagg
     1141 ctttgacggc ggacgatcgg cggctaacgt gccggtcctg ggcggccgct ggccgaagcc
     1201 ggaacgacaa tcgggggcgg acgcacatgg cggacacgat ctattcggcg ctcgtcaacc
     1261 tgttcgccgg atggacgccg ttctacctgc tgctcggcgt cctcgtcggc ctcgtggtcg
     1321 gcatcctgcc ggcgctcggc accactgccg gcatggcgct gctcgtgccg ttcgtgttcg
     1381 gcatggacaa gaccgcggcg ctcgccatga tgaccggact gctcgccgtg gttgcgaccg
     1441 gcgacaccgt cacctcgatc ctcctcggca ttcccggcgc gtcgtcgtcg caggcgaccg
     1501 tcgtcgacgg ctttccgatg gcgaagcgcg gcgaggcggc gcgggcgctc agcgcggcct
     1561 atttctcgtc gatgatcggc ggcgtgttcg gggccgtcgt gctgaccggc gcgatcgtcg
     1621 ccgcacgccc catcatcctc gccttcggca cccccgagat gctgatgctc gtgctgctcg
     1681 gcgtgaccat ggtcagcctt ctctccggcg ccagcctgct caagggtttc atttcgctcg
     1741 gcctcggcat gctgctcggc gcactcggcc cggcgccggc gaccggcgag tatcgcttca
     1801 ccttcgacaa cggctacctg atggacgggc tgccgctcgg cgtcgtggcg ctggccgtct
     1861 tcgccatccc ggaggtcatc gatctcctgc ggcgcggcga ggcgatcgcc gaccgggccc
     1921 cgatgggtcg cggctggctc gccgggatca tcgatacctg gcgtcacaaa tggctcgttc
     1981 tgcgctgctc gatcgtcggc tgcatcgtcg gcgcgctgcc gatcggcggc tccgactgga
     2041 tcgcctacgg gcacgcggtg cagacctcga agccgcgcga caccttcggc aagggcgacg
     2101 tgcgcggcgt gatcgcgccg gaggccgcca acaacgccaa tgccggcggc gccctcgttc
     2161 cggcgctgat cttcggcatt cccggctcgg gctcgacggc ggtgttcctc ggcggcctga
     2221 tcctgatcgg cgtgcagccg gggccggcga tgatcgaccg caacctcgag ctcacttaca
     2281 cgatcatctg gtcgctggcg ctcgccaacg tattcggcgc cggcctctgc ttcctgatct
     2341 ccgggcagat ggcgaagctc acgaccatcc cgttcgtgta tctcgcgccc tacatcctga
     2401 ccgtcgtgtt cttcggcgcc ttccagtcga cccggcaatg gggcgatctg ctggcgctgt
     2461 tcgcagtcgg cgtgttcgcg accttcctgc gccgtttcgg ctattcgcgg cccgccttcc
     2521 tgatcggctt cgtgctgcag gacaacatcg agacgctgct ctaccagacg gtgcagttct
     2581 acacctggag cacgctcgcc gcccgtccgc tattctgggt gctgctggcg atcaacctcg
     2641 tctcgctctg ggtcggcctc aaatatcgtc cggccctgga gacggagggg acgagccacg
     2701 ccgcgacggc acgctcggag gtgatcccgc aggtcgtgtt cgcgctgacc gcgatcgcgc
     2761 tcgtcctgtt cagcatctac gacgtgtggg cgctgaactt ccttggccat gtcaccccat
     2821 tgaccgtcgc cgtgatcacg ctgggctgcg cgctcctcgg tcttggggtc ctgctcacgc
     2881 gcgagttcag ccacccgttc ttcttcgatt ccgagctcgg ctggcaccgc cgtgacgaag
     2941 gctatctggt cgacctgctg cattatctgt tctggatcgc cgggctcgtc gccgggatct
     3001 atctcgtcgg cctgatcctc gccgtcgccg ggttcttcgt cgtgtttctg cgcaccaagt
     3061 cggacgcgcg ctggacaagc atttttctga tgacggcggc cacgatcggc gtcctgtcgg
     3121 cgatgtcgta cgtgttcaac ctcgaattcc cgagcgggct gctgcaggag ttcgtgccgc
     3181 tgccgtggcc catcaactga ctatcgaaac acgaagctgg gggagcaatg atccgcgttg
     3241 ccgttctcga cgactaccag cgcgttgcgc tcaagctggc cgactggagc cagctcggcc
     3301 ccgacgccaa ggtcgacgtg ttccacgaaa acctcgccac gacggatgcg gctgccgagg
     3361 tgctgcagcc ctacgacgtg atctgcctga tgcgcgagcg catgccgatg ccgcgcgcgc
     3421 tgatcgaaca gctgccgaac ctgaagctga tcatcgtcac gggtgcgcgc acccacacga
     3481 tcgatttcga gacgaccgcc gcccgcggca tcacggtctg ccatacccgc cccggcgagt
     3541 cccagcatgc cacctccgag
//
LOCUS       DATAIQ010000470         5099 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_302029, whole genome shotgun sequence.
ACCESSION   DATAIQ010000470 DATAIQ010000000
VERSION     DATAIQ010000470.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 5099)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5099)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5099
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_302029"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(43..1521)
                     /locus_tag="VHN20_07815"
     CDS             complement(43..1521)
                     /locus_tag="VHN20_07815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015667228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdiU family protein"
                     /protein_id="HEX2725711.1"
                     /translation="MTFHFPFDNSYARLPDRFFARVEPTPVAAPRLVRVNRELAAALG
                     LDPDWLAGPEGVDVLAGRRVPNGAEPIAMAYAGHQFGQFVPQLGDGRAILLGEVVAPD
                     GTRRDIQLKGSGPTPYSRRGDGRAALGPVLREYLVSEAMAALGIPTTRTLAAVLTGEA
                     VARDTFLPGAVLTRVASSHIRIGTFEFFAARRDSDGVRLLADHAIARHYPQAATAERP
                     YRALLDHGIARQAELVAQWLLVGFIHGVMNTDNTSIAGETIDYGPCAFMDAYDPAQVF
                     SSIDAYGRYAYGNQPRIALWNLARLAECLVPLLGANEDEAVADAKAALEAFGPQFDTA
                     YHAGLRRKLGLSGEDEGDRALAQDLLDAMAVNHADFTLTFRRLCDAAADPAGDAAVRG
                     LFSDAAAYDAWAARWRQRLALEPQDGDARRAAMRAVNPVFIARNHRVEAVIDAAIARN
                     DFGPFDELLGVVTRPYEDQPDLAHYADPPEPYERVLQTFCGT"
     gene            1672..3378
                     /locus_tag="VHN20_07820"
     CDS             1672..3378
                     /locus_tag="VHN20_07820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019403315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA synthetase"
                     /protein_id="HEX2725712.1"
                     /translation="MIPSAYDKDLDRNAANFQPLTPLTFLERAASVHPDHIAVIHGAQ
                     RRSYRELYARCRRLASALAQRGIGRGDTVSVMLPNTPPMLECHYGVPMVGAVLNTLNT
                     RLDARIVAFSLEHSDAKVLITDREFSPVVKAALDQLATKPLVIDYDDPEFTGAGERLG
                     DVEYEAFLSDGDPDFAWRLPGDEWDAIALNYTSGTTGDPKGVVYHHRGAYLLAMGNVV
                     TGGLGQHPVYLWTLPMFHCNGWCFPWSLSIVAGTHVCLRAVRARPMYDAIADHGVTHL
                     CGAPIVMSTLLNAPAGETRALPHTVRFFTAAAPPPEAVLAAMRKAGFDVTHLYGLTEV
                     YGPAVVNEWHRDWDHLEAADYAARKARQGVRYPVLEGLDVLDPDTMQPVPADGATLGE
                     VMFRGNVVMKGYLKNPSATGKAFEGGWFHSGDLGVKYPDGYIQLKDRSKDIIISGGEN
                     ISSIEVEDALYKHPAVQIAAVVAMPDEKWGETPCAFVEIKPDAVVSADELIAWCREHL
                     AAYKCPRTIRFAEIPKTSTGKVQKFRLREMARNLVIPPREGRADSGAQAPEPGGVAAP
                     TK"
     gene            complement(3449..4252)
                     /locus_tag="VHN20_07825"
     CDS             complement(3449..4252)
                     /locus_tag="VHN20_07825"
                     /EC_number="4.2.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase"
                     /protein_id="HEX2725713.1"
                     /translation="MSASLQHAANEDILLREDDDGVVTLTLNRPAQFNALSEAMLAAL
                     QAALDDVAADAHVRCVVLAAAGRAFCAGHDLKEMRASPRQDYYEDLFATCSRVMQSIV
                     GLPVPVIARVHGMATAAGCQLVATCDLAVAAESATFAVSGINVGLFCATPAVALSRNV
                     APKHAFDMLVTGRFISAAEALSYGLVNRAVPDAALDATVAALTADICAKSPVAVRTGK
                     AMFARQRAMSLADAYAYAGNVMACNMMAEDAAEGIDAFIAKRKPVWTGR"
     gene            complement(4408..>5099)
                     /locus_tag="VHN20_07830"
     CDS             complement(4408..>5099)
                     /locus_tag="VHN20_07830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008840119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEX2725714.1"
                     /translation="PLSEDEMQVLRGLPLTVVPVDADQDIVREGDRPSQSCILLEGFV
                     CRYKLTEDGRRQIFSFHTPGDIPDLQSLHLAVMDHNVKTLTRCKVAFVPHEALSELTR
                     RCPRVGDVLWRDTLIDAAIFREWMVGIGRRSAVTRIAHMLCEVFLRLKAIGLADGYEC
                     EFPITQTEIGDALGLSTVHVNRSLQELRSAGLIELRRGALGILDWPALCKAGEFDSVY
                     LHLDSKAQDAV"
BASE COUNT          814 a         1762 c         1763 g          760 t
ORIGIN      
        1 accagcaatc cgaacccgtg gcagtggcga ccgcggccgt gatcacgttc cgcagaacgt
       61 ctgcaggacg cgctcgtacg gctccggggg atcggcgtaa tgcgcgaggt ccggctggtc
      121 ttcgtagggt ctggtgacca cgccgagcaa ttcgtcgaag ggcccgaagt cgttgcgggc
      181 gatcgccgcg tcgatgaccg cctcgacccg gtggttgcgt gcgatgaaga ccgggttgac
      241 tgcgcgcatg gccgcgcggc gcgcgtcgcc gtcctgcggc tcgagggcga gccgttgccg
      301 ccagcgggcg gcccaagcgt cgtaggccgc cgcatcggaa aacagccccc gcacggccgc
      361 gtcgccggca ggatccgccg cggcgtcgca aaggcggcgg aacgtgagcg tgaaatcggc
      421 atggttcacg gccatcgcgt cgagcaggtc ttgcgccaac gcccgatcgc cctcgtcctc
      481 gcccgacagg ccgagcttgc gtcggagccc ggcgtgatag gccgtgtcga attgcgggcc
      541 gaatgcctcg agcgcagcct tcgcgtcggc gacggcctcg tcctcgttgg cgccgagcaa
      601 cggcacgagg cattcggcga gccgcgccag gttccacaac gcgatgcgtg gctggttgcc
      661 gtaggcataa cgcccgtagg cgtcgatcga gctgaagacc tgtgcggggt cgtaggcatc
      721 catgaatgcg cacgggccgt aatcgatggt ctcgccggcg atcgacgtat tgtcggtgtt
      781 catgacgccg tggatgaagc cgacgagcag ccattgcgcg acgagctcgg cctggcgcgc
      841 gatcccgtgg tcgagcagcg cgcggtatgg ccgctcggcc gtcgcggcct gcggatagtg
      901 acgcgcgatc gcgtgatcgg cgagcaggcg cacgccgtcg ctgtcgcgcc gcgctgcgaa
      961 gaattcgaac gtgccgatgc ggatgtggct cgaggcgacg cgggtgagca cggcgccggg
     1021 caagaaggtg tcgcgcgcca ccgcctcgcc ggtcaggacc gccgcgagcg tgcgcgtcgt
     1081 cgggatgccg agcgccgcca tcgcctcgct gacgagatat tcgcgcagca ccgggccgag
     1141 cgcggcgcgc ccgtcgccgc ggcgtgaata cggcgtcggc cccgagccct tgagctggat
     1201 gtcgcggcgc gtgccgtcgg gcgccacgac ctcgccgagc aggatggcgc gcccgtcgcc
     1261 gagctgcggc acgaactggc cgaactgatg cccggcatac gccatggcga tgggctcggc
     1321 gccattcggc acgcgccggc cggcgagcac gtcgaccccc tccggacctg cgagccagtc
     1381 gggatcgagc ccgagcgcgg cggcgagctc gcggttcacg cgcacgagcc tcggggcggc
     1441 cacgggcgtc ggctcgacgc gcgcgaaaaa ccggtcgggc aggcgggcgt agctgttgtc
     1501 gaaaggaaag tggaaggtca tggacggtca ggtgtggtca tcaaccaaga tggcgatgcg
     1561 aaccggcagg tcaatggacc gccctgccgc ccgcgccgga ttgggatagt cagccgaacc
     1621 gctcttggcc atacttggcc ataacaacat gggaccgctg gagacgccgc cgtgatcccg
     1681 agtgcttacg acaaggacct cgaccggaac gcggccaatt tccagccgct gacgcccctc
     1741 accttcctgg aacgggcggc cagcgtccat cccgaccaca tcgcggtcat ccatggcgct
     1801 cagcggcgca gctaccgcga gctttacgcc cgctgccggc gcctcgcctc ggccctggcg
     1861 caacgcggca tcgggcgcgg cgacaccgta tcggtgatgc tgcccaacac gccgcccatg
     1921 ctcgagtgcc attacggcgt gccgatggtc ggcgccgtgc tcaacacgct caacacgcgc
     1981 ctcgacgcgc gcatcgtcgc cttctcgctc gagcatagcg acgccaaggt gctgatcacc
     2041 gaccgcgagt tctcgccggt ggtgaaggcg gccctcgacc agctcgccac aaaaccgctc
     2101 gtcatcgact acgacgaccc ggaattcacc ggcgccggcg agcgcctggg cgacgtcgaa
     2161 tacgaagcgt tcctgagtga cggcgacccc gatttcgcgt ggcgcctgcc cggcgacgaa
     2221 tgggacgcga tcgcgctgaa ctacacctcc ggcacgaccg gcgatccgaa gggcgtcgtc
     2281 taccatcacc gcggcgccta cctgctcgcc atgggcaacg tcgtcaccgg tggcctcggc
     2341 cagcatccgg tttacctgtg gacgctgccg atgttccact gcaacggctg gtgctttccg
     2401 tggtcgctgt cgatcgtggc cggcacgcat gtgtgcctgc gcgccgtgcg cgccaggccg
     2461 atgtacgacg ccatcgccga tcacggcgtc acgcatctgt gcggggcgcc gatcgtgatg
     2521 tcgacgctgc tcaacgcgcc ggccggcgag acgcgcgccc tcccgcacac ggtccgcttc
     2581 ttcacggcgg cggcgccgcc gccggaagcg gtgctcgccg ccatgcgcaa ggccggcttc
     2641 gacgtgaccc atctctacgg cctcacggag gtttacgggc ccgcggtcgt caacgaatgg
     2701 caccgggact gggaccacct ggaggccgcg gactacgccg cgcgcaaggc gcgccagggc
     2761 gtgcgctatc cggtcctcga aggcctcgac gtgctcgacc cggacaccat gcagccggtc
     2821 ccggccgacg gcgcgacgct gggcgaggtc atgttccgcg gcaacgtcgt gatgaagggt
     2881 tatttgaaaa acccgtccgc gaccggaaag gcgttcgagg gcggctggtt tcattccggc
     2941 gatctcggcg tcaaatatcc cgacggctac atccagctga aggaccgctc caaggacatc
     3001 atcatctccg gcggcgaaaa tatttcgtcg atcgaggtcg aggacgcgct ctacaagcac
     3061 cccgccgtgc agatcgccgc cgtcgtggcg atgccggacg agaaatgggg cgagacgccg
     3121 tgcgccttcg tcgagatcaa gcccgacgcg gtggtgtccg ccgacgagct gatcgcctgg
     3181 tgccgcgagc acctcgccgc gtacaaatgc ccgcgcacga tcaggttcgc ggagatcccc
     3241 aagacctcga ccggcaaggt gcagaaattc cggctgcgcg agatggcccg caacctcgtc
     3301 atccctcccc gcgaggggag ggcggactcg ggtgcgcaag cacccgagcc tggtggggtg
     3361 gcagcgccaa cgaaatgagg tcggcgcagc ctccccatcc cggtcggctt cgccgactcg
     3421 accctcccct cacggggagg gatagcgctt accgccccgt ccacacgggc ttgcgcttgg
     3481 cgatgaacgc gtcgatgccc tcggcggcgt cctcggccat catgttgcag gccatgacgt
     3541 tgcccgcata ggcgtaggcg tccgcgagac tcatcgcgcg ctgccgcgcg aacatcgcct
     3601 tgccggtgcg caccgcgacc gggctcttgg cgcagatgtc ggcggtgagc gcggcgacgg
     3661 ttgcgtcgag cgcggcgtcg ggcacggcgc ggttgacgag cccgtaggac agcgcctcgg
     3721 cggcggagat gaagcggccg gtgacgagca tgtcgaaggc gtgcttcggc gcgacgttgc
     3781 gcgacagcgc caccgccggc gtcgcgcaga acaggccgac attgataccg gagaccgcga
     3841 aggtcgcgct ttcggccgcg accgcgaggt cgcatgtcgc caccagctgg cagccggccg
     3901 ccgtcgccat gccgtgcacg cgcgcgatca ccggcaccgg caggccgacg atgctctgca
     3961 tgacgcggct gcaggtcgcg aacaggtctt cgtaataatc ctggcgcggg ctggcgcgca
     4021 tctccttgag gtcgtggccg gcgcagaagg cgcgcccggc cgccgccagc accacgcagc
     4081 gcacatgcgc atcggcggcg acgtcgtcga gcgccgcctg caacgccgcc agcatcgctt
     4141 ccgacaacgc gttgaactgg gccggccggt tgagggtcag cgtcaccacg ccgtcgtcgt
     4201 cctcgcgcag caggatatcc tcgttggccg cgtgttgcag gctcgcgctc atcgcgcaaa
     4261 ctcctttgtg ccgggtaacg caatacttcc cgttccacgg ccggagcgca agcgagacga
     4321 accacgcctc gcgtctggat gcgatggtgc cccgcccggc tcgcggctgc cgaccgtcca
     4381 actgttggca ggcggcgggc gctcagctca cactgcgtcc tgcgccttcg agtcgagatg
     4441 tagataaacc gaatcgaact cgccggcctt gcagagagcc ggccagtcga ggatgccgag
     4501 agcgccgcgt cgcaattcga tcagcccggc cgaccgcagc tcctgcagcg agcggttcac
     4561 atgcaccgtc gacagtccga gggcatcgcc gatctcggtc tgcgtgatcg ggaactcgca
     4621 ttcgtagccg tcggcgaggc cgatcgcctt gaggcgcagg aagacttcgc acaacatgtg
     4681 cgcgatgcgc gtcacggccg agcgccggcc gatgccgacc atccattcgc ggaagatggc
     4741 ggcgtcgatc agggtgtcgc gccacagcac gtcgccgacg cgcggacagc ggcgcgtcag
     4801 ctcgctgagc gcctcgtgcg gcacgaacgc caccttgcac cgcgtgagcg tcttgacgtt
     4861 gtggtccatc acggcgaggt gcaggctctg caggtccggg atgtcgccag gcgtgtggaa
     4921 cgagaagatc tggcgccggc cgtcctcggt cagcttgtag cggcacacga agccttcgag
     4981 caggatgcag gattgcgagg gacggtcgcc ctcgcgcacg atgtcctggt cggcgtcgac
     5041 cggcacgacc gtgagcggca ggccgcgcag gacttgcatc tcgtcctccg agagcggac
//
LOCUS       DATAIQ010000471         4511 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_334114, whole genome shotgun sequence.
ACCESSION   DATAIQ010000471 DATAIQ010000000
VERSION     DATAIQ010000471.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4511)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4511)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4511
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_334114"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1126)
                     /locus_tag="VHN20_07835"
     CDS             complement(<1..1126)
                     /locus_tag="VHN20_07835"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018407014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HEX2725715.1"
                     /translation="MFGFGDLFGLLLLPLVGAAFILLLRGDNEAVRSNARWAALAATV
                     ATFLLSLYAWRKFDPGSATFQLVESHAWLTETIRFKLGVDGFSMPFVLLTTFLMPFAI
                     AASWKIEHRVKEYMVAFLVLETTMIGVFVALDLVLFYLFFEAGLIPMFLIIGIWGGKR
                     RVYASFKFFLYTLLGSVLMLLAIIAMYWDAGTTDITALLQHKFSRQVQIWLWLAFFAS
                     FAVKMPMWPVHTWLPDAHVEAPTAGSVILAAILLKMGGYGFIRFSLPMFPEASAAFAP
                     LVYALSVVAIIYTSLVALAQEDIKKLIAYSSVAHMGFVTMGLFTMTAQGIQGAMFQMI
                     SHGLVSGALFLCVGVIYDRMHTREISAYGGLVHRMPLYAFV"
     gene            complement(1126..3174)
                     /gene="nuoL"
                     /locus_tag="VHN20_07840"
     CDS             complement(1126..3174)
                     /gene="nuoL"
                     /locus_tag="VHN20_07840"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019403263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HEX2725716.1"
                     /translation="MYQYHAIVFLPLVGFLIAGAFGRLMGARPSEIVTTALLFVSCAL
                     SWYAFVHVGFGTGTTRVQVAQWIMSGDLVADWAFRIDTLTSVMLVVVTTVSALVHLYS
                     IGYMHEDPHRPRFFAYLSLFTFAMLMLVTADNLVQMFFGWEGVGLASYLLIGFWYEKP
                     SANAAAIKAFVVNRVGDFGFALGIFLVFVLFGSVAFEEIFRRVPELAGANFHFLGKDW
                     HALTLACLLLFMGAMGKSAQVPLHTWLPDAMEGPTPVSALIHAATMVTAGVFMVARLS
                     PLFEAAPAAQSVVIVIGAFTAFFAATVGLVQNDIKRVIAYSTCSQLGYMFVGLGVGAY
                     AAGIFHLFTHAFFKALLFLGAGSVIHAMHHEQDIRNMGGLARYIPLTTAAMAIGTLAL
                     TGFPGFAGYFSKDAIIEAAFMSHRPGALFAFLATVIAVFMTSFYSWRLFFLTFTGRPR
                     WAGAHDHHGPVRGTHEGATHGASGHDVSPAPHVPHEHYDGHGDHTPHESPLTMLIPLG
                     VLALGSIVAGFAFKEAFIGHDYDGFWKGVLAAAPDNKIIEEIHHVPAWVALSPALMMV
                     LGFAVAFWFYVANPRVPVEVARQHVSLYRFLLNKWYFDELFDTIFVRPAVRLGRFLWK
                     KGDGWFIDGFGPDGVSARVIEVTRGVVRLQTGYVYHYAFAMLIGVAALMTWYLAGGTH
                     "
     gene            complement(3187..3495)
                     /gene="nuoK"
                     /locus_tag="VHN20_07845"
     CDS             complement(3187..3495)
                     /gene="nuoK"
                     /locus_tag="VHN20_07845"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HEX2725717.1"
                     /translation="MEIGLNHFLVVAAVLFTLGVLGIFLNRKNVIVILMSVELILLSV
                     NINLVAFSTHLNDIVGQVFALFILTVAAAEAAIGLAILVVYFRNRGSIAVEDINMMRG
                     "
     gene            complement(3498..4112)
                     /locus_tag="VHN20_07850"
     CDS             complement(3498..4112)
                     /locus_tag="VHN20_07850"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013652821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HEX2725718.1"
                     /translation="MTVTAAFFYLFASITIASAFMVIAARNPVHSVLFLILAFVNAAG
                     LFLLMGAEFLAMILVIVYVGAVAVLFLFVVMMLDVDFAELRQGYLQYLPIGVLIGCIL
                     LLELVAVVGTWAISPAVLRAPMTAIPPADQVSNTAAIGRVLYTQYFYFFQAAGLVLLV
                     AMIGAIVLTLRERPGVRRQDISRQVARSKETAVELRKVPFREGV"
     gene            complement(4205..>4511)
                     /gene="nuoI"
                     /locus_tag="VHN20_07855"
     CDS             complement(4205..>4511)
                     /gene="nuoI"
                     /locus_tag="VHN20_07855"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003512679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoI"
                     /protein_id="HEX2725719.1"
                     /translation="CIACKLCEAICPAQAITIEAGPRRNDGTRRTTRYDIDMVKCIYC
                     GYCQEACPVDAIVQGSNYEFAVETREELLYDKQKLLDNGARWEREIARNMALDAPYR"
BASE COUNT          961 a         1393 c         1516 g          641 t
ORIGIN      
        1 acacgaaggc gtaaagcggc atgcgatgca cgaggccgcc ataggccgag atctcgcgcg
       61 tatgcatgcg gtcgtagatc acgccgacgc acaggaacag cgcccccgag acgagcccgt
      121 gcgagatcat ctggaacatg gcgccctgga tgccctgcgc ggtcatggta aacagcccca
      181 tggtcacgaa gcccatatgg gcaaccgagg agtaggcgat cagcttcttg atgtcctcct
      241 gcgccagggc gaccagcgag gtgtagatga tcgcgacgac cgacagcgca tacacgagcg
      301 gggcgaaggc ggccgatgcc tcgggaaaca tcggcagcga gaagcggatg aatccgtagc
      361 cgcccatctt gaggaggatc gcggccagga tcaccgagcc ggcggtcggc gcctcgacat
      421 gcgcgtcggg aagccaggtg tgcaccggcc acatgggcat cttcacggcg aacgacgcga
      481 agaaggcgag ccacagccag atctgcacct ggcgcgagaa cttgtgctgc agcagcgctg
      541 tgatgtccgt cgtgccggca tcccaataca tggcgatgat ggcgagcagc atcagcaccg
      601 agccgagcag cgtgtagagg aagaacttga agctcgcgta gacgcgccgc ttgcctcccc
      661 agatgccgat gatcaggaac atcggtatca ggccggcctc gaagaacagg tagaagagca
      721 cgaggtcgag cgccacgaac acgccgatca tggtcgtctc gagcaccagg aaggcaacca
      781 tgtattcctt gacgcggtgc tcgatcttcc acgaggcggc gatggcgaac ggcatcagga
      841 acgtcgtgag cagcacgaaa ggcatggaga agccgtcgac gccgagcttg aagcggatcg
      901 tctccgtgag ccaggcgtgg ctttcgacaa gctggaacgt ggccgagccc ggatcgaatt
      961 tccgccaggc gtagagcgac aggaggaacg tggcgacggt ggcggcgagc gcggcccagc
     1021 gcgcgttgga ccggaccgcc tcattgtcgc cgcgcagcaa caggatgaat gccgccccga
     1081 cgaggggcag cagcagcagt ccgaacaggt cgccaaagcc gaacatcagt gggtccctcc
     1141 ggcgaggtac cacgtcatca gcgctgccac cccgatcagc atggcaaagg cataatggta
     1201 gacgtagccg gtctgcaggc gcacgacgcc gcgcgtcacc tcgatgactc gggccgaaac
     1261 gccgtcaggc ccgaagccgt cgatgaacca gccgtcgcct ttcttccaca ggaagcgccc
     1321 aagccgcacg gccggccgga cgaaaatcgt gtcgaacagc tcgtcgaaat accacttgtt
     1381 gagcaggaat ctgtagaggg acacatgctg ccgcgcgacc tcgaccggga cccgcgggtt
     1441 ggcgacatag aaccagaacg cgacggcaaa gccgagcacc atcatcaatg ccggcgacaa
     1501 ggcgacccag gccggcacgt ggtggatctc ttcgatgatc ttgttgtccg gcgccgcggc
     1561 gagcacgccc ttccagaacc cgtcatagtc atggccgatg aaggcctcct tgaaggcgaa
     1621 gccggccacg atcgagccaa gcgccaggac tcccagcggg atcagcatgg tgagcgggct
     1681 ctcatgcggc gtgtgatctc cgtgcccgtc gtaatgctca tgcggcacat gcggcgccgg
     1741 cgaaacgtcg tggccgctcg cgccgtgggt cgccccttca tgggtgccgc ggaccgggcc
     1801 gtgatggtca tgggcgcctg cccagcgcgg cctgcccgtg aaggtcagga agaacagccg
     1861 ccatgagtag aaggaggtca tgaacaccgc aatcacggtc gccagaaagg cgaacaacgc
     1921 accgggacgg tgcgacatga aggccgcttc gatgatcgcg tccttcgaga agtagccggc
     1981 gaagccgggg aagccggtga gcgccagcgt gccgatcgcc atcgcggccg tggtgagcgg
     2041 gatgtagcgc gccagcccgc ccatgttgcg gatgtcctgc tcgtgatgca tggcatggat
     2101 caccgagccg gctccgagga acagcagcgc cttgaagaag gcgtgcgtga acaggtggaa
     2161 gatgccggcg gcgtaggcgc caacgccgag gcccacgaac atgtagccga gctgggagca
     2221 ggtcgaatag gcgatcacgc gcttgatgtc gttctggacg agaccgacgg tcgccgcgaa
     2281 gaacgcggtg aacgcgccga tcacgatcac cacggactgc gctgccggcg ccgcctcgaa
     2341 cagcggcgac aggcgcgcca ccatgaacac gcccgcggtc accatggtgg cggcatggat
     2401 cagcgccgag accggcgtcg gcccttccat ggcgtccggc agccaggtgt gcagcggcac
     2461 ctgtgccgac ttgcccatgg ctcccatgaa caggaggagg caggcgagcg tcagcgcgtg
     2521 ccagtccttg ccgaggaagt ggaaattggc accggcgagc tctgggacac gccggaagat
     2581 ttcctcgaag gcgaccgagc cgaacagcac gaacacgagg aagatgccga gggcgaagcc
     2641 gaaatcaccg acccggttga cgacaaaggc tttgatggcg gcggcgttgg cggagggctt
     2701 ttcgtaccag aagccgatca ggagatagct ggcgaggccg acgccctccc agccgaagaa
     2761 catctgcacg aggttgtcgg cggtcaccag catcagcatc gcgaaggtga acagcgacag
     2821 gtaggcgaag aagcgcggtc ggtgcgggtc ctcgtgcatg tagccgatcg aataaagatg
     2881 cacgagcgcc gagacggtgg tcacgaccac gagcatgacc gaggtgagcg tatcgatgcg
     2941 gaacgcccag tcggcgacga ggtcgcccga catgatccat tgcgcaacct gcacgcgcgt
     3001 cgttccggtg ccgaatccga cgtggacaaa ggcgtaccac gacagcgcgc acgacacgaa
     3061 cagcagcgcc gtcgtgacga tctcgctcgg ccgcgcgccc atgaggcggc cgaacgcccc
     3121 ggcgatcagg aacccgacga gcgggaggaa gacgatggcg tgatattgat acatgtgggt
     3181 ccggggtcag cccctcatca tgttgatgtc ttcgaccgcg atcgacccgc ggttgcggaa
     3241 atagacgacc aggatggcga ggccgatggc cgcctcagcg gcagcaacgg tcaggatgaa
     3301 cagcgcaaac acctggccga cgatgtcgtt gagatgcgtc gagaacgcca cgaggttgat
     3361 gttgacggag agcaggatca gctcgaccga catcaggatg acgatcacgt tcttgcggtt
     3421 gaggaaaatg ccgagcacgc cgagcgtgaa cagcacggcc gcgacgacca gaaaatggtt
     3481 gagcccgatc tccatgctca cacgccctcc cggaacggca ccttacgcag ttcgaccgct
     3541 gtctccttgc tgcgggcgac ctgcctggag atgtcctgcc gcctgacgcc ggggcgctcc
     3601 cgcaaggtca gcacgatggc gccgatcatg gcgacgagga gcaccaggcc cgccgcctgg
     3661 aagaagtaga aatactgggt gtagaggacg cgcccgatcg ccgccgtgtt ggagacctgg
     3721 tcggccggcg ggatcgctgt catgggcgcg cgcaggacag ccgggctgat cgcccaggtg
     3781 ccaaccacgg cgaccagctc gagcagcagg atgcagccga tcaggacccc gatcggcaga
     3841 tactggaggt agccctggcg cagttccgcg aagtcgacgt cgagcatcat gacgacgaac
     3901 aggaacagca ccgcgaccgc gcccacgtag acgatcacca ggatcatggc caggaactcg
     3961 gcgcccatca gcaggaacag gccggccgca ttcacgaagg ccaggatcag gaacagcacc
     4021 gaatgcaccg gattgcgcgc ggcgatgacc atgaaggccg acgcgatggt gatgctcgcg
     4081 aacaggtaga agaaagcggc ggtgaccgtc atgcgtcctg cttcagccgg gttctcggcc
     4141 catgggtcct gggctgcgcg cgccgtctat aggcgtggaa acgggagcgc acaacaccag
     4201 ggctttagcg atacggcgcg tcgagcgcca tgttgcgcgc gatctcgcgc tcccagcggg
     4261 cgccgttatc aagaagcttc tgcttgtcgt agagaagctc ttcgcgcgtc tcgacggcga
     4321 actcgtaatt cgacccctgc acgatggcgt cgaccgggca cgcctcctgg caatagccgc
     4381 aatagatgca cttcaccatg tcgatgtcat agcgggtcgt gcgccgggtg ccgtcgttgc
     4441 gccgcggtcc cgcctcgatg gtgatcgcct gcgccgggca gatcgcctcg cacagtttgc
     4501 aggcgatgca g
//
LOCUS       DATAIQ010000472         2131 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_440222, whole genome shotgun sequence.
ACCESSION   DATAIQ010000472 DATAIQ010000000
VERSION     DATAIQ010000472.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2131)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2131)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2131
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_440222"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            32..>2131
                     /locus_tag="VHN20_07860"
     CDS             32..>2131
                     /locus_tag="VHN20_07860"
                     /inference="COORDINATES: protein motif:HMM:NF012492.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEX2725720.1"
                     /translation="MHLVGLAEAAGRAGVLHVAGSGRRAGALGRVLREFAPDITVIVF
                     PPWDCLPYDRAPPSRDVMGRRVVALHALVAKCRGPRVVIATPDALVQRVPARECAALT
                     PASLEAGDELGLADLGARLQAIGYELDERVDEPGEAALRGQVVDLFPPGMSAPVRIEH
                     EDGAVVTMRRFDPVSQLTTNAIDRVLLHPAAEYPQAGPAAGEGGGAGWYPDDGARLET
                     LFDYLPDATVVLEAKAEERRRVVLEQIADAYRGRARAAAGEASHAFPPRDRLYLSDPE
                     WDERLRGRRRVLLEDADTDECSGVVPSFAVEPEPVRAFARYVRGELRAKRRVVLAAPT
                     AKSLRTLLRHAAKVTKRKPVHARDWNAVLTTEPGSLVSLEADLDGGFVDDDADVTVIT
                     ATDLLGSRARTGGGDVRSAAALAPADVEFRIGDAVIHVDRGIGLLQGLDTVAAESSVT
                     DMVRLEFAGEDKLMAPVDELNRIWRYGTADQITLDRLDSEVWDKRRARIEGEIVETGR
                     RLTALACERQAKSAPKLVPAGQDYERFVARFPYAETPDQSQAIEDVLGDLASGRPMDR
                     LVCGDVGFGKTEVALRAAAAVALAGKQVAIVAPTTVLVRQHLSTFRRRFAGFDIEVGH
                     LSRLVRPAEARTVKQGLRDGSVRIVVGTHALAGKGIRFKELGLVVIDEEQRFGMAQKA
                     RLRDLAKGVHVLTLTATP"
BASE COUNT          311 a          725 c          766 g          329 t
ORIGIN      
        1 cagtctgcca ccgcgcctgg gagcgctcgc cgtgcacctc gtcgggctgg ccgaagcagc
       61 cggccgcgcc ggcgtgctcc acgtggccgg cagcggccgc cgggcagggg cgctcggccg
      121 cgtcctgcgc gaattcgcac ccgacatcac cgtgatcgtc ttcccgccct gggactgcct
      181 gccgtatgac cgggcgccgc cctcacgcga cgtgatgggc cgccgcgtcg tcgcgcttca
      241 tgcgcttgtg gcgaagtgcc gggggccgcg ggtggtgatc gcgacgcccg acgccctggt
      301 ccagcgcgtg cccgcgcggg aatgcgccgc gctcacgccc gccagcctcg aagccggcga
      361 tgagctcggc ctcgccgatc tcggcgcccg gctgcaggcg atcggctacg aactcgatga
      421 gcgcgtcgac gagcccggag aggcggcgtt gcgcgggcag gtggtcgatc tgttcccgcc
      481 cggcatgtcg gcgcctgttc gcatcgagca tgaggacggc gccgtcgtca cgatgcgccg
      541 gttcgacccc gtctcgcagc tcaccacgaa cgcgatcgac cgcgttctgt tgcatccggc
      601 agcggaatat ccccaggcag ggccggccgc tggcgaaggc ggcggcgccg ggtggtaccc
      661 ggatgatggg gcgcggctcg agacgctgtt cgactatctg ccggatgcga cggtcgtgct
      721 cgaggcgaag gcggaggagc ggcgtagggt ggtgctggag cagatcgccg acgcctatcg
      781 cggccgcgca agggccgccg ctggcgaagc cagccatgcc tttccgccgc gcgaccgtct
      841 ttacctgagc gatccggaat gggacgaacg gctgcgcggc cggcgtcgcg tgctgctcga
      901 agacgccgat acggacgagt gctctggcgt cgttccgtcc tttgccgtcg aacccgagcc
      961 tgtacgcgca tttgcccgct acgtccgggg cgagctcagg gccaaacggc gcgtcgtcct
     1021 cgcggccccg acagcaaagt cccttcgcac gctgctgcgc catgccgcca aagtgacgaa
     1081 gaggaagccg gtgcacgcgc gcgactggaa tgccgtgctg acgaccgagc ccgggagctt
     1141 ggtgtcactc gaggccgatc tcgacggcgg tttcgtcgac gacgatgcgg acgtcacggt
     1201 gataacggcc accgacctgt tgggcagccg cgctcgtaca ggcggcgggg acgtccgctc
     1261 cgccgcggcg cttgcgccgg ccgacgtgga atttcgcatc ggtgacgccg tcatccacgt
     1321 cgatcgcggc atcggcctgc tgcaaggtct cgacaccgtc gctgccgaat cctcggtaac
     1381 cgacatggtc aggctcgaat ttgccggcga ggacaagctg atggcgccgg ttgacgagct
     1441 caaccgcatc tggcgctacg ggacggccga ccagatcacg ctcgaccggc tcgacagcga
     1501 agtctgggac aagcgtcgcg ccaggataga gggcgagatc gtcgagaccg gacgccgcct
     1561 gacggcgctc gcttgcgagc gccaggccaa gtccgccccg aagctcgtcc ctgcgggaca
     1621 ggattacgag cgcttcgtcg cacgctttcc ttatgcggaa acgccggatc agtcccaggc
     1681 gatcgaggat gtgctcggcg atctcgcctc cggccgtccc atggaccggc tcgtctgcgg
     1741 cgatgtcggg ttcggcaaga ccgaggtggc gctgcgtgcg gcggcagccg tggcgctcgc
     1801 cggcaagcag gttgcgatcg tcgctccgac gacggtgctc gtgcgtcagc acctgagcac
     1861 gttccggcgc cgctttgccg gtttcgatat cgaagtcggc catctctcgc ggctcgtgag
     1921 gcctgcggag gcgcgcacgg tcaagcaggg gctgcgcgac ggcagcgtgc gcatcgtggt
     1981 cgggacgcat gcgctggccg gcaagggcat ccgcttcaag gagctgggcc tcgtggtgat
     2041 cgatgaagag cagcgcttcg gcatggcgca gaaagcaagg ctgcgcgatc tggcgaaggg
     2101 cgtccacgtg ctgaccctca cggcgacgcc g
//
LOCUS       DATAIQ010000473         3959 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_117894, whole genome shotgun sequence.
ACCESSION   DATAIQ010000473 DATAIQ010000000
VERSION     DATAIQ010000473.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3959)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3959)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3959
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_117894"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            501..854
                     /locus_tag="VHN20_07865"
     CDS             501..854
                     /locus_tag="VHN20_07865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725721.1"
                     /translation="MSRAPVVVTALMLTLAPNFASANEQAGGVAAGAVTGGVAGAIVG
                     GPVGAAIGAIVGGTVGVAASSPGPDAVVEQPAPPDRRGGRAPVYDPDATGSVLETTCT
                     RDARGMTRCRRQVVQ"
     gene            complement(1002..1484)
                     /locus_tag="VHN20_07870"
     CDS             complement(1002..1484)
                     /locus_tag="VHN20_07870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007611687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YidB family protein"
                     /protein_id="HEX2725722.1"
                     /translation="MARGFPSMTALLGLLAIAGYQNRDKIAEMIGGATGQGGAGSPQG
                     GGQRKVPAGLDNLLGGLGGGGLGGLLGGGLSDLVENFRRAGQGDVADSWVGRGPNKQV
                     TPQNLEQAIGPEVLATLSRETGLSHEELLSRLSRNLPEAVDKYTPDGRIPSEQEWARS
                     "
     gene            complement(1700..3169)
                     /locus_tag="VHN20_07875"
     CDS             complement(1700..3169)
                     /locus_tag="VHN20_07875"
                     /inference="COORDINATES: protein motif:HMM:NF015722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formylglycine-generating enzyme family protein"
                     /protein_id="HEX2725723.1"
                     /translation="MRKAEKLGGAGLAAFILVIGVVWTLLYSRAWLSAPGTHDLSDAQ
                     RTAVLKSALKRGGIAALREAGEMSVLQSEDIAIVGSSRCIGEHECARWVRSTRSFDRC
                     GSVQARLHCAYEITDKAGNTAAGLVQTFRTDVDAPEGLSSDATEWLAEMRTTERPDAD
                     TAKAKLCEMGYCEPGALTKWKKPPRIARADPDAEARKRCNGVLADVVGKGKTCLDPGD
                     AEAREFRDCKDGFCGPVMVALPKGRFTRGTSDAEAERLVGEHPAVKDALSGERPAREV
                     TIGHHVAVGKFEVTFDEWDACHKDARCLAFDRPRDEGWGRGKRPVISVSWNDITRHYL
                     PWLNAKLGLSGAHAYRLLTDAEWEYAARAGTTTRYAFGDAVSTSEAQYLDTAGVAAEA
                     RTTEVGSFRPNAFGLHDMHGNVFEWVEDCFTFMDDAADLPTDGSSRKDGMCLFRAFRG
                     GGYKSGPMLVRSAGRNFNTPDSRMKDVGVRLARTVGARP"
     gene            3390..>3959
                     /locus_tag="VHN20_07880"
     CDS             3390..>3959
                     /locus_tag="VHN20_07880"
                     /EC_number="2.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015822994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0018104 - peptidoglycan-protein
                     cross-linking [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HEX2725724.1"
                     /translation="MRRTAVALFGLACAAAAFATPAAAVYTIDPNTREPIYNYPVYRH
                     GGYRPHRPPAPKSFRSMVDYKGEHAPGTVIVSTKERRLYYVLPDGKAVRYGIGVGREG
                     FTWSGVKTVERKAEWPDWTPPAEMLERQPYLPRFMAGGPGNPMGARALYLGNTVYRIH
                     GTNAPDTIGHAVSSGCFRLVNEQIIDLYER"
BASE COUNT          601 a         1391 c         1318 g          649 t
ORIGIN      
        1 gttgccgccg aggccgcgca gaatgtcgag gcctccgccg accccgctga aggtatcggc
       61 ggcggccgtg ccgttgatgg tctgcgacgc gggagtgagt gtgaacgtgg ccatgccttg
      121 tctccttcac gagcgccaga ggccgccggg cggagagccg cccgaacgcc tcgcaaagaa
      181 gcaatcggcc gcgaaatgcg ttctgtctgt gagccgcgtc acagatcgaa atctacgaac
      241 gtgtatttgc agcgaaacgt ggcgattgcg tgcgccgatg ccgttatgat tggcatgcgc
      301 agccttgttc cttgcagcgc aaaggaaccg gcagttccgg cgaacgttag cgctacggct
      361 ggtgagacgc gccgcctttc aatgagcacg tgcgcgcacg gcgctccaaa ccccggtgat
      421 tgcgcggcct cggaccagca gcggatcgcg tgcgtcctgc atcgctccgt tcgaggcact
      481 gagttctgag gaggtggcgg atgtcacgtg ctcctgtcgt cgtgaccgcg ctgatgctca
      541 ccctggcccc gaattttgcg tcggcgaacg agcaggccgg cggcgttgct gccggcgccg
      601 tcacgggcgg cgtcgccggc gccatcgtcg gcggcccggt cggcgccgcg atcggcgcga
      661 tcgtgggcgg aaccgtcggc gtggccgcca gcagccccgg tccggacgcg gtcgtcgagc
      721 agcccgcgcc gcctgatcgg cgcggcgggc gggcgccggt gtacgacccg gacgccaccg
      781 gcagcgtcct cgagacgacc tgcacgcgcg acgcacgcgg catgacgcgc tgccggcgcc
      841 aggtcgtgca atagacgcgc gggtcgccgc gcattggtcg cacgttccgg gtacaacgtc
      901 attgccgtgg gtgaagcgcg gcaatgacaa gctcaggcgg tgaaagcgta agagtcgggg
      961 ctgtgcggcc ccgacccgaa ttctgtgagg cgatgtagct cttacgagcg cgcccactcc
     1021 tgttcgctcg ggatgcggcc gtcgggggtg tatttgtcga ccgcctcggg caggttgcgg
     1081 gagagccgcg acagcagctc ttcatgcgac aggccggtct cgcgcgacaa ggtcgcgagc
     1141 acctccggcc cgatcgcctg ttcgagattc tgcggcgtga cctgcttgtt cggcccgcgc
     1201 ccgacccatg agtcggcgac gtcgccttgc ccggcgcggc ggaaattctc gaccaggtcg
     1261 ctcaagccgc cgccgagaag cccgccgagg ccgccgccgc ccaatccgcc gagcaggttg
     1321 tcgaggccgg ccggcacctt cctctggccg ccgccctgcg ggctgccagc gccgccctgg
     1381 cccgtcgcgc cgccaatcat ctcggcgatc ttgtcccggt tctggtatcc ggcgatggcc
     1441 agaagcccca gcagcgccgt catcgatgga aatccacgag ccatgtcact cctcctctac
     1501 gtggtggtgg ttacgtggcg tgcgaacgca gcgccgcgtg cgggcacggg aagcgggggt
     1561 gtgcctgccg ttcgttgcct ggtgctgtgc agcagacgca tcggcgccgg caacatgcgt
     1621 catcgcgtgc gcccacgccc cactcctccc gtcacgagcg gaacaacgcg gaaccacgca
     1681 gggagttgca tgaacggcct cacggcctcg cgcccaccgt cctcgccaga cgcacgccga
     1741 cgtccttcat gcggctgtcg ggggtgttga agttgcggcc ggccgagcgg acgagcatgg
     1801 ggccgctctt gtagccgccg ccgcggaagg cgcggaacag gcacatccca tcctttcgcg
     1861 aagatccgtc ggtcggcagg tcggccgcat cgtccatgaa cgtgaagcaa tcctcgaccc
     1921 attcgaagac gttgccgtgc atgtcgtgga gcccgaaggc gttcggccgg aaggacccga
     1981 cctcggtggt cctggcttca gctgcgacgc cggctgtgtc gagatactgc gcctccgacg
     2041 tcgagaccgc atcgccgaat gcgtagcgcg tcgtcgtccc ggcccgcgcc gcgtattccc
     2101 attccgcgtc ggtcaggagg cgataggcat gcgcgcccga cagtccgagc ttcgcgttga
     2161 gccacggcag gtaatggcgc gtgatgtcgt tccacgagac cgagatcacg ggccgcttgc
     2221 cgcgacccca gccctcgtcg cgcggcctgt cgaaggcgag gcaccgggca tccttgtggc
     2281 aggcgtccca ctcgtcgaag gtgacctcga acttgccgac ggcgacatgg tggccgatcg
     2341 tcacctcgcg cgccgggcgt tcgccgctca gcgcgtcttt cacggcagga tgctcaccga
     2401 caagccgctc cgcttcggca tccgaggtgc cgcgcgtaaa acgtcccttg ggcagcgcca
     2461 ccatcacggg gccgcagaaa ccgtccttgc agtcgcggaa ctcgcgcgct tcggcatcgc
     2521 ccgggtcgag gcacgtcttg cccttgccga ccacgtcggc cagcacgccg ttgcagcgct
     2581 tgcgcgcctc cgcgtcggga tcggcccgcg caatgcgcgg cggctttttc catttcgtga
     2641 gcgcgcccgg ctcgcaatag cccatctcgc agagcttcgc cttcgccgtg tccgcatcgg
     2701 gccgctcggt cgtcctcatc tcggcgagcc actcggtcgc gtcggacgac aagccctcag
     2761 gcgcgtcgac atcggtcctg aacgtttgca cgagcccggc ggcggtgttg cccgccttgt
     2821 cggtgatctc gtaggcgcaa tggagcctcg cctgcacgct gccgcagcgg tcaaagcttc
     2881 gtgtgctgcg gacccatctg gcgcattcat gctcgccgat gcagcgggag ctgccgacga
     2941 tggcgatgtc ctcgctctgc agcacggaca tttcgcccgc ctcgcgcagg gcggcgatgc
     3001 cgccccgctt gagcgcgctc ttcagcacgg cggtccgctg cgcgtcgctg agatcatgcg
     3061 tgccgggcgc ggacagccag gcgcgggagt agagcaacgt ccagacgacc ccgatcacca
     3121 ggatgaacgc agcgaggccg gcgccgccga gcttctccgc tttccgcatc tccgtggctc
     3181 actcaggagc ggccagaata ggatcccgaa aagcggacgc cacttttcgg gctcatgcag
     3241 ataatgcggc ctcggtgggt gaggtcaaca cgcaacaccg caacgggatt ttcgtgaggt
     3301 ccttgaccgg ggcgccagcc ggaagccaag cttcacccgt tcctccggac cgggcgtcag
     3361 gtcagcccgg caaccagcgt agaggcacca tgcgtcgtac cgccgtcgcc ctgttcgggc
     3421 ttgcctgcgc cgccgccgca ttcgcgacgc ccgccgcagc cgtctacacg atcgatccca
     3481 acacccgcga gccgatctac aattatccgg tctaccgcca cgggggctac cgcccgcatc
     3541 gcccgccggc gccgaaaagc ttccgctcga tggtggacta caagggtgag cacgcgccgg
     3601 gcaccgtgat cgtctccacc aaggagcggc gcctctatta cgtgctcccc gacggcaagg
     3661 ccgtgcgcta cggcatcggc gtcggccgcg aaggcttcac ctggtcgggc gtcaagacgg
     3721 tcgagcgcaa ggccgagtgg ccggattgga cgccgcccgc cgagatgctc gagcgtcagc
     3781 cctacctgcc gcgcttcatg gccggcggcc ccggcaatcc catgggcgcg cgtgcgctct
     3841 atctcggcaa tacggtctat cgcatccacg gcaccaacgc gcccgacacc atcggccacg
     3901 cggtgtcgtc gggatgcttc cggctcgtga acgagcagat catcgatctc tatgagcgc
//
LOCUS       DATAIQ010000474         6123 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_440231, whole genome shotgun sequence.
ACCESSION   DATAIQ010000474 DATAIQ010000000
VERSION     DATAIQ010000474.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 6123)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6123)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6123
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_440231"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..406
                     /locus_tag="VHN20_07885"
     CDS             <1..406
                     /locus_tag="VHN20_07885"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008198 - ferrous iron binding [Evidence
                     IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="2OG-Fe(II) oxygenase"
                     /protein_id="HEX2725725.1"
                     /translation="IQKVHHFKATRMERYIVSCYAAEDGGHFRPHRDNTTKATAHRRF
                     AVSINLNNDFEGGEVGFPEYGPRSYKAPVGGAVVFSTPLLHAVSPVTKGRRYAFLPFL
                     YDDAAARIREANNAFLGEGIGAYKPGAAAEPA"
     gene            complement(465..1715)
                     /locus_tag="VHN20_07890"
     CDS             complement(465..1715)
                     /locus_tag="VHN20_07890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012331445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX2725726.1"
                     /translation="MDDPDRRGLHAAATPEAGRAPAADARSGTGDVLRLAVAQALAGA
                     NSVVVYATGAVVGNMLAPSKALATLPVSIFVVGMAACTLPAGSIARRHGRRAAFLTGT
                     GCGVLAGLLASIAVVLGSFWLFCAATFFGGAYAAVVLSFRFAAADCVPPERQARALSA
                     VMAGGVFAGVIGPQLVTHTMNLSPPYLFAATFLAQAAVAAISTLVLLGVRLPAPTAAE
                     MSGGRPIGAIVRQPRFISAVICGMVSYLLMNFLMTAAPLAMHLCGLSQEDANLGLQWH
                     VIAMYGPSFFTGRLIARFGAPRVVATGLALTAAGAAVGLTGIDVTHFWLTLILLGVGW
                     NFGFVGASALVLQCHRPEERTRVQSLNDFIVFGTMAVGSFSSGGLLASYGWDTVLWVS
                     FAPLAVAVAALAFGAAPRNVRMAG"
     gene            complement(1952..2407)
                     /locus_tag="VHN20_07895"
     CDS             complement(1952..2407)
                     /locus_tag="VHN20_07895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003528547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1801 domain-containing protein"
                     /protein_id="HEX2725727.1"
                     /translation="MASKRPGKPVKAAAKPVHAGTVLLSGGNPQIAKGYGDAPVQAYI
                     AAMPGWKSDVGRRLDAIIERTVPGVAKAVKWNSPFYGVDGQGWFLSFHVFTRTIKVTF
                     FRDTSLQPVPPGKSKHADVRYLDIHEGELDEAQFADWVKQASLLPGERL"
     gene            complement(2421..2843)
                     /locus_tag="VHN20_07900"
     CDS             complement(2421..2843)
                     /locus_tag="VHN20_07900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018093958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HEX2725728.1"
                     /translation="MKIDGRCHCGLVTYAAEVDPETATICHCTDCQALSGTAFRTSVV
                     AERRDFRLLSGALKTYVKVGDSGRRRAQTFCPTCGSPIYSASADDQTSGYNLRIGTIR
                     QRDRLAPRAQIWCRSAQPWLGKLDQVPGEETEPGAAGN"
     gene            complement(3021..3872)
                     /gene="phhA"
                     /locus_tag="VHN20_07905"
     CDS             complement(3021..3872)
                     /gene="phhA"
                     /locus_tag="VHN20_07905"
                     /EC_number="1.14.16.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014890476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004505 - phenylalanine 4-monooxygenase
                     activity [Evidence IEA];
                     GO_process: GO:0006559 - L-phenylalanine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine 4-monooxygenase"
                     /protein_id="HEX2725729.1"
                     /translation="MDATPESDDPRDWLLDQKHDAYTDTDHATWRTLARRQREVLRGR
                     IAKSFLEGLDHLDIGETGIPDFRRLNARLAAATGWEVVAVPGLVPDLVFFKLLADRKF
                     PAGYWIRKPEQLDYIEEPDVFHDVFGHVPLIMQPVYADYLAAYGRAGLEAAAHDALHR
                     LARVYWYTVEFGLAETPDGLRIVGAGIASSPAESVFALESASPNRVAFALGRVMRTRY
                     RIDDFQETYFVLADANAWPALDMSQLPRLWRELAPLPDLEPGTLVPEDRVLSRGDGTY
                     HRAKPAA"
     gene            4068..4325
                     /locus_tag="VHN20_07910"
     CDS             4068..4325
                     /locus_tag="VHN20_07910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012336378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-finger domain-containing protein"
                     /protein_id="HEX2725730.1"
                     /translation="MADTRIPHFHNDPGVAAIDVGSKEFMCIGARPPFDHPHIFIDMG
                     DDDDAICGYCGTHFRYQPTLAPGAADPAECLWRDREGRVSA"
     gene            4333..5520
                     /locus_tag="VHN20_07915"
     CDS             4333..5520
                     /locus_tag="VHN20_07915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015822687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX2725731.1"
                     /translation="MAPASVAIVGAGIGGLTTALALSARGHAVTLIERRTAFSEAGAG
                     IQLSPNASRVLIDLGLGPALQRAAGEPRRVTIRALSDARVIGQVALGEVMRQRFAAPY
                     YVIHRADLQTILLDAVRARADIRLLVGRRAISIESSPDQATVTTESAGGAYETVQADL
                     VVGADGLRSLARAALGDRRQPVYRGVAAWRATIPHDDAPAALAADETGLWLGRVGHVV
                     HYPVAGGRLLNIVALQRRPEIVDGWSAPGRREELLELFARAAPVVQRLLAVPQDWALW
                     SLFDLPVRRMASARLALLGDAAHPVLPFLAQGGALAIEDAAVLAAALAHNPDDLPTAL
                     AFYAAARRRRARRVQAHARRNGAVFHASGLVALVRDRVIRRLGPDGMAERYAWIYGWT
                     PPG"
     gene            5889..>6123
                     /locus_tag="VHN20_07920"
     CDS             5889..>6123
                     /locus_tag="VHN20_07920"
                     /inference="COORDINATES: protein motif:HMM:NF024140.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MCP four helix bundle domain-containing protein"
                     /protein_id="HEX2725732.1"
                     /translation="MVVLIVALGFSSIMGMRHLDKQISVLAEDWLPGVRDVGTLDTRL
                     MELRLRITRLAMADTPDQLQAADRDVQDGLKRVA"
BASE COUNT          927 a         2171 c         2110 g          915 t
ORIGIN      
        1 gatccagaag gtgcaccatt tcaaggcgac ccgcatggag cgctacatcg tctcctgcta
       61 cgcggccgag gacggcggcc atttccggcc gcaccgcgac aacacgacca aggccacggc
      121 ccaccgccgc ttcgccgtct cgatcaacct caacaacgac ttcgagggcg gcgaggtcgg
      181 ctttccggaa tacgggccgc gcagctacaa ggcgccggtc ggcggcgccg tcgtcttctc
      241 gacgcccctg ctgcatgccg tctcgccggt gacgaagggc cgccgctacg ccttcctgcc
      301 gttcctctac gacgacgcgg ccgccaggat ccgcgaagcc aacaacgcgt tcctcggcga
      361 gggcatcggt gcctacaagc ccggcgcggc ggcggagcct gcataagccg aaacggattg
      421 ccctgacttc cgaaacgcgc aagccgcgtc gctgctcatc gacctcatcc ggccatgcgc
      481 acgttgcgcg gcgcggcccc gaacgcgagc gccgcgaccg cgaccgcgag cggcgcgaac
      541 gacacccaca gcaccgtgtc ccagccgtag ctcgccagca ggcctcctga cgagaacgac
      601 ccaacggcca tcgtcccgaa cacgatgaag tcgttgagcg actgcacgcg cgtccgctcc
      661 tcgggccggt ggcattgcag cacgagcgcc gaggcgccga cgaaaccgaa attccagccg
      721 acgccgagca ggatcagcgt cagccagaaa tgcgtgacgt cgatgccggt cagccccacc
      781 gcggccccgg cggccgtcag ggcgagcccg gtcgcgacca cgcgcggcgc gccgaagcgc
      841 gcgatcagcc gcccggtgaa gaagctcggg ccgtacatgg cgatcacgtg ccactgcagc
      901 ccgagattgg catcctcctg cgatagcccg cacagatgca tcgcgagcgg cgccgccgtc
      961 atcaggaagt tcatgaggag gtacgagacc atcccgcaga tcacggcgct gatgaagcgc
     1021 ggttgccgca cgatcgcgcc gatcggccgc ccgccggaca tctccgctgc ggtcggcgcc
     1081 ggaagccgga cgccgagcag gacgagcgtc gatatggcgg ccaccgcggc ttgcgcgagg
     1141 aaggtggccg cgaacaagta tggcggcgac agattcatgg tgtgggtgac gagctgcggg
     1201 ccgatgaccc cggcgaacac cccgcccgcc atcaccgccg acagcgcgcg cgcctgccgc
     1261 tctggcggaa cgcaatccgc cgcggcgaag cggaacgaga gcacgacggc cgcgtaggcg
     1321 ccgccgaaga acgtcgccgc gcagaacagc cagaacgagc ccaggacgac ggcgatcgac
     1381 gccagcagtc cggcgagcac gccgcatccc gttccggtca ggaacgctgc ccggcgcccg
     1441 tgacggcgcg cgatgctgcc ggccggcaag gtgcaggcgg ccatgcccac gacgaagatg
     1501 gacacgggca gcgtcgccag ggccttgctg ggcgccagca tgttgccgac cacggcgccc
     1561 gtcgcataca cgaccaccga gttggcgccg gccagcgcct gcgcgacggc aagccggagc
     1621 acgtcgcccg tccccgaccg ggcatcggca gcgggcgcgc gcccggcttc cggcgttgct
     1681 gccgcatgca ggccacggcg gtcgggatca tccattgcac tttctcatgc tcggttgtgc
     1741 ttcatcgcgg ggagtccacg ctgcaggact gtgggctccc gccctccatg ccggagcgcg
     1801 tgctgtccgt agcatgtcat tgcgtgggcc cgatctcgag ccgaagacat gaccggcagg
     1861 cgtgcgggac atgagcggcg catcatggcc ggtcgggtct tggacgagcg cttttcaatg
     1921 tccgggcacc cgaccagcgc ggcgcggagc ctcacagccg ttcgccgggc aacaggctgg
     1981 cctgcttcac ccagtcggcg aactgcgctt cgtcgagctc gccttcatgg atgtccagat
     2041 agcgcacgtc cgcgtgcttg gacttgccgg gcggcaccgg ctgcagcgac gtgtcccgga
     2101 agaaggtcac tttgatggtg cgggtaaaga cgtggaacga caggaaccag ccctgaccgt
     2161 cgacgccgta gaacggtgag ttccatttga ccgccttggc tacgccgggg acggtgcgtt
     2221 cgatgatcgc gtcgaggcgg cgtccgacgt cgcttttcca gccgggcatg gcggcgatat
     2281 aggcctgcac gggcgcgtcg ccgtagccct tggcgatctg cgggttgccg cccgagagca
     2341 ggacggtccc cgcatggacc ggcttcgccg cggccttcac cggcttgccg ggtctcttgc
     2401 ttgccatgat cttgcgccga tcagttgccc gctgcgccgg gctccgtttc ttccccgggg
     2461 acttggtcca gcttgccaag ccacggttgc gccgagcgac accagatctg tgcgcgcggc
     2521 gcaagccggt cgcgttggcg gatcgtgccg atgcgcaggt tgtagccgct cgtctggtcg
     2581 tccgcggagg ccgagtagat gggcgagccg caggtcggac agaatgtctg cgcccgccgc
     2641 cggccgctgt cgccgacctt gacgtaggtc ttcaacgcgc ccgacaggag gcgaaagtcg
     2701 cgccgctccg cgacgacgga tgtgcggaac gcagtgcccg agagcgcctg gcaatccgtg
     2761 caatgacaga tcgttgcggt ctcggggtcg acctccgccg cgtaggtgac gaggccgcaa
     2821 tggcagcgtc cgtcgatttt cactgcagcc tcttccgctc gtgttccagg ccagcccggg
     2881 gcgccgcacg tcacgcccgc ctccgcgcac ggcgccgatc ccgtcggcgc cgaggttctc
     2941 acagcctgtc acacctggcc ggccgtgaac aaccgcggcg gctcccgcgg ccccctcccc
     3001 ccgcaatgac gcttaggtcc ttacgcggcc ggcttcgccc ggtggtaggt cccgtcgccg
     3061 cgggacagga cgcggtcctc gggcacgagc gtgccgggct cgaggtcggg cagcggggcg
     3121 agctcgcgcc agagccgcgg cagctggctc atgtcgaggg ccggccaagc gttggcgtcg
     3181 gcgagcacga aataggtctc ctggaaatcg tcgatgcggt agcgagtgcg catgacgcgg
     3241 ccgagcgcga aggcgacgcg gttcggcgag gcgctttcca gcgcgaacac cgactcggcc
     3301 ggcgaggagg cgatgccggc gccgacgatg cgcaggccgt ccggcgtctc ggcgagcccg
     3361 aactcgaccg tgtaccagta gacccgggcg aggcggtgca aggcgtcgtg cgccgccgcc
     3421 tccaggccgg cccggccata cgccgcgagg tagtcggcat aaaccggctg catgatcagc
     3481 ggcacgtggc cgaacacgtc gtggaagacg tccggctcct cgatatagtc gagttgctcg
     3541 ggcttgcgga tccagtagcc ggccgggaat ttgcggtcgg ccagaagctt gaagaagacg
     3601 aggtccggca cgagcccggg cacggccacg acctcccagc cggtcgctgc cgcgaggcgc
     3661 gcgttgagcc ggcggaagtc ggggatgccg gtctcgccga tatcgaggtg gtcgagtcct
     3721 tcgaggaaag atttggcgat tcggccgcgc aggacctcgc gctggcggcg ggcaagcgtg
     3781 cgccaggtgg cgtgatcggt gtccgtgtag gcgtcgtgct tctggtcgag cagccagtcg
     3841 cgcggatcgt cgctctcagg cgtagcgtcc atggcgcctc tccgtcgatc gagcgcccgc
     3901 gaagacaacg cgcagccctg gcgcggctgt tccgtggcgc gctgccgcgg ctcggcgaat
     3961 gccgttgcga tcgcgtccgc aggggcgatg gacgtggaaa cgccctagcc caccggcgcg
     4021 cgggccatta tggtgcgccg ctttccaaaa gggtccgaac cagacagatg gccgacacac
     4081 gcatcccgca tttccacaac gaccccggcg tcgccgccat cgacgtgggc tcgaaggagt
     4141 tcatgtgcat cggcgcgcgg ccgcccttcg accacccgca catcttcatc gacatgggcg
     4201 acgacgacga cgccatctgc ggatattgcg gcacgcattt ccgctaccag ccgaccctgg
     4261 cgccgggcgc cgccgacccg gccgaatgcc tgtggcgcga tcgggaaggc cgcgtgagcg
     4321 cttaagcccg acgtggctcc cgcctcggtc gcgatcgtcg gagccggcat cggcggtctg
     4381 acgacggcgc tggcgctcag cgcgcgcggc cacgcggtca cgctgatcga gcggcgcacc
     4441 gccttcagcg aagccggcgc cggcatccag ctctccccga atgccagccg cgtcctgatc
     4501 gatctcgggc tcggccccgc cctgcagcgc gccgccggcg agccgcggcg cgtgacgatc
     4561 cgcgcgctgt ccgacgcgcg cgtcatcggg caggtggcgc tgggcgaggt catgcggcag
     4621 cgtttcgccg cgccctatta cgtcatccac cgcgccgacc tgcagacgat cctgctcgat
     4681 gccgtgcgcg cccgcgccga catccgcctt ctcgtcggcc ggcgcgccat cagcatcgag
     4741 agcagccccg accaggcgac cgtgacgacg gagagcgccg gcggcgccta cgagaccgtg
     4801 caggcggacc tcgtcgtcgg cgccgacggc ctccgttcgc tggcgcgcgc cgccctcggc
     4861 gaccgccgcc agccggtcta tcgcggcgtc gccgcgtggc gcgcgacgat cccgcatgat
     4921 gatgcccccg ccgcgcttgc cgccgacgag accggcctgt ggctcggccg cgtcgggcat
     4981 gtcgtgcatt atccggtcgc cggcggacgc ctcttgaaca tcgtcgccct gcagcgccgc
     5041 cccgagatcg tcgacggctg gtcggcgccg ggccggcgcg aggagctttt ggagcttttc
     5101 gcgcgcgcgg cgccggtcgt gcagcggctg ctcgccgttc cgcaggactg ggcgctgtgg
     5161 tcgctgttcg acctgccggt gcgccgcatg gcgagcgcga ggctggcgct gctcggcgac
     5221 gcggcgcacc cggtgctgcc gttcctggcg caaggcggcg cgctcgccat cgaggacgcg
     5281 gccgtgctcg cggcggcgct cgcgcacaat ccggacgatc tgcccacggc gcttgcgttc
     5341 tacgcggcgg cccggcgccg gcgcgcgcgg cgcgtccagg cgcatgcgcg ccgcaacggc
     5401 gccgtcttcc acgcctccgg cctcgtcgcg ctcgtgcgcg accgcgtcat ccgccgtcta
     5461 ggccccgacg ggatggccga gcgctacgcc tggatctacg gctggacacc gcctggttga
     5521 cggggtgcct gtgccgtggg cgcggcaggc cggcccagcg gtgacgttcg cacgtcccgc
     5581 ggcctgatgc ggaacgcgag cgctgtgtcc catgccccga gaactgacgg accaccgata
     5641 cagtggcgca aacgctagca ctcacgcgtg aatgctgatg ctgcctgcaa gttttcctct
     5701 ggcgaagaag catctctcgc cctttttgcg caacgacgag ccatagttaa ccggatgaca
     5761 atgcaaggtg atcgaaattt gcacccggcc agtgggtcac tgtgcctttc agcatgactg
     5821 cagtggagat cctgatgtct ttccgggcgc tgtcgattcg cgcgaagctc gtcgcagcat
     5881 tttctcttat ggtcgttctt atcgtggcgc tcggcttctc cagcatcatg gggatgaggc
     5941 atctcgacaa acagatttcg gtccttgccg aggactggct tccgggcgtg cgcgacgtcg
     6001 gcacgctcga tacgaggctc atggagcttc gtctcaggat cacgcgcctc gccatggccg
     6061 atacgccgga ccagctgcaa gcggccgacc gcgacgtcca ggatgggctc aagcgcgttg
     6121 ccg
//
LOCUS       DATAIQ010000475         1730 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_150307, whole genome shotgun sequence.
ACCESSION   DATAIQ010000475 DATAIQ010000000
VERSION     DATAIQ010000475.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1730)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1730)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1730
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_150307"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..415)
                     /locus_tag="VHN20_07925"
     CDS             complement(<1..415)
                     /locus_tag="VHN20_07925"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEX2725733.1"
                     /translation="MSVPDLERLFTEHAQALFGFLAYRVGDRTVAEDLLGDTFERVVK
                     SRQRFNADRGSEKTWIYTIALNCLRDHLRRESAEGRALNRAGTDDGHLQERALDRIGE
                     RDELLRALGALEPAEREVVALRYGADLRLQDIAQVT"
     gene            551..1048
                     /locus_tag="VHN20_07930"
     CDS             551..1048
                     /locus_tag="VHN20_07930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725734.1"
                     /translation="MNRLESDDLPPELSELGERLTAERPVADDHALDSVMSRAQSVSR
                     PRKSLMWRSSAPKARRKSLALAIAGVMATAGIGGLAVAGAGAVDSNPPPPVVTSCPNI
                     GDMFLVGVVAQLGDTVQGGEVVAVDVTIGNLVGVCIRIGDLNGFSANNILVKLNALGI
                     KINLP"
     gene            complement(1157..>1730)
                     /locus_tag="VHN20_07935"
     CDS             complement(1157..>1730)
                     /locus_tag="VHN20_07935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725735.1"
                     /translation="NGCVQAHWDTARVHARRLAILAAIGRRRLIAVVGGAVITGVAVG
                     YIAGQLLDGGRSEPLRPLPAAEAPRLDPTIRRGVLQPARSASGKRRRRARVSLTVSLR
                     NATGSRSEAIPAPALLVGTDWIRVDPAAVTRARGLLKPIQARQTATGVLRFETAGSVT
                     AHLARTRRTKLRIAGRTLNVSLSAPSNSSG"
BASE COUNT          292 a          587 c          575 g          276 t
ORIGIN      
        1 cggtgacctg tgcgatgtcc tgcaggcgta ggtccgcccc atagcgcaga gccacgactt
       61 cgcgctcggc aggctccagt gcgcccaggg cgcgaagcag ctcgtcgcgc tccccgatcc
      121 ggtcgagcgc tcgttcctga aggtgaccat cgtccgtgcc ggcgcggttg agcgcgcgac
      181 cctccgcgct ctcgcggcgc aggtgatcgc gcaggcagtt cagcgcgatc gtgtagatcc
      241 acgtcttctc gctgccccga tcggcgttga agcgctgccg ggacttgacg acgcgctcga
      301 acgtgtcgcc gagcagatcc tccgccacgg tgcgatcacc aacgcggtac gccaagaagc
      361 cgaagagcgc ctgggcgtgt tcggtgaaca gccgctccag atcagggacg ctcatcgcgt
      421 gatcatccag catccttgca agtaaggccg aacggcggca acgaagacaa gatctttcag
      481 cattcggcca gcgggcgcaa caatttcgcg cgacgagttg agttttgcca acgtcgtccg
      541 tatcagaggc atgaatcgac tcgaatctga tgatctgccg cccgagctca gcgagctcgg
      601 cgagcgcctg accgccgagc gcccggtcgc agacgaccac gcgctcgaca gcgtcatgag
      661 ccgcgcacag tccgtgagcc ggccgcgcaa gtccctgatg tggcgctctt cagcgccgaa
      721 ggcccgcagg aagagcctcg cgctcgccat cgccggagtc atggcgacgg ctggcatcgg
      781 cggcctcgcc gtggccgggg ccggcgccgt ggacagcaac ccgccgccgc ccgtggtcac
      841 ctcgtgcccg aacatcgggg acatgttcct cgttggcgtg gttgcccagc tgggcgacac
      901 cgtgcagggc ggagaggtgg ttgccgtcga cgtgacgatc ggcaatctcg tcggtgtctg
      961 catcaggatc ggggatctca acggcttcag cgccaacaac attctcgtca agttgaacgc
     1021 gctcggaatc aagatcaacc tgccatagcc ctgatctcgt agcagagctc agtattcgtg
     1081 ttgatgggag gagcgcccga gagggcgctc ttctcgttaa ggatccgagc cgcccaacat
     1141 cgaggcaggc tgtgcctcaa ccgctcgaat tcgatggcgc tgatagggaa acattgagcg
     1201 tgcggccggc gatgcgcagc ttggtcctgc gcgtccgggc aaggtgggcg gtcacggacc
     1261 cggcggtctc gaagcgcagc acgccggttg cggtctgccg cgcttggatc ggcttcagca
     1321 atccgcgggc gcgcgtgaca gccgcgggat cgacgcggat ccagtcggta cccaccagta
     1381 gcgccggagc cggtattgcc tcacttcggg agccggtcgc gttgcgcagg ctcacagtaa
     1441 ggctcacacg agcccgccgc cgccttttcc ctgacgctga ccgggccggc tgcagcaccc
     1501 cgcgccggat ggtggggtcc aaccgcggtg cctcggccgc cggcagcggc cgcaacggct
     1561 cggagcgccc gccgtccagc aactggccgg cgatgtatcc caccgcgacg ccggtgatga
     1621 ccgcgccgcc cacgacggcg atgagtcgac gccggccgat cgctgccagg atggcaagac
     1681 gacgggcatg cacgcgcgca gtatcccagt gtgcctgcac gcaaccgttc
//
LOCUS       DATAIQ010000476         1509 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_24908, whole genome shotgun sequence.
ACCESSION   DATAIQ010000476 DATAIQ010000000
VERSION     DATAIQ010000476.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1509)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1509)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1509
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_24908"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..401)
                     /locus_tag="VHN20_07940"
     CDS             complement(<1..401)
                     /locus_tag="VHN20_07940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725736.1"
                     /translation="MPSLILLAPDLCAATTADSQNGFVTCARSRSGGADARVMRPGSQ
                     DDGFENRFDLGEEHEARGRLDDRPMALLGRHDFHDVADGVADRSVLARRGGERVACTR
                     RQYDELCARCQIDPWHEWLHSFDARGVAAAD"
     gene            388..1185
                     /locus_tag="VHN20_07945"
     CDS             388..1185
                     /locus_tag="VHN20_07945"
                     /EC_number="3.6.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018391384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase"
                     /protein_id="HEX2725737.1"
                     /translation="MSDGTRRFRTLFISDVHLGTRGCQSRLLLDFLRHVEADTIYLVG
                     DIIDGWQLRKNWFWPQQHNDVVQKLLRKGRKGARLIYIPGNHDEFLRDYLGTHFGGIE
                     VVEAAIHHAADGRRYFVVHGDAFDIVVRHARWLALLGDSAYAAALIVNAHLNRVRRRL
                     GLTYWSLSQWAKLKVKNAVNFIGEFEHALVVEAKQRGVDGVICGHIHHAPMHDRLGLR
                     YINCGDWVESCTAVAETHGGRFILIRWPGDIEIAPPPDVFADASVAA"
     gene            1185..>1509
                     /locus_tag="VHN20_07950"
     CDS             1185..>1509
                     /locus_tag="VHN20_07950"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007600810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX2725738.1"
                     /translation="MRLLIATDAWHPQLNGVVRSLTETAAALKACGVDVAFVTPCQFR
                     GFPLPSYPEIKIAMVRASEVAPRLSECDALHIATEGPLGLAARRSCLARNLKFTTSYH
                     TRFPEY"
BASE COUNT          268 a          515 c          459 g          267 t
ORIGIN      
        1 tcatccgcgg ctgctacgcc ccgcgcgtcg aacgaatgga gccactcatg ccacggatcg
       61 atctggcagc gcgcgcaaag ctcgtcatac tgccttcgcg tgcaggccac gcgctctcct
      121 cctcggcgcg ccaggacgga acggtcggcg acgccgtccg ccacgtcatg gaagtcatgc
      181 ctcccgagga gcgccatcgg gcggtcatcc agacgcccac gcgcctcatg ttcttctccg
      241 agatcgaagc ggttttcgaa accgtcgtct tgcgatcccg ggcgcataac ccgtgcatcg
      301 gcgccgcctg accgcgaacg cgcgcaagtc acaaaaccgt tttgagaatc agctgtcgtc
      361 gcggcgcata aatcgggggc aagcaagatg agcgacggca cgcgccgctt ccgcacgctg
      421 ttcatttcgg acgtgcatct cgggaccaga ggatgccaga gccgtttgct gctggacttc
      481 ctgcgacacg tcgaggccga caccatctac ctggtaggcg acatcatcga cgggtggcaa
      541 ctcaggaaga actggttctg gccgcagcaa cacaacgacg tcgttcagaa gctgctgcgc
      601 aaaggccgca agggcgcacg cctgatctat attcccggca atcatgacga gttcctgcgg
      661 gattacctcg gcacccattt cggcggcatc gaggtcgtcg aagcagccat tcaccatgcc
      721 gccgacggcc gccgctactt cgtcgtgcac ggcgacgcct tcgacatcgt cgtccggcac
      781 gcgcgctggc tggcgcttct cggcgactcc gcttacgcgg cagcgctcat cgtcaatgcc
      841 catctgaacc gggtgcggcg ccggctcggg ctgacctact ggtcgctctc gcaatgggcg
      901 aagctgaagg tcaagaatgc ggtgaatttc atcggcgagt tcgagcatgc gcttgtcgtc
      961 gaagccaagc agcggggcgt cgacggcgtg atttgcgggc acatccacca tgcgccgatg
     1021 catgaccggc tcgggcttcg ctatatcaat tgcggcgact gggtcgaaag ctgcacggcg
     1081 gtcgccgaaa cgcacggcgg caggttcatc ctgatccgat ggccgggaga tatcgagatc
     1141 gccccgccgc ccgacgtctt cgccgacgcc agcgtcgcgg cgtgatgcgc ctcctgatcg
     1201 ccactgacgc ctggcacccg cagctcaacg gcgtcgtgcg ctcgctgacc gagaccgccg
     1261 cggcactcaa ggcgtgcggc gtcgacgttg ccttcgtcac gccatgccag tttcgcggct
     1321 tccccctgcc ctcgtatccg gaaatcaaga tcgccatggt gcgggcgtcg gaagtcgcgc
     1381 caaggctctc cgaatgcgac gcgttgcaca tcgccacaga ggggcctctg ggactcgcgg
     1441 cgcggcggtc ctgcctcgcg cgcaatctga aattcacgac cagctaccat acccgctttc
     1501 cggaatatc
//
LOCUS       DATAIQ010000477         1773 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_24915, whole genome shotgun sequence.
ACCESSION   DATAIQ010000477 DATAIQ010000000
VERSION     DATAIQ010000477.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1773)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1773)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1773
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_24915"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..430)
                     /locus_tag="VHN20_07955"
     CDS             complement(<1..430)
                     /locus_tag="VHN20_07955"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEX2725739.1"
                     /translation="MKTLLRTALAALVASGLGVMAGAATAQGWPTKPVRIIVPYAPGG
                     SADTLGRIAAEHLTEAFKQQFIVENKPGAGGVLGSTQVARAPADGYTLGVSGIATHTI
                     APAINPNVSYDPIKDFTHIALLGGPPIVYVLHPSVKANTLK"
     gene            complement(519..>1773)
                     /locus_tag="VHN20_07960"
     CDS             complement(519..>1773)
                     /locus_tag="VHN20_07960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016552143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HEX2725740.1"
                     /translation="NLPGEASSVVTCLDGYQMARQGRAGPALAVAALCSLFAGCVATL
                     ILAAFAPPLARWALLFGPADYFSLVLLGLVLAVVLAQGSLVPAFGMIAIGILLGLVGA
                     DVNTGAERLTFGLIELSEGVDFVPLAMGLYAIPEIVRNLERPEHRTVLAGKVHGLWPT
                     REDFRRATPATLRGTAVGSVLGILPGSGSLLASFSAYMLEKQVSRRRDEFGKGAVEGV
                     AAPEAANNAHAQTSFIPLLTLGIPANAVMALMAGALTIQGIRPGPEVMTARPDLFWGV
                     IASMWIGNLMLVIINLPLIQMWVALLKVPYRLLYVAILAFCCVGVYSVHNSWFEVLEL
                     IVFGLAGYAFAKWNLEPAPLLLAFILGPMLEENLRRAMLVANGDPSVFVTRPISLVLL
                     IVAAVMIVIVSLPKVRQRRDEALQE"
BASE COUNT          309 a          572 c          628 g          264 t
ORIGIN      
        1 ccttgagcgt gttcgccttc acggacgggt gcaggacgta gacgatcggc gggccgccga
       61 gcagagcgat atgcgtgaag tccttgatgg gatcgtagct gacattgggg ttgatcgccg
      121 gcgcgatggt atgcgtcgca atgccggaca cgccgagcgt gtatccgtcc gcaggcgcgc
      181 gggcgacttg cgtcgagccg agcacgccgc cggcgcccgg cttgttctcg acgatgaact
      241 gctgcttgaa cgcctcggtc aggtgctcgg cggcaatgcg tccgagcgtg tcggcgcttc
      301 cgcctggggc gtagggcacg atgatgcgga cgggcttcgt cggccagccc tgggcggtgg
      361 cggcgccggc catgacgccg aggccggacg cgacgagcgc ggccaatgcc gttctcagca
      421 aggttttcat caggttcctc cgttgtctct ttcggttcgc cggcaattcg ccgtaagcgg
      481 gccgggaagt caacggcggc gctgatctgc ccttccggtc actcctgcag cgcctcatcg
      541 cgccgttgcc gcactttcgg cagcgacacg atgacgatca tgaccgcggc gacgatcagc
      601 agcacgaggc tgatcggccg cgtcacgaag accgacgggt ccccgttcgc gaccagcatc
      661 gcccggcgca ggttctcctc gagcatcggc ccgaggatga aggcgagcag cagaggggcc
      721 ggctcgagat tccatttggc gaaggcgtag ccggccaggc cgaacacgat cagttccagg
      781 acctcgaacc agctgttgtg gacgctgtaa acgccgacgc agcagaaggc gaggatggcg
      841 acgtagagca gccggtacgg caccttgagg agcgccaccc acatctggat cagcggcagg
      901 ttgatgatga cgagcatgag gttgccgatc cacatgctgg cgatcactcc ccagaacagg
      961 tccggccgtg ctgtcatgac ctcggggccg ggtcggatcc cctggatggt cagggcgcct
     1021 gccatgagcg ccatcacggc attggccggg atgccgaggg tgaggagcgg gatgaacgag
     1081 gtttgcgcgt gggcgttgtt cgccgcttcc ggcgcggcga ccccttcgac ggcgcccttg
     1141 ccgaattcgt cgcgccgacg ggaaacctgc ttctcgagca tgtaggccga gaaggaggcg
     1201 agcagcgatc cgctgcccgg caggatgccg agcaccgaac cgacggccgt gccgcgcaag
     1261 gttgccggtg tggcccgccg gaaatcctcc cgcgttggcc acagcccgtg aacctttccg
     1321 gcgaggacgg tgcggtgctc cggccgctcg agattgcgca cgatctcggg gatcgcatag
     1381 aggcccatcg ccagcggcac gaaatcgacc ccttcgctga gctcgatcag gccgaaggtc
     1441 aggcgctccg cgccggtatt cacgtcggct ccgaccaagc cgaggaggat gccgatcgcg
     1501 atcatgccga aagccggaac caggcttccc tgcgccagca ccaccgccag gaccagcccc
     1561 agcaggacga gggagaaata atcggccggg ccgaacagca gcgcccagcg ggcgagaggc
     1621 ggcgcgaagg cggcgaggat cagggtcgcg acgcagccgg cgaacagcga gcagagcgcc
     1681 gccacggcaa gcgccggccc ggcgcgaccc tggcgcgcca tctggtagcc gtcgagacag
     1741 gtcacgaccg aggaggcttc gccgggcagg ttg
//
LOCUS       DATAIQ010000478         4426 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_150350, whole genome shotgun sequence.
ACCESSION   DATAIQ010000478 DATAIQ010000000
VERSION     DATAIQ010000478.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4426)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4426)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4426
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_150350"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            142..1053
                     /locus_tag="VHN20_07965"
     CDS             142..1053
                     /locus_tag="VHN20_07965"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012320973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEX2725741.1"
                     /translation="MASDRLGPEKGATAQHPLPVSAPPRAPAAAPAAGAALPLSVFII
                     TLNEADRIGETIRAVRDLTDDLVVVDSGSTDGTQGIAESLGARVIFNAWPGYGPQKRF
                     AEEQCRHAWLLNVDADEVVPPTLAAEIQNLFAGGEPPRDAYRIGITEIFPGEGRPHPW
                     AYTLRPVRLYRKDKGRYVMSLVHDRVALEPGARVGRLKGALHHFSVRSLGDQIDKLNR
                     YSDEQTQDLHLRGVSIGTWRLFVEFWAAFIKAYFGRRHFVRGVYGFLTAMNYAIARHL
                     RLAKYYERRRLEANGNGRNGGVRRNPP"
     gene            1200..1292
                     /locus_tag="VHN20_07970"
     tRNA            1200..1292
                     /locus_tag="VHN20_07970"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1234..1236,aa:Ser,seq:gct)
     gene            complement(1336..2520)
                     /locus_tag="VHN20_07975"
     CDS             complement(1336..2520)
                     /locus_tag="VHN20_07975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004125765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS481 family transposase"
                     /protein_id="HEX2725742.1"
                     /translation="MPWKERSVMEERLRFVARRLEGEAMTDLCREFGISRKTGYKIFD
                     RYKEHGLAAFSDRSRRPVRYANQLPHQVESLIVSLKREKPHWGARKIRELLLRRLRCE
                     VRVPAKSTIHAVLDRHGLVARLDKRRNRATGTPLSDGAAPNDLWCADFKGEFKLGNGR
                     YCYPLTVTDHASRFVLLCEALESTREELAFTAFERLFDERGLPDAIRSDNGVPFASPN
                     ALFNLSKLAVWWLRLGIAIERIKPGKPQQNGRHERMHLTLKKEATRPPGMNSLQQQAR
                     FDSFVREFNGERPHEALAMRCPAEIYRSSQRPYRGLAELAYPLHDRDVLVTTCGRICL
                     HRKKINISTVLAGQKVGIKEVDDGIWLVSFIDYDLGYIDLEQKTLQPLDNPLGPSLLP
                     MS"
     gene            complement(2619..2879)
                     /locus_tag="VHN20_07980"
                     /pseudo
     CDS             complement(2619..2879)
                     /locus_tag="VHN20_07980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007695260.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
     gene            3381..>4426
                     /locus_tag="VHN20_07985"
     CDS             3381..>4426
                     /locus_tag="VHN20_07985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX2725743.1"
                     /translation="MFAPVAASMTAIPAAGSIRERLDGSRLVTWVREHWISLAAAGVL
                     VWIVIVPLAYLIVFSFRSGTAAAPGDWTLANYAFVYTSSLTRDALGNTLIYTTMVATL
                     SMAIAGGLAWLVERTDMPYRGAAWVMILLPIAMPGMLSSMAWILLLGPRTGLINVVLR
                     WCLAPFGYDAPSGPINIYSLEGMIFVESVRGSTTLFLMLVAGFRLMDPALEEAASMSG
                     ARTSYTLRKITLPLMLPMLLATWMYSFIGTLDDFETPLLVGLPAQIYLLPTVIYFTAY
                     LSQSWGLAAAYATIFLLISVFLVVVYHRVVLRRTSQFATVTGKAFRPRQIELGRMRWP
                     ALALVILYFVLAVLL"
BASE COUNT          704 a         1456 c         1459 g          807 t
ORIGIN      
        1 atgtgtgggc ccagcctggg gccgggccga ttacgcggac ctcgcggacg cattaaatcg
       61 ccgtaaggtt cggccggccg ctgggccggg ctgtggccga cgcttgttcc cggcgcggct
      121 ccgtgctgat aacccccagc catggcatca gatcgactcg ggccggaaaa aggcgcgacc
      181 gcgcagcacc cgctgccggt ttcggcgccc cctcgcgccc ctgcggccgc gccggccgcc
      241 ggcgcggccc tgccgttgtc cgtgttcatc atcaccctca acgaggccga ccgcatcggc
      301 gagacgatcc gggctgtccg cgacctcacc gacgacctcg tcgtggtcga ttcagggtcg
      361 accgacggca cgcaaggcat cgccgagtcg ctcggcgccc gcgtcatctt caatgcctgg
      421 ccgggctacg ggccgcaaaa acgcttcgcc gaggagcagt gccggcacgc gtggctgctc
      481 aacgtcgacg ccgacgaggt cgtccccccg accctcgcgg ccgagatcca aaacctgttc
      541 gcgggcggcg agccgccccg ggacgcctac cgcatcggca tcaccgagat ctttccgggg
      601 gaggggaggc cgcacccgtg ggcctatacg ctccggccgg tgcggctcta ccgcaaggac
      661 aagggccgct acgtgatgtc cctggtgcac gaccgcgtcg ccctcgagcc cggcgcccgc
      721 gtcggccgcc tcaagggggc gctgcaccat ttctcggtgc gctccctcgg cgaccagatc
      781 gataagctca accgctactc ggacgagcag acccaggacc tgcacctgcg cggcgtctcg
      841 atcggcacct ggcgcctgtt cgtcgagttc tgggccgcct tcatcaaggc ctatttcggc
      901 cgccgccatt tcgtgcgcgg cgtctacggc ttcctcaccg cgatgaacta cgccatcgcc
      961 cggcatctgc ggctcgccaa atattacgag cgccgccgac tcgaggccaa cggcaacggc
     1021 cgcaatggcg gcgtgcggcg caacccgccc tagcgggcgc gccacgggct tccgccgcag
     1081 atcgctccga tctccttgtc gcgcatgatc ttttcggcga ggtcggatcg accggcccgg
     1141 gatcgtgctg cggcttgtca agccgggacg ggtcgggcat agagcacctc cgccggaacg
     1201 gagacgtggc cgagaggctg aaggcggcgg tttgctaaac cgttatacgg tcaaaagccg
     1261 tatcgagggt tcgaatccct ccgtctccgc cacgacctca ctgtccgacc cggacacatg
     1321 ggtgacagat cgttcctaag acataggtaa caagctcggg ccgagcgggt tgtcgagggg
     1381 ctgcaaagtt ttctgctcca gatcgatata gccgagatcg taatcgatga agctgacgag
     1441 ccaaatgccg tcgtcgactt ccttgattcc gaccttctgg ccggccagca cggtggagat
     1501 attgatcttc ttgcggtgca ggcagatgcg cccgcaggtg gtgacgagga cgtcgcggtc
     1561 atgcagcggg taagcgagtt cggccaggcc gcggtagggg cgctgtgagg atcgatagat
     1621 ctcggcaggg cagcgcatgg cgagcgcctc gtgggggcgc tcgccgttga actcgcgcac
     1681 gaagctgtcg aagcgggcct gctgctgcag gctgttcatt ccgggcggac gggttgcctc
     1741 cttcttcaag gtgaggtgca tgcgctcgtg acggccgttc tgctgcggtt tgccgggctt
     1801 gatgcgctcg atggcgatgc cgagcctgag ccaccacacc gcaagcttgg agaggttgaa
     1861 cagggcattc gggctggcaa aggggacgcc gttgtcggag cggatggcgt ctggcaggcc
     1921 gcgctcgtcg aacagccgct cgaaggccgt gaaggcgagc tcttcgcggg ttgattccag
     1981 cgcttcgcac aggagcacga agcgcgaggc atggtcggtg acggtcaggg gatagcaata
     2041 gcggccattg ccgagcttga actcgccctt gaagtcggcg caccagaggt cattgggcgc
     2101 ggcgccgtcg gacaggggcg ttccggtggc gcggttgcgg cgtttgtcga ggcgggcgac
     2161 gaggccgtgg cgatcgagca cggcgtggat ggtgctcttg gccggcaccc tgacctcgca
     2221 gcgcaggcgc ctgagcagga gctcgcggat cttgcgggcg ccccaatgcg gcttctcgcg
     2281 cttgaggctg acgatgaggc tctcgacctg gtgcggcagc tggttggcgt agcggacggg
     2341 ccggcgcgag cgatcgctga aggcggccaa gccatgttcc ttgtagcgat cgaagatctt
     2401 gtagccggtc ttacgggaga tgccgaactc gcggcagaga tcggtcatcg cctcgccctc
     2461 gagacggcgg gcgacgaagc ggaggcgttc ttccatgacg gaacgttcct tccacggcat
     2521 cgacacctcc cgcctgcaaa gggcggaaag tgtcacccat gtctccggaa cgatatgtca
     2581 cctatgtctc gggccgctca caggtccatt ccggtcacga gccgttccct gatcttcggg
     2641 gcgccccaac tgggccgctc gcgcttgagg cggacgatca gcgtctcgac ctgcagcggc
     2701 agctggttgg cgtgacgata aggccggcgc gagcggtcgg tgagcccatc gacgccgcaa
     2761 tcgcgatagc gtctgaggat cttgtagccg gtcttgcgcg agatcgcgaa ctcctcgcac
     2821 agctgcgaca tggcttcgcc gtcgagcacc cgggcgatga acttcacacg ctcgtccatg
     2881 acgtgacact ccttccacgg cacctttgcc tccccgcaaa gggccaagag tgtcacccat
     2941 gtctccggaa tgccgtgtca cccttctctc aggaagggca acataaccac gccaatcact
     3001 tcgattgacg ccgcggccac aggggtcgcc ccatcacgat cccgtcgacg agcgcagtgg
     3061 gtttggtgtt ccccgctcgc ggcattaaac ccggtctttc ccacgctctt gccgcgcctc
     3121 tgacgcccgg tttatcgttc acgatggcag cgtgaaagag actgccgcgt tgcgctcggc
     3181 gcaatagaga ggatcgacgt tcccggacgc ccggcaggtt gactgtccgg acctggaagg
     3241 tcgcgacagc tcgggggcgg aaattccgtg agatccaggt tgcggtcgcc aggtgcagcg
     3301 ggtcttggag caggacatgg tgatgcgcgg ccgatcaggc cagcgctgaa ggacgtttgc
     3361 gcgatcgcgt cgcccgaaac gtgttcgctc ccgtcgccgc ctcgatgaca gcgattccgg
     3421 cggccggcag cattcgagag cggctggacg gctcacggct cgtgacgtgg gtgcgggagc
     3481 attggatcag cctcgctgca gcgggggtcc tcgtgtggat cgtgatcgtc ccgctggctt
     3541 atctgatcgt cttcagcttt cgctccggca ccgccgccgc ccccggcgac tggacgctcg
     3601 ccaattatgc gttcgtctac accagcagcc tgacccgcga cgcgctcggc aacacgctga
     3661 tctacacgac gatggtcgcc acgctcagca tggcgatcgc cggaggcctg gcgtggctcg
     3721 tcgaacgcac ggacatgccg tatcgcggtg ccgcctgggt gatgatcctg ctgcccatcg
     3781 cgatgcccgg catgctgtcc tcgatggcgt ggatcctgct cctcggaccc cgcacgggat
     3841 tgatcaacgt cgtcctgcgc tggtgtctcg cgccgttcgg ctacgatgca cccagtggcc
     3901 cgattaacat ctacagcctg gaaggaatga tattcgtcga gagcgtgcgc ggcagcacga
     3961 cgctcttcct gatgctggtc gcggggttcc gcctgatgga tccggcgctc gaagaagccg
     4021 cgtcgatgtc gggcgcgcgc accagctaca cgctgcgcaa gatcaccctg ccgctcatgt
     4081 tgccgatgct gttggcaacg tggatgtact cgttcatcgg aacgctcgac gacttcgaga
     4141 cgccgcttct cgtcggcctg cccgcgcaaa tctatctgct tccgaccgtc atctacttca
     4201 cggcctacct cagtcagagc tggggcctcg cggccgccta cgcgacgata ttcctgctga
     4261 tttcggtgtt cctggtcgtc gtctaccacc gcgtcgtgct gcgccgcacg agccagttcg
     4321 cgaccgtcac ggggaaagcc ttcaggccgc ggcagatcga gctgggcagg atgcgctggc
     4381 ccgcgttggc gcttgtgatc ctctacttcg tcctcgcggt gctgct
//
LOCUS       DATAIQ010000479         1884 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_118062, whole genome shotgun sequence.
ACCESSION   DATAIQ010000479 DATAIQ010000000
VERSION     DATAIQ010000479.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1884)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1884)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1884
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_118062"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            20..>1884
                     /locus_tag="VHN20_07990"
     CDS             20..>1884
                     /locus_tag="VHN20_07990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725744.1"
                     /translation="MATTITSNNDIVISTPVSDPDAIVVLAGEDGSGSLTITNTGSLT
                     TTNAGSDIILRAGNTTGDISVGGNVSAVDTIDMRAAGTISENIGAALTANSLMIQAGG
                     AVTLVLANNVANLAARLTGAGAFSYNDVDSITITTVAGIDGVSTNNRDIAITTVNGAI
                     NGAQTSAQYEVNAGNATVTLSAGSTGSADNAINFVSGADVRGLGGITLTGDNIQISSS
                     SVDAGTAIATLQPFQAGTLINLGGADAANTLGVADGELDNIGAGIVRVGALISGDMTV
                     TAPISPAGTSTLSLQTGGAIVDGNGAGADITETNLALRAATGIGAADDLNTKVSNLAF
                     SNTTSGNVNILNDGALTIGAVDGLSASSNSGGGTTTITATSPLTFAVNTTSVGSATYT
                     AGETNDGPTGADDLTITGTSAVNVTAGDLTLNAGDDIILQSGAQATASGNVVVTAGSG
                     DLDTIGGIDSTGTIQGGDVSLTALGEIRPGRIIATGTASLTSINEGIRDSNATGPDIV
                     ATNLLADVFRGVGTFLAPPLDTQVSNLEARTVVTGIYINNTGDLTVGGLSPGLSGLDV
                     LSAGDLSLTNAGSITLADTDGPEIVHGASSFGNVTLAANGASADFSVTVDNKAITA"
BASE COUNT          387 a          679 c          568 g          250 t
ORIGIN      
        1 aatcgcagga ggcacggcca tggccacgac gatcacaagc aacaacgaca tcgtcatcag
       61 cacccccgtt tcggatcccg atgcgatcgt ggtgctggcc ggcgaggatg gtagcggcag
      121 cctcaccatt acaaacacgg gcagcctgac gaccacgaac gcgggcagcg acatcatcct
      181 ccgcgccggc aacaccacag gcgacatctc cgtcggcggt aacgtcagcg cggtcgatac
      241 gatcgacatg cgggcggcgg gtaccatcag cgagaacatc ggtgccgccc ttaccgccaa
      301 cagtctgatg attcaggccg gtggcgccgt cacgcttgtc cttgccaata acgtcgccaa
      361 ccttgcagct cggcttacgg gagccggcgc tttttcgtat aacgacgtcg acagcatcac
      421 gatcacgacg gtcgccggga tcgatggcgt atccacgaac aaccgggaca ttgcgatcac
      481 cacggtcaac ggcgcgatca acggcgcaca gacatccgcc caatacgaag tcaatgcggg
      541 caatgccacg gtcaccctga gcgccggctc gacgggcagc gcagataacg cgatcaattt
      601 cgtcagcggc gcggacgtgc gcggcctcgg gggcatcacg ctcaccggcg acaatattca
      661 aatctcttcg agcagcgtgg acgccggaac cgcgatcgcg accctgcagc cgttccaggc
      721 gggaacgctg atcaacctcg gcggcgccga tgcggccaac acgctcggtg tcgccgacgg
      781 cgagctcgac aatatcggtg cgggaatcgt acgcgtcggc gcgctcatca gcggcgacat
      841 gaccgtcacg gcaccgatca gccccgccgg cacaagcacg ctctcgctgc agaccggcgg
      901 cgcgatcgtc gacggcaacg gggccggagc tgacattacc gaaaccaatc tcgccctgcg
      961 cgccgccacc ggcatcggcg ctgcagacga cctcaacacg aaagtgtcga acctcgcctt
     1021 cagcaacacc acaagcggca acgtcaacat cttgaacgac ggcgcgctca cgatcggcgc
     1081 ggtcgacggc ctgagcgcgt cgtcgaactc cggcggcggc accaccacga tcaccgccac
     1141 gagcccgctg accttcgccg tcaacacgac ctcggtcggc agcgccacct acacggcggg
     1201 cgagaccaac gacggcccga ccggcgccga cgacctgacc atcaccggca cgagcgccgt
     1261 caacgtgacc gccggcgacc tcacgctcaa tgccggcgac gacatcatcc tgcaaagcgg
     1321 cgcccaggcg acggcgtccg ggaacgtggt cgtcaccgcc ggctccggcg atctcgacac
     1381 gatcggcggg attgactcca cggggactat ccagggcggg gatgtctcgc tcaccgcgct
     1441 gggcgagatc cgccccggac gaatcatcgc caccggcacg gcgtcgctga ccagcatcaa
     1501 tgagggaatt cgggacagca acgcgaccgg cccggacatc gtcgcgacca accttctcgc
     1561 cgacgtcttc cgcggcgtcg gcacattcct ggccccgccg ctcgacacgc aggtcagcaa
     1621 tctcgaagcc cgcaccgtgg tcacgggcat ctacatcaac aacacgggcg acctgaccgt
     1681 cggcgggttg agccccggcc tgagcggcct cgacgtcctc agcgcgggcg atctcagcct
     1741 gaccaatgcc ggcagcatca ccctagccga cacggacggc cccgaaatcg tgcacggggc
     1801 gagcagcttc ggcaacgtga ccctggccgc gaacggagca agcgcggatt tctccgtcac
     1861 ggtcgacaac aaggcgatca cggc
//
LOCUS       DATAIQ010000480         1975 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_196098, whole genome shotgun sequence.
ACCESSION   DATAIQ010000480 DATAIQ010000000
VERSION     DATAIQ010000480.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1975)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1975)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1975
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_196098"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(238..885)
                     /locus_tag="VHN20_07995"
     CDS             complement(238..885)
                     /locus_tag="VHN20_07995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017277530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase family protein"
                     /protein_id="HEX2725745.1"
                     /translation="MQRLRVHAFAVSLDGYGAGPGQDRDNPLGRGGAALHEWFYPTRT
                     FRKMLGKDAGTTGIDDEFAARGFDNVGAWILGRNMFGPVRGPWPDESWRGWWGENPPY
                     HVPAFVLTNHARAPLEMEGGTVFHFVTDGIEAALARAKEAAGGRDVRVGGGVATIRQY
                     LSARLIDHMHVVASPVVLGSGEALFAGIDLPALGYEVTAHVPSEKATHLVLAKRP"
     gene            1015..1161
                     /locus_tag="VHN20_08000"
     CDS             1015..1161
                     /locus_tag="VHN20_08000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725746.1"
                     /translation="MMRQPSPLGNARLDRIITGLVPVIPIGEAAPFRSGWPYPDQRFA
                     LSWH"
     gene            1181..1402
                     /locus_tag="VHN20_08005"
     CDS             1181..1402
                     /locus_tag="VHN20_08005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725747.1"
                     /translation="MTTMERGRWTAPRAQTVDVFVGDVVAPADRAFFASDFLMATAAR
                     PPIDATLPATSTAAVTHMGHMAFSLSPVL"
     gene            complement(1469..1855)
                     /locus_tag="VHN20_08010"
                     /pseudo
     CDS             complement(1469..1855)
                     /locus_tag="VHN20_08010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017988851.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF899 family protein"
BASE COUNT          302 a          711 c          651 g          311 t
ORIGIN      
        1 cgcgagcccg atgccggcga cgacgagaag aatcgacggc gccgtgtcga ggcgccgcgc
       61 gaccagcgcc acggcgacca gcaccgcgag caggagaagc agcgtctgca gtgtcgccgt
      121 catccgcccc acattgcgtc ccggcgcgac gcgacgcaat gcacgcagcc gtgagcgccc
      181 ggctgcctta cgttcgcctg ccgtcggcgc caggcctcgc gcgccagcgc tccgccgtca
      241 gggccgcttc gcaagcacca aatgcgtcgc cttctccgac ggcacatgcg cggtcacttc
      301 gtaaccgagc gccggcaggt cgatgccggc gaacagcgcc tcgccgctgc cgagcaccac
      361 cgggctcgcc acgacatgca tatggtcgat gagccgtgcg ctcagatatt gccggatcgt
      421 ggcgacgccg ccgccgacgc gcacgtcacg gccgccggcc gcctctttcg cacgcgcgag
      481 cgcggcttcg atcccgtcgg tgacgaaatg aaacaccgtg cccccctcca tctctagcgg
      541 cgcacgcgcg tggttggtca gcacgaaggc gggcacatgg tagggggggt tctcacccca
      601 ccagccccgc cacgactcgt ccggccacgg cccgcgcacc gggccgaaca tgttgcggcc
      661 gaggatccag gcgccgacat tgtcgaaccc gcgtgccgcg aactcgtcgt cgatgccagt
      721 ggtgcccgcg tccttgccga gcatcttccg gaacgtgcgc gtcggataga accattcgtg
      781 cagcgccgct ccgcctctgc ccagcgggtt gtcccggtcc tgtcccgggc ccgctccgta
      841 gccgtcgagc gaaacggcaa acgcatggac gcgcaatctt tgcatggtcg gtctcctgga
      901 cgggcacgtt gcgccgccgg cgcgtcattc cacccgcagt ttatggattc gggttcccga
      961 aattttacgg atccgaccgt aagccaaagc ccggcgcgac accggatgca agcgatgatg
     1021 cgacagccga gcccgctcgg gaatgcgcgc ctcgatcgta tcatcaccgg ccttgtgccg
     1081 gtgatcccga tcggtgaggc ggcgccattc cggtcgggat ggccgtaccc ggatcagcgc
     1141 tttgcgctgt cctggcacta aaggcacacc gaggccggcc atgacaacga tggagcgcgg
     1201 ccgctggact gcgccgcgcg ctcagaccgt cgatgttttc gtcggtgatg ttgttgcgcc
     1261 tgcggatcgc gcgttcttcg catccgactt ccttatggca actgccgcga ggccgccgat
     1321 cgatgcgacg ctgcccgcga caagcacggc cgccgtcacg cacatggggc acatggcctt
     1381 ctccctttct ccggttctct gatcgcggcg ccaggcgtgg cacgaagccg ccgcttgcct
     1441 gcgcgaggcg cgccgagacc ctcgctcatc agcccgcctt gcgctcgtat tcgtcgcggc
     1501 ggcgccacca gacgccgctc tcgttgcgcc cctttggggc gcggtcgagc cactggtaca
     1561 taccccacag gccgtcgagg ccgcgcgaat aggccgagta ggtgtggtag acgacgccgt
     1621 cctcgcgcgc gaaggcgctg aggcccggcc gctcgcgcgt gtaggtggac gcgtcggttc
     1681 ccgacatggc ggcgaagatc gaggagccgg acccttcgcg cggctgccac ggcggctcgc
     1741 gccggtagtt gtagtcgatg ccctggcgct gctgctcctc gctgaaccag acgctgaagt
     1801 cggcgttgaa gtcgccgccg aacgaggacg cccacgggaa cgtccagccc acgcgcatag
     1861 gcggaatagg tgtggtagac gacgccgtcc tcgcgcgcga aggcgctcag gccgggccgc
     1921 tcgcgcgtat acgtcgcttc gtcggttccc gacatggcgg cgaagatggc cgagc
//
LOCUS       DATAIQ010000481         1734 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_334241, whole genome shotgun sequence.
ACCESSION   DATAIQ010000481 DATAIQ010000000
VERSION     DATAIQ010000481.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1734)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1734)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1734
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_334241"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     regulatory      complement(<1..138)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            complement(179..1498)
                     /locus_tag="VHN20_08015"
     CDS             complement(179..1498)
                     /locus_tag="VHN20_08015"
                     /inference="COORDINATES: protein motif:HMM:NF015686.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEX2725748.1"
                     /translation="MAWLFDPASWVGLVTLIVLEIVLGIDNLIFIAIITDKLPQAQRR
                     RARLVGLTLALGMRLILLAGISWMATLTRPLVSVFGFGLSGRQAILLAGGSFLIWKAT
                     TELHERLEGASGMRSGPARHASFWQTVAQIVALDAVFSLDSVITAVGMVDELGVMMAA
                     VVIAVLLMMAASRPLMDFVSAHPTVVILCLGFLLMIGASLGAEGLGFHIPKGYLYAAI
                     SFSVLIEAFNQVAQRNRRRLATSGDLRQRTAEAILRLLGARPAEAATPDLVAAIAASP
                     VREVFAPQERKMVAGVLDLANRDVASVMIPARNVAWLDPDEPEPELRRRILQAAHSRY
                     PVARGGLDNLVGVAVTQDLMCGLLSEGHLRLAGRERVPLVVRDTASVLEAIESLGGSS
                     VQLAVVKGASGKVEGIVTPLDVLKAIMAPSPPAAETAPAQTSPARPE"
BASE COUNT          311 a          583 c          611 g          229 t
ORIGIN      
        1 gtccctccgc cgatacgaat cggatcaggt tcaaagggtt cggcgttcaa agcacggtcg
       61 gcgaaagaga aaccgctttc ggcagtccgt gcctcgatcc ttccgtctca gcccggcagg
      121 gcacccctcg gatggcgtca aaatggggca ggacggcccg cgaagcaagc cccgagggct
      181 actccggccg tgccggcgaa gtctgtgccg gagccgtctc tgccgcggga ggggagggcg
      241 ccatgatcgc cttgagcacg tccagcggcg tcacgatgcc ttcgaccttg ccggacgcgc
      301 ccttgacgac cgccagctgc acggacgagc cgccgaggct ctcgatcgcc tcgaggacgc
      361 tagcggtgtc gcgcaccacg agcgggacgc gctcgcggcc ggcgagacgg agatgaccct
      421 cgctgagcag gccgcacatc aggtcctgcg tgacggccac gccgaccagg ttgtcgagcc
      481 cgccgcgcgc caccggatag cggctgtggg cggcttgcag gatgcggcgc cgcagctccg
      541 gctccggttc gtccggatcg agccaggcga cgtttcgggc ggggatcatc acggaggcca
      601 cgtcgcgatt ggcgagatcg agcaccccgg ccaccatctt gcgctcttgg ggcgcgaaca
      661 cctcccggac cgggctggcc gcgatggcgg caacgagatc gggagtcgcc gcctccgccg
      721 ggcgggcgcc gagaagccgc aggatggcct cggccgtgcg ctgccgcagg tcgccggacg
      781 tcgccaggcg tcggcggttg cgctgagcca cttggttgaa ggcttcgatg agcacggaga
      841 agctgatcgc cgcgtaaagg tagcccttgg ggatatggaa tccgagccct tccgcgccga
      901 ggctcgcccc gatcatcagc aagaagccga gacagaggat gaccacggtc gggtgggccg
      961 agacgaaatc catcagcggg cggcttgcgg ccatcatcag gagcacagcg atgacgacgg
     1021 cggccatcat caccccgagc tcgtccacca tgccgaccgc cgtgatgacg gaatcgagcg
     1081 agaacaccgc atcgagcgcc acgatctgcg ccaccgtttg ccaaaagctc gcgtgacgcg
     1141 ccgggccgga gcgcatgccg ctggcgcctt cgagccgctc gtgcaactcg gtggtcgctt
     1201 tccatatcag gaacgagccg ccggcaagca ggatcgcctg acgtcccgac aggccgaagc
     1261 cgaacacgct gaccagcggg cgcgtcagcg tcgccatcca gctgatgccg gcgagcagga
     1321 tgagccgcat gccgagcgcc agcgtgagac cgaccaggcg ggcgcgccgg cgctgcgcct
     1381 gcggcagctt gtcggtgatg atggcgatga agatgaggtt gtcgatgccg agaacgatct
     1441 cgagcacgat gagggtcacg agaccgaccc acgaggccgg atcgaacagc catgccatca
     1501 cgcgttctcc atcgccacga caggcgcaga tcggaaacgc ccagcctgcg cggtccgggg
     1561 ccgggatcca ccaccataac aatgcgcaag tcgggaaagg gtccgcggga ccgcgagcgg
     1621 cattgcgacc ggtctggacg gggccgccgc tactcgcggc gcagggcctc gatggggtcg
     1681 agccgcgcgg cgcgctgggc cgggtagaag ccgaagaaga tcccgaccag gccg
//
LOCUS       DATAIQ010000482         2023 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_118194, whole genome shotgun sequence.
ACCESSION   DATAIQ010000482 DATAIQ010000000
VERSION     DATAIQ010000482.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2023)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2023)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2023
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_118194"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1388
                     /locus_tag="VHN20_08020"
     CDS             <1..1388
                     /locus_tag="VHN20_08020"
                     /inference="COORDINATES: protein motif:HMM:NF019313.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="P-loop NTPase fold protein"
                     /protein_id="HEX2725749.1"
                     /translation="ERTAKAEAEFAERKRKAAETLRAEETRLREMQAERSQSVEFARS
                     YSLASEGRSREGLLRYFIAYSPELAEVRKKLGIMAAVRRCYETLEQIMREKRDRSTSD
                     TLPAIPEVRRIVVYIDDLDRCSQEHVVQVLQAVHLLLAFDLFIVVVAVDARWLHRAVG
                     RVYRGQLAVPGQATDQIGRATVSDYLEKIFQLPIWMESMATPALVRRYVDGIDTAARE
                     RAGSEDVNAPTSKGSQGSNTITARDTPLDPSLAAAAAAGRATLSENERRTLSAMAPLV
                     GKSPRAVKRLVNTYRLIRVMRGPAGIEDLERGKSGALPLYPFLLFALACEVGLLPQTL
                     EQMGEVVATGRAHTGPSLPLIRCFTPQAGGVELADGEARLRQLLEAEGKLTDVAVALD
                     AALGAADGNVPDPDRAAHAAGAYTSPNAAVEALWRKFSPPDTTGLGRRGNRLADAFAE
                     AARFSFRAAHR"
BASE COUNT          361 a          660 c          666 g          336 t
ORIGIN      
        1 acgagcggac ggcgaaggca gaggcggagt tcgctgaaag gaagcgaaag gccgccgaga
       61 cgctgcgcgc tgaggagacc aggcttcggg agatgcaggc ggaacgcagc cagagcgtgg
      121 aattcgcgcg cagctacagt ctcgccagcg aaggacgctc acgcgagggg ctactgcggt
      181 atttcatcgc gtattctccg gaacttgcgg aagtgcgcaa gaagctgggg atcatggccg
      241 ccgtcaggag gtgctacgaa accctcgagc agatcatgcg ggaaaaacgc gatcgctcca
      301 cgtcggatac acttccagcc atcccggagg tacgccgcat cgtcgtctac atcgacgacc
      361 tcgaccgttg ctcacaggag cacgtggtcc aggtgctgca ggcggtgcac ctgctgctcg
      421 cgttcgatct attcatcgtc gtggttgcgg tcgatgcgcg ctggctgcac cgggcggtgg
      481 ggcgggtata ccgaggccag cttgcagtgc cgggacaggc caccgatcag atcgggcgcg
      541 ccacagtgtc ggactacctc gagaagatat tccagctgcc gatctggatg gaatcgatgg
      601 ccacgccggc gttggttcga cgctacgtcg atgggatcga tacggcggcg cgcgagcgcg
      661 ccggcagcga agacgtcaac gctccaacta gcaagggcag tcagggcagc aacacgatca
      721 cggcgcgtga cacgcccctc gacccttcgc tcgcagctgc cgccgcagcc ggccgagcga
      781 cgctttcgga aaacgagcgg cggacgctat cggcgatggc gcctctcgtc ggcaagtcac
      841 cgagggcggt aaagcggctc gtcaatactt accgcctgat ccgcgtcatg cgcggtccag
      901 ccggcattga ggatctcgag cgcggcaaat caggggcgct tccgctttac cctttcctct
      961 tgttcgcatt ggcctgcgaa gtcgggctgc tgccccaaac gttagagcag atgggcgagg
     1021 tggtcgccac cgggcgagcg catacgggac caagcctgcc cttgatccgt tgctttactc
     1081 cccaagcggg gggcgtggaa ttggcggacg gcgaggcgcg cctgcgccag ttactcgaag
     1141 ccgagggtaa gcttacagac gtggcggtgg cgttagacgc ggcgctcggc gcagcggacg
     1201 gcaacgtgcc cgatccggat cgcgctgctc atgccgccgg cgcatacacg tcgcccaacg
     1261 ccgctgttga ggcgctgtgg aggaagtttt cgcctcctga tacaactggc ctgggccgtc
     1321 gaggcaaccg tcttgcagac gcattcgccg aagcggctcg gttctccttc cgagccgcgc
     1381 atcgttgaag tcgcgctccg cgaatcggct cttaaggagt gcttagctaa aaatgctaag
     1441 gtctccttag cggctcattc agcatcatct ggcccatcga caaccgacag ggtcagaccg
     1501 atgcgcctcc gctccgtaaa tctgggaatt gccctcacgc tcagcctggc ggcgggcgcc
     1561 aaagccgaag accgcccgtt catgcccccg ctcgacgact tgtcctacgg cgccgtgatg
     1621 gtcggcatca gcagcgccga cgcacagccg tcggtcgaag actgggccgc gctgcgcacc
     1681 cctgccaaag ccgaagagcg ctctttcatg ccgccgctcg aggacgtgtc ctatggggcc
     1741 ctgctggtcg ccctcggcag cgccgacgcc ctgcggtccg aagactggtc tggcctgcgc
     1801 actgcggcca aagccgaaga tcggccgtcc acgccgccgc tcgacgactt gtcctatgga
     1861 ggacaggtag gccgacccgc cgcccgcgaa ggatcgctcg gggtcagcgg gcgaggaggc
     1921 cgcggccctt catccaggct tccagcttgt tcgaccagtc ggccgccggc agcccgctct
     1981 tgagggcgag cccgaccccg tgggcgccct tctcgtactc gac
//
LOCUS       DATAIQ010000483         3281 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_25150, whole genome shotgun sequence.
ACCESSION   DATAIQ010000483 DATAIQ010000000
VERSION     DATAIQ010000483.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3281)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3281)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3281
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_25150"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1036
                     /gene="coaBC"
                     /locus_tag="VHN20_08025"
     CDS             <1..1036
                     /gene="coaBC"
                     /locus_tag="VHN20_08025"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018263533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004632 - phosphopantothenate--cysteine
                     ligase activity [Evidence IEA];
                     GO_function: GO:0004633 - phosphopantothenoylcysteine
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0015939 - pantothenate metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HEX2725750.1"
                     /translation="AEIGHIRLAREADLVVVAPATANLMARMAGGHADDLASAVLLAT
                     TLPILIAPAMNVRMWEHPATRRNLATLQSDGVKLVGPNAGAMAEPEHGPGRMAEPLEI
                     VAAIEGMLGSHTVRAPAPAKTAGGLLAGKKVLVTSGPTHEPIDPVRYIANRSSGRQGH
                     AIAKAAAEAGATVTLVSGPVEIADPPGVKTVQVETAHDMLEAVEAALPADIAIFAAAV
                     ADWRVAAPAHHKVKKGEAAPALTLTENPDILATVARRQTGRPQTVVGFAAETENVIDN
                     AKAKLARKGCDLIVANDVTPDLGVMGGDDNTVHLVTADRVETWPTLDKDEVARRLIAR
                     LAAMSGAPRS"
     gene            1033..1485
                     /gene="dut"
                     /locus_tag="VHN20_08030"
     CDS             1033..1485
                     /gene="dut"
                     /locus_tag="VHN20_08030"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004170 - dUTP diphosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006226 - dUMP biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0046081 - dUTP catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HEX2725751.1"
                     /translation="MTVPVPIQRLPHAQGLPLPRYETGDAAGLDLVAANAEAAPMVIE
                     RMGRALVPTGIVLQLPSGFEGQVRPRSGLAFRHGVTVLNSPGTIDADYRGEVQVLLVN
                     LGHEPFTVIRGMRIAQLIIAPITRVSLAESSRLDETKRAEGGFGSTGL"
     gene            1510..1959
                     /locus_tag="VHN20_08035"
     CDS             1510..1959
                     /locus_tag="VHN20_08035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HEX2725752.1"
                     /translation="MFLLPRRALLAIAAVVDIALHARPLPVAAKHLAARHNLPPRHLE
                     TVLQALVRDGILKGVRGPRGGYELARERRRITAAEITRAALSEMLDDHPSAGQSRLVE
                     EVVGPALKQASEAFLEELEHITVEDLCRRAEERAVFGGLPPTVDFAI"
     gene            2121..3110
                     /gene="cysK"
                     /locus_tag="VHN20_08040"
     CDS             2121..3110
                     /gene="cysK"
                     /locus_tag="VHN20_08040"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020179422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004124 - cysteine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HEX2725753.1"
                     /translation="MADTARKRATAEPARVPGRGRIYDSITDTIGDTPIVRLNRIGKD
                     RGIEANLLAKLEFFNPIGSVKDRIGVSMVDALEQTSALKPGGTLIEPTSGNTGIALAF
                     VAAARGYRLILVMPETMSLERRKMLALLGAELVLTPGPQGMRGAIAKAEELRDQIPGA
                     VIPQQFRNPANPEIHRRTTAEEIWNDTNGEIDCFVSGVGTGGTITAVGQVLKARRPSL
                     KVVAVEPEDSPVLSGGQPGPHKIQGIGAGFVPDILDREVIDEVVTVGNQTAFDTARLV
                     AKREGIPVGISSGAAIAAALEIGARPGMAGKNIVVVIPSFAERYISSALFEGL"
BASE COUNT          550 a         1140 c         1102 g          489 t
ORIGIN      
        1 ggccgagatc ggccatatcc gcctcgcgcg cgaggcggac ctcgtcgtgg tcgcaccggc
       61 gaccgcgaac ctgatggcca ggatggcggg cggacacgca gacgacctcg ccagcgccgt
      121 gctgctcgcg accacgctgc cgatcctgat cgcgcctgcc atgaacgtgc gcatgtggga
      181 gcatccggcg acgcgtcgca acctcgccac gctgcagagc gacggcgtca agcttgtcgg
      241 cccgaacgcc ggcgcaatgg ctgaacccga acatggccca gggcgcatgg ccgagccgct
      301 cgagatcgtc gcggcgatcg aggggatgct cggcagccac accgtgcgcg cgcctgcgcc
      361 ggccaagacg gccggcggac tgctcgccgg caaaaaggtt ctcgtcacct cgggtccgac
      421 gcatgagccg atcgatccgg tgcgctacat cgccaaccga tcgtcgggac ggcagggcca
      481 tgccattgcc aaggcggcgg cggaagcagg cgccaccgtg accctcgtgt cggggcccgt
      541 ggagatcgcc gatccgccgg gcgtcaagac cgtgcaggtg gaaacggcgc atgacatgct
      601 cgaggccgtc gaggcggcgc tgcccgccga catcgccatt ttcgcggccg ccgtggcgga
      661 ctggcgcgtc gccgcaccgg cgcaccacaa ggtcaagaaa ggcgaagcgg cgcccgcact
      721 gacgctcacc gaaaacccgg atatcctcgc gacggtggcg cgccgccaga cgggacggcc
      781 gcagaccgtg gtcgggtttg ccgccgagac cgagaacgtc atcgacaacg caaaggcaaa
      841 gctggccaga aagggctgcg acctcatcgt cgccaacgac gtcactcccg atctcggcgt
      901 gatgggcggc gacgacaaca ccgtgcatct cgtaacggcg gatcgcgtcg agacatggcc
      961 cacgctcgac aaggacgagg tggcccgccg cctgatcgcg cgcctcgccg cgatgagcgg
     1021 agcgccgcgg tcatgacggt cccggtgccg atccagagac tgccgcatgc gcaagggttg
     1081 ccgctgccgc gctacgagac cggcgacgcc gccggtctcg acctcgtggc ggcgaatgcc
     1141 gaggccgccc cgatggtgat cgagcgcatg ggacgcgcgc tcgttccgac cgggatcgtg
     1201 ctgcagctgc cgagcggatt tgaggggcag gtccgccccc gttcgggcct ggccttccgg
     1261 catggcgtga ccgtgctcaa ctcgcccggc acgatcgatg cggattaccg cggcgaggtc
     1321 caggtgctcc tcgtcaacct ggggcacgag ccgttcaccg tgatccgcgg tatgcgcatc
     1381 gcgcagctga tcatcgcgcc gatcacgcgc gtgtcgctcg ccgaaagcag ccggctcgac
     1441 gagacgaagc gggccgaggg cgggttcggc tcaaccggat tgtagtgcgc ttaccgaatg
     1501 aggccgccga tgttcctgct cccgcgccgc gcgctcctgg caattgcagc cgtcgtcgac
     1561 atcgcgctgc atgcgcgccc gctgccggtc gcggccaagc atctcgccgc gcgccacaac
     1621 ctgccgcccc gccacctcga aaccgtgctg caagctctcg ttcgcgacgg catcctcaag
     1681 ggcgtgcgcg gcccgcgcgg cggctacgag ctggcgcgcg agcgtcggcg gatcaccgcc
     1741 gccgagatca cgcgcgccgc cctcagcgag atgctcgatg accacccatc agcagggcag
     1801 tcgcggctcg tcgaggaagt cgtcggcccg gccctgaagc aggccagcga ggcattcctg
     1861 gaagagctcg agcatatcac ggtcgaggac ctgtgccgtc gcgccgagga gcgcgccgtg
     1921 ttcggcgggt tgccgcccac cgttgatttc gcaatatgaa cttgtggttc tggacaatca
     1981 tcaccagatc attgaattaa gcgggttatc gccgctcgcg cgggattccg atcccgcgct
     2041 cccgccgatt tcggctcgca cgatcgttcc gccaagtggc tttgccttgc cgggtcgtgc
     2101 tttcacatca ggaggtctgc atggctgata cggcccgcaa gcgcgcgacg gccgagccgg
     2161 cccgggttcc cggccgggga cggatttacg actcgatcac cgacacgatc ggcgacacgc
     2221 ccatcgtgcg cctcaaccgg atcggcaagg accgcggcat cgaggccaac cttctcgcca
     2281 agctcgagtt cttcaatccg atcggcagcg tcaaggaccg catcggcgtc agcatggtcg
     2341 acgcgctcga gcaaaccagc gccttgaagc cgggcgggac gctgatcgag ccgacctccg
     2401 gaaacactgg catcgcgctc gccttcgtgg ctgccgcgcg cggctaccga ctgatcctcg
     2461 tcatgcccga gacgatgtcg ctcgagcgcc gcaagatgct ggcgcttctc ggcgccgagc
     2521 tggtgctcac gccgggtccc caggggatgc gcggtgcgat cgccaaagcc gaggagttgc
     2581 gcgatcagat tcccggcgcc gtgatcccgc agcaattcag gaatcccgcc aatcccgaga
     2641 tccatcgccg caccaccgcg gaagagatct ggaacgacac gaacggcgaa atcgattgct
     2701 tcgtctcggg ggtcggcacc ggcggcacca tcacggcggt gggccaagtg ctcaaggcgc
     2761 gccggccttc cctgaaggtc gtcgcggtcg agccggagga ctcgccggtc ctgtccggcg
     2821 ggcagcccgg cccgcacaag atccagggga tcggcgcggg gttcgtgccg gacattctcg
     2881 atcgcgaggt gatcgacgag gtcgtgaccg tcggcaacca gacagccttc gacaccgcgc
     2941 gtctcgtggc aaagcgcgaa ggcatcccgg tcggtatctc gtccggcgcc gccattgcgg
     3001 ccgcgctcga gatcggcgcg cgccccggca tggccggcaa gaacatcgtc gtcgtgatcc
     3061 cctcatttgc ggagcgctac atctcgagcg ccttgttcga agggctgtga ggtcgtcacg
     3121 cggctccggc cgcgaacaat atgacgcgag ttgcgaggag cggcgttcag ccgctctttt
     3181 tcttgcagac gtgaccgcaa cctcgggcgg cgcggcgggt ttcttccgag aaattcggga
     3241 gacaccgatg gcaagcaagc acgaccgcct ctcgctcaag g
//
LOCUS       DATAIQ010000484         1905 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_394578, whole genome shotgun sequence.
ACCESSION   DATAIQ010000484 DATAIQ010000000
VERSION     DATAIQ010000484.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1905)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1905)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1905
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_394578"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1423
                     /locus_tag="VHN20_08045"
     CDS             <1..1423
                     /locus_tag="VHN20_08045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015931721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="GMC family oxidoreductase N-terminal
                     domain-containing protein"
                     /protein_id="HEX2725754.1"
                     /translation="MFTTAPEPGLNGRSLAYPRGKVIGGSSAINAMIYMRGQAADYDG
                     WRQLGLTGWGWDDVLPFFLKHEDHVDPPNALHRSGGEWRVEHPRVRWDILDAVREAAA
                     AAGIPKIDDFNTGDNEGSSYFQVNQKRGRRWSAARGFLKPALHRPNLRLETGVHVERV
                     LLEGLRATGVAFTRDGERHVARAAGEVILTAGAVASPPILERSGIGDGARLREFGIVA
                     THHLPGVGENLQDHLQLRPVYRVSGVRTLNDDYARLWRRGLMGLSYAALRRGPLTMAP
                     SQLGAFARSSPDYATANLEFHFQPLSLDKWGDGLHPFAAFTASVCNVRPSSRGSVHVT
                     GADALAAPMIQPNYLSTDEDRRVAADALRLTRRIVAQPPLARFNPEEYRPGAHLTSED
                     ELVHAAGEIGTTIFHPVGTARMGPDHDAMAVLDGRLRVRGIAGLRVIDASAMPRITSG
                     NTNSPTIMIAEKGAAMVLDDARR"
BASE COUNT          303 a          648 c          638 g          316 t
ORIGIN      
        1 gatgttcacg acagcgcccg aacccgggct caacggccgt tccctcgcct atcctcgggg
       61 caaggtgatc ggcggctcgt cggccatcaa tgcgatgatc tacatgcgcg ggcaggcagc
      121 cgattacgac ggctggcgcc agctcggctt gaccgggtgg ggctgggacg acgtgctgcc
      181 cttttttttg aagcacgagg accacgtcga tccgcccaac gcgctgcacc gcagcggcgg
      241 tgaatggcgg gtcgagcatc cgcgtgtgcg gtgggacatc ctcgacgcgg tgcgcgaggc
      301 ggcagcggcg gccggcatcc cgaagatcga cgacttcaac accggggaca acgagggctc
      361 gtcctatttc caggtcaacc agaagcgcgg gcggcggtgg agcgcggcgc gcggcttcct
      421 caagccggct ttgcaccgcc cgaacctgcg cctcgaaacc ggcgtgcatg tcgaacgcgt
      481 gctgctcgag ggcctgcgcg ccacgggcgt cgccttcacg cgcgatggcg agcgtcacgt
      541 ggcgcgcgcg gccggcgagg tgatcctgac cgctggcgcg gtcgcatcgc cgccaatcct
      601 tgagcgctcc ggcatcggcg atggcgcgcg cctccgcgag ttcggcatcg tggctacgca
      661 tcacctgccc ggcgtcggcg agaacctgca ggaccatctg cagctgcgcc cggtctacag
      721 ggtgtccggc gtgcgcacgc tcaacgacga ttacgcgcgg ctgtggcgcc gggggctgat
      781 gggcctgagc tacgcggctc tgcgccgcgg gccgcttacc atggcgccgt cgcagctcgg
      841 cgccttcgcg aggtcgagcc ccgattacgc caccgccaat ctcgagtttc atttccagcc
      901 gctctcgctc gacaaatggg gcgacgggct gcacccgttt gcggctttca cggcgagcgt
      961 gtgcaacgta cgcccgtcca gccggggcag cgtgcacgtc accggcgccg acgcgctggc
     1021 cgcgcccatg atccagccga actacctttc caccgacgag gaccgacgcg tcgctgcgga
     1081 tgcgcttcgg ctgacgcggc gaatcgtggc gcagccgccg ctcgcccgct tcaacccgga
     1141 ggaatacagg cctggcgctc atctgacgtc ggaggacgag ctggtgcacg cggccggcga
     1201 gatcggcacc accatcttcc atcccgtagg cacggcccgc atgggtcccg accacgatgc
     1261 catggcggtg ctcgacgggc ggctgcgcgt gcgtggcatc gcggggttgc gcgtgatcga
     1321 cgcctcggcg atgccccgga taacttccgg caacaccaac tcgccgacca tcatgatcgc
     1381 cgaaaagggg gccgccatgg tgctcgacga cgcccggcgc tgaccggccg cctcaagccg
     1441 caaatcgcca agcatgaccc ggcgaagtgg cgcctctcgc cgaaaaagac cagccggctc
     1501 aattagtaaa gagagcggga tcgatccgat ccgacctgac cccgcctccg gtcgcgatct
     1561 cgtgttggca aattcccgtt cgatcgtgca accaagcttg gccatgcgag gttgttggtt
     1621 gggacggcca gagatgtgca cttgacctgc gaagtcttgt gcttcgcgat cgcagcgcct
     1681 gcgcgctaca cgtttctgtg aacgcgtgaa cgaagcgtcg tcctcggggg ttgggctcgc
     1741 tcaactcgag aggtgcgcac atggccgcag atcttctccg cttcgcaatc ggggcagtgg
     1801 ctccactcgc ctcggtgacg tggctgttgt tgcgttagtt gccgcaaaat ttctgccccg
     1861 gggactcacg cccggatcat gtgaccgaaa gaaacggggt cggcc
//
LOCUS       DATAIQ010000485         1825 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_25216, whole genome shotgun sequence.
ACCESSION   DATAIQ010000485 DATAIQ010000000
VERSION     DATAIQ010000485.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1825)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1825)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1825
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_25216"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1193
                     /locus_tag="VHN20_08050"
     CDS             <1..1193
                     /locus_tag="VHN20_08050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012329534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX2725755.1"
                     /translation="PDETGRREILGIHTRGMPLADGVELDDLARRTYGFVGADLAALT
                     REAALEAVRRIMPELNLADGVIPNEVLDRLSVVASDFDNALKRVQPSAMREVMVQVPT
                     LGWDDIGGLDAAAAKLREGVELPLKHPDAFRRLGIRPAKGFLLYGPPGTGKTLLAKAT
                     ARESQANFIATKSSDLLSKWYGESEQQIARLFARARQVAPTVIFIDELDSLVPARGGG
                     MGEPQVTERVVNTILAEMDGLEELQGVVLIGATNRPNLIDPALLRPGRLDELVYVGPP
                     DVAGRRRILAIHAKNMPLASDVDLEALARRTEHFTGADLEDLTRRAGLTALRRDLGNA
                     EVSMADFEAALSETRASVTPEMLAEYERIQDTLKSDAVRPDRGGIGFISPGMLQPRAG
                     GKGA"
     gene            complement(1190..>1825)
                     /locus_tag="VHN20_08055"
     CDS             complement(1190..>1825)
                     /locus_tag="VHN20_08055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725756.1"
                     /translation="AMSYPSLASMITGASVRAATAPTRQKRLSWRDRRIKRWIVSGVV
                     AGHAQAGTLTCIGFFIIDTLKVPPLGAEQPIAIVMMAGAGGTLAAQWGLIPKLNLSPR
                     ALIVWGSLIAAAGLAATAIASDLYSLVLGFGITSIGFGFTRPGFTSGASLAVPLAEQG
                     GVAGVITSANGISYVAAPTIGMALYTLNPHLPFALATAVVLALAWWGRTLR"
BASE COUNT          329 a          584 c          631 g          281 t
ORIGIN      
        1 tgcccgatga aacgggccgc cgcgagatcc ttggcatcca cacccggggc atgccgctag
       61 cagatggcgt cgaactggat gacctcgcgc gccggaccta cggtttcgtc ggtgccgacc
      121 tcgccgcttt aacccgggaa gccgcgttgg aagcggtgcg gcggatcatg ccggagctga
      181 accttgccga tggagtcatc ccgaacgagg tgctggaccg attgagcgtc gttgccagcg
      241 acttcgacaa tgctttgaag cgcgttcagc cctcggcgat gcgcgaggtc atggtgcagg
      301 tgccgacgct cggctgggac gatattgggg ggctggatgc cgcagcggcg aagctgcgcg
      361 agggcgtgga actgccgctc aagcacccgg acgccttccg ccgcctcggg atccggccgg
      421 ccaagggctt cctgctttat ggaccgccgg gcaccggcaa gaccttgctg gccaaggcga
      481 cggcacgcga aagccaggcg aatttcattg ccaccaagag ctcggacctc ttgagcaaat
      541 ggtatggtga gagcgagcag cagatcgccc ggctgttcgc ccgcgcccgt caggttgcgc
      601 caacggtgat cttcatcgac gagctcgaca gtctggtgcc ggcgcggggc ggcggaatgg
      661 gtgagccgca ggtgaccgaa cgagtggtca acaccatcct cgccgagatg gatgggcttg
      721 aggaactgca aggcgtggtg ctgattggcg ccaccaatcg gcccaacctc atcgaccccg
      781 cactgctgcg gccgggacgg ctcgacgagc tcgtctatgt aggtccgcca gatgtcgcag
      841 gacgtcggcg tattcttgcc atccacgcca agaacatgcc cttggcttcg gatgtcgacc
      901 tggaagcact tgcccgtcga accgagcact tcaccggtgc cgacctcgag gatctgacac
      961 ggcgtgccgg cctgactgcg cttcgccgcg accttggcaa tgcagaagtg tccatggccg
     1021 acttcgaagc ggcgctcagc gagacgcgcg cgtcggtcac acccgagatg ctggccgaat
     1081 atgagcggat ccaggacacg ttgaagagcg atgcggtgcg gccggaccgt ggcggcatcg
     1141 gcttcatctc gcccggcatg ctgcagccgc gggccggcgg taagggcgct tagcgcagcg
     1201 tgcgccccca ccaggccaga gcgagcacca cggcagtggc gagcgcgaag ggcaggtggg
     1261 ggttgagcgt gtaaagcgcc atgccgatcg tcggcgcggc gacatagctg atgccgttgg
     1321 cagacgtgat cacgccggcc acgccgccct gctccgccaa aggcacggcc agactggcgc
     1381 cgctggtgaa gcccggacgg gtaaagccga agccgatcga ggtaatgccg aaacccagca
     1441 ccaggctgta gaggtcgctg gcgatggcgg tggcggcgag cccggcagcc gcaatcaacg
     1501 acccccaaac gatcagcgcg cgcggggaca ggttgagctt ggggatgagg ccccattgcg
     1561 ccgccagtgt tccaccggcg cccgccatca tgacaatcgc aatcggctgc tcggcgccga
     1621 gcggcgggac cttcagcgtg tcgatgatga aaaagccgat gcaggtcagc gtccccgcct
     1681 gggcatgacc ggcgaccacg cccgagacga tccagcgctt gatccggcgg tcgcgccacg
     1741 acagccgttt ttggcgcgtc ggcgcagtgg cggcgcgcac gctcgcgccc gtgatcatgg
     1801 aggcaaggct gggataactc atcgc
//
LOCUS       DATAIQ010000486         3023 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_242564, whole genome shotgun sequence.
ACCESSION   DATAIQ010000486 DATAIQ010000000
VERSION     DATAIQ010000486.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3023)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3023)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3023
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_242564"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1700
                     /locus_tag="VHN20_08060"
     CDS             <1..1700
                     /locus_tag="VHN20_08060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PAS domain-containing sensor histidine kinase"
                     /protein_id="HEX2725757.1"
                     /translation="TSRATFLGFPLAMLLEANGTPVEEIELRTLENVAPLSEADARDV
                     GESDALCLIPRGGNVFRAAVKLKGHDGRLLFVARPVDPRSIEFVPAAEAGVAYYQILE
                     QKKLGIQIAFASMFALVALIVLLSAVWFGLNFANRLVAPIRRLIHATDQVATGNFYVQ
                     VPIRRDEGDLAHLGETFNKMTSELRHQHDDLTAASDLMDRRRRFTEAVLSGVSAGVIG
                     IDARGQITIVNPSAEALLAAARTDVVGSPIDAVLPEIGPLIEEAKSTRQRLIQQQVLI
                     SRNGRERTLNVRVTSEQAKGEEKGFVVTLDDITDLVSAQRTSAWADVARRIAHEIKNP
                     LTPIQLSAERIRRKYGKVITTDREVFDQCTDTIVRQVDDIKRMVDEFSSFARMPKPKM
                     GDEDVVDTIRQVVFMMRIAHPDLVFGDEMPKTPIHARFDRRLLSQAITNIVKNATEAI
                     AAVPENERGQGEIQVSVRKDTDDMVVIEITDNGKGFPAEGRQRLLEPYMTTREGGTGL
                     GLAIVSKIFEEHGGGIELADNPGGRGGRVRLWFSSREGEGETETTSATTHEPRRASA"
     gene            1697..>3023
                     /locus_tag="VHN20_08065"
     CDS             1697..>3023
                     /locus_tag="VHN20_08065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003600268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEX2725758.1"
                     /translation="MSADILIVDDETDIRELVAGILDDEGHRTRTAGTSDEALASIEA
                     RRPHLVFLDIWLQGSRLDGLQVLDVVKSQNPDLPVVMISGHGNIETAVSAIKAGAYDF
                     IEKPFKADRLVLVAERALEASRLKREVRDLKARSVQASRIAGHSAAMNSLRQTIERVA
                     PTNARILVTGAPGSGKELTARTLHALSMRANGPFVVINAATITPDTMEAELFGIEGGD
                     EKGRRIGALEEAHGGTLYIDEIADMPRETQNRILRVLVDQNFQRVGGSTRVHVDVRII
                     SSSSRDLAAEIAAGRFREDLFHRLGVVPIRVPSLSEHREDVPELIAFFMDQISAATGL
                     PKRRIAEDAMAVLQSHDWPGNVRQLRNNVERLLILATGDAEAEITADKLPSEVGALVP
                     TTPNGAGGEKLMGLPLRDAREIFEREYLVAQIARFSGNISRTAEFIGMER"
BASE COUNT          533 a         1043 c         1005 g          442 t
ORIGIN      
        1 tgacctcgcg cgccacgttc ctcggcttcc ccctggccat gctcctcgag gcgaacggga
       61 cgccggtcga ggagatcgag ctgcgcaccc tcgagaacgt ggcgccgctg agcgaggccg
      121 acgcccgcga cgtcggcgaa agcgacgcgc tctgcctgat cccgcgcggc ggcaacgtgt
      181 ttcgcgcggc ggtcaagctg aaagggcatg acgggcgcct cctgttcgtc gccaggcccg
      241 tcgatccgcg ctcgatcgag ttcgtgccgg ccgccgaggc gggcgtggcc tattaccaga
      301 tcctcgagca gaagaagctc ggcatccaga tcgccttcgc gtcgatgttc gcgctcgtgg
      361 cgctgatcgt gctcctgtcg gcggtctggt tcggcctcaa cttcgccaac cggctggttg
      421 cgccgatccg gcgactcatc catgccaccg accaggtcgc gaccggcaac ttctatgtgc
      481 aggtgccgat ccgccgcgac gagggggatc ttgcgcatct cggcgagacc ttcaacaaga
      541 tgacgtcgga gctgcgccac caacacgacg acctgaccgc ggcaagcgat ctgatggacc
      601 gccggcggcg gttcacggaa gcggtcctgt ccggcgtgtc ggcgggcgtg atcggcatcg
      661 acgcgcgcgg ccagatcacg atcgtcaacc cttcggccga ggcgttgctg gcggccgcgc
      721 gcaccgacgt ggtgggatca ccgatcgacg cggtgctgcc cgagatcggg ccgctcatcg
      781 aggaggcgaa gtcgacgcgc cagcgtctca tccagcagca ggtgctgatt tccaggaacg
      841 gccgcgagcg cacgctcaac gtgcgcgtga cgagcgaaca ggccaaaggc gaggagaagg
      901 gcttcgtcgt gacactcgac gacatcaccg acctggtctc ggcgcagcgc acctcggcgt
      961 gggccgacgt ggcgcgccgc atcgcccacg agatcaagaa tccgctgacc ccgatccagc
     1021 tttcggccga gcgcatccgg cgcaaatacg gcaaggtcat cacgaccgac cgcgaggtgt
     1081 tcgatcaatg caccgacacg atcgtgcgcc aggtcgacga catcaagcgc atggtcgacg
     1141 agttctcgtc cttcgcgcgc atgcccaagc cgaagatggg cgacgaggac gtcgtcgaca
     1201 caatccgcca ggtggtgttc atgatgcgca tcgcgcatcc cgatctcgtc ttcggcgacg
     1261 agatgccgaa aacgccgatc catgcgcgct tcgaccgccg cctgctttcg caggccatca
     1321 ccaacatcgt gaagaacgcc accgaagcga tcgccgccgt cccggagaac gagcgcgggc
     1381 agggcgaaat tcaagtgtcg gtgcgcaagg acacagacga catggtggtg atcgagatta
     1441 cggacaacgg caagggcttc ccggcggaag ggcgccagcg tctgctcgag ccatacatga
     1501 ccacacgtga gggcgggacg ggcctcggcc tggccatcgt cagcaagatt tttgaagagc
     1561 atgggggcgg catcgaactc gccgacaacc cgggcgggcg cggcggacgc gtgcgcctgt
     1621 ggttctcgtc ccgcgagggt gagggcgaga ccgagaccac ctccgcaacc acgcacgaac
     1681 ctcgtagggc aagcgcatga gcgccgatat cttgatcgtt gacgacgaaa ccgacatccg
     1741 cgagctggtg gcgggcatcc tggatgacga aggccaccgc acgcgcacgg cgggcacctc
     1801 cgacgaggcc ctcgcctcaa tcgaggcgcg ccggccgcac ctcgtcttcc tcgacatctg
     1861 gctgcagggc agccgcctcg acgggctgca ggtgctcgac gtcgtcaaga gccagaaccc
     1921 ggacctgccg gtcgtgatga tctccggcca cggcaacatc gagaccgccg tgtcggccat
     1981 caaggcgggc gcctacgact tcatcgagaa gccgttcaag gccgatcgcc tggtgctcgt
     2041 cgccgagcgc gcgctcgaag cctcgcgcct caagcgcgag gtgcgcgacc tcaaggcgcg
     2101 ctcggtgcag gcgagccgca tcgccggcca ttccgcggcg atgaacagcc tgcgccagac
     2161 catcgagcgc gtggcgccga ccaacgcccg catcctcgtc acgggcgcgc ccggctccgg
     2221 caaggagctc acggcacgca cgctgcacgc cttgtcgatg cgcgccaacg gccccttcgt
     2281 ggtgatcaac gccgccacca tcacgcccga cacgatggaa gccgagctgt tcggcatcga
     2341 gggcggcgac gagaagggcc ggcgcatcgg tgccctcgag gaggcgcatg gcgggacgct
     2401 gtatatcgac gagatcgccg acatgccccg ggagacgcag aaccgcatcc tgcgggtgct
     2461 ggtcgaccag aacttccaac gcgtcggcgg cagcacgcgc gtgcatgtcg acgtgcgcat
     2521 catctcgtcc tcgagccggg acctcgccgc cgagatcgcc gccggccggt tccgcgaaga
     2581 cctgttccat cgcctcggcg tcgtgccgat ccgcgttccc tccctgtcgg agcatcgcga
     2641 ggacgtgccc gagctgatcg ccttcttcat ggatcagatc tcggccgcga ccggcctgcc
     2701 caagcgccgc atcgccgagg acgccatggc agtgctgcag tcgcatgact ggccgggcaa
     2761 cgtgcgccag ctgcgcaaca acgtcgagcg cctcctgatc ctggcgaccg gcgatgccga
     2821 ggcggagatc acggccgaca agctgccgtc ggaagtgggc gcgctggtgc cgaccacgcc
     2881 caacggcgcc ggcggcgaga agctgatggg cctgcccctg cgcgatgcgc gcgagatctt
     2941 cgagcgcgaa tatctggtgg cgcagatcgc ccgcttcagc gggaacatct cccggacggc
     3001 cgagttcatc ggcatggagc gct
//
LOCUS       DATAIQ010000487         3240 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_150472, whole genome shotgun sequence.
ACCESSION   DATAIQ010000487 DATAIQ010000000
VERSION     DATAIQ010000487.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3240)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3240)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3240
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_150472"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..818)
                     /locus_tag="VHN20_08070"
     CDS             complement(<1..818)
                     /locus_tag="VHN20_08070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006201615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase, T2SS/T4P/T4SS family"
                     /protein_id="HEX2725759.1"
                     /translation="MLGKQKLLDAKVRLHKKLLEDLNLAALEKLPEQELRREIHAIIS
                     DWVKNERLALNTQELNNFVTEVMDEMTGLGPLEPLLKDPTIADILINGHHNIFVERRG
                     MLEQVPSLFKDEAHLMRIIQKIVSAVGRRVDESSPLCDARLLDGSRFNCAVRPIGVDG
                     PLVSIRKFSKSKLSLDKLVEVGAVRPQIAEVLAAAVKARITTIVSGGTGSGKTTMLNA
                     LSAYISHTERLITIEDAAELQLQQPHVARMETRPPNIEGKGEIRQRDLVKNALR"
     gene            complement(1295..2452)
                     /locus_tag="VHN20_08075"
     CDS             complement(1295..2452)
                     /locus_tag="VHN20_08075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator receiver protein"
                     /protein_id="HEX2725760.1"
                     /translation="MTPETTAQLPSIVLVGTDAAFLTAVAAAIGPSPGVNVSTITESI
                     EHASARPELDAAAVLVIDLDAKRRESLVALQGIVNRQGGRIPVVVLVDSFDDTLARWL
                     LQIRVSDFLRKPVEPKEVLRTCLRALRATSTLSEDEGRILTFLAAAGGVGTTTLAIET
                     AMLLLRGGNGRGMEPTCLVDLDFSGAACADYLDLDPRLDLDEVGPHPERLDLQLLDVM
                     LARHSSGLSLLAARGRPGERCSLDPEVVIRLLDLVSSRFENVVIDLPRTWEPWTDQVL
                     LGSNRVYVVTDMTVPGLRFGRRMAGSISHRLPEVKPRVIVNRFEQQFFGSGLRRTDIE
                     RALDGFLEGTVINNYKLVREAIDRGTPLEQLKPGSNVSTDLKKIILADVAA"
     gene            complement(2460..2759)
                     /locus_tag="VHN20_08080"
     CDS             complement(2460..2759)
                     /locus_tag="VHN20_08080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein"
                     /protein_id="HEX2725761.1"
                     /translation="MATRLPLIAATLLLSGCQDYFARRDTIAFHAGEAAAYNKAIHVI
                     DPWPAASARTDIDFNGKRIVNAIERYEAPHAPNGHGAAPSPMMGMPPAVSPTAGR"
     gene            complement(2767..>3240)
                     /locus_tag="VHN20_08085"
     CDS             complement(2767..>3240)
                     /locus_tag="VHN20_08085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018270911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II and III secretion system protein family
                     protein"
                     /protein_id="HEX2725762.1"
                     /translation="IEPEVSQLDPTNFVRSAGIAIPALIVRRASTVIELRDGQSFAIA
                     GLLQSVNQETQQQLPWIADIPIIGTLFRSAAFERKETDLAIIVTPRLVQPARPGQRLR
                     TPLDPAVPANDADLFLTGQQEIPVGKARAAGMTPAAPVGHILDLGKERTRVVARN"
BASE COUNT          519 a         1018 c         1160 g          543 t
ORIGIN      
        1 atgcgcaggg cgttcttgac gaggtcgcgc tggcggattt cacctttgcc ctcgatattc
       61 ggggggcgcg tttccatgcg ggccacatgc ggctgctgca gctgcagctc ggccgcgtcc
      121 tcgatagtga tcagacgctc cgtatgggaa atataagccg acagcgcgtt gagcatcgtc
      181 gttttgcccg agcccgtgcc gccggacacg atcgtggtga tgcgcgcctt cacggccgcc
      241 gcgagcactt ccgcgatctg cgggcgcacg gcgccgactt cgaccagctt gtcgagggac
      301 agcttcgact tggagaactt tcggatcgag acaagcgggc cgtcgacacc gatcggccgg
      361 acggcgcagt tgaagcgcga accgtcgagc aggcgcgcgt cgcagagcgg gctcgactcg
      421 tcgacgcgcc ggccgacggc cgacacgatc ttctggatga tgcgcatcag atgcgcttcg
      481 tccttgaaca gcgagggcac ctgctcgagc atgccgcggc gctcgacgaa aatgttgtgg
      541 tggccgttga tcaggatgtc ggcgatggtc ggatccttga gcaggggctc gagcgggccg
      601 agccccgtca tctcgtccat cacctcggtg acgaagttgt tgagctcctg cgtgttcagg
      661 gcgaggcgct cgttcttgac ccagtccgag atgatcgcgt ggatctcgcg gcgcagctcc
      721 tgctcgggga gcttttcgag tgcagcgagg ttcaggtctt cgagcaactt cttgtgcagc
      781 cgcaccttgg cgtcgaggag cttctgcttg ccgagcatcg ctccggcagc tgactccgcg
      841 aacgcgaccg gcgccaccgg aagcggcctc ggcgactcgg gcgcttcagc gggtgcaatg
      901 ataatcgcgg cttcggccgg cacggggggc gggaccggag ccgagcccgc gggcggtgcg
      961 tcttcgctga ccggcggcgg aaggaccgga gccgcctcgc cgacgtccgc gaccgcaggc
     1021 ggcggcgggg ccgccggcgt ctcgccggcg ggtttggtgt tcaggcgagc ggaaaaacgt
     1081 ccaagcatgt gcgcaaccga agttcttcag ggcgccgccg cgcccgataa atcggtttcg
     1141 acagtggacg cacggccgta aaaacgccgt tgccagatcg agaaagtttt aggagtgcct
     1201 aacaggtgat tgccagtgcg agccgctgca ggatttgggt ccgggcggct gccgccggcc
     1261 ggcttcgcca aaacgtcatc gatgtccgaa gctgtcaggc ggccacgtcg gcgaggatga
     1321 tcttcttcag gtcggtcgag acattgctgc ccggcttgag ctgctcgaga ggcgtgccgc
     1381 gatcgatcgc ttcgcgcacc agcttgtaat tgttgatcac cgtgccctcg aggaagccgt
     1441 cgagcgcccg ctcgatgtcc gtgcgacgca ggccggaccc gaaaaactgc tgctcgaagc
     1501 ggttcacgat gacccgtggt ttcacctccg gcaggcggtg gctgatggag cccgccatgc
     1561 ggcggccgaa gcgcaggccc ggcactgtca tgtcggtgac cacatagacg cggttcgagc
     1621 cgagcagcac ctgatcggtc cacggctccc aggtgcgcgg caggtcgatc accacgttct
     1681 caaagcgcga cgatacaagg tcgagcagac ggatcaccac ctctggatcg aggctgcagc
     1741 gctcgccggg ccggccgcgc gccgccagca gcgacaggcc cgacgaatgg cgtgccagca
     1801 tgacgtcgag gagctgcaga tcgaggcgtt caggatgcgg ccccacttcg tcgaggtcga
     1861 gacgcgggtc gagatcgaga tagtcggcgc aggcggcgcc cgagaaatcg aggtcaacga
     1921 ggcaggtcgg ctccatgccg cgaccgttgc cgccgcgcag cagcagcatc gccgtctcga
     1981 tcgccagcgt cgtcgtgccg acgccgccgg cagccgcgag gaacgtgagg atgcggccct
     2041 cgtcctccga cagcgtcgaa gtcgcacgta gcgcccgcag gcaggtgcgt agcacctcct
     2101 tgggctcgac cggtttgcgc aggaagtccg agacccggat ttgcagcagc cagcgagcca
     2161 gggtgtcgtc gaaggaatcg accagaacca cgaccgggat gcggccgcct tgccggttca
     2221 cgattccctg cagcgcgacg aggctctcgc gacgcttggc gtcgagatcg atcacgagca
     2281 ccgcggccgc atcgagctcg ggccgcgcgc tcgcgtgctc gatgctctcg gtaatcgtgc
     2341 tgacgttcac gccgggcgac gggccgatgg ccgccgcgac cgcggtcagg aacgccgcgt
     2401 cggtgccgac gaggacgatc gagggaagct gcgctgtggt ttccggcgtc atctgagcat
     2461 tagcggccgg cggtcggaga gacggccggc ggcatcccca tcatgggcga gggcgcagcg
     2521 ccgtgtccgt tcggcgcgtg aggcgcttcg tagcgctcga tggcgttgac gatgcgcttg
     2581 ccgttgaaat cgatatcggt gcgggccgac gcggccggcc acggatcgat cacgtggatc
     2641 gccttgttgt aggcggcggc ctcgccggcg tggaacgcga tcgtgtcgcg gcgcgcgaaa
     2701 taatcctggc agccgctcag cagcagtgtt gcggcaatga gcggaaggcg cgtcgccaat
     2761 ttccgtttag ttccttgcga caacacgggt gcgctcctta ccgagatcga gaatgtggcc
     2821 gacgggggcg gcgggcgtca tgccggcggc gcgcgccttg ccgaccggga tttcctgctg
     2881 gcccgtgagg aagagatcgg cgtcgttggc cggaaccgcg ggatcgagcg gcgtcctgag
     2941 gcgctggccg gggcgcgccg gctgcacgag gcgcggggtc acgatgatcg ccaggtccgt
     3001 ctccttgcgc tcgaaggctg ccgagcggaa cagggtgccg atgatcggga tgtcggcgat
     3061 ccagggcagc tgctgctgcg tctcctggtt gacgctttgc agaaggccgg cgatcgcgaa
     3121 gctctggccg tcgcgcagct cgatcacggt cgaggcgcgg cgcacgatca gggccggaat
     3181 ggcgatgcct gcgctgcgga cgaagttggt cgggtcgagc tggctcacct ccggctcgat
//
LOCUS       DATAIQ010000488         1639 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_118366, whole genome shotgun sequence.
ACCESSION   DATAIQ010000488 DATAIQ010000000
VERSION     DATAIQ010000488.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1639)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1639)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1639
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_118366"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(125..211)
                     /locus_tag="VHN20_08090"
     tRNA            complement(125..211)
                     /locus_tag="VHN20_08090"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(175..177),aa:Leu,seq:taa)
     gene            complement(388..675)
                     /locus_tag="VHN20_08095"
     CDS             complement(388..675)
                     /locus_tag="VHN20_08095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725763.1"
                     /translation="MTIRVLGLSAALAVALSGAAFAQASVQGSVTEVQEGGRKVVLKT
                     SDGKTTTVSVSGSRTKVTVGGAAGSRESIKAGMTCTAAGPAGADATALDCK"
     gene            complement(974..1192)
                     /locus_tag="VHN20_08100"
     CDS             complement(974..1192)
                     /locus_tag="VHN20_08100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725764.1"
                     /translation="MASRFVASLLLVLIAGAIGAFFVAAGWIPWTHALIAFVFVLAGW
                     GFAARRKRPAAPLDYRRRHPEEQAQSGS"
     gene            complement(1414..>1639)
                     /locus_tag="VHN20_08105"
     CDS             complement(1414..>1639)
                     /locus_tag="VHN20_08105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018263220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX2725765.1"
                     /translation="MEEQGAATSEIARNVQQAAQGTQVVTGNILDVKRGAGETGSAAA
                     QVLAAAQELARHSEDLGREVDSFLSGVKAA"
BASE COUNT          267 a          551 c          576 g          245 t
ORIGIN      
        1 aagatcaatt cttgcgccga gcgacgaaat gagtccgtgc ggagcgattc caccccgcgc
       61 gaagcggtta aggaatgatt catcgactca cgcgcgcgcg cgttgcctgt tctcgcaatc
      121 gaggtggtgc ggacggccgg acttgaaccg gcatggggtt gcccccgagg gattttaagt
      181 cccttgcgtc taccaattcc gccacgtccg cgggccggaa gccgaaaaga ccggctccgg
      241 gtggcatatg catcctctca gcttcgcccg agatgcttgc ccgagggtta gcggggcggt
      301 ccggcggacg caagagcggg ccggcgccgc aaaagaaaag cgccgcgggg cgagaccccg
      361 cggcgcgtat ggcgtgggtt gcctggctta cttgcagtcg agggcggtcg cgtcggcgcc
      421 ggccgggccg gcggccgtgc aggtcatgcc cgccttgatg gactcgcgcg agccggcggc
      481 gccgccgacg gtcaccttgg tgcgcgagcc cgacacgctc acggtcgtgg tcttgccgtc
      541 gctcgtcttg agcacgacct tgcggccgcc ttcctgcact tcggtcacgg acccttgcac
      601 gctcgcctgc gcgaaggccg cgccggacag cgcgacggcg agggcggcag agagtccaag
      661 gacacgaata gtcatgcgtt ttctccattg atggcggttg gcttaacgaa gcagccccgc
      721 cctggtttca atttgcgccg gcagaatcca aaatcgcgtg gcgccacggc gcgcgtgaca
      781 cgcggcagcg acggcgtcaa cgggcgacgt ccggtcgctc acgactgcgc cccatagcga
      841 agcgctgacc gggaaaagcc atgccgacca caggcgctcg cctgtgcgga gggggggcgg
      901 cgcgcttcca atcgagatca ccggcacaag gccggtgacg acacgcgaga gcatgaacgg
      961 tgcgcagagc gtctcatgat ccgctctgcg cctgttcctc gggatgacgc ctgcggtagt
     1021 cgagcggcgc ggcaggccgt ttgcggcgcg ccgcgaagcc ccagccggca agcacgaaga
     1081 cgaaggcgat cagggcatgc gtccacggga tccagcccgc ggccacgaag aacgcgccga
     1141 tggcgccggc aatcaggacg agcaacaagg acgcgacgaa gcgggaggcc atggcgacgt
     1201 gttccgcgag gacaaagggg ctgcccattc gggcttggtg gacaatgcca acgcccgggg
     1261 cggcgtccac gttccgcatc ggcggtcggc tgctcggcgc cgaccggccg cgaaggcctg
     1321 aggccgcgaa gcggacacgc cccttatgac ctcccgtcag tgatgcgagg ccgggcatga
     1381 ggcccggcct ccggcattcg tgtcggcagg cggtcaggcg gctttgacgc ccgacaggaa
     1441 gctgtccacc tcgcgtccga gatcctcgga gtgacgggcc agttcctgcg ccgcagcgag
     1501 cacctgggcg gcggcggagc cggtctcacc cgccccgcgc ttcacgtcga ggatgttgcc
     1561 cgtcacgacc tgcgtgccct gcgccgcctg ctgcacgttg cgggcgattt cgctcgtcgc
     1621 cgcgccctgc tcctccatg
//
LOCUS       DATAIQ010000489         3669 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_25274, whole genome shotgun sequence.
ACCESSION   DATAIQ010000489 DATAIQ010000000
VERSION     DATAIQ010000489.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3669)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3669)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3669
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_25274"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..534)
                     /locus_tag="VHN20_08110"
     CDS             complement(<1..534)
                     /locus_tag="VHN20_08110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020184938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004671 - protein C-terminal
                     S-isoprenylcysteine carboxyl O-methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006481 - C-terminal protein methylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxylmethyltransferase
                     family protein"
                     /protein_id="HEX2725766.1"
                     /translation="MTLATLLLGFVTLQRLGELALARRNTARLRTLGAIEAGAAHYPL
                     IVALHAAWLAGLWLLAWDVQPSLFWLAAFIVLQVLRIWVLATLGRRWTTRILVLPGAP
                     LVRHGPYRFLAHPNYAVVVGEIAVLPLAFGLYWYALVFSLLNAAVLAVRIRAEKEALR
                     SLSPTGRGQGEGERPLRK"
     gene            complement(531..1583)
                     /locus_tag="VHN20_08115"
     CDS             complement(531..1583)
                     /locus_tag="VHN20_08115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012040557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III polyketide synthase"
                     /protein_id="HEX2725767.1"
                     /translation="MAPTARLLSLATAVPAHVVTQREVAAEAHAVFAHRYEEYEYIAP
                     VFEHAGIRTRHAVRPMSWYVEPRGWPERTAAYLEAAQDLFVAAAGQALARAGLDGRDV
                     DTVVTISSTGIATPSLEARVFGRMGFRNDVMRVPVFGLGCAGGVSGLAIAARLAETRP
                     GTNVLLVALELCTLAVRLDELTKANIVATALFGDGAAACVLRAGEGGIAAIEGAGEHT
                     WADTLDVMGWSVDPQGFGVIFARTIPPFIEQNMAPAVAGILGRMGLAFADVDRFVCHA
                     GGTKVIAALEQALGVGQGALHHEREVLADYGNMSAPTVLFVLERVIGAGLPHRCVLTA
                     MGPGFTASCLSLTNGA"
     gene            complement(1694..2659)
                     /locus_tag="VHN20_08120"
     CDS             complement(1694..2659)
                     /locus_tag="VHN20_08120"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX2725768.1"
                     /translation="MFDKPNCPVIALEEHYWDDEMAAHYTGVEATRAPDIARRLSDLG
                     ELRLREMDEAGIDMQVLSHGAPSAQKLPANVAVEVTRRVNDRLAAVIAAHPTRFAGFA
                     ALPTADPEAAADELARMVERHGFKGAMIHGLADGLFLDDRRFWPIFKRAQKLDVPIYL
                     HPSVPHPAVMDAYYKEYAKDYPMVIRAAWGYTVETATQAIRLVLSGVFDRYPHLKIIL
                     GHLGETLPFLVWRIDHALARPGQKAVSFRDVFCNNFYITTSGNFSDPALLCSIMEMGV
                     DRILFAVDYPFVMNPPATEWMKRVPLSDADKAKILSGNAKHLLGI"
     gene            complement(2914..>3669)
                     /locus_tag="VHN20_08125"
     CDS             complement(2914..>3669)
                     /locus_tag="VHN20_08125"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEX2725769.1"
                     /translation="NLAGGGGWIGWGTLAMAQPDGYTLGYLNVPSMYAGYLDRQYNRK
                     ETLDSFTPLMNHVIDYNVWAVKADSPYKSVADVVEAAKKAPEQVTITAYGAGSDDHLG
                     ILGVQSRAGVKFGVIHHRSTADAKAQALGGHVHVLGANISEVAEEVKSGQLRLLGVMS
                     AERSKFLPDASTFREQGFDIVMSVSRGVAAPASLPKPIEARLTEALEKVLSSKDHRDR
                     AEQLALQPEIIKGEAYKTFLKDNEQATRQLMGW"
BASE COUNT          603 a         1262 c         1255 g          549 t
ORIGIN      
        1 ttttcggaga ggtcgctccc cctcaccctg acctctcccc gttggggaga gggaacgcag
       61 cgcctctttc tcggcgcgga tgcgcaccgc caggaccgcc gcgttgagca acgagaacac
      121 gagcgcgtac cagtagaggc cgaaggcgag cggcagcacg gcgatctcac cgaccacgac
      181 cgcgtaattg ggatgcgcga ggaaccgata cggcccgtga cgcacgagcg gcgcgcccgg
      241 cagcacgagg atgcgcgtcg tccagcgccg gccgagcgtc gccagcaccc agatgcgcag
      301 cacctgcagc acgatgaacg cggcgagcca gaacaggctc ggctgcacgt cccatgccag
      361 cagccacagg cccgcgagcc aggccgcgtg gagcgccacg atcagcgggt aatgggcggc
      421 accggcctca atcgcgccga gcgtcctcag ccgcgcggtg ttgcggcgcg cgagcgcgag
      481 ctcgccgaga cgctgcagcg tgacaaagcc cagcagcaga gtggcgagcg tcatgcgccg
      541 ttggtgagcg acaggcagct cgcggtgaag ccggggccca tggcggtcaa tacgcagcga
      601 tgcggcaggc cggcgccgat cacgcgctcg agcacgaaca gcaccgtcgg cgccgacatg
      661 ttgccgtaat cggccagcac ctcgcgctcg tgatggagcg cgccctggcc gacgccgagc
      721 gcctgctcga gcgcagcgat gaccttggtg ccgccggcat ggcagacgaa gcggtccacg
      781 tcggcgaagg cgagtcccat gcggccgaga atgccggcga cggccggggc catgttctgc
      841 tcgatgaaag gcgggatggt gcgcgcgaag atcaccccga aaccttgcgg gtccacgctc
      901 cagcccatca cgtcgagcgt gtcggcccag gtgtgctcgc cggcgccctc gatcgcggcg
      961 atgcccccct cccctgcgcg caggacgcaa gcggcggcgc cgtcgccgaa cagcgccgtg
     1021 gcgacgatgt tggccttggt cagttcgtcg agccggaccg cgagggtgca caattcgagc
     1081 gccaccagca gcacgttcgt gcccggccgc gtctcggcaa gacgcgccgc gatggcaagc
     1141 ccgctgacgc cgccggcgca tcccaggccg aacaccggga cccgcatgac gtcgttgcga
     1201 aagcccatgc ggccgaagac gcgcgcctcg agactcggcg tggcgatgcc ggtcgacgag
     1261 atggtgacga cggtgtcgac gtcgcggccg tcgaggccgg ccctggcgag cgcctgtccc
     1321 gccgccgcga cgaacaggtc ctgggcggct tcgagatacg ccgccgtacg ctccggccag
     1381 ccgcgcggct cgacgtacca ggacatgggg cgcacggcgt ggcgggtcct gatgcccgca
     1441 tgctcgaaca cgggcgcgat atactcgtat tcctcgtaac gatgcgcgaa gaccgcgtgc
     1501 gcctcggccg ccacctcgcg ctgcgtcacg acgtgcgccg gcacggccgt cgccagcgac
     1561 agaaggcggg cggttggcgc catacgtctc tcttcctgcc cagggaccgc aaccagcgcc
     1621 cgagcaaaga ggcgcgccgt ggaatccgcc agcggtcaaa gcgccgcagc cagcgccacg
     1681 cgcgtctcga acgtcagatg cccaagaggt gcttggcgtt cccgctcagg atcttggcct
     1741 tgtcggcgtc gctcagcggc acgcgcttca tccattccgt ggccggcggg ttcatcacga
     1801 acgggtagtc gacggcgaac aggatgcggt cgacgcccat ctccatgatg ctgcacagca
     1861 gcgccggatc ggaaaagttg ccgctcgtgg tgatgtagaa gttgttgcag aacacgtcgc
     1921 ggaagctgac cgccttctgg cccggccgcg caagggcgtg gtcgatgcgc cagacgagga
     1981 acggcagcgt ctcgcccaga tgccccagga tgatcttcag gtgcggatag cggtcgaaca
     2041 cgcccgacag cacgagccgg atcgcctgcg tcgccgtctc gaccgtgtag ccccaggcgg
     2101 cgcggatcac catcgggtaa tccttggcgt attccttgta gtaggcgtcc atcacggccg
     2161 ggtgcggcac cgacggatgc aggtagatcg gcacgtcgag cttttgcgcc cgcttgaaga
     2221 tcggccagaa gcgccggtcg tcgagaaaca ggccgtcggc gaggccgtgg atcatggcgc
     2281 ccttgaagcc gtgccgttcg accatgcgcg ccagctcgtc ggcggcagct tccgggtcgg
     2341 cggtcggcag cgccgcgaag ccggcgaagc gcgtcggatg cgccgcaatg acggcggcga
     2401 gccggtcgtt gacgcgccgc gtcacctcga cggcgacgtt ggccggcagc ttctgcgcgg
     2461 atggggcgcc gtgcgagagc acctgcatgt cgatgccggc ttcgtccatc tcacgcagac
     2521 gcagctcgcc gagatcggac aggcgcctcg cgatgtcggg cgcgcgcgtc gcctcgacgc
     2581 cggtgtaatg cgccgccatc tcgtcgtccc agtaatgctc ctcgagggcg atcaccggac
     2641 aattgggctt gtcgaacatg tttgcgccat tccccttttg cgcgcccttg ccagagcatg
     2701 atccggcgaa gtggccacca cttcgccgat aagatcatgc gacagaacga aaacttgagc
     2761 aggagcgctt caatctgaag cgatcctgct ctagcagccg ggcgggaggc gggaaaggga
     2821 gcccctcacc tcacgccagg cgccaactgc ccatgaacgg ccggccccgg cgcctgcagc
     2881 cggagcgcac cgccagatca gccggagcgc acctcaccag cccatcagct gcctggtcgc
     2941 ctgctcgttg tccttgagga atgtcttgta ggcctcgccc ttgatgattt ccggctgcag
     3001 ggcgagctgc tcggcgcggt cgcggtgatc cttggacgag agcacctttt cgagcgcctc
     3061 ggtcagccga gcctcgatag gcttcggcag ggaagcgggc gcggcgacgc cccgcgacac
     3121 cgacatgacg atgtcgaaac cctgctcgcg gaaggtcgac gcgtccggca ggaattttga
     3181 gcgttccgcc gacatcacgc cgagcagcct gagctgcccg ctcttcacct cctcggcgac
     3241 ctcgctgatg ttcgccccga gcacgtgcac gtggccgccg agggcctgcg ccttagcgtc
     3301 ggcggtgctg cggtggtgga tgacgccgaa cttcacgccg gcgcgggact gcacgcccag
     3361 gatgccgaga tggtcgtcgc tgccggcgcc gtaggccgtg atcgtgacct gctcgggcgc
     3421 cttcttcgcg gcctcgacca cgtcagcgac gctcttgtag gggctgtccg ccttcacggc
     3481 ccagacgttg tagtcgatca cgtggttcat cagcggcgtg aagctgtcga gcgtctcctt
     3541 gcggttgtac tggcggtcga gatagcccgc atacatgctc ggcacgttga gatagccgag
     3601 cgtgtagccg tcgggctgcg ccatggcgag cgtgccccag ccgatccagc cgccgcctcc
     3661 cgcgaggtt
//
LOCUS       DATAIQ010000490         1796 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_57735, whole genome shotgun sequence.
ACCESSION   DATAIQ010000490 DATAIQ010000000
VERSION     DATAIQ010000490.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1796)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1796)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1796
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_57735"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..329)
                     /locus_tag="VHN20_08130"
     CDS             complement(<1..329)
                     /locus_tag="VHN20_08130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725770.1"
                     /translation="MTLQFYPLRFSFEACDEIFFPPGKTGNILRGAFGVIFRKLACVP
                     HCTDARTCSLRAVCAYPRLFEPVAPDGPSGMNDAPRPFVFRAAHLDGRRIPPRARFHY
                     DMNLFELR"
     gene            complement(379..825)
                     /locus_tag="VHN20_08135"
     CDS             complement(379..825)
                     /locus_tag="VHN20_08135"
                     /inference="COORDINATES: protein motif:HMM:NF012309.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006801 - superoxide metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase family protein"
                     /protein_id="HEX2725771.1"
                     /translation="MVDAKGNRVGDVTLASHTDGVRLTGDLHDLPPGTHGTHIHSVGR
                     CDPPDFKSAGDHFNPAAKQHGDQNPQGAHAGDLGNITIGQDGKGQFEAIAKGVTIEAG
                     AASLARPGGTSLVIHAREDDRKSDPSGNSGERIACGVFASASGGPR"
     gene            complement(984..1451)
                     /locus_tag="VHN20_08140"
     CDS             complement(984..1451)
                     /locus_tag="VHN20_08140"
                     /inference="COORDINATES: protein motif:HMM:NF042610.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6789 family protein"
                     /protein_id="HEX2725772.1"
                     /translation="MSTPHDILLGAAAGLAATGPMTAVMKALHTQLPPGEQYPLPPRQ
                     ITMNVARTAGVEPVRESDRKALTIASHFAYGAACGALYAGVADRLPGHPVAKGIGFGL
                     AVWAGSYLGWLPAAGLLSPATEHPARRNALMIAAHVVWGATAGAAYSRMAEEA"
     gene            complement(1448..>1796)
                     /locus_tag="VHN20_08145"
     CDS             complement(1448..>1796)
                     /locus_tag="VHN20_08145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEX2725773.1"
                     /translation="PATAALRAGYFGASTGGGAALVAAAASPEQVFAVVSRGGRPDLA
                     GAALEHVRAPVLLLVGGDDGPVIDMNREAYAQLRCPKRLEIIPGAGHLFEEPGALEHV
                     MLLAREWFEQHLR"
BASE COUNT          293 a          575 c          641 g          287 t
ORIGIN      
        1 cgaagctcga agaggttcat gtcgtagtgg aagcgcgcgc gcggcggaat gcggcgtccg
       61 tcgaggtgcg cggcgcgaaa gacaaacggg cggggcgcat cgttcatgcc ggaaggccca
      121 tcgggcgcga cgggttcgaa cagccgcgga taagcgcaga cggcacggag agagcaggtg
      181 cgagcgtcag tgcaatgcgg gacgcaggcc agtttccgga aaatcacgcc aaaggcgccg
      241 cgcaggatgt tccctgtttt gcccggcggg aaaaagattt cgtcgcaggc ttcgaacgag
      301 aagcgcagcg gatagaattg cagcgtcacg cctcgcccat tgtctcgcaa gggcaggcga
      361 agcgcggaac ggggcgggtt agcggggtcc gccggaagcg ctggcgaaca cgccgcaggc
      421 gatgcgttcg cccgaattgc cgctcggatc cgacttgcga tcgtcttcgc gggcgtgaat
      481 caccagggag gtgccgccgg ggcgcgccag cgatgcggcg cccgcctcga tggtcacacc
      541 cttggcaatc gcctcgaact gccctttgcc gtcctgcccg atcgtgatgt tgccgaggtc
      601 gccggcatgg gcgccctgcg ggttctgatc tccgtgctgt ttggcggcgg ggttgaagtg
      661 gtctccggcc gatttgaaat cgggcgggtc gcagcgtccg accgaatgga tgtgcgtgcc
      721 gtgcgtgccg ggcggcaggt cgtggaggtc gccggtcagg cgcacgccgt cggtgtgact
      781 cgcaagggtg acgtcaccga cgcgattccc cttggcatcg accatttcga ttcgacctcc
      841 gctagccgcg gcgctgcggg cattatcctg cgcggcggag ttgttgcccg atgcctcgcg
      901 acgatcgccc gtattctgcg gattacagcc ggacaggacc agggcagcgc cggcgcacgc
      961 ccacacagcg aaccgcagcc tcatcacgcc tcctccgcca tgcgtgagta cgctgccccg
     1021 gccgtggcac cccagacgac gtgggctgcg atcatgagcg catttcgacg ggccggatgc
     1081 tcggtggcgg gcgagaggag tccggcagcc ggcagccatc cgagataact cccggcccag
     1141 actgcaagcc cgaagccgat gcctttcgcc accggatgtc ccggcaggcg atccgcgacg
     1201 ccggcgtaca gcgcgccgca cgccgcgccg tatgcgaagt gggacgcgat cgtcagtgcc
     1261 ttgcgatccg attcgcgcac gggttcgact ccggcggttc gcgcaacgtt catggtgatc
     1321 tgccgagggg gcagcggata ctgctcgccg ggcggcaact gcgtgtgcag cgctttcatg
     1381 acggctgtca tcgggccggt tgccgccagc ccggcggcag cgccaagcag aatgtcgtgt
     1441 ggtgtgctca tcgtagatgc tgttcaaacc attcgcgcgc gagcagcatg acgtgctcga
     1501 gcgctcccgg ctcttcaaat agatgaccgg cgccgggaat aatttccaat ctcttggggc
     1561 accggagctg cgcgtaggcc tcgcggttca tgtcgatgac ggggccgtcg tccccgccga
     1621 ccaggagcag gacgggcgca cgaacgtgct cgagcgcggc gccggctaag tccgggcggc
     1681 ctccgcggga gactaccgcg aagacctgct ccggggaggc cgcagcagct accagcgcgg
     1741 ctcctccgcc cgtgctggcg ccgaagtatc cggcgcggag ggccgcggtt gcagga
//
LOCUS       DATAIQ010000491         2195 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_302924, whole genome shotgun sequence.
ACCESSION   DATAIQ010000491 DATAIQ010000000
VERSION     DATAIQ010000491.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2195)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2195)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2195
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_302924"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..317)
                     /locus_tag="VHN20_08150"
     CDS             complement(<1..317)
                     /locus_tag="VHN20_08150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012319781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX2725774.1"
                     /translation="METPLLSVRDLAVDFHTDSGHFRAVDGLSLDVPRGKTVAIVGES
                     GSGKSVTAQAILRILPKVARITAGSIAFNDPAGPQSSVDIAGLSTFGDRQSSVPRLVH
                     INT"
     gene            complement(361..>2195)
                     /locus_tag="VHN20_08155"
     CDS             complement(361..>2195)
                     /locus_tag="VHN20_08155"
                     /inference="COORDINATES: protein motif:HMM:NF016027.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016758 - hexosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX2725775.1"
                     /translation="GGMPVKLIDMAGLRSVQLPPVRTAGTDFRTLLDEDGRAIAPERL
                     AMRRGRLLGALDELRPDVVVTELFPFGRRVLAQEFMALVERARALHPAPLILSSVRDI
                     LVAPARPDRIAEAHARLRAFYDGVLVHGDPGLVPLDASWPLDDGVRPLIRYTGYVDAD
                     PPVAASRGEPAAGGDIVVSGGSSAASMPLYRAATGAGSLLPAHRLRVLVGAGTPGEAF
                     ADLRDAAPGNVTVERARPDFRHLLAGAALSVSQSGYNTVIDVLRAGVGAVFVPFEAGH
                     ETEQRLRAERLQALGLAEIVAEAELSAATLADVMRRALQRRPGAAPPIRLDGAERSVA
                     VVEELARQRGPARASTGRPFRWAALDSALAQLADAGTSVAFWWRDDDAVANTPQLGRL
                     LALARRFELPIALAVIPRALQASLADRLADEPLAAVLVHGLSHVNHARPDEKKAEFGP
                     HRSLDRLADDAAQGLAASRAGFAGRAVPVFVPPWNRVAPELPPLLPGLGFAGLSTFGD
                     RQSSVPRLVHINTHIDPIDWRQGRGLRPPEALVAEVVRIVQARASGANRAGPIGLLTH
                     HLVHDEATWAFCEELLGRLAAHSSVRFHTADAVFLRDNVVAGLS"
BASE COUNT          351 a          755 c          816 g          273 t
ORIGIN      
        1 tgggtattga tgtgcaccag gcgagggacg gaggactggc ggtcgccgaa tgtcgagagc
       61 ccggcgatgt cgaccgatga ttgcggcccc gccgggtcgt tgaaggcgat cgatccggcc
      121 gtgatgcggg cgaccttggg caggatgcgc aggatcgcct gtgcggtcac cgacttgccg
      181 gagccggatt cgccgacgat ggcgacggtc ttgccgcgcg ggacgtccag cgacaggccg
      241 tcgacggcgc ggaaatggcc cgagtccgtg tgaaaatcga ccgcgagatc gcggaccgac
      301 aaaagcggtg tttccatccc agcctcgatc gccggaccca tcttatgttc tagggcgata
      361 ctacgacaat ccggcaacga cattgtcgcg cagaaagacc gcatcggccg tgtggaagcg
      421 cacagacgaa tgcgccgcca gtcgccctag cagttcctcg cagaaggccc aagtcgcttc
      481 gtcatgcacc aggtgatgcg tgagaagccc gatcgggcca gcgcgattcg cgccgctcgc
      541 gcgggcctgc acgatccgga ccacctccgc cacgagcgcc tcgggcggcc gcagtccgcg
      601 gccctgccgc cagtcgatcg ggtcgatatg ggtattgatg tgcaccaggc gagggacgga
      661 ggactggcgg tcgccgaatg tcgagagccc ggcgaagccg agccccggga gcagcggcgg
      721 caactccggc gcgacccggt tccagggtgg cacgaaaacc ggcacggcgc ggcctgcgaa
      781 tccggcgcgg ctcgctgcca ggccctgcgc cgcatcgtcc gccagccggt cgaggctgcg
      841 gtgcgggccg aattccgcct tcttctcgtc gggccgcgcg tgattgacgt gagaaagccc
      901 atgcaccagc acggccgcga gcggctcgtc ggcaagacga tccgccaggg aggcttgcaa
      961 cgctcgcggt atgacggcga gggcgatcgg cagctcgaaa cggcgtgcga gcgcgagcag
     1021 cctgcccaac tgaggtgtat tggcgacggc gtcgtcatcg cgccaccaga aggcgaccga
     1081 cgtcccggcg tcggcaagct gcgccagggc ggagtcgaga gctgcccagc ggaacggccg
     1141 accggttgat gcgcgcgccg gcccgcgttg ccgtgcgagc tcttccacga cggcgacgct
     1201 gcgttcggcg ccgtcaagcc tgatcggcgg tgccgcgccg ggacggcgtt gcagcgcgcg
     1261 ccgcatcacg tcggccaggg tcgcggccga cagctccgct tccgcgacga tctcggcgag
     1321 gccgagcgcc tgcaggcgct cggcgcgcag ccgctgctcg gtttcgtggc ccgcctcgaa
     1381 cgggacgaag acggcgccga cgccggcgcg cagcacgtcg atgacggtgt tgtagccgga
     1441 ctggctcacg gacagggcag cgccggcaag caggtggcgg aagtcgggcc gcgccctctc
     1501 cacggtgacg ttgcccggcg ccgcgtcccg caagtcggcg aacgcctcgc cgggagtgcc
     1561 ggcgccgacg aggacgcgca agcggtgcgc ggggaggagg gagccggccc ccgtcgccgc
     1621 ccggtaaagc ggcatgctgg cggcgctcga gccgcccgaa acgacgatgt cgccaccggc
     1681 cgccggctcg ccgcgggatg cggcaaccgg cgggtcggcg tcgacatagc cggtgtagcg
     1741 gatcaggggg cgcacgccgt cgtcgagcgg ccacgacgca tcgagcggca ccaggcccgg
     1801 gtcgccgtgc acgagcacgc cgtcgtagaa ggcacgcagc cgcgcatgcg cctcggcgat
     1861 gcggtcgggc cgtgcgggcg cgaccaggat gtcgcggacg gaggaaagga tcagcggcgc
     1921 cgggtgcaac gcgcgggccc gctcgacgag cgccatgaat tcctgcgcca gcacacgccg
     1981 gccgaacgga aacaactcgg tcacgacgac gtcggggcgc agctcgtcga gcgcgccgag
     2041 aaggcgcccg cgccgcatcg cgagccgctc cggcgcgatc gcccggccat cctcgtcgag
     2101 cagggtccgg aaatcggtgc cggccgtccg cacgggcggc agctgcacgc tgcgcaagcc
     2161 ggccatgtcg atgagcttga ccggcattcc gcccg
//
LOCUS       DATAIQ010000492         1859 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_25641, whole genome shotgun sequence.
ACCESSION   DATAIQ010000492 DATAIQ010000000
VERSION     DATAIQ010000492.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1859)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1859)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1859
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_25641"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(210..1226)
                     /locus_tag="VHN20_08160"
     CDS             complement(210..1226)
                     /locus_tag="VHN20_08160"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX2725776.1"
                     /translation="MRNIWATLRIVQGCGAALALGFVALSASDARAQYQVVVTNYGVS
                     ANGMPFAIAKENKLFEAEGITVTEIITSAGGGTTLRNMMASSAPYAEINPAAAIGAIQ
                     QGLDLKIIAENVQTVAEFTWFSKKGSKFQKPADLKGARMGFNNPRSTSVALSGLLLDA
                     VGIKMDDVKMVRTGGFGESLAALEIDTIDVTPMTEPLWSQYKDKYHAIAVASEVLPPL
                     SNVVAVALSSIDDKQKEFVRAVIRARRAAVKFMEDNPEKAGDIVAKHYNIPVDVARST
                     VKNLVTSRTQGIPYWGTGQIHYQGLDRMVKAQAAVGAIQGNVDLKAIIDTSLLPADIR
                     EVVR"
     gene            complement(1305..>1859)
                     /locus_tag="VHN20_08165"
     CDS             complement(1305..>1859)
                     /locus_tag="VHN20_08165"
                     /inference="COORDINATES: protein motif:HMM:NF025091.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase/phosphoenolpyruvate mutase
                     family protein"
                     /protein_id="HEX2725777.1"
                     /translation="QRADKSSAVVDEMVIELKLRTALATRSSRETLIIGRTDAYGALG
                     LDAALRRGERFFDLGVDAVFVAGLRTPEDYARVGDKLKGGVLIAAMFETPGMPWLSPA
                     ELGRMGFAQVTYPVSLIYRAVAAMRTGLAELRAFGIGKAAMTPMAAAAETGAALDDAV
                     EVARWREMEQRFTALLANEEATAS"
BASE COUNT          282 a          604 c          612 g          361 t
ORIGIN      
        1 gcagcggacc gccgaaacac tttcgtcacc ttcctgatgg ctacgtccgt tgcgcttcgc
       61 acgggcaggg tgacgttcac agcttacctc gctggcggag tggaactggc tttagcggga
      121 ttgcttcaga tcgaatccat cccgctctgc ttttccttga gccgcatgat ctttttcggc
      181 gaagtggtat ccacttcgcc cgctcatgct cagcgaacga cctcgcggat gtcggcgggc
      241 aaaaggctcg tgtcgatgat ggctttcagg tcgacattgc cctggatggc gccgaccgct
      301 gcctgcgcct tcaccatgcg gtccagcccc tggtaatgga tctggcccgt gccccagtag
      361 ggaatgccct gggtgcgcga ggtgaccagg ttcttgaccg tcgagcgcgc cacgtcgacg
      421 gggatgttgt agtgcttggc gacgatgtcg ccggcctttt ccggattgtc ctccatgaac
      481 ttgacggcgg cgcggcgcgc ccggatcacg gcgcggacga actccttctg cttgtcgtcg
      541 atgctggaaa gcgcgacggc gacgacgttc gacagcggcg ggagcacctc actggcgacc
      601 gcgatcgcgt gatacttgtc cttgtactgg gaccacaggg gctcggtcat cggcgttacg
      661 tcgatggtgt cgatctccag ggcggcgagg ctctcgccga agccgccggt gcgcaccatc
      721 ttgacgtcat ccatcttgat gccgacggcg tcgagcagga gcccgctgag cgccacgctg
      781 gtcgagcgcg gattgttgaa gcccatgcgg gcgcccttca agtcggcggg cttctggaac
      841 ttggagccct tcttcgagaa ccaggtgaat tccgcgaccg tctgcacgtt ctcggcgatg
      901 atcttgaggt ccagcccctg ctggatcgcg ccgatcgccg cggccgggtt gatctcggca
      961 taaggggcgc tggacgccat catgttgcgg agggtggttc cgccgccggc ggaggtgatg
     1021 atttccgtca ccgtgatgcc ttccgcctcg aagagcttgt tctccttggc gatggcgaac
     1081 ggcatgccgt tcgccgagac gccgtaattg gtgacaacga cttgatattg ggcacgtgcg
     1141 tcggaagccg acagcgccac aaagccaagc gccagcgcgg cgccgcaacc ctgcacgatc
     1201 cgtagggtcg cccaaatgtt cctcatagcg tcctcctgtc ttctctcttg ttgtggttcc
     1261 cctggcggcg ccgttcatcg ttcgtccgaa cggtgggccg gatgtcacga tgcggtcgcc
     1321 tcctcgttcg caagcagtgc cgtgaagcgc tgttccatct cgcgccagcg cgccacctcg
     1381 accgcgtcat cgagcgccgc acccgtttct gccgcggcgg ccatgggcgt catggccgcc
     1441 ttgccgatgc caaacgcgcg gagctccgcg agcccggtcc gcatcgccgc gacggcccgg
     1501 tagatcagcg aaaccggata ggtgacctgc gcgaaaccca tgcggccgag ctcggcaggc
     1561 gagagccacg gcatgcccgg ggtctcgaac atggccgcga tcaggacgcc gcctttcagc
     1621 ttgtcgccga cccgggcgta gtcttcggga gtgcgcaggc cggcgacgaa gacggcgtcg
     1681 acgccgaggt cgaagaaccg ctcgccgcgc cgcagggccg cgtcgaggcc gagcgcgccg
     1741 taggcgtcgg tccggccgat gatcagcgtc tcgcggctgc tgcgggtggc aagcgcggtc
     1801 cggagcttca gctcgatgac catttcgtcg acgaccgctg acgacttgtc ggcgcgctg
//
LOCUS       DATAIQ010000493         7699 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_395168, whole genome shotgun sequence.
ACCESSION   DATAIQ010000493 DATAIQ010000000
VERSION     DATAIQ010000493.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 7699)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7699)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7699
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_395168"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..360
                     /locus_tag="VHN20_08170"
     CDS             <1..360
                     /locus_tag="VHN20_08170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018429021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromate resistance protein ChrB
                     domain-containing protein"
                     /protein_id="HEX2725778.1"
                     /translation="VEVARELDGVAYDLPGGRFEHDGPLCTFDTLLAAFGLDADARLG
                     ELALIVRGADTDRLDLTPQCAGLLAVALGLSAQHGDDDHAVLRHGFVVYDALYSWLRH
                     ARAERHNWPRATAGKAA"
     gene            complement(367..849)
                     /locus_tag="VHN20_08175"
     CDS             complement(367..849)
                     /locus_tag="VHN20_08175"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019904910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX2725779.1"
                     /translation="MSGPRKRPPLSVTIRAAAPGDIDVLLDIENAVFPTDRLDRRAFR
                     HAIRSPTIICLVASRRAEVLGYVTVERRRNSGTGRLTSIAVAPRAAGARVGRRLLAAA
                     EKAAQAATLSRLRLEVRAGNARARRLYEHAGYRALETLDDYYEDGAAALRYEKALASS
                     "
     gene            complement(846..2396)
                     /locus_tag="VHN20_08180"
     CDS             complement(846..2396)
                     /locus_tag="VHN20_08180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019904911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030246 - carbohydrate binding [Evidence
                     IEA];
                     GO_process: GO:0009250 - glucan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucan biosynthesis protein G"
                     /protein_id="HEX2725780.1"
                     /translation="MVHLSRRTVVHGLAALAAASPALAQQKSGPTAFRFEDVIRRARE
                     LAGVPHDPAVPPLPEPLSRLDFDAYRDLRFRPDRALLGTGGSPFRMHLFHLGFLYQRP
                     VTVNVIRDGVPTPVAYQPQLFDYGRTKIERPLPVNLGFAGFRLHYPLNDPRTFDELIA
                     FLGSSYFRFLGRGQRYGLSARGLAVNVDGNGSEEFPFFREFWVDSPAAGADKAVVYAL
                     LDSPSTTGAYRFEVYPAGETTLDVAVTLFPRRTVPGVGLAPLTSMFFTGENDRHRHDD
                     FRPELHDSDGLLLHTASGEWIWRPLHNPTRKWVSAFVDSNPRGFGLMQRDRVFENYQD
                     LEANYNLRPGYWVEPIGNWGDGHVELLELPTSNETMDNVVAYWRPKQPYEAGQEISFG
                     YRMRAVSDTDNMHPGGKVVNTFQAPARASGAPDPSDPTTRRFMVDFAGGNLSYYMQAP
                     EQVQVVPTTSVGKITHTFIVPNEHIRGFRAAFDVKLDAGQSTDLRVYLRAGNKALTET
                     WTHPWTAG"
     gene            3064..4212
                     /locus_tag="VHN20_08185"
     CDS             3064..4212
                     /locus_tag="VHN20_08185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015950803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III PLP-dependent enzyme"
                     /protein_id="HEX2725781.1"
                     /translation="MTERIRDFLRNRREDGPCLVVDLDVVRDNYMKFARALPNTRVFY
                     AVKANPAPEILRLLTLLGSCFDAASVAEIEMVLAAGATADRISVGNTIKKERDIVRAL
                     ELGVRLFAVDCEAEVDKVVRATKATRADEVKVFCRILSDCAGAEWPLSRKFGCAPEMA
                     VEVLEHAHRHKLEAYGVSFHVGSQQRNTKAWDVALASASAVFRECAERGIHLAMVNLG
                     GGFPTKYLKSIPAVEAYGEAIFRALTKHFGNRIPETIIEPGRGMVGNAGVIESEVVLV
                     SKKSREDDEVRWVYLDIGKFGGLAETMDESIRYPIRTGRDDDKLVPCVLAGPTCDSAD
                     VLYEKEPYMLPFSLEIGDKVLIEGTGAYTTTYSAVAFNGFPPLKSYVI"
     gene            4345..4917
                     /locus_tag="VHN20_08190"
     CDS             4345..4917
                     /locus_tag="VHN20_08190"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HEX2725782.1"
                     /translation="MITIRDERPADIAAREELLDACFGDERFEKTSERLRDRRLPASG
                     LALVIEANQKIVGTVRLWPVTVGGNRPALLLGPLAIDPVLHSLGLGSKLMRVALNRAA
                     MLGHGAVLLVGDAPYYKRFGFSAEPTRHLRLPGPVERERFLALELKPGALAGARGLVR
                     AAGERDPMPAALPALVAAKMRGSLVERAAA"
     gene            5145..6578
                     /locus_tag="VHN20_08195"
     CDS             5145..6578
                     /locus_tag="VHN20_08195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012606114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homospermidine synthase"
                     /protein_id="HEX2725783.1"
                     /translation="MTTTWPVYGRIDGPIVMIGFGSIGKGTLPLIERHFEIDRERFVV
                     IDPSDKDRDLLDRRGIRFIQAALTRDNYREVLTPLLTNGGGRGFCVNVSVDTSSRDIM
                     ALSRELGCLYIDTVAEPWAGFYFDKSKGPEARTNYMLREDILDLRRRTPGGPTAISCC
                     GANPGMVSWFVKQALLNVAGDLGLDVKEPTTREEWARLMQRVGVKGVHIAERDTQRAT
                     SEKPIGVFVNTWSVEGFVSEGVQPSELGWGTHEKWMPANAGTHKVGSGAAIYLLQPGA
                     NTRVRTWCPTPGPQYGFLVTHNESISIADFFTVRENGEAVYRPTCHYAYHPCNEAVLS
                     LHEMFGQAGQVQDKHHILDEQEIVDGIDELGVLLYGHARNAYWYGSQLSIEETRRIAP
                     YQNATGLQVTSAVLAGMVWALENPEAGIREADEIDFRRCLEVQMPYLGPVNGFYTDWT
                     PLTGRPGFFPEDIDPSDPWQFRNVLVR"
     gene            complement(6643..7188)
                     /locus_tag="VHN20_08200"
     CDS             complement(6643..7188)
                     /locus_tag="VHN20_08200"
                     /inference="COORDINATES: protein motif:HMM:NF022605.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2937 family protein"
                     /protein_id="HEX2725784.1"
                     /translation="MPGLVRTIAAAMGLVGGVVASQGPEFAQQYRQRLGGAIDELQRV
                     IQRFDTDAVANGQSRTNAIDRLRGSPDNLVSRQGDAMRANVERLERLQRHRQEFSEAG
                     AFDRLLTLLRDADIDLAEATYHDFEPAVPATQEGVVAASAGVVIGWGLTLLTIGFSRR
                     LFRLGRRDTWRPASSRLREET"
     gene            complement(7320..>7699)
                     /locus_tag="VHN20_08205"
     CDS             complement(7320..>7699)
                     /locus_tag="VHN20_08205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015822798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="WD40 repeat domain-containing protein"
                     /protein_id="HEX2725785.1"
                     /translation="MSGYPSKTRSLAWSHDGHWLATSGAEAAIIWPFNSKEGPMGKQP
                     RECGVRPVKVTRVAFHPGAYLLATGYEDGCILLIRLTDASELLVRAPRADSGITALTW
                     DAKGRRLAFGCEDGQAGFLTLPE"
BASE COUNT         1263 a         2549 c         2651 g         1236 t
ORIGIN      
        1 gtggaggtgg cgcgcgagct cgacggcgtc gcctatgatc tgccgggggg ccgcttcgag
       61 catgacgggc cgctctgcac cttcgacacg ctgctcgcgg ccttcggcct cgacgccgat
      121 gcgaggctcg gcgagctggc gttgatcgtc cggggcgccg ataccgaccg gctcgatctc
      181 acgccgcaat gcgcgggcct cctggctgtg gcgctggggc tgtcggcgca gcatggcgac
      241 gacgaccatg cggtgctgcg gcatggcttc gtcgtctacg acgcgctcta cagctggctg
      301 cggcacgcgc gcgcggagcg tcacaactgg ccacgcgcta ccgccggcaa ggcggcgtga
      361 cgcgcgtcag gacgaggcga gggccttctc gtaacgcagg gcggcggctc cgtcctcgta
      421 ataatcgtcg agggtctcga gcgcgcgata gccggcgtgc tcgtataggc gccgggctcg
      481 cgcgttgccg gcgcgaactt caaggcgaag gcggctgagc gttgcggcct gcgccgcctt
      541 ctcggccgcc gcgagcaggc ggcgtccgac ccgggccccc gcggcgcgcg gcgcgacggc
      601 gatcgacgtg agtcggccag tgccgctgtt gcgccgccgc tcgacggtga cgtagccgag
      661 cacctcggcg cgccggctgg cgaccaggca gatgatggtc ggcgagcgga tcgcatggcg
      721 aaaggcgcgc cggtcgaggc ggtcggtcgg gaagacggcg ttctcgatat cgagcaggac
      781 gtcgatgtcg ccgggagcag cggcccggat cgtgacggag agcggcggcc gcttgcgcgg
      841 gccgctcacc cggcggtcca cggatgcgtc caggtctccg tcagggcctt gttgccggct
      901 cgcagataca cgcgcaggtc ggtcgactga cccgcgtcga gcttgacgtc gaaggcggcg
      961 cggaagccgc ggatgtgctc gttcggcacg atgaaggtgt gcgtgatctt gccgaccgag
     1021 gtcgtcggca cgacctgcac ctgttccggc gcctgcatat aataagagag gttaccgccg
     1081 gcgaagtcga ccatgaaccg gcgcgtggtc ggatcgctcg ggtccggagc gccgctggcc
     1141 cgcgccggcg cctggaacgt gttcacgacc ttgccgcccg gatgcatgtt gtcggtgtcc
     1201 gagacggcgc gcatgcgata gccgaacgag atctcctggc ccgcctcgta gggctgcttc
     1261 gggcgccagt aggcgacgac gttgtccatg gtctcgttgc tggtcggaag ctcgaggagt
     1321 tcgacatgcc cgtcgcccca attgccgatc ggctcgaccc agtagcccgg gcgcagatta
     1381 tagttcgcct cgagatcctg atagttctcg aacacccggt cgcgctgcat gagcccgaag
     1441 ccgcgcgggt tgctgtcgac gaaggccgac acccatttgc gcgtcgggtt gtgcagcggc
     1501 cgccagatcc attcccccga agccgtgtgc agcaggagcc cgtcggaatc gtgcagctcc
     1561 gggcggaaat cgtcgtgccg atggcggtcg ttctcgccgg tgaagaacat cgacgtgagc
     1621 ggcgccaggc cgacccccgg tacggtccgg cgcgggaaca gcgtaaccgc cacgtcgagg
     1681 gtggtctcgc cggcgggata aacctcgaag cgataggcgc cggtggtgga ggggctgtcg
     1741 agcagcgcat agacgaccgc cttgtcggcg ccggcggcag gcgagtcgac ccagaattcg
     1801 cgaaagaagg gaaactcctc gctgccgttg ccgtcgacgt tgacggcaag cccgcgggcg
     1861 gagaggccgt agcgctgccc gcggccgagg aagcggaaat aactcgagcc gaggaaggcg
     1921 atcagctcgt cgaaggttcg cggatcattg agcgggtagt gcagccggaa cccggcaaag
     1981 ccgagattga ccgggagcgg ccgctcgatc ttggtgcggc cgtagtcgaa cagctgcggc
     2041 tgataggcga cgggcgtcgg cacgccgtcg cggatcacgt tcaccgtcac cggccgctgg
     2101 tagaggaagc caaggtgaaa caggtgcatc cggaacgggc tgccgcccgt gccgagaagc
     2161 gcccggtcgg gccggaagcg gaggtcgcgg taagcgtcaa aatcgagccg gctcagtggt
     2221 tccggcagcg gcggcacggc gggatcgtgg ggaaccccgg cgagctcgcg cgcgcggcgg
     2281 atcacatcct cgaagcggaa cgcggtcggc ccactcttct gttgggcaag agccgggctg
     2341 gccgcggcaa gcgcggcaag gccgtggaca acggtgcggc gggacaaatg gaccatgaac
     2401 gggacgcgac gccaaattct tgaggctgat tgagctcgac agttaagcga ggccgtcgcc
     2461 cgcgtccacc ggcaagcccg cgacgcagtg ccatgcgatc ggttaagcta aattttcacc
     2521 ctgtgacgcc ctttatcggg aaaaattgcg ggaacccctt gagattcccg ggaatcgctc
     2581 gtatctaacc cctgcccaat ttcgcacgtg cctgtggccg cgtgctggtc ggtgggcatc
     2641 cggacaagag gccggacagc cgccagggac atgggttcgc tctcgggggg attggatatc
     2701 cccgaggcaa ggaccccggc gaaagccgcg tcccgaacaa cgaccggcag ccggaggcga
     2761 aaccggcgaa ccccgctctc cacgggggac gcagcttaaa gcaacgacgg agcgggcttt
     2821 tttggtctca gccggtttcc aaatccggcg actgaagagg cttgtccatc ttgcccggcg
     2881 tgcggttggg gtctccccat ccaaacaaag gcagcttctc gggcgaagag cccatccgct
     2941 tgtcgtgtct ccatcgcacg gccggcgcga tgaccttcac ctgctgagcc gggcggcttt
     3001 gccgcctgaa ctttcaacca gggcgtaaca gcgcccgatt gaacctttgg tggggacagc
     3061 gccatgaccg agcgcatccg tgacttcctg cgcaaccgac gcgaagacgg gccgtgcctc
     3121 gtcgtcgacc tcgacgtcgt gcgtgacaac tacatgaaat tcgcccgggc gctgcccaac
     3181 acgcgcgtgt tctacgccgt gaaggccaat cctgcgcccg agatcctgcg cctgctgacg
     3241 ctgctcggct cgtgcttcga cgccgcctcg gtcgccgaga tcgagatggt gctcgcggcc
     3301 ggcgccacgg cggaccgcat ctccgtcggc aacacgatca agaaggagcg cgacatcgtg
     3361 cgcgcgctcg agctcggcgt gcgcctattc gcggtcgatt gcgaggccga ggtcgacaag
     3421 gtggtgcgcg ccacgaaggc gaccagggcc gacgaggtca aggtcttctg ccgcatcctc
     3481 agcgattgcg ccggcgccga atggccgctg tcgcgcaagt tcggctgcgc gccggagatg
     3541 gcggtcgagg tgctcgagca cgcccaccgg cacaagctcg aagcctacgg cgtgtcgttc
     3601 catgtcggct cgcagcagcg caacaccaag gcctgggacg tggcgctcgc ctcggcctcg
     3661 gcggtgttcc gcgaatgcgc cgaacgcggc atccatctcg cgatggtcaa tctgggcggc
     3721 ggttttccga ccaagtacct gaagagcatt ccggccgtcg aagcctatgg cgaggcgatc
     3781 ttccgggcgc tcaccaagca cttcggcaac cgcattcccg agacgatcat cgagccgggc
     3841 cgcggcatgg tcggcaacgc gggcgtgatc gagtccgaag tcgtgctcgt atcgaagaag
     3901 tcgcgcgagg atgacgaggt gcgctgggtc tatctcgaca tcggcaagtt cggcggcctc
     3961 gccgagacga tggacgagtc gatccgctac ccgatccgca ccgggcgcga cgacgacaag
     4021 ctcgtgccgt gcgtgctcgc cggcccgacc tgcgactcgg cggacgtgct ctacgagaag
     4081 gagccgtaca tgctcccgtt cagtctcgag atcggcgaca aggtgctgat cgagggcacg
     4141 ggcgcctata cgaccaccta ctcggcggtg gccttcaacg gctttccgcc gctgaagagc
     4201 tacgtcatct gacgaggcgt ccacgcctcg tcatcccggc ctgagcgagg cgaagagccg
     4261 ggatcgtctc ccatttcaat cgtcaagcgt tcccggacgc ggtcgtgaga ccgcgtccgg
     4321 gatgatgcct gagggtgcag gatgatgatc acgatccgcg atgaacgccc cgccgatatt
     4381 gccgcgcgcg aggagctcct cgatgcgtgc ttcggcgatg aacgcttcga gaagaccagc
     4441 gagcgcctgc gcgaccgccg cctgccggcc tccggcctgg ccctcgtcat cgaggcgaac
     4501 cagaaaatcg tcggcacggt gcgcctgtgg ccggtcaccg tcggcggcaa ccggccggcg
     4561 ctgctgctcg gcccgctggc gatcgacccg gtcctgcaca gcctcggcct cggctcgaag
     4621 ctgatgcgcg tcgcgttgaa ccgtgccgcc atgctcgggc atggcgccgt gctgctggtc
     4681 ggcgacgcgc cctattacaa gcgcttcggc ttctcggcgg agccgaccag gcatctgcgc
     4741 ctgcccgggc cggtcgagcg cgagcgcttc ctggccctcg agttgaaacc cggcgccctg
     4801 gccggagcgc gcggcctcgt ccgcgcggcc ggcgagcgcg acccgatgcc ggcggctctg
     4861 ccggcgctcg tcgccgccaa gatgcgcggc tcgctcgttg agcgcgcggc cgcataaggc
     4921 aaccggccgc gcgcctcgcg cgttgcatgc ggttgggctc gccgcagggc ttcactcgag
     4981 cgggatcgat ccaggttgaa tcgatgccgc tctcaatgtc tttgaaacgc atgatctttc
     5041 tcgcgaggcg gtgtccactg cgcggatcat gctctaagaa cccggacgcc cgcacggcgc
     5101 cgcgccgtcg tcactttgtt gtcccgtagc gaggagagta gcgcatgacg accacctggc
     5161 ccgtgtacgg ccgcatcgac ggcccgatcg tcatgatcgg cttcggctcc attggcaaag
     5221 gcacgctgcc cctgatcgaa cggcacttcg agatcgaccg cgagcggttc gtggtgattg
     5281 acccgtccga caaggaccgc gacctgctcg accgccgcgg catccgcttc atccaggcgg
     5341 ctctcacgcg agataattat cgcgaggtgc tgaccccgct gctgaccaac ggcggcggcc
     5401 ggggtttttg cgtcaacgtc tcggtcgaca cctcgtcgcg ggacatcatg gccctctcgc
     5461 gcgagctggg ctgcctctac atcgataccg tcgccgagcc ctgggccggc ttctacttcg
     5521 acaaaagcaa agggccggag gcgcgcacca actacatgct gcgcgaggac atcctcgatc
     5581 tgcgccgccg cacccccggg gggccgacgg cgatctcgtg ctgcggcgcc aatcccggca
     5641 tggtgtcgtg gttcgtcaag caggcgctgc tcaacgtcgc cggcgatctg ggcctcgacg
     5701 tcaaggagcc gacgacgcgc gaggaatggg cgcggctcat gcagcgcgtc ggcgtcaagg
     5761 gcgtccacat cgccgagcgc gacacgcagc gcgccacctc cgagaagccg atcggcgtgt
     5821 tcgtcaacac ctggtcggtc gaaggcttcg tgtcggaagg cgtgcagccg tcggagctcg
     5881 gctggggcac gcacgagaaa tggatgccgg ccaatgccgg cacgcacaag gtcgggtcgg
     5941 gcgcggccat ctacctgctg cagccgggcg ccaacacgcg cgtgcgcacg tggtgcccga
     6001 cgccggggcc gcaatacggc ttcctcgtca cgcataacga gtcgatctcg atcgcagact
     6061 tcttcacggt gcgcgagaac ggcgaggccg tctaccggcc gacctgtcac tatgcctatc
     6121 acccgtgcaa cgaggccgtg ctgtcgctgc acgagatgtt cggccaggcg ggccaggtgc
     6181 aggacaagca ccacatcctc gacgagcagg agatcgtcga cggcatcgac gagctcggcg
     6241 tgctgctcta cggccacgcc aggaacgcct attggtatgg ctcgcagctc tcgatcgagg
     6301 agacgcgacg catcgcgccg tatcaaaacg caacgggact gcaggtcaca tccgccgtcc
     6361 tcgccggcat ggtgtgggcg ctcgagaacc cggaggcggg aatccgcgag gccgacgaga
     6421 tcgacttccg ccgctgcctc gaggtgcaga tgccctatct tggcccggtg aacggttttt
     6481 acaccgactg gacgccgctc accggccggc ccggcttctt cccggaggac atcgacccgt
     6541 cggacccgtg gcagttccgg aacgtgctgg tccgctagct acagcatgat ccggcgaagt
     6601 ggataccact tcgccgaaca agatcatgcg cctcaacgct atctaggtct cttcacgcaa
     6661 gcgggaagag gccggtcgcc aggtgtcccg acggccgagc cggaacaggc ggcgggagaa
     6721 tccgatcgtc agcagcgtca gtccccagcc gatgaccacg ccggcgctgg cggcgacgac
     6781 gccttcctgc gtcgccggca cggcgggctc gaagtcgtga taggtggctt cggcgaggtc
     6841 gatgtcggcg tcgcgcagca aggtgagaag gcggtcgaag gcgccggcct cactgaactc
     6901 ctggcggtgc cgttgcagcc gctcgagccg ctcgacattg gcgcgcatgg cgtcgccctg
     6961 gcggctgacg agattgtcgg gactgccgcg caagcggtcg atggcattcg tgcggctctg
     7021 gccgttggca acggcatccg tatcgaaacg ctggatgacc cgctgcagct cgtcgatggc
     7081 gccgccgagg cgctgccggt attgctgcgc gaattccggg ccttgcgagg cgacgacgcc
     7141 tccgaccagc cccatcgccg cggctatggt gcgcacgagc ccaggcacga tgctccctcc
     7201 tgactaaaca aagagcttcg cgcagatccg gttccccttg cggaggatcg cttgagcggc
     7261 tagcccaatc ttcctggcca cctgtctttt cggcaaagtg gcagccactt tgtcgtgctc
     7321 tattcgggta gagtgagaaa acccgcctgc ccatcctcgc aaccgaaggc gaggcgcctg
     7381 cccttggcgt cccaggtcag ggcggtgatg ccgctgtccg cgcgcggtgc gcgcacgagt
     7441 aattcggagg cgtcggtgag gcggatcagc aggatgcagc cgtcctcgta gccggtggca
     7501 agcaggtagg cgcccggatg gaaggcgacg cgcgtcacct tgaccgggcg cacgccgcat
     7561 tcgcgcggct gcttgcccat ggggccttcc ttcgagttga acggccagat gatcgccgcc
     7621 tcggcgcctg aggtcgccag ccagtggccg tcgtgcgacc acgccagcga gcgcgtcttg
     7681 gacgggtaac ccgacatgc
//
LOCUS       DATAIQ010000494         7474 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_395199, whole genome shotgun sequence.
ACCESSION   DATAIQ010000494 DATAIQ010000000
VERSION     DATAIQ010000494.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 7474)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7474)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7474
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_395199"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1284..2249)
                     /locus_tag="VHN20_08210"
     CDS             complement(1284..2249)
                     /locus_tag="VHN20_08210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006935312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS481 family transposase"
                     /protein_id="HEX2725786.1"
                     /translation="MNIHKNARLTPFGREQMVRAILGGQTPQAAARAAGVCPHTAHKW
                     LARFTAEGPAGLADRSSRPKRLRSQTSRAIVKRVIALRRQRLSGQHIAKTVGVSPATV
                     SRILKRAGLSRLKDLDPAEPVRRYERQHPGELIHIDIKKLGRFHQVGHRITGDRRGQS
                     RPRARGEGAGWEFVHVCIDDASRIAFTMIMPNEKALSAVAFLKAAVAYYQRLGITVAR
                     VMTDNGSCYKAFAFARACKRLKLKHVRTRPYTPKTNGKAERFIQTALREWAYARAYNS
                     SRERERQLQPWTHAYNWHRPHGSLKGSPPISRLGLNENNLLRLHS"
     gene            2429..3811
                     /locus_tag="VHN20_08215"
     CDS             2429..3811
                     /locus_tag="VHN20_08215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015928420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease"
                     /protein_id="HEX2725787.1"
                     /translation="MAVAALTAVVVLGCSPDAAMAQARPTPPAATKPDAAFDSAKVAF
                     EALPETERKAVQDALVWTGDFNAAVSGEFGRRTFDAINAYLARTRRPAAGTLDAPTRK
                     ALLASAQRARDAQKFTVLGDARTGVRIGVPQGILVKHDVNPNGGSRWQSADGRITLDT
                     RAVAPAEADLAALYERSIATQIPGRQVTYKLLRPDFFVVSGETPTGKFYQRYARGPAG
                     VRGFSIGYDKALAKDFDRAVIAIANSFAPFPEAAAVAAATPPPQPPPAAEPARPKPPL
                     ASGIVVAAGRIVTSATVAACTELRVAGARARVLKSDQAIGVALLESDAVAAKAPVAVR
                     SARADASVLVLSHAVDAGSRPGLVVTPADIVGGRLVAPLQPGASGAPVVDRTGALVGI
                     VGALRSTPNVVAGTVPPLAHPFIAAEPIAGLLSGSGVALANASEQPRRSAGEIAAALG
                     AAVVPVTCGE"
     gene            complement(3920..5893)
                     /locus_tag="VHN20_08220"
     CDS             complement(3920..5893)
                     /locus_tag="VHN20_08220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015932954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEX2725788.1"
                     /translation="MGDPEQPGVSSTSEGRFELLVSAITDYAIYMLDPTGIVTSWNAG
                     AQRFKGYEAPEIIGQHFSRFYTEGDREAGLPKHVLETAATEGRYENEGWRVRKDGTRF
                     WAHVIVDAIRDPAGRLVGFAKITRDLTERKFAADALKRSEEQFRLLVNGVTDYALYML
                     DPQGRITSWNSGAERIKGYRADEIVGEHFSRFYAAEDRARGEPQRGLDIAIREGRFEK
                     AGWRVRKDGTRFWANIVIDAIRDEAGELIGFAKITRDITERKEAERSLEQAREALFQS
                     QKMEAVGQLTGGIAHDFNNLLTAVLGSLELLRKRVPDDPKVLRLLDNAMQGAQRGASL
                     TQRMLAFARRQALKTEPVDVPALVRGMSELLQHSLGSSVRIETRFPLVLNMVCADENQ
                     LELALLNLAVNARDAMPDGGTIIIAARQESITTGHATRLPPGHYVCLSITDTGEGMDE
                     PTLARAMEPFFTTKGIGKGTGLGLSMVHGVTEQSGGRFVLKSRKGEGTTAELWLPVAE
                     VEGEQGADDKPAAESPHAVRPLVVLAVDDDNLVLLNTAALVEELGHTVLEASSAREAL
                     ALLQHEKHVDLVITDQIMPQTTGLQLAERIRAEWPNLPIILATGFAELPADADPTLHR
                     LDKPFGQKELAQAITAAMEAEQARGRVLKFRSR"
     gene            6514..>7474
                     /locus_tag="VHN20_08225"
     CDS             6514..>7474
                     /locus_tag="VHN20_08225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014762976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HEX2725789.1"
                     /translation="MPLQTLTTAIAAALLFATSAAAQNIQDRTIKVGIGLTADHPQGV
                     AVTKFGEIVAAKSGGKLKVRLFAGGAVGNDVTMISALQGGTLEMTVPDTSTLVGIQGL
                     KNFGLINLPFLFNKSEEADAVLDGPFGQKLLAQLPERGLVGLGFWENGFRHVSNSRRP
                     VAKAEDFAGLKLRVIQNPLFIDTFASLGASPQPMPFPEVYTALEQRVVDGQENPLATI
                     LASKFYEVQKYTVLSNHIYSVWALLMSKRFWDRLSADEKKIISDAAAEAQAFERQTIR
                     AFDREALEQLKSKGMQVTTLEAAEVAKLRDKTKGVWDKFTKEFG"
BASE COUNT         1181 a         2475 c         2540 g         1278 t
ORIGIN      
        1 gtcaggggct cgccgttctc gttgagtgcg gataatagcc ctgcgagcga gacgctcaag
       61 cctcctcgct gcgccgccgg gtacatggta gcggatggcg caagtcccct tattggtcgg
      121 ccggccctgc gcgcaagcgc ccgctcacgc tacgctggtc tcgatttcgc gctcccttgc
      181 gacgaatccc acgctctgga gggcatacgt gccggaggca acggagcgga ggcgtatttc
      241 gcctgaccgg caccggcacc gccgtaccgc aactggcggg acacgttgcg gatccgccga
      301 tcccaccggt caccaatgtc ccaacccaac agcacgaaat tgggaagcag tggagccgta
      361 aatcgatcgg tcagaagggt tcgcatccct gacgctcgct ttcgccagaa gcgaagattg
      421 cgttcgcgct catctgatgt ccgtttcgcg ccccagtcgg tcatagacgc aagtttcgcc
      481 gttgcctgaa aacggacaac gcgagccttc gcatggccgc ctcctcttat acctgctcaa
      541 tgcggccaag ccgaggaagg cgaagcaacg gacggctatt tgaaacccgg ctgcacagcc
      601 cgtgtgcgcc tgcaccgacc ctccgccaaa ttgattttga tcaaagctgt tcttgcagcg
      661 gacatctcta gtgtcaccca gtgggcttca gccgccgctg ccttagccgc cgctaaggag
      721 cttgcgtgaa gtgtggagga caaaatgctg cgaaggactc tccggcgcta tcgagccatc
      781 gcggcgacca cgtcgcttct gactgttgcc gtccttattt ctggcgggca tttcaacgct
      841 gctcaggcac agaagggccg accggcagcg gtagcttgcg gcaaagagct acagaagcgc
      901 tgcactggcg tcacagtatt tggaaacaac attcttgagt gcctccaaaa ggatcaggaa
      961 aagcttccga agcgatgtgc tgcattggcg aacaatattg ttcgcagttg tgacacggat
     1021 gcgtcgcggc gatgcccggg caacgtcgcg ggccaaggaa atattcttgc atgcctgaca
     1081 accgccaggc gttcggtttc cgcgcgatgc aatgcgtctc tcgatgcagc ttatgtacgt
     1141 cggtgaagac gggattgtcc gcgccacgga gtcgtcctca cctggggggc ccagaccgag
     1201 gcagtaacaa gcaagctcac gaccctgggc ggaatgcttc gtacctttga ggtgacactg
     1261 aaggcgaaga acgcctagag cgcctagctg tggagcctca ataggttgtt ctcgttgagg
     1321 ccgaggcggc tgatgggtgg gcttcctttt aggctgccgt ggggtcggtg ccaattgtag
     1381 gcgtgggtcc acggctgcag ctgtcgttcg cgctctcgcg agctgttgta ggcgcgtgca
     1441 taggcccatt ccctgagcgc ggtctggatg aagcgttcgg ccttgccgtt ggttttcggc
     1501 gtgtagggtc tggtcctgac gtgtttgagc ttgagccttt tgcaggcgcg cgcgaaggcg
     1561 aaggctttgt agcaagagcc gttgtcggtc atgacgcggg cgacggtgat gccaagtctt
     1621 tggtaatagg cgacggcggc cttgaggaag gcgacggcgc tgagtgcctt ctcgttcggc
     1681 atgatcatgg tgaaggcgat gcgcgaggca tcgtcgatgc agacatgcac gaactcccag
     1741 cctgcccctt cgccgcgggc acgtgggcgg ctctgtcctc ggcgatcgcc tgtgatgcga
     1801 tgaccgacct ggtggaagcg tccgagcttc ttgatgtcga tatggatgag ctcgcccggg
     1861 tgctggcgct cgtagcggcg cacgggttcg gcgggatcga gatctttgag gcggctcagg
     1921 ccggcgcgct tgaggatgcg gctgacagtg gctggcgaga cgccgactgt tttggcgatg
     1981 tgctggcccg acagacgttg ccggcgcagc gcgatcaccc gtttgacgat tgcccggctg
     2041 gtctgggagc gcagtctctt cgggcgcgat gagcgatcgg caagtccggc cggcccttcg
     2101 gctgtgaagc gggcgagcca tttgtgggcg gtgtgcgggc agacgcctgc ggcacgtgcg
     2161 gcggcctgcg gcgtctgccc acccaggata gcgcgcacca tctgctctcg accgaacggg
     2221 gtgaggcgtg cattcttgtg aatgttcatc cggttctccc gtggaccgct gaagccttgc
     2281 aactccagct tcctcgatct gaaccggatg aacaacctgc tgaaagctca catctagcag
     2341 agctgcggct ggattttgcg tgcggcatct gcaacagcct cgtgatgaca aagggcacgc
     2401 catgagcttt gggcatgcaa ggggatggat ggcggtcgcg gcgctgacgg ctgtggtcgt
     2461 gctcggctgt tcgccggacg ctgcgatggc gcaggcacga ccgacgccgc ctgctgccac
     2521 gaagccggat gcggcgttcg acagcgcgaa ggtagcgttc gaggcgctcc ccgagaccga
     2581 gcgcaaggcg gtccaggacg cgctcgtctg gacgggcgat ttcaacgcgg cggtgagcgg
     2641 cgaattcggc cggcgcacct tcgacgcgat caatgcctat ctggcgcgca ccaggcggcc
     2701 ggccgccggc acgctcgacg cgccgacgcg caaggcgctg ctggcgagcg cgcaacgcgc
     2761 cagggacgcc cagaagttca cggtgctggg cgatgcccgc acgggggtgc gcatcggcgt
     2821 gccgcaaggc attctcgtca agcacgacgt caatccgaac ggcggcagcc gctggcagag
     2881 cgccgatggc aggatcacgc tcgacacgcg cgccgtcgcg ccggcggaag ccgatctcgc
     2941 ggcgctttac gaacgctcga tcgccacgca gataccgggg cgacaggtca cctacaagct
     3001 gctgcgcccg gattttttcg tcgtctcggg cgagacgccg acgggcaagt tctatcagcg
     3061 ctacgcgcgc gggcctgcag gcgtgcgcgg cttctcgatc ggctacgaca aggcgctggc
     3121 caaggatttc gaccgcgcgg tgatcgccat cgccaacagc tttgcgccgt ttcccgaggc
     3181 cgcggcggtc gccgccgcca cgccgccgcc gcaaccgccg ccggccgccg agccggcgcg
     3241 ccccaagccg ccgctggcga gcgggatcgt ggtcgcggcg gggcggatcg tgaccagcgc
     3301 cacggtcgcg gcctgcaccg agctgcgcgt cgccggcgcc cgggcgcggg tgctcaagag
     3361 tgaccaggcc ataggagtcg cgctgctcga gagcgacgcc gtcgccgcca aggcgccggt
     3421 cgctgtgcgc agcgcccgcg ccgacgcgag cgtgctggtg ctgtcccacg ccgtggatgc
     3481 gggctcccgt cccgggctgg tcgtgacccc cgccgacatc gtcggcggcc ggctcgtcgc
     3541 gccccttcag ccgggcgcca gcggcgctcc ggtggtcgac cgcaccgggg cgctcgtcgg
     3601 catcgtcggg gcgttgcgca gcacgccgaa cgtggtggcc ggcaccgttc cgccgctcgc
     3661 gcatccgttc atcgcggccg agccgatcgc cggcctcctc agcggcagcg gcgtcgccct
     3721 tgcaaatgcg tcggagcagc cgcgccgcag cgccggcgag atcgccgccg ccctcggcgc
     3781 cgccgtcgtg ccggtgacgt gcggggaatg agggatcgat cttcccgctt acgggcgagg
     3841 ctcgggggtg aggaaaaagt cgcgccctca cccggtcgcg ccttcggcgc ggctcgacct
     3901 cccccgcaag cgggagaggt tatcgggatc tgaacttgag cacgcggccg cgcgcctgct
     3961 ccgcctccat cgcggcggtg atcgcctgcg ccagctcttt ctggccgaag ggcttgtcga
     4021 gcctgtgcag ggtgggatcg gcgtcggcgg gcagctcggc gaagccggtc gccaggatga
     4081 tcggcaggtt cggccattcg gccctgatcc gttcggcgag ctggagcccc gtcgtctgcg
     4141 gcatgatctg atcggtgatc acgagatcga catgcttctc gtgctgcagg agggcgagcg
     4201 cctcgcgggc agagctcgct tccagcaccg tgtgtccaag ctcctcgacc aacgcggccg
     4261 tgttgagcag cacgaggttg tcgtcgtcga ccgcgagcac gacgagcggg cgcaccgcgt
     4321 gggggctttc cgccgcgggc ttgtcgtcgg cgccctgctc gccctcaacc tcggccaccg
     4381 ggagccagag ctccgcggtc gtgccctcgc ccttgcggct cttgaggacg aaccgccctc
     4441 ccgactgctc cgtgacgccg tgcaccatcg acaggccgag gcccgttccc ttgccgatgc
     4501 ccttggtcgt gaagaacggc tccatggcgc gcgccagggt gggctcatcc atgccctcgc
     4561 ccgtgtcggt gatggacagg cagacatagt gtccgggcgg cagccgggtg gcgtgcccgg
     4621 tggtgatgct ctcctgccgc gccgcgatga tgatcgtgcc cccgtccggc atcgcatcgc
     4681 gcgcgttcac ggcgaggttc agcagcgcca gctcgagctg gttctcatcg gcgcagacca
     4741 tgttgaggac gagcgggaac cgggtctcga tcctgaccga cgagccgagc gaatgctgca
     4801 ggagctcgga catgccgcgc accagcgccg gcacgtcgac gggctccgtc ttcaatgcct
     4861 ggcgccgggc gaaggcgagc atgcgctgcg tcagcgacgc acctcgctgc gcgccctgca
     4921 tggcattgtc gagcaggcgc agcaccttgg gatcgtccgg cacgcgcttg cgcaacagct
     4981 cgaggctgcc gaggaccgcc gtcagcaggt tgttgaagtc gtgcgcgatg ccgccggtga
     5041 gctgtcccac ggcttccatc ttctgcgact ggaacagcgc ctcgcgcgcc tgctcgaggc
     5101 tgcgctccgc ttccttccgc tcggtgatgt cacgcgtgat cttggcgaag ccgatgagct
     5161 cgccggcctc gtcgcggatc gcgtcgatca cgatgttggc ccagaagcgg gtcccatcct
     5221 tgcggacgcg ccagcccgcc ttctcgaagc ggccctcacg gatggcgatg tcgaggccgc
     5281 gctgaggctc gccgcgcgcc cggtcctcgg ccgcgtagaa gcgcgagaaa tgctcgccga
     5341 cgatctcgtc ggcgcgatag cccttgatcc gctcggcgcc cgagttccag ctggtgatgc
     5401 gcccctgcgg gtcgagcatg tagagggcgt agtcggtcac gccgttgacg agcagcctga
     5461 actgctcctc gctccgcttc agcgcgtcgg cggcgaactt gcgttcggtc aggtcgcgcg
     5521 tgatcttggc aaacccgacc agcctgccgg ccgggtcgcg gatcgcgtcg acgatcacgt
     5581 gcgcccagaa gcgggtgccg tccttgcgga cgcgccagcc ttcgttctcg tacctgccct
     5641 ccgtggcggc ggtttcgagc acgtgcttcg gcagcccggc ctcgcggtcc ccttcggtat
     5701 agaaccggga gaaatgctgg ccgatgattt ccggcgcctc gtagcccttg aagcgctgcg
     5761 cgccggcgtt ccagctcgtc acgatgccgg tcggatcgag catgtagatg gcgtagtcgg
     5821 tgatggcgct gacgaggagc tcgaagcgcc cttcggacgt cgacgacaca ccgggctgct
     5881 ccggatcacc catgaccgct cctttccgcg ggagcgccat aaaccggcac gacgcgccgg
     5941 agcaaccggg cgcgaccgag ggccgccccg cgccagctgg tcatggccgg cgcaggcggg
     6001 ccttcagcgc gtcgcgcgcc ggcctttagg aacttacgcc taccttcgtt cgccaacagg
     6061 atcgctctgc ccgatgcgga agcccactcg ccggcccgtt cccggagcac gttcgccccg
     6121 tcccagccgg ccgagagcca actgggtgga atgccccgcc aagcttaatg gttccatgcg
     6181 ggtgcgcgac ccgacgggat atggtgaacg atcggtagcc acgagctggg gctcgcctca
     6241 ggccgggctt ccaggtccac ctggaacggg gaaggcgcgc cactggttcc atcgtggcag
     6301 cccgagcacc cggcggtgcg gcttgcctcc ggagcatcgg accgggatga gcgacgacac
     6361 gggccgcagc gaagacccga tcctggccca ttggggggac gagggacacc cgccgccatt
     6421 ccgatcgacg ccagcccacc gattttgcgg cgcgtgcgca accgtggccg tgcacggcac
     6481 gttgttgcac gggggaacgc catggagggt ttcatgccat tgcaaacgct gacgacggcg
     6541 atcgccgcgg ctcttctctt cgccacgagt gcggccgcgc agaacattca ggaccgcacc
     6601 atcaaggtcg gcatcggcct caccgccgac catccgcaag gggtcgccgt gaccaagttc
     6661 ggcgagatcg tcgcggcgaa gagcggcggc aagctgaagg tgcggctgtt cgccggcggc
     6721 gccgttggca acgacgtcac catgatctcg gcgctccagg gcgggacgct ggagatgacg
     6781 gtgcccgaca cctcgaccct ggtcggtatc cagggcctca agaatttcgg cctgatcaac
     6841 ctgccgttcc tgttcaacaa gagcgaggag gccgacgcgg tcctcgacgg ccccttcggc
     6901 cagaagctgc tcgcccagct cccggaacgg ggccttgtcg ggctcggctt ctgggagaac
     6961 gggttccgcc acgtcagcaa cagccggcgc ccggtcgcca aggcggaaga cttcgccggc
     7021 ctgaagctgc gggtgatcca gaacccgttg ttcatcgaca cattcgcgtc gctcggcgcc
     7081 tcgccgcagc cgatgccgtt tcccgaggtc tacacggccc tcgagcagcg cgtcgtcgac
     7141 ggtcaggaga acccgctcgc gacgatcctc gcctcgaaat tctacgaggt gcagaaatac
     7201 acggtgctct cgaaccacat ctacagcgtg tgggcgctcc tgatgagcaa gcgcttctgg
     7261 gaccgcctgt cggccgacga gaagaagatc atctccgacg ccgccgccga ggcccaggcg
     7321 ttcgagcgcc agaccatccg ggccttcgac cgcgaggcgc tcgagcagct caagtccaag
     7381 ggcatgcagg tgaccacgct cgaggctgcg gaagtcgcca agctgcgcga caagacgaag
     7441 ggcgtctggg acaagttcac caaggaattc ggcg
//
LOCUS       DATAIQ010000495         3714 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_242843, whole genome shotgun sequence.
ACCESSION   DATAIQ010000495 DATAIQ010000000
VERSION     DATAIQ010000495.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3714)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3714)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3714
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_242843"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(98..262)
                     /locus_tag="VHN20_08230"
     CDS             complement(98..262)
                     /locus_tag="VHN20_08230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725790.1"
                     /translation="MSDNSGSSALLGVILGGVVVVLLVVFLFGGFGNFGGSKSVDVNI
                     KPPVATGSTK"
     gene            404..2113
                     /locus_tag="VHN20_08235"
     CDS             404..2113
                     /locus_tag="VHN20_08235"
                     /EC_number="4.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009208189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IlvD/Edd family dehydratase"
                     /protein_id="HEX2725791.1"
                     /translation="MNETTRRGLATGLTNYGDPDFALYLRRSFARSMGYSTEMLSRPV
                     VGIATSGSGFNNCHRLMPELVEAVKRGVLAAGALPLEFPTVSLGEVFLSPTSLMFRNL
                     MAMDVEEMIRAQPMDAVVLIGGCDKTVPAQLMGAISADRPAIQLVTGPMMTGRLNGER
                     LGACTDCRRFWARYRAGEMDRDAIDTVEGRLSVTAGTCAVMGTASTMASIAEALGMLL
                     PGTAAIPAVHADRLRAAEATGKRAVELIGSGLTPQRIVTPQAVENAMRVLLALSGSTN
                     AVIHLAAIAGRAGIEVPLERLNEFSDTTPVLVDLKPTGEGYMEDFFAAGGLGAVLREL
                     KDLLHLDCMTVTGETLGARLAGEPPYVDRAVVRPKDTPVSEVGGLVALFGNLAPQGAV
                     LKRAAANPALFETEGRAVVFTGLDDLSARIDDPTLEVEPHDILVLQNAGPIGAGMPEA
                     GYLPIPAKLARAGVKDMVRISDARMSGTAFGTIVLHVSPEAAIGGPLALVRTGDRIRL
                     SVRERRLDLLVGDDELARRRAALVLPEGVGTERGYRRIYRDQVLQAEHGCDFRDLVGR
                     GRR"
     gene            2116..3030
                     /locus_tag="VHN20_08240"
     CDS             2116..3030
                     /locus_tag="VHN20_08240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019862057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HEX2725792.1"
                     /translation="MARQDYEVLDDRFAPLINTTARVEKLYEGCRWAEGPAYFPAGRY
                     LVWSDIPNDRMLRFDEATGTVGVFRYPAGYSNGNTVDRRGRLVTCEHGFRRVTRTEHD
                     GRITVIADRYAGKRFNSPNDVVVKSDASVWFTDPTYGIDSDYGGHKAESEIGASNLYR
                     VDPRSGEVRIAAGDFVRPNGLAFSPDESRLYVSDTGASHVPDGPRHIRVFAVGQDGAL
                     SGGEVFATSTAGSFDGFRFDDAGRLWTSAGDGVHCYDPDGTLIGKVLVPEITANVVFG
                     GLKRNRLFICATASLYAVMLAVNGTKTF"
     gene            complement(3294..>3714)
                     /locus_tag="VHN20_08245"
     CDS             complement(3294..>3714)
                     /locus_tag="VHN20_08245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009468031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="M3 family metallopeptidase"
                     /protein_id="HEX2725793.1"
                     /translation="VASALVDMEFHLLQAADALDVAAFEKDTLDKIGMPKAIVMRHRT
                     PHFAHVFSGDGYSAGYYSYMWSEVLDADAFKAFEETGDVFDAATAQRLKTFVYSAGYL
                     REPAEAYRAFRGREPKVEALLEKRGFRAAAMQPSAEV"
BASE COUNT          604 a         1273 c         1253 g          584 t
ORIGIN      
        1 atcctgcgga gtcggaggct ggctgcggaa accagaccgc gactaggaaa gcgagagcgg
       61 gatcgcccca gcccgagacg atcccgctgt cgagtgatta cttcgtgctg ccggtcgcga
      121 cagggggctt gatgttgacg tcgacgctct tcgagccgcc gaagttgccg aacccgccga
      181 acaggaagac gacgagcaac acgaccacga cgccgccaag aatcacgcca agaagggcgc
      241 tgctaccaga gttgtcagac attgggatac tcctacacaa gttatcgcag gttaaaacgt
      301 gaagcgtggc cgtattgttc catcccttta gggccgcttg agcgcggtcc cgtcccgaaa
      361 ggttaatacg gccgaccaat tctgggggag gacgagacag cagatgaacg aaacgacccg
      421 ccgtgggctt gctaccggtc tgaccaatta cggcgacccg gattttgccc tttacttgcg
      481 ccgatctttc gcccgctcga tgggttactc gaccgagatg ctgtcgcgtc ccgtggtcgg
      541 gattgccacc tcgggcagcg gcttcaacaa ctgccaccgc ctgatgccgg aactggtcga
      601 ggcggtgaag cggggcgtgc tcgccgccgg ggcgctgccc ctcgagttcc cgacggtctc
      661 gctcggtgag gtcttcctga gcccgaccag cctgatgttc cgcaacctga tggccatgga
      721 tgtcgaggag atgatccggg cccagccgat ggatgcggtc gtgctgatcg gcggctgcga
      781 caagaccgtt ccggcgcagc tgatgggcgc gatctcggcc gacagacccg ccatccagct
      841 ggtcacgggc ccgatgatga ccggccgcct gaacggcgag cgcctgggcg cctgcaccga
      901 ttgccggcgc ttttgggccc gctatcgcgc cggagagatg gaccgcgatg cgatcgacac
      961 ggtggagggg cgtctgtcgg tgaccgcggg cacctgtgcc gtcatgggca ccgccagcac
     1021 gatggcttcg atcgccgagg cgctcggcat gctgctgccg ggcaccgccg cgatcccggc
     1081 cgtccatgcc gaccggctgc gcgccgccga ggcgaccggt aagcgcgccg tcgagctgat
     1141 cggctcgggt ctcacgccgc agcgcatcgt caccccccag gcggtggaga acgccatgcg
     1201 cgtgctgctg gcgctgagcg gctcgaccaa cgccgtcatc cacctcgccg caatcgccgg
     1261 ccgcgccggc atcgaggtgc ccctcgagcg gctcaacgag ttcagcgaca cgacgccggt
     1321 cctggtcgac ctgaagccca ccggcgaggg ctacatggaa gatttcttcg cggccggggg
     1381 gctcggcgcg gtgctgcggg agctgaagga cctgctccac ctcgactgca tgacggtcac
     1441 cggcgagacg ctcggcgctc gcctcgccgg cgagcccccc tacgtcgacc gcgcggtcgt
     1501 ccgccccaaa gacacgcccg tctcggaggt gggcgggctc gtcgcgctgt tcggcaacct
     1561 ggcgccccag ggggccgtcc tcaagcgcgc cgctgccaat ccggccctgt tcgagaccga
     1621 ggggagggcg gtcgtcttca ccgggctcga cgacctgtcg gcgcgcatcg acgaccccac
     1681 tctcgaggtc gagccgcacg acatcctcgt gctgcagaat gccgggccga tcggcgcggg
     1741 catgccggaa gccggctacc tgccgatccc cgccaagctc gcccgcgccg gcgtcaagga
     1801 catggtgcgc atctccgacg cgcgcatgag cggcacggcc ttcggcacga tcgtgctgca
     1861 cgtctcgccc gaggccgcca tcggcgggcc gctggcgctg gtgcgcacgg gcgaccgcat
     1921 ccgcctcagc gtgcgcgagc gccgcctcga cctcctggtc ggcgacgacg agctggcgcg
     1981 gcggcgcgct gccctggtgc tgccggaggg cgtcgggacc gagcgcggct accggcgcat
     2041 ctaccgcgac caggtgctgc aggcggagca cggctgcgat tttcgcgacc tcgtgggccg
     2101 tggccggaga tgagcatggc gagacaggac tatgaggttc tggacgaccg cttcgcgccg
     2161 ctgatcaaca ccaccgcgcg cgtcgaaaag ctctacgagg gctgccgctg ggcggaaggg
     2221 ccggcctatt ttccggccgg ccgttacctc gtgtggagcg acatccccaa tgaccgcatg
     2281 ctgcgcttcg acgaggccac gggcacggtc ggcgtgtttc gctatccggc gggctattcc
     2341 aacggcaaca cggtggatcg ccgcggccgc ctcgtcacct gcgagcacgg cttccgccgc
     2401 gtgacccgca ccgagcacga cgggcgcatc acggtgatcg ccgaccgcta cgcgggcaaa
     2461 cgcttcaaca gccccaacga cgtggtggtg aagtccgacg cctcggtgtg gttcaccgat
     2521 cccacctacg gcatcgactc ggattacgga ggtcacaagg cagaaagcga gatcggcgcc
     2581 tcgaacctct accgcgtcga tccccgctcg ggcgaggtcc gcatcgcggc gggcgatttc
     2641 gtgcgtccga acggcctcgc cttctcgccg gacgagagcc ggctttacgt gtccgatacg
     2701 ggcgccagcc acgtgccgga cgggccgcgt catatccgcg tcttcgcggt cgggcaggac
     2761 ggcgcgctgt ccggcggcga ggtcttcgcc acctccacgg ccggcagttt cgacggcttc
     2821 cgcttcgacg atgccggccg gctctggacc agcgccggcg acggcgtgca ctgctacgac
     2881 ccggacggca cgctgatcgg caaggtgctg gtgccggaga tcaccgccaa cgtcgtgttc
     2941 ggcggcctga agcgcaaccg cctgttcatc tgcgcgacgg cctcgctcta cgcggtgatg
     3001 ctcgccgtca acggcaccaa gacgttctga cggccccaca tcgtcatcgc cgggctcgct
     3061 gaccctttag agcatgatcc ggcgaagagg acaccgcttc gccgaaaaag atcttgcgac
     3121 acaatgagat ttagagcggg atcgattcaa tctgaattga tcccgctcta atgcccggac
     3181 agcgtggagc gctgatccgg gtacggcgat cccatggcga ccgatgtgct gagcacgagc
     3241 caccatggat ggccggaaca ggcccggcct gacaattccg tggaggagcg ccgctacact
     3301 tccgcgctcg gctgcatggc ggcggcacgg aagccgcgct tctcgagcag cgcctcgacc
     3361 ttcggctcgc ggccgcggaa ggcgcggtag gcctctgccg gctcgcgcag gtagccggcc
     3421 gagtagacga acgtcttgag gcgctgcgcc gtggcggcgt cgaacacgtc gccggtctcc
     3481 tcgaacgcct tgaaggcgtc cgcgtcgagc acctccgacc acatgtagct gtaatagccg
     3541 gcggaatagc cgtcgccgga gaacacgtgc gcgaagtgcg gcgtgcggtg acgcatgacg
     3601 atcgccttgg gcatgccgat cttgtcgagc gtgtccttct cgaacgcggc tacgtcgagc
     3661 gcgtccgcgg cctggagaag atgaaactcc atgtcgacca gcgccgaggc gacg
//
LOCUS       DATAIQ010000496         3135 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_118971, whole genome shotgun sequence.
ACCESSION   DATAIQ010000496 DATAIQ010000000
VERSION     DATAIQ010000496.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3135)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3135)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3135
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_118971"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            147..1355
                     /locus_tag="VHN20_08250"
     CDS             147..1355
                     /locus_tag="VHN20_08250"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX2725794.1"
                     /translation="MIRRAILILVACVLAAAAAYYWYVRHQAPSAATAQAPAAAPPPA
                     EVGVIETRAAEVPLTLVYAGRVAGFRDVEIRPQVSGVLLKREFSEGAQVKQGQVLFRI
                     DPRTYEVALARGQAQQAQAQASLRQAEENYKRIDELFKKGVATDKQLDDVRAAREQAQ
                     AAIQLAQADIRAAQLNLGYTTVTAPVTGITSLNSPAEGTLILAQQTVLTTISQLDPAY
                     VNFSVTDAEYQSFRQLNERLAKPIREEDLKVQVLFSDGTAYGEQGSVDVSARAIDPRT
                     GTLQVRAVLPNRAGTLLPGQFVRVTIRGIVLPDAIVIPKQAVSQGPEGPFVYVVGESN
                     AAQPRPVRLGREVEAGWVVQEGLKPGERVVVDGIIRVRPGAPVRPVPMAAASASGASA
                     AATGSAGARP"
     gene            1355..>3135
                     /locus_tag="VHN20_08255"
     CDS             1355..>3135
                     /locus_tag="VHN20_08255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019443626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX2725795.1"
                     /translation="MSKFFIDRPVFASVLSIVIVLAGLMAMRALPIAQYPQIVPPEVV
                     ITATYPGATAQTIAETVAAPLEQQINGVESMIYMRSTSTGSGTLNLTVTFQIGTDPDQ
                     ATINVNNRVQRASALLPEEVRRQGVTVNKRSSSILQVLTMSSPGGRYDTIFISNYALI
                     NVLDELRRTPGVGDATLFGASDYSMRIWLKPDKVAQYNLTPSDIAAAIREQNAQFAAG
                     RFGDEPTPGAQAFTYSVTTQGRFADPREFESIILRSDENGAALRLRDVARVELGALNY
                     SLVATFNGAPAVPIGIFLQPGANALEVAGTVKATMDRLSQRFPDGLRYDIPFNTTRFV
                     EASIEEVVTTFVEAIVLVVLVVFLFLQSVRATLIPVVAVPVSIIGTFAGMYLLGFSIN
                     LLTLFGMVLAIGIVVDDAIVVLENVERIMTTEGKGPREAAIQAMNEVSGPVIAIVLVL
                     CAVFVPVSFLGGLAGELYRQFAVTIAVSVVISGIVALTLTPALCALILTRSHGRPLLP
                     FRLFNRGFEWMTDRFTGGVQFFLRHALIALVLVAAMLGATWYLFQRVPGGLVPQEDQG
                     YVFLVTALPPAASLDRTRAVTDRVNQAV"
BASE COUNT          491 a         1087 c         1023 g          534 t
ORIGIN      
        1 accgtgacgc gcccgtcacg agatcgtgcg gcacgcctgg cgatgctatt tcgcttaccc
       61 ccgcgttgcg ggacgggtgg acgagtccgg gcttgtggcg cctgcgccgg catccctggc
      121 gacgttttcg tgaacaggac aaaaccgtga tcaggcgagc catcctcatt cttgtcgcat
      181 gcgtccttgc ggccgcggct gcgtattact ggtacgtgcg ccaccaggca ccgtcggccg
      241 cgacggcgca ggcaccagcc gcggcgccgc cgccggccga ggtcggggta atcgagacac
      301 gcgccgccga ggttccgctc acgctcgtct atgccggccg cgtcgccggc tttcgggacg
      361 tcgagatccg gccgcaggtc agcggcgtcc ttctcaagcg cgagttcagc gaaggcgcgc
      421 aggtcaagca ggggcaggtg ctgttccgca tcgatccgcg cacctatgag gtcgcgctgg
      481 cgcgtgggca ggcgcagcaa gcccaggccc aggcgagcct gcggcaggcc gaggagaatt
      541 acaaacgcat cgatgagctc ttcaagaaag gcgtcgcgac cgacaagcag ctcgacgacg
      601 tgcgcgccgc gcgcgagcag gcccaggccg cgatccagct tgcccaggcc gacatccgcg
      661 cggcccagct gaacctcggc tacacgacgg tcacggcgcc ggtcaccggc atcacaagcc
      721 tcaattcgcc ggccgagggc accctgatcc tggcgcagca gaccgtgctc accacgatct
      781 cccagctcga tcctgcctac gtcaatttct cggtcaccga cgccgaatac cagtcgttca
      841 ggcagctcaa cgagcggctg gcgaagccga tcagggagga ggatctcaag gtccaggtgc
      901 tgttcagcga cggcaccgca tatggtgagc aaggcagcgt cgacgtgtcg gcgcgcgcga
      961 tcgatccgcg caccggaacg cttcaggtca gggcggttct gcccaaccgg gccggcacct
     1021 tgctgccagg acaatttgtg cgcgtcacca tccgcggcat cgtgcttccc gacgcgatcg
     1081 tcattccgaa gcaggccgtc tcgcaaggtc ccgaggggcc gttcgtctat gtggtcggcg
     1141 agagcaatgc cgcgcagccg cgtcccgtgc gcctcggccg cgaggtcgaa gcgggctggg
     1201 tcgtccagga ggggctgaaa ccgggcgagc gcgtcgtcgt tgacggcatc atccgcgtgc
     1261 ggcccggcgc gcccgtgcgg ccggtgccca tggcggccgc aagcgcaagc ggcgcaagcg
     1321 cagctgccac cggatccgca ggagcccggc cgtgatctcg aaatttttca tcgaccggcc
     1381 tgtcttcgcg tcggtcctat cgatcgtcat cgttcttgcc ggcctgatgg cgatgcgggc
     1441 cctgccgatc gcgcaatatc cgcagatcgt gccgcccgag gtggtcatca ccgcgaccta
     1501 tccgggcgcc accgcgcaga ccatcgccga gaccgtggcg gcgccgctcg agcagcagat
     1561 caacggtgtc gagagcatga tctacatgcg ctcgacctcg accggttccg gcacgctcaa
     1621 cctgaccgtg acgttccaga tcggcaccga cccggaccag gcgacgatca acgtcaacaa
     1681 ccgcgtgcag cgcgcgagcg cgcttctgcc cgaggaggtg cgccggcagg gggtgacggt
     1741 caacaagcgt tcgagctcga tcctgcaggt gctgacgatg tcgtcgccgg gcgggcgcta
     1801 cgatacgatc ttcatctcca actatgcgct catcaacgtt ctcgacgagc tgcggcggac
     1861 gccgggcgtc ggcgacgcga cgctgttcgg cgcctcggat tactcgatgc gcatctggct
     1921 caagccggac aaggtcgcgc aatacaacct gacgccgagc gacatcgccg ccgccattcg
     1981 cgagcagaac gcccagttcg cggccggccg gttcggcgac gaaccgacgc cgggcgcgca
     2041 ggccttcacc tactcggtaa ccacgcaggg ccgcttcgcc gacccgcgcg agttcgagag
     2101 catcatcctg cgctccgacg agaacggcgc cgcgcttcgt ctcagggacg tggcgcgcgt
     2161 cgagctcggg gccctgaact acagcctcgt cgccaccttc aacggcgcgc cggcggtgcc
     2221 gatcggcatc ttcctgcaac ccggcgccaa tgcgctcgag gtggcgggca ccgtgaaggc
     2281 gaccatggac cgcctgtcgc agcgatttcc cgacgggctc agatacgaca ttccgttcaa
     2341 cacgacgcgt ttcgtcgaag cctcgatcga ggaagtggtc acgaccttcg tcgaggccat
     2401 cgtgctggtc gtcctggtcg tattcctgtt cctgcagagc gtgcgcgcga cgctgatccc
     2461 ggtggttgcg gttccggttt cgatcatcgg caccttcgcc ggcatgtatc tgctcggctt
     2521 ctcgatcaat ctgctcaccc tgttcggcat ggtgctggcg atcggcattg ttgtcgacga
     2581 cgccatcgtc gtcctcgaaa atgtcgagcg catcatgacg acggaaggca agggcccgcg
     2641 cgaagcggcg atccaggcga tgaacgaggt gagcggcccg gtcatcgcca tcgtgctcgt
     2701 actctgcgcc gtgttcgtcc cggtgtcgtt cctgggcggg ctcgccggcg agctctatcg
     2761 tcagttcgcc gtcaccatcg ccgtgtccgt cgtgatctcc ggcatcgtcg cgctcacgct
     2821 gacccccgcg ctttgcgccc tgatcctgac gcgcagccac ggccgtccgc tgctcccgtt
     2881 ccggctcttc aatcgcggct tcgagtggat gaccgaccgc ttcacgggcg gcgtgcagtt
     2941 tttcctgcga cacgcgctga tcgccctcgt tctggttgcg gccatgctcg gagcgacctg
     3001 gtacctgttc cagcgcgtgc cgggcgggct cgttccgcag gaggaccagg gctacgtctt
     3061 tctcgtgacg gcgctgccgc ctgcggcgtc cctcgaccgc acgcgcgcgg tgacggaccg
     3121 cgtgaaccag gcggt
//
LOCUS       DATAIQ010000497         3707 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_119055, whole genome shotgun sequence.
ACCESSION   DATAIQ010000497 DATAIQ010000000
VERSION     DATAIQ010000497.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3707)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3707)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3707
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_119055"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..378)
                     /locus_tag="VHN20_08260"
     CDS             complement(<1..378)
                     /locus_tag="VHN20_08260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725796.1"
                     /translation="MNVHQKAAAWEPPAHIARETIVACSDAILARPDIPLKKTEDVFR
                     IESVGLEWDMGVTVYEPADPAQVARGADGRKIGIFLLHGGSGDFKSMEPMAKTYAGKF
                     GHKAVAMTFPGRLYFDDPSRDWPG"
     gene            complement(417..1151)
                     /locus_tag="VHN20_08265"
     CDS             complement(417..1151)
                     /locus_tag="VHN20_08265"
                     /inference="COORDINATES: protein motif:HMM:NF036686.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725797.1"
                     /translation="MSFTSWRGVVGCIKPTLRTGSLEELIRILPEGIGVLPLFLEISE
                     GTTDEFKRAVAPFEPLVAKLAKAGCDLIHPEGAPPFMLLGYHGEAKVLKQWEETYKVP
                     LFTSGTNHVRALKALGAKKFVGATYFTGAINDVFSKYFVEAGFDVLGMEGMAVDSFKN
                     IGQLAPTQVYAHIKKAFLKHRDAEAIYLLGSGWRVLPVIDMLEQDLGVPVIHPVPARC
                     WEIQHRLSIRQPVKGYGRLLAEMIPG"
     gene            1263..2015
                     /locus_tag="VHN20_08270"
     CDS             1263..2015
                     /locus_tag="VHN20_08270"
                     /inference="COORDINATES: protein motif:HMM:NF036686.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725798.1"
                     /translation="MTYQPILPRARLGFIIPSSNRMVEPQAQRFMPAGVVPHFTRIGM
                     TNKYKAPLDQLLPRILEATSLLADSKCDVTVLQCTGTSMSGGVEMEQHVIDEMQRVSG
                     RPALSAASSLTAAFRALGARRLVFVSETAQEGHDKKVRFLREAGYEIVADKAVGLAGT
                     DAYCTMPPQLWFDVTASLQRDDADAYFISCANIHSIDVIEDLEQRLGKPVVTSNQAAI
                     WCALRTAGLADDMPRLGRLMRLALAPRAVAAE"
     gene            2092..2814
                     /locus_tag="VHN20_08275"
     CDS             2092..2814
                     /locus_tag="VHN20_08275"
                     /inference="COORDINATES: protein motif:HMM:NF036686.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725799.1"
                     /translation="MYGHRARIGYTVAAVTTAVFPIDFYKIVPDGVSLMMVMLPLGER
                     SPDDVKKCYDISIEAAHTMAEAGADLVLLGGLPINLSKGSGRLDDLLRDLEQKIGVPV
                     TSSTTAQQKAYKALGARKVGTVHPFKPDQNARHERYLAEHFGLEPAGVHAGGWDLKTL
                     GKIPIDCALEWGRALKKEHPEIDTFNFACPHWRVVDAIEPLEQELKVNVMTSLQAIAW
                     EAMRRAGVDDRVEGYGRLLREH"
     gene            complement(2817..>3707)
                     /locus_tag="VHN20_08280"
     CDS             complement(2817..>3707)
                     /locus_tag="VHN20_08280"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEX2725800.1"
                     /translation="AGGGYDTYARVLAQHLEQHIPGAPSIINQNMPGASGMLATNWAA
                     SVAPKDGTVIVSTYNALLLEPLFGNPAVKYDTRELEWVGSMGKQQQICVTWHTSPIKT
                     IDQAKQREVVVAATGATGNSATMPKQLNAMLGTRFKVVTGYSTSESRLAVERGEAEGI
                     CGLSYSTLKASNPDWINNKRINVLVQTGTKAQAGLPDVPLLVDLVPNPDDRKVLEILA
                     FPEEMGRPFFMPPGTPKPLVAIVRRAFDATVKDPAFLADGEKSRLELDPVSGEEMEQM
                     IGRAFATPKPLVQRAMELSK"
BASE COUNT          608 a         1235 c         1227 g          637 t
ORIGIN      
        1 gcccggccag tcccggcttg gatcgtcaaa atagagtcgg cccgggaagg tcatggcgac
       61 cgccttgtgc ccgaacttgc cggcataggt tttggccatc ggctccatcg acttgaagtc
      121 gcccgaaccg ccgtgcagca ggaaaatgcc gatcttcctg ccgtcggcgc cgcgcgcgac
      181 ctgggccgga tcggccggct cgtagaccgt cacgcccatg tcccattcga ggccgaccga
      241 ctcgatgcgg aagacgtcct cggtcttctt cagcgggatg tcgggccggg ccaggatggc
      301 atccgagcac gcgacgatcg tctcgcgcgc aatgtgcgcc ggcggctccc aggccgcggc
      361 tttctgatgg acgttcacga gttcctccgc ggatgacgat gtttccgggg gtcgagtcag
      421 cccgggatca tctcggcgag cagccggccg tagcccttga ccggctggcg gatcgacagg
      481 cggtgctgga tctcccagca gcgcgccggc accgggtgga tcaccgggac gccgagatcc
      541 tgctcgagca tgtcgatgac cggaagcacg cgccagcccg agccgagcag gtagatcgcc
      601 tcggcgtcgc gatgcttgag gaaggccttc ttgatatgcg cgtagacctg tgtcggcgcg
      661 agttggccga tattcttgaa ggagtcgacg gccatgcctt ccatgccgag cacgtcgaat
      721 ccggcctcga cgaaatactt gctgaacacg tcgttgatgg cgccggtgaa ataggtggcg
      781 ccgacgaatt ttttggcgcc caacgccttg agggcgcgca cgtggttggt gcccgacgtg
      841 aacagcggca ccttgtaggt ctcctcccac tgcttcagga ccttcgcctc gccgtgatag
      901 ccgagcagca tgaagggcgg cgcgccttcg ggatggatca ggtcgcagcc ggccttggcg
      961 agcttggcga ccagcggctc gaacggcgcc acggcgcgct tgaactcgtc ggtcgtgccc
     1021 tcgctgatct cgaggaacag cggcagcacg ccgatgccct ccggcaggat gcggatcagc
     1081 tcttcgagcg accccgtccg caaggtcggc ttgatgcacc cgacgacgcc gcgccagctt
     1141 gtgaacgaca tatctgctcc taaggtgttg tctccctgct cctgccttac ggcccattcg
     1201 ggctggtgtg aagagcgccg agccggtacg atgcccggac cttcaacccg acgcagccga
     1261 agatgaccta ccagcccatc ctgccgcgag cccgcctcgg cttcatcatc ccgtcctcca
     1321 accgcatggt ggaaccgcag gcgcaacgct tcatgccggc cggcgtcgtc ccgcatttca
     1381 cccgcatcgg catgaccaac aaatacaagg cgccgctcga ccagctcctg ccgcgcatcc
     1441 tcgaggcgac cagcctgctt gccgattcga aatgcgacgt gacggtgctg caatgcacgg
     1501 gcacgtcgat gtcgggcggc gtcgagatgg aacagcatgt gatcgacgag atgcagcggg
     1561 tcagcggccg cccggccctg agcgccgcct cgtccttgac cgcggcgttc cgggccctcg
     1621 gcgcgcgccg gctggtcttc gtctcagaga ccgcgcagga gggacacgac aagaaggtgc
     1681 gcttcctgcg cgaggccggc tacgagatcg tcgccgacaa ggccgtcggc ctcgccggca
     1741 cggacgcgta ttgcacgatg ccgccgcaat tgtggttcga cgtgaccgcg tcgctgcagc
     1801 gcgacgacgc cgacgcctat ttcatcagct gcgccaacat ccacagcatc gacgtgatcg
     1861 aggatctcga gcagcggctc ggcaagccgg tcgtgacgag caaccaggcg gcgatctggt
     1921 gcgctctgcg aacggccggc ctcgccgacg acatgccccg gctcggccgc ctcatgcgcc
     1981 tcgctcttgc gccgcgcgcg gtcgccgcgg agtaggaggc gaatggcgga gactccgtcg
     2041 ctctccattt gctagtcgct attcgccatt cacccacttg agaggacctg aatgtacggg
     2101 catcgcgcac gcatcggcta cacggtcgcc gcagtcacga ccgcagtctt tccgatcgac
     2161 ttctacaaga tcgttccgga cggcgtgtcc ctgatgatgg tgatgctgcc gctcggcgag
     2221 cgcagccccg acgacgtcaa gaaatgctac gacatcagca tcgaggcggc gcacacgatg
     2281 gccgaggccg gtgccgacct ggtcctgctc ggcgggctgc cgatcaacct gtcgaagggc
     2341 agcggccggc tcgacgatct gctgcgcgat ctggagcaga agatcggcgt cccggtcacg
     2401 agcagcacga cggcgcagca gaaggcgtac aaggcgctcg gggcgcgcaa ggtcggaacc
     2461 gtgcatccgt tcaagccgga ccagaacgcc cgtcatgagc gctatctcgc cgagcatttc
     2521 gggctcgagc cggccggcgt ccatgccggc ggctgggacc tcaagacgct cggcaagatc
     2581 ccgatcgact gcgcgctcga atggggccgc gccctcaaga aagagcatcc ggagatcgac
     2641 acgttcaact tcgcctgccc gcactggcgc gtggtcgacg ccatcgagcc actcgagcag
     2701 gagctcaagg tcaacgtgat gacctcgctg caggcgatcg cctgggaggc gatgcgccgc
     2761 gccggggtcg acgaccgcgt cgagggctac ggccggctgc tgcgcgagca ctgacgttac
     2821 ttgctgagct ccatggcccg ctgaaccagg ggcttcgggg tcgcgaaggc gcggccgatc
     2881 atctgctcca tctcttcgcc gctgaccggg tcgagctcga ggcggctctt ctccccgtcg
     2941 gcgaggaagg ccggatcctt cacggtcgcg tcgaaggcgc ggcgcacgat ggcgacgagc
     3001 ggcttgggcg tgcccggcgg catgaagaac ggccggccca tctcctcggg gaaggcgagg
     3061 atctcgagga ccttgcggtc gtcgggattg gggacgagat cgaccagcag cggcacgtcg
     3121 ggcagtcccg cttgcgcctt cgtgcccgtc tgcacgagaa cgttgatgcg cttgttgttg
     3181 atccagtccg gattggacgc cttcaacgtc gaatacgaca ggccgcaaat gccttccgcc
     3241 tcgccgcgct cgaccgcgag ccgggactcg gaggtcgagt agccggtcac gaccttgaac
     3301 ctggtgccga gcatcgcatt gagctgcttc ggcatggtcg ccgagttgcc ggttgcgccg
     3361 gtggcggcga cgacgacctc gcgctgcttg gcctggtcga tggtcttgat cgggctcgta
     3421 tgccaggtga cgcagatctg ctgctgcttg cccatgctgc cgacccattc gagctcacgc
     3481 gtgtcgtatt tgacggcggg gttgccgaac agcggctcga gcagcagcgc gttgtaggtc
     3541 gacacgatca ccgtgccgtc cttgggcgcg acgctcgcgg cccagttggt cgccagcatg
     3601 ccgctcgccc ccggcatgtt ctggttgatg atcgagggag cgcccggaat gtgctgttcg
     3661 agatgctgcg ccagcacccg cgcataggtg tcgtatccgc cgcctgc
//
LOCUS       DATAIQ010000498         2527 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_441300, whole genome shotgun sequence.
ACCESSION   DATAIQ010000498 DATAIQ010000000
VERSION     DATAIQ010000498.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2527)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2527)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2527
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_441300"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1833
                     /gene="ppdK"
                     /locus_tag="VHN20_08285"
     CDS             <1..1833
                     /gene="ppdK"
                     /locus_tag="VHN20_08285"
                     /EC_number="2.7.9.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015929475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050242 - pyruvate, phosphate dikinase
                     activity [Evidence IEA];
                     GO_process: GO:0015976 - carbon utilization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate, phosphate dikinase"
                     /protein_id="HEX2725801.1"
                     /translation="QGEDVVAGIRTPQDITERARQASGSDKPSMEKAMPEAYAELVRI
                     YGILEKHYRDMQDMEFTVERGKLWMLQTRNGKRTTKAALRIAVDLASEGLISKDEAIG
                     RVDPAGLDQLLHPTIDPKAERKVLASGLPASPGAASGEIVFNSDDAEAAKKNGRKVIL
                     VRVETSPEDIHGMHAAEGILTTRGGMTSHAAVVARGMGKPCVSGAGSIRVDYNAGTMT
                     AGGAVLKKGDVITIDGSTGQVLHGRVKMVEPELSGEFATLMGWADAARRLKVRANADT
                     PLDARTARNFGAEGIGLCRTEHMFFEGDRIVAVREMILADDEQGRRAALQKLLPMQRA
                     DFVELFTIMSGLPVTIRLLDPPLHEFLPHTEAEIAEVARTTGVSAEKLKRRAAELHEF
                     NPMLGFRGCRLAVAYPEIAEMQARAIFEAAVEAGAKTGKPAEPEIMVPLIVTKAEFDL
                     VKEHIDAMAEAVMQETGAKLDYQVGTMIELPRACLKADEIAETAEFFSFGTNDLTQTT
                     YGLSRDDAGRFLPGYMERGIFPDDPFQVLDQAGVGKLIKVAVAAGRSVRPQLKVGICG
                     EHGGEPRSVKFCHAIGLDYVSCSPYRVPIARLAAAHAALETSVG"
     gene            1805..>2527
                     /locus_tag="VHN20_08290"
     CDS             1805..>2527
                     /locus_tag="VHN20_08290"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEX2725802.1"
                     /translation="MPLLKPASGSAALTRRPALPNLPTLPEDHDERTLRIALVTEYYY
                     PHLGGVCEHVHFFAREARRRGHRVDIITSNLPGAEPQPHVIRLGRSQPVYCNGSQARI
                     TVGMGLRKELRTVLREGRYDVVHVHSPLTPVLPLLAIEEADCPVVGTFHTYFDSSVAY
                     TVGRRYFQRRLDMLQTAIAVSHSTTVALERYFDADWKIIPNGIDTDVFNPHVPAPPGF
                     PKDVPTILFLGRFDPRNGLSTLI"
BASE COUNT          424 a          898 c          839 g          366 t
ORIGIN      
        1 cagggcgagg acgtggtcgc cggcatccgc acgccgcagg acatcaccga gcgcgcgcgg
       61 caggcgtcgg gctccgacaa gccgtcgatg gagaaggcga tgccggaggc gtatgccgag
      121 ctcgtccgca tctacggcat cctcgagaag cactaccgcg acatgcagga catggagttc
      181 accgtcgagc gcggcaagct ctggatgctg cagacgcgca acggcaagcg caccaccaag
      241 gcggccctgc gcatcgccgt cgatctggcc agcgagggcc tgatctcgaa ggacgaggcg
      301 atcgggcgcg tcgatccggc cgggctcgac cagctgctgc atccgaccat cgatccgaaa
      361 gccgagcgca aggtgctggc cagcggcctg cccgcctcgc ctggcgcggc ctcgggcgag
      421 atcgtgttca attccgacga cgccgaggcc gccaagaaga acggccgcaa ggtcatcctg
      481 gtgcgcgtcg agacgtcgcc cgaggacatc cacggcatgc atgccgcgga aggcattctg
      541 acgacgcgcg gcggcatgac ctcgcatgcg gcggttgtcg cacgcggcat gggcaagccg
      601 tgcgtctccg gggcgggctc gatccgcgtc gactacaatg ccgggaccat gacggccggg
      661 ggcgccgtcc tgaagaaggg cgacgtgatc accatcgacg gctccacggg ccaggtcctg
      721 cacggccgcg tcaagatggt cgagccggag ctgtcgggcg agttcgccac gctgatgggc
      781 tgggccgacg ccgcgcgccg gctcaaggtg cgcgccaatg cggacacgcc gctcgacgcc
      841 aggacggcgc gcaatttcgg agcggaaggc atcggtctgt gccgcaccga gcacatgttc
      901 ttcgaaggcg accgcatcgt cgcggtgcgc gagatgatcc tggccgacga cgagcagggc
      961 cgccgtgccg ccctgcaaaa gcttctgccg atgcagcgcg ccgacttcgt cgagttgttc
     1021 acgatcatga gcggcctgcc ggtgacgatc cgcctgctcg atccgcccct gcacgagttc
     1081 ctgccgcaca cggaggcgga gatcgccgag gtggcccgca ccaccggcgt cagcgcggag
     1141 aagctgaagc ggcgcgcggc ggagctgcac gagttcaacc ccatgctcgg cttccgcggc
     1201 tgccgcctcg ccgtcgccta tccggagatc gccgagatgc aggcgcgcgc catcttcgag
     1261 gcggcggtcg aagccggcgc caagaccggc aagccggccg agccggagat catggtgccg
     1321 ctgatcgtca ccaaggccga gttcgacctc gtcaaggaac atatcgacgc catggccgag
     1381 gcggtcatgc aggagacggg cgccaagctc gactaccagg tcggcaccat gatcgagctg
     1441 ccgcgcgcct gcctgaaggc cgacgagatc gcagagacgg ccgagttctt ctccttcggg
     1501 acgaacgacc tcacccagac cacctacggg ctgagccgcg acgacgccgg ccggttcctg
     1561 ccgggctaca tggagcgcgg catctttccg gacgacccct tccaagtcct tgaccaagcg
     1621 ggggttggca agcttattaa ggttgccgtt gccgcaggac gaagcgtgcg cccgcagctc
     1681 aaggtcggca tttgcgggga gcacggtggt gagcccagga gcgtgaagtt ctgtcacgcg
     1741 atcgggctcg attacgtctc gtgctctccc taccgggtgc cgatcgcccg cctagccgct
     1801 gcgcatgccg ctcttgaaac cagcgtcggg tagcgccgcg ttgacgcgac gcccggcgct
     1861 ccccaacctc ccgaccctgc ccgaggacca cgacgagcgc acgctgcgca tcgccctggt
     1921 caccgagtac tactatccgc acctgggcgg agtctgcgag cacgtccact tcttcgcccg
     1981 cgaggcccgg cggcgcgggc accgggtgga catcatcacg tcgaacctcc cgggcgccga
     2041 gccgcagcca catgtcatcc ggctggggcg cagccagccg gtctactgta acggctccca
     2101 ggcgcggatc accgtgggca tggggctccg caaggagctg cggacggtcc tgcgggaggg
     2161 gcggtacgac gtcgtccacg tccactcgcc gctcaccccg gtcctccccc tcctcgccat
     2221 cgaggaggcc gactgcccgg tcgtcggcac cttccacacg tatttcgaca gctcggtcgc
     2281 ctatacggtg gggcgccggt acttccagcg ccggctcgac atgctgcaga cggcgatcgc
     2341 cgtgtcgcac tccacgaccg tggccctcga gcgctacttc gacgccgact ggaagatcat
     2401 ccccaacggg atcgacaccg acgtcttcaa cccgcacgtc ccagccccgc cgggcttccc
     2461 caaggacgtg ccgacgatcc tcttcctcgg ccgcttcgac ccccgcaacg ggctatcgac
     2521 gctgatc
//
LOCUS       DATAIQ010000499         1841 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_119204, whole genome shotgun sequence.
ACCESSION   DATAIQ010000499 DATAIQ010000000
VERSION     DATAIQ010000499.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1841)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1841)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1841
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_119204"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..231)
                     /locus_tag="VHN20_08295"
     CDS             complement(<1..231)
                     /locus_tag="VHN20_08295"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003583963.1"
                     /note="catalyzes the formation of N-carbamoyl-L-aspartate
                     from (S)-dihydroorotate in pyrimidine biosynthesis;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HEX2725803.1"
                     /translation="MRTITIRRPDDWHVHFRDGAMLRAVAPFTARVFARAIIMPNLTP
                     PVTTAAMADDYRRRIMRVIPAGLKFTPLMTCYL"
     gene            complement(309..551)
                     /locus_tag="VHN20_08300"
     CDS             complement(309..551)
                     /locus_tag="VHN20_08300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725804.1"
                     /translation="MPRYFFHLRCHGKDVRDDAGADFGDPDHAWEAARAVAEELMRSE
                     AAADVNWLTCLFEVTDDGGEVVFELPFAELIGPNPN"
     gene            complement(646..>1841)
                     /locus_tag="VHN20_08305"
     CDS             complement(646..>1841)
                     /locus_tag="VHN20_08305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019905114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ComEC/Rec2 family competence protein"
                     /protein_id="HEX2725805.1"
                     /translation="VMTLVMLGAILVDRPALTMRNLALSALIVLGREPEALLGPSFQM
                     SYAAVAALIASAEWARGRFPAPEPGGYVHRVVRWAIVAGVALLATTLVATLATAPFGS
                     YHFHTINPFGLIGNALAVPLVSIVVMPCAVVAMLAFPFGLDRPVWELMGFAVAKVLGV
                     SQWVSEFTGSTVVVPAFAVEALALMALALIIFTILVSPLRLAALIPAAAGLGLAATPT
                     RFDVYVDRDGAGAAVRASTRQLVLIGRTPAFVVEQWLKADGDGRKPDDATLRAGARCD
                     ALGCTAALGDGRVVALVIDRRAFAEDCRRATLVISRLPAPPTCKPPLLLDRRFLDMHG
                     ATALRFTAAGHDIVTTRAAGDTRPWLRRAAPVRAAQARTPEPSEAPGPAPDPNTESLE
                     PPLYQ"
BASE COUNT          323 a          635 c          646 g          237 t
ORIGIN      
        1 cagatagcag gtcatcagcg gcgtgaattt caagcctgcg ggaatgacgc gcatgatgcg
       61 ccgccggtag tcgtcggcca tggcggccgt ggtcaccggc ggcgtcaggt tgggcatgat
      121 gatcgcgcga gcgaagacgc gcgcggtgaa aggcgccaca gcccgcagca tggcgccgtc
      181 gcggaaatgg acgtgccaat cgtcgggacg gcggatggtg atcgtgcgca tccgcctcct
      241 gtaacggccc gtcccggagg acgccagcct ctcgcgcacg cgagggacgg cgtgctcccg
      301 attcgagctc agttcgggtt tggcccgatg agttcagcga acggaagctc gaacacgacc
      361 tcgcccccgt cgtcggtcac ctcgaacagg catgtaagcc agttgacgtc ggcagccgcc
      421 tcggagcgca tcaactcctc cgcgaccgcg cgcgccgctt cccaggcgtg atcggggtcg
      481 ccaaagtccg ctccggcatc gtcccggacg tccttgccat gacaacgcag gtggaaaaaa
      541 tagcggggca tcacggcgcc tgctgcatct gacgcgtcgg ggtttgagga cgcaacatcg
      601 cgatccgcag tcggtaatgc aacagatcac cgcaggcatg ggccgctact ggtagagcgg
      661 cggctcgaga ctttccgtgt tcggatcagg cgccggtcct ggcgcttcgc tcggctccgg
      721 cgttcgcgcc tgggccgccc gtacgggcgc cgcacgccgc agccacggcc gcgtgtcgcc
      781 tgccgcccgg gtcgtgacaa tgtcgtggcc tgcggccgtg aagcgcagcg cggtagcgcc
      841 gtgcatgtca aggaagcgcc ggtcgagcag tagcggcggc ttgcatgtcg gcggggccgg
      901 caggcgcgag atgacgagcg tggcgcggcg gcaatcctcg gcgaaggcgc gacggtcgat
      961 gaccagcgcc accacccgcc cgtcgccgag cgccgccgtg cagccgaggg cgtcgcagcg
     1021 cgcgccggcg cgaagggtcg catcatccgg cttgcgaccg tcgccgtcgg ccttcagcca
     1081 ctgctcgacg acgaaggccg gcgtgcgccc gatcagcacg agctgccggg tgctcgcccg
     1141 aaccgcggcg ccggcgccgt cgcggtcgac gtaaacgtcg aagcgcgtcg gcgtcgcggc
     1201 cagcccgagg cccgccgccg ccgggatcag cgcggcgaga cgcaacggcg acacaaggat
     1261 cgtgaagatg atcagcgcca gcgccatcag cgccagtgct tcgactgcga aggcgggcac
     1321 aacgaccgtc gagcccgtga actcgctcac ccattgcgaa acgccgagca cttttgcgac
     1381 ggcaaaaccc atcagctccc agacagggcg gtcaagaccg aacggaaagg ccagcatcgc
     1441 cacgacggcg cagggcatca cgacgatcga cacgagcggc accgcaaggg cgttgccgat
     1501 caggccgaac gggttgatcg tgtgaaagtg gtagctgccg aacggcgccg tcgccagcgt
     1561 cgcgacgagc gtcgtcgcga gcagggcgac gccggcaacg atggcccagc gcacgacccg
     1621 gtgaacatat ccgccgggct ccggcgcggg gaagcggccg cgcgcccatt ccgccgacgc
     1681 gatcagcgcg gcgaccgccg catacgacat ctgaaagctc ggcccgagca gcgcctcggg
     1741 ctcgcggccc aggacgatca gcgcggaaag cgcgaggttg cgcatcgtca gcgccggccg
     1801 gtcgacgagg atcgcgccca gcatcaccag cgtcatcacc a
//
LOCUS       DATAIQ010000500         2250 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_196620, whole genome shotgun sequence.
ACCESSION   DATAIQ010000500 DATAIQ010000000
VERSION     DATAIQ010000500.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2250)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2250)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2250
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_196620"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            14..160
                     /locus_tag="VHN20_08310"
     CDS             14..160
                     /locus_tag="VHN20_08310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019906339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HEX2725806.1"
                     /translation="MPTLFRLLALIAIVGGIAFAAMFALATFVDPEPREMTETIPNSR
                     LPSR"
     gene            157..1089
                     /locus_tag="VHN20_08315"
     CDS             157..1089
                     /locus_tag="VHN20_08315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0009037 - tyrosine-based site-specific
                     recombinase activity [Evidence IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA];
                     GO_process: GO:0007049 - cell cycle [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific tyrosine recombinase XerD"
                     /protein_id="HEX2725807.1"
                     /translation="MSAAPQRLAALFLDMLAAERGAAGNTLQAYRRDLDDYLAFLSEI
                     QADPLKVEPAGVREFIAGLSERGLKASSTGRRLSAVRQFHKFLYAEGYATSDPTVAVA
                     GPKRGRGLPKVLSVKEVDRLLEISREAAVSGQGSPGERLRAARMHCLLELLYASGLRV
                     SELVALPVSAARTRDRFLIVRGKGSKERLVPLTDAARDAARAYLALLGQQGRAAGPWL
                     FPADSEAGHLTRQAFARDLKVAAAAAGLRSDKVSPHVLRHAFASHLLQNGADLRVVQE
                     LLGHADISTTQIYTHVLDDRLKSMVRDLHPLNQA"
     gene            1242..2243
                     /locus_tag="VHN20_08320"
     CDS             1242..2243
                     /locus_tag="VHN20_08320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019197243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX2725808.1"
                     /translation="MTDITRRSALSAAAAAAAAAAIGSGPAIAPAQAAAPATGQQAPG
                     FYRYKVGSHEVTVVTDGATSMALPDNFVVNVKKDDVNAALAAAFLEKDKLTIPYSPIV
                     VNTGSKLVVIDTGTGEANFERSKGAAGQFQKNLAASGIDRTAVDTVVISHFHGDHVNG
                     LLMADNKPAFPKAEILVPQKEWAFFMDDGEMSRAPQGRMQDVFKNARRVFDALDRKVT
                     PYEWDKEVAPGVTAVATVGHTPGHTSYVIASGSSRLFVQSDVTNVPYLFARNPGWHAV
                     FDQDPKMAEETRRKVYDMVTAEKLTLQGFHYPFPGVAHLEKDGSGYRAVPAPWSPVI"
BASE COUNT          375 a          787 c          740 g          348 t
ORIGIN      
        1 gcgaggcccg gccatgccca cgcttttccg tcttctcgcc ctgatcgcca tcgtgggcgg
       61 catcgccttc gcggccatgt tcgccctggc gaccttcgtc gacccggaac cccgggaaat
      121 gaccgagacc atcccgaact cgagactgcc gtcgcgatga gcgctgcccc gcagcgcctt
      181 gccgccctgt tcctcgacat gctggcggcg gagcgcggcg ccgccggcaa caccctgcag
      241 gcctatcgcc gcgacctcga cgactacctg gccttcctca gcgagatcca ggccgacccc
      301 ctgaaggtcg aaccggcggg ggtgcgcgag ttcattgccg gcctcagcga gcgcggcctg
      361 aaggcctcgt cgaccgggcg ccggctctcg gccgtgcgcc agttccacaa gttcctctac
      421 gcggaagggt atgcgacgtc cgatccgacg gtcgcggtgg ccggccccaa gcgcgggcgt
      481 ggcctgccca aggtcttgtc cgtcaaggag gtggaccggc tgctggaaat ctcgcgcgaa
      541 gccgcggtca gcgggcaggg ctcgcccggc gagcgcctga gggccgcccg catgcattgc
      601 ctcctcgaac tcctttacgc gagcgggttg cgcgtctcgg aactggtcgc cttgccagtc
      661 tcggcggccc gcacccggga ccggttcctg atcgtccgcg gcaagggcag caaggagcgc
      721 ctcgtgcctt tgaccgatgc cgcgcgcgat gccgcgcgcg cctatctggc gctgctgggg
      781 cagcagggcc gtgccgccgg gccgtggctg ttcccggcgg acagcgaggc aggccatctg
      841 acgcgccagg cctttgcgcg tgatctcaag gtcgccgccg ccgcggcggg cctgcgcagc
      901 gacaaggtca gcccccacgt gctgcggcac gccttcgcca gccacctcct gcagaacggg
      961 gccgatctgc gggtcgtgca ggaactgctc gggcacgccg acatctcgac cacccagatc
     1021 tacacccacg tgctcgacga ccgcctcaag agcatggtcc gcgaccttca tccgctcaat
     1081 caggcctgag cgagcgcggg aggttatccc gggctcgccc atcaacgcgc gcatctcggg
     1141 ccagccccaa gatccgtgcg agggcaggag cttacggttt cgtgaagagg cctgacggcc
     1201 aagctggact ataaggcgcc gaaccagaga gggaggattt catgaccgat atcacgcgcc
     1261 gctcggccct gtccgcggcc gccgctgcgg cggctgccgc ggcgatcggc tcaggtccgg
     1321 caattgctcc tgcgcaagca gcagccccgg ccacgggcca gcaggccccc ggcttctacc
     1381 gctacaaggt gggcagccac gaggtcactg tcgtgaccga cggagcgact tccatggcgc
     1441 tccccgacaa cttcgtcgtc aacgtcaaga aggacgatgt caacgccgcc ctcgccgcgg
     1501 cctttctcga gaaggacaag ctcacgatcc cgtattcgcc gatcgtcgtg aatacgggtt
     1561 cgaagctggt cgtgatcgac acagggaccg gtgaggccaa tttcgagcgc tcgaagggag
     1621 cggccggcca gttccaaaaa aatctggccg cgtcgggcat cgaccgcacc gcggtcgaca
     1681 cggtggtgat ctcgcatttc cacggcgacc acgtgaacgg cctgctgatg gcggacaaca
     1741 agccggcctt cccgaaggcg gaaattctcg tgccgcaaaa ggaatgggcg ttcttcatgg
     1801 acgacggcga gatgagccgc gcgccacaag ggcgcatgca ggacgtgttc aagaacgcgc
     1861 ggcgggtgtt cgacgcgctc gaccgcaagg tgacgcctta cgagtgggac aaggaggtcg
     1921 cgcccggcgt cacggccgtg gccaccgtcg gtcatacgcc cggccacacc tcgtatgtga
     1981 tcgcgtcggg atcgagccgg ctgttcgtgc agtccgacgt caccaacgtc ccgtatctgt
     2041 tcgcgcgcaa tccgggatgg catgcggtct tcgaccagga cccgaagatg gccgaggaga
     2101 cccggcgcaa ggtctacgac atggtcacgg ccgagaagct gacgctgcag ggcttccact
     2161 atccgttccc aggcgtcgcg catctcgaga aggacggcag cggctaccgc gcggtgccgg
     2221 ccccctggag cccggtcatc taaagaatct
//
LOCUS       DATAIQ010000501         2958 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_303447, whole genome shotgun sequence.
ACCESSION   DATAIQ010000501 DATAIQ010000000
VERSION     DATAIQ010000501.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2958)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2958)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2958
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_303447"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            210..965
                     /locus_tag="VHN20_08325"
     CDS             210..965
                     /locus_tag="VHN20_08325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020178774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF502 domain-containing protein"
                     /protein_id="HEX2725809.1"
                     /translation="MTAIDPRPATAAQPQSSRHWISARARIRNYFLTGLIVAGPVAIT
                     IYLAWWFIQLVDSWVKPFVPSVYLPETYLPFTIPGFGLVVAFIGLTLIGFLTANLVGK
                     TLVNLGEVVLDRMPVVRGLYKGVKQIFETVFKQDGHSFRQVGLIEWPGEGLWSLCFIT
                     EPAQGALAASLPAQEHVCVFVPCTPNPTTGYLVIMERSRVKEIDVTTDEAFKLLMSMG
                     IIQPEERAPLPGVPRLAGEPPAGMRPSREVAGA"
     gene            complement(979..>2958)
                     /gene="recG"
                     /locus_tag="VHN20_08330"
     CDS             complement(979..>2958)
                     /gene="recG"
                     /locus_tag="VHN20_08330"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003599092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HEX2725810.1"
                     /translation="HLPHGGIARELRGSIAEAPVGEPVTLAVTVAAHRPAPPGRSRAP
                     YKVLVEDETGDITLVFFNAQRPRLEKLLPKGARRFISGKIELWDGMRQMVHPDRILDE
                     RAAASLPAVEAVYGQTEGLSTRLIARYVAAALERLPTLPEWQDQAWRERNQFPAFGEA
                     LKALHSPQEAAELSEEALAKSPSRRRLAYDELLASQLALALVRSRMRRLPGRQNAGDG
                     SLVEKISGALPFALTEAQRRAVADIRNDLSSDKRMLRLLQGDVGSGKTAVALLAMASV
                     IEAGRQAALMAPTEILARQHFERIEPLARAAGLRAALLTGRERGAERRSTLLWLAEGS
                     IDIVIGTHALFQEDVAFRDLGLAVVDEQHRFGVHQRLALGAKGEAVDILVMTATPIPR
                     TLALTYFGDMDVSVLDEKPAGRQPITTRLISSERLDQVIEAIGRATKAGDRVYWVCPL
                     VAESELVDLAAAQDRFAHLQQVFGADVGLVHGKLPGRDKDAAMERFASGETKILVSTT
                     VIEVGVDVPEATVMVIEHAERFGLAQLHQMRGRIGRGQRASTCLLVYKGPLGEVAKAR
                     LEMMRETEDGFKIAEEDLRLRGEGEVLGTRQSGAPGFRLARLEADADLLPVAREDAKL
                     VIERDEDLTSERGQALRMLLYLFERDAAIKLLRAG"
BASE COUNT          427 a         1020 c         1025 g          486 t
ORIGIN      
        1 gaccatgccg accgcgagaa aggtccagcc cgccgtgaac aggagcggcc ggtgccaacg
       61 ggtggcgtcg aagccgccgg cgcgcggctt ggtggacggg tctgactcct tgtcgctgtt
      121 cacggatccg caatcctaga cgtaaggctc acttgagcgc cgcgtcgtcc tcaaatagga
      181 cttgacgggc gaagcgcaca ggtttgctga tgacggcgat cgatccgaga cccgcgacgg
      241 cggcgcagcc ccagtcttcg cgccactgga tcagcgcccg cgcccgcatt cgcaactatt
      301 ttctgacggg gttgatcgtc gccgggccgg tggcgatcac gatttacctc gcctggtggt
      361 tcatccagct cgtcgacagc tgggtgaagc cgttcgtccc gtcggtctat cttcccgaaa
      421 cgtatctgcc cttcacgatt cccgggttcg ggctcgtcgt cgccttcatc ggattgaccc
      481 tgatcggctt tctgaccgcc aacctggtcg gcaagacgct cgtcaatctc ggcgaggtgg
      541 tgctcgaccg catgccggtg gtgcgcggcc tctacaaggg cgtgaagcag atcttcgaga
      601 ccgtgttcaa gcaggacggc cacagcttcc gccaggttgg cctgatcgaa tggcccggcg
      661 agggcctgtg gtcgctgtgc ttcatcaccg agccggcgca gggcgcgctg gcggcgtcgc
      721 tgccggcaca ggagcatgtc tgcgtgttcg tgccgtgcac gccgaacccg accaccggat
      781 atctcgtcat catggagcgg tcgcgcgtca aggagatcga cgtgaccacc gacgaggcct
      841 tcaagctcct gatgtccatg ggcatcattc agccggagga acgcgcgcct ctgcccggcg
      901 tgccgcggct cgcgggcgag ccgccggcag gaatgcggcc gtcgcgcgag gtcgccggcg
      961 cgtaaaccat ccggcagctc acccggcgcg cagcagcttg atcgccgcat cgcgttcgaa
     1021 caggtagagc agcatcctga gcgcctgccc gcgctcgctc gtgagatcct cgtcgcgctc
     1081 gatcaccagt ttggcgtcct cgcgggccac gggcaggagg tcggcatcgg cctcgagccg
     1141 cgcgagccga aagccgggcg ctccggactg gcgcgttccg agcacctcgc cctcgccgcg
     1201 cagccgcaaa tcctcctcgg cgattttgaa cccgtcctcg gtctcccgca tcatctcgag
     1261 acgcgccttc gccacctcgc cgagcgggcc cttgtagaca aggaggcagg tcgaggcgcg
     1321 ctgcccgcgt ccgatgcggc cgcgcatctg gtgcagctgg gccaggccga agcgttcggc
     1381 gtgctcgatc accatcacgg tcgcctcggg gacgtcgacg ccgacctcga tcacggtggt
     1441 cgagacgagg atcttggttt cgccggacgc gaaccgctcc attgccgcgt ccttgtcacg
     1501 gcccggcagc ttgccgtgca cgagcccgac atcggcgccg aacacctgct gcagatgcgc
     1561 gaagcggtcc tgcgcggcgg cgaggtcgac gagctccgat tccgcgacga gcgggcatac
     1621 ccagtagacg cggtctccgg ccttggtggc gcggccgatc gcctcgatca cctgatcgag
     1681 gcgctcgctc gagatcagcc gcgtggtgat cggttggcgc cccgccggct tctcgtcgag
     1741 caccgacacg tccatgtcac cgaaataggt gagggcgagg gtgcgcggga tcggcgtcgc
     1801 cgtcatgacc aggatgtcga ccgcctcgcc cttggcgccg agggccaggc gctggtgcac
     1861 gccgaaccgg tgctgctcgt cgacgacggc gaggccgagg tcgcggaacg ccacatcctc
     1921 ctggaacagg gcgtgggtgc cgatgacgat gtcgatcgag ccttcggcga gccacagcag
     1981 ggtcgagcgc cgctccgcgc cgcgctcgcg cccggtcagc agggcggcgc gcagccccgc
     2041 ggcgcgggca aggggctcaa tgcgctcgaa atgctggcgg gcgaggattt cggtgggcgc
     2101 catcagcgcc gcctgacgtc ccgcttcgat gacgctggcc atggcgagca gggcgaccgc
     2161 ggtcttgccg gaaccgacgt cgccctgcag gagccgcagc atgcgcttgt ccgagctcag
     2221 gtcgttgcgg atgtcggcga ccgcccgccg ctgcgcttcg gtcagggcga agggaagcgc
     2281 gccgctgatc ttctcgacga gcgatccgtc tcccgcattc tgccgtcccg gcagccggcg
     2341 catgcggctg cgcacgaggg cgagcgccag ctgcgacgcg agcaactcgt cataggcgag
     2401 acgccggcgg ctcgggcttt tcgcgagcgc ctcctcgctg agctcggccg cttcctgcgg
     2461 gctgtgcagc gccttgagcg cctcgccaaa ggccggaaac tggttgcgtt cgcgccaggc
     2521 ttggtcctgc cattcgggca aggtcggcag gcgctcgagc gctgcggcga cgtagcgcgc
     2581 gatcaggcgc gtcgagagac cctcggtctg tccgtagacg gcctcgacgg ccggcaggct
     2641 tgcggcggcg cgctcgtcga ggatccggtc gggatggacc atctggcgca ttccgtccca
     2701 gagctcgatc ttacccgaga tgaagcggcg ggcgcctttc ggcagcagtt tctccaggcg
     2761 cggccgctgc gcgttgaaga acaccagcgt gatgtcgccg gtctcgtcct cgacgagcac
     2821 cttgtagggc gcccggctgc gccccggcgg tgccggcctg tgcgccgcga cggtcacggc
     2881 cagcgtgacc ggttcgccga ccggcgcctc ggcgatcgag cccctgagct cgcgggctat
     2941 gccgccgtgc ggaaggtg
//
LOCUS       DATAIQ010000502         2128 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_441543, whole genome shotgun sequence.
ACCESSION   DATAIQ010000502 DATAIQ010000000
VERSION     DATAIQ010000502.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2128)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2128)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2128
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_441543"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..433)
                     /locus_tag="VHN20_08335"
     CDS             complement(<1..433)
                     /locus_tag="VHN20_08335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018044122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HEX2725811.1"
                     /translation="MRLTVTTWNINSVRFRISQVRRFLAAAKPDVLCLQETKCPNDCF
                     PLKKLRSYGYPHIIQVGQKGYNGVAVVSRFPFAETDAMTFCDRDDARHVAVRLGSEAG
                     PACGVAIHNFYVPAGGDTPDPDLNAKFAHTLAFLDEMRRWGS"
     gene            complement(732..1646)
                     /locus_tag="VHN20_08340"
     CDS             complement(732..1646)
                     /locus_tag="VHN20_08340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018259482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer-membrane lipoprotein carrier protein LolA"
                     /protein_id="HEX2725812.1"
                     /translation="MLHKRDYLMTSCRRAALLMSGLVLAVAAAPGPARAQGAWFDFLL
                     GRDKPAQSPAQPAAPARQEAAPATAAKPVPLPPKRPAPATTATTVAQVPAPPAAQALP
                     PPPEPQVVTAAAPAAPAIPAGPLTEKQIVERANGYFNSIKSLVGNFAQIGGDGRRLTG
                     NLYLQRPGKVRFEYDSPATLEVIADGTSVAVRDSKLATQDIYPIGQTPLKFLLRDRIE
                     LGRDLKVTEAAPEAEGVRISIEDRSTLGGTSKITLYFDKDVTDLSRWRIIDAQGFQTT
                     VSLANLERNASVDQQMFKIEYQRLPNDR"
     gene            complement(1719..>2128)
                     /locus_tag="VHN20_08345"
     CDS             complement(1719..>2128)
                     /locus_tag="VHN20_08345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015950838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HEX2725813.1"
                     /translation="DMLYMAGGGRITRVHGPFVSDVEVEKVVAHLKTQGRPAYLEAVT
                     ADDGEDGSAGDTPVFDQGEFGSGSGDLYDQAIAIVLRDKKASTSYIQRRLQIGYNRAA
                     SLMERMENEGIVGPPNHAGKREILLEGAGADDE"
BASE COUNT          330 a          662 c          781 g          355 t
ORIGIN      
        1 tcgagcccca gcggcgcatc tcgtccagga aggcgagcgt gtgtgcgaat ttcgcgttga
       61 ggtcgggatc gggcgtgtcg ccccccgccg ggacatagaa gttatggatg gcgacgccgc
      121 acgccggacc tgcttcggac ccgagccgca cggcgacgtg gcgggcgtcg tcgcggtcgc
      181 agaacgtcat ggcgtcggtt tcggcgaacg ggaagcgcga gacgacggcg accccgttat
      241 agcccttctg gccgacctgg atgatgtgcg ggtagccgta ggaacgcagc ttcttgagcg
      301 ggaagcagtc gttcggacac ttcgtctcct gcaggcagag cacgtcgggc ttcgccgcgg
      361 cgagaaagcg acgaacctgc gagatgcgga agcggaccga gttgatgttc caggtggtga
      421 cggtgaggcg catgatgcgg tcttgcgggc agtgggagca tgatccggca aagtggccac
      481 cacttcgccg actgagatca tgcggcacaa agaggaatag cgcgtgatcg attcggtctg
      541 aattgatcac gctctggcgg atctgagcat gatccggcga agcaaatgcc cacctcgcgg
      601 aaaaagatca tgcggcttgg aaacaaagcg gatcgtcgcg acgaaccgat gccgctcgaa
      661 agaaggttgc cagcgcgctt tgacgcgcgc accgctgcgg tcgcggccgg cggcggcaag
      721 gcgcggctgc gctagcggtc gttcggcagg cgctgatact cgatcttgaa catctgctgg
      781 tcgacggacg cgttgcgctc gagattggcg agcgagaccg tcgtctggaa cccttgcgca
      841 tcgatgatcc gccacctgct cagatcggtg acgtccttgt cgaagtagag cgtgatcttg
      901 gacgtgccgc cgagcgtcga gcggtcctcg atcgaaatgc gcacgccctc ggcctccggc
      961 gccgcttcgg tgaccttcag gtcgcggccg agctcgatgc ggtcgcgcag caggaatttc
     1021 aacggcgtct ggccgatcgg gtagatgtcc tgcgtggcga gcttgctgtc gcgcaccgcc
     1081 accgacgtgc cgtcggcgat cacctcgagg gtggccgggc tgtcgtattc gaagcggact
     1141 ttgcccggac gctgcaggta gaggttgccg gtgaggcggc gtccgtcgcc gccgatctgc
     1201 gcgaagttgc cgacgagcga cttgatcgag ttgaaatagc cgttggcccg ctcgacgatc
     1261 tgtttttcgg tcagtggccc ggccgggatg gcaggcgccg ccggagctgc ggccgtgacg
     1321 acttgcggct cggggggcgg cggcaaggcc tgcgccgccg gtggcgcggg cacctgcgcg
     1381 acggtcgtcg cggtggtggc gggcgccggc cgcttcggcg gcagcggcac gggcttggcc
     1441 gcggtcgccg gggcggcctc ctggcgcgcc ggcgcagcgg gctgggcggg gctttgcgcg
     1501 ggcttgtcgc ggcccaagag gaagtcgaac cacgcgccct gcgcgcgagc agggccgggc
     1561 gcggcggcga cggcgaggac aaggccgctc atgagcaggg cggcgcgccg gcaggaggtc
     1621 atcaggtaat cccgtttgtg cagcatcggg tcgggctaac cgcaccctgt ggcgaatgtg
     1681 cgacgcgcgc gcaaagccat gcaactttcg cgatcggcct actcgtcgtc ggcgccggcc
     1741 ccctcgagca ggatctcgcg cttgccggcg tggttcggcg ggccgacgat gccttcattc
     1801 tccatacgct ccatcagcga ggcggcacgg ttgtagccga tctgcagccg gcgctgaatg
     1861 taggacgtcg aggccttctt gtcgcgcagc acgatggcga tggcctggtc gtaaaggtcg
     1921 ccggaccccg acccgaactc gccctggtcg aagaccggag tgtcgccggc ggagccgtcc
     1981 tcgccgtcgt cggccgttac ggcctcgaga taggcggggc ggccctgcgt cttcagatgc
     2041 gccaccacct tctcgacctc gacgtcggag acgaacgggc cgtgcacgcg cgtgatgcgc
     2101 ccgccgccgg ccatgtagag catgtcgc
//
LOCUS       DATAIQ010000503         2237 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_150885, whole genome shotgun sequence.
ACCESSION   DATAIQ010000503 DATAIQ010000000
VERSION     DATAIQ010000503.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2237)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2237)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2237
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_150885"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2070
                     /locus_tag="VHN20_08350"
     CDS             <1..2070
                     /locus_tag="VHN20_08350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013949595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEX2725814.1"
                     /translation="EDITERLRADASFRLLFDSNPVPMWVYDRDSLHFLAVNDAALAH
                     YGYGRGQFLSMTLLDIRPEEDRERALQFVRSASEAYITDRAWRHYKADKSEIYVIAYG
                     RALTHEGRDAILCAVVDVTERRRAVYELRTQNMRFEAAIENMTQGLAMFDGQRKLIVC
                     NRRYAEVYSLPPELVRPGTTHRQILEHRVAAGAYSGTDPAAYIQSRITNADEAKPSTK
                     LLEFPDGRSVIVSHQPMPGGGWVSTHEDITERRRTEARIEHMARHDSLTDLPNRVLLR
                     EHLEQHLARVGRGHPLAVLCLDLDHFKAVNDSLGHPIGDALLQAAASRIATCVCEADT
                     VARLGGDEFAILQVGVEQPNSATVLAQRLIQALGQPFDIHGHQVVIGTSVGIALAPFD
                     GNDPDQLLKNADMGLYRAKADGRGTFRFFEPEMDAKMKVRRALEVDLRKALANGEFEL
                     FYQPIVNLAQDELSGFEALLRWHHPERGLVSPNEFIPLAEEIGLIIPIGEWALRKACA
                     DAKLWPDPIVVAVNLSPVQFKSKNLVSTIVSALATSGLPPKRLEVEITETVLIQDNDT
                     TLAVLHQLRDLGVRISMDDFGTGYSSLSYLRRFPFDKIKIDRSFIRDLARRDDSRSIV
                     RAVTGLGSSLGMVTTAEGVETEEQLRLLRAEGCTQVQGYLFSPPKPLREIAELIEKFG
                     AQAKAVA"
BASE COUNT          400 a          748 c          716 g          373 t
ORIGIN      
        1 gaggacatca ccgaacggct gcgagccgac gcctcgttcc ggcttctctt cgacagcaat
       61 ccggtgccga tgtgggtcta tgaccgcgac agcttgcact tcctcgctgt caacgatgcg
      121 gcgctcgcgc attacggcta cggccggggc caattcctgt cgatgacgct gctcgatatc
      181 cgcccggagg aggaccgcga gcgcgcactg cagttcgtgc gcagcgccag cgaggcatac
      241 atcaccgatc gggcatggcg gcactacaag gccgacaaaa gcgagatcta cgtcatcgct
      301 tatgggcggg cgctgacgca tgagggccga gatgcgatcc tctgcgccgt cgtcgacgtt
      361 actgagcgcc ggcgcgccgt gtacgagttg cgcacgcaga acatgcgctt cgaggcggcg
      421 atcgagaaca tgacccaagg tctcgccatg ttcgacggac agcgcaagct catcgtctgc
      481 aacagacgct atgcggaggt ttacagtctc ccgccggaac tggtgcggcc cggcaccacc
      541 caccgccaga tcctggaaca ccgcgttgct gccggcgcct atagcggcac ggaccctgcg
      601 gcctacatcc aaagccgcat caccaacgcc gacgaggcca agccatcgac gaagctgttg
      661 gaattcccgg acggccgctc cgttatcgtc tcgcatcagc cgatgcccgg tggcggctgg
      721 gtgtcgacgc acgaggatat caccgagcgc cgccgcaccg aggcgcggat cgagcacatg
      781 gcccggcatg actcccttac tgacctgccg aaccgggtcc tgctgcgcga gcatctggag
      841 cagcatctcg cgcgtgtggg gcggggccat ccgcttgcgg ttctctgcct cgacctcgat
      901 cacttcaagg ccgtcaacga ctcgctgggt cacccgatcg gcgatgcgct cctgcaggcg
      961 gcggcgagcc gcatcgctac ctgcgtctgc gaggccgaca ccgtggcgcg gctcggaggt
     1021 gacgagttcg cgatcctgca ggttggagtc gagcagccca acagcgccac cgtcctggcg
     1081 caacgcctga tccaggcgct cgggcagccc ttcgatattc acggacatca ggtcgtgata
     1141 ggaacgagcg tcggcatcgc ccttgcgcct ttcgacggca acgatcccga tcagctcctc
     1201 aagaacgccg acatggggct ttaccgcgcc aaggcggacg gacgcggcac cttccggttc
     1261 ttcgagccgg agatggacgc gaaaatgaag gtgcgccgcg ccctcgaggt cgacctgcgc
     1321 aaggcgctcg ccaacgggga attcgagctc ttctatcagc cgatcgtcaa tctcgcgcag
     1381 gacgagctga gcggtttcga agccctgctg cgctggcacc accccgagcg tggattggtg
     1441 tcgccgaatg aattcatacc actcgcggag gagatcggac tgatcattcc gatcggcgag
     1501 tgggcgctgc gcaaggcctg cgcggacgcg aaattgtggc cggacccgat cgtggttgca
     1561 gtcaacctct cgccggttca gttcaagagc aagaacctgg tgtcgacgat tgtctcggcg
     1621 ctcgcaactt cggggctgcc gcccaagcgg cttgaggtcg agatcaccga gacggttctg
     1681 atccaggaca acgacaccac gctcgccgtg ctgcaccagt tgcgtgacct cggggtgcgc
     1741 atctcgatgg acgatttcgg cacgggatat tcgagcctca gctatctgcg gcggtttccg
     1801 ttcgacaaga tcaagatcga ccgctccttc attcgcgacc tcgcccggcg tgacgattca
     1861 cgctcgatcg tgcgcgcggt gaccgggctc ggatcgagcc tcggcatggt gaccacggcg
     1921 gaaggcgtcg agacggaaga gcaactccgt ctgctgcggg cggaaggatg cacgcaggtc
     1981 cagggctatt tgttcagccc tcccaagccc ctgcgcgaga tcgccgagct gatcgaaaaa
     2041 ttcggcgccc aggcgaaagc cgtggcctga gccccaccgc gcctccgagc gtcatccgga
     2101 cgaagcgctc ttccggggcc ggcgggcggg ttgccgaggc ggccgcgcgg gcgccggcgc
     2161 ggccggccag tcgaccgccc gttccaccag ttcgtcgaga gaaaaatcct cctccggccc
     2221 ggccgtgcgc ccccgga
//
LOCUS       DATAIQ010000504         3345 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_441642, whole genome shotgun sequence.
ACCESSION   DATAIQ010000504 DATAIQ010000000
VERSION     DATAIQ010000504.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3345)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3345)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3345
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_441642"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1121
                     /locus_tag="VHN20_08355"
     CDS             <1..1121
                     /locus_tag="VHN20_08355"
                     /inference="COORDINATES: protein motif:HMM:NF025154.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX2725815.1"
                     /translation="SYAITLIVNCVGILQDGPGGDTQSAHGDFVAHLLRALGKAGRPV
                     PLIHISIPGEPADERTAFSITKRKADDLIAASGAPYAILRPGFVIAPAAFGGSALVRA
                     LAASPFDLPEVERARPFPAIGIADLADTVARLADRWNGGAWSDADWDVMHPDQTTVAA
                     VIAAHRRWLGTSSRRRITLPAGLLNVGAWAADLAGWLGWRPPIRSTALAELRRGVRGD
                     PGPWLAATGLEPRPLVGVLREMPATVQERWFARLYIMKGLIIPSLVVFWVVSGLIALT
                     AYPAAVGILTSHGFSPALAHVTTVLSSLLDIGVGLAIAHRRTCRMGLRVGIAVSLFYM
                     AGAALITPELWIEPLGALVKTGPAIVLMLVALAVLDER"
     gene            1111..1578
                     /locus_tag="VHN20_08360"
     CDS             1111..1578
                     /locus_tag="VHN20_08360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007604170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DCC1-like thiol-disulfide oxidoreductase family
                     protein"
                     /protein_id="HEX2725816.1"
                     /translation="MNGDQAGVPNEVWADDGIILYDGVCVLCSGWMRFVIARDRTCRF
                     RFTPIQSPYGQALASALGIDPADPDTNAVLVDRRIYRRSDAALAVLRTLPRWRWVRGL
                     GVLPRRLRDGLYNVVARKRYALFGKHGHCDMGERSFAGRIVTTMAPAAEASNP"
     gene            complement(1589..2509)
                     /locus_tag="VHN20_08365"
     CDS             complement(1589..2509)
                     /locus_tag="VHN20_08365"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEX2725817.1"
                     /translation="MPPSSAAPSRKLAKDNYARAVLFMLLAAVLLPVLNASIQYLAPT
                     YPVAELLWLRYAGHLAFMLVVFAPRHGLALFASTRPGLQVARSLLFCGSTFLTFYALG
                     FVPLAAAAAIFLTAPLIVTGLAPFVLGERVGLTRTLVVSAGFLGALIVVRPGSGALHW
                     AAFLIFGSATASAVTQLLSRKLAGHDSPETSNTYMVTAGFLLASVPLPFFWHPPASHW
                     DAFLFVMLGVLGGLGHYFVVRAFELAPAPFVSPFNYAQILTAALVGFFAFGQLPDLWT
                     WCGAGIIAASGLFILFYERARAKGLARARS"
     gene            complement(2527..3282)
                     /locus_tag="VHN20_08370"
     CDS             complement(2527..3282)
                     /locus_tag="VHN20_08370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010684195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX2725818.1"
                     /translation="MPNKVSADVLNDLAPAGKVVAAINFGNIVLAQNDPATGEPRGIS
                     ADLARELARRLGVPLDFVAYDTAGKVSDAVDTGAWTICFLAIEPARAAAIAFTPPYVV
                     IEGTYLVRADSPLQRVEEVDRAGIRIAVGAKTAYDLYLTRTIKNAELVRAPDSQAALE
                     MFVQDGLDAAAGVRQPIVRFAAGNPGLRVMDGRFMAIEQAMGVPKARQAGARYLSAFI
                     EEMKASGFVATGLQRSGQGDAMVAPPSPLQPGP"
BASE COUNT          530 a         1097 c         1205 g          513 t
ORIGIN      
        1 atagctacgc cataactctc atcgtcaact gcgtgggcat tttgcaggac ggtcccggcg
       61 gcgacacgca gagcgcccac ggcgatttcg tcgcgcatct gctccgcgcg ctcggcaagg
      121 ctgggcggcc cgtgccgctg atccacatat cgatccccgg cgagcccgcc gacgagcgca
      181 ccgctttcag catcaccaag cggaaggcgg acgacctgat cgccgcaagc ggagcacctt
      241 acgcgatcct ccggcccggc ttcgtgattg caccggcggc gttcggagga agcgcgctcg
      301 tccgcgcgct cgctgcgtcg cctttcgacc tgccggaggt cgagcgcgcg cgaccgtttc
      361 ccgcgatcgg gatcgcggac ctcgccgaca cggtcgccag gctggccgac cgctggaacg
      421 gcggcgcctg gtccgatgcc gactgggacg tcatgcaccc cgatcagacc accgtcgcgg
      481 ccgtcatcgc ggcgcatcgg cgctggctcg ggacgtcatc gcgccggcgc atcacgcttc
      541 cggcagggct cctgaatgtc ggcgcatggg ccgccgatct cgcgggctgg ctcggctggc
      601 gcccgccgat ccgcagcacc gcgcttgcgg aactccggcg cggcgtccgc ggggatcctg
      661 ggccgtggct cgcggcgacc ggcctcgagc cacggccgct tgtcggggtt ttgcgcgaga
      721 tgcccgcgac ggttcaggag cgatggtttg cgcggctcta cattatgaag ggcctgatca
      781 tcccctccct ggtcgtgttc tgggtggttt cggggctgat cgctctgacg gcgtatccgg
      841 ccgcggtcgg catcctgacg tcgcacgggt tttcgccggc gctcgcgcac gtgacgaccg
      901 tgctgagcag cctcctcgac attggcgtcg gtctggcgat tgcgcaccgt cgcacgtgtc
      961 gcatgggcct tcgggtgggc atcgcggtat ccctgttcta catggcgggt gcggcgctga
     1021 tcacgcccga gctctggatc gagccgctcg gcgcgctggt gaagacgggc ccggcgatcg
     1081 tgctgatgct ggtggctttg gcggtgctcg atgaacggtg accaggccgg cgtgccgaat
     1141 gaggtatggg ccgacgacgg catcatcctc tacgacggcg tctgcgtttt gtgctcggga
     1201 tggatgcggt ttgtcatcgc ccgtgatcgc acctgccggt ttcggttcac gccgatccag
     1261 tctccttacg gacaggcttt ggcgagcgcg ctcggcatcg atccggcgga cccggacacc
     1321 aatgcggtcc tcgtcgaccg gcggatttac cgtcgctccg acgcggcgct cgctgtgctc
     1381 cgaacattgc cgcgctggcg atgggtgcgc gggctcggag tattgcctcg acgcctgcgc
     1441 gacggtcttt acaacgtcgt ggcgcgcaag cgatacgcgc tgttcgggaa gcacgggcat
     1501 tgcgacatgg gcgagcgctc cttcgccggc cgcatcgtga cgaccatggc gccggccgca
     1561 gaggcgagca acccttaggc ttgcgcggtc acgatctggc acgggccagt cccttggcgc
     1621 gggcgcgctc gtaaaatagg atgaacaggc cgctggctgc gatgatgccg gcgccgcacc
     1681 acgtccacag gtccggcagt tggccgaacg cgaagaaacc gaccagcgcc gcggtgagga
     1741 tctgggcgta gttgaatggc gacacgaagg gggccggcgc aagctcgaac gcgcgcacga
     1801 cgaagtaatg gccgaggccc ccgagcacgc cgagcatcac gaacaggaat gcgtcccaat
     1861 ggctggccgg cgggtgccag aagaacggca gcgggaccga cgcgagcaga aatcccgccg
     1921 tcaccatgta ggtgttggac gtctccgggg agtcgtggcc ggcgagcttg cgcgacagga
     1981 gctgggtcac ggcggaagcc gtggcgctgc cgaagatcag gaaggccgcc caatgcaggg
     2041 cgcccgaacc gggccgcacg acgatcaggg cgccgaggaa gccggcggac accacgagcg
     2101 tgcgcgtgag cccaactcgt tcgccgagaa cgaacggcgc caggcccgtg acgatcagag
     2161 gcgccgtgag gaagatcgcc gcggcggccg ccagtggcac gaagccgagc gcgtaaaacg
     2221 taaggaatgt cgagccgcag aacagcagcg aacgggccac ctggaggccg ggccgcgtgg
     2281 acgcgaaaag cgcgaggccg tgccgtggcg cgaataccac cagcatgaag gcgagatggc
     2341 cggcatagcg cagccacaac agctccgcga cgggataggt cggcgcgaga tattggatcg
     2401 aggcgttgag caccggcagc agcaccgccg cgagcagcat gaacagcacg gcgcgggcat
     2461 aattatcctt cgcgagcttg cgagaaggcg ccgcgctgct cggaggcacc agctggtcgg
     2521 gaacgctcaa gggcctggct ggagagggga ggggggcgcg accatggcgt ctccctggcc
     2581 gctccgctgc agtcccgtgg cgacgaagcc ggacgccttc atttcctcga tgaacgcgct
     2641 gagatagcgc gcgcccgcct gccgcgcctt cggcacgccc atcgcctgtt cgatggccat
     2701 gaagcggccg tccatgacgc gcagcccggg attgccggcg gcgaagcgca cgatcggctg
     2761 gcgcacgccg gcggcggcat cgaggccgtc ctgcacgaac atctccagcg cggcctgtga
     2821 atcgggcgcg cgcacgagct cggcattctt gatggtgcgg gtcaggtaga ggtcgtaggc
     2881 ggtcttggca ccgacggcga tgcgtatgcc ggcgcggtcg acctcctcga cccgttggag
     2941 cggcgagtcg gcgcgcacga gataggtgcc ctcgatcacc acgtaaggcg gcgtgaaggc
     3001 aatcgcggcg gcgcgtgccg gctcgatggc gaggaagcag atcgtccagg cgccggtgtc
     3061 gaccgcgtcg gagacctttc cggcggtgtc gtaggcgacg aagtccagcg gcacgccgag
     3121 gcgccgggcc agctcgcgcg ccagatcggc cgagatgccg cgcggctcgc ccgtggccgg
     3181 gtcgttctgc gccagcacga tgttgccgaa attgatcgcc gccacgacct tgccggcggg
     3241 cgccaggtcg ttgagcacgt cagcggaaac tttgttgggc atgaggacct ccgggacgtg
     3301 tgcttgttgc ggcaagggcg ccgtcctgac aaggccgcgc gcctt
//
LOCUS       DATAIQ010000505         2142 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_26237, whole genome shotgun sequence.
ACCESSION   DATAIQ010000505 DATAIQ010000000
VERSION     DATAIQ010000505.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2142)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2142)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2142
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_26237"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            25..>2142
                     /locus_tag="VHN20_08375"
     CDS             25..>2142
                     /locus_tag="VHN20_08375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012321568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006401 - RNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rne/Rng family ribonuclease"
                     /protein_id="HEX2725819.1"
                     /translation="MANKMLIDASHPEETRVVVVRGQKVEEFDFESAHRRQLRGNIYL
                     AKVTRVEPSLQAAFVDYGGNRHGFLAFSEIHPDYYQIPVADRQALLEEEARHERDAER
                     DEERNDRRRHRRSAKARASADTVASEPIDSLAPGPSAEQPEASAAPVDFDGWGSAAPR
                     QSDDESIAADERESADGSADESRVAAGNGDSEDAGDAADAVSAAGPDEVADAGEAAEN
                     GDGHAEEDMVEDVGGADALEEVPDRRHRPHRRHYKIQEVIKRRQILLVQVVKEERGNK
                     GAAMTTYLSLAGRYSVLMPNTARGGGISRKITNAEDRKRLKEVAQELEVPEGMGIILR
                     TAGASRTKAEIKRDFEYLMRMWESVRELTLTSSAPALVYEEGSLIKRAIRDLYNKDID
                     EVLVAGDDGYREAKDFMRMLMPSHAKTVKLYKEQQPLFAKYGVEAQLDAMFSNQVQLK
                     SGGYLVINPTEALVSIDVNSGRATREHSIEDTALKTNLEAAEEIARQLRLRDLAGLIV
                     IDFIDMEEKRNNRAVEKKVKDCLKNDRARIQVGRISPFGLMEMSRQRIRTGVLESSSL
                     PCPHCAGTGSVRATPSIALHILRSLEETLIRNSANNLIVRTRAEVAFYILNQKRVHLH
                     DLESRFGVEIAIVADDSLSGTTVFAVERGEPAARIEHKGVATGVQIDAIAIDDEVVET
                     ESDTETEDADESAPRDELAEANGE"
BASE COUNT          421 a          703 c          718 g          300 t
ORIGIN      
        1 cgatcgccat gccgagagtt cgttatggcc aacaagatgc ttatcgatgc ctcccacccc
       61 gaggaaacgc gggtggtcgt ggtccgcggt cagaaggtcg aggagttcga cttcgagtcc
      121 gcgcacagga ggcagctgcg cgggaatatc tatctcgcga aggtcacacg ggtagagccg
      181 tcgcttcagg cggccttcgt cgactacggc ggcaaccgcc acggcttcct cgccttcagc
      241 gagatccatc ccgattacta ccagattccg gtcgccgacc ggcaggcgct cctcgaagag
      301 gaagcgcgcc atgaacgcga cgccgagcgc gacgaggagc gcaacgatcg ccgccggcac
      361 cgccggtccg ccaaggcacg cgccagcgcc gacacggtgg cgagcgagcc catcgactcc
      421 ctggcccccg ggccgtccgc cgagcagccg gaagcatccg ctgcaccggt cgatttcgac
      481 gggtggggct cagccgcgcc gcgccagtcg gatgacgaaa gcatagccgc ggacgagcgc
      541 gaatctgcgg acggctcggc cgacgagagc cgcgtggccg caggaaacgg cgactcggaa
      601 gatgcgggcg acgcggcgga tgcggtgagc gcggccgggc ccgacgaagt cgccgatgcc
      661 ggcgaggcgg ccgagaatgg tgacgggcat gccgaagagg acatggtcga ggatgtcggc
      721 ggcgccgacg ccctggagga ggtgccggac cggcgccatc gccctcatcg ccgccactac
      781 aagatccagg aagtgatcaa gcggcgccag atcctgctgg tgcaggtggt caaggaggag
      841 cgcggcaaca agggcgccgc catgaccacg tatctctcgc tcgcgggccg ctattccgtg
      901 ctgatgccga acaccgcccg cggcggcggc atctcgcgca agatcaccaa tgccgaggac
      961 cgcaagcgcc tcaaggaagt ggcgcaggag ctcgaggttc cggaaggaat gggcattatc
     1021 ctgcggaccg ccggagcgtc ccgcacgaag gccgagatca agcgtgactt cgaatacctg
     1081 atgcgcatgt gggagagtgt gcgtgagctg acgctcacgt cgtccgcgcc ggcgctcgtc
     1141 tacgaggaag gctcgctcat caaacgcgcc atccgcgatc tctacaacaa ggacatcgac
     1201 gaggttctgg tagccggcga tgacggctac cgcgaggcca aggacttcat gcgcatgctg
     1261 atgccgagcc acgcgaagac cgtgaagctc tacaaggaac agcagccgct ttttgccaaa
     1321 tacggggtcg aggcgcagct cgacgcaatg ttctccaacc aggtccagct caagtcgggc
     1381 ggctacctgg tcatcaatcc gaccgaggcg ctcgtctcga tcgacgtcaa ctcgggccgc
     1441 gcgacgcgcg agcacagcat cgaagatacg gcgctcaaga ccaatctcga ggccgccgag
     1501 gagattgccc gccagctgcg gctgcgcgac cttgccggcc tcatcgtgat cgacttcatc
     1561 gacatggagg agaagcgcaa caaccgcgcc gtcgagaaga aggtcaagga ttgcctcaag
     1621 aacgaccggg cgcgcatcca ggtgggccgc atctcgccgt tcggcctgat ggagatgtcg
     1681 cgccagcgca tccgcaccgg cgtactggaa agctcgtcgt tgccgtgccc gcattgcgcc
     1741 ggcaccggct cggtgcgcgc gaccccgtcc atcgccctgc acatcctgcg ctccctcgag
     1801 gagacgctga tccggaattc ggccaacaac ctgatcgtgc gcacccgcgc cgaggtcgcc
     1861 ttctacatcc tcaaccagaa gcgcgtgcac ctgcacgatc tcgagtcgag attcggggtc
     1921 gagattgcca tcgtggcgga tgactcgctt tcgggaacga ccgtgttcgc cgtcgagcgc
     1981 ggcgagccgg cggcccggat cgagcacaag ggcgtggcga ccggcgtgca gatcgacgcc
     2041 atcgccatcg acgacgaggt ggtcgagacc gagagcgata ccgagacgga ggacgccgac
     2101 gagtcggctc cgcgcgacga gcttgcggaa gccaacggcg aa
//
LOCUS       DATAIQ010000506         4521 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_441732, whole genome shotgun sequence.
ACCESSION   DATAIQ010000506 DATAIQ010000000
VERSION     DATAIQ010000506.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4521)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4521)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4521
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_441732"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..429
                     /locus_tag="VHN20_08380"
     CDS             <1..429
                     /locus_tag="VHN20_08380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725820.1"
                     /translation="LKPRQPPQTCPDRDDAGNRILRPVVEYPNMQASHPETKIGVKGV
                     GTAITGARIYRGRAIPELAGKLLVSDWSADFKKPSGQIFIADPGGEDGQLWPYRRALQ
                     IDSRIIGLAEDASGEIYVLTNETLGPYGTTGKVLRLVARP"
     gene            complement(614..1582)
                     /locus_tag="VHN20_08385"
     CDS             complement(614..1582)
                     /locus_tag="VHN20_08385"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008965298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipid kinase"
                     /protein_id="HEX2725821.1"
                     /translation="MTQSDDADLAEGRRPAGGERPAQARPARTHRALLLANRRSRRGA
                     ELVDPAVDALRGHGIEVVLADCATREDLAEKILEQAPAIDRVVVAGGDGTMNAAAPAL
                     VGTGLPLGILPAGTANDLARTLGIPEDVAAAARIIAEGHIRTIDLGTVNDNPFFNVAS
                     IGLSVELTKVLTRDFKRRYGKLGYGLAAFRVLARARPFRATIRSDDGEARVRTLQVAV
                     GNGRYYGGGNAVEKTAAIDDQHLDLYSLEFKQAWKLALLARSFRYGEHGAWDEVRAVR
                     GKEFDILTRSPKPVNADGEIVTQTPAHFRIVPNAVSVFCPRERAEG"
     gene            1933..2343
                     /locus_tag="VHN20_08390"
     CDS             1933..2343
                     /locus_tag="VHN20_08390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725822.1"
                     /translation="MNRYFLHCTDGIDMVLDGQGIRAETREEALRYASALSTRLMHSV
                     PDYDDWESWIVCVYDAYDQMVGTVPFRDAPRVGALREITDAAEASPAAAGPVASSSAR
                     TYPSVRDVCRHVRSVCAAAAARFRRTAPGEEEAA"
     gene            complement(2670..2891)
                     /locus_tag="VHN20_08395"
                     /pseudo
     CDS             complement(2670..2891)
                     /locus_tag="VHN20_08395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012334834.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
     gene            3462..3764
                     /locus_tag="VHN20_08400"
     CDS             3462..3764
                     /locus_tag="VHN20_08400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725823.1"
                     /translation="MDRLPLRNLSRLVLDAVQCLLVAHDYVDEELRSETRDAIDCLRN
                     ADMADVEAAATVLRHVAPHLHDVEASLNGANRSLTARKIRDVRQRVLDVTALAAEG"
     gene            3952..>4521
                     /locus_tag="VHN20_08405"
     CDS             3952..>4521
                     /locus_tag="VHN20_08405"
                     /EC_number="3.1.3.1"
                     /inference="COORDINATES: protein motif:HMM:NF020976.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004035 - alkaline phosphatase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase D family protein"
                     /protein_id="HEX2725824.1"
                     /translation="MRASTGFVFAALAFCGMASAQERDPVLTRIAFGSCAHQDKQQQI
                     WDAVLGYKPELFIFAGDNVYGDERNGEDVPEAERMTTLRAAYAKAKQIPGYNALRATI
                     PHLATWDDHDFGHDGGGDFAYKGEAQAQFLDFWNAPAADPRRAREGVYDARSFGPAGM
                     RVQVLLLDTRYFRSALKRTDQRNAPGKERY"
BASE COUNT          714 a         1541 c         1570 g          696 t
ORIGIN      
        1 ctgaagccgc gccagccgcc gcaaacctgt cccgatcgcg acgacgccgg caaccgcatc
       61 ctgcgccccg tggtcgaata tcctaacatg caggcctcgc atccggagac gaagatcggg
      121 gtcaagggcg tcggcaccgc catcaccggc gccaggatct atcgcggccg cgccatcccc
      181 gagcttgccg gcaagctgct cgtgtccgac tggagcgccg acttcaagaa accctccggg
      241 cagattttca tcgccgaccc gggcggcgag gacgggcagc tctggcccta ccgccgcgcc
      301 cttcagatcg acagccgcat catcggcctc gccgaagatg cgtcgggcga gatctacgtc
      361 ctcaccaacg agacccttgg tccctacggc acgaccggca aggtgctgcg gctggtggcg
      421 cggccgtgag gggcgccccg cgacgggacc tgttaccgat gtgtccgaac aggtgttacc
      481 tatgtctccg aacaggtgtt acctatgtct ccggactgaa catcaagccc ggcaatgaca
      541 aggcagggcg tgtggacgtg tcccccgttt gcgtgatcat tccgaccgaa gcgagtccgc
      601 acccgccccg ccatcacccc tccgcccgct cgcgcgggca gaacacgctg accgcgttcg
      661 gcacgatgcg gaaatgcgcg ggcgtttggg tgacgatctc gccgtccgcg ttcacgggct
      721 tgggcgagcg ggtcaggatg tcgaattcct tgccgcgcac ggcgcgcacc tcgtcccagg
      781 cgccgtgctc gccgtagcgg aaggagcgcg ccagcagcgc cagcttccac gcctgcttga
      841 actcgaggct gtagaggtcg aggtgctggt cgtcgatggc ggcggtcttc tcgacggcgt
      901 tgccgccgcc gtagtagcgg ccgttgccga cggcgacctg cagggtccgc acgcgcgcct
      961 cgccgtcgtc gctgcggatc gtcgcccgga acgggcgggc gcgcgccagc acgcggaagg
     1021 ccgcgaggcc gtagccgagc ttgccgtagc ggcgcttgaa gtcgcgcgtc agcaccttgg
     1081 tcagctcgac gctgaggccg atgctggcga cgttgaagaa cggattgtcg ttgaccgtgc
     1141 cgagatcgat ggtgcggata tgcccctcgg cgatgatgcg cgccgcggcg gcgacgtcct
     1201 ccgggatgcc gagggtgcgg gcgaggtcgt tggcggtgcc ggcgggcagg atgccgaggg
     1261 ggagccccgt gccgacgagc gccggcgcgg ccgcgttcat ggtgccgtcg ccgccggcga
     1321 cgacgacccg gtcgatcgcg ggcgcctgct cgaggatctt ttccgcaagg tcctcgcgcg
     1381 tggcgcaatc ggcgagcacg acctcgatgc cgtggccgcg cagcgcgtcg acggccggat
     1441 cgaccagctc ggcgccgcgg cggctcctgc ggttggcgag cagcagcgcg cggtgcgtcc
     1501 gcgccggccg cgcctgcgca ggccgctcgc caccggccgg ccttcgtcct tcggcgaggt
     1561 cggcgtcgtc gctttgcgtc atgcccccag gatccggttc gttggcgtca cgggaaatgt
     1621 aacggcggct ggccggaaat gttcatccgc ggcgcggcgc cgccgtttac gtctcgttta
     1681 cgcctggggc ggcgcggaca cgtttcggtc gcggcgccaa cccaaccccg tcacgctcgg
     1741 gacacgcggc aagcctcaac tcgcagggtg agacgccgac tcagaacgcg caggacgcgc
     1801 cggaggtcgg cgcgctcccg ttggcggaag gaatcggcaa ggcggagacg ccagccggtc
     1861 ggcatcgcgc gacgggtcgt cctcatgcac cagaatcggt ccggcccccc ccgcatttga
     1921 cgagagagag caatgaaccg atattttctc cactgcacag acggcatcga tatggttctc
     1981 gacgggcagg gcatcagggc cgagacccgc gaagaggcgc tgcgctacgc ctcggcgctg
     2041 tccacacgcc tcatgcacag cgtgcccgat tacgacgact gggagtcctg gatcgtgtgc
     2101 gtgtacgacg cctatgacca gatggtcggc accgtcccgt tccgcgatgc gccccgggtc
     2161 ggggcgctcc gcgagatcac ggacgcggcc gaggcttcac cagcggccgc gggacccgtg
     2221 gcgtcctctt cggcaaggac ctatccgtcg gtgcgcgacg tgtgccggca cgtgcggtcc
     2281 gtctgcgcgg cggccgcggc gaggttccga cggacggcgc cgggcgagga ggaggcggcc
     2341 tagggcggga tcaattcgga ttgaattgat cccgctctat ttcgtattga gtcgcatgat
     2401 ctttctcggc gaagcggtat ccacccccgg atcaagtccg ggggcaggct ttcgccggat
     2461 catgctctag cgccgtgcta cccgcgagcg atgaagtcga gcagtcggcc ccggctcttc
     2521 caaagcgaag ggtcccggat cggatccggg accagcctcg ttcggcaaac tgccgcgact
     2581 ccggctcaac tccggatgga ggatgccgcg gacgcgaccg cgcggaacgc gcaggagcac
     2641 gtcataggtg tgcggcaggc cagaaccgct cagcgtcgca gcgaccccgg ccgctcgtgc
     2701 cggcggtcgc agaggttttg cggcacgtcg atgccggtgc tcgcgtattc gccgagcttg
     2761 ttgcgcagcg tgcggatcga gatgcccagg attctcgccg catgcgtgcg gttgccgagg
     2821 caatggtcga gggtctcgag gatgaggtcg cgctcgacct cggccaccgt gcggccgacg
     2881 agggcgcgcg tgccgagcac gatcgtgctg gccgcgccgc cagccggatc ggccgccatg
     2941 cagccggttg cgggcacgcg aatgaaatca ggctggggct gcaacatcga aatccctcgt
     3001 ctcgccgcgg ccccccaggc ccgcaacctc gcggtcgagc gtggttgaag cgtggctgtt
     3061 cgaggaacga gttcaggcat ttttgtgcgg cccggccaca aaggttaagg acccccgccg
     3121 ccgggccggt ggagcgcggc ggagtcgcac atgccgcacg aagacgcgtg cgtcacgacg
     3181 atccgcacgc gcaggcgcct ttaccacgtt cggcaagaca ttcttaggcc gccgcctgca
     3241 tcgttgcctc gggctggggg gccaccggga ctgggagtgg cccatgacga tcacacgtgc
     3301 ccgcgatgca gggtcgaact gcatcaggct tgtctcaata gcagctcttg gccggcaacg
     3361 aacgccaggc gcgcgccgca cgataacgac cgccgcgttg ccccgagtgt cgcaagcacc
     3421 gcgcgagaaa gcggtcgcgc atgtgtgaca gcgagcttca catggatcgc cttcccttgc
     3481 gcaacctgtc ccggctcgtg ctggacgccg ttcaatgcct cctcgtcgcg catgactacg
     3541 tcgacgagga gctgcggagc gaaacgcgcg acgcgatcga ctgcctgcgc aacgccgaca
     3601 tggccgacgt cgaagccgcg gcaacggtcc tgcgccacgt cgcgccacac ctccacgacg
     3661 tggaggcgag cctcaacggc gccaaccgtt cgctgacggc acgcaagatc cgcgacgtca
     3721 ggcagcgggt cctcgacgtg acggcgctgg cggctgaagg ttagcgcatc ctggcctcgc
     3781 cggcacgacg cccgacaacg cgcgtcgtgg ccggcggcgc cgttgccggt cggccatgtg
     3841 gtttgacaag catgcgaatt gggggtcccc ttgcaactgc ggcgggcacc tggcgtttcg
     3901 tcatcgagcc gtcgcgcagg tggtcggcga cgcgcaggag cttggacgaa gatgcgcgcg
     3961 tcgacgggtt tcgtttttgc cgcactggca ttctgcggca tggcatcggc ccaggagcgc
     4021 gatccggtgc tgacgcggat cgccttcggc tcgtgcgcgc accaggacaa gcagcagcag
     4081 atctgggatg cggtcctcgg ctacaagccc gagctcttca tctttgcggg ggacaacgtc
     4141 tacggcgacg aacgcaacgg cgaggacgtg ccggaggcgg agcgcatgac gaccctgcgc
     4201 gcggcctacg cgaaggcgaa gcagatcccc ggctacaacg cgctcagggc gaccatcccg
     4261 cacctcgcca cctgggacga ccacgacttc ggccacgacg ggggagggga cttcgcctac
     4321 aagggcgagg cgcaggcgca gttcctcgat ttctggaacg cgccggccgc ggacccgcgc
     4381 cgcgcccgcg aaggcgtgta tgacgccaga tccttcggac cggccggcat gcgcgtgcag
     4441 gtgctgctgc tcgacacgcg ttatttccgc tcggccctca agcggaccga ccagcgcaac
     4501 gcacccggca aggaacgcta t
//
LOCUS       DATAIQ010000507         4810 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_395935, whole genome shotgun sequence.
ACCESSION   DATAIQ010000507 DATAIQ010000000
VERSION     DATAIQ010000507.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4810)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4810)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4810
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_395935"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..994
                     /locus_tag="VHN20_08410"
     CDS             <1..994
                     /locus_tag="VHN20_08410"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014493972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071111 - cyclic-guanylate-specific
                     phosphodiesterase activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="GGDEF domain-containing phosphodiesterase"
                     /protein_id="HEX2725825.1"
                     /translation="AERLLQALSAPLNIEGHRVHITASIGVALAPHDGLDPDELLKKS
                     DMALYAAKADGRGVFRFFEPAMDDAAQARRALEMDLRNALGRGEMEVYFQPLFDLASS
                     RICACEALLRWHHPERGLISPGEFIPIAEETSLIIQLGEWVLKQACAEAMQWPQDVRV
                     AVNLSPAQFKDGNLTGVVMRALARSGLAADRLELEITETVLLHDSHATIRAMGQLQKL
                     GVRMSLDDFGTGYSSLSYLRKFPFQKIKIDGSFVRDLGADDGSVAIVRAVAGMGADLG
                     MDIVVEGIETEAQLRIVKAEGCREGQGYFLGRPMPVEAIRKRIAEEANGARKVA"
     gene            complement(1039..1980)
                     /locus_tag="VHN20_08415"
     CDS             complement(1039..1980)
                     /locus_tag="VHN20_08415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012329706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="crotonase/enoyl-CoA hydratase family protein"
                     /protein_id="HEX2725826.1"
                     /translation="MLVESFRRPGDAPLAVPGFLQPDLAAILTTPERPLFGLRQLEVD
                     WEAATGTLWTHMRFRGRPSYNPDMLIDFRAWQDGIGRMFAGREPDLRYLVLGSRFPGV
                     FSLGGDLNQFAGWIRKRDYDALVRYGKACVHILHRNMAGLELPVVTIGLVQGDALGGG
                     FESVLSFNVIVAEKGAKFGFPENLFGLFPGMGALSLLARRIGTARAETMLLSGATYTA
                     EEMHDMGVVQILAEPGEGTAAVRHYIERHGRRHNGHRAVYRAAREVNPVPLAELERIV
                     EIWAEAALNLRDKDLRVMERLVAAQDRLLGIPAVAAG"
     gene            complement(2590..3210)
                     /locus_tag="VHN20_08420"
     CDS             complement(2590..3210)
                     /locus_tag="VHN20_08420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015669390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1080 domain-containing protein"
                     /protein_id="HEX2725827.1"
                     /translation="MKRLSKMHAAAAALLVFACAGVGNAPPAAAQSGGSTVLFDGKSL
                     DNFNKVGDANWRIEDGAVVADKGTGFLVTKTSYTDFQLRAEFWADEDANSGIYIRCTD
                     PAKITADNSYEVNIYDKRPEPIYGTGAIVNVAKVDPMPKAGGKWNVYEIEAKGPQFTV
                     VLNGQKTVDGARDDKFKSGPIALQYAPGVVKDKGVIKFRKVEIRPL"
     gene            complement(3385..4005)
                     /locus_tag="VHN20_08425"
     CDS             complement(3385..4005)
                     /locus_tag="VHN20_08425"
                     /inference="COORDINATES: protein motif:HMM:NF018178.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1080 domain-containing protein"
                     /protein_id="HEX2725828.1"
                     /translation="MKRLSKTHSAAAALLAFACAGMWNAPPAAAQSGGPTVLFDGTNL
                     DNFNKVGDANWRIEDGAVVADKGVGFLVSKNSYADYQLRIEFWADDDVNSGIYMRCSN
                     PAEPTDKTCYEANIYDKRPDPTFGTGAIVHLAKIESPMKVGGKWNTYEITAKGPEITV
                     VLNGQTTVKGLKDEQLKSGPVALQYGESVVKGKGVIKFRKVEIRAL"
     gene            complement(4108..4572)
                     /locus_tag="VHN20_08430"
     CDS             complement(4108..4572)
                     /locus_tag="VHN20_08430"
                     /inference="COORDINATES: protein motif:HMM:NF018430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1203 domain-containing protein"
                     /protein_id="HEX2725829.1"
                     /translation="MFRITGLPAEHFSHLFALSDAELAAQGAVRRIADGRRPGYPCRV
                     SLTDAREGDELILLNYEHHAVATPYRMRFAIYVRRGEETFDRVDEVPAQLRERTLALR
                     AYDADGMMAGWKLVEGNAVEDAIAALFADPRAAYLHIHYAAPGCYAARVERA"
BASE COUNT          732 a         1599 c         1663 g          816 t
ORIGIN      
        1 ggccgaacgc ctgctgcagg ccctctcggc gcctttgaac atcgaaggac accgggtgca
       61 tatcaccgcc tcgatcggcg tcgcgctcgc gccgcacgac ggcctcgatc cggacgagct
      121 cctcaagaag agcgacatgg cgctctacgc cgccaaggcc gacggccgcg gcgtgttccg
      181 cttcttcgag ccggccatgg acgatgcggc acaggcgcgc cgcgcgctcg agatggacct
      241 ccgcaacgcc ctcgggcgcg gcgagatgga ggtgtatttc cagccgctct tcgatctggc
      301 cagcagccgc atctgcgcct gcgaggcgct cctgcgctgg caccatccgg agcgcgggct
      361 gatctcgccg ggcgagttca tcccgatcgc cgaggagacg agcctgatca tccagctcgg
      421 cgagtgggtg ctcaagcagg cctgcgccga ggccatgcag tggccgcagg atgtgcgcgt
      481 cgccgtcaac ctgtcgccgg cgcagttcaa ggacggcaac ctgaccggcg tcgtgatgcg
      541 cgccctggcc cgttcgggcc tcgccgccga ccggctcgag ctcgagatca ccgagaccgt
      601 gctcctgcac gacagccacg ccaccatccg ggcgatgggc cagcttcaga agctcggcgt
      661 gcgcatgtcg ctcgacgatt tcggcaccgg ctattcgtcg ctcagctacc tgcgcaagtt
      721 cccgttccag aagatcaaga tcgatggctc cttcgtccgg gatctcggcg ccgacgacgg
      781 ctcggtcgcg atcgtccgcg ccgtcgccgg catgggcgcc gatctcggca tggacatcgt
      841 cgtcgagggc atcgagaccg aagcgcagct gcgcatcgtc aaggccgaag ggtgccgcga
      901 gggccagggc tattttctcg gccgccctat gcccgtcgag gccatcagga agcgcatcgc
      961 cgaagaggcg aacggcgcgc gcaaggtcgc ctgataggcg tcctgcgcag cggagcttgt
     1021 tgacgcggtc tgcgcgggtt atccggcggc gaccgccggg atgccgagca gccggtcctg
     1081 ggcggcgacg aggcgctcca tcacgcgcag gtccttgtcg cgcaggttca gcgccgcctc
     1141 cgcccagatc tcgacgatgc gttcgagctc ggcgagcggc accgggttga cctcgcgcgc
     1201 cgcgcgatag acggcgcgat ggccgttgtg ccggcggccg tgacgctcga tgtagtggcg
     1261 cacggcggcc gtgccctcgc ccggttcggc gaggatctgc acgacgccca tgtcgtgcat
     1321 ctcttcggcc gtgtaggtgg cgccgctgag cagcatcgtc tcggcgcgtg ccgtgccgat
     1381 gcggcgcgcc agcaggctta gggcgcccat cccgggaaac agcccgaaca ggttttcggg
     1441 aaagccgaac ttggcgcctt tctcggcgac gatcacgttg aacgacaaca ccgactcgaa
     1501 gccgccgccg agggcgtcgc cctgcaccag gccgatggtg acgaccggca gctcgaggcc
     1561 ggccatgttg cggtgaagta tgtgcacgca cgccttgccg taacgcacga gcgcgtcgta
     1621 gtcgcgcttg cggatccagc ccgcgaactg gttgaggtcg ccgccgagcg agaacacgcc
     1681 ggggaagcgt gacccgagca ccaggtagcg gaggtccggc tcgcggccgg cgaacatgcg
     1741 cccgatcccg tcctgccagg cgcggaaatc gatcagcatg tcggggttgt agctcgggcg
     1801 cccgcggaag cgcatatgcg tccacaaggt gccggttgcc gcctcccagt cgacctcgag
     1861 ctggcgcagc ccgaacaggg ggcgctccgg cgtggtcagg atggcggcga ggtcgggctg
     1921 gagaaaaccg gggaccgcca gaggcgcgtc gccgggccgg cgaaaggact cgacaagcaa
     1981 cgaagacaca caagcacccg ttaacaactc ggcaacctta gcaattcgta agttgcgctg
     2041 tcgagggccc gcggctgttg cggagggcag cgatcgaact tgtcgttaat cgggaaaaca
     2101 tttgtcagct cagcgggttg atcgcggaaa acagctgcgg cggtcgcttg cggcgtctcg
     2161 caatcgtccc gtgtatcctt aacgccacgg cggctacgca ccgcctcggg gggaaaggct
     2221 cggctgcgcc ggggcttttg actcccgatc tcgaaaaaag cggccggacg cggggccggc
     2281 cgcgtgccgt cagctcttgg cgctggaatt ctggttgcgc ttgtcggatt gcgtgaccgg
     2341 gcccttcgag cccttggagc cgccgcccca ttcctgcgcc ttgtgatgcc gggtcaacgg
     2401 tgagggcgga cgagcgttcc agcgcggccg tgcgcacctc ttccgcgcaa gtcggctgtt
     2461 gccaacttgc gccctaacat tgcggatctc gggagcaccc gagatccact ggagaggtcg
     2521 agtcgccgcg gcagcggcga ccgggtgagg ggagcggcct ctcaggaaaa agcgctcccc
     2581 tcatagatct tacagcggcc tgatctcgac cttgcggaac ttgatcacgc ctttgtcctt
     2641 cacgacgccg ggggcgtatt gcagggcgat cgggccgctc ttgaacttgt cgtccctggc
     2701 gccgtcgacg gtcttctggc cgttgagcac gacggtgaat tgcgggccct tggcctcgat
     2761 ctcgtagacg ttccacttgc cgccggcctt cggcatcgga tcgaccttgg cgacattgac
     2821 gatggcgccg gtgccgtaga tcggctccgg ccgcttgtcg tagatattca cctcgtagga
     2881 gttgtcggcg gtgattttcg caggatcggt gcagcggatg tagatgccgc tgttggcgtc
     2941 ttcgtcggcc cagaactcgg cgcgcaactg gaagtcggtg taggaagttt tcgtgaccag
     3001 gaagccggtg cccttgtcgg cgaccacggc gccatcctcg atgcgccagt tggcgtcgcc
     3061 gaccttgttg aagttgtcga ggctcttgcc gtcgaacagg acggtcgagc cgccgctttg
     3121 cgccgccgcc ggcggcgcgt tccccacgcc cgcgcaggca aagacgagca gcgccgccgc
     3181 ggcggcgtgc attttggaca gacgtttcat gtcgatctcc tcccgcgccg gggcggcgcc
     3241 cgccccggcc gcgcggcaaa cctagcgcga gggaagcgcg cgcggaactc cctctcccgc
     3301 ttgcgggaga gggcagggtg agggagagct atgacaagcc ggtcttgcgc gcgcaggcct
     3361 tatcgctcgc cggagagccg actgttacag cgccctgatc tcgaccttgc ggaacttgat
     3421 cacgcctttt cccttcacga cgctttcgcc gtattgcagg gcgaccggtc cgctcttgag
     3481 ctgctcgtcc ttgaggccct tcacggtagt ctggccgttg agcacgacgg tgatctccgg
     3541 ccccttggcg gtgatctcgt aggtgttcca cttgccgccc accttcatcg gcgactcgat
     3601 cttggcgagg tggacgatgg cgccggtgcc gaaggtcggg tccggacgct tgtcgtagat
     3661 gttcgcctcg tagcaggtct tgtcggtcgg ctcggccgga ttgctgcagc gcatgtagat
     3721 gccgctgttg acgtcgtcgt cggcccagaa ctcgatgcgc agctggtagt cggcatagga
     3781 gtttttcgag accaggaagc ccacgccctt gtcggcgacg acggcgccgt cctcgatgcg
     3841 ccagttggcg tcgccgacct tgttgaagtt gtcgagattc gtgccgtcga acaggacggt
     3901 cgggccgccg ctttgcgccg ccgccggcgg cgcgttccac atacccgcgc aggcaaaagc
     3961 gagcagcgcc gccgcggcgg agtgcgtttt ggacagacgt ttcatggcga tctcctcccg
     4021 cgccggggcg gcgctcgccc cggccgcacg gcaaccctag cgcgagggga gcgcgcgcgg
     4081 aactccctct tctgcaggcg ggagaggtta cgcccgctcg acccgcgccg cgtagcagcc
     4141 gggcgccgcg tagtggatat gcaggtaggc cgcgcgcgga tcggcgaaca gggcggcgat
     4201 ggcgtcctcg acggcgttgc cctcgaccag cttccagccg gccatcatgc cgtcggcgtc
     4261 gtacgcgcgc agcgcgagcg tgcgctcgcg cagctgcgcc ggcacctcgt cgacacggtc
     4321 gaacgtctcc tcgccgcggc gcacatagat ggcgaagcgc atgcggtagg gtgtggccac
     4381 ggcgtggtgc tcgtaattga gcaggatcag ctcgtctccc tcccgcgcgt cggtcaggct
     4441 cacccggcac ggatagccgg gccggcgccc gtcggcgatg cggcgcacgg cgccttgcgc
     4501 cgcaagctcc gcgtcggaga gggcgaacag atgcgaaaaa tgctcggcgg gcagccccgt
     4561 gatgcggaac atgggtcgga ctccatcggc ctgatggcgc gaccttgccg cggccgcgcc
     4621 gcgggcgcga cccggttcct gctcagcggt gcggaccgat atgggagcgc atgcctgtca
     4681 gccgcgcgtc gagatacgaa accgggcgcc aggcgtagta gaggatacgg ccggccccgt
     4741 cggggtagat gacgtagact tgtccgtcgc gctcccacct ttcggcgcgg gcctcgcgca
     4801 tggcgatata
//
LOCUS       DATAIQ010000508         2034 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_119627, whole genome shotgun sequence.
ACCESSION   DATAIQ010000508 DATAIQ010000000
VERSION     DATAIQ010000508.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2034)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2034)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2034
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_119627"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..871)
                     /locus_tag="VHN20_08435"
     CDS             complement(<1..871)
                     /locus_tag="VHN20_08435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007010751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEX2725830.1"
                     /translation="MPLRYDEIGNRLKAFRLGSGLSADEVARRIGISRTALYRFEKGE
                     VAKIETLERLADVLQVSLPTLLGVGIEYIPSVVSYFERMRQIEESAEHIVALAGPISF
                     LLASDSFEEHLEQVLRESIREDVPHRDRALADVEKVMEILHARKATYRRRRPAIVSLI
                     SALEIERFLRAGFVGCSGLPDAVLAERRAIARAEVEHFAAQIENEPIGIQIGIVTDTL
                     PHTGFQIFRLPDRKILTISPFRLGVQPNVRVGVAMITSAPEALTLHEQAVQEMWRTSL
                     RGSAAADYLRTLMS"
     gene            complement(1038..>2034)
                     /locus_tag="VHN20_08440"
     CDS             complement(1038..>2034)
                     /locus_tag="VHN20_08440"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003960 - NADPH:quinone reductase activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0070402 - NADPH binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NADPH:quinone oxidoreductase family protein"
                     /protein_id="HEX2725831.1"
                     /translation="TMRAVVVREFGSLEAAALGEMPDPVPGADQVLINIEATAANFVD
                     LLVIGGKYQFLPPRPFIPGKLPAGTVAAVGSSVQDLKVGDRVLTLAEEGGYAEKVAVP
                     AKQCHRLPPSMSFVEAAAMALVYDTAWFALRDRARLQPGETVLVLGATGGVGLAALQL
                     AKAFGAKVLAGISTAAKADLVLQSGADAVVDLSRSNLHDSLREQVHALTDGRGADVIL
                     DPLGGDIFDAALRALAWRGRLVVIGFAAGRIPTIRANYLLLKNIEVSGLQVSDYRKRK
                     PEQMAECLREVFSLYEAGRIKPAPTATYPLAQVQDALREISDRKVRGRVVVTPQG"
BASE COUNT          341 a          686 c          691 g          316 t
ORIGIN      
        1 agctcatgag cgtgcgcaga taatccgccg cggcggatcc tctcagcgat gtgcgccaca
       61 tttcctggac ggcctgttcg tgcagcgtga gggcctcggg cgccgaggtg atcatcgcga
      121 cgccgacccg cacattgggc tgcacgccta gccggaacgg gctgatcgtc aagatctttc
      181 gatcaggcag gcggaaaatc tggaagccgg tatgcggcag ggtgtcggtc acgatgccga
      241 tctggatgcc gatcggctcg ttctcgatct gcgcggcaaa atgctcgacc tcggcccgcg
      301 cgatcgcccg ccgttccgcc aggaccgcat ccggcagacc tgagcatccg acgaagccgg
      361 ccctgaggaa gcgttcgatc tcgagcgcgg aaatgaggct gacgatcgcg ggcctgcggc
      421 gccggtaggt cgccttgcgg gcgtgcagga tctccatgac cttttcgaca tcggcaagcg
      481 cccggtcccg gtgcggaaca tcctcccgga tgctttcgcg caagacctgc tcgaggtgct
      541 cctcgaagct gtcggaggca agcaggaagg agatcgggcc ggccagcgcc acgatgtgct
      601 cggcgctctc ctcgatctgg cgcatgcgct cgaaatagga gaccaccgag gggatgtatt
      661 cgatgcccac cccgagcagc gtcggcagcg agacctggag cacatcggcc agccgttcga
      721 gggtctcgat cttggcgacc tcgcccttct cgaagcgata gagggcggtg cgagagatgc
      781 cgatgcggcg cgccacctca tcggcgctca gccccgaacc cagccggaag gccttgaggc
      841 gattgccgat ctcgtcatag cgcagcggca cgggtccctc atgcaatgcg tcggcgccct
      901 tgctggatgg gttccatcca accctccgtt cgggaacccg gtcaagtcaa gcaagccggg
      961 cttcacgaga ctgcgaccgg agcctgccgc caaggggctt atccctgagc ggagcggcgg
     1021 atccggcggc gaggcggtca cccctgcggc gtgacgacga cccggccccg caccttgcgg
     1081 tcgctgatct cgcgcaaggc gtcctggacc tgcgccaggg ggtaggttgc ggtcggcgcc
     1141 ggcttgatgc ggccggcctc gtaaagcgag aagacctcgc gcaggcattc cgccatctgc
     1201 tcgggcttgc gcttgcggta gtcgctgacc tgcagcccgc tcacctcgat gttcttgagc
     1261 agaagatagt tggccctgat cgtcggaatg cgcccggctg cgaagccgat gacgacgagc
     1321 cgcccgcgcc aggcaagcgc gcgcagcgcc gcgtcgaaga tgtcgccgcc gaggggatcg
     1381 aggatgacgt cggccccgcg cccgtcggtg agcgcgtgga cctgctcgcg caggctgtcg
     1441 tggaggttgg agcgtgacag gtcgacaacg gcgtccgccc cgctctgcag gacaagatcg
     1501 gccttggcgg cggtcgagat gccggccagc accttggctc cgaaagcctt ggccagctgc
     1561 aacgccgcga gaccgacccc gccggtggcc ccgaggacga gcacggtttc gcccggctgc
     1621 aagcgggccc ggtcgcgaag ggcgaaccac gccgtgtcat agacgagcgc catcgccgcc
     1681 gcctcgacga aggacatcga gggcggcagg cggtggcatt gcttcgctgg caccgcgacc
     1741 ttctcggcgt agccgccctc ctccgccagc gtgagaacgc gatcgcccac cttcaggtct
     1801 tgcacgctgg agccgaccgc cgcgacggtc ccggcaggca gcttgccggg aatgaagggg
     1861 cgcggcggca ggaactggta tttgccgccg atcacgagca gatcgacaaa gttcgcggcg
     1921 gtcgcctcga tgttgatcag cacctggtcg gcaccgggca ccgggtccgg catttctccc
     1981 agggcagccg cctcgagcga cccgaactca cgaaccacaa ccgcacgcat cgtc
//
LOCUS       DATAIQ010000509         1575 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_26448, whole genome shotgun sequence.
ACCESSION   DATAIQ010000509 DATAIQ010000000
VERSION     DATAIQ010000509.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1575)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1575)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1575
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_26448"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..767)
                     /locus_tag="VHN20_08445"
     CDS             complement(<1..767)
                     /locus_tag="VHN20_08445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725832.1"
                     /translation="MSLGAACALFAALAAQQTPEEKPDDRKPKWDVSAPPGPRATIPI
                     DTTTGTWMSLDVSPDGREIVFDLLGDIYTIPISGGAAKALTTGMAWDMQPRFSPDGKR
                     IAFTSDRAGGDNIWVMNRDGARVTQVSKETFRLLNSPVWTPDGQFIAARKHFTAQRSL
                     GAGEVWLYHVSGGAGLQMTKKANDQKDAGEAAFSPDGKFLYYSFDATPGATFDYNKDP
                     NDQIYAIHRLNRENGEIDAVATGPGGAARPTPSPDGKR"
     gene            complement(808..1053)
                     /locus_tag="VHN20_08450"
     CDS             complement(808..1053)
                     /locus_tag="VHN20_08450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725833.1"
                     /translation="MQILALIWGILAMLGMVVAFMPCLGSLNWLNIPFSFVGLIIGIV
                     AAGKPSRSKGAAIAGIVMCAIAMIFGLVRLTVGGGIL"
     gene            complement(1035..1370)
                     /locus_tag="VHN20_08455"
     CDS             complement(1035..1370)
                     /locus_tag="VHN20_08455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725834.1"
                     /translation="MQKRDWAAALSIVWILVSLVIACVLLAPAVFKASAIQHIAPVCT
                     AKARGGACAFCGMTTAFLHISSGRFGDAVDANAGSLWLYTAMAANEILLLLFIRPILQ
                     GVRLCRSSP"
     gene            complement(1393..>1575)
                     /locus_tag="VHN20_08460"
     CDS             complement(1393..>1575)
                     /locus_tag="VHN20_08460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725835.1"
                     /translation="ERDPMNFMLLPLDAGRQRIALEFTTPREVVTGRCLTAFTLLFIL
                     AWLCRRRNVPQHGRAL"
BASE COUNT          301 a          468 c          541 g          265 t
ORIGIN      
        1 cgtttgccgt cgggcgacgg tgtggggcgg gccgcgccgc cgggtcctgt agcgacagcg
       61 tcgatctcgc cgttctcacg attcagccgg tgaatggcat aaatctgatc gttcggatcc
      121 ttgttgtagt cgaacgtggc gccgggcgtg gcatcgaagc tgtagtacag aaacttgccg
      181 tcgggcgaaa aggccgcttc gcccgcgtcc ttctggtcgt tggccttttt ggtcatctgc
      241 agaccggcgc cgccggagac gtgatagagc cagacctcac cggcgccgag ggagcgctgc
      301 gcggtgaagt gcttgcgcgc ggcgatgaac tggccgtcgg gggtccatac agggctgttg
      361 agcagacgga aggtctcctt gctgacctgc gtgacgcgcg ccccgtcgcg gttcatcacc
      421 cagatgttgt cgccgccggc gcgatcgctg gtgaacgcaa tccgcttccc gtcagggctg
      481 aagcgcggtt gcatgtccca ggccatcccg gtggtgagcg ctttggcagc accgcccgag
      541 atgggaatcg tgtagatgtc gccgagcaga tcgaagacga tttcacggcc gtcgggactg
      601 acgtcaaggc tcatccaggt gccggtcgtg gtgtcgatcg gaatggtggc gcgcggcccg
      661 ggaggcgccg aaacgtccca cttcggcttc ctgtcgtccg gcttttcttc gggcgtctgc
      721 tgggccgcca gagcggcaaa caacgcgcac gcggcgccga gggacacgtt tcgcataacg
      781 gaaggccgat tgtagcgcgg ggaaggtcta cagaatgccg ccgccgacgg tcaggcggac
      841 aagtccgaag atcatcgcga ttgcgcacat gacgatcccg gcgatggccg ctcctttact
      901 gcgcgagggc ttaccggcag ccacgatgcc gatgatcaga cccacaaacg agaacggaat
      961 gttcagccag ttgaggctgc ccagacacgg catgaaggcg accaccatcc cgagcatggc
     1021 gaggatgccc cagatcaggg cgaggatctg catagtcgga ctccttgaag gatcgggcga
     1081 atgaacagca ggagcaggat ctcattggcg gccatcgccg tgtacaacca gaggctaccg
     1141 gcgttggcgt caacggcgtc gccgaagcgg ccagaggaga tgtggagaaa cgccgtcgtc
     1201 atgccgcaga aggcgcatgc gccgccgcgc gcttttgccg tacagacggg cgcgatgtgc
     1261 tgaatggcag acgctttgaa aaccgccgga gcgagtagga cacacgcgat gacgaggctt
     1321 acgaggatcc agacgatcga gagtgcggcg gcccagtcgc gcttctgcac aggagtagga
     1381 agcgccatcg tatcagaggg cgcggccgtg ttgcgggacg tttcgccgcc ggcaaagcca
     1441 cgccaggatg aacagcagcg taaacgcggt caggcaacga cccgtaacga cctcgcgagg
     1501 cgtcgtgaac tcaagtgcga tccgctgccg cccggcatcg agcggcagca gcatgaagtt
     1561 catgggatcg cgctc
//
LOCUS       DATAIQ010000510         2318 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_396050, whole genome shotgun sequence.
ACCESSION   DATAIQ010000510 DATAIQ010000000
VERSION     DATAIQ010000510.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2318)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2318)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2318
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_396050"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..780)
                     /locus_tag="VHN20_08465"
     CDS             complement(<1..780)
                     /locus_tag="VHN20_08465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725836.1"
                     /translation="MASRPEKMDDDKLRALIEGEIADSVDFNDSELASHREKALEYYE
                     GTMSDVPPEAGKSSVVSHDIAETIGWMMPGMMRVFLASDRIVIYEPARQGDEPFADQA
                     TDYVNYAVMRECDGYRQLRSAIHDGFLLGNGILKHWWEDKPEYRVETFRGLSDDQFLE
                     LMSAEHVEVLEHTKRGGGLGAEPSGGAAEAGAEGAGDGSLEPDASAAGLAGGGYDAAG
                     AGLQPGGGYAPGALHDCKVKVCVKKGRLRLKALAPEFFLISR"
     gene            complement(890..>2318)
                     /locus_tag="VHN20_08470"
     CDS             complement(890..>2318)
                     /locus_tag="VHN20_08470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725837.1"
                     /translation="RKLASQMNRHKGADIRKLLRPGTAPQGPPAAHAASALPVATEPP
                     AEGWQPRAYQKAVWRYFEGGGKRACCVWHRRAGKDEFCLHLAAIKAHERPATYWHMLP
                     EAAQARKAIWQAINPHTGRRRIDEAFPLPLRSFTRENEMMIGFKSGSTWQVVGSDNFN
                     SLVGSPPAGVVFSEYSLANPSAWSYLRPILAENGGWAAFIYTPRGPNHGQDLYNDARA
                     NKDVWFAERLTVDDTGAIPPATLAQERREMIANHGDRGEALFAQEYYCSFTAAIIGAY
                     YGREMEEAEKAGRIRAGVYDPTIEVHTAWDIGLSDHTAIWFYQQHGLDIRLVDFYCAN
                     GFGLDHYAKVLQSKGHKYGRHYWPHDGANGEWGSGKTRIETANGLGLNPLIVRKMPVE
                     DGINACRKILPRCWFDRDKCAEGVKALQLYQREWDDDRKVFYERPLHDFASHPADAFR
                     TLAVGLQEPSAGAKALPKRDTKWVV"
BASE COUNT          330 a          777 c          790 g          421 t
ORIGIN      
        1 gcggctgata aggaagaact cgggggcgag cgccttgagg cgcaggcggc ccttcttgac
       61 gcagaccttt accttgcagt cgtggagggc tccaggagcg tatccaccgc ccggctgtag
      121 gccagcgcca gccgcgtcat atccgccacc ggcaagcccc gcagccgacg catctggttc
      181 aagacttccg tctccagcgc cttcggcccc agcttctgca gcgcctccgc tcggctccgc
      241 tcccagtccg ccgccgcgct tcgtatgctc aaggacttcg acatgctcgg cgctcatcag
      301 ctccaggaac tgatcatcgc tcaacccgcg gaacgtctca acccgatact cgggcttgtc
      361 ctcccaccaa tgcttgagga tgccgttgcc gagcaggaag ccgtcgtgga tggccgagcg
      421 cagctggcgg tagccgtcgc actcgcgcat caccgcgtag ttcacgtagt cggtcgcctg
      481 gtcggcgaac ggctcgtcgc cttggcgcgc cggctcgtag atgacgatgc ggtcgctggc
      541 caggaacacc cgcatcatgc cgggcatcat ccagccgatc gtctcggcga tgtcgtggct
      601 gacgacgctc gacttgcccg cctcgggcgg cacgtccgac atcgtgccct cgtaatattc
      661 gagggccttc tcgcgatgcg aggcgagctc gctgtcgttg aagtcgacgc tgtccgcgat
      721 ctcgccctcg atgagggcgc gcagcttgtc gtcgtccatc ttttcggggc gggaggccat
      781 cagcgcagcc acgcgaggaa gcggttgacg atcatctctt cggccagttc ctgattatcg
      841 agccgcagca ggtcgagcac cgcgcggcgg atgatttcgt cgaggtccat cagacgaccc
      901 acttcgtgtc tctcttcggc agcgccttgg cgccggcgct cggctcctgc agcccgacgg
      961 cgagcgtgcg gaacgcgtcg gccgggtgcg aggcgaagtc gtgcagcggg cgctcgtaga
     1021 agaccttgcg gtcgtcgtcc cattcgcgct ggtagagctg cagagctttc acgccctcgg
     1081 cgcacttgtc gcggtcgaac cagcagcgcg gcagaatctt gcggcaggcg ttgatgccgt
     1141 cctcgaccgg catcttgcgc acgatgaggg ggttcagccc aaggccgttg gccgtctcga
     1201 tccgggtctt gcccgagccc cactcgccgt tggcgccgtc atgcggccag tagtggcggc
     1261 cgtatttgtg gcccttcgac tgcagcacct tggcgtagtg gtcgaggccg aagccgttgg
     1321 cgcagtagaa atcgaccagc ctgatgtcga ggccatgctg ctggtagaac cagatggcgg
     1381 tgtggtcgga caggccgatg tcccaggccg tgtgcacctc gatggtcggg tcgtagacgc
     1441 cggcgcgaat ccgccccgcc ttctccgcct cctccatctc gcgcccgtaa taggcgccga
     1501 tgatggcggc cgtgaacgag cagtaatatt cctgcgcgaa cagcgcctcg ccgcggtcgc
     1561 cgtggttggc gatcatctcg cggcgctcct gcgccagcgt cgccggcggg atggcgcccg
     1621 tgtcgtcgac ggtcaggcgc tcggcgaacc acacgtcctt gttggcgcgc gcgtcgttgt
     1681 agaggtcctg cccgtggttg ggcccgcgcg gcgtgtagat gaaggccgcc cagccgccgt
     1741 tctcggcgag gatcgggcgc aggtagctcc aggcgctcgg gttggcgagc gagtattccg
     1801 agaacacgac gccggccggc ggggagccga ccagcgagtt gaagttgtcc gagccgacca
     1861 cctgccaggt cgagcccgac ttgaagccga tcatcatctc gttttcgcga gtgaacgacc
     1921 ggagcggcag cgggaacgcc tcgtcgatgc ggcggcgccc ggtgtgcggg ttgatggcct
     1981 gccagatggc cttcctggcc tgcgccgctt cgggcagcat gtgccagtag gtggcgggcc
     2041 gctcgtgcgc cttgatggcg gcgaggtgca ggcagaactc gtccttgccg gcgcggcggt
     2101 gccagacgca gcaggcgcgc ttgccgccgc cctcgaaata gcgccacacc gccttctggt
     2161 aggcgcgcgg ctgccagccc tcggccggcg gctcggttgc caccggcagc gctgacgccg
     2221 catgcgcggc aggcggtcct tgcggcgcgg ttcccgggcg caggagcttg cgaatgtcgg
     2281 cgcccttgtg tcggttcatc tgtgaagcga gcttgcgg
//
LOCUS       DATAIQ010000511         3884 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_441984, whole genome shotgun sequence.
ACCESSION   DATAIQ010000511 DATAIQ010000000
VERSION     DATAIQ010000511.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3884)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3884)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3884
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_441984"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..531)
                     /gene="dgt"
                     /locus_tag="VHN20_08475"
     CDS             complement(<1..531)
                     /gene="dgt"
                     /locus_tag="VHN20_08475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008832 - dGTPase activity [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dNTP triphosphohydrolase"
                     /protein_id="HEX2725838.1"
                     /translation="MRPFGERWRAPYACDPAASRGRIQPEAVSPTRSEFQRDRDRIIH
                     STAFRRLKHKTQVFVYHEGDHYRTRLTHTIEVSQIARALARSLGLDEDLAESLALSHD
                     LGHTPFGHTGEDALDACMAEVGGFDHNAQALRIVTRLEARYAEYDGLNLAWETLEGLV
                     KHNGPLLDRAGEPTARY"
     gene            606..932
                     /gene="erpA"
                     /locus_tag="VHN20_08480"
     CDS             606..932
                     /gene="erpA"
                     /locus_tag="VHN20_08480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012753315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster insertion protein ErpA"
                     /protein_id="HEX2725839.1"
                     /translation="MSDINLTERAARRIKEIMGGEPSGSMLRVSVNGGGCSGFQYAFD
                     IERKRQDDDTVVERDGVTVLIDEVSRQYMQGATIDFVDDLMGQSFKIENPLATASCGC
                     GTSFSI"
     gene            1098..2987
                     /locus_tag="VHN20_08485"
     CDS             1098..2987
                     /locus_tag="VHN20_08485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725840.1"
                     /translation="MSKACSRGLRRACFGLLSASAIAASGIQFSPPSFGPEPAVGSIS
                     LGLASAQIPSFEEGMKRATAGLGQAGAVTLENLAFEVGFTTYRIPKVEISGTNLSQAE
                     LTALLGAASNEPAGSRFSRLSAREAKIPELRIEQSFAGARGAVVYHDVVARDIVNGRI
                     GSLTSARATLEFTAEHLGDLKATAGRTSLDGLDLPHAAAVFAPTAGAGRGEMKTMYGA
                     FAMEGFAMSGPEGVEVRIPRMSGSGVKARPIGQALNTYVTMLARQPDLEKLPPAERSK
                     LIDALAELYEGFDLGAMEMANIEIRNPGAKPPAVGRIGRVAFSGAGTKPADLRAEGIE
                     IVAENGKARVATIAVTGFSYRPTIAGLKSIGDKPVEKIDAADMRRLIPTLGTIRVSGL
                     DLDVPNTKTPGAENIRLGLKDMEITADKPLNGIPTNSRIAFENLTFAIPADAQEDGLK
                     ELLAMGYRALDISLATAASWNEPGGEIVMQEFSVRGSNMGSAALRAVVGNVGKDVFDV
                     DPAVAMVALVGATARNLELRVENNGLFERLLAQQAKKQGKSADDLRREYGVAAAAVIP
                     ALLGNSSNAKSLGQALGRFIAKPGRLTISARARDAAGIGLTEFIAAPDPAAILEKLEI
                     TATVE"
     gene            complement(2993..3712)
                     /locus_tag="VHN20_08490"
                     /pseudo
     CDS             complement(2993..3712)
                     /locus_tag="VHN20_08490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018043505.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase"
BASE COUNT          654 a         1298 c         1321 g          611 t
ORIGIN      
        1 gtagcgggca gtcggctccc cggctcgatc gagaaggggg ccgttgtgct tgacgaggcc
       61 ttcgagggtc tcccaggcga ggttcaggcc gtcgtattcg gcgtaacgcg cctcgagccg
      121 ggtcacgatc cgcagcgcct gggcgttgtg gtcgaagccg ccgacctccg ccatgcacgc
      181 atcgagcgcg tcctccccgg tatggccgaa cggcgtgtgg ccgaggtcgt gcgacagggc
      241 cagcgactcg gcgaggtcct cgtcgaggcc cagcgacctg gccagggcgc gggcgatctg
      301 gctgacctcg atggtatggg tcagccgggt gcggtagtga tcaccctcgt ggtagacgaa
      361 gacctgggtc ttgtgcttca ggcgccggaa agctgtggaa tggatgatcc ggtcccggtc
      421 gcgctggaac tcgctgcgcg tcggcgagac cgcctccggt tggatccggc cgcggctggc
      481 tgccggatca caggcgtaag gggctctcca tcgctcgccg aaaggccgca cgcgctgctc
      541 cggttgaagc ggggacgcgc cggccttacc tgtaacgaga aggacttggc aagttgaacg
      601 tgccgatgag cgacatcaat ctgaccgaac gcgccgcgcg ccgcatcaag gagatcatgg
      661 ggggcgagcc ctccgggtcg atgctgcggg tcagcgtcaa tggcggcggc tgctccggct
      721 tccagtatgc gttcgacatc gaacgcaagc ggcaggacga cgacaccgtc gtcgaacgtg
      781 acggcgtgac ggttctgatc gacgaggtgt cgcggcaata catgcaaggc gccacgatcg
      841 atttcgtcga cgacctcatg gggcagtcgt tcaagatcga aaacccgctc gccaccgcct
      901 cctgcggctg cggcacgtcc ttctccatct gacggcgacg gcgaacagcg cgtagctgat
      961 aaaggcgagg ttcccccgaa tcacatcggc cccccgttcg ccattggcca ttcgcctgct
     1021 ggcccctctc ccgcaagaac cgcgtgcacg cggcggtggc gtgtcgtaac gtgcccccgt
     1081 cacgagagag agtctccatg tcgaaggcat gttcgcgcgg cttgcgccgc gcctgtttcg
     1141 gtctgctttc cgcgtccgcg atcgccgcca gcggcattca attctcgccg ccgtcattcg
     1201 gcccggagcc tgcagtcggc tcgatctcgc tcggtctcgc gtcggctcaa atcccgtcgt
     1261 tcgaagaggg catgaagcgc gcgacggccg ggctcggcca ggcgggcgcc gtgactctcg
     1321 agaatctcgc cttcgaggtc ggcttcacga cctaccggat cccgaaggtc gagatatccg
     1381 ggaccaatct gtcccaggcc gagctgaccg ccctcctggg cgcggcttcg aatgagcccg
     1441 cgggctcccg cttcagccgg ctgtcggccc gcgaggcgaa aatccccgag ctcaggatcg
     1501 agcagtcgtt tgcaggggct cgcggggcgg tcgtctacca cgacgtggtc gcgcgcgaca
     1561 tcgtcaatgg ccgcatcgga tcgctcacga gcgcacgggc gacgctggaa ttcacggccg
     1621 agcacctcgg cgacctcaag gcaacggccg ggcggacgag cctcgacgga ctcgatctgc
     1681 cgcacgcggc cgccgtgttc gccccgacgg ctggcgcggg acggggcgag atgaagacga
     1741 tgtacggcgc gttcgccatg gaagggttcg ccatgagcgg acccgaaggc gtcgaggtgc
     1801 gcattccccg catgtcgggc agcggggtca aggcacggcc tatcgggcag gcgttgaaca
     1861 cgtacgtgac catgctggcc cgccagccgg acctcgagaa gctgccgcct gccgagcgca
     1921 gcaagttgat cgatgcgctc gccgaactgt acgaaggctt cgatctcggc gcgatggaaa
     1981 tggcgaatat cgagatccgc aacccgggcg caaagccgcc ggcggtcggc cgcatcggcc
     2041 gggtggcctt ctcgggagcc ggcacgaagc ccgctgacct gcgcgccgaa ggcatcgaga
     2101 tcgtcgccga gaacggcaag gcgcgcgtcg ccaccatcgc cgtcaccggg ttttcatatc
     2161 ggccgacgat cgcgggcctg aaaagcatcg gcgacaaacc ggttgagaag atcgacgccg
     2221 ccgacatgcg ccgactcatc ccgacccttg ggacgatccg cgtctccggt ctcgatctcg
     2281 acgtgccgaa caccaagacg ccgggcgccg agaatatccg gctcgggctc aaggacatgg
     2341 agatcaccgc cgacaagccg ctcaacggca tcccgaccaa ctcgcgcatc gcgttcgaga
     2401 acctgacctt tgcgatccct gccgatgccc aggaggacgg gctgaaggaa ttgcttgcca
     2461 tgggctaccg ggctctcgac atctcgctgg cgacggcggc gagctggaac gagccggggg
     2521 gcgagatcgt catgcaagag ttttcggtgc gcggcagcaa catgggcagc gccgccctgc
     2581 gcgcggtggt cggcaatgtc ggcaaggacg tgttcgacgt cgaccctgcc gtcgccatgg
     2641 tggcgctggt cggggcgacg gcgcgcaacc tcgagctccg cgtcgaaaat aacggcctct
     2701 tcgaacgcct gctcgcgcag caggcgaaga agcaggggaa atcggctgac gatctgcgcc
     2761 gcgaatacgg cgtggccgct gccgcggtga tcccggccct gctcggcaac tcgtcgaacg
     2821 ccaagtcgct cggacaggcg ctcggccgct tcatcgccaa gcccggccgc ctcaccatct
     2881 cggcgcgcgc cagggatgcc gccggcatcg gcctcaccga gttcatcgcc gcccccgatc
     2941 cggcggccat cctcgagaag cttgagatca ccgcaacggt ggagtgaggg cgtcagatct
     3001 cctgggcctc gacgacggcg acggcggtca ggttgacgat gccgcgcgcc gtcaccgatg
     3061 gcgtcagcac gtgcgcgggc ttggccggcc cgatcaggat cgggccgacg ggaagcgcat
     3121 cggccacgac cttgatgaac tggaacgcga tgttggccgc gtcgaggttc ggcatgatca
     3181 ggacgttcgc ctcgcccttg agtcgcgagc ccggatagac ccgctcacgg atcagctccg
     3241 acagcgccgt atcggcggcc atctcgccgt cgacctcgag atccggcgcc cgctcgcgca
     3301 ggagctccag cgcctcgcgc atcttgcagg ccgaaggcgt atcgcgcgcg ccgaaatcgg
     3361 aatgcgaaag aagcgcgatc ttgggcgcga tgccgaagcg ctgcacgtga ccggcgcagg
     3421 cgatcgtcat gtcggcgatc gcgctggcgc tcggatcggc ctgcacatgc gtgtcggcga
     3481 ggaaatagct gcccttcgcc gtgatgatca ggctcagggc ggccagctcg cgcgcgcccg
     3541 gcgccagccc gatgatgtcc ttgatatgct ggagctttgc ctcgaagcgg ccttccagcc
     3601 cgcagatcag cgcgtcggcg tcgccgcgcc tgaccgcgag cgccccgatg acggtgttgt
     3661 cggtgcgcac gagcgttcgc gccgcatccg gcgtgatccc tttgcggccc gcgcaaaata
     3721 gtgcgaccgg cggcagcgcg gcgaggccgg gtcggaccga tcccggtcca ccagatttca
     3781 ccaaaatact gagaccggcg gtagtccgcc gacgaagttt cgggacgatc gggtccacca
     3841 gatttcagca aaatactgag accggcggta gtccgccgac gacg
//
LOCUS       DATAIQ010000512         3022 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_119821, whole genome shotgun sequence.
ACCESSION   DATAIQ010000512 DATAIQ010000000
VERSION     DATAIQ010000512.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3022)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3022)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3022
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_119821"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1347)
                     /locus_tag="VHN20_08495"
     CDS             complement(<1..1347)
                     /locus_tag="VHN20_08495"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metalloprotease"
                     /protein_id="HEX2725841.1"
                     /translation="MFWPRFVLLVPCLSRPGRRKLAALVAAAATALGPAAAQTSSRKP
                     SLVRDAETEQLLRDYTLPIFRAAGINAGATKIFLVNERTFNAFVANGQKIFINVGALM
                     DAETPNEVIGVLAHETGHIQGGHLARLRQQVANAKVLSVIGMLASVGAVAGAAQSGGR
                     VGSSGAAGMGTIAGSQELVMRNLLAYQRSEEQAADQAAVRYLSATGQSPAGMLKTFRK
                     FADSGFFRSTSVDPYLLSHPLPNERIGQLENLAKQSPHFSKKDAPALQARHDLMRAKL
                     FGFTERPDTVLRRYPMSNTSAPARYARAVLAYKGGRLAESLALMDGLLREQPNNPYFW
                     ELKGQALLESGRAREALDPLRRAVALAPGAVPIRAMLGHALVATGDPRLLDQAIKELS
                     NATIREPEGGEAYQHLATAYGRKGNIGMAELASAQAFFNGGDLKNAQTQASRAMEKL"
     gene            1441..2619
                     /locus_tag="VHN20_08500"
     CDS             1441..2619
                     /locus_tag="VHN20_08500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018044712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX2725842.1"
                     /translation="MKATADLSLPSLARRTEGVAPFLAMDVLAAAAAKERRGDSVIHM
                     EVGQPSAPAPRPARDAAKAALENGRIGYTEALGIGALRERIARHYHDAYGVTLAPERV
                     VVTTGSSAGFVLTFLSLFDPGQRVAITAPGYPAYRNILEATGLVPATIALRKTDGWMM
                     TAEAVTQAHAESRLHGVLAMSPANPSGTMIKLAALRELGATCRALGLWFISDEIYHGL
                     TYGEPAATALAFDDDAVVINSFSKYYCMTGWRIGWIVVPERIVRPLERLAQNLYISPP
                     YLSQVAALAAFDAVEELEAVKAGYARNRAMLLNELPRLGITDMHPVDGAFYIYADVAR
                     FTNDAVAFCKRMLDEAGVATTPGLDFDPVEGAHHLRLSFAGSENDCREAMRRLATWLG
                     "
BASE COUNT          461 a         1025 c         1032 g          504 t
ORIGIN      
        1 cagcttctcc atggcgcggc ttgcctgcgt ctgggcattc ttcaggtcgc cgccgttgaa
       61 gaatgcctga gccgatgcga gttccgccat gccgatattg cccttgcgtc catatgccgt
      121 cgccagatgc tggtaggctt cgccaccttc cggctcgcgg atcgtggcgt tcgacagttc
      181 cttgatcgcc tgatcgagca gcctgggatc gccggtggca acgagcgcgt ggccgagcat
      241 ggcgcggatc ggcaccgcgc cgggggcgag ggcgaccgcg cgccgcagcg ggtcgagcgc
      301 ctcccgggcg cggccgctct cgagaagcgc ctggcccttc agctcccaga aatagggatt
      361 gttcggctgc tcgcgcagca ggccgtccat gagggccagc gactccgcca gccgcccgcc
      421 cttgtaggcg aggaccgcgc gggcatagcg cgccggcgcg gacgtgttgc tcatcggata
      481 gcggcgcagg acggtgtcgg gccgctcggt gaagccgaac agcttggcgc gcatcaggtc
      541 gtggcgcgct tgcagggccg gtgcatcctt cttgctgaaa tgcgggcttt gcttggcgag
      601 gttctcgagc tgcccgatgc gctcgttcgg caacggatgg ctgagcagat acgggtcgac
      661 cgaggtcgag cggaaaaatc cggaatcggc gaacttgcga aaggttttga gcatgccggc
      721 cggcgattgg cccgttgcgc tcagatagcg cacggcagcc tggtcggcgg cctgctcctc
      781 cgagcgctgg taggcgagca ggttgcgcat cacgagctcc tggctgcccg caatcgtgcc
      841 catgccggcg gcgccgctgc tgccgacgcg gccgcccgac tgcgcggcgc ccgccacggc
      901 gccgacactc gccagcatgc cgatgaccga gaggaccttg gcgttggcaa cctgctggcg
      961 caaccgggcc aagtgcccgc cctggatgtg gccggtctcg tgcgcaagaa cgccgatcac
     1021 ctcgttcggc gtctcggcat ccatcagcgc gccgacattg atgaagatct tctggccgtt
     1081 ggcgacgaaa gcgttgaacg tgcgctcgtt gacgagaaag atcttggtcg cgcccgcatt
     1141 gatccctgcg gcccggaaga tcggcagcgt atagtcacgc agcagctgct cggtttcagc
     1201 gtcgcgcacg aggctgggct tgcggctcga ggtttgcgcg gccgccgggc cgagcgccgt
     1261 cgccgccgcc gcgaccagcg ccgccagctt gcgccgtccg gggcgagaca gacacgggac
     1321 gaggagcacg aatcggggcc agaacatcat ctcggcgggt gacctacgaa gcgcggttga
     1381 acgggtcaat cgcggcaggt ggcggttgag catcgcatgg caagcggcta gggcatcctg
     1441 atgaaagcga ccgccgacct gagccttccc agcctcgccc gccggaccga gggggtggcc
     1501 cccttcctcg caatggatgt cttggctgcg gccgcggcaa aagaaaggcg aggggacagc
     1561 gtcatccata tggaggtcgg gcagccctcc gcgccggcgc cgcgcccggc ccgcgacgcc
     1621 gcgaaggcgg cgcttgaaaa cggccgcatc ggctacaccg aggcgcttgg catcggggcg
     1681 ctgcgcgaac gcatcgcgcg ccattaccac gatgcctatg gggtcacgct cgcgccggag
     1741 cgggtcgtcg tgacgaccgg atcctcagca ggcttcgtgc tgaccttcct gtccctcttc
     1801 gatccgggcc agcgcgtcgc gatcaccgca cccggctacc ccgcctaccg caacatcctc
     1861 gaggcgaccg gcctggtgcc ggcgaccatc gcgttgcgca agacggatgg ctggatgatg
     1921 accgcggagg cggtgacgca agcgcatgcc gagagtcgat tgcacggcgt cctcgccatg
     1981 agcccggcca atccttccgg aacgatgatc aagctggcgg ccctgcgcga gctcggcgcg
     2041 acctgccgcg ccctcggcct ctggttcatc tcggacgaga tctatcacgg cctcacctac
     2101 ggcgagcccg ccgccacggc gctcgccttc gacgacgacg ccgtcgtgat caacagcttc
     2161 tcgaaatact actgcatgac gggttggcgc atcggctgga ttgtggtgcc ggagcgcatc
     2221 gtgcggccgc tcgagcggct cgcgcagaac ctctacatct cgccgcccta tctttcgcaa
     2281 gttgcggcat tggcggcgtt cgacgcggtc gaggagctgg aagcggtcaa ggcgggctat
     2341 gcccgcaatc gcgccatgct gctgaacgag ctgccgcgcc tcggcatcac cgacatgcat
     2401 ccggtcgacg gcgccttcta catctatgcc gacgtcgcgc gcttcaccaa cgacgccgtg
     2461 gcgttctgca aacgcatgct cgacgaggcg ggcgtcgcga cgacgccggg tctcgatttc
     2521 gatcccgtcg agggggcgca ccacctgcgc ctttcatttg ccgggtcgga aaacgattgt
     2581 cgcgaggcga tgcggcgcct cgcgacgtgg ctgggttgat gactcatgcc cggccttaag
     2641 ccggccatcc gatcggtctc aagcctcgcg ccgggatggc cgtagcccgc cccatgacaa
     2701 ggcggcagag cgctcaactc ccgctgattg cggtcttggc gcgcgaccac cagccggccc
     2761 gctttggccg atccgggtcg ggcggagtga gaaccacggc gacgggttcc ggcgccggct
     2821 cggccgtcgg cgcttcgggc tgcgtcgcag gttgcgcgga ctccgccggt tgctcaccgt
     2881 tgaacgtgcc ggactgggcg taagccggct cggaaggtac ctcgatcgga cccggcgctg
     2941 gggtcccgcc tgaactctcc tgctggccaa tgctctcttg ggcgaagctc gcttggccaa
     3001 agctcgcttg gccaaaactc tc
//
LOCUS       DATAIQ010000513         9423 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_334941, whole genome shotgun sequence.
ACCESSION   DATAIQ010000513 DATAIQ010000000
VERSION     DATAIQ010000513.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 9423)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9423)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9423
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_334941"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..208)
                     /locus_tag="VHN20_08505"
     CDS             complement(<1..208)
                     /locus_tag="VHN20_08505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018387361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725843.1"
                     /translation="MQVADLMQKKGTRLIMVRMNETVDMAIRLLRRENIGAVIVNDVV
                     QRQDRKGLSNLSRSLERSSLLPSCT"
     gene            complement(403..1614)
                     /locus_tag="VHN20_08510"
     CDS             complement(403..1614)
                     /locus_tag="VHN20_08510"
                     /EC_number="4.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011426912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_function: GO:0016849 - phosphorus-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0032555 - purine ribonucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEX2725844.1"
                     /translation="MNDSDIDRIATWLIERGLAGASETELLHGFCAACRQAGLELSRG
                     NMLIDTLHPVHEGRAFRWHIDGAQSPVVEYGRTNEGGAQAESWQRSPYHALVTSGENE
                     LRRRLGEGPPDFPMLVEMRNEGETDYIAFVQRFARDSVIGEMDAVYSSWSTRRGGGFD
                     HRELAALRRLVPLLALAAKCASLARIAQTLVEVYLGRDAGRRVLDGRISRGVAERINA
                     VLWFSDLRSYTSISDRVAPDEIIPMLNDYADAVVSAVHAAGGDVLKLVADGVVAIFKA
                     DDPARACRCALEAERNLRARLVALNERRAGEGRPVTSVYLGLHIGDVFYGNIGSEERL
                     DFTVIGPAVNEVSRIASMCASVDRDVVLSADFAAAAAPAERGRLVSVGRFALRGVARA
                     QELFTIDPAAA"
     gene            complement(1685..4861)
                     /locus_tag="VHN20_08515"
     CDS             complement(1685..4861)
                     /locus_tag="VHN20_08515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008125008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0042908 - xenobiotic transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit"
                     /protein_id="HEX2725845.1"
                     /translation="MRFAHFFVDRPIFASVLSIVLLLVGGIAYTELPVAQYPDIAPPT
                     IVVRASYPGANAETVAATVATPLEQEVNGVENMLYMSSYSTGDGAMQLTITFRLGTDL
                     DTAQVLVQNRVAIATPRLPDDVRRLGVTTRKSSPDLMMVVHMLSPDDSYDQLYVSNYA
                     RNNVRDVLLRLDGVGDLNIFGERQYSLRIWLDPEKLATYGLTSGDVVRAVQEQNVQVS
                     GGALGAEPVASDNAFQVTITTQGRFDDPRQFRQAIVRATPDGRLIRVQDVARVELGAQ
                     DYVTNSYLSGRPAVALAIFQRPGTNALAAAGQIIRTMDLLKQDFPPGIDYTIVYNPTE
                     FIAESVKAVYHTLFEAIALVVLVVIVFLQSWRTAVIPIVAIPVSLIGSFAVMAAFGFS
                     LNTLTLFGMVLAIGIVVDDAIVVVENVERNIALGLSPREAAHKTMDEVGSAVIAIALV
                     LAAVFIPTAFIPGITGQFYRQFALTIAVSTIISAANSLTLSPALAALLLKPHTHARPR
                     NPLVRLGDWMARRFNRGFDATAHGYAWSVDVLGRRKLLVLPVYAALLGATVWIVQKVP
                     RGFIPTLDQGYAIVVIQLPDGSALSRTDAVVQRASKIMTDTPGVQDAVAFAGFSGATF
                     TNATNAAAIFARFRPFDERVAQGLPADVVIRQLFGRLQQIEEAFIIAIPPPPVRGLGN
                     AGGFRLQVQERTGAEVGRVLASTVELLGRARQNSNLAGVFTTYSASSPQIYLEIDRQK
                     ARLLNVPIGNIFETLQVNLGTAYVNDFNAFGRVYQVRAQADLRFRVEQRDLNRLRVRS
                     ATGALVPLGTIVEIRQVAGPDLVQRYNMYTSVPLQGNAAAGVSSGQALDAMEQLARAT
                     LPQGMSFEWTELAYQERATGSTAVFIFALSVLFVFLVLSAQYESWTLPLAIVLIVPMA
                     VLSALAGVMLRDMDNNILTQIGLVVLVGLAAKNAILIVEFARQAEEEGKGVVEAVVEA
                     ARLRLRPILMTAFAFILGVVPLVIATGPGAEMRQALGTAVFFGMLGVTFFGLFFTPVF
                     YVAIRKAVLRFGYWRRRARPLRDTAPAE"
     gene            complement(4883..5974)
                     /locus_tag="VHN20_08520"
     CDS             complement(4883..5974)
                     /locus_tag="VHN20_08520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017961787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX2725846.1"
                     /translation="MPPAHAQGAAGPPSVSVAKPVVKDIMEWDEFIGRFEAVDQVDIR
                     ARVSGYIDKIHFKDGTIVKTGDPLFTIDQRPYRLAVDQADTAVISAQSRLDFATSDLQ
                     RAETLSRSGNITEQLLDQRRQNFQTARAELDRSRAALAQARLDLEFTEIKAPIAGRVS
                     RRLVSMGNLVNANETVLTNIVSLDPIHFYFDVDERSYLGYSRMGDAGTRPSGRTNPNQ
                     VFVATTDEREPKRVGHMDFVDNRLDPATGTMRGRAVFDNKDVWLTPGLFGRIRIMGSG
                     LYKGILIPDEAIASDQDRRVVYVVNPDNSVAQKAVRPGPRIDGYRVVREGLTGDETIV
                     VNGLMRVRAAGKVTPQPTTLPPVRERNGS"
     gene            6367..9237
                     /locus_tag="VHN20_08525"
     CDS             6367..9237
                     /locus_tag="VHN20_08525"
                     /inference="COORDINATES: protein motif:HMM:NF012698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HEX2725847.1"
                     /translation="MADQTAPGVGPAISFGPFRLLPSQQLLLEGGKPVRLGSRALEIL
                     LALVERAGDLVTKEELVGRVWPDTFVEEGNLRVHVAALRRALGDGHAGTRYVANIPGR
                     GYRFVAPVSLSAPTPSALAHAEADAAHNLPAALTRMVGRSDVVDGLLTQVPQKRFVTL
                     VGPGGIGKTTLALAVAHNLTGAYRDGVRFVDLAPVTDPQLAVSALASALGVAIRSDNP
                     RPGLASFLAGKNMLIVLDSCEHLISAAASLAEDVFQNAPATHLLATSREPLRAEGEHI
                     MRLSGLAVPAGSGGLTAVDALAFPAVQLFVERATASTDSFELTDANAQTVVDICRRLD
                     GIALAIEMAAGRLDTLGLAEVASLLDDRFRLLTRGRRTALPRHQTLRATLDWSHSLLP
                     EFEQLMLRRLGVFAGWFTTQAARAVLSSHKMNLADVVDGVADLAGKSLVVADVGGPTT
                     FYRLFDTTRAYALEKLADAGEADAVSRCHAHYYCELFERAETEWETRPTADWLAEYRH
                     MLDNLRAALDWAFSPKGAPSIGVPLTVAAAPLWLELSLMEECRTRMEQALAALGEASQ
                     DEQRKMQLYTALAWSQMYTSGSSRQTGAVWANALQFAEALDDGDYQLRSLWGLWADSI
                     NKGRFRDALGLAKRFSTVAATTGEDAELHIADRMIGASLHFLGDQAGARRHIERMLAS
                     YERPRHRSHLVRFQFDQRITARITLARVLWLQGAADQAIDTVRSTVDSAVALDHMLSL
                     CNVLAQAACPVALLAGDLPAAERFTTLLLELTTREALDVWHAYGICFQGQLRVRRGDP
                     EGGLRLLGAGVEKLRAATFVQYLTSFLGSLAKGCVRAGRIAEARAAIDEALGRCELSD
                     ERWCIAELLRIRGEIALREHAGQPAAAEEHFLHSLDWSRRQEALAWELKTTTSLARMR
                     KDNGRAREGRELLAPIYARFTEGFATADLASARTLLDELAHA"
BASE COUNT         1611 a         3153 c         3127 g         1532 t
ORIGIN      
        1 atgtgcaaga cggcaagagg ctcgacctct ccagcgaacg ggagaggttg gagagcccct
       61 tgcgatcctg ccgctgaacg acgtcgttga cgatcaccgc gccgatattc tcccgcctca
      121 ggagacggat cgccatgtcg accgtctcgt tcatccgtac catgatcagg cgcgttccct
      181 ttttttgcat caggtctgca acttgcatgg cgtccctccc gggtcgttca gggtcgttgc
      241 cgcctcggcg atgcggccgg acggctgcaa gacctccctg ccgcgtcgac tagaggccgt
      301 gcgaaatcga cggccagaca gcatcacaaa ggcgaggcca tcatagaccg cgcgagccag
      361 ttcgaccaga acgagcgacg ggctccggat aacgcaggcc gttcaggccg ccgccggatc
      421 gatcgtgaac agttcctggg cgcgtgccac cccccgcaag gcgaagcggc ccacggacac
      481 gagccggccg cgctccgcag gcgccgccgc cgcggcgaag tcggcggaca aaacaacgtc
      541 gcggtcgacc gacgcgcaca tcgacgcgat gcggctcacc tcgttcacgg ccgggccgat
      601 caccgtgaaa tcgaggcgct cctcgctgcc gatatttccg tagaagacgt cgccgatatg
      661 caggccgaga tacaccgagg tgaccggacg tccctccccg gccctgcgct cgttcagggc
      721 gacgagccgg gcgcgcaagt tccgctcggc ctcgagggcg catcggcagg cccgcgccgg
      781 atcatcagcc ttgaagatcg ccacgacccc atcagccacg agcttgagca cgtcgccgcc
      841 ggccgcgtgc accgccgaga cgaccgcgtc ggcgtaatcg ttgagcatgg ggatgatctc
      901 gtcaggtgcc acccgatcgc tgatgctcgt atagctgcgc aggtccgaga accacagcac
      961 ggcgttgatg cgctcggcga cgccgcgcga gatccgcccg tcgaggacgc gccgccctgc
     1021 gtcgcggccc agatagacct cgaccagggt ctgcgcaatg cgggccagcg acgcgcactt
     1081 tgccgcgaga gccagcaagg gcacgagtcg gcgcaaggcg gcgagttccc ggtgatcgaa
     1141 gccgccgccg cggcgggtcg accagctgga atagacagcg tccatttcgc cgataacgct
     1201 gtcgcgtgcg aagcgctgga cgaaggcaat gtagtccgtc tccccctcgt tccgcatctc
     1261 gacgagcatc ggaaagtcgg gcggcccttc gccaagccgg cggcgaagct cgttttctcc
     1321 ggacgtgacc agcgcgtgat aggggctgcg ttgccagctt tcggcctgcg ccccgccctc
     1381 attggtgcgg ccgtattcga ccaccgggga ctgcgcgccg tcgatgtgcc agcggaacgc
     1441 ccggccttca tggaccggat gcagtgtgtc gatcagcatg ttcccgcgtg acagctcgag
     1501 cccggcctgt cggcacgcgg cgcaaaatcc gtgcaacagc tcggtctcgg aggcgccggc
     1561 aagcccgcgt tcgatcagcc acgtcgcaat gcggtcgatg tcactgtcgt tcacgtgtcc
     1621 cccgatgcgc cctcaacccc tgcgtcagcg cacccgcgca agatagcgcg ctcccccgca
     1681 gccgtcattc ggccggcgcc gtgtccctca ggggccgtgc gcgtcgacgc cagtagccga
     1741 agcgcagcac ggcctttcgg atggcaacgt aaaacaccgg ggtgaagaac aggccgaaga
     1801 acgtcacgcc gagcatgccg aagaacacgg cggtgccgag agcctggcgc atctcggcac
     1861 ccggccctgt ggcgatcaca agcggcacga cgccgaggat gaaggcgaaa gccgtcatga
     1921 gaatcgggcg caggcgcaac cgcgccgcct cgaccaccgc ttcgaccacc cccttcccct
     1981 cctcttccgc ctgtctggcg aactcgacga tgaggatggc gttcttggcc gcgaggccca
     2041 ccagcaccac gagtccgatc tgggtgagga tgttgttgtc catgtcccgc agcatgacgc
     2101 cggccagggc cgaaagcacc gccattggca cgatcaggac gatggcgagc ggcagcgtcc
     2161 agctctcgta ttgtgccgac aggaccagga acacgaacag caccgacaaa gcgaagatga
     2221 acacggccgt gctgccggtc gcccgctcct ggtaggccag ctcggtccat tcgaagctca
     2281 tgccctgcgg cagggtggcc cgcgcgagct gttccatggc gtcgagcgcc tgtccggacg
     2341 agacgccggc agcggcgtta ccctgcaagg gcaccgaggt gtacatgttg tagcgctgga
     2401 cgaggtcggg gccggccact tgccggatct cgacgatcgt tccaagcggc acgagcgccc
     2461 cggtcgccga cctgacccgc agtcggttga ggtcgcgctg ctcgacgcgg aaacgcaggt
     2521 cggcctgcgc ccggacttgg tagacgcggc cgaaggcatt gaaatcgttg acgtaagcgg
     2581 tgcccaaatt gacctggagc gtctcgaaga tgttgccgat ggggacgttc aggaggcgcg
     2641 ccttttggcg gtcgatctcg agatagatct gcggcgagct ggccgagtag gtggtgaaca
     2701 cgccggcaag gttcgagttc tggcgggcgc ggcccaacag ctcgacggtc gaggcgagca
     2761 cccgcccgac ctcggcgccg gtgcgttcct ggacctgcag gcggaagccc ccggcattgc
     2821 ccagaccgcg caccggcggc ggcgggatgg cgatgatgaa ggcctcttcg atctgctgca
     2881 ggcggccgaa cagctggcgg atgacaacat ccgccggcag cccctgcgcg acccgctcgt
     2941 cgaacgggcg gaagcgcgcg aaaatcgcgg cggcgttggt ggcgttcgtg aaggtcgctc
     3001 ccgagaaccc cgcgaacgcc accgcgtcct gcacgccggg cgtgtcggtc atgatcttcg
     3061 atgcgcgctg cacgaccgcg tcggtgcgcg acagcgccga cccgtctggc agctggatga
     3121 cgacgatggc atagccctgg tccagcgtcg ggatgaagcc ccgcggcacc ttttgcacga
     3181 tccacaccgt ggcgccgagc agggccgcat agaccggcag caccagcagc ttgcggcgcc
     3241 cgagcacgtc gactgaccag gcgtagccgt gcgcggtcgc gtcgaagccg cggttgaacc
     3301 gccgggccat ccagtccccg aggcggacca gcggattgcg cggccgcgca tgcgtgtgcg
     3361 gcttcaagag gagcgccgcc aaggctggcg acagggtcag cgaattcgca gccgagatga
     3421 tcgtcgagac cgcgatggtc agggcgaatt gccgatagaa ctggccggtg atcccgggaa
     3481 tgaaggcggt cggaatgaac accgccgcaa gcaccagcgc gatcgcgatc accgccgagc
     3541 cgacctcgtc catggtcttg tgcgcggcct cgcgcgggct gaggcccagg gcgatgttgc
     3601 gctccacgtt ctcgaccacg acgatggcgt cgtcgacgac gatgccaatg gccaggacca
     3661 tgccgaacag cgtcagcgtg ttgagcgaga agccaaacgc ggccatcacc gcgaagctgc
     3721 cgatcagcga caccggaatg gcgacgatcg gaatgacggc cgtgcgccaa ctctgcagga
     3781 agacgatgac cacgagcacg acgagcgcga tcgcctcgaa gagcgtgtgg tagacggcct
     3841 tgacgctctc ggcgatgaac tcggtcggat tgtagacgat cgtgtaatcg atccccggcg
     3901 ggaaatcctg cttgagcagg tccatggtgc ggatgatctg gccggctgcg gcgagggcgt
     3961 tggttcccgg gcgctgaaag atcgcaaggg ccacggccgg gcgcccgctc aaatacgagt
     4021 tggtgacgta gtcctgggcg cccagctcga cgcgggccac gtcctgcacc cggatcaagc
     4081 gcccatcggg agtggcgcgc acgatcgcct gccggaactg gcgcgggtcg tcgaagcgcc
     4141 cctgggtcgt gatcgtcacc tggaacgcgt tgtcggacgc tacaggctcg gccccaagcg
     4201 cgccgcccga gacctgaacg ttctgctcct ggaccgcacg cacgacgtca cccgaggtca
     4261 gaccgtaggt ggcgagcttt tccgggtcga gccagatgcg cagggaatac tggcgctcgc
     4321 cgaagatgtt caggtcgccg accccgtcga ggcgcagcag cacgtcgcgc acgttgttgc
     4381 gcgcatagtt cgacacgtag agctggtcgt aggaatcgtc cggcgagagc atgtgcacga
     4441 ccatcatcag gtcgggcgag ctcttgcggg tggtcacgcc gagccggcgc acgtcgtcgg
     4501 gcaggcgcgg cgtggcgatc gcgacccggt tctggacgag cacctgggcg gtatcgaggt
     4561 ccgtgccgag gcggaacgtg atggtcagct gcatcgcgcc gtcgccggtc gagtacgacg
     4621 acatgtagag catgttctcg acgccgttga cctcctgctc gaggggtgtc gcgaccgtcg
     4681 cggcgacggt ctccgcgttg gcgcctgggt aactggcgcg cacgacgatg gtgggcggcg
     4741 cgatgtctgg atattgcgcg accggcagct cggtataggc gatgccgccg acgagcagca
     4801 gcacgatcga gaggacgctc gcgaagattg gccggtcgac gaagaaatgc gcgaaccgca
     4861 tgggcgtgct ccgccgttcc gatcagctgc cgttgcgctc gcggaccggc ggcaacgtgg
     4921 tcggctgggg ggtaaccttg ccggcagcgc gcacgcgcat gaggccgttg accacgatcg
     4981 tctcgtcgcc ggtgaggccc tcgcgcacga ctcggtagcc gtcgatgcgc ggacccggcc
     5041 gcaccgcctt ctgggccacc gaattgtccg ggttcacgac gtagacgacg cgccgatcct
     5101 gatcgctggc gatggcctcg tccgggatga ggattccctt gtagaggccc gatcccatga
     5161 tgcggatgcg cccgaacagg ccgggcgtga gccacacgtc cttgttgtcg aagaccgcgc
     5221 ggccgcgcat cgtccccgtc gccggatcca ggcggttgtc gacaaagtcc atgtggccca
     5281 cgcgcttcgg ctcgcgctcg tcggtggtgg cgacgaacac ctggttcgga ttggtccggc
     5341 ccgacgggcg cgtgcccgca tcgcccatgc ggctgtaccc gagatacgag cgctcatcga
     5401 cgtcgaaata gaagtggatc gggtcgagcg acacgatgtt ggtcagcacc gtctcgttgg
     5461 cattgaccag gttgcccatc gacaccagcc ggcgcgacac ccggccggca atgggtgcct
     5521 tgatctcggt gaattccagg tccagtcggg cctgggccag ggcggcgcgc gagcggtcga
     5581 gctcggctcg cgccgtctga aaattctggc gccgctggtc gagcagctgc tccgtgatgt
     5641 tgccgcttcg gctcagcgtt tccgcgcgct gcaggtcgct ggtcgcgaaa tcgagccgcg
     5701 actgggccga gatcaccgcg gtgtccgcct ggtccaccgc cagccggtat ggccgctgat
     5761 cgatggtgaa cagcggatcc cctgtcttga cgatcgttcc atccttgaag tggatcttgt
     5821 cgatgtagcc ggacacgcgg gcacggatgt cgacctgatc gaccgcctcg aagcggccga
     5881 tgaactcgtc ccactccatg atgtccttga cgaccggctt cgccaccgag acggatggcg
     5941 gcccggccgc gccctgcgcg tgcgctgggg gcaccaatcc gcccaacgcg cacagcagga
     6001 tcaagctcgc aaggattccc gtgtggcgca gaggtggagc ggcagtcgcc gcacgaacac
     6061 tcatgacaat gctccccatc gatttggcga aaaggccttt ggcgaagaag tctcgaaaac
     6121 aggcgcccga ctgtgaaccg gccccgcacc gcggccgaat gaattcttgt caattgttat
     6181 gtgggcaggc ggcggcggac gggaaattca catttcagcg atcgcgcatc ggtaacggct
     6241 gcgaccgctt cgaagtggtg gttgaagtcg gcatcaccgc aggcggttat gcgtcccctt
     6301 tcgtggacgc cccattgcca ccgatctaat gtgtcaagtt aatccgtgtt aagcggagtc
     6361 gagaaggtgg ctgaccagac ggcacctggg gtcggacccg cgatctcgtt cgggccattt
     6421 cgcctgcttc cgtcgcagca gctcctcctg gaaggaggca agccggtgcg tctcggcagc
     6481 cgggcccttg agatcctgct cgccctggtg gagcgcgccg gcgacctcgt caccaaggag
     6541 gagctggtcg gccgcgtctg gccggacacg tttgtcgagg aaggtaatct ccgggtccat
     6601 gtggcggccc tgcgcagggc cctcggggac gggcacgcgg gcacacgcta cgtcgccaat
     6661 atccccggtc gcggctaccg attcgtcgcc ccggtatcgc tctccgcccc aacgccttcc
     6721 gcgctggcac acgcggaagc ggacgccgcg cacaacctgc cggcggcact tacgcgaatg
     6781 gtcggccgca gcgacgtcgt ggacggcctc ctcacgcagg tgccgcaaaa gcgcttcgtc
     6841 acgctcgtcg ggcctggtgg gatcggcaag acgacgctgg cgctcgccgt tgcacataac
     6901 ttgaccgggg cataccgcga cggtgtgcgc ttcgtcgacc tggcacccgt gacggacccg
     6961 cagctcgctg tcagcgcact cgcatccgcg ctcggcgtgg ccatccgttc cgacaatccc
     7021 cgccccggcc tcgcctcgtt cctggccggc aagaacatgt tgatcgtgct cgacagctgc
     7081 gagcacttga tcagcgctgc agcgtctttg gcggaggacg tgttccagaa tgctccggcc
     7141 acccatctcc tggccactag ccgcgagccg ctgcgcgccg aaggcgagca catcatgcgc
     7201 ctgtcgggcc ttgccgttcc tgccgggtcc ggcggactga ctgccgtcga cgcgcttgcg
     7261 tttcccgcag tccagctgtt cgtcgagcgc gcgaccgcaa gcacggacag cttcgagctg
     7321 accgacgcga acgctcagac ggtggtcgac atttgccgca ggctcgacgg catcgctctc
     7381 gccatcgaaa tggctgcggg acgcctcgac acgttgggcc tcgccgaggt cgcgtccctc
     7441 ctcgacgacc gctttcgact gctgacgcgg ggacggcgca cggccctgcc gcgccaccag
     7501 acgttgcgcg ccacgctcga ttggagccac agcctgttgc ccgagttcga gcagctcatg
     7561 ctgcgccgtc tcggcgtctt cgccggctgg ttcaccaccc aggccgcaag ggccgttctg
     7621 tcaagccaca agatgaattt ggccgacgtc gtcgacggcg tggccgacct ggccggcaag
     7681 tcgctcgtgg ttgccgatgt gggcggcccg acgaccttct acaggttgtt cgacacgacg
     7741 cgcgcctacg ccttggagaa gctcgccgat gccggcgaag cggacgctgt ctcgcgctgt
     7801 catgcgcatt attactgcga gctgttcgag cgagcggaaa cggagtggga gacgcgcccg
     7861 accgccgatt ggctggcgga ataccgccac atgctcgaca acctgcgcgc cgcgctcgac
     7921 tgggcgttct cgccaaaagg cgccccctcc atcggcgtcc cgctcaccgt cgcggcggcg
     7981 ccgttatggc tcgagctgtc cctgatggaa gagtgccgca cgcgcatgga gcaggcgctg
     8041 gcggcccttg gcgaagcgag ccaggacgag cagcgcaaga tgcagctcta taccgcgctc
     8101 gcctggtcgc agatgtacac gagcggctcg tcgcggcaga caggcgcggt atgggcgaac
     8161 gccctgcaat tcgcggaggc cctcgacgac ggtgattatc agctgcgatc gttatggggc
     8221 ttgtgggccg acagcatcaa caagggccgc ttccgtgacg cccttggcct ggcgaagcgt
     8281 ttctccacgg ttgcagcaac caccggcgaa gacgccgaac tgcacatcgc cgaccgaatg
     8341 atcggcgcat cgttgcattt tctcggcgat caggccggcg cccgtcggca catcgaacgc
     8401 atgctcgcca gctacgagag accacggcat cgatcgcatc tcgtgcgctt tcagttcgac
     8461 cagcgtatca ccgcgcgcat cacgctggcg cgcgttctct ggctgcaagg agctgcggat
     8521 caggcgatcg acacggtccg aagcaccgtc gacagcgccg tcgccctcga ccacatgctt
     8581 tccctgtgca atgtcctggc ccaggctgcc tgcccggttg cgcttctggc cggcgacctg
     8641 cctgcggcag agcgcttcac gaccctgctc ctagagctca caacccgcga ggctctcgat
     8701 gtctggcacg cctatggcat ctgcttccag ggccagctcc gtgtcaggcg cggcgacccg
     8761 gagggggggc tgcgacttct cggagcgggg gtcgaaaagc tccgcgccgc gaccttcgtg
     8821 caatatctca cgtcgtttct cggttcgctg gccaaaggct gcgtccgtgc cggccggata
     8881 gcagaggcac gcgcggccat cgacgaggcc ctcggacgct gcgagttgag cgacgagcgc
     8941 tggtgcatcg ccgagttgct gcgcatccgc ggcgagatcg cgctgcgcga gcacgccggc
     9001 caacccgccg ccgccgaaga gcatttcctg cattcgctcg actggtcacg ccggcaggag
     9061 gcccttgcct gggagctgaa gacgaccaca agcctggcgc gcatgcgcaa ggacaacggc
     9121 cgcgcacgtg aaggacgcga gctgctcgcc ccgatttatg cgcgtttcac agagggtttc
     9181 gcgaccgccg acctggcctc cgccaggacg ctgctcgacg agctcgcgca cgcctgaagc
     9241 tgcgcaccat cgaacatcag ttaatgacga tttgcgtgca ttaactcgtg cgtgcgcact
     9301 gaacctcgga tgatgcatgt caacgagacc tgcgaatcca ttcttgttcg aggatcacca
     9361 tcaaagactc cggggtgttg gatcatctga acagatgaga aaggcctgac acccagggtc
     9421 cca
//
LOCUS       DATAIQ010000514         2703 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_243245, whole genome shotgun sequence.
ACCESSION   DATAIQ010000514 DATAIQ010000000
VERSION     DATAIQ010000514.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2703)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2703)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2703
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_243245"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..520
                     /locus_tag="VHN20_08530"
     CDS             <1..520
                     /locus_tag="VHN20_08530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HEX2725848.1"
                     /translation="FRLASGLVAQMIEAIGLVAADASASPLPRSRVDETMATARTCYD
                     HIAGRLGVAIADALQDRGDVIFADGGGEVTASGRAFFGHLGIDLVRSSRGRRVFCRPC
                     LDWTERRYHLAGAVAAALCDHCLTRGWLERTRDTRAVTITADGRAAFASAFGIDTELL
                     AQGTARTTATAA"
     gene            complement(664..>2703)
                     /locus_tag="VHN20_08535"
     CDS             complement(664..>2703)
                     /locus_tag="VHN20_08535"
                     /EC_number="2.7.6.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012455260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0015970 - guanosine tetraphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HEX2725849.1"
                     /translation="AAILTDLKLDDATIAAAVLHDTVEDTAATLDEIKTSFGPQIGAL
                     VDGLTKIARLDLVSKRAAQGENFRKLLLAIAADVRVLLVKLADRLHNMRTLQFMPAEK
                     RKRIAEETLEIYAPLAGRMGIQEMREELEDLAFQTINPEAHETISKRLNDLSEKSEQL
                     VEEIERDLTERLAAKGLPAKVTGRKKQPYSIWRKMERKSVAFEQLSDVIGFRIVVGSI
                     DECYRALGVVHTTWPMVPGRYKDYVSTPKQNDYRSIHTTVIGPGRQRVELQIRTPDMD
                     DVAEYGIAAHALYKDGVTHGSRLAGESRAYQWLRRTVDLLAEGDNPEEFLEHTKLELF
                     HDQVFCFTPKGRLIALPRGATPIDFAYAVHTDVGNSAVGCKINGQMAPLLTELQNGDE
                     VEIVRADGQTPPAAWESLVVTGKARAAIRRATRAAVRRQYAGLGKQILERAFERAGKM
                     FSEEKLKAALSRLARTSIDDVLSAVGRGEMFSGDVVRAVYPEHKDERRVHGLANGAGW
                     ISLGHDPSLKVKLPKGDGQAPGAIPIRGVDSDLAVRFAPNGGAVPGDRIVGILTPGEG
                     VTIYPIQSPALAAFDNEPDRWLDVRWDVDSERAERFPARLALQSINEPGTLAQIAQII
                     ADHDGNIDNVSMKRRTQDFTDMTVDLAVWDLKHLNSIIAELRARPVVSRVERVMG"
BASE COUNT          372 a          898 c          971 g          462 t
ORIGIN      
        1 cttccgcttg gcctccgggc tggtcgcgca gatgatcgag gcgatcgggc tggtcgcggc
       61 cgacgcatcg gcgtcgccgc tgccgcggtc acgggtcgac gagacgatgg cgacggcgcg
      121 cacctgctac gaccacatcg ccggccggct cggcgtcgcc attgccgacg cgctgcagga
      181 tcgcggcgac gttatcttcg cagacggcgg cggcgaggtg acggcgagcg ggcgcgcgtt
      241 cttcggccat ctcggcatcg atctcgtgcg ctcgagcaga ggccggcgcg tcttctgccg
      301 cccgtgtctg gactggaccg agcggcgcta tcacctcgcc ggggccgtgg ccgcggcatt
      361 atgcgaccac tgcctcaccc gcggctggct ggagcgcacg cgcgacacgc gcgcggtcac
      421 gatcacggcc gacggccgcg cagcctttgc aagcgcgttc ggcatcgaca ctgagctttt
      481 ggcgcaagga accgcgcgca ccaccgcgac ggccgcgtga ggcgcttgcc ggccccactt
      541 cgctggaccg gccgctggat tacagcactc accggtcgct ccgcgacgca gccttttccg
      601 caggccgagg aggtgatctg caccccgctc gcttgcgatt cagctcgtcc ttgaagggga
      661 gggctacccc atcacgcgct caacgcggct gacgacgggg cgcgcgcgca gctcggcgat
      721 gatcgagttg agatgcttca ggtcccacac cgccaggtcg accgtcatat cggtgaaatc
      781 ctgcgtgcgg cgcttcatcg agacgttgtc gatgttgccg tcgtggtcgg cgatgatctg
      841 cgcgatctgc gcaagggtgc cgggctcgtt gatcgactgc agcgcgaggc gggccgggaa
      901 gcgttcggcg cgctcgctgt cgacgtccca gcgcacgtcg agccagcggt cgggctcgtt
      961 gtcgaaagcg gccagcgccg gcgactggat cggatagatg gtgacgccct cgccgggcgt
     1021 gaggatgccg acgattcggt cgccaggcac ggcgccgccg tttggcgcga agcgcaccgc
     1081 aagatcggaa tcgacgccgc ggatcggaat ggcgccgggg gcctgaccgt cgcccttggg
     1141 cagcttgacc ttgagcgagg ggtcgtggcc gagcgagatc cagccggcgc cgttggcgag
     1201 cccgtgcacg cgccgctcgt ccttgtgctc gggatagacg gcgcgcacga cgtcgccgga
     1261 gaacatctcg ccgcggccaa cggccgagag cacgtcgtcg atcgaggtcc gcgccaggcg
     1321 cgacagggcg gccttcagct tctcctcgga gaacatcttg ccggcgcgct cgaaggcgcg
     1381 ctcgaggatc tgcttgccga ggccggcata ttgccggcgc acggcggcgc gcgtggcgcg
     1441 ccggatggcg gcgcgcgcct tgccggtgac gacgagcgat tcccatgcgg cgggcggcgt
     1501 ctggccgtcg gcgcgcacga tctcgacctc gtcgccgttc tgcaactcgg tcaggagcgg
     1561 cgccatctgc ccgttgatct tgcagccgac ggcgctgttg cccacgtcgg tatgcaccgc
     1621 gtaggcgaaa tcgatcggcg tcgcgccgcg cggcagggcg atcaggcggc ctttcggcgt
     1681 gaaacagaac acctggtcgt ggaacagctc gagcttggtg tgctccagga actcttccgg
     1741 gttgtcgccc tcggcgagga ggtcgacggt gcggcgcagc cactgatagg cgcggctttc
     1801 gccggcaagg cgcgagccgt gggtgacgcc gtccttgtag agcgcgtgcg cggcgatgcc
     1861 gtattcggcg acatcgtcca tgtccggcgt gcggatctgc agctcgacgc gctgccggcc
     1921 cgggccgatc accgtggtgt ggatcgaacg atagtcgttc tgcttcggcg tcgacacgta
     1981 atccttgtag cgccccggca ccatcggcca ggtggtgtgc acgacgccga gcgcgcggta
     2041 gcactcgtcg atgctgccga cgacgatgcg gaagccgatc acgtcggaga gctgctcgaa
     2101 ggcgaccgac ttgcgctcca tcttgcgcca gatcgaatag ggctgcttct tgcgcccggt
     2161 caccttggcc ggcagcccct tggcggccag gcgctcggtc agatcgcgct cgatctcctc
     2221 gaccagctgc tcgctcttct ccgacaggtc gttgaggcgc ttgctgatgg tctcgtgcgc
     2281 ttccgggttg atggtttgga aggcgaggtc ctcgagctcc tcgcgcatct cctggatgcc
     2341 catgcggccg gcgagcggcg cgtagatctc gagcgtctcc tcggcgatgc gcttgcgctt
     2401 ctccgccggc atgaactgca gcgtgcgcat gttgtgcagc cggtcggcga gcttgacgag
     2461 cagcacgcgc acgtcggcgg cgatggcgag caggagcttg cggaagttct cgccctgcgc
     2521 cgcccgcttc gagacgaggt cgagccgggc gatcttggtg agcccgtcga cgagcgcgcc
     2581 gatctgcggc ccgaaggagg tcttgatctc gtcgagggtg gcggcggtgt cttccaccgt
     2641 atcgtgcagc acggccgccg cgatggtggc atcatccagc ttgaggtcgg tcaggatggc
     2701 ggc
//
LOCUS       DATAIQ010000515         3062 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_396230, whole genome shotgun sequence.
ACCESSION   DATAIQ010000515 DATAIQ010000000
VERSION     DATAIQ010000515.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3062)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3062)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3062
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_396230"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..873)
                     /gene="ugpC"
                     /locus_tag="VHN20_08540"
     CDS             complement(<1..873)
                     /gene="ugpC"
                     /locus_tag="VHN20_08540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012330794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sn-glycerol-3-phosphate ABC transporter
                     ATP-binding protein UgpC"
                     /protein_id="HEX2725850.1"
                     /translation="MAAVEIRNVRKAFGATAVIHGVSVDIADGEFVILVGPSGCGKST
                     LLRMIAGLENITAGEIRIGERVVNNVPPKERDIAMVFQNYALYPHMTVADNMAFSLKL
                     RRAPKAEIDTRVQRAAAILGLSQLLGRYPRQLSGGQRQRVAMGRAIVRDPQVFLFDEP
                     LSNLDAKLRVAMRTEIKELHQRLKTTTVYVTHDQIEAMTMADKIVVMHDGIVEQMGAP
                     LELYDHPDNLFVAGFIGSPAMNFIKGRIDNGGFVADGGLKLPLRSAPAASAGKPAIYG
                     IRPEHFRLAPDGIPM"
     gene            1020..1988
                     /locus_tag="VHN20_08545"
     CDS             1020..1988
                     /locus_tag="VHN20_08545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacid dehydrogenase"
                     /protein_id="HEX2725851.1"
                     /translation="MKDIEVVMPAPMMPLIVEGVARNFTLHRLWETPDQAALLREVGP
                     RVRGLAAGGSVMIDGAMMDRLPKLEIVANMGVGYDRVDAAEAGRRGIIVTNTPDVLTE
                     EVADTALGLLIATVRQLPQVDRYLRAGKWLERDYPLTATLRGRKVGIVGLGRIGKAIA
                     RRLEAFGLEVAYHGRSQQQGVSYRYYPDLKAMARDVDVLMCVAPGGPETKHLVNRDVL
                     RALGPDGVVINVGRGSVVDERALIEALKDKVILSAGLDVFEDEPRVPQELIDIDHVVL
                     LPHVGSASVHTRNAMGQLVVDNLVAWFSGKGPLTPVAETPWTGLNA"
     gene            1967..2722
                     /locus_tag="VHN20_08550"
     CDS             1967..2722
                     /locus_tag="VHN20_08550"
                     /inference="COORDINATES: protein motif:HMM:NF014968.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AprI/Inh family metalloprotease inhibitor"
                     /protein_id="HEX2725852.1"
                     /translation="MDRPQRVAAWAIALVLSAPAAAQPDLAAVAGSWELSLEGANRSC
                     RVMLSPDESPAGRLLRFPAGCRRALPILNRMGGWTAPDTDHIDLLDARGAPMLRFATQ
                     DDGMVATAASGEVFRLERPENFVQTIRLPPPPPIGVPQPTPVDPARAPPLASLPGTYL
                     VDRYAEREVCRIDLGRAMLAASGRFEVRLLDGCRDRGLAAFDPVSWRYEAGRLTITAR
                     RGHEVTLISERDGFWRRDPEIGMTLILRKMTEP"
BASE COUNT          454 a         1048 c         1062 g          498 t
ORIGIN      
        1 catcgggatg ccgtccggag cgagcctgaa atgttcgggc cggatgccgt agatggcggg
       61 cttgccggcc gaggcggccg gcgccgagcg gagcggcagc ttgaggccgc cgtcggcgac
      121 gaagccgccg ttgtcgatgc ggcccttgat gaagttcatc gccggcgatc cgatgaagcc
      181 ggccacgaac aggttgtcgg gatggtcgta gagctcgagc ggcgcgccca tctgctcgac
      241 gatgccgtcg tgcatcacga cgatcttgtc ggccatcgtc atggcctcga tctggtcgtg
      301 cgtcacgtag accgttgtcg tcttgaggcg ctggtgcaat tccttgatct cggtgcgcat
      361 ggcaacgcgc agcttggcgt cgagattgga gagcggctcg tcgaacagga acacctgcgg
      421 gtcgcgaacg atggcgcggc ccatggcgac gcgctggcgc tggccacctg acagctggcg
      481 cggatagcgg ccgagcagct gcgacaggcc gaggatggcc gccgcccgct gcacgcgcgt
      541 gtcgatctcg gctttcggcg cccgtcgcag cttgagcgag aaggccatgt tgtcggcgac
      601 cgtcatatgc ggatagaggg cgtaattctg gaacaccatg gcgatgtccc gctccttggg
      661 cgggacattg ttgacgacgc gctcgccgat gcggatctcg cctgccgtga tgttctcgag
      721 gccggcgatc atgcgcagga gcgtcgactt cccgcatccg gacggcccga ccaggatcac
      781 gaactcgcca tcggcaatgt cgacggacac gccatggatg acggctgtgg cgccgaacgc
      841 cttgcgaacg ttcctgatct cgaccgccgc catgccgtcc tcccggctat gcgcctgcgg
      901 gcttgccctc ggtcagcccg tggcgcgata tttgccccat catcaacgca cgccccgcgg
      961 agatcaagcg ggcgagccat tggccggctg ggcgtcaaca gcacgggaag gagcgagtct
     1021 tgaaggacat cgaggttgtg atgccggcgc cgatgatgcc gctgatcgtc gagggcgtgg
     1081 ccaggaactt caccctgcac cggctctggg aaacgccgga ccaggcggcc ctgctgcgcg
     1141 aggtcggccc ccgcgtccgc ggccttgccg ccggcggcag cgtcatgatc gacggcgcca
     1201 tgatggaccg cctgcccaag ctcgagatcg tcgccaacat gggcgtcggc tacgatcggg
     1261 tcgacgcggc cgaggcgggg cgccgcggca tcatcgtcac caacaccccg gacgtgctga
     1321 ccgaggaggt cgccgatacc gcgctcggcc ttctgatcgc gaccgtgcgg cagctgccgc
     1381 aggtggaccg ctacctgcgc gccggcaaat ggctggagcg ggattatccg ctcacggcga
     1441 cgctgcgcgg ccgcaaggtc ggcatcgtcg gccttggccg catcggcaag gccatcgcca
     1501 ggcggctcga ggccttcggg ctcgaggtcg cctaccacgg gcgcagccag cagcagggcg
     1561 tctcctaccg atattatccc gaccttaagg cgatggcgcg cgacgtcgac gtcctgatgt
     1621 gcgtggcgcc cggcgggccc gagacgaagc atctcgtcaa tcgcgatgtg ctgcgtgccc
     1681 tcgggccgga tggcgtcgtg atcaatgtcg gccgcggcag cgtcgtcgac gagcgcgcgc
     1741 tgatcgaggc ccttaaggac aaggtgatcc tcagcgccgg actcgacgtg ttcgaggacg
     1801 agccgcgcgt tccgcaggag ctgatcgaca tcgaccatgt cgtgctgctg ccgcatgtcg
     1861 gctccgcctc cgtgcacacg cgcaatgcca tgggccagct cgtcgtcgac aatcttgtcg
     1921 cgtggttctc cggcaagggg ccgctgacgc cggtcgcgga aacgccatgg accggcctca
     1981 acgcgtagcg gcctgggcga tcgccctcgt gctcagcgcg cccgcggcgg cgcagccgga
     2041 tctggcggcg gtggccggca gctgggaatt gtcgctcgag ggcgccaatc gcagctgccg
     2101 ggtcatgctc tcgcccgacg agtcgccggc cggccggctg ttgcggttcc cggccggctg
     2161 ccggcgtgcc ctgccgatcc tcaaccgtat gggcggctgg actgcgcccg acaccgacca
     2221 catcgatctt ctcgacgccc ggggcgcgcc catgctgcgt ttcgcgacgc aggacgacgg
     2281 catggtcgcg accgccgcca gcggcgaagt gtttcgcctg gagcggccgg aaaacttcgt
     2341 gcagacgatc cgcctgccgc cgcccccgcc gatcggcgtg ccgcagccga cgcccgtcga
     2401 cccggcccgg gcgccgccgc tcgcgtccct gcccgggacc tatctggtcg accgctacgc
     2461 cgagcgcgag gtctgccgca tcgacctcgg gcgcgccatg ctcgccgcct ccgggcgttt
     2521 cgaggtgcgg ctcctggatg gctgccgcga ccgcgggctc gccgccttcg atccggtgtc
     2581 gtggcgctac gaggccggcc gtctgacgat caccgcgcgg cgcggccacg aggtcacgct
     2641 gatctccgag cgcgacgggt tctggcgccg cgacccggag atcggcatga ccctcatcct
     2701 gcgcaagatg accgagccgt agcgcgaagg cccgttggga cacgcgcgag accggttggt
     2761 gacccggctc agtattttgc tggaaatcta ggggagcctc acccgccccc tcgcggaagc
     2821 gccatcagta ttttgctgga aatctggtgg agcctcaccc gccccgccgc ggaagcggcc
     2881 tcagtatttt gctggaaatc tggtggagcc tcaccccctc cccgaagcgg gagagggaat
     2941 ccgccagcgc agggcgctct acggcacgaa cttgcccgcg agctcgtcgt cgatatgggc
     3001 gcggatgatc gcctcgaagc tctcgtcggc cttgaagccg agctgcagcg accgtttcgg
     3061 ct
//
LOCUS       DATAIQ010000516         1519 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_26750, whole genome shotgun sequence.
ACCESSION   DATAIQ010000516 DATAIQ010000000
VERSION     DATAIQ010000516.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1519)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1519)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1519
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_26750"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1143
                     /locus_tag="VHN20_08555"
     CDS             <1..1143
                     /locus_tag="VHN20_08555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019197609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HEX2725853.1"
                     /translation="GERPLIPQTGRKADALNKNLQRIKLPPGFKIELYAIVPDARHMA
                     VGPNAGVVFVGTRKSKVYAVTDRDKDRVADEVKEFAPSIEFKIPNGVCFSRDGMLYLA
                     EQNRVLIFPAAEFFYEGPDVAAFLVVKQGDLIPPSEESYNHTARTCRVGPDNKLYISL
                     GQPYNVPPKEKMDLYTKVGIGGIIRVDQDGKNREVFALGVRNSVGMDFNPADKTLWFT
                     DNQVDGMGDDQPPGELNRAAQAGQHFGFPWYGGGTTRTNEYKDDKVPDGVVPAQVEME
                     AHAADLGMTFYTGAQFPERYKGGIFSAQHGSWNRTKPVGARVMFTPLKPDGTADKTEV
                     FAEGWLTDNGEYLGRPVDVATLPDGSLIVSDDTAGAIYRISYEGRR"
     gene            1152..1481
                     /locus_tag="VHN20_08560"
     CDS             1152..1481
                     /locus_tag="VHN20_08560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018964068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEX2725854.1"
                     /translation="MQDRIFGAAALAAALVVVAPAAAADARAGRAKAVMCQACHGMDG
                     LSKHPEAPHLAGQIENYLAKSLHDYRTGERKNEMMTIVAKDLADEDIANLAAFYSGIQ
                     IEVVPPY"
BASE COUNT          286 a          532 c          484 g          217 t
ORIGIN      
        1 ggcgaacgcc cgctgatccc gcagaccggc cgcaaggccg acgccctgaa caagaacctg
       61 cagcgcatca agctgccgcc cgggttcaag atcgagctct atgcgatcgt cccggacgcc
      121 cgtcacatgg cggtcggacc gaacgccggc gtcgtcttcg tcggcacgcg caagagcaag
      181 gtctacgcgg tcaccgaccg cgacaaggat cgcgtcgccg acgaggtcaa ggagttcgcg
      241 ccgtcgatcg agttcaagat ccccaacggc gtctgcttct cgcgcgacgg catgctctac
      301 ctcgccgagc agaaccgggt cctcatcttc ccggccgccg agttcttcta cgaggggccg
      361 gacgtggcgg ccttcctggt cgtcaagcag ggcgacctga tcccgcccag cgaagagagc
      421 tacaaccaca cggcgcggac ctgccgcgtg ggaccggaca acaagctcta catctccctc
      481 ggccagccct acaacgtgcc gcccaaggag aagatggacc tctacaccaa ggtcggcatc
      541 ggcggcatca tccgcgtcga ccaggacggc aagaaccgcg aggtgttcgc ccttggggtg
      601 cgcaattccg tcggcatgga cttcaacccg gccgacaaga cgctctggtt cacggacaac
      661 caggtcgacg gcatgggcga cgatcagccg ccgggcgaac tcaaccgcgc cgcgcaggcc
      721 ggacagcatt tcggcttccc gtggtacggc ggcggcacca cgcgcacgaa cgaatacaag
      781 gacgacaagg tcccggacgg cgtcgtgccg gcccaggtgg agatggaggc tcacgcggcc
      841 gacctcggca tgaccttcta caccggggcc cagttccccg agcgctacaa gggcggcatc
      901 ttctcggccc agcacggttc gtggaaccgg acgaagccgg tcggcgcgcg cgtcatgttc
      961 acgcccctga agccggacgg caccgccgac aagaccgaag tcttcgccga aggctggctc
     1021 acggacaacg gcgaatatct cggccggccg gtggacgtcg ccaccctgcc ggacggctcg
     1081 ctcatcgtct cggacgatac cgccggcgcc atctatcgca tctcctacga gggccggcgc
     1141 tgagggtcgg gatgcaggat cggatcttcg gggccgccgc tctggcggcg gcccttgtgg
     1201 tcgtggcccc ggcggctgcc gccgacgccc gcgccggccg cgccaaggcc gtcatgtgcc
     1261 aggcgtgcca cggcatggac gggctctcga aacatccgga ggcgccgcac cttgccggcc
     1321 agatcgagaa ctatctcgcc aaatcgctgc acgactaccg gacgggcgag cgcaagaacg
     1381 agatgatgac gatcgtcgcc aaggacctcg ccgacgagga catcgccaac ctggcggcgt
     1441 tctattccgg catccagatc gaggtggtgc cgccctatta gttcatgatc agccgaagtg
     1501 gactccactt cggcgaaaa
//
LOCUS       DATAIQ010000517         5567 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_119995, whole genome shotgun sequence.
ACCESSION   DATAIQ010000517 DATAIQ010000000
VERSION     DATAIQ010000517.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 5567)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5567)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5567
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_119995"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(34..882)
                     /locus_tag="VHN20_08565"
     CDS             complement(34..882)
                     /locus_tag="VHN20_08565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018860257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEX2725855.1"
                     /translation="MSMSALSTSPVAQAAAPDLGGVKRRQQAAWSSGDYAVVGTTLQI
                     VGEELCEALDLRAGHRVLDVAAGNGNVALAAARRWCEVVATDYVPALLDRASQRAAAD
                     GLRMEFRVADAEALPFADESFDAVVSTFGVMFTADQDRAAAELVRVCRRGGKIGLANW
                     TPDGFIGQLFKTIGRHVPPPAGVRSPAQWGTRARLAELFTPHGATVEATPRHFVFRYR
                     SPEHWLEVFRTFYGPAQKTFDSLDTHGQTALERDLLDLARGFNRAGDGTLAAPSEYLE
                     VVIRRA"
     gene            complement(1215..1529)
                     /locus_tag="VHN20_08570"
     CDS             complement(1215..1529)
                     /locus_tag="VHN20_08570"
                     /inference="COORDINATES: protein motif:HMM:NF025392.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4242 domain-containing protein"
                     /protein_id="HEX2725856.1"
                     /translation="MLRKFVIERGVPGIGGMNAVEMGEAAKTSNNALAQIAGIQWQHS
                     YVTADKTFCIYLAESEQQIREHARLSGFPADKITEVTEIIDPTTERQCALARPRPVAA
                     AG"
     gene            complement(1760..2644)
                     /locus_tag="VHN20_08575"
     CDS             complement(1760..2644)
                     /locus_tag="VHN20_08575"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEX2725857.1"
                     /translation="MIVYPRERWAALPPGLKGAALVSLGSLTLVVMAVLTKFLGARLS
                     SFEILFFRSAVGFLFLLPLFARDPGEPFRTRRFGMHLLRGAVGAVANMCFFWTITAML
                     LADSMALQFSRPLFMIPLAFVFLGEWAGLRRSLIAVIGFAGIMLYARPFTAGFDPNAV
                     VGALGAIFAGLVVVCIKRLSTTEPTKVIMFYYAFWTTVFVAPPAVALWVTPTPGELLL
                     LVLVGFLGITGQGMITHGLTMGDATTLVPLDYSRVLYAAALGFVIFGEVPGLWSLAGM
                     TLILVSSIALVLDEKRHR"
     gene            complement(2687..3505)
                     /locus_tag="VHN20_08580"
     CDS             complement(2687..3505)
                     /locus_tag="VHN20_08580"
                     /inference="COORDINATES: protein motif:HMM:NF013429.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase"
                     /protein_id="HEX2725858.1"
                     /translation="MNTISLAALTILDAGPAGQIRAAAEAGFDAVGLRLNPLLPSDPA
                     VVGRPAAEAEIRDLLSGTGLGVLEIGVFPIRADMDVARLEPVMDFSATIGAKYIVCPV
                     EDGEETRRAETFSRVCELARAAGLAALVEFNPYSACPNLAGALDLVASARQPNGGLCI
                     DAFHLSRSGGHPDDLRGLEPSLLPIVHFCDARPLPAAQRSVDEVRRESRTARLLPGDG
                     VLPLSELLRALPEDVAISVEAPTAANVHLPPAERARLALTATRRVLDGTRADGR"
     gene            complement(3696..4382)
                     /locus_tag="VHN20_08585"
     CDS             complement(3696..4382)
                     /locus_tag="VHN20_08585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011089099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX2725859.1"
                     /translation="MTGASKGIGRAIAERLVGAGARVWNWDLEPTTYEGAQHVTVDVT
                     DADQISTAIARVLREGSGIDIIVNNAGFVGGNRSVEALDSADWRRIIDVNLTGVFEVS
                     RQVVPVMRRAGWGRIVNMASLAGKEGTPGLSAYSAAKAGVIALTKSLAKELADTEIRV
                     NCVAPAAIATDLLEQMDPATVQVMIDKSPMKRLGTVDEVADLVLWLCSEACSFSTGAA
                     FDLSGGRATY"
     gene            complement(4496..5302)
                     /locus_tag="VHN20_08590"
     CDS             complement(4496..5302)
                     /locus_tag="VHN20_08590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012497686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX2725860.1"
                     /translation="MAGRLAGKVAMVVGAGSVGPGWGNGKASAVLFAREGARVFCVDI
                     DVAAAMETAEIIRGEGGMAEAHQADASKADQVATMVATCLARYERIDVLDNNVGIAEV
                     GGVVELSEEAWDRVFAVNLKSCFLAMKHVIPVMERQAGGSIINISSIASIRYTGVPYA
                     TYYATKAAMNHLTRTTAVQYAAKHIRINAILPGLMKTPMVEKSAGLAQSYGGGDVAAM
                     WRARDAQVPMGHMGDAWDVANAALFLASDESRYVTGIELVVDGGVTLKYA"
     gene            complement(5302..>5567)
                     /locus_tag="VHN20_08595"
     CDS             complement(5302..>5567)
                     /locus_tag="VHN20_08595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008134765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="long-chain fatty acid--CoA ligase"
                     /protein_id="HEX2725861.1"
                     /translation="VREASVIGRPDHEWGEVVVAYVVGDVSPAELDRLCLERIARFKR
                     PKDYVLVPALPKNSYGKVLKTELRVMDGERAPQSERLTTSGGG"
BASE COUNT          946 a         1911 c         1839 g          871 t
ORIGIN      
        1 cccgggagac gacggcggcg gtcgcacgcc gcttcacgct cggcggatga cgacttccag
       61 atattcgctc ggcgcggcca gcgtaccgtc gccggcgcgg ttgaagccgc gcgcgaggtc
      121 gagaagatcg cgttcgagcg ccgtctgccc gtgggtgtcg agactgtcga acgtcttctg
      181 cgccggtccg taaaatgttc tgaagacctc gagccagtgc tcgggcgagc ggtagcggaa
      241 cacgaagtgc cgcggcgtcg cctcgaccgt ggcgccatgc ggcgtgaaca gctcggcgag
      301 ccgcgcgcgc gttccccact gcgcaggcga cctgacgccc gccggtggcg gcacgtgccg
      361 gccgatggtc ttgaacagct ggccgatgaa gccatccggc gtccagttgg cgagcccgat
      421 cttgccgccg cgtcggcaca cgcgcacgag ctcggccgcg gcgcggtcct ggtccgccgt
      481 gaacatgacg ccgaaggtcg acaccacggc gtcgaagctc tcgtccgcga acggcagcgc
      541 ctcggcgtcg gcgacgcgga attccatgcg cagcccgtcg gcggcggcgc gctggctggc
      601 gcgatcgagc agcgccggca cgtagtcggt ggccacgacc tcgcaccagc gtcgcgccgc
      661 cgcgagagcg acgttgccgt tgccggcggc gacgtcgagg acccggtgcc cggcgcggag
      721 atcgagcgcc tcgcacaact cttcaccgac gatctgcagg gtggtgccga cgacggcata
      781 atctccggac gaccaggctg cctgctggcg ccgtttcacg ccgccgaggt caggggctgc
      841 cgcctgcgcg accgggctgg tggacagggc cgacatggac atgttcattc tccgttgtgg
      901 gaagctgctt cacgcggagg gcccgtcgcc tttgatgcgc ggccagccgc cggtcgagac
      961 ccttgggcgc gtcgcgcttc accgtcgcgc agcgttccgg cgttagagca tgatccggca
     1021 aagtgggcac cgctttgccg aaaaagatca tgcggcacaa agagaagacg aggatgatcc
     1081 ggcaaagtgg gcaccgcttt gccgaaaaga tcatgcggca caaagagagg aggagcatga
     1141 tcgattcaat ctgaagcgat gatgcccgat ggacggcagc agcccttgtg cgccgccccg
     1201 taatggcctg gcgatcaacc ggccgccgcg actggccgcg gccgcgccag cgcgcattgc
     1261 cgctcggtcg tcggatcgat gatctcggtg acctccgtga tcttgtcggc aggaaagccg
     1321 gatagccgcg catgctcgcg gatctgctgc tcgctttcgg ccagatagat gcagaaggtc
     1381 ttgtccgcgg tcacatagga gtgctgccac tggatgccgg cgatctgcgc cagggcattg
     1441 ttggacgtct tcgccgcctc gcccatctcg acggcgttca tgccgccgat gcccggcacg
     1501 ccgcgttcga tcacgaattt ccgcaacatg atttggctcc tcgtgtttgg ccggcacctg
     1561 cgtgcccgcc aggcggctcc ttactgctgt cgtcccgcgg gagcggcgcc ggaatgtcgc
     1621 tcgtcgcctg ccctcgaccg cccgcactat gcgccgggcg gggacacaaa gaccttgccc
     1681 attccttgag gccgcgttga gattgccttg atttttcagc cgcggcgcca ggcggatggc
     1741 tcgtcgcgtc cggcggcggt taccggtgcc gcttctcgtc gagcacgagg gcgatcgagc
     1801 tcacgaggat gagcgtcatg ccggcgaggc tccacagccc gggcacttcg ccgaagatca
     1861 cgaagcccag tgccgcggcg tagagcacgc gggaataatc gagcggcacg agcgtcgtcg
     1921 cgtcgcccat ggtgagcccg tgcgtgatca tgccctgccc ggtgatgccg aggaatccga
     1981 cgaggaccag aagcagcagc tccccgggcg tcggcgtgac ccacagcgcg accgccggcg
     2041 gcgcgacgaa caccgtcgtc cagaacgcgt aatagaacat gatgaccttg gtcggctcgg
     2101 tcgtggacag ccgcttgatg cacacgacga ccaggcccgc gaagatggcg ccgagcgccc
     2161 ccacgacggc gttcgggtcg aagcccgccg tgaacggccg cgcatacagc atgatgccgg
     2221 cgaagccgat cacggcgatg agcgagcggc gcagccctgc ccattcgccg aggaagacga
     2281 aggcgagcgg gatcatgaac aacggccgcg aaaactgcag cgccatcgaa tccgccagca
     2341 gcatggccgt gatggtccag aagaagcaca tgttggcgac cgcgccgacc gcgccgcgga
     2401 gcagatgcat gccgaagcgg cgcgtgcgga acggctcgcc gggatcccgc gcgaacagcg
     2461 gcagcaggaa caggaagccg acggcggatc ggaagaacag gatctcgaag ctggacaggc
     2521 gcgccccgag aaacttggtc agcacggcca tcacgaccag ggtcagcgac ccgagcgaga
     2581 ccagggccgc gcctttcaac ccgggcggca gcgcggccca gcgctctcgg ggataaacga
     2641 tcatcggcgc gaagcggaca acacgatcat gcgtcgggcg gcacgtttat cggccgtccg
     2701 cgcgcgtgcc gtcgagaacg cggcgcgtcg ccgtgagcgc gagccgggcc cgctcggccg
     2761 gcgggagatg cacattcgcc gccgtcgggg cttcgacgct gatcgccaca tcttccggga
     2821 gggcgcgcag cagctcggac agcggcagga caccgtcgcc cggaagcagc cgcgccgtcc
     2881 gcgactcgcg tcgcacctcg tcgacgctcc gttgtgccgc gggcaacggg cgcgcgtcgc
     2941 agaaatgcac gatcggcagc aaggacggct ccagtcccct cagatcgtcc gggtggccgc
     3001 ccgacctcga gaggtggaac gcgtcgatgc agagcccgcc gttcggctgc cgcgccgacg
     3061 ccacaagatc cagagcgccg gcgaggttcg ggcaggcgct gtacggattg aactcgacga
     3121 gcgccgccag cccggcggcc cgcgcgagct cgcacacgcg cgaaaaggtt tcggcccggc
     3181 gcgtttcctc gccgtcctcg accgggcaga cgatgtattt cgctccgatg gtcgcgctga
     3241 agtccatgac cggctcgagg cgcgcaacgt ccatgtcggc gcggattgga aagacgccga
     3301 tctccagcac gccgagcccg gtgcccgaga gcagatccct gatctcggct tccgcggccg
     3361 ggcgccccac cacggcgggg tcgctcggca gcagggggtt caggcgcagg ccgacggcgt
     3421 cgaagcctgc ctccgcagcg gcgcggatct gtcctgcagg gcccgcgtcg agaatcgtaa
     3481 gcgctgcaag ggagatggtg ttcatcaatt cgtctcggga gcgggttggc ggcaaccgcc
     3541 cttagcttct ccgtggcggc agagctagtc acctttgtgc aacctgcgcc cgcacgatgc
     3601 atgcgacgcg accttcggag gcccatcccg tcctgtcagt tcggaaagcc cgcgagaggg
     3661 aagctcagcc gcttaagaaa cgcaatggtc gccactcaat aggtcgctcg ccctcccgag
     3721 aggtcgaagg ccgcgcccgt gctgaatgag catgcctccg agcatagcca gagcacgaga
     3781 tcagccacct cgtctacggt tcccagccgc ttcatcgggc ttttgtcgat catgacctgc
     3841 accgtcgccg gatccatctg ctccaggagg tcggttgcga tcgctgccgg cgcgacgcag
     3901 ttcacgcgga tctccgtgtc cgccagctct ttggcgagcg atttcgtcaa ggcgatcacg
     3961 cccgccttgg ctgcggaata ggccgacagg ccgggcgtcc cctccttgcc ggcgagagac
     4021 gccatgttga cgatgcgacc ccagccggcg cgccgcatca ccggcaccac ctgccgcgaa
     4081 acctcgaaca cgcccgtgag attcacgtcg atgatccgcc gccaatcggc ggaatcgagt
     4141 gcctcgacgg atcggttccc gccgacgaaa cctgcattgt tgacgatgat gtcgatgccg
     4201 gagccctcac ggagcacgcg ggctatggct gtggagatct ggtctgcatc ggttacatca
     4261 accgtgacgt gctgcgcccc ctcatatgtg gtcggctcca ggtcccagtt ccaaacccgc
     4321 gcgccagcgc cgacgagccg ctctgcaatg gcgcggccaa tccccttcga cgcgccggtc
     4381 acgacggcgt ttcttcgcga catgtcgtaa gcaaccggca tgaatgcacc tctttccgag
     4441 catcacgggg cctcgctgag atccgccatc ccgcctggcc cgacacatgc aagagtcacg
     4501 cgtatttgag agtgacgccg ccgtcgacga cgagctcaat gccagtcacg taacgcgact
     4561 cgtcggaagc gaggaacagg gcggcgttgg ccacatccca cgcgtcgccc atatggccca
     4621 tcggcacctg ggcgtcgcga gctcgccaca tggccgcgac gtcgccgccg ccgtagctct
     4681 gcgccagccc cgccgacttc tcgaccatgg gcgttttcat caggccgggc aggatcgcgt
     4741 tgatgcggat gtgtttggcc gcgtattgca ccgccgtcgt gcgggtcaaa tggttcatcg
     4801 cggccttcgt ggcgtaatat gtcgcgtagg gaacgccggt gtagcggatg gacgcgatcg
     4861 aagagatatt gatgatcgag cctccggcct ggcgttccat gaccgggatg acgtgcttca
     4921 tggccaggaa gcagctcttg agattgaccg cgaacacgcg gtcccacgcc tcctcggaca
     4981 gctcgacgac accgcccact tcggcgatgc ccacattgtt atcgagcacg tcgatgcgct
     5041 cgtagcgtgc gagacaggtt gcgaccatcg tggcgacctg gtctgccttc gacgcatcgg
     5101 cctggtgagc ttcggccatg cctccttcgc cgcggatgat ctcggcggtc tccatggcag
     5161 cggcaacgtc gatgtcgacg cagaagacgc gcgcaccctc gcgcgcgaac agcacggcgc
     5221 ttgccttgcc gttgccccag cccggcccca ccgagccggc gcctacgacc atagccacct
     5281 tccctgccag acgtcccgcc atcacccacc gcctgacgtc gtcaaacgct cgctttgcgg
     5341 cgcccgctcg ccgtccatca cgcgcagctc cgtcttgagg accttgccgt agctgttctt
     5401 cggcaacgcg gggaccagga cgtaatcctt cggacgcttg aagcgggcga tgcgctcaag
     5461 gcagagccgg tcgagctctg ctggcgagac gtcgccgacc acgtaggcga ccaccacctc
     5521 gccccattcg tggtccgggc ggccgatcac cgacgcctcg cgcaccc
//
LOCUS       DATAIQ010000518         1572 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_335029, whole genome shotgun sequence.
ACCESSION   DATAIQ010000518 DATAIQ010000000
VERSION     DATAIQ010000518.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1572)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1572)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1572
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_335029"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..654
                     /locus_tag="VHN20_08600"
     CDS             <1..654
                     /locus_tag="VHN20_08600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725862.1"
                     /translation="ASAPRPTPPPIREAVPVKPAQRAAPARAPQQPPAAAPEPPPPSR
                     LPAEPPARQIAAHAAARAPDQGSGDAAVLSDMARQLEDALKRPLAPTKGVNTARPQNG
                     PAPQMEEAYQRRPQPAPKAAPPASPPPVVAAPVPPPRAVETYDSQQRSRPSTVTRIRA
                     AAEPEPPKPVPAAEPPPAARNATAPQEQGDPFSVEEIEAEFARLLGRPVDRNDRANH"
     gene            841..1560
                     /gene="fliP"
                     /locus_tag="VHN20_08605"
     CDS             841..1560
                     /gene="fliP"
                     /locus_tag="VHN20_08605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020090841.1"
                     /note="The bacterial flagellar biogenesis protein FliP
                     forms a type III secretion system (T3SS)-type pore
                     required for flagellar assembly; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system pore protein
                     FliP"
                     /protein_id="HEX2725863.1"
                     /translation="MALAVAAAGIAAASAAAAQSLTLDLGPGGGVTERALQLVALVTV
                     LSLAPSILVMVTSFTRIVVVLSLLRSAIGTQTAPPNAVIVGLSLFLTLFVMAPTFREA
                     YRVGVEPLLAGQLQTGPAFERSSAPFRTFMMRHVREKDLALFVDLAREPQPRQPEDIG
                     LHVLVPAFMISELRRAFEIGFLLFVPFLIIDLVVASILMSVGMMMLPPVTVALPFKLI
                     FFVLVDGWGLVSGSLVQSYGG"
BASE COUNT          214 a          597 c          518 g          243 t
ORIGIN      
        1 gccagtgcgc cgcgtccgac gcccccgccc atccgcgaag cggtgcccgt gaagccggca
       61 cagcgcgcgg cccccgcccg ggcgcctcag cagcctccgg cggcggcccc ggaaccacct
      121 cccccctcgc ggctgcccgc cgaaccgccg gcgcggcaaa tcgctgcgca tgccgcggcg
      181 cgcgcgcccg accagggctc aggcgatgct gccgtcctgt ccgacatggc gcggcagctc
      241 gaggacgcct tgaagcgccc gctggcgccg acgaaaggcg tcaatacggc gcggccgcag
      301 aacggccccg cgccgcagat ggaggaggcc taccagagaa ggccgcagcc ggcccccaag
      361 gcggcgccgc cggcgtctcc gccacccgtc gtggctgcac ccgtcccgcc gccgcgagcg
      421 gtcgagacct acgactcgca gcaaaggtcg aggccttcca ccgttaccag aatccgcgcg
      481 gcagccgagc ccgagccccc gaagcctgtt cccgcggccg agccgccgcc ggccgcgcgc
      541 aacgcaaccg cgccgcagga gcagggagac cccttctcgg tggaagagat cgaggcggag
      601 ttcgcgcggc tcctgggccg gccggtcgat cgcaacgatc gggcgaatca ctgattcccg
      661 tcacccgtca aatctaacca aaccataaat cctggccgac cgtggcggcc atgcgcttgc
      721 gtcggccgtt gagccaccgc agggtcgcgc ccgcaaaagg ggcgaatcac tttccgaatg
      781 ttcctccgac ctggctcgaa aacccggcgc aacggtttcc gccgactgcg cgtgcatgcg
      841 atggcgctcg ccgtggcggc agccggcatc gcggccgcca gcgccgccgc agcgcaatcg
      901 ctcacgcttg atctcggccc cggcgggggc gtgacggagc gcgcgctgca gctcgtcgcg
      961 ctggtgacgg ttctgtcgct ggcgccgtcc atcctggtga tggtgacctc gttcacgcgc
     1021 atcgtcgtcg tgctgtcgct gctgcgctcg gcgatcggca cgcagaccgc cccgcccaac
     1081 gcggtgatcg tcgggctctc gttgttcctc acgctgttcg tcatggcgcc gaccttccgc
     1141 gaggcttacc gggtcggcgt cgagccactg ctcgccggtc agctgcagac cggaccggcc
     1201 ttcgagcgca gctccgcgcc gttccgcacc ttcatgatgc gtcacgtgcg cgagaaggac
     1261 ctcgccctgt tcgtcgatct cgcgcgcgag ccgcaaccgc ggcagcccga ggatatcggg
     1321 ctgcatgtgc tggtcccggc cttcatgatt tctgagctgc gccgcgcctt cgagatcggc
     1381 ttcctattgt tcgtgccgtt cctgatcatc gacctcgtgg tcgcgtcgat cctgatgtcg
     1441 gtcggcatga tgatgctgcc gccggtcacg gtcgccctgc ccttcaagct gatcttcttc
     1501 gtgctcgtcg acggctgggg actcgtctcc ggctcgctcg tgcagagcta cgggggctag
     1561 cccgggcggg gc
//
LOCUS       DATAIQ010000519         1741 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_442299, whole genome shotgun sequence.
ACCESSION   DATAIQ010000519 DATAIQ010000000
VERSION     DATAIQ010000519.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1741)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1741)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1741
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_442299"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..682
                     /locus_tag="VHN20_08610"
     CDS             <1..682
                     /locus_tag="VHN20_08610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013500204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX2725864.1"
                     /translation="VISDAPGPNECALQILPPPEMPPALSAKKIDGYIVAEPFNALGE
                     LRAGARMLRFTGDIWKNHPCCVVVAHERQTIERPEWSQKVVDAIVRAQIYSSKNKTEV
                     ARLISKDGKGYLPMPADVVIKAVSDYGDAYDANGAIRHRDWRNGRIDFQPWPYPSATK
                     LIVQAMAETVVEGDATFLKGLDPDFVVKDLVDYRFVKSALERFPEWAEDPSVDRASPF
                     AREELLTL"
     gene            679..1497
                     /locus_tag="VHN20_08615"
     CDS             679..1497
                     /locus_tag="VHN20_08615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016921403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX2725865.1"
                     /translation="MTGTIAALVRAPLRIPPVPFVAWLGPPALGIGALLALWWAAGLV
                     LESDPRFAAFQGFALSPALSSFADLIASGDAWRAAAPSLLRIGQGLLWAFVVGAPVGL
                     AIGASALLERIVQLPFQILRMISPLAWMPLAILAFDGWDAAIVFLIAAAAIWPILFAT
                     AAGVKRIDPVWLAMARNLGGRPLAVLHRVIIPAVAQDILTGFRLALGVAWVVLVPAEY
                     LGVTSGLGYAINDARDTLSYDRLAALVLLIGLIGYALDGLVANLLARVRWTPSI"
     gene            1516..>1741
                     /locus_tag="VHN20_08620"
     CDS             1516..>1741
                     /locus_tag="VHN20_08620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003601340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family peroxiredoxin"
                     /protein_id="HEX2725866.1"
                     /translation="MSQTKLKEIVSTFETIDRDALLALAEKGKADPTAVRTVRSKTIA
                     EGRRFRHLNYVRNLPAHIVDEPPQLLGDDTA"
BASE COUNT          251 a          632 c          552 g          306 t
ORIGIN      
        1 ggtgatctcc gatgcgccgg gcccgaacga atgcgcgctg cagatcctgc ccccgcccga
       61 gatgccccct gctttgtcgg ccaagaagat cgacggctac atcgtcgccg agccgttcaa
      121 cgcgcttggc gagctgcgcg ccggtgcgcg catgctccgc ttcaccggcg acatctggaa
      181 gaatcatccg tgctgcgtcg tcgtcgcgca cgagcgccag acgatcgagc gcccggaatg
      241 gtcgcagaaa gtggtcgacg cgatcgtcag ggcgcagatc tattcgtcca agaacaagac
      301 cgaggtggcg cgcctgatct cgaaggacgg caagggctac ctgccgatgc cggccgacgt
      361 ggtcatcaag gcggtgagcg actatggcga cgcctacgac gccaatggcg cgatccggca
      421 tcgcgactgg cgcaacggcc gcatcgactt ccagccctgg ccttatccgt cggcgaccaa
      481 gctgatcgtc caggccatgg cggagaccgt ggtggagggc gacgccacct tcctcaaggg
      541 tctcgacccc gacttcgttg tcaaggacct cgtcgactac cgcttcgtca aatccgcgct
      601 cgagcgcttc ccggaatggg ccgaagaccc gagcgtcgac cgcgccagcc cgttcgcgcg
      661 cgaggagctg ctgacgctat gaccggaacc atcgcggctc tggtccgggc gccgctgcgc
      721 attccgcccg tgccgtttgt ggcttggctc gggccgccgg cgctcggcat cggcgcgctg
      781 ctcgccctgt ggtgggcggc cggcctcgtc ctcgaaagcg atccgcgttt cgcggcgttt
      841 cagggctttg ccctcagtcc cgcgctgtcc tcctttgccg atctgatcgc gtccggcgac
      901 gcctggcgcg cggcggcccc gagcctcttg cgcatcgggc agggcctgct ctgggcgttc
      961 gtcgtcggcg cgcctgtcgg cctcgcgatc ggcgcctctg cgctgctcga gcgcatcgtg
     1021 cagctgccgt tccagatcct gcgcatgatc agcccgctgg cgtggatgcc gctcgccatc
     1081 ctggccttcg acggctggga tgccgccatc gtgttcctca tcgctgcggc ggcgatctgg
     1141 ccaattctgt tcgccacggc agcgggcgtg aagcgcatcg atcctgtctg gctggccatg
     1201 gcgcgcaatc tcggcggcag gccgctcgcg gtgctgcacc gcgtcatcat tcctgccgtc
     1261 gcgcaggaca tcctgaccgg tttccgcctg gcgctcggcg tagcctgggt cgtgctcgtg
     1321 ccggccgaat atctcggcgt cacgagcggg ctcggatacg ccatcaacga tgcccgcgac
     1381 accctttcgt acgaccgcct cgctgcgctc gtgctgctga tcggactgat cggctacgcc
     1441 ctcgacggcc tcgttgcgaa cctgctcgcg cgcgtccgct ggaccccttc catctaaacc
     1501 aacaggagtt cctccatgtc ccagaccaag ctcaaggaaa tcgtctccac cttcgagacc
     1561 atcgaccgcg acgcgctgct cgcgctcgcc gagaagggca aggccgatcc gaccgcggtg
     1621 cgcacggtgc gctcgaagac gatcgccgaa ggccggcgct tccgccatct caactacgtc
     1681 cgcaacctgc cggcgcacat cgtcgacgag ccgccgcagc tgctcggcga cgacaccgcc
     1741 c
//
LOCUS       DATAIQ010000520         3526 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_304208, whole genome shotgun sequence.
ACCESSION   DATAIQ010000520 DATAIQ010000000
VERSION     DATAIQ010000520.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3526)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3526)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3526
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_304208"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1093
                     /locus_tag="VHN20_08625"
     CDS             <1..1093
                     /locus_tag="VHN20_08625"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX2725867.1"
                     /translation="RAFETEGVCSPYQRFDWVHAFTTELAPRDGLRARILLLRDEAGR
                     PALLLPLVLRRSRGVTIATFAGGKQANFNLPIVAKGFASRVPARDIKGLLLDAGRALG
                     ADVFVFVNQPRAWRGESNPLASLDNVASPSQGFKLSLGPNADQTVARAFSSETRKKMR
                     KKVRLLSELGEPRFLQGRTAADVETILAAFFEQKQARFRDAGIQNPFEGEAQNFIRRA
                     CLAGLDRGEPAIELHAMAIGERIVATFGGAADRWRLCGMFNSFDTGPDVSRHSPGELL
                     LAQIIRVQCERGHDVFDLGVGEARYKTSLCDEVEELVDTFVPVTVRGKAYAAATTQLV
                     ACKRFVKQTAWTWRAVNLLRGLKATLRRS"
     gene            complement(1215..3407)
                     /locus_tag="VHN20_08630"
     CDS             complement(1215..3407)
                     /locus_tag="VHN20_08630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018043575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exopolysaccharide transport family protein"
                     /protein_id="HEX2725868.1"
                     /translation="MIQPFAASSGSGVIADPGSESINLAQIWRALIMRARWIVLPTLV
                     AFLGALIFVNIVPPRYTGETKVLLESRENFYTRPGQEREAQTPQIDEQAVASQVQVVL
                     SRDLARAAVKRLGLVGNPEFDPLVRGVGPVRRFMMLLGLGGDPYDRAPEERVLDAYYD
                     HLLVYPTGRSRVLTIEFRSKDAELSAKGANTAAELYLDWLEGSKKETARAASNWLGPA
                     IDSLRSRVSQAEAKVEAFRARTGLLVGGNNATITAQHLSDLNTQLAQARSAHADSQAK
                     ARLIRDLVRSGQTFEIPDVANNELIRRLIEQRVTLRAQLALEARTLLSEHPRIKELNA
                     QLADLESQIRGATERTARALENEARIAGSRVETLQGAIDAQKKIVMQANESEVQLRAL
                     EREARAEREQLETFLARYREALARDVENATPPDARIVSRAVVPLAPSFPKKAPIVALV
                     TIATLLLAIGAIVARELLASGSDAPASAWHMAPVRPGPPPSSALAPAPPPRLQPLPQP
                     PTVPDAPPDTRAPDTTGASFQAAEDDSSSDRYNFEALLARLSKSKPQDRGRRILVTSV
                     DKARDAVDMARGLGRILAHNDRAIVVGVDANAAQPNSGPGLTDLVAREASFSDVIGQG
                     AGLRLHFVPLGKRGAEVLHNDQAGVDLALSAFDQTYGWVLCVLGNSGDDALLSLFAPR
                     VDAVVIASNADPASGSLVDLYEKAKTAGAQDVVVAREQAPARSPAETA"
BASE COUNT          546 a         1188 c         1213 g          579 t
ORIGIN      
        1 gcgcgccttc gaaaccgagg gcgtctgctc gccctatcag cgcttcgact gggttcacgc
       61 gttcacgacc gagctggccc cgcgcgacgg gcttcgcgcg cgcatccttc tgctgcgcga
      121 cgaggcgggc cgccctgccc tgttgctgcc gctggtcctg cggcgcagcc gtggcgtgac
      181 gatcgccaca ttcgccggcg gcaagcaggc gaacttcaac ctgccgatcg tcgcgaaggg
      241 cttcgcgtca cgcgtgcccg cgcgcgacat caaaggcctt ctgctcgacg ccgggcgcgc
      301 gctcggagcc gacgtcttcg tgttcgtcaa ccagccgcgc gcatggcgcg gcgaaagcaa
      361 tcccctcgcc tccctcgaca acgtcgccag cccgagccag ggattcaagc tctcgctcgg
      421 ccccaatgcg gatcagacgg tggcccgcgc attcagcagc gagacgcgca agaagatgcg
      481 caagaaggtc agactgctgt ccgagctcgg tgagccgagg ttcctgcagg gccgcacggc
      541 cgcggacgtc gaaaccatcc tggcggcgtt cttcgagcaa aaacaggccc gcttccgcga
      601 tgccggcatc cagaacccgt tcgagggtga ggcgcagaat ttcatccggc gcgcgtgcct
      661 cgccggcctc gaccgcggcg agccggccat cgagctgcat gccatggcca tcggcgagcg
      721 gatcgtcgcg accttcggcg gagctgccga ccgctggcgc ctgtgcggca tgttcaactc
      781 gttcgacacg ggcccggacg tgagccgcca cagtcccggc gagctcctgc tcgcgcagat
      841 catccgcgtg caatgcgagc gaggccatga cgtgttcgat ctcggcgtcg gcgaggcgcg
      901 ctacaagacc tcgctgtgcg acgaggtcga agagctcgtc gacacgttcg tgccggtcac
      961 ggtccgcggc aaggcctacg ccgcggcgac cacgcagctt gtcgcctgca agcgcttcgt
     1021 caagcagacc gcgtggacct ggcgcgcggt caacctgttg cgcggattga aggcgacgct
     1081 gcgcagatcg taggccatca tccggcgcaa gcggggattc ggacgatcga tcccgctctc
     1141 gttgttatcg ggccgcgtga tcccggatca gttccggaca accttttcgg cagagcgcca
     1201 ccgcctgcgg cggctcaagc cgtttccgcc ggcgagcgcg ccggcgcctg ctcgcgcgcc
     1261 acgaccacgt cctgcgcgcc ggccgtcttg gccttctcgt agagatcgac cagcgagccg
     1321 ctcgccgggt cggcgttgga ggcgatgacg accgcgtcga cccgcggcgc gaacaacgac
     1381 agcaacgcgt cgtcgccact gttgccgagg acgcacagaa cccagccata agtctggtcg
     1441 aaggccgaca gcgcgagatc gacgcccgcc tggtcgttgt gcagaacctc ggcgccacgc
     1501 ttgccgagcg gcacgaaatg caggcgcaat ccggcccctt gtccgatcac gtcgctgaac
     1561 gacgcctcgc gcgccacgag atcggtaagc ccgggtccgg aattcggctg cgcggcattc
     1621 gcgtcgacgc cgacaacgat ggcgcggtcg ttgtgcgcaa ggatgcggcc gaggcccctg
     1681 gccatgtcga cggcgtcacg cgccttgtcg acgctggtga cgaggatgcg ccggccgcgg
     1741 tcctgcggct tgctcttgga gagacgcgcc agcagggcct cgaaattgta gcgatcggac
     1801 gagctgtcgt cttcggccgc ctggaagctc gcgcctgtcg tgtcgggggc gcgcgtgtcc
     1861 ggcggcgcgt ccggcaccgt cgggggctgt ggcaacggct gcaggcgcgg cggcggtgcc
     1921 ggtgccagtg cgctcgacgg cggcgggccc gggcggaccg gcgccatgtg ccaggccgat
     1981 gccggcgcat cggagccgga tgcgagcaac tcgcgcgcca cgatggcgcc gatggccagg
     2041 agcagcgtcg cgatcgtcac gagggccacg atcggcgctt tcttcgggaa ggacggcgca
     2101 agcggcacca ccgcgcgcga gacgatgcgc gcgtcgggcg gcgtcgcatt ctcgacgtcg
     2161 cgggcgagcg cttcgcgata gcgcgcgagg aacgtttcaa gctgctcgcg ttcggcgcgg
     2221 gcctcgcgtt caagggcccg aagctgcacc tcgctctcgt tggcctgcat gacgatcttc
     2281 ttctgggcgt cgatggcgcc ttgcagcgtc tcgacgcgcg agccggcgat gcgtgcctcg
     2341 ttctcgagcg cgcgggccgt gcgctcggtg gcgccgcgga tctggctctc gaggtcggcg
     2401 agttgtgcat tgagctcctt gatacgcgga tgctcggaca acagcgtgcg cgcttcgagc
     2461 gccagctgcg cgcgcagggt gacgcgctgc tcgatcagtc gccggatcag ctcgttgttg
     2521 gcgacgtccg ggatctcgaa ggtctgaccg ctccgcacga ggtcgcggat gaggcgagct
     2581 ttcgcctgcg aatcggcatg ggccgagcgc gcctgcgcga gttgcgtgtt gagatcggac
     2641 aggtgctgcg cggtgatcgt ggcgttgttg ccgccgacca gcaagccggt gcgcgcgcga
     2701 aatgcctcga ccttcgcctc ggcctgcgag acgcgcgagc gcagcgagtc gattgccgga
     2761 ccgagccagt tcgacgcggc gcgcgcggtt tcttttttcg atccttccag ccagtcgaga
     2821 tacagctcgg cggcggtgtt ggcgcccttc gcgctcagtt cggcatcctt ggagcggaac
     2881 tcgatcgtga gcacgcgcga gcggcccgtc gggtagacga gcaggtgatc gtaataggcg
     2941 tcgaggacgc gctcctcggg ggcgcggtca taggggtcgc cgccgagacc gagcagcatc
     3001 atgaatcgcc gcaccgggcc gacgcccctg acgagcggat cgaattcagg attgccgacg
     3061 aggccgaggc gcttgacggc ggcgcgcgcg agatcgcgcg acagcacgac ctgcacctgg
     3121 cttgcaaccg cctgctcgtc gatttgcggc gtctgggcct cgcgctcctg tcccgggcgc
     3181 gtataaaaat tttcccggct ttcgagcagc accttcgtct cgccagtgta gcgcggcggc
     3241 acgatgttga cgaagatcag cgcgccgagg aacgccacca gcgtcggcag cacgatccag
     3301 cgtgcgcgca tgatcagcgc ccgccagatc tgcgccagat tgatcgactc gcttcctgga
     3361 tccgcgataa ccccggaccc ggaggacgcg gcgaacggct gaatcatccc tttgcccccg
     3421 gatcacacct catggtgtgc tcgctgaaat tcatttcaat ctcattaagg ttagtagcga
     3481 gttaagactt gaccgaagat gaaccacttg gcggatcaca ggtaat
//
LOCUS       DATAIQ010000521         1913 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_120065, whole genome shotgun sequence.
ACCESSION   DATAIQ010000521 DATAIQ010000000
VERSION     DATAIQ010000521.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1913)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1913)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1913
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_120065"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..231)
                     /locus_tag="VHN20_08635"
     CDS             complement(<1..231)
                     /locus_tag="VHN20_08635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007531937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX2725869.1"
                     /translation="MNPIKVRPAVSADTPALGRLGALLVALHHEFDPDRFIAATRATE
                     QSYASFLDGELTRAHAIVLVAERSGAVLGYAYA"
     gene            579..1037
                     /locus_tag="VHN20_08640"
     CDS             579..1037
                     /locus_tag="VHN20_08640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020173780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEX2725870.1"
                     /translation="MTTFILNGTERRYDGDPDMPLLWYLRDELGLTGTKFGCGVAACG
                     ACTIHLDGTAVRACQTPVSAAEGLAVTTIEGLSPDGNHPVQAAWRDLNVSQCGYCQTG
                     QIMQAAALLKETPNPTDDDIDTAMSGNLCRCGTYPRIRAAIKQASKGARL"
     gene            1034..>1913
                     /locus_tag="VHN20_08645"
     CDS             1034..>1913
                     /locus_tag="VHN20_08645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012335725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEX2725871.1"
                     /translation="MTEHVLDLTGGLVNVSRRTLLAGAGAGVFVLAAGLPTELPAQEK
                     KFGADGMPNGWRDDPTVYIALSDDGAVTVTCHRSEMGQGVRTSIAMVVADELEADWPR
                     VRVAQAPADEERFGNQDTDGSRSLRHWFMPMRRAGAAARTMLEQAAAAQWGVPASEVR
                     AADHAVTHAASGRSLGYGALARAAATLPVPDRGTVRLKEPSAFRYIGKDTIGLVDNRD
                     ITTGKAIYGIDARAEGMLYAVVARPPVYGGKAASYDAADAMKVAGVVKVIAIDAPAIP
                     SEFEPLGGVAVIARNTW"
BASE COUNT          319 a          669 c          644 g          281 t
ORIGIN      
        1 cgcatacgca tagccgagga cggcacccga cctctcggcc accaggacga tcgcgtgcgc
       61 tcgcgtgagc tcgccatcca ggaagctcgc gtagctctgt tcggtggccc gggtggccgc
      121 gatgaagcgg tcggggtcga attcgtgatg caacgccacg agaagcgcgc caagccggcc
      181 gagggccgga gtgtccgcgg aaacggcagg ccgcaccttg atcgggttca tgtggtctca
      241 cggatcattg cgagctccgt ttcatccgga gttctcattc ggcgcgccga tcggcatcat
      301 cgcagttggc cccggagctg cacaagcggc cagtccctga agatcgaagc gtcggcccac
      361 cgtcagtcat gaagcgccat gacctgaaag ggaatggctg cgatcatttc acttcgccgg
      421 tcacggaaac ttgcggtccg cgcgccttgc gtttccgcgc tgaaagcgca gcatcagctg
      481 atcagagcgt ggattcggtt ggcgccggcg acggcaacct tctgtcgaac ggccgcaaca
      541 agcccggacc tcttggaacg ccaagaaggg atacgctgat gacgaccttc atcttgaacg
      601 ggaccgagcg ccgctacgac ggcgatcccg acatgccgct cctctggtac ctgcgtgacg
      661 agctcggcct gacgggcacc aagttcggct gcggcgtcgc ggcttgcggc gcctgcacca
      721 tccatctcga cggcacggcc gtgcgagcat gccagacgcc cgtctcggcg gcggaaggcc
      781 tcgccgtcac gaccatcgaa ggcctctcgc cggacggcaa ccacccggtc caggcggcgt
      841 ggcgcgatct caatgtgtcg caatgcggct attgccagac gggccagatc atgcaggcgg
      901 ccgcgctgct gaaggaaacc ccgaacccga ccgatgacga catcgatacc gccatgagcg
      961 gcaacctgtg tcgctgcggc acctatccgc gcatccgcgc tgccatcaag caggcttcca
     1021 aaggagcgcg cctatgaccg agcacgtcct cgacctcacg ggcggcctcg tcaatgtcag
     1081 ccgccgcacg ttgctcgccg gcgccggcgc cggcgtgttc gttcttgccg caggcctgcc
     1141 gaccgagctg cccgcccagg agaagaagtt cggcgccgac ggcatgccca acggctggcg
     1201 cgacgatccc accgtctaca tcgcgctgtc agacgacggc gccgtcaccg tgacctgcca
     1261 ccgttccgag atggggcagg gcgtgcgcac ctccatcgcc atggtggtcg cggacgagct
     1321 cgaagccgat tggccacgcg ttcgcgtcgc ccaggcgccg gccgacgagg agcgcttcgg
     1381 caaccaggac acggacggct cgcgcagcct gcgtcactgg ttcatgccga tgcgccgcgc
     1441 aggggcggcg gcgcggacga tgctcgagca ggccgccgcg gcgcaatggg gcgttccggc
     1501 atccgaggtt cgggccgccg atcacgccgt cacgcatgcc gcgagcgggc gcagcctggg
     1561 ctacggcgcg ctcgccagag cggccgcgac gctcccggtg ccggaccgcg ggacggtgcg
     1621 gctgaaggag ccgtccgcct tccgctacat cggcaaggac acgatcggcc tcgtcgacaa
     1681 ccgcgacatc accacgggca aggcgatcta cggcatcgac gcccgcgccg aggggatgct
     1741 gtatgccgtc gtcgcgcggc cgccggtcta cggcggcaag gcggcgtcct acgacgccgc
     1801 cgacgcgatg aaggtggcgg gcgtcgtcaa ggtcatcgcc atcgatgcgc cggcgatccc
     1861 gtccgagttc gagccgctgg gcggcgtcgc cgtgatcgcg cgcaacacct ggg
//
LOCUS       DATAIQ010000522         1828 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_335084, whole genome shotgun sequence.
ACCESSION   DATAIQ010000522 DATAIQ010000000
VERSION     DATAIQ010000522.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1828)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1828)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1828
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_335084"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            249..1343
                     /locus_tag="VHN20_08650"
     CDS             249..1343
                     /locus_tag="VHN20_08650"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEX2725872.1"
                     /translation="MLDVGRPRASRGLAVLLGTAAILAVGAGAAHAADAADFYKGKTI
                     DLIISTGPGGGLDHNARIVARHLANHIPGKPIIVAKNMPGAGHLRAANFMHTQAAKDG
                     TVIGTVIPGFLMSQVLDGTGVKFDASKFNWLGSTSYSTQTVYVWKTAKVGSVDEAKKR
                     EVLMGATGAGSYATLYPTVMNNVLGTKFRIVAGYKSSAEVNLAMERGEVEGRAGNNWN
                     SLKAENGEWLKNGSVRLLTQIGLERDPEVGDVPLLLDLARTSEERDLLRFFSADIVLG
                     RPFLAPPGVPADIVAVLRKAFADMMADPAFLKESADSGLDVKPVDGATVQKVVGEIVN
                     APADLVAKAKLAMAPKDVVGGTKAAEGEGR"
     gene            1589..>1828
                     /locus_tag="VHN20_08655"
     CDS             1589..>1828
                     /locus_tag="VHN20_08655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018261278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEX2725873.1"
                     /translation="MGQFGIGQPVRRKEDVRLLTGKGRFTDDINLEGQAFACFLRSPH
                     AHARIVRIDASAVSNEPGIIGVVTGADLAAENLGTL"
BASE COUNT          329 a          589 c          620 g          290 t
ORIGIN      
        1 atgtgattga ttttcgcgaa catcgtttcc tccacgtccc tttgttttgg cgcccttcgg
       61 gcgcacgttt tgggagcgcc tgcgcacccc gatgcaatgc aagatcaggg gctacaaacg
      121 ccggtaggtc gggcgctgtc aaggcgcggc ttgacagcgc ttccacgggc cggagattgt
      181 gcctgccatc ccgaccggga tgacaaagag gccgcgacga agcggcccgc caagttgtgg
      241 aggaaacgat gcttgacgtt ggccgcccgc gcgcctcgcg cgggctcgcg gtgctgctcg
      301 ggacggcggc gattcttgcc gtcggcgcgg gcgccgcgca tgcggcggat gccgccgatt
      361 tctacaaagg caagacgatc gacctgatca tcagcaccgg gccgggcggc ggcctcgacc
      421 acaatgcccg catcgtggcg cggcacctcg ccaatcacat tccgggcaag cccatcatcg
      481 tcgccaagaa catgccgggg gcggggcacc tgcgtgccgc caactttatg cacacgcagg
      541 ccgccaagga cggcacggtg atcggcaccg tgattccggg ttttctgatg tcgcaggtgc
      601 tggatgggac cggcgtcaag ttcgacgcgt cgaagttcaa ctggctcggc tccacttcct
      661 acagcacgca gaccgtctac gtctggaaga cggcgaaggt gggctcagtt gatgaggcga
      721 agaagcgcga ggtgctgatg ggcgccaccg gcgccggctc gtatgcgacg ctctatccga
      781 ccgtgatgaa caacgtgctc ggcacaaaat tccggatcgt cgccggctac aagagcagcg
      841 ccgaagtcaa cctcgccatg gaacgcggcg aggtcgaagg ccgcgccggc aacaactgga
      901 acagcctcaa ggccgagaac ggcgagtggc tcaagaacgg ctccgtccgc ctgctcacgc
      961 agatcggcct cgagcgcgac cccgaggtcg gcgacgtgcc gctgctgctg gatctcgcca
     1021 ggaccagcga ggagcgtgat ctcctgcgct tcttctcggc cgatatcgtg ctcgggcggc
     1081 cgttcctggc gccgccgggc gtccccgcgg acatcgtcgc agtgctgcgc aaggcgttcg
     1141 ccgacatgat ggccgaccct gccttcctca aggaatcggc agactcgggg ctcgacgtca
     1201 aaccggtcga cggcgctacg gtccagaagg tcgtgggcga gatcgtcaat gcgcccgccg
     1261 acctcgtcgc caaggcgaag ctggccatgg ccccgaagga cgtggtcggc gggaccaagg
     1321 cggcagaggg ggaggggcgg tagcgggcgc gctgacaacg ttcgcatcgc gaaccttgtt
     1381 gccgctaacc ctgtcattcc ggggccagcg aagctcggaa cgcggaaccc acgaccgggt
     1441 gagacatcaa cgggatgttg cacgcaatca tgggtccggg ctcggccttc ggccgccccg
     1501 gaatgacagg gttcgttgcc ggcgatagac agcgcggcgg ggagccctta cacgggcgtc
     1561 gagtcataga ggaaagtcac gaggcatcat ggggcagttc gggattggac agccggtcag
     1621 acgcaaggaa gacgtccggc tgctcacggg caaggggcgt ttcaccgacg acatcaatct
     1681 cgaaggccag gccttcgcct gcttcctgcg ctcgccgcat gcccatgcgc gcatcgtgcg
     1741 gatcgatgcg agcgccgtct cgaacgagcc cggcatcatc ggcgtggtga ccggcgccga
     1801 cctcgccgcc gagaacctcg gcacgctg
//
LOCUS       DATAIQ010000523         7196 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_442482, whole genome shotgun sequence.
ACCESSION   DATAIQ010000523 DATAIQ010000000
VERSION     DATAIQ010000523.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 7196)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7196)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7196
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_442482"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            175..1191
                     /locus_tag="VHN20_08660"
     CDS             175..1191
                     /locus_tag="VHN20_08660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011441573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HEX2725874.1"
                     /translation="MIVSRRRLLAAGSTALGGLVAAPFVARAQQAEFSYKYANNLPAT
                     HPMNIRGREMAEAIKAETSGRVEITVFPSNQLGSDTDMLSQLRSGGIEFFTLSGLILA
                     TLVPAASINGIGFAFPDYDAVWKAMDGELGAYVRAQIAKANLVAMDKIWDNGFRQTTT
                     SSKPIVGPDDFKGLKLRVPVSPLWTSMFKALEAAPASINFSEVYTALQTKIVDGQENP
                     LAIIATAKLYEVQRYCSLTNHMWDGFWFLANRRAWERLPQDLQGIVAKHVNAAGENER
                     RDVAKLNASLQDELAGKGMVFNRPDLAPFRDKLRKAGFYAEWKGKYGDEAWAILEKFT
                     GKLS"
     gene            1206..2114
                     /locus_tag="VHN20_08665"
     CDS             1206..2114
                     /locus_tag="VHN20_08665"
                     /inference="COORDINATES: protein motif:HMM:NF022188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2520 domain-containing protein"
                     /protein_id="HEX2725875.1"
                     /translation="MGAGRLATGLAWALAERGAAIAAVTSARGATAQRLASRIPGCQV
                     AATAQDVVDAVDLVFVAVPDDSIRQVAANVRWRPGIAAVHGSGATEVAALEPAARQGA
                     EIGGFHPLQSFGDPDIAVKTLPGCAIAIEADGALRAHLEELATRLDCRPIRLPPGSRA
                     RYHAAAHYAAGFVFALFKEAADVWQTFGVAREDTVAALLPLLRGAAASMEHSGLVQGL
                     PGIFSRGDTGTLRKHLADLGAIGPDALRLYCELGLRSLPLGLERGGLTADRAAEMKAL
                     LLESLRACTPETRAGSADPLRPRDAP"
     gene            2111..3256
                     /locus_tag="VHN20_08670"
     CDS             2111..3256
                     /locus_tag="VHN20_08670"
                     /inference="COORDINATES: protein motif:HMM:NF024771.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mandelate racemase/muconate lactonizing enzyme
                     family protein"
                     /protein_id="HEX2725876.1"
                     /translation="MKITDILIHVLKSPLAEPFAFSQGWVRQRSATLVEVLTDEGLSG
                     WGEAFAQGLEPPEIAATVIDKALRPLVVGADALDTEVLWHRMYHMTRDYGRKGSVVAA
                     ISAVDVALWDIAGKFYGQPVYKLLGGAFRNRVQPYATGFYRIKGQGEAKRLAEEAVRH
                     FDAGFSLMKVKLGYGVDDDIACMREIGRAIQGKPIRLMVDTNHAYGRAEALRLGRALE
                     DYDLRWYEEPVAPEDIHGYAELRSKLAMPIAGGENEHTLYGFREFLAAGAVDIAQPDI
                     GSCGGISAARHVMALAQSHGVQVNPHVWGSAIAQAASLQVIAAVPVAHHSLYAQEPVL
                     EYDRSSHPFRQHLINEPIQQVDGWVDIPSGPGLGVDIDRTTLDRYRI"
     gene            complement(3305..4111)
                     /locus_tag="VHN20_08675"
     CDS             complement(3305..4111)
                     /locus_tag="VHN20_08675"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX2725877.1"
                     /translation="MTTSHIPSAAPARLEVRDVSKTFVRRRGFWATPLKTAALAGVSL
                     AVDAGEILGVVGESGSGKTTLGRIIVGLETANGGTITLGERVLASGRMHVPAAARGIG
                     MIFQDPYSSLNGRMRVRDIVGEGLRIAGRAGAREIDERVDAALSMVGLRQADRERYPH
                     QFSGGQRQRIGIARAIVMEPRLLIADEAVSSLDVSVQMQVLNVLLDIREKLGLALMFI
                     THNIGVVEYLCDRVVVLARGEIVESGQTRMVIGAPQHAYTQKLIEAVPRL"
     gene            complement(4108..5133)
                     /locus_tag="VHN20_08680"
     CDS             complement(4108..5133)
                     /locus_tag="VHN20_08680"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2725878.1"
                     /translation="MSEPLAATIPLAGPAPGAASRAPVLEARNLGLHLRQSGRELKIV
                     DDISFTIAPGEFFALIGESGSGKTMIARAVMRLLPSRKLRIAGRLAIEGIDVATAPER
                     EMEKLRGRRVSMIFQEPMSSLNPIMTVQEQLDEALCVHGLYTRAERRERIAQILADVR
                     FADPRQVAAMYPHELSGGMRQRAMIAMALCNDPTLLIADEPTTALDVTIQREIMEILF
                     RLRERYNLSVLFISHDLALVYRYADTIGVLYGGVLMEQGPIRQVIETPTHPYTAALLA
                     CMPRYRAAGERQAGIEGNVPRVDDWFTGCRFAPRCPRRQEVCTHGEVALAPVRPGQAA
                     RCLFPLT"
     gene            complement(5126..5968)
                     /locus_tag="VHN20_08685"
     CDS             complement(5126..5968)
                     /locus_tag="VHN20_08685"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX2725879.1"
                     /translation="MMQGWRFADIKFVVGALCVGTVAALAVFGDFLATHSPTEQSLID
                     SLMPPFDFAGGHPLGTDQLGRDILARMVSGARVSLTIAATVVAISGVFGVLVGAVSGY
                     LGGTRDIVVQKIVETFWAFPAILLAIAVVALFGQTLPNLIIALTLQRWIPYARLSRAQ
                     ALSLRSREFVAASKIMGGSVPWILRHHILPNLVASSIVIATFSMATAIIAEASLSFLG
                     LGVPPGTPTWGGMLAEGRSYITRAWWLAVLPGLGIFITVLGLNLLGDWLRDQFDPKDD
                     LNLV"
     gene            complement(5965..6972)
                     /locus_tag="VHN20_08690"
     CDS             complement(5965..6972)
                     /locus_tag="VHN20_08690"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX2725880.1"
                     /translation="MIRSILLRIAGAVPVLLLVACGIFALLRLAPGDAATLLVPEDAP
                     DEEVQRLRELWGLDESLPVQFGRFLLSLARLDLGLSLRYQAPVLDLIAERLPATFELA
                     LVTLLFAVLIGVPLGLFAALHKGKLGDGAVSLIAVAGVSAPSFWVGILLVLFLSANLN
                     LFPSSGRLPFGVPITETTGFFLIDSLMHGQFDTFRQVVAHLFLPALTLAAGMVGIIAR
                     ITRSAVVDVGQEEFIFTAVAKGLNRRQIVRRHLVPNAAIPISTIIGLELGVLISGTII
                     VEVIFSWPGVGTLLYQAVTVRDTPLTAGVVVVYTGLFIFLNLLIDLFYFVVDPRLRAA
                     A"
BASE COUNT         1239 a         2391 c         2477 g         1089 t
ORIGIN      
        1 cggacatccg ccgcctttcg gagtgggtcc aaaaggagat gctggctttg actgccgccg
       61 acgaccggca cgaaacagct ggccctctgg accgtacgct gtcgccctcg ctacctttga
      121 cctgaagcaa agcaacaggc gggcgccttc ggcgcccgca cccgggagga ttacatgatc
      181 gtgtctcgtc gtcgcctgct cgccgcgggt tccacggctc tcggcgggct cgtggcagcg
      241 ccgttcgttg cgcgcgctca gcaggcggag ttttcctaca aatacgccaa caacctgccg
      301 gccacgcacc ctatgaacat ccgcggccgc gagatggcgg aggcgatcaa ggcggagacg
      361 agcgggcgcg tcgagatcac cgtcttcccg tccaaccagc ttggttccga caccgacatg
      421 ctcagccagc ttcgctcggg cggcatcgag ttcttcaccc tttccggatt gatcctcgcg
      481 accctcgtgc ctgcggccag catcaacggc atcggcttcg cctttcccga ctacgacgcc
      541 gtgtggaagg ccatggatgg cgagctgggc gcctatgtgc gcgcgcagat cgccaaggcg
      601 aacctcgtcg ccatggacaa gatctgggac aacggtttcc gccagaccac aacgtcgagc
      661 aagccgatcg taggccccga cgatttcaag ggcctgaagc tgcgcgttcc ggtgagcccc
      721 ctctggacat ccatgttcaa ggcgctcgag gcggcgccgg cctcgatcaa tttttccgag
      781 gtctacaccg cattgcagac caagattgtg gacggccagg agaacccgct cgccatcatc
      841 gccaccgcga agctctacga ggtgcagagg tattgctcgc tcacgaacca catgtgggat
      901 ggcttctggt tcctggcgaa ccgccgcgcg tgggagcggc tgccccagga cctgcagggc
      961 atcgttgcca agcacgtcaa cgcagcgggc gagaacgagc gccgcgacgt cgccaagttg
     1021 aatgcctctt tgcaggatga gctcgccggc aagggcatgg tgttcaaccg ccccgacctc
     1081 gcgccgttcc gcgacaagct gcgcaaggcc ggcttctatg cggaatggaa aggcaaatac
     1141 ggcgacgagg cgtgggccat cctcgagaag ttcacgggta agctgtcctg aatcgtatcg
     1201 gcttcatcgg cgccgggcgc ctggcgacgg gtctcgcctg ggcgttggcg gaacgtggtg
     1261 ccgcgatcgc cgcagtgacc agcgcgagag gcgccacggc gcagcggctc gccagccgga
     1321 tccccggctg ccaggttgcc gcgacggcgc aggacgtcgt cgacgcggtt gacctcgtct
     1381 tcgtcgccgt ccctgacgac tccatccgcc aagtcgccgc gaacgtgcgc tggcgccctg
     1441 gcatcgcagc cgtgcatggc agcggcgcga ccgaggtcgc cgcgctggaa ccggccgcgc
     1501 ggcaaggcgc cgagatcggc ggctttcatc cgttgcagtc gttcggcgat cccgacatcg
     1561 ccgtgaagac cctgcccgga tgcgccatcg ccatcgaggc cgacggcgcc ttgcgggcgc
     1621 atctcgagga actcgcgacg cgcctggatt gccggccgat ccggctgcct ccgggcagcc
     1681 gcgcccgcta ccacgccgcc gcccattatg cggccgggtt cgtcttcgca ctcttcaagg
     1741 aagctgcgga tgtctggcag accttcgggg tcgcgcgcga ggacacggtc gcggccctgc
     1801 tgccgctgtt gcgcggagca gccgcgtcga tggagcattc cgggctggtg cagggattgc
     1861 ccggcatctt ctcgcgcggc gataccggca cgttgcggaa gcaccttgcc gatctcggcg
     1921 ccatcggtcc cgatgcactg cggctgtatt gcgagctcgg cctgcgctcg ctcccgctcg
     1981 gtcttgagcg cggcggtctg actgcggacc gggccgcgga gatgaaagct ctgctcctgg
     2041 aatcgctccg cgcttgcacg cccgagacga gggcaggatc ggccgatcca ctgaggccga
     2101 gagacgcgcc atgaagatca ccgatatcct catccacgtc ctcaagagtc cgctcgcgga
     2161 accgttcgca ttctcgcagg gctgggtgcg acaacgttcg gccacgttgg tggaggtgct
     2221 caccgacgaa ggcctgagcg gctggggcga agcgttcgcg cagggactgg agccacccga
     2281 gatcgcagcg accgtgatcg acaaggcgtt gcggccgctc gtcgttggcg cagacgcgct
     2341 cgacacggag gtattgtggc accggatgta ccacatgacg cgcgactacg gccgcaaagg
     2401 ctctgtcgta gcggcgatca gcgccgtcga cgtcgcgctc tgggacatcg cgggaaagtt
     2461 ctatggtcag ccggtctaca agctgctggg cggggccttc cgcaatcgcg tccagcccta
     2521 tgccaccggc ttttatcgca tcaaggggca gggcgaagcc aagcgtctcg ccgaggaggc
     2581 ggtccgccat ttcgacgccg gcttctcgct gatgaaggtg aagctcggct acggcgtcga
     2641 tgacgacatc gcctgcatgc gcgagatcgg acgcgccatc caggggaagc cgatcaggct
     2701 gatggtcgac acaaatcacg cctatggccg cgccgaagcg ctgcggctcg ggcgcgccct
     2761 cgaggactac gatttgcgct ggtacgagga gccggtcgcg cccgaggaca tccacggtta
     2821 cgccgagctg cggagcaagc tcgcgatgcc catcgccggc ggtgagaacg agcacacgct
     2881 ctacggcttc cgtgagtttc tggccgccgg ggcggtggac atcgcccagc ccgatatcgg
     2941 ctcgtgcggt ggcatctccg cggcgcgcca cgtgatggcg ctggcgcagt cgcacggggt
     3001 gcaggtgaac ccgcatgtat ggggctcggc catcgcccag gcggcatcgt tgcaggtgat
     3061 tgccgctgtc ccggtggcgc atcactcgct ctacgctcag gagccggtcc tcgaatacga
     3121 ccgctcctcc cacccgttcc ggcagcatct gatcaacgag ccgatccagc aggtcgatgg
     3181 ctgggtcgac atcccgtccg ggcccggcct cggcgtcgac atcgaccgga cgacgcttga
     3241 ccgctatcgc atctgacatg cgcggctgcg ctggctcacg ccggcggagc gccgggcgct
     3301 tgcgtcagag gcgggggacc gcttcgatca gcttctgcgt ataggcgtgc tgcggcgccc
     3361 cgatcaccat ccgcgtctgg ccgctctcga cgatctcgcc gcgcgccagc acgacgacgc
     3421 ggtcgcacag atactcgacc acgccgatat tgtgggtgat gaacatgagc gcgaggccga
     3481 gcttctcgcg gatgtcgagc aggacgttga gcacctgcat ctgcaccgag acatcgagcg
     3541 aggagacggc ctcgtcggcg atcaggaggc gaggctccat cacgatcgct cgcgcgatgc
     3601 cgatgcgctg acgctggccg ccgctgaact ggtgcggata gcgctcgcga tccgcctggc
     3661 gcagaccgac catcgacagc gccgcgtcga cccgctcgtc gatctcgcgg gcgccggctc
     3721 gcccggcgat gcgcaggccc tcgccgacaa tgtcgcgcac gcgcatacgc ccgttgagcg
     3781 acgagtaggg atcctggaag atcataccga tgccgcgggc cgccgccgga acgtgcatgc
     3841 ggccggaggc gaggacccgc tcgccgaggg tgatcgtgcc gccattggcc gtctcgaggc
     3901 cgacgatgat gcgcccaagc gtcgtcttac ccgagcccga ctcgccgacg acgcccagaa
     3961 tctctcccgc gtcgaccgcg agcgacacgc cggcgagagc cgccgtcttg agcggcgtcg
     4021 cccagaaacc gcgccggcgc acgaacgtct tgctgacgtc gcgcacctcg agccgcgccg
     4081 gcgcagcgga tggaatgtgc gacgtcgtca tgtgagcgga aacaggcagc gcgctgcctg
     4141 gccgggccgc accggcgcga gcgcgacctc gccatgcgtg cacacctcct gccggcgcgg
     4201 gcagcgcggg gcgaagcggc atcctgtgaa ccagtcgtcg acacgcggca cgttgccctc
     4261 gatgccggcc tgacgctcac cagcggcgcg gtagcgcggc atgcaggcga ggagcgccgc
     4321 ggtataagga tgcgtgggcg tctcgattac ctgcctgatc gggccctgct ccatcagcac
     4381 gccgccgtag agcacgccga tggtgtcggc gtagcgataa accagcgcga ggtcgtgcga
     4441 gatgaacaaa acagagagat tgtagcgctc gcgcaggcgg aacaggattt ccatgatctc
     4501 gcgctggatg gtcacgtcga gcgccgtggt cggctcgtcg gcgatcagca acgttggatc
     4561 gttgcacagc gccatggcaa tcatcgcgcg ctggcgcatg ccgccggaca gctcgtgcgg
     4621 atacattgca gcgacttggc gcggatcggc gaagcgcacg tccgcgagga tttgggcaat
     4681 gcgctcgcgc cgctcggcgc gggtgtagag cccgtgcacg cacaacgcct cgtccagctg
     4741 ctcctgcacg gtcatgatcg ggttgagcga gctcatcggc tcctggaaga tcatgctgac
     4801 gcggcgccca cgcagcttct ccatctcccg ttccggagcc gtggcgacgt cgatgccctc
     4861 gatcgccaga cggccggcga tgcgcagctt gcgcgacggc aggaggcgca tgacggcgcg
     4921 ggcgatcatg gtcttgcccg acccgctctc gccgatcagc gcgaagaact cgccgggcgc
     4981 gatggtgaag ctgatgtcgt cgacgatctt cagctcgcgc ccgctctggc gcaggtggag
     5041 cccgagattg cgcgcctcga gcaccggcgc tcgggacgcg gccccgggcg caggacccgc
     5101 gagggggatg gtggcggcga gcggctcaga caaggttgag atcgtccttc gggtcgaact
     5161 ggtcgcgcag ccaatcgccc aggaggttga ggccgagcac ggtaatgaag atgccgagcc
     5221 ccggcagcac cgcgagccac caggcgcggg tgatatagga gcgcccttcc gcgagcatgc
     5281 cgccccaggt tggcgtgccg ggcggcaccc cgagaccgag gaagctgagg ctcgcctcgg
     5341 cgatgatggc cgtagccatg ctgaaggtgg cgatcacgat cgacgaggcg acgaggttcg
     5401 gcaggatgtg gtggcgcagg atccagggca cgctcccgcc catgatcttc gacgcggcga
     5461 cgaattcgcg cgagcgcagc gacagcgcct gggcgcggga caggcgcgca tatgggatcc
     5521 agcgctgcag cgtcagcgcg atgatcaggt tgggcaaggt ctggccgaac agggcgacca
     5581 cggcgatggc gagcaggatc gcggggaacg cccagaacgt ctcgacgatc ttctgcacca
     5641 cgatgtcacg cgtgccgccg agatagcccg agacggcgcc gaccagcacg ccgaacacgc
     5701 cggagatcgc caccaccgtg gccgcgatgg tcagcgacac gcgcgcgccc gacaccattc
     5761 gggcgaggat gtcgcggccg agctggtccg tgccgagggg gtgcccgccg gcgaagtcga
     5821 agggtggcat cagggagtcg atcaggctct gctcggtcgg gctgtgcgtg gcgaggaaat
     5881 cgccgaacac ggcgagcgcg gcgaccgtgc cgacgcacag ggcgccgacc acgaacttga
     5941 tgtcggcgaa gcgccagccc tgcatcatgc ggccgctcgc aggcgcggat cgaccacgaa
     6001 gtagaacagg tcgatcagga ggttcaggaa gatgaacaag ccggtataga cgaccacgac
     6061 gccggccgtg agcggcgtgt cgcgcacggt gacggcctgg tagagcagcg tgccgacgcc
     6121 gggccaggag aagatcacct cgacgatgat ggtaccgctg atcaggacgc cgagctcgag
     6181 gccgatgatg gtggagatcg ggatggcggc gttcggcaca aggtggcggc ggacgatctg
     6241 gcgccggttc aggcctttgg ccaccgcggt gaagatgaac tcttcctggc cgacgtcgac
     6301 cacggccgag cgcgtgatgc gtgcgatgat accgaccatg ccggccgcca gcgtcagcgc
     6361 cggcaggaac aggtgcgcga cgacctgccg gaacgtgtcg aactggccgt gcatcaggct
     6421 gtcgatcagg aagaagccgg tcgtctcggt gatcggcacc ccgaatggca ggcggccgct
     6481 cgacggaaac aggttcagat tggccgacag gaacaggacc agcaggatgc cgacccagaa
     6541 ggaaggcgcg ctgacgccgg cgaccgcgat cagcgagacg gcaccgtcgc cgagcttgcc
     6601 cttgtgcagc gccgcgaaca gtccgagcgg cacgccgatg agaaccgcga acaacagcgt
     6661 gacgagcgca agctcgaacg ttgccggcaa gcgctcggcg atcaggtcga gcaccggcgc
     6721 ctggtagcgc agcgacaagc cgagatcgag gcgtgccagg ctcaggagaa agcggccgaa
     6781 ctggaccggc agcgactcgt cgagccccca cagctcccgc agccgctgca cctcctcgtc
     6841 cggggcatct tccggtacca gcagcgtggc agcgtcgccg ggggcgaggc gcagaagcgc
     6901 gaagatgccg caggcgacca gcaggagcac gggaacggcg ccggcgatcc gcaggaggat
     6961 gctgcggatc atcggccggc gctctcacga aatctggatt ggcgccccgt cgcagccgta
     7021 gtcccgagca tgtctcgttt cgacaaagtg cgtggcccta ggtcatcttc acccgcgaca
     7081 gccagacctc gccgttggcg tcggctctcc aggtcacgcc tttgcggacg ccgtgcacga
     7141 gcttgtgcgt ccacatgaac acggccggca cgtcctcggc gagcttgtcg ttgatg
//
LOCUS       DATAIQ010000524         3618 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_442545, whole genome shotgun sequence.
ACCESSION   DATAIQ010000524 DATAIQ010000000
VERSION     DATAIQ010000524.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3618)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3618)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3618
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_442545"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..666)
                     /locus_tag="VHN20_08695"
     CDS             complement(<1..666)
                     /locus_tag="VHN20_08695"
                     /inference="COORDINATES: protein motif:HMM:NF012573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005509 - calcium ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HEX2725881.1"
                     /translation="MLFGDLDDVVMTTVTTGNDRILSGISGVQTLIGDVVTVTDGTLQ
                     AGHDLLDSRRLAGGRSVLTGDVDIATVSTSLTSVDAGADRLYGSLTLGDTIVGDVREL
                     TGVLLEAGNDRIHGGGGNDRIYGDVAAAHGTDIGVSSGSFGVLNLEGGADTLAGEDGN
                     DLIYGDVGNFDDFTGSLRARLQGNCDAISGGRGDDTIFGDAGSIVGIGNGGNDVIRGD
                     AGND"
     gene            complement(807..1097)
                     /locus_tag="VHN20_08700"
     CDS             complement(807..1097)
                     /locus_tag="VHN20_08700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008195792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725882.1"
                     /translation="MNITREDCIGLCGLDEAEIAAIGEHEHVGDVAAAALADYLLHRD
                     GGAAKIRDMMVDDLRTALKRHDRQHARELFMALRHFVGEHREELAKSRRAPA"
     gene            complement(1124..2986)
                     /locus_tag="VHN20_08705"
     CDS             complement(1124..2986)
                     /locus_tag="VHN20_08705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015927164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX2725883.1"
                     /translation="MPLDNTAAVTTASEPERGRIIPLRSMTGAKAKAAGGAAGVPGST
                     AETALANFGGTLDRAFHATLARATGGLSPAALAGAYLDWAAHLSLSPGKQVQLAEKAY
                     RKWMRLAHYCACCALDASAAPCIEPLPQDKRFAAPEWKTWPYNLVYQSFLLQQQWWHN
                     ATTGVDGVTRQHERAVEFASRQVLDLFAPSNFVATNPVVLKHTLDKGGANLVRGFDNW
                     VEDWLRATGGKPPTGVETFQVGRDLAVTPGKVVYRNRLMELIQYAPQTEHVRPEPILI
                     VPAWIMKYYILDLSPSNSLVRYLVGQGFTVFMISWKNPTAEDRDLGLEDYRTLGVVAA
                     LEAVTTIVPNQTVHAAGYCLGGTLLSIAAAAMARDADRRLRSISLFAAQADFEEAGEL
                     TMFINESQVHFIEDLMWQQGYLDARQMAGAFQLLRSNDLIWSRWVRTYLMGEREAMFD
                     LAAWNADATRMPYRMHSEYLKKLFLNNDLAEGRYSVAGRAIALSDIRVPIFAVGTDRD
                     HVAPWRSVYKVHILSDAEVTFVLTEGGHNAGIVSPPTRPSSYRVLTRRADDRYLEPSA
                     WVSSAPNQAGSWWLEWIRWLDQRSGIGCPPPETGAAEAGYPVLADAPGDYVLHG"
BASE COUNT          645 a         1164 c         1162 g          647 t
ORIGIN      
        1 gtcgttgccg gcgtcgccgc ggatgacgtc attgcccccg ttgccgatgc cgacgatgct
       61 cccggcatcg ccgaagatgg tgtcgtcgcc gcgcccgccg ctgatcgcgt cgcagttgcc
      121 ctgtagcctg gcgcggagcg agccagtgaa gtcatcgaaa tttcccacgt ctccgtagat
      181 gagatcgttg ccgtcctcgc ccgcgagcgt atcggcgcca ccttccaggt tgaggacacc
      241 aaaggaaccg ctgctgacgc cgatgtcggt gccgtgcgca gcggccacgt cgccataaat
      301 tcgatcgttg ccgccgccgc catgaatccg gtcgttcccg gcttccagca gcactccggt
      361 caactcgcgc acatcgccga cgatcgtgtc tccaagcgtg agcgagccat agaggcggtc
      421 ggccccggcg tcgaccgacg tgagcgaagt ggacacggtg gcgatgtcga catcgcccgt
      481 gagcacgctt cgcccgcccg ccagcctgcg gctgtcgagc aggtcgtgcc cggcttgaag
      541 cgtgccgtcc gtgaccgtca cgacatcgcc gatcagcgtc tggacgccgc taatgccgct
      601 caggatgcgg tcgttgccgg tcgtcaccgt cgtcattacg acgtcgtcga ggtcgccgaa
      661 cagcacgatg tcgccaacgg caggagcgtg gagcagatcg ttacccaggg tcgccatatc
      721 tgatctcccg tgtacgaagg cggcgagtca catcgccatc gcggaaatgg gcgcgagaaa
      781 cttccacccg acgtgcagga gcggtctcac gccggtgctc tccgcgattt cgccaattcc
      841 tcccggtgct cgcccacgaa gtgccggagg gccatgaaga gctcacgggc atgttggcga
      901 tcgtgccgct tcaaggccgt acgaagatca tccaccatca tgtccctgat cttcgctgca
      961 ccaccgtccc gatgaagcag gtagtcggcc agggccgccg cagcgacgtc gcccacatgc
     1021 tcgtgctcac cgatggccgc gatctcggcc tcgtcgaggc cgcataagcc aatgcaatcc
     1081 tcccgtgtga tgttcatgac ggtcctcctc tggcgagatc tcgctagcca tgcagaacgt
     1141 aatcacctgg ggcatccgcc aggacaggat agccggcctc cgcagcgccc gtttccggcg
     1201 gagggcaacc tatgcccgag cgctgatcga gccagcggat ccactccagc caccaggaac
     1261 cagcctggtt gggcgcgctc gatacccatg cggacggctc gagataccgg tcgtcggccc
     1321 gtctcgtcag cacccgatag ctgctcgggc gcgttggcgg cgatacgatg ccggcattat
     1381 ggccgccctc cgtgagcaca aaggtgacct cggcgtcgct taggatgtgc accttgtaga
     1441 ccgagcgcca aggcgcgacg tggtcgcgat cggtgcccac ggcgaagatc gggacacgga
     1501 tatcggaaag cgcaatcgcc ctcccggcga cggagtaacg gccctcggcg agatcgttgt
     1561 tcagaaaaag cttctttaga tattcggaat gcatgcgata gggcattcgc gtcgcatcgg
     1621 cattccacgc cgccagatcg aacatcgcct cgcgctcgcc catgagatag gtgcgcaccc
     1681 atcgcgacca gatcagatcg ttggagcgca gcagctggaa ggcgcccgcc atctgccgtg
     1741 cgtcgaggta gccctgctgc cacatcaggt cctcgatgaa gtggacctgg ctttcattga
     1801 tgaacatcgt gagctcgccc gcctcctcga aatcggcttg agcggcgaac aggctgatcg
     1861 accgaaggcg tctgtcggcg tcgcgggcca tggcggccgc ggcgatggat agaagcgtgc
     1921 ccccgagaca gtagccggct gcgtgcaccg tttggttcgg cacgatggtc gtcacggctt
     1981 cgagggccgc cacgaccccg agcgtgcggt aatcctccag gccgaggtcg cgatcctccg
     2041 cggtggggtt cttccatgag atcatgaaga ccgtgaaccc ttgcccgacg aggtagcgga
     2101 cgagcgagtt cgacggcgag aggtccagga tgtaatattt catgatccag gcaggcacga
     2161 tcaggatcgg ctccggccgc acatgctcgg tctgcggcgc gtattggatc aactccatca
     2221 ggcggttgcg gtagaccacc ttccctggcg tgaccgccag gtcacgcccg acctgaaagg
     2281 tctcgacgcc cgtgggcggc ttcccgcccg tcgcgcgcag ccagtcctcg acccaattgt
     2341 cgaagccacg gacgagattg gctccgcctt tgtcgagcgt gtgcttcagg actaccggat
     2401 tcgtggcgac gaagttggac ggcgcgaaca aatcgaggac ctgacgcgat gcgaactcga
     2461 cggccctctc gtgctgcctc gtgacaccgt cgacgccggt cgtcgcattg tgccaccact
     2521 gctgctgaag caggaatgat tgatagacga gattgtaggg ccaggttttc cattccggcg
     2581 ccgcaaaacg cttgtcctgc ggtaagggtt cgatgcaggg cgctgccgag gcgtccagcg
     2641 cgcagcaggc gcaatagtgg gcaagccgca tccatttgcg ataggctttt tcggcgagct
     2701 gcacctgctt tccgggcgag agcgagagat gcgccgccca gtcgagatag gcgccggcca
     2761 gggccgccgg cgaaaggcct ccggtggcgc gtgccaacgt cgcgtgaaag gcacggtcga
     2821 gggttcctcc gaagttcgcg agggcagtct ctgcggtact gcccggcacc ccagcggcgc
     2881 ccccagcagc cttggccttc gcgcctgtca ttgagcggag gggaatgatc cggccgcgtt
     2941 ccggttccga cgccgtcgtg accgccgccg tgttgtcgag gggcatcagg caatctccgc
     3001 ttggtcacgc tatcgcgtgc tagccacgat acgcatgatc cagatcaagt ctgtgcgaag
     3061 gatgcctggg ttcgatttga tcttgatcaa acccggccgt ccacctcgtc gatacggtca
     3121 agctaagggc gatgaggatt ggccatgtcg cgatccgcgg acggggtgga gcgaggcgtt
     3181 cccgcagccg acgagcctca gaggattgct ctcctggtga atatgatccg ggcctacggc
     3241 ctcgatccag ccgaaattga gcacgcccat ccggtcgtca tgcgggcttt gagaaccgga
     3301 tgcacgctat gcgcgctcac caatcaatgc atgcgatcgc gcagagagcg cgcggtgacg
     3361 accgccgggg cggcgttttg cttgaacgcg ccggtgttga aggcgctcga cgattacgag
     3421 tgcatagcga ggaccgcacc agagcatccg ccgacaagga tcggcaacgc gccgtgagga
     3481 tcaggtcagc gttgctcgtt acccgcgcag gtcgggaccg tgcagtcgcc ctggtcgaga
     3541 cggcgagggc cgaagtgttg cccagacgag cgggtcagtg actcgcctgc aaacttcggc
     3601 gggcgttctt gccggcat
//
LOCUS       DATAIQ010000525         4056 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_27107, whole genome shotgun sequence.
ACCESSION   DATAIQ010000525 DATAIQ010000000
VERSION     DATAIQ010000525.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4056)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4056)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4056
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_27107"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            3..1274
                     /gene="tolB"
                     /locus_tag="VHN20_08710"
     CDS             3..1274
                     /gene="tolB"
                     /locus_tag="VHN20_08710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018260305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Tol-Pal system beta propeller repeat protein
                     TolB"
                     /protein_id="HEX2725884.1"
                     /translation="MLPTVPAQAELVVDVRRGNFQPMPIAIADFTGEGDLGQRVAAVI
                     ANNLKRSGYFAPIDKAQFPEKQPAFDSAPQFAAWRAAGVQGLVTGRVSRDAAGRFKTE
                     FRLWDVLAGQQIAGQQYFTDPSLWRRVGHIISDAVYSKVTGLGGFFDTRVVFVDESGP
                     KENRRKRLAIMDQDGANVRFLTQGDQLVVTPRYSPASQDITYMSQSLGQQPRVQVINL
                     DTGSRQVVGNFPDMTSSPRFSPDGQKIVMSLQQGGNSNIYVMDLASRTTTRITSTSAI
                     DTSPSFAPDGSQIAFESDRGGQQQIYVMGGDGSSPRRISFGEGSSYSQPAWSPRGDYI
                     AFTKRARGGFAIGIMRPDGSGERILTEGFHNESPTWSPNGQYIMFFRDPGGQAGGKLY
                     MVDVTGRVEVPVPTPSFASDPTWSPLLTDGR"
     gene            complement(1327..2391)
                     /locus_tag="VHN20_08715"
     CDS             complement(1327..2391)
                     /locus_tag="VHN20_08715"
                     /inference="COORDINATES: protein motif:HMM:NF020137.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005509 - calcium ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HEX2725885.1"
                     /translation="MATIIGNNSVNVLTGTNGRDVLKGLGGNDTLRGLGGPDLLDGGT
                     GIDTMLGGLGNDTYIVDTRSDVVVEDAGGGIDRVLSSVSYALRPNVENLTLTGVAAIA
                     GTGNGLSNVITGNNANNILSGLAGNDTLLGRAGHDRLDGGAGNDRMIGGLGNDVYRVN
                     AGDVVVEAPSGGIDRIESSISFNLTATPHVENLTLLGAAFFGFGNNLNNVIIGTTAGN
                     ALSGGFGNDILIGGLGGDSLAGGPGADIYRYRSVAESATPFPDSIDLVSFQGDKIDLS
                     AIDANVLVSGNQAFRFIGETAFTRPGQVNFATEIDFMTFTSRTTISANVDADAAPEFI
                     LTIPSFTIIPTIPTASDFIL"
     gene            complement(2731..3735)
                     /locus_tag="VHN20_08720"
     CDS             complement(2731..3735)
                     /locus_tag="VHN20_08720"
                     /EC_number="2.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018457182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0018104 - peptidoglycan-protein
                     cross-linking [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HEX2725886.1"
                     /translation="MLAVVSLCAGIACAAAQGLTADAVNNATFSADARNAKTGAKVGK
                     GPSPALVKAQVLLDRSRFSPGMIDGRTGDNLRKALAAFAQEHGVKAAGELNQDVWTKL
                     TESSGEPAVIEYTISDADVKGPFAEKIPARMEDMAKLDRLGYTSAQELLAEKFHASAD
                     LLTALNPGKRFDEAGTRIVVPNVLASQGEKSDKSDKGNVARIEVEKGARALKVLDKGG
                     KLLAFYPASIGSTDKPAPSGDFTVRAVAENPTYTYDPKFGFKGVKAKEKLTIKPGPNN
                     PVGAVWIDLSLETYGIHGTPEPEKVGKSFSHGCVRLTNWDAKELAAMVQKGTKVTFVE
                     "
     gene            complement(3830..>4056)
                     /locus_tag="VHN20_08725"
     CDS             complement(3830..>4056)
                     /locus_tag="VHN20_08725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012634307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="extensin family protein"
                     /protein_id="HEX2725887.1"
                     /translation="FANAIDISGFDFGRKNVQIGDHPAETAPALFQAAIRSQACAYFT
                     TVLGPGSDAAHATHLHLDLRGRKGNHRICQ"
BASE COUNT          636 a         1339 c         1343 g          738 t
ORIGIN      
        1 tcatgctgcc gaccgtcccg gcgcaggccg agctcgtggt cgatgtgcgc cgcggcaact
       61 tccagccgat gccgatcgcc atcgccgatt tcaccggtga aggcgatctc ggacagcggg
      121 tcgcggccgt catcgccaac aacctcaagc gctccggcta cttcgcgccc atcgacaagg
      181 cgcagtttcc ggagaagcag ccggccttcg attcggcgcc gcagttcgcc gcctggcgcg
      241 cggccggggt gcagggtctc gtcaccggcc gcgtgtcgcg cgacgcggca ggccggttca
      301 agaccgagtt ccggctgtgg gacgtgctcg ccggccagca gatcgccggg cagcaatatt
      361 tcacggatcc gagcctgtgg cgccgggtcg ggcacatcat ctcggacgcg gtctacagca
      421 aggtcacggg cctcggcggc ttcttcgaca cccgcgtggt cttcgtcgac gaatccgggc
      481 cgaaggagaa ccggcgcaag cgcctcgcca tcatggacca ggacggcgcc aacgtgcgct
      541 tcctgacgca aggcgaccag ctcgtggtga cgccgcgcta ttcgccggcc tcgcaggaca
      601 tcacctacat gtcgcagagc ctcgggcagc agccgcgtgt gcaggtcatc aacctcgaca
      661 ccggctcccg gcaggtggtc ggcaacttcc ccgacatgac gtcgagcccg cgcttctcgc
      721 cggacggcca gaagatcgtc atgagcctgc agcagggcgg caactcgaac atctacgtga
      781 tggacctcgc cagccgcacg acgacgcgca tcacctcgac ctcggcgatc gacacctcgc
      841 cctcgttcgc gcccgacggc agccagatcg cgttcgagag cgaccgcggc ggccagcagc
      901 agatctacgt gatgggcggc gacggctcga gcccgcgccg catctcgttc ggcgaaggct
      961 cctcctattc gcagccggca tggtcgccgc gcggcgacta catcgccttc accaagcgcg
     1021 ccaggggcgg cttcgccatc ggcatcatgc ggccggacgg ctccggcgag cgcatcctga
     1081 ccgagggttt tcacaacgaa agcccgacct ggtcgcccaa cgggcaatac atcatgttct
     1141 tccgcgaccc gggcggacag gccggcggca agctctacat ggtcgacgtg accggccgcg
     1201 tcgaagtgcc ggtgccgacc ccgtccttcg cgtccgaccc gacctggtcg ccgctgctca
     1261 ccgacggccg ctgacgcctc ggctgcccct tcgggcgagc gtgcggggtt cgcgcccctc
     1321 gctcgcctag aggataaagt cgctcgccgt cgggatggtc gggatgatcg tgaagctcgg
     1381 aatcgtcaat atgaattccg gcgcggcatc ggcgtcgacg ttggcggaga tcgtcgtgcg
     1441 gctggtgaaa gtcataaagt caatttcggt ggcgaaattc acctggccgg gccgggtgaa
     1501 cgccgtctcg ccgataaatc tgaaagcctg gttgccggaa accaggacat tggcgtcgat
     1561 ggccgaaaga tcgatcttgt cgccttggaa agaaacgagg tcgatgctgt ctggaaacgg
     1621 cgtcgcgctc tcggcaacgc tgcggtagcg gtagatgtcg gcgccggggc cgccggcgag
     1681 gctgtcgccg ccgagcccgc cgatcagaat gtcgttgccg aagccgccgc tgagcgcgtt
     1741 gccggcagtg gtgccgatga tgacgttgtt gaggttgttg ccaaagccga agaacgcggc
     1801 gccgagcagc gtcaggttct cgacgtgcgg cgtcgcagtg agattgaagc tgatcgagct
     1861 ctcgatgcgg tcgatgccgc cgctcggcgc ctccacgacc acgtcgccgg cgttgacgcg
     1921 atacacgtca ttgccgagcc cgccgatcat cctgtcgttg ccggcgccgc cgtcgaggcg
     1981 atcgtgaccg gcccttccca acaaggtgtc gttgccggcg aggccgctca ggatattgtt
     2041 ggcgttgttg ccggttatga cattgctgag gccattgccg gtgcccgcga ttgccgccac
     2101 gcccgtcagg gtgaggttct cgacattggg cctcagcgcg tagctcaccg agctcagcac
     2161 ccggtcgatg ccgccgcccg cgtcctcgac cacgacatcg gacctcgtgt cgacgatgta
     2221 ggtatcgttg ccgaggccgc cgagcatcgt gtcgatgccg gtgccgccgt cgagaaggtc
     2281 ggggccgccg agcccgcgca gcgtgtcatt gccgcccaag cccttcagca cgtcgcgccc
     2341 gttcgtgccg gtcagaacgt tgacgctgtt gttgccgatg atggtcgcca tggaagcctc
     2401 gcagatccga cgtccggaca ggtgcgccga gccctggaat ggtgcctgga cggccggagc
     2461 ggggcccctg ccgtcgattc cgatccatcc cggtttggag ggcgccgttt cggcgcgtgt
     2521 cgcacagtgg agatccgcag gaggggcggc ttgccttgcg agaggggccg acttgtcggg
     2581 ccagactacg tcttatgcgt cccggattca atcggcgtca cgtcgagaac ccgcgtggcg
     2641 ccgcggcatt gcggcgacga atacacggta ttgtcagcca gggtacgcgc caacgggcgg
     2701 caccgcagcg atcgctcccg gtggggaggg ttactccaca aaggtcacct tcgtgccttt
     2761 ctgcaccatt gctgcgagtt ccttcgcgtc ccagttggtg aggcgcacgc agccgtgtga
     2821 aaaggacttg cctacctttt ccggctcggg cgtgccgtgg atgccgtagg tctcgagcga
     2881 caggtcgatc cacaccgcgc cgacaggatt gttcggccca ggcttgatgg tcagcttctc
     2941 cttcgccttg acgcctttga acccgaattt cggatcgtaa gtgtaggtcg ggttctcggc
     3001 cacggcgcgc accgtgaagt cgccgctcgg cgctggcttg tcggtgctgc cgatcgaggc
     3061 tgggtagaag gcgaggagct tgccgccctt gtccaggacc ttaagggcgc gggcgccctt
     3121 ctcgacctcg atcctggcga cgttgccctt gtcgctcttg tcgctcttct cgccctgact
     3181 ggcgagcacg ttgggcacga cgatgcgcgt gcccgcctca tcaaagcgct tgccgggatt
     3241 gagcgcggtc agaagatccg cgctcgcgtg gaatttctcg gcgagcaatt cctgcgcgct
     3301 cgtgtagccc agccgatcga gcttggccat gtcttccatg cgcgccggga ttttctcggc
     3361 gaatggacct ttcacgtcgg cgtcgctgat cgtgtattcg atcaccgcag gctcgccgga
     3421 gctttccgtg agcttcgtcc agacgtcctg attcagctcg ccggccgcct tgaccccgtg
     3481 ctcctgcgcg aatgcggcca gcgccttgcg caggttatct cccgtgcggc catcgatcat
     3541 gcccggtgaa aagcggctgc ggtcgagcaa aacctgcgct ttgacgagag ccggcgacgg
     3601 ccccttgccg actttcgcgc cggtcttggc attgcgggcg tccgcagaga atgtcgcgtt
     3661 gttgaccgcg tccgccgtga ggccctgcgc cgcagcacag gcgatacccg cgcacaagct
     3721 gaccacggcc agcatcgcaa ctcttccatt ccggttcagc atctcggcaa ctccaccaca
     3781 ccagcacctg attgcgtaaa gagcgaccgg ggcgcgtggt tccgcgccgt cattggcaga
     3841 ttcggtgatt gcctttgcgg ccgcgcagat cgaggtgcag atgcgtggcg tgggcggcgt
     3901 cggagccagg gccgaggacg gtggtgaaat aggcgcaggc ctgcgagcgg atggcggcct
     3961 ggaacagcgc cggcgccgtt tcggccggat ggtcgccgat ctgtacgttc ttgcggccga
     4021 agtcgaagcc gctgatgtcg atcgcattgg cgaaag
//
LOCUS       DATAIQ010000526         2114 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_442576, whole genome shotgun sequence.
ACCESSION   DATAIQ010000526 DATAIQ010000000
VERSION     DATAIQ010000526.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2114)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2114)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2114
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_442576"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..228)
                     /locus_tag="VHN20_08730"
     CDS             complement(<1..228)
                     /locus_tag="VHN20_08730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012591988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="haloacid dehalogenase type II"
                     /protein_id="HEX2725888.1"
                     /translation="MAQSIDQDIKALFFDVFGTLADWRSGIARESERILRPLGLGLDW
                     TAFADAWRGEYNPSMEEVRSGRLPFSRLDVLH"
     gene            482..>2114
                     /locus_tag="VHN20_08735"
     CDS             482..>2114
                     /locus_tag="VHN20_08735"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019904459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003984 - acetolactate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0009082 - branched-chain amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase 3 large subunit"
                     /protein_id="HEX2725889.1"
                     /translation="MMSETMTGAEMVIRALQDQGVEHVFGYPGGAVLPIYDALFHQDK
                     VRHILVRHEQGAVHAAEGYARSSGKVGVVLVTSGPGATNAVTGLTDAMMDSVPLVCLT
                     GQVPTHLIGSDAFQECDTVGITRHCTKHNYLVKSIEELPRVLHEAFYVAANGRPGPVV
                     VDLPKDIQFKTGPYERPRDNQHKTYRPQVKGDLRQIQAAVDLMAQARRPVFYTGGGVV
                     NSGPHAAALLREIVRLTGFPITSTLMGLGAYPASDRQFLGMLGMHGTYEANLAMHECD
                     VMVCVGARFDDRITGRLDAFSPHSRKIHIDIDPSSINKNVTTEVGILGDVGHVLEDML
                     RVWKQSAPQVDKAALKDWWKKIDQWRARNCLAYRNSNEIIKPQYAVQRLYELTKDRDV
                     YITTEVGQHQMWAAQFFKFEEPNRWMTSGGLGTMGYGLPAAIGVQLAHPKALVVDIAG
                     EASILMNMQEMSTAVQHRLPVKIFILNNEYMGMVRQWQELLHGGRYSESYSASLPDFV
                     KLAEAYGCVGLRAEHPADLDGAIEEMIRVRKPVIFD"
BASE COUNT          367 a          697 c          708 g          342 t
ORIGIN      
        1 gtgcaggacg tcgagcctcg agaacggcag gcgcccgctc ctgacctcct ccatggaagg
       61 gttgtattcg ccgcgccagg catccgcgaa ggcggtccag tcgaggccga ggcccagggg
      121 gcggaggatg cgctcgctct cgcgcgcgat gccgctgcgc cagtcggcga gcgtgccgaa
      181 cacgtcgaag aagagggctt tgatgtcctg gtcgatgctt tgggccatgc gcccagcctc
      241 ggccaatgtg ccccgccgcg caagccgtcg ggggccggga gcgccgtctt gaccggagcg
      301 gcgggcttcg gtaaggctcg cccgttattt tcgcagaggt aggcaccagc gcatgcgcgc
      361 agtccttatc gtaacgggag cgccatcgac ggagcgggtc tgaccccgca ggtccggttg
      421 gtggcgcatg cagggtccct cggggccctt ttttgttgcc tgacgtggtg aacggagcac
      481 gatgatgagc gagacgatga ccggcgccga aatggtgatc cgcgccctgc aggaccaggg
      541 agtcgagcat gtgttcggct acccgggcgg cgccgtgctg ccgatctacg acgcgctgtt
      601 ccaccaggac aaggtccggc acatcctcgt gcggcacgag cagggggccg tgcatgccgc
      661 cgagggctat gcgaggtcgt cgggcaaggt gggcgtcgtc ctcgtcacgt ccggccccgg
      721 ggcaaccaac gccgtgaccg gcctcacgga cgccatgatg gattccgtgc cgctcgtgtg
      781 cctgaccggt caggtgccga cgcacctgat cggctcggac gcgttccagg aatgcgacac
      841 cgtcggcatc acgcgccact gcaccaagca caactacctc gtcaaaagca tcgaggagct
      901 gccgcgcgtc ctgcacgaag ccttttacgt ggcggcgaac gggcggcccg gcccggtcgt
      961 cgtcgacctg ccgaaggaca tccagttcaa gaccggccct tacgagcgcc cgcgcgacaa
     1021 ccagcacaag acctaccggc cgcaggtcaa gggcgacctc cgccagatcc aggcggcggt
     1081 cgacctcatg gcgcaggcca ggcgcccggt cttctacacc ggcggcggcg tcgtcaattc
     1141 cggcccgcac gcggccgccc tgctgcgcga gatcgtgcgc ctcaccggat ttccgatcac
     1201 ctcgacgctg atgggcctcg gcgcctatcc ggcctccgac aggcagttcc tcggcatgct
     1261 cggcatgcac ggcacctacg aggccaacct cgcgatgcac gaatgcgacg tgatggtctg
     1321 cgtcggcgcg cgtttcgacg accgcatcac cggccgcctc gatgcgttct cgccgcactc
     1381 gcgcaagatc cacatcgaca tcgatccgtc gtcgatcaac aagaacgtca ccaccgaggt
     1441 cggcattctc ggcgacgtcg gccatgtgct cgaggacatg ctgcgcgtgt ggaaacagag
     1501 cgcgccgcag gtcgacaagg cggcgctcaa ggactggtgg aagaagatcg accagtggcg
     1561 cgcgcgcaac tgcctcgcct accggaactc gaacgagatc atcaagccgc aatacgcggt
     1621 gcagcgcctc tacgagctga ccaaggaccg tgacgtctac atcacgacag aggtcggcca
     1681 acatcagatg tgggcggcgc agttcttcaa gttcgaggag ccgaaccgct ggatgacgtc
     1741 gggcggcctc ggcaccatgg gctacggcct gccggcggcg atcggcgtgc agctcgccca
     1801 cccgaaggcg ctcgtcgtcg acatcgccgg cgaggcctcg atcctgatga acatgcagga
     1861 gatgtcgacg gccgtgcagc accgcctgcc ggtcaagatc ttcatcctca acaacgagta
     1921 tatgggcatg gtgcgccagt ggcaggagct tctgcatggc gggcgctatt cggagagcta
     1981 ctcggcttcg ctgcccgatt tcgtcaagct ggccgaggcc tatggttgcg tcggcttgcg
     2041 cgccgagcat ccggccgatc tggacggggc gatcgaggag atgattcggg tgaggaagcc
     2101 ggtgatcttt gatt
//
LOCUS       DATAIQ010000527         2137 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_396694, whole genome shotgun sequence.
ACCESSION   DATAIQ010000527 DATAIQ010000000
VERSION     DATAIQ010000527.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2137)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2137)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2137
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_396694"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..556)
                     /locus_tag="VHN20_08740"
     CDS             complement(<1..556)
                     /locus_tag="VHN20_08740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725890.1"
                     /translation="MRIDTLPGRPHLGYCTNIHAGETWGEISASLDAHVPAIKAAVSP
                     GADLGLGLRLSSIAAADLMRPQTLERFRDQLRRLGAYVFTINAFPYGPFHGTRVKEQV
                     YEPDWRTAERVTFTMNAARTLAALLPEAGYGSVSTVPGAFKPRARETGAVDAIVERLL
                     ATTAQLVALRRETGRHVALALEPEP"
     gene            complement(560..1753)
                     /locus_tag="VHN20_08745"
     CDS             complement(560..1753)
                     /locus_tag="VHN20_08745"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HEX2725891.1"
                     /translation="MLDQCPTETWGTTRIQRFAVAYEYPVVFTRDVFDPANPVLAEIL
                     RSREPAKRHRVAVFVDDGVSAVMPRLARSVERYAAAHAASMAIAGDIVPVPGGERIKN
                     DPDATAALIDVLRARAIDRHSYVLAIGGGAVLDAVGYAAAIFHRGVRHVRLPTTVLAQ
                     ADSGVGVKNAVNAYGTKNLVGTFAPPFAVINDGVFIDRLPARDKRGGMAEAVKVALIR
                     DGDFFQWLERHVKALGAFDPNGLDILIQRTAALHMRQIAQGGDPFETGSARPLDYGHW
                     SAHKLETLTQYGLTHGEAVAIGVALDARYSTLAGLLPAGDDVRVCRLLRGLGFALWHE
                     ALQARDGDGRLAILNGLRDFQEHLGGELTITLLAGIGRGVEVHEIDHALVEQAVAWLG
                     REWRS"
     gene            1931..>2137
                     /locus_tag="VHN20_08750"
     CDS             1931..>2137
                     /locus_tag="VHN20_08750"
                     /inference="COORDINATES: protein motif:HMM:NF013799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HEX2725892.1"
                     /translation="MRPTLVLLIVGLTPRHLGRHTPNLERLARAGAMRPLTPILPAVT
                     CSVQATFMTGLLPRDHGVVANGWLF"
BASE COUNT          314 a          731 c          767 g          325 t
ORIGIN      
        1 acggctcggg ctcgagcgcc agcgccacat ggcggccggt ctcgcggcgc aaggcgacga
       61 gctgcgcggt ggtcgcgagc aggcgctcca cgatcgcgtc gaccgcgccc gtttccctcg
      121 cgcgcggctt gaacgcgcct ggaacggtgg agacgctgcc gtagccggcc tcgggcagca
      181 gcgccgcgag cgtgcgtgcc gcgttcatcg tgaacgtgac gcgctctgcg gtccgccagt
      241 ccggctcgta gacctgttcc ttgacgcgcg tgccgtggaa gggaccgtac gggaaggcgt
      301 tgatcgtgaa cacgtaggcg ccgagccgac gcaactggtc gcgaaaccgc tcgagggtct
      361 gggggcgcat caggtcggcg gcggcgatgc tcgagaggcg caggccgagg ccgagatccg
      421 cgccgggcga aacggcagcc ttgatggccg gcacatgcgc gtcgaggctt gcgctgatct
      481 caccccacgt ctcgccggcg tggatgttgg tgcagtagcc gagatgcggg cggccgggca
      541 gggtgtcgat gcgcaagcgt cacgacctcc actcgcgccc gagccaggcg accgcctgct
      601 cgaccagcgc gtgatcgatc tcgtgcacct cgacgccgcg cccgatcccg gcgagcaggg
      661 tgatggtgag ctcgccgccg agatgttcct ggaagtcgcg caagccgttg aggatggcga
      721 gccgcccgtc gccgtccctg gcctgcaacg cctcgtgcca gagcgcaaag ccgagcccgc
      781 gcaacaggcg gcagacgcgc acgtcgtctc cggccggcag caggccggcg agggtggaat
      841 agcgcgcatc gagcgcgacg ccgatcgcga ccgcctcgcc gtgcgtcaag ccgtattgcg
      901 tgagcgtctc gagcttgtgc gccgaccagt ggccgtaatc gagcgggcgc gccgatccgg
      961 tctcgaacgg atcgccgcct tgcgcgatct ggcgcatgtg cagcgccgcc gtgcgctgga
     1021 tcaggatgtc gagcccgttc gggtcgaagg cgccgagcgc cttcacgtgg cgctcgagcc
     1081 attggaagaa gtcgccgtcg cggatcagcg ccaccttgac cgcctcggcc atgccgccgc
     1141 gcttgtcgcg cgccggcaga cgatcgatga agacgccgtc gttgatcacc gcgaaaggcg
     1201 gggcgaaggt gccgacgagg ttcttggtgc cgtacgcatt gacggcgttc ttgacgccga
     1261 cgccgctgtc ggcctgcgcc agcaccgtcg tcggcaggcg cacgtggcgc acgccgcgat
     1321 gaaagatggc ggccgcgtag ccgaccgcgt cgagcaccgc gcccccgccg atcgcgagga
     1381 cgtaggagtg gcggtcgata gcccgcgcgc gcagcacgtc gatcagggcg gccgtggcgt
     1441 cgggatcgtt cttgatgcgc tcgccgccgg gcacggggac gatgtccccc gcgatcgcca
     1501 tcgacgcggc atgggcggcg gcgtagcgct cgacgctcct tgccaggcgg ggcatgacgg
     1561 cgctgacgcc gtcatcgacg aagacggcga cgcgatgccg cttggccggc tcgcggctgc
     1621 gcaggatttc ggcaaggacg gggttcgccg ggtcgaacac gtcgcgcgtg aacacgacgg
     1681 ggtattcgta cgccaccgcg aagcgctgga tacgcgtggt gccccaggtt tcggtcggac
     1741 attggtcaag cacggcggcg tccctcgtgc gggccggtca gctcaattat ttctacagcg
     1801 cgtcgcggcg cggcgaaacc gtcgcatccg gccgctgtcc cgtgccggac ccgcaaaaca
     1861 gatcgtcgtc gtttgaccac cgtcatccga ctccggagaa tggacgcggt ttcgcaactg
     1921 ttcaaccgcc atgcgtccta cgctcgtcct tttgatcgtc ggcctgacgc cccgtcatct
     1981 cgggcgtcac accccaaatc tggagcgcct cgccagggcg ggggccatgc ggccgctcac
     2041 gccgatcctg ccggccgtga cgtgcagcgt gcaggcgacc ttcatgaccg gccttctgcc
     2101 gcgcgatcac ggggtcgtgg ccaacggctg gctgttc
//
LOCUS       DATAIQ010000528         1723 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_442646, whole genome shotgun sequence.
ACCESSION   DATAIQ010000528 DATAIQ010000000
VERSION     DATAIQ010000528.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1723)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1723)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1723
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_442646"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            188..1459
                     /gene="ispG"
                     /locus_tag="VHN20_08755"
                     /gene_synonym="gcpE"
     CDS             188..1459
                     /gene="ispG"
                     /locus_tag="VHN20_08755"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018260999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl
                     diphosphate synthase activity [Evidence IEA];
                     GO_process: GO:0044237 - cellular metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HEX2725893.1"
                     /translation="MNVIPRFEDNAAAPAPRHRTVAVTIGSVVMGGGAPVVVQSMTNT
                     DTADVAATAAQVAALARAGSEIVRITVDRAEAAAAVPHIRDRLGRMGVAVPLVGDFHY
                     IGHKLLAEHPACAEALDKYRINPGNVGFKEKKDRQFGAIVEMAIRHGKAVRIGANWGS
                     LDQELLTQLMDANARAERPHDARAVTREAMVQSALLSAARAEEIGLPRNRIVLSAKVS
                     AVQDLIAVYRELAARSDYALHLGLTEAGMGSKGIVASSAAIGILLQDGIGDTIRFSLT
                     PEPGGDRTLEVKTAQELLQTMGFRTFVPLVAACPGCGRTTSTVFQQLARDIQDWIASS
                     MPDWRRQYPGVENLNVAVMGCIVNGPGESKHADIGISLPGTGEAPAAPVFIDGRKAMT
                     LRGPTIAAEFKQILSDYIAARYGTDGRTAAQ"
BASE COUNT          277 a          606 c          570 g          270 t
ORIGIN      
        1 acgagatgtc ctccgcccgg ctcgccggcg cgatctcgga tctgctcggc cggcaaggtt
       61 tcgcgccgca gatgcaggtg ctcgagattt ccgggcgctg cgcccattgc ggcggcgaag
      121 ccgatgccgc ttgaaccggg cgcctgccga tgccagtacc tgccatgatc agcgtccgac
      181 ccggcccatg aacgtcatcc cgcgattcga ggacaatgcc gccgcgcccg cgccgcgtca
      241 ccgcaccgtt gccgtgacga tcggttcggt cgtgatggga ggcggagccc ccgtcgtcgt
      301 gcagtcgatg accaacacgg acacggccga cgtcgcggcg accgccgcgc aggtggcggc
      361 ccttgcgcgg gcgggatcgg agatcgtgcg catcaccgtg gatcgcgccg aggccgccgc
      421 cgccgtgccg catatccgcg accgtctcgg ccgcatgggc gtcgcggtgc ccctcgtcgg
      481 cgattttcat tatatcgggc acaagcttct cgccgagcac ccggcctgcg cggaggcgct
      541 cgacaagtat cgcatcaacc cgggcaatgt cggcttcaag gagaagaagg accggcagtt
      601 cggcgccatc gtcgagatgg ccatccggca cggcaaggcg gtgcgcattg gcgccaactg
      661 gggctccctc gatcaggagc tcctgaccca gctgatggac gcgaacgcca gggccgagcg
      721 gccgcacgat gcccgcgccg tgacccgcga agcgatggtg cagtcggcgc tgctctcggc
      781 cgcgcgcgcc gaggagatcg gcctgccccg caaccgcatc gtgctctccg ccaaggtctc
      841 ggccgtgcag gacctgatcg ccgtctatcg cgagctggcg gcccgttccg actatgccct
      901 gcatctcggc ctgaccgagg ccggaatggg ctcgaaaggc atcgtcgcgt cgtcggccgc
      961 catcggcatc ctgttgcagg acggcatcgg cgacaccatc cgcttctcgc tgaccccgga
     1021 accgggcggc gaccgaacgc tcgaggtcaa gacggcgcag gagctgctgc agacgatggg
     1081 gttccgcacc ttcgtgccgc tggtggcggc ctgtccgggc tgcgggcgca cgacctccac
     1141 cgtgttccag cagctggccc gggacatcca ggactggatc gccagctcga tgccggactg
     1201 gcgccggcaa tatcccggcg tcgagaacct caacgtcgcg gtgatgggtt gcatcgtcaa
     1261 cggccccggc gagtcgaagc acgccgatat cggcatctcg ctgccgggca ccggcgaggc
     1321 cccggccgcg ccggtcttca tcgacggccg caaggccatg accttgcgcg gcccgaccat
     1381 cgcggcggag ttcaagcaga ttctgagcga ctacattgcc gcccgctatg ggaccgacgg
     1441 ccggaccgct gcacaataat tgctcagtgt agccggtttg cacgggctcg ccgcgttgtg
     1501 gaaccgaagc tcagattccg ttttaagcct caatatggtg tgctaagagc ccgccgcgcc
     1561 ggcgcgacgg cccaccaggc aaattcctgg tgaggccgtc tacagccgtg agacgaacgg
     1621 tgtttatgtg aatccggccg tacccctgaa gcaagcgaca atcacgccgg agcaaggccc
     1681 cggccacacg gattccgccg ctccgatcgt ctcggcctat ccg
//
LOCUS       DATAIQ010000529         5306 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_151338, whole genome shotgun sequence.
ACCESSION   DATAIQ010000529 DATAIQ010000000
VERSION     DATAIQ010000529.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 5306)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5306)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5306
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_151338"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2147)
                     /locus_tag="VHN20_08760"
     CDS             complement(<1..2147)
                     /locus_tag="VHN20_08760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725894.1"
                     /translation="MRISRRRFWGVQSGRHGRFGLFVGVTVLVTLVAMLGAQAREATV
                     RGAEMNRFGRMVFEFDQATKLTARVSNNVLIISFQQPVLLRGERLAAELPSYVSMLRR
                     DPDGTGLRIALTNTFQPSVLEAGEQVFIDLLPKDWTGLPPGLPQEVVSELARRAREAE
                     SKVRDDRSRQQAENPKPIIVRVAHLPTLTRAVFAPPTVVPVSFKAAGSDVELQFEGAL
                     TLETAQLRAKLGPAVRAISARPGDGVLQVTLSLEPGYEARGFREDETFVVDVAKPNSV
                     KTPKPAATDQSAKDASGAKDASSPRSDGADASLLMPELPVPGLASQPRPQPAKPADRI
                     APAQPAKPAEPLNPGQAVGPAAAIRPSATVAGDGLKIAFPFAARTAAAAFERDGLVTA
                     VFHGPATIDLSALPDPALKFVRRAEVRREGAVAIVQFALVLPNLVRLSPQDNSWVLSI
                     GDTGFGSSQPVNVARMIDGDGQRIVKVPLPEASGVHWFDDRDSGERLAVVTAFGPSRG
                     VPKPQRFSEFRLLQSAHGLAIAADADDVYVRFDPDEVTIARPLGLAVSLPKLSPETGL
                     GHGQPSHPVIVREEWLAQRSGDMSERQRELSRKVVEAQAADVSRARIELARFLVAAGL
                     NAEAGGLLSFAVEQDPTLLRQNHVLLLRAIAAAQMHRTAEARKSLSADILAEDPEGIL
                     WRAVVDAQDKRWQQALAGFRRSNLVLDLYPDDL"
     gene            complement(2255..3064)
                     /locus_tag="VHN20_08765"
     CDS             complement(2255..3064)
                     /locus_tag="VHN20_08765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010687240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725895.1"
                     /translation="MMRGLRLIDAVVIAAVAMLGLKALGLLSGSRSSAPSQVVAAPSQ
                     TPPGEPLPKFARVLAHARSNYVPPDVGMTGAVAEDKKNEAAPGAADKPATSPVAASEP
                     APAGSPSERALLERLGERRDELQQRSREMDMRERLLENAERKLEGRINELKGLEEKAE
                     VAATKRGETEAGAIRNLVTMYETMKPKDAARVFDRLSHDVLVPVVLQMKPAKMAEVLA
                     LMSPDAAEKLTVALAKRAKGLSGESRAAATPAGLADTELPAIDAPAPSSKR"
     gene            complement(3061..3534)
                     /locus_tag="VHN20_08770"
     CDS             complement(3061..3534)
                     /locus_tag="VHN20_08770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018042600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6468 domain-containing protein"
                     /protein_id="HEX2725896.1"
                     /translation="MSTVITLLADLLVAVLLIATITSSVRLSSRITRLKADEEAMRKT
                     IAELMLATETAERAIAGLRTTLSDCDRTLADRLRTAERYAADLASQVEAGETVVNRIS
                     QIVDASRQMAVFERKALPEPAAEKVNPQGDRLRAAVATAEALAERTAKRFKGHVR"
     gene            complement(3541..4860)
                     /gene="fliM"
                     /locus_tag="VHN20_08775"
     CDS             complement(3541..4860)
                     /gene="fliM"
                     /locus_tag="VHN20_08775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008196786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009288 - bacterial-type flagellum
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliM"
                     /protein_id="HEX2725897.1"
                     /translation="MVAENDQGLDEEGVATLAEPGEGGDAPAVEDDWAAALAEQGVGK
                     PAKAAVEGAAEAGGGEGDLSDEWGAALAEQNAPINANDIAADWATMIDEGVNDDSPER
                     AGADRILTQEEIDQLSGFSLHELSATGTGGIRAIVDSGVVSYERLPMLEIIFDRMIRL
                     LSTSLRNFFQDNVEVTLDNITSVRFGDYLNSIPLPVQLAVFRAEGWDNSGLVTVESNL
                     AYSTLDLLLGGKRGGQATRLDGRPFTTIEMQLIKRMVEIVLADAELSFQPLSPVRFLV
                     DRIERNPRFATITRPANAAILIDLKLDMEGRGGLLQILLPYATIEPIRDLLLQSFMGE
                     KLGRDAIWEGHLATEIWQADVTVEAVLHEVRLPLKQVMRLKVGDTLMFDARPNELVTL
                     RCGEWTLTQGRAGRVDDRIAVQVARPLRQSRTTFAAFEASVKNQKTA"
     gene            complement(4868..>5306)
                     /locus_tag="VHN20_08780"
     CDS             complement(4868..>5306)
                     /locus_tag="VHN20_08780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006932674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009425 - bacterial-type flagellum basal
                     body [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="flagellar basal body-associated FliL family
                     protein"
                     /protein_id="HEX2725898.1"
                     /translation="GGSGGKKKLIMFGAIGAVVLGLLGGGYFFFFRSAPPQETVKKPV
                     SFLEMREMTVNLAPDNANDRTRLLKFKVSLEVNDPKLVPQVQALMPRVEDSFQTFLRE
                     LRASDLEGSGGLYRLREELLRRVNIAVYPTRVDAVLLKEMIVQ"
BASE COUNT          852 a         1806 c         1781 g          867 t
ORIGIN      
        1 tgcagatcgt cgggatagag atccagcacg agattcgagc ggcggaatcc cgccagcgcc
       61 tgctgccagc gcttgtcctg cgcatcgacc accgcgcgcc acaggatgcc ctcgggatcc
      121 tcggccagga tgtcggcgga caggctcttg cgcgcctcgg ccgtgcggtg catctgcgcc
      181 gccgcgatcg ccctgagcag caggacatgg ttctggcgca acagcgtcgg atcctgctcg
      241 accgcgaaac tgagcagccc accggcctcg gcattcagtc cggcggcaac aagaaagcgc
      301 gccagctcga tccgcgcgcg gctgacgtcg gcggcctgcg cctcgacgac cttgcggctg
      361 agctcgcgct ggcgctcgct catgtcgccg ctccgctgcg cgagccattc ctcgcgaacg
      421 atcacgggat gcgacggctg cccgtggccg aggccggttt ccggcgacag tttcggcaag
      481 gacacagcga ggccgagcgg gcgcgcgatc gtgacctcgt ccggatcgaa acggacatag
      541 acgtcatcgg cgtccgcagc gatggccagg ccgtgcgcgc tttgcaggag gcggaactcg
      601 gagaagcgct gcggcttcgg cactccccgc gagggcccga atgcggtgac gacggcgagg
      661 cgttcgccgc tgtcccgatc gtcgaaccaa tgcacgccgg aagcttcggg cagaggcacc
      721 ttgacgatcc tctggccgtc gccgtcgatc atgcgcgcga cgttgacagg ctggctcgag
      781 ccgaagccgg tgtctccgat gctcagcacc cagctgttat cctgcggcga caggcgcacc
      841 aggttcggca gcacgagcgc gaattgcacg atcgcgacgg cgccttcccg gcggacctcg
      901 gcacgacgca cgaatttcag cgcggggtcc ggcagcgcgg acagatcgat ggtcgccggg
      961 ccgtgaaaca cggcggtgac gagcccgtcg cgctcgaacg cggcggcagc cgtgcgcgca
     1021 gcgaacggaa aggcgatctt gagaccgtcg cccgcgaccg tcgcgctcgg ccggatcgcc
     1081 gcagccgggc cgacggcttg cccaggattg agcggttcgg ccggcttcgc cggttgcgca
     1141 ggagcgatgc gatccgcggg cttcgccggc tgcggccgcg gttgcgaggc cagaccggga
     1201 accggcagct ccggcataag cagcgatgca tcggcgccgt ccgaacgtgg actcgacgcg
     1261 tcctttgcgc ccgacgcgtc cttcgcgctc tggtccgtag cagctggctt cggtgtcttg
     1321 acggagttgg gcttggcgac atcgacgacg aatgtctcgt cctcgcggaa gccgcgtgcc
     1381 tcgtagcctg gctcgagcga cagcgtgacc tgcaggaccc cgtcgcccgg ccgcgccgag
     1441 atggcgcgca ccgcgggccc gagcttggcg cgcagctgcg ccgtctccag cgtgagcgct
     1501 ccctcgaact ggagctccac gtcgctgccc gctgccttga aggaaaccgg cacgaccgtc
     1561 ggcggcgcga acacggcgcg ggtcagcgtc ggcaaatgcg cgacgcgcac gatgatcggt
     1621 ttcgggttct cggcctgctg acggctgcga tcgtcgcgaa ccttgctttc ggcctctcgc
     1681 gcgcgccgcg ccagctcgct gaccacctcc tgcggcagcc cgggcggcag gcccgtccag
     1741 tcctttggca agaggtcgat gaagacctgc tcgccggctt cgagcacgct cggctgaaac
     1801 gtattggtca gcgcgatacg caggcccgtg ccatccggat cacgccgcag catcgaaaca
     1861 taggacggca attcggccgc gaggcgctcg ccgcggagca gcacgggctg ctggaaggag
     1921 atgatcagga cgttgttgct gacccgggcc gtgagcttcg tcgcctggtc gaactcgaag
     1981 accatgcggc cgaagcgatt catctcggcc ccgcgcacgg tcgcttcgcg cgcctgtgcg
     2041 ccaagcatgg ccaccagcgt gacaagcacg gtgacgccaa cgaacaagcc gaagcgccca
     2101 tgacgcccgg actgcacgcc ccaaaaccgc cggcgagaga tacgcatcga cgacgaaccc
     2161 acaacgctga actcgaacac cgcccggccg acagccgggc gaactcaacg ccgggattct
     2221 agacaggcgc ggctaacgcg cgcttaacga tatctcatcg ttttgacgaa ggcgccggcg
     2281 catcgatggc cggcagctcg gtgtcggcaa ggcccgccgg ggttgccgcg gcccggctct
     2341 cgcccgacaa gcccttggcg cgcttggcga gcgcgacggt cagcttctcg gcagcatcgg
     2401 gcgacatcag ggccaggacc tccgccatct tggccggctt catctgcagc accacgggca
     2461 ccagcacatc gtgcgagagg cggtcgaaca cacgggccgc gtccttgggc ttcatcgtct
     2521 cgtacatggt gacgagattg cggatcgcgc ccgcctcggt ttcgccgcgc ttggtcgccg
     2581 ccacctcggc cttttcctcc aggcccttga gctcgttgat gcgaccttcc agcttgcgct
     2641 cggcattctc gagaaggcgc tcgcgcatat ccatctcgcg ggagcgctgc tgcaattcat
     2701 cgcggcgctc gccaagccgc tcgagaaggg cgcgctcgga gggcgatccg gccggtgccg
     2761 gctcgctcgc ggcgacgggg ctcgtggccg gcttgtcggc cgctccgggc gctgcctcgt
     2821 tcttcttgtc ctcggcgacg gcgcccgtca tgccgacgtc gggcggcacg taattgctgc
     2881 gcgcgtgggc caggacccgc gcgaatttgg gaagcggctc accgggcggc gtctggctag
     2941 gcgcagcgac gacctggctc ggagcggacg agcgcgagcc cgacagcagg cccagcgcct
     3001 tgagaccgag catggccacg gcggcgatca cgactgcatc gatcagacgc agtccacgca
     3061 tcatcggacg tggcctttga agcgcttggc cgtgcgttcg gccagggcct cggcggtggc
     3121 gactgcggcg cgcaagcgat cgccctgcgg attgaccttc tcggcggcgg gttcaggcag
     3181 cgccttgcgc tcgaacacgg ccatctggcg cgacgcatcg acgatctgcg aaatccggtt
     3241 gacgacggtc tcgcccgcct ccacctggct ggcgagatcg gcggcgtagc gctcggcggt
     3301 gcgcaggcgg tcggccagcg tgcggtcgca atcgctgagc gtggtgcgca agccggcaat
     3361 cgcccgttcg gccgtctcgg tggcgagcat cagctcggcg atggtcttgc gcatcgcctc
     3421 ctcgtccgcc ttgaggcgcg tgatcctgct gctgaggcgc acggacgacg tgatggtggc
     3481 gatcagcagc accgcgacaa ggagatccgc caggagcgta atgaccgtgc tcatggtcgc
     3541 ctatgcggtc ttctggtttt tgacgctcgc ctcgaaggcc gcgaacgtcg tgcgcgactg
     3601 gcgcagcggg cgggcgacct gaacggcgat ccggtcatcg acccggccgg cgcgaccttg
     3661 cgtcagggtc cactctccac agcgcagcgt cacgagttcg ttcggccggg cgtcgaacat
     3721 caaggtgtcg ccgaccttca ggcgcattac ctgcttcagg ggcaggcgga cctcgtggag
     3781 gaccgcttcg acggtcacgt cggcctgcca gatctccgtg gccagatgtc cttcccagat
     3841 cgcatcacgg ccgagctttt cgcccatgaa gctctgcagc aggagatcgc ggatcggctc
     3901 gatcgtcgca tagggcagca ggatctgaag gaggccgccc cggccttcca tgtcgagctt
     3961 gagatctatc aggatggcgg cgttggcggg acgggtgatg gtcgcgaagc gcgggttgcg
     4021 ctcgatgcgg tcgacgagaa agcgcaccgg cgacagcggc tggaacgaca gttccgcgtc
     4081 cgccagcacg atctcgacca tgcgcttgat cagctgcatc tcgatggtcg tgaaggggcg
     4141 cccgtcgagg cgcgtcgcct gcccgccgcg ctttccgccg agaagaagat ccagcgtcga
     4201 ataggcaagg ttcgattcga ccgtgactag gccggaattg tcccaccctt cggcgcggaa
     4261 caccgcgagt tgcaccggca gcgggatcga gttcaggtaa tcgccgaagc gcacggaggt
     4321 gatgttgtcg agggtgacct cgacgttgtc ctggaagaag ttgcgcaggc tcgtcgacag
     4381 gagccggatc atcctatcga agatgatctc cagcataggc aagcgttcgt agctgacgac
     4441 gcccgaatcg acgatggccc ggatgccgcc agtaccggtc gccgacagct catgcaggga
     4501 aaacccggag agctgatcga tttcctcctg ggtgaggatg cgatcggcgc cggcgcgttc
     4561 gggcgaatcg tcgttcaccc cctcgtcgat catcgtcgcc cagtcggcgg cgatgtcgtt
     4621 cgcgttgatg ggagcgttct gttcggcgag ggcagcgccc cactcgtcgc tgagatcgcc
     4681 ttccccgccg cccgcctccg cagcgccctc taccgcggcc ttggcgggct tgcctacgcc
     4741 ctgctccgca agcgcggccg cccagtcgtc ctcgaccgcg ggcgcgtcgc cgccctcgcc
     4801 cggctccgca agcgtggcca ccccttcctc gtccaggccc tgatcgttct cggccaccat
     4861 tcacccctta ttggacgatc atttccttga gcagcacggc gtcgaccctg gtcgggtaaa
     4921 cggcgatatt gacacgcctc agcagctctt cccgcaggcg ataaagcccg cccgagccct
     4981 cgagatcgct cgcccgcaac tcgcgcagga aggtctggaa gctgtcctcg acgcgcggca
     5041 tgagcgcctg gacctgaggc acgagtttcg gatcattcac ctcaagggaa accttgaatt
     5101 tcaagagcct tgtccgatca ttggcgttgt cgggcgcgag gttgacggtc atctcgcgca
     5161 tttccaggaa gctgaccggc ttcttgacgg tctcctgggg aggagcacta cggaaaaaga
     5221 agaagtagcc accgccgaga agaccgagca cgacggcgcc gatcgcgccg aacatgatga
     5281 gcttcttctt gccgcccgag ccgccg
//
LOCUS       DATAIQ010000530         3024 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_120436, whole genome shotgun sequence.
ACCESSION   DATAIQ010000530 DATAIQ010000000
VERSION     DATAIQ010000530.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3024)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3024)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3024
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_120436"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            149..2590
                     /locus_tag="VHN20_08785"
     CDS             149..2590
                     /locus_tag="VHN20_08785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020175515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 1A"
                     /protein_id="HEX2725899.1"
                     /translation="MRFVLRFFGFLFSVGAIVALVGGAVAAYFLWEYSKDLPDHAALA
                     NYEPPVMTRVHAADGSLLAEYAREKRLYIPIQAVPKQVVGAFLSAEDKNFYKHNGVDP
                     EGIVRAVITNAKTGKKQGASTITQQVAKNFFLSNEQTLDRKVREALTAFRIEATFSKD
                     RILELYLNQIFLGAPSPGLGAYGIAAAALQYFGKSVHELNIQEAAYMAALPKAPNNYH
                     PFRKAKEALERRNQIIDLMAENKYITRAEADEAKSQPLGVNPRVISPNTIASGFFAEE
                     VRREIAERYGEKKLYEGGLSVRTTLDPKLQAMARKALVDGLVRYDEARGWRGAQHKIE
                     LAGREWGLAIAEVPALGDVQPWRLAVVLEVAGGQARIGLQPKKEASGQVGRERELGAL
                     TADGVKWTRRNVQQVVAVGDLIYVEPLDAKAGQFRLRQVPEVSGAFVAMDPYTGRVHA
                     MVGGFSFDQSEFNRATQALRQPGSSFKPFVYAAALDNGYTPSSIIMDAPITIDPGGGQ
                     EPWSPSNYDGKPTGPRTLRYGIEQSKNLMTVRLAKDLGMPLVAEYSRRFGIYDDLLPV
                     LPMALGAGETTVMRMATAYAMLANGGKRIRPTVIDRIQDRTGQTIYRHDDRQCIGCNA
                     DKWSDQDEPKLVDRREQVLDPLTAYQVVSILEGAVQRGTGTALKAVGKPIAGKTGTTN
                     DAKDVWFMGFSPDLVAGVYLGYDKPQSLGDRATGGGYSAPIVRDFMMAALKDKPATPF
                     RVPPGIKLIRVSRGSGLRAGSGEGGGDTILEAFKPGTAPPDSYSIVGGYGEGGAIAVT
                     PEAQRSVGVGTGGLY"
     gene            2673..3024
                     /locus_tag="VHN20_08790"
                     /pseudo
     CDS             2673..3024
                     /locus_tag="VHN20_08790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015932468.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PCRF domain-containing protein"
BASE COUNT          549 a         1025 c          997 g          453 t
ORIGIN      
        1 cgcagtttca ccatagataa cgtgtcaatg cggtggcgtg gggagccgat tccgcctata
       61 cgtcaaggat agataagccg gggcgggccg ggatcgcgcc agcgggaaat cgccttgtcg
      121 cgcaaggcaa gataacggat cagcgcatat gcgtttcgtg cttcggttct ttggcttcct
      181 gttcagcgtg ggcgccatcg tcgcgttggt agggggcgcc gtggccgcgt attttctttg
      241 ggaatactcc aaggacttgc cggaccacgc ggcgctcgcc aattacgagc cgccggtgat
      301 gacgcgcgtg cacgccgccg acggcagcct gctcgccgaa tacgcgcgcg agaagcgcct
      361 ctacatcccg atccaggcgg tgccgaagca ggtggtcggc gccttcctgt cggcggagga
      421 caagaacttc tacaagcata acggcgtcga tccggaaggc atcgtccgcg ccgtgatcac
      481 gaatgccaag actggcaaga agcaaggcgc gtccaccatc acccagcagg tggcgaagaa
      541 cttcttcctg agcaacgagc agacgctcga ccgcaaggtc cgcgaggctc tgacggcctt
      601 ccgcatcgag gcgaccttct cgaaggaccg catcctcgag ctctacctca accagatctt
      661 cctcggcgcg ccgtcgccgg ggctgggcgc ctacggcatc gctgcggcgg cgctgcagta
      721 tttcggcaag tcggtgcacg agctcaacat ccaggaggcg gcctacatgg ccgccctccc
      781 aaaggcgccc aacaactatc atccgttccg caaggccaag gaggcgctcg agcggcgcaa
      841 ccagatcatc gatctgatgg ccgagaacaa atacatcacc cgcgccgagg ccgacgaggc
      901 caagagccag ccgctcggcg taaacccccg cgtcatctcc cccaacacga tcgcgtcggg
      961 cttcttcgcc gaggaagtgc ggcgcgagat cgccgagcgc tacggcgaga agaagctcta
     1021 tgaaggcggt ctctcggtcc gaacgacgct cgatccgaag ctgcaggcga tggcccgcaa
     1081 ggcgctggtc gacggcctcg tgcgctacga cgaggcgcgc ggctggcgcg gcgcgcagca
     1141 caagatcgag ctggcgggcc gggaatgggg cctcgccatc gccgaagtgc cggctctcgg
     1201 cgacgtgcag ccctggcgcc tcgcggtcgt tctcgaggtc gccggcgggc aggcgcgcat
     1261 tggcctgcag ccaaagaagg aagcctccgg ccaggtgggg cgcgagcgcg aactgggcgc
     1321 gctgacggcc gacggcgtga aatggacccg gcgcaacgtg cagcaggtcg tcgctgtcgg
     1381 cgacctgatc tatgtcgagc cgctcgacgc caaggccgga cagtttcgcc tgcgccaggt
     1441 tcccgaggtc tccggcgcct tcgtggcgat ggatccctat accggccgcg tccacgccat
     1501 ggtcggcggc ttctcgttcg accagagcga gttcaaccgc gccacccagg cgctgcggca
     1561 gcccggctcg tcgttcaagc ccttcgtcta cgccgcggcg ctcgacaacg gctacacgcc
     1621 gtcgtcgatc atcatggacg cgcccatcac catcgatccg ggcggtggcc aggagccgtg
     1681 gtcgccatcc aactatgacg gcaagccgac cgggccgcgc acgctgcgct acggtatcga
     1741 gcagtcgaag aacctgatga ccgtgcgcct cgccaaggat ctcggcatgc cgctggtcgc
     1801 cgaatactcc cggcgcttcg gcatctacga cgacctgctg cccgtgctgc cgatggccct
     1861 tggcgccggc gaaaccaccg tgatgcgcat ggccacggcc tacgccatgc tggccaacgg
     1921 cggcaagcgc atccgtccga cggtgatcga ccgcatccag gaccgcaccg ggcagacgat
     1981 ctaccgccat gacgaccggc aatgcatcgg ctgcaacgcc gacaagtggt cggatcagga
     2041 cgagccgaag ctggtcgacc ggcgcgagca ggtgctcgac ccgcttaccg cgtatcaggt
     2101 cgtctcgatt ctcgaaggcg ccgtccagcg tggcaccggc acggcgctga aggcggtcgg
     2161 caagccgatc gccggcaaga ccggcaccac caacgacgcc aaggacgtgt ggttcatggg
     2221 cttctcgccg gacctcgtcg ccggcgtcta tctcggctac gacaagccgc aatcgctcgg
     2281 cgaccgggcg accggcggcg gctattcggc gccgatcgtg cgcgatttca tgatggccgc
     2341 gctcaaggac aagccggcga cgccgttccg cgtcccgccc ggcatcaagc tgatccgcgt
     2401 gagccgcggc agcggcctgc gcgccgggtc cggcgaaggg ggcggcgaca ccatcctcga
     2461 ggcgttcaag ccgggaacgg cgccgcccga cagctactcg atcgtcggcg gctacggcga
     2521 gggcggtgca attgcggtca cgcccgaggc gcagcgatcc gtcggcgtcg gcacgggcgg
     2581 cctctactga ctctctagct gtttacacag ggcggggcgg ttgtttatga cgccgctccg
     2641 cctatctcat cacgaccatt ctcgtcacca tcatgcgcgc cgaaatcgaa tcgctcaccg
     2701 aagccgccaa gcagtccatc gggctgctga ggaggcatct ttgactggga tagcgcccag
     2761 acacggattg ccgagctgaa cgcccgggcc gaggacccga acctctggga cgatgccgac
     2821 gccgcgcaaa agatcatgcg cgagcggaac gagctggagg accagatctc cggcatcaag
     2881 cgcctcgagc aggagctcga cgacgccaag atgctgatcg agctcggcga cgccgagggc
     2941 gaccaagggg ccgtcgctga aggcgaagcc gcgatccggg ccgttcaggc ggaagcagcg
     3001 cgccgtcagg tcgagacgct cctg
//
LOCUS       DATAIQ010000531         1957 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_442854, whole genome shotgun sequence.
ACCESSION   DATAIQ010000531 DATAIQ010000000
VERSION     DATAIQ010000531.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1957)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1957)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1957
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_442854"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..652)
                     /locus_tag="VHN20_08795"
     CDS             complement(<1..652)
                     /locus_tag="VHN20_08795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725900.1"
                     /translation="MVLTLAWLAAAGAVLAIRRAEWWPLLKASDAPPEPISLAGIAAF
                     VAAVLVPVACLWLFVAAVLQRRELALQRKELAETRAVLAAQQAELAAHLQESARQTAI
                     MNEMLEATWSRALYEEFSLRLYYLAAYIERNGRHVTAPVQAEEGIRNVPLFDRPAGFV
                     LSEQQSSVDLLLGHFAEWLRRGVLGLGDVTLTPHTGYAGAKARYLAAIVHVQKSVAA"
     gene            complement(966..>1957)
                     /gene="tcuA"
                     /locus_tag="VHN20_08800"
     CDS             complement(966..>1957)
                     /gene="tcuA"
                     /locus_tag="VHN20_08800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-dependent tricarballylate dehydrogenase
                     TcuA"
                     /protein_id="HEX2725901.1"
                     /translation="ALSLLHDDDGVQGVRVKRQGRTQEVRAGAVVLAAGGFQANPEWR
                     TRYLGPGWDLAKVRGTRFNVGDGIRMALDIGASARGNWSGCHAVGWERNAPEFGDLAV
                     GDAFQKHSYPWGIMVNAHGKRFVDEGADFRNYTYAKYGRVILEQPGQFAWQVFDNKVL
                     HLLRDEYRIKQVTKVVANSLEELVQKLDDVNPEGALAEIKAYNAAVRKDIAFNPNVKD
                     GRRTEGLAVNKTNWANTIDEPPFHGYAVTCGVTFTFGGLRIDTDAHVMDVLGNAIPGL
                     YAAGELVGGIFYFNYPGGTGLTNGAVFGKIAGANAARYVKSQPQAQGARAQAR"
BASE COUNT          282 a          678 c          687 g          310 t
ORIGIN      
        1 gtgccgcgac gcttttctgg acgtggacga tcgccgctag atagcgcgcc ttggcgccgg
       61 cgtagccggt gtgcggcgtc agggtgacgt cgccgaggcc gaggacgccg cgccgcagcc
      121 actcggcgaa atggccgagc agaaggtcaa ccgaggattg ctgctcgctc aggacgaagc
      181 ccgcgggccg gtcgaacagc ggcacgttcc tgatgccctc ctccgcctgg accggcgccg
      241 tcacgtgcct gccgttccgc tcgatatagg ccgcaaggta ataaagccgc aggctgaatt
      301 cttcatacag cgcccgcgac cacgtcgcct cgagcatctc gttcatgatg gcggtctggc
      361 gtgcgctctc ctggagatgc gccgcgagct ccgcctgctg ggcggccagc accgcccggg
      421 tctcggcgag ctccttgcgc tgcagggcga gctcgcggcg ctgcagcacg gcggcgacga
      481 acagccagag gcacgcgacc gggacgagga cggcggcgac gaacgccgcg atcccggcca
      541 gcgagatcgg ctccggcggc gcatccgagg ctttgaggag cggccaccac tccgcgcggc
      601 ggatcgccag cacggcgccg gccgcggcca gccaggccag cgtcaacacc atcgccggcc
      661 agatccgacc ggggcgatcg ccgctgtccg gacttgagct catcgcccgc actctgccgc
      721 gggccctgcg ccgagtcacg ggggcgcccc caatccttcc cggcgacggg aaggtggcgc
      781 gcgtgcacag catcgcgccg gatggggcgg cagcgccgac ctgaattgac gttggcgctg
      841 ccgccacgcc cccgtcgctg cgcgactcgg ccctccccaa cgcaagtcgg gtgttcccga
      901 cttgcgcgct tgtggtggac gatctcggga acacccgaga tcggcgggag ggattggtgc
      961 ccgcctcagc gcgcctgtgc cctcgcccct tgcgcctgcg gctggctctt cacgtagcgc
     1021 gcggcgttgg cgcccgcgat cttgccgaac acggcgccgt tggtgaggcc ggtgccgccc
     1081 ggatagttga agtagaagat gccgccgacc agctcgccgg ccgcatagag acctgggatg
     1141 gcgttgccga gcacgtccat cacatgcgcg tcggtgtcga tgcgcagccc gccgaacgtg
     1201 aaggtcacgc cgcaggtgac cgcgtagccg tggaacggcg gctcgtcgat ggtgttggcc
     1261 cagttggtct tgttgacggc gaggccttcc gtccggcggc cgtccttgac gttggggttg
     1321 aaggcgatgt ccttgcggac cgcggcgttg taggccttga tctcggcgag cgcgccctcc
     1381 gggttcacgt cgtcgagctt ctgcacgagc tcctcgagcg agttggcgac gaccttggtg
     1441 acctgcttga tgcgatattc gtcgcgcagg aggtgcagga ccttgttgtc gaaaacctgc
     1501 caggcgaact ggccgggctg ttcgaggatc acgcgcccgt atttggcgta ggtgtagttg
     1561 cggaaatcgg caccctcgtc gacgaagcgc ttgccgtggg cattgaccat gatgccccac
     1621 ggatacgagt gcttctggaa cgcgtcgcca accgcgaggt cgccgaattc cggggcgttg
     1681 cgctcccagc cgaccgcgtg gcagccggac cagttgccgc gcgccgaagc gccgatgtcg
     1741 agggccatgc ggatgccgtc gccgacgttg aagcgcgtgc cgcgcacctt ggcgagatcc
     1801 cagcccggac cgagatagcg cgtgcgccat tcggggttcg cctggaagcc gccggcggcg
     1861 agcacgaccg cgcccgccct cacctcctgg gtcctgccct ggcgcttgac gcgcacgccc
     1921 tgcacgccgt cgtcgtcgtg cagcagcgac agggccc
//
LOCUS       DATAIQ010000532         2921 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_120600, whole genome shotgun sequence.
ACCESSION   DATAIQ010000532 DATAIQ010000000
VERSION     DATAIQ010000532.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2921)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2921)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2921
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_120600"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1023
                     /locus_tag="VHN20_08805"
     CDS             <1..1023
                     /locus_tag="VHN20_08805"
                     /EC_number="2.7.8.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-phosphate glucose
                     phosphotransferase"
                     /protein_id="HEX2725902.1"
                     /translation="SALTRRGSFDRRTAVVGGGEAAEAMIKALDAQVDTGIRLVGVFD
                     DRAEDRSPDIVCGYPKLGSTDDLVEYARRTKLDLIIFTLPISAETRLLQMLNKLWILP
                     IDIRLSAHSSRLRLRPRAYSYIGTVPVLDLFDKPIADWDIVLKWLFDKIVGSLLLVLL
                     SPILLLTAIAVKLDSRGPILFRQKRYGFNNELIEVFKFRSMHVDQLDPTAAKLVTRND
                     PRVTRVGRFIRKSSIDELPQLFNVVFRGNLSLVGPRPHALHAKAADRLYDQVVDGYFA
                     RHRMKPGITGWAQINGWRGETDTSEKIQRRVEHDLYYIENWSVFFDLYILAATPFALM
                     KSDNAY"
     gene            1036..2343
                     /locus_tag="VHN20_08810"
     CDS             1036..2343
                     /locus_tag="VHN20_08810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010687093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase family protein"
                     /protein_id="HEX2725903.1"
                     /translation="MTQTTTSASAAEGLASARSGLGHVPVRRLLERIAYALFAVAIAG
                     IGIAFTEPSPYDLAAVLTILLWLLLGLRFPRGALLFLGLLLIYQVSLFAALIPHLDDA
                     VSVVWTALSAYLMITAIFFVMFFSEETDRRVELALRAFTVSCVVAAVAGIMGYFDILN
                     TGALFTRFSRASGTFKDPNVLGSFLILGVLYLSRDLLTGEGRRPLLRFLVLAVLMAGI
                     FLSFSRGSWAATALAVATLVGLAWVTVRAPAVRRRIAALSLGTALIGTVAMAGLLSVE
                     SVREMLTIRAQVTQDYDEGETGRFGNQLRAIPMLLEEPNGFGPLRFRIYFGFEPHNTY
                     LGGFANGGWLAGLSFLGLVLATTYVGFRLALRPSPFQRHGQIVAAANFVLMLQAAQID
                     VDHWRHVFLIWGLVWGLEGARVKWLAAQRRLRIHGLQTGAAAA"
     gene            complement(2392..2598)
                     /locus_tag="VHN20_08815"
     CDS             complement(2392..2598)
                     /locus_tag="VHN20_08815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008973981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725904.1"
                     /translation="MSSDKPLSGTQRQGQSQTGINPGDAAPPGTPGTGENVCPDCKGS
                     GRMGAVACKTCGGTGKIIEGIGGA"
     gene            complement(2800..>2921)
                     /locus_tag="VHN20_08820"
     CDS             complement(2800..>2921)
                     /locus_tag="VHN20_08820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007563612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="carboxyl transferase domain-containing protein"
                     /protein_id="HEX2725905.1"
                     /translation="YIDEVIMPHSTRRRVARALAMLRSKSIEQPWKKHDNIPL"
BASE COUNT          433 a          980 c          924 g          584 t
ORIGIN      
        1 tcggcactga cccggcgcgg cagcttcgat cgccgcaccg ccgtcgtggg cggcggcgaa
       61 gcggcggagg ccatgatcaa ggcgctcgac gctcaagtcg acactgggat ccggctggtc
      121 ggcgtattcg acgatcgcgc tgaagaccgc tcgcccgata tcgtctgcgg ctacccgaag
      181 ctcggctcaa ccgacgacct cgtcgaatat gcgcgccgca ccaagctcga tctgatcatt
      241 ttcacgctgc cgatctcggc cgagacgcgg ctcctgcaga tgctgaacaa gctctggatc
      301 ctgccgatcg atatccggct ctcggcgcat tcgagccggc tgcgcctgcg cccgcgcgcc
      361 tattcgtata tcggcacggt gcccgtgctc gaccttttcg acaagccgat cgccgactgg
      421 gacatcgtcc tgaaatggct gttcgacaag attgtcggct cgctccttct ggtgctgctc
      481 tcgccgatcc tgctgctcac cgcgatcgcg gtgaaactcg actcgcgcgg tcccatcctg
      541 ttccggcaga agcgctacgg cttcaacaac gagctgatcg aggtgttcaa gttccggtcg
      601 atgcatgtcg accagctcga cccgacggcc gcaaagctcg tgaccaggaa cgatccgcgc
      661 gtgacgcgcg tcggccgctt catccgcaag agctcgatcg acgagttgcc gcagctgttc
      721 aacgtcgtgt tcaggggcaa cctgtcgctc gtggggccgc ggccgcatgc gctgcacgcc
      781 aaggccgccg accgcctcta cgaccaggtc gtcgacgggt atttcgcgcg tcacaggatg
      841 aagccgggca tcaccggctg ggcccagatc aacggctggc gtggcgaaac cgacacgagc
      901 gagaaaattc agcgccgcgt cgagcatgac ctctattaca tcgagaactg gtcggtattc
      961 ttcgacctgt acatcctggc cgcgaccccg ttcgcgctga tgaagtctga taacgcctac
     1021 tgaccggctc cccggatgac gcagaccacg acctcggcca gcgccgcgga gggacttgca
     1081 tcggcacgaa gcggcctcgg gcatgtgccc gtgcggcgcc tcctcgagcg catcgcctat
     1141 gcgctgttcg cggtagcgat tgcgggcatc ggcatcgctt tcaccgagcc gtctccgtac
     1201 gatcttgccg cggttctcac gatcctgctc tggcttcttc tcggcctgcg cttcccgcgc
     1261 ggcgcgctgc tctttctcgg gctgctgctg atctatcagg tgagcctgtt cgcggcgctg
     1321 atcccgcatc tcgacgatgc ggtgtcagtc gtctggacgg cgctgtcggc gtatctgatg
     1381 atcaccgcga tcttcttcgt gatgttcttc tccgaggaga cggaccggcg cgtcgagctg
     1441 gcgttgaggg ccttcacggt gagctgcgtc gtcgccgccg tcgccggcat catgggctat
     1501 ttcgacatcc tgaacacggg cgccctcttc acccgcttca gccgggcgtc cggcacgttc
     1561 aaggatccca atgtcctcgg ctcgttcctg atcctcgggg ttctgtatct ttcgcgtgat
     1621 cttctcaccg gcgagggccg gcggccgctg ctgcgcttcc tggtgctcgc ggtcctgatg
     1681 gcgggcatct tcctgtcatt ttcccgcggt tcctgggccg ccacggccct cgccgtggcg
     1741 acgctcgtcg gtctcgcctg ggtcacggtc agggccccgg ccgtgcgccg gcgtatcgca
     1801 gcgctgagcc tgggcaccgc cctgatcggc acggtcgcca tggccggtct cctgtcggtc
     1861 gagagcgtgc gcgagatgct gacgatccgg gcgcaggtca cccaggatta cgatgagggc
     1921 gagacgggcc ggttcggcaa ccagctgcgc gccattccca tgctgctcga ggaacccaac
     1981 gggttcgggc cgctgcgctt ccgcatctat ttcggcttcg agccgcacaa cacctatctc
     2041 ggcggcttcg ccaatggcgg ctggctggcc gggctgtcgt tcctcggcct cgtgctggcg
     2101 acgacctatg tcggttttcg cctggcgctg cggccctcgc cgtttcagcg gcacggccag
     2161 atcgtcgccg cggccaattt cgtgctgatg ttgcaggccg cccagatcga cgtcgaccac
     2221 tggcgccacg tgttcctgat ctgggggttg gtgtggggcc tcgagggcgc gcgcgtgaaa
     2281 tggctcgccg cacagcggcg gttacgcatc cacggcctgc agacgggtgc cgccgcggcc
     2341 tgacatcccg cgaatcgctg ggtgggaccg caattctgcg gtcgatcgga cttaagcccc
     2401 gccgattcct tcgatgatct tgccggtgcc gccgcaggtc ttgcaggcca cggcccccat
     2461 gcggccgctg cctttgcagt cggggcagac attctcgccc gtgcccggag taccgggcgg
     2521 cgcggcatcc cccggattga tcccggtttg gctctggccc tggcgctggg tgcccgacaa
     2581 aggtttgtcg ctgctcataa gctccctccg tgacgaggcg accatcggga taacgtgagg
     2641 gcaggaccgg agttgcagga tcacaggctc gcgccctcga acgaccggag ctcatgctct
     2701 cgagcatgat ccggcgaagt ggataccgct tcaccgagaa agatcatgcg gctcaataag
     2761 aaatagagcg ggatcgattc aatctgaatt gatcccgttc tagagaggga tgttgtcgtg
     2821 cttcttccat ggctgctcga tgctcttcga gcgcagcatg gcgagcgccc gcgccacgcg
     2881 ccgacgggtc gagtgcggca tgatcacctc gtcgatgtag c
//
LOCUS       DATAIQ010000533         4110 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_397078, whole genome shotgun sequence.
ACCESSION   DATAIQ010000533 DATAIQ010000000
VERSION     DATAIQ010000533.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4110)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4110)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4110
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_397078"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(50..187)
                     /locus_tag="VHN20_08825"
     CDS             complement(50..187)
                     /locus_tag="VHN20_08825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725906.1"
                     /translation="MSVAAAHEVGGARQAFGRGDVGAAAQKQRDLRSLGTAALLRCER
                     L"
     gene            203..1585
                     /locus_tag="VHN20_08830"
     CDS             203..1585
                     /locus_tag="VHN20_08830"
                     /inference="COORDINATES: protein motif:HMM:NF024986.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pentapeptide repeat-containing protein"
                     /protein_id="HEX2725907.1"
                     /translation="MLPAAHKIVGPTAMTALAPHLDHAGGWIKLFVQFCTVHDQHYAW
                     SHTHGMEHLGLPDLECRTALNDAAMGEQLILGCIHHLMKHGGDALNIGDFVAAEEEGE
                     RLLSRFWICPPREVVDHDYGAYGAVQLVPDRRPYDADGNLMDAVSQLTSIIAAKNRAR
                     DLDLHDAQLAGIELSHLEADRLDLRHADLAGARLCGAGLRDCRLDEATLEGCDCSGAT
                     VRQCVLDGVHGSGLRFDGARLEDSSARGADLARASILDARLTETSFARAVLREAVFDE
                     ATGDGVEFRGADLSRASLRGVQLDEADFRGADLTDADLSGGRFRGADFRGAILDGTRF
                     DGADCEGAGFDNGEGPQADQHVCDPEEAAASQDATAEAVLHEGWAALHGVLAAFGAQN
                     ADVLDQLQRAATAIDASPDEPPEDWKPWLEPLMKMANGEQPLDLQRILAALSSLAQAG
                     RSREDGADPP"
     gene            2768..>4110
                     /locus_tag="VHN20_08835"
     CDS             2768..>4110
                     /locus_tag="VHN20_08835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HEX2725908.1"
                     /translation="MTRDPRLPFLADLERKVLWLSTWTIHNANHLRDNPDGLKVGGHQ
                     ASSASLATIMTALYFAVLRPQDRVAVKPHASPIFHAIQYLLGHQTRDKLEAFRGFKGA
                     QSYPSRTKDVDDVDFSTGSVGLGVAQTLFASLVQDYVRAHGWGTEWPEGRMIALAGDA
                     EMDEGNIFEALLEGWKQGLRNCWWIIDYNRQSLDAVIREGLYARFEALFRAFGWDVVI
                     LKYGSLQEEAFREPGGEQLRHWIDNAPNQLYSALTYQGGAAWRRRLLDDLGDQGAVTQ
                     LIEKRSDDELARLMGNLGGHDLPSLVQAFEGIDHDRPVVFIAYTIKGFGLPLAGHKDN
                     HAGLLTPTQLDGYRASANVRPGHEWDRFEGLSLPRDALERFLAEVPFNREGTRRRHGT
                     QFKFDGIFPMPKQAAMSTQQGFGLILNELARSDEPIAERIVTTSPDVTVSTNLGP"
BASE COUNT          656 a         1418 c         1338 g          698 t
ORIGIN      
        1 gcggctcgcg ccgccgttcc ctccgctcgc cggccatctg gccgataaat cacaaccgct
       61 cacacctgag gagcgccgcc gtgccgaggc tgcgcaggtc gcgctgcttc tgcgctgcag
      121 cgccgacatc cccccggccg aacgcctgcc gggcgccgcc gacctcatgc gccgctgcta
      181 cgctcatggc gccatcgcga tcgtgctgcc cgccgcgcac aagatcgttg gtccgaccgc
      241 catgacagcg ctcgcgccgc atcttgacca tgcgggcggg tggataaagc ttttcgttca
      301 attctgcacc gttcacgatc aacattatgc ttggtcccac acacacggca tggagcacct
      361 cggccttccc gacctggagt gccgcaccgc gctcaacgat gcggcgatgg gagagcagtt
      421 gatccttggg tgcattcacc acctgatgaa gcacggcgga gacgcgctca atatcggcga
      481 cttcgtcgct gccgaagagg aaggcgagcg cctgctttcg cggttctgga tctgcccgcc
      541 gcgcgaggtg gtcgatcatg actacggcgc ctatggtgcc gtgcagcttg tgcctgacag
      601 gcggccctac gatgccgacg gaaacctgat ggacgcagtc tcgcagctga cgtcaatcat
      661 cgcggcgaag aaccgcgccc gcgatctcga tctgcacgac gcccagcttg caggcatcga
      721 gctttcgcac ctcgaggccg atcggctcga ccttcgccat gccgaccttg cgggcgccag
      781 gctatgcggg gcgggcctcc gagattgccg gctggacgaa gcgactttgg agggctgcga
      841 ctgctcgggc gcgaccgtgc gccagtgcgt gctcgatggc gtgcatggct ccggcctccg
      901 cttcgacggc gcgcgcctgg aggacagctc ggccaggggc gctgatctgg cccgcgcgag
      961 cattctcgat gcgcggctca ccgaaacgtc gttcgcgcgc gcggttctgc gcgaagcggt
     1021 gttcgacgaa gcgacaggtg acggcgtcga gttccgcggc gccgatctgt cgcgcgccag
     1081 cttgcgcggc gtgcagctcg acgaggccga ttttcgcggc gccgatctca cggacgccga
     1141 cctctcggga ggacgtttcc gtggcgccga ctttcgcggc gccattcttg acggcacccg
     1201 cttcgacgga gccgattgcg aaggtgcagg tttcgacaac ggtgagggac cacaagccga
     1261 ccagcacgtg tgcgacccgg aggaggctgc ggcctcgcag gacgcgaccg cggaggctgt
     1321 gctgcatgaa gggtgggccg ccctgcatgg cgtgctggcg gcattcggcg cgcagaacgc
     1381 ggatgtcctc gatcagctgc aacgggcagc cacggccatc gatgcgtccc cggatgagcc
     1441 gccggaagac tggaagccct ggctcgagcc gttgatgaag atggcgaatg gcgagcagcc
     1501 gctcgatctc cagcggatac tcgcggccct gtcctcgctt gcgcaagctg gacggtcgcg
     1561 cgaggacggt gcagacccgc cataggccac tggcggccat cgcagcggcc tgatgacagc
     1621 gtggcgcgtg atcttcgcgc ggtgagttcg gaggcagcac atggctgtaa tcacgaggaa
     1681 cgggctgcaa gagcgcagga agggcagcgg cgggaatcaa acaccgccac catccccgcg
     1741 cccgcaacgc gccgcttcgg ccggcgtccc gcgattcctg caggcgcaag ccggcggtca
     1801 acggcagctt tattatctcc ggtccgaaaa gaacccagcc ctgcacggct tcgccaacga
     1861 gccgtcgggg agcagcttgc ccccggaaca aggtccctgg cggctcctgc gcgccgtcac
     1921 gccggttaac gagtggaccc ctgcggccga cagggaaaca gtcatggctg cgatcgacct
     1981 gaagggcttc gcgctcgttg aacgagcggg cgagctgagc ttcgccgcaa ttccggcgga
     2041 gccgctcgcc ggggagtaac cgggggcggc cagggattgt tacccatgtc tccggaacgg
     2101 tctgtcacct atgtctccgg gccagaccga tgtgaagttg gtgagcgcgg atggattcga
     2161 accatcgacc cgctgattaa cgtaccgcta cggctttcgc cgccctcgcc cgtgcgaggt
     2221 ttgcagtctg gactttccct tcaccctggc cggctcgcgc cggctttagg tgggcgccgt
     2281 caagtctcta caccttcccc ttgcggggct tggctcggga ttgccgtcgc cgcgacgcgg
     2341 acgggttccc cgaatttgac gccatcccgc cggcggtttc ccgtccggcg gctccgatcg
     2401 aagtcagctg ctctacccct gagctacgcg cccgatcact caacttcact tctgatcccg
     2461 cctcgcatct cccggctttt ggccgttcgc ctgcccggcg gcgcttcggt ccgtcgaagc
     2521 gggccgaagg cgtttcgaag ccggcctcag ataggcgcta gggcgtgccg ggtcaaccaa
     2581 agcccacagg ccggggttcc ggggccgctt tggggtgcag gacgggccac ttcggcgacg
     2641 gaattgctcc ggtgcgggct ccctccagtg agtcgccccc ttaagtcgca ggatttgtcg
     2701 ggcgagcggt ggccacttcg ccgagcgatg ctttaagctg ccgcatcgca tccatctggt
     2761 gacgcgcatg actcgcgacc cgcgcctgcc ctttctcgcc gatctcgaac gcaaggtgct
     2821 gtggctctcc acctggacga tccacaacgc caaccacctg cgggacaacc cggacggcct
     2881 caaggtcggc ggccaccagg cctcctcggc ctcgctcgcg accatcatga cggcgctcta
     2941 tttcgcagtg ctgcggccgc aggaccgcgt cgccgtcaag ccgcatgcga gccccatctt
     3001 tcacgccatc cagtacctgc tcggtcacca gactcgcgac aagctcgagg ccttccgcgg
     3061 cttcaagggc gcgcagtcgt acccctcgcg caccaaggac gtcgacgacg tcgatttctc
     3121 caccggctcg gtcgggctcg gtgtcgcgca gacgctgttc gcgagcctcg tccaggatta
     3181 cgtgcgcgcg catggctggg gcacggagtg gcccgagggg cgcatgatcg ccctcgccgg
     3241 ggacgccgag atggacgagg gcaacatctt cgaggcgctg ctcgagggct ggaagcaggg
     3301 cctgcgcaat tgctggtgga tcatcgacta caaccgccag agcctcgacg cggtcatccg
     3361 cgaaggcctt tacgcgcgct tcgaggcgct gttccgcgcc ttcggctggg acgtggtgat
     3421 actcaaatac ggctcgctcc aggaagaggc cttccgcgag cccggcggcg agcaattgcg
     3481 ccattggatc gataacgcgc cgaaccagct ctactccgcc ctcacctatc agggcggtgc
     3541 cgcgtggcgg cggcgcctgc tcgacgatct cggcgaccag ggtgccgtca cgcagttgat
     3601 cgagaagcgc tccgacgacg agttggcgcg gctcatgggc aacctcggcg gccacgacct
     3661 gcccagcctc gtgcaggcgt tcgagggcat cgaccacgac cgtcccgtcg tgttcatcgc
     3721 ctacacgatc aaagggtttg ggctgccgct cgccggccac aaggacaacc atgccgggct
     3781 gctcacgccg acacagctcg acggctaccg cgcctccgcc aacgtgcgcc ccggccatga
     3841 atgggaccgt ttcgaggggc tgtcgctgcc ccgcgatgcg ctggagcgtt tcttggccga
     3901 ggtcccgttc aaccgcgaag gcacccgccg acggcatgga acgcaattca agttcgacgg
     3961 catctttccg atgccgaagc aggcggccat gtcgacccag cagggtttcg ggctgattct
     4021 caacgagctg gcgcgctcgg acgagccgat cgctgaacgc atcgtcacca cctcgccgga
     4081 cgtgaccgtc tcgaccaatc tcgggccctg
//
LOCUS       DATAIQ010000534         7095 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_27590, whole genome shotgun sequence.
ACCESSION   DATAIQ010000534 DATAIQ010000000
VERSION     DATAIQ010000534.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 7095)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7095)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7095
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_27590"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(67..564)
                     /locus_tag="VHN20_08840"
     CDS             complement(67..564)
                     /locus_tag="VHN20_08840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEX2725909.1"
                     /translation="MRGKRRSYEAGHRPKFLVIVDESPECDRAIHFAARRVARTGASL
                     IMLGVVTPPDNFEWLGVGDAMRAEAEDEAQERLEAAAGTARTVAGVDPELVVRVGDKA
                     DAITHLIEEDEDISFLVLAAGTGKEGPGPLVSTLAGKMAGTFLIPVVIVPGSLSDDEI
                     EALAG"
     gene            complement(618..1658)
                     /gene="trpS"
                     /locus_tag="VHN20_08845"
     CDS             complement(618..1658)
                     /gene="trpS"
                     /locus_tag="VHN20_08845"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019199050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004830 - tryptophan-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006436 - tryptophanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HEX2725910.1"
                     /translation="MAQFKERVFSGVQPTGNLHLGNYLGAITRFAALQDAYDCIYCVV
                     DLHAITVPQDPAELRDQIREVTAAFIASGIDPKKHIVFNQSQVPEHAELAWIFNCVAR
                     VGWLNRMTQFKEKAGKDRENASVGLYVYPTLMAADILAYRATHVPVGDDQKQHLELSR
                     DIAQKFNNDWATSIAAHGFGEAFFPLPEPLIQGPATRVMSLRDGAKKMSKSDPSDYSR
                     INLTDDADAVAQKIRKAKTDPEPLPSEEAGLEKRPEADNLVGIFAALRNTGKADVLRE
                     YGGAQFSTFKAALVDLAVAQIGPIGEEMRRLKSDPAHIDAVLVAGADRAGVIARETMN
                     AVKDIVGFVRRR"
     gene            complement(1729..2550)
                     /gene="fabI"
                     /locus_tag="VHN20_08850"
     CDS             complement(1729..2550)
                     /gene="fabI"
                     /locus_tag="VHN20_08850"
                     /EC_number="1.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003604003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase FabI"
                     /protein_id="HEX2725911.1"
                     /translation="MAGLMQGKRGLVMGVANDHSIAWGIAKTLADHGAALAFTYQGEA
                     LGKRVTPLARSLGSDLVVPCDVEDLASVDAAFAAVDEAWDGLDFIVHAIAFSDKNELK
                     GRYADTTRQNFCKTMLISCFSFTEIAKRAAPRMRNGGSMVTLTFGGSTRVMPNYNVMG
                     VAKAALEASVRYLASDYGPQNIRVNAISAGPVRTLAGAGIADARLMFNYQKAHSPLRR
                     SVTLDEIGGSTLYLLSDLSGGVTGEIHYVDSGYNIISMPRPDVLKVQEAAGVTGE"
     gene            complement(2718..3941)
                     /gene="fabB"
                     /locus_tag="VHN20_08855"
     CDS             complement(2718..3941)
                     /gene="fabB"
                     /locus_tag="VHN20_08855"
                     /EC_number="2.3.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009796638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase I"
                     /protein_id="HEX2725912.1"
                     /translation="MRRVVVTGMGIVSSIGNNTQEVLASLREARSGISKAPEYEKLGF
                     RCQVHGAPSLNADDAVDRRAMRFHGGGTGWNHVAMEQAIRDAGLEANEVSNDRTGIIM
                     GSGGPSTRTIVEAADIARSKGPKRVGPFAVPKAMSSTASATLATWFKIKGVNYSISSA
                     CATSNHCIGNAYELIQLGKQDVIFAGGCEELDWTLSVLFDAMGAMSTKYNDRPETSSR
                     AYDVNRDGFVIAGGAGVVVLEELEHAKARGARIYGEVVGYGATSDGHDMVAPSGEGAV
                     RCMRMALQNVKVPIDYINPHATSTPVGDEKEIEAIRQVFGAGDKCPPIAATKSLTGHS
                     LGATGVQEAIYSLLMMNNGFICESANIEELDPAFADMPIVRERVDDAKISCVLSNGFG
                     FGGTNATIVMKRLDA"
     gene            complement(4020..4541)
                     /gene="fabA"
                     /locus_tag="VHN20_08860"
     CDS             complement(4020..4541)
                     /gene="fabA"
                     /locus_tag="VHN20_08860"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019171 -
                     (3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-[acyl-carrier-protein] dehydratase
                     FabA"
                     /protein_id="HEX2725913.1"
                     /translation="MARQSSYTYEELLACGRGELFGPGNAQLPLPPMLMFDRISAISE
                     EGGEHGKGHVRAELDVRPDLWFFPCHFKGDPVMPGCLGVDALWQMVGFFLGWLGSPGR
                     GRALGVGVVKFSDQVLPTVKKVVYGVDFKRVFRSKLVLGVADGWLEADGRRIYEAKDL
                     RVGLFKPEATAPA"
     gene            4784..5284
                     /locus_tag="VHN20_08865"
     CDS             4784..5284
                     /locus_tag="VHN20_08865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020187202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fur family transcriptional regulator"
                     /protein_id="HEX2725914.1"
                     /translation="MSEEATDTIALPQPIAALGAHGDRSAVRKGCPLSSLRERLRRVG
                     LRPTRQRISLGWLLFGKGDRHITAELLYDEAMRARVPVSLATVYNTLHQFTEAGLLRQ
                     LAVDGAKAYFDTNTTDHHHFFIEGDESLMDVPDAAISVGDLPEPPEGMEIARVDVVVR
                     LRRKRS"
     gene            complement(5363..5881)
                     /locus_tag="VHN20_08870"
     CDS             complement(5363..5881)
                     /locus_tag="VHN20_08870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HEX2725915.1"
                     /translation="MAASAACLVAGPAGAAGEASTGKVTGLPVPRYVSLKTDRVNLRE
                     GPSKDHRTAWVFQRAGLPVEIVAEFETWRRIRDAEGTEGWVLHSLLSGRRTALVTPWA
                     KGEVPPILLYERADERAEVVARLQSGVLANVRQCSGSWCRVVVAQANSRDLDGYIRQD
                     RLWGVYPNERVE"
     gene            6053..7045
                     /locus_tag="VHN20_08875"
     CDS             6053..7045
                     /locus_tag="VHN20_08875"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008465 - glycerate dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycerate dehydrogenase"
                     /protein_id="HEX2725916.1"
                     /translation="MKKRPLVVVTRRLPGVVETRMRELFDARLNLEDKPLSPEALVDA
                     VKSADVLVPTVTDEIDAPLLAQAGPNLKLIANFGNGVDNIDVQAALTRGITVTNTPGV
                     LTEDTADMTMALILSVARRVAEGAKVIPEGDWAGWSPTWMLGHRITGKRLGIVGMGRI
                     GQALARRARAFGLSIHYHNRRHVAPQIEEELEATYWDSLDQMLARMDIVSVNCPHTPA
                     TYHLLSARRLKLMKPDAVIVNTARGEIIDETALARLIEADSIAGAGLDVFEHEPAVNP
                     RLVKLARQGKVVLLPHLASNTVEGRIDMGEKVIVNIKTFMDGHRPPDRILPSML"
BASE COUNT         1144 a         2395 c         2357 g         1199 t
ORIGIN      
        1 ggtgaatagc tgataacctg ttggggtgta gcgtcgactg gccggcccgg cccattcggc
       61 tctgccctac ccggccaggg cctcgatctc gtcgtcggac aggctgcccg gaacgatcac
      121 gaccgggatc aggaaggtgc cggccatctt gccggccagc gtcgacacca gcggccccgg
      181 gccttccttg cccgtgccgg cggccagcac caggaacgag atgtcctcgt cctcctcgat
      241 caggtgcgtg atcgcgtccg ccttgtctcc gacgcgcacg accagttccg gatcgacccc
      301 ggcaacggtg cgcgccgtgc cggccgccgc ttcgaggcgc tcctgcgctt cgtcctcggc
      361 ctctgcccgc atggcgtcgc cgacgccgag ccattcgaaa ttgtccggcg gggtaacaac
      421 cccgagcatg atcaggctgg cgccggtgcg cgcgacgcgc cgcgccgcga agtgaatggc
      481 gcggtcgcat tccggggact cgtcgacgat gacgagaaac ttgggccggt ggcccgcctc
      541 gtaggaccga cgcttgccgc gcacgtccat ggctccttcc cctttcatgc tgccccggac
      601 gtcgtcgggc gacaagctca acggcgtcgc acgaagccga cgatgtcctt gacggcgttc
      661 atcgtctcgc gggcgatcac gccggcgcga tcggcgccgg cgacgagcac cgcatcgata
      721 tgggcggggt cgctcttgag gcgccgcatc tcctcgccga tcggcccgat ctgtgccacc
      781 gcgagatcga ccagcgccgc cttgaaggtc gagaattgcg caccgccgta ttcgcggagc
      841 acatcggcct tgccggtgtt gcgcagggcc gcgaagatgc cgacgaggtt gtcggcctcc
      901 gggcgttttt cgaggccggc ctcttcggac ggcaacggct cgggatcggt tttcgccttg
      961 cggatcttct gcgccacggc atcggcatcg tcggtgaggt tgatgcgcga atagtctgat
     1021 ggatcggatt tcgacatctt cttcgccccg tcgcgcaggg acatcacgcg cgtcgcggga
     1081 ccctggatga gcggctccgg caacgggaag aaggcctcgc cgaagccgtg cgcggcgatc
     1141 gaggtcgccc agtcgttgtt gaacttctgg gcgatgtccc gcgacagctc gagatgctgt
     1201 ttctggtcgt cgccgaccgg cacatgggtg gcgcggtagg cgaggatgtc ggcggccatc
     1261 agggtcggat agacgtaaag cccgacgctc gcgttctcgc gatccttgcc ggccttttcc
     1321 ttgaactgcg tcatgcggtt gagccagccg acccgggcga cgcagttgaa gatccaggcg
     1381 agctcggcgt gttccggaac ctgcgactgg ttgaacacga tgtgcttctt ggggtcgatg
     1441 ccgctggcga tgaaggctgc ggtcacctcg cggatctggt cgcgcagctc ggccgggtcc
     1501 tgcgggaccg tgatcgcatg cagatcgacg acgcagtaga tgcagtcata ggcgtcctgc
     1561 agcgcggcga agcgggtgat cgcgccgagg taattgccga gatgcaggtt gcccgtcggc
     1621 tggacgcccg agaacacccg ctccttgaac tgcgccatca actccgctcc ttgcaagatg
     1681 cggccttatg taaggcgaaa tctcgcaagg caagggtggc agggccgctt actcaccggt
     1741 gacgccggcc gcttcctgga ccttgagcac gtcggggcgc ggcatcgaga tgatgttgta
     1801 gccgctgtcc acgtagtgga tttccccggt caccccgccc gacaggtcgg acagaaggta
     1861 aagcgtcgag ccgccgatct cgtcgagggt gacggagcgg cgcaatggcg aatgcgcctt
     1921 ctggtaattg aacatcaggc gggcatcggc gatgccggcg cccgcgagcg tgcgcaccgg
     1981 gccggccgag atggcgttga cgcggatgtt ctgggggccg tagtcgctgg cgaggtagcg
     2041 cacgctcgcc tcaagggcgg ccttggcgac ccccatgacg ttgtaattcg gcatgacgcg
     2101 ggtcgagccg ccgaaggtga gcgtcaccat cgacccgccg ttgcgcatcc gcggcgccgc
     2161 ccgtttggcg atctccgtga aggaaaagca ggagatcagc atcgtcttgc agaaattctg
     2221 ccgcgtcgtg tcggcgtagc gccccttgag ctcgttcttg tccgagaagg cgatggcgtg
     2281 gacgatgaaa tcgagcccgt cccaggcctc gtcgacggcg gcgaaggccg cgtcgaccga
     2341 ggccagatcc tcgacgtcgc acgggacgac gaggtcagag ccgagcgagc gggccagcgg
     2401 cgtcacgcgc ttgcccaggg cctcgccctg gtaggtgaag gcgagggcgg cgccgtgatc
     2461 ggccagggtc ttggcgattc cccaggcgat cgagtgatcg ttggcgacgc ccatgacaag
     2521 gccgcgtttg ccctgcatca accccgccac gcgaactcct ttatcacttg ccggtcctgt
     2581 ggaatgctcg aggccggcgc cgtcgggcct ctcgtcaagc atcattaacg tggcgtccgt
     2641 gagcgtgtcc atgcgcgtcc cccgtcgtgc gtcgcaggcg aatcgcatgc tggcacttca
     2701 cggacggaac agtccagtca cgcgtcaagc cgcttcatca caattgttgc gtttgtgccc
     2761 ccaaagccaa agccgttcga caggacgcag ctgatcttgg catcgtcgac gcgctcgcgc
     2821 acgatcggca tgtcggcaaa ggccgggtcg agctcctcga tgttggcgct ctcgcagatg
     2881 aagccgttgt tcatcatcag cagggagtag atcgcctcct ggacgccggt ggcgccgagg
     2941 gaatggccgg tgagcgactt ggtggcggcg atcggcgggc atttgtcgcc ggcgccgaac
     3001 acctgccgga tcgcctcgat ctccttctcg tcgccgactg gcgtcgaggt ggcgtgcggg
     3061 ttgatatagt cgatcggcac tttgacgttc tgcagggcca tgcgcatgca gcgcacggcg
     3121 ccctcgccgg acggcgccac catgtcgtgg ccgtccgacg tcgccccgta gccgacgacc
     3181 tcgccgtaga tgcgcgcgcc gcgcgccttc gcatgctcga gctcttcgag gacgacgacg
     3241 ccggcgccgc cggcgatgac gaagccgtcg cggttgacgt cgtaggcgcg cgacgaggtc
     3301 tcgggccggt cgttatattt ggtcgacatc gcgcccatgg cgtcgaacag caccgacagc
     3361 gtccagtcca gctcttcgca gccgccggcg aatatcacgt cctgcttgcc gagctggatc
     3421 agctcgtagg cgttgccgat gcaatgattc gaggtcgcac aggcggacga gatcgaatag
     3481 ttcacgccct tgatcttgaa ccaggtggcg agcgtggccg acgccgtcga cgacatcgcc
     3541 ttcggcaccg cgaacgggcc gacccgcttg gggcccttgc tgcgggcgat atcggcggct
     3601 tcgacgatcg tacgcgtcga cggcccgccg gagcccatga tgatgccggt gcggtcgttg
     3661 gaaacctcgt tcgcctcgag cccggcgtcg cggatcgcct gctccatggc gacgtggttc
     3721 cagccggtgc cgccgccgtg gaagcgcatg gcgcgtcggt cgacggcatc gtcggcattg
     3781 agcgaaggcg cgccgtgcac ctggcagcgg aatccgagct tctcgtattc cggcgccttg
     3841 ctgatgccgg atcttgcttc gcgcagcgac gccagcacct cctgggtgtt gttgccgatg
     3901 gacgaaacga tacccatccc ggtgacgacg acgcgtctca tcccgaactc cccgaccagc
     3961 cccgtgcgct cacgtaaggg cggccgctct tattctcaac gtttcggaca aaacaatggt
     4021 taggctggcg ccgttgcctc gggcttgaac agccccacgc gcaggtcctt ggcctcgtag
     4081 atgcggcggc catccgcctc gagccagccg tcggcgacgc ctaggacgag cttcgagcgg
     4141 aagacgcgct tgaagtcgac gccatacacc accttcttga cggtcggcag cacctggtcg
     4201 ctgaacttga ccacgccgac cccgagcgcg cggcctctgc cgggcgagcc cagccagccg
     4261 aggaagaagc cgaccatctg ccacaaggcg tcgacgccga ggcagccggg catcaccggg
     4321 tcgcccttga agtggcacgg gaagaaccag aggtccgggc gcacgtccag ctcggcgcgc
     4381 acatgcccct tgccgtgctc gccgccttcc tcggagatcg ccgagatccg gtcgaacatc
     4441 agcatcggcg gcaggggcag ctgcgcgttg cccggaccga acaattcgcc tcgcccgcag
     4501 gcgaggagtt cttcgtaggt atagctcgac tggcgggcca tgccgttggc cgatcctttc
     4561 cggaaagcat gtgggagcac gggatttgcc cgttagatcg cgcgctctgg tagcacaagg
     4621 gcaaagtggg tcaaagtggc ggtcccgggt gtggtggggc gaaccgggga ttctttgtcg
     4681 cgcacactcc tcccgcctcc gggatcgtcc cgagttgcgg ggcttggctt ggctccctat
     4741 gattgtaaaa cgagccacgc aatcccgcgt tccgaaaccc gcgatgtccg aagaagcaac
     4801 tgacacgata gctttgccgc aaccgatcgc ggcgttgggg gctcatggcg acaggtcggc
     4861 cgtgcggaaa ggctgcccgc tgtcgagcct gcgcgaacgg ctgcgccggg tcggcctcag
     4921 gccaacgcgg cagcggatct ccctcggctg gctgctgttc ggcaagggtg accggcacat
     4981 cacggccgaa ctgctctatg acgaggccat gcgcgcccgc gtgccggtgt cgctggccac
     5041 ggtctacaac accctgcacc agttcacgga ggcgggcctg ctgcgccagc tcgcggtcga
     5101 cggcgccaag gcctatttcg acaccaacac cacggaccac catcatttct tcatcgaggg
     5161 cgacgagagc ctgatggacg tgcccgacgc cgccatctcg gtcggcgacc ttcccgagcc
     5221 tccggaaggg atggagatcg cccgcgtcga cgtggtcgtg cgcctgcgcc gcaagcgcag
     5281 ctgacgccgc tcgcgctctt ccacagctat ctctgtccta tcgtttaacg cagggtgagc
     5341 ccggcggcat ccgccgcgcg cgtcattcga cgcgctcgtt ggggtagacg ccccacagcc
     5401 ggtcctggcg gatatagccg tcgaggtcgc gggaattggc ctgcgcgacc acgacccggc
     5461 accaggagcc ggagcattgc cgcacattgg cgaggacgcc cgactgcagg cgcgcgacca
     5521 cctcggcgcg ctcgtcggcg cgctcataaa ggaggatcgg cggcacctcg cccttcgccc
     5581 agggcgtgac cagcgccgtg cgtcgtccgg acagcagcga atgcagcacc cacccctcgg
     5641 tgccctcggc gtcgcgaatg cgccgccagg tctcgaactc ggccacgatc tcgaccggca
     5701 gcccggcccg ctggaacacc caggcggtgc ggtggtcctt cgacggccct tcgcgcaggt
     5761 tcacgcggtc ggtcttgagg ctcacgtagc ggggaaccgg gaggccggtg accttgcccg
     5821 tgctcgcctc gccggccgcc ccggccgggc cggccacgag gcaggcggcg cttgccgcca
     5881 tcacgaagca tcggatcgtg cgcaagccga ctctcccatc gcattgtctt tgggctaacc
     5941 tctgctagag aggcgaccag ggaaccgcaa tgaggcggct tgccgccatc tcttgccgag
     6001 acctgttaac gatgcgtgaa gcaccgtcgc aagccgagca tgggaaggca ggatgaagaa
     6061 gaggccactg gtcgtcgtca cccgtcgcct tcccggtgtc gtcgagaccc gcatgcgcga
     6121 gctgttcgac gcgcgcctca acctcgagga caagccgctg tccccggaag cgctcgtcga
     6181 cgcggtgaag agcgccgacg tgctcgtgcc gactgtcacc gacgagatcg atgcgccgct
     6241 gctcgcccag gccggcccga acctcaagct gatcgccaat ttcggcaacg gcgtcgacaa
     6301 catcgacgtg caggcggcgc tgacgcgcgg catcacggtc accaacacgc ccggcgtcct
     6361 caccgaggac acggccgaca tgaccatggc gctgatcctg tcggtggcgc gccgcgtcgc
     6421 cgaaggcgcc aaggtgattc cggaaggcga ttgggccggc tggtcgccga cctggatgct
     6481 cggccaccgc atcaccggca agcgcctcgg gatcgtcggc atgggccgca tcggccaggc
     6541 gctggcgcgc cgcgctcgcg ccttcggcct ctcgattcac taccacaacc gacgccacgt
     6601 ggcgccgcag atcgaggagg agctcgaggc gacctactgg gactcgctcg accagatgct
     6661 ggcgcgcatg gacatcgtgt cggtgaattg cccgcacacg cccgccacct atcatctgct
     6721 ctcggcgcgc cgtctcaagc tgatgaaacc cgacgccgtc atcgtcaaca cggcgcgcgg
     6781 cgagatcatc gacgagacgg cgctcgcgcg cctgatcgaa gccgacagca tcgccggcgc
     6841 cgggctcgac gtgttcgagc acgagcctgc cgtcaatccg cgcctcgtca agctcgcccg
     6901 ccagggcaag gtggtcctgc tgccgcacct cgcctcgaac accgtcgagg gccgcatcga
     6961 catgggcgag aaggtcatcg tcaacatcaa gaccttcatg gacggccacc gcccgccgga
     7021 ccgcatcctg ccgagcatgc tttaggttct cgggtctggg cacgttctcc ctccccggag
     7081 ggagggaagg gatgt
//
LOCUS       DATAIQ010000535         1804 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_443087, whole genome shotgun sequence.
ACCESSION   DATAIQ010000535 DATAIQ010000000
VERSION     DATAIQ010000535.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1804)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1804)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1804
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_443087"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..594
                     /locus_tag="VHN20_08880"
     CDS             <1..594
                     /locus_tag="VHN20_08880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012454871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Spy/CpxP family protein refolding chaperone"
                     /protein_id="HEX2725917.1"
                     /translation="MIALCAALLATAALAQDRPDRSDRGERGGDLWRDREWNSDFWRG
                     ERGGRGAAGGERMMGRFSPEDIEAFTDARIAALRAGLKLTAEQEKLWPPLEEAIRALV
                     RQRRDQARAWRESRERDDEDIAARLRALAEQQAARAEALKKLADAVAPLHASFDEGQK
                     RRFNVLTRRMRGEMMQGMGGEMQGMRGGGMRPWHDQR"
     gene            complement(726..935)
                     /locus_tag="VHN20_08885"
     CDS             complement(726..935)
                     /locus_tag="VHN20_08885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725918.1"
                     /translation="MPAYNLFRCKESGEVYCAVPEDCVVPPFVTGELWEFEGKLDGSD
                     TPVGFSQQAARAGVRFNGFYLFHRF"
     gene            1539..>1804
                     /locus_tag="VHN20_08890"
     CDS             1539..>1804
                     /locus_tag="VHN20_08890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725919.1"
                     /translation="MAASTKDIKAHNLAAIESARDGARHMADTARQAAETTQETLRVA
                     AETATETLRRAADQFGRTLGLSSEQGEELARQSTRNLEAVTECGT"
BASE COUNT          320 a          606 c          627 g          251 t
ORIGIN      
        1 atgattgcac tttgcgccgc cctcctggcg acggcggccc tcgcccagga ccgtcctgat
       61 cgcagcgatc gcggcgagcg cggcggcgac ttgtggcggg atcgcgagtg gaacagcgac
      121 ttctggcgcg gcgagcgcgg cggccgcggc gcggccggcg gcgagcgcat gatggggcgg
      181 ttctcgccgg aggacatcga agccttcacc gatgcgcgca tcgccgcgct gcgggccggg
      241 ctcaagctca cggccgagca ggagaagctg tggccgccgc tggaagaggc gatccgcgcg
      301 ctcgtgcggc agcgccgcga ccaggcccgc gcctggcgcg aatcgcgcga gcgcgatgac
      361 gaggacatcg ccgcacggct gcgcgccctc gccgagcagc aggcggcgcg cgccgaggcg
      421 ctgaagaagc tcgccgatgc ggtcgccccg ctgcatgcgt cgttcgacga aggccagaag
      481 cgtcgcttca acgtgctcac gcgccgcatg cgcggtgaga tgatgcaggg catgggcggc
      541 gagatgcaag gcatgcgcgg cggcggcatg cggccgtggc acgaccagcg ctgatcgatc
      601 caaggcggcg gcgtcacgcg acctcgccgc tcgccatccg gacgcaccga gccgcgattc
      661 gcgggaggcc ggttttcagc cgctgatgcg gcgcacctgg gcctctgccg gttcggcgag
      721 atcgatcaga aacggtggaa cagatagaag ccgttgaagc gcacgccggc gcgggccgcc
      781 tgctggctga agccgaccgg cgtgtcgctg ccgtcgagct tgccttcgaa ctcccacagc
      841 tcgccagtca cgaagggcgg caccacgcag tcctcgggca cggcgcagta gacttccccg
      901 ctctctttgc agcggaacaa attataagcc ggcatcgggt gcctcccgct gtgtgtgcga
      961 ttcgcgttta cggggacatc ctgacgacaa tatgacgcgt cggccagccc aggttgagat
     1021 ccgacgcgat atcaaccagt gaacaaggaa aaaccgcggc gaaaccgact tcgtcggtct
     1081 ggcgccacgg ccacgagagc agatcgtaaa ggttgggaat cgccaggaat cgcgcgggag
     1141 ttcctacaac gccgcgggcg gcggtgaatc agctcgccgc catgatcagc aacgggacag
     1201 ccgcgccgac ggttaatccg aggatgaaca tcagggactc gttcgcgccc tctcgctcct
     1261 cgttcattct agtgtcgagc ttcatcacca ttactcgcac cctgcctttc tacacgtcag
     1321 gtgaacgcat ccgatgctgg cggggttcca gcttggcctt gggaaccatc gtgcgccagc
     1381 ggggcctttg cagcgtccgc cacagcggcg ctcgcggcca gctgtccacc gcgatacacc
     1441 gggggcgcgg ccggcccgac gcgaaaaagg cgcttttggc gcgaaccaca ggactcctga
     1501 tcgccgaatc agacgcaaca tgatcgggga ggatcgcgat ggcggcatcg accaaggaca
     1561 tcaaggcgca caatctcgca gcgatcgagt ccgcacggga cggcgcgcgg cacatggccg
     1621 acacggcccg gcaggcggcc gagacgacgc aggagacgtt gcgcgtcgcc gccgaaaccg
     1681 cgaccgagac gctgcgccgg gccgccgatc agttcggccg gaccctcggt ctctccagcg
     1741 agcagggcga ggagctggcg cgccagtcga cccgcaatct cgaggcggtg accgaatgcg
     1801 gcac
//
LOCUS       DATAIQ010000536         3474 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_197275, whole genome shotgun sequence.
ACCESSION   DATAIQ010000536 DATAIQ010000000
VERSION     DATAIQ010000536.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3474)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3474)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3474
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_197275"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..723)
                     /locus_tag="VHN20_08895"
     CDS             complement(<1..723)
                     /locus_tag="VHN20_08895"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX2725920.1"
                     /translation="MQLDFQGRVAAITGGASGIGLAAAARLVRDGARVILLDRDEAAL
                     GRAAADLGTTGITLDVTNRTGVANTVERIEAEHGPIDVLVTAAGVLDPPRPPERISEK
                     AWDDIFAANVNGTRIICQTVGTGMAARGRGSIVTVASIAGLEPGPLAAYGPAKAAVVA
                     LTKALAGAWGRRGVRVNAVAPGYVRTPALERGLFFGVVDERRLADSTALGRLATGDEI
                     AAAIAFLASDAAAAITGIVLPVD"
     gene            925..1725
                     /locus_tag="VHN20_08900"
     CDS             925..1725
                     /locus_tag="VHN20_08900"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018239833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX2725921.1"
                     /translation="MPSPHEARSAVVVTGASGGIGREIAKLAAREGGPVVLIARSADA
                     LAEAAEDVRRAGGEPFTLVLDLSSREAPAEVESFLAAQNLVCRVLVNNAGYGLLGAAA
                     ALPRGDQLGIVDLNIRALTDLTLRFLPGMVARHSGGIINLASVASFLPGPYMALYYAS
                     KAFVRSFSEALSEELRGTGVTVTCVAPGPVATQFLARAGARKVRLFKAFPKVTAEAVA
                     RSAWHGFKRGRRLVVPTVMANLSAFAGAHLPHAFLLPFTARMQRPRNK"
     gene            complement(1732..2364)
                     /locus_tag="VHN20_08905"
     CDS             complement(1732..2364)
                     /locus_tag="VHN20_08905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HEX2725922.1"
                     /translation="MRLKTTRPLLAGLAAAVLGLGAFALYGTGGAGNSATSQCPAAKA
                     ATGRLAPLARGEVAAATVAREPGRLPDLTFNGPDGSPTGLAAFRGRTVLLNLWATWCA
                     PCRQEMPALDKLQGELGGPAFEVVAINIDTRNLEKPKTWLKEAGVGRLAYYADPEAKV
                     FQDLKRIGKAVGMPTTLLIDPDGCELALINGPAEWASEDALRLVRAALAR"
     gene            2388..>3474
                     /gene="argH"
                     /locus_tag="VHN20_08910"
     CDS             2388..>3474
                     /gene="argH"
                     /locus_tag="VHN20_08910"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015823474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004056 - argininosuccinate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HEX2725923.1"
                     /translation="MSNRMWGGRFASGPGEIMEDINASIDFDKRLAPQDIRGSLAHAA
                     MLGRAGILPAEDVAAIETGLKTILGEIESGAFTFSRALEDIHMNVEARLADLIGPTAG
                     RLHTARSRNDQVATDMKLWVRDTIDALDAQLGDLQAALAEKAHAFAGAVMPGFTHLQS
                     AQPVTFGHHLLAYVEMFSRDRGRFADARRRLNESPLGAAALAGTSFPIDRFMTAEALG
                     FDRPTANSLDSVSDRDFVLETVAAAAICAVHLSRFAEEIVLWTSVQFGFVRLSDAFTT
                     GSSIMPQKRNPDAAELVRGKAGRIIGALGALLVVLKGLPLAYSKDMQEDKEGTFDALH
                     SVSLCIAATAGLVRDMEPDVKAMKRWAG"
BASE COUNT          496 a         1221 c         1199 g          558 t
ORIGIN      
        1 atcgaccggc agcacgatgc cggtgatcgc cgcagccgcg tcggaggcga gaaaggcgat
       61 ggcagcggcg atttcgtcgc cggtcgcgag gcggccgagc gcggtggaat cggcaaggcg
      121 gcgttcgtcg acgacgccaa agaacaggcc ccgctcgagc gccggcgtgc gcacatagcc
      181 cggcgcgacc gcgttgacgc gaaccccgcg tcggccccac gcgccggcaa gcgccttcgt
      241 gagcgccacg accgcggctt tcgcgggccc gtaggcggca agcggtcccg gctcgaggcc
      301 ggcaatcgag gcgaccgtga cgatgctgcc ccttcctctt gccgccatgc cggtcccgac
      361 cgtctggcag atgatgcgcg tgccgttcac gttcgccgcg aaaatgtcgt cccaggcctt
      421 ctccgaaatg cgctcgggcg ggcgcggcgg gtcgaggacg ccggcggcgg tcacaagcac
      481 gtcgattggc ccgtgctcgg cctcgatccg ctcgaccgta tttgcgacgc ccgtgcggtt
      541 ggtcacgtcg agggtgatgc cggtcgtgcc gagatcggcg gcggcgcggc cgagagcggc
      601 ctcgtcgcga tcaagcagga tcacccgcgc gccgtcgcgc acaagtcgcg cggccgcggc
      661 aaggccgatg ccgctcgcgc cgcccgtgat cgcggcgacc cgtccctgga aatcaagctg
      721 catgtgatcg cgcccgcctt gttcccacgg gtcctatagc atgtccggcg aacgctgcgc
      781 ccgaagccag gggcgaagtg tttccccagg aaaatgcgtg ccaagagacg gccgagggcg
      841 ttttccacgt tagtgaaatc ggctctaccc tatggctctg ggcacgccta ccagtttcac
      901 ggaaaatggt ttcgcgagaa catcatgcct tctcctcatg aggctcgatc tgcggtcgtc
      961 gtgacgggcg cttcgggcgg catcgggcgc gagatcgcca agctggccgc ccgcgagggc
     1021 ggccccgtgg tgctgatcgc gcgctctgcc gatgcgctcg ccgaagctgc cgaggacgtg
     1081 cgccgggccg gcggtgagcc gttcacgctt gtcctcgacc tgtcctcgcg cgaggcgccg
     1141 gcagaggtcg aaagcttcct ggccgcccag aacctcgtct gccgcgtcct cgtcaacaat
     1201 gccggctacg gcctgctcgg cgcggcggcc gcccttcctc gcggggatca gctgggcatc
     1261 gtcgacctga acatccgcgc cctcaccgac ctcaccttgc gcttcctgcc cggcatggtg
     1321 gcgcgccaca gcggcggcat catcaatctg gcgtccgtgg ccagcttcct gcccggcccc
     1381 tacatggcgc tttattacgc cagcaaggcc ttcgtgcgtt cgttctccga ggccctgtcg
     1441 gaggagctgc gcggcaccgg cgtcacggtg acctgcgtgg cgccgggccc cgtcgcgacc
     1501 caattcctcg cccgcgccgg cgcccggaag gtgcgcctgt tcaaggcgtt tcccaaggtg
     1561 acggccgagg cggtcgcgcg cagcgcctgg catggcttca agcgcggccg ccggctggtg
     1621 gtgccaaccg tgatggcgaa tctgagcgcc tttgccgggg cgcatctgcc gcacgccttt
     1681 ctcctgccgt tcacggcgcg catgcagcgg ccgcgcaaca agtgatgcgt gtcagcgcgc
     1741 cagcgccgca cgcaccagcc tgagggcgtc ctcgctggcc cattcggccg ggccgttgat
     1801 cagggcgagc tcgcagccat cggggtcgat cagcagggtg gtcggcatgc cgaccgcctt
     1861 gccgatgcgc ttgagatcct gaaacacctt ggcttccgga tcggcgtaat aggcaagccg
     1921 cccgacgccg gcctccttga gccatgtctt cggcttttcg aggttgcggg tgtcgatatt
     1981 gatcgcgacc acctcgaaag ccggcccgcc gagctcgccc tggagcttgt ccagcgcggg
     2041 catctcctgg cggcatgggg cgcaccaggt cgcccacagg ttgaggagga ctgtccggcc
     2101 ccggaacgcc gccaggccgg tcgggctgcc gtcgggtccg ttgaaggtga ggtccggcag
     2161 ccgcccgggc tccctggcga cggtggccgc cgccacctcg ccgcgggcca ggggcgcgag
     2221 ccgcccggtg gccgccttcg ccgccgggca ttggctggtg gcgctgttgc ccgcgcctcc
     2281 ggtcccgtat agggcgaagg cgccaaggcc aagcacggca gctgctagtc ccgcaagaag
     2341 cgggcgggtg gtcttcaggc gcatgggttc aacggacggc acaggccatg agcaaccgga
     2401 tgtggggtgg gcgcttcgcg agcggccccg gcgagatcat ggaagacatc aacgcttcca
     2461 tcgatttcga caagcgtctc gcgccgcagg acatccgcgg ctcactggcg cacgcggcga
     2521 tgctgggccg cgccgggatc ctgccggcgg aggatgtggc ggcgatcgag acgggactca
     2581 agacgatcct cggcgagatc gaaagcggcg ccttcacctt ctcccgcgct ctcgaagaca
     2641 tccacatgaa tgtggaagcg cgcctggccg atctgatcgg ccccaccgcc ggccgcctgc
     2701 acaccgcgcg ctcgcgcaac gaccaggtcg cgaccgacat gaagctatgg gtgcgcgaca
     2761 cgatcgatgc gctcgatgcc cagctcggcg acttgcaggc cgccctggcc gagaaggcgc
     2821 acgcattcgc gggcgccgtc atgccgggct tcacgcatct gcagtcggcg cagccggtca
     2881 cgttcggcca tcacctgctt gcctatgtcg agatgttttc ccgcgaccgc gggcgtttcg
     2941 ccgacgcgcg gcggcggctc aatgaatcac cgctcggtgc ggcggcgctg gccggcacgt
     3001 cgttcccgat cgaccgcttc atgaccgccg aggcgctcgg cttcgaccgt ccgacggcca
     3061 actcgctcga ttccgtgtcg gatcgcgatt tcgtcctcga gacggtcgcg gcggcggcga
     3121 tctgcgccgt gcatctgtcg cgcttcgccg aggagatcgt gctctggaca tcggtgcagt
     3181 tcggcttcgt gcgcctctcc gacgcgttca ccacgggctc gtcgatcatg ccgcagaagc
     3241 gcaacccgga tgcggccgag ctggtgcgcg gcaaggccgg ccgcatcatc ggcgcgctcg
     3301 gcgcgctgct cgtcgtcctc aagggcctgc cgctcgccta ttccaaggac atgcaggagg
     3361 acaaggaggg caccttcgac gcgctccact ccgtgtcgct gtgcatcgcg gcgaccgccg
     3421 gcctcgtgcg tgacatggag ccggacgtga aggcgatgaa gcgctgggcc ggag
//
LOCUS       DATAIQ010000537         1957 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_443096, whole genome shotgun sequence.
ACCESSION   DATAIQ010000537 DATAIQ010000000
VERSION     DATAIQ010000537.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1957)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1957)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1957
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_443096"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            97..729
                     /locus_tag="VHN20_08915"
     CDS             97..729
                     /locus_tag="VHN20_08915"
                     /inference="COORDINATES: protein motif:HMM:NF013696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEX2725924.1"
                     /translation="MEPARDGGKIVTSRKGVGRFDVHVEGRPAHAGSRHQDGRSAIRE
                     AARQILRIENMTDYGRGVTTTVGLVSGGTAVNVIPQHCRFSVDLRVATVADGEGYSAA
                     LLNLAPHDPDVRISVTGGMNRPPYERTDGVAQLYEHARGLAAELGFELQDVPRVGGGS
                     DGNFTAAIGIPTLDGLGIDGDGAHTLHEYGLVSSIVPRMRLMARLMETLS"
     gene            753..1253
                     /locus_tag="VHN20_08920"
     CDS             753..1253
                     /locus_tag="VHN20_08920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725925.1"
                     /translation="MRRALLPALLPIVSLLAAPTLAAAAGAKATLDTLPKRVQDQLWE
                     LAGECNRAGGRPGDPTQAVEAADLDGDGTPDLILDEARFPCRGVKPGAVCSEVGCSTY
                     LILSHGGRWRPALDFVGSYCLDRSVSPARFLTVQQNFATSGLYTLNVRYRFRNGLAFQ
                     EGRGTC"
     gene            1505..>1957
                     /locus_tag="VHN20_08925"
     CDS             1505..>1957
                     /locus_tag="VHN20_08925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015667115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit A"
                     /protein_id="HEX2725926.1"
                     /translation="MADPKDPRSGGPENPPPASDIKPISIVDEMKRSYLDYAMSVIVS
                     RALPDARDGLKPVHRRILYSMYENGYTPDKKYVKSARIVGDVMGQYHPHGDQAIYDAL
                     VRMAQDFSMRLPLIDGQGNFGSVDGDPPAAMRYTECRLARPTMTLVEAI"
BASE COUNT          308 a          697 c          640 g          312 t
ORIGIN      
        1 ggtggtctac atgctgaccg gcgacgagga gatcggcagc ccgacgacgc gcgagctgat
       61 cgaggatttg ggcggcgctc ggggtatgtg ctggtgatgg agccggcccg cgacggcggc
      121 aagatcgtca cctcgcgcaa gggcgtcgga cgcttcgacg tgcatgtcga gggccggccg
      181 gcgcatgccg ggtcgcgcca ccaggacggg cgcagcgcca tccgcgaagc cgcccgccag
      241 atcctgcgca tcgagaacat gaccgattac ggccgcggcg tgaccacgac cgtcgggctg
      301 gtctcgggcg gcaccgccgt gaacgtgatc ccgcagcact gccgtttctc cgtagatctg
      361 cgcgtcgcga ccgttgccga cggcgagggc tattcggccg cgctcctgaa cctcgcgccg
      421 cacgatcccg atgtgcgcat cagcgtgacc ggcggcatga accgcccgcc ttacgagcgc
      481 accgacgggg tcgcgcagct ctacgagcat gcccgcgggc ttgccgccga gctcggcttc
      541 gagctgcagg acgtgccgcg ggtcggcggc gggtccgacg gcaatttcac cgccgccatc
      601 ggcatcccga ccctcgacgg gctcggcatc gacggtgacg gcgcccacac cctgcacgaa
      661 tacggcctcg tctcgtcgat cgtgccgcgc atgcgcctga tggcgcggct catggagacg
      721 ctctcttaag gacttgggcg caagctttac gcatgcgccg cgcgctcctg cccgccctgt
      781 tgccgatcgt gtcgctcctg gccgcgccca ctctggctgc cgcggccggc gcaaaggcga
      841 ccctggacac gctgccgaag cgcgtccagg accagctctg ggaactcgcg ggcgagtgca
      901 accgcgccgg cgggcgtccc ggcgatccca cgcaggcggt cgaggcggcc gacctcgacg
      961 gcgacggcac gccggatctg atcctcgacg aggcgcgctt cccctgtcgc ggggtgaagc
     1021 cgggcgcggt ctgttccgag gtcgggtgct ccacctatct gatcctgtcg catggcgggc
     1081 gctggcgacc ggcgctcgac ttcgtcggca gctattgcct cgaccgcagc gtcagcccgg
     1141 cgcgcttcct gacggtgcag cagaacttcg cgacgagcgg attgtatacg ctcaacgtgc
     1201 gctatcgttt ccgcaacggc ctggccttcc aggagggccg cggcacctgc tgaggccgcg
     1261 ggcgtcgcgt cgagggcggc cccttcagcc ggcgcgatcc cgtccctcac cgcatgcgac
     1321 gatgcgaccg tcccgccctt gtggaagggc gcgcgcatca ccatatgaat tgacgaccca
     1381 aaccgttctg aacactcgga tttttccatc tctacgggcg gtcgccgcaa tcccggagcg
     1441 ggtggccttt cggtcctgaa tcggctaagc ggacggcacc tctttaaatc cggaataaga
     1501 caccttggcc gaccccaaag atccacgctc cggcggcccc gaaaacccgc cgccggccag
     1561 cgacatcaag cccatttcca tcgtcgacga gatgaagcgc tcgtatctcg actacgccat
     1621 gagcgtgatc gtgagccgcg ccctccctga cgcccgcgac ggcctcaagc ccgtccatcg
     1681 gcgcatcctc tattccatgt atgagaacgg ctacacgccg gacaagaaat acgtgaaatc
     1741 ggcgcgcatc gtcggcgacg tgatgggtca gtaccacccg cacggcgacc aggcgattta
     1801 cgacgcgctg gtgcgcatgg cgcaggattt ctccatgcgc ctgccgctca tcgacgggca
     1861 ggggaatttc ggatccgttg acggcgatcc cccggcggcc atgcgctaca cggagtgccg
     1921 cctcgcgcgc ccgaccatga ccctggtcga ggctatc
//
LOCUS       DATAIQ010000538         2500 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_27644, whole genome shotgun sequence.
ACCESSION   DATAIQ010000538 DATAIQ010000000
VERSION     DATAIQ010000538.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2500)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2500)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2500
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_27644"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2494
                     /gene="alaS"
                     /locus_tag="VHN20_08930"
     CDS             <1..2494
                     /gene="alaS"
                     /locus_tag="VHN20_08930"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017485869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004813 - alanine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006419 - alanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HEX2725927.1"
                     /translation="PYTRAATSQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGD
                     YFKADAIELAWTLITREFGLPKDKLLVTVFHTDEEAAELWRKIAGLPEHKIIRIPTSD
                     NFWQMGDTGPCGPCSEIFIDQGEALQGGPPGSPDEDGDRFLEFWNLVFMQYEQIEPGN
                     RVPLPKPSIDTGMGLERIAAVLQGVHSNYDIDLFRTLIDAVVTVTGAAYEGDRKASHR
                     VIADHLRASAFLVADGVLPSNEGRGYVLRRIMRRAMRHAELLGAREPVMYRLVPALVR
                     EMGQPYPELVRAEPLITETLKLEESRFRKTLERGLSILDQESRDLSAGQKLSGDVAFT
                     LYDTYGFPLDLTQDALKSRGVAVDTDAFNAAMERQREKARAAWSGSGEAATEAIWFGL
                     RERVGASEFLGYDTESAEGVVLALLNDGQETPALRAGESGLLVLNQTPFYGESGGQIG
                     DTGAIGAPGLRVRVTETHKKLGDLIVHHVTVESGTLEVGQSVELAVDHERRAAIRANH
                     SATHLLHEALRQVLGDHVAQKGSLVAPDRLRFDFSHPKPIDDAELEAVEDMANRVLLQ
                     NEPVVTKLMAVDEAIESGARALFGEKYGDEVRVVSMGRPNGGAQANKAFSVELCGGTH
                     VQRTGDIGLITVVSEGAVAAGVRRLEAMTGEAARRHLREESRRLHDIAGLLKTPAEEA
                     PERLSALVEDRRRLERELTDARRKLAMGGGGSGGEPVREIGGVKVMTRAVSGVEMRDL
                     KSLADEGKKRLGSGVVAIVGVAEDGKAGIVVGITEDLTQRFDAVSLVRAGAEKLGGKG
                     GGGRRDMAQAGGPDGSQAEAALAAVEAALAAA"
BASE COUNT          421 a          848 c          872 g          359 t
ORIGIN      
        1 cccttacacg cgcgccgcca cctcgcagaa atgcgtgcgc gccggtggca agcacaacga
       61 tctcgacaat gtcggctata ccgcccggca ccacacgttc ttcgagatgc tcggcaattt
      121 ctcgttcggc gattacttca aggcggacgc catcgagctc gcctggaccc tgatcaccag
      181 ggagttcggg ctgcccaagg acaagctcct cgtcacggtg ttccacaccg acgaggaggc
      241 ggccgagttg tggaggaaga tcgcgggcct gccggagcac aagatcatcc ggatccccac
      301 ctccgacaat ttctggcaga tgggcgacac ggggccctgc ggcccgtgct cggagatctt
      361 catcgatcag ggcgaggcgc tgcaaggcgg gccgccggga agccccgacg aggatggcga
      421 ccggttcctg gaattctgga atctcgtgtt catgcaatac gagcagatcg agccgggcaa
      481 tcgcgtgccg ctgccgaaac cgtcgatcga cacgggcatg gggctcgagc gcatcgcggc
      541 ggtgctgcag ggcgtccaca gcaattacga catcgacctg ttccgcacgc tgatcgatgc
      601 cgtcgtcacg gtcaccggcg ctgcctacga gggcgatcgc aaagcctcgc atcgcgtgat
      661 cgccgatcac ctgcgcgcct ccgcattcct cgtcgccgac ggcgtgttgc cgtcgaacga
      721 aggccgcggc tacgtgctcc gccgcatcat gcgccgggcc atgcgccacg ccgagctgct
      781 cggcgcccgc gagccggtca tgtaccggct ggtgccagcg ctcgtgcgcg aaatgggaca
      841 gccgtatccc gagctcgtgc gtgcggagcc gctgatcacc gagacgctga agctcgagga
      901 aagccgcttc cgcaagacgc tcgagcgcgg cctttccatc ctggaccaag aaagccgtga
      961 cctctcggca gggcaaaagc tatcaggcga tgtcgcgttc acgctctacg acacctacgg
     1021 ctttccactc gacctcacgc aggacgcgct caagtcgcgc ggcgtcgccg tcgacaccga
     1081 tgccttcaat gccgccatgg agcgccagcg cgagaaggcg cgcgccgcct ggtcgggctc
     1141 cggcgaggcc gccacggagg ccatctggtt cggcctgcgc gaacgggtcg gggcgagcga
     1201 gttcctcggc tacgataccg aatcggccga gggcgtcgtg ctggcgctgc tcaacgacgg
     1261 acaggaaacg cccgcgctgc gagccggcga gagcggcctc ctcgtcctca accagacgcc
     1321 gttctacggt gagtcgggcg ggcagatcgg cgacacgggc gcgatcggcg cgccgggcct
     1381 gcgcgtgcgc gtgaccgaga cccacaagaa gctgggtgac ctgatcgtgc atcacgtcac
     1441 cgtggagtcc ggcacgctcg aggtcggcca gtcggtcgag ctcgcggtcg atcacgagcg
     1501 ccgcgccgcc atccgcgcca accattccgc gacgcatctc ctccatgagg cgctgcgcca
     1561 ggtgctgggc gaccacgtcg cgcagaaggg ctcgctcgtg gcgcccgacc gcctgcgctt
     1621 cgacttcagc catccgaagc cgatcgacga cgccgaactc gaagccgtcg aagacatggc
     1681 caaccgcgtc ctgctgcaga acgagccggt ggtcaccaag ctcatggcgg tcgacgaggc
     1741 gatcgaatcg ggtgcacggg cgctgttcgg cgagaaatac ggcgacgagg tgcgcgtcgt
     1801 gtcgatggga cgtccgaacg gcggcgcgca ggcgaacaag gcgttttcgg tcgagctgtg
     1861 cggcggcacg cacgtgcagc gcaccggcga tatcgggctg atcaccgtcg tctcggaagg
     1921 cgcggtcgct gccggcgtcc gtcgtctcga ggcgatgacc ggcgaggctg cccgccgtca
     1981 cctccgcgag gaaagccgcc gcctgcacga catcgccggt ttgctcaaga cgccggccga
     2041 ggaggcgccc gagcgccttt cggccctggt cgaggatcgc cggcggctcg agcgcgagct
     2101 taccgatgca cggcgcaagc tcgccatggg cgggggcggc tcgggcggcg agccggtgcg
     2161 cgagatcggc ggcgtcaagg tgatgacgcg cgccgtgtcc ggcgtcgaaa tgcgcgatct
     2221 caagagcctg gcggatgaag gcaagaagcg gctcggctcc ggcgtcgtcg ccatcgtcgg
     2281 cgttgccgag gatggcaagg ccggcatcgt cgtcggcatc accgaagacc tgacgcagcg
     2341 cttcgacgcc gtcagcctgg tgcgcgccgg cgcggagaag ctcggcggca agggcggcgg
     2401 cggacggcgc gacatggccc aggccggcgg tcccgacggc agccaggcgg aagcggcgct
     2461 ggcggccgtg gaagcggcgc tcgcggccgc atgaccgaag
//
LOCUS       DATAIQ010000539         4535 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_120834, whole genome shotgun sequence.
ACCESSION   DATAIQ010000539 DATAIQ010000000
VERSION     DATAIQ010000539.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4535)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4535)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4535
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_120834"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(363..797)
                     /locus_tag="VHN20_08935"
     CDS             complement(363..797)
                     /locus_tag="VHN20_08935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HEX2725928.1"
                     /translation="MIDNRLAPYGALALRVALGAMFIAHAYLKLAVFTVPGFEGFLGK
                     IGLPTVVAWPIILAELVGGLAILAGFYGRLVSAALLPVLIGALVVHAPNGWVFNAPNG
                     GWEYPAFLAAAALAHALIGDGAFALKTVQVPALASRREPQAA"
     gene            976..1908
                     /locus_tag="VHN20_08940"
     CDS             976..1908
                     /locus_tag="VHN20_08940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002713015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ring-cleaving dioxygenase"
                     /protein_id="HEX2725929.1"
                     /translation="MSGYHGIHHVTAISGPARRNLDFYTRTLGLRLVKKTVNFDDPGT
                     YHFYYGDAAGRPGTILTFFPWEHAAPGRVGIGETQETALRVPEGAIGYWAQRFIEKGV
                     AHETPQKRFGETVLPFTDPDGMRLAFVAVPGIADAPAWSDGTVPAEHAVRGFHGVTLL
                     LDEAAPTGAILTDVLGFAENGRDGATVRFKADGEVGGTVDIRAAGDFLRGRQGAGSVH
                     HIAFRAADDAAQSAMMQRLADHHGIRTTEQRDRNYFRSIYFREPGGVLFEIATDGPGF
                     AVDEPGDTLGQALKLPRFLEPRRDQIEAVLPEVA"
     gene            1991..2611
                     /locus_tag="VHN20_08945"
     CDS             1991..2611
                     /locus_tag="VHN20_08945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007608481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX2725930.1"
                     /translation="MNATTELSHLHRFEPASQAGRPPLLLLHGTGGDENDLIGLGRMV
                     APGAALLAPRGKVLEGGMPRFFRRLAEGVFDEADVVRRAGELADFIAEARDAYGLPAP
                     VAVGFSNGANIAAAVLLRRPEALAGAALLRAMVPLKDPPPADLAGKPVLLLSGAVDPI
                     VPAENSARLAALLEGAGATVQARTLPGGHGLSQADVALTKAWIDQL"
     gene            2635..3579
                     /locus_tag="VHN20_08950"
     CDS             2635..3579
                     /locus_tag="VHN20_08950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ring-cleaving dioxygenase"
                     /protein_id="HEX2725931.1"
                     /translation="MQLSGIHHLTAVTAHARGNHDFYTRMLGLRLVKKTVNQDDTSAY
                     HLFYADGLASPGSDITFFDWPVTPEKRGTHSISRTAFRVAGADALSWWQRRFDEGGVT
                     HGDVALRDGRLTLDFEDAEGQRLSLVDDGGAGEAHPWERSPVPAPQQIRGLGPITISV
                     PDLARTDVVLTHVMNMRRERDYPTPGNGGSQTHVYAMGEGGPAAELHVGVEPDLPVVE
                     PGAGGVHHVAFRTPDADYEAWADRLRQLRIPSSGPVDRYYFRSLYFREPNGILFEIAS
                     DGPGFAADEPLEHLGEKLALPPFLEPKRRQIEAGLKPL"
     gene            complement(3733..3918)
                     /locus_tag="VHN20_08955"
     CDS             complement(3733..3918)
                     /locus_tag="VHN20_08955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725932.1"
                     /translation="MKKASEYRKHAEECRALARQMKQGEYREQLLVMADTWDRLAEER
                     EASFPGEAKAAVKEQPE"
     gene            4296..4532
                     /locus_tag="VHN20_08960"
     CDS             4296..4532
                     /locus_tag="VHN20_08960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725933.1"
                     /translation="MPRYYFDVCEGDHFVPDDVGLVLPNLETARDQATRALAEIARDT
                     LPGTVQREIAIEVKDHARAPLLRAGLSFELRKLA"
BASE COUNT          712 a         1571 c         1533 g          719 t
ORIGIN      
        1 cgcgcaacat ggccatcgtc acggccacgt cgccgatcag cagcatcagc accgccgcgg
       61 cggcgatcgg aaacgggtag gtttccgcat ggaacgcctg tgcttcggtc tggctgcgag
      121 cccgcttggc gagatgtgac atcggtcttc cctcaggttc ggcttgagga tgacaatgcc
      181 atgggctggt gtcggcgaat gtgtccgggc gcacatgcgg actcgttcat cttccccgca
      241 aaccccgccc gacctcatgc gacggacgcg cgccggcaaa tctcgggttc gatgaaatcg
      301 gccttggcaa gtcgggaaca cccggcttgc caaggagacg acatttggac cgcggctgcg
      361 gcctacgccg cctggggctc gcgccgggac gcgagagccg gcacctggac ggttttgagc
      421 gcgaaggcgc cgtcgccgat cagcgcatgc gcgagcgccg ccgcggcgag gaaggccgga
      481 tattcccagc cgccgttcgg cgcgttgaac acccagccgt tcggggcgtg cacgacgagg
      541 gcgccgataa gcacgggcag cagcgccgcc gagacgaggc ggccgtagaa gccggccagg
      601 atggcgaggc cgccgacgag ctctgccagg atgatcggcc aggcgacgac ggtcgggaga
      661 ccgatcttgc cgaggaagcc ctcgaagccc ggcaccgtga acacggcgag cttcagatag
      721 gcgtgggcga tgaacatcgc gccgagggcg acgcgaaggg cgagggcgcc gtaaggggcg
      781 aggcgattgt cgatcatcga agtcatctcc gggaccggga gcggtccgtt gccgtcggag
      841 atgaaccttt cctagttgca aaggcaacgc ccaaatgtgc agacactgca ttgcacctgt
      901 gcaaagaaat cctcgtggtt taaggctgcc tcggccttat ttgagaggca cgccatcggg
      961 cggcaggagg acaccatgtc gggctatcac ggcattcacc acgtcacggc gatatcgggt
     1021 ccggcgcgcc gcaatctcga tttctacacg cgcacgctcg ggctgcgtct cgtcaagaag
     1081 accgtcaact tcgacgatcc gggcacctac cacttctatt acggcgacgc ggccgggcgg
     1141 ccgggcacga tcctcacgtt ctttccgtgg gagcacgccg cgccgggccg ggtcggcatc
     1201 ggcgagaccc aggaaacggc gttgcgcgtg ccggaaggcg cgatcggcta ctgggcccag
     1261 cgtttcatcg agaagggcgt ggcgcacgag acgccgcaaa agcgtttcgg cgagaccgtg
     1321 ctgccgttca cggatccgga cggcatgcgg ctggccttcg tcgcggtgcc ggggatcgcc
     1381 gacgcgccgg cctggagcga cggcacggtc ccggccgagc atgccgtgcg cggctttcac
     1441 ggcgtgaccc tgctgctcga cgaggccgcg ccgacgggcg cgatcctcac ggacgtgctc
     1501 ggcttcgccg agaacggccg ggacggtgcg accgtgcgct tcaaggcgga cggagaggtc
     1561 ggcggaaccg tcgacattcg tgctgccggg gatttcctgc gcggacgtca gggcgccggg
     1621 tcggtccatc acatcgcctt ccgggctgcc gacgacgcgg cccagtcggc gatgatgcaa
     1681 aggctcgcgg accatcatgg catccgcacg accgagcaga gggaccgcaa ctacttccgc
     1741 tcgatctact tccgcgagcc cggcggcgtg ctgttcgaga tcgccaccga tggtcccggc
     1801 ttcgcggtcg acgagccggg cgataccctt gggcaggcct tgaagctgcc gcgcttcctc
     1861 gagccgcgcc gcgaccagat cgaggcggtt ctgcctgagg tcgcctgatc gatccgttct
     1921 tcgtccccgg ggagagcccg gggacggagg ccttcctggc cggcacacct gaagacccag
     1981 agagagtccc atgaacgcca ccaccgaact gtcgcacctg caccgtttcg agccggcgag
     2041 ccaggccggc cggccgccgc ttctgctgct gcacggcacc ggcggcgacg agaacgacct
     2101 gatcgggctc ggccgcatgg tcgcgcccgg cgcggcgctg ctggcgccgc gcggcaaggt
     2161 gctggagggc ggcatgccgc gtttcttccg gcgcctggcc gaaggcgtgt tcgacgaagc
     2221 cgacgtggtg cgccgcgccg gtgagctcgc cgatttcatc gccgaggcgc gcgatgccta
     2281 cggcctgccg gccccggtcg cggtcgggtt ctcgaacggc gccaacatcg ccgcggcggt
     2341 gctgctgcgg cggcccgagg cgctcgccgg cgccgcgctg ctgcgcgcca tggtgccgct
     2401 caaggacccg cccccggccg acctcgccgg caagccggtg ctgctgctgt cgggcgccgt
     2461 cgatccgatc gtgccagcgg agaattccgc gcgcctcgcg gcgctgctcg agggcgccgg
     2521 ggcgacggtg caggcccgca cgctgcccgg cggccacggc ctgtcccagg ccgacgtcgc
     2581 cctcaccaaa gcctggatcg atcagctttg atccgtcgtg aaaggaccta acccatgcaa
     2641 ctcagcggca tccaccacct gaccgccgtg accgcccatg cgcgcggcaa ccacgacttt
     2701 tacacgcgca tgctcgggct gcgcctcgtc aagaagacgg tgaaccagga cgacacctcg
     2761 gcctaccacc tgttctacgc cgacgggctc gcctcgccgg gctccgacat caccttcttc
     2821 gactggccgg tgacgcctga gaagcgcggc acccacagca tctcgcgcac cgctttccgg
     2881 gtggccggcg ccgacgcgct gtcctggtgg cagcgacgct tcgacgaggg tggcgtgacg
     2941 cacggcgatg tcgccctgcg cgatggccgt ctcaccctcg atttcgagga tgccgaaggc
     3001 cagcgcctca gcctcgtcga cgacggcggc gccggcgagg cgcatccctg ggagcgcagt
     3061 ccggtgccgg cgccgcaaca gatccgcggc cttgggccga tcaccatcag cgtccccgat
     3121 cttgcgcgga cggacgtggt cctgacgcac gtgatgaaca tgcgccgcga gcgcgattac
     3181 ccgacccccg gcaacggtgg ctcgcagacc catgtctacg cgatggggga gggcggcccc
     3241 gccgcggaac tgcacgtcgg ggtcgagccc gacctgccgg tcgtcgagcc gggcgccggc
     3301 ggcgtgcatc acgtcgcctt ccgcaccccg gatgccgact acgaggcctg ggcggaccgc
     3361 ttgcgccagc tgcgcatccc gtcgagcggt cccgtcgacc gctactattt ccgcagcctt
     3421 tatttccgtg agcccaacgg catcctgttc gagatcgcca gcgacgggcc cggctttgcc
     3481 gccgacgagc cgctcgagca cctcggcgag aagctcgccc tgccgccgtt cctcgagccg
     3541 aagcgccggc agatcgaggc cggcctcaag ccgctgtgat tgagactggc gcatgatccg
     3601 gcgaaagcct gccccggact cgatccgggg tggataccgc ctcgccgaac aggcttgtcg
     3661 cggacgggat ccgggatcat gcggttcaat gagaaagagc gcgggatcgg ctcaatctga
     3721 attgatcctg ctctattcgg gctgctcctt gaccgccgcc ttggcctccc cagggaacga
     3781 agcctcgcgc tcctcggcga gccggtccca ggtgtcggcc atgacgagaa gctgctcgcg
     3841 atattcgccc tgcttcatct gccgggcgag ggcgcggcac tcctcggcgt gctttcggta
     3901 ttccgacgcc ttcttcaccc gaatcccctt gtgccccagc atccttgacc gatatgccca
     3961 cattaacacg ggatatgccg caagcatgtc ttggcgaaag cctgcccggg cttgatccgg
     4021 ggatcatgcg ccgcgacgac gatcacacgt gatcgacatg ttcggacttg gtcacgcccg
     4081 agcacccgcc gcggcgccgc ttgcgcggca cgagccccgt gttaagctga aggcgtggtc
     4141 taggatgaac tcgccccgcc cggccaatcc ggcggggcgt tttgttgcag gggagcatgt
     4201 cgtctcgtgc ctgcgccaag gggctccaaa cggttttagc cgaggccttc acctcgttga
     4261 ttgacggcta cttcgattgg tgcgtaagcg gggagatgcc ccgctactat ttcgacgtgt
     4321 gcgaagggga ccatttcgtc cccgacgacg tcgggcttgt tctgcccaac ctcgagacgg
     4381 cgcgcgatca ggccacccgc gccctcgccg agatcgcgcg ggacaccttg cctggcaccg
     4441 tccagcgcga gatcgccatt gaggtgaagg accacgcgcg ggcgcctttg ctgcgcgccg
     4501 ggctgtcctt cgagttgcgc aagctcgcct gagcc
//
LOCUS       DATAIQ010000540         1837 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_397285, whole genome shotgun sequence.
ACCESSION   DATAIQ010000540 DATAIQ010000000
VERSION     DATAIQ010000540.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1837)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1837)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1837
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_397285"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..318)
                     /locus_tag="VHN20_08965"
     CDS             complement(<1..318)
                     /locus_tag="VHN20_08965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009494038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX2725934.1"
                     /translation="MSDTAEPMVHEDALPGHESELEPKPDWQPRYPGSGRLKGKTAIV
                     TGADSGIGRAVAVLYAREGANVAILYLCEHDDAELTRKACEEEGARAITIAGDLGIKD
                     FCDE"
     gene            complement(360..1649)
                     /locus_tag="VHN20_08970"
     CDS             complement(360..1649)
                     /locus_tag="VHN20_08970"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HEX2725935.1"
                     /translation="MERPFKIGVAAFGLVAAGLALAGHQPRPAARAEQQANLVRLASI
                     STADRRSIDYRALDERLRRLVEKPSMVGLAVGVVENGRITFLGGYGETLAGSGETVTP
                     ATVFRWASVSKGVAGTMAAKLEQAGKLSMSQPIVKYAPSLKLPGGNEARATLGDVLSH
                     RLGLYRNAYDDKLEAGENPATIRRMLASLASLCAPGTCWSYQNVAFDAASEAVVGATN
                     RTYEEAVKGTLFRPLGMTSASVSREGLERAQSWARPHSAGGRPLEMSDAYYRVPAAGG
                     VNSNIKDMALWMIAQMGGMPEVLGPKLLDEIHAPLVATPNELRRLRKFRERLAEPHYG
                     YGWRSYLYGGHRIVGHRGGVNGYRSLILFDPALKSGVVALWNSNTSQPGGLEFEVMDM
                     LYGLPFRDWMELDTAAPGAPPVAAAEEPASSGGDARN"
BASE COUNT          274 a          688 c          581 g          294 t
ORIGIN      
        1 ttcgtcgcag aagtccttga tgccaaggtc gccggcgatg gtgatcgccc gcgcgccctc
       61 ctcctcgcac gccttgcgcg tcagttcggc gtcgtcgtgc tcgcacagat agaggatcgc
      121 gacgttggcg ccctcgcgcg cgtaaagcac ggcgaccgcg cggccgatgc cgctgtccgc
      181 gccggtgacg atcgccgtct tgcccttgag ccggccggag ccgggatagc gcggctgcca
      241 gtccggcttg ggctcgagtt cgctttcatg cccgggaagc gcgtcctcat ggaccatggg
      301 ttcggcggta tcggacatcg ggcaatctcc tcacccgcgc caacgcttgc ctgcagcgcc
      361 tagttgcgcg cgtcgccgcc gctgcttgca ggctcttcgg cggcggcaac cggcggtgcg
      421 ccgggcgcgg cggtgtcgag ctccatccag tcgcggaacg gcaggccgta gagcatgtcc
      481 atcacctcga actccagacc gcccggctgg gaggtattgc tgttccacag cgccaccacg
      541 ccgctcttca gcgccggatc gaacaggatc agcgagcgat agccgttgac cccgccgcgg
      601 tgcccgacga tgcggtgccc gccatagaga tagcttcgcc aaccatagcc gtaatgcggc
      661 tccgccagcc gctcgcggaa cttgcgcagc cggcgcagct cgttcggcgt ggcgacaagc
      721 ggcgcgtgga tctcgtcgag cagcttcggg ccgagcacct ccggcatgcc gcccatctgg
      781 gcgatcatcc acagcgccat gtccttgatg ttgctgttga ccccgcccgc cgccggcacg
      841 cggtaataag cgtcgctcat ctccagcgga cgcccgccgg cgctgtgcgg ccgggcccag
      901 ctctgcgcgc gctcgaggcc ttcccggctg accgaggcgg aggtcattcc gagcggccgg
      961 aacaaagtgc ccttgaccgc ctcctcatac gttcggttgg tcgcccccac gaccgcctcg
     1021 ctcgccgcgt cgaacgccac gttctgatag ctccagcacg tccccggcgc gcacaaggag
     1081 gcgagcgacg caagcatccg ccggatcgtc gccgggttct ccccggcttc cagcttgtcg
     1141 tcataggcgt tgcgataaag cccgagccga tggctcagca cgtcgccgag cgtcgccctc
     1201 gcctcgttcc cgcccggtag cttgaggctc ggcgcatatt tgacgatcgg ctgggacatc
     1261 gaaagcttgc ccgcttgctc gagcttggcc gccatcgttc cggccacgcc cttcgacacc
     1321 gaggcccagc ggaacaccgt cgcgggcgtg accgtctcgc ccgaccccgc cagcgtctcg
     1381 ccatagccgc cgaggaaggt gatccgcccg ttctcgacga cgcccacggc aaggccaacc
     1441 atcgacggct tttccaccag ccggcgaagc cgctcgtcga gcgcgcggta atcgatcgag
     1501 cggcggtcgg cggtcgaaat cgaagccagc cggacgaggt tggcctgctg ctccgcccgt
     1561 gccgccggac gcggctggtg gcccgccagc gcgaggccgg ccgctaccag gccgaacgcg
     1621 gccaccccaa tcttgaacgg ccgttccacg ccttaccatc ctcccgcccg ccaacggcct
     1681 ccaccaaccg ccgtcgacac tcaagcacct tagcgcgcgg tatcgacgga gcgagtcccg
     1741 gccacgacga accgcgccgc ctctggcgtt cgcgcacgct cgtccctaaa gcgtcgcgtc
     1801 gaggagggcg agtgggatgc aattcctcaa gaccttg
//
LOCUS       DATAIQ010000541         1510 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_335440, whole genome shotgun sequence.
ACCESSION   DATAIQ010000541 DATAIQ010000000
VERSION     DATAIQ010000541.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1510)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1510)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1510
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_335440"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..306
                     /locus_tag="VHN20_08975"
     CDS             <1..306
                     /locus_tag="VHN20_08975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000753228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrbG/VirB9 family P-type conjugative transfer
                     protein"
                     /protein_id="HEX2725936.1"
                     /translation="EYLGDLSFDYELSGSASWKPVRVYNDGRKTIIEMPGTMQQTEAP
                     TLLVVRKEGGLFTDDETVLVNYRVQGNRYIVDTVFDRAILIAGVGSSQDRVTISRRK"
     gene            309..797
                     /locus_tag="VHN20_08980"
     CDS             309..797
                     /locus_tag="VHN20_08980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011798704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TrbH"
                     /protein_id="HEX2725937.1"
                     /translation="MRKIVSLALLALALGLGGCATTSQYGNFVQSAALDQQKLATDAV
                     QQLATLYAPARTRLELQQPTPDPFGQALVKSLRDKGYALLEYAPAGASTQAPASAASQ
                     ASAPATTAASGGLPLRYVLDQAGDSNLYRLTLMVGNQSITRPYLAQNGTFAPAGYWVR
                     KE"
     gene            892..>1510
                     /locus_tag="VHN20_08985"
     CDS             892..>1510
                     /locus_tag="VHN20_08985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011114050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TrbI"
                     /protein_id="HEX2725938.1"
                     /translation="MYILGGVLLSFVLVMALVAADRAAKQNAPADGPKEKAGNTSMFA
                     KEIAGDKTGGLIEPASPLKVPDMPTGPASAPLEIARPSNPDAPPAPPANPGNPGQPVN
                     DDEAQRIRMAKMQMFGEAVKAKTTVRVDAPRSNGSAPGGPSTYTGTPQTRDEMLNRIA
                     AVQQQIDAQRSNDPTAAYQARLAQIRGMGVGGGGAAPAAGGMGAGG"
BASE COUNT          269 a          533 c          503 g          205 t
ORIGIN      
        1 gagtacctgg gcgatctctc gttcgactat gagctgtccg ggtcggcgag ctggaagcct
       61 gtgcgcgtct acaacgatgg ccgcaagacc atcatcgaaa tgcccggcac gatgcagcag
      121 accgaagcgc cgacgctcct ggtcgtgcgc aaagagggcg gcttgttcac cgacgacgaa
      181 acggtgctgg tcaattaccg cgtgcagggc aatcgctaca tcgtggacac ggtgtttgac
      241 cgcgcgatcc tgattgccgg tgttggcagt agccaagacc gcgtgaccat cagccggagg
      301 aagtgaccat gcgcaagatc gtctctctcg cgctgctcgc cctcgccctg ggcctcggcg
      361 gctgcgcaac caccagccag tacggcaact tcgtccagtc ggccgcgctc gatcagcaga
      421 agctcgccac cgacgcggtg cagcagctcg ccacgctgta cgcgccggcg cgcacgcgcc
      481 tggagctgca acagccgacg cccgatccgt tcggccaggc gctcgtcaag tcgctgcgcg
      541 acaagggcta tgccctcctg gagtacgccc cggccggcgc ttccacgcag gccccggcct
      601 cggcggcatc gcaggcgagc gcaccggcca ccacggccgc gtcgggcggc ctgccgttgc
      661 gctacgtgct cgaccaggct ggcgactcga acctgtaccg cctgaccttg atggtcggca
      721 atcaatccat cacccgccct tacctggcgc aaaacggcac gttcgcgccg gccgggtact
      781 gggtgcgcaa ggagtgacgc catgacagaa aacgccgatc agatggcacc tgacgcttcg
      841 cctggcgaag tgtccaagaa ggcgggcgtc cgtcgcgtca acaacatgcc catgtacatc
      901 ctcggcggcg tcctgctgtc gttcgtgctg gtcatggccc tggtcgcggc ggatcgcgcg
      961 gccaagcaga acgcgccggc ggacggcccc aaggagaagg ccggcaacac gtcgatgttc
     1021 gccaaggaga tcgcaggcga caagaccggc ggcttgatcg agccggcaag cccgctcaag
     1081 gtgcccgaca tgccgaccgg cccggcgtcg gctccgctgg agatcgcgcg gccgtccaac
     1141 ccggacgcgc cgccggcccc gccggccaac cccggcaacc cgggccagcc ggtgaacgac
     1201 gacgaggccc agcgcatccg catggcgaag atgcagatgt tcggcgaagc cgtgaaggcc
     1261 aagaccaccg tgcgcgtgga tgccccgcgt agcaacggct ccgcgccggg tggcccgagc
     1321 acctacaccg gcacgccgca gacgcgcgat gaaatgctga accgcatcgc agcggtgcag
     1381 cagcaaatcg acgcgcagcg cagcaacgat ccgaccgccg cctatcaagc acgcctggcg
     1441 cagattcgcg gcatgggcgt cggtggtggc ggcgcggctc cggccgccgg cggcatgggc
     1501 gcgggcggtg
//
LOCUS       DATAIQ010000542         3806 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_58884, whole genome shotgun sequence.
ACCESSION   DATAIQ010000542 DATAIQ010000000
VERSION     DATAIQ010000542.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3806)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3806)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3806
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_58884"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(115..540)
                     /gene="rplQ"
                     /locus_tag="VHN20_08990"
     CDS             complement(115..540)
                     /gene="rplQ"
                     /locus_tag="VHN20_08990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019403798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005762 - mitochondrial large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HEX2725939.1"
                     /translation="MRHGFRGRRFNRTPEHRKAMFANMSAALLKHEQIVTTLPKAKDL
                     RPVVEKLITLGKRSDLHARRLAMSQIRDAAIVKKLFEIIGPRYKARNGGYTRVLKAGF
                     RYGDNAPMAVIELVDRDVDARGMDSGPTQKEEVVESTAA"
     gene            complement(667..1686)
                     /locus_tag="VHN20_08995"
     CDS             complement(667..1686)
                     /locus_tag="VHN20_08995"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007557610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HEX2725940.1"
                     /translation="MVVQKNWQELIKPNKLDVAQGDDPRRVATVVAEPLERGFGTTLG
                     NALRRVLLSSLQGAAVTSVHIDGVLHEFSSIPGVREDVTDIILNIKTTAIRMQSEGSK
                     RMTLRKTGPGVVTAGDISTVGDVQILNPDLVLCTLDEGAEIRMEFTVNTGKGYVAAER
                     NRPEDAPIGLIPIDSLYSPVKKVSYRVENTREGQILDYDKLTMTVETNGAVSPEDALA
                     YAARIIQDQLAVFVNFEEPRKEEAAVAAPQLPFNPALLKKVDELELSVRSANCLKNDN
                     IVYIGDLIQKTEAEMLRTPNFGRKSLNEIKEVLAGMGLHLGMEVPGWPPENIEDLAKR
                     FEEHY"
     gene            complement(1778..2167)
                     /gene="rpsK"
                     /locus_tag="VHN20_09000"
     CDS             complement(1778..2167)
                     /gene="rpsK"
                     /locus_tag="VHN20_09000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007603045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HEX2725941.1"
                     /translation="MAKEATRVRRRERKNIVSGVAHVNASFNNTMITITDAHGNTISW
                     SSAGSMGFKGSRKSTPYAAQVAAEDAARKASEHGMRTLEVEVSGPGSGRESALRALQS
                     AGFTVTSIRDVTPIPHNGCRPRKRRRV"
     gene            complement(2341..2715)
                     /gene="rpsM"
                     /locus_tag="VHN20_09005"
     CDS             complement(2341..2715)
                     /gene="rpsM"
                     /locus_tag="VHN20_09005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011651425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HEX2725942.1"
                     /translation="MARIAGVNIPTNKRVVIALQYIHGIGATKAQEITEKVGIPAERR
                     VSQLTDAEILQIRETIDRDYMVEGDLRREVSMNIKRLMDLGSYRGLRHRRSLPVRGQR
                     THTNARTRKGKAKPIAGKKKST"
     gene            complement(3064..3645)
                     /locus_tag="VHN20_09010"
     CDS             complement(3064..3645)
                     /locus_tag="VHN20_09010"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017485519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0019205 - nucleobase-containing compound
                     kinase activity [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HEX2725943.1"
                     /translation="MRIILLGPPGAGKGTQAARIVERFGIPQLSTGDMLRAAVAAGTP
                     VGLRAKAIMDRGELVPDDVVVGIIADRIDESDARNGFILDGFPRTVAQAEAFDTLLAK
                     KGLKLDGVVELKVDEGALVDRIVKRAAETQARGEPVRKDDNPEVFKTRLTAYRAQTAP
                     LSAYYSSKGALKTVDGMKTIDEVSGDLFRVLGA"
BASE COUNT          566 a         1261 c         1266 g          713 t
ORIGIN      
        1 gcagttcctg ccgattctgg ggcgcgacgc gcgtctgggc ttcagcgccc gcgcagccga
       61 gggccgcagc gacgatcagc gccagcaacg gggcgcgcat gggacgcgcg cccgtcaggc
      121 ggccgtgctc tcgacgacct cttccttctg ggtcgggccc gaatccatgc cgcgggcatc
      181 gacgtcgcgg tcgacgagct cgatcacggc catcggcgcg ttgtcgccgt agcgaaagcc
      241 ggccttgaga acgcgggtgt agccgccgtt gcgcgccttg tagcgcggcc cgatgatctc
      301 gaagagcttt ttcacgatcg ccgcgtcgcg gatctgcgac atggcgagcc ggcgggcatg
      361 caggtcgctg cgcttgccga gcgtgatcag cttctcgacg accggacgca ggtccttggc
      421 cttgggaagc gtggtgacga tctgctcgtg cttgagcagg gcggccgaca tgttggcgaa
      481 catcgccttg cgatgctcgg gggtgcggtt gaagcggcgg cctctgaatc cgtggcgcat
      541 ggatctttct ccttcgttac ggccgccgtg ccaaggtacg gccgttgttt ttggcagtca
      601 gcagtgggca gtcggccgtc gtgatcaagt gacccgacgg cctactggcg actgcctatt
      661 gccggctcag tagtgttcct cgaaacgctt ggcgaggtct tcgatattct ccggcggcca
      721 gcccggcact tccatgccga gatgcaggcc catgccggcg agcacttcct tgatctcatt
      781 gagcgacttg cggccgaagt tcggggtgcg cagcatctcc gcctcggtct tctggatcag
      841 gtcgccgata tagacgatgt tgtcgttctt caggcagttg gccgaacgca ccgagagctc
      901 aagctcgtcg accttcttga gcagcgccgg gttaaagggc agctgcgggg cggcgacagc
      961 ggcctcttcc ttgcgcggct cctcgaagtt cacgaacacg gcgagctggt cctggatgat
     1021 gcgcgccgca taggcgagcg cgtcttccgg gctgacggcg ccgttcgtct cgaccgtcat
     1081 ggtgagcttg tcgtagtcga ggatctgacc ttcgcgggtg ttctcgacgc gatacgacac
     1141 cttcttgacc gggctgtaga ggctgtcgat cgggataagg ccgatcggcg cgtcctctgg
     1201 ccggttgcgc tcggccgcca cgtagccctt gccggtgttg accgtgaact ccatgcggat
     1261 ctcggcgccc tcgtcgagcg tgcacaggac aagatcggga ttgagtatct gcacgtcgcc
     1321 gacggtgctg atgtcacccg ccgtcacgac gcccgggccc gtcttgcgca gggtcatgcg
     1381 cttgctgccc tcgctctgca tgcggatggc ggtggtcttg atgttgagga tgatgtcggt
     1441 gacatcctcg cgcacgcccg ggatcgacga gaattcgtgc agcacgccgt cgatatggac
     1501 ggacgtcacc gccgcgccct gcagcgagga caagagcacg cgccgcagcg cgttgccgag
     1561 cgtcgtgccg aacccgcgct ccagcggctc ggcgacaacg gtcgcgacgc gccgcgggtc
     1621 gtcgccctgg gcgacatcca gcttgttcgg cttaatcagt tcctgccagt tcttctgaac
     1681 aaccacgacc acacctctca aggacggtca aagcgaaccg ccagccggtt cgccgaaaaa
     1741 cgaatgcgcg gatcgatccg cgcgctgatg agcgccgtca gacgcggcgg cgcttgcggg
     1801 gacggcagcc gttatgcggg atcggcgtca cgtcgcggat cgacgtcacc gtgaagcccg
     1861 cggactgcag cgcgcgcagc gccgactcgc ggcccgagcc ggggccggac acctcgacct
     1921 ccagggtgcg catgccatgc tcggacgcct tgcgggccgc atcctcggcg gcgacctggg
     1981 ccgcatacgg ggtcgacttg cgcgagccct tgaaacccat cgagccggcg gacgaccacg
     2041 agatcgtgtt gccgtgcgcg tcggtgatgg tgatcatcgt gttgttgaac gaggcgttca
     2101 catgcgccac gccggagacg atgttcttgc gttcgcggcg gcggacgcgg gttgcttctt
     2161 ttgccattca atcgatcctt caagcgcgcc cgtaacgcca ggcgctcggg agaatttttg
     2221 ttaagctgtc atggtcggcc ctgtgccggc catcccgatc agaaaggcga agcccgtccg
     2281 catcgagatc cccgggacaa gccgggggat gaccctgcgg gcggcgagcc gccctccggg
     2341 tcacgtcgac ttcttcttgc cggcgatcgg cttcgccttg cccttgcggg tgcgggcatt
     2401 ggtgtgcgtg cgctggccgc ggaccggcag gctacggcgg tgacgcaggc cgcggtagga
     2461 gccgaggtcc atgagccgct tgatgttcat cgacacttca cggcgcaggt cgccttcgac
     2521 catatagtcg cggtcgatgg tctcacggat ctgcaggatc tctgcgtccg tgagctggct
     2581 gacgcggcgc tcggccggaa tgccgacctt ttcggtgatt tcctgcgcct tcgtggcgcc
     2641 gatgccgtgg atgtattgca gcgcgatgac gacgcgcttg ttggtcggga tattgacgcc
     2701 tgcgatgcgg gccacgtgga tctccatatc gtccagggcg cgaggaccct ggcgaggtta
     2761 ttgtctgcgc gtccggtgga ggccggccct tgcgcgatta tgcaaaaaga caatagcccg
     2821 ggagacctct ttcgaagccg tccggaccgc catcctgtag caagagccgg gccaataccc
     2881 tgtcgctgct gctgcgtcaa gcggttagcg ccgtcaagtt gacgcagacg cgcaccgctc
     2941 ccggagggac aggtcgggtg cgccgagcgc acccggtgga cgtgagaagg gcgccctacc
     3001 agccctattc ctaggttctc gcccaggcgc gatcgttaac gggcgcgtcg ccggtcctgc
     3061 gcctcaagcg cccaacaccc ggaacaggtc gccgctgacc tcgtcgatcg tcttcatacc
     3121 gtcgacggtc ttcagggcgc ccttggagct gtagtaggcc gagagcggcg cggtctgggc
     3181 gcggtaggcc gtgaggcgcg tcttgaagac ctcgggattg tcgtccttgc gcaccggctc
     3241 gccgcgggcc tgcgtctccg ccgcccgctt gacgatgcgg tcgaccagag ccccctcgtc
     3301 gaccttcagc tcgaccactc cgtcgagctt gagccccttc ttcgccagta gcgtatcgaa
     3361 ggcctcggcc tgcgccaccg tgcgcggaaa gccgtcgagg atgaaaccgt tcctggcgtc
     3421 ggactcgtcg atccggtcgg cgatgattcc gaccacgacg tcgtcgggca cgagctcgcc
     3481 gcggtccatg atcgccttgg ccctgagccc gaccggtgtg ccggcggcca ccgcggcgcg
     3541 cagcatgtcc ccggtcgaca gctgcggaat cccgaaccgc tcgacgatgc gagccgcctg
     3601 cgtgcccttc cctgctcccg gcggccccag aaggatgatc ctcatggccg tcatgtcccc
     3661 ccgaactccc gctccgccgc accctcgcga cggccgcccc gcgtcagcgg cggcgcgccc
     3721 cccgcagctt ggccttcttg acgagccctt cgtattgatg cgccagcaaa tgtccatgga
     3781 cctgggccac agtgtccata gtcacc
//
LOCUS       DATAIQ010000543         3471 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_27782, whole genome shotgun sequence.
ACCESSION   DATAIQ010000543 DATAIQ010000000
VERSION     DATAIQ010000543.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3471)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3471)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3471
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_27782"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(316..771)
                     /locus_tag="VHN20_09015"
     CDS             complement(316..771)
                     /locus_tag="VHN20_09015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725944.1"
                     /translation="MARQAAEAARQTTDDLRERAGETVEQTAQWAREQYEQGTRQLDD
                     ARRRSMQQMERARGNVERFVSENPMMVGVMGLAAGLLIGALLPRTRQEDRFFGRWADD
                     LRDQGVRYAKEAAQRSRELVEDAVSAAGDYAPDEDRGGSRSSGPRYQNH"
     gene            complement(1015..1383)
                     /locus_tag="VHN20_09020"
     CDS             complement(1015..1383)
                     /locus_tag="VHN20_09020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725945.1"
                     /translation="MSRRLDDLERDVEATRARVDQTVDALQERLATQVGAAFAATLDV
                     VRRNPVPTILVVAGLGWLAHRMRAGTRYTAYQRIADKAADIPVLNTGNARIYDPDISP
                     RHPAPDSLESRRQVSAEVKA"
     gene            complement(1380..1772)
                     /locus_tag="VHN20_09025"
     CDS             complement(1380..1772)
                     /locus_tag="VHN20_09025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010687031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin family protein"
                     /protein_id="HEX2725946.1"
                     /translation="MDQNQSSIQGLISDALRDTSDLARKEMALFRAELSENVRTLIIG
                     VGMMVGAAVFAIAAIILFTEALVKWLATVVGSEALSALIVGGAMAVIAVGLVLYGRST
                     MSAASLMPNRAVRSIQRDTKVLSERVAG"
     gene            complement(1786..2349)
                     /locus_tag="VHN20_09030"
     CDS             complement(1786..2349)
                     /locus_tag="VHN20_09030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725947.1"
                     /translation="MASGYPDGDRQRQSGSGQRGEAPGDSGGMRDQVEHAAGAAVEQG
                     RHFLGAAKAQALTLAEQRKNDMAQTVSGLANSVRESGRAFEDRPQIRSLVDGAAQGLE
                     QVADSIQNRSVADLVNDIEAMVRRQPVLVAAATLAAGFLVARFVRSSAEGMRGFDQPG
                     GRSDATRRRQQPMQSRTQSPTRDEARA"
     gene            complement(2467..>3471)
                     /locus_tag="VHN20_09035"
     CDS             complement(2467..>3471)
                     /locus_tag="VHN20_09035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018262178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HEX2725948.1"
                     /translation="EAESKGGHSGRAAEEKAVTEADRGRAAESPWQIPAKGWKDILWR
                     TYEEMNQDRILAVAGGVTYFGLLALFPAVTALVSIYGLFADAVTINDHLAMLAGFMPG
                     GALDIIGEQVKRITDNGSTTLGFAFFFGLALALWSANAGVKALFDALNVAYGEAEKRS
                     FIKLNLLSMSFTLGAIVFVLVALGAIVVVPVILKFIGLGPVAEWVLWLARWPVLFAGV
                     IFALAVLYRYGPSRDNPQWQWITPGSVLAATVWIGGSMLFSWYVANFGNYNETYGSLG
                     AAIGFMTWLWLSVTIILVGAELNAEIEHQTTKDTTEGGPQPLGSRGAHMADTVGEAKA
                     "
BASE COUNT          547 a         1210 c         1108 g          606 t
ORIGIN      
        1 ccttgaacgt agcggatccc caccgcccgt agaggcaacg gcagcctctg acgcgagttc
       61 ctgcctgggc ggagccacca aggagttttg cgccagcacg cttaacggga ggttaccggg
      121 atgcctcgcg cttgactgag ctgaacgcgc gagccgaagt gcatgcgtgg cctaaagaat
      181 atccggcaaa gtgcacagca cttcgccgga tcagggcaag tcgcaggatc tcggaacggg
      241 ctcgcttcga tcgggagggg ccgcgctcga atcacccgtc cggccaggct gcgtccgccc
      301 ggccggagtc gggttttagt gattctggta gcgcgggccg gacgagcgcg acccgccacg
      361 atcctcgtca ggcgcgtagt cgccggccgc ggagaccgcg tcttcaacga gttcgcggct
      421 gcgctgcgcg gcctctttgg cgtaacgcac gccctgatcg cgcaggtcat ccgcccatcg
      481 tccgaagaag cggtcctcct ggcgcgtgcg cggcaggagc gcgccgatca ggagcccggc
      541 ggcgaggccc atgacgccga ccatcatcgg gttttcactg acaaaccgct cgacgttgcc
      601 gcgcgcccgt tccatctgct gcatggaccg gcggcgcgcg tcgtccagct gacgcgtgcc
      661 ctgctcgtat tgctcgcgcg cccattgcgc cgtctgctcc acggtctcgc ccgcccgctc
      721 gcgcaggtcg tccgtcgtct ggcgagccgc ttccgctgcc tgtcgcgcca tgtcgctcat
      781 tcctccgcct gttgcactgc caccgtgctg gcccgccgct ccggtgcttc gtccgctcgc
      841 agccggaccg ctgctttgat agggggaatt ctggggctgc ccggcgcttc cggtcgggga
      901 tgagccaacc gtggcggccg ataacgtgtc ggagccgctg ccctgtcctg aagccgtccg
      961 tccggcctcg tctctattcc tgtcgctcat tgccattcct cctcggttgc aagctcatgc
     1021 tttcacctcg gcgctcacct gacggcggct ctcgagcgaa tccggcgccg gatgccgcgg
     1081 tgaaatatcg ggatcgtaga tgcgcgcgtt gccggtgttg agaaccggga tgtcggcggc
     1141 tttgtccgcg attctttgat acgccgtgta gcgggtgccg gcgcgcatgc ggtgcgcaag
     1201 ccagccaagt ccggccacga ccaggattgt cgggaccgga ttccgcctca cgacgtccag
     1261 cgtcgcggca aaggccgcac cgacctgcgt cgccaatcgt tcctgaagcg cgtcgactgt
     1321 ctgatcgacg cgcgcccgtg ttgcctcgac atcccgttcg agatcgtcga gccggcgact
     1381 catccggcga ccctttcaga cagaaccttc gtgtcgcgtt ggatcgaccg caccgcgcgg
     1441 ttgggcatca ggcttgcggc cgacatcgtg ctgcggccgt agaggaccag cccgaccgcg
     1501 atcacggcca tggcgccgcc gacgatcagc gcggagagcg cctccgatcc gacgaccgtc
     1561 gccagccatt tgaccagcgc ctcggtgaac aagatgatgg ccgcgatggc gaagaccgcg
     1621 gcgccgacca tcatgccgac gccgatgatc aacgtgcgca cgttctcgga cagctcggcc
     1681 cggaaaaggg ccatctcctt gcgcgccaga tcgctcgtgt cgcgcaaggc gtccgagatc
     1741 aggccctgga tgctgctctg gttctgatcc attgcctcct ccgggtcagg cgcgggcttc
     1801 gtcgcgcgtg ggtgattgcg tcctgctctg catcggctgc tggcggcgcc gggtcgcgtc
     1861 ggaccggccg cccggctggt cgaagccgcg catgccttcc gccgagctcc ggacgaaacg
     1921 ggccaccagg aagccggctg ccaacgtggc ggccgcgacc aatacgggct gccggcgcac
     1981 catggcctcg atgtcgttga cgaggtcggc gacgctgcgg ttctggatgc tgtcggcgac
     2041 ctgctccagc ccttgcgcgg cgccgtccac cagcgagcgg atctgcggcc ggtcctcaaa
     2101 ggcgcggccc gactcgcgca ccgagttcgc cagaccggaa accgtctgcg ccatgtcgtt
     2161 cttgcgctgc tcggccagcg tgagcgcctg ggccttggcg gcgccgagga agtgacggcc
     2221 ctgctcgacg gccgctcctg ccgcgtgctc cacctgatct ctcattccgc cggaatcgcc
     2281 cggtgcctcg ccgcgctgac cgctgccgga ttgccgctgc ctgtcgccgt ctggataccc
     2341 gctggccatc agtgaacctc cttcgctctc gcaaaagtaa cccgtgggga tcgcgcccag
     2401 ttccctgcaa gcgtgtccat ttccactccg acgggtagaa accgctccct caatgcccag
     2461 ccgcaatcag gcttttgcct ctccgaccgt gtcggccatg tgcgcgccac gcgatccgag
     2521 cggctgcggc cctccctcgg tggtatcctt cgtggtctgg tgctcgatct cggcattgag
     2581 ctcggccccg acgaggatga tcgtgaccga gagccagagc caggtcatga agccgatcgc
     2641 ggcacccaaa gacccatagg tctcgttgta attgccgaaa ttggccacgt accaggagaa
     2701 cagcatcgag ccgccgatcc acaccgtggc ggcgagcacg cttcctggcg tgatccattg
     2761 ccactgcgga ttgtcgcggc tggggccata ccgatagaga acggccagcg cgaagatcac
     2821 cccggcgaac agaaccggcc agcgcgcgag ccagagaacc cattcggcga ccggtccgag
     2881 accgatgaac ttgaggatga ccgggaccac cacgatggcc ccgagtgcca ccaggacgaa
     2941 gacgatcgcg ccgagcgtga agctcatcga gagcagattg agcttgatga agctgcgctt
     3001 ctccgcctcg ccataagcaa cattcaatgc gtcgaacaag gctttcacgc cggcattcgc
     3061 gctccaaagc gccagcgcca ggccgaagaa gaaggcgaaa ccgagggtcg tgctgccgtt
     3121 gtcggtgatg cgcttgacct gctcgccgat gatgtcgagg gcgccgccgg gcatgaatcc
     3181 ggccagcatc gcgagatggt cattgatcgt cacggcgtcg gcgaagaggc catagatcga
     3241 gaccagcgcg gtgaccgcgg gaaacagcgc caggaggccg aaatacgtga cgcccccggc
     3301 caccgcgagg atgcgatcct ggttcatctc ctcataggtg cgccacagga tgtccttcca
     3361 gcccttggcc gggatctgcc acggcgactc ggcggcgcgt ccgcgatcgg cctcggtcac
     3421 cgccttctct tcggccgccc gcccggaatg accgcccttg ctttctgcct c
//
LOCUS       DATAIQ010000544         2277 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_305144, whole genome shotgun sequence.
ACCESSION   DATAIQ010000544 DATAIQ010000000
VERSION     DATAIQ010000544.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2277)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2277)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2277
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_305144"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            234..923
                     /locus_tag="VHN20_09040"
     CDS             234..923
                     /locus_tag="VHN20_09040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008189150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HEX2725949.1"
                     /translation="MAAGLGKRMRPLTDDRPKPMVELAGKPLIDHVLDRLRAAGVSRA
                     VVNVHYLPEVLEAHLAATARDLDVVISDERGLLLETGGGLVKAAPLIGCDPFLVVNSD
                     NYWVDGPADAMKLLASGWDDARMDALLLLVPQARAGNHRGQGDFHMDRFGRLRRRGRS
                     RVAPYVFTGIQIIAKRLLDGAPDGAFSTNLLWDRAIAEGRCFGAVHQGLWFDVGSPAA
                     LKATERALRDG"
     gene            916..2229
                     /locus_tag="VHN20_09045"
     CDS             916..2229
                     /locus_tag="VHN20_09045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725950.1"
                     /translation="MADRAPRPAPSVYTIPAHRSFADSLAAGLIRAHGREPMALAGGR
                     ILLPNARAVRTVTEAFVRASGSGLVLPRLIAIGDPELDDRIGGALDPAGVAEPVPPAI
                     DSLDRQLALAALLRQPGESVTESLRLAADLGRALDQLTIEGVDPASLAAVAAERPELA
                     GHWQASLDRVQAVLVHWPAELARRGVIDLADRRNRLLRQAAARWRASPPSGFTVAAGI
                     TTAAPAVADLLAAIAFMEDGMVVLPGLAGAKAMPDEEWDSLGPEEGKRGEETHPQYHL
                     KLLLERMGAARAEVETWPSAGRSSSPAARSRAVVNAMVSASFSDKWSRLEPGERRLPG
                     IRAAEFSDPASEALGIAIAVREALETPARTVALVTPDRSLAQRVSGHLQRWGIDADDS
                     AGKPLSQTAAGRLLLAAASLAAEDFAPVPLLALLKHPLAGAKDRL"
BASE COUNT          299 a          823 c          803 g          352 t
ORIGIN      
        1 ctgtggaagc gcgacggcaa gccgcattat cgcgccttcc agccgcgcat gtggggactg
       61 ctcgagcgcg atctcgccca gccggggctg gaacgggtgc gcaactggtt cgacgccaac
      121 gtgcccgctg acgcacgggc cgcggcttgg agcgacgcgg cgtgaaccgc gccgtccgcg
      181 cgctcaacct tcggccgcgg atcgacgccg ccgttccggc cacggcgatg gtcatggccg
      241 ccggcctcgg caagcggatg cgcccgctga ccgacgaccg gcccaagccg atggtcgagc
      301 tcgccggcaa gccgttgatc gatcacgttc tcgaccggct ccgtgccgcc ggggtgagcc
      361 gcgcggtggt caacgtccac tatctgcccg aagtgctcga agcgcacctc gccgccaccg
      421 cgcgcgacct cgacgtggtc atttccgacg agcgcggcct gctgcttgaa accggcggcg
      481 ggctggtcaa ggccgccccg ctgatcggct gcgacccgtt cctggtggtc aacagcgaca
      541 attattgggt cgacggcccg gccgatgcga tgaagctgct cgccagcggc tgggacgatg
      601 cgcggatgga tgctttgctg ctgctcgtcc cgcaggcgcg cgccggaaac catcgcgggc
      661 agggcgattt ccacatggac cgcttcggcc ggctccgccg ccgcggccgc tcgcgcgtcg
      721 caccttatgt cttcaccggc atccagatca ttgccaagcg tctgctggac ggcgctcccg
      781 acggcgcttt ctcgaccaat ctgttgtggg accgggcgat tgccgagggg cgttgcttcg
      841 gtgcggtgca ccagggcctg tggttcgacg tcgggtcccc cgccgccttg aaggcgaccg
      901 agcgggcgct ccgcgatggc tgatcgggcg ccgcgcccgg cgccgagcgt ctacacgatt
      961 cccgcgcacc gcagcttcgc agattcgctt gccgcgggac tgatccgcgc tcacgggcgg
     1021 gaaccgatgg cgctcgctgg cgggcggatc ctgctgccca atgcgcgcgc tgtccggacg
     1081 gtcaccgagg cgttcgtacg ggcaagcggc agcgggctcg tcctcccccg gctgatcgcc
     1141 atcggcgacc cggagcttga cgaccgcatc ggcggggcgc tggacccggc tggcgtcgcg
     1201 gagccggttc cgccggcgat cgactccctg gatcggcagc tcgcgctcgc tgccttgttg
     1261 cgccagcccg gagagtcggt gacggagtcg ctgcgcctcg ccgccgacct cggccgggcc
     1321 ctcgaccaat tgacgatcga gggcgtcgat cccgcgtcgc ttgccgccgt ggcagccgag
     1381 cggccggaac ttgcgggcca ctggcaggcc tcgctcgacc gagtccaggc ggtccttgtt
     1441 cactggccgg ccgagctcgc gcgcagggga gtgatcgacc tcgccgaccg ccgcaaccgg
     1501 ctgcttcggc aagccgcggc gcggtggcgc gcgtcgccgc cgtccggctt caccgtcgcc
     1561 gccggaatca ctaccgccgc tcccgcagtt gccgatctgc tcgccgcgat tgccttcatg
     1621 gaggacggga tggtcgtcct gcccggcctt gccggcgcga aggcgatgcc ggacgaggaa
     1681 tgggactcgc tcggccccga agaggggaag cgcggcgagg aaacccaccc ccaatatcat
     1741 ttgaagctgc ttctggagcg catgggcgcc gcaagggctg aggtcgagac ctggccgagc
     1801 gcgggccgct cgtcatcgcc ggctgcgcga tcccgtgccg tcgtcaacgc catggtcagc
     1861 gccagcttca gcgacaaatg gagccgcctg gagccgggcg aacggcggct gcccgggatt
     1921 cgtgcggcgg aattctccga cccggctagc gaggcgctgg gcatcgcgat cgccgtccgc
     1981 gaagcgctcg aaacaccggc gcgcaccgtt gctctggtca ctccggaccg ctcgctcgcc
     2041 cagcgggtca gcggccattt gcagcgctgg ggcatcgacg cggacgacag cgccggcaag
     2101 cccctgtcgc aaaccgccgc cgggcggttg ctgcttgcgg ccgcttcgct cgcggccgag
     2161 gatttcgcgc ccgtgccgct gctcgcgttg ctcaagcatc cgcttgccgg ggcgaaggac
     2221 cggctctagt ggctgaacga tgtgcgcgcc ctcgatctcg cgctgcgcgg cccgcgg
//
LOCUS       DATAIQ010000545         5458 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_151584, whole genome shotgun sequence.
ACCESSION   DATAIQ010000545 DATAIQ010000000
VERSION     DATAIQ010000545.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 5458)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5458)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5458
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_151584"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1381)
                     /locus_tag="VHN20_09050"
     CDS             complement(<1..1381)
                     /locus_tag="VHN20_09050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725951.1"
                     /translation="MSDASDSTPSTPDATAGVAQSRDRAADGDAESVSRRYRGRDFEI
                     SPAVTQQARVRPYQRRTDDPVYRPLRIFTLDPSVSKLDGATALVNVPYEPLKSGPRGR
                     LFHIVQNDGDPVCDLDEPRVLLTQGFAPARSDRCFQNQMVYAVCSSVYAAFKAALGRD
                     PAWGFVRNGDEERVPSGTLIVRPRAVNERNAHYDKSDGSLNFGYFTADATANRFMKGE
                     TIFTCLSHDVVAHELTHALLDGMRANFTIATQADVLAFHEAFADLVAVFQHFSYREVV
                     LAALKQSAGSVTAGLLTDLARPLAKASPDGRPSALRRACDDDAATPRRYDPSLEIHEL
                     GSVLVLAVFDAFDTIYRRKIERYIRLATGSGTLTKLRELSPDLQAVLAEEATQLASQF
                     LSICIRAIDYCPPVDLEFGEYLRALITADRELVPDDPWGYREALIDAFRERGILPSGV
                     TALDEAALVW"
     gene            complement(1381..2178)
                     /locus_tag="VHN20_09055"
     CDS             complement(1381..2178)
                     /locus_tag="VHN20_09055"
                     /EC_number="3.4.22.-"
                     /inference="COORDINATES: protein motif:HMM:NF012862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008234 - cysteine-type peptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="caspase family protein"
                     /protein_id="HEX2725952.1"
                     /translation="MAKHALCIGINDYPGTKSDLSGCVNDANDWAEALSARGYHTTKL
                     LDAKATKAAMVDALMQLVESGTPGDSLVFTYSGHGSWLPDDNGDEPDGRDEMLCPHDI
                     SDEQYLMDDELAKMFSRKKKDVLLYFISDSCHSGSVARFAADPLAGRDRMPKIRLLPP
                     LEFVKDEELRERIPLAMRAPTSSSNGEVYPALLISGCKDVEFSYDATFNGRANGAMTR
                     AAIDQLKKNPATPQEWFRGIRRQLPSQQYPQTPQLFGGTKAKRGPML"
     gene            2529..2963
                     /locus_tag="VHN20_09060"
     CDS             2529..2963
                     /locus_tag="VHN20_09060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008526294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FecR family protein"
                     /protein_id="HEX2725953.1"
                     /translation="MVQQAGFPPRQMIRCGTGLTVEATAGADYTLVDHDRDTVPDAVS
                     LRAGAVLVHVPPRAGGRTFRVQTPQAIAAVRGTDWAVDAAGAKTSVFVVSGRVAVQRA
                     GGARAVTLGPGDGVDVEGGAAPLQVKRWSAERAAALLARFGR"
     gene            2960..4882
                     /locus_tag="VHN20_09065"
     CDS             2960..4882
                     /locus_tag="VHN20_09065"
                     /EC_number="4.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019198435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_function: GO:0016849 - phosphorus-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0032555 - purine ribonucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEX2725954.1"
                     /translation="MSRRGWRRHLATVIAACAAGLWGAFLAAPHLAGDTSLLERLEAP
                     LTDLRFLLQGERPTPDIVTIVAIDDNTVRQAGAYPLPRAALAQLIERITSLGAKAIAL
                     DLLLVDPGPEAADEALASALRAAPVVIAAAGTFNSALQSLPRVEGSGLPGAPAADHLL
                     LPQPRFAEAAAVGTVNLATDRGGTPRYLSLVLQADSGVAVSLPLRAASLAVGRDPALE
                     PDGVVVGGRKISTDHGYRLPLRFYGSRGAVPTIGAAHVLAGRVHDDALRGRVVLVGAT
                     VTGGGDVFPTPFDPILPGVEVLATATAHLLVGDSLVRDWRVRGIDAAVAVSLPVLLVL
                     LLAWHRTIVGFAVIGFVVLLWVGVATAAFVNGVWLSATLPIVAAVPPAVIFGAARLLA
                     DRRRADSLEIESGTLRRFQPPSLADRLARDPAFLKEPVRQLAAVVFVDLSGFTGLSET
                     LGPSDTRTLLKTFHTLVDEEAVRGNGLVAAFMGDGAMILFGLPDPSDEDPCHAVRACV
                     GLSARTVAWLQSLPPPIAARLGFKIGAHFGMIVASRLGGGSHEHITAIGDTVNVASRL
                     MEVAADHSVVLALSDQLYQAAGAACEVLEAGALTGMHDVHIRGRAGTVRVWLWSGAAT
                     EHAAMRPPAVTSMRPA"
     gene            complement(4930..>5458)
                     /locus_tag="VHN20_09070"
     CDS             complement(4930..>5458)
                     /locus_tag="VHN20_09070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015668130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD-binding protein"
                     /protein_id="HEX2725955.1"
                     /translation="ASGSPAALDKARPVLGAMSQTLHELGPEPGTAAAFKMINQLLAG
                     VHIAVACEAIAFAAKLGLDIGKVYEVISQAAGTSWMFENRIPHVLEGDYRPLSAVNIF
                     TKDLGIVMDMGRAANFPVPMAATALQLFTMTSAAGMGHDDDSSVARFYAQTTGVTLPH
                     NMQADAASDREPERE"
BASE COUNT          772 a         1863 c         1904 g          919 t
ORIGIN      
        1 cccagacgag cgccgcctcg tcgagggcgg tgacgcctga cggcagaatt ccgcgctcgc
       61 ggaacgcatc gatcagggcc tcgcgatatc cccacgggtc gtcaggcacg agctcgcggt
      121 ccgcggtgat caaggcgcgc agatactcgc cgaactcgag atcgaccggc ggacaataat
      181 cgatggcgcg gatgcagatg gagaggaact ggctcgcgag ctgggtcgct tcctccgcca
      241 gcacggcttg cagatcgggg gagagctccc tgagcttggt cagcgtgccg ctgccggtcg
      301 ccaggcggat gtaacgctcg atcttgcggc ggtagatcgt gtcgaaggca tcgaacaccg
      361 ccagcacgag gaccgatccg agctcatgga tttcgaggct cgggtcgtag cggcggggcg
      421 tggccgcgtc gtcgtcgcag gcgcgccgca gggccgaggg gcggccgtca ggactcgcct
      481 tcgcaagcgg gcgcgcgaga tcggtgagca ggcccgcggt gaccgaaccc gccgactgct
      541 tcagggcggc gagcacgacc tcgcggtagc tgaaatgctg gaagaccgcg acaaggtccg
      601 cgaaagcctc gtgaaaggcc agcacgtccg cttgcgtcgc gatggtgaag ttcgcgcgca
      661 tgccgtcgag caacgcgtgc gtgagctcat gggcgacgac gtcatgggac aggcatgtga
      721 agatcgtctc acctttcatg aaccgattgg cggtcgcgtc agcggtgaag tagccgaaat
      781 tcagggagcc atcgctcttg tcgtagtggg cgttgcgttc gttgaccgcg cgcggccgca
      841 cgatcaacgt gccgctcggc acgcgctctt cgtcgccgtt gcgcacgaaa ccccatgccg
      901 gatcacggcc gagcgcggcc ttgaaggctg catagaccga gctgcagacg gcatagacca
      961 tctggttctg gaagcagcga tccgaccgcg ccggtgcgaa gccttgcgtc agcagcacgc
     1021 gcggttcgtc gaggtcgcaa acggggtcgc cgtcgttctg aacgatgtga aaaagccgtc
     1081 cacgcggccc ggacttgagt ggctcgtagg gcacgttgac gagcgctgtc gcgccgtcga
     1141 gcttcgacac gctcggatcg agcgtgaaga tccgcagcgg gcgatacacc gggtcgtccg
     1201 tccgccgctg atacgggcgg acgcgagcct gctgcgtcac ggcgggcgag atctcgaagt
     1261 cccgcccgcg atagcggcgc gacacgctct ccgcgtctcc gtcggcggcg cggtcacggg
     1321 actgcgctac gcccgccgtt gcgtccggcg tcgagggagt gctgtcgctc gcgtcgctca
     1381 tcagagcatc ggcccccgct tcgccttggt gccgccgaac agctgcggcg tctgcgggta
     1441 ttgctgggaa ggcagctgcc ggcggatgcc gcggaaccac tcctgcggcg tggccgggtt
     1501 cttcttgagc tggtcgatgg cggcgcgggt catcgctccg ttggcgcggc cgttgaacgt
     1561 cgcgtcgtag ctgaactcga cgtccttgca gcccgagatc agcaacgccg ggtagacttc
     1621 cccgttggag gaggaggtcg gggcgcgcat cgccaacggg atgcgctcgc gcagctcctc
     1681 gtccttgacg aattcgagcg gcggcagcag ccggatcttc ggcatgcggt ccctgcccgc
     1741 gagcggatcg gctgcaaatc gcgcgacgct gcccgagtgg caggaatccg agatgaagta
     1801 gagcagcacg tccttctttt tccggctgaa catcttcgcc agctcgtcgt ccatcaggta
     1861 ttgctcgtcg ctgatgtcgt gcgggcagag catctcgtcg cggccgtccg gctcgtcgcc
     1921 gttgtcgtcc gggagccagg agccatgccc cgaataggtg aacacgagcg agtctcccgg
     1981 agttccgctc tcgacgagct gcatcagcgc gtcgaccatg gccgccttcg tcgccttcgc
     2041 gtccaggagc ttggtcgtgt gatagccgcg cgccgaaagc gcctcggccc agtcgttcgc
     2101 atcgttgacg cagccgctga ggtccgactt ggtcccaggg tagtcgttga tcccgatgca
     2161 cagagcatgt tttgccatgt cgctctccct tgagttgcga cggcgcatcg cccgccggcc
     2221 cgcggggcgc atggaaccgg ccgcgcgcgc ccaggttgcc taacatgcac gtgtgaacgg
     2281 tctcgctgta tgattggcat cacattgccc acgtccccac cgtgtgcccg ccacccgtcg
     2341 ttggccgacg ccgcgcggca aatcgtgtta agctcatccc tctcgaccgt ataccgagcg
     2401 acgtgcgcgg agggatttcg atgggtggga acaggcatgg gcccaggcgc tctcatctcg
     2461 ccatcctggc actggccgcg atcgagttac tcgatcccgc cgcggtgttg gcccagggcg
     2521 caagttgcgt ggtgcagcaa gcggggtttc cgccgcgcca gatgatccgg tgcggcaccg
     2581 gcctgaccgt cgaggcgacc gcgggcgccg actacacgct cgtcgaccac gatcgcgaca
     2641 cggtgcctga tgccgtcagc ctgcgcgccg gcgccgttct ggtgcacgtc ccgccacggg
     2701 cgggcggacg caccttccgg gtgcagacgc cgcaggcgat cgccgccgtg cgcggcaccg
     2761 actgggccgt cgacgccgcg ggcgcgaaga catccgtgtt cgtcgtcagc ggccgcgtgg
     2821 cggtgcagcg ggcgggcggc gcgcgcgccg tgacgctggg gcccggggac ggcgtcgacg
     2881 tcgagggcgg cgccgcgccg ctgcaggtga agcgctggtc ggccgagcgc gcggcggcgc
     2941 tgctggcccg tttcgggcga tgagcaggcg aggatggcgg cggcacctcg ccaccgtcat
     3001 tgccgcctgt gccgcgggtc tgtggggcgc gtttctggcg gcgccgcatc tggccggcga
     3061 cacctctctg cttgagcggc tcgaagctcc tctcaccgat ctgcgtttcc tgctgcaggg
     3121 cgaacgtccg acgcccgaca tcgtcaccat tgtggcgatc gacgacaaca ccgtgcggca
     3181 ggccggagct tatccgttgc cgcgcgccgc cctcgcgcag ctgatcgaac gaatcaccag
     3241 tttgggcgcg aaggcgatcg ccctggacct gctcttggtc gatccaggcc ccgaggccgc
     3301 cgacgaggcg ctcgcatcag cgctgcgcgc ggcgcccgtg gtcatcgcgg cagccggcac
     3361 gttcaatagc gcgctgcaat cgcttcctcg ggtcgaggga agcgggctgc ctggcgcgcc
     3421 tgcggccgat catctgctgc tgccgcagcc gcgcttcgcc gaagccgccg ccgtcggcac
     3481 cgtcaatctc gccaccgatc gtgggggcac cccgcgctac ctgtccctcg ttcttcaagc
     3541 cgatagcggc gttgcggtat cgttgccgtt gcgcgccgcg tcgcttgccg tcgggcgtga
     3601 tcccgccctc gagccagacg gggtcgtggt cggtggacga aaaatcagca ccgatcacgg
     3661 ataccgactg ccgctgcgct tctacggatc gcgcggcgcc gtgcccacga tcggcgccgc
     3721 tcacgtgctg gcgggccgtg tccacgatga cgcgctgcgc ggccgcgtgg tgctggtcgg
     3781 cgcgaccgtg accggcgggg gcgatgtttt tcccacgccc ttcgatccga tcctgcccgg
     3841 ggtggaagtg ctggcgactg cgacggcaca tcttcttgtc ggcgacagcc tcgtccgcga
     3901 ctggcgcgtg cgcggcatcg atgcggccgt cgccgtgagc ctgccggtcc tgctggtgct
     3961 gctgctcgcc tggcatcgca cgatcgtggg cttcgccgtc atcggcttcg tggttctcct
     4021 ctgggtcggc gtagcgacgg ccgcgttcgt caacggcgtc tggctgagcg ccaccctgcc
     4081 gatcgtcgcc gcggtgccgc cggccgtcat ctttggcgcc gcgcgcctgc tggcggaccg
     4141 ccgccgcgcc gacagcctcg agatcgagag cggaacgctg cgccgcttcc agcccccgag
     4201 cctcgccgac cggctggcgc gcgatcctgc gttcctgaag gagccggtgc ggcagctggc
     4261 ggcggttgtg ttcgttgacc tgtcaggctt cacgggcctc agcgagacgc tcgggccgag
     4321 cgacacgcgc accttgctca agacctttca cacgctcgtc gacgaagaag cggtgcgcgg
     4381 caacgggctc gtcgccgcct tcatgggtga cggcgccatg atcctgttcg gcctgccgga
     4441 cccgtccgac gaggatccat gccacgccgt gcgcgcctgc gtcggcctga gcgcgcgcac
     4501 ggtggcgtgg ctgcaatcgc tcccccctcc gatcgcagcg cggctcggct tcaagatcgg
     4561 cgcgcatttc gggatgatcg ttgcgtcgcg cctcggcggc ggcagccacg agcacatcac
     4621 cgccatcggc gatacggtga acgtcgccag ccgcctcatg gaagtggcgg ccgatcacag
     4681 cgtcgtgctg gcgctcagcg atcagctcta tcaagccgcg ggcgccgcct gcgaggtgct
     4741 cgaggccggc gcgctgacgg gcatgcacga cgtgcacatc cgcggccgcg ccgggaccgt
     4801 gcgcgtgtgg ctgtggtcgg gcgccgcaac ggagcatgcg gcgatgcgcc cgcctgcggt
     4861 cacgtcaatg cgccccgcat gagacggcgt ggcatgtccc gaaccaaatg gctctggcgc
     4921 aaccgcccct tactcccgct caggctcccg gtcggacgcc gcgtcagcct gcatgttgtg
     4981 cggcagcgtc acgcccgtcg tttgcgcata gaaccgggcg acggatgaat catcgtcgtg
     5041 ccccatgccc gccgccgagg tcatcgtgaa gagctgcagc gccgtggctg ccatgggcac
     5101 ggggaaattc gcggcgcggc ccatgtccat gacgatgccg aggtccttgg tgaagatgtt
     5161 gacggccgag agcggcctgt agtcgccctc gagcacgtgc gggatgcggt tctcgaacat
     5221 ccacgacgtg cccgccgcct ggctgatcac ctcgtagacc ttgccgatgt cgagccccag
     5281 cttcgccgcg aaggcgatcg cctcgcaggc gaccgcgata tgtacgccgg cgagcagctg
     5341 gttgatcatc ttgaacgctg cggccgtgcc gggctcgggc ccgagttcgt gcagcgtctg
     5401 gctcatcgcg ccaagcaccg ggcgcgcctt gtcgagcgcg gcgggactgc ccgacgcg
//
LOCUS       DATAIQ010000546         2045 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_121091, whole genome shotgun sequence.
ACCESSION   DATAIQ010000546 DATAIQ010000000
VERSION     DATAIQ010000546.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2045)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2045)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2045
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_121091"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2045)
                     /gene="metH"
                     /locus_tag="VHN20_09075"
     CDS             complement(<1..>2045)
                     /gene="metH"
                     /locus_tag="VHN20_09075"
                     /EC_number="2.1.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008705 - methionine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="methionine synthase"
                     /protein_id="HEX2725956.1"
                     /translation="IHLDYFRAGSDIVETNTFSGTSIAQADYGLESIVYDLNREGARL
                     AREAAAIARKEDGRRRFVAGAVGPTNRTLSISPDVNNPGYRAVTFDEVRNAYAEQVRG
                     LVDGGAEIILIETIFDTLNAKAAIVAAQQVFAERGVRLPVMVSGTITDLSGRTLSGQT
                     PTAFWHSVRHADPITIGLNCALGAREMRAHIQEIGKVADTLVCAYPNAGLPNEFGLYD
                     ESPEATAAMLGEFAEAGLVNVVGGCCGTTPAHIRAIAQAVAGKKPRRLPELPRHMRLA
                     GLEPFTLTPDIPFVNVGERTNVTGSARFRKLIKTGEFAAALDVAREQVASGAQVIDVN
                     MDEGLLDSEKAMVDFLNLVAGEPDIARVPVMVDSSKFHVIEAGLKCLQGKAIVNSISL
                     KEGEEKFIAEARVCRAYGAAVVVMAFDERGQADTFERKVAICTRAYKVLTEQVGFPPE
                     DIIFDPNIFAVATGIEEHNGYGVAFVEAARQIRTNLPHVHISGGVSNLSFAFRGNEPV
                     REAMHSVFLYHAIAAGMDMGIVNAGQLAVYDEIDPELRELCEDVVLNRREDATERLLE
                     AAPRFKGDGSGPAKVGDLEWRTWPVARRLEHALVNGITEFIEADVEEARQQVERPLHV
                     IEGPLMAGMNVVGDLFGSGKMFLPQVVKSARVMKKAVAHLIPFIEAEKEATGATQGK"
BASE COUNT          319 a          682 c          691 g          353 t
ORIGIN      
        1 cttgccctgc gtagcgccgg tcgcttcttt ctccgcttcg atgaacggga tcaaatgggc
       61 gacggccttt ttcatcacgc gggcggattt cacgacctgg ggaaggaaca tcttgcccga
      121 gccgaacagg tcgccgacga cattcatgcc ggccatcagc gggccttcga tcacatgcag
      181 cggccgctcc acctgctggc gtgcctcctc gacgtcggcc tcgatgaatt ccgtgatgcc
      241 gttgacgagg gcatgctcga ggcgccgcgc caccggccag gtgcgccatt cgagatcgcc
      301 gaccttcgcg ggcccgctgc cgtcgccctt gaagcgcggg gccgcctcga gcaggcgctc
      361 ggtcgcatcc tcgcgccggt tgagaaccac gtcctcgcat agctcgcgca gctccggatc
      421 gatctcgtca tagacggcga gctggccggc attcacgatg cccatgtcca tgcccgcggc
      481 gatcgcgtga tagaggaaga ccgagtgcat cgcctcgcgc accggctcgt tgccgcgaaa
      541 cgcgaatgac aggttcgaga cgccgcccga gatgtgcaca tggggcaggt tcgtgcggat
      601 ctggcgcgcc gcctcgacga aggcgacgcc gtagccgttg tgctcctcga tgccggtcgc
      661 gacggcgaag atgttggggt cgaaaatgat gtcttccggg gggaagccga cctgctcggt
      721 caggaccttg taggcgcgcg tgcagatcgc gaccttgcgc tcgaacgtat cggcctggcc
      781 ccgctcgtcg aacgccatca cgacgacggc ggccccgtag gcgcggcaga cccgcgcctc
      841 ggcgatgaat ttctcctcgc cttccttgag cgagatcgag ttcacgatgg ccttgccctg
      901 gaggcatttc aggccggcct cgatgacgtg gaatttcgac gagtccacca tcacgggcac
      961 gcgcgcgatg tccggctcgc cggcgaccag gttcaggaag tcgaccatgg ccttctcgga
     1021 atcgagcagg ccctcgtcca tgttgacgtc gatcacctgc gcgccgctcg ccacctgctc
     1081 gcgcgccacg tcgagcgccg ccgcgaactc gccggtcttg atcagcttgc ggaacctggc
     1141 cgagccggtg acgttggtgc gctcgccgac attgacgaat gggatgtcgg gcgtgagcgt
     1201 gaacggctcg aggccggcca ggcgcatgtg ccgcggcagc tccggaaggc gacgcggctt
     1261 cttgccggcg accgcctgcg cgatagcgcg gatgtgcgcc ggggtggtgc cgcaacaacc
     1321 cccgaccaca ttgacgagcc cggcttcggc gaattcgccg agcatggccg ctgttgcttc
     1381 cgggctctcg tcgtagagac cgaactcgtt cggcaacccg gcattcgggt aggcgcagac
     1441 gagggtgtcg gcgaccttgc cgatttcctg gatatgggcg cgcatctcgc gtgcgccgag
     1501 cgcgcagttg aggccgatcg tgatcgggtc ggcgtggcgc accgagtgcc agaacgccgt
     1561 cggcgtctgc cccgacaggg tgcggcccga gagatccgtg atcgtccccg agaccatgac
     1621 cggcagcctg acgccgcgct ccgcgaagac ctgctgcgcc gcgacgatcg cagccttggc
     1681 gttgagcgtg tcgaagatcg tctcgatcag gatgatctcg gcgccgccgt ccacgagtcc
     1741 cctcacctgc tcggcatagg cgttgcgcac ctcgtcgaag gtgacagcgc ggtagcccgg
     1801 gttgttgacg tcgggcgaga tcgacagggt gcggttggtc ggcccgaccg cgccggcaac
     1861 gaagcggcgg cgcccgtcct ccttgcgcgc gatcgcggcc gcctcgcggg cgagccgcgc
     1921 gccctcgcgg ttgagatcat agacgatcga ctcaagccca taatcggcct gagcgatgga
     1981 ggtgcccgag aaagtgttgg tctcgacgat gtcggagccc gcccggaagt aatccaggtg
     2041 gattg
//
LOCUS       DATAIQ010000547         2824 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_397520, whole genome shotgun sequence.
ACCESSION   DATAIQ010000547 DATAIQ010000000
VERSION     DATAIQ010000547.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2824)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2824)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2824
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_397520"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            62..466
                     /locus_tag="VHN20_09080"
     CDS             62..466
                     /locus_tag="VHN20_09080"
                     /inference="COORDINATES: protein motif:HMM:NF012573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725957.1"
                     /translation="MPDVELGGGEDVIHGGPGNDTIDGGLANDRIFGDAGSDLIIGGY
                     QDDEMTGGAVDADTFRFLLGSRADRILDFEDDIDRLEISAAYGFADGSEVVATATVSG
                     SDITLHLTVDDTVTLVGFGTDPNALSNDIFIV"
     gene            complement(456..686)
                     /locus_tag="VHN20_09085"
     CDS             complement(456..686)
                     /locus_tag="VHN20_09085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725958.1"
                     /translation="MAFYPDASGGKHELYVMCDDVSAETARLAAAGVACGRVNDEGWG
                     LLTAIRLPGGGSLGLYQPQHPTAHAGIGAVTR"
     gene            complement(848..1609)
                     /locus_tag="VHN20_09090"
     CDS             complement(848..1609)
                     /locus_tag="VHN20_09090"
                     /EC_number="1.1.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018183872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose 1-dehydrogenase"
                     /protein_id="HEX2725959.1"
                     /translation="MKLDFRDRVALVTGAGAGIGRACAQAFARAGATVAATDIDGGAA
                     GAVADEIGGADGGAWAAALDVSDERQVGEVMAAAAARFGRIDVLVNNAGIGARVAAVD
                     LPLARWQRIIDVGLSGTFLCARAAAPHMMAQRAGAIVNVSSIMGLCGGGLYPNAGYHA
                     VKGALVNLTRALALEWAPHGIRVNAVAPAFTRTALVEPLLAEAGMAQKIVDATPLGRL
                     VEPDEVAAAVVFLASDHAAMITGHTLPVDGGWLAR"
     gene            1752..2759
                     /locus_tag="VHN20_09095"
     CDS             1752..2759
                     /locus_tag="VHN20_09095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017268874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HEX2725960.1"
                     /translation="MRYRSTRRSLFAALCLLGGLVLDQSSASAQVRLRYAHVGSEGDI
                     QYWFADEAAKKIPQVTEGRVTVQVFPNSQLGGVQEMIDGVKSGAISIGHHEFASLARL
                     AQDIAVFNAPFVYRDGAHALAATDPRKSEVLQEFNQKLVSGGGMRIVGRLFRGARQMT
                     AKQAVYSPSDLQGKRFRGVPIQLWTTMIRGFGAIPTPVEVAELPTALMTGMVIGQENP
                     LTMINANKLYEVQTHVMLTGHMQNVLPVFVNERVWQSISEKDRAAILDGLEEIAQETL
                     RQATKAESDLVDELRKKGMTFVTEKDGLKVAEFRERVNAEINKDFPTWKAYIDRIAAV
                     K"
BASE COUNT          468 a          998 c          930 g          428 t
ORIGIN      
        1 gagctcggcg tcaaggacgt cacgtggctg acgccgagcg gcgacgagat gacgccggag
       61 cattcccgac gtcgagcttg gcggcggcga ggacgtgatc catggcgggc ccggcaacga
      121 caccatcgac ggcgggctcg ccaacgaccg cattttcggt gacgcgggca gcgacctgat
      181 catcgggggc taccaggacg atgagatgac cgggggcgcc gtcgacgccg acaccttccg
      241 cttcctgctc ggctctcggg cggaccgcat cctcgatttc gaggacgaca tcgaccgcct
      301 cgaaatctcg gccgcctacg gcttcgccga tggcagcgag gtggtcgcga ccgcgacggt
      361 cagcggcagc gacatcacgc tgcatctcac cgtcgacgac accgtcacgc tggtcggctt
      421 cggcaccgat ccgaacgcgc tcagcaacga tatcttcatc gtgtgacggc gccgatgccg
      481 gcgtgcgccg tcgggtgctg cggctgatac aggccgagac tgccgccgcc gggcaggcgg
      541 atggcggtga gcaggcccca gccttcgtcg ttgacccggc cgcaggcaac gccggctgcg
      601 gcaagccgcg ccgtttccgc gctgacgtcg tcgcacatca catagagctc gtgcttgccg
      661 ccgctcgcgt cgggatagaa cgccacctcc gagggcggcg ccgcaaagat cagctagccg
      721 cctcccgcat cgaccgacga cagcccgagc acgtcgcgaa agaacgcgcg gtcggcttcc
      781 gcgtcgcgcg tgtagatgac cgcatgcagc cccgtgatcg tgctcacctc cgatctttct
      841 cctgtcctca acgcgcgagc cagccgccat cgaccggcag cgtgtggccg gtgatcatcg
      901 ccgcgtgatc gctcgccagg aagacgaccg cagctgccac ttcgtcgggc tcgaccagcc
      961 ttccgagcgg cgtcgcatcg acgatctttt gtgccatgcc cgcttccgcg agcagcggct
     1021 cgacgagggc cgtgcgcgtg aaggccggcg ccacggcatt gacccggatg ccgtgcgggg
     1081 cccattcgag ggccagggcg cgcgtcaggt tcaccagcgc gcccttgacc gcgtggtagc
     1141 cggcattggg gtaaagcccg ccgccgcaca gccccatgat cgacgagacg ttgacgatgg
     1201 cgccggcgcg ctgcgccatc atgtgcgggg ccgcggcgcg cgcacacagg aacgtgccgc
     1261 tgaggccaac gtcgatgatg cgctgccacc tcgccagcgg caggtcgacg gcggcgaccc
     1321 tggcgccgat gccggcgttg ttgaccagca cgtcgatgcg cccgaaacgc gcggccgccg
     1381 cggccatcac ctcgccgacc tggcgctcat cggagacgtc gagcgccgcg gcccaggcgc
     1441 ccccgtctgc gccgccgatc tcgtcggcga ccgcccccgc cgcgccgccg tcgatatcgg
     1501 tggccgcgac ggtcgcgccg gcgcgggcga aggcctgcgc gcaggcccgg ccgatgccgg
     1561 ctcccgcgcc cgtgacgagg gcgacccgat cccggaaatc aagcttcatg gtgcgccgcc
     1621 ggttttcgct tcggacaata tttcaatccc atccgtcgcc ggctttgcaa gctccggagg
     1681 atatgcaagc ttaatcgagc ggtttgcggg cgcgcgcctg ccaaagaaac caaccaatgg
     1741 aggaagcccc aatgcgttac cggagcacgc gccggagtct gtttgctgcc ttgtgcctgc
     1801 tcggcgggct ggttctcgac cagtcgtccg cctcggccca ggtccggctg cgttatgccc
     1861 atgtcggctc ggaaggcgac atccagtact ggttcgccga cgaggcggcc aagaagatcc
     1921 cgcaggtgac cgaaggccgg gtcaccgtgc aggtgttccc gaactcgcag ctcggcggcg
     1981 tccaggagat gatcgacggc gtcaagtccg gcgccatctc gatcggccat cacgaattcg
     2041 cctcgctcgc ccggctggcg caggacatcg ccgtgttcaa cgcgccgttc gtctaccgcg
     2101 acggcgccca cgcgctcgcc gcgaccgacc cgcgcaagtc cgaggtgctg caggagttca
     2161 accagaagct cgtgagcggt ggcggcatgc gcatcgtcgg ccgcctgttc cgcggcgccc
     2221 gccagatgac cgccaagcag gccgtctatt caccatccga cctgcagggc aagcgtttcc
     2281 gcggcgtgcc gatccagctc tggacgacga tgatccgcgg cttcggcgcg atcccgacgc
     2341 cggtcgaggt cgccgagctt ccgacggctt tgatgaccgg catggtgatc ggccaggaga
     2401 acccgctcac catgatcaac gccaacaagc tctacgaggt gcagacgcac gtgatgctga
     2461 ccggccacat gcagaacgtg ctgcccgtct tcgtcaacga gcgcgtctgg cagtcgatct
     2521 ccgagaagga ccgcgctgcc atcctggacg ggctcgagga gatcgcccag gagacgctgc
     2581 gtcaggccac gaaggcggag agcgacctcg tcgacgagct caggaagaag ggcatgacct
     2641 tcgtcaccga gaaggacggc ctcaaggttg ccgaattccg cgaacgcgtg aacgctgaga
     2701 tcaacaagga ctttccgacc tggaaggcct acatcgatcg catcgccgcg gtgaaataga
     2761 tcatcctccc tcaccggccc ggcgccgtcg cgtcgggcca aggccgcggc ttgcctctcc
     2821 atgt
//
LOCUS       DATAIQ010000548         2258 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_121142, whole genome shotgun sequence.
ACCESSION   DATAIQ010000548 DATAIQ010000000
VERSION     DATAIQ010000548.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2258)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2258)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2258
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_121142"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..831)
                     /locus_tag="VHN20_09100"
     CDS             complement(<1..831)
                     /locus_tag="VHN20_09100"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009762983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX2725961.1"
                     /translation="MTTTKLGFVGIGLMGEAMTRNLLDRGYAVTVWNLEPERLDTVVP
                     HGARPAASPGAVAEASDIVMTCVLHTAAVESVVFGPNGIAAAGCADKLLVDLSTADPA
                     ATREMAARLKRDTGMGWVDAPVSGGPPAARDGTMTVMAGGAPEDIARIGRLMTDMAGN
                     FTHMGPSGAGQTTKMINQAIVGTGFVLMAEALILAERAGIDAARLPECLAGGYADSNL
                     LKKLYPQMQARDFEPPRSYARQLLKDMKAVKDFARDFGLDLAVVEKAAEQYATFVAQG
                     N"
     gene            complement(873..2147)
                     /locus_tag="VHN20_09105"
     CDS             complement(873..2147)
                     /locus_tag="VHN20_09105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009208067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HEX2725962.1"
                     /translation="MTAFLLGSFTAFFLFGWPVVLAVMIPAVAYILWNGFPIELIGQR
                     MAYALDSFPLVAVPVFIFVGNLMNQSGITEVIYRFATTLVARVHGGLAQVNIVGSLIF
                     SGMSGAALADIGGLGRIEVKAMSSHGFKREFAGALTCASAIVGPIFPPSIPLIIYGSA
                     TNVSIIQLLLAGIVPALICVALLMVTVAYLAWRRNFPRAPRWPTLRELWADFLPAFPA
                     LMTPVLLVSGMLLGFFTPTEAASITVAYVIFISAVIYRTLTWQHLVHSAFETLKSTSA
                     ILIIVAAAALFGWIMAVEQIPQVMARSLLSLSTDPVMLLLIVNGILLIAGMFLDSTTA
                     TLLIIPIIAGPLHLAGVDPVHLGIVAIFNLMLGLLTPPMGLALFLITDIAKTSMRAVL
                     RELLPFYIPLLATLAIITFFPELSLWIPKMIR"
BASE COUNT          421 a          711 c          798 g          328 t
ORIGIN      
        1 gttgccctgc gccacgaacg tcgcgtattg ctcggcggcc ttctcgacga cggcgaggtc
       61 gaggccgaaa tcgcgcgcaa aatccttgac cgccttcatg tccttgagca gctggcgggc
      121 atagctgcgc ggcggctcga aatcgcgcgc ctgcatctgc ggatagagtt tcttgagaag
      181 attcgaatcg gcgtagccgc cggcgaggca ttccggcagg cgcgcagcgt cgatgccggc
      241 gcgctcggcc aaaatcagcg cctcggccat cagcacgaag ccggtgccga cgatcgcctg
      301 gttgatcatc ttggtggtct ggccggcgcc gcttgggccc atatgcgtga aattgcctgc
      361 catgtcggtc atcagccgac cgatgcgcgc gatgtcctcg ggggcaccgc cggccatcac
      421 ggtcatggtg ccgtcgcggg ccgccggcgg gccgccggag acgggggcgt cgacccagcc
      481 catgccggtg tcgcgcttga gccgcgccgc catctcgcgt gtggcggccg ggtcggcagt
      541 ggagagatcg acgagcagct tgtcggcgca gccggccgcc gcgataccgt tcggcccgaa
      601 cacgacgctt tcgaccgcgg ccgtgtgcaa gacgcaggtc atgacgatat cgctcgcctc
      661 ggcgacggct ccgggcgatg ccgcgggcct ggcgccgtgc ggcacgaccg tgtcgagccg
      721 ttccggctcg aggttccaga cggtcaccgc atagccgcgg tcgagaaggt tgcgggtcat
      781 cgcctcgccc atcaggccga tgccgacgaa gcccagtttt gttgtcgtca tttcgtgagg
      841 ctccagaatc gggcgcgtga acccgagaac gatcagcgga tcatcttcgg gatccagagc
      901 gacagctccg ggaagaaagt gatgatcgcc agcgtcgcga gcagcgggat atagaacggc
      961 aacagctcgc gcagcaccgc ccgcatcgac gtcttggcga tgtccgtgat caggaacagc
     1021 gccagcccca tcggcggcgt cagcagcccg agcatcaggt tgaagatcgc gacgatgccg
     1081 aggtgaaccg gatcgacgcc ggcgaggtgc agcggcccgg cgatgatggg gatgatcagc
     1141 agggtcgcgg tggtcgagtc gagaaacatg ccggcgatca gcaggatgcc gttgacgatc
     1201 aggagcagca tcaccgggtc ggtcgagagc gacagcaggc tgcgtgccat gacctgcggg
     1261 atctgctcga cagccatgat ccagccgaat aaggccgccg ccgcgacgat gatcaggatc
     1321 gccgaggtgc tcttgagcgt ctcgaaggcc gaatgcacga ggtgctgcca ggtgagcgtg
     1381 cggtagatca cggcgctgat gaagattacg taggcgaccg tgatcgaggc tgcttcggtt
     1441 ggcgtgaaga agccgagcag catgcccgag acgagcagga cgggcgtcat cagcgccggg
     1501 aaggcgggca ggaaatcggc ccaaagctcg cgcagggtcg gccagcgcgg cgcccgcgga
     1561 aagttgcggc gccaggcgag ataggcgacc gtgaccatca gcagcgcgac gcagatcaaa
     1621 gccggcacga tgccggccag cagcagttgg atgatcgaga cgttggtcgc cgagccgtag
     1681 atgatcaggg ggatgctcgg cgggaagatc ggcccgacga ttgccgacgc gcaggtcagg
     1741 gcgccggcga actcgcgctt gaagccatgc gagctcatgg ccttgacctc gatgcggccg
     1801 aggccgccga tgtcggccag cgcggcgccg ctcatgcccg agaagatcag gctgccgacg
     1861 atgttgacct gcgccagccc gccatgcacg cgcgccacga gcgtcgtcgc gaagcggtag
     1921 atcacctcgg tgatcccgga ctggttcatc agattgccga cgaagatgaa gaccggcacg
     1981 gcgacgagcg gaaacgagtc gagcgcatag gccatgcgct ggccgatcag ctcgatggga
     2041 aagccgttcc acaggatgta ggccacggcc gggatcatca cggccagcac gaccggccag
     2101 ccgaacagga agaacgccgt gaacgagccg agcagaaacg cggtcatggg ccaaccttcg
     2161 cggcccggtc ggcctcggcc accagcgccg cctcgagcgc gtccatgtcg tccggcggcg
     2221 cctcgtcgcc gaacgtcacg aaaagcgggc gccgggtc
//
LOCUS       DATAIQ010000549         3111 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_397534, whole genome shotgun sequence.
ACCESSION   DATAIQ010000549 DATAIQ010000000
VERSION     DATAIQ010000549.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3111)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3111)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3111
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_397534"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..255)
                     /locus_tag="VHN20_09110"
     CDS             complement(<1..255)
                     /locus_tag="VHN20_09110"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2725963.1"
                     /translation="MSLVIDALSFAYGRRVALAGICAGPLRRGQLTALVGPNGAGKST
                     LFRCLSGYLRARGRATLDGGELDAMRARERARRVFHLSQDL"
     gene            complement(255..1307)
                     /locus_tag="VHN20_09115"
     CDS             complement(255..1307)
                     /locus_tag="VHN20_09115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018328100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HEX2725964.1"
                     /translation="MTALAAPIGAGYRRAGLRRLALIGCGVAVLTAAFVVDLAIGPGP
                     YGLGDVLRALLGLAPGDVRLHVVVWDLRLPIAAMAVLAGAMLGLAGGAMQTILNNPLA
                     DPFTLGVSAAASVGASLAIAFGWGVVPGAGPLLVTMNAFAFALAASLVLFALTKLRGV
                     NAETMILVGVALLFTCNALLALIQYRANETQLQQIVFWMMGSLARASFEKIAVCGAAF
                     AGALLLLLARGWALTALRLGDERAESMGVGVERLRLEVLALVSLLAAISVAFVGAIGF
                     VGLVGPHIARLTVGEDQRFFLPVAALASAVILSLASTLSKALTPGVIYPIGIITALIG
                     VPFFVSLILAVRVRGA"
     gene            complement(1304..2509)
                     /locus_tag="VHN20_09120"
     CDS             complement(1304..2509)
                     /locus_tag="VHN20_09120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009468920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX2725965.1"
                     /translation="MTSRLRRFAERWRAPETLLSRFRALLLLVLIAAPLALASRPASA
                     AGIGETIEVTDLAGRTVTVKRGVRRMILGEGRQIYGLAVLDKDDPFRRVAGWKDDLKQ
                     NDPDAWRKYKAKFPHAESIADFGNPYSGDFSVEKVIALDADVVVLDLGNYFKARETGL
                     ITKLEKANIPTVFIDWREDPSQNTLPSLILLGRIMARESEALAFADFYLRQMRLVYTR
                     VGNLRESERPLVFMERAAGYNPNNCCATWGSTNFGKFVEDAGGRNWGSRFFSGSSGGD
                     VNPEKILADDPDFYFMTGANWSEAVPNTTAVLLGYEADAGKVQERIKALMTRPGMPLL
                     KAAKQKRVLALYHQFYNSPYAFVAVQAMARMLHPERFKDVDPEKTWEELHRRFLPVTP
                     GGVFWAAMQ"
     gene            2769..>3111
                     /locus_tag="VHN20_09125"
     CDS             2769..>3111
                     /locus_tag="VHN20_09125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015315449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725966.1"
                     /translation="MMPSRRLVLTAGALVAGAAGLTGLAGPAAAQSVEEFYKDKTLTI
                     YVGLSAGGGYDINARLVAKHIGRHIPGNPTVVVRNMPGGGGLVMTNYVANVAPKDGLH
                     MGAPQRGIPFEP"
BASE COUNT          545 a         1044 c         1090 g          432 t
ORIGIN      
        1 caggtcttgc gacaggtgga acacgcggcg ggcgcgctcg cgcgcacgca tcgcgtcgag
       61 ctcaccgccg tcgagcgtgg cacgaccccg tgcgcgcagg tagcccgaca ggcagcggaa
      121 cagcgtcgac ttgccggcgc cgttcgggcc gaccagcgcc gtgagctggc cgcgccgcag
      181 cgggcccgca cagatgccgg caagcgccac gcggcggccg taggcgaagc tcagggcatc
      241 gatgaccagc gacatcaggc gcctcgcacg cggacggcaa ggatcaggct cacgaaaaag
      301 ggcacgccga tcagggcggt gatgatgccg atcggataga tcacgccggg cgtgagggcc
      361 ttcgatagcg tcgaggcgag cgacaggatc acggcgctgg ccagcgccgc gaccggcagg
      421 aagaagcgct ggtcctcgcc gacggtgaga cgcgcgatat gcgggccgac cagcccgacg
      481 aagccgatgg cgccgacgaa ggcgaccgag atggcggcga gcagcgagac cagcgccagc
      541 acctcgaggc gcagccgctc gacgccgacg cccatgctct cggcgcgctc gtcgccgagg
      601 cgcaaggccg tgagcgccca gccgcgcgcc agcaggagca gcagcgcgcc ggcgaacgcg
      661 gcgccgcaga ccgcgatctt ctcgaagctg gcacgggcga ggctgcccat catccagaac
      721 acgatctgct gcagctgcgt ctcgttggcg cggtactgga tcagcgccag cagggcgttg
      781 caggtgaaca ggagcgccac gccgacgagg atcatggtct cggcgttgac gccgcgcagc
      841 ttggtgagcg cgaacagcac cagcgacgcc gccagcgcga aggcgaaggc gttcatggtg
      901 acgagcaacg gcccggcgcc cggcaccacg ccccagccga aggcgatcgc cagcgacgcg
      961 ccgacgctcg ccgccgccga cacgccgagc gtgaacgggt cggcgagcgg gttgttgagg
     1021 atcgtctgca tggcgccgcc ggcgaggccg agcatcgccc cggccagcac cgccatggcg
     1081 gcgatcggaa ggcgcagatc ccacacgacc acgtgcaggc ggacgtcgcc gggcgcgagc
     1141 ccgaggagcg cccgcagcac gtcgccgagc ccgtacgggc cgggcccgat ggcgaggtcg
     1201 acgacgaacg ccgccgtcag caccgccacg ccgcagccga tcaatgccag gcggcgcagc
     1261 ccggcgcgcc ggtagccggc gccgatcggc gccgcgagcg ccgtcattgc atcgcggccc
     1321 agaacacgcc gccgggcgtc accggcagga agcggcggtg cagctcctcc caggtcttct
     1381 caggatcgac gtccttgaag cgctccggat gcagcatcct ggccatggcc tggacggcga
     1441 cgaaggcgta gggcgaattg tagaactggt ggtagagcgc cagcacgcgc ttctgcttcg
     1501 ccgccttgag cagcggcatg ccgggccgcg tcatcagcgc cttgatgcgc tcctgcacct
     1561 tgccggcatc ggcctcgtag ccgagcagga ccgcggtcgt gttcggcacg gcttccgacc
     1621 agttggcgcc ggtcatgaag tagaagtcgg gatcgtcggc caggatcttt tcggggttga
     1681 cgtcgccgcc gctcgagccg ctgaagaagc gcgagcccca gttgcgcccg ccggcgtcct
     1741 cgacgaactt gccgaagttg gtcgagcccc aggtcgcgca gcagttgttc gggttgtagc
     1801 cggccgcgcg ttccatgaag acgagcggcc gctcgctttc gcgcaggtta ccgacgcgcg
     1861 tgtagacgag ccgcatctgg cgcagataga agtcggcgaa ggcgagcgcc tcgctctcgc
     1921 gcgccatgat gcggccgaga aggatcaggc tcggcagcgt gttctggctc ggatcctcgc
     1981 gccagtcgat gaacaccgtc gggatgttcg ccttctcgag cttcgtgatc agcccggtct
     2041 cgcgcgcctt gaagtagttg ccgaggtcga gcacgaccac gtcggcgtcg agcgcgatca
     2101 ccttctcgac ggaaaaatcg cccgaatagg gattgccgaa atcggcgatc gattcggcgt
     2161 gcgggaactt cgccttgtat ttgcgccagg cgtccgggtc gttctgcttg aggtcgtcct
     2221 tccagccggc gacgcggcgg aacgggtcgt ccttgtcgag caccgccagc ccgtagatct
     2281 ggcggccttc gcccaagatc atgcgcctga cgccgcgctt caccgtgacg gtgcggccgg
     2341 cgaggtcggt gacctcgatg gtctcgccga tgcccgctgc ggatgcggga cgcgaagcta
     2401 gcgccagcgg cgcggcgatg aggacgagaa ggagaagcgc gcggaagcgg gaaagtagcg
     2461 tttcgggcgc gcgccagcgc tcggcgaaac gacgaagtcg tgacgtcatg acaacctctt
     2521 cggaccaggg ttcaaggccc tgcgtgagag tggatgcggc gcggacagtg gcgacgctga
     2581 tccgaaaagg caagcaaaat cagtatgtta gaattgttct taggtggaat gattctagag
     2641 tgcgccaact cgtcccttcg ctaaccctga tgcggagaat ctggagactg cagcggacgt
     2701 catttgacgc ccgcctccgc atcggcatca tggcgccaac ccaaaaaacc accttaggga
     2761 gttgatcgat gatgccgtcc cgccgccttg tcctgactgc cggcgccctc gtggccggcg
     2821 ccgcgggcct cacgggcctc gcaggtcccg ccgccgcgca gagcgtcgag gaattctaca
     2881 aggacaagac gctgaccatc tatgtcggtc tgtcggccgg cggcggctac gacatcaatg
     2941 cccggctggt cgcgaaacat atcgggcgcc acatccccgg aaacccgacc gtggtcgtgc
     3001 gcaacatgcc gggcggcggc ggcctcgtga tgaccaacta cgtcgccaac gtcgcgccca
     3061 aggacgggct gcatatgggc gcgccgcagc gcggcatccc gttcgagccg c
//
LOCUS       DATAIQ010000550         5073 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_335607, whole genome shotgun sequence.
ACCESSION   DATAIQ010000550 DATAIQ010000000
VERSION     DATAIQ010000550.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 5073)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5073)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5073
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_335607"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..258
                     /locus_tag="VHN20_09130"
     CDS             <1..258
                     /locus_tag="VHN20_09130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725967.1"
                     /translation="AGLLPLFGFGAADVKDYRLARWGHPLPLAATGLIANGVVDTLRR
                     PMADKVFFVEQDNWAVPAIETAIGESLVFAPQIADRLGAPR"
     gene            complement(338..577)
                     /locus_tag="VHN20_09135"
     CDS             complement(338..577)
                     /locus_tag="VHN20_09135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725968.1"
                     /translation="MFGEADPLRRKDASACGEVAIEICGVVIVGEIQEGGPPRRADAR
                     HGEGKADGRADQDDAKADRKQLKEQQHANEVTRNP"
     gene            complement(1112..1417)
                     /locus_tag="VHN20_09140"
     CDS             complement(1112..1417)
                     /locus_tag="VHN20_09140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006019285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725969.1"
                     /translation="MHLIQLLLPLYDNDGAALPRALFDKVREELSGRFGGLTAFTRAP
                     AEGHWRAEGETRRDDIVIFEVMTERLDRDWWRGYRRELERSFRQEEIVIRAQDIELL"
     gene            1650..2660
                     /locus_tag="VHN20_09145"
     CDS             1650..2660
                     /locus_tag="VHN20_09145"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX2725970.1"
                     /translation="MKHVVAAALLAGSIGAAQAQDLIPVDLSLGDVSLNKVAFLVAAD
                     NGIYERNGLKVRQFITANAANRIKRSGVNVPPEFVGTEEEEEAAPLTIGGGSPLIVKM
                     TSDARTTNRVILATFEDTSKFHIISKKELNSLEDLKGKRLGYSSFGAVSHLMALALLK
                     RNGWSPEDDISLIGEGMAYEALRKNKVDAFIGSEIYYAMAEKQGFKDLADITPLKIPV
                     AGSGINADREWLKNNREAARRFVKASIDAYAFMKNNKDATLKAIEKWYNVKDRAQQEA
                     MYKTVEATPMKPYPSVSGIEQVLALYTYRELKQRKPEDFYDASFMTELDKSGYIDAVY
                     NR"
     gene            complement(3036..3698)
                     /locus_tag="VHN20_09150"
     CDS             complement(3036..3698)
                     /locus_tag="VHN20_09150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009488891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6766 family protein"
                     /protein_id="HEX2725971.1"
                     /translation="MQRFLRDNGLSITLFGLFFICIIGQALTGWRAHVEELRSHGGPA
                     IGLLAYLQSGHFLSAVFENWESEFLQMAVYVLLTVFLFQKGSAESKNPDEDNPEDDAP
                     HRRRGDAEAPWPVHRGGLILKLYSHSLSIALLSMFLVSFWLHLAGSTRRMNGEALQHG
                     RPIKTMIETLADAQFWFESFQNWQSEFLSIAVLIVLGIFLRERGSPESKPVAAPHAMT
                     GH"
     gene            4001..>5073
                     /locus_tag="VHN20_09155"
     CDS             4001..>5073
                     /locus_tag="VHN20_09155"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4118 domain-containing protein"
                     /protein_id="HEX2725972.1"
                     /translation="MGRLRPCLVSALGVALATLAGLALTALGPLPNVSMVFLLAVVFA
                     AARFGIWPALLASVLSFLAYNFFFIEPLHTFSVARPEELLALFVFLAIALLTSALAGR
                     AKDEATRAARLTEEIVAARTAAEMERLRNTLLASVSHDFRTPLASILGAASGLLEYGT
                     RLPEAARADLLGQIRDEAEHLDGMVRNLLAITRVEAGALEINRDWLDVREVLHRAVAT
                     ARRHGASQSFEVASPSDTPFIAADPNLLDQALANVVTNAMRYAGAAARIALEGRREGG
                     EMVISVTDDGPGIDPHLLPRVFDRFVRASSGGDAGEGTGLGLAIAKGIVEAHGGSIAA
                     VSPVRDGRGTRIVMRLPLAKEARR"
BASE COUNT          857 a         1700 c         1650 g          866 t
ORIGIN      
        1 gcggggcttc tgccgctttt cggattcggc gcggcggacg tgaaggatta ccggctcgcg
       61 cgctggggcc acccgctgcc gctcgccgcc accggtctga ttgccaacgg cgtcgtcgac
      121 acgctgcgcc ggccgatggc ggacaaggtg ttcttcgtcg agcaggacaa ttgggccgtg
      181 cccgcgatcg agacggcgat tggcgagtcg ctggtcttcg ccccgcaaat cgccgaccgg
      241 ctcggcgcgc cgcgctgacc ctttcagcgc agcggacgat tattgtcgcc gattcgcgtt
      301 ctcgacgccc gtttctccga tcggcttaag attcggttca cggattgcgg gttacctcgt
      361 tggcatgttg ctgttccttc agctgcttgc gatcggcctt tgcgtcgtcc tgatcggcgc
      421 gtccgtcggc tttgccttca ccatggcggg cgtcggcgcg tcgcggcggt ccaccctcct
      481 ggatctcacc gacgatcacg acgccgcaga tctcgatcgc aacctctccg cacgctgacg
      541 catctttccg gcgaagcggg tccgcttcgc cgaacaatgc gtctccggca atctcaccgc
      601 atgcggcggc gacgcgtgct cgcggcgccc ttcggcacgg ctggagcatg atccggcgaa
      661 gtggataccg cttcgccgaa gaaggcttgt cccggactgg atccgggatc atgcggctca
      721 ataaaaaaca gagcgggacc gattcaatct gaatcgatcc cgctctggcg ccacgtcgcc
      781 gggccgacgc gagggcgcgc gttaagaggt cgttaacctt ggcgtggtcc gttcggcgcc
      841 agaagagtgg agacggactc atggcgcccg acgcgaccgc aggaacccgg atagtgcaag
      901 gcctcgacga cctgcagaca ctcaggtcgc agctcgagca tgtccgcggc atggtccgca
      961 tgatggagcg gcgcccgagt cccctattgg acacccctcg gcctgcacac gccgacaagc
     1021 gcgagacgcg aggcttcttc aagcgcgtct tcggctaggg ctccggcaat gacaacgtga
     1081 aggtttcccg cgacacgccc tacggcgcgc gtcaaagaag ctcgatatcc tgcgcgcgga
     1141 tgacgatttc ttcctgccgg aagctgcgct cgagctcgcg ccggtagccg cgccaccagt
     1201 cgcggtcgag gcgctccgtc atcacctcga agatgacgat gtcgtcgcgc cgcgtctcgc
     1261 cctcggcgcg ccaatgcccc tcagcgggcg cgcgcgtgaa ggccgtgagc ccgccgaagc
     1321 ggccggacag ctcctcgcgc accttgtcga acagcgcccg cggcagggcc gcgccgtcgt
     1381 tgtcgtaaag cggaagcagg agctggatca ggtgcacggg ccggctatgg cacggccgcg
     1441 gccgcaaggg caaccgggcg ggcccagagg ggcggctgca tcgtacggcc ccacttcgac
     1501 tccgcgcgta taggatccgc cccggacaac aggcttggat ctccggtccg tgcatggcgc
     1561 agcagggctg gcccgtggcg cgcttgtccg cccattgggg cgccgctacg ctgcccgcgc
     1621 atcgctcaca ccagatcggg gaatccacga tgaagcacgt tgtcgccgcc gccttgctcg
     1681 ccggctcgat cggagccgcg caggcgcagg acctgattcc ggtggacctg tcccttggcg
     1741 acgtctccct gaacaaggtc gccttcctgg tcgccgccga caacggcatc tacgagagga
     1801 acggcctgaa ggtcaggcag ttcatcaccg ccaacgcggc gaaccgcatc aagcgcagcg
     1861 gcgtcaacgt gcctccggaa ttcgtgggca ccgaggagga ggaagaggcg gcgcctctca
     1921 ccatcggcgg cggctcgccg ctgatcgtca agatgaccag cgatgcgcgc accaccaatc
     1981 gggtgatcct ggcgaccttc gaggacacgt cgaagttcca catcatctcg aagaaggagc
     2041 tcaattccct tgaagacctc aagggcaagc gcctcggcta ttccagcttc ggtgcggtca
     2101 gccatctgat ggcgctggcg ctgttgaagc ggaatggatg gagcccggag gacgacatct
     2161 cacttatcgg cgaggggatg gcctacgagg cgctccgaaa gaacaaggtc gacgccttca
     2221 tcggcagcga gatctattac gccatggcgg agaagcaggg tttcaaggat ctggccgaca
     2281 tcacgcccct gaaaatcccg gtcgccggct ccggcatcaa cgccgaccgc gagtggctga
     2341 agaacaaccg cgaggccgcg cgtcgtttcg tgaaggcgtc catcgacgcc tatgcgttca
     2401 tgaagaacaa caaggacgcc acgctgaagg cgatcgagaa gtggtacaac gtcaaggatc
     2461 gcgcccagca ggaggccatg tacaaaaccg tcgaggcgac gccgatgaag ccttatccgt
     2521 cggtctccgg catcgagcag gtgctggcgc tctacaccta ccgcgagctc aagcaaagga
     2581 agccggagga tttctatgac gccagcttca tgacggagct cgacaagagc ggctatatcg
     2641 acgccgtgta caacagatag ccggcgcgaa ggaccgtccg ctcgcgcctg tttgcgcgtt
     2701 cagccccggt cgcggcagga cgtcgacaag ctgcagccca tcatcgcgcg ttacggcgag
     2761 acgagcgcct cgaaccagcc ggggcgcatc aagaaggcgc gtcccttccg caaacaggag
     2821 ggcggctcct gtctcgtgcg cgacctgcat ggatggccag cgcatgcgtc ccgacgggcg
     2881 tcgcgttaga gcatgatccg gcgaaagcct gcccccggac ttgatccggg ggtggacacc
     2941 gcttcgccga aaaaggcttg tcccggactt gatccgggat catgcgactc gatgaaaagc
     3001 agagcgggat caattcaatc agaattgatc ccgcgttaat gcccggtcat ggcatgcggc
     3061 gcggcgaccg gcttcgactc cggcgagccg cgctcgcgca ggaagatgcc gaggacgatc
     3121 agcactgcga tcgacaggaa ctcgctctgc cagttctgga agctctcgaa ccagaactgc
     3181 gcatccgcca gcgtctcgat catggtcttg atcgggcggc cgtgctgcag ggcctcgccg
     3241 ttcatgcgcc gcgtgctgcc ggcgagatgc agccagaacg agacgaggaa catcgacagc
     3301 aacgcgatgc tgagggagtg cgaatagagc ttgaggatga ggccgccgcg gtgcacgggc
     3361 caaggcgcct cggcatcgcc gcgccgcctg tgcggcgcgt cgtcttctgg gttgtcctcg
     3421 tccgggttct tggactcagc cgatcccttc tggaacagga acaccgtcag gagcacgtag
     3481 accgccatct gcaggaactc gctctcccag ttctcgaaca ccgccgacag gaaatggccg
     3541 ctttgcaggt aggcgaggag cccgatcgcg ggcccgccat gcgaccgaag ctcctcgaca
     3601 tgggctctcc agccggtgag cgcctggccg atgatgcaga tgaagaacag gccgaaaagc
     3661 gtgatcgaga ggccgttatc gcgcaggaag cgctgcattc cgcgactccg ggacgtgaga
     3721 gaactgccaa gtttcaaccc gcaataggtg cttttgttcc tagtgcatgg cccccacagg
     3781 gccgtttacg cggcgcttat gtcgtgccgc gaccttcgac atcgaccttt gatgcgcgat
     3841 cctcgtaaac tccgacggcc atcgggatgg accaggcatg gttgaggcca tatccttgcg
     3901 cgcggtgaga tttccctttt tcccgcgccc tgcggccccg ccgggcgccg cttgccggcg
     3961 cacggtggcg tcgtcgttct ccctcccgag gtggccgccc ttggggcgcc tgcggccctg
     4021 cctcgtgtcg gctctcggcg tcgcgctcgc gaccctggcc gggcttgcgc tgaccgcact
     4081 cggcccgctc ccgaacgtct cgatggtgtt cctgctggcc gtcgtcttcg cggcggcacg
     4141 cttcggaatc tggcccgcgc tccttgcttc ggtgctctcc ttcctcgcct acaacttctt
     4201 cttcatcgag ccgctccaca ccttcagcgt cgcccggccg gaggaactgc tcgcgctctt
     4261 cgtctttctt gccatcgccc tcctcacctc ggctcttgcc gggcgtgcca aggacgaggc
     4321 gacgagggcg gcgcgcctga cggaggagat cgtggccgcg cgcaccgctg ccgagatgga
     4381 gcgtctgcgc aacacgctgc ttgcttcggt gagccatgat ttccgcacgc cgctcgcctc
     4441 gatcctcggc gcggccagcg gtctcctcga atacgggacg cgcctgccgg aggcggcgcg
     4501 ggcggacctg ctcggtcaga tcagggacga ggcggagcat ctggacggca tggtgcgcaa
     4561 tctcctcgcc atcacgcgcg tggaggccgg cgcgctcgag atcaaccgcg actggctgga
     4621 cgtccgggag gtgctgcatc gcgcggtcgc gacggccagg cgccacggcg cctcacagtc
     4681 gttcgaggtc gcgtcgccgt ccgacactcc cttcatcgcc gccgacccca accttctcga
     4741 ccaggccctc gccaacgtgg tgacgaatgc gatgcgttac gcaggcgccg ccgcccgcat
     4801 cgcgctcgaa ggccggcgcg agggcggcga gatggtcatt tccgtcaccg acgacgggcc
     4861 gggcatcgac ccgcatctgc tgccgcgggt tttcgaccga ttcgtgcggg catcgtcggg
     4921 cggcgacgcg ggcgagggga cgggccttgg tctcgccatc gccaaaggga tcgtggaggc
     4981 gcatggcggc tccatagccg ccgtcagtcc tgtccgtgac ggccgcggaa cgcgcatcgt
     5041 catgcgcttg cctttggcga aggaggcaag gcg
//
LOCUS       DATAIQ010000551         1538 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_28211, whole genome shotgun sequence.
ACCESSION   DATAIQ010000551 DATAIQ010000000
VERSION     DATAIQ010000551.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1538)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1538)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1538
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_28211"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            119..889
                     /locus_tag="VHN20_09160"
     CDS             119..889
                     /locus_tag="VHN20_09160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009796793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase cyclase
                     subunit"
                     /protein_id="HEX2725973.1"
                     /translation="MANVRLIARLDLKMDFLIKGVQLEGWRKVGDPSEFARRYYQGGA
                     DELLYMDVVASLYDRNNLDNIVRRAAEEIFIPITVGGGIRRLEDVKALLAVGADKVAI
                     NTAATRDPELLRRISDTYGSQATVLSIEAKRLPQGGWEAMTDNGRNHTERDPVRWAAE
                     AQALGAGEILVTSIDRDGTEKGMDIELIKAITREVDIPVIAAGGVGRAEHVLEALTTG
                     GAGAVAMAKALHYNKVGLPALRERLAGEGVPVRALEEA"
     gene            892..>1538
                     /gene="hisH"
                     /locus_tag="VHN20_09165"
     CDS             892..>1538
                     /gene="hisH"
                     /locus_tag="VHN20_09165"
                     /EC_number="4.3.2.10"
                     /inference="COORDINATES: protein motif:HMM:TIGR01855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000107 - imidazoleglycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016884 - carbon-nitrogen ligase activity,
                     with glutamine as amido-N-donor [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HEX2725974.1"
                     /translation="MSAKEVVVVDYQIGNVFSVCNAVSAAGCSPVLTGDPKRVASAER
                     LILPGVGAFARAMQELEGHGLVEPILDFVKTGRPFLGICVGMQMLMDESTEFGVNPGL
                     GLIPGRVDRIPDTTEAGEPHPVPHISWGALTTPPGASADAWAGTPLEKLSPGRSSVYF
                     VHSYMCNPTDQHALLATVDYDGRPLTAAIRKDNITGVQFHPERSGMAGQKVLAAFL"
BASE COUNT          249 a          545 c          525 g          219 t
ORIGIN      
        1 atttcgacgc gctcgccaac cggttccgcc cgccgcatct gtgggcctac gaccgcggcg
       61 agtggaagct gcggcgcacc gtgttcgaca gcaacgtgcc cgacgcgggg aggcaggcat
      121 ggccaatgtc cgcctgatcg cccgtctcga cctcaagatg gacttcctga tcaagggagt
      181 tcagctcgaa ggttggcgga aggtcggtga cccgagcgag ttcgctcgcc gctactacca
      241 gggcggcgcg gacgagctgc tctacatgga cgtggtggcg agcctctacg accgcaacaa
      301 cctcgacaac atcgtgcgcc gcgccgccga ggagatcttc attccgatca cggtcggcgg
      361 cggcatccgg cgcctggaag acgtcaaggc gctgctggcg gtcggggccg acaaggtcgc
      421 gatcaacacg gcggccacgc gcgaccccga gctcctgcgc cgcatctccg atacctatgg
      481 ctcgcaggcg accgtgctgt cgatcgaggc caagcgcctg ccgcaaggcg gctgggaggc
      541 catgaccgac aacggccgca atcacaccga gcgcgacccg gtgcgctggg ccgccgaggc
      601 gcaggccctg ggcgccggcg agatcctggt cacctcgatc gaccgcgacg gcaccgagaa
      661 gggcatggac atcgagctga tcaaggcgat cacccgcgag gtcgatatcc cggtcatcgc
      721 cgccggcggc gtcgggcgcg ccgagcacgt gctcgaggcg ctgacgaccg gcggcgcggg
      781 cgcggtcgcc atggccaagg ccctgcacta caacaaggtc ggcctgcctg ccttgcgtga
      841 gcgcctcgcc ggcgagggcg tgccggtgcg ggccctcgag gaggcgtgat cgtgtccgcc
      901 aaggaagtcg tcgtcgtcga ttaccagatc ggcaacgtgt tctcggtctg caacgcggtg
      961 tcggcggccg gctgcagccc cgtgctgacc ggagatccga aacgcgtcgc aagcgccgag
     1021 cggctgatcc tgcccggcgt cggcgcgttc gcccgcgcga tgcaggagct cgaaggccac
     1081 ggcctcgtcg agccgatcct tgatttcgtc aagaccggcc gtccgttcct cggcatctgc
     1141 gtcggcatgc agatgctgat ggacgagagc accgagttcg gggtcaatcc cggcctcggc
     1201 ctgatccccg gccgcgtcga ccgcatcccc gacacgaccg aggcgggcga gccccacccg
     1261 gtgccgcata tcagctgggg cgcgctgacg acgcctcccg gcgccagcgc cgacgcctgg
     1321 gccggcacgc cgctggagaa gctgagcccc ggccgctcga gcgtctattt cgtgcactcg
     1381 tatatgtgca acccgaccga ccagcacgcg ctgctcgcca ccgtcgacta tgacggccgc
     1441 ccgctcacgg cggcgatccg caaggacaac atcaccggcg tgcagttcca tcccgagcgc
     1501 agcggcatgg ccgggcagaa ggtgctggca gccttcct
//
LOCUS       DATAIQ010000552         2688 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_443656, whole genome shotgun sequence.
ACCESSION   DATAIQ010000552 DATAIQ010000000
VERSION     DATAIQ010000552.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2688)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2688)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2688
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_443656"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..605)
                     /locus_tag="VHN20_09170"
     CDS             complement(<1..605)
                     /locus_tag="VHN20_09170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018012853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phytanoyl-CoA dioxygenase family protein"
                     /protein_id="HEX2725975.1"
                     /translation="MARRDATGSDIDQDVDTLYRDGIVGRKGAFSRQWAEGMREDMMT
                     AFWEAIQRPGGAVGRGPRRWYVEIHPQALRGFVELVTHPWVESMCAAVLGPDYEIVEI
                     GFDTPFQGARRQPWHRDFPSPRDSYEDRRITSLAFNLTGVDVTPDMGPFEVAPGTQWD
                     DGREWKYEMFPPEEIWPRFAERGVRKYPQMGDISCRSALTV"
     gene            complement(806..1225)
                     /locus_tag="VHN20_09175"
     CDS             complement(806..1225)
                     /locus_tag="VHN20_09175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725976.1"
                     /translation="MSSRLMPAAGATLYLLLAGASLASPCADRINALEARVTEAAEAT
                     ASVSSGGQGVAAARESQAMQARNHGEPITPPTVPPFQNEAKEAQITRQAADIGGGGDR
                     VMQARAKLNEARTLDGRGDSTACLDMVTQAERQLSSR"
     gene            complement(1336..>2688)
                     /locus_tag="VHN20_09180"
     CDS             complement(1336..>2688)
                     /locus_tag="VHN20_09180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015932946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEX2725977.1"
                     /translation="DTYRARLSEAASKPAKVVRNEGDVERAMAGAAKRVAAEYYIPHL
                     AQSTLEPPAALVRIVDGAAEAWACTQAPQVTRARLAKRLGLPVEKVKVNVTLLGGGFG
                     RKSKPDFVVEAGLCSQAMDGAPVKVTWTREDDLHHGYYHTVSVERLEAGLDASGKPVA
                     WLHRSAAPTIGSIFAPDPKHELPFELGMGFVNTPFAIPNIRAENPEAPAHVRIGWYRS
                     VSNIPHAFAIQSFVAELAEAAGRDPKDYLLDVIGPPRIIDPTKIGDVWNHGEDPDRYP
                     IDTGRLRRVIETAAEGIGWGRTLPKGSGLGIAGHYSFVSYIAVAAEVAVGDGGRLTIP
                     RVDIAIDCGPMVNPDRVRSQMEGAVIMGAGLATSAEISFRNGRAEQNNFDTYELTRMD
                     SAPREIRVHLLPSTDYSRPLGGVGEPGLPPVAPAIANAVFAATGKRIRQLPIRDQLST
                     "
BASE COUNT          378 a          929 c          938 g          443 t
ORIGIN      
        1 tggaccgtta gggccgagcg gcacgagatg tcgcccatct gcggatactt gcgcacgccg
       61 cgctcggcga agcgcggcca gatctcttcg ggtgggaaca tctcgtattt ccactcgcgc
      121 ccgtcatccc attgcgtccc cggcgcgacc tcgaacggcc ccatgtcggg ggtgacgtcg
      181 accccggtga ggttgaaggc gagcgaggtg atgcgccggt cctcgtagct gtcgcgcggc
      241 gacgggaagt cgcggtgcca cggctgccgc ctggcgccct ggaacggcgt gtcgaagccg
      301 atctccacga tctcgtaatc cggcccgagc acggccgcgc acatgctttc cacccatgga
      361 tgggtcacca gctcgacgaa accgcgcaac gcctggggat ggatctccac ataccagcgc
      421 cgtgggccgc ggccgaccgc accgccgggc cgctggatcg cctcccagaa cgccgtcatc
      481 atgtcctcgc gcatgccctc ggcccattgg cgcgagaagg cgcctttgcg gccgacgatg
      541 ccgtcgcgat agagcgtgtc gacgtcctgg tcgatgtcgg aacccgtcgc gtcgcgacgg
      601 gccatggctt gagcttgccc tgctgtcaca agtcgatccc ccgcttcgct ccacacggga
      661 gcccacaccg gtctcgctct gatttgcggc gaatatgggt gagcttggcc gcgcgtcgca
      721 gccggccgtt tcccggacca gcgccgatgc gggagagagg catgcgcctc gaagccggcg
      781 ctgatgccag atgttctaag cgactctagc gcgaactgag ctgccgttcg gcctgcgtga
      841 ccatgtcgag gcaggcggtg ctgtccccgc ggccatcgag ggttcgcgcc tcgttcagct
      901 ttgcgcgcgc ctgcatcacc cggtcgccgc cgccaccgat gtcggccgcc tgccgggtga
      961 tttgcgcctc cttggcctcg ttctggaacg gcggcaccgt cggaggcgtg attggttcgc
     1021 cgtggttgcg ggcctgcatg gcctggctct cgcgcgccgc ggcaacgccc tggccgcccg
     1081 aggagaccga ggcggttgct tccgccgcct ccgtcacgcg cgcttcgagg gcattgatgc
     1141 ggtcggcgca aggcgacgcc agggaagcgc cggcaaggag caggtagagc gtcgcgccgg
     1201 ccgcaggcat caggcgagag gacatgaagc cgcctccatc tcgagatgtc agaccaatcc
     1261 gcgatcgcct cgtgcggttc caaacccgcc ggtgggtcca ccgcatcgcg gacagggcca
     1321 ctggccgacg gttgctcacg tgctcagctg gtcgcggatc ggcagctgcc ggatgcgctt
     1381 gcctgtcgcg gcgaacaccg cattggcgat ggccggcgcc accggcggca ggccgggctc
     1441 gccgaccccg ccgagcggcc ggctgtagtc ggtcgagggc aggagatgca cccggatctc
     1501 gcgcggcgcg gagtccattc gcgtgagttc gtaggtgtcg aagttgttct gctccgcgcg
     1561 cccgttccgg aacgatatct cggccgaggt ggcaagcccg gcgcccatga tgacggcgcc
     1621 ttccatctgc gagcgcaccc ggtccgggtt gaccatcggt ccgcaatcga tggcgatgtc
     1681 gacgcgcggg atcgtgagcc tgccgccgtc gccgaccgcc acctccgccg ccaccgcgat
     1741 gtagctgacg aagctgtagt ggccggcgat gccgaggccg cttcccttgg gcaaggtccg
     1801 gccccagccg atgccctcgg ccgcggtctc gatcacgcgc cggaggcggc cggtgtcgat
     1861 cgggtagcgg tccggatcct cgccgtggtt ccagacgtcg ccgatcttcg tcgggtcgat
     1921 gatgcgaggc gggccgatca cgtcgaggag atagtccttc gggtcgcggc ccgcagcctc
     1981 ggcgagctcg gccacgaagg actggatggc gaaggcgtgc ggaatgttcg acaccgatcg
     2041 gtaccagccg atgcggacat gcgccggcgc ttccggattc tcggccctga tgttcgggat
     2101 cgcgaacggc gtgttgacga accccatccc gagctcgaag ggcagctcgt gcttcgggtc
     2161 cggcgcaaag atcgagccga tcgtcggggc tgcgctgcga tgcagccagg ccaccggctt
     2221 gccggaggcg tcgagccccg cctcgaggcg ctcgacggag accgtatgat aatagccgtg
     2281 atgcaggtcg tcctcgcgtg tccaggtgac cttgacgggc gcgccatcca tggcttgcga
     2341 gcacaggccc gcctccacga cgaagtcggg cttggatttt cggccgaagc cgccgccgag
     2401 cagggtgacg ttgaccttca ccttctcgac cggcaggccg agccgcttgg caaggcgcgc
     2461 gcgggtcacc tgcggcgcct gcgtgcacgc ccaggcctcg gccgcgccgt cgacgatgcg
     2521 cacgagcgct gcgggcggct cgagggtcga ttgcgcgaga tgcggaatgt agtattccgc
     2581 cgcgacgcgc ttcgccgcgc cggccatggc gcgctcgacg tcgccctcgt tgcggacgac
     2641 cttggcgggc ttgctcgccg cctcgctcag ccgcgcgcgg taggtatc
//
LOCUS       DATAIQ010000553         2176 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_443735, whole genome shotgun sequence.
ACCESSION   DATAIQ010000553 DATAIQ010000000
VERSION     DATAIQ010000553.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2176)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2176)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2176
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_443735"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..763)
                     /locus_tag="VHN20_09185"
     CDS             complement(<1..763)
                     /locus_tag="VHN20_09185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacid dehydrogenase"
                     /protein_id="HEX2725978.1"
                     /translation="MTTPRVLISDALSPAAVQIFKDRGVEVDFQPDLGKDKDKLAKII
                     ANYDGLAIRSATKVTAKILEDAKNLKVIGRAGIGVDNVDIPAATAKGVIVMNTPFGNS
                     ITTAEHAIAMMFALAREIPQADASTQAGKWEKNRFMGVEITGKTLGVIGCGNIGSIVV
                     DRAHGLKMKVVAYDPYLSPERAVDLGVEKVEIEELLRRADFITLHTPLTERTRNLIDA
                     RALALTKPDVRIVNCARGGLVDEVALRAALDEGRVA"
     gene            complement(1012..2175)
                     /locus_tag="VHN20_09190"
     CDS             complement(1012..2175)
                     /locus_tag="VHN20_09190"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004648 -
                     O-phospho-L-serine:2-oxoglutarate aminotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine transaminase"
                     /protein_id="HEX2725979.1"
                     /translation="MPAARPRAPFFSSGPCAKRPGWSPEILKNAPLGRSHRAKAGKSR
                     LKRAIDLTRELLEVPADYRIGIVPASDTGAVEMALWSMLGARGVDMLAWESFGEGWVT
                     DVVKQLKLKDARVIKAAYGELPDLSQVDAKARDVVFTWNGTTSGVRVANADWIAADRE
                     GLTICDATSAAFAQALDWPKLDVVTFSWQKVLGGEAAHGMLILSPRAVERLQTYTPAW
                     PLPKIFRLTRGGKLIEGIFEGETINTPSMLCVEDYVDALEWAKSLGGLKGLIARADQN
                     AKVIAHWVATAPWIANLAKDPATASNTSVCLSIVDPDVVAQGPDAVAAVAKGIAASLE
                     KEGVAYDIGAYRDAPPGLRIWCGATVEAADLEALTPWLDWAFAQEKAKLAKAA"
BASE COUNT          318 a          702 c          777 g          379 t
ORIGIN      
        1 cggccacgcg gccctcgtcg agcgccgcgc ggagcgcgac ctcgtcgacc agcccgccgc
       61 gcgcgcagtt cacgatgcgc acgtccggct tggtcagcgc gagcgcgcgc gcatcgatga
      121 ggttgcgtgt gcgctcggtc agcggcgtgt ggagcgtgat gaagtcggca cggcgcagca
      181 gttcctcgat ctcgaccttt tcgaccccga ggtcgacggc gcgttcgggc gagagatacg
      241 ggtcgtaagc gacgaccttc atcttgagcc catgcgcgcg gtccaccacg attgacccga
      301 tgttgccgca gccgatcacg cccagcgtct tgccggtgat ctcgacgccc atgaagcggt
      361 tcttctccca cttgccggcc tgcgtggacg cgtcggcctg cgggatctcg cgcgccaggg
      421 cgaacatcat ggcgatcgca tgctcggcgg tcgtgatgga gttgccgaac ggcgtgttca
      481 tcacgatgac gcccttggcc gtggcggccg gaatgtcgac gttgtcgacg ccgatgccgg
      541 cgcggccgat caccttcagg ttcttggcgt cttcgaggat cttggccgtg actttcgtcg
      601 ccgagcgaat ggcgaggccg tcatagttgg cgatgatctt ggcgagcttg tccttgtcct
      661 tgccgagatc cggctggaag tcgacctcga cgccgcgatc cttgaagatc tgcacggccg
      721 ccggggacag ggcatcggaa atgagaacgc ggggagtggt catgtttggc tacctatttc
      781 ccctccccct tgcggggagg ggttaggggt gggggtggcg ccgcctagtg agcgggtgcc
      841 ggctgcgatg gcgcggcttc cataaagggg atgccaaaag agggaagagg tcgcgctctc
      901 ggccaacgac ccccaccctg ccctccccgc aagcaagtcg ggtgttcccg acttgcctgc
      961 atcttatgcg gatctcgggc gagcccgaga tccgtgggga gggaaaagtt gttacgccgc
     1021 cttggcgagc ttggccttct cttgcgcgaa ggcccagtcg agccacggcg tgagagcctc
     1081 gaggtctgcg gcttcgacgg tcgccccgca ccagatgcgc aggcccggcg gcgcgtcgcg
     1141 gtaggcgccg atgtcgtagg cgacgccctc cttctcgagg ctcgcggcga tgcccttggc
     1201 gacggcggcg accgcatccg gcccttgcgc cacgacgtcg ggatcgacga tcgacaggca
     1261 cacgctggtg ttcgacgcgg tggccgggtc cttggcgaga tttgcgatcc acggcgccgt
     1321 cgcgacccag tgcgcgatca ccttggcgtt ctggtcggcc ctggcgatca ggcccttgag
     1381 gccgccgagc gacttcgccc attcgagcgc atcgacgtaa tcctcgacgc acagcatcga
     1441 cggcgtgttg atggtttcgc cctcgaagat gccttcgatc agcttgccgc cgcgggtgag
     1501 gcggaagatc ttcggcagcg gccacgccgg cgtgtaggtc tgcaggcgct cgacggcgcg
     1561 cggcgacagg atcagcatgc cgtgcgcggc ttcgccgccc agcaccttct gccaggagaa
     1621 ggtgacgaca tcgagcttcg gccaatcgag ggcctgcgcg aaggcggccg aggtggcgtc
     1681 gcagatcgtg agcccctcgc ggtcggcggc gatccagtcg gcattggcga cgcgcacgcc
     1741 cgaggtggtg ccgttccagg tgaacaccac gtcgcgggcc ttggcgtcga cctgggacag
     1801 gtcgggcagt tcgccgtaag cggccttgat gacgcgggcg tccttgagct tgagctgctt
     1861 gacgacgtcc gtgacccagc cttcgccgaa gctttcccag gccagcatgt cgacgccgcg
     1921 cgcgccgagc atcgaccaca gcgccatctc gacggcgccg gtatcggagg cggggacgat
     1981 gccgatgcgg taatcggccg ggacctcgag cagctcgcgc gtcaggtcga tggcgcgctt
     2041 gaggcgcgac ttgccggcct tggcgcggtg cgagcgcccg agcggtgcat tcttgaggat
     2101 ttcggggctc cagccggggc gcttggcgca ggggccggac gaaaaaaacg gcgcgcgcgg
     2161 gcgcgcggcg ggtatc
//
LOCUS       DATAIQ010000554         2907 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_244020, whole genome shotgun sequence.
ACCESSION   DATAIQ010000554 DATAIQ010000000
VERSION     DATAIQ010000554.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2907)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2907)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2907
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_244020"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..672)
                     /locus_tag="VHN20_09195"
     CDS             complement(<1..672)
                     /locus_tag="VHN20_09195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725980.1"
                     /translation="MIFRQLSLRRQVSVIGIAISVAIALSVPLLEAVRIHGEQQRAVV
                     VRARNIAHALAGQATDEGRLQTERLRLSEIIRPKDVGGGQSHRVLDMDGAVLVEGGRA
                     RRWPVLRARAPIQVRGETVGVVEVVAGLRPFLRQIGFAAVAGILLGLAAFFAACVLPL
                     RIVDRKLRAMALVMAQQASTRAVLPSEALATLGREIRRPVRSAAGTASLLLATELSPE
                     QRRHVE"
     gene            complement(901..2253)
                     /locus_tag="VHN20_09200"
     CDS             complement(901..2253)
                     /locus_tag="VHN20_09200"
                     /inference="COORDINATES: protein motif:HMM:TIGR03808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03808 family TAT-translocated repetitive
                     protein"
                     /protein_id="HEX2725981.1"
                     /translation="MTRALDHTRRAIVGAGLAAAAGVPPAFAQGASPARGELLTGLRR
                     DSEEDQTALVQRAVAAAARSGLPVNLPPGRYRIGGLSLPAGTRLAGAGPSATTLVQAG
                     NQPVVVARGGERITLEDIGVEGSAAADRAIPLVSLSDASELRMLDMKIAKARGTAVRL
                     ERCGGRIERCAVTEADVGIFSLDARGLQMVGNIVEQCANNGIQIWRSQKGYDGTQVLG
                     NRISQVRAQGGGSGQNGNGINVFRAGGVMVAQNVIRDCAFTAVRNNSGDNVQIIGNAC
                     SNLGEVAIYAEFAFEGCVINNNVVDRAAMGISITNFNENGRLAVASGNILRNLFRRPD
                     ALSGEINRGVGIGVEADAAVTGNVVEAAEFAGIVIGYGAYLRDVLCSSNVVRHCGYGV
                     AVSVASGAGAAQIVNNILSECRRGRIVGFDREKPISEELAQGATRRFAHLTIQGNTGQ
                     "
     gene            complement(2301..>2907)
                     /locus_tag="VHN20_09205"
     CDS             complement(2301..>2907)
                     /locus_tag="VHN20_09205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEX2725982.1"
                     /translation="TLFPIGGVMRANLFAYCGPRDPWLAGFRETPRDAVLASLPGIGN
                     LTGPFEVVGDVKIRPADLYVSKGKRRAGVVLVGDAFATSCPAAGTGLNKVFTDVERLC
                     RVHVPRWLATPGMGGDKIATFYDDPVKRACDAHSLNKAYFLRSLSTSLALPWRIRRWG
                     RSVGHIGAAVFRQTRDRLPLKTLHRDAGDRSPDPAAPGNPF"
BASE COUNT          456 a         1018 c         1001 g          432 t
ORIGIN      
        1 ttccacgtga cggcgctgct cgggtgagag ttccgtcgcg aggagcaggg acgccgtgcc
       61 ggcggcgctg cggaccggcc tgcggatctc gcggccgagc gtggcgagcg cttcgctcgg
      121 gagcactgcc ctggttgagg cctgctgcgc cataaccagc gccatcgccc tgagcttgcg
      181 gtccacgatg cgcagcggca gcacgcaggc cgcgaagaaa gccgccaggc caagcaggat
      241 gccggcgacg gcggcaaagc cgatctggcg gaggaatggc ctcaggccgg cgacgacctc
      301 gaccacaccg acggtctctc cgcggacctg gatgggcgcg cgagccctca ggacgggcca
      361 acgacgcgcc cgacctccct cgaccagcac ggctccatcc atgtcgagga cgcgatggct
      421 ctggcctccg ccgacgtcct tcggccggat gatctcggac aggcgcagcc gctcggtctg
      481 gaggcgcccc tcgtccgtgg cctgccccgc gagggcatgc gcgatgttgc gcgccctcac
      541 gacgacagcg cgctgctgct cgccatgaat ccggacggcc tcgaggagcg gcacggacaa
      601 ggcgatcgcg accgatatgg cgatcccgat cacgctcacc tggcggcgca aggagagctg
      661 ccggaagatc atgggcgcgc tgctttgccg gcccgacgaa gccggacgcg cggagaagcc
      721 ttgcctcctc cggaaaaacg cgtgctcggc ttcacgacca acttgcccca gtgctcgaca
      781 aaacacgggg gaaattggtg cacgaatatg cctaatttgc tgtaaagacc cgggtggagc
      841 gccggccgcg gggcgaggct ctcgcgcgcc gcacaggatc aaaggatgcg gcgcgcgccg
      901 ctactgcccc gtgttgccct ggatcgtcag atgcgcgaag cgccgggtcg caccctgcgc
      961 caactcttcg gatatgggct tctcgcggtc gaagccgacg atcctgccgc gccggcactc
     1021 ggacaggatg ttgttgacga tctgggccgc gccggcgcct gacgcgacgc tcacggcgac
     1081 gccgtagccg cagtgccgca cgacgttgct cgagcagagc acgtcgcgca gataggcgcc
     1141 gtagccgatc acgatgccgg caaactcggc cgcttccacc acgttgccgg tgaccgccgc
     1201 gtcggcctcg acgccgatgc cgacgccgcg attgatctcg ccgctcaacg catccggccg
     1261 acggaacagg ttgcgcagga tattgcccga cgcaacggcg agccgcccgt tctcgttgaa
     1321 gttcgtgatc gagatgccca tggccgcccg gtcgacgaca ttgttgttga tcacgcagcc
     1381 ctcgaacgca aactcggcat agatggcgac ctcgccgagg ttgctgcatg cattgccgat
     1441 gatctgtacg ttgtcgccgg aattgttgcg gaccgcggtg aaggcgcagt cgcggatcac
     1501 gttttgcgcc accatcacgc cgcccgcgcg gaagacgttg atgccgttgc cgttctggcc
     1561 ggagccgccg ccctgggccc gcacctggct gatgcggttt ccgagcacct gggtgccgtc
     1621 gtaacctttt tgcgagcgcc agatctggat gccgttgttg gcgcattgct cgacgatgtt
     1681 gccgaccatc tgcaggccgc gcgcgtcgag gctgaagatg ccgacatcgg cctcggtgac
     1741 cgcgcatcgc tcgatacgcc cgccgcaccg ctccagccgg acggccgtgc cgcgcgcctt
     1801 tgcgatcttc atgtcgagca tgcgcagctc gctcgcgtcc gacagcgaca ccagcggtat
     1861 cgcgcgatcg gcggcggcgc tgccctcgac cccgatatct tcgagcgtga tgcgctcgcc
     1921 gccgcgggca acgacgaccg gctggttgcc ggcctgaacg agtgtcgtcg cggacgggcc
     1981 tgcgccagcg agccgcgtgc ccgcagggag cgagaggccg ccgatcctgt agcgcccggg
     2041 tggcaggttg accggcagcc cgctccgcgc ggccgcggct acggcccgtt gcacgagcgc
     2101 cgtctggtcc tcctcgctgt cgcgccgcaa gccggtgagc agctcgccgc gggccgggct
     2161 cgcgccttgc gcgaaggccg gaggcacgcc ggcggccgcc gccaggccgg ctccgacgat
     2221 cgcccgtcgc gtgtgatcga gagcgcgtgt catatcctgc cccttgccgc gcgcccaaag
     2281 ctacatgagc gcaccggacc tcaaaacgga ttgcccgggg cggccgggtc cgggctgcgg
     2341 tcgccagcgt cccggtgcag cgtcttgagg ggcagccggt cccgcgtctg ccggaatacg
     2401 gcggcgccga tgtggccgac ggacctgccc caccgccgaa ttcgccacgg gagagccagg
     2461 ctcgtcgaga gcgagcgcag gaaataggcc ttgttcaacg agtgggcgtc gcaggcacgc
     2521 ttgacgggat cgtcgtagaa cgtggcgatc ttgtccccgc ccatgcccgg ggttgcgagc
     2581 cagcgcggga catggacgcg gcacaggcgc tcgacgtccg tgaacacctt gttgaggccg
     2641 gtccccgcgg cgggacacga ggtggcaaag gcatcgccga ccagcacgac accggcccgg
     2701 cgcttgccct tgctgacata aaggtcggcc gggcggatct tgacgtcgcc gaccacctcg
     2761 aacggcccgg tcaggttgcc gatcccgggc aggctcgcca gcacggcgtc gcgcggcgtc
     2821 tcgcggaatc ccgcgagcca tggatcgcgg gggccgcaat acgcaaacag gttggcgcgc
     2881 atcacaccgc cgatcgggaa aagcgtc
//
LOCUS       DATAIQ010000555         1689 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_244048, whole genome shotgun sequence.
ACCESSION   DATAIQ010000555 DATAIQ010000000
VERSION     DATAIQ010000555.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1689)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1689)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1689
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_244048"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..496
                     /locus_tag="VHN20_09210"
     CDS             <1..496
                     /locus_tag="VHN20_09210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="LamB/YcsF family protein"
                     /protein_id="HEX2725983.1"
                     /translation="QIGALQAVAALARHRVSYVKAHGTLNTMANEDEDLALGIARGIK
                     GVDPALANVCMPGLAMERISERSGIRVVREVYADRTYEDNGNLTSRKKPGAVLYDAKI
                     ASERILRMVQDGAITTVTGKRIPVAIDTICVHGDEPTAVAMARMVRATLEANGVTVTP
                     FAPA"
     gene            618..1304
                     /locus_tag="VHN20_09215"
     CDS             618..1304
                     /locus_tag="VHN20_09215"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HEX2725984.1"
                     /translation="MRFPLNFVPAQTWHAGALRFGANRSGGRRKHAGCDLYAPIGTPV
                     FAVANGTVKSFGAFYLGTFQLTIDHGDFWVRYGEISSNIASRLPIGGQVNEGDQIGEV
                     GDLQGLDLAMVHFEMYSGAASGPLTVPTRAPFMRRADLIDPTPHLDAWANVANAPTHP
                     RLQRGSQGAAVMEWQRRLLNQGYAMTTDGDFGPATETATKLFQAESDLTADGIVGRAT
                     YAAMVEAEKD"
     gene            complement(1301..>1689)
                     /locus_tag="VHN20_09220"
     CDS             complement(1301..>1689)
                     /locus_tag="VHN20_09220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015930675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF4112 domain-containing protein"
                     /protein_id="HEX2725985.1"
                     /translation="PSRADSVARLELLSRLLDSAFLIPGTNQRVGLDAIIGLIPGVGD
                     LVSTALSSYIIWEARQLGLPRWKIARMVGNVAADTVLGAIPFAGDVFDVFFRANRRNM
                     RIVREHLERTGALPATIEAQAVRVDG"
BASE COUNT          300 a          550 c          576 g          263 t
ORIGIN      
        1 ccagatcggc gcgctgcagg cggtcgcggc gctcgcccgg caccgggtca gttacgtgaa
       61 ggcgcacggc acgctcaaca ccatggccaa tgaggacgag gatctggcgc tcggcatcgc
      121 gcgcggcatc aagggcgtcg atccggcgct cgccaatgtc tgcatgcccg gcctcgccat
      181 ggagcgcatc tcggaacggt cggggatacg cgtcgtgcgc gaggtctatg ccgaccgcac
      241 ctacgaggac aacggcaacc tgaccagccg caagaaaccc ggcgcggtgc tgtacgatgc
      301 gaaaatcgcg tccgagcgca tcctgcgcat ggtgcaggac ggcgccatca ccacggtgac
      361 tggcaagcgc attccggttg cgatcgatac gatctgcgtg cacggcgacg agccgaccgc
      421 ggtcgcgatg gcgcgcatgg tgcgggcgac gcttgaggcg aacggcgtca cggtgacgcc
      481 gttcgcgccg gcgtgacgtc acccaaataa gtccagtcat cgcgaatttg cgtggccacc
      541 tggcgtgtga acgcattcac atgatgaaat cgcgctcccg gctaggttgc agctgcggcc
      601 taccgggagg gttacccatg cgctttccac tgaatttcgt tccggctcaa acctggcatg
      661 cgggcgcctt gcgcttcggc gcgaaccgct ccggcggaag acgcaagcac gccggctgcg
      721 atctttacgc gccgatcgga acgcccgttt tcgcggtcgc gaacgggacg gtgaagtcgt
      781 tcggggcctt ttacctcgga acgtttcagc tcacgatcga ccacggagat ttctgggttc
      841 gctacgggga gatctcgtcg aacatcgcgt cgcgactacc catcggcggt caggtcaatg
      901 aaggcgatca gatcggcgag gtaggcgatc tgcaaggcct cgatctggcg atggtgcatt
      961 tcgagatgta ttccggcgca gcgtccggcc cgctgaccgt tccgacgcgc gcgcccttca
     1021 tgcgccgcgc ggacctgatc gacccgacgc cccacctcga cgcgtgggcc aatgtcgcca
     1081 atgctccgac gcatccgagg cttcaacgcg gcagccaggg ggccgccgtg atggaatggc
     1141 agcggcgcct cctgaaccag ggctacgcga tgaccaccga tggtgacttc gggccggcaa
     1201 ccgaaaccgc cacaaaactg ttccaagccg agtccgacct caccgccgac ggcatcgtcg
     1261 gccgggcgac ctatgccgcc atggtcgagg cggaaaaaga ctagccgtcg acgcggacgg
     1321 cctgggcctc gatcgtcgcc ggcagcgcgc cggtgcgttc gagatgctcg cgcacgatgc
     1381 gcatgttgcg ccggttggcg cggaagaaca cgtcgaagac gtcgcccgcg aatgggatcg
     1441 cgccgagcac ggtgtcggcc gcgacgttgc cgaccatgcg ggcgatcttc cagcgcggca
     1501 ggccgagctg gcgcgcctcc cagatgatgt agctggacaa ggccgtcgag acgaggtcgc
     1561 cgacgccggg gatcaggccg atgatggcgt cgaggccgac ccgttggttg gtgcccggga
     1621 tcaggaaggc gctgtcgagc aggcgcgaca acagctcgag acgggcgacc gaatcggccc
     1681 ggctcgggc
//
LOCUS       DATAIQ010000556         3068 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_398072, whole genome shotgun sequence.
ACCESSION   DATAIQ010000556 DATAIQ010000000
VERSION     DATAIQ010000556.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3068)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3068)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3068
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_398072"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(354..698)
                     /locus_tag="VHN20_09225"
     CDS             complement(354..698)
                     /locus_tag="VHN20_09225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725986.1"
                     /translation="MRQGPEDINTAKWRRALVPLDLSRRERDKAEVLALSSALLTLTA
                     RSNTTNAAVVSAVATMTFLVLLCVALWSWMYVGPEPVTSGELKQEPAIQSEGIALERD
                     RSRSPRSDSDSL"
     gene            complement(906..1955)
                     /locus_tag="VHN20_09230"
     CDS             complement(906..1955)
                     /locus_tag="VHN20_09230"
                     /inference="COORDINATES: protein motif:HMM:TIGR01414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HEX2725987.1"
                     /translation="MSAVSGRVSPERALRAHVSLIAAAILSLAPMAAAASDARLGKAS
                     SVLLDIIDSRLDKARSGPVPESRSAAPGAQAARAWSTGYGYGSRTGAGAGGATVRGKG
                     GGGAAGIEHAVDPTLVVGIAAGVARERSSGNGLRSDMSTVSTGAYVAWSPFDGWELDG
                     FLGNHWVEIETTRGHDGAAAPFRGDARAPGISGLAGAGYRLRSATSMGEGFVKPFVSL
                     AYVSHDRRGYTDSGPSGPRLEFPSKTYERTAGNIGLAAGVDVNAGGGWTVRPEMRVAW
                     SHYISNPTSAVPAFLWGAPAIIRDPEPGRDGAVIDVELTGWKHADLQLFAGYTGEFRS
                     NEALHQGRAGVRLNW"
     gene            complement(2138..2584)
                     /locus_tag="VHN20_09235"
     CDS             complement(2138..2584)
                     /locus_tag="VHN20_09235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725988.1"
                     /translation="MCGDLEEEQRGEEQLYGRFRLHARELLRGRGTADAPPTAKDLNA
                     YMDRLFADALARCARDGEQAADGDAYRLLAAQPLVFARLAGFLAAHVSLQEDPLRKVM
                     EALMHGYAEAEHIEPDHHGHDHDHDHDDHHDHHHHGHAHHHGHEHH"
     gene            2781..>3068
                     /locus_tag="VHN20_09240"
     CDS             2781..>3068
                     /locus_tag="VHN20_09240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725989.1"
                     /translation="MAKVSRLEERLSAGRTGLVLFDALHGYLHPSDPQKVRFLEERRI
                     LANLQNLLAGARRVGMTTFYPAGAHAPDGSDTVARLTDTDMDLKPGGGAEKP"
BASE COUNT          544 a          999 c         1024 g          501 t
ORIGIN      
        1 ggccctgacg gctgtcgcgg cgaatgtcct aacgagcggt aaattgtccg atgcgaagct
       61 tgtgccgttc tgactgcaac tccagggcaa ccacctcacg cgaggcccga tgacggagcg
      121 gcgatgccaa ggcgaagccg cgcacggtca cgatcgaggg tctcgggtcc atggctcgcc
      181 tggaaggcat cgcgcatgtc gtggtccacg gagagtcctc ctcgtgagcg atgaaggcga
      241 ccgctcagac ggcaaccctt cggagattgc cctcatcgcc tatgagcggc tgcgcatcgc
      301 ccgttaatgc atgatccggc gaagtggaca ccagttcgcc ggaagcgaag gattcagagg
      361 gaatcggagt cggatcgcgg cgatctcgaa cgatcccgct cgagagcaat gccttccgat
      421 tgaattgcgg gctcttgctt cagctcgccg ctcgtgaccg gttcgggccc gacgtacatc
      481 caggaccaca gcgcgacgca aagcagcacc agaaaggtca tcgtcgcgac ggcggaaaca
      541 acggcggcgt tggtggtgtt cgaacgcgcc gtcaaagtga ggagggcgct cgatagggcc
      601 aggacctctg ccttgtcccg ttcccgtctc gacaggtcga ggggaaccag cgccctccgc
      661 cactttgccg tgttgatgtc ttcagggccc tgacgcatta caattccgtg cccatgaacg
      721 cttgggtgcg ctaacccgtt gcgctccatc cacaaatttg tggatacctg acgaggcccg
      781 acttgacaag ggtcgcgtgc cagagggagg cctgattcgg agtcgcagcg cgtgcgccaa
      841 tagcgccgaa ccgcatggat gccgaaccgc tggacagtga atcgctcaac ccgcaatcgg
      901 gcgcgtcacc agttcagacg cacgccggcg cggccctgat gcaaagcctc attggaacgg
      961 aactcaccag tgtagccggc aaacagctgc aggtcggcgt gcttccagcc ggtgagctcg
     1021 acgtcgatca cggcgccgtc gcggccgggc tcaggatcgc ggatgatggc gggagcgccc
     1081 cacaagaatg caggcacggc cgaggttggg ttcgagatgt aatgcgacca ggccacgcgc
     1141 atctcgggcc ggacggtcca gcctccgccg gcgttcacgt cgacgccggc ggcaagcccg
     1201 atatttccgg ccgtgcgctc gtacgttttt gatgggaatt cgaggcgcgg gcctgatggc
     1261 ccactgtccg tgtagccgcg ccggtcatga ctgacataag ccagggacac gaagggcttt
     1321 acgaagccct cgcccatcga ggttgccgag cggagccggt agccggcgcc ggccagcccg
     1381 ctgatgcccg gggctcgcgc atcgccccgg aacggcgcgg ccgcgccgtc gtggccacgc
     1441 gtggtctcga tctcgaccca gtggttgccc aggaacccgt ccaactccca gccgtcaaag
     1501 ggcgaccacg cgacataggc gccggtcgag acggtgctca tgtcgctgcg caagccattg
     1561 cccgagcttc gctcgcgcgc gacgcccgcc gcgatgccga ccacgagcgt cggatcgacg
     1621 gcgtgctcga tgcctgccgc gccgccgccg cccttgcccc tgacggtggc gccgcccgcg
     1681 ccggctcccg tgcgggagcc atagccgtaa ccggtgctcc atgcccgcgc cgcctgcgcc
     1741 ccgggggccg cgctccgcga ctcggggacc ggaccgctgc gggccttgtc aagccgggaa
     1801 tcaatgatgt cgaggaggac ggacgaagct ttgccgagcc ttgcgtcgga agcggccgca
     1861 gccatcggcg ccagcgacag gatggccgcg gcgataaggg agacgtgcgc gcgcagggcg
     1921 cgctccggag aaacgcgccc ggagactgcc gacatcgttg actcgcgatc aacactcctc
     1981 agccctcgcg aatccagagg ttcgccagag ccaagcgtct ccaggagtaa cgactttatg
     2041 gttagagaac ggttaaacgc cggcgcgaag tcaactcaca cgtgtgacgc cggggtgcac
     2101 gcggccggcg gctcgtatcc acttcgccgg cccatgctca gtggtgctcg tgaccgtgat
     2161 ggtgcgcgtg gccatgatgg tgatggtcat gatgatcatc atggtcatgg tcatggtcat
     2221 ggccgtgatg atccggctcg atgtgctcgg cttcggcata gccgtgcatc agtgcttcca
     2281 tgaccttgcg caagggatct tcctgcagcg agacatgcgc cgcgagaaac cccgcgagac
     2341 gcgcgaacac gaggggttgc gcggcgagca gccggtaggc gtcgccgtcc gctgcctgct
     2401 cgccgtcgcg cgcgcagcgc gccagggcgt cggcgaagag ccggtccatg taggcgttca
     2461 ggtccttggc ggtagggggc gcatcagccg tgccgcgacc gcgcagcagt tcgcgcgcat
     2521 gcagccggaa acggccgtaa agctgctcct cgccccgctg ttcctcttcg agatcaccac
     2581 acattgcgtc ctccgtgggc cgcgcccaaa gcgtcaccgg ctttttatcg agaccatggc
     2641 cgcagccgca agctccggcg cgagccccgc gtgacgctcg acgggttcaa ccgccgaggc
     2701 gattgtccta tacggaagcg gcgataagcg tcgttaatga cggattccac ttgttaaccg
     2761 aagggttgag gggcagcttg atggcaaagg tttcacgtct agaggagcgc ctgagcgcgg
     2821 gccgcaccgg ccttgtgctg ttcgatgcgc tgcatggata tctacatccg agcgatccgc
     2881 agaaggtgcg attcctggag gagcgtcgga tcctggccaa cctgcagaat cttctggcgg
     2941 gcgccaggcg ggtcggcatg accacgttct atccggccgg cgcacatgcg cccgacgggt
     3001 ccgacacggt ggcacgcctc accgacacgg acatggacct gaagccgggc ggaggcgcgg
     3061 agaagccg
//
LOCUS       DATAIQ010000557         1835 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_121644, whole genome shotgun sequence.
ACCESSION   DATAIQ010000557 DATAIQ010000000
VERSION     DATAIQ010000557.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1835)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1835)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1835
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_121644"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            483..1469
                     /locus_tag="VHN20_09245"
     CDS             483..1469
                     /locus_tag="VHN20_09245"
                     /inference="COORDINATES: protein motif:HMM:NF012573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005509 - calcium ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HEX2725990.1"
                     /translation="MALILGTPFNDIRIGTPLSDIINGLAGDDFLDGRAGNDLLIGGL
                     GNDTLIGGLGDDRLDGGFGNDVLNGGLGNDVMLGGLGNDRLLGGFGNDVLNGGQGADH
                     MDGGVGNDTYFVDDTLDRIIERPNQGHDKVFSSLLITNLFFFSPNVEDLTLVGPGAAA
                     GLGNDLDNIITGNGIDNGLAGLLGQDTLFGGGGNDSLNGGADSDKLIGGAGADQLIGG
                     LDGDRFIFLSSADSPPPGLTRGDHILDFNRLEGDIVDLSAIDADTTVGGNQAFTFALA
                     PTLAPGRGELSYAVVGGQIFVQGNTDADAAVEIQFRVSGPGLAAMLASDFDL"
BASE COUNT          317 a          601 c          606 g          311 t
ORIGIN      
        1 gcaacgaacc gcatctccat gaacgatcct ccgggtggct cggcaccacg ccgagcatta
       61 cacaatcaag cccctcgcca ccgcaagggt ttcgtgcgcc ccctgcaacg aagcaccacc
      121 ccttgcggtg catggcgtgg cgatgcgggc ggaaatccgt gcgtcggggt ccctggcggg
      181 aagatgcggc agccgcggat tcggatcgga attccgtcgc gcggattcaa gctgtgcggc
      241 ctgtcacagc agacagaaag agtttcagac aaggtgggca agtattggac cgggttcgag
      301 cgtaaagctg cttggcgccg gcggtgcgtg tcggtttggc tgcggcacct ccgtccgaga
      361 agactgcaaa catgatgcag aacccgatca atgccccgcg gcggagcggc ctctcgggcg
      421 gcttggacgc cgtgggcggc tcaggcggca cctgaacggg ccgcttctgg gagggcctcg
      481 acatggcgct tatcctcgga acacctttca acgacatccg catcggcacg ccgctcagcg
      541 acatcatcaa tggattggcc ggcgatgatt tcctcgacgg gcgtgccggc aacgacctcc
      601 tgatcggagg cttgggcaac gacacattga tcggcggtct aggcgacgac cgcctcgacg
      661 gcggattcgg caacgatgtc ctcaacggcg gcctcggcaa cgacgtcatg ctcgggggtt
      721 tgggcaacga tcgcttgctg ggcggcttcg gcaacgatgt cctcaatggc ggccagggcg
      781 ccgatcacat ggacggcggg gtcggaaacg acacctactt cgtcgacgac acgctcgacc
      841 gcatcatcga gcgtccgaac cagggacatg acaaggtctt cagctcgctc ctgatcacga
      901 acctgttctt cttcagcccc aacgtcgaag acctgacgct cgtcggcccg ggcgccgcgg
      961 ccggcctcgg caacgacctc gacaacatca ttaccggcaa cggcatcgac aatggcttgg
     1021 cggggctgct cgggcaggac acgctgttcg gcggtggcgg caacgactcg ctcaacggcg
     1081 gtgccgacag cgacaagctg atcggcggcg ccggcgccga tcagctgatc ggcgggctgg
     1141 acggcgaccg cttcattttc ctctcgagcg ccgacagccc gccgccgggg ctgacccgcg
     1201 gggatcacat cctcgatttc aaccggctcg agggcgatat cgtcgacctg tccgcgatcg
     1261 atgccgacac gacggtcggc ggaaatcagg ccttcacctt cgcgctggcg ccgaccctcg
     1321 cccccgggcg gggcgaattg agctacgccg tggtcggcgg ccagattttc gtgcagggca
     1381 acacggatgc ggacgccgca gtcgagatcc agttccgcgt gtccggtccg ggccttgctg
     1441 cgatgctggc gagcgatttc gacctgtaat gaggcccgcc gagcgggcgt gaccagcggc
     1501 gtcaagccgc aagcgcagcg gaagagctga tcccggagcg cgccgggatc atgcgatgtg
     1561 aagagcgcgt gagagcggcc gggttcgcat cgagcccggc cgctctgcgt ttgtccttgg
     1621 gcgcgctcgc gccgaggcgc ggaatgcatg tttcgcgtca gatgtctgtg cgacccctca
     1681 cagccctcat cagactttgg tcgtaatatc cctgcgcatc tggattgggt ccgagcgcag
     1741 actgctcagg ggcccgcggc ggtttgcgcg actctagtgc ggcagttccg tccgtcggtc
     1801 cctggcccgc cataaacccg tccatgcccc gcagc
//
LOCUS       DATAIQ010000558         2421 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_121662, whole genome shotgun sequence.
ACCESSION   DATAIQ010000558 DATAIQ010000000
VERSION     DATAIQ010000558.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2421)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2421)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2421
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_121662"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1259)
                     /locus_tag="VHN20_09250"
     CDS             complement(<1..1259)
                     /locus_tag="VHN20_09250"
                     /EC_number="2.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013502347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045254 - pyruvate dehydrogenase complex
                     [Evidence IEA];
                     GO_function: GO:0004738 - pyruvate dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0004742 - dihydrolipoyllysine-residue
                     acetyltransferase activity [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase complex dihydrolipoamide
                     acetyltransferase"
                     /protein_id="HEX2725991.1"
                     /translation="MPINILMPALSPTMEKGNLAKWLKKEGDPIKSGDVIAEIETDKA
                     TMEVEAVDEGVLAKIVVPEGTADVPVNQLIALIAGEGEDPKSVSASGGAPAAKPAAAA
                     QAAPQAAQSQPAAAAQPAAQPTAGAGQAQAAPARAEAAKGNGAGRVFASPLARRIAKE
                     ASIDLSRVQGSGPHGRIVERDVRGAISGGTAKAAAPQPAAPLVARAPSDAQVKALFEA
                     GSYEEIPHDNMRRTIARRLTEARQTIPQFYLTVDCEIDALLAMREQANAAAPKDKDGK
                     PAYKISVNDMVIKALAVALTRVPDANVTWTEGAMLKHKHADVGVAVALPGHGLITPII
                     RKAESKTLSEIANAMKDFAVRAKGRKLKPEEYQGGTTAVSNLGMFGIKDFTAVINPPH
                     STILAVGGGEKRPVVKNGQLAVATVMSV"
     gene            complement(1383..>2421)
                     /locus_tag="VHN20_09255"
     CDS             complement(1383..>2421)
                     /locus_tag="VHN20_09255"
                     /EC_number="1.2.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008968863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004739 - pyruvate dehydrogenase
                     (acetyl-transferring) activity [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="pyruvate dehydrogenase complex E1 component
                     subunit beta"
                     /protein_id="HEX2725992.1"
                     /translation="AQPPRPETVAGPEVPEGTEMVTMTVREALRDAMAEEMRRDPDVF
                     VMGEEVAEYQGAYKVTQGLLQEFGARRVVDTPITEHGFAGLGVGAALTGLKPIVEFMT
                     WNFAMQAIDQIINSAAKTLYMSGGQMGAPIVFRGPNGAAARVGAQHSHDYAAWYSNVP
                     GLKVVAPYTAADAKGLLKAAIRDANPVIFLENEILYGQSFPVPKLDDFVLPIGKARVH
                     RQGKDVTIVSFGIGMTYALKAAEELAKEGIEAEVIDLRTIRPMDTATVVASVQKTGRC
                     ITVEEGFPQSGVGAEISARIMQEAFDYLDAPVTRITGKDVPMPYAANLEKLALPNVAE
                     IVQAAKAVSYR"
BASE COUNT          308 a          836 c          836 g          441 t
ORIGIN      
        1 acgctcatga cggtcgcgac cgcgagctgg ccattcttca ccaccgggcg cttctcgccg
       61 ccaccgaccg ccaggatcgt cgagtgcggc gggttgatga cggcggtgaa atccttgatg
      121 ccgaacatgc cgagattgga cacggccgtg gtgccgccct ggtactcttc cggcttgagc
      181 ttgcggccct ttgcgcggac agcgaagtcc ttcatcgcgt tggcgatctc tgacaaggtc
      241 ttgctctcgg ccttgcggat gatcggcgtg atcagcccgt gccccggcag cgccaccgcg
      301 accccgacgt cggcgtgctt gtgcttgagc atggcgcctt cggtccaggt gacgttggcg
      361 tccggcacgc gcgtgagcgc cacggcgagc gccttgatga ccatgtcgtt gaccgagatc
      421 ttgtaggccg gcttgccgtc cttgtccttc ggcgccgccg cgttggcctg ctcgcgcatc
      481 gccagcagcg cgtcgatctc gcagtcgacg gtcaggtaga attgcgggat cgtctggcgc
      541 gcttcggtga gccgccgggc gatcgtgcgc cgcatgttgt cgtgcgggat ctcctcgtac
      601 gagccggctt cgaacagcgc cttcacctgc gcgtccgacg gagcgcgcgc gaccaacggc
      661 gcggccggct ggggcgcagc ggccttcgcg gtgccgccac tgatggcgcc gcgcacgtcg
      721 cgctcgacga tgcggccatg cgggccggag ccctgcacgc gcgacaggtc gatgctggcc
      781 tccttggcga tgcgccgtgc caggggcgag gcgaataccc gccctgcccc gttgcctttg
      841 gctgcctcgg ccctggccgg cgcggcttgc gcctgcccgg cgccggccgt cggctgggcc
      901 gcgggctgcg ctgcggcagc cggctgtgat tgcgctgctt gcggtgcggc ctgcgcggcg
      961 gcggccggct tggcggcagg cgcgccgccc gaagccgaca cgctcttcgg gtcctcgccc
     1021 tcgccggcga tcagcgcgat cagctggttg accgggacgt cggccgtgcc ttccggcacg
     1081 acgatcttgg cgaggacgcc ctcgtcgacc gcctccacct ccatggtggc cttgtcggtc
     1141 tcgatctcgg cgatcacgtc gccggacttg atcgggtcgc cctccttctt gagccacttg
     1201 gcgagattgc ccttctccat cgtaggggag agggcgggca tcaggatgtt gatgggcatc
     1261 ggttattcca ccccagtctc aaaagcgcgc agacgaaacg atcagtggat cggcgcggcg
     1321 cggcgtccgg ctctcagccg ccgttgcgac gcggtcgatc tcgcatccca atgggtccgg
     1381 catcagcggt agctgaccgc cttcgccgcc tggacgattt cggcgacgtt cggcagcgcc
     1441 agcttctcga ggttggccgc gtagggcatc ggcacgtcct tgccggtgat gcgcgtgacc
     1501 ggcgcgtcga ggtagtcgaa cgcctcctgc atgatgcgcg ccgatatctc ggcgcccacg
     1561 cccgattgcg ggaaaccttc ctccacggtg atgcagcgcc cggtcttctg aaccgaggcg
     1621 acgaccgttg ccgtgtccat cggccggatc gtgcgcaggt cgatcacctc cgcctcgatg
     1681 ccttccttgg ccagctcctc ggcggccttg agcgcgtagg tcatgccgat gccgaacgag
     1741 acgatggtca cgtccttgcc ctgccggtgc acgcgcgcct tgccgatcgg cagcacgaag
     1801 tcgtcgagct tcggcaccgg gaacgactgc ccgtagagga tttcgttctc gaggaagatg
     1861 accgggttgg cgtcgcggat ggcggccttg agcaggccct tggcgtcggc ggcggtgtag
     1921 ggcgccacga ccttgaggcc gggcacgttc gaataccagg ccgcgtagtc atggctgtgc
     1981 tgcgcgccga cgcgcgcggc ggcgccgttc ggcccgcgga acacgatggg agcgcccatc
     2041 tggccgccgg acatgtagag cgtcttggcg gccgagttga tgatctggtc gatcgcctgc
     2101 atggcgaagt tccaggtcat gaactcgacg atcggcttga ggccggtcag ggctgcgccg
     2161 acgccgaggc cggcaaagcc atgctcggtg atcggcgtgt cgacgacgcg cctcgcgccg
     2221 aattcctgca gcaggccctg tgtgaccttg taggcgccct ggtactccgc gacctcctcg
     2281 cccatgacga acacgtccgg gtcgcgccgc atctcctcgg ccatcgcgtc gcgcagggct
     2341 tcgcgcaccg tcatcgtcac catctcggtg ccttccggca cctccggccc ggcgacggtc
     2401 tcgggccgcg gcggctgagc g
//
LOCUS       DATAIQ010000559         1776 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_28778, whole genome shotgun sequence.
ACCESSION   DATAIQ010000559 DATAIQ010000000
VERSION     DATAIQ010000559.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1776)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1776)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1776
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_28778"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..579)
                     /locus_tag="VHN20_09260"
     CDS             complement(<1..579)
                     /locus_tag="VHN20_09260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018181445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HEX2725993.1"
                     /translation="MLLDADPARAFVPYPAVQVPHAESGPLSGLTFAVKDLFDVAGYP
                     TGGGSPHVLARSGIKSRSAPTVQRLLDAGARFVGKTHTDELAFSMNGKNAHFGTPLNG
                     AAPDRIPGGSSSGSASAVSNRLCDFALGTDTGGSVRAPANHCGLFGIRPTHGRVSLEG
                     CLDLAPTFDSCGYFTCDAGLFVRVGEVLLGDDP"
     gene            761..>1776
                     /locus_tag="VHN20_09265"
     CDS             761..>1776
                     /locus_tag="VHN20_09265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX2725994.1"
                     /translation="MIAALVSRSLLIAGVVLATLLASAAGTWAQQGPIKVGELNSYSR
                     MAAFAVPYRNAMQLAQDEINAKGGLLGGRKIEFVFRDDGGTTGDATRVAEELVTRENV
                     AFLVGTFLSNVGLAVADYANQRKVLFLASEPLSDAITMAQGNRYTFRVRPSTYMLTKM
                     LVDAVKDRNVKRWAIVAPNYEYGQSAAANFKRLIKEVNPAAEIVAEQYPALGRVDAGA
                     TVNALAQAKPDGIFNVLFGPDLAPFVREGNTRGLFEGRTVASLLTGEPEYLIPLGEET
                     PEGWIVTGYPWEQITDPKHKAFAEAYRARFKDTPRLGSLLGYVVAYMVRDVIEKAGSA
                     DTGKL"
BASE COUNT          323 a          594 c          592 g          267 t
ORIGIN      
        1 cggatcatcc ccgagcagca cctcgccgac gcggacgaac aatccggcat cacacgtgaa
       61 atagccacaa ctgtcgaagg tgggcgcgag gtcgaggcag ccttcgagac tgacgcggcc
      121 gtgcgtggga cggatgccga acagcccgca atggttggcc ggcgcccgga cggatccgcc
      181 cgtgtcggtg ccgagggcga aatcacacag ccggttcgac accgccgacg ccgacccgga
      241 cgacgagccg ccgggaatgc gatcaggcgc cgcgccgttc agcggcgtgc cgaaatgcgc
      301 gttcttgccg ttcatggaga aggcgagctc gtccgtatgc gtcttgccca cgaagcgggc
      361 gccggcgtcc aggagccgct gcacggtcgg ggcgctgcgg gatttgatgc ccgaccgcgc
      421 gagaacgtgc gggctgccgc cgccggtcgg gtagccggca acgtcgaaca gatccttcac
      481 ggcgaaggtg agcccgctca gcggcccgga ttctgcatgg ggcacctgca cggcgggata
      541 aggaacgaaa gcgcgggcgg gatcggcatc cagaagcatg atctcctcgt tggacaagca
      601 actcggcggg tctctcttat agccgccgtt cggcaggggc gcgcggaagc agccgcgtgg
      661 acgatcggca gtttccgcgc ttgctgcgtt atcgactatg gtagcggtgc ttccgcatgc
      721 cgcgaaaggc ggatatcaga acaaaaaagg agcaggagcc atgatcgcgg cactggtgtc
      781 tcgaagcctt ttgatcgcag gcgttgtcct ggccacgctg ctcgccagcg ccgccggaac
      841 gtgggcgcag caaggcccga tcaaggtcgg cgagctgaat tcgtacagcc gcatggccgc
      901 tttcgcggtc ccttatcgca acgccatgca gctcgcgcag gacgagatca acgccaaagg
      961 cggcctcctc ggcggccgca agatcgagtt cgtcttccgt gacgacggcg gcacaacggg
     1021 cgacgcgacg cgggtcgccg aagagctcgt cacgcgcgag aatgtggcgt ttctggtcgg
     1081 caccttcctg tccaatgtcg ggctcgcggt cgccgactac gccaatcagc gcaaggtcct
     1141 gttcctggcc tccgagccgc tgtccgacgc gatcacgatg gcgcagggca accgctacac
     1201 cttccgcgtc cggcccagca cctacatgct caccaagatg ctggtcgatg ccgtcaagga
     1261 ccgcaacgtc aagcgctggg cgatcgtcgc cccgaactac gaatacggcc agtcggccgc
     1321 tgccaacttc aagcgcctga tcaaggaggt caatccggcc gccgagatcg tggccgagca
     1381 atacccggcg ctcggccggg tcgatgccgg cgccaccgtc aacgcgctcg cccaggccaa
     1441 gcccgacggc atcttcaacg tgctgttcgg ccccgacctc gcgccgttcg tacgcgaggg
     1501 caatacgcgc gggctgttcg aaggccgcac ggtcgccagc ctcctcaccg gcgagccgga
     1561 atacctgatc cccctcggcg aagagacgcc cgagggctgg atcgtcacgg gctatccctg
     1621 ggagcagatc accgatccca agcacaaggc gttcgcggag gcgtaccgcg cgcgcttcaa
     1681 ggacacgccg cggctcggct cgcttctcgg ctacgtggtc gcttacatgg tgcgcgacgt
     1741 gatcgagaag gcgggctcgg ccgacaccgg gaagct
//
LOCUS       DATAIQ010000560         5455 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_306102, whole genome shotgun sequence.
ACCESSION   DATAIQ010000560 DATAIQ010000000
VERSION     DATAIQ010000560.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 5455)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5455)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5455
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_306102"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..401
                     /locus_tag="VHN20_09270"
     CDS             <1..401
                     /locus_tag="VHN20_09270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012333060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX2725995.1"
                     /translation="AAAPLAGLVVLAIDNEPSILEGMRALLGGWDCRVITAAGLKEAL
                     DAVAAGADTPEVVIADYHLDEGDGLEAIARLRETLAADVPAMLVTADRSPTVRERAAL
                     INVHVLNKPVKPAALRALLAQWRATRVAAE"
     gene            complement(438..1061)
                     /locus_tag="VHN20_09275"
     CDS             complement(438..1061)
                     /locus_tag="VHN20_09275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxychromene-2-carboxylate isomerase"
                     /protein_id="HEX2725996.1"
                     /translation="MPRTIDYYFSLASPWAYIGHAPFKDIARRHGVAVNHKPIFLGRV
                     FAETGGQPLPQRHPARQRYRMVELQRWRERRRLSFNLRPKFWPFEVTLADRFVIAATS
                     AGKDPDEFLRRAFKGIWEEDRNLADPLVIAELAEASGLDSTSLIKSAQGDMTEALYAL
                     NLENAVAQDVFGSPAYVLDGEVFWGQDRLELLDDALTSGRQPYTPAV"
     gene            1546..1911
                     /locus_tag="VHN20_09280"
     CDS             1546..1911
                     /locus_tag="VHN20_09280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2725997.1"
                     /translation="MHRSTSPLPLAGVLAVAGAARSESQPLCRPVLSLERSAHFDTRD
                     QQRRWTGIVGVDAAPCVASAGAFAIEFIRHKENAPVVAFTEHFTWRPGQTEVTVELWR
                     DEWIDVNRIVDVAPCGCRE"
     gene            complement(1930..3240)
                     /locus_tag="VHN20_09285"
     CDS             complement(1930..3240)
                     /locus_tag="VHN20_09285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012335392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin family protein"
                     /protein_id="HEX2725998.1"
                     /translation="MFELFIALVLIALNGLFALSELAVVSARKMRLKTLAEAGRPGAA
                     AALKLAEDPGRFLSTVQIGITLVGILAGAFSGAALGARVSEAFTYWGMAPWLAEPLGF
                     GLVIGAITFLSVVIGELVPKHLALKNAEGIACAVAPAMAVVSRIAAPVVSLLDAATKL
                     VFRLFGASLEPDTAVTEEEIKTLVAEAETAGVIETDERLMISGVLRLGDRPVGGIMTP
                     RTEVEWVDIDGSDAEIRQALLDTGHSRLPVAQGEPDNVIGVVQVRELLKPLLRGDPLD
                     VRAFVRSAPAIPDTVDALDALNVLRDAEVPMALVHDEYGHFEGVVTPADILDAIAGAF
                     RSDEDATEPEAVQREDGSWLLAGWMPADEMADQLGIKLPEPRRYHTVAGLVIDELEHM
                     PATGEKVEALGWCFEVVDLDGRRIDKVLARPCSEETARVASAAG"
     gene            complement(3575..4558)
                     /locus_tag="VHN20_09290"
     CDS             complement(3575..4558)
                     /locus_tag="VHN20_09290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016847076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator GcvA"
                     /protein_id="HEX2725999.1"
                     /translation="MPRRLPPLNALKAFEAAARHESFTRAADELCVTQGAVSHQVKAL
                     EAELGVKLFNRERQRLIITEPGREYLAVLRDALDRIALGTERLVQRQRSGVLTVSTSP
                     DFAAKWLVSRLGRFSEAHPEIDLRISATMHHVDFAREEVDLAVRHGDGNWPGLEAVRL
                     STEQLFAVCSPKLLSGPRRIREPADLLRHPLLHLDDRKDWSRWLEAAGLADAKPVHGP
                     VLNRVSMLIDAAVDGQGVALARTTLAAWDLINGRLVRPFATVLPVSKTYWIVAPRPTW
                     ALPKVAAFRDWLLAEAAEDARRLKALNGPARPLARATSRPRSGSAPRPPAS"
     gene            complement(4879..5310)
                     /locus_tag="VHN20_09295"
     CDS             complement(4879..5310)
                     /locus_tag="VHN20_09295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018406485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MucR family transcriptional regulator"
                     /protein_id="HEX2726000.1"
                     /translation="MNETPAPNYIELAADIVSAFVTNNSIPATELPALIGTVHTALKQ
                     VANGGVQPREELKPAVPIKKSITADYVICLEDGRKLKSLKRHLRSAYGLTPDQYRAKW
                     GLEPDYPMVAPNYAKKRSELAKSMGLGQKRKNAGKQRRKAA"
BASE COUNT          911 a         1811 c         1857 g          876 t
ORIGIN      
        1 cggcggccgc gcccctcgct ggcctcgtcg tcctggcgat cgacaacgag ccgtcgatcc
       61 tcgaagggat gcgcgccctg ctcggcggct gggactgccg cgtgatcacg gccgctgggc
      121 tcaaggaagc gctcgatgcc gtcgccgccg gcgccgacac cccggaggtg gtgatcgccg
      181 attatcatct cgacgaaggc gacgggctgg aggcgatcgc gcgtttgcgc gagacgctcg
      241 cggcggacgt ccccgccatg ctcgtcaccg ccgaccgctc gccgacggtc cgcgagcggg
      301 ccgcgctgat caacgtccac gtgctcaaca agccggtcaa gcccgcagcc ctgcgcgccc
      361 tccttgcgca atggcgcgcc acccgcgtcg cggcggagtg accgccaacc tctccccggc
      421 tcgcggggga gaggcgccta aaccgccggc gtatacggct ggcggccgct ggtgagggcg
      481 tcgtcgagaa gctcgagccg gtcctggccc caaaagacct cgccgtcgag cacgtaggcg
      541 ggcgagccga acacgtcctg cgcaaccgcg ttctcgagat ttagcgcgta aagcgcctcg
      601 gtcatgtcgc cttgcgccga cttgatcagc gaggtcgagt cgagaccgga cgcttcagcg
      661 agctcggcga tgacgagcgg gtcggcgagg ttgcggtcct cctcccagat tcccttgaag
      721 gcgcggcgga ggaattcgtc ggggtccttg ccggccgacg tagcggcgat cacgaagcgg
      781 tcggcgagcg tgacctcgaa cggccagaat ttcggccgca gattgaacga caggcggcgc
      841 ctctcgcgcc aacgctgcaa ctcgaccatg cggtagcgct ggcgggccgg atggcgctgc
      901 ggcagcggct gcccgccggt ctcggcgaac acccggccga gaaagatcgg cttgtggttg
      961 acggcaacgc cgtgacgccg cgcaatgtct ttgaacggcg catggccgat ataggcccac
     1021 gggctcgcga gcgagaagta atagtcgatg gtgcgcggca tggcagaagc tggctttcgg
     1081 ttgcgataga tcccgccgga acactcctct gctgcgtcga ccaaagtcaa tgacacggtc
     1141 acgatcggcc gcgtgagcgg gaccaattca aattgaatcg atccaggctc tcgttcgctt
     1201 tgagtcgcat gaccctatcc ggcgaattgg cgtcgacatc gccggatcct gctcccgccg
     1261 cggcggcatg aggattttta tggcgagccg cagaaatgat gctttgcgga gcgtgcccgc
     1321 gttcggttac gtgagcttcg tcgggccata aacacgcagc cgcccggctt tccgaaagac
     1381 gcttccgtcc aagcgctgct ccagccccgc ccggggaagg agcgcatgtg accgaggcaa
     1441 gcccggcgac ctttccttcc gatcctgcga acgccccctg gggggttcgc gtacaagcgc
     1501 ggccgccgtt caggcgcgtt cgcggcgatc ttcaggagga cgagcatgca ccgatcgaca
     1561 tcacccctgc cgctggccgg cgtccttgcc gttgccggcg cggcgcgttc cgaaagccag
     1621 ccgctgtgca ggccggtcct ctcgctcgag cggtcggcgc atttcgacac gcgcgaccag
     1681 caacggcgat ggaccgggat cgtcggggtc gacgcggccc cctgcgtggc ctcggcggga
     1741 gccttcgcaa tcgaattcat tcgtcacaag gagaacgcgc ccgtcgtcgc cttcaccgag
     1801 cacttcactt ggcgtcccgg acagaccgaa gtgaccgtgg agctctggcg cgacgaatgg
     1861 atcgacgtga atcgcatcgt cgacgtcgct ccttgcggct gtcgcgagtg accgctggcg
     1921 ctacgcggat cagcccgcgg cgctcgcgac ccgcgccgtc tcctcggagc atggccgcgc
     1981 cagcaccttg tcgatgcgcc gtccgtcgag gtcgacgacc tcgaagcacc agcctagcgc
     2041 ctcgaccttc tcgccggtgg cgggcatgtg ctcgagctcg tcgatcacaa ggccggcgac
     2101 ggtgtggtag cgccgcggct caggcagctt gatgccgagc tggtccgcca tctcgtcggc
     2161 aggcatccag ccggccagga gccacgaccc gtcctcgcgc tgcaccgctt cgggctccgt
     2221 cgcgtcctca tcggaccgga aggcgccggc gatcgcgtcg agaatgtcgg ccggcgtcac
     2281 gacgccttcg aaatggccat attcgtcatg gaccagcgcc atcggcacct cggcgtcacg
     2341 caggacgttg agggcgtcga gcgcgtcaac cgtgtcgggg atggccggcg ccgaacgcac
     2401 gaaggcgcgc acgtcgaggg ggtcgccgcg caagagcggt ttcaggagct cgcgcacctg
     2461 caccacgccg atgacgttgt ccggctcccc ttgcgccacg ggcaggcgcg aatgcccggt
     2521 gtcgagcagg gcctgccgga tctcggcatc gctcccgtcg atatcgaccc actccacctc
     2581 ggtccgcggc gtcatgattc caccgaccgg ccggtcgccg agacggagca cgccggagat
     2641 catgagccgc tcgtcggttt cgatgacacc tgcggtctcg gcctccgcca ccagggtctt
     2701 gatctcctcc tcggtcaccg ccgtatcggg ctcgagcgaa gcgccgaaca gccggaagac
     2761 gagcttggtc gccgcgtcga gcagcgacac gaccggcgcg gcgatccggg agacgactgc
     2821 catggcagga gcgaccgcac aggcaattcc ttcggcattc ttgagcgcca ggtgcttcgg
     2881 cacgagctcg ccgatgacga ctgacaggaa cgtgatcgcc ccgatcacga ggccgaagcc
     2941 gagcggctca gccagccatg gcgccatgcc ccagtacgtg aacgcctcgc tgacgcgggc
     3001 gccgagggcc gcgcccgaaa aggcaccggc caggatgccg acgagcgtga tgccgatctg
     3061 cacggtcgac aggaagcggc ctggatcctc ggcaagcttg agggcggcgg ccgcacctgg
     3121 ccggccggcc tcggcgaggg tcttaagcct catcttgcgg gcagagacga cggccagctc
     3181 ggaaagcgcg aaaagcccgt tgagggcaat caggaccagc gcgatgaaaa gctcgaacaa
     3241 cgggacccag caaggccggc tcaggagcgc cggacctctc ctatgcgtgg gcgctcatat
     3301 ggagcctgcc ggcgccgcgg tcaaatggga tcagggtttg ccccgacaaa ttcgcacagc
     3361 cgaaagcgtc gccgggcgct gagcggacac accgctcgcc gaagagggca ccgccgacgg
     3421 aactcggccg gaccgctccc aggcgccgct tcgcatgcac catgtgatcg gggcgacgct
     3481 gaagcgcggg cgcttcggat gaacgatccc gcgccgatgt ctttgaatcg catgatctta
     3541 tttcggcaaa gtgtccgttt cgccggggca tgcactaact ggctggcgga cggggcgcag
     3601 atccgctcct ggggcgcgac gtggctcgcg ccagcgggcg cgccggcccg ttcagcgcct
     3661 tgagacggcg cgcgtcctcg gcagcctcgg cgagcagcca gtcgcggaac gcggcgacct
     3721 tgggcagggc ccaggtcggc ctgggggcga cgatccagta ggtcttggac accggcagca
     3781 cggtcgcgaa tggccgcacg agccggccgt tgatcaggtc ccaggccgcc agcgtggtgc
     3841 gggcgagcgc gacgccctgg ccgtcgacgg cagcatcgat cagcatgctg acgcggttga
     3901 gcaccggccc atgcacgggc ttggcgtcgg caagcccggc cgcctcgagc cagcgcgacc
     3961 agtccttgcg gtcgtcgaga tgcagcagcg ggtgacgcag cagatcggcc ggctcgcgga
     4021 tgcgacgcgg cccggacagc agcttggggc tgcacaccgc gaacagctgc tcggtcgaca
     4081 gacgcaccgc ctcgaggccc ggccagttgc cgtcgccgtg ccgcaccgcg aggtcgacct
     4141 cctcgcgggc gaaatcgaca tgatgcatgg tggccgagat gcgcaggtcg atctccgggt
     4201 gcgcttcgga aaagcggccg agccggctga cgagccattt ggccgcgaag tcaggtgacg
     4261 tgctgaccgt gagcacgccc gagcgttgcc gctgaaccag gcgctcggtg ccgagcgcga
     4321 tgcggtcgag cgcgtcgcgc agcaccgcca agtattcgcg gcctggctcg gtgatgatca
     4381 gccgctggcg ctcgcggttg aagagcttga cgccgagttc cgcctcgagc gccttgacct
     4441 ggtggcttac cgctccctgg gtgacgcaaa gctcatcggc cgcgcgcgtg aagctctcgt
     4501 gccgcgccgc agcctcgaat gccttgaggg cgttgagcgg aggaagtcgg cgaggcatcg
     4561 ctgtccggca tgagaaaaac taatcaatgc tagatcaggc aggcgtgcgc gccaagccgt
     4621 cccgcttacc aaaaaagctg tgggcgcaga cgcaaaaagg cgccctcgcc gagggcgcca
     4681 gatcgttttt tgctcaacgc actcaccatg cccgaatggc cgtgagtgct ttttgatatt
     4741 aaccccgaaa tcggacggca actggtgtgg ggagtgcctt tcgggggagc ggagctcagc
     4801 gggtgagcgc atgtccgcgg cgtcggagaa gcggcgtcgc cgtccagccg agagcgcgct
     4861 gcggttgcaa cgccgaggtc aggccgcctt gcgccgttgc ttgccagcgt tcttgcgctt
     4921 ttgtcccagg cccatgctct tggccagttc ggaacgcttc ttggcgtagt tcggggcaac
     4981 catcgggtag tccggctcga gcccccactt ggcgcgatac tgatcgggag tcagcccgta
     5041 agccgagcgc aaatgacgct tcagcgactt cagcttcctg ccgtcctcga ggcaaatcac
     5101 gtagtcagcg gtaatcgact tcttgatcgg aacggcgggc ttcagttcct cgcgaggctg
     5161 aacgccgcca ttcgccacct gcttgagcgc cgtatgcacg gtgccgatga gagccggcag
     5221 ctcggtggcc ggaatggaat tgttggtaac gaaggccgac acgatatcgg cggcaagttc
     5281 gatgtagttg ggcgcggggg tttcgttcat cgggacttcc tatggcgcat tcgcgcacgg
     5341 attcatcggc tagaagcagc acggtggatg ctcgataagc gcagctcgac aggtttgcaa
     5401 ggcattgaat cggcggcgtg cttatttcgc acgtgcgtca attgatttcg cacgt
//
LOCUS       DATAIQ010000561         5230 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_28927, whole genome shotgun sequence.
ACCESSION   DATAIQ010000561 DATAIQ010000000
VERSION     DATAIQ010000561.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 5230)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5230)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5230
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_28927"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(23..292)
                     /locus_tag="VHN20_09300"
     CDS             complement(23..292)
                     /locus_tag="VHN20_09300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015685162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="usg protein"
                     /protein_id="HEX2726001.1"
                     /translation="MVSKEFIRQLEGYGLTTATILYRMPDHPRLLQTFIWQEYDLAPK
                     FPVLHDFLEFWRRELEGPLHSVTVAHSRLIKPAEFQAVDGILTLH"
     gene            615..2247
                     /gene="groL"
                     /locus_tag="VHN20_09305"
                     /pseudo
     CDS             615..2247
                     /gene="groL"
                     /locus_tag="VHN20_09305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509708.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; frameshifted; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
     gene            complement(2307..2567)
                     /locus_tag="VHN20_09310"
     CDS             complement(2307..2567)
                     /locus_tag="VHN20_09310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726002.1"
                     /translation="MAKQLKHPKRERIDRWVYRAQIALGGALVALLVRLVEMFRRPDR
                     DQTLALYMTLGLIVITTACLLGLLLRRKHVRAGIDVPPSQAD"
     gene            complement(2698..4317)
                     /locus_tag="VHN20_09315"
     CDS             complement(2698..4317)
                     /locus_tag="VHN20_09315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009736865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-binding/glycosyltransferase family
                     2 protein"
                     /protein_id="HEX2726003.1"
                     /translation="MKFGPVPVEEAVGALAAHSVRAGDAVLKKGSVITAEQAERLKRA
                     GVERIVAVRLEPGDVGEDQAAVRLAEAIAGPHVRVERPFTGRSNLFAESAGVLVIERD
                     EIDRINAVDEAITAATLPAFKPVVAGEMIGTVKIIPYAVPERMLSRALAVVQEGQGGT
                     VRVAPYARSRVAVVSTLLPGLKPTVVKKTLDVLATRLAPAEAGIVADRRVPHEAEALT
                     KDLAELAASDADLIVVFGASAIADRRDVIPAAIEAAGGRVEHFGMPVDPGNLLLVGSL
                     AGKPVIGAPGCARSPKENGFDWMLHRFLADIPVTRGDIASLGVGGLLMEIVTRPQPRS
                     EPAPAPVRPRIGALILAAGRGTRMGGPNKLVAEVSAKPLVRHAVEAALASKAGPAVVV
                     TGHEAGKVAAALVGLDVTLVHNQSYADGLSTSLRAGLAALGDDIDGVLVLLGDMPRVT
                     ADLLDKLIDAFDPAGGALAVVPVRNTHRGNPVLFSKVFFPELRTLTGDVGARGLLGSH
                     GEAVVEVPVDDEAAFFDVDTPEALVEARSRA"
     gene            complement(4314..5009)
                     /locus_tag="VHN20_09320"
     CDS             complement(4314..5009)
                     /locus_tag="VHN20_09320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015821640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XdhC family protein"
                     /protein_id="HEX2726004.1"
                     /translation="MQLSLLSALNAERSARRAAILVTDVGGSGEQRLVREAEAGTDVL
                     APVLKERFRSGKSGLVEADGGRFFLNVQVPPVRAVVVGAVHISQALAPMAKGLDLDVT
                     IVDPRTAFATPERFPDVPVLAEWPDAVLPRLALDRYTALLALTHDPKIDDPALTAALR
                     AECFYIGALGSKKTHARRIERLREAGFGDADMARIHAPIGLDIGAVSPAEIAVAILGE
                     LVAALRKDRRRAP"
     gene            complement(5147..>5230)
                     /locus_tag="VHN20_09325"
     CDS             complement(5147..>5230)
                     /locus_tag="VHN20_09325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011975638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XdhC family protein"
                     /protein_id="HEX2726005.1"
                     /translation="FGVADETAWRVGLSCGGRIKVYVERVD"
BASE COUNT          922 a         1803 c         1728 g          777 t
ORIGIN      
        1 ctttccttgg cggcgatgcg actcaatgaa gcgtcaggat gccgtcgacc gcctgaaact
       61 cggccggctt gatgagccgc gaatgggcga ccgtgaccga atggagcgga ccttccagct
      121 cgcgccgcca gaattccagg aaatcgtgca gcacgggaaa tttcggggcg agatcgtatt
      181 cctgccagat gaacgtctgc agcagccgcg ggtggtcggg catgcgatac aggatggtgg
      241 cggtcgtcag cccatagccc tcgagctgac ggatgaactc ctttgagacc atgcgacctc
      301 cttctcctga cggaggcccg ggccgctccc gagccgccgc ccggacgatg ctgacatcag
      361 caccgtccat actcaaggtt aaatgctgaa tttttcgttt cgttccaggg cgttagcagc
      421 atggattcgg gagtgctgcc aagttcgcgg agctcattgc gcagcgctgg cacccccatt
      481 cctggagtgc taaatttcgc gcgcgcagct ctgtaaggca ccgatctcga atcgctggag
      541 aagcgaccgc tgcggaaacg aaggccgcct gacgggcgcg ccttcgtcgt gatgtctcag
      601 gaggagcgac aatcatggct gctaaggaac tcaaattctc gtccgacgcg cgcgcgaaga
      661 tgctgcgcgg ggtcgaaatc ctgtcgaacg ccgtcagggt gacccttggg cccaagggcc
      721 gcaatgtcgt gctggacaag tcctttggcg cgccccgcat caccaaggac ggcgtcgccg
      781 tcgccaagga gatcgagctc gaggacaagt tcgagaacat cggcgcccag atggtgcgcg
      841 agttcgcctc caagaccagc gacctggccg gcgacggcac cacgacggcg cccgtgcttg
      901 ccgccgcgac cgtcaaggag ggcgccaagg cggtggccgc cggcatgaac cccgatggat
      961 ctcaggcgcg gcatcgagat tgccgtcgaa gcggtcgtcg aggacgtcag gcgccacgcg
     1021 cgcaagatca cccggaacga cgagatcgcg caggtggcca ccatctcggc caacggcgac
     1081 acggagatcg gccagttcct cgccgaggca atggccaaag tcggcaacga gggggtgatc
     1141 acggttgagg aggcgaagtc gctcgccacc gagctcgacg tcgtcgaagg catgcagttc
     1201 gaccgcggct atctttcccc gtatttcgtc accaacgccg agaagatgcg cgtcgagctc
     1261 gaggatgctg acatcctgat caacgagaag aagctgtcgt cgctgcagga gttgctcccg
     1321 atcctcgagg cggtcgtgca gtcaggcaag ccgctcctga tcatcgccga ggacgtcgag
     1381 tgcgaggcgc tggcgaccct ggtcgtcaac aagctgcgcg gcggcctcaa ggtcgcagcc
     1441 gtgaaggccc cgggcttcgg cgaccgccgc aaggccatgc cgcaggacat cgccatcctg
     1501 accggcggcg cggccatctc ggaagacctc ggcatcaagc tcgagaacgt caagctcgac
     1561 atgctcgggc gcgccgggaa ggtcgtggtc gagaaggaga acacgaccct cgtcggcggc
     1621 gcgggatcga aggaagacat cgaagggcgc atccagcaga tcagggcgca gatcgaggag
     1681 accacgtccg actacgaccg cgagaagctg caggagcgcc tcgccaagct cgcgggcggc
     1741 gttgccgtga ttcgcgtcgg cggcgccacc gagatccagg tcaaggagcg caaggaccgc
     1801 gtcgacgacg ccatgcacgc caccaaggcg gccgtcgagg aaggtgtcct gccggggggc
     1861 ggcgtcgcgc tgctccgtgc cgccaagacc ctcgaggggt tgaagcccga caacgccgac
     1921 cacaaaaccg gcatcgacat cgtccggcgc gccatccagt ggccggcccg ccagatcgcc
     1981 ctcaacgccg gcgaggacgg ctcggtgatc gtcggcaaga tcctcgacag aagcgactat
     2041 gcctacggtt tcgacgccca gagcggcgaa tacggcgaca tgttccagaa gggcatcatc
     2101 gacccggcca aggtggtgcg ggccgcgctg caggacgccg cgtccgtggc cggcctcctg
     2161 atcacgaccg aggcgatgat cgccgaactg cccaagaaga agacgccgcc catgcccggc
     2221 gcgggttccg gcgacatgga cttctgaggc ttttttatcg acttgcgaag gcgcaggccg
     2281 ttgccgcgcc tttcttctct cgcaaatcaa tcagcttgcg acggaggcac gtcgatgccg
     2341 gcgcggacat gcttgcgcct cagcaggagc ccgagcaaac aggccgtcgt gatgacgatt
     2401 aatccaaggg tcatgtagag cgctagcgtc tggtcgcggt ctggccgacg gaacatttcc
     2461 accagtcgca cgaggagcgc gaccagcgct ccgcccaaag cgatctgcgc ccggtaaacc
     2521 caacggtcga ttcgttcgcg cttcggatgt ttcagctgct tcgccatgcg tcgaaaacgc
     2581 cgtcctcagc cttcaacatc ggctccgcaa gagcgtgatc gatctagcct gaatcgatca
     2641 cgcgctcttc ttatcaggcc acatgatctt tccggcgaga tggtccactt cgcgggatca
     2701 tgctctggag cgggcctcca ccagtgcctc cggcgtgtcg acgtcgaaaa acgcggcttc
     2761 gtcatcgacc ggcacctcca ccacggcctc gccgtggctg cccagaagcc cgcgcgcgcc
     2821 gacgtcgccg gtaagcgtcc gcagctcggg aaagaacact tttgagaaca gcaccggatt
     2881 gccgcgatgc gtgttccgga ccggcacgac cgcaagcgcg ccgccggccg gatcgaacgc
     2941 gtcgatcagc ttgtcgagga gatccgcggt gacgcgcggc atgtcgccga gcaggacgag
     3001 cacgccgtcg atatcatctc caagggccgc gagacccgcc ctgagcgacg tcgacagccc
     3061 gtcggcatag gactggttat gcacgagcgt cacgtcgagc ccgacaagcg ccgccgcgac
     3121 cttcccggct tcgtgcccgg tcacgaccac ggctggaccc gccttcgagg ccagcgccgc
     3181 ctcgaccgcg tggcgcacca gcggcttggc cgacacctcg gcgaccagct tgttcggccc
     3241 gcccatgcgc gtaccacggc cggcggccag gatcagcgcg ccgatcctgg ggcgcaccgg
     3301 cgccggcgca ggctcgctgc gcggctgcgg ccgcgtgacg atctccatca gcagcccgcc
     3361 gacgccgagg ctggcgatgt cgccccgcgt caccggaatg tcggcgagaa accgatgcag
     3421 catccagtcg aacccgttct ccttcgggct gcgcgcgcag cccggcgcac cgatcacggg
     3481 cttgcccgcg agcgacccga ccagcagcag gttgccggga tcgaccggca tgccgaaatg
     3541 ctcgacccgc ccgccggccg cctcgatcgc cgccggaatc acgtcgcgcc ggtcggcgat
     3601 cgcggaagct ccgaacacca cgatcaggtc cgcgtcgctg gcagcgagtt cggcaaggtc
     3661 cttcgtcaag gcctcggcct cgtgcggcac gcgccggtcc gccacgatgc ccgcctcggc
     3721 cggcgcgagg cgcgtggcca gaacatcgag ggtcttcttc acgacggtgg gcttgaggcc
     3781 cggcagcagc gtcgagacga cggcgacccg gcttcgtgca taaggggcga cgcgcacggt
     3841 gccgccctgc ccttcctgca cgaccgccag cgcgcgcgag agcatgcgct cgggcacggc
     3901 gtagggaatg atcttgacgg tgccgatcat ctcgccggcg accaccggct tgaatgccgg
     3961 cagcgtcgcc gcggtgatgg cttcgtcgac ggcgttgatg cgatcgatct cgtcgcgctc
     4021 gatcaccagc acgccggctg actcggcgaa caggttcgag cggcccgtga acgggcgctc
     4081 gacgcggaca tgcggcccgg cgatggcctc ggcgagccgc acggcggctt ggtcctcgcc
     4141 cacgtcgccc ggctcgagcc gcaccgcgac gatgcgctcc acgccggcgc gcttcagacg
     4201 ctcggcttgc tcggcggtga tcacgctgcc cttcttgagc acggcgtcgc ctgcgcgcac
     4261 gctgtgcgcc gcgagcgcgc ccacggcctc ctcgaccgga accgggccga acttcacggc
     4321 gcccgcctcc ggtccttgcg caatgcggcg accagctcgc caaggatggc cacggcgatc
     4381 tcggccgggc tcacggcacc gatgtcgagc ccgatcggcg cgtggatgcg cgccatgtcg
     4441 gcgtcgccga aacccgcctc gcgcagccgc tcgatgcgcc gtgcatgcgt cttcttcgag
     4501 ccgagcgcgc cgatgtagaa gcactcggcg cgtaacgccg ccgtcagcgc cgggtcgtcg
     4561 atcttcggat cgtgggtcag cgcgaggagc gccgtgtagc ggtcgagagc aaggcggggc
     4621 aggaccgcat cgggccattc cgccagcacc ggcacatcgg gaaaacgctc gggcgtcgcg
     4681 aacgcggtcc tcgggtcgac gatcgtcacg tcgagatcga ggcccttggc catcggcgca
     4741 agcgcctggc tgatatgcac cgcgccgacc acgacggccc gcacgggagg cacctgcacg
     4801 ttgaggaaga accggccgcc atcggcttcg acgaggccgc tctttccgga gcggaagcgc
     4861 tccttgagaa ccggcgccag cacgtcggtg cccgcctcgg cttcgcgcac gaggcgctgc
     4921 tcgccgctgc cgccgacgtc agtcacaagg atcgccgcgc gccgcgccga ccgctcggcg
     4981 ttgagggcgg agagaaggga gagctgcatc tcaatctctc ccacagggag agaccggggt
     5041 gccgcggaag cggcgacctg gccaggggtg agacatctcc ggagagggca ctcccctcac
     5101 ccggacggct accgccgtct cgaccactcc ctttggcaga ggtgcattaa tccacccgtt
     5161 cgacatacac cttgatcctt cccccgcagg acaggccgac ccgccaggcg gtctcgtcgg
     5221 cgacgccgaa
//
LOCUS       DATAIQ010000562         2417 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_444211, whole genome shotgun sequence.
ACCESSION   DATAIQ010000562 DATAIQ010000000
VERSION     DATAIQ010000562.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2417)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2417)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2417
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_444211"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..454)
                     /locus_tag="VHN20_09330"
     CDS             complement(<1..454)
                     /locus_tag="VHN20_09330"
                     /inference="COORDINATES: protein motif:HMM:NF019403.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heparan-alpha-glucosaminide N-acetyltransferase
                     domain-containing protein"
                     /protein_id="HEX2726006.1"
                     /translation="MPASDADPGAATPRWAAIDSARGVAVAAMIAYHFAWDLSFFRLI
                     ATDVVGHPAWQLFARAIAATFLMLVGAGLVLAHGKGLRRRSFLRRLAVVAAAALMITL
                     ATSLAMPESYIFFGILHCIALTSVLALPFLRAPVAVALAAAAFAFAAPA"
     gene            720..1439
                     /locus_tag="VHN20_09335"
     CDS             720..1439
                     /locus_tag="VHN20_09335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sir2 family NAD-dependent protein deacetylase"
                     /protein_id="HEX2726007.1"
                     /translation="MVEAADAVAGFTGAGISTESGVPDFRSPDSPWTRNKPVPFAAFT
                     ASAEVRREAWRRKFAMDDVYRGARPNRGHLALASLVARGRMPAVITQNIDGLHQQSGI
                     PAERIIELHGNGTYAACLACGRRHELDWVRACFDASGDPPGCVQCGGVIKSATISFGQ
                     AMPESQMRRARELTLACDLFIAVGSSLVVYPAASFPALAKRNGARLVIINREATALDD
                     LADLVIRADIGAVLEPFIVRN"
     gene            1554..2177
                     /locus_tag="VHN20_09340"
     CDS             1554..2177
                     /locus_tag="VHN20_09340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020092069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HEX2726008.1"
                     /translation="MSDDFGSGAFSAKQAHSLIDPIRRDKLSVDAPTEPPLDIVEVSG
                     RIKWFDVAKGFGFVVPDNGMPDVLLHITCLRRDGYQTANEGARIVVEAVQRPRGLQAL
                     RIVSLDEASAIHPSELPMPRTHVAVTPTSGLEPAIVKWFNRLRGFGFVTRGDGTPDIF
                     VHMETLRRYGIAELKPGDQVLVRYGDGSKGLMAAEVRLVDGAVPSSH"
     gene            2185..>2417
                     /locus_tag="VHN20_09345"
     CDS             2185..>2417
                     /locus_tag="VHN20_09345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012384540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF192 domain-containing protein"
                     /protein_id="HEX2726009.1"
                     /translation="MFRLSPHARLAPFLILCLALLWSAGTHAQSFEPLTIVSGSGRHA
                     FQVELARNDAERAQGLMFRRNMAADRGMLFDFGR"
BASE COUNT          401 a          815 c          819 g          382 t
ORIGIN      
        1 aggcgggggc tgcgaaggcg aaggcggcgg ctgccagcgc gaccgccacc ggggcacgca
       61 ggaagggcag cgccagcacg ctggtcagcg cgatgcaatg caggatgccg aagaagatat
      121 agctctccgg catggccagg ctggtggcca gggtgatcat cagggcggct gcggcgacga
      181 cggccagccg cctcaggaac gaccgccggc gcaggccctt gccatgcgcc aggaccagcc
      241 cggcgccgac cagcatcagg aacgtcgccg cgatcgcccg ggcgaagagc tgccaggcgg
      301 gatgcccgac cacgtcggtc gcgatcagcc ggaagaagct gaggtcccac gcgaagtggt
      361 aggcgatcat ggccgcgacg gcgacgccac gcgcgctatc gatcgccgcc cagcgcggcg
      421 tcgcggcgcc cgggtccgca tcacttgccg gcaacggctc gtccctccga ttggcgcagg
      481 ccgcctggac aggggagggg ctgcgaaagc gcttgtaagg cacgacggcg ccaggcggaa
      541 aggacccggc tccgttcgtt cctcgccgct gcatgagcgc ttcggcaaag cggcgcccgc
      601 ctggtcggat catggtgcga aagggccttg gcggggcgca ccacgccgcc gaatatggac
      661 ggatgacgac gccgcaagcg cctgaccggc tggccggaca tgtcgacgcc ctgcgcgcca
      721 tggtcgaggc agccgacgcc gtggccggat tcaccggcgc cgggatctcg acggagagcg
      781 gcgttcccga cttccgctcg cccgacagcc catggacgcg caacaagccg gtcccgttcg
      841 cggccttcac ggcgagcgcc gaggtgcgcc gcgaagcgtg gcggcgcaag ttcgcgatgg
      901 acgatgtcta tcggggcgcg cggccgaacc gtggccatct ggcgctcgcg tcgctggtcg
      961 cgcgcggcag gatgcccgcg gtcatcaccc agaacatcga cgggctccat cagcagtcgg
     1021 gcatcccggc ggagcggatc atcgagctgc acggcaatgg cacctatgcc gcctgcctcg
     1081 cctgcgggcg ccgccatgag ctcgactggg ttcgcgcgtg cttcgatgcg agcggcgatc
     1141 cgccgggctg cgtgcaatgc ggcggcgtca tcaagtccgc gacgatctcg ttcgggcagg
     1201 ccatgcccga gtctcagatg cggcgcgcgc gcgagctcac gctcgcctgc gacctcttca
     1261 tcgccgtcgg atcgtccctg gtcgtctacc cggcggcgag ctttccggct ctcgccaagc
     1321 gcaacggcgc caggctggtg atcatcaacc gcgaagcgac ggccctcgac gacctcgccg
     1381 atctcgtcat ccgcgccgac atcggtgccg tgctcgaacc gtttatcgtg cgtaattgac
     1441 acactcggaa agaaagagtg aacagcagcc gaacttcgtg cttttcccga atcgggacaa
     1501 tgttattttt gtggccgaga atcgtgcggc gcgattcgat gcggtgtgaa tacatgtctg
     1561 atgattttgg ttctggcgct ttcagcgcaa agcaagctca ctcgttaatt gatcctatcc
     1621 gacgtgataa actttccgtc gacgctccaa cggagccgcc cctcgacatt gtcgaggtca
     1681 gcggacgcat caaatggttc gacgtggcca aaggcttcgg cttcgtcgtt ccggacaacg
     1741 gcatgcccga tgtgctgctg cacatcacct gcctacggcg ggacggttac caaactgcca
     1801 atgagggggc gcgcatcgtc gtcgaggcgg tgcaacggcc gcgcgggctg caggccctgc
     1861 gcatcgtctc gctcgacgag gcgagcgcca tccatccctc cgagctgcca atgccgcgca
     1921 cgcatgtggc ggtgaccccg acgagcggcc tcgagccggc catcgtcaaa tggttcaacc
     1981 ggctgcgcgg cttcgggttc gtgacccgcg gcgatggcac gcccgacatc ttcgtccaca
     2041 tggagacgtt gcggcgctac ggcatcgccg agctgaaacc cggggaccag gtcctcgtgc
     2101 gctacggcga cgggtccaag ggcctgatgg ccgccgaggt gcggttggtt gacggagccg
     2161 tgccgtcctc gcattaagga gctgatgttc cggctcagcc ctcatgcgcg tctggcgcca
     2221 ttcctgatcc tgtgcctggc gctcctctgg agcgccggca cccatgcaca aagcttcgag
     2281 ccgctgacca tcgtcagtgg gagcgggcgc cacgcgttcc aggtcgagct ggcccgcaac
     2341 gacgccgagc gcgcacaagg cctcatgttc cggcgaaata tggcggccga tcgcggcatg
     2401 ctcttcgact tcggccg
//
LOCUS       DATAIQ010000563         3240 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_306207, whole genome shotgun sequence.
ACCESSION   DATAIQ010000563 DATAIQ010000000
VERSION     DATAIQ010000563.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3240)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3240)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3240
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_306207"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(81..2642)
                     /locus_tag="VHN20_09350"
     CDS             complement(81..2642)
                     /locus_tag="VHN20_09350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014527546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter permease"
                     /protein_id="HEX2726010.1"
                     /translation="MGGRKPLGVTARLIAGIAISWSLFQLWYASPLAFMLGFGVFNDT
                     EARCIHLAFALFLAFTSYPAFASARRDRVPLYDWCLAFAAIAAVLYLVVFYRDLAQRP
                     GLPTGADIAVSVIGIVLLIEASRRAEGPWMPVISITMLLFVFAGPYLPGLLAHKGASI
                     GRAASHFWLTAEGVFGVALGVSTSFIFLFVLFGALLEKAGAGNYFIQLAFSLLGQFRG
                     GPAKAAVVSSGMTGMISGSSVANVVTTGTFTIPLMKRVGYTPTQAGAIECAAGVNGQL
                     MPPVMGAAAFLMAEYVGISYADVCKHALLPALLTYGALFYVVDLEAVKAGMRGLPRSR
                     AQRWRDAIVKALVTICSLVILCGAVYWGLGWTKQVFGEAASWIAIAVVIGAYLVLIRV
                     RARHPDLPADDPSRAYVSVPDFYETARTGLHYVIPVVVLIWCLIVEEMSPGLAAFWGV
                     IAMGAVTLTHRPLTALFRAEPVGARAREGWRDFVAGLETGARNMAAVGIATATAGIMV
                     GTVTLTGVGLVMTEIVEFLSGGSIVIMLTLVGVICILLGTGLPTTASYVVVATLMAPV
                     VVELAAQNDLAVPLIAVHMFVFYFGLMADVSPPVGLAAYAAAAIAGADPIRVGWQGTW
                     YEFRTVLLPFIFIFNPEILMIDIGGPLHFVVVVACAAIAMMAFVAALQGFFFARNRWW
                     ETAALLLVCFTLFRPNFWMDLVTPPLETLPASEVMRVAGETRGGPLRLRIGSEDINGD
                     PVTKAVRLTLGESGGARDKLVQAGVTLSSLGGELAIASVRPGSEAARLKLRPGDRVEG
                     VSVPANRTSPFVFAIPALGVLAGIAFIQRRRRRLEASASRHEVEKQQPAKPLLQP"
     gene            complement(2953..>3240)
                     /locus_tag="VHN20_09355"
     CDS             complement(2953..>3240)
                     /locus_tag="VHN20_09355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013893921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HEX2726011.1"
                     /translation="KARPYYSEATIPGGMYANNPNPTTTYGVRAILVTSAKVPEATVY
                     ALVKATFDNFDEFKKLHPAFANLDPKEMVKAGISAPLHPGAEKYFKEKGWR"
BASE COUNT          608 a         1062 c         1120 g          450 t
ORIGIN      
        1 cgcgatccaa gggcgatccc gaggtcaccg gcgcggtgac ggcagctccc gacgccagcg
       61 ctgccgccga gcagaagacg tcagggttga agcaggggct ttgccggctg ctgcttttca
      121 acctcgtgcc gggatgctga cgcttcgaga cggcgccgcc ggcgctggat gaacgcgatc
      181 ccggcgagca cgccgagcgc gggaattgca aagacgaacg ggctcgtgcg gttcgccgga
      241 acgctcacgc cttcgacgcg gtccccgggc cgcagcttca gccgcgccgc ttccgatccc
      301 gggcgcacgg acgcgatcgc gagctcgccg ccgagcgacg acagcgtcac gccggcctga
      361 accagcttgt cgcgcgcgcc gccgctctcg ccgagggtga ggcgcacggc ttttgtgacg
      421 gggtcaccgt ttatgtcttc gctgccgatg cgcagccgaa gcggaccacc gcgcgtctcg
      481 ccggcgacgc gcatcacctc ggacgcgggc agcgtctcca gcggcggcgt gaccagatcc
      541 atccagaaat tcggccggaa cagcgtaaag cagacgagca gcaacgccgc ggtctcccac
      601 cagcggttgc gggcgaagaa aaatccctgc agcgccgcca cgaaggccat catggcgatc
      661 gccgcgcagg cgaccaccac gacgaagtgc agcggcccgc caatgtcgat catcaggatc
      721 tcggggttga agatgaagat gaacggcaac agcaccgtgc ggaactcgta ccaggtgcct
      781 tgccacccga cccgtatcgg atcggcgccg gcgatcgccg cggcggcgta ggcagcaagg
      841 ccaaccggcg gcgacacgtc cgccatcagg ccgaaataga acacgaacat gtgcacggcg
      901 atcagcggca ccgcgagatc gttctgcgcc gcgagctcga ccacaaccgg cgccatcagg
      961 gtggcgacca cgacatagct tgccgtggtc ggcagcccgg tgccgagcag gatgcagatc
     1021 acgccgacca gggtgagcat gatgacgatg ctgccgccgg acaggaactc gacgatctcc
     1081 gtcatcacga ggccgactcc cgtcagcgtg acggtcccga ccatgatgcc ggcggtggcg
     1141 gtggcgatgc cgacggccgc catgttgcgg gcgccagttt cgagcccggc cacgaaatcg
     1201 cgccagccct cgcgggcgcg ggccccgacc ggctcggcgc ggaacaacgc cgtcagcggc
     1261 ctgtgcgtga gcgtcacggc acccatggcg atcacgcccc agaaggcggc gagaccgggc
     1321 gacatctctt cgacgatcag acaccagatc aggacgacga ccgggatcac gtaatgcagg
     1381 cccgtgcgcg cagtctcgta gaaatcgggc acgctcacat aggcgcggct cggatcgtcg
     1441 gcgggcaggt ccgggtgtct ggcgcgcacc cggatcagga cgagataagc gccgatgaca
     1501 acggcgatcg cgatccagct cgcggcctcg ccgaaaacct gcttcgtcca gccgaggccc
     1561 cagtagacgg caccgcagag gatcacgagc gagcagatcg tcacgagcgc cttgacgatc
     1621 gcgtcccgcc agcgctgggc gcggctgcgc ggcaggcctc gcatgccggc cttcaccgcc
     1681 tcgagatcga ccacgtagaa cagtgcgccg taggtgagca gggccggcag cagcgcgtgc
     1741 ttgcacacat cggcgtagct gatgccgaca tattcggcca tcaggaacgc cgccgcaccc
     1801 atgaccggcg gcatcagctg cccgttgacg ccggcggcgc attcgatggc gccggcttgc
     1861 gtcggcgtgt agccgacgcg tttcatcagc gggatggtga aggtgccggt cgtcacgacg
     1921 ttggcgaccg acgagccgga gatcatgccg gtcatgcccg acgagacgac agcggccttg
     1981 gcggggccac cgcgaaactg tccgagcagc gagaaggcga gctggatgaa gtagttgccg
     2041 gcgccggcct tctcgagcag cgcaccgaag aggacgaaca ggaagatgaa gctcgtcgac
     2101 acgccgaggg cgacgccgaa cacgccttcc gcggtcagcc agaagtgcga cgcggcgcgg
     2161 ccgatcgagg cgcctttgtg cgcgagcagc ccgggcagat acgggccggc gaacacgaac
     2221 agcagcatgg tgatcgagat cacgggcatc cacggccctt ccgcccgccg cgaggcttcg
     2281 atgagaagca cgatgccgat gaccgagacg gcaatgtccg cgccggtcgg gagccccgga
     2341 cgctgcgcca gatcgcggta gaacacgacg agatacagca ccgccgcgat cgccgcgaag
     2401 gcgaggcacc agtcatatag cgggacgcga tcgcgccgcg ccgacgcgaa ggccggatag
     2461 gaggtgaaag cgaggaacag cgcgaaagcg agatggatgc agcgcgcctc ggtgtcgttg
     2521 aacacgccga agccgagcat gaaggccagg ggagacgcat accacagctg gaacagcgac
     2581 cagctgatgg cgatgccggc gatcaggcgt gcggtcaccc ccaatggttt gcggccgccc
     2641 atgtcggcct cttgcacgag ggcctcgagg tcgaccgcag acggggcgcc ttgctggctg
     2701 gtcacggttt catacctccc cttcacggga gggcggactc gcacgcgtca gcgtgcgggc
     2761 cgggtgggat cgtgacgcga agcgaagcgg catattctgc accggtgttt accccaccct
     2821 ggtcgcaccg aactcggtcg tgaccgagtt cgacatgaca tcagcaagtc ggcaacagcc
     2881 gacttgcgtg cgactcggct tcccgtgagg ggagggatga gcgaaggcgc tcgggcacgg
     2941 agggtagggc gttcaccgcc agcctttctc cttgaaatac ttttccgcgc cggggtgcag
     3001 cggggccgag atgccggcct tcaccatctc cttgggatcg aggttggcga aggccgggtg
     3061 aagctttttg aactcgtcga agttgtcgaa ggtcgccttg acgagcgcgt agaccgtcgc
     3121 ctccggcact ttggcgctgg tcacgaggat ggcgcgcacg ccataggtcg tcgtcgggtt
     3181 ggggttgttg gcgtacatgc cgcccggaat ggtcgcctcc gaatagtagg gcctggcctt
//
LOCUS       DATAIQ010000564         4025 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_244236, whole genome shotgun sequence.
ACCESSION   DATAIQ010000564 DATAIQ010000000
VERSION     DATAIQ010000564.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4025)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4025)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4025
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_244236"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..822
                     /locus_tag="VHN20_09360"
     CDS             <1..822
                     /locus_tag="VHN20_09360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012455326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /protein_id="HEX2726012.1"
                     /translation="ILPAFGIVSHIVSTFSKKPIFGYLGMAYAMVAIGLVGFVMWAHH
                     MYTVGLSLQTQAYFVFATMVIAVPTGVKIFSWIATMWGGSIRFTAAMQWAIGFIFLFT
                     VGGVTGVVLANAGVDRTLHDTYYVVAHFHYVLSLGAVFMIFGGIYYWFPKMSGYVIPE
                     WIGKTHFWISFIGANILFFPQHFLGLAGMPRRYADYPDAFAGWNFVSSMGAYMFFCGL
                     LFFIGAIIYVMFVRKEPAAANPWGEGATTLEWTLPSPPPFHQYETLPRIAETTHH"
     gene            950..1909
                     /locus_tag="VHN20_09365"
     CDS             950..1909
                     /locus_tag="VHN20_09365"
                     /EC_number="2.5.1.141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015927019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008495 - protoheme IX farnesyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0048034 - heme O biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme o synthase"
                     /protein_id="HEX2726013.1"
                     /translation="MSTLTTTLDQTAQTETAAALSGGEVGDYVALLKPRVMSLVVFTA
                     LVGMVVAHSAVHPVIAFGSLLMIAVGAGASGCLNMWWDADIDALMTRTRGRPIPAGRI
                     TSGEALSFGLSLSVGSVLALGLIGNWLAASFLAFTIFFYVVVYSMWLKRTTAQNIVIG
                     GAAGAFPPMIGEAAVSGTVSLETVVLFLIIFLWTPPHFWALALVKSGDYARAGIPMMP
                     NVAGAESTRRQILGYTLVLAPCGVMPVVLGFGGLIYALVSVLGGIAMIALACQVQRRR
                     DGEAAARAAQQLFAFSILYLFVLFAALLAEHGLGLHWAVPGVL"
     gene            1906..2073
                     /locus_tag="VHN20_09370"
     CDS             1906..2073
                     /locus_tag="VHN20_09370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726014.1"
                     /translation="MNSDNPSNKPVLSPEDIRRRRSRSIAIALVLGGFVLLFYFVTIA
                     KLGPQILSRPL"
     gene            2079..2681
                     /locus_tag="VHN20_09375"
     CDS             2079..2681
                     /locus_tag="VHN20_09375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase assembly protein"
                     /protein_id="HEX2726015.1"
                     /translation="MNKATQPDPMLKRRVRRTAAICIGVVAGMVGLAYAAVPLYDLFC
                     RMTGFDGTPRVGTAGGSRILDRTIRVRFDANVAPGLDWRFAPETVEIQARLGETQTVF
                     YKVRNAGTVPTAGIATFNVQPGQAGAYFVKIQCFCFNEQTLQPGEEMDVPVVFYVEPS
                     LADEPNLRDLPSITLSYTYFASKNGLPVATTSAGAAQPNL"
     gene            2748..3620
                     /locus_tag="VHN20_09380"
     CDS             2748..3620
                     /locus_tag="VHN20_09380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020091407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit 3"
                     /protein_id="HEX2726016.1"
                     /translation="MADAHDAHGVRHDYHLVDPSPWPLIGATAAFFMAVGFVLTVKNL
                     AIAGMHVGPYVFGAGILGVLYTMFNWWRNVIDEATYKGNHTRVVQLHHRYGMIFFIAS
                     EVMFFVAWFWAYFDASLYPNDPLQYARADLTGGHWPPKGIETFDPWHLPLLNTLILLT
                     SGTTVTWAHHALLHGDRKGLIWGLWLTVLLGLAFTGVQAYEYSHAAFKYSGHIYGATF
                     FMATGFHGVHVIIGTIFLAVCLWRAYRGHFTPQQHLGFEFAAWYWHFVDVVWLFLFAA
                     IYVWGAGAPGGAAH"
     gene            3737..>4025
                     /locus_tag="VHN20_09385"
     CDS             3737..>4025
                     /locus_tag="VHN20_09385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020093129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF983 domain-containing protein"
                     /protein_id="HEX2726017.1"
                     /translation="MEQSPNTPLWILSVATRARCPRCGKGRLFEGFLKLAKRCDACGL
                     DYSFADPADGPAFFAMMGMAIPAAAFAVWLELTYDPPTWVHLVTTVPLTFAL"
BASE COUNT          601 a         1383 c         1249 g          792 t
ORIGIN      
        1 atcctgccgg ccttcggcat cgtcagccac atcgtctcga ccttctccaa gaagccgatc
       61 ttcggctatc tcggcatggc ctacgccatg gtcgccatcg gcctcgtcgg cttcgtcatg
      121 tgggcgcacc acatgtacac ggttggcctg agccttcaga cccaggccta tttcgtgttc
      181 gccaccatgg tgatcgccgt gccgacgggc gtgaagatct tctcgtggat cgccaccatg
      241 tggggcggct cgatccgctt caccgcggcc atgcagtggg cgatcggctt catcttcctt
      301 ttcacggtgg gcggcgtaac cggcgttgtg ctggccaatg cgggggtcga ccgcacgctg
      361 cacgacacct actacgtggt ggcgcatttc cattacgtgc tgtcgctcgg cgccgtgttc
      421 atgatcttcg gcggcatcta ttactggttc ccgaagatga gcggctacgt gatcccggaa
      481 tggatcggca agacccattt ctggatctcg ttcatcggcg ccaacatcct gttcttcccg
      541 cagcatttcc tcgggctcgc cggcatgccg cggcgctatg cggattatcc ggacgccttc
      601 gccggctgga acttcgtgtc ctcgatgggc gcctacatgt tcttctgcgg actgctcttt
      661 ttcatcggcg ccatcatcta cgtgatgttc gtgcgcaagg agcccgcggc ggccaatcca
      721 tggggtgaag gcgccacgac gctggagtgg acgctgccct cgccgccgcc gttccaccag
      781 tacgagacgc tgccgcggat cgccgaaacg acgcatcact gaggaggctc tcgacagcgc
      841 ggctccgaca agccaccatt tcgcatcctg ggctcggctg gccgtggacc atccacggca
      901 ggccaagggg ccccggacgt ggctggggag tccctgcatg gtcaagacga tgtccacgct
      961 gacgaccacg ctcgatcaaa ccgcgcagac cgagaccgct gctgcccttt cgggcggcga
     1021 ggtcggcgat tacgtggccc tcctcaagcc gcgcgtcatg tcgctcgtcg tcttcacggc
     1081 gctggtcggc atggtggtgg cgcattcggc cgtgcacccg gtgatcgcct tcgggtcgct
     1141 gctgatgatc gccgtcggcg ccggagcctc cggttgtctc aacatgtggt gggacgccga
     1201 cattgatgcg ctgatgacgc gcacccgcgg ccggcccatc ccggccgggc gcatcacgtc
     1261 cggcgaagcg ctgtccttcg ggttgagcct ctcggtcggt tcggtcctgg ccctcgggct
     1321 gatcggcaac tggctggccg cgagcttcct ggcgttcacg atcttcttct acgtggtcgt
     1381 ctattccatg tggctgaagc gcacgacagc gcagaacatc gtgatcggcg gcgccgccgg
     1441 cgcctttccg cccatgatcg gcgaggcggc ggtgtccgga accgtcagcc tcgagaccgt
     1501 cgtcctgttc ctgatcatct tcctgtggac gccgccgcat ttctgggccc tggcgctcgt
     1561 caagtccggc gactacgcgc gcgccggcat tccgatgatg ccgaacgtcg ccggggcgga
     1621 gagcacccgc cgccagatcc tcggctatac gctggtgctg gcgccgtgcg gggtcatgcc
     1681 ggtggtgctc ggattcggcg ggctgatcta cgcgctggtg tcggtgctcg gcgggatcgc
     1741 catgatcgcc ctcgcctgcc aggtgcagcg ccgccgtgac ggcgaggcgg cggcgcgcgc
     1801 cgcccagcag ctgttcgcct tttcgatcct ttatctgttc gtgctctttg cggccctgct
     1861 ggccgagcat ggtctcggcc tgcattgggc ggttcccggg gtgctatgaa cagcgacaat
     1921 ccctcgaaca agccggtgct ctcgccggag gacatcaggc ggcggcgctc gcgttccatc
     1981 gccatcgcgc ttgtgctcgg cggcttcgtg ctcctcttct acttcgtgac gatcgccaag
     2041 ctcgggccgc agatcctcag ccggcccctg tgagcgagat gaacaaggcc acccaacccg
     2101 atcccatgct caagcggcgc gtccggcgca cggcggccat ctgcatcggc gtcgtcgccg
     2161 gcatggtcgg cctcgcctat gcggcggttc cgctttacga cctgttctgc cgcatgaccg
     2221 gcttcgacgg cacgccgcgc gtaggcacgg ccgggggcag ccggatcctc gaccgcacca
     2281 tacgggtgcg cttcgacgcc aatgtcgccc ccgggctcga ctggcgcttt gcgcccgaga
     2341 ccgtggagat ccaggcgcgg ctcggcgaaa cgcagacggt gttctacaag gtccgcaatg
     2401 ccggcacggt ccccaccgcc ggcattgcca cgttcaacgt ccagcccggg caggcaggcg
     2461 cctatttcgt gaagatacag tgcttctgct tcaacgagca gacgctgcag cccggcgagg
     2521 aaatggacgt gccggtcgtg ttctatgtcg agccctcgct ggccgacgag ccgaacctgc
     2581 gcgacctgcc ctcgattacg ctctcgtata cctatttcgc ctcaaagaac gggctgccgg
     2641 ttgcgacaac gagcgcaggc gccgcccagc cgaatctgta accagcgacg tgacaagcgc
     2701 cgcgaaacgc atcaaaagcc acgccaagag ccacggagac aagcaaaatg gccgatgccc
     2761 acgacgccca tggagtcagg catgactacc atctggtcga tccgagcccg tggccgctga
     2821 tcggcgccac cgccgccttc ttcatggcgg tgggcttcgt gctcacggtc aagaacctcg
     2881 ccatcgccgg catgcatgtt gggccttacg tgttcggggc cggcatcctg ggcgtgctct
     2941 acaccatgtt caactggtgg cggaacgtca tcgacgaggc gacctacaag ggcaaccata
     3001 cgcgggtcgt gcaactgcac caccgctacg gcatgatctt cttcatcgcc tccgaggtga
     3061 tgttcttcgt ggcgtggttc tgggcttatt tcgacgcctc cctctatccc aatgatccgc
     3121 tccaatacgc gcgcgccgac ctgaccggcg gccattggcc gccgaagggc atcgagacct
     3181 tcgatccctg gcacctgccg ctcctcaaca ccctgatcct gctgacctcc ggcaccacgg
     3241 tgacgtgggc gcaccacgcc ctgctgcatg gcgatcgcaa agggctgatc tggggtctct
     3301 ggctgacggt gctgctcggc ctcgccttca ccggcgtgca ggcctacgaa tacagccacg
     3361 cggcgttcaa atacagcggc cacatctacg gcgcgacctt cttcatggcg acgggctttc
     3421 atggcgtcca cgtcatcatc ggcacgatct tcctcgcggt ctgcctgtgg cgtgcctatc
     3481 gcggccattt caccccgcag cagcatctcg gcttcgagtt cgccgcctgg tactggcact
     3541 tcgtcgacgt ggtctggctg ttcctgttcg ccgccatcta tgtctggggc gcgggcgcgc
     3601 ccggcggcgc ggcccactga cgaacgccgg cggcggcacg aagagtcgca gcgagccgat
     3661 tcgcaaagga cgttgactgg cagccgcccg tgattacctc acgggcggga ggcgttcgtc
     3721 acctcaaggc attgccatgg aacagtcgcc caacactcct ctctggatcc tgtcggtagc
     3781 gacgcgcgcc aggtgcccac ggtgcggcaa gggcaggctg ttcgaggggt tcctgaagct
     3841 ggcgaaacgc tgcgatgcct gcggcctcga ctattccttc gccgatccgg ccgacgggcc
     3901 cgcgttcttc gccatgatgg gaatggcgat cccggccgcg gccttcgcgg tctggctcga
     3961 gctgacctac gatccaccga cctgggtgca cctcgtcacg accgttcccc tgacttttgc
     4021 gctct
//
LOCUS       DATAIQ010000565         2170 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_398550, whole genome shotgun sequence.
ACCESSION   DATAIQ010000565 DATAIQ010000000
VERSION     DATAIQ010000565.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2170)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2170)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2170
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_398550"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..461
                     /locus_tag="VHN20_09390"
     CDS             <1..461
                     /locus_tag="VHN20_09390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726018.1"
                     /translation="ACAHPSRDLVVGFGGWALAMMGRLFPRLVDFGMEATMEPMQKSD
                     EPGRRERRDNLYAPREDGAEHSSLPVSSRKTSLFLEAQIHPVATFAAIAGLGLAAAWL
                     LRPRPEDRHAMLERRHRAAGIMGDGQEWAAEAGQLGRRSTSEQRLASART"
     gene            537..1448
                     /gene="mepA"
                     /locus_tag="VHN20_09395"
     CDS             537..1448
                     /gene="mepA"
                     /locus_tag="VHN20_09395"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-insensitive murein endopeptidase"
                     /protein_id="HEX2726019.1"
                     /translation="MKLARTFAVTLVLAAATAAQAQDPGTLNPKPLPPLANPNAPGTP
                     AKELFGRKREPAPLAARAIGSYARGCVAGATALPVDGQTWQVMRLSRNRNWGHPRLIS
                     FLERLGKRVPEINGWPGLLVGDISQPRGGPMLTGHASHQLGLDADVWLTPMPDRRLTR
                     EEREMMSATDMVRPDRLDIDPSTWTPRHTALIRAVAGEPEVARIFVNPGIKKALCREA
                     GSDRGWLSKVRPMFGHNYHFHIRLWCPRGEAGCADQDPPPSGDGCGDELDRWFTQAMR
                     FPKPGKPRPPMTMAQLPAECRQVLVAE"
     gene            complement(1489..2145)
                     /gene="msrA"
                     /locus_tag="VHN20_09400"
     CDS             complement(1489..2145)
                     /gene="msrA"
                     /locus_tag="VHN20_09400"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008113 - peptide-methionine (S)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_function: GO:0033744 -
                     L-methionine:thioredoxin-disulfide S-oxidoreductase
                     activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HEX2726020.1"
                     /translation="MFLFRKNTAMPNASDALPGRTTPIATAERHFVNGHALKGPYPKG
                     MRQAVFGLGCFWGAERLFWKLDGVWVTAVGYAGGFTPNPTYEEVCSGRTGHTEVVLVV
                     YDPARVSYETLLKAFWEGHDPTQGMRQGNDVGTQYRSAVYVHDDAQRATAVASKEAYG
                     KALAARGHDPITTEIADAPTFYFAEDYHQQYLAKNPGGYCGLGGTGVACPASTGIAAE
                     "
BASE COUNT          324 a          764 c          755 g          327 t
ORIGIN      
        1 acgcctgcgc gcatcccagc cgcgacctgg tagtcggctt cggcggctgg gcgctggcca
       61 tgatgggacg cctgtttccg cggcttgtcg atttcggcat ggaggcgacc atggagccga
      121 tgcagaagtc cgacgagccg ggccggcggg agcggcgcga caatctctat gcgccgcgcg
      181 aagacggcgc cgagcattcg tcgctgcctg tcagctcacg caagaccagt ctgtttctcg
      241 aggcgcagat ccatccggtc gcgacctttg cggcgatcgc cgggctcggc ctggccgccg
      301 cctggctgct gcgcccgcgg ccggaagatc gccatgccat gctggagcgg cgtcaccgcg
      361 ccgccggcat catgggggac ggccaggaat gggcggcgga agcaggccag ctcggccgcc
      421 ggtcgaccag cgagcagcgc ctcgcgtccg ccaggacgtg aggccgtcct ggttgcgggc
      481 cagggtcgca ggccggggta tttcgcgatg cggcgccgcg cgatagcttg gggcccatga
      541 agctcgctcg cacctttgcc gtcaccctgg tgcttgccgc ggcgacggcc gcgcaggccc
      601 aggatccggg aaccctgaac ccaaagccgc tgccgccgct cgccaacccc aacgcgccgg
      661 gcacgccggc gaaggagctg ttcggccgca agcgcgagcc tgctcccctc gccgcacggg
      721 ccatcggcag ctatgcgcgc ggctgcgtcg ccggcgccac ggcgctgccc gtcgacggcc
      781 aaacctggca ggtgatgcgc ctgtcgcgca accgcaattg gggtcacccg cgcctgatct
      841 ccttcctgga acggctcggc aagcgggtgc cggagatcaa cggctggccg ggcctgctgg
      901 tcggcgacat atcgcagccg cgcggcggcc cgatgctgac cggacacgcc tcgcatcagc
      961 tcgggctcga cgccgacgtc tggctgactc cgatgccgga ccgccgcctc acgcgcgagg
     1021 agcgcgagat gatgtcggcg accgacatgg tgcgtcccga ccgcctcgac attgatccat
     1081 ccacgtggac gcccaggcac acggccctga tccgcgccgt ggccggcgaa cccgaggtgg
     1141 cgcgcatctt cgtcaatccc ggcatcaaga aagccttgtg ccgggaggcg ggcagcgacc
     1201 gcggctggct cagcaaggtg cggccgatgt tcgggcacaa ctaccatttc cacatccgcc
     1261 tgtggtgccc gcgcggcgag gccggctgcg ccgaccagga cccgccgccc tccggcgacg
     1321 gctgcggcga cgagctcgac cgctggttca cccaagccat gcgcttcccg aagccgggca
     1381 agccgcgccc ccccatgacc atggcgcaat tgccggccga atgccggcag gtgctggtgg
     1441 ctgaataagg gcagcctgcc gtgatcggct ggggagcggc cggagcgcct actcggccgc
     1501 gatgccggtg cttgccggac aggcgacgcc ggtgccgccg aggccgcaat agccgccggg
     1561 attcttggcg aggtattgct ggtggtaatc ctcggcgaag tagaaggtcg gcgcatcggc
     1621 gatctcggtc gtgatcgggt cgtggccgcg agcggcgagc gcctttccat aggcctcctt
     1681 cgaggcgacg gccgttgccc gctgcgcgtc atcatgcacg tagaccgccg aacggtattg
     1741 cgtgccgaca tcgttgccct ggcgcatgcc ctgcgttgga tcatggccct cccagaaggc
     1801 cttcagcaaa gtctcatagc tgacgcgcgc cgggtcgtag acgacgagca cgacctcggt
     1861 gtggccggtg cggcccgaac acacctcctc gtaggtcggg ttgggggtga acccgcccgc
     1921 atagccgacg gccgtcaccc agacgccgtc gagcttccag aacagccgct ccgcgcccca
     1981 gaagcagccg agcccgaaca ccgcctgcct cattcccttt ggatacgggc ccttcagggc
     2041 atggccgttg acgaaatgac gctcggccgt cgcaatcggg gtcgtgcgtc caggcagcgc
     2101 gtcggaggcg ttgggcatgg cggtgttttt gcggaacagg aacatggctg gctcctcgct
     2161 tgaggcccta
//
LOCUS       DATAIQ010000566         1736 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_197892, whole genome shotgun sequence.
ACCESSION   DATAIQ010000566 DATAIQ010000000
VERSION     DATAIQ010000566.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1736)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1736)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1736
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_197892"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..651
                     /locus_tag="VHN20_09405"
     CDS             <1..651
                     /locus_tag="VHN20_09405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726021.1"
                     /translation="PTLDEKAWRATEPHTPNPRARLEAVGELNRAGIPTSVLIAPLMP
                     GINDAPEQVAKIVELATEAGATSIGGNTLFLRGSVRTVFFDWLREHRPDLLPRYEELY
                     RRGAYLPEAQRRDIERAAGAPWAGRGYQQRWKHRVLERRRTLEREARERAAETLFSAM
                     APSSASSASAWPISFRRLRTMRRIVEKSSTIRNFIGVDMQASVGAVGAEMGRKRGG"
     gene            complement(666..1598)
                     /gene="motB"
                     /locus_tag="VHN20_09410"
     CDS             complement(666..1598)
                     /gene="motB"
                     /locus_tag="VHN20_09410"
                     /inference="COORDINATES: protein motif:HMM:NF006548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor protein MotB"
                     /protein_id="HEX2726022.1"
                     /translation="MADGKKLQPIIIKRIKKTGHAAHGGAWKIAYADFVTAMMAFFLL
                     MWLLGSTSKGELQGIASYFSNPVKVSLMGGDGTGNSNSILPGGGRDLSKSAGQVDGGD
                     AERAAKQMWTQMAKEERERNEANRIQELQRKIQSLISSDPKLAEYGSQIQLETTLDGL
                     HIQIVDQQNRPMFDTGSALVKPYMSEILRGIGAALGDVENRIALAGHTDATPYGSGER
                     GYSNWELSADRANASRRELVVGGLPDNKLLRVEGLASSQLLRPEAPTDPINRRISIVV
                     LTEEAQERLMPASTPNSSLQNSPQVTKIPIESGR"
BASE COUNT          269 a          538 c          600 g          329 t
ORIGIN      
        1 ccgacgctgg acgagaaggc gtggcgggcg acggagccgc acacgccgaa tccccgggcg
       61 cggctggagg cggtggggga gctcaaccgc gcgggcatcc cgacgagcgt gctgatcgcg
      121 ccgctgatgc cgggcatcaa cgacgcgccg gagcaggtcg cgaagatcgt cgagctggcg
      181 acggaggccg gcgcgacctc gatcggcggc aacacgctgt tcctgcgcgg gtcggtgcgc
      241 accgtgttct tcgactggct gcgcgagcac cggccggatc tgctgccccg ctacgaagag
      301 ctctaccgcc gcggcgcgta cctgcccgaa gcccagcggc gcgacatcga gcgcgccgcc
      361 ggcgccccgt gggccggccg cggctaccag cagcgctgga agcaccgcgt gctcgaacgt
      421 cgccgcaccc tcgaacgcga ggcccgcgag cgggcggccg agaccttgtt cagtgcaatg
      481 gcgccgtctt cagcctcgtc ggcgtcggca tggccgatct ctttcaggag gttgcgcacg
      541 atgcggcgca tcgtggagaa gtcatcaacg atcaggaatt tcatcggggt ggacatgcag
      601 gcctccgtcg gtgcggttgg agcagaaatg gggcgaaaaa ggggcggata gggggcagcg
      661 gcgactcagc gcccgctttc tatgggaatc ttcgtcactt gtggcgaatt ctgaagggat
      721 gaattgggcg tggaggctgg catcagccgt tcctgcgctt cctccgtcag aaccacgatg
      781 ctgatgcggc ggttgatcgg gtcggtgggt gcttccggac gcagcaactg gctggaggcc
      841 agaccttcca cgcgcagcag cttgttgtcg ggcaggccgc cgaccaccag ttcacggcgc
      901 gaggcgttgg cacggtcggc cgagagttcc cagttgctgt agccgcgctc accgctgcca
      961 tagggggtgg cgtcggtgtg gccggccagc gcgatgcggt tctccacatc acccagcgcg
     1021 gcaccaatgc cacgcaggat ttcgctcatg tacggcttca ccagggcgct gcctgtgtcg
     1081 aacatgggcc ggttctgctg atcaacgatc tggatgtgca ggccgtcgag cgtggtctcc
     1141 agctggatct gtgagccgta ttcggccagt ttcgggtcgc tggagatgag cgactggatc
     1201 ttgcgctgca gttcctgaat gcggttcgcc tcgttgcgct cgcgttcttc cttggccatc
     1261 tgcgtccaca tctgcttggc ggcgcgctcg gcgtcaccgc cgtcaacctg gccggcggac
     1321 ttgctcaagt cgcgcccgcc gccgggcagg atgctgttgc tgttgccggt accgtcgcca
     1381 cccatgagcg agaccttcac cggattgctg aagtagctgg caataccttg cagttcaccc
     1441 ttggaggtgg aacccagcaa ccacatgagc agaaaaaacg ccatcatggc cgtcacgaag
     1501 tcggcgtagg cgatcttcca ggcacctccg tgtgcggcgt gcccggtctt cttgatgcgt
     1561 ttgatgatga tgggctgtag ctttttgccg tcggccatgg cggtactccg ttgcgtgcgg
     1621 tgtcagtgcg atgatgaatg cttcaggctc aggccggtgc cttcttgcct ttgacgtggc
     1681 cttcgagttc gctgaagctg gggcgctcgg tggactgcag caccttgcga ccgaat
//
LOCUS       DATAIQ010000567         2143 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_122190, whole genome shotgun sequence.
ACCESSION   DATAIQ010000567 DATAIQ010000000
VERSION     DATAIQ010000567.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2143)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2143)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2143
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_122190"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..571)
                     /locus_tag="VHN20_09415"
     CDS             complement(<1..571)
                     /locus_tag="VHN20_09415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726023.1"
                     /translation="MIASPIRIAALALGSMLSLATASLAQTSEPFYKGKRLTVLANYA
                     AGGPTDVEARLLARHLSKHIEGNPTIIVQNMEGAGGLIASNYLAEVAPKDGTVVGYLT
                     GATWRYITDPDRYRVDFKTYEFVGYQPGTTVYFMRADVPPGMKQPSDIAKAQGLVAGG
                     LNADNSKDLLIRLTLDMLGVPYKYVTGYVS"
     gene            complement(626..1783)
                     /locus_tag="VHN20_09420"
     CDS             complement(626..1783)
                     /locus_tag="VHN20_09420"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HEX2726024.1"
                     /translation="MTEFGLPEELRMFKTELRRFVDSEMIPVERQTTDGEDLKPEFRE
                     RFEARAKDLGIWMMDVPEQYGGPGLSVLARAVVWEELARTIALPSRGEGIVGPTVRAI
                     LYSLTGEMKEKYLLPVLRGEKRACFAQTEPDAGSDPGGMRTTAVRDGDTYVINGVKRF
                     ISGAHKADFMQLMAATDRSKGSRGGISCFLVDMDTPGVRLTTSYETMMGDRPWEIVLD
                     NVRVPASHMVGEEGQGFGLAQKWLGTGRIKHGARALGVAERCLEMATAYAKQRVTFGR
                     PLSDRQGIQFKLADMYIDLQAARLLVHKAATRLDAGDDAREDAYVCKYFADEMAFRAA
                     DMCMQIHGGIGLTTDLPIEKMWRQQRSYRITEGASEVMKMVIARHVLKTYG"
     gene            complement(1780..>2143)
                     /locus_tag="VHN20_09425"
     CDS             complement(1780..>2143)
                     /locus_tag="VHN20_09425"
                     /inference="COORDINATES: protein motif:HMM:NF024938.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="acetate--CoA ligase family protein"
                     /protein_id="HEX2726025.1"
                     /translation="ILGARNDELYGPMLLAGSGGVLVELVKDAALRLLPVSDTDVTTM
                     IDELELNRLLAGFRGRPPADRSALEAAALGLARFFLDHRDRIADIEINPLLVRPAGRG
                     AVAVDVRVLWRDDAGRGA"
BASE COUNT          323 a          720 c          733 g          367 t
ORIGIN      
        1 tgctcacgta tcccgtcacg tatttgtagg gcaccccgag catgtcgagc gtcaggcgga
       61 tgaggagatc cttcgagttg tcggcgttga gcccgcccgc gacgagaccc tgcgccttgg
      121 cgatgtcgct cggctgcttc atgccgggcg gtacgtcggc gcgcatgaag tagacggtcg
      181 tgccgggctg gtagccgacg aactcgtagg tcttgaagtc gacgcggtag cgatccgggt
      241 cggtgatgta gcgccaggtc gctccggtga gatagccgac cacggtcccg tccttgggcg
      301 cgacctcggc aaggtagttg gaggcgatga ggccgccggc gccctccatg ttctgcacga
      361 tgatcgtggg attgccctcg atgtgcttgg acagatgccg cgcgagaagc cgcgcctcca
      421 cgtcggtcgg gccgccagcc gcataattgg cgagaaccgt cagccgcttg cccttgtaga
      481 agggctcgct ggtttgagcc agcgacgcgg tcgcgaggct gagcatcgaa ccgagggcga
      541 gggccgcgat gcggatcggt gacgcgatca tgtgttcctc cgtgtgttct tcgaactttg
      601 cgatgccatt gtcccgggcg cccggtcagc cgtaggtctt cagcacatgg cgggcgatga
      661 ccatcttcat gacctcgctc gccccttcgg tgatccggta gctgcgctgc tggcgccaca
      721 tcttctcgat cggaaggtcg gtcgtcaggc cgatgccgcc gtggatctgc atgcacatgt
      781 cggcggcgcg gaacgccatc tcgtcggcga aatacttgca cacataggcg tcctcgcgcg
      841 catcgtcgcc ggcgtcgagc cgggtcgccg ccttgtgcac gagcagccgc gccgcctgca
      901 ggtcgatata catgtcggcg agcttgaact ggatgccctg gcggtcgctg agcgggcgcc
      961 cgaaggtgac gcgctgcttg gcataggcgg tcgccatctc gaggcagcgc tcggcgacgc
     1021 cgagggcgcg cgcgccgtgc ttgatgcggc ccgtgccgag ccatttttgc gcgaggccga
     1081 agccctgccc ttcctcgccg accatgtggc tggccggaac gcgcacgttg tcgagcacga
     1141 tctcccacgg ccggtcgccc atcatggtct catacgacgt cgtcaggcgg acgcccggcg
     1201 tgtccatgtc gacgaggaag caggagatgc cgccgcgcga gcctttgctg cggtccgtcg
     1261 cggccatcag ctgcatgaag tcggccttgt gggcgccgga gatgaagcgc ttgacgccgt
     1321 tgatgacata ggtgtcgccg tcgcgcacgg cggtggtgcg catgccgccc ggatcggagc
     1381 ccgcgtccgg ctcggtctgc gcgaagcagg cgcgcttttc gccgcgcagg accggaagca
     1441 ggtatttttc cttcatctcg ccggtgagcg aatacaggat cgcccgcacc gtcggcccga
     1501 cgatgccttc accgcgagac ggcagggcga tcgtgcgcgc cagctcctcc cacaccaccg
     1561 cgcgcgccag gacggagagc ccgggcccgc catattgctc gggcacgtcc atcatccaga
     1621 tgccgaggtc cttggcgcgc gcctcgaagc gctcgcggaa ttcgggcttc aggtcttcgc
     1681 cgtcggtcgt ctggcgctcg accgggatca tctcgctgtc gacgaagcgg cgcagctccg
     1741 tcttgaacat gcgcagctct tcgggaaggc caaactccgt cacgcccccc tccccgcatc
     1801 atcgcgccac aggacccgga catcgacggc gaccgcgccg cggccggcgg ggcgcaccaa
     1861 caacgggttg atctcgatgt cggcgatgcg gtcgcggtga tcgaggaaga agcgggcaag
     1921 ccccagcgcc gccgcctcga gcgccgaccg gtcggccggc gggcggccgc ggaagccggc
     1981 cagcagccgg ttcagctcga gctcgtcgat catggtggtc acgtccgtgt ccgacaccgg
     2041 caacagccgc agcgcggcgt ccttgaccag ctcgaccagc accccgcccg agccggcgag
     2101 cagcatcggc ccataaagct cgtcgttgcg ggcgccgagg atg
//
LOCUS       DATAIQ010000568         2339 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_197915, whole genome shotgun sequence.
ACCESSION   DATAIQ010000568 DATAIQ010000000
VERSION     DATAIQ010000568.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2339)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2339)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2339
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_197915"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..678)
                     /locus_tag="VHN20_09430"
     CDS             complement(<1..678)
                     /locus_tag="VHN20_09430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012564310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEX2726026.1"
                     /translation="MTRVLYDLAGADPAVRFSPYCWRTKLALAHKGLSVETVPWRFSD
                     KEALAFSGQGRVPVLVDGEKTVTDSWAIALYLDETYPDRPSLFGGAAVGATRFVNAWA
                     DTTLNGGISRLIVSDIAAIIDDKDKAYFHESRERRFGMPLEQVTAGRAERVTAFRETL
                     LPLRQTLSAQAYLGGAEPTYADYIVLGSFQWARCCSRFELLEPGDPVAGWRERMLDRF
                     DGLARNAA"
     gene            complement(675..1379)
                     /locus_tag="VHN20_09435"
     CDS             complement(675..1379)
                     /locus_tag="VHN20_09435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011443020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione binding-like protein"
                     /protein_id="HEX2726027.1"
                     /translation="MIDLYYWTTPNGHKVTMFLEEAGLPYRIHPINIGKGEQFAPEFL
                     AVSPNNRIPAIVDNEPAGGGAPVSVFESGAILLYLAEKTGRFIATDLRGRADVLQWLF
                     WQMGGLGPMAGQAHHFRIYAPEKIDYAVKRYTDECNRLYGVLNKRLSDRAFVAGNDYT
                     IADMASYPWIVPHERQGQNLDDFPNLKRWFETIKARPATMRAYDMVQKINPQAGKPMG
                     DNEKKVMFGQTAAVVR"
     gene            1664..2311
                     /locus_tag="VHN20_09440"
     CDS             1664..2311
                     /locus_tag="VHN20_09440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018045784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1007 family protein"
                     /protein_id="HEX2726028.1"
                     /translation="MRTNIIARRLVLPALLLAGAPALAHPHVWVTTKAELVFGADGKV
                     TAVNHRWTFDAAYSAVVTQGLDKNKDGKLTADELQELAKVNTESLHEFDYFTMLKANG
                     AKQAFNAPINPEMTFENGAVTLSFQLPLRAPARNKMLALEVYDPTFFVAFSIAEGDDA
                     VKLASAPQGCAKTITRPKPIEAAQQQKLSEAFFEALTASSAYGAGQASRVIVACP"
BASE COUNT          379 a          764 c          813 g          383 t
ORIGIN      
        1 cgcggcgttg cgggcgaggc catcgaagcg gtcgagcatg cgctcccgcc acccggccac
       61 ggggtcgccg ggttcgagca gctcgaagcg gctgcagcag cgcgcccact ggaagctgcc
      121 gagcacgatg taatcggcat aggtcggctc ggcgccgccg agataggcct gcgccgacaa
      181 ggtctggcgc agcggcagca gcgtctcgcg aaacgccgtg acgcgctccg cgcgcccggc
      241 ggtgacctgc tcgaggggca tgccgaagcg ccgctcccgg ctttcgtgga aatacgcctt
      301 gtctttgtcg tcgatgatgg cggcgatgtc ggacacgatc agccggctga tgccgccgtt
      361 gagcgtggtg tcggcccagg cattgacgaa gcgggtggcg ccgacggcgg cgccgccgaa
      421 cagggagggc cggtcaggat aggtttcgtc gaggtagagg gcgatggccc acgagtcggt
      481 caccgtcttc tcgccgtcga cgagaaccgg cacgcgcccc tgtcccgaga aggcgagcgc
      541 ctccttgtcg ctgaagcgcc acggcaccgt ctcgacgctg aggcccttgt gggccagcgc
      601 cagcttcgtg cgccagcaat acgggctgaa gcgcacggcc gggtcggcgc cggccagatc
      661 gtagaggacg cgcgtcatcg cacgacggca gccgtctggc cgaacatcac cttcttctcg
      721 ttgtcgccca tcggcttgcc cgcctgcggg ttgatcttct gcaccatgtc gtaggcgcgc
      781 atggtcgcgg ggcgcgcctt gatggtctcg aaccagcgct tgagattcgg gaagtcgtcg
      841 agattctggc cctgccgctc atgcggcacg atccatggat aggacgccat gtcggcgatc
      901 gtgtagtcgt ttccggccac gaaggcgcgg tcggacaggc gcttgttcag gacgccgtag
      961 agccggttgc attcgtcggt atagcgtttc accgcgtagt cgatcttctc gggcgcatag
     1021 atgcggaaat ggtgcgcctg gccggccatc ggcccaaggc cccccatctg ccagaacagc
     1081 cattgcagca cgtcggcgcg gccccgcagg tcggtggcga tgaaccgccc cgtcttctcg
     1141 gcgagataaa gcaggatggc gccggactcg aagaccgaca cgggcgcgcc gccgccggcg
     1201 ggctcgttgt cgacgatcgc cgggatgcgg ttgttcggcg agaccgccag gaattcgggc
     1261 gcgaactgct cgcccttgcc gatgttgatc gggtggatgc ggtacgggag cccggcctcc
     1321 tcgaggaaca tcgtgacctt gtggccgttc ggcgtcgtcc agtaatacag atcgatcatc
     1381 ggcatccctc tcggatcagc tgggcagatc ggccattccc tagcggcgcg ggcgggggaa
     1441 cagaagcccc gccggctccg ccggccgatc acaggcccga gagcgccgga gcttgaggcg
     1501 cggtgatccg gccacgctcc ggttgtgttt cggcggaggc gcgtcgcggc ctcgcggctc
     1561 tgccgcctcg ctttcgccgc actgcgcgtc gatgtgagat gcgggcggcg gcgtgtctcg
     1621 aacagtttct gcaacgacgt cccgtccgga tgcgggggca cgaatgagaa cgaacatcat
     1681 cgcgaggcgg ctcgtgctgc cggcgctact gctcgctggc gcgccggcgc tcgcccatcc
     1741 ccatgtctgg gtcacgacca aggccgagct ggtattcggg gccgacggca aggtcaccgc
     1801 ggtgaaccat cgctggacct tcgatgccgc ctattcggcg gtcgtcaccc agggcctcga
     1861 caagaacaag gatggcaagc tgacggcgga cgagttgcag gagctcgcca aggtgaacac
     1921 cgagtcgctg cacgagttcg actatttcac gatgctcaag gcgaatggcg cgaagcaggc
     1981 cttcaacgcg ccgatcaatc cggaaatgac cttcgagaac ggcgcggtga cgttgtcgtt
     2041 ccagctgccg ctgagagcgc cggcgcgcaa caagatgctg gccctggaag tctacgaccc
     2101 gaccttcttc gtcgccttca gcatcgccga gggcgacgac gccgtgaagc tcgccagcgc
     2161 gccgcagggc tgcgccaaga cgatcacgcg cccgaagccg atcgaggcgg cgcagcagca
     2221 gaaattgtcg gaggcctttt tcgaggccct gaccgcgtcg tccgcgtatg gcgccgggca
     2281 ggcgagccgg gtgatcgtcg catgtccgta agcgcgcaaa ccctgacgcc ggcgccgac
//
LOCUS       DATAIQ010000569         1665 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_335976, whole genome shotgun sequence.
ACCESSION   DATAIQ010000569 DATAIQ010000000
VERSION     DATAIQ010000569.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1665)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1665)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1665
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_335976"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1665
                     /locus_tag="VHN20_09445"
     CDS             <1..>1665
                     /locus_tag="VHN20_09445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009494669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HEX2726029.1"
                     /translation="KGRDAGANEAVVKKLAEVGALVARGRLKHQYPHSWRSKAPLIFR
                     NTPQWFIAMDKAIGSSSTGRDGTALGTVMWPKNDPAPQDTLRHRALTAIKTVQWVPAT
                     GENRITGMIENRPDWVVSRQRAWGVPIAVFVKKGSNEILKDERVNKAIADAFAEEGAD
                     AWFKDADGARFLTPFGFDPAGYEKVNDILDVWFDSGSTHAFTLEVREDLKARRKADGG
                     PDTVMYLEGSDQHRGWFHSSLLESCGTRGRAPFDIVLTHGFVLDERGEKMSKSKGNVT
                     APQDVIKDSGADILRLWVAASDYSDDLRIGREILKTFVETYRKLRNTIRWMLGSLHHF
                     REEDRVQPEAMPELERFILHRLAELDQDIRGAYAGFDYKRVVALLNSFMTSDLSAFYF
                     DIRKDALYCDPISGTRRKSALTVIDVTFRCVATWIAPILAFTAEEAWLSRHPSEDGSV
                     HLETFPAVPAAWRDEALAHKWATIRMIRRVVTGALEVERAHKRIGSSLEAAPIVYISA
                     PRLMPALDGVDFAEICITSSIEVRLDPSPPAKAFRVDESGDIREVAV"
BASE COUNT          301 a          537 c          535 g          292 t
ORIGIN      
        1 aagggccgcg atgccggcgc caacgaggcc gtggtcaaga agctcgccga ggtcggcgcg
       61 ctcgtcgcgc gcgggcggct caagcaccag tatccgcatt cctggcgatc gaaggcgccg
      121 ctcatcttcc gtaacacgcc ccagtggttc atcgccatgg acaaggcgat cggatcgtcc
      181 tcgaccggga gggacgggac tgctctcggc acggtgatgt ggcccaagaa cgatccggcg
      241 ccgcaagaca ccctccgcca ccgcgcgctc acggccatca agaccgtgca gtgggtgccg
      301 gcgaccggcg agaaccgcat caccgggatg atcgagaatc ggccggactg ggtcgtgtcg
      361 cgtcagcgcg cctggggcgt gcccatcgcg gtctttgtga agaagggcag caacgagatc
      421 ctgaaggacg agcgcgtcaa caaggcgatc gccgacgcgt tcgcggagga gggcgccgat
      481 gcctggttca aggacgccga cggggcgcgc ttcctgactc cgttcggctt cgatccggcc
      541 ggttacgaga aggtgaacga catcctcgac gtctggttcg attcgggctc gacgcacgca
      601 ttcacgcttg aggtgcgcga agacctgaaa gcgcgccgca aggccgacgg cgggccggat
      661 acggtcatgt acctggaggg gtccgaccag caccgcggct ggttccattc gtcgctcctg
      721 gagagctgcg gcacgcgcgg acgcgcgccc tttgatatcg tcctgacgca cggcttcgtc
      781 ctcgacgagc gcggcgagaa gatgtcgaaa tccaagggca acgtcacggc gccgcaggac
      841 gtaatcaagg acagcggcgc cgacatcctc cgcctttggg tcgccgcgtc cgactactcc
      901 gacgatctgc gcatcgggcg cgaaatcctg aaaaccttcg tcgagacgta tcgcaagctg
      961 cgcaacacca tccgctggat gctcggctcg ctgcaccact tccgcgagga agatcgagtt
     1021 cagccggagg cgatgcccga actcgagcgc ttcatcctgc accggctcgc cgagctcgac
     1081 caagatatcc gcggcgccta tgcgggcttc gactacaagc gcgtggtggc gctcctcaat
     1141 tccttcatga cgagcgacct ctcggccttc tatttcgaca tccgcaagga cgcgctctac
     1201 tgcgatccga tctcgggtac gcggcgcaag agcgcgctga ccgtcatcga cgtgaccttc
     1261 cgctgcgtcg cgacctggat tgcgccgatc ctcgccttca cggccgaaga ggcttggctg
     1321 tcgcgccatc cgtccgagga cggctccgtc cacctcgaga cctttccggc tgtgccggcg
     1381 gcttggcgcg acgaggcgct ggcacacaaa tgggccacga ttcgtatgat ccggcgggtc
     1441 gttactgggg cacttgaggt tgaacgtgct cacaagcgta tcggatcaag ccttgaggcg
     1501 gctcctatcg tctacatcag tgccccacgg ctaatgccgg ctttggacgg tgttgatttc
     1561 gccgaaatct gcatcacctc gtcaatagag gttagacttg atccgagtcc tccggctaag
     1621 gcattccgcg ttgatgagag cggggatatc cgcgaagtgg cggtg
//
LOCUS       DATAIQ010000570         2243 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_335986, whole genome shotgun sequence.
ACCESSION   DATAIQ010000570 DATAIQ010000000
VERSION     DATAIQ010000570.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2243)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2243)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2243
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_335986"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..845)
                     /gene="rnd"
                     /locus_tag="VHN20_09450"
     CDS             complement(<1..845)
                     /gene="rnd"
                     /locus_tag="VHN20_09450"
                     /EC_number="3.1.13.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015951340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016891 - RNA endonuclease activity,
                     producing 5'-phosphomonoesters [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease D"
                     /protein_id="HEX2726030.1"
                     /translation="MDMITSTDALAEACARLAAHPFVTVDTEFMRETTYYPKLCLIQM
                     AGPDEGFLIDPLAPGMDLAPFLSLMADERVTKVFHSARQDLEIIWNLGRLVPHPLFDT
                     QVAAMVCGYGDSVSYEQLVNDVAKARIDKSSRFTDWSRRPLSDAQLTYALSDVTHLVT
                     VYQALSAELDRTNRSGWLHEEMAILTSPDTYRADPANAWQRLSGRMRKAREIAVLMEV
                     AAWREQEAQNRDVPRNRVLKDEAAIDVAVSAPRSAEALGRLRTIPNGFERSRTGAEIL
                     AAVERG"
     gene            complement(904..1188)
                     /locus_tag="VHN20_09455"
     CDS             complement(904..1188)
                     /locus_tag="VHN20_09455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726031.1"
                     /translation="MVPLEGAYELSYCDEAGNPSRRRVIARELKIGQGKTLLGGIDME
                     SDHYRGFRADRIESLVDGETGEIVCRNVLDWLLKRAMRKGKEHRRAASNA"
     gene            1528..>2243
                     /locus_tag="VHN20_09460"
     CDS             1528..>2243
                     /locus_tag="VHN20_09460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012456189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid--tRNA ligase-related protein"
                     /protein_id="HEX2726032.1"
                     /translation="MHRYRTHTCGELRETHVGESVRLSGWCHRIRDHGGVLFIDLRDH
                     YGITQCVADPDSPAFKAADSVRSEWVVRIDGKVRKRPPGTENPDLPSGMVEVFITDLE
                     VLGPAGELPMPVFGEHDYPEETRLRYRFLDLRRDKLHANIMKRGAIIDSIRRRMKEGG
                     FFEFQTPILTASSPEGARDFLVPSRLHPGKFYALPQAPQQFKQLIMIAGFDRYFQIAP
                     CFRDEDARADRSPGEFYQLD"
BASE COUNT          340 a          760 c          755 g          388 t
ORIGIN      
        1 ccgcgctcga ccgccgccag gatctcggcc cccgtcctgg agcgctcgaa gccgttcggg
       61 atcgtgcgca ggcgccccaa cgcctcggcg ctgcgcggcg ccgagacggc gacgtcgatc
      121 gccgcctcgt ccttgaggac gcgattgcgc gggacgtcgc ggttttgcgc ctcctgctcg
      181 cgccaggcgg caacctccat caggacggcg atttcgcggg ccttgcgcat gcgcccggac
      241 aggcgctgcc aggcattggc ggggtccgcc cggtaggtat cgggcgaggt caggatcgcc
      301 atctcctcgt gcagccagcc ggagcggttg gtgcggtcga gctcggcgct cagggcctgg
      361 tagaccgtga ccaggtgggt cacgtcggac aaggcatagg tgagctgggc gtcgctgagg
      421 ggccgccgcg accagtccgt gaagcgcgac gacttgtcga tgcgggcctt ggccacgtcg
      481 ttgacgagct gctcgtagga gaccgaatcg ccgtagccgc acaccatcgc cgccacctgc
      541 gtgtcgaaca gcggatgcgg cacgagccgg ccgagattcc agatgatctc gagatcctgg
      601 cgggccgaat gaaagacttt cgtgacccgc tcgtcggcca tcagggacag gaagggcgcg
      661 aggtccatcc ccggcgcgag cgggtcgatc aggaaaccct cgtcggggcc ggccatctgg
      721 atcaggcaca gcttcggata ataggtggtc tcgcgcatga attcggtgtc gacggtgacg
      781 aaggggtgcg ccgccaggcg cgcgcaggcc tccgcgaggg cgtcggtcga ggtgatcatg
      841 tccatggggg cgctatagcc aactcgttgc ggctccgcga cccccaagtc cgtggtcctc
      901 aggtcaggcg tttgatgcag cacgccggtg ctcctttccc ttgcgcatgg cgcgcttcaa
      961 tagccagtcg aggacattgc ggcagacgat ctccccggtc tctccgtcga ccagggattc
     1021 gatgcggtcg gcccgaaagc cgcgataatg gtcgctctcc atgtcgatgc cgcccagcag
     1081 ggtcttgccc tgcccgatct tgagctcgcg cgcgatcacc cgccgccggc ttggatttcc
     1141 ggcctcgtcg caataggaca gctcgtaggc gccctcgagc gggaccacct gccacgctcc
     1201 aggggcctcg gaaaccgccg ccggcggcgg gacgcgaccg gggccggtgg cggctttctc
     1261 gttattggtc atcgcctcga tatgggtttt tgccgccgat ttttccagcg cccacggggg
     1321 tgtcgcagcg cccccgccgt tttcccccgg accggcggcg aatggcagac gcaggccggc
     1381 ccggccgtgg tgacgccggc ggtgatctcg cggcgctgcg ccgcagcccg ggccgggtcc
     1441 atcctgtgtg gtcaccgaaa acgcttgtgt cgcttgacat catcgaccct gcgtgaatgg
     1501 tgcgccccgt ctcacccgag ccctttcatg catcgatatc ggacccatac ctgcggcgag
     1561 ctgcgcgaaa cccatgtcgg ggagagcgtg cgcctgtccg gctggtgcca ccgcattcgc
     1621 gaccacggcg gcgtgctgtt catcgacctg cgcgatcatt acgggatcac gcaatgcgtc
     1681 gccgacccgg attcgccggc cttcaaggcg gccgatagcg tgcgctcgga atgggtagtc
     1741 cggatcgacg gcaaggtgcg caaacgtccg ccgggaacgg aaaacccgga cctgccgagc
     1801 ggcatggtcg aggtgttcat cacggatctt gaggtgctcg gccccgcggg cgagctgccc
     1861 atgccggtct tcggggagca tgattatccc gaggagacgc ggctgcgtta ccgcttcctc
     1921 gatctgcgcc gcgacaagct gcacgccaac atcatgaagc gcggcgcgat catcgattcg
     1981 atccgccggc gcatgaagga gggcggcttc ttcgagttcc agacgccgat cctgaccgcg
     2041 tcctcgcccg aaggggcgcg cgacttcctg gtcccctcgc gcctgcatcc gggaaagttc
     2101 tacgcgctgc cgcaggcccc gcagcagttc aagcagctga tcatgatcgc gggcttcgat
     2161 cgctacttcc agatcgctcc ctgcttccgc gacgaggatg cgcgcgccga ccgctcgccc
     2221 ggcgagttct atcagctcga cat
//
LOCUS       DATAIQ010000571         5812 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_59419, whole genome shotgun sequence.
ACCESSION   DATAIQ010000571 DATAIQ010000000
VERSION     DATAIQ010000571.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 5812)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5812)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5812
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_59419"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1016)
                     /locus_tag="VHN20_09465"
     CDS             complement(<1..1016)
                     /locus_tag="VHN20_09465"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEX2726033.1"
                     /translation="MDLRTPARTDQTPSPTGGALPTPDARTRRISRLVFAGAVALFAL
                     WVARPYITALAWAVVIAIAVWPLYVRFAARRPGGRRVVAPLIFTLATALALAIPILVA
                     MVEIGREAQTIIEWLNEAQQSGVRLPDWVARVPIVGEHLDRWWASHLADPNAIGSFIS
                     ELGGDALRTLPTSLGWPLLHGLFLALLTFMTLFLILRDGGRIGTRLLDVADRWLGGPG
                     ERLAEKMITAVRGTVNGTVLVAVAEGALIGIGYVWAGVPHAVLFSLLTMAVAMLPFGA
                     WFAFTAAALLLLGQGGGGLTAAVVWGWGAIVMLIGDNFVQPGLIGGAARLPFLWVLIG
                     IFGG"
     gene            complement(1166..2143)
                     /locus_tag="VHN20_09470"
     CDS             complement(1166..2143)
                     /locus_tag="VHN20_09470"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEX2726034.1"
                     /translation="MILTRRHTLGLAAGALLAPVVARAQTFPTRPVTIVVPYPAGGPT
                     DAIARLVAQELAAPLGQSVIVRNEAGASGAVGTRSVARAEPDGHVIVFGNNQTHGNNM
                     FLLKEPGYDAVRDFAPLAGVGAFEHVFVVRKDLAVATINDLVAMARKDPGGLNYGSTG
                     IGSGSHLSTELFMVRTGIRMTHVPFRGAAPLVQELMGGRIDVSNSTLPSVLGQIQSGD
                     IRAIAISSPERNPVLPNVPTLREHGITGADAESWTAFFAPVATPSPVLDRLSREIIAI
                     LEKPAVGEAITRMGFSLKVRDPAAFRPYLAEEIKTWGEIIRLAGVKQEG"
     gene            complement(2159..2608)
                     /locus_tag="VHN20_09475"
     CDS             complement(2159..2608)
                     /locus_tag="VHN20_09475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018327703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1772 domain-containing protein"
                     /protein_id="HEX2726035.1"
                     /translation="MLTGLGALVIAAAFTGAAVYINVAEQPARLGLDDRSLLAQWKPS
                     YGRGLPMQAGLALIGSVLGVAAWLQLGGWQWLAGAMLLVANWPYTFLVVLPTNKGLEA
                     IEPAAAGPESRLLIERWGMLHAVRGVLGALSTGMFLWAALERLSVNI"
     gene            2731..3933
                     /locus_tag="VHN20_09480"
     CDS             2731..3933
                     /locus_tag="VHN20_09480"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006316372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HEX2726036.1"
                     /translation="MAFLADVLSRVKPSATIAMTQKARDLKNKGRDVISLSVGEPDFD
                     TPDHIKEAAVAAIRRNETRYPPVSGIVPLREAIAKKFKRENGLDYKPAQTIVSTGGKQ
                     VLYNALLATLNPGDEVIIPAPYWVSYPDMVGLCGGTPVVVDATLEDNFKLQAGPLEKA
                     ITPKTKWIILNSPSNPSGAAYTREEMKAITDVLVRHPHVWVMTDDMYEHLVYGDFEFV
                     TPAQVEPSLYERTLTVNGVSKAYAMTGWRIGYAGGPEHLIKAMDFVQSQQTTGACTIA
                     QWAAVEALDGPQDHLPRFRRAFEERRDLVVSMLNQTKYLKCPTPEGAFYVYPSCAEAI
                     GRKAPSGKTIATDEDFVSELLEAEGVAAVHGSAFGLGPNFRISYATSNAVLEEACNRI
                     QRFCGALR"
     gene            3983..4672
                     /locus_tag="VHN20_09485"
     CDS             3983..4672
                     /locus_tag="VHN20_09485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1345 domain-containing protein"
                     /protein_id="HEX2726037.1"
                     /translation="MPKEGDRAWWSPPQRWGFLTVVSSRPRLIVSTIAGVVSWFLWPA
                     AWAATTRLVLAWDVTSFLYLVLAWAMFARSTSDDLHRRASAEDEGAVAVLAFTVVAAA
                     ASLFAIGAELAGMRGGGAEAAGARIGVAVGTVLCSWFFLHTIFALHYAHVDYDSKTHA
                     WPLKFPGSDAPDYWDFLYFSFNLGAAAQTSDVVILSSSLRRVVLAHTIVSFLFNTTVL
                     ALAVNVGAGLL"
     gene            4901..5380
                     /locus_tag="VHN20_09490"
     CDS             4901..5380
                     /locus_tag="VHN20_09490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012114727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF992 domain-containing protein"
                     /protein_id="HEX2726038.1"
                     /translation="MLRRLISCAVLAAAGAAIAPAAQAQNVQAGTLNCALSGSVGMII
                     TSLRDLTCTFTNSRGEAEVYVGSIRRFGLDLGVTAGGQMVWAVFAPSGRYSRGALAGN
                     YSGASAEASVAAGLGANVLVGGSNRSFALQPLSVQGQAGLNVAVGVVDLELQAARVR"
BASE COUNT          950 a         2000 c         1960 g          902 t
ORIGIN      
        1 atgccgccga aaatcccgat caacacccac aggaacggca ggcgcgccgc tccgccgatc
       61 aggcccggct gaacgaaatt gtcgccgatc agcatgacga tggcgcccca gccccacacg
      121 acggcggcgg tgagcccgcc acccccctgc ccgagcagca gcagggctgc cgcggtgaaa
      181 gcgaaccatg cgccgaacgg cagcatggcg acggccatgg tcagcaggga aaacagcact
      241 gcgtgcggca cccccgccca gacgtagccg atgccgatca gggcgccctc ggcgaccgcc
      301 acgaggaccg tgccgttgac ggtgccgcgc acggcggtga tcatcttctc ggcgagacgc
      361 tcgcccgggc cgccgagcca gcggtcggcc acgtcgagca ggcgcgtgcc gatcctgccg
      421 ccgtcgcgca agatcaggaa cagcgtcatg aacgtgagga gcgcgaggaa gaggccgtga
      481 aggagcggcc agcccagcga cgtcggcagc gtgcgaagcg catcgccgcc gagctcgctg
      541 atgaagctgc cgatggcgtt cggatcggca agatggctcg cccaccagcg gtcgagatgc
      601 tcgccgacga tcggcacgcg ggcgacccag tccggcaagc gcacgccgct ctgctgtgcc
      661 tcgttcagcc actcgatgat ggtctgggcc tcgcggccga tctcgaccat ggccacaagg
      721 atcggaatgg ccaaggccag agccgtcgcc agggtgaaga tcagcggggc gacgacgcgg
      781 cgcccgccgg gccgacgcgc cgcgaagcgg acgtaaagcg gccagacggc gatcgcgatc
      841 acgacggccc atgccagcgc cgtgatgtag gggcgcgcca cccacaacgc gaaaagcgcg
      901 accgcgccgg cgaagaccag ccgcgagatg cgtcgcgtcc gtgcatccgg tgtgggcagc
      961 gccccgccag tcggggaggg ggtttgatcg gtccgggcgg gcgtcctcaa atccacaagc
     1021 ttaatcctca cctcgagcgc gccggcgcgg gatgcatcaa gtcgacgtca acccgctctc
     1081 tttccctttg tttcacggga tcgcgcgaca accggctctg gtgccatgcc ggatcatgtc
     1141 cggtgccgcc tcgcggcggc cgggcttacc cctcctgctt gacgccggcg agccggatga
     1201 tctcgcccca ggtcttgatc tcctcggcga gatacggccg gaacgcggcg gggtcgcgga
     1261 ctttcaggct gaagcccatc ctggtgatcg cctccccgac cgccggcttc tcaaggatgg
     1321 cgatgatctc gcggctgagc cggtcgagga cgggcgaagg cgtcgccacc ggcgcgaaga
     1381 aggcggtcca ggattcggcg tcggcgccgg tgatgccgtg ctcgcgcagc gtcggcacgt
     1441 tcggcaagac cgggttgcgc tccgggctgg agatggcgat ggcgcgaatg tcgccgctct
     1501 ggatctggcc gagcacgctg ggcagggtcg agttcgacac gtcgatgcgc ccgcccatga
     1561 gctcctgcac gagcggggcc gcgccgcgga acggcacgtg cgtcatcctg atcccggtgc
     1621 gcaccatgaa cagctcggtc gagaggtgcg agccggagcc gattccggtc gagccgtagt
     1681 tcagcccgcc cgggtctttc ctggccatgg cgacgaggtc gttgatggtc gcgaccgcca
     1741 ggtccttgcg cacgacgaag acgtgctcga aggcgccgac cccggccagc ggggcgaaat
     1801 ccctgaccgc gtcgtagccc ggctccttga gcaggaacat gttgttgccg tgcgtctggt
     1861 tgttgccgaa cacgatcacg tggccgtccg gttcggcgcg cgccaccgaa cgcgtgccga
     1921 cggcgcccga ggcgccggct tcgttgcgca cgatcacgct ctggccaagc ggcgccgcaa
     1981 gctcctgcgc gacgagccgc gcgatggcgt cggtcgggcc gccggcaggg tagggcacca
     2041 cgatcgtgac gggccgcgtc ggaaacgtct gcgcgcgagc gacgaccggg gcaaggagcg
     2101 ccccggcggc caggccgagc gtgtggcgac gggtcagaat catccgtaat cctcgcgatc
     2161 agatgttgac agacagacgc tcgagcgcag cccacaggaa catgccggtc gagagggcgc
     2221 cgagaacgcc gcgaaccgcg tgcagcatgc cccatcgttc gatgagaagg cggctctccg
     2281 ggcccgccgc cgcaggctcg atcgcttcca ggcccttgtt ggtcggcagg acgacgagaa
     2341 acgtgtaggg ccagttggcg accagcagca tggcgccggc gagccattgc cagccaccga
     2401 gctgcaacca ggcggccacg ccgagaaccg aaccgatcag ggccagcccg gcctgcatcg
     2461 ggagcccgcg cccgtacgag ggcttccact gggcgagcag gctcctgtcg tcaaggccga
     2521 ggcgggcggg ctgctcggcg acgttgatgt agaccgctgc gccggtgaag gctgcggcga
     2581 tgacgagcgc gccgaggccg gtcagcattt ccgcttcctc agcacggcca tgcttcggcg
     2641 gcggggcttc cgccttgcgt gacgcgcccg gcccctctag ggtccggccc gctttcagcc
     2701 cgcttccaaa gcctttttcg gagaagtctc atggccttcc tggccgacgt cctgtcccgc
     2761 gtgaagccgt ccgcgaccat tgcgatgacg caaaaggcgc gtgatctcaa gaacaaaggg
     2821 cgcgacgtca tcagcctgtc ggtcggcgag ccggatttcg acacgccgga ccacatcaag
     2881 gaagcggccg tcgccgccat ccgccgcaac gagacccgct acccgccggt gtcggggatc
     2941 gtgcccctgc gcgaggcgat cgccaagaag ttcaagcgtg agaacggcct cgactacaag
     3001 ccggcacaga ccatcgtgtc cacgggcggg aagcaggtcc tctacaacgc cctgctcgcg
     3061 accctcaatc ccggcgacga ggtgatcatc ccggccccat actgggtgtc ctacccggac
     3121 atggtggggc tgtgcggcgg cacgcccgtg gtcgtcgacg cgacgctgga ggacaatttc
     3181 aagcttcagg cgggaccgct cgagaaggcg atcacgccga agaccaagtg gatcatcctc
     3241 aactcgccgt cgaacccgtc cggcgccgcc tatacgcgcg aggagatgaa ggcgatcacg
     3301 gacgtgctcg tgcgccaccc ccatgtctgg gtgatgaccg acgacatgta cgagcacctc
     3361 gtctacggcg acttcgagtt cgtcacgccg gcccaggtcg agccgtcgct ctacgagcgc
     3421 acgctcaccg tcaacggcgt gtcgaaggcc tatgcgatga ccggctggcg catcggctat
     3481 gcgggcgggc ccgagcacct gatcaaggcc atggatttcg tgcagagcca gcagacgacg
     3541 ggcgcgtgca cgatcgcgca atgggcggcc gtcgaggccc tggacgggcc gcaggaccac
     3601 ctgccgcgct tcaggcgcgc gttcgaggag cggcgcgacc tggtcgtgtc gatgctcaac
     3661 cagaccaaat acctcaaatg cccgacgccc gagggcgcgt tctacgtcta tccgtcatgc
     3721 gccgaggcga tcggacgcaa ggccccgtcg ggcaagacca tcgcgaccga cgaggacttc
     3781 gtgtccgagc ttctcgaggc ggaaggggtc gcggcggtgc acggctcggc cttcggcctc
     3841 ggcccgaact tccgcatctc gtatgcgacg tcgaacgcgg tgctcgaaga ggcgtgcaac
     3901 cgcatccagc gcttctgcgg cgcgttgcgc tagaccagcg cgccactggc tgccggctct
     3961 ccatcatccg gattggcagc aggtgcccaa ggaaggtgac cgagcctggt ggtcgccgcc
     4021 gcaaaggtgg ggcttcctga cggtcgtcag ctcgcggccc cgcctgatcg tctcgacgat
     4081 cgcgggcgtg gtttcctggt tcttgtggcc cgcggcgtgg gccgccacga cgcggctggt
     4141 cctggcctgg gatgtcacct cgttcctcta tctcgtcctc gcctgggcga tgttcgcgcg
     4201 ctcgacgtcg gacgacctcc accgccgcgc cagcgccgag gacgaaggcg cggttgccgt
     4261 gctggccttc accgtcgtgg ctgccgccgc aagcctgttc gcgatcggcg ccgagcttgc
     4321 cggcatgcgc gggggagggg ccgaggcggc gggcgcccgc atcggcgtcg ccgtcggcac
     4381 cgtcctgtgc tcgtggtttt tcctgcacac gatttttgcg ctgcattacg cgcatgtcga
     4441 ttacgacagc aagacgcacg cctggccgct gaaattcccc ggatcggacg cccccgatta
     4501 ttgggatttc ctctacttct cgttcaatct cggggccgcg gcccagacat ccgacgtggt
     4561 catcctgtcg agctccctgc gccgcgtcgt gctcgcccac acgatcgtca gcttcctgtt
     4621 caacacgacc gtgctggcgc tcgccgtgaa tgtcggcgcc ggactgctct gagcccgacc
     4681 ccgggcatgc acggcgagcc gatcttcgcc ctttttccgc tccgctgcgc tggccgggtg
     4741 gcgccgcgcg aagcctggct gtaagaaatt tcgcggcaag ccgcggttct ctcccggcta
     4801 tggagcggga tggcttcaag ctgaattttg atttcgcatg attgcttcgg cgaactggca
     4861 ctcactccgc cggaccatgc ccacggaaca ggagcgtaag atgttgcgta gattgatctc
     4921 ttgtgcggtg ctggcagctg ccggcgcggc catcgccccg gccgcacagg cccagaacgt
     4981 gcaggcggga acgctcaatt gcgcgctctc cggcagcgtc gggatgatca tcacgtcact
     5041 gcgcgacctg acctgcacgt tcaccaattc gcgcggcgag gccgaggtct atgtcggcag
     5101 catccgccgc ttcggtctcg acctcggcgt cacggccgga ggccagatgg tgtgggccgt
     5161 gttcgcgccg agcgggcgct acagccgcgg tgccctcgcg ggcaactaca gtggcgcctc
     5221 agccgaggcg agcgtcgccg ccgggctcgg cgccaacgtt ctcgtcggcg gctccaaccg
     5281 ctcgttcgcg ctgcagccgc tgtcggtgca aggccaggca ggcctgaatg tcgcggtcgg
     5341 cgtcgtcgat ctcgaattgc aggcggcccg cgtccgttga gcgcggggcg agcggcgaag
     5401 acgatcagcg gcagtcggca gtcggcaatc ggcagtcggt gattccgaga cgcccaacgc
     5461 gacgactgcc aactgcctac gcctgctgac ctattcgcca tccgcgctgg aaacccgata
     5521 cgacgactgc cgattgccga ctgcctattg ccgcactctt tgcgccggtc gccattccct
     5581 gctcgcctta taaagccctc ttgccttccg catccgacgg gaggacgatg cccgcaaagc
     5641 gccgacagaa gcgctggggg ttatggaggc aaggagcatg gctacaaacg gcagatcagc
     5701 catggggccc cggtgcgttg ccatcgtcgg cccctttcag agcggcaaga caacccttct
     5761 cgaatcaatc ctcgagcgga ccggcaccat cgagcgcgcc ggccgcgcag ct
//
LOCUS       DATAIQ010000572         2236 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_59463, whole genome shotgun sequence.
ACCESSION   DATAIQ010000572 DATAIQ010000000
VERSION     DATAIQ010000572.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2236)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2236)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2236
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_59463"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..276)
                     /locus_tag="VHN20_09495"
     CDS             complement(<1..276)
                     /locus_tag="VHN20_09495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726039.1"
                     /translation="MAEAALHYWNDYWDLREKECPCDVHFVEWLDAQGITDSAIYHFG
                     TGGHHHVGIECARPDRRNAVLGITAAPQEYDKYVELAIARPDVLRYYN"
     gene            complement(311..2026)
                     /locus_tag="VHN20_09500"
     CDS             complement(311..2026)
                     /locus_tag="VHN20_09500"
                     /inference="COORDINATES: protein motif:HMM:NF017775.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein/permease"
                     /protein_id="HEX2726040.1"
                     /translation="MGGWWRGASAGRAWFLSLSLAGLVIANIGLNVTVNAWNRMFFDA
                     LEKRDGGTLLFGVLAFAGLVAVIAAVGVLIVLTRETLQVRWREWLVARLTSLWLTRQR
                     YYRLSLAQVEPPNPEQRIADESRLSTEPVVDFAIGLLNALLSFAAFIGILWSVGGAIT
                     IPVGGTAITIPAYMTLAALAYGVVMSTLALKIGRPLVPGNIAKNEAEARYRFELTRLR
                     ENAESIALIKGEADERAILDRSYGRLVARWLAVVRLHGQLSWVTNASGALVPVVPVLL
                     ATPKFLSGELSLGAVTQLAAAFVQVQMAFAWLVDHYKPLAQWYASARRVMALVEAADE
                     LDRSLDGPTRGIALREAPDMGIALSQLTVCDRMGHVLIRDANAIITPGEKVLLVGDSG
                     IGKSTLVRAIAGLWPWGSGGITVPRGTGIAFVPQRPYLPLGTLREALLYPAHDVVFGD
                     DALGQTLDACGLRHLSHRLDHVERWDQILSSGERQRLAFARLFLHRPAVVILDEATSA
                     LDEDGQTALMNLLRERLQETTLISIGHRPGLETFHDRRLTLARHEDGARLTCERALQL
                     VRATG"
BASE COUNT          383 a          759 c          766 g          328 t
ORIGIN      
        1 gttgtagtat cgcagcacgt cgggacgcgc gatggcgagc tcgacatact tgtcatattc
       61 ctgcggggcg gccgtgatgc cgagcaccgc gttgcgccga tccggcctgg cgcattcgat
      121 gccgacgtga tgatggccgc cggtgccgaa atggtagatc gccgagtccg tgatgccctg
      181 ggcatcgagc cactcgacga aatgcacgtc gcacggacat tccttctcgc gcaggtccca
      241 atagtcgttc cagtaatgca gcgcggcttc ggccattcgc gtctaactcc tgatgtgttg
      301 cttggtttcg ctaacccgtc gcgcgcacga gctgcaacgc acgctcgcat gtcagccgcg
      361 ccccgtcctc gtggcgcgcg agcgtgaggc ggcggtcgtg gaaggtctcg agcccgggcc
      421 gatggccgat cgagatcagc gtcgtttcct gcaacctttc cctgagcagg ttcatgagcg
      481 ccgtctgccc gtcctcgtcg agcgccgacg tggcttcgtc gaggatcacg accgccggcc
      541 tgtgcaggaa caggcgcgcg aaggcgaggc gctggcgctc gccgctcgac aggatctggt
      601 cccagcgctc gacgtggtcg agccggtgcg acaggtgacg caggccacac gcgtcgagag
      661 tctggccgag cgcatcgtcc ccgaagacca catcatgggc gggatacagc agcgcctcgc
      721 gcagcgtgcc gagcggcagg tacggccgtt gcggcacgaa ggcgatgccc gtgccgcgcg
      781 gcaccgtgat gccgcccgag ccccagggcc ataggccggc gatggcgcgc accaaagtgc
      841 tcttgccgat tccggaatcg ccgacgagca gcaccttctc gccgggcgtg atgatggcgt
      901 tcgcgtcgcg gatcagcacg tggcccatgc ggtcgcatac ggtaagctgc gacagcgcga
      961 tgcccatgtc cggcgcctcg cgcaacgcga tgccgcgcgt cggcccgtcg aggctgcggt
     1021 cgagctcatc ggccgcctcg accagcgcca tgacgcgccg ggccgaggca taccattgcg
     1081 ccagcggctt gtagtgatcg accagccacg cgaacgccat ctgcacctgc acgaaggcgg
     1141 cggccagctg cgtgaccgcg ccgagcgaca gctcgccgga cagaaatttg ggcgtggcga
     1201 gaagcaccgg cacgaccggc acgagcgcgc cggacgcgtt ggtgacccag ctcagctggc
     1261 catgcagacg cacgacggcg agccaacggg ccacgagtct gccgtaggag cggtcaagga
     1321 tggcgcgctc gtccgcctct cccttgatga gggcgatgct ctcggcgttc tcgcgcaggc
     1381 gcgtcagctc gaagcggtaa cgcgcctcgg cctcgttctt ggcaatgttg ccgggcacga
     1441 gcggccggcc gatcttcaag gccagcgtcg acatcacgac gccgtaggcg agcgccgcga
     1501 gcgtcatata ggcaggaatg gtgatcgccg tgccgccgac cggaatagtg atcgcgccgc
     1561 cgaccgacca caggatgccg ataaaggccg cgaatgacag caaggcgttg agcaggccga
     1621 tggcgaaatc gacgaccggc tccgtcgaaa gacggctttc atcggcaatg cgctgctcgg
     1681 ggttcggcgg ctcgacctgc gcgaggctca gccggtagta gcgctggcgc gtcagccaca
     1741 aggacgtgag ccgtgcgacc agccactcgc gccagcgcac ctgcaaggtt tcccgcgtca
     1801 gcacgatcag cacgccgacg gcggcgatca ccgccacgag cccggcgaag gcgagcaccc
     1861 cgaacagcag cgttccgccg tcgcgctttt cgagcgcgtc gaagaacatg cggttccagg
     1921 cgttgacggt gacgttgagg ccgatattgg cgatcaccag ccctgccagg gagagcgaga
     1981 gaaaccaggc ccggccggcg ctcgccccgc gccaccatcc gcccacgagc cgcgcgaagg
     2041 cgcgggcgac gccgggatcg tagctcagga tacgcgggtc gtcgctcgag gacaggatgc
     2101 ggctctcaac gctcgggagc cgcccgacgg gagctcgccc acgcccaggc tactgaaagc
     2161 cgaccgcagc cgtcaaagcc attgagcggg gggcccgtcg aggcatgccc tgtcccgtcg
     2221 gtctggacgg cacggc
//
LOCUS       DATAIQ010000573         1747 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_306594, whole genome shotgun sequence.
ACCESSION   DATAIQ010000573 DATAIQ010000000
VERSION     DATAIQ010000573.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1747)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1747)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1747
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_306594"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(8..1687)
                     /gene="gcvPB"
                     /locus_tag="VHN20_09505"
     CDS             complement(8..1687)
                     /gene="gcvPB"
                     /locus_tag="VHN20_09505"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: protein motif:HMM:NF003346.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004375 - glycine dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0006546 - glycine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase
                     subunit GcvPB"
                     /protein_id="HEX2726041.1"
                     /translation="MQGDHAAQATAAAAPATFTGNKALAQIEPLIFEIGRMECTGVDL
                     DEPDAFEPRLGGLERTGSIGLPGLSEPEAMRHYVRLSQMNYGIDTGLFPLGSCTMKHN
                     ARLNERVARLPGFADVHPLQPVSTVQGALELMHELARYLTTLTGMPAVALSPKAGAHG
                     ELLGMMAIKAAIDAKGEGATRKIVLVPESAHGTNPATAALLGFRVKAVPARDDGWVHV
                     DDVKPLLGPHVAAIMLTNPNTCGLFEPQIIEIADALHAAGAYFYCDGANFNAIVGKVR
                     PGDLGVDAMHINLHKTFSTPHGGGGPGAGPVVLSERLAPYAPLPFVLASASPGEGEGR
                     EPNGWRRALSWKNLFRRSDAKRQIGGPEEGREPPFALIEHERDAEGTAPLGRITAFHG
                     QMGMYVRALAYMLSHGGDGMRQASEDAVLNANYVRASLADLMSLPFGNKPCMHEVLFD
                     DDWLKDSGVTTLDFAKAMIDEGYHPMTMYFPLVVHGAMLIEPTESESKASLDLFIATL
                     RDLAFAVRCGDVARFTGAPHHAPRRRLDETRAARQPVLKWAPPAPLSEAAE"
BASE COUNT          268 a          573 c          620 g          286 t
ORIGIN      
        1 cggggtttta ttccgctgcc tcgctcagcg gcgccggcgg cgcccatttg agcaccggct
       61 gacgggcggc gcgggtctcg tcgaggcggc ggcgcggagc gtgatgcggc gcgccggtga
      121 agcgcgcgac gtcgccgcac cgcacggcga aggcgagatc gcgcagcgtc gcgatgaaca
      181 gatccagcga tgccttggat tccgattcgg tcggctcgat cagcatggcg ccgtgcacga
      241 cgagcgggaa atacatggtc atcgggtgat aaccttcgtc gatcatcgcc ttagcgaaat
      301 cgagggtggt cacgccgctg tccttgagcc agtcgtcgtc gaacagcacc tcgtgcatgc
      361 acggcttgtt gccgaagggc agcgacatca gatcggcgag gctggcgcgc acgtaattgg
      421 cgttgaggac cgcatcctcc gaggcctggc gcatgccgtc gccgccgtgc gagagcatgt
      481 aagcgagcgc ccgcacatac atgcccatct ggccgtggaa cgcggtgatg cggcccaacg
      541 gcgccgtgcc ctcggcatcg cgctcatgct cgatgagcgc gaacggaggc tccctcccct
      601 cttccggccc tccaatttgg cgtttggcgt ccgagcgccg aaacaagttt ttccacgaca
      661 gggccctgcg ccagccgttc ggctcccgac cctctccctc gccgggggag gcagaagcca
      721 ggacgaaggg cagcggcgcg taaggagcga gacgctccga cagcacgacc gggccggccc
      781 cgggaccgcc gccgccgtgc ggagtcgaga aggtcttgtg caggttgatg tgcatggcgt
      841 cgacgccgag atcaccgggc cgcaccttac cgacgatggc gttgaagttg gcgccgtcgc
      901 agtagaaata ggcccccgcc gcatgcagcg cgtcggcgat ctcgatgatc tgaggctcga
      961 acaggccgca ggtgttcgga ttggtgagca tgatcgctgc gacgtgcggg ccgagcagcg
     1021 gcttgacgtc gtcgacatgc acccagccgt cgtcgcgcgc cgggaccgcc ttgaccctga
     1081 atccgagaag ggcggccgtc gccggattgg tgccatgcgc cgattccggc acgagcacga
     1141 tcttgcgtgt cgcgccctcc cccttggcat cgatcgccgc cttgatggcc atcatcccga
     1201 gcagttcgcc gtgggcaccg gccttgggcg ataaggccac ggccggcatc ccggtcagcg
     1261 tggtgaggta gcgggcaagc tcgtgcatca gctcgagggc gccctgcacg gtcgagaccg
     1321 gctgcagcgg gtgcacgtcg gcgaagcctg gcaggcgcgc gacgcgttcg ttgagacggg
     1381 cgttgtgctt catggtgcac gagccgagcg ggaacaggcc ggtgtcgatg ccgtaattca
     1441 tctgcgaaag gcgcacatag tggcgcatgg cctcgggctc ggacaggccg ggaagcccga
     1501 tggagccggt gcgctccagc ccgccgagac gcggctcgaa agcgtccggc tcgtcgaggt
     1561 cgacgcccgt gcactccatg cggccgatct cgaagatcag gggctcgatt tgcgcgagcg
     1621 ccttgttgcc ggtgaaggtt gccggcgccg cggcggcggt tgcttgcgcg gcatggtcgc
     1681 cttgcaggcg ccccgcctct ccactcgtcc cggcggcggg atgggctccg gctgcctcct
     1741 gtgcctg
//
LOCUS       DATAIQ010000574         2187 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_398914, whole genome shotgun sequence.
ACCESSION   DATAIQ010000574 DATAIQ010000000
VERSION     DATAIQ010000574.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2187)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2187)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2187
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_398914"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..277
                     /locus_tag="VHN20_09510"
     CDS             <1..277
                     /locus_tag="VHN20_09510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018261717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="FkbM family methyltransferase"
                     /protein_id="HEX2726042.1"
                     /translation="KIDVEGFEDRVLHGLSRPVAGLSFEFTTIARVVAQSCLERLSTL
                     GSYRFNVALGESQQLALGRWVNLDEMSAYLGELPHEANSGDVYAVLD"
     gene            282..1226
                     /locus_tag="VHN20_09515"
     CDS             282..1226
                     /locus_tag="VHN20_09515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013948209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726043.1"
                     /translation="MRLPLAALLVVLAMPGRAASLDGVAVEVTNASEPVLCAEKDNVT
                     VNLTSPQVRSFRVQALHPAYIGALTQDRHAPDFTACQELSRETTEIRPPRQVTFYEDV
                     ETWLTGTTFTNFWRPHDVPFRVGERVERGLHLVQLWVRRDERAEEVLVIYPGDGYWRI
                     RPLPPAHMRWSAYGSSFLVGPVESEGRPVVKIKDIAFDPKTMTFRLGFARGGSATLKV
                     DKLDRDQLALDVTFDQPVSGHPFAALRSMYVTESNADVARLALREPDAKGWREEPVMS
                     FGRARATDVWAGRLVPSRHNTSAPDMVFNRFQAAPATR"
     gene            complement(1251..>2187)
                     /locus_tag="VHN20_09520"
     CDS             complement(1251..>2187)
                     /locus_tag="VHN20_09520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009211404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HEX2726044.1"
                     /translation="WGMLIALSMLWGGSFLFVGLAVRELPPLTIVLFRVALAALALHA
                     VIRSAGIPMPRDRRVWAAFLWMGLLNNAVPFTLITWAQGHVASGVASIFNATTPLFTA
                     LVAHWWTRDEKLSAGRVAGVAIGFAGVAIMMAAPDPWSFGADVMAEAALLTAAIFYAV
                     SGVFGRRFKAMGVEPLATAAGVLTASSLLLLPVTLIIDRPWALPGPGATTVFAIFGLA
                     LLATALAYIIYFRILAVAGATNLLLVTFLIPVSAIALGAAVLGERLEPRHFYGMAMIG
                     LGLGAIDGRPLGALRRMIRQRVHRFTENGRALKED"
BASE COUNT          373 a          740 c          748 g          326 t
ORIGIN      
        1 caagatcgac gtcgaaggtt tcgaggaccg cgtgctccac ggactgagcc ggcccgttgc
       61 ggggctgtca ttcgagttca cgacgatcgc gcgcgtcgtg gcgcaaagct gcctcgagcg
      121 cctgtcgacg ctgggcagct accgtttcaa cgtcgcgctc ggggagagcc agcaactcgc
      181 gctgggccga tgggttaacc ttgacgagat gtccgcctac ctgggggagt tgccgcacga
      241 ggcaaattcc ggcgatgtct atgccgtgct ggactgaccc gatgcgcctt cccctcgccg
      301 ccctccttgt cgtgcttgca atgcccggcc gcgccgccag tctcgacggc gtcgccgtcg
      361 aggtgaccaa tgcgagcgag ccggtgctgt gcgccgagaa ggacaacgtc accgtcaacc
      421 tgacgtcgcc ccaggtgcgg agcttccgcg tccaggccct gcatccggcc tatatcggcg
      481 cgctgacgca ggaccgacat gcgccggatt tcacggcctg ccaggaactc tcgcgcgaga
      541 ccaccgaaat ccgcccgccg cgccaggtca ccttctacga ggatgtggag acgtggctca
      601 cgggcacgac cttcaccaat ttctggcgcc cgcacgacgt gccgttccgc gtcggcgagc
      661 gagtcgagcg cggcctgcac ctggtgcagc tctgggtgcg gcgcgacgag cgggccgagg
      721 aggtgctggt catctatccg ggcgacggct actggcgcat ccggccgctg ccgcccgcgc
      781 atatgcgctg gagcgcctac ggctcgtcgt tcctcgtcgg cccggtcgag agcgaaggac
      841 ggcctgtggt caagatcaag gacatcgcct tcgatccaaa gacgatgacg ttccggctgg
      901 gcttcgcccg cggcggcagc gccaccctta aggtcgacaa gctcgatcgc gaccagctcg
      961 ccctcgacgt caccttcgac cagccggtca gcggccatcc gttcgcggcc ctgcgctcga
     1021 tgtacgtcac ggaatcgaac gccgacgtcg cccgccttgc cttgcgcgag ccggacgcaa
     1081 aaggctggcg cgaggagccg gtcatgtcgt tcggccgcgc cagggcgacg gatgtctggg
     1141 ccgggcgcct cgtcccatcg cgccacaaca cgagcgcgcc cgacatggtc ttcaatcgtt
     1201 tccaggcagc gcccgcgacc cgttgaccgc gccggtcgag cgatcggttt ttagtcttct
     1261 ttcagcgcac gaccgttttc ggtgaagcgg tgtactcttt gccggatcat gcgccgtagc
     1321 gcgccgagcg gccgtccgtc gatggcgccg aggccgaggc cgatcatcgc catgccgtag
     1381 aaatgccggg gctcgagcct ttcgccgaga acggccgcgc cgagggcgat ggcgctcacc
     1441 gggatcagga aggtgacgag cagcaggttg gtggcaccgg cgaccgcgag gatgcggaaa
     1501 tagatgatgt acgcgagcgc cgtcgcgagc agcgccaatc cgaagatggc gaatacggtt
     1561 gttgcgccgg gacccgggag ggcccacggc cggtcgatga tcaacgtcac gggaaggagc
     1621 agcaggctcg aagccgtcag cacgccggcc gcggtggcga ggggttcgac gcccatcgcc
     1681 ttgaagcgcc ggccgaagac cccgctcacc gcgtagaaga tcgccgccgt gagcagcgcg
     1741 gcctcggcca tgacgtcggc gccgaaggac cacggatccg gcgcggccat catgatggcg
     1801 acgccggcga agccgatggc cacgccggcg acgcggccgg cgctcagctt ttcatccctc
     1861 gtccaccaat gcgcgaccaa ggccgtgaac agcggcgtcg tggcattgaa gatcgacgcc
     1921 acgccgctgg cgacatggcc ttgcgcccag gtgatcagcg tgaacggaac ggcgttgttg
     1981 agcagtccca tccacaggaa ggctgcccag acgcggcggt cgcgcggcat gggaatgccg
     2041 gcggagcgga tcacggcgtg aagcgccagc gcggcgagcg cgacgcggaa caggacgatg
     2101 gtcagcggcg gcaactcgcg cacggcaagg ccgacgaaca ggaacgagcc gccccacagc
     2161 atcgagagcg cgatgagcat gccccat
//
LOCUS       DATAIQ010000575         2325 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_306715, whole genome shotgun sequence.
ACCESSION   DATAIQ010000575 DATAIQ010000000
VERSION     DATAIQ010000575.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2325)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2325)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2325
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_306715"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..350)
                     /locus_tag="VHN20_09525"
     CDS             complement(<1..350)
                     /locus_tag="VHN20_09525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004446529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HEX2726045.1"
                     /translation="MSALSNRRFLKMNGLGNEIVVVDLRGGAGPVSPEEARAIAGDPR
                     SRFDQLMTIHDPRSPGTDAYLRIYNTDGSQSGACGNGTRCVAWAMIEDAVMGRPAGKG
                     LLLETQAGLLPVARV"
     gene            490..1230
                     /locus_tag="VHN20_09530"
     CDS             490..1230
                     /locus_tag="VHN20_09530"
                     /inference="COORDINATES: protein motif:HMM:NF018184.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GyrI-like domain-containing protein"
                     /protein_id="HEX2726046.1"
                     /translation="MKRGLMILGIVAVGLAFGVNETPAQGTGTSRPGAVESSPLAPPA
                     APPAPGQPPAGRGDTLTQDPGPPAPPGPQVPAPFAGGRPTLVPKAGDPLDVDEVVLPS
                     KPTAMMAGVSTWTEGFADLKKTLERIEDELRKAGIAPAGRPLTVFTETDDSGFHYEAM
                     VPVEQVPQGRTSLTAEIRFSRTPEGKAYRFVHKGPYEEIDETYDTISTYLDAKGIIAK
                     DAFLEEYVTDLVDPQDDNTEVNIFVQPR"
     gene            complement(1227..2297)
                     /locus_tag="VHN20_09535"
     CDS             complement(1227..2297)
                     /locus_tag="VHN20_09535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015929428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX2726047.1"
                     /translation="MDRRKLLKFLGIPALSALGGAAYAQARANSNPYYQGPVTDHFDG
                     VRFSNPPGGPAMKPFTDFLKWQVSGGREPWPEQYPSPFADKPPQRSTELRIVLIGHAS
                     VLIQVAGVNILVDPIWSERASPFTFTGPKRVNPPGIAFDDLPPIDVVLITHNHYDHLD
                     RASVSRLWHVHRPRVVAPLGNDSIIRDFDASIVVEAHDWGDTIALSDSVAAHLAPAYH
                     WSARKLTDRRMALWCAYVLTTPAGVVYHVGDTGYGDGAIFRTVRERYGAPRVAVLPVG
                     AYEPRWFMQPQHMNPGEAVRVFLDCGAEQALGHHWGTFRLTNEGVERPLRDLSAALAA
                     HGLAAQRFRALRPGEAWGGAVG"
BASE COUNT          387 a          787 c          817 g          334 t
ORIGIN      
        1 acccgggcga cggggagcaa ccccgcctgc gtctcgagca gcagcccctt gccggccggc
       61 cgccccatca ccgcgtcctc gatcatggcc caggcgacgc agcgggtgcc gttgccacag
      121 gcgccggatt gcgagccgtc ggtgttgtag atgcgcagat aggcgtcggt gccaggcgag
      181 cgcggatcgt ggatggtcat gagctggtcg aagcgcgagc gcgggtctcc ggcgatggcg
      241 cgcgcttcct cgggcgacac gggcccggcg ccgccgcgca ggtcgaccac cacgatctcg
      301 ttgccgagac cgttcatctt gaggaagcgg cggttggaaa gggcgctcat gggcgggtgc
      361 gaagcaaatc tcggggggta tatggggcaa aagcgctgaa taggcgagtc gggcgcccgc
      421 gacgccctcc cccgacgccc atgaacggcc tatgctgatg tccgaccttc cacagtcgcg
      481 ggcggcttta tgaaacgtgg cctcatgatc ctgggcattg tcgccgtcgg cctggcgttc
      541 ggcgtgaacg agacgccggc gcaggggacg ggcacgtcgc gcccgggagc cgtcgaatcg
      601 agcccgctcg caccgccggc agcgccgccc gcgcccgggc agcccccggc cggacgtggc
      661 gatactctga cgcaggaccc agggccgcct gcccctccgg gcccgcaggt gccggcgcct
      721 ttcgccggcg gacggccgac gctggtgccg aaggccggag atcctctcga tgtcgacgaa
      781 gtcgtcctgc cgtcgaaacc gaccgcgatg atggcgggcg tcagcacctg gaccgagggg
      841 tttgccgacc tcaagaagac cttggagaga atcgaggacg agctcaggaa ggccgggatc
      901 gcaccggcag gacgtccgct caccgtgttc accgagacgg acgattcggg cttccactac
      961 gaggccatgg tgccggtcga gcaggtcccg caaggccgca ccagcctcac ggccgagatc
     1021 cgtttcagcc gcacgcccga aggcaaggct tatcgcttcg tccacaaagg cccctacgag
     1081 gagatcgacg agacctacga cacgatctcg acctatctcg acgccaaggg catcatcgcc
     1141 aaggacgcct tcctcgagga atacgtcacc gatctcgtcg atccccagga cgacaacacc
     1201 gaggtcaata tcttcgtgca gccgcgctag ccgacggcac ctccccacgc ctcccccggc
     1261 ctgagcgcgc ggaagcgctg cgccgcaagc ccgtgcgcgg cgagcgcggc ggacagatcg
     1321 cgcagcggcc gctcgacgcc ttcgttggtg aggcgaaacg tgccccagtg gtggccgagg
     1381 gcctgctctg cgccgcagtc gaggaacacg cgcacggcct cgccgggatt catgtgctgc
     1441 ggctgcatga accagcgcgg ctcgtaggcg ccgaccggca gcaccgccac gcgcggcgcg
     1501 ccgtagcgct cgcgcacggt ccggaagatg gcgccgtcgc cgtagccggt gtctccgacg
     1561 tggtagacga cgccggcggg cgtcgtcagc acataggcgc accacagcgc catgcggcgg
     1621 tcggtgagct tgcgcgccga ccagtgatac gccggcgcga gatgggccgc gaccgagtcc
     1681 gacagggcga tggtgtcgcc ccagtcgtgc gcctcgacga cgatgctcgc gtcgaaatcg
     1741 cggatgatgc tgtcgttgcc gagcggcgcc acgacgcggg gccggtgcac gtgccagaga
     1801 cggctcacgc tcgcacggtc gagatgatcg taatgattgt gcgtgatcag cacgacgtcg
     1861 atcggcggca ggtcgtcgaa cgcgatgccc ggcggattca cgcgcttcgg cccggtaaag
     1921 gtgaacgggc tggcgcgctc cgaccagatc ggatcgacca gaatgttgac gcccgccacc
     1981 tggatcagga cgctcgcgtg accgatgagc acgatgcgca gctcggtgct ccgctgcggc
     2041 ggcttgtcgg caaacgggct cggatactgc tcgggccagg gctcgcgccc gccgctgacc
     2101 tgccatttga gaaagtccgt gaacggcttc atcgccggcc cgcctggcgg gttggagaag
     2161 cgcacgccgt cgaaatggtc cgtgaccggg ccctgataat acggattgct gttggcgcgg
     2221 gcctgggcgt aggcggcgcc cccgagcgcg ctcagggcgg ggatgccgag gaacttgaga
     2281 agcttgcgtc ggtccatggc gtcaacattg cgagcgcatg acacc
//
LOCUS       DATAIQ010000576         3603 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_59535, whole genome shotgun sequence.
ACCESSION   DATAIQ010000576 DATAIQ010000000
VERSION     DATAIQ010000576.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3603)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3603)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3603
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_59535"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1539)
                     /locus_tag="VHN20_09540"
     CDS             complement(<1..1539)
                     /locus_tag="VHN20_09540"
                     /inference="COORDINATES: protein motif:HMM:NF014795.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HEX2726048.1"
                     /translation="MNKIEPMPLPGTNQEYRGWQSDVIVDLIKQYGFEYITLNPGASF
                     RGLHDSLINYGGNTPPMLLCQHEKIAVQIAHGYGKAKGKPMAVILHNLVGLLHAPMGI
                     YYAYIDRVPIFIMGATGPMDEGKRRPHIDWTHTALVQGEAVRHIVKWDYQPTAIEGVP
                     ESFARAYSVMTTEPQGPIYMCYDAALQEAPLKADVPLPPVGSVATPAPMMPDPTALKA
                     IADRLLKAENPMLLAEFVGRRQGGFESLVQLAETVGAGVWDINNSLNFPNKHPLCVSL
                     DKGALKNVDLVVGLDVKDWEKPTHELNSTTRVVEPLVSKNCDWVEVGFGEIGMSKWSM
                     DYGRMQPCSVRAIGDTALGIPELTRLCRSAIDKDATLKTRIAERRKAIGTRHDQTWAK
                     WQDEARENWDAAPMTVPRLALEVWDVIKDHDWVLAANTLKNWVRRLWDFDKPYRHPGQ
                     DLGTGTQIGISLGVALANKGSGRLVVDIQPDGDLMFDAGALWFASKHEIPMLIVMYNN
                     RAYYN"
     gene            complement(1660..2676)
                     /locus_tag="VHN20_09545"
     CDS             complement(1660..2676)
                     /locus_tag="VHN20_09545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726049.1"
                     /translation="MGFRSWVLAAAVAVTGAGCTAQAQSPAEFYKGKTVEIYIGYSVG
                     GAYDVYARLLARHMGKHIPGKPTVVNKNMEGAGSLRLANWLYNVAPKDGTAFGIIGRG
                     IPFDPLLGGGGQFDATKFSWIGSANDEVSICAAWHATPVNTFEDLLTREMIVGGTASG
                     ADTDQFPKIVNGVLGAKMRVISGYPGGNEITLAMERGEVQGRCGWSWSSVKATHPTWV
                     NDKKIKILMQLSLAKHPDLPDVPLITDLAKTDEQRQILKLVFARQVMGRPFLGPPGIP
                     DDRLAALRKAFMDTMKDPEFLTEAEKGKLEITPVAGEEIQKLVAEVYATPKDIAAKAG
                     AMLK"
     gene            2898..3167
                     /locus_tag="VHN20_09550"
     CDS             2898..3167
                     /locus_tag="VHN20_09550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726050.1"
                     /translation="MNAGRHANGQDLEGRLDALSAMVKGLLTTLVMRGVLTKADIPTL
                     VKECEAVLGGNPAAGAELRSIQNDMPSFLRAALGPAPDPDEDHDD"
     gene            3182..>3603
                     /locus_tag="VHN20_09555"
     CDS             3182..>3603
                     /locus_tag="VHN20_09555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726051.1"
                     /translation="MKAVLYTFQRSDPVHRFRDDFPQLQWAVASSPQDIAREIGDADI
                     LVLTNRVCTPELGAALRAGAPASLGWIHFLTSGVERGLAMGLPPGAAISNASGLKART
                     VAEHALALLLGVMRRLPDVQAAQRAHAWRREELQPTLSS"
BASE COUNT          536 a         1195 c         1190 g          682 t
ORIGIN      
        1 gttgtagtag gcgcggttgt tgtacatcac gatcagcatc gggatttcgt gcttggacgc
       61 gaaccacagc gcgccggcgt cgaacatgag atcgccgtcc ggctggatgt cgaccacgag
      121 ccgtccgctg cccttgttgg cgagcgccac gccgagcgag atgccgatct gcgttccggt
      181 gccgagatcc tggcccggat ggcgatacgg cttgtcgaag tcccagagcc ggcgcaccca
      241 gttcttgagc gtgttggccg caaggaccca gtcgtggtcc ttgatcacgt cccagacttc
      301 cagggcgagc cgcggcactg tcatcggcgc agcatcccag ttctcgcgcg cctcgtcctg
      361 ccacttggcc caggtctggt cgtggcgcgt gccgatcgcc ttgcgccgtt cggcgatgcg
      421 ggtcttgagc gtggcgtcct tgtcgatcgc gctccggcac aggcgcgtga gctccgggat
      481 gccaagcgcc gtgtcgccga tcgcccgcac cgagcacggc tgcatgcggc cgtaatccat
      541 cgaccacttg ctcatgccga tctcgccgaa gcccacctcg acccagtcgc agttcttgga
      601 cacgagcggc tcgacgacgc gcgtcgtgct gttgagctcg tgcgtcggct tctcccaatc
      661 cttgacgtcg agcccgacga cgagatcgac gttcttgagg gctcccttgt cgaggctcac
      721 gcacaggggg tgcttgttgg ggaagttgag ggagttgttg atgtcccaca cgccggcccc
      781 gaccgtctcg gcgagctgca cgaggctctc gaaaccgccc tgccgccgcc cgacgaattc
      841 ggcgaggagc atcgggttct cggccttgag gaggcggtcg gcaatggcct tgagcgccgt
      901 ggggtccggc atcatcggcg ccggcgtcgc gaccgatccg accggcggca gcggcacgtc
      961 cgccttcagc ggggcttcct gcagggccgc gtcgtagcac atgtagatcg ggccctgcgg
     1021 ctcggtggtc atcaccgaat aggcgcgggc gaacgattcc ggcacgccct cgatggcggt
     1081 cggctggtaa tcccacttga cgatgtggcg caccgcctcg ccctggacga gcgccgtgtg
     1141 cgtccagtcg atatgcgggc gccgcttgcc ttcgtccatc ggcccggtcg cgcccatgat
     1201 gaagatcggc acgcggtcga tataggcata gtagatgccc atcggcgcgt gcagcagccc
     1261 gacgaggttg tgcaggatca cggccatcgg cttgcctttg gccttgccgt agccatgcgc
     1321 gatctgcacc gcgatcttct cgtgctggca cagcagcatc ggcggcgtgt taccgccgta
     1381 gttgatcagc gagtcatgca gcccgcgaaa gctcgcgccc gggttgagcg tgatgtactc
     1441 gaacccgtat tgcttgatga ggtcgacgat cacgtccgac tgccatccgc gatactcctg
     1501 gttcgttccg ggcaacggca ttggttcgat cttgttcaac ggctttgtcc tctgcggcgg
     1561 gttgatgatg attcaggacg gatcggcgcg cttgcgcgtc ggatgtcaag acaaatgcgg
     1621 caagcgcgcg ttgccagcgg ccaccttgcg tgcgcccggt tacttgagca tggccccggc
     1681 tttcgcggcg atgtccttgg gcgtcgcata gacctcggcg acgagcttct ggatctcctc
     1741 gccggccacc ggggtgatct cgagcttgcc cttttccgcc tcggtcagga attccgggtc
     1801 cttcatcgtg tccatgaagg ccttgcgcag cgccgccagg cgatcgtccg ggatgccggg
     1861 cgggccgagg aaaggacgcc ccatcacctg gcgcgcgaac accagcttga ggatctgcct
     1921 ctgctcgtcg gtcttggcga ggtcggttat gagcggcacg tccggaaggt ccggatgctt
     1981 ggcgagcgag agctgcatca ggatcttgat cttcttgtcg ttgacccacg tcggatgcgt
     2041 ggccttcacg ctcgaccacg accagccgca gcggccctgc acctcgccgc gttccatggc
     2101 gagcgtgatc tcgttgccgc ccggatagcc ggagatgacg cgcatcttgg cgccgagcac
     2161 gccgttgacg atcttcggga actggtcggt atcggcgccg ctcgcggtgc cgccgacgat
     2221 catctcccgg gtgagcaggt cctcgaacgt gttgaccgga gtggcgtgcc aggccgcgca
     2281 gatgctgacc tcgtcgttcg cgctgccgat ccagctgaac ttggtggcgt cgaactggcc
     2341 gccgccgccg agcagcggat cgaacgggat gccgcggccg atgataccga acgccgtgcc
     2401 gtctttcggc gcgacgttgt aaagccagtt ggcgaggcgg aggctgccgg cgccttccat
     2461 gtttttgttc acgaccgtgg gcttgccggg gatatgcttg cccatgtgac gggccagaag
     2521 cctggcatac acgtcgtagg caccgcccac gctatagccg atataaatct cgaccgtctt
     2581 gcccttgtag aactcggcag ggctctgcgc ttgcgcggtg cagcccgcgc ctgtgaccgc
     2641 gacggccgcg gcgagcaccc agctccgaaa tcccatcggt cccctccctc gtcgttttcg
     2701 ttctggcctg cctcccggga catgccttgg ccgggcatat aaacgggccg cgaccgcccg
     2761 acaatcgcgc ttgcaaccct tccggcgctt ggttcgctgc gatccccgcg ctagagcttg
     2821 ggaccgacgc cttccctcat gcgttgcagg gagggagcgc cgcgtgtgcg caagaaaatt
     2881 gatcactgga gaaagccatg aatgcaggtc gacatgccaa cggacaggat ctcgaagggc
     2941 ggctcgatgc cctcagcgcc atggtcaagg gccttctgac gacgctcgtg atgcggggcg
     3001 ttttgacgaa agccgacatt ccgaccctgg tgaaggaatg cgaggccgtg ctcggcggca
     3061 atccggccgc cggcgccgag ctgcgctcga ttcagaacga catgccgagc tttctgcgcg
     3121 ccgccctcgg cccggccccc gatccggatg aggatcacga cgactgacct cccgggcgcc
     3181 catgaaggcg gtgctctaca ccttccagcg gagcgatccg gtccaccgct tccgggacga
     3241 tttcccgcag ctgcaatggg cggtcgcatc ctcgccgcag gacatcgcgc gcgaaatcgg
     3301 cgacgcggac attctcgtgc tgaccaaccg ggtctgcacc cccgagctcg gggccgcctt
     3361 gcgcgcgggc gctccggctt cgctcgggtg gattcacttt ctcacatcgg gggtggagcg
     3421 cggccttgcc atggggctgc cgcccggggc ggcgatcagc aacgcgtccg gtctcaaggc
     3481 gcgcaccgtc gccgagcatg cgctggcgct gcttctcggc gtgatgcgcc ggctcccgga
     3541 tgtccaggcg gcgcagcggg cccatgcctg gcgccgcgag gagttgcagc cgacgctgtc
     3601 gtc
//
LOCUS       DATAIQ010000577         5064 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_398997, whole genome shotgun sequence.
ACCESSION   DATAIQ010000577 DATAIQ010000000
VERSION     DATAIQ010000577.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 5064)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5064)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5064
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_398997"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..371)
                     /locus_tag="VHN20_09560"
     CDS             complement(<1..371)
                     /locus_tag="VHN20_09560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013168845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydro-3-deoxy-6-phosphogalactonate aldolase"
                     /protein_id="HEX2726052.1"
                     /translation="MDFRRYVSELPLIAILRGLAPENAVEIGRALADAGFRVIEVPLN
                     SPQPFVSIERLAKALPDCLVGAGTVLDPADVDRVSVGGGRLIVMPHSDPEVIERARQL
                     GLACTPGVATPTEAFAALKAGA"
     gene            complement(503..1270)
                     /locus_tag="VHN20_09565"
     CDS             complement(503..1270)
                     /locus_tag="VHN20_09565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009340225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEX2726053.1"
                     /translation="MAVTLERLEGGVALLRIDRPEARNALNGAVREELARHFDDLATD
                     DEIRCVIITGSPTVFAAGADLKAMAAAGAVEMMLRGTHLTWAPVKDFPKPLVAAVNGW
                     ALGGGCELAMHADLIIAGEGARFGQPEIKVGIIPGAGGTQRLVRAVGKFKAMRMLLTG
                     EPISAREADAMGLVTEVVPDAEVLDRAIALARAIAALPPIAARKIKEVVAQGADLPLE
                     AALTLERQAFQLMFDTEDQKEGMAAFLEKRPPRFRGR"
     gene            1378..2370
                     /gene="tal"
                     /locus_tag="VHN20_09570"
     CDS             1378..2370
                     /gene="tal"
                     /locus_tag="VHN20_09570"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020186922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004801 - transaldolase activity [Evidence
                     IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HEX2726054.1"
                     /translation="MNVALKSKEAVAAPASKLDQLRSMTVVVADTGDIEAVRRLRPQD
                     CTTNPTLLLKAAETPAYASLVDEALAWGRQQGGAREAVVAAVCDRLAVSFGSELAKIV
                     PGRVSTEVDADLSFDTEASIARARAIIAAYQERGVPRERILIKIASTWEGIRAAEVLQ
                     RDGIDCNLTLLFSLVQAAACADAGVYLISPFVGRILDWHVKAGGGPYTPDTDPGVQSV
                     RRIYAYYKAHDIATVVMGASFRNAGEIEALAGCDRLTISPALLDELGAAHAPLPRRLD
                     PAPAADAPARLALDEKTFRFRLNEDAMASEKLAEGIRQFVKDLRALRSLMATRL"
     gene            2490..3797
                     /gene="hisD"
                     /locus_tag="VHN20_09575"
     CDS             2490..3797
                     /gene="hisD"
                     /locus_tag="VHN20_09575"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006021828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004399 - histidinol dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HEX2726055.1"
                     /translation="MARWLKRGRDADAIAEEDAKIRATVEGILADIAARGDAAVRELS
                     VKFDRWDRADYRLTDAEIRDRVGQLSNRAISDIKFAQEQVRNFAEHQRAALQDIEVET
                     LPGVVLGHKNIPVNSVGCYVPGGKYPLLASAHMSVITAKVAGVDRIITCAPPYQGKPA
                     PAIVAAQHLAGADVIYCLGGIQAVGAMALGTQSIVPVDMLVGPGNAYVAEAKRQLYGR
                     VGIDLFAGPTETLVIADETVDGELCATDLLGQAEHGPNSPAILLTTSEKLARDTMAEV
                     ERLLGMLPTAEIARKAWEDCGEVIVCESEEEMVREADRIASEHVQVMTRDPDYFLDNM
                     TNYGALFLGPRTNVSYGDKVIGTNHTLPTKKSARYTGGLWVGKFLKTVTYQKVLTDEA
                     SARIGEYCSRLCMLEGFAGHAEQANIRVRRYGGRNIPYATAAE"
     gene            3806..4570
                     /locus_tag="VHN20_09580"
     CDS             3806..4570
                     /locus_tag="VHN20_09580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011969919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX2726056.1"
                     /translation="MSLPTTPSFSLEGKRALVTGAGRGIGLAAASAFAAAGAHVTLMA
                     RSRDEIETAAEQIRAGGGSADALHGDVTEIDAFEQAVQRAAPYDVFFNNAGMNRPQPF
                     IEVSVENFDTIMGLNVRAAFFAAQAVARRLVAAQKAGSIINMSSQMGHVGAAGRSVYC
                     TSKWAIEGLTKAMAVELAEHRIRVNTICPTFIETPMTRPFLADPAFKDRVLSKIKLGR
                     LGTVEDLMGALVFLASDASALMTGSALVVDGGWTAE"
     gene            complement(4604..>5064)
                     /locus_tag="VHN20_09585"
     CDS             complement(4604..>5064)
                     /locus_tag="VHN20_09585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011970025.1"
                     /note="catalyzes the formation of malonyl-CoA from
                     malonate and CoA; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="malonyl-CoA synthase"
                     /protein_id="HEX2726057.1"
                     /translation="KGYWRMPEKTDAEFRKDGFFITGDLGKIDERGYVHIVGRGKDLI
                     ITGGYNVYPKEVESEIDAIPGVVESAVIGVQHPDFGEGVTAVVVPEKSARLDEQQVVA
                     AIEGRLAKFKLPKRVIFVDDLPRNTMGKVQKNILRDTYAQLYADKTSTRA"
BASE COUNT          820 a         1749 c         1704 g          791 t
ORIGIN      
        1 gcgcccgcct tgagggcagc gaaggcctcc gtcggcgtgg cgacgccggg cgtgcaggca
       61 aggccaagct ggcgggcccg ctcgatcacc tcgggatcgg agtgcggcat gacgatgagt
      121 cggccgccgc ccaccgacac gcgatcgacg tccgcgggat cgagaacggt tcccgccccg
      181 acgagacaat cgggcagggc ctttgccagc cgctcgatgc tgacgaaagg ctgcggcgag
      241 ttgagcggca cttcgatgac gcgaaagccc gcgtcggcca gcgcgcggcc gatctcgacc
      301 gcattctccg gcgcaaggcc gcgcaggatg gcgatcagcg gaagctcgga gacgtaacga
      361 cgaaaatcca tgctgtgtcc tgcctcttcg cggccggtcg caagtgacgg atttggccag
      421 cacaccaagc cgcggacgtc aagcgccgcc gttcgcggcg aaacggtcgc gtcgcaagca
      481 agagcggatc gatgcgtccc ggtcagcggc cgcgaaagcg cggcggccgc ttctcgagga
      541 atgccgccat gccctctttc tgatcttcgg tgtcgaacat caattgaaag gcctgccgct
      601 ccagcgtcag ggcagcctcg agcggcaggt cggcgccctg cgccacgacc tccttgatct
      661 tgcgcgcggc gatcggcggc agggcggcga tcgccctggc gagcgcgatc gcccggtcga
      721 gaacctcggc atccggcacg acctcggtga cgaggcccat ggcgtcggct tcccgcgcgc
      781 tgatcggctc gcccgtcaga agcatcctca tggccttgaa cttgcccacg gcgcgtacga
      841 ggcgctgcgt gccgccggcg cccgggatga tgccgacctt gatctccggc tgcccgaacc
      901 tggcgccctc gccggcgatg atcagatccg catgcatggc gagttcgcag ccgccgccga
      961 gcgcccagcc gttcacggcc gcgaccagcg gcttcggaaa atccttgacc ggcgcccagg
     1021 tcaggtgcgt gccgcgcagc atcatctcga cggcgcccgc cgcggccatc gccttgaggt
     1081 cggccccggc cgcgaacacc gtcggcgatc cggtgatgat gacgcagcgg atctcgtcat
     1141 cggtggcgag gtcgtcaaaa tgccgcgcca gttcctcgcg caccgctccg ttcagggcgt
     1201 tgcgcgcctc gggacggtcg atacgcagca gcgcgacccc cccttccaac cgctccaacg
     1261 tgacggccat gaccaaacct tccccagtgc taacggcgat cctgtgctcc cgagcttgca
     1321 ccgggaaggg gattgccgct acctgatgcc ggacgggtcc cagcaaagtg gatgcggatg
     1381 aacgtggcgc tcaagagcaa ggaggcggtc gcggccccag cctccaagct cgatcaattg
     1441 cggtcgatga ccgtggtcgt ggccgatacc ggggacatcg aggcggtgcg gcggctgcgg
     1501 ccgcaggact gcacgaccaa cccgaccttg ctcctcaagg ccgccgagac gccggcctat
     1561 gcgtcgctcg tcgacgaggc cctggcgtgg ggccggcaac agggcggcgc gcgcgaggcg
     1621 gtcgtcgccg ccgtgtgcga ccggctggcg gtctcgttcg gcagcgagct ggcgaagatc
     1681 gtgccgggcc gcgtctcgac cgaggtcgac gccgatcttt ccttcgatac cgaagccagc
     1741 atcgcccgcg cccgcgccat catcgcggcc tatcaggaac gcggcgtgcc gcgcgagcgc
     1801 atcctgatca agatcgcatc gacctgggaa gggatccgcg ctgccgaggt tctgcagcgc
     1861 gacggcatcg actgcaacct gaccctgctg ttctcgctgg tccaggcggc ggcctgcgcc
     1921 gatgccggcg tctatttgat ctcgcccttc gtcggccgca tcctcgactg gcacgtgaag
     1981 gccggcggcg gcccgtacac accggacacc gatccaggcg tgcaatcggt gcgccgcatc
     2041 tatgcctatt acaaggcgca tgacatcgcg acggtcgtga tgggcgcctc gttccgaaac
     2101 gccggcgaga tcgaggcgct ggccggctgc gaccggctga ccatttcgcc ggcgcttctc
     2161 gacgaactcg gcgcggcgca tgcgcccttg ccgcgccggc tcgatcccgc cccggccgcc
     2221 gacgcgccgg cgcgccttgc gctcgacgag aagacgttcc gcttccggct caacgaggac
     2281 gccatggcga gcgaaaagct cgccgagggc atccgccagt tcgtcaagga tctgcgagcg
     2341 ctgcgctcgc tcatggccac gcggctgtag ctcgcatgcc ggcgtggccg gccaagcggg
     2401 gcgctttgcc gaacgggacc atgcgataaa agacggggcg ggatcgctgc aatctgcatc
     2461 gatccggctc cgaaaacagg ggagtgacca tggcgcgctg gctcaaacgt ggacgcgacg
     2521 cggacgccat tgcggaagag gatgccaaga tccgcgccac cgtcgagggc atcctggccg
     2581 atatcgcggc gcgcggcgat gccgcggtgc gcgagctgtc ggtcaagttc gatcgctggg
     2641 accgtgccga ttaccgtctc acggatgccg agatcaggga ccgcgtcggg cagctctcga
     2701 accgcgccat cagcgatatc aagttcgccc aggagcaggt gcggaacttc gccgagcatc
     2761 agcgcgcggc cttgcaggat atcgaagtcg agacgctgcc gggcgtcgtg ctcgggcaca
     2821 agaacatccc ggtcaactcg gtcggctgct acgtgcctgg cggcaaatac ccgctgctcg
     2881 cgtcggcgca catgtcggtg atcactgcca aggtcgccgg cgtcgaccgc atcatcacct
     2941 gcgcgccgcc ctaccagggc aagccggcgc cggccatcgt cgccgcgcag catctcgccg
     3001 gcgccgacgt gatctactgc ctcggcggca tccaggcggt cggcgccatg gcgctcggga
     3061 cccaatcgat cgtgccggtc gacatgctgg tcggccccgg caatgcctat gttgcggagg
     3121 cgaagcgcca gctctacggc cgcgtcggca tcgacctgtt cgcgggcccg accgagacgc
     3181 tggtcatcgc cgacgagacg gtcgacggcg agctctgcgc caccgacctg ctcggccagg
     3241 ccgagcacgg gcccaactcg cccgcaatcc tgctcacgac ctccgaaaag ctcgcgcgcg
     3301 acaccatggc cgaggtggag cggctgctcg gcatgctgcc gaccgccgag atcgcacgca
     3361 aggcgtggga ggattgcggc gaggtgatcg tatgcgagtc cgaggaggag atggtgcggg
     3421 aggccgaccg catcgcctcg gagcacgtgc aggtgatgac gcgcgacccg gactatttcc
     3481 tcgacaacat gaccaattac ggcgcgctgt tcctcgggcc gcgcaccaat gtcagctacg
     3541 gcgacaaggt gatcggcacc aaccatacgc tgccgaccaa gaagtcggcg cgctacaccg
     3601 gcgggctgtg ggttggaaaa ttcctcaaga cggtcacgta tcagaaggtg ctcaccgacg
     3661 aggcctcggc gaggatcggc gaatactgct cgcgcctgtg catgctcgaa ggattcgccg
     3721 gccacgccga gcaggcgaat atccgcgtgc gccgctacgg cgggcgcaac atcccgtatg
     3781 cgacggcggc ggagtgagcg cgctcgtgag ccttccgacc acgccttcgt tcagcctcga
     3841 gggcaagcgc gcgctcgtga ccggggcggg tcgcggcatc gggctcgccg ccgcctcggc
     3901 cttcgccgcc gccggcgcgc acgtcaccct gatggcgcgc tcgcgcgacg agatcgagac
     3961 ggctgccgag cagatccgcg cgggcggcgg ctcggccgac gcgctgcacg gtgacgtgac
     4021 cgagatcgat gcgttcgagc aggcggtgca gcgcgccgcc ccctacgacg tctttttcaa
     4081 caatgccggc atgaaccggc cgcagccgtt catcgaggtc agcgtcgaga atttcgacac
     4141 catcatgggg ctcaacgtgc gggccgcatt cttcgcggcg caggcggtgg cgcgccggct
     4201 cgtcgccgcg caaaaggctg gctcgatcat caacatgtcg tcgcagatgg ggcatgtcgg
     4261 cgccgccggg cgcagcgtct actgcacctc gaaatgggcc atcgagggcc tcaccaaggc
     4321 gatggccgtc gagctcgccg agcaccgcat ccgcgtcaac acgatctgcc ccaccttcat
     4381 cgagacgccg atgacgcgcc ccttcctggc cgacccggcc ttcaaggacc gcgttctgtc
     4441 caagatcaag ctcggccgcc tcggcacggt cgaggacctg atgggagcgc tcgtcttcct
     4501 cgcgtccgac gcctcggccc tgatgaccgg ctcggccctc gtcgtcgatg gcggctggac
     4561 ggcggagtaa gaagcctctc ccgtttcgcg agcgggcagg gcgttacgcg cgcgtgctcg
     4621 tcttgtcggc gtagagctgg gcgtaggtgt cgcgcaggat gttcttctgc accttgccca
     4681 ttgtgttgcg cggcaggtcg tcgacgaaga tcacgcgctt cggcagcttg aacttggcga
     4741 gccggccttc aatggcggcg acgacctgct gctcgtcaag cctggcactt ttttcgggca
     4801 cgacgacggc cgtgacgcct tcgccgaaat cgggatgctg aacgccgatc acggcgctct
     4861 cgacgacgcc ggggatggcg tcgatctcgc tctcgacctc cttcggatag acgttgtagc
     4921 cgccggtgat gatcaggtcc ttgccgcggc cgacgatgtg cacgtagccg cgctcgtcga
     4981 tcttgccgag atcgcctgtg atgaagaagc cgtccttgcg gaactcggcg tcggtcttct
     5041 ccggcatgcg ccaataaccc ttga
//
LOCUS       DATAIQ010000578         2403 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_336143, whole genome shotgun sequence.
ACCESSION   DATAIQ010000578 DATAIQ010000000
VERSION     DATAIQ010000578.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2403)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2403)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2403
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_336143"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(392..1132)
                     /locus_tag="VHN20_09590"
     CDS             complement(392..1132)
                     /locus_tag="VHN20_09590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726058.1"
                     /translation="MADAPPEADELPPRAVREVLLDRAPATTREVEDRIPALTPPVGR
                     PADEPVETLPPPVSAELEALLLDVTVVEPEDPDVPPLVEPPEEDVLLCETWDDPPLPP
                     RIRLLLSRKLRLPRSWGVSKDANRSAEVVPLTRSVRSTGPFQTVAVRIATGPPDAVVD
                     AVSATGRRIHQAAPPSSVARTAANASRRKRRREGPGCTGAGTCTGDGRGAGSGAGLLL
                     MGYCIQDLSYDAGGTRCPLGINVLMLAK"
     gene            1149..2318
                     /locus_tag="VHN20_09595"
     CDS             1149..2318
                     /locus_tag="VHN20_09595"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX2726059.1"
                     /translation="MGSTSSRLSGGSAGPGAIGSSSGGGGGGRGGEDFSLVLQHLIKP
                     GTHVKKGQTVAEFDRESMLSRLEDYQASVAQTEASVRKLKAELDITRKAHQQTIEQAK
                     AALEKARLDVKTTPVLGTIDAERVKLALEEAQARYKQFLSEVKFVEVGYQSQIRAAEI
                     ELQQAHIEQKRIEANADKMILKAPIDGLTVMQSLFRGGEMAQIREGDQLYPGMMFMQI
                     VDLSSMIVNATVNQVDVESLRIGSRATIRFDAYPGLELPGRVYSIGAMTKPGGMRANF
                     VKEVPIMLKLDKLDARVIPDLSVSAEIIIATEEPPAVAPLSGIFRDGKGTPYVFVKQG
                     DRWAQRPVELGATSHVAAAVRSGLAPGDIIATDEPPPQQVRMETSRGAPPSEPAG"
BASE COUNT          434 a          823 c          750 g          396 t
ORIGIN      
        1 acgcgctcga atgccgagtt cctggctgcc atgtcgggct gatgctgccc ctcggcatgt
       61 ctggagcgtc accccggctg taaacccgct gggcagtcag gcgcccgtca ccgccgcatc
      121 gcacgccgcg cgtctcacat cggtctgaag tgccactcaa catgcctgtt ctgcgtacgg
      181 gacggtcgaa agttgcgtcc ccagccgcct ctggcgcatc ctgaataaaa gatggatggc
      241 agcgggctct ggccgtgtgc ctctacatgt atccgcccgc tcctgccacc ccgccctgaa
      301 ggggtctgtt cctgaacgaa gtcgaatgcc gccaggtctg ccggagcgaa attcacccgg
      361 tcggataacc tcgaaggctc gcgtatcgtc tttactttgc aagcatcaag acgtttattc
      421 cgagcgggca gcgtgtcccg cccgcgtcgt acgaaaggtc ctgaatgcag taccccatga
      481 gcagcagccc ggctccggac ccggcgcccc gaccgtcccc tgtgcaggtg ccggcccccg
      541 tgcacccggg cccttcgcgc cgccgtttcc gcctgctggc gtttgccgcc gtccttgcca
      601 cgctgctcgg gggagccgcc tggtggattc ggcgtcccgt cgcagaaaca gcgtccacca
      661 cggcatcggg tggtccggtc gcgatccgca cggccacggt ctggaaaggg ccggtcgaac
      721 ggacactgcg cgtcagcggt acaacctcgg ctgaacggtt cgcgtccttg ctcacccccc
      781 agcttcgcgg cagccgcagc ttccgtgata gcagcagccg gattcgtggc ggcagcggcg
      841 gatcgtccca ggtttcgcag agcaacacgt cctcctcggg cggctccacc agcggcggca
      901 cgtccggatc ttcgggttcg accaccgtca cgtcgagcag cagtgcttcc agctcggccg
      961 atacaggagg cggcagcgtc tcgaccggct cgtccgccgg cctaccaacc ggaggcgtga
     1021 gcgccggaat gcggtcctcg acttcgcgcg tcgtcgccgg cgcgcggtcg agcagtacct
     1081 cccgcacggc gcgcggcggc agttcatcgg cctcgggcgg cgcgtccgcc accctcggat
     1141 ccgatggctt gggctcgaca tcgagccggt tgtccggtgg ctcggcgggg cctggagcga
     1201 tcggcagcag cagtggcggc ggcggtggcg gccggggcgg agaggacttc tcgctcgtcc
     1261 ttcaacacct catcaagccg ggaacccatg tcaaaaaagg acagaccgtc gccgagttcg
     1321 accgcgagag catgctgtcg cgcctcgaag actaccaggc gtcggtcgct caaaccgagg
     1381 cgagcgtcag gaagctgaaa gccgagctcg acatcacgcg caaggcacac cagcagacga
     1441 ttgaacaggc aaaggcagca ctcgaaaagg ctcgtctcga tgtcaagacc acgcccgtgc
     1501 tcggcaccat agacgctgag cgcgtcaagc ttgcgctcga ggaagctcag gcgcgctaca
     1561 agcagttcct ctcggaagtc aagttcgtcg aggtcgggta tcaatcgcag attcgagccg
     1621 ccgagatcga gctccagcag gcacacatcg aacagaaacg catcgaggcg aacgccgaca
     1681 agatgattct caaagcgccc atcgacggcc tcactgtcat gcagagtctc ttccggggcg
     1741 gcgaaatggc gcagattcgc gagggcgacc agctttatcc cgggatgatg ttcatgcaga
     1801 ttgtcgacct ctcgtcgatg atcgtgaatg ccaccgtcaa ccaggtcgat gtcgagtcgc
     1861 tgcgcatcgg atcgcgtgcg acgattcggt ttgacgccta tcccggactg gaacttcccg
     1921 ggcgcgtcta ctcgatcggt gccatgacca agcccggcgg catgcgcgcc aacttcgtca
     1981 aagaagtacc gatcatgctc aagctcgaca agctcgacgc gcgcgtgatt cccgatctct
     2041 cggtcagcgc cgagatcatc atcgccaccg aggagccccc tgctgtggcg ccgctcagcg
     2101 ggattttccg cgacggcaag ggcaccccct acgtcttcgt gaagcagggt gaccgctggg
     2161 cgcagcgccc ggtcgaactc ggcgccacca gccatgtcgc cgccgccgta cgctcgggcc
     2221 ttgcgcccgg cgacatcatt gccaccgacg agccgccgcc gcagcaggtt cgcatggaaa
     2281 ccagccgcgg agcgccgccg tcggagcccg ccgggtaacc ggggtttctc gcaaacgagc
     2341 agtcaggatc gaccaacgat gtccaaggat ataaagccaa agcacagact cggccagacg
     2401 gcg
//
LOCUS       DATAIQ010000579         2666 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_29674, whole genome shotgun sequence.
ACCESSION   DATAIQ010000579 DATAIQ010000000
VERSION     DATAIQ010000579.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2666)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2666)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2666
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_29674"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..397)
                     /locus_tag="VHN20_09600"
     CDS             complement(<1..397)
                     /locus_tag="VHN20_09600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012452633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YqaA family protein"
                     /protein_id="HEX2726060.1"
                     /translation="MFRRLYDWTLALASRPAAPWALGAVSFAESSFFPVPPDVMLVPM
                     ALARPDRVWSYALIMTLTSVVGGMAGYAIGALLYESLGQWLFRLYGLSEGAEAFRAGY
                     AHYGHWVILLKGLTPIPYKLVTITSGFAGY"
     gene            complement(416..1099)
                     /locus_tag="VHN20_09605"
     CDS             complement(416..1099)
                     /locus_tag="VHN20_09605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018266167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HEX2726061.1"
                     /translation="MAPTLAGPRLAPRSGTAKQLVVFLHGYGADGNDLIEIGRQWQRW
                     LPDAAFVSPHAPEPCTGAPMGRQWFPLTFRDPDERWRGVNHAAPALGAFLDAELGRLG
                     LDAGRLALVGFSQGTMMALHVGLCRERAPAAILGYSGMVVVDESGGPESLKGQIRSKP
                     PILLLHGDNDDVIPIDALFLSADALAAADVPVEWHLSRGMAHGIDGEGLRQGGLFLTR
                     AFGLPYPAA"
     gene            complement(1280..1930)
                     /locus_tag="VHN20_09610"
     CDS             complement(1280..1930)
                     /locus_tag="VHN20_09610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase 2 family
                     protein"
                     /protein_id="HEX2726062.1"
                     /translation="MLILDSDAVLARGLRSLTRRDPVIKRMVAEGARPPLRKREPGFE
                     GLARIIVSQQLSTASAGAIWARLTGRFPEISPADITSASDEDLRAAGLSAPKMRTLRA
                     IAAAIASGALPIDRLGDMGADEAHAVLTTVKGIGPWTADIYLLFCLGHPDAFPAGDLA
                     LQEAARLAYDLAARPKEQEFVALAERWRPWRGVAAKVLWAYYRVAKSREGAPVTSP"
     gene            2034..>2666
                     /gene="gluQRS"
                     /locus_tag="VHN20_09615"
     CDS             2034..>2666
                     /gene="gluQRS"
                     /locus_tag="VHN20_09615"
                     /EC_number="6.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA glutamyl-Q(34) synthetase GluQRS"
                     /protein_id="HEX2726063.1"
                     /translation="MSQPVFRFAPSPNGRLHLGHAYSALLNADLAARWGGRFLLRIED
                     IDVTRCRAEFEAAIHDDLAWLGLSWEPPVRRQSEHLDAYRAPAQTLKGRGVLYPCFCT
                     RRQIAVAVAGKEQDAPWPRDPDGASLYPGTCRGLAGSEVARRVAAGEPHAWRLDMAAA
                     LRRAPGPQRIHRFALSGEQDTIAAQPARWGDAVIVRKEIPTSYHLSVTVDD"
BASE COUNT          443 a          895 c          960 g          368 t
ORIGIN      
        1 cgtagccggc gaagcccgac gtgatggtga cgagcttgta ggggatcggg gtcaggcctt
       61 tcaggaggat cacccaatgg ccgtaatggg catagccggc ccggaacgcc tcggcgcctt
      121 cgctcaggcc atagagccgg aagagccact gcccgagcga ctcatagagg agggcgccga
      181 tggcgtagcc ggccatcccg cccaccaccg acgtcagcgt catgatcaac gcgtagctcc
      241 agacccggtc ggggcgggcg agcgccatcg gcaccagcat cacgtcgggc gggaccggaa
      301 agaaagagct ttcggcgaac gacacggcac cgagggccca gggcgcggca ggccgcgagg
      361 cgagagccag agtccagtcg tagaggcgtc ggaacatgga tggccgcgtc ctgtttcacg
      421 ctgcgggata aggcagaccg aaggcgcgcg tcagaaacag gccgccctga cgcaggcctt
      481 cgccgtcgat gccgtgcgcc atgccgcggg acaggtgcca ctcgaccggc acgtcggcgg
      541 cggcgagcgc atcggcggac aggaacagcg cgtcgatcgg gatgacgtcg tcgttgtcgc
      601 cgtgcagcag caggatcggc ggcttcgacc ggatctggcc tttgaggctt tccggcccgc
      661 cgctttcgtc cacgaccacc atgccggaat agccgagaat cgccgccggg gcgcgctcgc
      721 ggcacaagcc gacatgcagg gccatcatgg tgccctggct gaacccgacc agggcgagcc
      781 tccccgcgtc gagcccgaga cggccgagct cggcgtcgag aaaggcgccg agcgccggcg
      841 ccgcgtgatt gacgccgcgc cagcgctcgt ccggatcacg gaaagtgagg ggaaaccatt
      901 gccggcccat gggtgcgccg gtgcaaggct cgggcgcatg cggcgacacg aaggcggcgt
      961 ccggcagcca gcgctgccat tgccgcccga tctcgatcag atcgttgccg tcggcgccat
     1021 agccgtgcag gaacacgacc agctgcttgg ccgtgcccga gcgaggcgcg agacggggac
     1081 cggcgagggt aggggccatg gcttccttca tccgggcgca acccggtcac gggaggtttg
     1141 gggttcctgt gcgggtttgc ggcgagcggt caagcccgca ttcgcgcgat caacggccgg
     1201 ctgcatgatc cggcgcaagc tggccggggt cggggagggg agacggcgtc gccgacgatc
     1261 ctcatgcgct caacgaggat cagggcgaag ttacgggcgc gccctcgcgt gacttggcga
     1321 cgcggtaata ggcccacagt accttggccg cgacgccgcg ccacggccgc caacgctcgg
     1381 caagggcgac gaattcctgc tccttgggac gcgccgcgag gtcgtaggcg aggcgcgccg
     1441 cttcctgcaa cgcgagatca ccggccggga acgcgtcggg gtggccgagg cagaacagga
     1501 gatagatgtc cgccgtccac ggcccgatgc ccttgacggt cgtgagtacg gcatgcgcct
     1561 cgtcggcgcc catgtcaccg aggcggtcga tcggcagcgc gccggaggcg atcgcggccg
     1621 cgatggcgcg cagcgtgcgc atcttgggag ccgagagacc cgcggcgcgc aggtcctcat
     1681 cggacgcgct cgtgatatcg gcgggagaga tctcgggaaa acgcccggtc aggcgcgccc
     1741 agatggcgcc cgcgctggcg gttgaaagct gctgggagac gatgatccgg gcgaggccct
     1801 cgaatcccgg ctcacgcttg cgcaaaggcg ggcgcgcacc ctccgcgacc atccgcttta
     1861 tgaccgggtc gcggcgggta agggacctga gtccgcgcgc gagcaccgcg tccgaatcga
     1921 gaatgagcat gccaggaacc cgaagtcaga ggccggaggc cagagatcag atactacatg
     1981 tgagcggaac cccgttcgcg actccgacct gacttctggt atctgacccc agcatgtcgc
     2041 aaccggtctt ccgcttcgcg ccgagcccga acggccgcct ccatctcggg cacgcctatt
     2101 cggccctcct caacgccgac ctggcggcgc gctggggcgg ccgcttcctg ctgcgcatcg
     2161 aggacatcga cgtgacccgc tgccgcgcgg aattcgaggc cgccattcat gacgatctcg
     2221 cctggctcgg gctgtcgtgg gagccgcccg tgcgccgcca gtccgagcac ctcgatgcct
     2281 atcgcgcgcc agcgcaaacg ctgaagggaa gaggagtcct ttatccgtgc ttctgcacgc
     2341 gccggcagat cgctgtcgcc gtcgccggga aggagcagga tgcgccgtgg ccgcgcgacc
     2401 cggatggcgc ttccctctat ccaggcacgt gccggggcct ggccggctcc gaggtggcgc
     2461 gccgggtggc cgccggcgaa ccgcatgcct ggcgcctcga catggccgcg gctctgaggc
     2521 gggcgccggg accgcagcgc atccatcgct ttgcgttgtc cggcgagcag gacaccatcg
     2581 cggcgcagcc ggcgcgctgg ggcgatgccg tgatcgtgcg caaggagatc ccgacgagct
     2641 accacctgtc ggtcacggtg gatgat
//
LOCUS       DATAIQ010000580         2315 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_29682, whole genome shotgun sequence.
ACCESSION   DATAIQ010000580 DATAIQ010000000
VERSION     DATAIQ010000580.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2315)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2315)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2315
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_29682"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            44..1324
                     /locus_tag="VHN20_09620"
     CDS             44..1324
                     /locus_tag="VHN20_09620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007595995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0015556 - C4-dicarboxylate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015740 - C4-dicarboxylate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HEX2726064.1"
                     /translation="MTIAVFVGSLLGAMALGMPIAYALLLCGVALMYYLDMFDAQIIA
                     QNVINGADSFPLMAVPFFMLAGEIMNTGGLSKRIVNVALAAVGHVKGGLGYVAIVAAC
                     ILSALSGSAVADAAALSALLVPMMVQAGHDKARAGGLIAASGIIGPVIPPSIGFVIFG
                     VVANVSITKLFLAGIIPGILIGIGLAFAWWWEVRKENIVSPPKRSRGELGRAVLDGFW
                     ALMLPLIIIFGLKFGVFTPTEAAVVAAVYSLVIAVFVYRELKPSELYAVFVTAAKTTA
                     IVMFLVAAALVSAWMITVSEVATSVVDLLRPFMGNQTLLLIAIMVLVVIVGTAMDMTP
                     TILILTPILMPVIKAAGIDPVYFGVLFIVNNSIGLITPPVGTVLNVVAGVARINMEDL
                     IKGVWPFMLAELVVLFLMVLFPSLVMWPARLLGG"
     gene            1467..>2315
                     /locus_tag="VHN20_09625"
     CDS             1467..>2315
                     /locus_tag="VHN20_09625"
                     /inference="COORDINATES: protein motif:HMM:NF015445.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HEX2726065.1"
                     /translation="MTRIKMLLASLLAGSVGLLAQSADAQISDRTLRWAQQNSLEHPQ
                     GQGSKKFADLVEQKSGGKIKVRIFPSGQLGGDLQNVSALQGGTLDLMVLNAGLLVGIV
                     KDFAVVDLPFLFNTPEEADAVVDGPVGKKLFDKISDKGLVGPGYFELGFRNVTNSRRA
                     ITKLEDFQGLKLRVLQSPLFIELFNTLGANTVAMPFPEVYPALEQKVIDGQENPYTVI
                     FDSKFQEVQKFGSATRHIYNPQSVLVSKRTWDKLSGEEKKIIQEAMDEAKVYQRQVSR
                     QKADEAL"
BASE COUNT          360 a          759 c          761 g          435 t
ORIGIN      
        1 ccgccgcctc cgcgcccctc ggctcgcaca aggggtagcc gccatgacga tcgccgtctt
       61 cgtcggctcg ctcctggggg cgatggccct cggcatgccg atcgcctatg cgctgctgct
      121 ctgcggcgtc gcgctgatgt attatctgga catgttcgat gcccagatca tcgcgcagaa
      181 cgtgatcaac ggcgccgact cgttcccgct catggcggtg ccgttcttca tgctggccgg
      241 cgagatcatg aataccggcg ggctgtcgaa gcgcatcgtc aacgtcgccc tcgccgccgt
      301 cggccatgtc aagggcggcc tcggctatgt ggcgatcgtc gccgcctgca tcctgtcggc
      361 gctgtccggc tcggcggtcg ccgacgctgc cgcgctgtcg gcgctgctcg tgccgatgat
      421 ggtgcaggcc ggccacgaca aggcgcgggc cgggggcctg atcgccgcgt cgggcatcat
      481 cggcccggtc attccgccct ccatcggctt cgtgatcttc ggcgtcgtcg ccaacgtctc
      541 gatcaccaag ctgttcctgg ccggcatcat tccgggcatc ctgatcggca tcggcctcgc
      601 cttcgcctgg tggtgggagg tgcgcaagga gaacatcgtc agcccgccca agcggtcgcg
      661 gggcgagctc gggcgcgccg tcctcgacgg cttctgggcg ctgatgctgc cgctgatcat
      721 cattttcggg ctcaagttcg gcgtgttcac gccgacggag gcggcggtgg tggccgcagt
      781 ctactccctg gtcatcgccg tcttcgtcta ccgcgagctg aagccgtccg agctttatgc
      841 ggtcttcgtc accgcggcca agacgacggc gatcgtcatg ttcctggtcg ccgccgccct
      901 ggtttcggcg tggatgatca cggtgtccga ggtcgcgacg agcgtcgtcg atctgctgcg
      961 gccgttcatg ggcaaccaga cgctgctcct gatcgccatc atggtgctcg tggtgatcgt
     1021 cggcaccgcc atggacatga cgccgaccat cctgatcctc acgccgatcc tgatgccggt
     1081 catcaaggcg gccgggatcg acccggtcta tttcggcgtg ctgttcatcg tcaacaactc
     1141 gatcggcttg atcacgccgc cggtcggcac cgtgctcaac gtcgttgccg gcgtggcgcg
     1201 catcaacatg gaagatctga tcaagggcgt gtggccgttc atgctcgccg agctcgtggt
     1261 gctgttcctg atggtgctgt tccccagcct cgtcatgtgg cccgcgcgcc tgctcggcgg
     1321 ctagctcatt ccctctccag cttctcggga gagggtcagg gtgagggggg aagtgaagaa
     1381 ccgcggagac ggccgtgtcc cggccggctt cgccaacgtg acgtctcccg cggcgcggga
     1441 gagggtgaac ttggagggaa agtctcatga cgcgtatcaa aatgctttta gcgtcgctgc
     1501 tcgccggcag cgtcgggctt ctggcgcaaa gcgccgatgc ccagatctcg gaccggaccc
     1561 tgcgctgggc gcagcagaac tcgctggagc atccgcaagg gcagggctcc aagaagttcg
     1621 ccgacctcgt cgagcagaag agcggcggca agatcaaggt gcgcatcttc ccgagcgggc
     1681 agctcggcgg cgacctgcag aacgtgtcgg cgctgcaggg cggcacgctc gacctgatgg
     1741 tgctgaacgc cgggctgctg gtcggcatcg tcaaggattt cgcggtcgtc gacctgccgt
     1801 tcctgttcaa cacgccggaa gaggccgacg ccgtcgtgga cggcccggtc ggcaagaagc
     1861 tgttcgacaa gatctccgac aaggggctcg tcggccccgg ctatttcgag ctcggcttcc
     1921 gcaacgtcac caacagccgg cgcgccatca ccaagctcga ggatttccag ggcctgaagc
     1981 tgcgcgtgct gcagtcgccg ctgttcatcg agctgttcaa cacgctcggc gccaacacgg
     2041 tcgccatgcc gttcccggag gtctacccgg ccctcgagca gaaggtcatc gacggccagg
     2101 agaacccgta cacggtgatc ttcgattcga agttccagga ggtgcagaag ttcggctcgg
     2161 cgacgcggca catttacaac ccgcaatccg tcctggtcag caagcgcacc tgggacaagc
     2221 tctcgggcga ggagaagaag atcattcagg aagcgatgga cgaggccaag gtctaccagc
     2281 gccaggtctc gcgtcagaag gccgacgagg cgctg
//
LOCUS       DATAIQ010000581         1551 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_244597, whole genome shotgun sequence.
ACCESSION   DATAIQ010000581 DATAIQ010000000
VERSION     DATAIQ010000581.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1551)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1551)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1551
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_244597"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..558)
                     /locus_tag="VHN20_09630"
     CDS             complement(<1..558)
                     /locus_tag="VHN20_09630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018315561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX2726066.1"
                     /translation="MLVESPGRRAWRRLVRRRGAMVGLGVIVLVIAVAVLAPLIAPYD
                     PTQQSWTAVRKPPSAAHWLGTDEVGRDLLARVIFGARASLSAGVISVAIAICVGVPLG
                     LLAGYVGGLIDGLISRMTDAMLACPFLILAIALAAFLGPSLTNAMIAIGITATPLFVR
                     LTRGQVLSVKAEDYVEAARAVGNPHW"
     gene            complement(651..>1551)
                     /locus_tag="VHN20_09635"
     CDS             complement(651..>1551)
                     /locus_tag="VHN20_09635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015668176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX2726067.1"
                     /translation="TLFLVSVLIFSLQQLLPGDPALVMAGEEKDPEVIEQIRRQYRLD
                     QPLPIQYFYWIGGVLTGDLGESMRLKAPVLDLILQKLPVTLQLATMAMIIALTIGVSA
                     GVISAVKKDTVWDYAVNVVSLWGISTPNFWLGIMLIFLFAVTLGWLPASGYVSPWEDW
                     RQSLATTIMPAFVLGNAIAGVIMRHTRSAMLQALQSDYVRTARAKGLSERTVVLKHAM
                     RNALTPVITLGALEFGTLLSGAVLTEQIFTIPGFGKLIVDAVFNRDYAVVQGVVLVTA
                     TTYIMLNLLADLGYVLVNPRLRS"
BASE COUNT          290 a          526 c          522 g          213 t
ORIGIN      
        1 ccaatgcgga ttgccgacgg cgcgcgccgc ctcgacgtaa tcctcggcct tgaccgaaag
       61 cacctgcccg cgcgtcaggc gcacgaacag cggcgtcgcc gtgatgccga tggcgatcat
      121 cgcattggtg aggctcggcc cgaggaaggc ggcgagcgcg atcgccagga tcaggaacgg
      181 gcacgccagc atggcatcgg tcatgcggct gatgagccca tcgatcagcc cgcctacata
      241 accggcgagc agcccgagcg gcacgccgac gcagatggcg atggcgacgg agatcacgcc
      301 cgccgaaaga gaggcgcgcg ccccgaagat gacgcgggcg agaagatcgc ggccgacctc
      361 gtcggtcccc agccaatgcg ccgccgaagg cggcttgcgc accgccgtcc agctctgctg
      421 cgtcggatcg tagggcgcga tcagcggcgc caagaccgcg acagcgatca cgagaacgat
      481 gacgccgagc cccaccatgg cgcctctgcg gcgcacgagc cggcgccacg cgcgccggcc
      541 tgggctctcg accagcacgg cctcggctgc atccgggctt tcctccggcg cgcccagacc
      601 ggtgcgcgac ggcgccacgc tttcatgccg gatcgtgggc gccgcaccgg tcacgaccgc
      661 agcctcggat tgaccagaac gtagccgaga tcggcgagca agttgagcat gatgtaggtg
      721 gtggccgtga cgagcacgac gccttgcacc acggcgtagt cgcggttgaa cacggcatcg
      781 acgatcagct tgccgaagcc cgggatcgtg aagatctgct cggtcagcac ggcgcccgag
      841 agcagcgtcc cgaactcgag cgcgcccagc gtgatcaccg gcgtgagcgc attgcgcatg
      901 gcatgcttga gcacgaccgt gcgctcgctg agccccttgg cgcgcgccgt gcgcacgtaa
      961 tcgctctgca acgcctgcag catggcgctg cgcgtgtggc gcatgatcac ccccgcgatg
     1021 gcgttgccga ggacgaaggc cggcatgatc gtggtggcga ggctctgccg ccagtcctcc
     1081 caggggctca catagccgga tgcgggcagc cagccgaggg tcacggcgaa caggaagatg
     1141 agcatgatcc cgagccagaa attcggcgtc gagatgcccc acaaggacac cacgttgacg
     1201 gcgtagtccc agacggtgtc cttcttgacg gccgagatca cgccggcgct gacgccgatc
     1261 gtcagcgcga tgatcatcgc catcgtcgcc agctgcagcg tgacggggag cttctgcagg
     1321 atcaggtcga ggaccggagc cttgaggcgc atggactcgc cgagatcgcc ggtgagcacg
     1381 ccgccgatcc aataaaaata ttggatcgga agcggctgat cgagacggta ttgccggcgg
     1441 atctgctcga tcacctccgg gtccttctcc tcgcccgcca tcaccagcgc cgggtcgccc
     1501 ggcaacagct gctgcagcga gaagatcagc accgacacga ggaacagcgt c
//
LOCUS       DATAIQ010000582         2020 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_152481, whole genome shotgun sequence.
ACCESSION   DATAIQ010000582 DATAIQ010000000
VERSION     DATAIQ010000582.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2020)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2020)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2020
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_152481"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..726)
                     /locus_tag="VHN20_09640"
     CDS             complement(<1..726)
                     /locus_tag="VHN20_09640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018322774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX2726068.1"
                     /translation="MTSRAHTAAARPLSGTVAFLAPLVALVAIWQATVTIFNVHPGVF
                     PGVPAVVRAGMESIRDGSLFMHIGASFARVLVGTALALVAAIPLGIAMGISPVVSSLL
                     TPLFRFFSVLAGIAWIPIATLWFGYGFGAITFVIFNAVFFIVAYNTLLGVSTIPMPLR
                     NAAASLGAGRFAMLTQVLLPGALPNIVTGIRTGLGFAWRGLIAAEMIATNVGLGYMLF
                     LARDFYRTEVIIFGMIVIGVLWLL"
     gene            complement(932..1657)
                     /locus_tag="VHN20_09645"
     CDS             complement(932..1657)
                     /locus_tag="VHN20_09645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010915041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX2726069.1"
                     /translation="MPVSYDFSGRAAVVTGGSKGIGRAIAERLLDAGARVWSWDLEPT
                     ANALLQHVPVDVTDSEQISGALARVLREDARIDILVNNAGFIGGTRPVEELDPADWRR
                     IVDVNLTGVFDVSRQVVPVMRRAGWGRIVNIASLAGKEGTPGLSAYSAAKAGVIALTK
                     SLGKELADTEIRVNCVAPAAVATDILAQMDPKAVEVMIEKSPLKRLGTVDEVADLVMW
                     LCSEACSFSTGAVFDLSGGRATY"
     gene            complement(1723..1845)
                     /locus_tag="VHN20_09650"
     CDS             complement(1723..1845)
                     /locus_tag="VHN20_09650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726070.1"
                     /translation="MSAVQVVTAPDAVFDGRMRWHDNEQTLIMSLLDHAMAVRR"
BASE COUNT          383 a          677 c          648 g          312 t
ORIGIN      
        1 gagaagccac aggacgccga tcacgatcat gccgaagatg atcacctcgg tgcggtagaa
       61 gtcgcgggcc aggaacagca tgtagccgag cccgacattg gtggcgatca tctcggccgc
      121 gatgagcccg cgccaggcga agccgaggcc ggtgcggatg cccgtgacga tgttgggcag
      181 cgcgcccggc aggagcacct gcgtcagcat cgcgaagcgt ccggcgccga gcgaggcggc
      241 ggcgttgcgc agcggcatcg ggatggtcga gactccgagc agcgtgttgt aggcgacgat
      301 gaagaagacg gcgttgaaga tcacgaaggt gatcgcgccg aagccgtagc cgaaccacag
      361 ggtggcgatc ggaatccagg cgattccggc gagcaccgag aagaaccgga acagcggcgt
      421 caggaggctc gacacgaccg ggctgatgcc catggcgatc ccgagcggga tcgcggcgac
      481 gagcgccagc gccgttccga cgaggacgcg ggcgaagctc gcgccgatat gcatgaagag
      541 cgatccatcg cggatgctct ccatccccgc gcggacgacc gccggcacgc cggggaagac
      601 gccgggatgc acgttgaaga tcgtgaccgt tgcctgccag atcgccacga gagcgacgag
      661 tggcgccagg aacgccaccg tccctgacaa cggcctggcg gcggcggtgt gcgctcgtga
      721 cgtcacttgt ctacgcgccc gcaccatggg tgggacgcaa acctttcaga ggcgcatcca
      781 tgctatcgtc ctggggtctg ggaaacgcgt gaatacgaac cccgcgccag tgatgaacgc
      841 aacgccagcg atgatggcgc ctcgtcacaa cccgttgcga gagccactga cgatagcccg
      901 caccccgcaa agccccaaca tcgatcaagg tctaatacgt cgctcgtccc ccggaaaggt
      961 cgaacacggc gcccgtgctg aacgagcatg cctccgaaca gagccacatc acgagatcgg
     1021 ctacctcatc caccgtcccc agccgcttca gcgggctctt ctcgatcatg acctcgacgg
     1081 ccttcggatc catctgcgcg aggatgtcgg tggcgacggc ggcgggagcg acgcagttca
     1141 cccgtatctc ggtgtcggcc aactctttcc cgagtgattt cgtcagggcg atcacgccgg
     1201 ccttggcggc ggagtaggcc gacaggcccg gcgtgccttc cttcccggcg agagaagcga
     1261 tgttgacgat gcggccccag ccggcacgcc tcatcaccgg caccacctgc cgcgacacgt
     1321 cgaagacgcc cgtgaggttc acgtcgacga tccgccgcca gtcggcggga tcgagctcct
     1381 cgaccggccg ggttcctccg ataaagccgg cattgttgac gaggatgtcg atccgggcgt
     1441 cctcgcgcag cacgcgggcg agcgctccgg aaatctgctc cgaatccgtc acatccaccg
     1501 gcacatgttg cagaagagcg ttcgcggtcg gctccaggtc ccaggaccac acccttgctc
     1561 ccgcgtcgag gagccgctcc gcaatcgcgc gaccgattcc cttcgacccg ccggtcacga
     1621 cggcggctcg tccagagaag tcgtaggaga ccggcatgaa tgtacccttt ccacgtggtc
     1681 gctccgcaat aaaggcagta tcgtaggagc gtcaggagcc ttttatctgc ggactgccat
     1741 ggcgtggtcc aacaacgaca tgatcaacgt ctgctcgttg tcgtgccagc gcatgcggcc
     1801 gtcgaagacg gcgtcgggcg cagtgacgac ctggactgcg gacatctttt tccccgcaga
     1861 gccctttcag tttgaacccc gcgcgcatgc cgcgcacttg gcaacgtctt ccatttgatc
     1921 agcatgaacc ttcctccttc agcggcgccg cggcccggct cagaggccgc ggccgggcag
     1981 ggtggcgaac acgccctccg ccgcgtcctt cgccatctcc
//
LOCUS       DATAIQ010000583         3085 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_307155, whole genome shotgun sequence.
ACCESSION   DATAIQ010000583 DATAIQ010000000
VERSION     DATAIQ010000583.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3085)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3085)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3085
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_307155"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            497..1054
                     /locus_tag="VHN20_09655"
     CDS             497..1054
                     /locus_tag="VHN20_09655"
                     /inference="COORDINATES: protein motif:HMM:NF024853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HEX2726071.1"
                     /translation="MRLPVEVTSELDDLVGVIWTGADSHVLTVVEFFDYNCPHCRRAM
                     PDLHALLQEMRDLRVGLVNNPILSADSAQAAQVELAVLRLGGPGPAYEFHRRLFGRRG
                     VIGRDKALDVAAELGAPMTDVERLADAPDIRSASSDQMRLAASLGMAATPSFLIAGAG
                     LLGYPGPLSLARIINSVRHCAQIAC"
     gene            1266..1412
                     /locus_tag="VHN20_09660"
     CDS             1266..1412
                     /locus_tag="VHN20_09660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726072.1"
                     /translation="MKRVSAETSADQLRRDFRIFSEKGFLAAIGITILFGAIVAGVIL
                     YGTL"
     gene            1483..2100
                     /locus_tag="VHN20_09665"
     CDS             1483..2100
                     /locus_tag="VHN20_09665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011090437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine hydrolase"
                     /protein_id="HEX2726073.1"
                     /translation="MGDLLLEPVPASAVHLCVDMQRIFSSEGPWPTPWMERVLPTVTR
                     IAERFPERTVFTRFVTPETPDKASGRWRTYYEKWRDTTRDRLDPRLLELMPPLAALAP
                     PAQVFDKPVYSAFAGRKLHQHLQERGADTVIVTGAETDVCVLATVIGAVDHGYRVILV
                     TDAVCSSSDDHHDALLKLYSERYSLQIETCEAETIISQWHEGTRG"
     gene            2159..>3085
                     /locus_tag="VHN20_09670"
     CDS             2159..>3085
                     /locus_tag="VHN20_09670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit A"
                     /protein_id="HEX2726074.1"
                     /translation="MGYVQVRGAREHNLKNVDVDLPRDALVVFTGVSGSGKSSLAFGT
                     LYAEAQRRYLESVSPYARRLFHQMAVPEVDDIEGLPPAVALQQQRGSPTTRSSVGSVT
                     TLSNLLRMLYSRAGEYPPGQELLYAESFSPNTPEGACPTCHGLGRVYEATERSMVPDD
                     SLTIRERAIAAWPTAWHGQNLRDIAVTLGYDVDRAWRDLPRKDRDWLLFTDEQPTVPV
                     YAGYTPAEVRRALKRKEEPSYQGTFTGARRHVLSTFANSESPLMKKRAARYMISTDCP
                     LCHGKRLRQDALSVKFEGLDIADMSSLPLGRLA"
BASE COUNT          505 a         1043 c         1028 g          509 t
ORIGIN      
        1 acgtgccgat gacgccgcct ccaatgacga cgacgcgggc gcgatccggc agcgcgacgg
       61 ccacgggcac ctcagtcctg cgagcctgcg gccgcgccgg gggcgccgat cgccggacgc
      121 ccgagaggcg cgcagccgcg cgcgggcgca gtcccgagtc cctcgacaag gctgatgcat
      181 ttccgaagtt gcatgcggtc accacctgga acgcgaaaaa cgccgaagcc aataagcccc
      241 ttgcgggcgg agttcaacgt tcgcggcagg cccgccgacg ggggccggga atcgacgacc
      301 gaacatccca ttggcgtaaa gccccggcga tgatagggcg cgcgggacga tagtgagcga
      361 tccaatgatg atctcgaggc gcaacctgct tgccggcggc acgagcgttc ttgcggctcg
      421 cgcaggtcgg gggcgggcgc aggaggccgg ccagtggttt gcggtcacgg gagatgacgg
      481 caagccggtg ccgaatatgc gcctgcccgt cgaagtcacg tcggagctgg acgacctggt
      541 gggcgtgatc tggaccggtg ccgactcgca tgtgctcacc gtcgtggagt tcttcgacta
      601 caattgcccc cactgccgca gggcgatgcc cgatctccac gcgctgctgc aggagatgcg
      661 cgacctccgg gtcgggctgg tcaacaaccc catcctgtcc gcggattccg cgcaggcggc
      721 ccaggtggag cttgcggtgc tgcgcctggg cgggcccggg ccggcctatg aatttcaccg
      781 gcgcctcttc gggcggcgcg gtgtgatcgg ccgcgacaag gcgctcgacg ttgctgcaga
      841 gctcggggcc cctatgaccg acgtggaacg gctcgccgac gccccggaca tccgctcagc
      901 ttcgtccgac cagatgcggt tggccgcctc cctcggcatg gcggcaacgc cgtcgttcct
      961 catcgccggg gcgggccttc ttggatatcc cggcccgctg tcgctcgcgc ggatcatcaa
     1021 ctcggtacgg cattgcgcac aaattgcctg ctgactccgt gcggcgcgga cgaggtctcc
     1081 agcgcccctt cgcgcatgca gctcctccac ggccgcgcat gcatcccacc gagggccccg
     1141 gagcagcttt agccccgctt gacactgcct cttgggcgtc cgtgacggct tcccggcgga
     1201 acctccggat aagcctcgcg ttttcctgct cgcgggatgc ggtcagcaag tctcagagtg
     1261 gcgtaatgaa gcgggtgtca gcggaaacgt cggcggatca gctacggcgg gacttccgca
     1321 tcttctcgga gaagggcttt ctggcagcca tcggaattac gatcctgttc ggggccattg
     1381 tagccggcgt catcctctac ggaaccttgt agccgaggcg tacgtttccg cccttggcca
     1441 cgtcgctcgg cggcgcctgc gaaagcagaa agaacagggt ggatgggcga tcttctgctt
     1501 gagccggttc ccgcgagtgc ggtccatctg tgcgtcgaca tgcagcgcat attctcgtcc
     1561 gaagggccgt ggccgacgcc gtggatggaa cgcgtgctgc cgacggtcac ccgcatcgcc
     1621 gaacgatttc ccgagcgcac cgttttcacg cgcttcgtca cgccggaaac gccggacaag
     1681 gcgtccggca ggtggcgcac atattatgag aagtggcgcg acaccacccg cgatcgcctc
     1741 gacccgcgcc tgctcgagct catgccgccc ctggccgccc tggccccgcc cgcgcaggtt
     1801 ttcgacaagc ccgtgtattc ggccttcgcc gggcgcaagc tgcaccagca cctgcaggag
     1861 cgcggcgccg acaccgtgat cgtcaccggg gcggagacgg atgtgtgcgt gctcgcgacc
     1921 gtgatcggcg ccgtcgacca cggctatcgg gtgatcctcg tcaccgacgc cgtgtgcagc
     1981 tcgtcggacg accatcacga cgcgctgctg aagctctata gcgagcgcta cagccttcag
     2041 atcgagacat gcgaggccga gacgatcatt tctcagtggc acgagggaac gcgcggatga
     2101 agcagctctc tgcgtcggcc gttgaccggg aaatcggggc caagtgaagg accaacgaat
     2161 gggttacgtg caggtccggg gcgctcgcga gcacaatctc aagaatgtcg acgtcgatct
     2221 gccgcgcgac gccctcgtcg tgttcaccgg cgtgtccggc tccggcaaat cgtcgctggc
     2281 tttcggcacg ctctacgcgg aggcgcagcg gcgctatctc gagtcggtct cgccgtatgc
     2341 caggcgcctg ttccatcaga tggccgttcc ggaggtcgac gacatcgagg ggctgccccc
     2401 cgcggtggcg ctgcagcagc aacgcggctc cccgacgacg cgctcgtccg tcggcagcgt
     2461 caccacgctc tccaacctgc tgcgcatgct gtattcgcgg gccggcgagt atccgcccgg
     2521 gcaggagctg ctttatgccg aatccttctc gcccaacacg cccgaaggcg cctgtccgac
     2581 gtgccacggg ctcggccgcg tctacgaagc gaccgagcgc tcgatggtgc cggacgactc
     2641 gctcacgatc cgcgaacgcg cgatcgccgc ctggccgacg gcatggcatg gacagaatct
     2701 gcgcgatatc gcggtcacgc tcggctacga cgtggatcgg gcctggcggg atctgcccag
     2761 gaaggaccgc gactggctgc tcttcacgga cgagcagccg accgttccgg tctatgccgg
     2821 ctacacgccg gccgaagtgc ggcgcgcgct caagcgcaag gaggagccga gctatcaggg
     2881 aacgttcacc ggcgcccggc ggcatgtgct gagcaccttc gccaacagcg aaagcccgct
     2941 catgaaaaag cgggcggcgc gttacatgat cagtaccgac tgtccacttt gtcatggcaa
     3001 gcggctgcgc caggatgcgc tatcggtgaa gttcgaggga ctcgacatcg ccgacatgtc
     3061 cagcctgccg ctggggcggc tcgca
//
LOCUS       DATAIQ010000584         2006 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_307277, whole genome shotgun sequence.
ACCESSION   DATAIQ010000584 DATAIQ010000000
VERSION     DATAIQ010000584.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2006)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2006)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2006
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_307277"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2006
                     /locus_tag="VHN20_09675"
     CDS             <1..>2006
                     /locus_tag="VHN20_09675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012253994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX2726075.1"
                     /translation="REFAWYRVTVRPLPRPARGSAALWAVADVTHERERQENVFQELQ
                     HAIDYLDHAPAGFFSVDPAGPIIYMNATLASWLDYDLAQVGSGGLILSDIVPANVVAM
                     MTPLSGPSGSIRTETFDLDLRRRGGQSLPVRIYHRVSFGPDGQTGSSRSLVLNRSPGE
                     DVDEGQRAAEVRFARFFNNTPIAIATVDRRGSVVRHNASFVRLFGILRSGDAGGAESI
                     VSVVTENDRGGFEKALADASNGQGDVAPLDVSLTGEGSRSARVWVSPVSDADGEGESA
                     LVYALDTTEQRQLEQQFAQAQKMQAVGQLAGGVAHDFNNVLQAIIGYSDLLLANHRPT
                     DPAFQDIMQIKQNANRAASLVRQLLAFSRRQTLRPEVLSLSDALNDLTMLLKRLLGER
                     VDLDLRHGRDLWPVKADVNQLEQVVVNLAVNARDAMPEGGKLTIRTDNVTADEVRRLN
                     LTGMPPADSVLIEMSDTGTGIPPEVMDKIFEPFFTTKEVGKGTGLGLSTVFGIIKQSG
                     GFIYVDSVVGKGTAFRIYLPRHVLTAEEIAEEKAEPAAKPQAADLTGQGTILLVEDED
                     PVRAVNGRALTARGYTVLEAASGVEALQIIEESATPVDLVVSDVVMPEMDGPTLLREL
                     RTRYPDLKVIFVSGYAEDAFKKNLPEGEAFNFLAKPFSLKQLVET"
BASE COUNT          334 a          685 c          668 g          319 t
ORIGIN      
        1 cgcgagttcg cctggtaccg ggtgacggtg cggccgctgc cgcgccccgc gcgaggctcg
       61 gccgcgttgt gggccgtcgc cgacgtcacg cacgagcgcg agcggcagga aaacgtcttc
      121 caggagctgc agcacgcgat cgactatctc gaccatgcgc cggccggatt cttctcggtc
      181 gatcccgccg ggccgatcat ctacatgaac gcgaccctgg ccagctggct cgattatgat
      241 ctggcgcagg tcggctcggg cggactcatc ctctcggaca tcgttcccgc caacgtcgtc
      301 gccatgatga cgcccctgtc gggcccgtcg ggcagcatcc gcaccgagac gttcgacctc
      361 gacttgcgtc ggcgcggcgg ccagtccctt cccgtcagga tctatcaccg ggtttcgttc
      421 gggccggacg gccagaccgg atcatcgcgc agcctcgtcc tcaaccgctc gccgggggag
      481 gacgtcgacg agggtcagcg cgccgcggaa gtgcggttcg cgcgcttctt caacaacacg
      541 ccgatcgcca tcgccaccgt ggaccggcgc ggcagcgtcg tgcgccataa cgcctcgttc
      601 gtgcgactgt tcggcatcct ccggtctggc gacgccgggg gcgcggagtc gatcgtgagc
      661 gtcgtgaccg agaacgatcg cggcggcttc gaaaaagcgc tcgccgatgc gtcgaacggg
      721 cagggcgacg tggctcctct cgacgtcagc ctcacgggcg agggtagccg ctcggcgcgg
      781 gtgtgggtca gcccggtcag cgacgccgac ggcgagggcg agagcgcgct ggtctacgcg
      841 cttgacacga ccgagcagcg ccagctggag cagcaattcg cccaggcgca gaagatgcag
      901 gccgtcggac agctcgccgg cggcgttgcg cacgacttca acaacgtgct gcaggcgatc
      961 atcggctatt ccgatctgct cctggccaac caccggccga ccgatccggc gttccaggac
     1021 atcatgcaga tcaagcagaa tgccaaccgg gcggcgagcc tcgttcgcca gctgctggcg
     1081 ttctcgcgcc ggcagacgtt gcggccggag gtgctgagcc tcagcgacgc gctcaacgac
     1141 ctgaccatgc tgctcaagcg gcttctcggc gagcgcgtcg atctcgatct tcggcacggc
     1201 cgtgacctgt ggccggtcaa ggccgacgtg aaccagctcg agcaggtggt cgtgaatctt
     1261 gcggtcaacg cccgcgatgc tatgcccgaa ggcggcaagc tgacgatccg cacggacaac
     1321 gtgacggccg acgaggtgcg ccgtctgaac ctgaccggca tgccgccggc cgattccgtg
     1381 ctgatcgaga tgtcggatac cggcaccggc atcccgcccg aggtgatgga caagatcttc
     1441 gagccgttct tcaccaccaa ggaagtcggc aagggcaccg gcctcggctt gtcgaccgtg
     1501 ttcgggatca tcaagcagtc cggcggcttc atttatgtcg attcggtcgt cgggaagggc
     1561 accgcgttcc gcatctacct gccgcggcac gtgctcaccg ccgaagagat cgccgaggag
     1621 aaggccgagc cggccgccaa gccgcaggcg gccgatctca ccgggcaggg caccattctg
     1681 ctcgtcgagg acgaggatcc ggtgcgcgcc gtcaacggcc gcgcgctgac ggcccgcggc
     1741 tacaccgtgc tcgaggccgc ttccggcgtc gaggcgctgc aaatcatcga ggaaagcgcg
     1801 acgccggtgg acctcgtcgt atccgacgtc gtgatgccgg aaatggacgg gccgaccttg
     1861 ctgcgcgagc tgcgcacgcg ctacccggac ctgaaggtga tcttcgtctc cggctacgcc
     1921 gaggacgcct tcaagaagaa cctgcctgag ggcgaggcct tcaacttcct cgccaaacca
     1981 ttcagcctca agcagctggt cgagac
//
LOCUS       DATAIQ010000585         1782 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_445309, whole genome shotgun sequence.
ACCESSION   DATAIQ010000585 DATAIQ010000000
VERSION     DATAIQ010000585.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1782)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1782)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1782
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_445309"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..732)
                     /locus_tag="VHN20_09680"
     CDS             complement(<1..732)
                     /locus_tag="VHN20_09680"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein"
                     /protein_id="HEX2726076.1"
                     /translation="MLRRAVLCAAAFLGPAAGASAADLPNRYRGPDLFSPAPAATWTG
                     FYVGAQVGYGVGSDQTLINVAGFPFSFVGPDHDLSGPVGGLHAGYNFQRGPIVYGLEA
                     DLELANVDGAVSLAGSGGFAGLGLSSRTSIDWQGSLRGRVGFALFDRAMIYGTAGLAV
                     ASIENSYSATLPPGNVFGAPAGITGAKFDETRWGWTIGGGVEYALMSNWTARVEYRYA
                     NFSEYKNESPFLAAAGSTIRQDPDLH"
     gene            1069..>1782
                     /locus_tag="VHN20_09685"
     CDS             1069..>1782
                     /locus_tag="VHN20_09685"
                     /EC_number="4.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014765872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_function: GO:0016849 - phosphorus-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0032555 - purine ribonucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEX2726077.1"
                     /translation="MPFIKQKARGERRLAAILAADVVGYSRLMGQDERGTLSRFKSHR
                     VELIEPLTRKRRGRIVKTTGDGILIEFPSAVEAVECAVEVQRGMLKRNANVPPDRRIV
                     FRIGVHQGDVVFEDGDVFGDGVNIAARLETVAEPGGICVSGRVHEDLLGKLDLGFTDK
                     GEQQIKNISRPVRVYALGPAMLGDAAARSVHAGPAPARRHRDGRRIAAAAGVLAAAGI
                     GIGVLWLMPAPPPSQKPAAP"
BASE COUNT          300 a          598 c          607 g          277 t
ORIGIN      
        1 gtgcaggtca gggtcctgcc gaatcgtgct gccggcggcc gcaagaaacg gcgactcgtt
       61 cttgtactcg ctgaagttgg cgtagcgata ttcgacgcgc gccgtccagt tgctcatcag
      121 cgcgtattcg acgccgccgc cgatggtcca gccccagcgc gtctcgtcga acttggcgcc
      181 cgtgatgcca gccggcgcac cgaacacgtt gcccggcggc aaggtcgcgc tgtacgagtt
      241 ctcgatgctc gcgacggcga ggccggcggt gccgtagatc atggcccggt cgaacagggc
      301 gaaacccacg cgcccgcgca gcgagccctg ccaatcgatg ctcgtgcgcg acgacagccc
      361 gaggccggcg aagccgccgc tgccggcgag cgagacggcg ccgtcgacgt tggcgagctc
      421 gagatccgcc tccaggccgt agacgatcgg gccccgctgg aaattgtagc cggcatgcag
      481 gccgccgacc ggcccgctca gatcgtggtc gggcccgacg aagctgaacg ggaagccggc
      541 gacgttgatc agggtctgat cgctgccgac gccgtaacca acctgggcgc cgacgtaaaa
      601 acccgtccag gtcgcggccg gagcgggcga gaacaggtcg gggccgcgat atcgattggg
      661 cagatccgcc gcagaagcac ccgcagccgg cccaaggaat gcggccgcac acaacacagc
      721 tcttctgagc atttacacct cgcttagact tgtcgccttt tccttaacct cccgtttgca
      781 aacgaatcgt tggcatggat ggttgacgaa atgtaaatga ttacgcgtca cgaccagata
      841 aatgctggcg gcgggacgtt tcgagcgccc ttgcccgtcg cgccgaagag tggtgtgtga
      901 tcgccggccc ggccctggat ccgactccgc cgccggcgca cgacgtccag agcgggatcg
      961 cttcagattg aatcgatgac gctctgcatc tttctgagcc gcatgatctt ttcggcgaag
     1021 cggtgaccac ttcgccggat catgctctag cgaggttgcg ggaagcgaat gccgttcatc
     1081 aagcagaagg cgcggggcga gcggcggctc gcggcgatcc ttgccgcgga cgtggtcggc
     1141 tactcgcggc tgatgggcca ggacgagcgc gggacgctgt cgcgcttcaa atcgcaccgc
     1201 gtcgagctga tcgagccgct cacgcgcaaa cgccgcggcc gcatcgtcaa gacgaccggc
     1261 gacggcatcc tgatcgagtt tccgagcgcc gtcgaggcgg tggaatgcgc cgtcgaggtg
     1321 cagcgcggca tgctgaagcg caatgccaac gtcccgcccg acaggcgcat cgtgttccgc
     1381 atcggcgtgc accagggcga cgtcgtgttc gaggacggcg acgtcttcgg cgacggcgtc
     1441 aacatcgccg cacggctcga gaccgtggcc gagcccggcg gcatctgcgt ctcgggtcgg
     1501 gtccacgagg accttttggg caagctcgac ctcggcttca ccgacaaggg cgagcagcag
     1561 atcaagaaca tctcgcggcc ggtgcgcgtc tacgcgcttg gcccggcgat gctcggcgac
     1621 gccgcggcgc ggtccgttca tgcaggcccg gcgccggccc ggcgccacag ggacggccgc
     1681 cgcatcgcgg cggcggccgg cgttctcgcc gcagccggca tcggcatcgg ggtcctgtgg
     1741 ctgatgcccg ctccgccacc atcacagaag ccggcggcgc cg
//
LOCUS       DATAIQ010000586         1652 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_445514, whole genome shotgun sequence.
ACCESSION   DATAIQ010000586 DATAIQ010000000
VERSION     DATAIQ010000586.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1652)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1652)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1652
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_445514"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            88..705
                     /locus_tag="VHN20_09690"
     CDS             88..705
                     /locus_tag="VHN20_09690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018259535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEX2726078.1"
                     /translation="MPKLTLYHAAPSRSAMAHWLLEEIGELYEVHLLHLRRGENREPA
                     YLAVNPMGKVPALRHGDVVVTESAAICLYLADAFPEAGVTVPVGDPRRGVFLKWLFFG
                     PGVLEPAVTDQAFKRAEPPPRGTLGYGDFDTTLDVLAKALAPGPYLLGGQFTAADVVI
                     GGTLRWGMLFELIPKRPEFVAYVDRLAARPALQRAEARDKEMAAA"
     gene            complement(740..>1652)
                     /locus_tag="VHN20_09695"
     CDS             complement(740..>1652)
                     /locus_tag="VHN20_09695"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEX2726079.1"
                     /translation="VGVAVGSGYDINARTLARYLGAHIPGKPTIIVQNQPGAGSVTMT
                     NTLYNSGPFDGTVIGASFNGMPTLPLLQPQGVRFDPNKLNWIGSTNRETHVTYVWHTA
                     AVQRLEDLASKELVVGAQAPGTTQYDFPALGNEMFGYKFKVVKGYDGTPKIHLAMESG
                     EVQGVGATSWTTLKAINSNWLQEKKIKVIAQWGLRKHPDLPDVPSVLDLAKTDTDRQA
                     LLLGLARLEFGRPFFVPPGVPAERVEALRRAFDATMKDPAFLAEADKLKLDIDPLTGE
                     QVAELVAQVSKTPADIAARVRTALEPK"
BASE COUNT          238 a          550 c          574 g          290 t
ORIGIN      
        1 gtagaagaac gttaaccatc acgctcacag cgcatggtcc gatccgccgg cggcggtggc
       61 ggcgagggcc ggaatcggga ggaaacgatg ccaaagctca cgctctatca cgccgcccca
      121 tcgcgttccg ccatggccca ctggctgctc gaggagatcg gcgagctcta tgaggtgcac
      181 cttctccacc tcaggcgggg cgaaaaccgg gagccggctt atctggccgt taaccccatg
      241 ggcaaagtgc cggccctccg gcacggcgat gtcgtcgtca ccgaatcggc cgccatctgc
      301 ctgtacctgg cggacgcctt tccggaagct ggcgtgacgg tcccggtcgg ggatccgcgc
      361 cgcggcgtgt ttctcaagtg gctgttcttc gggcccggcg tgctcgagcc cgccgtcacc
      421 gaccaggcct ttaagcgcgc cgagccgccg ccgcgcggca cccttggcta cggcgacttc
      481 gacaccacgc tggacgtgct cgctaaggcg ctcgcgcctg gaccctatct gctcggcggg
      541 cagttcacgg cggccgacgt ggtgatcggc gggacgttgc gctggggcat gctgttcgag
      601 ctgatcccca agcggccgga attcgtggct tatgtcgacc ggctcgccgc tcgcccggcc
      661 ctgcagcggg ccgaggccag ggacaaggag atggcggccg cctgagcgac ggtcgggcag
      721 ctgccggcgc tgctcccggc tatttcggct cgagcgccgt cctgacgcgc gcggcgatgt
      781 cggccggggt cttggagacc tgtgcgacga gttcggcgac ctgctcgccc gtgagcggat
      841 cgatgtcgag cttgagcttg tcggcttctg ccaggaaagc cgggtccttc atggtcgcgt
      901 cgaacgcccg ccgcagcgcc tcgacccgtt ccgccggcac gccggggggc acaaagaagg
      961 gccgtccgaa ctcgagccgc gccaggccga gcagcagcgc ctgacgatcg gtgtcggtct
     1021 tggccaggtc gagcacgctc ggcacgtcgg gcaggtcggg atgcttgcgc aggccccatt
     1081 gcgcgatgac cttgatcttc ttctcctgga gccaattgga gttgatcgcc ttgagcgtcg
     1141 tccacgaggt cgcgccgacg ccctgcacct cgccggactc catcgcaagg tggatcttgg
     1201 gcgtgccgtc ataacctttg acgaccttga acttgtagcc gaacatctcg ttgccgaggg
     1261 cggggaagtc gtattgcgtc gtcccgggcg cctgcgcccc gaccaccagc tccttgctgg
     1321 cgaggtcctc gaggcgctgc acggccgccg tatgccagac ataggtgacg tgggtctcgc
     1381 ggttcgtgct gccgatccag ttgagcttgt tggggtcgaa gcgcacgccc tgcggctgca
     1441 gcagcggcag cgtcggcatg ccgttgaacg aggcgccgat cacggtgccg tcgaacggcc
     1501 ccgaattgta cagcgtgttg gtcatggtga cgctgccggc gccgggctgg ttctgcacga
     1561 tgatggtggg cttgcccggg atatgcgcgc cgagatagcg ggcgagcgtg cgcgcgttga
     1621 tgtcgtagcc ggaccccacc gcgacgccga cc
//
LOCUS       DATAIQ010000587         1938 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_123354, whole genome shotgun sequence.
ACCESSION   DATAIQ010000587 DATAIQ010000000
VERSION     DATAIQ010000587.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1938)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1938)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1938
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_123354"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..730
                     /locus_tag="VHN20_09700"
     CDS             <1..730
                     /locus_tag="VHN20_09700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726080.1"
                     /translation="MSIMNMPPLTYLKRVPGLNTDALKGAYTDPSVWQSFDPAYMTLC
                     SPDPQAFRPPDEPVNVLQVTLPTNFKVARFDSDAHTQMLRDMQDGIEAIRHDVGGDKV
                     ELPVKLKVHDSVFVPLAKWAMLLTGNYRCVTKDGPRSIKEAVHTDPAQSRAVYDWVRE
                     LCISLGAAPDDLVPFEKYAAAAQGLSRPSSAARALFAGAPNIERVDRLVQAIAAQKGL
                     RNPVVDETVALVDAQLEKNRKAAA"
     gene            991..1935
                     /locus_tag="VHN20_09705"
     CDS             991..1935
                     /locus_tag="VHN20_09705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX2726081.1"
                     /translation="MAGPKLKTVTRTQGNNQALKNGTVRPRNFEFDFEEVDPLIAAFR
                     RMVRGSEFDICEMAITTYVCAREHGKRMTAVPVFLVRAFHHGAILVNTKAGIRSPKDL
                     EGKKVGVNRGYTVTTGVWARAVLQEEHGVDLGKVTWMLSGDEHVAEYKPPSNVVPIEA
                     GKKMADMLISGELAAAIGVEVEHPNVKPLIPDATDTGLKALRERGHYPINHLVVIKDE
                     LLEKNPDLAADVFNAFAESKRLYVERLEAGQIDKPTGVDKVHQRVMEIIGDPLPYGIE
                     PNRKVLEQLIQHALTQRIITRSVAVDDLFAPATRKLVG"
BASE COUNT          359 a          668 c          635 g          276 t
ORIGIN      
        1 catgtcgatc atgaacatgc cgccgctgac gtacctcaag cgcgtcccgg gcctcaatac
       61 cgacgcgctc aagggcgcct acaccgatcc gagcgtgtgg cagagcttcg acccggccta
      121 catgaccctg tgcagccccg acccgcaggc cttccggccg cccgacgagc cggtcaacgt
      181 gctgcaggtg accctgccca ccaacttcaa ggtggcgcgc ttcgattccg acgcgcacac
      241 gcagatgctg cgcgacatgc aggacggcat cgaggcgatc cgccacgacg tcggtgggga
      301 caaggtcgag ctgccggtga agctcaaggt gcacgacagc gtattcgtgc cgctcgccaa
      361 atgggccatg ctgctcaccg gcaactaccg ctgcgtgacc aaggatgggc cgcgctcgat
      421 caaggaggcc gtgcacacgg acccggcgca atcccgtgcg gtttacgact gggtgcgcga
      481 gctctgcatc tcgctcggcg ccgcgccgga cgatctcgtg ccgttcgaga aatacgccgc
      541 cgccgcgcag gggctgtcgc gcccgtcctc ggcggcgcgc gccctgttcg cgggggcgcc
      601 caacatcgag cgcgtcgacc ggctggtgca ggccatcgct gcccagaagg gcttgcgcaa
      661 tcccgtcgtc gacgagaccg tggcgctcgt ggacgcgcag ctggagaaga accgcaaggc
      721 ggccgcctga ccgcgccgca caaccatttt ccctgtcatg gccgggcttg gcccggccat
      781 cccgatcgga agggcgagtg cgtttcacat cgggatcacc ggcacaaggc cggtgagaca
      841 aagcgggcag gggccggggg taccggcgtc ctaactcagg atggtccgcg cgggccccgg
      901 cggcctgcgc tcgacgcgcc ggagcgtttc cggcatagag cgggcgctca ttgtcccatc
      961 ccccgaaagg caccggagaa aagcgccgcc atggccggac ccaagctcaa gaccgtcacg
     1021 cgcacgcaag gcaacaacca agccctcaag aacgggaccg tcaggccaag aaacttcgag
     1081 ttcgatttcg aggaggtcga cccgctgatc gccgccttcc ggcgcatggt gcggggctcc
     1141 gagttcgaca tctgcgagat ggcgatcacg acctatgtgt gcgcgcgcga gcacggcaag
     1201 cgcatgaccg cggtcccggt gttcctggtg cgcgcgttcc atcacggcgc catcctggtc
     1261 aacaccaagg cgggcatccg ctcgccgaag gatcttgagg gcaagaaggt cggcgtcaac
     1321 cgcggctaca cggtgacgac cggcgtgtgg gcgcgcgcgg tgctgcagga ggagcacggc
     1381 gtcgacctcg gcaaggtcac ctggatgctg tccggagacg agcacgtcgc cgaatacaag
     1441 ccgccgtcca acgtggtgcc gatcgaggcg gggaagaaga tggcggacat gctgatctcg
     1501 ggcgagctcg ccgccgcgat cggcgtcgag gtcgagcatc caaacgtcaa gccgctgatc
     1561 ccggatgcga ccgacaccgg cctcaaggcc ctgcgcgagc gtggccacta cccgatcaac
     1621 cacctcgtcg tcatcaagga cgagctgctc gaaaagaatc ccgacctggc cgccgacgtg
     1681 ttcaacgcct tcgccgagtc caaacgcctc tatgtcgaac ggctcgaggc cgggcagatc
     1741 gacaagccga cgggcgtcga caaggtccac cagcgcgtca tggagatcat cggcgacccg
     1801 cttccctacg gcatcgagcc gaaccgcaag gttctggagc agctgatcca gcatgcgctg
     1861 acgcaacgca tcatcacgcg ctccgtcgcc gtcgacgacc tgttcgcgcc ggcgacccgc
     1921 aagctcgtgg ggtgagcg
//
LOCUS       DATAIQ010000588         3752 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_152722, whole genome shotgun sequence.
ACCESSION   DATAIQ010000588 DATAIQ010000000
VERSION     DATAIQ010000588.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3752)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3752)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3752
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_152722"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..345)
                     /locus_tag="VHN20_09710"
     CDS             complement(<1..345)
                     /locus_tag="VHN20_09710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019904346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp33 family molecular chaperone HslO"
                     /protein_id="HEX2726082.1"
                     /translation="MTAADVDGTDDLVLPFAVDALDARGRVVRLGPAVDTILGRHDYP
                     DAVARLVGEAAALTVLLGSSLKFSGSFQLQTKSDGPLEMLIVDFDAPDRIRACARFDR
                     ERLAALGAAPRSA"
     gene            complement(342..1274)
                     /gene="argF"
                     /locus_tag="VHN20_09715"
     CDS             complement(342..1274)
                     /gene="argF"
                     /locus_tag="VHN20_09715"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019403752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004585 - ornithine carbamoyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HEX2726083.1"
                     /translation="MTDVTRHFLDLRDFSGAELRRVLDASAALKARRRKGEPPRERPL
                     DGKILAMVFDKPSTRTRVSFDVAMRELGGQAIMLTGQEMQLGRGETIGDTARVLSRYV
                     DAIMIRILDHDMMLELAEHATVPVINGLTKLSHPCQIMADVLTFEENRGPIRGRTIAW
                     SGDSNNVLASWIQAAARLEFRLNIATPPELPPRPELLTWARREGAQIMLSRDPFEAAA
                     GADAVVTDCWVSMGDEDEGRRHNLLKPYQVNASLMAAAKADAIFMHCLPAHRGEEVTD
                     EVIDGPNSVVFDEAENRLHAQKGILAWCLGAVQP"
     gene            complement(1271..2479)
                     /locus_tag="VHN20_09720"
     CDS             complement(1271..2479)
                     /locus_tag="VHN20_09720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HEX2726084.1"
                     /translation="MNSPLLPIYARADVAFERGEGVWLVTQEGERYLDFGAGVAVNAL
                     GHAHPHLVEALTEQARRVWHTSNLYRIPGGERLAQRLIDNTFAEKVFFCNSGAEALEA
                     SIKMARRYHYGKGRPERFRIVTFEGAFHGRTLATIAAGGQPKYLEGFGPKVDGFDQVP
                     FDDDKALRAALGPETAGILIEPIQGEGGVRVVGNQRLRALRQLCDDHGLLLILDEVQT
                     GVGRTGKLFAHEWSGIAPDIMAIAKGIGGGFPMGACLATAEAASGMTVGVHGTTFGGN
                     PLAMAVGNAVLDVVLEPGFLEHVERVSLLLKQRLAELKDRHPAVIADIRGQGLLLGLR
                     LNVPPADFVNAALAQKLLTIGAGDNVVRLLPPLIASDAEIGEAVARLDRACADIENEM
                     RAIAQRGAAE"
     gene            2877..3380
                     /locus_tag="VHN20_09725"
     CDS             2877..3380
                     /locus_tag="VHN20_09725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012336311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GcrA family cell cycle regulator"
                     /protein_id="HEX2726085.1"
                     /translation="MTDAGGTWTDDRVELLKKLWSEGLSASQIAAEMGGVTRNAVIGK
                     VHRLGLSGRGKASTPGVPRPRKPRVAAPPTATRVNVALAPRAAQPRPVAVAVPELLEE
                     EVVVPLSERVTIMELRESMCRWPLGDPTTPEFRFCGARSITGLPYCTYHARVAYQPAA
                     ERKRIRA"
     gene            complement(3495..>3752)
                     /locus_tag="VHN20_09730"
     CDS             complement(3495..>3752)
                     /locus_tag="VHN20_09730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018648149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX2726086.1"
                     /translation="VLPQLLVQATLTIATAIIAEASLSFLGLGQQPPAPSWGSMLNAA
                     QRFLINAPWMAVWPGLAIFVTVLSFNLLGDGLRDALDPRSK"
BASE COUNT          652 a         1218 c         1293 g          589 t
ORIGIN      
        1 ggcagagcgc ggcgcggcgc cgagcgcggc gaggcgctcg cggtcgaagc gcgcgcaggc
       61 gcgaatgcgg tccggcgcgt cgaaatcgac gatcagcatc tcgagggggc cgtcggattt
      121 cgtctgcagc tggaagctgc ccgagaattt cagcgaggaa ccgagcagaa ccgtcaaggc
      181 tgccgcctcg ccgaccaggc gggcgaccgc gtccgggtag tcgtgccgtc cgaggatggt
      241 atcgacggcg ggcccgagcc ggaccacccg gccgcgggca tcgagggcat cgaccgcgaa
      301 gggcaggacc agatcgtccg tcccatcgac gtcggcagcc gtcatggttg gacggctccc
      361 agacaccacg ccaaaatgcc tttctgggcg tggagacggt tctcggcttc gtcgaagacc
      421 acggaattgg ggccgtcgat cacctcgtcg gtgacctctt cgccgcgatg cgccggcagg
      481 caatgcatga agatcgcatc ggccttggct gcggccatca ggctcgcatt gacctggtaa
      541 ggtttcagaa gattgtggcg gcggccctcg tcctcgtcgc ccatcgacac ccagcaatcg
      601 gtcacgaccg cgtcggcgcc ggcggcggct tcgaacggat ctcgcgacag catgatctgg
      661 gccccctctc gccttgccca tgtcaaaagc tcgggacggg gcgggagttc cgggggtgtg
      721 gcgatattga gcctgaactc gaggcgggcc gctgcctgga tccaggacgc gagaacattg
      781 ttggagtcgc ccgaccaggc gatcgtgcgc ccgcggatcg gcccacgatt ttcctcgaag
      841 gtcaggacgt cggccatgat ctggcacggg tgcgacagtt tggtcaggcc gttgatcacc
      901 ggcacagtgg cgtgctcggc aagctcgagc atcatgtcgt ggtcgagaat gcggatcatg
      961 atcgcgtcga cgtagcgcga cagcacgcgc gccgtgtcgc cgatggtctc gccgcggccg
     1021 agctgcatct cctgaccggt gagcatgatc gcctggccgc cgagctcgcg catcgcgacg
     1081 tcgaacgaca cgcgcgtgcg cgtcgacggc ttgtcgaaca ccatggccag gatcttgccg
     1141 tcgagcgggc gttcacgcgg cggctcgccc ttgcggcggc gcgccttcaa ggccgcgctt
     1201 gcgtcgagca cgcgccgcag ctcggcgccg gaaaagtccc gcaggtcgag aaaatggcgg
     1261 gtcacgtcgg tcattccgcg gctccacgct gagcgatggc ccgcatctcg ttctcgatat
     1321 ccgcgcaggc gcgatcaaga cgcgccacgg cctcgccgat ctccgcgtcg ctggcaatga
     1381 gtggcggcag aagacggacg acgttgtctc cggccccgat ggtcaggagc ttctgcgcga
     1441 gggccgcgtt gacgaagtcg gcaggcggaa cgttgaggcg caggccgagc agcaggccct
     1501 ggccgcggat gtcggcgatg acggccgggt gccggtcctt cagctccgca agcctttgct
     1561 tgagcaacag cgacacgcgc tcgacatgct cgagaaagcc cggttccaga accacgtcga
     1621 ggacggcgtt gccgacggcc atggcgagcg ggttgccgcc gaaggtcgtg ccgtggacgc
     1681 cgacggtcat gccactcgcc gcctcggcgg tggcgaggca ggcgcccatc gggaagccgc
     1741 cgccgatgcc cttggcgatg gccatgatgt ccggggcgat gccgctccat tcgtgggcga
     1801 agagcttgcc ggtgcgcccg actcctgtct gaacctcatc gaggatcaga agcagcccgt
     1861 gatcgtcgca cagctgccgc agggcccgaa ggcgctggtt gccgacgacg cggacgccgc
     1921 cctcgccctg gatcggctcg atcaggatgc cggcggtctc gggaccgagg gccgcccgca
     1981 acgccttgtc gtcatcgaac gggacctggt cgaagccgtc gaccttgggg ccgaaaccct
     2041 ccagatattt cggctggccg cccgccgcga tggtggcaag cgtgcggccg tggaaggcgc
     2101 cttcgaaggt gacgatgcgg aagcgctccg gccggccttt gccataatga tagcgccggg
     2161 ccatcttgat ggatgcttcc agcgcctcgg ctcccgaatt gcagaaaaac accttctccg
     2221 cgaaggtgtt gtcgatcagc cgctgggcca ggcgctcgcc gccggggata cggtaaaggt
     2281 tcgaagtgtg ccagacccgg cgggcctgct cggtcaatgc ctcgaccagg tgcgggtggg
     2341 catggccgag ggcgttgacg gccacccccg ctccgaagtc gaggtagcgc tcgccctctt
     2401 gcgtcacaag ccagacgccc tcgcctcttt cgaaggcgac gtcggcacgc gcataaatgg
     2461 gcagcaacgg cgagttcacg gcaggtctcc acggccaacg ggcgcgcccg ggccgaaaaa
     2521 tgaaagcgcc gcccggacga gggcggcacc gggtcaagat tctattcgag tgtaggcccc
     2581 tgtcaattca ggataattgc aactccgcgc ggcggagaag cttggcttgc cgggacatct
     2641 cctggggaca acgatcaaga tcaaatgggg aaaacattcg agattaaacg ccgactcttg
     2701 cgcgcgagtc ccagcattag taggttcccc ctcgtcgaac accccattcg tggcggcgac
     2761 ctcaccaaaa ggagcgtttt tcagtaacgc ggtcggagta cccctctggt cgcgcggctg
     2821 caaggattcc tgaaggcgag gttcacggat gtggtgcttc aacgaggagg cacaacatga
     2881 cagatgcggg cggaacctgg acggatgacc gggtcgaatt actgaaaaaa ctctggagcg
     2941 aaggcttgag cgcaagccag atcgctgcgg aaatgggcgg cgtcaccagg aacgccgtga
     3001 tcggcaaggt gcatcgcctg ggattgtccg gccgcggcaa ggcgagcacg ccgggggtcc
     3061 cgcggccgcg aaagccgcgc gtcgcagccc ctccgaccgc gacccgcgtc aacgtggccc
     3121 tggcgccgcg ggcggcgcag ccccggccgg tggccgtggc cgtcccggaa ctgctcgagg
     3181 aagaggtcgt cgtgccgctg tccgagcgcg tcaccatcat ggagttgcgg gaatccatgt
     3241 gccgctggcc gctcggcgat ccgaccacgc cggaattccg cttctgcggc gccagatcga
     3301 tcaccggcct gccgtattgc acctaccacg cgcgcgtcgc ctaccagccg gccgccgagc
     3361 gcaagcgcat ccgcgcgtaa cgcggtactg agtttcaccg tcatggccgg gcttgtcccg
     3421 gccatttgct ttggctgact gaactcagga ttacacgcac atcgtgggcg acgaggggag
     3481 gtacgccgtt cgcctcattt ggaacgcggg tcaagggcgt cgcgcaagcc gtcgccgagc
     3541 aggttgaaag acagcacggt cacgaagatc gcaaggcccg gccacaccgc catccacggc
     3601 gcgttgatca gaaagcgctg ggccgcgttc agcatcgacc cccatgacgg cgccggcggc
     3661 tgctggccga ggcccaggaa cgacaggctc gcctcggcga tgatcgcggt ggcgatggtg
     3721 agcgtcgcct ggacgaggag ctgcggcagc ac
//
LOCUS       DATAIQ010000589         1958 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_123542, whole genome shotgun sequence.
ACCESSION   DATAIQ010000589 DATAIQ010000000
VERSION     DATAIQ010000589.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1958)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1958)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1958
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_123542"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..991
                     /locus_tag="VHN20_09735"
     CDS             <1..991
                     /locus_tag="VHN20_09735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012045901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0017013 - protein flavinylation [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
                     /protein_id="HEX2726087.1"
                     /translation="GAVSRRRFIGITAAAAGLSLLPATGTVRADAHVVTWRGTAMGAV
                     ATLRIHHHDRAAAERLVARALAEVRRLEQVFSLYRDDSAIVVLNRHGVLAAPPAELVQ
                     LLAECRRYWELTDGLFDPTVQALWTLYRDHFSKPAANAAGPPRETLEAALDKVGFPYL
                     AADANRIVLRRRGMGLTLNGIAQGYVTDRVVDMLRAENIDHSLVDMGESRALGARPDL
                     HPWTVAVADPDGAGDAAETLQIVDQAVATSAPSGFRFDPAGRCNHLFDPRSGLSASLY
                     RSVTVVAPTATAADALSTACSLMPVDRIESVMRAGGGGRVLLIGADGTRLVRV"
     gene            1099..1275
                     /locus_tag="VHN20_09740"
     CDS             1099..1275
                     /locus_tag="VHN20_09740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726088.1"
                     /translation="MTTQVIANDRGHHHPGVLSRILDVLSRLEETLELARELRRRGPE
                     GARHLLEQRGLIGR"
     gene            1321..1746
                     /locus_tag="VHN20_09745"
     CDS             1321..1746
                     /locus_tag="VHN20_09745"
                     /inference="COORDINATES: protein motif:HMM:NF040427.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6455 family protein"
                     /protein_id="HEX2726089.1"
                     /translation="MSSARAITTASSFLSRVLSTVAGLRDNLQLAFEIGRSDPETARR
                     ILEERGLIDGPHWQVPARAWSAVRILYRMMRSLGLDPAQVAAAEPQVMRTMQRACIAC
                     GARPRCEQALERCASRSTYQEFCANAARLDALRARGLAA"
     gene            1765..>1958
                     /locus_tag="VHN20_09750"
     CDS             1765..>1958
                     /locus_tag="VHN20_09750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012111443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster binding
                     domain-containing protein"
                     /protein_id="HEX2726090.1"
                     /translation="MGCAIVVDPQGRRHVLEGAEGWRLMEIIRDWGLPIGCECGGAAS
                     CGMCNVEVASSWRERLPPRS"
BASE COUNT          312 a          655 c          664 g          327 t
ORIGIN      
        1 cggtgccgtt tcgcggcggc gcttcatcgg catcacggcg gccgcggccg ggctgagcct
       61 gcttccggcg accggcacag ttagggccga cgcacacgtc gtgacgtggc gcggcacagc
      121 catgggtgcg gtcgccacgc tccgaattca tcatcatgat cgcgccgctg ccgagcgcct
      181 cgtcgcccgg gcgctcgccg aagtgcggcg gctcgaacag gtgttcagcc tctaccgcga
      241 cgactcggcc attgtggtgc tgaaccgcca cggcgtgctc gcggcgccgc cggcggaact
      301 cgtgcagctg ctcgccgaat gccgccgcta ctgggagctg acggacggct tgttcgatcc
      361 caccgtgcag gcgctgtgga cgctttatcg cgatcatttc tcaaagcccg cagcgaacgc
      421 tgccggcccg ccgcgcgaaa cgctcgaagc agccctcgac aaagtcgggt tcccgtatct
      481 tgctgccgac gcgaaccgca tcgtcctgcg gcggcgcggc atgggcctga ccttgaacgg
      541 catcgcgcaa ggctacgtga cagaccgcgt cgtcgatatg ctgcgcgccg agaacatcga
      601 tcacagcctg gtcgatatgg gcgagagccg cgcgctcggt gcacgcccgg acctgcatcc
      661 ctggaccgtt gcagtcgccg atcccgatgg cgccggcgac gcggcagaaa cgttgcagat
      721 cgtggaccag gcggtcgcca cctccgcccc gagcgggttc cgcttcgacc cggccggccg
      781 ctgcaatcac ctattcgacc cccgatcggg cctttcggcc agcctttacc ggagcgtcac
      841 ggtcgtcgcg cccacggcca ccgcggccga cgcgctttcg accgcctgca gcctgatgcc
      901 tgtggacagg atcgaatccg tcatgcgggc gggggggggc ggccgggtcc ttctgatcgg
      961 ggctgacggg acgcggctcg ttagggtctg attaactatc cgggaatccg acggcttgat
     1021 ctgcaggatg tttgcggcac gtcaaagtaa gattagtggt cagctgccat agtgcttctc
     1081 acacggatgg agaagactat gacaacgcaa gtaatcgcta atgaccgcgg ccatcatcat
     1141 cccggtgttc tgagccgcat cctcgacgtg ctctcgcgac tcgaggagac cctcgagctg
     1201 gcgcgggagc tgaggagacg cggtccggaa ggcgcccgcc acctcctcga gcaacggggt
     1261 ctcatcggcc ggtgagaccg tctgacggga atcggtaggg ccagaaggat ggaggggcca
     1321 atgtcgagcg ctcgggcaat caccaccgcg tccagctttc tcagtcgcgt gctgtcgacc
     1381 gtagcggggc ttcgcgacaa cctgcagctc gcattcgaga tcgggcgatc cgatccggaa
     1441 acggcccgcc gcatcctcga ggagcgcggc cttatcgatg gtccgcactg gcaggttccg
     1501 gcccgcgcat ggtcggcggt gcgcatccta taccgaatga tgcgcagcct cgggctcgat
     1561 ccggcccagg tcgcggccgc cgaaccgcag gtgatgcgca cgatgcaacg tgcgtgcata
     1621 gcctgcggcg cacgcccgcg ctgcgagcag gctctcgagc gctgcgcgtc gcgcagcacc
     1681 tatcaggaat tttgcgcgaa cgcggcacgg ctcgacgctc tgcgcgccag gggccttgct
     1741 gcctgacagc cgggttgtcg gatcatgggt tgtgcgatcg tcgtcgatcc gcagggccgc
     1801 cgccacgtgc tcgaaggagc cgaaggctgg cggctcatgg aaatcatacg ggactgggga
     1861 ttgccgatag gatgcgagtg cggcggcgca gcatcctgcg gcatgtgcaa cgtggaggtc
     1921 gcgtcctcgt ggcgcgagcg cctgccgccc cgctcgga
//
LOCUS       DATAIQ010000590         4128 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_60052, whole genome shotgun sequence.
ACCESSION   DATAIQ010000590 DATAIQ010000000
VERSION     DATAIQ010000590.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4128)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4128)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4128
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_60052"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..511)
                     /locus_tag="VHN20_09755"
     CDS             complement(<1..511)
                     /locus_tag="VHN20_09755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003599951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HEX2726091.1"
                     /translation="MPVAPGGPRVLLRRLREIMAEPVSPQARLDRIVVLIAANMVAEV
                     CSVYVLRADAALELYATEGLNREAVHLTTLPAGTGLVGLIARTAEPLALADAQTHPAF
                     SYRPETGEEIYHGFLGVPILRGGNTLGVLVVQNRAHRAYTEEEVEALQTTAMVVAEMI
                     ASGELQAIAA"
     gene            complement(697..1935)
                     /locus_tag="VHN20_09760"
     CDS             complement(697..1935)
                     /locus_tag="VHN20_09760"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020177124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004072 - aspartate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HEX2726092.1"
                     /translation="MPRLVMKFGGTSVATVERIRNVALHVKREVEAGYDVAVVVSAMA
                     GKTNELVGWCREASRLHDPREYDVVVASGEQVTSGLLAIVLQDLGLSARSWQGWQVPI
                     LTSDAHGSARIAGIDAAGILKGFADGRTVAVVSGFQGIHQESGRVTTLGRGGSDTSAV
                     ALAAALKAERCDIYTDVDGVYTSDPRIVTKAHRLDRISFEEMLEMASLGAKVLQVRSV
                     ELAMMHGVPTYVRSSFDDPADPKQGTLICEEEDIVEQQVVTGIAYSKDEAQITLRRVA
                     DKPGVAAAIFGPLADANINVDMIIQVVSSDAVTTDITFTVPTADYERAKDLLETNRER
                     IGYAELHGATDVVKISAIGVDMRSHAGVAAKAFKALSEKGINIRAITTSEIKFSVLID
                     AAYTELAVHTLHSLYGLDKM"
     gene            2144..2938
                     /gene="ubiG"
                     /locus_tag="VHN20_09765"
     CDS             2144..2938
                     /gene="ubiG"
                     /locus_tag="VHN20_09765"
                     /EC_number="2.1.1.222"
                     /EC_number="2.1.1.64"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012334461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008689 - 3-demethylubiquinone-9
                     3-O-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 2-polyprenyl-6-hydroxyphenol
                     methylase/3-demethylubiquinol 3-O-methyltransferase UbiG"
                     /protein_id="HEX2726093.1"
                     /translation="MTRPGPSSTVDPSEVARFDRLARDWWDPNGPMRALHRLNPVRLQ
                     YIRDRACNQFGRDERAPHCLHDLTVLDVGCGAGLLCEPLARLGASVTGLDPAATNIAV
                     ARLHAEGAGLAIDYRGDTVEAVVAQEERFDVVLAMEVVEHVADVNAFVSACCAAVKPG
                     GLLVMATINRTLRAFALAIVGAEYILGWLPKGTHQWDKFVTPAELADAIEAAGLAVIN
                     RRGAVYNPLTAQWLLAGDMSVNYMLAAERAPGVAPYSSGEPVKRAP"
     gene            2935..3357
                     /gene="arfB"
                     /locus_tag="VHN20_09770"
     CDS             2935..3357
                     /gene="arfB"
                     /locus_tag="VHN20_09770"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003747 - translation release factor
                     activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alternative ribosome rescue aminoacyl-tRNA
                     hydrolase ArfB"
                     /protein_id="HEX2726094.1"
                     /translation="MIAVTDAIAIDEREISESFVRASGPGGQNVNKVASAVQLRFDVR
                     RSSSLPNDVAIRLMKLAGSRLTQDGVLVITAQRFRSQERNREDALERLLDLVRIAAVA
                     PVKRRKTKPTKASKQRRLESKSRRSRIKTLRGAKPRVE"
     gene            complement(3320..3862)
                     /locus_tag="VHN20_09775"
     CDS             complement(3320..3862)
                     /locus_tag="VHN20_09775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003575460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase family protein"
                     /protein_id="HEX2726095.1"
                     /translation="MTIYFISDTHFGDAPRLRIDRRPFSSAAEMDQVMVERWNEVVGA
                     DDDIWHLGDFAFGPPRKRIAELLASLNGRKHLLVGNNDEAPTLEQPHWQSVQHYAEIV
                     VDGRRLVLCHYPFRTWHDMGKGVINLHGHSHGRLKPAPRQYDVGVDVWDFRPVALATI
                     LGRRQRSVVTPRAASRPAKS"
BASE COUNT          678 a         1366 c         1431 g          653 t
ORIGIN      
        1 gagccgcgat cgcctgcagc tcgcccgagg cgatcatctc ggccacgacc atggccgtcg
       61 tctgaagcgc ctcgacctcc tcctccgtgt aggcacggtg ggcgcggttc tggacgacga
      121 gcacgccgag cgtgttgccg ccgcgcagaa tcggcacgcc gaggaagccg tgatagatct
      181 cttccccggt ctccggccgg taggagaagg ctgggtgggt ctgcgcgtcg gcgagcgcca
      241 ggggctcggc cgtccgggca atgaggccga cgaggccggt gccggccggc agggtggtca
      301 agtggaccgc ctcgcgattc agaccttcag tggcgtagag ctcgagggcg gcgtcggcgc
      361 gcagcacgta gaccgagcag acttccgcga ccatgttggc cgcgatcaga acgacgatcc
      421 tgtcgaggcg cgcctgcggg ctgaccggct ccgccatgat ctcgcggagg cggcgcaaaa
      481 gcacgcgcgg gcccccggga gcaacgggca taggccgggt tccattcctt cgccggccgc
      541 aggcggccga ctgcaatgac cgtttctaca gagacgagag cgcaaacctc aagccgttcc
      601 gggcggaatc ggccccaggg cgctctcaca atgcattttc cacaggcgaa cgggccaccc
      661 cggacgcggg ccgggcagac gccgccgaaa aatgcgctac atcttgtcga ggccgtatag
      721 cgagtgcagc gtgtgcaccg caagctccgt ataggccgca tcgatcaaaa ccgagaactt
      781 gatctccgac gtcgtgatgg cgcggatgtt gatgcccttc tcggacaatg ccttgaaggc
      841 cttcgcggcg acgccggcgt ggctgcgcat gtcgacgccg atggccgaga tcttgaccac
      901 gtcggtggcg ccgtgcagct ccgcatagcc gatgcgctcg cggttggtct cgagaaggtc
      961 cttggcgcgc tcgtaatcgg cggtcggcac cgtgaaggtg atgtcggtcg tcactgcatc
     1021 gctcgagacg acctggatga tcatgtcgac attgatgttg gcgtccgcga gcggaccgaa
     1081 gatcgccgcc gccacgccgg gcttgtcggc cacccggcga agcgtgatct gggcctcgtc
     1141 cttggagtag gcgatgccgg tgacgacctg ctgttccacg atatcctcct cctcgcagat
     1201 gagggtgccc tgtttcggat cggccgggtc atcgaagctc gaccggacat aggtcggcac
     1261 cccgtgcatc atggcgagct cgacggagcg cacctgcaag accttggccc ccagcgatgc
     1321 catctcgagc atctcctcga aggagatgcg gtcgaggcgg tgcgccttgg tgacgatgcg
     1381 cggatcggaa gtgtagactc cgtccacgtc ggtataaatg tcgcagcgct cggccttgag
     1441 cgccgccgcg agcgcgaccg cgctcgtgtc cgagccgccg cggcccaggg tcgtgacgcg
     1501 gccgctctcc tgatgaatgc cctggaaccc ggataccacg gcgacggtgc gcccgtcggc
     1561 gaatcccttc aggatgccgg cggcgtcgat cccggcgatg cgcgcagaac cgtgggcgtc
     1621 cgaggtcagg atcggcacct gccagccctg ccacgagcgc gccgacaggc ccagatcctg
     1681 cagcacgatg gcgagcagcc ccgaggtcac ctgctcgccc gaggcgacga ccacgtcgta
     1741 ttcgcgcggg tcgtggaggc ggctggcctc gcggcaccag ccgaccagct cgttggtctt
     1801 gcccgccatc gcggatacga ccacggcgac gtcgtagccc gcctcgacct cgcgtttgac
     1861 gtggagggcg acgttgcgga tgcgctcgac cgtggcgacg gacgtgccgc cgaatttcat
     1921 gactaggcgg ggcatgaggg cctcgagggg gacggctacg gcagggccaa gggggagcag
     1981 cctcacctcg atccggcacg gcaggcgcct atcaacgaag aggcgccagt gtcaacgcgg
     2041 cccgtgaacc gttgttgccg gggagtaaac acgtgggtcg cgcgggccgg ggctggcagc
     2101 ctaaccacgc ctcgcctaag aaaaggcaaa gcgagccgcc cagatgacac gacccggccc
     2161 atccagcacc gtcgacccgt ccgaggtcgc gcgtttcgac cgcctggccc gggactggtg
     2221 ggacccgaac gggccgatgc gcgccttgca ccggctcaat cccgtgcggc tgcaatacat
     2281 ccgcgaccgg gcctgcaacc agttcggccg cgacgagcgc gcgccccact gcctgcacga
     2341 cctgactgtg ctcgacgtcg gctgcggcgc cggcctgctg tgcgagccgc tcgcccgcct
     2401 tggcgcgtcc gtcaccggac tcgacccggc ggccacgaat atcgcggtgg cgcggcttca
     2461 tgccgaaggt gccggcctcg ccatcgatta ccgcggcgac accgtcgagg cggttgtcgc
     2521 gcaagaggag cggttcgacg tggtcctcgc catggaggtg gtcgagcacg ttgccgacgt
     2581 gaatgcgttc gtgtcggcct gctgcgcggc ggtgaagccc ggcggcctgc tcgtgatggc
     2641 caccatcaac cgcacgctgc gtgcgttcgc gctggccatc gtcggcgccg aatacatcct
     2701 cggctggctg ccgaagggca cgcaccagtg ggacaagttc gtcacgcccg cggaattggc
     2761 ggatgcgatc gaggcggccg ggcttgcggt gatcaaccgg cgcggggccg tctacaaccc
     2821 gctcacggcg cagtggctgc tggccggcga catgtccgtg aactacatgc tcgcggcgga
     2881 gcgcgcgcct ggcgtcgcgc cctatagctc gggtgagccg gtgaagcgcg cgccatgatc
     2941 gccgtcaccg acgcgatcgc gatcgacgag cgcgagatca gcgagagctt cgtgcgcgca
     3001 tccggcccgg gtggccagaa cgtcaacaag gtcgcgagcg ccgttcagct tcgcttcgat
     3061 gtgcgccgct cgtcgtctct tccgaacgat gttgccatcc ggctcatgaa gctcgcgggc
     3121 agccgtctca cgcaggacgg cgtgctcgtc atcaccgcgc aacgcttccg ctcgcaggag
     3181 cgcaaccggg aggatgcgct cgagaggctg ctcgacctgg tgcggatcgc ggcggtggcg
     3241 ccggtcaagc gccgcaagac gaagccgacg aaggcatcca agcagcggcg gctcgagagc
     3301 aagagccgcc gttcccgcat caagactttg cggggcgcga agccgcgcgt ggagtgacga
     3361 cgctgcgctg gcggcgtccc aggatcgtcg ccagcgccac cggccggaaa tcccagacgt
     3421 cgacgccaac gtcgtattga cgaggcgcag gcttgagccg gccgtggctg tgtccgtgca
     3481 ggttgatcac gcctttgccc atgtcgtgcc aggtgcggaa cggataatgg cagaggacca
     3541 gccggcgtcc gtcgacgacg atctccgcat aatgctgcac gctctgccaa tgcggctgct
     3601 cgagcgtcgg cgcctcgtcg ttgttgccga cgagaagatg cttgcggccg ttgagcgagg
     3661 cgagcagctc ggcgatgcgc ttgcgcggcg ggccgaaggc gaaatcgccg aggtgccaga
     3721 tatcgtcgtc ggccccgacc acctcgttcc agcgctcgac catcacctgg tccatctcgg
     3781 cggccgacga gaacgggcgg cggtcgatgc gcaggcgcgg cgcatcgccg aaatgggtgt
     3841 cgctgatgaa gtatatcgtc atgccgcctt ataggtcgag cgtggcgccg atggcgaccg
     3901 gcgatgaaga accttcccgg ctcagctggg acaagcttct gggcgccgat tgagatcccc
     3961 ctttgaacgg aacgaaggca gtgatgggcc attatccatg tcggacctgg aagcgcatgg
     4021 cttggcccgc gatgcttgcg cggacgccct ggaccaaccc aagggtaatg ctcgctcgca
     4081 ggtcgatggt cggtgatcgt ccgcgggatc tggcgacaat tctcgagc
//
LOCUS       DATAIQ010000591         1616 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_60055, whole genome shotgun sequence.
ACCESSION   DATAIQ010000591 DATAIQ010000000
VERSION     DATAIQ010000591.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1616)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1616)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1616
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_60055"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(333..>1616)
                     /locus_tag="VHN20_09780"
     CDS             complement(333..>1616)
                     /locus_tag="VHN20_09780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018321124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PleD family two-component system response
                     regulator"
                     /protein_id="HEX2726096.1"
                     /translation="SAVNGPDALAICEQGLCDIVLLDVMMPGMDGFEVCRRLKNSPMT
                     AHIPVVMVTALDQPSDRLRGLEAGADDFLTKPVDDTALLARVRSLVRLKALIDELRTR
                     AVASRDYGIGDPLAAAAAETGQNAHVLIVDDRASSYERLASALAQYHRVEVETDPHRA
                     LMRAAEEPFDLALVSLDLEGHDGLRLCSQMRSLDRTRNISILALASQDDRARILRGLD
                     IGIGDFLVRPVDRNELLARVRTQVRRKRFTDRLRESVHASLELAVTDALTGLHNRRYL
                     DSHLGALFQDAVARGRQIAVLLLDIDRFKSINDTYGHDAGDEVLREFASRVRAHTRGI
                     DVVARYGGEEVVVLVPDTPLEGARAVAERIREQVETMPFPIQGGTSAVRVTVSIGVAA
                     RQGSDERGGDVLKRADTALYRAKGEGRNRVIAAAA"
BASE COUNT          273 a          530 c          548 g          265 t
ORIGIN      
        1 acctgagcat cgtagggcgt tcaaaacttt tgatcagcct atccgatgac cgacacgcta
       61 gcgaacctgc ggggcaaggc aaccccccgg cgctaggaac ggaggcttaa atctttgtaa
      121 aggttaaaca ttagctaccg ccaatgcaag tgcatcggct gcttctcagg cccgcaggcc
      181 cgccgagtgc ctggtcaggc ggcggaatcg gcccttttcc ttagctttgc cggtgtttta
      241 cgtgcgagaa cattccggcc atggtcttcc gcgcctgcag cttgccacgc cggctggcgc
      301 aatccagcca gggcagccta gggaaatatg cctcaagcgg cggcggcgat cacccgattg
      361 cggccctcgc ccttcgcccg gtagagggcg gtatcggcgc gcttgaggac atcgcccccc
      421 cgttcgtcac tgccctggcg ggcggcgacg ccgatcgaca ccgtgacgcg gacggccgac
      481 gtgccgccct ggatcgggaa cggcatggtt tcaacctgct cgcgaatgcg ctccgcgacc
      541 gcgcgcgccc cctcgagagg cgtatcgggg acgagcacca cgacctcttc gccgccgtag
      601 cgggcgacga cgtcgatgcc gcgcgtatgg gcgcggacac gggaggcgaa ctcgcgcagc
      661 acctcgtcgc cggcgtcatg accgtaggtg tcgttgatcg acttgaagcg gtcgatgtcg
      721 agaagcagga ccgcgatctg ccggccgcgg gcgacggcat cctggaacaa cgcgccgaga
      781 tgactgtcga gatagcgccg attatggagg ccggtcaggg cgtcagtgac cgcgagttcg
      841 agggaggcgt gcacgctctc gcgcaggcgg tcggtgaagc gcttgcgacg gacctgcgtg
      901 cgcacccggg cgagcagctc gttgcggtcg accggccgca cgagaaaatc accgatgccg
      961 atgtcgagac ctcgcaggat gcgcgcacgg tcatcctggc tcgccagcgc gagaatggag
     1021 atgttgcgcg tccggtcgag ggagcgcatt tggctgcaca accgcaggcc atcatgtcct
     1081 tcgagatcga ggctcacgag cgcgaggtcg aagggttcct cggcggcccg catcagagcc
     1141 cgatgcgggt ccgtttccac ctcgacacgg tggtattgag cgagggccga ggcgagccgc
     1201 tcatacgaac tcgcccggtc gtcgacgatg agcacgtgcg cgttctggcc ggtttcggcg
     1261 gcagccgccg ccagcggatc gccgatgccg tagtcgcgcg acgccacggc gcgcgtgcgc
     1321 agctcgtcga tcagggcctt caggcgcacg aggctcctga cgcgggccag aagcgccgtg
     1381 tcgtcgaccg gcttggttag gaaatcgtcg gcccctgctt cgaggccgcg caggcggtcg
     1441 ctcggctggt cgagggccgt gaccatcacc accggaatat gcgcggtcat cggcgagttt
     1501 ttgagccggc ggcacacttc gaagccgtcc atgccgggca tcatcacatc gagcagcacg
     1561 atgtcgcaca gcccctgctc gcagatggcc agcgcgtcgg gcccgttcac cgcgct
//
LOCUS       DATAIQ010000592         2969 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_123783, whole genome shotgun sequence.
ACCESSION   DATAIQ010000592 DATAIQ010000000
VERSION     DATAIQ010000592.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2969)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2969)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2969
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_123783"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..514)
                     /locus_tag="VHN20_09785"
     CDS             complement(<1..514)
                     /locus_tag="VHN20_09785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016811 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in linear amides
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetamidase/formamidase family protein"
                     /protein_id="HEX2726097.1"
                     /translation="MTIGKALAAATSGICIALALTATGAAQTTSPPGVAAPGAAPAPA
                     APPPGATTPVPPDLQDPKTFQPFVYGPLKNEGMVASGAVGKKPTTHLLPATPATTQWG
                     WFDNSQPPVLRINSGDTVVMETMMHSHNQIVPGITIEQVKKTRTDYPGRGPHTLTGPI
                     YVEEAEPGDVL"
     gene            complement(643..1149)
                     /locus_tag="VHN20_09790"
     CDS             complement(643..1149)
                     /locus_tag="VHN20_09790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015928406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HEX2726098.1"
                     /translation="MSHNHRGHDGAGKLYELIKDVRICMMTTVEPDGTLHSRPMWNQE
                     ADEAGDLWFFTRLSSPKVTEISRDGQVNLGYANPDKNDYVSVSGRAEIVRDRAKIEEK
                     WSAPLKAWFPDGKDDPQIALIRVHPEKGEYWDSPSSTIVHIYGYAKAALTGSSPAELS
                     DTKKVNLR"
     gene            1296..2423
                     /locus_tag="VHN20_09795"
     CDS             1296..2423
                     /locus_tag="VHN20_09795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010686118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0140663 - ATP-dependent FeS chaperone
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Mrp/NBP35 family ATP-binding protein"
                     /protein_id="HEX2726099.1"
                     /translation="MAVTREQVLQALSTVTLGGGQSLVASGRLSDVVLDQNRVMFSIA
                     IEPSEAAAMESVRRMAENAVRALPGAGQVLVSLTADRPMGRGPATTPQVTPGRPAGAP
                     SAKAQLIPGVKHVIAVASGKGGVGKSTTACNLALGLQALGRKVGILDADIYGPSMPKL
                     FGLHGKPRVLSGRILEPLDGYGVKVMSIGFMVEEETPMIWRGPMVMSAITQMLREVAW
                     GDLDVLVVDMPPGTGDAQLTMAQATPLAGAVIVSTPQDLALIDARRGVAMFRRVEVPI
                     LGIVENMATFVCPHCGQSSHIFGHGGARTEAERLGVPFLGEVPLNMTIRETSDAGRPV
                     VAVDPDGPHARSYKDMARQVWASLSGEGGRTARPAPKIVIE"
     gene            2476..2754
                     /locus_tag="VHN20_09800"
     CDS             2476..2754
                     /locus_tag="VHN20_09800"
                     /inference="COORDINATES: protein motif:HMM:NF015640.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system ParD family
                     antitoxin"
                     /protein_id="HEX2726100.1"
                     /translation="MGLNVTIDDDLARYVQAKVDAGQFSSPREVIENALRILASLEAT
                     DELIDNLTPEKSRWLRTAWDEGIESGDAGPPDIEEIKREARRRFEAEK"
     gene            2758..>2969
                     /locus_tag="VHN20_09805"
     CDS             2758..>2969
                     /locus_tag="VHN20_09805"
                     /inference="COORDINATES: protein motif:HMM:NF016876.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008657 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) inhibitor activity
                     [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA];
                     GO_process: GO:0030541 - plasmid partitioning [Evidence
                     IEA];
                     GO_process: GO:0051290 - protein heterotetramerization
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HEX2726101.1"
                     /translation="MQLRLTIQARRDLSDIWAYVAANCPDKADEILDLINERFRLIAS
                     YPLVGRARSDIASHVRLLAIERWVIL"
BASE COUNT          470 a          978 c          997 g          524 t
ORIGIN      
        1 gcagcacgtc gccgggctcc gcctcctcca cgtagatcgg gcccgtcagc gtgtgcgggc
       61 cgcgcccggg ataatcggtg cgcgtcttct tgacctgctc gatagtgatg ccaggcacga
      121 tctggttgtg cgaatgcatc atggtttcca tgacgaccgt gtcgccggaa ttgatgcgca
      181 gcaccggcgg ctggctgttg tcgaaccagc cccattgcgt tgtcgccggc gtcgccggga
      241 gcagatgcgt ggtcggtttc ttgccgacgg ccccggaggc gaccatgcct tcattcttca
      301 gcggaccata gacgaagggc tggaaggtct tgggatcctg gagatcgggc ggcacgggcg
      361 tggtcgcgcc tggcggcggc gccgccggcg caggcgccgc gccgggtgcg gcgactccgg
      421 gcggagaggt ggtttgtgcg gccccggtcg ccgtcagcgc aagcgcgatg caaatgccgc
      481 tcgtcgcagc ggcgagtgct ttcccgatcg tcatgaaacc cgtccttccc cgtttgtcgg
      541 cagcgaggaa tgcaagccgc atgcctcgct gccttctccc cggagaggaa gcgtaatccg
      601 gccggaagcg gcgtcaacaa cgatcgccgc ggcgcccgac ggtcagcgca ggttcacctt
      661 cttcgtatcg gagagctccg ccggggacga gccggtcagc gccgctttcg cataaccgta
      721 gatgtgcacg atcgtcgacg acgggctgtc ccaatactcg cccttctcgg gatggacgcg
      781 gatgagggcg atctgcgggt catccttgcc gtctgggaac cacgccttga gcggcgcgct
      841 ccacttctcc tcgatcttgg cgcgatctcg cacgatctcc gcgcggcccg acaccgagac
      901 atagtcgttc ttgtccggat tggcgtagcc gagattgacc tggccatccc tcgagatctc
      961 cgtcaccttc ggggacgaaa gccgcgtgaa gaaccacagg tcgccggcct cgtccgcctc
     1021 ctggttccac atggggcggc tgtggagcgt tccgtctggc tcgacggtgg tcatcatgca
     1081 gatgcgcacg tccttgatca gctcatagag cttgccggcc ccgtcatgcc cgcgatggtt
     1141 gtggctcata cctcttctcc tcgtaggaac cttcgataac ggccgaggcc gcccctggtt
     1201 gcccgacgcg acgatccgcg ccccgcttaa cctcacgcgc gggaaggctt acatgggcgg
     1261 cgaatgcagc aatgcgcgtt gatcgagagg gtccagtggc tgtcacccgt gagcaggttc
     1321 tgcaggcttt gtcgaccgtg acgctcggcg gcggccaaag cctcgtcgcg tcgggccgtc
     1381 tgtccgacgt ggtcctcgac cagaaccgcg tgatgttctc gatcgcgatc gagccgagcg
     1441 aggccgccgc catggagagc gtgcggcgca tggccgagaa cgcggtccgt gccctccccg
     1501 gcgccggcca ggtcctggtc agcctcacgg ccgaccggcc gatgggccga gggccggcca
     1561 cgaccccgca ggttaccccc ggccgcccgg ccggcgcacc gtccgccaag gcgcagctga
     1621 tccccggcgt caagcacgtg atcgcggtcg catcgggcaa gggcggggtc ggcaagtcga
     1681 ccaccgcctg caacctcgcg ctcgggctgc aggcgctcgg gcgcaaggtc ggcattctcg
     1741 acgccgacat ctacggcccg tcgatgccaa aactgttcgg gctgcacggc aagccgcgcg
     1801 tgctctcggg gcgcattctc gagccgctcg acggctacgg cgtcaaggtc atgtcgatcg
     1861 gcttcatggt cgaggaagag acgccgatga tctggcgcgg gccgatggtg atgtcggcga
     1921 tcacgcagat gctgcgcgag gtggcctggg gcgatctcga cgtgctcgtg gtcgacatgc
     1981 cgccaggcac cggcgacgcc cagctcacca tggcgcaggc gacgccgctc gccggcgccg
     2041 tcatcgtctc gacgccgcag gacctcgcct tgatcgacgc ccgccgcggc gtcgccatgt
     2101 tccggcgcgt cgaggtgccg atcctcggga tcgtcgagaa catggccacc ttcgtgtgcc
     2161 cgcattgcgg gcagagctcg cacatcttcg gccacggcgg cgcgcgcacg gaggccgagc
     2221 gcctgggcgt tcccttcctc ggcgaggtac cgctcaacat gacgatccgc gagacctcgg
     2281 acgcgggccg gccggtcgtc gcggtcgatc ccgacgggcc gcatgcccgc tcctacaagg
     2341 acatggctcg ccaggtctgg gcttcgctgt ccggcgaagg cggtcgcact gcccgtccgg
     2401 cgccgaagat cgtgatcgaa tgagccgctt ggaaaggcca tcagcgcaag gcatgatggc
     2461 ccagggagag aactgatggg cttgaacgta acgatcgacg atgatcttgc gcgctacgtg
     2521 caggcgaagg ttgatgctgg gcagttcagc tcgcctcgcg aagtcatcga aaatgcgttg
     2581 cgcattctcg cctcgctcga ggccactgac gagttgatcg ataatttgac tcccgagaaa
     2641 agtcgctggc tgcgcacagc ctgggacgaa ggcatcgaga gcggtgatgc agggccgccc
     2701 gatatcgagg agatcaagcg tgaggcgcgg cgccggttcg aagccgagaa atgatccttg
     2761 cagcttcggc tgacaatcca ggcgcgccgc gatctgtccg acatctgggc ctatgtggcc
     2821 gccaattgcc cggataaggc tgacgagatt ctcgacctca tcaacgagcg gtttagattg
     2881 atagccagtt accctttggt cggccgcgcg aggtccgaca tcgcgagcca cgtgcgcttg
     2941 ctggctatcg agcgctgggt gatcctcta
//
LOCUS       DATAIQ010000593         2986 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_336642, whole genome shotgun sequence.
ACCESSION   DATAIQ010000593 DATAIQ010000000
VERSION     DATAIQ010000593.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2986)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2986)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2986
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_336642"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..751
                     /locus_tag="VHN20_09810"
     CDS             <1..751
                     /locus_tag="VHN20_09810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HEX2726102.1"
                     /translation="EMLADAPDLEQLVVPIGGGGLVSGVAIAAKAINPSIEIVGVEAA
                     LYPSFRNAIDGEDRPIGGPTLAEGIAVKSVGELTLPIVRDLVADIILVDEAAIERAVN
                     AYATLQRTMAEGAGAAGLAAMLAQPDRFRGRKVGLVLCGGNIDARLLASVMVRELERE
                     DRIASFRVTTSDRPGLLGRLASRLGQLGANILEVSHGRLFLDVPAKGVTIDVTIETRD
                     ARHTAEVFEALAQDGLAPQRINARGLSEAVY"
     gene            880..1407
                     /locus_tag="VHN20_09815"
     CDS             880..1407
                     /locus_tag="VHN20_09815"
                     /inference="COORDINATES: protein motif:HMM:NF018028.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HEX2726103.1"
                     /translation="MSTSNNDMPEPTNYRQPPFPSTTLNPGANTARAGAPPTDGVLGR
                     RFFAYVIDIIVVFGIIALLAIAIFIFGILTLSLGWWLYTLMFPPVVAIIYNALTIGGP
                     AQSTIGMRMMGLKVFREDGSPPDKITAAVHALLFYIAASTFVLWVVDVVIGMVRDDRR
                     MGHDLLTGLILVRNR"
     gene            1515..2264
                     /locus_tag="VHN20_09820"
     CDS             1515..2264
                     /locus_tag="VHN20_09820"
                     /EC_number="2.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012456455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004057 - arginyl-tRNA--protein
                     transferase activity [Evidence IEA];
                     GO_process: GO:0016598 - protein arginylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginyltransferase"
                     /protein_id="HEX2726104.1"
                     /translation="MTSHPRDTPQFYLTSPSACPYLAGKEERKVFTHLVGKRARELNE
                     ILTQGGFRRSQTIAYRPACENCRACVSVRVLVNEFHPTTSMRRVLKSNRDLVGTLAPN
                     RPSSDQYSLFRRYLEARHSDGGMIDMTVLDYSMMVEDSHVETRIMEYRRRGPDTAING
                     RGHGNIVGVSLTDVLGDGLSMVYSFFDPELAFRSLGTFMILDHIAQAQALGLSYLYLG
                     YWVEGSRKMDYKARFLPQERLLPQGWERAEA"
     gene            complement(2428..>2986)
                     /locus_tag="VHN20_09825"
     CDS             complement(2428..>2986)
                     /locus_tag="VHN20_09825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DNA gyrase C-terminal beta-propeller
                     domain-containing protein"
                     /protein_id="HEX2726105.1"
                     /translation="SAGKFFALDAAKLPGGRGHGEPVRLMADLDASEELVALFVYRPG
                     AKRLVASSEGDGFIVAEDECVANTRKGKQVLNVDGEKARAVVCTEAAGDHVAMVGQNR
                     KLVVFPLAQIPEMGRGKGVRMQRYRDGGVSDAKVFALKDGLTWKDSSGRTWTVDKADL
                     KDWIGNRAEAGRLPPKGFPKSNKFG"
BASE COUNT          468 a         1042 c          979 g          497 t
ORIGIN      
        1 cgagatgctc gccgacgcgc ccgacctcga gcagctggtc gtgccgatcg gcggcggcgg
       61 cctcgtctcg ggcgtcgcga tcgccgctaa ggcgatcaat ccgtcgatcg agatcgtcgg
      121 cgtcgaggcg gcgctgtatc cctcgttccg caacgccatc gatggcgagg accgcccgat
      181 cggcggcccg accctggccg agggcatcgc cgtcaaatcg gtcggcgagc tgaccttgcc
      241 gatcgtgcgc gacctcgtcg ccgacatcat cctggtcgac gaggcggcga tcgagcgcgc
      301 cgtcaacgcc tacgccacct tgcagcggac aatggccgag ggcgcgggcg cggccggctt
      361 ggccgcgatg ctggcgcagc cggaccgctt ccgcggccgc aaggtcgggc tcgtgctgtg
      421 cggcggcaac atcgacgcgc gccttctcgc ctcggtgatg gtgcgcgagc tcgagcgcga
      481 ggaccgcatc gcctcgttcc gggtgacgac gagcgaccgt cccgggctgc tcggccgcct
      541 cgcgagccgg ctcgggcagc tcggcgccaa catcctggag gtttcgcacg ggcgcctgtt
      601 cctcgacgtt ccggccaagg gcgtcacgat cgacgtcacg atcgagacgc gcgatgcgcg
      661 gcacaccgcg gaggtgttcg aggcgctggc gcaggacggg ctcgcgccgc agcggattaa
      721 cgcgcgcggg ctgtcggagg ctgtgtattg atgacgagcg tatccgccag caagacccgc
      781 acaccttgcg ctcagagagc gcgcagctgc tggcgattcc gcgcaagccg gtcctgagtc
      841 catgcctttg agaccgcgga tcgagctccc atataagccg tgagcacgag caacaacgac
      901 atgcctgagc cgaccaacta tcgccaaccg ccctttccga gcacgacctt gaaccctggc
      961 gccaacacgg cccgtgctgg cgcgccgccg accgacggcg tcctcggccg gcgtttcttc
     1021 gcctacgtga tcgacatcat cgtcgtgttc gggatcatcg cgctactggc gatcgccatc
     1081 ttcatcttcg ggatactgac tctctccctc ggatggtggc tctacaccct gatgttcccg
     1141 cccgtggtcg ccatcatcta caacgcattg acgatcgggg ggccggcgca gagcacgatc
     1201 ggcatgcgga tgatgggcct gaaggtgttc cgggaggacg gcagcccgcc cgacaagatc
     1261 acggccgccg tgcacgccct gctgttctat atcgccgcga gcacattcgt cctgtgggtc
     1321 gtcgacgtgg tgatcggcat ggtccgcgac gaccgccgca tgggtcacga cctcctgacc
     1381 ggcctgatcc tcgtccgcaa ccggtgacgt gcggcctcgt cccgcacggc tcggcagttg
     1441 aggacggcga agctcgtgct atcgttgatg cttgatgccg ctccgacgtg ggcagcggtg
     1501 gaggtctcag ccgcgtgacg agccacccgc gtgacacccc acagttctac ctgacctcgc
     1561 cttcggcctg cccgtatctc gccggcaagg aggagcggaa ggtcttcacc catctggttg
     1621 gcaagcgcgc ccgcgagctc aacgaaatcc tgacgcaggg cgggttccgc cgctcgcaaa
     1681 ccatcgccta ccggcccgcc tgcgagaatt gccgcgcctg cgtgtcggtg cgcgtgctcg
     1741 tcaacgagtt ccatccgacc accagcatgc ggcgcgtgct caagtcgaac cgcgacctcg
     1801 tcggcacgct ggcgccgaac cggccgtcct ccgatcagta ttccctgttc cgccgctatc
     1861 tcgaggcccg gcattccgac ggcggcatga tcgacatgac ggtgctggat tactcgatga
     1921 tggtcgaaga cagccacgtc gagacgcgca tcatggaata ccgccggcgc ggccccgaca
     1981 cggccatcaa cggacgcggc cacggcaaca tcgtcggcgt ctcgctcacc gacgtgctcg
     2041 gcgacggcct gtcgatggtc tactcgttct tcgatccgga gctggcattc cgcagcctcg
     2101 gcaccttcat gatcctcgac cacatcgccc aggcgcaggc gctcggcctc agctacctct
     2161 atctcggcta ctgggtcgaa ggctcgcgca agatggacta caaggcgcgc ttcctgccgc
     2221 aggagcgcct gctgccgcaa ggctgggagc gggcggaggc gtagcgcctc gccgtctgcg
     2281 gggagaggac gagcggcgag cggcagcgag ccggccgggt gaaggaccgg gtgagggggc
     2341 cggctcagaa agaggctcct tcggatgcgc cccctcaccc gggctgcttc gcagactcgc
     2401 ctctccccgc aagcagggag agggttctca gccgaacttg ttgctcttcg ggaaaccttt
     2461 gggcggcagg cggccggcct cggcgcggtt gccgatccag tccttgagat cggccttgtc
     2521 gacagtccag gtgcggcctg aggagtcctt ccaggtcagc ccgtccttga gcgcgaagac
     2581 cttggcgtcg gagacgccgc cgtcgcggta gcgctgcatg cgcacgccct tgccgcggcc
     2641 catctcgggg atctgggcga gcggaaagac cacgagcttg cggttctggc cgaccatggc
     2701 gacgtgatcg ccggccgcct cggtgcagac gaccgccctg gccttctcgc cgtcgacatt
     2761 gagcacctgc ttgcccttgc gggtattggc gacacactcg tcctcggcca cgatgaaacc
     2821 atcgccctca ctcgacgcca ccaggcgctt ggcgccggga cgatagacga acagcgccac
     2881 cagttcctcc gaggcatcga gatcggccat caggcgcacc ggttcgccat ggccgcggcc
     2941 gccgggaagt ttggctgcat cgagggcaaa gaattttccc gccgag
//
LOCUS       DATAIQ010000594         2545 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_60087, whole genome shotgun sequence.
ACCESSION   DATAIQ010000594 DATAIQ010000000
VERSION     DATAIQ010000594.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2545)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2545)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2545
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_60087"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..264)
                     /locus_tag="VHN20_09830"
     CDS             complement(<1..264)
                     /locus_tag="VHN20_09830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013420539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HEX2726106.1"
                     /translation="MTALPAAAASTSVVTLGRAAAQDVANLVAEAGRRLRARVTVDGR
                     LSPERLEAEQHAAHGLAWLATYGEAIRELAAYAARQSEEARFGE"
     gene            481..1368
                     /locus_tag="VHN20_09835"
     CDS             481..1368
                     /locus_tag="VHN20_09835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012454084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HEX2726107.1"
                     /translation="MTRPRTILAILNIAYRRFLLHDGWAIASHIALSVLMSMFPFLIL
                     VTSLASFFGTGSLADEAADLILEAWPSEVGEPIANEVHRVLTEERRDILTIGAALALY
                     FASSGVESLRVGLNRAYGLRETRSLWFTRLESIAFVILGAVVMLGFAVLVVLGPLIWR
                     ALVHWLPGLDPLGWMIAFLRIGVATVLIVGALVVAHKFIPAGRRKFKDVLPGIGVTLM
                     LWIIGGLTFGSYLERYPGAYASMYGGLATAMIALVFLYVLASIFLFGGELNGTIIAAR
                     KRNLYRLHDQHFSEVVKAP"
     gene            complement(1374..>2545)
                     /gene="ccrA"
                     /locus_tag="VHN20_09840"
     CDS             complement(1374..>2545)
                     /gene="ccrA"
                     /locus_tag="VHN20_09840"
                     /EC_number="1.3.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043880 - crotonyl-CoA reductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="crotonyl-CoA carboxylase/reductase"
                     /protein_id="HEX2726108.1"
                     /translation="AIRKERHGPPEQSMQVEVLPTWPIGDDEVLVLVMAAGVNYNGIW
                     AALGEPISPLDVHKQPYHIAGSDASGIVWAVGAKVRRWKVGDEVVIHCNQDDGDDEEC
                     NGGDPMLSPSQRIWGYETPDGSFAQFCRVQSRQLMERPRHLTWEESASYTLTLATAYR
                     MLFGHQGHRLRPGDNVLVWGASGGLGVFGVQICAASGANAIGIISDESKRDYVLQLGA
                     KGVVNRKEFNCWGQMPKVNSPEYNEWLKEARRFGKAIWDVTGKKDVDIVFEHPGEQTF
                     PVSTLVVKRGGMVVFCAGTSGFNITFDARYVWMRQKRIQGSHFAHLKQAAAANRFVLD
                     RRIDPCMSEVFPWDRIPFAHTKMWKNQHAPGNMAVLVNSPRTGLRTFDDVLEAAS"
BASE COUNT          385 a          864 c          830 g          466 t
ORIGIN      
        1 ctcgccgaag cgggcttcct cggactgccg ggcggcatag gccgccagct cgcggatggc
       61 ttcgccgtag gtcgcgagcc acgccaggcc gtgcgccgcg tgctgctcgg cttccagccg
      121 ctccggcgag aggcggccat ccaccgtgac gcgggcgcgc aggcgccggc ccgcctcggc
      181 aacaaggttc gccacgtcct gcgccgccgc gcggccgagg gtcacgacgc ttgtcgatgc
      241 ggcggcagcg ggtaaggcgg tcatcagctt ctccagcgac gcgatcggcg catcgtcgtc
      301 acttccgcgc gttgcagcgc agcatagacg cgcctggcag ggttgttgag ccaaatctca
      361 cggtgaaaca ccccggctga cgggccaagc gagctgtggg agacaggcat ccggcgcagg
      421 gtgtcacttg cgccgcccac ccccctgcgc catgtccgga cagggaactg acggatcatc
      481 gtgactcgcc cccggaccat attggccatc ctgaacatcg cctaccggcg gttcctgctg
      541 catgacggct gggcgatcgc cagccacatc gccctgtcgg tgttgatgtc gatgttcccg
      601 ttcctgatcc tggtcacctc gctcgccagc ttcttcggga ccggttcact cgcggacgag
      661 gccgccgacc tgatcctgga ggcctggccc agcgaagtgg gcgagccgat cgccaacgag
      721 gttcaccgtg tcctcaccga ggagcgccgc gacatcctca cgatcggcgc ggcgctggcg
      781 ctctacttcg cctcgagcgg cgtcgagagc ctgcgcgtcg gcctgaaccg cgcctacggg
      841 ctccgcgaga cgcgctcgct ctggttcacg cgcctcgagt cgatcgcctt cgtgatcctc
      901 ggggcggtcg tgatgctcgg cttcgcggtt ctcgtcgtcc ttggtccgct gatctggcgc
      961 gccctcgtcc attggctgcc gggcctcgac ccgctcggct ggatgatcgc gttcctgcgc
     1021 atcggcgtcg ccacggtgct gatcgtcggc gcgcttgtcg tcgcccacaa attcatcccg
     1081 gcaggacggc gcaagttcaa ggacgtgctg cccggcatcg gcgtgacgct gatgctgtgg
     1141 attatcgggg ggctcacctt cggttcctat ctggaacgtt atccgggagc ttacgcgtcg
     1201 atgtacggcg gtctcgccac tgccatgatc gcgctggtgt tcctttatgt gctcgcgtcg
     1261 atcttcctgt ttggcggcga attgaacggc accatcatcg ccgccaggaa gcgcaacctc
     1321 tacaggctgc acgaccagca tttcagcgaa gtcgtgaagg cgccctgacg gcgtcaggag
     1381 gcggcttcca ggacgtcatc gaacgtgcgc aggccggtgc ggggcgaatt gacgagcacc
     1441 gccatgttgc cgggcgcgtg ctggttcttc cacatcttgg tatgcgcgaa cgggatgcgg
     1501 tcccacggga acacctcgct catgcaagga tcgatgcggc gatcgagcac gaagcggttg
     1561 gccgcggcgg cctgcttgag atgcgcgaaa tgcgagccct ggatgcgttt ctggcgcatc
     1621 cagacgtagc gcgcatcgaa cgtgatgttg aagccggagg tgccggcgca gaacaccacc
     1681 atgccgcctc gcttgacgac cagcgtcgag accggaaatg tctgctcgcc cggatgctcg
     1741 aacacgatgt cgacgtcctt tttgcccgtg acgtcccaga tcgccttgcc gaagcggcgc
     1801 gcctccttga gccattcgtt gtattcggga ctgttgacct tcggcatctg gccccagcag
     1861 ttgaactcct tgcggttgac cacgcctttg gcgccgagct gcagcacgta atcgcgcttg
     1921 ctctcgtcgg agatgatccc gatggcgttg gcgccggagg ccgcgcagat ctgcacgccg
     1981 aagaccccga gaccgcccga tgcgccccac accagcacgt tgtcgcccgg ccgcagccgg
     2041 tggccctgat ggccgaacag catgcggtag gcggtcgcga gcgtgagcgt gtagctggcc
     2101 gactcctccc aggtaaggtg gcgcggacgc tccatcagct ggcgcgactg cacacggcag
     2161 aactgggcga aggagccgtc aggcgtctcg tagccccaga tgcgctgcga cggagacagc
     2221 atcgggtcgc cgccattgca ttcctcgtcg tcgccgtcgt cctggttgca gtggatgacg
     2281 acctcgtcgc cgactttcca gcggcgcacc ttggcgccga ccgcccagac gatgccggac
     2341 gcgtccgagc cggcgatatg atagggttgc ttgtgcacgt cgagcgggga gatcggctcg
     2401 cccaaagcgg cccagatgcc gttgtaattg actcctgccg ccatcacgag gacgagcacc
     2461 tcgtcgtcgc cgatcggcca tgtcggcaaa acctcgacct gcatcgactg ttccggcggg
     2521 ccgtgccgct ccttgcggat cgccc
//
LOCUS       DATAIQ010000595         5768 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_30754, whole genome shotgun sequence.
ACCESSION   DATAIQ010000595 DATAIQ010000000
VERSION     DATAIQ010000595.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 5768)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5768)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5768
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_30754"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..587)
                     /locus_tag="VHN20_09845"
     CDS             complement(<1..587)
                     /locus_tag="VHN20_09845"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX2726109.1"
                     /translation="MRPKSLRAVAVAATFVVLATVPLWVGNTYYVNVASQILFWAVFA
                     LALNVLVGYAGLVSLGHAGLLGMAGYTLGLMLLAGHGHLAAVGAALVVTVATAAAFAV
                     LSLRATGIGFLMITLALGQILWGIAYRWASLTNGDNGINVTSRPAPFGFSLSTPASFY
                     YATLIVFAICVASMLLFVRSPFGASLRGTRDQPRR"
     gene            complement(584..1444)
                     /locus_tag="VHN20_09850"
     CDS             complement(584..1444)
                     /locus_tag="VHN20_09850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009339999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX2726110.1"
                     /translation="MSQWLILAVNSIALGGLLFLLSAGFSLIFGLMRIPNLMHGSFFM
                     LGAYLGTTFLDRNFGFWTAALLSTAAMVVIGGLIERLLLRRLAGQELAQVLLTLGLSF
                     IVADLCLMIWTGDPIQPPTPPDLRGAVNAFGMFFPFYRLVIVAIAVVIAIALWLMIDW
                     TRLGAMIRAGVDDPPIARVVGIKVSQLFTLIFCLGAGLAAFGGVMGAPYLSVYPGLDA
                     EMLPMALIVVILGGTGSLLGALVGSFLIGILYNFGQAMFPDLAYVILFLPMLLVLVLR
                     PQGLFGRAVP"
     gene            complement(1488..2732)
                     /locus_tag="VHN20_09855"
     CDS             complement(1488..2732)
                     /locus_tag="VHN20_09855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007755913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX2726111.1"
                     /translation="MTQKRRTVLKGMLATSAAVAMPTVLRAQAAPFKIALLTVKTGPL
                     AQGGIQMEQGIVTFLKEKNYTLGGRKVELISADTGGNPAGAKTKAQEVIERDRANIIL
                     GPLAAFELLAITEYVRAQGTPLISLAAAEDVTQRNVNPWVVRPSATSGQCSHVMADYA
                     AKELKLKRIATISEDFAFGHEQMAAFQRVFEDNGGKIVKKLWPPLVTPDYTPFIAQIP
                     QNVDGVFNGFAGSNPVKFMRSYADLGLKAKIPLLAGWTAMDDALLRTLGDEAAGVVSA
                     TFYTADHNTESNRRLIAAMQKDYNVLPGAYSAGMYIAGQCVEAALEKTGGKSDDKKAF
                     MEALRNISITDTPRGPVSFDRYGNVVGDVFIRRCERKGGKLVNTTIKTYPKVSQFWTY
                     PPEEFLKQPVYSRDNPPAKNLE"
     gene            complement(2875..4662)
                     /locus_tag="VHN20_09860"
     CDS             complement(2875..4662)
                     /locus_tag="VHN20_09860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011441996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HEX2726112.1"
                     /translation="MNDRVDDAAHRRDSSLKMRSEVRDGMRVDWDVPIAMDDGLVLRA
                     DVFRPVAEGRYPVILSYGPYAKGLAFQDGYPSAWQRMVEKHPDVAAGSSNLYQNWEVV
                     DPEKWVPEGYACVRVDSRGCGCSPGFIDHFSPRETRDFYDCIEWAGVQPWSSGKVGLN
                     GISYYGINQWHVASLQPPHLAAMCIWEGAADWYRDMTHHGGILSTFWANWYDMQVKTV
                     QYGAGERGRRSPVHGGLVCGPETLSEEELARNRCDFGDAIRAHPIDDDYHKARSPVWD
                     KVVTPFLSAANWGGQGLHPRGNFEGFYRAAAQDKWLEAHGIEHWTHFYTDYGRALQLR
                     FFDHFLKGEDNGWDRQPRVLLQVRHPGERFVERAENEWPLARTKWTKFFLDPADAALS
                     PEAPGGEAAITFDATGEGVTFLTPPLPTETEITGPSAAKLFVSSSTRDADLFVVLRVF
                     SADLKEVVFQGAIDPHTPIGQGWLRASHRKLDATLSKPWRPYHSHDAVQPLTPGEPVE
                     LDIEIWPTSIVVPAGYRIAVTVRGRDYEYGGGSGGRLSNFKNELKGCGPFLHDDPVDR
                     PADVFGGRTTLHFGRGRQPFLLLPVIPAK"
     gene            complement(4659..5549)
                     /locus_tag="VHN20_09865"
     CDS             complement(4659..5549)
                     /locus_tag="VHN20_09865"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX2726113.1"
                     /translation="MKGLVGVVGLGIMGGAIARNLVSAGWHVVGFDIDAARRAELAEA
                     GVAVTADVAALAREAPVILTSLPSAAALHDIVGRIAAAGVPRRIVVETSTLALDDKLA
                     AEAALTAAGHVALDCPLSGTGAQAKVKDLVVYASGDSASIAQLQLLFADFARQVHDLG
                     AFGNGSRMKFVANLLVAIHNVASAEAMVLGIKAGLDPHQLVKLVGAGVGTSRVFDLRA
                     PMMADNAYEPATMKVSVWQKDMAVIGRFAADLGCPTPLFSATEPIYAAAMESGHAAHD
                     TAAVCAVLETMAGIKRGHTA"
     gene            5656..>5768
                     /locus_tag="VHN20_09870"
     CDS             5656..>5768
                     /locus_tag="VHN20_09870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013165257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HEX2726114.1"
                     /translation="MRIGIAGLGRMGAAIAERLLEVGHDVAVWNRSPAKVKP"
BASE COUNT          940 a         1882 c         2029 g          917 t
ORIGIN      
        1 atgcgccgcg gctggtcgcg cgtgccccgc aggctggcgc cgaagggcga gcgcacgaac
       61 agcagcatcg acgcgacgca gatcgcgaac acgatcaggg tcgcgtaata gaacgacgcg
      121 ggcgtgctca ggctgaaccc gaacggcgcc ggccggctcg tgacgttgat gccgttgtcg
      181 ccgttggtga ggctggccca gcggtaggcg atgccccaca ggatctggcc gagcgctagg
      241 gtgatcatca gaaagccgat gccggtggcg cgcagcgaca gcaccgcgaa tgccgccgcg
      301 gtcgcgaccg tgacgaccag ggccgccccg accgcggcga gatggccgtg cccggcgagc
      361 agcatcagcc cgagcgtgta gccggccatg ccgagcagcc cggcatggcc gagggagacg
      421 aggccggcgt agccgacgag gacgttgagg gcgagcgcga acacggccca gaacaggatc
      481 tggctggcca cgttgacgta ataggtgttg ccgacccaca gcggcaccgt cgcgagcacg
      541 acgaaggtcg cggcgacggc gacggcccga agacttttcg gcctcatggc accgccctgc
      601 cgaaaagtcc ctgcggccgc aggacgagca cgagcagcat gggcaggaac aggatcacgt
      661 aggcgaggtc gggaaacatc gcctgcccaa aattgtacag gatgccgatc aaaaaactgc
      721 cgaccagcgc gccgagcagg ctgccggtgc cgccgaggat gacgacgatc agcgccatcg
      781 gcagcatctc ggcgtcgagc ccgggataca cggagagata cggcgcgccc atgacgccgc
      841 cgaaggcggc gagcccggcg ccgaggcaga agatcagcgt gaacagctgc gacaccttga
      901 tgccgacgac acgcgcgatc ggcgggtcgt cgacgccggc gcggatcatg gcgccgaggc
      961 gcgtccagtc gatcatcagc cacagggcga tggcgatcac cacggcgatg gcgacgatga
     1021 cgaggcggta gaacgggaag aacatgccga aggcattgac ggcgccgcgc aggtccggcg
     1081 gcgtcggcgg ctggatcgga tcgccggtcc agatcatcag gcagagatcg gcgacgatga
     1141 acgacagccc gagcgtcagc aggacctgcg ccagttcctg tccggcgagg cgccgcagca
     1201 ggaggcgctc gatgaggccg ccgatcacga ccatggcggc ggtgctgagg agcgccgccg
     1261 tccagaagcc gaagttcctg tcgaggaacg tcgtgccgag atacgccccc agcatgaaga
     1321 acgagccgtg catcaggttg gggatgcgca tcaggccgaa gatcagcgaa aagcccgcgg
     1381 agagcaggaa caacagccca ccgagcgcaa tgctgttgac ggccagaatc agccattggc
     1441 tcattcacac ctgcccgtat gcgtgctgca ccccgcggag acgcatctca ttcgaggttc
     1501 ttcgcgggcg ggttgtcgcg cgaatagacc ggctgcttga ggaactcctc gggcggatag
     1561 gtccagaact ggctcacctt cgggtaggtc ttgatggtgg tgttgacgag cttgccgccc
     1621 ttacgctcgc agcgccggat gaagacgtcg ccgacgacgt tgccgtaacg gtcgaagctg
     1681 accggaccgc gcggcgtgtc ggtgatcgag atgttgcgca gggcctccat gaaggccttc
     1741 ttgtcgtcgg acttgccgcc ggtcttttcg agcgccgcct cgacgcactg gccggcgata
     1801 tacatgccgg ccgagtaggc gcccggcagc acgttgtagt ccttctgcat ggcggcgatg
     1861 aggcgcctgt tgctctccgt gttgtggtcg gccgtgtaga acgtcgccga gaccacgccg
     1921 gccgcctcgt caccgagggt cctcaggagc gcgtcgtcca tcgccgtcca gccggcgagc
     1981 agcgggatct tcgccttgag cccgagatcc gcatacgagc gcatgaactt gaccgggttg
     2041 gagccggcga agccgttgaa cacgccgtcg acgttctgcg ggatctgggc gatgaagggc
     2101 gtgtagtccg gcgtcaccag cggcggccac agcttcttga cgatcttgcc gccgttgtcc
     2161 tcgaagacgc gctggaacgc cgccatctgc tcgtgaccga aggcgaagtc ctcggagatg
     2221 gtggcgatgc gcttgagctt gagctccttg gcggcgtaat cggccatcac gtgcgagcac
     2281 tgcccggagg tggccgaggg gcgcacgacc cacggattga cgttgcgctg ggtgacgtcc
     2341 tcggcggccg cgaggctgat cagcggcgtc ccctgggcgc gtacgtattc ggtgatggcg
     2401 agcagctcga aggccgccag cggcccgagg atgatgttgg cgcggtcgcg ctcgatcacc
     2461 tcctgcgcct tggtcttggc gccggccggg ttgccgccgg tgtcagccga gatcagctcg
     2521 accttgcgcc cgccgagtgt gtagttcttc tccttgagga aggtgacgat cccctgctcc
     2581 atctggatgc cgccttgcgc cagcgggccg gtcttgaccg tcagaagggc gatcttgaac
     2641 ggcgccgcct gcgcgcgcag caccgtcggc atggcgacgg cagcgctcgt ggcgagcatg
     2701 cccttgagca cggttctccg tttttgcgtc atggcgtttt ctccctggtt ctttggcctg
     2761 atgaccttgt cgtgattgcg cggtgatgat gcaggctttt gcgcgttgcg caatcgccat
     2821 cgtcgtcatg gccgggcttg tcccgcccat ggcgagcaat gaggttggac attctcactt
     2881 tgcggggatg acgggcagca gcaggaaggg ctgccgaccg cggccgaaat gcagcgtcgt
     2941 cctgccgccg aagacatcgg ccggacggtc gaccgggtcg tcgtgcagga acgggccgca
     3001 gcccttcagc tcgttcttga agttggagag gcggccgccg ctgccgccgc cgtattcgta
     3061 atccctgccg cgcaccgtca cggcgatgcg gtagccggcc gggacgacga tcgaggtcgg
     3121 ccagatctca atgtcgagct cgaccggctc gcctggcgtc agcggctgga ccgcgtcgtg
     3181 gctgtgatac ggccgccaag gttttgaaag cgtcgcgtcg agcttgcggt gggaggcccg
     3241 gagccagccc tggccgatcg gcgtgtgcgg gtcgatggcg ccctggaaca cgacctcctt
     3301 gaggtcggcc gagaacacgc gcagcactac gaacaggtcg gcgtcgcgcg tcgacgacga
     3361 cacgaacagc tttgccgccg acgggccggt gatttcggtt tccgtcggca gcggcggggt
     3421 caggaaggtg acgccctcgc ccgtcgcgtc gaaggtgatc gccgcctcgc cgcccggcgc
     3481 ctccgggctc agcgctgcgt cggcgggatc gagaaaaaac ttcgtccact tcgtgcgcgc
     3541 cagcggccat tcgttctcgg cgcgctcgac gaagcgctca ccgggatggc ggacctgcag
     3601 cagcacgcgc ggctgccggt cccagccgtt gtcctcgcct ttcaggaaat ggtcgaagaa
     3661 gcgcagctgc agggcgcggc cgtaatcggt gtagaaatgc gtccagtgct cgatgccgtg
     3721 cgcctcgagc catttgtcct gcgccgcggc gcgataaaag ccttcgaaat tgccgcgtgg
     3781 gtgcaggccc tgcccgcccc agttggcggc cgacaagaac ggcgtcacga ccttgtccca
     3841 caccggcgaa cgggccttgt ggtagtcgtc gtcgatggga tgggcacgga tcgcgtcacc
     3901 gaagtcgcag cggttccgcg ccagctcctc ctcggacagc gtctcggggc cgcagacgag
     3961 cccgccgtgc acggggctgc gccgcccgcg ctcgccggcg ccgtattgca cggtcttgac
     4021 ctgcatgtcg taccagttgg cccagaaggt cgacaggatg ccgccgtgat gggtcatgtc
     4081 gcggtaccag tcggcggcgc cttcccagat gcacatggcg gcgagatggg gcggctgcag
     4141 cgaggcgacg tgccactggt tgatgccgta atacgagatg ccgttgagcc cgaccttgcc
     4201 gctcgaccac ggctgcacgc cggcccattc gatgcagtcg tagaaatccc tggtttcgcg
     4261 cggcgagaaa tgatcgatga agccgggcga gcagccgcag ccgcgcgagt cgacgcgcac
     4321 gcaggcatag ccctccggca cccatttctc cggatcgacc acctcccagt tctggtagag
     4381 gttgctggag cccgcggcga cgtccggatg cttttcgacc atgcgctgcc aggcgctcgg
     4441 gtagccgtcc tggaaggcga ggcccttggc ataagggccg taggacagga tcacaggata
     4501 gcggccctcg gcgaccgggc gaaagacgtc ggcgcgcagc acgagcccgt cgtccatggc
     4561 gatcggcacg tcccagtcga cgcgcatgcc gtcgcgcacc tcgctgcgca tcttgagact
     4621 tgaatcgcgc ctgtgagccg cgtcgtccac cctgtcgttc acgccgtgtg tccccgcttg
     4681 atccccgcca tcgtctcgag caccgcgcac acggcggcgg tgtcgtgcgc cgcgtgcccg
     4741 ctttccatcg ccgcggcgta gatcggctcg gtggcgctga acagcggcgt cggacagccg
     4801 aggtcggcgg cgaagcggcc gatcaccgcc atgtccttct gccacacaga caccttcatg
     4861 gtggcgggct cgtaggcgtt gtcggccatc atcggcgcgc gcaggtcgaa cacgcgcgag
     4921 gtgccgacgc cggcgccgac cagcttgacg agctggtgcg gatcgagccc ggccttgatg
     4981 ccgagcacca tggcctcggc cgaggcgacg ttgtggatcg ccaccagcag gttggcgacg
     5041 aacttcatgc ggctgccgtt gccgaaggcg ccgaggtcgt gcacctgccg ggcaaagtcc
     5101 gcgaacagca gctgcagctg ggcgatgctg gcgctgtcgc cgctcgcata gacgacgagg
     5161 tccttgacct tggcctgcgc gccggtgccg ctgagcgggc agtcgagggc gacgtggccg
     5221 gccgcggtga gcgcggcttc ggccgcgagc ttgtcgtcga gcgccagcgt gctcgtctcg
     5281 acgacgatgc ggcgcgggac gccggccgcc gcgatccggc ccacgatgtc gtgcagggcc
     5341 gcggcgctgg gcaggctggt caggatcacc ggcgcctcgc gcgccagcgc cgccacgtcc
     5401 gccgtcaccg cgacgccggc ctcggcaagc tcggcgcggc gcgcggcgtc gatgtcgaag
     5461 ccgacgacgt gccagccggc ggaaacgaga ttgcgcgcga tggcgccgcc catgatgccg
     5521 agtccgacga ccccgacgag gcccttcatt gtttttcctt ggctccccgt ttgacgcctt
     5581 ctcgggcgcc ccttgcaggc tttgccggcc atgatagtga tcgcgcgatc acggggtcaa
     5641 tgaggggcgg ttgtcatgcg catcggaatc gcgggactcg gccgaatggg ggccgcgatc
     5701 gcggaacgcc tgctcgaggt cggccacgac gtcgccgtgt ggaaccgctc acccgcgaag
     5761 gtgaagcc
//
LOCUS       DATAIQ010000596         2193 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_308033, whole genome shotgun sequence.
ACCESSION   DATAIQ010000596 DATAIQ010000000
VERSION     DATAIQ010000596.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2193)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2193)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2193
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_308033"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..914
                     /locus_tag="VHN20_09875"
     CDS             <1..914
                     /locus_tag="VHN20_09875"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEX2726115.1"
                     /translation="DLLKSIPVRSNRFGFEPEITMKASKRKLRIYEVPISYHGRTDEE
                     GKKIGWKDGLKVFGVILHFWLVDDLYEESYGRGSLNNLSGTPQYVSWTARILRRYLGD
                     TVLELGAGIGNMTGRLMGKRLLYIAGETDPLYLHALRNRFLRTPNVCVSRIDPGRAED
                     FAGIGTQIDTVLCLNVLEYVEDPAATLGWAAQLLRPGGTLLVLVPQSPSLYCSIDRTL
                     GYRRRFSREDIGRLLTGAGLDIERTHQLNRVGAPAWWLYGKLLGRARINRVTLKAFDK
                     TVWLWRRIEFLLPWRGLTLIAVAKKPA"
     gene            962..1915
                     /locus_tag="VHN20_09880"
     CDS             962..1915
                     /locus_tag="VHN20_09880"
                     /inference="COORDINATES: protein motif:HMM:NF028222.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HEX2726116.1"
                     /translation="MPEPAAPATGEVLLRVREVGICGTDVELAAFRLGYPPPGCDYMI
                     PGHEAVAEVVAAGAGPLRVGDLVVPWVRRACPPSCRQCARGRRDLCLSGLYTERGILG
                     AHGYLAPLAADAAADLVAIPPALASVAVLIEPLSVVEKAIATGFRLALEAPRRALIVG
                     AGTIGILAALALVHRDLEVAVLSREASDSRRARLVRAAGAQYRSGAGAEYDLVLEAAG
                     TPEAATAAVRALAPCGVLVVLGAATVTPGFPLLNLIVHNQVVAGSVNASASDFAAAVD
                     DLGRFPRALLGQMIDRRSLRAFDSLAPPPAGGAPKRVYAID"
     gene            1940..>2193
                     /locus_tag="VHN20_09885"
     CDS             1940..>2193
                     /locus_tag="VHN20_09885"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX2726117.1"
                     /translation="MEFRAAEILLIEDNPSDARYTQIALAELGIANRLTVLSDGEQGI
                     QYLYGHGRFTGSPRPDCVLLDWNLPKADGSEVLQIIREDSR"
BASE COUNT          321 a          733 c          780 g          359 t
ORIGIN      
        1 ccgatctgct caagagcatc cccgtgcgct cgaaccgttt cggcttcgag cccgagatca
       61 cgatgaaggc gagcaagcgc aagctgcgca tctacgaggt gccgatcagc tatcacggcc
      121 gcaccgacga agagggcaag aagatcggct ggaaggacgg cctcaaagtc ttcggcgtga
      181 tccttcattt ctggctcgtc gacgacctgt acgaggagtc gtacgggcgc ggcagcctca
      241 acaacctgag cggcacgccg cagtatgtga gctggacggc gcggatcctg cggcgctacc
      301 tcggcgacac ggtgctcgaa ttgggcgcgg gcatcggcaa catgaccgga cgcctgatgg
      361 gcaagcggct gctctacatc gccggcgaga ccgatccgct ctacctgcac gccctgcgca
      421 accgcttcct gcgcacaccg aacgtctgcg tctcgcgcat cgatcccggg cgtgcggagg
      481 acttcgcggg catcggcacg cagatcgaca cggtgctctg tctgaacgtg ctcgagtatg
      541 tcgaggatcc ggcggcaacg ctcgggtggg cggcgcaact gctgcgtccc ggcggcacac
      601 tgctcgtgct ggtgccgcaa tcgccatcgc tctactgctc gatcgaccgg acgctcggct
      661 accgccgccg cttcagccgc gaagatatcg gacgcctgct cacgggcgcc ggtctcgaca
      721 tcgaacgtac gcatcagctc aaccgcgtgg gcgcgcccgc ctggtggctg tacggaaagc
      781 tgctcggacg cgcccggatc aaccgggtga cgctcaaagc cttcgacaag acggtgtggc
      841 tgtggcggcg gatcgagttc ctgctgccgt ggcgcggcct gacgctgatc gcggtcgcga
      901 agaagccggc gtgagggcgg tcgttctcga ttacgccgaa cgccgtgtcg ccttgcgcga
      961 cgtgcccgag cctgcggcgc ccgcgacggg cgaggtcctg ctgcgggtga gagaggtcgg
     1021 catctgcggc accgatgtcg agcttgccgc gtttcgtctc ggctacccgc cgccgggctg
     1081 cgactacatg atccccggac acgaggcggt ggcggaagtg gtggctgccg gcgcgggtcc
     1141 gttgcgcgtg ggcgatctgg tggtgccgtg ggtgcggcgc gcctgccctc cctcgtgccg
     1201 gcagtgcgcg cgcgggcggc gcgacttgtg cctgagcggc ctctacaccg agcggggcat
     1261 tctcggcgcg cacggctacc ttgcgccgct cgcagccgac gcggccgcgg accttgtcgc
     1321 gatcccgccg gctctcgctt cggtggccgt gctgatcgaa ccgttgagcg tggtcgagaa
     1381 ggcgatcgcg acaggcttcc ggctggcgct cgaggcgccg cggcgcgcgc tcatcgtggg
     1441 cgccgggacc atcgggatcc tcgccgcact ggcgctcgtg caccgcgatc tcgaggtcgc
     1501 ggtgctctcg cgcgaagctt ccgattcgcg gcgtgcacgg ctggtccggg ctgccggcgc
     1561 ccagtaccgg tccggtgcag gcgcggagta cgatctggtg ctggaggcgg cagggacgcc
     1621 cgaagcggcg acggcggcgg tgcgcgcact cgctccctgc ggcgtgctcg tcgtgctggg
     1681 agcggcgacg gtaacgcccg gcttcccgct gctgaatctg atcgtgcaca accaggtggt
     1741 cgcgggcagc gtcaacgcct ccgcgtccga tttcgcggcg gcagtcgacg atctcggccg
     1801 cttcccgcgc gcgctgctcg ggcagatgat cgatcggcgc tcgctccgcg cgttcgacag
     1861 ccttgcgcca ccgccggcgg gcggcgcgcc gaagagagtg tacgcgatcg actgagggta
     1921 cactgtgatc ggaggcagag tggaattcag ggccgcagag atactgctga tcgaggataa
     1981 tccctcggac gcacgctaca cccagattgc gctcgccgaa ctcggcatcg cgaaccgtct
     2041 gaccgtgctg tcggacggcg agcagggcat ccagtatctg tacgggcacg gccgcttcac
     2101 ggggtcgccg cgtccggact gcgtgctgct cgactggaat ctgcccaagg cggacggcag
     2161 cgaggtgctg cagatcatcc gcgaggactc gcg
//
LOCUS       DATAIQ010000597         1924 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_60130, whole genome shotgun sequence.
ACCESSION   DATAIQ010000597 DATAIQ010000000
VERSION     DATAIQ010000597.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1924)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1924)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1924
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_60130"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1508)
                     /locus_tag="VHN20_09890"
     CDS             complement(<1..1508)
                     /locus_tag="VHN20_09890"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071111 - cyclic-guanylate-specific
                     phosphodiesterase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing phosphodiesterase"
                     /protein_id="HEX2726118.1"
                     /translation="MGGPTPARYSASASEGNATSRGLDPRAILTSLGGVVYDWDVASD
                     SITWGLNAAEVFGVSDLSELSCGKSFALASESDAASTRHEVILNSETSDEGSGVAYRA
                     NYKLRVKPGCFVTVEDTGRWYAATDGRPAFAHGVVRIDRSNASEADGSRSGKSQDRSD
                     FLAQIRNEVAETARGKRSLALLVVAIEDLAELNEELGFEGADTVIHEVMRRIRTVMRR
                     RDKLMRYSGNRIAIALLSCPSEQLEGAISRLTSVVAAEPIETPDGTAMARLCIGAACA
                     PDHAADAPALLRRAEDALAAAKHEAGRSAIYSPALTRGAARASLEPRAIDVVDALNTR
                     RVLMARQPVVEARSRSLAFSEALVRLRSVDGRIVNAADLLPAVERAGLVPLIDARMLE
                     MAAKHLAAHPEERLSINVSPYTIETADWLSTLAAHLGARPGIASRLIIEVTETAAFRE
                     PETTRARLDAMKALGVAIAIDDFGTGHTSFKHLRSFPVDILKIDGAFVQNLSR"
     gene            complement(1678..>1924)
                     /locus_tag="VHN20_09895"
     CDS             complement(1678..>1924)
                     /locus_tag="VHN20_09895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726119.1"
                     /translation="LRLSKLSLEAGGWPGRLAAIAGGRIRRRSLPPLPKLRHPALACE
                     KLGDEGCQGPRAGAGCMGALVRQQDEGPSRMVLRRLM"
BASE COUNT          322 a          633 c          673 g          296 t
ORIGIN      
        1 cgcgacaggt tctgcacgaa ggcgccgtcg atcttgagaa tgtcgacggg aaagctgcgc
       61 aggtgcttga acgaggtatg tccggtgccg aaatcgtcga tggcgatggc tacgcccagc
      121 gccttcatgg cgtcgaggcg cgcgcgcgtc gtctcgggct cgcggaaggc cgccgtctcc
      181 gtcacctcga tgatcagccg cgaggcgatc ccgggacgcg cgccgagatg cgccgcgagg
      241 gtgctcagcc agtccgccgt ctcgatcgtg tagggcgaga cgttgatcga cagacgctct
      301 tcgggatggg cggcgagatg cttggcggcc atctcgagca tgcgggcatc gatgagcggc
      361 acgagcccgg cgcgctcgac cgcaggcagc aggtcggcgg cattgacgat gcggccgtcg
      421 accgagcgca agcgcacgag cgcttccgag aaggcgaggg accgtgagcg tgcctccacc
      481 accggctggc gcgccatcag cacccggcgc gtgttgagcg cgtcgacgac gtcgatggcg
      541 cgcggttcca ggctcgccct ggccgcgcca cgcgtcagcg cagggctgta gatcgcagac
      601 cggcccgcct cgtgcttggc ggccgcaagg gcgtcctcgg cccggcgcag gagcgcaggg
      661 gcatccgcgg catgatccgg agcgcaggcg gcgccgatgc acagccgcgc cattgcggtg
      721 ccatccggcg tctcgatagg ttcggcggcg acgacgctgg tcagacgcga gatcgcgccc
      781 tcgagctgct ccgacggaca ggacaggagg gcgatggcga tgcggttgcc ggaatagcgc
      841 atcagcttgt cgcgccggcg catcacagtg cggatgcgtc tcatcacctc gtggatgacc
      901 gtgtcggcgc cttcgaagcc gagctcttcg ttcaactcgg ccagatcctc gatggcgacg
      961 acgagaaggg ccagcgagcg cttgccgcgc gccgtctcgg ctacctcgtt ccggatctgc
     1021 gccagaaaat cggaccggtc ctgcgacttg ccgctgcgcg agccgtcggc ctcggaggca
     1081 ttggaccgat cgatccgcac gacgccgtgc gcgaaggccg gacggccgtc ggtggcggca
     1141 taccagcgcc cggtgtcctc gacggtgacg aagcagccgg gcttcacgcg aagcttgtaa
     1201 ttggcccgat aagcgacgcc gcttccctca tcggaggttt ccgaattcag gatcacctcg
     1261 tgacgggtgc tagccgcgtc cgattcgctg gccagcgcga aggatttccc gcatgacagc
     1321 tcggacagat cggagacccc gaacacctcg gcggcgttga ggccccatgt gatcgaatcg
     1381 gaggcgacgt cccagtcgta aacaaccccg ccgagggagg tcagaatagc ccgtggatcg
     1441 aggccgcggc tcgttgcgtt cccttcggaa gcggaggcag agtaccgagc aggcgtgggg
     1501 ccccccatgg cggtcctttc gagccgttct ggcgattgag gtggctatgc ccatggcggg
     1561 acacgaggga accgcgccgc ccggacaaat gtttcgaaat gatgcgggca cggaccttaa
     1621 cggcacgtaa aatttggccg caaacttgct ctgttaagca tcatggaagc ggacgcatta
     1681 catcaggcga cgcagcacca tccgggacgg gccctcgtcc tgctggcgga cgagcgcgcc
     1741 catgcacccg gcgccagccc gcggcccctg gcaaccttca tcgcccagct tctcgcatgc
     1801 cagggccgga tggcgcagtt tcggcagcgg cggcaggctc cgtcgtcgga tgcggccgcc
     1861 cgctatcgcg gcgaggcggc ccggccagcc gcccgcttcg agcgaaagct ttgaaagcct
     1921 aagg
//
LOCUS       DATAIQ010000598         3517 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_30919, whole genome shotgun sequence.
ACCESSION   DATAIQ010000598 DATAIQ010000000
VERSION     DATAIQ010000598.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3517)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3517)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3517
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_30919"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            351..644
                     /locus_tag="VHN20_09900"
     CDS             351..644
                     /locus_tag="VHN20_09900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726120.1"
                     /translation="MAYHLGLLQAKIEQIAERAGVSVYDRLTLEGLLAALPWAERRRV
                     SLFLKASRAQSDDEALHQAIEILSSLASRAWTDAPPADSGTGQTRPWSGAERP"
     gene            772..1092
                     /locus_tag="VHN20_09905"
     CDS             772..1092
                     /locus_tag="VHN20_09905"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HEX2726121.1"
                     /translation="MSSKRAYERKEAFVPGRILLNIPGFSGYCTIRDLSQGGAKLAFG
                     TVPHLPDSFELHIPSQGKVHLVEVRWQRGLQIGVQFQSSRTVSITENAVAVPATGRAR
                     APFR"
     gene            complement(1061..1969)
                     /locus_tag="VHN20_09910"
     CDS             complement(1061..1969)
                     /locus_tag="VHN20_09910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006613381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar kinase"
                     /protein_id="HEX2726122.1"
                     /translation="MEALFIGQSYIDVTFVTDYMPTGDEKTVAEDYAISFGGNAVTAA
                     FCCAKLGIAPDLLSSIADDWLGRMFIDMAAKYGVSVHHRKVRESSLSFIMPREGRRAI
                     VHCRDDHYLHPFPPLNLEGCRALHLDGHQADAALHYAKACREAGILTSLDGGGLRSNT
                     HELLGFVDVAVVAERLCEQMKLTPAQMLDYLQSRGCRIGGVTLGEQGMLWYDEKGVRQ
                     TLPALDVPRERIIDTNGAGDIFHGAYVYSAMAQPQARWRDHFVFARAASAHSIQHLGN
                     EASLPSIVDVQMTERAFSEKVPEPAQ"
     gene            2112..>3517
                     /gene="trmFO"
                     /locus_tag="VHN20_09915"
     CDS             2112..>3517
                     /gene="trmFO"
                     /locus_tag="VHN20_09915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate--tRNA-(uracil(54)-
                     C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO"
                     /protein_id="HEX2726123.1"
                     /translation="MRAIEPIHVVGGGLAGSEAAWQIAAAGVPVVLHEMRPVRATDAH
                     KTSGLAELVCSNSFRSDDAEANAVGLLHQEMRRLGSLIMREGDAHQVPAGGALAVDRD
                     GFSAAVTAALEAHPLVTIAREEIAGLPPADWSSVIIATGPLTSPALAEAVGGITGEAE
                     LAFFDAIAPIVYRDTIDMDKAWFQSRYDKAGPGGTGADYINCPLDREQYEAFIAALLA
                     GDKTSFKEWEASTPYFDGCLPIEVMAERGPETLRHGPMKPIGLTNPHRPDQKPYAVVQ
                     LRQDNALGTLFNMVGFQTKLKHGEQSRIFRAIPGLEKAEFARLGGLHRNTYLNSPKLL
                     DPSLRLRAMPRLRFAGQITGCEGYVESAAVGLIAGRFAAAERLGRPVVPLPATTALGA
                     LINHITGGHIETIDEGPRSFQPMNVNFGLFPPLAQAPKAPDGKRLRGPAKALARKRAL
                     TERARTDLSAWLGHTPLPA"
BASE COUNT          582 a         1185 c         1180 g          570 t
ORIGIN      
        1 atttccggct gagcgattgc ggcgctttac gtattcaaga gctaaatgca gccaaggttt
       61 acaaaggtga atgcggccgg gggccggttc cgcaacaatc ccccttgcga gcgcgggttt
      121 ctcctcccaa gcgtgctcga acggccccgc cggtccatct ctatgctccc ttgccggcgg
      181 ggccacctcc tctcagccga cacgtgctgc gatccacgcg attgagcaga agtgtcgcac
      241 cccgaaactt tctccacgcg cgcgcgtttt agtatttcgt cgttcggccg tgttgcgggg
      301 gtttcgttgc gttgacgtcg gggaaagagt tccgccccga agcgggcgaa gtggcctatc
      361 atctgggcct tctgcaggcg aagatcgagc aaatcgccga acgggccggc gtgtccgtgt
      421 acgaccggct caccctggag gggctgctgg cagccctgcc ctgggcggag cgacgccgtg
      481 tcagcctgtt cctcaaggcg tcccgcgcac agtccgacga cgaagccctg caccaggcca
      541 tcgagatcct ttcgtcgctc gcctcgcggg cgtggaccga tgcgccgcca gcggattccg
      601 gaaccggcca gaccaggccc tggtcaggcg cggagcgccc ctaagaacga gggccagcaa
      661 ggctaacaga tcgttagcag gagcctgcga cgggcgcggt cgggccccgt gcgtccatgg
      721 aaatttaacc aggggcgcct agagctacgc ttgcgtgacg cgggacccgc agtgtcgagt
      781 aagcgagcat acgagcgcaa agaagccttc gttccgggca ggatcctcct gaacatcccg
      841 ggcttctcgg gctactgcac gatccgcgac ctctcgcagg gcggcgccaa gctcgctttc
      901 ggaaccgtcc cgcacctgcc cgacagcttc gagctgcaca tcccgtcgca aggcaaggtc
      961 cacctcgtcg aggtgagatg gcagcgcggg cttcagatcg gcgtccagtt ccagagctca
     1021 cgcaccgtca gcatcaccga gaacgcggtt gcggtgccgg ctactgggcg ggctcgggca
     1081 ccttttcgct gaaggcgcgc tcggtcatct ggacatcgac gatgctcggc aggctcgcct
     1141 cgttgccgag gtgctggatg gaatgcgccg acgcggcgcg ggcgaacacg aagtggtcgc
     1201 gccagcgcgc ctgcggctgc gccatcgccg aatagacgta ggcgccgtga aaaatatcgc
     1261 cggccccgtt ggtgtcgatg atgcgctcgc gcggcacgtc cagggcgggc agcgtctggc
     1321 gcacgccctt ctcgtcgtac cacaacatgc cctgctcgcc gagcgtgacg ccgccgatgc
     1381 ggcagccgcg tgactgcagg taatcgagca tctgcgccgg cgtgagcttc atctgctcgc
     1441 acagccgctc ggcgaccacg gcgacatcga cgaagccgag aagctcgtgc gtgttggagc
     1501 gcaagccgcc gccgtcgagg gacgtcagga tgccggcctc gcggcaggcc ttggcatagt
     1561 gcagggccgc gtccgcctga tggccgtcga gatgcagggc gcggcagccc tcgaggttga
     1621 gcggcgggaa gggatgcaga tagtggtcgt cgcggcagtg cacgatcgcc cgccggcctt
     1681 cacgcggcat gatgaacgag agcgacgatt cccgcacttt ccggtggtga accgaaacgc
     1741 cgtatttggc agccatgtcg atgaacatgc ggcccagcca gtcgtcggcg atcgacgaca
     1801 ggaggtcggg cgcgatgccg agcttggcgc aacagaacgc cgccgtgacc gcattgccgc
     1861 cgaacgagat ggcgtagtct tccgccacgg tcttctcgtc gccggtcggc atgtagtcgg
     1921 tcacgaaggt gacgtcgatg tagctttgcc cgatgaagag cgcttccatg cgtggctgtc
     1981 ccggtgtctc gcgctatatg cggccttccg gcgcgtccgc caagcctgtt gtccaggcct
     2041 gttgacgggg cgcctgagcc ctcgcggcga atcgccttga tccggccgcc acaaggtccg
     2101 atatcgtccg catgagggca atcgaaccca ttcacgtggt cggcggcggg ctcgccggct
     2161 cggaagcagc ctggcagatc gccgcggccg gcgtgccggt ggtgctccac gagatgcgtc
     2221 ccgtgcgcgc caccgacgcg cacaagacgt ccggcctcgc cgagctggtc tgctccaact
     2281 cgttccggtc ggacgacgcg gaagcgaatg cggtcgggct gctgcatcag gagatgcgcc
     2341 ggctcggttc gctgatcatg cgcgagggtg atgcccatca ggtcccggca ggcggcgcgc
     2401 ttgccgtcga ccgcgacggt ttctcggcgg cggtgacggc ggcgctcgag gcgcatcccc
     2461 tggtcacgat cgcgcgcgag gagatcgccg gcctgcctcc ggccgactgg agctccgtca
     2521 tcatcgcaac cggccccctg acctccccgg ccctggccga ggcggtcggc ggcatcacgg
     2581 gcgaggcgga gctggcgttc ttcgacgcga tcgctccgat cgtctatcgc gacacgatcg
     2641 acatggacaa agcttggttc cagtcgcgat acgacaaggc ggggcccggc ggcaccggag
     2701 ccgactacat caactgcccg ctcgaccgcg agcaatacga ggctttcatc gcggcgctgc
     2761 tcgccggcga caagacgtcg ttcaaggagt gggaggcgtc gacaccatat ttcgacggct
     2821 gcctgccgat cgaggtgatg gccgagcgcg ggcccgaaac gctgcggcac ggcccgatga
     2881 agccgatcgg gctgaccaac ccgcacaggc cggaccagaa gccttacgcg gtcgtgcaac
     2941 tgcgccagga caatgcgctc ggcaccctgt tcaacatggt cggcttccag accaagctca
     3001 agcacggcga gcagagccgc atcttccgcg ccatacccgg gctcgagaag gccgagttcg
     3061 cgcggctcgg cggactgcat cgcaacacct atctcaactc gccaaagctg ctcgatccct
     3121 cgctgcgcct gagggcgatg ccgcgactgc gcttcgccgg gcagatcacc ggctgcgaag
     3181 gctatgtgga gagcgccgcc gtcggcctca tcgcggggcg cttcgcggcg gccgaacgtc
     3241 tcggccggcc ggtcgtaccg ctgcccgcga cgacagcgct tggcgcgctg atcaaccaca
     3301 tcacgggcgg gcatatcgag acgatcgacg aggggccgcg ctcgttccag ccgatgaacg
     3361 tcaatttcgg cctgtttccg ccgctcgccc aggcgccaaa agcgcccgac ggcaagcggc
     3421 tgcgcgggcc ggcgaaggcc ctggcgagga aacgggcgct gactgagcgc gcgcgcacag
     3481 acctgtcggc atggctcggc catactcctc ttccggc
//
LOCUS       DATAIQ010000599         3259 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_308200, whole genome shotgun sequence.
ACCESSION   DATAIQ010000599 DATAIQ010000000
VERSION     DATAIQ010000599.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3259)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3259)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3259
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_308200"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..613)
                     /locus_tag="VHN20_09920"
     CDS             complement(<1..613)
                     /locus_tag="VHN20_09920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HEX2726124.1"
                     /translation="MGAFNAIVIEKGDAGQRVGITRFDEADLMDGDVTVRVTHSTVNY
                     KDGLAITGKAPVVRRFPMIPGVDFAGVVEASSNADFRPGDQVILNGWGLGETHLGAYA
                     EKARVKGDWLIPLPQGLSPAEAMAIGTAGYTAMLSLMALERHGLTPGQGAAIVTGAAG
                     GVGSTAIALLAQAGWHVIASTGRPQEAGYLKDLGAAEVIDRSEL"
     gene            complement(688..1923)
                     /locus_tag="VHN20_09925"
     CDS             complement(688..1923)
                     /locus_tag="VHN20_09925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX2726125.1"
                     /translation="MLASSDRGSRFAPELIVAAGCLIALITFGPRASAGLFQVPMTTE
                     FGWGRDLFSLAIAIQNLLWGLGQPFAGAIADRFGARKVLCVGGLLYALGLVVMAHATT
                     PGLLHLGAGVLIGFGLSGCSFNLVLGAFGKLLPDSWRPLAFGAGTAAGSLGQFFYPPI
                     GSAIIGNLGWYQALIVFAVTVLLVLPLSIPLATRAIGGSAVAGPSAANQSIAEALREA
                     FRHRSYVLLVLGFFTCGFQLAFITVHLPAYLKDANLPLWVGGWTLASIGLANAVGSLG
                     SGWLSTRMSKRWLLAWIYLARSVVILAFILLPASPLTAIAFGIAIGFLWLSTVPPTSS
                     LVMLMFGTRYMAMLYGFAFFSHQVGGFLGVFLGGVLYEASGSYALVWWLSIALGLASA
                     VINLPIEERPVERAVAQPA"
     gene            complement(2075..2239)
                     /locus_tag="VHN20_09930"
     CDS             complement(2075..2239)
                     /locus_tag="VHN20_09930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012456935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726126.1"
                     /translation="MNEGDPKKPGDEVPPGTPQSGEANCRRCHGSGVEAEPCPDCGGS
                     GMVVVLVADA"
     gene            complement(2354..>3259)
                     /locus_tag="VHN20_09935"
     CDS             complement(2354..>3259)
                     /locus_tag="VHN20_09935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell wall hydrolase"
                     /protein_id="HEX2726127.1"
                     /translation="SGKGAPAVASGPSLSRRGGELRAGARSGLSRVIFGHDESGPPVL
                     LMPFEDPGTDLNQGFEPFAGPDATTTQQASSVQSPAAAAAGSTGAARGPRHSPDGATP
                     SVARAVALASATPAPADATPVEIAAAPVALPSRPMTPRGFAAAPPDAANAAEASRYAG
                     LINPDHVAREQRCLAEAVYFEARSEPEEGQAAVAQVILNRVKSGLYPTSVCGVVYQNR
                     HRHLACQFTFACEGKSLRVSDAEAWDTARRVARDVMDGKTYVADVGGATHYHADYVRP
                     YWSRRLKKMDVIGRHIFYKLRPGQT"
BASE COUNT          564 a         1101 c         1165 g          429 t
ORIGIN      
        1 agagctcgct gcggtcgatg acttcggcgg cgccgagatc cttcaggtaa ccggcttcct
       61 gcgggcgccc cgtcgaggcg atcacgtgcc acccagcctg ggccagcagg gcgatggcgg
      121 tcgagccgac cccgccggcc gcgcccgtga cgatggcggc gccctgcccg ggcgtgaggc
      181 cgtgccgctc cagcgccatc agcgacagca tcgccgtgta gcccgcggtt ccgatggcca
      241 tggcctcggc gggcgagaga ccttgcggga gcgggatcag ccagtctcct ttgacgcgag
      301 ccttttccgc ataggcgcca agatgcgtct cgccgaggcc ccagccgttc aggatgacct
      361 ggtcacccgg cctgaagtcg gcattcgagg acgcctcgac gacgccggcg aaatcgacgc
      421 cggggatcat ggggaaacgg cgcacgaccg gggccttgcc cgtgatggcc agcccgtcct
      481 tgtagttcac agtcgagtgc gtcacgcgca cggtgacgtc gccatccatc aggtcggcct
      541 cgtcgaagcg cgtgatgccc acgcgctgcc cggcatcgcc cttctcgatc acgatcgcgt
      601 tgaacgcgcc catggttcct cctcggtccg gagaattgtg ccgcgctgca gcaagcgggg
      661 caagacgggc gcgcaagcga aaggtggtta tgccggctgc gccacggccc gctcgacggg
      721 ccgctcctcg atcggcaggt tgatcaccgc cgaggcgaga ccgagggcga tcgacagcca
      781 ccagacgagg gcgtagctgc cggacgcctc gtagagcacg ccgccgagga acacgccgag
      841 gaagccgccg acctggtgcg agaagaaggc gaagccgtag agcatggcca tgtagcgggt
      901 gccgaacatc agcatcacga gcgacgaggt cggcggcacc gtcgacagcc acaggaagcc
      961 gatggcgatg ccgaacgcga tcgccgtgag cggcgaggcc ggcagaagaa tgaaagccag
     1021 gatcacgacg gagcgcgcca aatagatcca ggcgagcagc cagcgcttgg acatgcgcgt
     1081 cgacagccat cccgagccga gcgagccgac ggcgttggcc agcccgatcg atgccagcgt
     1141 ccagcctccg acccacagcg gcaggttcgc gtccttcaga taagccggca gatgcacggt
     1201 gatgaaggcg agctggaagc cgcaggtgaa gaagccgagc acgaggagca cgtagctgcg
     1261 gtggcggaat gcttcccgca gggcctcggc gatcgactgg ttcgcggccg acgggccggc
     1321 gacggccgag ccgccgatgg cgcgggtggc aagcgggatc gacagcggca gcacgagcag
     1381 cacggtcacc gcgaacacga tgagcgcctg ataccagccg agattaccga tgatcgcgct
     1441 gccgatcggc ggatagaaga actggccgag cgaccccgcc gccgtgccgg ccccgaaggc
     1501 gagaggccgc cagctgtccg gcagcagctt gccaaacgcg ccgagcacca gattgaacga
     1561 acagcccgac aacccgaagc cgatcaggac gcccgccccg agatgcagca ggccgggagt
     1621 cgtggcgtgc gccatcacga cgaggccgag ggcataaagc agcccgccca cgcagagcac
     1681 cttgcgtgcc ccgaaacggt ccgcgatggc gccggcgaaa ggctggccga ggccccacaa
     1741 caggttctgg atggcgatcg ccaggctgaa caggtcgcgg ccccagccga attccgtcgt
     1801 catcggcacc tggaacagcc cggctgaggc gcgcgggccg aacgtgatca gcgcgatgag
     1861 acagcccgcc gcgacgatga gctcgggcgc gaaacgggag ccgcggtcgg acgaggccag
     1921 catgagaagc tccggcgcgg gccgaatgcg cggcctgcgc aaatctgtgc ggatctcggg
     1981 atgggcgcga gagccgggag gacggaattt atccgacggc tacggtccgg ccaaacgcgg
     2041 tgaattcatt gctgccatca cgccggtgaa tggatcacgc gtccgcgacc aggacgacga
     2101 ccatgccgct gccgccgcaa tcgggacacg gctcggcctc gacaccgctg ccatggcatc
     2161 gccggcagtt cgcttcgccg gattggggcg ttccgggcgg gacctcgtcg cccggcttct
     2221 tgggatcacc ttcgttcatg ggaggcagaa cgcagccgcg gccagatagg tgccgggcgt
     2281 ccgcttgcct cgcgacacac gcgcggggaa ggcgcgcgct cctcgcggag ccttcgagcg
     2341 gggaggggag gggtcaggtc tgcccgggtc tcagcttgta aaagatatgg cgcccgatca
     2401 cgtccatctt cttcaggcgc cgcgaccaat atggccgcac gtaatcggca tggtagtggg
     2461 tcgcgccgcc gacatcggcc acataggtct tgccgtccat cacgtcgcgg gcgacgcgcc
     2521 tcgccgtgtc ccaggcctcg gcgtcgctga cgcgcagcga cttgccttcg caagcaaagg
     2581 tgaactggca cgccagatgg cggtggcggt tctgatagac gacgccgcag acggatgtcg
     2641 gataaaggcc gctcttgacg cggttgagga tcacctgggc gactgcggcc tggccttcct
     2701 cgggttcgct gcgcgcttcg aaatagaccg cttccgcgag gcagcgctgc tcgcgcgcca
     2761 cgtggtcggg attgatcagg ccggcatacc ggctcgcctc cgccgcattg gccgcgtcgg
     2821 gtggggccgc cgcgaagccg cgcggcgtca tcggccgcga cggcagcgcg acgggagcgg
     2881 cggcgatctc gacgggcgtc gcatcggccg gcgcgggggt cgctgacgcg agcgccacgg
     2941 cgcgcgccac gctcggcgtc gcgccgtccg gtgaatggcg cgggccgcgc gccgcgcccg
     3001 tcgatccggc ggcggcggcc gcgggcgatt ggaccgagct cgcctgctgc gtggtcgtcg
     3061 cgtcggggcc agcgaacggc tcgaagccct ggttcagatc ggtgcccgga tcctcgaacg
     3121 gcatcaggag aaccggcggc ccgctttcat cgtgaccgaa gatcacccgg gacaatccgg
     3181 accgtgcgcc ggcacggagt tcaccgcccc ggcggctcag gctcggcccc gacgcgacgg
     3241 cgggggcacc tttgcccga
//
LOCUS       DATAIQ010000600         6722 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_152935, whole genome shotgun sequence.
ACCESSION   DATAIQ010000600 DATAIQ010000000
VERSION     DATAIQ010000600.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 6722)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6722)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6722
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_152935"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(288..1349)
                     /locus_tag="VHN20_09940"
     CDS             complement(288..1349)
                     /locus_tag="VHN20_09940"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HWE histidine kinase domain-containing protein"
                     /protein_id="HEX2726128.1"
                     /translation="MTIRILLLEDSDLDAELIAGHLRRAELPHAITRVTSREDYVRAL
                     SDPHDLILADYVLPSFDGLAALELAREKAPQVPFIFVSGTLGEEIAIDSFKRGVTDYV
                     LKQRLVRLPAAITRALAEAREKAERQQAEAHLRVLVAELSHRVNNTIAIIQAIATQTL
                     RDARSLEDFSDSFVPRLVSLGKTHDLLTRTNWAGVQLRDVLNAELEPFQVCGDERCRF
                     DGPDVELFPNAALTMALSFHELATNAAKYGALSHADGRLVVEWRLTNGDDSQKLHVTW
                     KEVDGPPVSEPLRKGFGSRLINRSMHALGGQAEFDFAPDGLRCALVLPLEASPLDHLI
                     PQGVHVHLSIRKTLSRTGS"
     gene            complement(1366..1821)
                     /locus_tag="VHN20_09945"
     CDS             complement(1366..1821)
                     /locus_tag="VHN20_09945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012321190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX2726129.1"
                     /translation="MADLKPILLVEDSPKDLELTLAALAKCQLANQIVVTRDGAEALD
                     YLFRRGDHQDRPAGNPAVVLLDLKLPKVDGLEVLEKLKRDPTTRNTPVVMLTSSREEQ
                     DVVRSYELGVNAFVVKPVGFQEFFEAVGDLGIFWAILNEPPPHSALMGR"
     gene            complement(1825..4053)
                     /locus_tag="VHN20_09950"
     CDS             complement(1825..4053)
                     /locus_tag="VHN20_09950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017482906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX2726130.1"
                     /translation="MVSVPGPGDLTACEQEPIHVPGSIQPHGFLFALDPRTRTITRVS
                     ANVRPVVGTDPERSLGRPLGEALPGAEAPWDELVPDVAERATTSFRTIALGGSDYHAF
                     VHRAGGELILELENATPGGRSLDALYPQMRAFIEELQSARVQETLAAVAARQVRRITG
                     FDRVLVYQFDSDWNGTVIAEDRNDRLPSYLDLRFPASDIPRQARELYRLNRLRLIPDA
                     AYRPVPILSSMAGAPPLDLSFSVLRSVSPIHVEYMRNMGTASSMSVSILVEGTLWGLI
                     SCHNMAPRHVSPAVRDACDLLAQILAVQIAAKQQTEEAAHRLELRSIQLQLLAHMATE
                     DRFIDGLTKNSDQLLRMAGAEGAAIIFGGECACIGRSPVEEDVRRMVEWLVAEGHEDL
                     FVTSSLAAVMPDAEALKDTASGVLAIAISKLRAGYVLWFRPEVVRTVKWGGDPRKPVD
                     PTPDGARLHPRKSFDLWKETVRLTSEPWRASEVETARDLRNAVVGIVLRKAEEVADLV
                     AELERSNKELESFSYSVSHDLRAPFRHIVGFAELLRESATDLTDTQRRYVDTIIESAF
                     SAGKLVDDLLSFSQMGRATLLPVPIEMNRLLQDVRRILAPDIEGRDIEWRIGELGSAC
                     ADPVMMRLAVQNLLSNAIKYTRGQKPAIIEVGRQPDADEAATVFFVRDNGVGFDMAYV
                     GKLFGVFQRLHRVEEFEGTGIGLANVQRIMERHGGRAWAEAVPNVGATFYFSLPRQAN
                     TR"
     gene            complement(4065..4628)
                     /locus_tag="VHN20_09955"
     CDS             complement(4065..4628)
                     /locus_tag="VHN20_09955"
                     /inference="COORDINATES: protein motif:HMM:NF013306.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biliverdin-producing heme oxygenase"
                     /protein_id="HEX2726131.1"
                     /translation="MLLERLRAETRLLHARIEDDLATMRAHESLDRHVVLLARFFGFY
                     QVWEPRLRACLADEAFFEPRRKLHLLEQDLAALGLAPEQIRVLPRCPRLPRLTSTAEA
                     MGSFYVLEGATLGGQVISRRLERSLGLSAGLGYSFFRSYGREVGPMWRAFGERLLATS
                     STATENACIRSAQSTFARLHLWLCRGA"
     gene            4785..5543
                     /locus_tag="VHN20_09960"
     CDS             4785..5543
                     /locus_tag="VHN20_09960"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033856 - pyridoxine 5'-phosphate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HEX2726132.1"
                     /translation="MKVPYLRLGVNIDHVATIRNARGGEHPDPVRAAHLATLAGADGI
                     TAHLREDRRHIRDDDIERLKREIMTPLNFEMAATSEMVAIASRVRPHAACLVPEKRTE
                     RTTEGGLDIIGEHSHLVPVVHELREAGIRVSLFVEPTIETMEAARSLEAPVVELHTGA
                     YSEAVLSDEDERVAHELERLGRAARHGSGLGLEIHAGHGLNFDNVGPVAAMPQIVELN
                     IGHHLVGEAVFSGLAEAIRTMRRAMDAGRARIPA"
     gene            5540..5938
                     /gene="acpS"
                     /locus_tag="VHN20_09965"
     CDS             5540..5938
                     /gene="acpS"
                     /locus_tag="VHN20_09965"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012336246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008897 - holo-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HEX2726133.1"
                     /translation="MILGIGSDLCDIRRIERSLARFGERFTHRIFTAGERARSDRRAA
                     RAASYARRFAAKEACAKALGTGMSAGVFWRDMEVVNLPNGRPTMRLTGGALERLQDMV
                     PPGHKATVHISLTDDPPVAQAFVVIEARRL"
     gene            6043..>6722
                     /gene="lepB"
                     /locus_tag="VHN20_09970"
     CDS             6043..>6722
                     /gene="lepB"
                     /locus_tag="VHN20_09970"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012336245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HEX2726134.1"
                     /translation="MDQARVEQKIKKEEHGLWETIKVIIQALLIAVVVRTLLFQPFNI
                     PSGSLVPTLLIGDYLFVSKYSYGYSKHSMPFSPPLFSGRIWGSEPKRGDIVVFKLPKD
                     NSTDYIKRVIGLPGDRIQVTGGVLQINGRAVKRERVEDYPTQDAFGRIIPVPQYKETL
                     PEGTEHLIVEKDGDRGYWDNTGVYTVPPGHYFMMGDNRDNSTDSRDESGVGFVPYENL
                     VGRAEIIF"
BASE COUNT         1125 a         2222 c         2297 g         1078 t
ORIGIN      
        1 acgtgttcgt acaaagccat gatgggccct tctcacgagt gagttgaagc tcgtcgcact
       61 ggtccagtgt gggagccgct ttcgcgtttc gatcggcgcc aagcccttcg agcctacagg
      121 cccgagcggt tgttcgaagg cggagacacg ggacgacggg tccgagaacc ctgcgctcgg
      181 gccgtccagg cgagcgccgt ccgttcagcc cccggccgga gcgaacgcga agagggcgac
      241 ataagggctt cgcggcgcaa aggcaagtgg cccccgcagg ccccgcgtca actgccggtg
      301 cggctgaggg tcttgcggat cgacaggtgg acgtggacgc cttgcgggat gaggtggtcc
      361 agggggctcg cctcgagcgg cagcacgagg gcgcagcgca ggccgtccgg ggcaaagtcg
      421 aactcggcct ggccgccgag ggcgtgcatg ctgcggttga taaggcggga gccgaagcct
      481 ttgcgcaggg gctcgctgac cggcggcccg tcgacttcct tccacgtcac gtgcagcttc
      541 tggctgtcgt cgccgttcgt caggcgccac tcgacgacga ggcgcccgtc ggcatgggac
      601 agggcgccgt atttggcggc attggtggcc agctcgtgga agctcagcgc catggtcagg
      661 gcggcattgg ggaacagctc gacatccggc ccgtcgaaac ggcacctttc gtcgccgcat
      721 acctggaacg gctccagttc cgcgttcagc acgtcgcgca gctggacgcc ggcccagttc
      781 gtgcgcgtga gcaggtcgtg ggtcttcccg agcgagacca ggcgcggcac gaagctgtcg
      841 ctgaaatcct ccagcgatcg tgcgtcgcgc agggtctgcg tggcgatcgc ctggatgatg
      901 gcgatggtgt tgttgacgcg gtggctgagc tcggcgacca gcacccgcaa atgcgcttcg
      961 gcctgctggc gctcggcctt ttcgcgcgcc tccgccagcg cgcgggtgat ggcggccggc
     1021 aggcgcacga ggcgctgctt gagcacgtag tcggtcacgc cgcgcttgaa cgagtcgatc
     1081 gcgatctcct cgccgagcgt cccggacacg aagatgaacg ggacctgcgg cgccttttcg
     1141 cgggccagct ccaaagccgc aaggccgtcg aaggacggca gcacgtagtc cgcgagaatc
     1201 aggtcgtgcg gatcggacag cgcccgcacg taatcctcgc gcgacgtgac gcgcgtgatg
     1261 gcgtgcggca gctcggcccg gcgcagatgg ccggcgatca gctccgcatc gaggtcgctg
     1321 tcttcaagga ggagaatccg aatcgtcacc tggccgttcc cgcgctcacc ggcccataag
     1381 cgcactgtgc ggaggcggct cgttgaggat ggcccagaag atgccgaggt cgccgacggc
     1441 ctcgaagaac tcctgaaagc cgaccggctt cacgacgaag gcgttgaccc cgagctcgta
     1501 gctgcgcacg acatcctgct cttcgcgcga cgaggtcagc atcacgacgg gggtgttgcg
     1561 tgtcgtcgga tcgcgcttga gcttttcgag cacctcgagg ccgtcgacct tcggcagctt
     1621 gagatcgagg agcacgaccg ccgggttgcc cgcaggacgg tcctggtggt ctccgcgccg
     1681 gaacaggtaa tccagggctt cggcaccgtc ccgggtcacg acgatctggt tggcgagctg
     1741 gcactttgcc agcgccgcca gcgtcagctc gaggtctttg ggactgtctt cgacaaggag
     1801 gatgggtttg aggtctgcca tggctcaccg tgtattcgct tggcgcggca gcgaaaagta
     1861 gaatgttgcg ccaacgttag gaaccgcttc cgcccaggcg cggccgccat gtcgctccat
     1921 gatccgctgc acgttggcca ggccgatgcc cgtgccctcg aattcctcca ccctgtggag
     1981 tcgctggaac accccgaaca gtttgccgac ataggccatg tcgaacccga cgccgttgtc
     2041 gcgcacgaag aacacggtcg cggcctcgtc ggcatccggc tggcggccga cctcgatgat
     2101 cgccggcttt tgcccgcgcg tgtatttgat cgcgttcgag agcaggtttt gcacggccag
     2161 cctcatcatg accgggtcgg cgcaggccga gcccagctcg ccgatgcgcc attcgatgtc
     2221 gcggccttcg atgtccgggg cgaggatgcg ccgcacgtcc tggagcagcc ggttcatctc
     2281 gatcggcacc ggcaggagcg tcgcccgccc catctgtgag aagctcagga gatcgtcgac
     2341 gagcttgccc gccgagaacg cggattcgat gatcgtgtcg acgtagcggc gctgcgtgtc
     2401 ggtaaggtcc gtcgccgact cgcgcagcag ctccgcaaag ccgacgatgt gccggaacgg
     2461 cgcgcgcagg tcgtgcgaga ccgaatacga gaaggattcc agctccttgt tgctccgctc
     2521 cagctcggcg acgagatccg cgacctcctc ggctttgcgc agcacgatgc ccacgacggc
     2581 gttgcgcagg tcgcgcgcgg tctccacctc gctggcgcgc cacggctccg acgtgagccg
     2641 cacggtctcc ttccacagat cgaaggattt gcgcggatgc aggcgggccc cgtcaggggt
     2701 cgggtcgacc ggcttgcgcg ggtccccgcc ccatttcacg gtgcgcacga cctccggccg
     2761 gaaccacagg acgtagcccg cgcggagctt ggatatggcg atggcgagga cgccgctggc
     2821 cgtgtccttg agagcctccg cgtccggcat gacggccgcc agcgaagagg tcacgaacag
     2881 atcctcgtgg ccttccgcga cgagccactc gaccatccgc cgcacgtctt cttcgacggg
     2941 gcttctgccg atgcaggcgc attccccgcc gaagatgatg gcggcgccct ccgctccggc
     3001 catgcgcagc aattgatcgg aattcttggt caggccgtcg atgaagcggt cctccgtggc
     3061 catgtgggcc aggagctgga gctggatgga gcgcagctcg agccggtgag cagcctcctc
     3121 cgtttgctgc ttcgcggcga tctgcaccgc caggatctgc gcgagcagat cgcaggcgtc
     3181 gcgcaccgcg ggcgagacgt ggcgcggcgc catgttgtgg cacgagatca ggccccacaa
     3241 cgtgccttcg accaggatcg acaccgacat cgacgatgcc gtgcccatgt tgcgcatgta
     3301 ttcgacgtga atgggcgaca cgctgcggag gaccgaaaag ctcaggtcga gcggcggcgc
     3361 gccggccatc gaggacagga tcggcaccgg ccggtaggct gcatccggaa tcagacgcag
     3421 ccggttcagg cgatagagct cgcgcgcctg gcgggggatg tcggacgcgg gaaagcgcag
     3481 gtcgagatag gagggcagcc ggtcgttgcg gtcttcggcg atgaccgtgc cgttccagtc
     3541 gctgtcgaac tgatagacga gcacccggtc gaagccggtg atccgccgga cctgccgggc
     3601 ggcgaccgcg gcaagcgtct cctgcacccg ggccgactgc aactcctcga tgaacgcccg
     3661 catttgcggg tagagggcgt cgagggaacg gccgccgggg gtggcattct ccagctcgag
     3721 gatcagttcc ccgcccgcgc gatgcacgaa ggcatgatag tcgctcccgc cgagggcgat
     3781 cgtccggaac gaggtggtgg ctcgctcggc aacgtccgga acaagctcgt cccacggcgc
     3841 ttcggcgccg ggcagcgcct cgcccagcgg ccggcccagc gagcgctcgg ggtccgtgcc
     3901 gacgaccggc cgcacattgg cgctgacccg ggtgatggtc cgggtcctgg ggtcgagggc
     3961 aaacaggaag ccgtgcggct ggatgctgcc aggaacgtgg atgggttcct gttcgcaggc
     4021 cgtcaggtct ccgggacccg gcactgagac catgggcggg ccccctacgc gccccggcac
     4081 agccacaggt gcagccgggc aaaggtggat tgggccgagc ggatgcaggc attctcggtc
     4141 gctgtcgagg acgtcgccag cagccgctcg ccgaaggctc gccacatcgg cccgacctcg
     4201 cgcccatagc tgcgaaagaa ggaatagcca agcccggcgg agaggccgag cgagcgttcc
     4261 aggcgccgtg agatcacctg gccccccagg gtcgcccctt ccaggacgta gaacgagccc
     4321 atcgcctcgg cggtgctggt caggcgcggc aggcgagggc accggggaag gaccctgatc
     4381 tgctccggag caaggccgag cgcggccagg tcctgctcga gcagatgcag cttgcgcctg
     4441 ggctcgaaaa acgcctcgtc ggccaggcac gccctgaggc ggggctccca cacctggtag
     4501 aacccgaaga agcgggccag cagcacgaca tggcggtcca gcgactcgtg cgcgcgcatg
     4561 gtcgccagat cgtcctcgat gcgcgcgtgc agcagccgcg tttccgcgcg cagacgttcc
     4621 agaagcatgc cgatcccgtg tggtggagag gtcaggcggg taaccagtct ggtaagaacg
     4681 ttctcgacgc ctgccggttc acgtgccatg ggagccatgc gtccgcggcc gctataaccc
     4741 tatatggagt gtggcgaaca gggcggccgg cccgggaaac cctgatgaaa gtcccgtatc
     4801 tgcgtctcgg cgtgaatatc gatcatgtgg cgaccatccg gaatgcccgc ggcggggagc
     4861 atcccgatcc cgtcagggcg gcgcacctcg ccacccttgc cggggccgac ggcataacgg
     4921 cgcatctgcg cgaggaccgg cggcatatcc gcgacgacga catcgagcgg ctcaaacgcg
     4981 agatcatgac gccgctcaat ttcgagatgg cggcgaccag cgagatggtc gccatcgcca
     5041 gccgcgtccg gcctcacgcc gcctgcctcg tgcccgagaa gcgcacggag cggaccaccg
     5101 agggcgggct cgacattatc ggcgagcatt cccatctcgt cccggttgtc cacgagctca
     5161 gggaggctgg aatccgcgtg tcgctgttcg tcgagccgac gatcgagacc atggaggcgg
     5221 cccgatccct cgaggctcct gtcgtcgagc ttcataccgg cgcctatagt gaagcagttc
     5281 tctccgacga ggacgagcgc gtcgcccatg agctcgagcg gctgggccgc gctgcccggc
     5341 atggcagcgg gctcggcctc gaaatccacg ccggccacgg cctcaacttc gacaatgtcg
     5401 gcccggtcgc ggcgatgccg cagatcgtgg agctcaatat cggccaccac cttgtcggcg
     5461 aggcggtctt cagcggcctt gccgaggcca tccgcaccat gcgtcgggcg atggacgcgg
     5521 gccgggcacg gatccctgca tgatcctggg catcgggtcc gatctctgcg acatccgccg
     5581 catcgagcgc tcgctcgcgc gcttcggcga acgcttcacg catcgcatct tcacggcggg
     5641 cgagcgggcg cgcagcgacc ggcgcgcagc ccgcgccgcc tcctacgcac gccgcttcgc
     5701 cgccaaggag gcctgcgcca aggccctcgg caccggcatg agcgcaggcg tgttctggcg
     5761 cgacatggag gtggtgaacc tgcccaacgg ccgcccgacc atgcggctca ccggcggcgc
     5821 gctggagcgg ctccaggaca tggttccgcc cggccacaag gccaccgttc acatctccct
     5881 gaccgacgac ccgccggtcg cccaggcttt cgtggtgatc gaggcacggc gattgtgact
     5941 gttcaaaagg tgatcgggcg tcgcattgcc gaggctcaca cattgggtta gacgcggcgc
     6001 gctgccaggg gcggatgcgc cggcaacaag gattctcgag acatggatca ggcccgcgtg
     6061 gagcagaaga tcaagaagga ggagcatggc ctctgggaaa ccatcaaggt catcatccag
     6121 gcgcttctga tcgccgtcgt cgtgcggacg ctgctgttcc agccgttcaa catcccgtcg
     6181 gggtcgctgg tgccgacgct gctgatcggc gactacctgt tcgtctcgaa atactcttac
     6241 ggctattcca agcattccat gccgttcagc ccgccgctct tctccggccg gatctgggga
     6301 tcggagccga agcgtggcga catcgtcgtg ttcaagctgc ccaaggacaa ttcaaccgac
     6361 tacatcaagc gggtgatcgg cctgcccggc gaccgcatcc aggtgaccgg cggcgtcctg
     6421 cagatcaatg gccgcgccgt gaagcgcgaa cgcgtcgagg attatccgac gcaggacgcc
     6481 ttcggccgca tcatcccggt gccgcaatac aaggaaacgc tgcccgaggg caccgagcac
     6541 ctgatcgtcg agaaggacgg cgaccgcggc tactgggaca acaccggcgt ctatacggtg
     6601 ccgcccggcc actatttcat gatgggtgac aatcgcgaca actcgaccga ctcgcgcgac
     6661 gagtcgggcg tcggattcgt gccttacgaa aatttggtcg gccgcgccga gatcatcttc
     6721 tt
//
LOCUS       DATAIQ010000601         5285 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_336780, whole genome shotgun sequence.
ACCESSION   DATAIQ010000601 DATAIQ010000000
VERSION     DATAIQ010000601.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 5285)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5285)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5285
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_336780"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..286
                     /locus_tag="VHN20_09975"
     CDS             <1..286
                     /locus_tag="VHN20_09975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726135.1"
                     /translation="NLLPAAGKAQKGDQRRGGGASPQGSSASGGQAGQAGQSGGQRGQ
                     SGQSGRGGETGNRGPGDQGRRPGGGGQSPMNTGSGQQGGPGGGGGAASGM"
     gene            454..1560
                     /locus_tag="VHN20_09980"
     CDS             454..1560
                     /locus_tag="VHN20_09980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018045928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase regulatory
                     subunit"
                     /protein_id="HEX2726136.1"
                     /translation="MTSGTNQASPLIALFEREGYARVEPPILQPTEPFIDLSGEDIRR
                     RMFVTQDADGRELCLRPDYTIPVCRQHLANGRTQAASYSYLGPVFRLRKDEPSEFQQA
                     GIESIGRSDRAAADAEILSLALEGLDRLGPSARAVKVGDMGLLDAVAEALRVGPATKR
                     RLMRAVVSGRPLDTVAEPDSASGLAEHAGLLAAIQGQDAKAVRGFVEDIIAIAGIARV
                     GGRSAGEIAERFLARAANRSGGLPEEARQVLSRYLAVTGDPDASANTIRALARDAGLD
                     VGRALDTFEERTGFMAARGVDISGFVFAADFARNLDYYTGFIFEIRDPRRSEVSLMVG
                     GGRYDRLLQHLGATDEIPAVGCSFWLDRIAGAMS"
     gene            1557..2531
                     /gene="hisG"
                     /locus_tag="VHN20_09985"
     CDS             1557..2531
                     /gene="hisG"
                     /locus_tag="VHN20_09985"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003879 - ATP phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HEX2726137.1"
                     /translation="MSDAPLVLAVPSKGRLQENAAAFFARAGLTFTQARGARDYRGAL
                     AEVPDVEVLFLSAAEIVTQLANGGAHLGITGEDLLREEIADAEAAVELLTPLGFGHAN
                     VVVAVPQAWIDVRTMADLDEVAVDLRTRHSRKMRVATKYVNLTRHFFADRGIADYRIV
                     ESLGATEGAPASGAAELIVDITTTGATLAANALKVLDDGVILRSEANLVASMRAPWSP
                     AARAAARAVMTRIAAEEAARTTREIRAGIDRQAADAAGLTQRYGAMLRASDAGELVLH
                     CPAREVFTVVDALLGAGARDVTVRTLDYVFRRTNPLSERLFTRLSPEG"
     gene            2600..3070
                     /locus_tag="VHN20_09990"
     CDS             2600..3070
                     /locus_tag="VHN20_09990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="META domain-containing protein"
                     /protein_id="HEX2726138.1"
                     /translation="MKSFRLVLVLAALASATSAGAQAQRQGAQQQNKQQQSNVPQSKR
                     DRQFPVPSSWVATSLNGKPFSGPDRPTLSLDQQYRAKGFGGCNTFSATMWPLREQRMA
                     TGPLALTKKKCDKAVMDSEHAFFVAVRTAGQWDFEGVILVIKSQSGELRLERSI"
     gene            complement(3126..5222)
                     /locus_tag="VHN20_09995"
     CDS             complement(3126..5222)
                     /locus_tag="VHN20_09995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018042550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein/permease"
                     /protein_id="HEX2726139.1"
                     /translation="MILLSVLTALAGLTLLAVRVSGAELPLYLPAVSLALAAIVFLAR
                     RIPRFLRVIVGTLAATHILLLALLIANALGAVPEGYRDYVPPASMPVGAMAFSALIYA
                     ASFVPVIRTIMEIADRYFEAREPSEVHIPLLGRFRASEGAIGTAFLAFLVGVNLAQVA
                     LNVRLSFFSRDWFNALQAKDAAAFWYQLLWIFAPLAAVYVAVAIIEIWVQYVLRIRWR
                     SFLNSMYVGEWLIDGVHYRMQLTGTEADNPDQRIAEDLRKYVDQTYTLSIGLLTQSAT
                     LVSFIAILWTLSRDLTLPGTDYPVPGLLVWFAILYAVIGTWLTHLIGKPLISLYFQQE
                     RYEADYRFALARLREYTEQVALLDGEKAEQQRLTGRFGGIVRNYMQIVSRQMKLTTFT
                     ASYFQANVVVPYVIAAPFYFAGKISLGQLQQTAGAFSRVEGALTFFISAYSTIADYKA
                     VIDRLVTFEASIARAQKMTAAEPRVHLVPGTAERLDLGNAEVDLPDGRKLVRLNNLSL
                     RPREATLLTGPSGSGKSTLFRAISGIWPFGNGEIRTPKDASMMLLPQRPYIPIGTLRD
                     AVTYPGVEGRYSDEAIAEALRLARLPHLVGRLDEERFWPQTLSLGEQQRLAIARALLA
                     QPDWLFLDEATAALDEPTEEAIYRMLREKLAGTTIVSIGHRSTLHAFHDRRIDMRPND
                     DGTFTADDARATAPAQ"
BASE COUNT          872 a         1777 c         1839 g          797 t
ORIGIN      
        1 aaacctgctt cccgccgcgg gcaaggccca gaaaggcgac cagcgccgcg gcggcggcgc
       61 gagcccgcag ggtagcagcg cgtcgggcgg gcaagcgggg caggcaggcc aatccggcgg
      121 tcagcgcggc caatcaggcc aatccggccg cggcggcgag acggggaacc gcggcccggg
      181 cgaccagggc aggcggcccg gaggcggcgg ccagtcgccg atgaataccg gatccggcca
      241 gcagggcggg ccgggcggcg gaggaggcgc tgcgagcggc atgtaacccg ccgttaaccg
      301 catttttcgg aggccgggcc ccgtgcccgg ccttttcgtt cgcgaccggc ccgaccggcc
      361 ttccggcatt ttgggctcat tcactgtttt gcttaaaagg catcgcgcct gagccccgcc
      421 gctgctagag acagcctcgg gaaagcacct ccgatgacct ccggcaccaa ccaggcgagc
      481 ccgctgatcg cgttgttcga acgcgagggc tacgcgcgcg tggagccccc catcctgcag
      541 ccgaccgagc cgttcatcga cctgtcgggc gaggacatcc ggcggcgcat gttcgtgacc
      601 caggacgcgg acgggcgcga gttgtgcctg cgtcccgact acaccattcc cgtctgccgg
      661 cagcacctcg ccaacggtcg gacgcaggcg gcgagctaca gctatctcgg cccggttttt
      721 cgcttgcgca aagacgaacc cagcgagttt cagcaagccg gcatcgagtc gatcggccgc
      781 tccgaccgtg ccgccgcgga cgcggaaatt ctgagcctcg ccctcgaggg gctcgaccgg
      841 ctcggcccgt cggccagggc cgtgaaagtc ggcgacatgg gtctccttga cgcggtcgcc
      901 gaagccctcc gcgtgggccc ggcgacgaag cggcgactga tgcgagccgt cgtctccggg
      961 cgccccctcg acaccgtcgc ggaaccggac agcgcgtccg ggctcgccga gcacgccggc
     1021 ctgctcgcgg cgatccaggg gcaggacgcc aaggcggtaa ggggcttcgt cgaagacatc
     1081 attgccatcg ccgggattgc ccgtgtcggc gggcgcagcg ccggcgagat cgccgagcgc
     1141 ttcctggcgc gcgcggccaa ccgttcgggc ggccttcccg aggaggcccg ccaggtgctg
     1201 agccgctatc ttgcggtgac gggcgacccg gatgcctccg ccaacaccat tcgtgccctg
     1261 gcccgcgacg ccggtctcga cgtcgggagg gccctcgata cgttcgagga gcgcaccggc
     1321 ttcatggcgg cgcgcggcgt cgacatttca ggcttcgtct ttgccgccga tttcgcgcgc
     1381 aacctcgact actacacagg cttcatcttc gagatccggg atccgcggcg cagcgaggtc
     1441 agccttatgg tcggtggagg ccgctacgat cgcctgcttc agcatctcgg cgcgactgat
     1501 gaaattccgg cggtcggctg ctcgttctgg ctcgaccgga tcgcgggagc gatgtcatga
     1561 gcgacgcccc gctggtcctc gccgtgccgt cgaagggccg tctgcaggag aacgcggcgg
     1621 cgttcttcgc ccgcgctggc ctgaccttca cgcaggcgcg cggcgcgcgc gattaccgcg
     1681 gcgcgctggc cgaggtgccg gacgtcgagg tgctgttcct gtcggccgcc gagatcgtca
     1741 cccagctggc caacggcggc gcccacctcg gcatcaccgg cgaggacctg ctgcgcgagg
     1801 agattgccga tgccgaggct gcggtcgaac tgctgacgcc gctcggcttc ggccatgcca
     1861 atgtggtcgt ggcggtgccg caggcctgga tcgacgtgcg cacgatggcg gaccttgatg
     1921 aggtcgcggt cgatctgcgc accaggcaca gccgcaagat gcgggtcgcc accaaatacg
     1981 tgaacctgac gcggcatttc ttcgccgacc gtggcatcgc cgactatcgc atcgtcgaga
     2041 gcctcggggc gaccgagggc gcgccagcat cgggcgcagc ggaactgatc gtcgacatca
     2101 ccaccaccgg cgcgacgctg gcggccaatg cgctcaaggt gctcgacgat ggcgttatcc
     2161 tgcgctcgga agccaatctg gtggcgtcca tgcgggcacc ctggagcccg gcggcgcgcg
     2221 ccgccgcgcg cgcggtcatg acccgcatcg ccgcggagga agcggcgcgc accacccgcg
     2281 aaatccgcgc cgggatcgat cggcaggccg ccgacgccgc cggcctgacg caacgctacg
     2341 gcgcgatgct gcgcgccagc gatgccggcg agttggtgct gcactgtccg gcgcgcgagg
     2401 tgttcacggt cgttgacgcc ctgctcgggg ccggcgcccg cgacgtgacg gtgcgcacgc
     2461 tcgactacgt gttccgccgg accaacccgc tttccgagcg cctgttcacg cgcctctctc
     2521 ctgagggtta gcaagcccgg gccgttgcct ccgcacgccc tcgcccttat ggtccggcga
     2581 ctctatccgg aggttctgaa tgaagtcgtt ccgcttggtt ctggtcctcg cggcgctcgc
     2641 ctcggcgacg tcagccggcg cccaggcgca acgccagggg gcgcagcagc agaacaagca
     2701 gcagcaaagc aacgtgccgc agtcgaagcg ggaccggcag ttcccggtgc cctcgtcctg
     2761 ggtcgcgacc agtctcaacg gcaagccgtt cagcgggccc gaccggccga ccttgtcgct
     2821 cgaccagcag tatcgcgcca agggcttcgg cggctgcaac acgttctcgg ccaccatgtg
     2881 gccgctgcgt gagcagcgga tggccaccgg tccgttggcg ctgaccaaga agaaatgcga
     2941 caaggccgtg atggattccg agcacgcgtt cttcgtcgcc gtgcgcaccg ccgggcagtg
     3001 ggacttcgag ggcgtgatcc tcgtgatcaa gagccagtcc ggcgagttgc gcctggaacg
     3061 ctcgatctaa tccgtcgcaa tctctaccac cccaaccctc tcccgcacgc gggagaggca
     3121 gatcgtcatt gcgcgggcgc cgtcgcgcgc gcgtcatcgg cggtgaaggt gccgtcgtcg
     3181 ttcggccgca tgtcgatgcg ccggtcgtgg aaggcgtgca aggtcgagcg gtgcccgatc
     3241 gacacgatgg tcgtccctgc gagcttctcg cgcagcatgc ggtagatcgc ttcctcggtc
     3301 ggctcgtcca gcgcggccgt cgcttcgtcg aggaagagcc aatccggctg agcgagcagg
     3361 gcccgtgcga tggcgagccg ttgctgctcg cccagcgaca gcgtctgcgg ccagaaacgc
     3421 tcctcgtcga ggcggccgac caggtgcggg aggcgcgcga gccgaagcgc ttcggcgatg
     3481 gcctcgtcgc tgtagcgtcc ctcgacgccg ggataggtca cggcgtcgcg aagggtgccg
     3541 atcgggatgt acggccgctg tggcagcagc atcatggacg catcctttgg cgtcctgatc
     3601 tcgccgttgc cgaacggcca gatgccggaa atcgcgcgga acagcgtcga cttgccggag
     3661 ccggacgggc cggtcagcag ggtcgcttcg cgcggccgca atgagagatt gttgaggcgc
     3721 accagcttgc ggccatccgg caggtcgacc tcggcattgc cgaggtccag ccgctccgcg
     3781 gtgccgggca cgagatggac gcgcggctcg gcggcggtca tcttctgggc gcgggcgatc
     3841 gacgcctcga acgtgaccag gcgatcgatg acggccttgt agtcggcgat cgtggaatag
     3901 gccgagatga agaaggtcag ggccccttcg acccggctga acgcgcccgc cgtctgctgc
     3961 agctgaccaa ggctgatctt gccggcgaaa tagaatggtg ccgcgatcac gtagggcacg
     4021 acgacgtttg cctggaaata gctcgccgtg aaggtcgtca gcttcatctg gcggctgacg
     4081 atctgcatgt agttgcgcac gatcccgccg aagcggcccg tgaggcgctg ctgctccgcc
     4141 ttctcgccgt cgagcagcgc cacctgctcg gtgtattcgc gcaaacgcgc cagggcgaag
     4201 cggtagtcgg cctcgtaacg ctcctgctgg aagtagaggc tgatgagcgg cttgccgatc
     4261 agatgcgtaa gccaggtgcc gatcaccgca tagaggattg cgaaccagac aagaaggcca
     4321 ggcaccgggt agtcggtccc cggcaaggtc aggtcgcgcg acagcgtcca caggatggca
     4381 atgaaggaca ccagggtcgc cgactgcgtc agcaggccga tcgagagcgt atacgtctgg
     4441 tcgacatatt tgcgcagatc ctcggcgatg cgctggtccg ggttgtccgc ctccgtgccg
     4501 gtcagctgca tgcggtaatg cacgccgtcg atcagccact cgcccacata catgctgttc
     4561 aggaagctgc gccagcggat gcgcaggacg tattgcaccc agatctcgat gatcgccacc
     4621 gcgacgtaga ccgcagcgag cggcgcgaat atccacagca gctgatacca gaacgcagcc
     4681 gcatccttgg cctgcagggc gttgaaccag tcgcgcgaga agaagctcag gcgcacgttc
     4741 agcgccacct gggccaggtt gacgccgacc aggaaggcca ggaatgccgt gccgattgcc
     4801 ccttcggaag cgcggaaacg gcccagcagg gggatgtgca cctcgctcgg ctcgcgcgcc
     4861 tcgaagtagc ggtcggcgat ctccatgatg gtgcggatca ccggcacgaa agaggcggca
     4921 tagatcagcg ccgagaacgc catcgcgccg accggcatcg aagcgggcgg cacgtaatcc
     4981 cggtagcctt cgggcacggc ccccagggca ttggcgatca acagagcgag gaggaggata
     5041 tgggtcgccg ccagcgtgcc gacgatgacg cgcaggaagc gcgggatacg gcgcgccagg
     5101 aagacgattg cggccagcgc cagggagacc gcgggcaaat agagcggcag ctcggcgccc
     5161 gaaacgcgca cggccagcaa ggtcaaaccg gccagggccg tcaggacgct gaggaggatc
     5221 ataggattcg cgctccgagc cggtctggtc gactcggcgg catcaataga gggaagtcgg
     5281 cccca
//
LOCUS       DATAIQ010000602         1649 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_308406, whole genome shotgun sequence.
ACCESSION   DATAIQ010000602 DATAIQ010000000
VERSION     DATAIQ010000602.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1649)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1649)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1649
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_308406"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..339)
                     /locus_tag="VHN20_10000"
     CDS             complement(<1..339)
                     /locus_tag="VHN20_10000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726140.1"
                     /translation="MRARLLWGTLYAKIGLVVVGLAVGAVLHVRLSAGPLSLQGLGGR
                     VASAVAAEIGPGWSVELNDTALELEDGALALRASGLDIRNPDGIVVLRAPYAIVGVEV
                     WSLLRANLQPR"
     gene            780..1244
                     /locus_tag="VHN20_10005"
     CDS             780..1244
                     /locus_tag="VHN20_10005"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012335512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008379 - thioredoxin peroxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HEX2726141.1"
                     /translation="MRLKAGDQAPQFTLPAVGGRDINLAGLRGRKVVLYFYPKDDTSG
                     CTREAQDFNALKQEFAAAGTEVIGLSPDSVRSHDKFRAKYDLDLTLVADEAKAVLEAY
                     GVWAEKSMYGRKYMGVERTTILVDGDGRIARIWEKVKVPGHAEEVLAAARAL"
     gene            1308..>1649
                     /locus_tag="VHN20_10010"
     CDS             1308..>1649
                     /locus_tag="VHN20_10010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726142.1"
                     /translation="MRAPPFITRLLRPRPCRLAARRATVLGAAAAFVLLAAWAAVTGW
                     YFLFQDDIATRMIARQSAMQQSYENKLADLRAQLDRAASQRLLEQNGLEGRLTELSAR
                     QSQLEIRQGILA"
BASE COUNT          301 a          556 c          531 g          261 t
ORIGIN      
        1 gcgcggctgc aggttggcgc gcagcagcga ccacacctcc accccgacga tcgcataggg
       61 cgcgcgaagc acgacgatcc catcggggtt gcggatgtcg agaccggacg cgcgcaacgc
      121 gagcgccccg tcctcgagct caagcgcggt gtcgttgagt tcgacgctcc agccggggcc
      181 gatctcggcc gcgacggcgc tcgccacccg gccgcccagc ccctgcaggc ttagcgggcc
      241 ggcgctcaac ctgacatgaa ggacagctcc gaccgccagc cccacgacca caaggccgat
      301 cttggcgtag agcgtccccc agagcagacg cgcccgcaag ctttgcggct gcttcggcgg
      361 ctttcttccg acgcgccctg gcgccgcccc gggggtcccc ctgatgcgct tcagcaggtg
      421 gatctttccg taacgaagcc catgcgacca gcgcgcgggc atgccgctgg gccggctgcc
      481 tcggacgggt gcgggcgggg cgctgaaaag atctgtgatg cgcctgttca ggcgaatcgc
      541 cgcgtgccgc gccctctgcc ataagcgggc gcgcaggcga tgccagtgcc cgctgagggc
      601 gggtccggcc gcggcgccga aaaattgttt cattggctcg aacagatcag caattctcgg
      661 caatagggac gcgcgactcg acagacggac aggctagccg gttgagccga tctcgggaaa
      721 caatccaaca ctcccgcaat atttgcaaag ccccgtcaat gggtcgaaag gaaggcaaaa
      781 tgagactaaa agcaggtgac caggcgcccc agttcactct tccggccgtc ggcggcaggg
      841 atatcaacct cgcgggcctc cgcggccgta aggtcgtgct ctatttctat cccaaggacg
      901 ataccagcgg ctgtaccaga gaagctcagg atttcaatgc cttgaagcaa gaattcgccg
      961 ccgccggcac cgaggttatc ggcctctccc ccgacagcgt gagaagccac gacaagttca
     1021 gggccaaata cgacctcgac ctgacccttg tcgccgacga ggcgaaggcc gtgctcgagg
     1081 cctatggggt ctgggccgag aaaagcatgt atggacgcaa atacatgggt gtcgagcgca
     1141 ccaccattct tgtcgacggg gacggccgca tcgcccgcat ctgggagaag gtgaaggtgc
     1201 ccggccatgc cgaggaggtg ctggcggccg ccagggctct ctgatggggc gcttcgggtt
     1261 tcgttaaccc taatcaagtc ttattggcgg cggaatcgac accgcccatg cgtgcccctc
     1321 ctttcatcac ccgcctgctt aggccacggc cctgccgtct cgctgcgcgc cgcgcgacgg
     1381 tgctcggcgc ggccgcggcc tttgtgctcc tggccgcgtg ggcggccgtg accggctggt
     1441 atttcctgtt ccaggatgac atcgcaaccc gcatgatcgc cagacagagc gccatgcagc
     1501 agagctatga gaacaagctc gccgacctgc gggcgcagct cgaccgcgct gccagccagc
     1561 gtcttctgga gcagaacggg ctggaaggcc ggctcacgga gctgagcgcc cgccagtcac
     1621 agctcgagat ccgccagggt atcctcgcg
//
LOCUS       DATAIQ010000603         2934 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_446480, whole genome shotgun sequence.
ACCESSION   DATAIQ010000603 DATAIQ010000000
VERSION     DATAIQ010000603.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2934)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2934)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2934
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_446480"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..447)
                     /locus_tag="VHN20_10015"
     CDS             complement(<1..447)
                     /locus_tag="VHN20_10015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726143.1"
                     /translation="MPTGITFATAAPPLQPAANRADVACFVGFVRRRSAPLPEAVRKE
                     LAAAGWVGGPWGRSEAELDTAMQLPIPVESWDGFDALFAWDERPLRASSGATCATYLG
                     AAVRSFFARGGHRAFIVRAGDPWPYLQDGRIDLRRERIRALIPAFAD"
     gene            complement(481..924)
                     /locus_tag="VHN20_10020"
     CDS             complement(481..924)
                     /locus_tag="VHN20_10020"
                     /inference="COORDINATES: protein motif:HMM:TIGR02241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HEX2726144.1"
                     /translation="MAERTTPYGAFNYVVSFDGGEIFGGFSDVSGIGSEIKIAEYRNG
                     NEKENHVRKVPGTHTVADTTLKRGIVNSKSLWDWIRDTRTSGPAAQKTVTITLFDEAQ
                     KPVESWVLRGVVPMKYTGPTLAGKGGGEVAMEEVVLSAQALELEV"
     gene            complement(950..2707)
                     /locus_tag="VHN20_10025"
     CDS             complement(950..2707)
                     /locus_tag="VHN20_10025"
                     /inference="COORDINATES: protein motif:HMM:NF016845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail sheath subtilisin-like
                     domain-containing protein"
                     /protein_id="HEX2726145.1"
                     /translation="MPEYLAPGVYVEETSFRAKSIEGVSTSTTAFVGPTRKGPFRVNL
                     DDSSTPELLTSYGDFERIYGSFADLSLGANTPRTNYLAHAARAFFNEGGARLYVARVV
                     GAGATPAGVVLTAPDGPEPARIGFTARFPGSAGNGRIIVREVVTPASRVVMDNAPAGS
                     VLRTGPNDALAHHVKVGSEWRPAANLGQAAANPATLAGGEPRVVSLTVTVRDADGNET
                     SYEDLGLERTHPRWVGYVLAAQPSRRADQLENLYAINLGADVTALALHTQFFQNVAPN
                     AQGMRVREIELTGGTDGGAPGIAAYALALGQIASLEDISIVAAPGSSAYPDAQAVTGA
                     LIAHAEARRAYRIAVLDTPPQQTPGQARTLRGQVDSRYAALYYPWVIVANPLARPGRE
                     DIPRELALPPSGFVSGVYARNDIDRGVHKAPANEVVRSALRFEIDVNFGQQEMLNPIG
                     VNCLRFLSGRGYRVWGARLTSSDPEWKYVSDRRYFIYLEASIDRGTQWAVFEPNGERL
                     WANVRQTISDFLYNEWSNGRLLGATQEEAFFVRCDRSTMTQNDLDNGRLVCLIGVAIL
                     KPAEFVIFRIGQKTADARA"
BASE COUNT          450 a          963 c         1049 g          472 t
ORIGIN      
        1 gtcggcgaag gcggggatca aagcgcggat gcgctcgcgc cgcaggtcga tgcggccgtc
       61 ctggagatag ggccaggggt cgcctgcgcg cacgatgaat gcgcggtggc cgccgcgcgc
      121 gaagaagctg cggacagcgg cgccaagata ggtcgcgcag gtcgcgccac tgctcgcgcg
      181 cagaggccgc tcgtcccagg cgaagagcgc atcgaacccg tcccagctct ccaccggaat
      241 aggcagctgc atggccgtat cgagctcagc ctcgctccgt ccccaagggc cgccgaccca
      301 gcccgcagcg gcgagctcct tgcgcaccgc ctccggcaag ggggcgctgc ggcgccggac
      361 gaagccgacg aagcaggcga cgtcggcgcg gttggctgcc ggctgaaggg gcggcgctgc
      421 ggtcgcgaag gtgatgccgg tcggcatggg ctcggcgtcc gttcggtgca ggtttcgggg
      481 tcagacctcg agctccagcg cctgcgccga gagcacgacc tcctccatcg cgacctcgcc
      541 gccgcctttg cccgcgagcg tcggcccggt gtatttcatc ggcacgacgc cgcgcaggac
      601 ccacgactcg accggcttct gggcctcgtc gaaaagggtg atcgtcaccg tcttctgcgc
      661 cgcagggccg ctcgtccgcg tgtcccggat ccagtcccac agcgacttcg agttgacgat
      721 gccacgtttc agcgtggtgt ccgcgacggt gtgggtgccg ggcaccttgc gaacgtggtt
      781 ctccttctcg ttgccgttgc ggtattcggc gatcttgatc tcggagccga tgcccgagac
      841 gtcggagaag ccgccgaaga tctcgccgcc gtcgaagctc acgacgtagt tgaaggcgcc
      901 atagggggtg gtgcgttcag ccatgactca tctccctaaa attcgcggct taggcgcggg
      961 catccgcggt cttctggccg atgcggaaga tcacgaactc ggcgggcttc aggatggcga
     1021 cgccgatcag gcagacgagc cgcccgttat cgagatcgtt ctgcgtcatc gtgctgcggt
     1081 cgcagcgcac gaagaaggct tcctcctgcg tggccccgag cagccggcca ttgctccact
     1141 cgttgtagag gaagtcggaa atggtctgac gcacgttggc ccacagccgc tcgccgttgg
     1201 gctcgaacac ggcccattgc gtgccacggt cgatcgacgc ttcgagatag atgaagtagc
     1261 gccgatccga gacgtatttc cattcgggat cgctcgaggt caggcgggcg ccccacacgc
     1321 ggtagccgcg gccgctgagg aagcgcaggc agttgacgcc aatcgggttc agcatttcct
     1381 gctgaccgaa attgacgtcg atctcgaagc gcaacgcgct gcgcacgacc tcgttggcag
     1441 gagccttgtg tacgccgcgg tcgatgtcgt tgcgtgcgta gacgccggag acgaaacctg
     1501 acggcggcaa cgcgagctcg cgcggaatgt cctcgcgtcc cggccgcgcg agcgggttgg
     1561 cgacgatgac ccatgggtag tagagcgcgg catagcgtga atcgacctgt ccgcgcagcg
     1621 tgcgcgcctg ccccggggtt tgctgcggcg gcgtgtcgag cacggcgatg cggtaggcgc
     1681 ggcgggcctc ggcatgggcg atcagggcac ccgtgaccgc ctgcgcgtcc ggataggcgg
     1741 aagagccggg cgcggccacg atcgagatgt cttcgaggct ggcgatctgt ccgagcgcca
     1801 gcgcgtaagc agcgataccg ggagcgccgc cgtcggtacc gccggtcagc tcgatctcgc
     1861 ggacgcgcat gccctgcgcg ttcggcgcga cgttctggaa gaattgcgtg tgcagcgcca
     1921 gggccgtgac gtcggctccg aggttgatgg cgtacagatt ctcgagctgg tcggcgcgac
     1981 gcgacggctg cgcggcaagg acgtagccga cccagcgcgg atgggtgcgc tccaacccga
     2041 gatcctcgta cgaggtttcg ttgccgtcgg cgtcgcgcac cgtgacggtg aggctgacca
     2101 cgcgcggctc gccgccggcg agagtggccg gattggccgc cgcctgtccg agattcgcgg
     2161 ccggccgcca ctcgctgccg accttgacgt gatgcgcgag cgcatcgttc ggccccgtcc
     2221 gaagcacgct gccggccgga gcattgtcca tgacgacgcg ggaggccggc gtgacaacct
     2281 cgcggacgat gatgcgcccg ttgccggcgc tgccgggaaa acgcgccgtg aagccgatcc
     2341 gggccggctc cggcccgtcc ggcgcggtca ggaccacgcc ggcgggggtt gcgccggcgc
     2401 cgaccacgcg cgcgacgtag aggcgtgcgc cgccctcgtt gaagaaggcg cgcgccgcat
     2461 gcgcgagata gttggtcctt ggcgtgttgg cgccgagcga gaggtcggcg aagctgccgt
     2521 agatgcgctc gaaatcaccg tagctggtga gcagctcggg ggtcgagctg tcatcaaggt
     2581 tgacccggaa cgggccctta cgggtggggc cgacaaaggc ggtcgtgctc gtgctgaccc
     2641 cttcgatcga tttggcgcgg aagctcgtct cttcgacata cacgcccgga gctagatatt
     2701 caggcatcgc acatctccta ttcgacgctc agcagtcggt tggccgccac cgccgctcaa
     2761 cccggcaggt ccaggttgac cgacagagcc agggattggc ctgtcgcgag acgcaccgcc
     2821 gcctgcgttc gggttgccgc aggattggct tcgatcgctg cgggatccgg tgccggagca
     2881 ccggccggtg cgtgcccggc agcgacctgt gccgccgggg tccgcaagcc gccg
//
LOCUS       DATAIQ010000604         1671 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_400908, whole genome shotgun sequence.
ACCESSION   DATAIQ010000604 DATAIQ010000000
VERSION     DATAIQ010000604.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1671)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1671)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1671
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_400908"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1177)
                     /locus_tag="VHN20_10030"
     CDS             complement(<1..1177)
                     /locus_tag="VHN20_10030"
                     /inference="COORDINATES: protein motif:HMM:NF017416.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEX2726146.1"
                     /translation="MAQNFLACDRDQELLLPPSLREWLPEGHLAWFVIDAVAALDLKP
                     FYAVYRDNGQGRAAHDPAMMVALLLYSYALGERSSRRIERRCVEDVATRVICANQRPD
                     HTTIARFRQRHESPLAELFGEVLALCADAGLVRVGVIAVDGTKVHANASERATRGYEA
                     IAREILEDAAAVDAEEDERFGEARGDELPGELATGQGRQRWLRDAKRRLDERRAREGK
                     PIPKSRPDRLKEAKRRLEEEHRVECRANEAYEDYRRHGRMKNGRRLGAHSPPKPYQPP
                     PVPQGKINVTDLDSRNVKTPRGWVQGYNAQAVIAAEVHVSSADFGQLEPMIAAARREL
                     ARAGIEQAPEVVLADAGYWHHVQMEHLAAEGVTVLVPPDANKRAGARPGWNGGLYAFM
                     "
     gene            complement(1325..>1671)
                     /locus_tag="VHN20_10035"
     CDS             complement(1325..>1671)
                     /locus_tag="VHN20_10035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006903146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEX2726147.1"
                     /translation="DAGYWHHVQMQRLTGDGVTVLIPPDAGKRASARPGWNGGLYAFM
                     RCVLATDQGGALYAKRQGMIEPVFADTKFNRRVDRFLRRGRAAARSEWRLTNAAHNLL
                     KLWRHTTAPTAA"
BASE COUNT          224 a          600 c          586 g          261 t
ORIGIN      
        1 gcatgaaggc atagagccca ccgttccagc ccggccgcgc gcccgcgcgc ttgttggcgt
       61 cgggcggaac gagcaccgtc actccctcgg cggccaggtg ctccatctgg acgtggtgcc
      121 agtagccggc gtcggcgagc accacctcgg gcgcctgctc gatgccggct cgcgcgagct
      181 cgcggcgcgc cgcggcgatc atcggttcga gctgcccgaa gtccgccgag gagacgtgca
      241 cctcggcggc gatgaccgcc tgggcgttgt agccctgcac ccagccgcgc ggcgtcttga
      301 cgttgcgcga gtccaggtca gtgacgttga tcttgccctg cggaaccggc ggcggctggt
      361 agggcttggg cgggctgtgc gcgccgagcc ggcggccgtt cttcatgcgc ccgtggcggc
      421 ggtagtcctc gtaggcctcg ttggcccgac actcgacccg gtgctcttct tccagacgac
      481 gtttggcctc cttgagccgg tccggccgtg acttcgggat cggcttgccc tcccgcgcgc
      541 gacgctcatc gaggcggcgc ttggcgtcgc gcagccagcg ctgtcggccc tgcccggtgg
      601 ccagctcacc gggcagctca tcgccgcgcg cctcgccgaa gcgctcgtcc tcctcggcgt
      661 cgacggccgc ggcgtcctcg aggatctccc gcgcgatcgc ctcgtagccg cgcgtcgcgc
      721 gctccgacgc attcgcgtgg accttggtgc cgtcgacggc gatcaccccg acccgaacca
      781 ggccggcgtc ggcgcacagc gccagcacct caccgaacag ctcagccaac ggcgactcgt
      841 ggcgctggcg gaagcgcgcg atcgtcgtgt gatccggccg ctgattggcg cagatcacgc
      901 gcgtggcgac gtcctcgacg cagcgccgct cgatccgccg cgacgaccgc tcgccgagcg
      961 cgtagctgta gagcaacagc gcgaccatca tcgccggatc gtgcgccgcc cggccctgcc
     1021 cgttgtcgcg atagaccgcg tagaacggct tcagatcgag cgccgcgacg gcgtcgatga
     1081 caaaccaggc gaggtgcccc tcgggcaacc actcacgcag gctcggcggc aacaacagct
     1141 cctgatcgcg atcacacgcg aggaagttct gcgccatccc gaaatcgtct taaccacccc
     1201 ggacggaccc ggctttgtgc aacagccacc atggaggctg ttgcgtaaag ggggctgcgc
     1261 gcctcatcgg gtgtgagctg tgcgcgggct tcgccggcgg cgggcagggg cgccgaccgc
     1321 cctttcaggc ggccgtgggc gctgtggtgt ggcgccagag cttgaggagg ttgtgcgccg
     1381 cgttggtgag ccgccattcc gagcgcgctg cggcccggcc ccggcgtaag aagcgatcga
     1441 cacggcggtt gaacttggtg tcggcgaaca ccggctcgat catgccttgg cgcttggcgt
     1501 agagcgcgcc gccctggtcg gtggccaaga cgcaccgcat gaacgcgtag agcccgccgt
     1561 tccagcccgg ccgcgcgctg gcgcgcttgc cggcgtccgg gggaatgagg accgtcactc
     1621 catcacccgt gaggcgttgc atctgcacgt ggtgccagta gccggcgtcg g
//
LOCUS       DATAIQ010000605         4795 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_60351, whole genome shotgun sequence.
ACCESSION   DATAIQ010000605 DATAIQ010000000
VERSION     DATAIQ010000605.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4795)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4795)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4795
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_60351"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(117..779)
                     /locus_tag="VHN20_10040"
     CDS             complement(117..779)
                     /locus_tag="VHN20_10040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0008097 - 5S rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25/general stress protein
                     Ctc"
                     /protein_id="HEX2726148.1"
                     /translation="MASVKELKAVARDRVGKGAARAVRRQGQVPAVIYGGGAAAEPIA
                     LDYNQMKQAIFAGHFLTTIFEIDVGGRKTRAIPRDYQLDPVRDFPIHIDFLRLAEGQR
                     IRVTVPVHVVGQETSPGVKRGGTVQIVEHSLSLEVPTEAIPEYVEVTVAELDIGGTIH
                     LSDVKLPEGARALGPEDMTIATVVVPTSVRDEVAAAAAAAATGAPAAETTPAATPEPA
                     KS"
     gene            complement(923..1486)
                     /locus_tag="VHN20_10045"
     CDS             complement(923..1486)
                     /locus_tag="VHN20_10045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014761232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:1990397 - queuosine salvage [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="VUT family protein"
                     /protein_id="HEX2726149.1"
                     /translation="MNTRDQRLAEGAVFLFLFALTIPAANWMIGHVGTVCPPQSPCLV
                     PVAPGLMAPSGVIMIGLALVLRDLVQRRLGVAAAVAAILLGAALSAFLAPPSIVLASA
                     AAFLLSELADLLVYTPLQRRRFVLAVVLSSLVGLVVDSAVFLQLAFGGLDFLPGQVIG
                     KAWMVLLAIPVVQWLRRRDQRLGLAPA"
     gene            1679..2650
                     /gene="corA"
                     /locus_tag="VHN20_10050"
     CDS             1679..2650
                     /gene="corA"
                     /locus_tag="VHN20_10050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003615007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015087 - cobalt ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0015095 - magnesium ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006824 - cobalt ion transport [Evidence
                     IEA];
                     GO_process: GO:0015693 - magnesium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium/cobalt transporter CorA"
                     /protein_id="HEX2726150.1"
                     /translation="MGMVIDCALYEGGRRVATIDLDEAAPPEPGSGRFVWIGLHEPDQ
                     ELLRKVQRRFGLHDLAVEDAHRAHQRPKLEVYGESLFVVVRTVQLQGRTVAFGETHIF
                     AGRGYVVTVRHGSSTAYKEVRARCEHSPKMLQKGEDFVIYSVMDFVVDNYFPVLHELE
                     IEIDEIEAAVFARSSGRIDIQRIYELRHDLLLMRRAIQPLQEVCSRIMRFDVPMIDAD
                     MHPYFRDVQDHIIRVVETIDNLRELLNAALEANLLLASIQQNDVTKKLAAGAAILAVP
                     TAIAGIYGMNFDYMPELKHPLGYPLILLAIFGLSGFLFLRFRRAGWL"
     gene            complement(2845..3777)
                     /locus_tag="VHN20_10055"
     CDS             complement(2845..3777)
                     /locus_tag="VHN20_10055"
                     /EC_number="2.7.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004749 - ribose phosphate diphosphokinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0006015 - 5-phosphoribose 1-diphosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009156 - ribonucleoside monophosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009165 - nucleotide biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HEX2726151.1"
                     /translation="MKLVAGNSNRPLAEAIADYLKVPLARASVRRFADMEIFVEILEN
                     VRGEDVFVLQSTSFPANDHLMELLIMIDALRRASARRITAVIPYFGYARQDRKTAART
                     PISAKLVANLITHAGVDRVLTVDLHAGQIQGFFDIPTDNLFGAPVMVRDVKDRMNATD
                     KIVVSPDVGGVVRARALAKRIDAPLAIVDKRRERAGESEVMNIIGEVEGRSCILVDDI
                     VDSGGTLCNAAEALLAEGAKDVYAYITHGVLSGGAVSRIANSKLKELVITDSIQPTEA
                     VKVARNIRVITIAPLMGEAISRTAAEASVSSLFD"
     gene            4012..>4795
                     /locus_tag="VHN20_10060"
     CDS             4012..>4795
                     /locus_tag="VHN20_10060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020090646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HEX2726152.1"
                     /translation="MNRKANTDVPPDLLDDLGEGEDVEAVGEAASDVELDLEVSPGSV
                     KAGVAVIRRFWETLPNSPGVYRMIDAKGDVLYVGKARNLKARVGSYTRGQGHTNRIAR
                     MIAETGAMEFVTTATEIEALLLEVNLIKQLKPRYNVQLRDDKSLPFILITGDHAAPQI
                     VKHRGARNRKGEYFGPFASVWAVNRTVNALQRAFLLRTCNDSYYENRTRPCLLHQIKR
                     CSGPCTGEIGLGEYAKLAGEARAFLAGKSNAVKDQLAAEMQAA"
BASE COUNT          804 a         1632 c         1609 g          750 t
ORIGIN      
        1 gaaatgcccc cgtcacccta gctcgctgac gcttcgcttg cttcggccac gacaaggtgg
       61 ccgaagccct ctccccgcaa gcggggagag gagatcagcg ctgcgccgca ggctcgtcag
      121 ctcttggccg gctcgggcgt ggcggccggc gtcgtctccg cggccggggc gcccgtggca
      181 gcggccgcgg cggctgccgc cacctcgtcg cgcacgctcg tcggcaccac caccgtggcg
      241 atggtcatgt cttccgggcc gagcgcgcgc gcgccctccg gcagcttcac gtccgacagg
      301 tggatcgtgc cgccgatgtc gagctcggcg accgtgacct cgacatattc ggggatcgcc
      361 tcggtcggga cctcgagcga aaggctgtgc tcgacgatct gcaccgtgcc gccgcgcttg
      421 acgcccggcg aggtctcctg gccgaccacg tgcaccggca ccgtgaccct gatgcgctgg
      481 ccttcggcga ggcgcaggaa gtcgatgtgg atcgggaaat cccggaccgg gtcgagctgg
      541 tagtcgcgcg ggatggcgcg ggtcttgcgg ccgccgacat cgatctcgaa gatcgtcgtc
      601 aggaagtggc cggcgaagat cgcctgcttc atctgattgt agtcgagcgc gatcggctcg
      661 gctgcggcgc cgcctccata gatgacggcg ggaacctggc cctggcgacg aacggcccgg
      721 gcagccccct tgccgacccg gtcgcgtgcc acggccttga gctcttttac agaagccatg
      781 gtcgtgtcct tcttcagctg tgagaaaacc gaaagccgcc cagggcggct tcatcggctg
      841 gcgtccgtgc ctccaagggt gcgggcggac gcgggccggc gtatagccca aagcgcccgg
      901 agaggcaaac cggcccgggc ggtcaggccg gcgccagccc cagccgctgg tcgcgccggc
      961 gcagccactg cacgaccggg atggcgagca gcaccatcca cgccttgccg atgacctggc
     1021 cgggcaggaa atccaggccg ccgaaggcga gctggaggaa gacggcgctg tcgacgacca
     1081 gcccgacgag gctcgacagc acgaccgcca ggacgaaccg gcgtcgctgc agaggggtgt
     1141 agacgaggag gtcggcgagc tcggacagca ggaacgccgc cgcggacgcg aggacgatgc
     1201 tcggcggagc caggaaggcc gacagggccg cccccagcag gatggcggcc accgccgccg
     1261 cgacgcccag ccgccgctgc acgaggtcgc gcaggaccag ggccaggccg atcatgatca
     1321 ccccgctcgg cgccatcaag ccgggggcca ccggcacgag gcaggggctc tgcggcgggc
     1381 acaccgtgcc cacgtgaccg atcatccagt tggcggcggg gatggtcagc gcgaacagga
     1441 agaggaagac ggccccttcc gcaaggcgct ggtctcgggt gttcatcgtg tccttcgtga
     1501 cttgcatggg gcggctggga aaggcccggc aacggtatat cctagggcgg atcgcttcgg
     1561 atgaatgaag ccgctttgaa tcctttgaat cgcatcatct ttttcggcgc gatggtgtcc
     1621 acttcgccgg atcatgctgt agctattcgc tcgaccgcgg gatgaccagg ggcagggcat
     1681 gggaatggtg atcgattgcg ccctctacga gggcgggcgg cgcgtcgcaa ccatcgatct
     1741 cgacgaggcg gcgccgcccg agccgggcag cgggcgcttc gtctggatcg gcttgcacga
     1801 accggaccag gagctgttgc gcaaggtcca gcgccgcttc ggcctgcatg acctcgccgt
     1861 cgaggacgcg caccgcgccc atcagcggcc gaagctcgag gtctatggcg agtcgctgtt
     1921 cgtcgtggtc cgcaccgtgc agctgcaggg gcggacggtc gccttcgggg aaacccacat
     1981 cttcgccggc cgcggctacg tcgtcaccgt gcggcacggc tcgtcgaccg cctacaagga
     2041 ggtgcgggcg cgctgcgagc acagtcccaa gatgctgcag aagggcgagg acttcgtgat
     2101 ctactcggtc atggatttcg tggtcgacaa ttactttccc gtcctgcacg agctcgaaat
     2161 cgagatcgac gagatcgagg ccgccgtctt cgcgcgctcc tcaggccgca tcgacatcca
     2221 gcgcatctac gaattgcgcc acgacctcct gctcatgcgc cgcgccatcc agccgctgca
     2281 ggaggtgtgc agccgcatca tgcgcttcga cgtgccgatg atcgatgccg acatgcaccc
     2341 ctacttccgc gacgtgcagg accacatcat tcgcgtcgtc gagaccatcg acaatctgcg
     2401 cgagctgctc aacgccgcgc tcgaggccaa cctgctcctc gcctcgatcc agcagaacga
     2461 cgtcaccaag aagctggccg ccggggccgc gatcctggcc gtgcccacgg ccatcgccgg
     2521 catctacggc atgaatttcg actacatgcc cgagctcaag cacccgctcg gctatccgtt
     2581 gatcctgctc gcgatcttcg gcctgtccgg cttcctgttc ctgcgcttca gacgggcagg
     2641 gtggctgtaa ttttcccctc ccccttgcgg ggaggggacg actcggacgc gcagcgtccg
     2701 agcgagggcg ggggtgggtc agcttgggta agcgcgagaa gaatgatgcc tgcggatccg
     2761 ggtgaggaat gccacgtacc cgtccgctcc gactctccga cccccacccc ttaaccctcc
     2821 ccgcaagggg gaggggaata tgtgctagtc gaacaggctc gacacgctcg cttccgcggc
     2881 cgtccggctg atcgcctcgc ccatcagcgg cgcgatggtg atgacgcgga tgttgcgggc
     2941 gaccttcacg gcctcggtcg gctggatcga atcggtgatc accagctcct tgagcttgga
     3001 gttggcgatg cgcgacacgg ctccgcccga cagcacgccg tgcgtgatgt aggcgtagac
     3061 atccttggcg ccctcggcga gcagcgcctc cgcggcgttg cacagcgtgc cgcccgaatc
     3121 gacgatgtcg tcgaccagga tgcaggagcg cccctcgacc tcgccgatga tgttcatcac
     3181 ctccgattcg ccggcgcgct cgcggcgctt gtcgacgatc gccagcggcg catcgatgcg
     3241 cttcgccagc gcccgggcgc gcacgacgcc gccgacgtcc ggcgacacga cgatcttgtc
     3301 ggtcgcgttc atgcggtcct tgacgtcgcg caccatcacc ggcgcgccga acaggttgtc
     3361 ggtcgggatg tcgaagaagc cctggatctg gccggcatga aggtcgaccg tcagaacccg
     3421 gtcgacgccc gcatgggtga tcaggttggc gaccagcttg gccgagatcg gcgtgcgcgc
     3481 cgccgtcttg cggtcctgac gggcatagcc gaaatacgga atcaccgctg tgatgcggcg
     3541 cgccgaggcg cggcgcagcg cgtcgatcat gatcaggagt tccatcagat gatcgttggc
     3601 gggaaacgac gtcgactgca ggacgaacac gtcctcgccg cgcacgttct ccaggatctc
     3661 gacgaagatc tccatgtcgg cgaagcgccg gaccgaggcg cgggcgagcg gcaccttcag
     3721 atagtccgcg atggcctcgg caaggggtcg gttggagttt cccgcgacga gcttcatgaa
     3781 ggctttctgc tgcgccgggc catcccggaa cggacggccg tgccggcttc tgaactggcg
     3841 cgaggctctt agcagcgttg gaaaaccgtc acaatacggc ccgtgccccc gtcgttaaca
     3901 tctggtcaga atccccacgc ggcgaccggc agagggaagt cggctgccga tccggagctg
     3961 cgaccccggg ccaggcttcc gcgacccgac ccgcggccct aaatgaagcc catgaatcgc
     4021 aaggcaaata ccgacgtccc gccggacctc ctcgacgatc tcggcgaggg cgaggacgtc
     4081 gaggccgtcg gcgaagccgc ctccgacgtc gagctcgacc tcgaggtctc gccgggctcg
     4141 gtcaaggccg gcgtcgccgt catccggcgc ttctgggaga cccttccgaa ctcgcccggc
     4201 gtctaccgca tgatcgacgc caagggcgac gtcctctacg tcggcaaggc gcgcaacctc
     4261 aaggcgcgag tcggctcata tacccgaggc caggggcata ccaaccgcat cgcgcgcatg
     4321 atcgccgaga ccggcgcgat ggagttcgtc accaccgcga cggagatcga ggcgctgctg
     4381 ctcgaggtca acctcatcaa gcagctgaag ccgcgctaca atgtgcagct gcgggacgac
     4441 aagtcgcttc ccttcatctt gatcaccggc gaccacgcgg cgccgcagat cgtcaagcac
     4501 cgcggcgcgc gcaaccgcaa gggcgagtat ttcgggccgt tcgcgagcgt ctgggccgtg
     4561 aaccgcacgg tcaacgccct gcagcgcgcg ttcctgctgc gcacctgcaa cgacagctat
     4621 tacgagaacc gcacgcggcc gtgcctgctg caccagatca agcgctgctc ggggccgtgc
     4681 acgggcgaga tcggcctcgg cgaatatgcc aagcttgccg gagaagcgcg cgccttcctg
     4741 gcgggcaagt cgaacgccgt gaaggatcag ctcgcggccg agatgcaggc ggctt
//
LOCUS       DATAIQ010000606         1642 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_124476, whole genome shotgun sequence.
ACCESSION   DATAIQ010000606 DATAIQ010000000
VERSION     DATAIQ010000606.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1642)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1642)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1642
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_124476"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            348..1142
                     /locus_tag="VHN20_10065"
     CDS             348..1142
                     /locus_tag="VHN20_10065"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HEX2726153.1"
                     /translation="MGTVKALVAASLIAAGSVLPAVAADMLMPPLRGYQAVQPGVVEI
                     GTGWYIRGDIGYTDYKRPRDGLFGVAGTPFDSIKLDPTWSAGGGFGYKFLTWLRADLT
                     ADYRFESDFEANSAQPGFTRRDRSNFDSTTILVNGYVDLGTWYGITPYAGAGAGVAFN
                     KFKDYQVQVTCVTTACGGPTPGAFAIGPLPAVTLGGEEELKTSFAWALMGGVAVDMGG
                     GFQIDAGYRYVNLGEVRSNADSAGAVSRVKELDAHEVRLGFRYMID"
     gene            complement(1224..>1642)
                     /locus_tag="VHN20_10070"
     CDS             complement(1224..>1642)
                     /locus_tag="VHN20_10070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX2726154.1"
                     /translation="LNIYSQIGMILLVGLMTKNGILIVEFANQLRDRGLKTRDAVIES
                     SVQRLRPILMTSIATMGGAIPLAWSVGAGAEARNAIGWVIVGGVALSTLLTTLVVPSL
                     YLLIGGYSRPANYTANLLDRMREEEEATGHVIEPAE"
BASE COUNT          271 a          539 c          537 g          295 t
ORIGIN      
        1 cctgcgctgg atgctggcca ccccggttgc ggtggcgccg gtcgtccgca aatactgatc
       61 tcggatcata cgatccgcac cgacggcgcg aggcattgcc tcgcgccgtt ttcgtttgca
      121 gcggctgcag cccgccgccg cacagccgtc cggcctagcg atgttgcgcg ctcgccgatc
      181 cgcatgttcg cgtgcgaaca actcctgcac cccttcgtgt gcagcacgcg tcatggttaa
      241 gcggcactta acctgtttgc cgcatcgtcc atgcactggc gtttcgcgtg tcgtgcatgg
      301 tccggcggag acatgtcggg ccggttccat cgaataaagg acctgtcatg ggaaccgtca
      361 aagccctcgt cgctgcaagc ctgatcgccg ccggctctgt cctgccggca gtggccgccg
      421 acatgctgat gccaccgctg cgcggctacc aggcggtgca gcccggcgtc gtggagatcg
      481 ggaccggctg gtacatccgc ggcgacatcg gctacacgga ttacaagaga ccccgtgacg
      541 gcttgttcgg cgtggcgggc accccattcg attcgatcaa gctcgacccg acctggtcgg
      601 ccggcggcgg cttcggctac aagttcctca cctggttgcg cgcagacctg accgcagatt
      661 atcgcttcga atcggacttc gaagcgaaca gcgcgcagcc cgggttcacg cggcgcgatc
      721 gctccaactt cgattcgacg accattctcg tcaacggcta tgtcgatctc ggcacgtggt
      781 acggcatcac gccgtatgcg ggcgccggtg ccggcgtcgc cttcaacaag ttcaaggatt
      841 accaggtgca ggtcacgtgc gtgacgaccg catgcggcgg tcccacgccg ggcgctttcg
      901 ccatcggacc gctgccggcc gtgaccttgg ggggcgagga ggaactcaag accagcttcg
      961 cctgggcgct gatgggaggc gtcgccgtcg atatgggcgg cggcttccag atcgacgcgg
     1021 gctaccgcta cgtcaatctc ggcgaggtgc gcagcaatgc ggactccgcc ggcgcagtct
     1081 cacgcgtcaa ggaactggac gcacacgagg tgcggctcgg cttccgctac atgatcgact
     1141 gatcagtcct cgcggatcac gagaagcgag aacgcgacag attgcgcctg ctattgccga
     1201 cttgcctacc gccttgattc acctcactcg gcaggctcga tcacgtggcc tgtggcctcc
     1261 tcttcctcgc gcatgcggtc gagcaggttg gcggtatagt tggccgggcg cgaatagccg
     1321 ccgatcaaga gatacagcga cggcaccacg agggtggtga gcagcgtcga gagcgccacg
     1381 ccgccgacga tcacccagcc gatggcgttg cgcgcctccg cgccggcgcc gaccgaccag
     1441 gcgagcggga tggcgccgcc catggtggcg atcgaggtca tcaggatcgg gcgcaggcgc
     1501 tgcaccgagg attcgatcac cgcgtcgcgg gtcttgaggc cgcggtcgcg cagctggttc
     1561 gcgaactcga cgatgaggat gccgttcttg gtcatcagcc cgacgagcag gatcatgccg
     1621 atctgcgagt agatgttgag cg
//
LOCUS       DATAIQ010000607         2007 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_60447, whole genome shotgun sequence.
ACCESSION   DATAIQ010000607 DATAIQ010000000
VERSION     DATAIQ010000607.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2007)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2007)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2007
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_60447"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..926)
                     /gene="gltX"
                     /locus_tag="VHN20_10075"
     CDS             complement(<1..926)
                     /gene="gltX"
                     /locus_tag="VHN20_10075"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009332 - glutamate-tRNA ligase complex
                     [Evidence IEA];
                     GO_function: GO:0004818 - glutamate-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HEX2726155.1"
                     /translation="MAQTVVTRFAPSPTGFLHIGGARTALFNWLYARRHGGKMLLRIE
                     DTDRERSTDAAIQAILDGLSWLGLEWDGDVVYQYSRAERHREVARTLLATGRAYQCYA
                     SPTELEQMRETARREGRPMRYDGRWRDRDPGDAPPGVRPVIRLRAPIEGETVVEDHVQ
                     GRVVWQNKDLDDLVLLRSDGNPTYMLAVVVDDHDMGVTHIIRGDDHLTNAARQKQIYD
                     ALGWSVPEMAHIPLIHGPDGAKLSKRHGALGIEAYRTMGYLPAALRNYLVRLGWSHGD
                     QEVFSTDEMIEAFDLGQIGRSPARFDFAKLENL"
     gene            1024..>2007
                     /locus_tag="VHN20_10080"
     CDS             1024..>2007
                     /locus_tag="VHN20_10080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012330626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0030420 - establishment of competence for
                     transformation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ComEC/Rec2 family competence protein"
                     /protein_id="HEX2726156.1"
                     /translation="MADQGGRGPRSAARAAALPPLAALLVGPLAAGDWRRWLWRCLEQ
                     ELEHRRLFPWLAVAFGVGILLFFAAEDRPALWAPVAGAALAASVAVAMRARLAFFAAA
                     VGIAAVFLGFTAGVTRMRGVGAPVLGRITISQLSGFVESVEERAEGARLVVRLHDLAA
                     APAESRPRRARVTMRDRQNLRAGDFITGTARLLPPPEAARPGGYDFARDAYFRSIGAV
                     GSLVGRVEAKPPPVAPDLSLRLAAAIDDARNALTRRIADAIGGQAGAVAAALVTGKRG
                     LISEDTNDALRAAGIYHIVSISGLHMVLAAGTMFWLARALLALVPALALLWP"
BASE COUNT          265 a          717 c          708 g          317 t
ORIGIN      
        1 aggttctcga gcttggcgaa atcgaagcgc gccggcgagc ggccgatctg cccgaggtcg
       61 aatgcctcga tcatctcgtc cgttgagaac acttcctggt cgccatggct ccagccgagg
      121 cgcacgaggt agttgcgcaa ggcggccggc agataaccca tggtgcgata ggcctcgatg
      181 ccaagtgcgc catggcgctt cgacagcttg gcgccgtccg gcccgtggat cagcgggata
      241 tgcgccatct ccggcaccga ccagccgagc gcgtcgtaga tctgcttctg gcgggccgcg
      301 ttggtgagat ggtcgtcgcc gcggatgatg tgcgtgacgc ccatgtcgtg gtcgtcgacc
      361 accacggcga gcatgtaggt cgggttgccg tccgagcgca gcaggacgag gtcgtccagg
      421 tccttgttct gccagaccac gcggccctgg acatggtcct cgacgaccgt ttcgccctcg
      481 ataggcgcgc gcagccggat gaccggcctg acccccggcg gcgcatcgcc ggggtcgcgg
      541 tcgcgccagc gcccgtcgta gcgcatgggc cggccctcgc gccgcgccgt ctcgcgcatc
      601 tgttccaact cggtgggcga ggcgtagcac tggtaggcgc ggcctgtggc gagcagagtg
      661 cgcgcgacct cgcgatgccg ttcggcgcgc gaatactggt agacgacgtc gccgtcccac
      721 tcgagcccga gccagctcag cccgtcgagg atggcctgga tggccgcgtc ggtcgagcgc
      781 tcgcggtcgg tgtcctcgat gcgcaacagc atcttgccgc catggcggcg ggcatagagc
      841 cagttgaata acgccgtgcg cgccccgccg atatgcagga aaccggtcgg ggagggggcg
      901 aagcgggtaa cgacagtttg agccatggca ctcggcaaaa cgggatgacg tgatctaggc
      961 accacggcgc ctcgcgtcta ccctgcaaat ggacgcgcag caggccaggg aacaggccaa
     1021 gccatggccg accagggcgg gagaggaccg cgatcggcgg ctcgcgcggc ggcactgccg
     1081 ccgctcgccg ctctcctcgt cggcccgctt gcagccggcg actggcgccg ctggctgtgg
     1141 cgctgcctcg agcaggaact cgagcaccgc cggctgttcc cctggctcgc cgtcgccttc
     1201 ggcgtcggca tcctgctgtt cttcgccgcc gaggaccggc ccgctttatg ggccccggtc
     1261 gcgggcgccg ctctcgcggc gtcggtcgcc gtcgcaatgc gggcgcggct cgcgttcttt
     1321 gctgccgcgg tcggcatcgc cgccgtgttc ctcgggttca cggccggcgt cacacgcatg
     1381 cgcggcgtcg gggcgccggt gctcgggcgc atcacgatct cgcagctgtc cggcttcgtc
     1441 gagagtgtcg aggaacgcgc cgagggcgcc cgtcttgtcg tgcgcctgca cgacctcgcg
     1501 gccgctcccg ctgaaagccg gccccggcgc gcgcgcgtga ccatgcgcga ccgccagaac
     1561 ctcagggccg gcgatttcat caccggcacg gcccgcctgc tgccgccgcc cgaggcggcg
     1621 cgcccgggcg gctacgattt cgcgcgcgac gcctattttc gcagtatcgg cgcggtcggc
     1681 tccctggtcg ggcgtgtcga ggcaaaaccg ccacccgtcg cacccgacct gtccctgcgc
     1741 ctggccgccg ccattgacga cgcgcgcaat gccctgaccc gccgcatcgc cgatgccatc
     1801 ggcggccagg cgggcgcggt cgcagcggcc ctcgtcaccg gcaagcgcgg gctgatcagc
     1861 gaagacacca atgacgcgct gcgcgccgcg ggcatctacc acatcgtgtc gatctcgggc
     1921 ctgcacatgg ttctggcggc cgggaccatg ttctggctgg cgcgggcgct gctcgcgctg
     1981 gtcccggccc tggccctgct gtggccg
//
LOCUS       DATAIQ010000608         2175 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_31545, whole genome shotgun sequence.
ACCESSION   DATAIQ010000608 DATAIQ010000000
VERSION     DATAIQ010000608.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2175)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2175)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2175
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_31545"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..187
                     /locus_tag="VHN20_10085"
     CDS             <1..187
                     /locus_tag="VHN20_10085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015932680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726157.1"
                     /translation="HPIARGQVVVTGTRIAIEITEIIRKPEVLRGPGTCIGASAIAAQ
                     AAAEPAETAETAEPEPA"
     gene            271..355
                     /locus_tag="VHN20_10090"
     tRNA            271..355
                     /locus_tag="VHN20_10090"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:305..307,aa:Leu,seq:gag)
     gene            895..1266
                     /locus_tag="VHN20_10095"
     CDS             895..1266
                     /locus_tag="VHN20_10095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726158.1"
                     /translation="MNLDQKLLVCEAMLARLDAACASAEAEVKHADALGQHIRRLLGN
                     LEAEQARLDDKIREVTSEQNGLDPPRQDEPLADMEHMMSRLRGVQARLTRLVQPREAA
                     LYLLPGQPAWGEDASTFGGGF"
     gene            complement(1243..1743)
                     /locus_tag="VHN20_10100"
     CDS             complement(1243..1743)
                     /locus_tag="VHN20_10100"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF025054.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX2726159.1"
                     /translation="MLTIRDVVPADIAAVRSLLITTWHATYDPILGRDKVTDITGSWH
                     APGTLGRQIGEQGTAFLLAERDGEVIATSYALGGGEAVMLRRLYVLPAEQGRGIGAAL
                     LARTLDRFPAARRIILEVERGNAPAIRFYERNGFTQVRLSGCCGDRSDIQAIVMEKRL
                     EPPAES"
     gene            complement(1748..>2175)
                     /gene="gatB"
                     /locus_tag="VHN20_10105"
     CDS             complement(1748..>2175)
                     /gene="gatB"
                     /locus_tag="VHN20_10105"
                     /EC_number="6.3.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010909198.1"
                     /note="allows the formation of correctly charged
                     Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation
                     of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms
                     which lack either or both of asparaginyl-tRNA or
                     glutaminyl-tRNA synthetases; reaction takes place in the
                     presence of glutamine and ATP through an activated
                     phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     GatCAB subunit B"
                     /protein_id="HEX2726160.1"
                     /translation="GRDGKTAANWVINELFGRLNKEGHGIEDSPVSADQLGQIIDLIG
                     EKVISGKIAKDLFEIVWSEGGDPRAIVESRGMKQVTDTGAIEKAIDEIIAANPDKVEQ
                     AKAKPTLLGWFVGQVMKATGGKANPQAVNELLKAKLGIG"
BASE COUNT          346 a          725 c          737 g          367 t
ORIGIN      
        1 ccatcccatc gcgcgcggcc aggtggtggt gaccggcacc cgcattgcca tcgagatcac
       61 cgagatcatc aggaagccgg aggttctgcg cggccccggc acctgcatcg gcgccagcgc
      121 catcgcggca caggccgcgg ccgagccggc cgagacggcc gagacagccg aaccggagcc
      181 ggcctgagcg agcgcggcaa ggcttgtggc cggaagatcg atctgttaaa cgctgcgccg
      241 ctccggattt tcaggttcgg cgcatccctc gcggccatgg cggaattggt agacgcgcta
      301 gcttgaggtg ctagtgggga gacccgtgga ggttcgagtc ctcttggccg caccatccct
      361 tcctcatccg gacactttcg ggtcccgttg aaggaggaag tgcttcgctc gaaggagccg
      421 gcagcgcccg ctcaaccctg ctgcaagcgc cgccggtcca gcccgccgct ttccacatgt
      481 ggccgtcgag ctcgtcgacc ctgcggccat atactggtgc cgtatttggc gcctttcgcg
      541 cgccgccgac atccgttgcg tggcgcagcg aggcggtcag gacctctgcg gacgtggtgg
      601 cagcggcaat ctcggtccgc ggtgagtttt ctcaacctcg cgtgcgtgtt gggcagcgcg
      661 tagacgtggc ccgagatcga catgcaggct gctgtcgcgg ccggtgagtt gcgcggcgaa
      721 agggtaagcc gagcgctcaa aaatcgcatc tggtgcggcg caagccgggg cgccgacgac
      781 ctgcccaaat ctgccggaac tcggtcacaa agccgatccg cggctgccca gatgtcggca
      841 caaacggcca agcttatgcg tggaacgacg actcacacgc gcggaggcca cccgatgaat
      901 ctcgaccaga agctgctcgt ttgcgaagcc atgctggccc gtctcgacgc ggcctgtgcg
      961 agcgccgagg ccgaagtgaa gcatgccgat gccctgggcc agcatatccg gcgcctgctg
     1021 ggcaatctcg aggccgagca ggcgcggctc gacgacaaga tcagggaggt gacgtcggag
     1081 cagaacggtc tcgacccgcc gcgtcaggac gagccgctcg ccgacatgga gcacatgatg
     1141 agccggctca ggggcgtcca ggcgcggctc acgcgtctcg tgcagccgcg ggaagccgcg
     1201 ctgtatctcc tccccggtca gcccgcatgg ggcgaggacg cctcaacttt cggcgggggg
     1261 ttctagcctt ttttccatga cgatggcctg gatgtcggag cggtcgccgc agcagcccga
     1321 cagccggacc tgcgtaaaac cgttgcgctc atagaagcgg atcgccggcg cgttgccgcg
     1381 ctcgacctcc aggatgatgc ggcgcgccgc cggaaaccgg tcgagcgttc tggcgagaag
     1441 cgcggcgccg attccgcgcc cctgctccgc cggcaggacg taaagccggc gcagcatcac
     1501 cgcctcgccc ccgccgaggg catacgaggt ggcgatcacc tcgccgtcgc gctcggcgag
     1561 gagaaatgcg gtcccctgct cgccgatctg gcggccaagc gtgcccggcg catgccagct
     1621 gccggtgata tcggtgacct tgtcgcggcc gagaatcggg tcgtaggtcg cgtgccaggt
     1681 cgtgatgagg aggctgcgca cggccgcgat gtcagcaggc acgacatcgc ggatcgtcag
     1741 catgcgctca cccgatgccg agcttggcct tcagaagctc gttcacggcc tgcgggttgg
     1801 ccttgccgcc ggtcgctttc atcacctggc caacgaacca gccgagcagc gtcggcttgg
     1861 ccttggcctg ctcgaccttg tcgggattgg cggcgatgat ctcgtcgatc gccttctcga
     1921 tggcgccggt gtcggtgact tgcttcatgc cgcgcgactc gacgatggca cgcgggtcgc
     1981 cgccttcgct ccacacgatc tcgaacaggt ccttggcgat cttgcccgag atcaccttct
     2041 cgccgatcag gtcgatgatc tgaccgagct ggtcggccga gacgggcgag tcctcgatgc
     2101 catggccctc cttgttgagg cggccgaaga gctcgttgat gacccagttg gcggcggtct
     2161 tgccgtcgcg gccct
//
LOCUS       DATAIQ010000609         3536 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_401157, whole genome shotgun sequence.
ACCESSION   DATAIQ010000609 DATAIQ010000000
VERSION     DATAIQ010000609.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3536)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3536)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3536
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_401157"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(86..1270)
                     /locus_tag="VHN20_10110"
     CDS             complement(86..1270)
                     /locus_tag="VHN20_10110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015952837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase"
                     /protein_id="HEX2726161.1"
                     /translation="MAPRIILALIAGALGAAPAAAQFDASCLGGLRSQAAAAGISGAT
                     FDAAMRGLSPDKSVLEAMDNQPEFKTPIWDYMAALVDDERVADGRAAMRQWGPALASA
                     ESRYGVDRHTIAAVWGVESNFGKDIGGRPLVQSLATIACYGSRRRDYFRGELFATLKI
                     IQNGDIDPRRLNGSWAGAFGHTQFMPTTFHRLAVDLDGDGRRDVVDSVPDALGSTANF
                     LRKAGWDSGHPWGYEVRLPASFNAGLAGRRNKRPISSWAAMGVRRIDGRALSGEGAAG
                     ILIPAGADGPAFLVTKNFDALYSYNAAESYGLAIAVLSDRLRGAAGIRAPWPTDDPPL
                     SRAERRDLQRLLAARGYDVGEPDGRVGQKTREAIKDIERRLGMTPTGRAGGKVLQALR
                     RG"
     gene            complement(1323..1727)
                     /locus_tag="VHN20_10115"
     CDS             complement(1323..1727)
                     /locus_tag="VHN20_10115"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX2726162.1"
                     /translation="MALHDVRDGGPRERATVAPILPARDFEQTAQFYEALGFAVASLY
                     QPPDAYLIMRRGDVELHFFPHAELDPATSICGCYIRTGEVDVVYEAFARAGLPATGIP
                     RLTPLSERPWGMREFAVIDPNGSLLRIGAPLR"
     gene            complement(1733..1912)
                     /locus_tag="VHN20_10120"
     CDS             complement(1733..1912)
                     /locus_tag="VHN20_10120"
                     /inference="COORDINATES: protein motif:HMM:NF018404.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ClpX C4-type zinc finger protein"
                     /protein_id="HEX2726163.1"
                     /translation="MMSWLTRSQPRRKALACSFCGRSEHEVTNLVAGPRVYICDACID
                     TCSAIVAAERAKGKS"
     gene            complement(1949..2554)
                     /gene="leuD"
                     /locus_tag="VHN20_10125"
     CDS             complement(1949..2554)
                     /gene="leuD"
                     /locus_tag="VHN20_10125"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012040696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009316 - 3-isopropylmalate dehydratase
                     complex [Evidence IEA];
                     GO_function: GO:0003861 - 3-isopropylmalate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HEX2726164.1"
                     /translation="MDKFTTLTGVAAPLRIINVDTDMIIPKQYLKTIKRTGLGTALFS
                     EMRYREDGSENPDFVLNKPAYRKAQILVAGDNFGCGSSREHAPWALADFGIRCVISTG
                     FADIFFNNCFQNGILPIKVSPEDLEKLFDDADRGANATLTINLEAQEIRGPDGGVIHF
                     DIDPFRKHCLLNGLDDIGITLEKAPSIDAYEQKLAQSRPWA"
     gene            complement(2639..>3536)
                     /locus_tag="VHN20_10130"
     CDS             complement(2639..>3536)
                     /locus_tag="VHN20_10130"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEX2726165.1"
                     /translation="GAGGGYDLSARLVAQHLGDFIPGRPTIVPRNMPSAGSIAAAEYV
                     FNVAPKDGTVLAMFQPTFVLEKITDRTRKYDPSRFSYVGRVDQSVLVGLVWHTAPART
                     IEEAKRTEVVLSANAAAGTSATIPWALNRLIGTKFKVVLGYESSAGMGLAMERGEAFG
                     NGSTSWDYLETKPDWLEQKKVNFLYTIALERFSKLPDVPTVLELAASERDRNILKLMA
                     STSSIGRAILSTPDVPKERLEALRRAFDEMVRDPKFVADAARRRLGVDPAPGAALERM
                     VADVTSQPDEVVEAMKRAVAPP"
BASE COUNT          553 a         1160 c         1267 g          556 t
ORIGIN      
        1 acaaggccgg gcatgacaga tggatggccg tctacgggcg ggatgccgga cttggcaagg
       61 gcttattcca acgacacccc ggcggtcatc cccgccgcag ggcctgcagg accttgccgc
      121 ccgcccggcc ggtcggcgtc atgccgaggc ggcgctcgat gtccttgatg gcctcgcggg
      181 tcttctggcc gacgcggccg tccggctcgc cgacatcata gccgcgcgcc gccaggagcc
      241 gctgcaggtc gcgccgctcg gcgcgcgaca ggggcgggtc gtcggtcggc cagggcgcgc
      301 ggatgccggc ggcgccgcgc agacggtccg acagcacggc gatggcgagc ccgtaggatt
      361 ccgcggcgtt gtaggaatag agcgcgtcga aatttttcgt gaccaggaag gccgggccgt
      421 cggcgccggc cgggatcagg atgcccgccg ccccttcacc gctcagcgcg cggccgtcga
      481 tgcggcgcac gcccatggcg gcccagctgg agatgggacg cttgttcctg cggccggcga
      541 ggcccgcgtt gaagctcgcc gggagccgca cctcgtagcc ccatggatgc ccggaatccc
      601 agccggcctt gcgcaggaaa ttggcggtgg agccgagcgc atcgggcacg gaatcgacga
      661 catcgcgccg gccgtcgccg tccaggtcga cggccaagcg gtggaaggtg gtcggcatga
      721 actgggtgtg gccgaaggcc cccgcccacg agccgttcag gcggcgcgga tcgatgtcgc
      781 cgttctggat gatcttcagg gtggcgaaca gctcgccccg gaaatagtcg cgccggcggc
      841 tgccgtagca ggcgatcgtg gcgagcgact gcaccagcgg ccggccgccg atatccttgc
      901 cgaaattcga ctcgacgccc cacaccgccg cgatggtgtg acggtcgacg ccgtagcggc
      961 tctcggcgga ggcgagcgca gggccccact ggcgcatggc ggcgcgcccg tcggcgacgc
     1021 gctcgtcatc gaccagggcg gccatgtagt cccagatcgg cgtcttgaac tcgggctggt
     1081 tgtccatcgc ctcgagcacg ctcttgtccg gcgacaagcc gcgcatggcg gcgtcgaagg
     1141 tcgcgccgga aatgccggcg gcggcggcct ggctgcgcag gccgccgagg cacgaggcat
     1201 cgaactgcgc ggcggccggc gcggcgccga gcgcgccggc gatcagggcg aggatgatgc
     1261 gaggggccat gcgcgtttgt cccagagctc tcacgaagca gccacaagcg gttaaggagc
     1321 ggttaccgga gcggcgcgcc gatgcgaagc agcgagccgt tcggatcgat gacggcgaat
     1381 tcgcgcatgc cccacggccg ctccgagagc ggcgtcagac gcgggatccc cgtcgccggc
     1441 agccccgccc gtgcaaacgc ctcgtaaacg acgtcgacct cgccggtgcg gatgtagcag
     1501 ccgcagatcg acgtcgccgg gtcgagctcg gcatgcggga agaaatgcaa ttccacatcc
     1561 ccgcgccgca tgatcagata cgcgtcaggg ggctgataca gggacgcgac ggcaaacccg
     1621 agcgcctcgt aaaattgcgc ggtctgttcg aaatcccgtg ccggcaggat gggggcgacc
     1681 gtcgcgcgct cgcgcgggcc gccgtcgcgg acatcgtgca gcgccacgtc ggtcagcttt
     1741 tgcccttggc gcgctcggcc gcgacgatgg cgctgcaggt gtcgatgcag gcatcgcaga
     1801 tgtagacgcg ggggccggcg acgagattcg tcacctcatg ctcggagcgt ccgcagaagc
     1861 tgcacgccag cgccttccgc cgcggctgcg accgggtcaa ccaggacatc atggccgtct
     1921 cctgtcgggg agccaagaat gccccagctt acgcccaggg ccggctttgc gcgagcttct
     1981 gctcgtaggc gtcgatcgac ggagcttttt ccagcgtgat gccgatatcg tcgaggccgt
     2041 taagcaggca gtgcttgcgg aacggatcga tgtcgaagtg gatcacgccg ccgtcagggc
     2101 cgcggatttc ctgcgcctcg agattgatgg tgagggtggc gttggcaccg cgatcggcgt
     2161 cgtcgaacag cttttccaga tcctcgggcg agaccttgat cggcaggatg ccgttctgga
     2221 agcagttgtt gaagaagatg tcggcaaagc cggtcgagat cacgcagcgg atgccgaaat
     2281 cggcgagcgc ccagggcgcg tgctcgcgcg acgagccgca gccgaaattg tcgccggcga
     2341 cgaggatctg cgccttgcga taggccggct tgttgagtac gaaatccggg ttctcggagc
     2401 cgtcctcgcg gtagcgcatc tcggagaaca gcgccgtgcc gagaccggtg cgcttgatcg
     2461 tcttcagata ctgcttcggg atgatcatgt cggtgtcgac attgatgatc cggagcggcg
     2521 cggcgacacc ggtgagggtg gtgaacttgt ccatggaagc cggaaacctg gttggatagc
     2581 cctttgcgcc ctctcttgcg gggtggcgcc gccatggtca agggcgcagg gggccaggtc
     2641 agggcggcgc aaccgcgcgc ttcatcgcct cgaccacctc gtccggctgg ctcgtcacgt
     2701 cggccaccat gcgttcgagc gccgcgccgg gagcgggatc gaccccgagc cgccgccgcg
     2761 ccgcgtctgc aacgaatttc gggtccctga ccatctcgtc gaaagcgcgc cgcaaggcct
     2821 ccagccgctc cttcggaacg tcgggcgtcg acaggatggc gcggccgatc gacgaggtgc
     2881 tggccatcag cttcaggatg ttgcggtccc gctcgctcgc ggcgagctcg aggacggtcg
     2941 gcacgtcggg cagcttggag aagcgctcga gggcgatcgt atagaggaag ttgaccttct
     3001 tctgctcgag ccagtccggc ttggtctcca gatagtccca gctcgtgctg ccgttgccga
     3061 aggcttcgcc gcgctccatg gcgaggccca tgccggcgct cgactcgtag cccaggacca
     3121 ccttgaactt cgtgccgatc agccggttca gcgcccacgg tatcgtcgcc gacgtcccgg
     3181 cggcggcgtt ggccgacagc acgacctcgg tccgtttcgc ctcctcgatg gtgcgggcgg
     3241 gagccgtatg ccagacgagc cccacgagga cgctctggtc gacgcggccc acataggaga
     3301 agcgcgacgg gtcgtatttg cgcgtgcggt ccgtgatctt ctccagcacg aaggtcggct
     3361 ggaacatggc cagcacggtg ccgtccttgg gcgccacgtt gaacacgtat tcggccgccg
     3421 cgatactgcc ggcgctcggc atgttgcgcg gaacgatggt cggccggccg gggatgaagt
     3481 cgccgagatg ctgcgcgacc agacgtgcgc tgaggtcgta gccgccgccg gcgccg
//
LOCUS       DATAIQ010000610         3106 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_337035, whole genome shotgun sequence.
ACCESSION   DATAIQ010000610 DATAIQ010000000
VERSION     DATAIQ010000610.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3106)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3106)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3106
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_337035"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..948
                     /locus_tag="VHN20_10135"
     CDS             <1..948
                     /locus_tag="VHN20_10135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726166.1"
                     /translation="PSGFDAGSEAFRMHLVAPLAGESMALPRPGQTVAPGWRNEADIP
                     PGASGHSPALTKLVQMLRQLAIEFDAFGDAPASRALFAELETIRLPLVLRTGETTPRM
                     VTAGAFLRACVPVLLERDAAAPGPEMPVSWPALDASASGRLAGALSASLGERFKGLRG
                     RSGRFDAAGARYQIRAFLRVRPECGCPARTVWSAYSEPFTIAPWYEGGGAPPVQVLLP
                     DATDRNLLKSLKPNVAFVVPPALNNLLGGNPDDLVKGKGEASPTPDLQWICAFNIPVI
                     TICAFIVLNIFLTLFDLIFRWLLFIKICIPFPKVGGRGG"
     gene            950..1342
                     /locus_tag="VHN20_10140"
     CDS             950..1342
                     /locus_tag="VHN20_10140"
                     /inference="COORDINATES: protein motif:HMM:NF016829.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GPW/gp25 family protein"
                     /protein_id="HEX2726167.1"
                     /translation="MATGTPLPIGWPLLPLPDEHGRLGYPGLADSVRQLIRVVLSTRP
                     GEQLMRPDFGAGLELLLNEPNSIPTRRRIRELVQSALERWERRILLDAVEVWEVEDEP
                     THIRLEIAYRLARTGEPGALAVTMQLES"
     gene            1356..>3106
                     /locus_tag="VHN20_10145"
     CDS             1356..>3106
                     /locus_tag="VHN20_10145"
                     /inference="COORDINATES: protein motif:HMM:TIGR02243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative baseplate assembly protein"
                     /protein_id="HEX2726168.1"
                     /translation="MISFQPPSLADRSFDDLVDDMLRRIPAHTPEWTNPRLGDPGRTL
                     IELFAWLADALLYRANLIPERQRLVFLKLLGLPLKPAQPARTVVSLAFAQPELRAAAA
                     LMPGGRIAGPVPFETLAETTVLPVSADAYVKRALTDQESTRAGEVIQGLARVHRLAAR
                     PKGYETTPVFEGGTAVPGGIDVFGGSADRALWLALLAPLAARPEEQPATNIQVRAALG
                     GGDSGAAALLSVGIVPALATPALFEEVGPRARVPVVWEITTRGRGPQETDYLTLEPLA
                     GSDSTAGLARAGTLRLPLPDESLIWAPSNDVGENPRAGVGDSPPRLDDAAKAARLIAW
                     LRLRPAPGQSVSQLRLTWIGVNAVEVDQRVTLSGRVLGVSTGAPDQEFQLPTGSVDGA
                     TLAMEVEEPGRGYQRWQPVDDLGAIHPDPNVAREAAVYELDAAAGVVRFGDGVRGRVP
                     EREMRIRLAFGRFGGGRLGNVAAGSLAELSALAVAGGNAPPIKVSQPLAAGGGEDAET
                     LAQAERRIPSYLRHHDRAVTAEDYRSLAFETPGINVGRVEVLPRFKPRERRFEVPGVV
                     SVMGLPLQPLSRAPNPRP"
BASE COUNT          418 a         1123 c         1095 g          470 t
ORIGIN      
        1 ccgtccggat tcgacgcggg gagcgaagca ttccgaatgc acctcgtcgc accgctcgcc
       61 ggcgagtcga tggctttgcc gcggcccggc cagaccgttg cccccggctg gcgcaacgag
      121 gccgacatcc cgccgggggc gagcggccat tcgcccgcct tgaccaagct ggtgcagatg
      181 ctgcgccagc tggcgatcga attcgacgcc ttcggcgacg cccccgcgag ccgcgcgctc
      241 tttgccgagc tcgaaaccat ccgcctgccg ctggtgcttc gcaccggaga gacgacgccg
      301 cgcatggtca ccgcgggcgc attcctgcgc gcctgcgtgc cggtgctgct cgagcgcgac
      361 gccgccgcgc cgggacccga gatgccggtg tcgtggcccg cgctcgatgc gtcggcgagc
      421 ggccgcctcg cgggcgcgct ctcggcgtct ctcggcgagc gcttcaaggg cctgcgcggg
      481 cgcagcggtc gcttcgacgc ggccggcgcg cgctaccaga tccgcgcctt cctgcgcgtg
      541 cggccggaat gcggctgccc ggcgcgcacc gtatggagcg cttacagcga gccgttcacg
      601 atcgcgccct ggtacgaggg cggcggcgcg ccgccggtgc aggtgcttct ccccgacgcg
      661 accgatcgca acctgctgaa gagcctcaag ccgaacgtcg cattcgtggt gccgccggcg
      721 ctcaacaacc tgcttggcgg caaccctgac gatctcgtca agggcaaggg cgaagcgtcg
      781 ccgacgccgg acctgcaatg gatctgcgca ttcaacatcc cggtcatcac gatctgtgcg
      841 ttcatcgtgc tcaacatctt cctgacgttg tttgacctga tcttccgctg gctcctgttc
      901 atcaagatct gcatcccgtt cccgaaagtc ggcgggagag gaggctgaga tggcgacggg
      961 cacgccactg ccgatcggct ggccgctgct gccgctcccg gacgagcacg ggcggctcgg
     1021 ttatccgggg ctcgccgaca gcgtccgcca gctaatccgc gtggtcctgt cgacccggcc
     1081 tggcgagcag ctgatgcggc ccgatttcgg tgccggcctc gagcttctgt tgaatgagcc
     1141 gaactcgatt ccgacccggc ggcgaatccg cgagctcgtg cagagcgctc tcgagcgttg
     1201 ggagcggcgc atcctgcttg acgccgtcga ggtctgggag gtcgaggacg agccgaccca
     1261 catccggctg gagatcgcct atcgcctcgc ccgcacgggc gagcccggcg cgctcgccgt
     1321 gaccatgcag ctggaaagct gaccggagga accccgtgat ctcgttccag cctccgagcc
     1381 tggccgaccg cagcttcgac gatctcgtcg acgacatgct gcgccggatt ccggcgcata
     1441 cgccggaatg gaccaatccg cgccttggcg atccgggccg gacgttgatc gagctgttcg
     1501 cctggctcgc ggacgcgctc ctctatcgcg ccaacctcat tccggaacgg cagcgcctcg
     1561 tctttctcaa gctgctgggt ctgccgctca agccggcgca gccggcccgc acggtggtga
     1621 gcctcgcctt cgcgcagccg gagctgcgcg cggccgccgc gctcatgccg ggaggccgca
     1681 tcgccggacc agtgccgttc gagaccctcg ccgaaacgac cgtgctgccg gtgtccgccg
     1741 atgcctacgt caagcgcgcg ctcaccgatc aggagagcac gcgggcgggc gaggtgatcc
     1801 agggcctcgc ccgcgtccac cgtctcgccg cgcgcccgaa ggggtatgag acgacgcccg
     1861 tgttcgaagg gggcaccgcc gtccccggcg ggatcgacgt gttcggaggc agcgccgacc
     1921 gtgcgctctg gctggcgttg ctcgccccgc tggcagcccg gccggaagag cagcctgcca
     1981 ccaatattca ggttcgtgcg gcgctcggcg gcggcgattc cggagccgcg gcgctgctct
     2041 cggttgggat cgtgccggct ctcgcgacgc ctgcgctgtt cgaagaggtc gggccgcgtg
     2101 cgcgcgtgcc ggtcgtgtgg gagatcacga cacgcgggcg cggcccgcag gagacggatt
     2161 acctgacgct cgagccgctg gccgggagcg acagcacggc cgggctcgcg cgcgccggca
     2221 cgctgcgtct gccgcttccg gatgaatcgc tgatctgggc cccctcgaac gacgtcggcg
     2281 agaacccgcg cgcgggcgtc ggcgactcgc cgccgcgcct cgacgatgcc gcgaaggcgg
     2341 cgcggttgat cgcctggctg cggctgcgcc cggcgcccgg acaatcggtc tcgcagctgc
     2401 ggctcacctg gatcggcgtc aacgccgtcg aggtggatca gcgcgtgacc ctcagcgggc
     2461 gcgtgctcgg cgtctcgacc ggcgcgcccg accaggagtt ccagcttccg accggatcgg
     2521 tcgacggagc aacgctggcc atggaagtcg aggaaccggg gcgcggctat cagcgctggc
     2581 agccggtcga cgacctcggc gccatccacc ccgaccccaa tgtcgcgcgc gaagccgcgg
     2641 tctacgagct cgacgccgcg gccggcgtgg tgcgcttcgg cgatggcgtg cgcggccgcg
     2701 tgccggaacg cgagatgcgc atccggctcg ccttcggccg gttcggcggc ggacgcttgg
     2761 gcaacgtcgc ggccggcagc ctcgccgagc tctcggcact cgcggtcgct ggcggcaatg
     2821 cgccaccgat caaggtttca cagccgcttg cggccggagg cggcgaggat gcggagacgc
     2881 tggcgcaggc ggagcgacgg atcccgtcct acttgcgcca tcacgaccgc gcggtcacgg
     2941 ccgaggatta ccgcagcctg gcgttcgaga cgcccggcat caatgtcggc cgggtggagg
     3001 tgctgccccg cttcaagccg cgcgagcgcc gcttcgaagt gcccggcgtg gtcagcgtga
     3061 tggggctgcc gctgcagccg ctgtcgcgcg cgcccaatcc gcggcc
//
LOCUS       DATAIQ010000611         1792 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_60564, whole genome shotgun sequence.
ACCESSION   DATAIQ010000611 DATAIQ010000000
VERSION     DATAIQ010000611.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1792)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1792)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1792
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_60564"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..381
                     /locus_tag="VHN20_10150"
     CDS             <1..381
                     /locus_tag="VHN20_10150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011085067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1932 domain-containing protein"
                     /protein_id="HEX2726169.1"
                     /translation="VLIKGIEALTDEMLLAARSYGLDEAVLASASKTLTRPFMDTVES
                     LTPSGVIHAKRRAEEVEMAAEAVQDAGIEPLMTRATAARLRWKESLGLKEQFKGIVPE
                     NYKIAIDALVARAQASTGKSKAAE"
     gene            520..1197
                     /locus_tag="VHN20_10155"
     CDS             520..1197
                     /locus_tag="VHN20_10155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011085070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RraA family protein"
                     /protein_id="HEX2726170.1"
                     /translation="MPAGFRVVPRARKVGSDAVERFARLPVANVSDSMARMTAGGARL
                     RPMHGGGGMAGPALTVKAPPGDNLMFHKAIALAEPGDVIVVDAGGEVTTALMGEMMLM
                     QIARRGVAGVVINGAIRDAAYIRGQNLPVFAVGVTHRGPYKNGPGEINVPVAIDGMVI
                     EPGDLIIGDDDGVLCVPFDQIESVFKAATAKFDAEQKQMANIQAGTHDASWVDKQLRD
                     QKCEGVE"
     gene            1427..>1792
                     /locus_tag="VHN20_10160"
     CDS             1427..>1792
                     /locus_tag="VHN20_10160"
                     /inference="COORDINATES: protein motif:HMM:NF013567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEX2726171.1"
                     /translation="MIQLAIVGAGGWGRRLVEAVQGKSDRVRFAAVVAPRPEKVKEFA
                     DARKIRVTPDYADVLTDPAIDGIVSCGPAQLHAEHSLAALRAGKPVLAVKPMSLFARE
                     AATLEAAAREHGVLLALGYN"
BASE COUNT          321 a          559 c          620 g          292 t
ORIGIN      
        1 gttctcatca aaggcatcga agccctgacg gacgagatgc ttctggcggc tcgctcctat
       61 ggcctcgacg aggccgtgct ggcatcggct tccaagaccc tgacgcggcc gttcatggac
      121 acggtcgaga gcctcacgcc gtccggcgtg atccatgcca agcggcgcgc ggaagaggtc
      181 gaaatggcgg ccgaggccgt gcaggatgcc gggatcgagc cgctcatgac ccgtgcgacc
      241 gcggcgcggc ttcgctggaa ggagagcctc gggctgaagg agcagttcaa gggcatcgtt
      301 ccggagaact acaagatcgc gatcgacgcg ctcgtggcaa gggcgcaggc cagcaccgga
      361 aaatccaaag cggccgagta gccctgcagg caccaatcgc ggcacagagt cagcgtctcg
      421 cgcgtcgttg ctcccgcgga tgcggcgatg cccctaccct tcccgacgcc gcaattttga
      481 gtgttccgac ctgatacgac ccacgaatgg aggaaagcga tgcctgcagg gttcagagtg
      541 gtgccacgtg cacggaaagt cggcagcgat gccgtcgagc ggttcgcgcg actgccggtc
      601 gcgaatgtga gcgacagcat ggcgaggatg acggccggcg gcgcccggct gcgtcccatg
      661 cacggcggcg gcggcatggc gggaccggcg ctgaccgtga aagctccccc gggtgacaac
      721 ctgatgttcc ataaggccat cgcgctcgcc gagccaggcg acgtcatcgt cgtcgacgcc
      781 ggcggtgagg tgacgaccgc gctcatgggc gagatgatgc tgatgcagat cgccaggcgc
      841 ggggtggcgg gcgtcgtcat caacggcgcg atccgcgacg ccgcctatat tcgtggccag
      901 aacctcccgg tgtttgctgt cggcgtgacg catcgcgggc catacaagaa cgggcccggc
      961 gaaatcaacg ttccggttgc gatcgatggc atggtgatcg agccgggcga cctcatcatc
     1021 ggcgacgatg acggcgtgct gtgtgtgccg ttcgaccaaa tcgaatccgt gttcaaggcg
     1081 gcgacggcga aattcgacgc cgagcagaag cagatggcca atatccaggc tggcacgcac
     1141 gacgcctcct gggtggacaa gcagctgcgc gatcagaaat gcgagggtgt cgagtaaggc
     1201 gcgtcccagc cgccaccagg gcccgaagcg ggccaacgaa tgcttccagt accagagcgg
     1261 gctcgattcg gattgaatcg ggcccgcttt ttccttctct ccccttctct ttccttattg
     1321 agctgtgatc cccgctcacg tcgcggtgaa gccttttttg gagaggtggg gtccacttcg
     1381 cgggatcatg ccctagtgtg gcggctgcgg aagaagggaa accgggatga tccagcttgc
     1441 gatcgtcggc gccggcggct gggggagacg cctcgtcgag gcggtgcaag gcaagtccga
     1501 ccgcgtgcgc ttcgccgcgg tggtcgcgcc tcgcccggaa aaggtcaagg aattcgcgga
     1561 cgcaaggaag atccgcgtga cgccggatta cgcggacgtg ctgaccgatc ccgccatcga
     1621 cggcatcgtc tcgtgcgggc cggcgcagct gcatgccgag cattcccttg ccgccctgcg
     1681 cgcgggcaag cccgtgctgg ccgtgaaacc gatgagccta ttcgcgcggg aggcggcgac
     1741 gctcgaggcc gccgcgcgtg agcacggcgt gcttctcgcg ctcggctaca ac
//
LOCUS       DATAIQ010000612         3069 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_124784, whole genome shotgun sequence.
ACCESSION   DATAIQ010000612 DATAIQ010000000
VERSION     DATAIQ010000612.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3069)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3069)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3069
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_124784"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(267..1739)
                     /locus_tag="VHN20_10165"
     CDS             complement(267..1739)
                     /locus_tag="VHN20_10165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015926972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEX2726172.1"
                     /translation="MSGTILVVDDDPVQRRLLEAMMRRFGYHPVIAESGDQALSILRS
                     PDGERIDLAVIDLMMPELDGLGLMGKLRESGIEMPVIVQTAHGSIETVVTAMRAGALD
                     FVVKPVSAERLQVSIKNALRVDLLEDEIRRMRRRASGTLSFRDLATKSADMGRVIRLA
                     ERAAKSNIPVLIEGESGVGKEVLARAIQGSSDRKGKPFVTVNCGAIPENLIESTLFGH
                     EKGAFTGATERHAGKFVEASGGTLFLDEIGELPLDAQVKLLRAIQEGEVDPVGGRKAV
                     RVDIRLISATNKSLLDLVKQGRFREDLYYRLNVFPMTLPPLRARREDIPDLARSFLAR
                     FAAEEGKRLRGVSAEALALLTRYDWPGNVRQLENAVFRAVVLADGDELTLAEFPQIAA
                     QVEGFDVRIPPAPSFGEPGGVPAPVREIVRVEVRDPHSLTLVGEAGELRRLEELEAEI
                     IRFALQHYRGHMSEVSRRLGIGRSTLYRKLKELGLEDEAA"
     gene            1907..>3069
                     /locus_tag="VHN20_10170"
     CDS             1907..>3069
                     /locus_tag="VHN20_10170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012319756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligoendopeptidase F"
                     /protein_id="HEX2726173.1"
                     /translation="MHNPISPTTAPVRQGAAASAAAARPLELGPLPEWDLSHLYPSMD
                     GPEFAADLSRAEGECRAFAEAYRGRLDGLARGDNAAVTLGEAVQRYEAVEDLLGRLMS
                     YAGLVYSGDTTDPKRMKFYGDTQERLTAASSELLFFTLELNRIDDVVLDRAMSRPPLA
                     RYKPWIEDVRKEKPYQLDDKIEQLFHEKSVTGRAAWNRLFDESIASLRFTLRGEELTL
                     EPTLNKLQDPDESVRKDASDALAQVFAQNLRVFTLITNTLSKDKEISDRWRGFEDVAD
                     SRHLANRVEREVVEALVSAVREAYPRLSHRYYALKAKWFGKDALGYWDRNAPLPKVEQ
                     RTIPWDEARETVLGAYSAFSPKMADIARRFFDERWIDAPVRPGKAPGAFAHPTV"
BASE COUNT          508 a         1045 c         1024 g          492 t
ORIGIN      
        1 ccgggcgtcc ggggcgcgca actcgcccat gagcggggcc gcggagggct caggcgcctg
       61 cagctcggcg aaggtagcat tggccggacc aagcgcctgg acgggcaggg gcgcgacggc
      121 aagcagcccg acccccacca aggccgccga aaccggcagc ccaatagtct ttgtcccacg
      181 gattgttacg cttgatcttg acatctgctt ctcgtcgcgt ttcgcgctgg cgcaagtgcc
      241 tgcctacacc ataacgcacg aaacggctaa gctgcctcat cctcgagacc taattctttc
      301 agctttcggt aaagggtcga acggccgatg ccgagacggc gggatacttc ggacatgtgg
      361 ccgcgataat gctgcagggc gaagcggatg atctcggcct cgagctcctc cagcctgcgc
      421 agctcgccgg cctcgccgac cagggtgagg ctgtgcgggt cgcggacctc gacccggacg
      481 atctcccgca ccggcgcggg gacgccgccc ggctcgccga aggacggggc gggcggaatg
      541 cgcacgtcga agccctcgac ctgggcggcg atctgaggga actcggcgag ggtgagctcg
      601 tcgccgtccg ccaggaccac ggcgcggaac acggcgttct ccagctggcg cacgttgccc
      661 ggccagtcgt agcgcgtcag cagcgccagc gcctcggccg aaaccccgcg caggcgcttg
      721 ccctcctcgg ccgcgaaacg ggccaggaac gagcgcgcca ggtcggggat gtcctcccgc
      781 cgtgcccgga gaggcggcaa cgtcatcggg aacacgttga gccggtaata caggtcctcg
      841 cggaagcggc cctgcttgac caggtcgaga aggctcttgt tggttgcgga gatcaggcgg
      901 atgtcgacgc gcacggcctt gcgcccgccg accggatcga cctcgccttc ctggatcgcc
      961 cgcagcagct tcacctgcgc atcgagcggc agctcgccga tctcgtcgag aaacagggtg
     1021 ccgccgctgg cctcgacgaa tttgccggca tggcgctcgg tcgcgcccgt gaaggcaccc
     1081 ttctcgtgtc cgaacagggt cgactcgatc aggttctcgg ggatggcgcc gcaattgacc
     1141 gtcacgaacg gcttgccctt gcggtcgctc gagccctgga tggcgcgcgc cagcacctcc
     1201 ttgccgacgc ccgattcgcc ctcgatcagc accgggatgt tggacttggc ggcgcgctcg
     1261 gcgagccgga tgacccggcc catgtcggcg ctcttggtgg cgagatcgcg aaagctcagg
     1321 gttccggacg cgcgccggcg catgcgccgg atctcgtcct cgaggagatc gacgcggagc
     1381 gcgttcttga tcgagacctg caggcgctcg gcgctgaccg gcttgacgac gaagtcgagc
     1441 gcgccggcgc gcatcgcggt gacgaccgtc tcgatcgagc catgcgccgt ctgcacgatg
     1501 accggcatct cgatgccgct ctcgcgcagc ttgcccatga gccccaggcc gtcgagctcg
     1561 ggcatcatca ggtcgatgac ggcaagatcg atccgctcgc cgtccggcga acgcaagatc
     1621 gaaagcgcct ggtcgccgct ttcggctatc accggatgat agccgaaacg ccgcatcatc
     1681 gcctcgagca ggcggcgttg aacgggatca tcgtcaacaa cgagaatcgt gcccgacatg
     1741 taaatggtcg cttcccgggg ggtgtttcgt ttcggcgcga tgctggggga caagagtaaa
     1801 gctgagctta atggcggccc ggccttgtgc tcggccatgg ccgggtaggg ttgatcatcc
     1861 gttgccgtga ccgatatgtg ataatcggtt cgcgaagctc ccgatcatgc acaaccccat
     1921 atctccgacg accgcccccg tccgccaggg ggccgccgcc agcgcggctg cggcccggcc
     1981 cctcgagctg gggccgcttc cggaatggga cctgtcgcat ctttacccgt ccatggacgg
     2041 tcccgaattc gcggccgacc tgtcgcgcgc ggaaggcgaa tgccgggcct tcgccgaggc
     2101 ctatcgcggc aggctcgacg ggttggcacg cggcgacaac gccgccgtca cgctgggcga
     2161 ggccgtgcag cgctacgagg cggtcgagga cctgctcggg cggctcatgt cgtatgccgg
     2221 tctcgtctat tccggcgaca cgacagatcc gaagcggatg aagttctatg gtgacacgca
     2281 ggagcggctc acggccgctt ccagcgagct gctcttcttc acgctcgagc tcaatcgcat
     2341 cgacgacgtg gtgctcgacc gcgccatgtc gcggccgccg ctcgcccgct acaagccctg
     2401 gatcgaggac gtccgcaagg agaagcccta ccagctcgac gacaagatcg agcagctgtt
     2461 ccacgaaaaa tccgtcactg gccgcgccgc ctggaaccgg ctgttcgacg agagcattgc
     2521 gtcgctgcgc ttcacgttgc gcggcgagga gctcacgctc gagccgacgc tcaacaagct
     2581 gcaggatccg gacgagagcg tccgcaagga cgcctccgac gcgctcgccc aggtcttcgc
     2641 ccagaacctg cgcgtcttca cgctgatcac caacaccctg tcaaaggaca aggagatttc
     2701 cgaccgctgg cgcggcttcg aggacgtggc cgattcgcgc catctggcga atcgcgtcga
     2761 gcgcgaggtc gtcgaggcgc tcgtgtcggc cgtgcgcgag gcctacccgc gcctctcgca
     2821 ccgctattac gcgctgaagg cgaagtggtt cggcaaggac gcgctcggct attgggatcg
     2881 caacgcgccg ctgcccaagg tggagcagcg cacgattcca tgggacgagg cgcgcgaaac
     2941 ggtgctcggc gcctattcgg ccttctcgcc gaaaatggcc gacatcgccc ggcgcttctt
     3001 cgacgagcgc tggatcgacg cgccggtgcg gcccggcaag gcgccgggcg ccttcgcgca
     3061 tccgacggt
//
LOCUS       DATAIQ010000613         3832 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_309212, whole genome shotgun sequence.
ACCESSION   DATAIQ010000613 DATAIQ010000000
VERSION     DATAIQ010000613.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3832)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3832)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3832
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_309212"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..369)
                     /locus_tag="VHN20_10175"
     CDS             complement(<1..369)
                     /locus_tag="VHN20_10175"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726174.1"
                     /translation="MGADRQIGTRARLRTEFVVSLGILGAVALLPAVVANEYWRGVVI
                     VSMYFAMLAAAWSLLAGYTGQFSLAPATFGMIGAYTTGLLAYHLGAPPLVGIPAAIVV
                     AGFIGLVLGRIVMRLRGPYLA"
     gene            complement(369..1259)
                     /locus_tag="VHN20_10180"
     CDS             complement(369..1259)
                     /locus_tag="VHN20_10180"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX2726175.1"
                     /translation="MLALDLAINGLIIGTFYALMAIGLSLIFGILKVVNFAHGEFYMV
                     GAYAYTLSALMLGLSPWLALPLALVLGMLVGLVVERLLMRPLYAGYTSWGLMRDEYAV
                     IVTFGLSLLLINLVDKIVGPYAYKGLPLVGISRMSLGPILISGHRLIAAIVAVAVIVA
                     VALVIRYSYWGRQIQAVAQNRLGASLAGIDTAKASAIVFALAGGLAAVSGALLANIFN
                     PTPDVGVFPAIKSYVIVVLGGMGSVPGSIIASLLLGVLESFGGVYLSYQYRDTFGLVI
                     LILFLLFRPQGLFGEKAREV"
     gene            complement(1330..2544)
                     /locus_tag="VHN20_10185"
     CDS             complement(1330..2544)
                     /locus_tag="VHN20_10185"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX2726176.1"
                     /translation="MLSRRSAFATLAAGLLATTAASAADPIKVGVTIAQSPPGSVSQG
                     TQVKDGVEVAAKMINDAGGVLGRPIELVFEDTQGIPEKARAAVEKLITRDKVTAVVGE
                     HQSSAALAGIEVAHRYGVPYVNTNAWSDVVREKGYAEVFNPGNYNSRVAIAMADTMKA
                     LGAKRVIAFCENTDYGVGLAKLLGDQIKERAPGIDYKYETLDRAGKDFLPALLPLRAN
                     PPDAVVEIMLPPAAYILINQLYEQGIAPSAKTWLYDASGIADYPDFWQNVTDSAKGML
                     VFGLYHPKMAMPDLGKKVAEAYTAKTKHEPNRLLFQAADSLFIVAEAVKAAGSSDPKA
                     VVGALEKLKWTGTRGEITFSGEKSGFKYHQWLEIPYVTFQITAVKQAIADTKLVQDPG
                     KPLDMSRIEKVK"
     gene            2863..3429
                     /locus_tag="VHN20_10190"
     CDS             2863..3429
                     /locus_tag="VHN20_10190"
                     /EC_number="2.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014892369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0018104 - peptidoglycan-protein
                     cross-linking [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HEX2726177.1"
                     /translation="MVRALVRAGVVAALLTASPALALNDPLSRGPLADFLNIFVQQPI
                     PRQTVAWHGGHARGTVVISTSRRRLYYVLGNGQAIQYGVGVGRQGFTWSGTKTVSNKR
                     EWPDWRPPAQMLRRRPDLPRYMRGGIENPLGARAIYLGSSLYRIHGSNEPDTIGAAVS
                     SGCIRMTNRDVIDLYERVRIGTKVVVLR"
     gene            complement(3573..>3832)
                     /locus_tag="VHN20_10195"
     CDS             complement(3573..>3832)
                     /locus_tag="VHN20_10195"
                     /inference="COORDINATES: protein motif:HMM:NF020918.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phasin family protein"
                     /protein_id="HEX2726178.1"
                     /translation="QEISREWMSLAQHRLQRNLEAIETLASCRTMQDLVAAQTQLVRD
                     NMQEIVDNSRHIAETSVKVANEAAEVLTGPAKAAARLTRAA"
BASE COUNT          629 a         1249 c         1342 g          612 t
ORIGIN      
        1 cgcgaggtag gggccgcgca ggcgcatcac gatccgtccc agcacgagcc cgatgaagcc
       61 ggcgacgacg atcgccgccg ggatgccgac gagcggcggc gcgccgaggt ggtaggcgag
      121 gagcccggtc gtgtaggcgc cgatcatgcc gaaggtcgct ggcgccagcg agaattgtcc
      181 ggtgtagccg gcgagcaggc tccacgccgc cgcgagcatt gcgaaataca tcgacacgat
      241 gacgacgccg cgccagtatt cgttggccac gaccgccggc agcagggcga ccgcgccgag
      301 gatgccgagc gagacgacga actcggtgcg cagccgggcg cgcgtgccga tctggcgatc
      361 cgcgcccatc acacctcccg cgccttctcg ccgaacaggc cttgcggccg gaacagcagg
      421 aacaggatca ggatgacgag cccgaacgtg tcgcggtatt ggtacgagag atagaccccg
      481 ccgaagcttt cgagcacgcc gagaagcagg ctggcgatga tgctgcccgg caccgagccc
      541 atgccgccga gcacgacgat cacgtaggac ttgatcgccg gaaacacgcc gacgtcgggg
      601 gtcgggttga agatgttggc gagcaacgcg cccgagaccg cggcgaggcc gccggccagg
      661 gcgaagacga tggcgctcgc cttggcggtg tcgatcccgg cgagagacgc gccaagccgg
      721 ttctgcgcca ccgcctggat ctggcgcccc caatacgagt agcggatcac gagcgcgacg
      781 gccacgatca cggcgaccgc gacgatcgcc gcgatcagcc gatggccgct gatcaggatc
      841 ggcccgagcg acatgcgcga gatgccgacc agcggcaggc ccttgtaggc atagggcccg
      901 acgatcttgt cgacgaggtt gatgaggagg agcgacaggc cgaaggtgac gatcaccgcg
      961 tattcgtcgc gcatcagccc ccacgacgtg tagccggcgt agagcgggcg catcagcagg
     1021 cgctcgacga cgaggccgac gagcattccg agaaccaggg cgagcggcag cgccagccac
     1081 ggcgacagcc cgagcatcag cgccgacagc gtgtaggcat aggcgccgac catgtagaac
     1141 tcgccgtggg cgaagttcac gacttttagg atgccgaaga tcagcgagag gccgatcgcc
     1201 atcagcgcgt agaacgtgcc gatgatgagg ccgttgatcg cgagatcgag cgcgagcatg
     1261 cggtgggtgc ggaaggaggg gagggcggaa gacgcggtcg cgtctcccgc ggctgacggc
     1321 ggccgccggt tacttcacct tctcgatgcg cgacatgtcg agcggcttgc cgggatcctg
     1381 caccagcttg gtgtcggcga tcgcctgctt caccgccgtg atctggaagg tcacgtaggg
     1441 gatctcgagc cactggtggt atttgaagcc ggatttctcg cccgagaacg tgatctcgcc
     1501 ccgcgtgccg gtccacttca gcttttcgag cgcgccgacc accgccttgg gatcgctcga
     1561 gccggccgcc ttcaccgcct cggcgacgat gaacaggctg tcggctgcct ggaacaggag
     1621 gcggttcggc tcgtgcttgg tcttcgccgt gtaggcctcg gcgaccttct tgccgagatc
     1681 gggcatcgcc atcttcggat gatagagccc gaacaccagc atgcccttgg cggaatcggt
     1741 cacgttctgc cagaagtccg gatagtcggc gatgccggac gcgtcgtaga gccaggtctt
     1801 ggcgctcggc gcgatcccct gctcgtagag ctggttgatc aggatgtagg cggccggcgg
     1861 cagcatgatc tcgacaaccg cgtcgggcgg gttggccctg agcggcagca gcgccggcag
     1921 gaagtctttg ccggcgcggt cgagcgtctc gtatttgtag tcgatgccgg gcgcgcgttc
     1981 cttgatctgg tcgccgagca gcttggcgag gccgacgccg tagtcggtat tctcgcagaa
     2041 ggcgatcacg cgcttggcgc cgagggcctt catcgtgtcg gccatggcga tggcgacgcg
     2101 gctgttgtag ttgccggggt tgaacacctc ggcatagccc ttctcgcgca ccacgtccga
     2161 ccacgcattg gtgttgacgt aggggacgcc gtagcggtgc gccacctcga tgccggcgag
     2221 cgccgccgag ctctgatgct cgccgaccac cgccgtgacc ttgtcgcgcg tgatcagctt
     2281 ctcgaccgcg gcgcgcgcct tctcggggat gccttgcgta tcctcgaaga cgagctcgat
     2341 cgggcggccg agcacgccgc cggcgtcgtt gatcatcttg gccgcgacct cgacgccgtc
     2401 cttgacctgc gtgccttgag agaccgagcc gggcggcgac tgggcgatgg tgacgccgac
     2461 cttgatggga tcggccgcgg acgcggcggt ggtggccagc aatcctgcgg ccagcgtggc
     2521 gaaagcgctg cgacgagaca acatcctgac gttcctccgg aatggctggt ggtccagctc
     2581 actttgtcgg cgaacgttag tggagccgca ggcgacggtc gagaccaaaa agcgcctctc
     2641 cagcctgtca ttccggggcg atccgaagga tcgagcccgg aacccacggc cgggtgaggc
     2701 atcggtcgca agctttgtaa cttgtcatgg gttccgggct cggccttcgg ccgccccgga
     2761 atgacaatgg aaggggaagg gcgtgcgggg ttgccagacc ggccggccgg ctggaatact
     2821 ggccgcaccg ccagggcagg gcggtgatcc agggtaatga ccatggtccg tgcattggtt
     2881 cgcgccggcg tcgtcgccgc gttgctgacg gcatctccgg ctctcgcgct caacgaccct
     2941 ctgagccgcg gcccgctcgc cgatttcctg aacatcttcg tgcaacagcc gatcccccgc
     3001 cagaccgtgg cctggcacgg cggccatgcg cgcggcacgg tcgtcatctc gaccagccgg
     3061 cgccggctct actacgtgct cggcaacggc caggcgatcc agtacggcgt cggcgtcggc
     3121 cggcagggtt tcacctggtc cggcaccaag accgtttcga acaagcgcga atggccggac
     3181 tggcggccgc cggcgcagat gctgcggcgc cggccggacc tgccgcgcta catgcgcggc
     3241 ggcatcgaga acccgctcgg cgcccgcgcc atctatctgg gctcgagcct ctaccgcatc
     3301 catggctcga acgagccgga cacgatcggc gcggcggtgt cgtcgggctg catccgcatg
     3361 accaaccgcg acgtcatcga tctctacgag cgcgtgcgga tcggcaccaa ggtcgtcgtc
     3421 ctgcggtaac caaagcgcgc tgtcattccg gggcgcggcg aagccgcgaa cccgggaccc
     3481 acgactgggt gcaacgctgc gaatcgctgt ctcacgcggt cgtgggttcc gggctctcgc
     3541 cttcggcgag ccccggaatg acgatgttgc ggctacgcgg cgcgggtaag acgcgcggcc
     3601 gccttggcgg ggcccgtcag cacctcggcg gcctcgttgg cgaccttgac cgacgtctcg
     3661 gcgatgtgcc ggctgttgtc gacgatctcc tgcatgttat cgcgcacgag ctgcgtctgc
     3721 gcggcgacga ggtcctgcat cgtgcggcat gaggcgagcg tctcgattgc ttcgaggttc
     3781 cgctgcaggc ggtgctgcgc gaggctcatc cactcgcgcg agatctcctg ga
//
LOCUS       DATAIQ010000614         1728 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_309324, whole genome shotgun sequence.
ACCESSION   DATAIQ010000614 DATAIQ010000000
VERSION     DATAIQ010000614.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1728)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1728)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1728
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_309324"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1688)
                     /locus_tag="VHN20_10200"
     CDS             complement(<1..1688)
                     /locus_tag="VHN20_10200"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEX2726179.1"
                     /translation="MVRQGFGDVEAAFGAAHAIVELDLCIGRHSGVPLETRGAIGRYD
                     AARDVLELHGAAKVPHKNRESLARAFGRSTAALHLFEGHVGGGFGVRGEIYPEDILVL
                     AAALRLERPVKWIEDRREHLMATNHSRQQRHRIRASVDADGRLLAIDNEFYHDQGAYP
                     RTHALRVAETTCGILPGPYRLPAYRAVGHYRLTNKTPAATYRAPGRYETNFVRERLLD
                     AIAQRLGLSPIEVRRRNLIRREEMPYARPLMVLGDDVAYDSGDYAGLLDKSLARLRWD
                     EMQATLARRRAAGELVGAGLAMFVEKSGLGPSDGVRVNVDTSGHVEVITGGASVGQGF
                     ETVMAQVCAEVLGVDYRRIRVVHGRTDRIEYGIGAHASRATVMTANATAVAAGTVREK
                     ALGLAAELLQALPEQLDIIDGEVVRADTRSGASISLAEIAGHLRPTSSTRRGREPGLA
                     ADGWFHTDHQTYPYGNQIAVVRVDPDTGAVIVERFLVAYDIGRAINPMLVKGQIAGGF
                     AQGLGGALYEEFRYNEQGEPLSVTFADYLLPTLREMPVLDILLAEDAPSIRNPLG"
BASE COUNT          275 a          574 c          627 g          252 t
ORIGIN      
        1 ccgagcgggt tgcggatgct cggcgcgtcc tcggcgagca gaatgtcgag aacgggcatc
       61 tcgcgcagcg tcggcagtag atagtcggcg aacgtcaccg acagcggctc gccctgctcg
      121 ttgtagcgga actcctcgta aagcgcgccg ccgagcccct gggcaaagcc gccggcgatc
      181 tgccccttga cgagcatcgg gttgatggca cgcccgatgt cgtaggcaac gaggaaccgt
      241 tcgacgatga cggcgccggt gtcgggatcg acccgcacga ccgcgatctg gttgccgtaa
      301 gggtacgtct ggtggtcggt gtggaaccag ccgtccgccg caagcccggg ctcgcggccg
      361 cggcgggtcg acgaggtcgg ccgcaaatgg ccggcgatct cggcgaggct gatcgaggcg
      421 ccggaccgcg tgtcggcgcg aacgacttcg ccgtcaatga tgtcgagttg ttcaggcaaa
      481 gcttgcagga gctcggccgc gagcccgagg gctttctccc gcaccgtgcc ggcggcgacc
      541 gccgtggcat tggcggtcat gacggtggcg cgcgacgcat gcgcgccgat cccatattcg
      601 atgcggtcgg tgcggccgtg aacgacgcgg atgcggcggt agtcgacgcc gagcacctcg
      661 gcgcagacct gcgccatcac ggtctcgaaa ccctggccca cggacgcgcc gcctgtgatc
      721 acctccacgt gcccgctcgt gtcgacgttg acacgcacgc cgtcgctggg gccgaggccg
      781 ctcttctcga cgaacatggc gaggccggcg cccaccaact cgccggcggc gcgccgccgt
      841 gcgagcgtgg cctgcatctc gtcccagcgc aggcgggcga gcgacttgtc gagcagcccc
      901 gcgtaatcgc ccgaatcgta ggcgacgtcg tcgccgagga ccatcagcgg ccgcgcgtaa
      961 ggcatctcct cgcggcggat gaggttacgc cggcgcacct cgatgggaga aaggccgagg
     1021 cgctgggcga tggcatcgag gagacgctca cgcacgaaat tggtctcata gcgcccgggc
     1081 gcgcgatagg tggcggcggg cgtcttgttg gtcagccgat aatggccgac ggcacgatag
     1141 gcagggaggc gataagggcc gggcaggatg ccgcacgtcg tctcggcgac acgcagggcg
     1201 tgcgtgcgcg gataagcacc ctggtcgtga tagaactcgt tgtcgatggc cagaagccgc
     1261 ccgtcggcgt cgacggaggc gcgaatgcgg tggcgctgct ggcgcgagtg gttggtcgcc
     1321 atcagatgct cgcgccggtc ctcgatccat ttcaccggcc gctcgagacg cagggccgcc
     1381 gcgagcacga ggatgtcctc gggataaatc tcgccgcgga cgccgaagcc gccgccgaca
     1441 tggccttcga acaggtgcag cgccgccgtg ctgcggccga acgcccgtgc gagagattcg
     1501 cggttcttgt gcggcacctt ggcggcgcca tgcagctcga gcacgtcgcg cgccgcatcg
     1561 tagcggccga tggcaccgcg cgtctcgagc ggcacgccgg aatggcggcc gatgcaaagg
     1621 tcgagctcga cgatcgcatg ggcggcgccg aaagcggctt cgacatcgcc aaagccctgc
     1681 cggacgatcg cagcttccgt cgagcgcccg gccgcgaact cgccgggc
//
LOCUS       DATAIQ010000615         3142 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_125043, whole genome shotgun sequence.
ACCESSION   DATAIQ010000615 DATAIQ010000000
VERSION     DATAIQ010000615.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3142)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3142)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3142
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_125043"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..800)
                     /locus_tag="VHN20_10205"
     CDS             complement(<1..800)
                     /locus_tag="VHN20_10205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726180.1"
                     /translation="MVAFTKRSKWLTGTVLVAGIVGLWIGQGLLQGTAEAENGDVEAP
                     RFEVDPFWPKPLPNKWLLGSVIGVWADEQDNIWIIHRSSATLHNNEKGAELNPPIAEC
                     CRGAPPVLVFDPAGNLVRSWGGPGQGYEWPQSNHGIHVDYKGNVWIGGNGEKDAHALK
                     FSKEGKFLLQVGHFGKNAGSNDPDNFGRVAKIWVDPKTNEAYLADGYGNKRVAVLDAD
                     TGKMKRYWGAYGNKPDDANLGPYDPKAPPAQQFRNPVHCVERANDGLV"
     gene            978..2291
                     /locus_tag="VHN20_10210"
     CDS             978..2291
                     /locus_tag="VHN20_10210"
                     /inference="COORDINATES: protein motif:HMM:NF025167.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HupE/UreJ family protein"
                     /protein_id="HEX2726181.1"
                     /translation="MLSRAAAALLAICALVAGAAAHEPPADVRIAMFVKPAGNRLELV
                     LRVPMAAMQEVDVPTRGPGYLDMSRAEAALRDAVKLWLIDNLEVYENDRSLPAPQIGH
                     ARVSLPSDRSFASYDQARRHLDGPRLADDLDLYWSQQLLDVLLAYPIQSERSDFSIRP
                     RVERLGIRVVTALTFLPPQGSPRLFELHGDPGLVRLDPRWYHAALRFVKSGIEHIVEG
                     LDHVLFLLCLVIPFRQLHALVILATSFTVAHSIALVAAVFGFVPDALWFPPLIETLIA
                     ATIVYTALENMIGSTVRRRWVTAFAFGIVHGFGLSFALRESFQFAGDHLITALLAFNV
                     GVEIGQVLLLIVLVPLLQALFRYVLPERIGVIILSTLVAHTGWHWMTERGEQLLKFPL
                     PTLDAAFIAGAMRALMAGLILALLVLLASGWLKRRMPAERRAPAE"
     gene            complement(2299..2427)
                     /locus_tag="VHN20_10215"
     CDS             complement(2299..2427)
                     /locus_tag="VHN20_10215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726182.1"
                     /translation="MRNTEHLSRPPNSLVVDEPSMERLLDMLARLLTHGLAGLARK"
     gene            complement(2492..2929)
                     /locus_tag="VHN20_10220"
     CDS             complement(2492..2929)
                     /locus_tag="VHN20_10220"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR family transcriptional regulator"
                     /protein_id="HEX2726183.1"
                     /translation="MMRPAERTRLALIEAATAIFADKGFEAGSVRLITQRAKANQAAI
                     NYDFGSKEGLYREVPRTALHAFDELSLLDEATLPDMPRDEALRLFLRQQLMPLLRRNQ
                     ISRYLRVLNWEIMHRTPGLRGASRQRAHSDADRTARPRTQVPA"
BASE COUNT          469 a         1066 c         1012 g          595 t
ORIGIN      
        1 tagacgaggc cgtcattggc gcgctcgacg caatgcaccg gatttcgaaa ctgctgcgcc
       61 ggcggcgcct tgggatcata cgggccgaga ttggcatcgt ccggcttgtt gccgtaggca
      121 ccccagtagc gcttcatctt gccggtgtcg gcatcgagca ccgcgacgcg cttgttgccg
      181 tagccgtcgg ctaaataggc ttcgttggtc ttgggatcga cccagatctt ggcgacacgc
      241 ccgaaattgt cgggatcgtt gctgccggcg ttcttgccga agtggccgac ctgcagcagg
      301 aacttgccct ccttgctgaa cttgagcgcg tgggcgtcct tctcgccgtt gccgccgatc
      361 cagacattgc ccttgtagtc gacgtggatg ccgtggttgg actgcggcca ttcatagccc
      421 tgcccggggc cgccccacga tctcaccagg tttccggccg ggtcgaagac cagaaccggc
      481 ggcgcgccgc ggcagcactc ggcgataggc gggttgagct cggccccttt ctcgttgttg
      541 tgcagcgtcg ccgaactccg atggatgatc cagatattgt cctgctcgtc ggcccacacg
      601 ccgatcaccg agccgagcag ccatttgttg ggcaggggtt tgggccagaa cggatcgacc
      661 tcgaaacgcg gcgcctcgac gtcaccgttc tcggcctcgg cggtcccttg caaaaggccc
      721 tgcccaatcc aaagaccgac gatgccggca acaagaaccg tgccggtcag ccatttgctg
      781 cgttttgtga aggcgaccat cacatccctc ccatcgcctc agcgacttgt tcaagagcta
      841 tgcgcgccgg gatcgatgcg cgccgacgcg tggcgccgct ggacttgggc gaactatgtg
      901 cgcaacaatc cgcgctgtca ttacacatgt gcgttgatgc gatggatggg aaccggttcc
      961 gctgttggga atggcctgtg ctctcgcgcg ccgccgctgc cctgctcgct atctgcgccc
     1021 tcgttgccgg agcggctgcg cacgagcccc cggccgacgt gcgtatcgcc atgttcgtca
     1081 agccggcagg aaaccggctc gagctcgtcc tgcgcgtgcc catggcggcc atgcaggagg
     1141 tcgacgtgcc gacccgtggc cccggctatc tcgacatgtc ccgcgccgaa gcggccttgc
     1201 gcgacgcggt gaagctctgg ctgatcgata acctcgaggt ctatgagaac gaccgcagcc
     1261 tgccggcgcc gcagatcggg catgcgcgcg tctcgctgcc gtcggaccgc tccttcgcct
     1321 cttacgacca ggcacgccgg catctggacg gtccacgcct cgccgacgac ctcgacctct
     1381 actggagcca gcagctgctc gacgtgctgc tcgcctaccc gatccaatcc gagcgctcgg
     1441 atttttccat ccgcccgcgc gtcgagcggc tcggcatccg ggtcgtgacg gccctgacgt
     1501 tcctgccgcc gcaggggagc ccgcgactct tcgagctgca cggcgatccc ggcctcgtgc
     1561 gactcgaccc gcgctggtac catgccgccc tgcgcttcgt taagtccggc atcgagcaca
     1621 tcgtcgaagg cctcgaccac gtgctgttcc tgctctgcct ggtgatcccg ttccggcaac
     1681 tgcacgcgct cgtgatcctc gccacgtctt tcaccgtcgc ccattcgatc gcgctggtcg
     1741 ccgcggtctt cggcttcgtg cccgatgcgc tgtggttccc gccgctgatc gaaaccctga
     1801 tcgccgccac catcgtctac acggccctgg aaaacatgat cggcagcacc gtgcggcggc
     1861 gctgggtcac cgctttcgcc ttcgggatcg tgcacggctt cggcctgtca ttcgcgctgc
     1921 gcgagtcgtt tcagttcgcg ggcgatcacc tgatcaccgc gctgctcgcc ttcaacgtcg
     1981 gcgtcgagat cggccaggtg ctgctgctga tcgtgctggt cccgctcctg caggcgctgt
     2041 tccgctacgt gctgccggag cggatcggcg tgatcatcct ctcgaccctc gtcgcccata
     2101 cgggctggca ctggatgacc gagcgcggcg agcagctcct gaaattcccg ctgccgaccc
     2161 tcgatgccgc cttcatcgcc ggcgccatgc gcgcgctgat ggcggggctg atcctggcgc
     2221 tgctcgtcct gctcgccagc ggctggctca agcgccgcat gccggccgag aggcgtgctc
     2281 cggcggaata acgtccgctt acttccgcgc cagtccggcc agcccgtggg tgagcagccg
     2341 tgcgagcatg tcgagcagcc gctccatgga gggctcgtcg acgacgaggc tattgggggg
     2401 ccgggacagg tgctcggtgt tacgcacgaa gatgtaggcc tggttgagca gccagatggt
     2461 agcgatcgtc ttctcttccc ggctcgccgc ctcaggcagg aacttgcgta cgaggccttg
     2521 cggtgcgatc agcgtcggaa tgcgctcgct ggcgagaagc tcctcgaaga cctggggtgc
     2581 gatgcatgat ctcccagttg agcacgcgca gatagcggct gatctggttg cgcctgagca
     2641 gcggcatcag ctgctgccgc aggaacagcc gcagcgcctc gtcgcgcggc atgtccggca
     2701 gggtggcctc gtcgagcagg ctgagctcgt cgaaggcatg cagcgccgtg cgcgggacct
     2761 cccggtaaag gccctccttg ctaccgaaat cgtagttgat ggcagcctgg ttcgccttcg
     2821 ccctttgtgt gatcagacgg accgatccgg cttcgaaccc cttgtcggcg aaaatcgccg
     2881 tggctgcttc gatcagggcg aggcgcgtgc gctcggcagg ccgcatcatc agagagccgt
     2941 gggatgaacc cgatgaccgt atcgccgagc gacacgacgg tgctcacgat cgcctcacct
     3001 gaaggcacaa aaccggggag cggcaaaccg agaaggcgca gccgcttcgg ctcggcgggg
     3061 gcaggttcgt ggcggtggaa cctgcttcgg cgacctgcgt cggcgcgacg tgacgcgggg
     3121 gcggcatcac ggcagcgacg gc
//
LOCUS       DATAIQ010000616         2090 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_309472, whole genome shotgun sequence.
ACCESSION   DATAIQ010000616 DATAIQ010000000
VERSION     DATAIQ010000616.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2090)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2090)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2090
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_309472"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            213..560
                     /locus_tag="VHN20_10225"
     CDS             213..560
                     /locus_tag="VHN20_10225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008837892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726184.1"
                     /translation="MTTPASPLQPRIVRVWRGRTARDKADAYQRYLLENGIAPLEKKG
                     ALGVHMFREDRDGESEFVTISYWPSVAAMAGGSGEDPRRVHHLPRDPEFLIELPQSVQ
                     ILDILETRGRCTA"
     gene            complement(686..1174)
                     /gene="cynS"
                     /locus_tag="VHN20_10230"
     CDS             complement(686..1174)
                     /gene="cynS"
                     /locus_tag="VHN20_10230"
                     /EC_number="4.2.1.104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012114641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008824 - cyanate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0009636 - response to toxic substance
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyanase"
                     /protein_id="HEX2726185.1"
                     /translation="MKRADLTEKILDLKREKGWTWRTICDEIGGMSDVLIVGALLGQM
                     KLVKPQARRAAELFGLSAAEEAMLNEVPYRGTGTPMPPTDPLIYRFYEMVMINGPAWK
                     ALIEEEFGDGIMSAIDFDIAIERQANPKGDRVQITMSGKFLPYKFYGNQQGIPEYGFK
                     EA"
     gene            complement(1408..>2090)
                     /locus_tag="VHN20_10235"
     CDS             complement(1408..>2090)
                     /locus_tag="VHN20_10235"
                     /inference="COORDINATES: protein motif:HMM:NF012892.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cation-translocating P-type ATPase C-terminal
                     domain-containing protein"
                     /protein_id="HEX2726186.1"
                     /translation="VMFAGLLGLVSADVGLFLPLLAAHLLWINLITDGPPALALGVDP
                     KDPDVMLRAPRQRGTGVLTAEDWLRLAAIGGVMMVGTLAVLDAYYPGGLFSPLAKGSA
                     PNVADETHARTMAFTTLMMFQLFNAFNCRSSWRSAFGGVTENMWLVAAVLLSLVMHVL
                     VIYVPVLQTAFHTVPLSAHDWAIATMVAVTLLAVMEATKLLMRRRSARIALAEQPPEP
                     ALRARQGA"
BASE COUNT          345 a          709 c          708 g          328 t
ORIGIN      
        1 gcgccggcgg cggcatgcag cagcgatttt ccgatgttca tgggcgatct ccctggtcga
       61 agctatgcgg cggaaactct cacgctccgc ttgatggcta ccattgctcc gcgcgcgggt
      121 cgccgcaagg cactggcaga cgcctcacca tgttatgagg ccgttgcgct gccgtgggca
      181 gcgacgcagg atggcctccg gggagcccca tcgtgacaac gccagcaagc ccgttgcagc
      241 caagaatcgt ccgggtctgg cgcggccgca cggcgcgcga caaggcggac gcctaccagc
      301 gctacctcct cgagaacggg atcgcgccgc tcgagaagaa gggcgcgctc ggggtccaca
      361 tgttccgtga ggaccgcgac ggcgagagcg agttcgtgac catctcgtac tggccgagcg
      421 tcgccgccat ggccggcggc tccggcgagg acccgcggcg cgtccatcac ctgccgcgcg
      481 accccgagtt tctgatcgaa ctgccgcaga gcgtgcagat cctcgatatc ctcgagacgc
      541 gcggccgctg cacggcgtaa tcgctcccgc gagcagcgtg ccaagtggct ccagcgccac
      601 tgcgcgaggg ctggcgtttc gaccccagcc cgctcggacg catccgcgtc cgagtcggcc
      661 ctcccctgag gcgagggaat tgggatcacg cctccttgaa tccgtattcg gggatgccct
      721 gctggttgcc gtaaaatttg tacggcagga atttcccgga catcgtgatc tggacccggt
      781 cgcccttggg attggcctgg cgctcgatgg cgatgtcgaa gtcgatggcc gacatgatgc
      841 cgtcgccgaa ctcctcctcg atcaaggcct tccaggccgg gccgttgatc atcaccatct
      901 cgtagaagcg gtagatcagc ggatcggtcg gcggcatcgg cgtgcccgtg ccgcgatacg
      961 gcacctcgtt gagcatcgcc tcctcggcag ccgacaggcc gaacagctcg gcggctcgcc
     1021 tcgcctgcgg cttgaccagc ttcatctggc cgagcagggc gccgacgatc agcacgtccg
     1081 acatgccgcc gatctcgtcg cagatcgtgc gccacgtcca gcccttctcg cgcttcaggt
     1141 cgaggatctt ttcggtgagg tcggcacgct tcatctgttg ctcccttgtg cgggatcaaa
     1201 gacggcaagc agcgtgccag agcgcgcccg ccgagccggc tggcggaaat caaggaaacg
     1261 gcgagctctg tggtcgggcg ggcttcggcc gacctgctca cgatgcggac acgagccggc
     1321 gctttccgcc gcttgtttga gcacgccgct catcgttccg ggaaccgccg aggtacggga
     1381 cccggaacga cagcgggtcc gggcgcctta cgcgccctgg cgagcgcgca gcgccggttc
     1441 tggcggctgc tcggcgaggg cgatcctggc gctgcgccgg cgcatcagga gcttggtcgc
     1501 ttccatcacc gccaggagcg tcactgccac catcgtcgcg atcgcccagt cgtgcgcgga
     1561 cagcggcacc gtgtggaacg ccgtctgcag gaccggcacg taaatgacga gcacgtgcat
     1621 gaccagcgac agcagcaccg ccgcaaccag ccacatgttc tccgtcacgc cgccgaaggc
     1681 gctgcgccag ctcgagcggc agttgaaggc gttgaacagc tggaacatca tcagcgtcgt
     1741 gaacgccatc gtgcgtgcgt gggtctcgtc ggcgacattg ggggcactgc ctttcgccag
     1801 cggcgagaag agcccgccgg gataataggc gtcgaggacg gcgagcgtgc cgaccatcat
     1861 cacgccgccg atggccgcga gccgcagcca gtcctcggcg gtgagaacgc ccgtgccgcg
     1921 ctggcgcggg gcgcgcagca tcacgtcggg atccttcggg tcgacgccga gggcaagcgc
     1981 cggcggcccg tcggtgatca ggttgatcca caggagatgc gcggcgagca ggggcaggaa
     2041 cagcccgaca tcggccgaga cgaggccgag caggccggcg aacatcacgc
//
LOCUS       DATAIQ010000617         4032 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_401694, whole genome shotgun sequence.
ACCESSION   DATAIQ010000617 DATAIQ010000000
VERSION     DATAIQ010000617.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4032)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4032)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4032
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_401694"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..104
                     /locus_tag="VHN20_10240"
     CDS             <1..104
                     /locus_tag="VHN20_10240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012331308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA];
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0009254 - peptidoglycan turnover [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="3D domain-containing protein"
                     /protein_id="HEX2726187.1"
                     /translation="ARGDFFFGTGREAGTRAGLLRHEARFVVLLPKP"
     gene            101..673
                     /locus_tag="VHN20_10245"
     CDS             101..673
                     /locus_tag="VHN20_10245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Smr/MutS family protein"
                     /protein_id="HEX2726188.1"
                     /translation="MTWSRRPRRLTPEERRLWAHVARGVTPLDGRSLPAEPAPPASGP
                     EQPPGAGQPVAAEAEAPRPTAQHLPMAALDRRTITALRRGTQQVDGVIDLHGMRQSEA
                     HAALLGFLRRSQDSGRKLVLVITGKGAAGTGDALFAERGVLRRMVPHWLRLPDLRPLV
                     LGFEEAAPQHGGAGALYVRLRRRRTGREPS"
     gene            734..1735
                     /locus_tag="VHN20_10250"
     CDS             734..1735
                     /locus_tag="VHN20_10250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011942563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosine kinase"
                     /protein_id="HEX2726189.1"
                     /translation="MSSQPIDVLTVGNAIVDVIAHTGDDFLARQKLHKGAMQLIDEPR
                     AEELFAMMGPATIVSGGSGANTAVGVASLGARAAFIGKVRDDELGRLYAHDLHAVGVD
                     YAVPPASDGPATARSFILVTPDGERTMNTYLGASQGLGPGDLDPHTVRAARIVYLEGY
                     LWDPPEAKKALRTAATIAQEAGNRVALTLSDPFCVDRYRAEFVELIRRGKVDILFANI
                     HELKSLYQTADEETAVAALREEGILGVVTRSADGALVVTRDATKAVPAHPIAQLVDTT
                     GAGDLFAAGFLAGLANQLGTVDCARLGALAAAEVIQHIGARPQASLRDLARQAGLLS"
     gene            complement(1869..2849)
                     /locus_tag="VHN20_10255"
     CDS             complement(1869..2849)
                     /locus_tag="VHN20_10255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726190.1"
                     /translation="MREPPNDDNNNLELGRSALGRRRRPRPEADQAVLAALATALRDD
                     DKTSSRQTSRREPTIDKSHPQVWRAGLMAAALALIAGGLGWVGGLLAVNSQQDALAVA
                     AARPAWVDPLETSGSAMIEQEARLASVTIDLRETQDSVLRVWNEARSAAAKIEALASN
                     MESIKSDLDGTRTDIARVEDMLRDEDATAVAAAEPEQLGFPDPAEQQAMLARIAQATP
                     QNPQNAAVAQVAETAAATQPATTGALPEAVPAEKPVMAALQKIKRQKRVSGWAVHSVR
                     DDLALVEGHGQHYEVRVGEMLPEAGLVRAIKKYGEQWVVLTNRGYIAEPR"
     gene            complement(2929..3900)
                     /gene="coaA"
                     /locus_tag="VHN20_10260"
     CDS             complement(2929..3900)
                     /gene="coaA"
                     /locus_tag="VHN20_10260"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012336407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004594 - pantothenate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I pantothenate kinase"
                     /protein_id="HEX2726191.1"
                     /translation="MDQRVEPRQPDDDLSPYRSFSRDEWARLRADTPLTLTAGEVARL
                     QSLNDPISLDEVIAIYLPLSRLLSLYVAATQGLFKATQRFLMAEADAKVPYIIGVAGS
                     VAVGKSTTARVLQALLTRWPNTPKVDLVTTDGFLLPNDELTRLGLMERKGFPESYDTG
                     ALLHFLADIKAGKRNVKAPLYSHLIYDVVPGEHTVIDRPDLLIVEGLNVLQPARMPKD
                     GKAIPFVSDYFDFSIYLDATEDDLNRWYGERFLKLRQTAFRDPKSFFRRYADFSEETA
                     IAEAERLWTGINLINLRENIVPTRQRASLILRKGASHRIERVALRRL"
BASE COUNT          614 a         1371 c         1372 g          675 t
ORIGIN      
        1 cggcgcgtgg cgatttcttc ttcggcacgg gtcgtgaggc tggcacccgc gccggcctcc
       61 tacgccacga ggcgcgcttc gtggtccttc tgccgaagcc atgacctggt cgcgccgccc
      121 ccgcaggctc acgccggagg agcgccgcct gtgggcgcat gtggcgcggg gcgtgacgcc
      181 gctcgacggc cgcagcctgc ccgccgaacc agcgccgcca gcgagtgggc cggaacagcc
      241 gccaggcgca gggcagccgg ttgccgccga agctgaggcc cctcgaccga cggcccagca
      301 cctgcccatg gctgcgctcg accgcaggac catcacggcc ttgcgccgcg ggacgcagca
      361 ggtcgacggg gtgatcgatc tccacggcat gcgccagagc gaagcgcacg cggccctgct
      421 cggctttctg cgccgctccc aggacagcgg gcgaaagctc gtgctcgtca tcaccggcaa
      481 gggcgcggcc ggcaccggcg atgcgctctt cgcggaacgc ggcgtgctgc gccgcatggt
      541 gccgcattgg ttgcgtcttc ccgacctgcg gccgctcgtg ctcggcttcg aggaagcagc
      601 gccccagcat ggcggtgccg gcgctctcta tgtgcggctg cgccggcgcc ggacgggccg
      661 cgagccgtcc tgatctgttg accattggcc gggcgggtgc gaaagccggc tcacctgcct
      721 attcagagcc ccaatgtcat ctcagcccat cgacgtcctc acggtcggca atgccatcgt
      781 cgacgtgatc gcccacacag gcgacgattt tctggcccgg cagaagctgc acaaaggcgc
      841 catgcagctg atcgacgagc ctcgggcgga ggaactcttc gccatgatgg gtccggcgac
      901 gatcgtctcg ggcggctccg gcgccaacac cgcggtgggc gtcgcttcgc tcggcgcgcg
      961 ggccgcgttc atcggcaagg tccgcgacga cgagctaggc cgtctctacg cgcatgacct
     1021 gcacgcagtg ggcgtcgact atgcggtgcc accggcgtcg gacggcccgg cgacggcgcg
     1081 cagcttcatc ctggtgacgc cggacggcga gcgcacgatg aatacctatc tcggcgcttc
     1141 gcagggtctc ggtccgggcg acctcgaccc gcacaccgta cgtgcggcgc ggatcgtcta
     1201 tctcgaaggc tatctctggg atccgccgga agccaaaaaa gccctgcgaa cggcagcgac
     1261 gatcgcgcag gaagccggca accgcgttgc cttgaccctg tcggatccgt tctgcgtcga
     1321 ccgctaccgc gccgagttcg tggagctgat caggcgcggc aaggtcgata tcctgttcgc
     1381 caacatccac gagctgaaaa gcctttacca aaccgctgac gaggaaactg ccgtcgcggc
     1441 gctgcgcgag gaaggcatcc tcggcgtggt gacgcggtcg gccgatggcg cgctcgtcgt
     1501 gacgcgcgac gcgaccaagg cggtcccggc gcatccgatc gcacagctcg tcgacacgac
     1561 cggggccggc gatcttttcg ccgcgggctt tcttgccggt ctcgcaaacc agctcgggac
     1621 ggtcgattgc gcccgtctcg gagccctcgc ggccgccgag gtgatccagc atatcggcgc
     1681 gcgcccgcag gcgagcttgc gcgatctcgc gcggcaggcg ggacttctga gctgagggta
     1741 tcggtcgggg cagtcaccca ccggggtggg acggccccct caaaaaaata atccgacgaa
     1801 acgggagtcg ctccgccgga tcacagatgg gaaagctcaa gcgggacggc aggcatcccg
     1861 ctcgcggttc agcgcggctc ggcgatatag ccgcggttgg tcagcacgac ccattgctcg
     1921 ccgtatttct tgatcgcccg gacgagcccc gcctccggca gcatttcgcc gacgcggacc
     1981 tcgtaatgct ggccgtgccc ctcgaccagc gccaagtcgt cacgaacgct gtgcaccgcc
     2041 cagccgctga ccctcttctg ccgcttgatt ttctgcaggg ccgccatgac cggcttctcg
     2101 gccggcacgg cctccggcag cgcaccggtg gtggccggct gcgtcgctgc cgcggtttcg
     2161 gccacctgag ccaccgctgc attttgcggg ttctgaggcg tggcctgcgc gatgcgggcg
     2221 agcatcgcct gctgctcggc gggatccggg aaaccgagct gctcgggctc ggccgcggcc
     2281 accgccgtcg cgtcctcgtc gcgcagcatg tcctcgaccc gggcgatgtc ggtccgcgtt
     2341 ccgtccagat ccgacttgat gctctccatg ttggaagcga gagcttcgat cttggcagcg
     2401 gccgagcggg cttcgttcca gacgcgcagc acgctgtcct gcgtctcacg cagatcgatg
     2461 gtgaccgagg cgagtcgcgc ctcctgctcg atcatcgcgc tgccgctggt ctccagcggg
     2521 tcgacccagg ccgggcgcgc ggcggcgacg gcaagggcat cttgttgcga gttgacggcg
     2581 aggagcccgc cgacccagcc aaggccgccc gcaatcaggg cgagggcagc cgccatcagg
     2641 ccggcccgcc acacctgcgg gtgcgacttg tcgatcgtgg gctcgcggcg cgacgtctgt
     2701 ctggaactgg tcttgtcgtc gtcgcgcagc gctgtcgcga gggcggcgag gaccgcctgg
     2761 tcggcctccg gccggggacg ccggcgcctg ccgagcgcgc tcctgcctaa ttccaaattg
     2821 ttgttgtcgt cgttgggcgg ctcgcgcatg gcgtgaatct ccgaggatca gccaactcaa
     2881 ccgcgctttg tttactaaaa agttaccaca ccgcgaattt cacagatttc acaaccgcct
     2941 gagtgccacg cgctcgatgc gatggctggc tcccttgcgc aggatcaggc tggcgcgttg
     3001 ccgggtcggc acgatgttct cgcgcagatt gatgaggttg atccccgtcc acaggcgctc
     3061 agcctcggcg atcgccgtct cctccgagaa atcggcgtat ctgcgaaaga acgatttcgg
     3121 gtcgcggaac gcggtctgcc gcagcttgag gaagcgctcc ccgtaccagc ggttcagatc
     3181 gtcctcggtg gcgtcgaggt agatggaaaa gtcgaaatag tcggagacga acgggatggc
     3241 cttgccgtct ttcggcatcc gggccggctg cagcacgttg aggccttcga cgatgagcag
     3301 gtcgggccgg tcgatcacgg tgtgctcgcc cgggacgacg tcgtagatca ggtgcgagta
     3361 gagcggcgcc ttgacgttgc gcttgcctgc cttgatgtcg gcgagaaagt gcaggagcgc
     3421 gccggtgtcg tagctttccg gaaacccttt ccgttccatc aggccgagcc gcgtcagctc
     3481 atcgttgggc agaaggaagc cgtcggtcgt cacgaggtcg accttcgggg tgttcggcca
     3541 gcgcgtcagc agcgcctgca ggacacgcgc cgtggtcgac ttgccgaccg ccacggagcc
     3601 ggcgacgccg atgatgtagg gaaccttcgc gtccgcctcg gccatgagaa agcgctgggt
     3661 cgccttgaac agcccctggg tcgcggcgac gtaaagcgaa agaagccgcg acagcggcag
     3721 gtaaatggcg atcacctcgt cgagggagat gggatcgttg agcgattgca ggcgcgcgac
     3781 ctcgccggcg gtgagggtca ggggcgtgtc ggcgcgcagc ctcgcccatt cgtcgcgcga
     3841 aaaggaccga tagggcgaca ggtcgtcgtc gggctgacgc ggttcgactc tctgatccat
     3901 tacgtctctc gccgggcgcc ctggctccgc gccgcctttt cggcaaggcc cgactgggcc
     3961 gtgcgccgct cgagctccgc catcacttcg tccaatggca cgcccccggc tttgagcaca
     4021 atcagcagat gg
//
LOCUS       DATAIQ010000618         1965 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_60783, whole genome shotgun sequence.
ACCESSION   DATAIQ010000618 DATAIQ010000000
VERSION     DATAIQ010000618.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1965)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1965)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1965
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_60783"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(149..520)
                     /locus_tag="VHN20_10265"
     CDS             complement(149..520)
                     /locus_tag="VHN20_10265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726192.1"
                     /translation="MRNLKILSVGAIAALAVAGTGASAQAPQDGAWKLEIHTQRGECE
                     PLYRYYIVIEGRAVHLRSAFGETSGPLGQLRADGRVDATLGDSDDPVSVKGRLGASSG
                     AGTWSAPARRCAGRWSAEKRA"
     gene            complement(542..913)
                     /locus_tag="VHN20_10270"
     CDS             complement(542..913)
                     /locus_tag="VHN20_10270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726193.1"
                     /translation="MKHSLFGVAAFGLGLACVPAAVQAQQGYNGRWSVEIVTERGECD
                     RAFRYPVIVENGRIRYGGDAGGFNLSGQIAPNGAVRVSITSGQGRADGTGKIAGSSGG
                     GTWKISGSRACSGHWNAEKRS"
     gene            complement(1061..1483)
                     /locus_tag="VHN20_10275"
     CDS             complement(1061..1483)
                     /locus_tag="VHN20_10275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726194.1"
                     /translation="MRRALCSINRLGCRLGLLAFGFVGLGVDARAAETSRFNGAWHVQ
                     MTKQSGLCDRDHRYAILIREGDIRYLPEPGSSPMNFTGQVDGRGSVQINASRGPAQVG
                     AVGQLQGNSGSGTWRLPLLGCSGVWTAQRTSRVQTSSN"
     gene            complement(1615..>1965)
                     /locus_tag="VHN20_10280"
     CDS             complement(1615..>1965)
                     /locus_tag="VHN20_10280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase"
                     /protein_id="HEX2726195.1"
                     /translation="PPAGFTARAAFAKNFFEAGGIEAVTNDGFTSPEEMLQAFTASGA
                     RLACICASDSVYESLAVPAAKALLSRGARRLYVAARPDGLQEQLKDASVSEYIFAGCD
                     ALAILETAVRDASV"
BASE COUNT          332 a          684 c          655 g          294 t
ORIGIN      
        1 acttacgcgt ttgtcatcac cggccttgtg ccggtgatct cgatcggaag aacgccgcgc
       61 ccttccgatc gggatggccg tacccggatc ggcgctccgc gccgtccggg cactaaggga
      121 caccaagccc ggccatgaca ggaccgcgct acgcccgctt ctcggcgctc cagcggccgg
      181 cgcagcggcg cgccggggcg gaccaggtgc cggcgccgga actggcgccg aggcggccct
      241 tgacgctgac cggatcgtcg ctgtcgccga gagtggcgtc gacgcggccg tcggcgcgca
      301 gctggccgag cggcccggag gtctcgccga aggccgagcg caggtgcacg gcgcgcccct
      361 cgatgacgat gtaatagcgg tagagcggct cgcattcgcc gcgctgcgtg tggatctcga
      421 gcttccaggc gccgtcctgc ggcgcctggg ccgacgcgcc ggtgcccgca acggcgagcg
      481 ccgcgatcgc gccgaccgag aggatcttga ggttacgcat cgaaagacgc cgcacgccga
      541 ctcaactccg cttttccgcg ttccagtggc ccgagcaggc gcgcgagccc gaaatcttcc
      601 aggtgccgcc gccggagctg ccggcgatct tgccggtgcc gtcggcacgc ccctggccgc
      661 tcgtgatgct gacgcggacg gcgccgttgg gcgcgatctg gccggacaaa ttgaacccgc
      721 ccgcgtcgcc gccgtagcgg atgcggccgt tctcgacgat caccggatag cggaaagcgc
      781 ggtcgcactc gccgcgctcg gtgacgattt cgacgctcca gcggccgtta tagccctgct
      841 gcgcctgcac cgccgccggc acgcatgcaa gcccgagccc gaacgcggcc acaccgaaga
      901 gggaatgttt catctgctgc tcccacgctg ccggcaggac aacgcgtgga acccgcgttt
      961 cgacgacctc gcggggcaaa aaagctttgc tgcccgcatg atccggcgaa gtggatacca
     1021 cttcgccgac aagattatgc ggcatcaggc gacagcggcc tcagttcgac gaggtctgca
     1081 cgcgcgatgt gcgctgcgcc gtccacacgc ccgagcagcc gagcagcggc agccgccacg
     1141 tgccggagcc cgagttgccc tgcagctggc cgaccgcgcc gacctgggcc ggcccgcgcg
     1201 acgcgttgat ctgcacgctg ccgcggccgt cgacctgccc ggtgaaattc atcggcgagc
     1261 tgcccggctc gggcaggtag cggatgtcgc cctcgcggat caggatggcg taacggtggt
     1321 cgcggtcgca caggccggat tgcttggtca tctgcacgtg ccaggcgccg ttgaagcgcg
     1381 acgtttcggc cgcgcgcgcg tcgacgccga gcccgacgaa accaaaggca agcaggccaa
     1441 ggcgacagcc aagccgattg atgctgcaaa gagctcgccg catcacatct ctcccaagct
     1501 taaagcatga tccggcgaag tggcgaccac ttcgccgaca cgatcatgcg acacaagaac
     1561 ttgagcagga tcgtcgcaag tcgcagcgct cctgcccgag ccggggaacg cgcttcaaac
     1621 cgaggcgtcc ctgaccgcgg tttcgagaat ggcgagcgcg tcgcaaccgg caaagatata
     1681 ctcgctaacg ctggcgtctt tgagttgttc ctggaggcca tcgggcctcg cagctacgta
     1741 aaggcgcctc gcgccgcgcg acagcaaagc ttttgccgcc ggaaccgcta agctttcgta
     1801 aacgctatcg gatgcgcaga tgcacgcaag cctggcgccg gacgccgtga atgcttgcag
     1861 catctcctcc ggcgatgtga agccgtcatt cgtcacggct tcgatgccac cggcctcgaa
     1921 gaaattcttg gcgaaggcgg cgcgcgccgt gaagcccgcg ggcgg
//
LOCUS       DATAIQ010000619         1863 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_309681, whole genome shotgun sequence.
ACCESSION   DATAIQ010000619 DATAIQ010000000
VERSION     DATAIQ010000619.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1863)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1863)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1863
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_309681"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            142..1143
                     /locus_tag="VHN20_10285"
     CDS             142..1143
                     /locus_tag="VHN20_10285"
                     /inference="COORDINATES: protein motif:HMM:NF014893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEX2726196.1"
                     /translation="MIHAAIAGLGWWGKHMVRRMAHSEALRIVKAVEANPALGGFAAE
                     HGLTFTTSFADALKDPALDAVILCTPHSMHTEQVLAAAAAGKHVFCEKPLALKRADAE
                     RSVKACRDAGVVLGIGHERRFEPAIQEVRRLVTEGALGTIMHVEANFSHDKLANVPEG
                     DWRASPKDAPAAGMTAMGIHLTDLFGYLFGPVSEVYAATTSRVAYKQTGDVISAQMRF
                     ASGATGYLNAILVTPLYITFTVFGSEAWAEIRNHTHPDTPGPTTLTVQYRDGRRDTRD
                     YEWTDTVKANLENFASAVKGKGEYLFTDAQKIGNVAVLEAVTTSVASNAPVPVAPVT"
     gene            complement(1228..>1863)
                     /gene="maiA"
                     /locus_tag="VHN20_10290"
     CDS             complement(1228..>1863)
                     /gene="maiA"
                     /locus_tag="VHN20_10290"
                     /EC_number="5.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012383572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016034 - maleylacetoacetate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006559 - L-phenylalanine catabolic process
                     [Evidence IEA];
                     GO_process: GO:0006572 - tyrosine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="maleylacetoacetate isomerase"
                     /protein_id="HEX2726197.1"
                     /translation="NLKGLAAEETMIELMAGQQRAPEYRAVNPQMVLPALVDGDGPAL
                     FQSLAILEYLDERHPRPPLLPSDARGRARVRGLAQIVACDAHPLIVPRIREYLAEQFG
                     LDEAQRLAWIRHWIGAGLGAIEQHLARESETGRYCHGDAVTIADICLVSLAVGNTLFQ
                     GDFREFPTVSRIVDTCLAEEAFARAHPLRQPGAPRETSPQRGEVESAKRTG"
BASE COUNT          318 a          638 c          641 g          266 t
ORIGIN      
        1 ctgatcttca gcgccggcaa atactgcacg cattcgctgc tcgccgacgc cgtctgacgg
       61 cctccttctc gcaggcggcg gaggagcatg ccgcgccgcc aggacccccc gcgccagcgc
      121 aacacgaaca ggaacgagaa catgatccac gccgcaatcg ccggactcgg ctggtgggga
      181 aagcacatgg tgcggcgcat ggcccattcg gaggccttgc gcatcgtcaa ggcggtcgag
      241 gccaatccgg cgctcggagg cttcgcggcc gagcacggcc tcaccttcac caccagcttc
      301 gccgacgcgc tcaaggatcc cgccctcgac gcggtgatcc tgtgcacgcc gcactcgatg
      361 cataccgagc aggtcctggc ggccgcggcc gccggcaagc acgtgttctg cgagaagccg
      421 ctggcgctca agcgcgccga cgccgaacgc tcggtcaagg cctgccgtga tgcgggcgtc
      481 gtgctcggca tcgggcatga acggcgcttc gagccggcca ttcaggaagt gcggcggctc
      541 gtgaccgagg gcgccctcgg cacgatcatg catgtcgagg ccaatttcag ccacgacaag
      601 ctcgccaacg tgccggaggg cgactggcgc gcctcgccca aggacgcgcc ggcggccggc
      661 atgaccgcga tgggcatcca tctcaccgac ctgttcggat acctgttcgg cccggtcagc
      721 gaggtctacg ccgcgaccac gagccgggtc gcctacaagc agaccggcga cgtgatctcg
      781 gcgcagatgc gcttcgcatc aggcgccacg ggttatctca acgccatcct ggtgacgccg
      841 ctctacatca ccttcacggt gttcggctcg gaggcgtggg cggagatccg caaccacacc
      901 catcccgaca cgcctggccc gacgacgctc acggtgcagt atcgcgacgg ccgccgcgac
      961 acgcgcgact atgagtggac cgacacggtc aaggccaatc tcgagaattt cgccagcgcc
     1021 gtgaaaggaa agggcgaata cctgttcacc gacgcacaga agatcggcaa cgtcgccgtg
     1081 ctcgaggcgg tcacgacctc cgtcgccagt aacgcgccgg tgccggtggc gccggtaacc
     1141 tgacgtcaga taacggcgcg aatcctctcc gcagcgggga gaggataggg tgagggggag
     1201 cgccctctcc ggagaaggcg gtccccctca cccggtccgc ttcgcggact cgacctctcc
     1261 ccgctggggc gaggtttcgc gcggcgcgcc gggctggcgc agcgggtggg cgcgggcgaa
     1321 ggcctcctcc gcgaggcacg tgtcgacgat gcgcgaaacg gtcgggaact cgcgaaaatc
     1381 cccttggaag agcgtgttgc cgaccgcgag gctgacgagg cagatatcgg cgatcgtcac
     1441 cgcgtcgccg tgacaatagc ggccggtctc ggactcgcgc gcgagatgct gttcgatcgc
     1501 gccgaggccg gcgccgatcc agtggcggat ccaggcgagg cgctgggcct cgtcgaggcc
     1561 gaactgctcg gccaggtatt cgcggatgcg cggcacgatc aggggatggg catcgcaggc
     1621 gacgatctgg gcgaggccgc gcacgcgggc acggccgcgg gcatccgacg gcagcagcgg
     1681 cggccgggga tgacgctcgt cgagatattc caggatggcg agggactgga acaaggccgg
     1741 gccgtcgccg tcgaccagcg cgggcaggac catctgcggg ttgaccgccc gatactccgg
     1801 tgcgcgctgc tggcccgcca tcagttcgat catggtctct tcagccgcga gccctttcag
     1861 gtt
//
LOCUS       DATAIQ010000620         2261 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_337380, whole genome shotgun sequence.
ACCESSION   DATAIQ010000620 DATAIQ010000000
VERSION     DATAIQ010000620.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2261)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2261)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2261
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_337380"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1383)
                     /locus_tag="VHN20_10295"
     CDS             complement(<1..1383)
                     /locus_tag="VHN20_10295"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008196386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclopropane-fatty-acyl-phospholipid synthase
                     family protein"
                     /protein_id="HEX2726198.1"
                     /translation="MKLADRLEGLRRFVEQRGERAGFDAQDRLRSLRQLLAHARERTG
                     IELGFVLWDGSTVPQDLAANGLAVVIADEGAVAALVRRPKLETIASLWVTKRIDIRGG
                     TLFDLAAERPKLRTREIRKNLDKKLLLTTLAKFLPVHRGGPWPLEDVPDEPPAGGDAR
                     KAKKNIAYHYDVSNRFYALWLDSEMVYSCAYFPRGDATTLEEAQVAKLDMICRKLRLA
                     EGERFLDIGCGWGGLVCHAARNYGVRAHGITLSEAQLELARAKVARLGLADRVTLELK
                     DFRSLDGEYDKIASVGMFEHVAPDQHAAYFTRMRALLRPGGIYLHHAITRPAKRARLL
                     RRRKRPEFALLTKFIFPGGELDHIGGSVASLERFGFEVHDVEGWREHYQRTCRHWHDR
                     LLASYDAAVAEVGEIKTRMWLVYLAACSIAFERNTVGLFQTVASTRRRGPSGLPPTRE
                     DLYKKNLLQGG"
     gene            complement(1411..1644)
                     /locus_tag="VHN20_10300"
     CDS             complement(1411..1644)
                     /locus_tag="VHN20_10300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017482626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1674 domain-containing protein"
                     /protein_id="HEX2726199.1"
                     /translation="MNDAQGTRSLSSVAVEGGERSARRLSPAAQRALAEAAARRAEID
                     ARAAALPPEHGARREREPVRYGDWEAKGIASDF"
     gene            1749..>2261
                     /locus_tag="VHN20_10305"
     CDS             1749..>2261
                     /locus_tag="VHN20_10305"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007607011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metalloprotease"
                     /protein_id="HEX2726200.1"
                     /translation="MNYVKTAMLLAALTALFGVVGYLLGGPTGMLIALGIAVVTNLFA
                     YWNSDKLALSAHGAVEVDERTAPELVGMVRQLSGRAGLPMPRVYLIDNPQPNAFATGR
                     NPANAAVAATTGIMEMLTYEELAGVMAHELAHIKNRDTLIMTVSATIAGAISTIAQFG
                     FLFGGRDGERP"
BASE COUNT          340 a          759 c          796 g          366 t
ORIGIN      
        1 tcccccttgg agaaggtttt ttttgtacaa atcctcgcgg gtcggcggga ggcccgaggg
       61 tccgcggcgg cgcgtcgacg cgacggtctg gaacaggccg accgtgttgc gctcgaaggc
      121 gatcgagcag gccgcgagat agacgagcca catgcgcgtc ttgatctcgc cgacctcggc
      181 aacggccgcg tcgtaactgg ccagcaggcg gtcgtgccag tggcggcagg tgcgctggta
      241 atgctcgcgc cagccttcca cgtcgtgcac ctcgaagccg aagcgctcga ggctcgcgac
      301 cgatccgccg atgtggtcga gctcgccgcc ggggaagatg aacttcgtca gcagcgcgaa
      361 ttcgggccgc ttgcgccggc ggagcagccg cgcccgcttg gccgggcgcg tgatggcatg
      421 atgaaggtag atcccgcccg ggcgcagcag cgcgcgcatc ctggtgaaat aggcggcgtg
      481 ctgatccggc gcgacgtgct cgaacatgcc gacggaggcg atcttgtcgt attcgccgtc
      541 gagcgagcgg aagtccttga gctcgagggt gacccggtcc gcgagcccaa gccgggccac
      601 cttggcccgt gccagctcga gctgcgcctc ggacagggtg atgccgtgcg cccgcactcc
      661 gtagttgcgc gcggcgtggc agacgaggcc gccccagccg cagccgatat cgaggaagcg
      721 ctcgccttcc gcgagacgca gcttgcggca gatcatgtcg agcttggcga cctgcgcctc
      781 ttcgagggtc gtggcgtcac cgcgcggaaa ataggcgcag gaatagacca tctcggagtc
      841 gagccagagc gcgtagaatc tgttggagac gtcgtagtgg taggcgatgt tcttcttggc
      901 tttgcgcgcg tcgccgcccg ccggcggctc gtcggggacg tcttcgagcg gccacggccc
      961 gccccggtgc acaggcaaga acttggcgag ggtcgtgagc agcagcttct tgtcgagatt
     1021 cttgcggatc tcgcgcgtgc gcagcttcgg ccgctcggcg gcgaggtcga acaaggtgcc
     1081 gccgcggata tcgatgcgtt tcgtgaccca caggctggcg atggtctcga gcttcggtcg
     1141 acgcaccagg gcggcaacgg cgccttcgtc ggcgatgacg acggccaggc cgtttgctgc
     1201 gaggtcctgg ggaaccgtcg agccgtccca gagaacgaag ccgagctcga ttccagtgcg
     1261 ctcgcgggcg tgcgccagca gttgtcgcag cgagcggaga cgatcctgcg cgtcgaagcc
     1321 ggcgcgctcg ccgcgctgct cgacgaaacg tctgagccct tccagccggt ctgcgagctt
     1381 cacgagcggc ctcggtggtt ggcaggcacg tcagaaatcg gacgcgatgc ccttggcttc
     1441 ccagtcgccg tagcgcacgg gctcgcgttc acggcgggcc ccatgctccg ggggcagggc
     1501 ggcggcgcgg gcgtcgatct cggcccggcg cgcggccgcc tcggccaggg cgcgctgcgc
     1561 cgcgggcgac aggcggcgcg cactgcgctc cccgccctcc accgcgacgg acgagagcga
     1621 tcgggtgccc tgcgcatcgt tcatcatcgc ggctttcgat catttccggt gcaaggggtc
     1681 aagccatccc ttgcgaaccg cgtcccgggt cccaacgttt cccatggcca agtttcgcga
     1741 gttggacgat gaactacgtc aagaccgcca tgctccttgc cgcgctcacg gccctgttcg
     1801 gggtcgtcgg ctacttgctc ggcgggccga ccggcatgct gatcgcgctc ggcatcgcgg
     1861 tcgtcaccaa cctgttcgcc tactggaact cggacaagct ggcgctctcg gcgcacggcg
     1921 cggtcgaggt cgacgagcgc acggcgccgg agctcgtcgg catggtgcgc cagctcagcg
     1981 ggcgcgccgg attgccgatg ccgcgcgtct acctgatcga caacccgcag ccgaacgcct
     2041 tcgcgaccgg gcgcaatccc gcgaacgccg ccgtcgccgc gaccaccggc atcatggaga
     2101 tgctcaccta tgaggagctc gccggcgtga tggcgcacga gctggcgcat atcaagaacc
     2161 gcgacacgct gatcatgacc gtgtcggcga cgatcgccgg agcgatctcg acgatcgccc
     2221 agttcggctt cctgttcggc ggccgtgacg gcgagcgccc g
//
LOCUS       DATAIQ010000621         1551 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_447779, whole genome shotgun sequence.
ACCESSION   DATAIQ010000621 DATAIQ010000000
VERSION     DATAIQ010000621.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1551)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1551)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1551
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_447779"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(8..1264)
                     /gene="ftsA"
                     /locus_tag="VHN20_10310"
     CDS             complement(8..1264)
                     /gene="ftsA"
                     /locus_tag="VHN20_10310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017979577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043093 - FtsZ-dependent cytokinesis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HEX2726201.1"
                     /translation="MRASDAPPLIGALDIGSSKVSALVCTTDEEGRLRVLGTGQRQSR
                     GVKRGFVTDMEATEVAVREAVEQAERMSGQTIEDVWAGFGAGGLSSDLATVEVEIGGH
                     QVEQSDVEELLVSGRHAVDRPSQVVLHANPALYAIDEVQGVRNPVGMHASRLGVDIHV
                     IAADEAPLRNVDLTIRQAHLGVRAIVASPVAAALACLSPEERDLGVALVELGAEVTNV
                     SLHAGGMLVGLRSIPLGAKDITDDIAAAFGVRRRDAERIKCFHGSAMTSPRDNHEVVE
                     ALPIGAEDGSEPLRISRAQLMTVIRQRVEQITAEVESALKDLGFVKPVGRQVVLTGGG
                     AELKNIADYMQGVLGRAVRVGRPRQITGLPDAHSGSAFATLVGLAMLAGQGSGDIRDL
                     ALPTAKRDKPVTGLFARLVETIRGRG"
     gene            complement(1264..>1551)
                     /locus_tag="VHN20_10315"
     CDS             complement(1264..>1551)
                     /locus_tag="VHN20_10315"
                     /inference="COORDINATES: protein motif:HMM:NF015739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0043093 - FtsZ-dependent cytokinesis
                     [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsQ/DivIB"
                     /protein_id="HEX2726202.1"
                     /translation="MIDGVPTLKPQLASASWIGGRRWDLNFTTGEIVSLPEGEKPASK
                     ALQRFAKMDRSVGLLGRQMIRFDLRVPGKMIVRVPPGSEPAPVGTTQEVAG"
BASE COUNT          247 a          560 c          507 g          237 t
ORIGIN      
        1 gggacaatca gccccgcccg cggatggtct cgaccagacg cgcgaagagc ccggtaacgg
       61 gcttgtcgcg cttggcggtg ggcagtgcga ggtcgcggat gtcgccgctt ccctgccccg
      121 ccagcatggc caggccgacc agcgtcgcga acgccgaacc actgtgcgca tccggcaagc
      181 ccgtgatctg gcgcggacgg ccgacccgca ccgcgcgccc gagcacgccc tgcatataat
      241 cggcgatgtt cttgagctcc gcgccgccgc cggtcagcac cacctggcgt ccgacgggct
      301 tcacgaagcc gagatccttc agcgcgctct ccacctcggc ggtgatctgt tcgacgcgct
      361 ggcggatcac cgtcatgagc tgcgcgcggg agatgcggag cggttcgctt ccatcctcgg
      421 cgccgatcgg cagcgcttcc accacctcat gattgtcgcg cggcgaggtc atggccgagc
      481 cgtggaagca cttgatccgc tcggcatcgc ggcggcgcac gccgaacgcg gcggcgatgt
      541 cgtcggtgat gtccttggcg ccgagcggga tcgagcggag cccgaccaac atgccaccgg
      601 catgaagcga gacgttggtg acttccgcgc ccagctcgac cagcgctacg ccgaggtccc
      661 gctcttccgg gctgaggcaa gcaagcgccg ccgccaccgg cgaggcgacg atggcgcgga
      721 cgcccagatg cgcttggcgg atggtaagat cgacgttgcg cagcggcgcc tcgtcggcgg
      781 cgatgacgtg gatatcgacg ccgagccggc tggcatgcat acccaccgga ttacgaacac
      841 cctgcacctc gtcgatcgcg taaagcgccg ggttggcgtg aagcaccacc tgcgacgggc
      901 gatccaccgc atggcgaccg ctgacgagca actcctcgac atctgattgc tcgacctgat
      961 ggccgccgat ctccacctcg acggtggcga gatcgctcga cagcccgccg gcaccgaagc
     1021 cggcccacac gtcctcgatc gtctggccgc tcatccgctc ggcttgctcg accgcttcgc
     1081 ggaccgcgac ctcggtcgct tccatgtcgg tgacgaagcc tcgcttgacc ccgcggctct
     1141 ggcgctggcc ggtgcccagc acgcgcagcc gcccttcctc gtcggtggtg cagaccagcg
     1201 ccgaaacctt cgaggaaccg atgtcgaggg cgccgatcag cggcggcgcg tcgctggccc
     1261 gcatcagccg gccacttctt gagtggttcc gaccggcgcc ggctccgagc cgggcggaac
     1321 ccggacgatc atcttgcccg gcacgcgaag gtcgaagcga atcatctgcc gaccaagcag
     1381 gcctaccgac cgatccatct tggcgaagcg ctgcagcgcc ttggacgccg gcttctcacc
     1441 ctcgggaagg gagacgatct cgccagtggt gaagttcaga tcccaccggc gtccgccgat
     1501 ccagctggcc gatgcgagct gcggcttcag cgtcggcacg ccatcgatca t
//
LOCUS       DATAIQ010000622         2743 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_402131, whole genome shotgun sequence.
ACCESSION   DATAIQ010000622 DATAIQ010000000
VERSION     DATAIQ010000622.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2743)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2743)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2743
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_402131"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..510
                     /locus_tag="VHN20_10320"
     CDS             <1..510
                     /locus_tag="VHN20_10320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018699218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX2726203.1"
                     /translation="DKPAPVRRVVTGHDEDNIAKVLIDGEATNRKSSRPGNVSTLIWS
                     TDATPADISVGEDVEDLGARILGTAPPPLGTRFTVNDIAPGNQGVMHRTETLDYVIVL
                     SGELDMEMDDSTVKLKAGDVMVQRGTNHAWINRGTETARVAFVLIDAKPLGIGKPLTG
                     MATNKTGPR"
     gene            complement(742..1701)
                     /locus_tag="VHN20_10325"
     CDS             complement(742..1701)
                     /locus_tag="VHN20_10325"
                     /EC_number="1.1.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018259695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase"
                     /protein_id="HEX2726204.1"
                     /translation="MPTVAIVGAGLIGRSWAIVFARAGWDVQITDPSAEQLAALPRLI
                     RQGLGELQAHGLVRDAEAAAQRVSPAASIEEAVRGAELVQENGPEVVATKREIFAELD
                     RLAPKDAVLASSTSAIVASQFTGDLAGRERCLVAHPVNPPHLVPLVELCGAPWTTPET
                     IAAARRAYAAVGQVPIVVNREIEGFVLNRLQGALLAEAFRLAGEGIVSPQDLDKTLSD
                     GLGLRWSFMGPFETIELNAPGGIGDYCARYGAFYRRLSTDAAKPEVWDDANVARILEA
                     WGGPVDPRGVSAKSAWRDARLAALRAHKAEQNPLPEGEVESPR"
     gene            complement(1824..>2743)
                     /locus_tag="VHN20_10330"
     CDS             complement(1824..>2743)
                     /locus_tag="VHN20_10330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012334372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX2726205.1"
                     /translation="ISADLPVLLVEHDIDRVFQIADAVTVMNEGRVLVDGSVEDARSN
                     ARVQEVYIGSGTATVAAKPRESAAEAQTLLAVDQVHTFYGKSHILADVTFDVHKHEIL
                     ALLGRNGAGKSTLLKTLIGIAPPASGSIKLAGQEIAGRPSDEIARLGIGYVPQGRGLF
                     AGMTVAQNLELGRLRRQTGTGLRWDLERIFEYFPRIRERLDQPADYLSGGEQQMVAVA
                     RALSGDVRVLLLDEPFEGLAPAIIEQLFESFDRLRHEVSIIIVDHHLDLALALSDRTV
                     ALERGRVIHTGPSKDLRDNLALRRKVLWL"
BASE COUNT          453 a          957 c          912 g          421 t
ORIGIN      
        1 gataaaccgg ctccggtgcg ccgcgtcgtc acgggccacg acgaggacaa catcgccaag
       61 gtgctcatcg acggcgaggc gaccaacagg aagtcgtcac gccccggcaa tgtctcgacg
      121 ctgatctggt ccaccgatgc cacgcccgcc gacatctcgg tcggcgagga cgtcgaggat
      181 cttggcgcgc gtatcctggg cacggcgccg ccgccgctcg gcacgcgctt caccgtcaac
      241 gacatcgccc ccggcaatca gggcgtgatg caccgcaccg agacgctcga ctacgtgatc
      301 gtgctgtcgg gcgagctcga catggagatg gacgactcga ccgtgaagct caaggccggc
      361 gacgtaatgg tccagcgcgg caccaaccac gcctggatca accgcggtac cgagaccgcg
      421 cgcgtcgcct tcgtgctgat cgacgcaaaa ccgctcggca tcggcaagcc gctcaccggc
      481 atggccacga acaagaccgg gccgcgataa gaaacgctcc cagagtgaga ggtcgagtct
      541 gcggagcaga ccgggtgagg ggtgcgacct caccgcgaac acgccgcagc agcaacggaa
      601 cggcctcttc tagagcggga tcaatgcaga ttgaatcgat cccgctctat tttgagccgc
      661 atgatctttt tcggcgacgc ggtatccact tcgccgcatc atgctctaat gcccggtcgg
      721 cctcccctca cccggtcgcc gctaccgcgg cgactcgacc tctccctccg ggagagggtt
      781 ttgctccgcc ttatgcgcgc gcaacgcggc aagccgcgcg tcgcgccagg cgcttttcgc
      841 ggacaccccg cgcgggtcga ctggtccgcc ccaggcctcg aggatgcgcg ccacgttggc
      901 gtcgtcccac acctcgggct tcgccgcgtc ggtgctgaga cgccggtaga atgcgccgta
      961 gcgcgcgcaa taatcgccga tgccgccggg cgcgttgagc tcgatggttt cgaacgggcc
     1021 catgaacgac cagcgcaatc cgagaccatc gctcagcgtc ttgtcgagat cctgcgggct
     1081 gacgatgccc tcccccgcca accggaacgc ctcggcgagc agggccccct gcagccggtt
     1141 gagcacgaag ccctcgatct cgcgattgac cacgatcggc acctgtccga ccgccgcata
     1201 ggcgcggcgc gccgcggcga tcgtctccgg cgtggtccac ggcgcgccgc acagttcgac
     1261 cagcggcacg aggtgcggcg ggttgacggg atgcgcgacg aggcagcgct cgcgcccggc
     1321 gaggtccccg gtgaattgcg aggcgacgat cgccgaggtc gacgacgcga gaaccgcgtc
     1381 cttgggcgcg aggcggtcga gctcggcaaa gatctcgcgc ttggtggcga ccacctccgg
     1441 gccgttctcc tggacgagct cggcgccgcg caccgcctcc tcgatcgaag ccgccggcga
     1501 tacgcgctgg gccgcggctt cggcgtcgcg gacgaggccg tgcgcctgca gctcgccgag
     1561 cccttgccgg atcaggcgcg gcagcgcggc cagctgctcg gcgctgggat cggtgatctg
     1621 cacgtcccag ccggcgcgcg cgaacacgat cgcccatgat cggccgatca gcccggcgcc
     1681 cacgatcgca acggtcggca tgtctgtctc cttcggaact aggaatggca aatgacgaac
     1741 catcggcaat aggcagtcgg cagtcggtta tctgcggtga tcggctgccg attgcccact
     1801 gccgactgcc tactgccgtt ccatcacagc cacagcacct tgcggcgcag ggcgaggttg
     1861 tcgcgcaggt ccttggacgg ccctgtgtgg atgacgcggc cgcgctccag cgcgacggtg
     1921 cggtccgaca gcgccagggc gaggtcgaga tgatgatcga cgatgatgat cgacacctcg
     1981 tggcgcagcc gatcaaagct ttcgaacagc tgctcgatga tggccggcgc cagcccctcg
     2041 aacggctcgt cgagcagcaa gacgcgcacg tcccccgaca gggcccgcgc cacggccacc
     2101 atctgctgct cgccgcccga caggtagtcg gccggctggt cgagccgttc gcggatgcgc
     2161 gggaaatatt cgaagattcg ttccaggtcc cagcgcaggc ccgtgccggt ctggcggcgc
     2221 aggcggccca gctcgagatt ctgggcgacg gtcatgccgg cgaacagccc cctcccctgc
     2281 gggacgtaac cgatccccag gcgcgcgatc tcgtcggacg ggcggccggc gatctcctgc
     2341 cccgcgagct tgatcgagcc cgatgccggc ggcgcgatgc cgatgagggt cttgagcagt
     2401 gtcgacttgc cggcgccatt gcggccgagc agcgccagga tttcatgctt gtgcacgtcg
     2461 aaggtgacat ccgccaggat gtggctcttg ccgtagaagg tgtggacctg atcgacggcc
     2521 agcagcgtct gcgcctcggc ggcgctttcg cgcggcttgg ccgcgacggt cgccgtgccg
     2581 gagccgatat agacttcctg cacgcgcgca ttcgagcgcg cgtcctcgac cgagccgtcg
     2641 accagcaccc tgccttcgtt catcaccgtg acggcgtcgg caatctggaa gacgcggtcg
     2701 atgtcgtgct cgacgagcag cacgggaaga tcggccgaga tgc
//
LOCUS       DATAIQ010000623         1728 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_199572, whole genome shotgun sequence.
ACCESSION   DATAIQ010000623 DATAIQ010000000
VERSION     DATAIQ010000623.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1728)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1728)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1728
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_199572"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..277
                     /locus_tag="VHN20_10335"
     CDS             <1..277
                     /locus_tag="VHN20_10335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015950402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF4159 domain-containing protein"
                     /protein_id="HEX2726206.1"
                     /translation="WVEALPPASETERRPARAGDGVSPIIITSNDLAAAWAVGRRGEA
                     LYPVIGSDPRQREMAFRSGVNIVMYALTGNYKADQVHVPALLERLGQ"
     gene            388..>1728
                     /locus_tag="VHN20_10340"
     CDS             388..>1728
                     /locus_tag="VHN20_10340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012334213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726207.1"
                     /translation="MLTVSFSPLVPQAVLWALAALVAVFAVLALVSRGPVAIVRALAL
                     ALLLGALANPSLIQEDRERVKDIVAVIVDRSTSQTLGERPGMTDRVRADLQRRLAGLP
                     DVETRFIDAGDGQGDDGTRLFSALSNALADVPPDRLAGVLMVTDGVVHDVPASSELLG
                     FRAPLHALITGRANERDRQIKLLQAPRFGIVGREQIIRGQIMERGGPGTATVTVRRDG
                     QQVIRQPVRTGVPFSLNVRIEHGGPNVVEIEAEALPDELTTANNRAVVTIEGIREKLR
                     VLLVSGEPHPGERTWRNLLKSDANVDLVHFTILRPPEKQDGTPINELSLIAFPTRELF
                     QQKIKEFDLIIFDRYANQSVLPSTYFENIVRYVREGGAVMVAAGPEFASPSSLARTRL
                     SPIIPGNPDGRIVETPYKARITNPGERHPVTRGLPGSEASPPAWGEWLRVIGAHV"
BASE COUNT          249 a          610 c          589 g          280 t
ORIGIN      
        1 ctgggtcgag gcgctgccgc ccgcctcgga gacggagcgc cgcccggcgc gcgccggcga
       61 cggcgtctcg ccgatcatca tcacctcgaa cgatctggcc gccgcgtggg cggtcgggcg
      121 gcgcggcgag gcgctctacc cggtgatcgg cagcgatccg cgccagcgcg agatggcctt
      181 ccgcagcggc gtcaacatcg tgatgtacgc cctgaccggc aactacaagg ccgaccaggt
      241 gcacgtgccc gctctgctcg agaggctcgg gcaatgactt ggcagtcggc agtgggcaat
      301 cggcagtcgg aaatttgcgc gagcgactgc cgactgccaa ttgccgactg ccggtggcga
      361 gtcccggaat gacataggat tgttcgtttg ctgactgtca gtttctcgcc gctcgttccg
      421 caggccgtgc tctgggccct tgcggctctc gtggctgtgt tcgccgtgct cgcgctcgtc
      481 tcacgcgggc ccgtggcgat cgttcgcgcg ctcgcgctcg ccttgcttct cggcgcgctc
      541 gccaacccgt cgctgatcca ggaggaccgg gagcgggtga aggacatcgt ggcggtgatc
      601 gtcgaccgct cgacgtcgca gacgctcggc gagcgcccgg ggatgaccga ccgtgtgcgc
      661 gccgacctgc agcgccgcct cgccggcttg ccggatgtgg aaacccgctt catcgacgcg
      721 ggcgacggcc agggcgatga cggcacgcgc ctgttctcgg ccttgtcgaa tgccctcgcc
      781 gacgtcccgc cggatcgtct tgccggcgtg ctcatggtca ccgacggcgt cgtgcacgac
      841 gttcccgcgt cgagcgagct gctcggcttc cgcgcgccgc tgcatgcctt gatcacgggc
      901 cgcgccaacg agcgcgaccg gcagatcaag ctgctgcagg cgccgcgttt cggcatcgtc
      961 ggccgcgagc agatcatccg cggtcagatc atggagcggg gcgggcccgg cacggcgacg
     1021 gtgacggtgc gccgcgacgg gcagcaggtg atccggcagc cggtgcgcac gggcgtgccg
     1081 ttctcgctga acgtgcgcat cgagcatggc ggcccgaacg tcgtcgagat cgaggccgag
     1141 gcgctgccgg acgagcttac caccgccaac aaccgcgccg tcgtcaccat cgagggcatc
     1201 cgcgagaagc tgcgcgtgct gctcgtgtcc ggcgagccgc atcccggcga gcgcacgtgg
     1261 cgcaacctcc tcaagtcgga cgccaacgtc gatctcgtcc atttcaccat ccttcgcccg
     1321 cccgagaagc aggacggcac gccgatcaac gagctctcgc tgatcgcctt tccgacccgc
     1381 gagctgttcc agcagaagat caaggaattc gacctgatca tcttcgaccg ctacgccaac
     1441 cagagcgtgc tgccctcgac ctatttcgag aacatcgtcc gctacgtgcg cgagggcggc
     1501 gcggtgatgg tggcggccgg gccggaattc gcctcaccgt cgagcctcgc gcggacgcgt
     1561 ctgtcgccga tcattcccgg caacccggac gggcgcatcg tcgagactcc ctacaaggcg
     1621 cgcatcacca accctggtga gcgtcatccc gtgacgcgtg gcctgccggg ttcggaggcg
     1681 agcccgcccg cctggggcga gtggttgcgc gtcatcggcg cgcacgtc
//
LOCUS       DATAIQ010000624         1746 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_153693, whole genome shotgun sequence.
ACCESSION   DATAIQ010000624 DATAIQ010000000
VERSION     DATAIQ010000624.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1746)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1746)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1746
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_153693"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..573
                     /locus_tag="VHN20_10345"
     CDS             <1..573
                     /locus_tag="VHN20_10345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015951934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HEX2726208.1"
                     /translation="QKTAQKSALGGERKTLLFSTRGNIVGNPNGDVTLVEFFDYNCGY
                     CKRALSDLLALLKGDPKLRVVLKDFPVLGPDSVEASRVALAAKQQLKGDKLFEYHNRL
                     METRGRVNGERASAVAKEMGLDMARLQKDLESEEPRAAIQENLMLGDKLGLTGTPAFV
                     IGEEIIAGAVGVEPIRKVVASTRQCGKAVC"
     gene            660..1265
                     /locus_tag="VHN20_10350"
     CDS             660..1265
                     /locus_tag="VHN20_10350"
                     /inference="COORDINATES: protein motif:HMM:NF024993.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726209.1"
                     /translation="MARPSKTALFEAAKRWDVATVKALLAAAPALVMATDPKGRTALH
                     VACAVSPGRQDLGEPHGVNTAEVLLDAGAPLEAAVPMDEAEGDFRATPLWYAVSRGCN
                     LPLVRALLQHGADPSYSLWAVVWRDDADMCRELLAAKPRLNLVADGETPILRGASAAA
                     ENPRSSHRGRRRSVDRGPARARRGRDCVRAAPAEAHNRAPQ"
     gene            complement(1303..>1746)
                     /locus_tag="VHN20_10355"
     CDS             complement(1303..>1746)
                     /locus_tag="VHN20_10355"
                     /inference="COORDINATES: protein motif:HMM:NF015426.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRCF domain-containing protein"
                     /protein_id="HEX2726210.1"
                     /translation="LNVGFAGRIPESYVPEQEVRINLYARVARLASDDELDLLRDEIE
                     DRFGTLPVEAQQLFTLTRLKQACRNLGIARVDAGPEAVAFTFRDKRHAAAPLQQLIKA
                     AKGALAWRGDRLVYERRMRSPAEQARVVTRLVEKLAAALQRDGPT"
BASE COUNT          276 a          593 c          599 g          278 t
ORIGIN      
        1 cagaagaccg cgcagaagag cgctctcggc ggcgagcgta agacgctgct cttctcgacc
       61 cgcggcaaca tcgtcggcaa tccgaacggc gacgtcacgc tggtcgagtt cttcgattac
      121 aattgcggct actgcaagcg cgcgctgagc gaccttctcg cgctcctcaa gggcgatccc
      181 aagctgcgcg tcgtgctcaa ggattttccc gtgctcgggc cggattcggt cgaggcgagc
      241 cgggtagctc tcgccgccaa gcagcagctc aagggcgaca agctgttcga gtatcacaac
      301 cggctgatgg agacgcgcgg ccgcgtcaac ggcgagcgcg cgagcgcggt ggccaaggag
      361 atgggcctcg acatggcgcg cctgcagaag gacctggaaa gtgaggagcc gcgcgcggcg
      421 atccaggaga acctgatgct cggcgacaag cttgggctca cgggcacccc tgctttcgtg
      481 atcggcgagg agatcatcgc cggcgccgtc ggcgtcgagc cgatccgcaa ggtcgtggcc
      541 agcacgcgcc agtgcggcaa ggccgtctgc tgacgcctca ggcctttcgc aaagccgcgc
      601 ctgccggcgc ggcgcctcac tcccgacgga ccgcggtcgc gctatgatcc ttgcctatca
      661 tggcaaggcc atcgaagacc gcgcttttcg aagccgccaa gcggtgggat gtcgcgaccg
      721 tcaaggcact gctcgcggca gcgcccgcgc tcgtcatggc gaccgatccg aaagggcgca
      781 cggcgctgca tgtcgcctgc gccgtttcgc cggggcgcca ggatctcggc gagccacatg
      841 gcgtgaacac ggcggaggtg ctgctcgatg ccggcgcgcc gctggaggct gccgtgccga
      901 tggacgaggc cgagggcgac ttccgtgcca cgccgctgtg gtatgcggtg agtcgcggct
      961 gcaacctgcc gctcgtgcgt gcgctcctgc agcacggcgc cgatccaagc tattcgttgt
     1021 gggccgtcgt atggcgcgac gacgcggaca tgtgccgcga actcctcgcc gcgaagccgc
     1081 gtctcaatct cgtcgccgac ggcgagacgc cgattctacg cggcgcgtct gcagcggccg
     1141 aaaaccctcg atcttctcat cgcggccggc gccgatccgt cgatcgcgga cccgcgcggg
     1201 cgcgacgcgg tcgcgattgc gtgcgcgcgg cgcctgccga agcccataat cgcgcgcctc
     1261 agtgacttgc agctgagttt gcagcacgcc cgatgacgct cgtcatgtgg ggccgtcgcg
     1321 ctggagcgcc gccgccagct tttcgacgag ccgcgtgacc acgcgcgcct gctccgccgg
     1381 gctgcgcatg cggcgttcat agacgaggcg gtcgccgcgc catgcaagcg ctcctttggc
     1441 tgccttgatc agctgctgca gcggcgcagc ggcatgtcgc ttgtcgcgga acgtgaacgc
     1501 gacggcctcc ggcccggcat cgacgcgggc gatgccgaga ttgcggcagg cctgcttgag
     1561 ccgcgtcagg gtgaaaagct gttgcgcctc gacggggagc gtgccgaagc gatcctcaat
     1621 ctcgtcgcgc agcaagtcga gctcgtcatc gctcgccagc ctggcgacgc gcgcgtaaag
     1681 attgatgcgc acctcctgct cgggaacgta actctccggg atgcgccctg cgaagccgac
     1741 attcag
//
LOCUS       DATAIQ010000625         1591 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_310050, whole genome shotgun sequence.
ACCESSION   DATAIQ010000625 DATAIQ010000000
VERSION     DATAIQ010000625.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1591)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1591)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1591
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_310050"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..272)
                     /locus_tag="VHN20_10360"
     CDS             complement(<1..272)
                     /locus_tag="VHN20_10360"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX2726211.1"
                     /translation="MLRALRSGCGLGLVAILSSGGVAMAAERRDQADAASASIYFDRG
                     YAHSLKDDFDRAIADFTEAIRLDPKYISALFSRGVTYYNKGDFDRA"
     gene            complement(480..>1591)
                     /locus_tag="VHN20_10365"
     CDS             complement(480..>1591)
                     /locus_tag="VHN20_10365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012254034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HEX2726212.1"
                     /translation="VIGDANDVSVIFSDGTRLKADIVGKDSKTDLAVLRVKPDKPLKA
                     VNFGDSEKIRPGDWVLAIGNPFGLGGSVTAGIVSARGRNIESGPYDNYIQTDASINKG
                     NSGGPLFNMNGEVIGINTAILSPTGGSVGIGFAVPAATAVSIIDQLRQFGETRRGWLG
                     VRIQNVDDATAEALGLGSARGALIAGIDDKGPAKPAGLEVGDVIVKFDGQEIKSSRDL
                     PRVVAATPVGKAVDVAIMRKGKEQTKSVTLGRLEDNERQASLNQPPVEVPSATRRALG
                     LELSGITDELRRRFSIKDTVKGVVVTRVDPNSVAADKRIQAGEVIVEVGQEPVASPAD
                     VTRRVETLKKDGRKSALLLVANAQGEVRFVAVSIE"
BASE COUNT          259 a          524 c          535 g          273 t
ORIGIN      
        1 atggcgcgat cgaagtcacc cttattgtag tacgtaacgc cgcgactaaa gagagcgctg
       61 atgtatttcg gatcgagcct gatcgcctcg gtgaagtcgg cgatggcgcg atcgaagtcg
      121 tccttgaggc tgtgggcgta accccggtcg aaatagatgc tcgcgctcgc agcatcggcc
      181 tgatcgcgtc gttccgctgc catcgcgaca ccccctgagc tcaggatcgc gacaaggcca
      241 aggccgcaac cacttcgcag agcacggagc atgcccccct cccacactgc gggcacaacc
      301 agggttcagc cctgcgagag tgtacctgcg cacgctgccg tgcaaggcag ggttgtcgtt
      361 gtcgatcgcc ctcatgagaa agtgatcgcg ggcaaacccg aggcggcaaa cgagctcgcg
      421 gtcaaggcaa taaaaaaggg cggccgaagc cgcccttttt gaaaatgcgc catcggcggt
      481 cactcgatcg agacggccac gaagcggacc tcgccctggg cgttggcgac cagaagcagc
      541 gccgacttgc gcccgtcctt cttgagcgtc tcgacgcgac gcgtcacgtc ggccgggctc
      601 gccaccggct cctggccgac ctcgacgatc acctcgcccg cctggatgcg cttgtcggcg
      661 gcaaccgagt tcggatcgac gcgggtcacc acgacgccct tgacggtgtc cttgatgctg
      721 aagcgacggc gcagctcgtc cgtgatgccg gacaattcga ggccgagcgc gcggcgggtg
      781 gcgctcggca cctcgacggg cggctgattg aggctggcct ggcgctcgtt gtcctccagc
      841 cggccgagcg tgacgctctt ggtctgctcc ttgcccttgc gcatgatcgc cacgtcgacc
      901 gccttgccga ccggcgtcgc cgccacgacc cgcggcagat cgcgcgagct tttgatctcc
      961 tggccgtcga acttgacgat cacgtcgccg acctcgaggc cggcgggctt ggccgggccc
     1021 ttgtcgtcga tgccggcgat cagggcgccg cgcgccgagc cgaggccgag ggcttcggcg
     1081 gtggcgtcgt cgacgttctg gatgcgcacg ccgagccacc cgcggcgcgt ctcgccgaac
     1141 tggcgcagct ggtcgatgat cgacacggcg gtggccgcgg gaacggcaaa gccgatgccg
     1201 accgagccgc cggtcggcga caggatggcg gtgttgatgc cgatcacctc gccgttcatg
     1261 ttgaacagcg ggccgccgga attgcccttg ttgatggagg cgtcggtctg aatgtagttg
     1321 tcgtaagggc ccgactcgat gttgcggccg cgcgccgaga cgatgccggc cgtgaccgag
     1381 ccgccgagac cgaacggatt gccgatcgcc agcacccagt cgcccggacg gatcttctcg
     1441 gagtcgccga agttcaccgc cttgagcggc ttgtcgggct tgacgcgcag gaccgcgaga
     1501 tcggtcttgg agtccttgcc gacgatgtcg gccttgaggc gcgtgccgtc ggagaagatc
     1561 acggatacgt cattggcgtc gccgatcacg t
//
LOCUS       DATAIQ010000626         2238 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_60978, whole genome shotgun sequence.
ACCESSION   DATAIQ010000626 DATAIQ010000000
VERSION     DATAIQ010000626.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2238)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2238)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2238
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_60978"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..786)
                     /locus_tag="VHN20_10370"
     CDS             complement(<1..786)
                     /locus_tag="VHN20_10370"
                     /inference="COORDINATES: protein motif:HMM:NF018032.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine ammonia-lyase reactivating factor
                     EutA"
                     /protein_id="HEX2726213.1"
                     /translation="MADPKDPDGTGRHTLADHEFGLDFAHVHDGDADHEHDHFDVDER
                     LEDNPLWIQDHVTLISVGIDIGSSGTQVIFSKINLRRLGEDLSSRYYVVSREQLFQSP
                     VMLTPYQSEERIDDAGLGAIIDEAYAGARMHPDDIDTGVVILTGEALRRENAQGIAAI
                     LAEQGGEFVCATAGHHMESMLAAYGSGAARVSHDEGKRVLNIDIGGGTTKLALVEGGK
                     VIATAAIHIGGRLQVVDENQKIVRLDPAGHHHAERAGFHWHKGD"
     gene            complement(991..2181)
                     /locus_tag="VHN20_10375"
     CDS             complement(991..2181)
                     /locus_tag="VHN20_10375"
                     /inference="COORDINATES: protein motif:HMM:NF014577.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HEX2726214.1"
                     /translation="MRLDFRRQTGTYVGRGQGALTATDTFFGTEPFDRFGIVDLGYIQ
                     FGGLTAGRVQSFFDFWANDGIYTTLNGVSDTKTQALAYTATFGSGFSATLAIEDAQER
                     RTLAAVRPLNFGAPFVPVVATALDPVEVVPGGTRAPDVVANLRVDQAWGAAQLSAALH
                     QVRSINPVTVDPVTGLPIVGIAPVPDAAIGTTFPDNELGYAIQGGVQVKMPFIAAGDS
                     LWVQAAWAHGALGYTHAAPFTAARAGVLRLNQTEATMNPFTGDIELTDSWSISANFLH
                     YWLPNLRQNIFAAYSEIDYDATASRAFVAPGPGGFPVVVNSGFTDTKIFEIGTNLIWS
                     PVRNLDIGVEAVYRKVETEGLVRREFGGVGFGANRPVTAAVPFTAVSDQDALEARLRI
                     QREF"
BASE COUNT          385 a          708 c          769 g          376 t
ORIGIN      
        1 gtcgcccttg tgccagtgga agccggcccg ctcggcgtga tggtgccccg ccgggtcgag
       61 ccgcacgatc ttctggttct catcgacgac ctgcagacgg ccaccgatgt gaatcgccgc
      121 ggtcgcgatc accttgccgc cctcgacgag cgccagcttg gtcgtgccgc cgccgatgtc
      181 gatgttgagg acgcgcttgc cttcgtcgtg ggagacgcgc gcggcgcccg agccgtaggc
      241 ggcgagcatc gattccatat ggtgcccggc ggtggcgcag acgaattcgc cgccttgctc
      301 ggccaggatc gcggcgatgc cttgcgcgtt ttcgcggcgc aacgcctcgc ccgtcaggat
      361 cacgacgccg gtgtcgatgt catcggggtg catgcgcgcg cccgcatagg cctcgtcgat
      421 gatggctccg aggccggcat cgtcgatgcg ctcctcgctt tggtatggcg tcagcatgac
      481 cggggactgg aacagctgct cgcgcgagac gacgtagtag cggctcgaga gatcctcgcc
      541 gagccggcgc agattgatct tggaaaagat gacctgtgtg ccggaggagc cgatgtcgat
      601 gccgacgctg atcagcgtca catgatcctg gatccagagg gggttgtctt cgagacgctc
      661 gtcgacgtcg aaatggtcgt gctcgtggtc ggcgtcgccg tcatgaacgt gagcgaagtc
      721 gaggccaaat tcatgatccg ccaacgtatg gcggcccgtt ccgtccgggt ccttggggtc
      781 agccatcagc tttcctggaa gcgtgcgcct cgcgcaccct gatcaatcgt cagggggctt
      841 ttgtcaggtc tggcgcccgc tcgtcaacac ctcggccgta ttcccgtaag cttgcctaat
      901 gaggggtcat cccccgctcg cgtaaaaatg gtgtccaaaa tgaaaagccc cggcacgagg
      961 ccggggcttt ccgttcgaaa ggctgcgcta tcagaactcg cgctggatgc ggaggcgagc
     1021 ttccagagcg tcctggtcgc tgaccgcggt gaagggcacc gctgccgtga ccggacggtt
     1081 ggcgccgaag ccgacaccac cgaactcgcg acggacgagg ccttcggtct cgaccttgcg
     1141 gtagaccgct tccacgccga tgtcgagatt gcggaccggc gaccagatca ggttggtgcc
     1201 gatttcgaag atcttcgtgt cggtgaagcc ggagttgacg accacaggga agccaccagg
     1261 tccgggcgcc acgaaggcgc ggctggcagt cgcatcatag tcgatttccg aatacgcggc
     1321 gaagatgttc tggcgcaggt tcggcagcca gtagtgcagg aagttagccg agatcgacca
     1381 gctgtccgtg agctcgatgt cgcccgtgaa ggggttcatc gtggcttccg tctggttcag
     1441 gcggagcacg ccggcgcgag ccgccgtgaa cggagcagcg tgggtgtagc ccagcgcgcc
     1501 gtgcgcccaa gccgcctgga cccacaagga gtcgccggcc gcaatgaacg gcatcttcac
     1561 ctggacaccg ccctggatgg cgtagcccag ctcgttgtcc gggaacgtgg tgccgatagc
     1621 ggcatccgga accggcgcga taccgacgat cggcagaccg gtgaccggat caaccgtgac
     1681 cgggttgatc gagcgcacct ggtgcaacgc agccgacagc tgagcggcgc cccacgcctg
     1741 gtcgacgcgg agattagcga cgacgtcagg cgcgcgggtg ccgcccggaa ccacttcgac
     1801 cggatcgagc gcggtcgcga cgaccggaac gaacggcgca ccgaagttca gcggacgcac
     1861 cgccgccagg gtccggcgct cctgcgcgtc ttcgatggcg agggtcgccg agaagccgct
     1921 gccgaaggtc gccgtgtagg ccagcgcctg ggtcttggta tcggacacac cgttcagcgt
     1981 cgtgtagatg ccgtcgttgg cccagaagtc gaagaacgac tggacacgac cggccgtcag
     2041 cccgccgaac tggatgtagc cgagatcgac gatgccgaac cggtcgaacg gctcggtgcc
     2101 gaagaacgtg tccgtcgccg tgagcgcgcc ctggccgcga ccgacatacg tgccggtctg
     2161 acggcggaag tcgaggcgca tctaaccgcg cagcaggccc cacgcggtgg ccgtgcgcag
     2221 atcgagggtg agacgggc
//
LOCUS       DATAIQ010000627         6511 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_245951, whole genome shotgun sequence.
ACCESSION   DATAIQ010000627 DATAIQ010000000
VERSION     DATAIQ010000627.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 6511)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6511)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6511
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_245951"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..187)
                     /locus_tag="VHN20_10380"
     CDS             complement(<1..187)
                     /locus_tag="VHN20_10380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HEX2726215.1"
                     /translation="MAKEKFARTKPHCNIGTIGHVDHGKTSLTAAITKVLAEQGKAQF
                     TAYDQIDKAPEEKARGIT"
     gene            complement(231..2306)
                     /gene="fusA"
                     /locus_tag="VHN20_10385"
     CDS             complement(231..2306)
                     /gene="fusA"
                     /locus_tag="VHN20_10385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004447767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HEX2726216.1"
                     /translation="MPRTHAIEDYRNFGIMAHIDAGKTTTTERILYYTGKSHKIGEVH
                     EGAATMDWMEQEQERGITITSAATTCFWRDKRLNIIDTPGHVDFTIEVERSLRVLDGA
                     VCVLDGNQGVEPQTETVWRQADKYDVPRVVFVNKMDKIGADFFKCVDDIVKRVGGKPV
                     CLQLPIGAESNFQGVIDLIKMKGLVWSGEALGAKFDEVDIPADLLDQAKEYRGKLVEA
                     AVELDDDAMVAYLEGQEPDEATLRRLVRLAVQKRAFHPVLCGSSFKNKGVQPLLDAVV
                     DYLPSPADRGAIPGIDPNTEQPIERRPLDTDPFSMLAFKIMDDPFVGTITFCRVYSGK
                     VESGSGLINSTREKKERVGRMLLMHANNREDIKEAFAGDIVALAGLKDVRTGDTLCDP
                     QKPVILEKMEFPEPVIEIAVEPKSKADQEKLGVALAKLAAEDPSFRVSTDPESGQTIL
                     KGMGELHLDIKIDILRRTYKVDANIGAPQVAYRERISKPVTVDYTHKKQTGGSGQFAR
                     VKLVVEPNEPAAGYEFESKIVGGSVPKEYIPGVEKGLESVLGSGVLAGFPVVDLKVQL
                     IDGAYHEVDSSALAFEIASRSALREALQKGGSVLLEPIMKVEVVTPEDYTGSVIGDLN
                     SRRGQIQGQDMRGNAVVINAMVPLANMFGYVNTLRSMSQGRATFTMQFDHYEQVPSNV
                     AAEVQAKYA"
     gene            complement(2333..2803)
                     /gene="rpsG"
                     /locus_tag="VHN20_10390"
     CDS             complement(2333..2803)
                     /gene="rpsG"
                     /locus_tag="VHN20_10390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012589626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HEX2726217.1"
                     /translation="MSRRHRAEKREIIPDPKYGDIVVTKFMNSVMYEGKKSVAERIVY
                     GAFDVIEQRAKANPLEVFKQALDNVAPAIEVRSRRVGGATYQVPVEVRPDRRQALAIR
                     WLIQAARGRNDKTMVDRLSAELMDAANNRGNAVKKREDTHRMAEANRAFSHYRW"
     gene            complement(2940..3311)
                     /gene="rpsL"
                     /locus_tag="VHN20_10395"
     CDS             complement(2940..3311)
                     /gene="rpsL"
                     /locus_tag="VHN20_10395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020185797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HEX2726218.1"
                     /translation="MPTISQLIRKPRMAQKSRNKVPALEACPQKRGVCTRVYTTTPKK
                     PNSALRKVAKVRLTNGHEVIGYIPGEGHNLQEHSVGMIRGGRVKDLPGVRYHILRGVL
                     DTQGVKNRKQRRSLYGAKRPK"
     gene            3811..5214
                     /locus_tag="VHN20_10400"
     CDS             3811..5214
                     /locus_tag="VHN20_10400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008839085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008430 - selenium binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="selenium-binding protein SBP56-related protein"
                     /protein_id="HEX2726219.1"
                     /translation="MATWLPDQSFYMSPRAAAKAPPETLAYVAMFDPSGTEPDGIAVV
                     DVGPRSASYGEIVATVAMPHAGDEFHHFGWNACSSCLCPNAPHPHVERRYLVVPGLRS
                     SRIYIIDTKPDPLAPKIVKVIEPEEIARKTGYSRPHTVHCGPDGIYVTALGNGHGKGP
                     GGIFLIDQESFEPIGPWESDRGPQHLAYDAWWHLGHDVMVTSEWGTPDMIEDGLVPEL
                     LLGAKYGHCLHFWDLGTRRHVQTVDLGEKHQLALELRPAHDPTKAYGFTNTVVSLEDL
                     SSSIWVWHKAADGQGGWAATKVIDIPAEPADPDILPPLLKGFGAVPPLVTDIDLSMDD
                     RFLYVSCWGTGDLRQYDVSDPLNPKLTGKVRIGGIVSRETHPGARNGALNGGPQMVEI
                     SRDGRRVYFTNSLYGAIDPQFYPEGIDGWMVKLDAHPDGGISFDPDFFIEWPRSHRPH
                     QVRLQGGDCSSDSYCYP"
     gene            5255..5896
                     /locus_tag="VHN20_10405"
     CDS             5255..5896
                     /locus_tag="VHN20_10405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016554320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726220.1"
                     /translation="MSGIAMPSWAWLTLAGLGAFHGLNPAMGWLFAVALGLYRGEQRT
                     VLLSLVPIALGHAAAVAATLAVFVAFGLTMDAAVLSRVAAAVLIGWAVWHALRGHRRP
                     LRVGMRTGLAGLAAWSFMMASAHGAGLMLIPVLAPLCASPALPDPAHGADPLALALAA
                     LAVHTAAMLAAIAAVSVAVYRWVDVDFLRRGWLNVDLLWTSALAVCGLVLLIG"
     gene            complement(6126..>6511)
                     /gene="rpsD"
                     /locus_tag="VHN20_10410"
     CDS             complement(6126..>6511)
                     /gene="rpsD"
                     /locus_tag="VHN20_10410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011314595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HEX2726221.1"
                     /translation="RMKGDSGENLIGLLERRLDAVVYRAKFVPTPFAARQFVNHGHVK
                     VNGRRVNIPSFLVKPGDVVELKDASKQLEIVVVAAQLAERDVPDYIDVDHTKMTARLT
                     RVPALNEVPYAVQMEPNLVIEFYSR"
BASE COUNT          996 a         2195 c         2107 g         1213 t
ORIGIN      
        1 tcgtgatgcc gcgcgccttc tcctcaggcg ccttgtcaat ctgatcatag gccgtgaact
       61 gagccttgcc ctgctccgcc aaaaccttgg tgatcgccgc agtcagcgac gtcttgccat
      121 ggtcgacgtg accaatcgtt ccgatgttgc agtgcggctt cgtccgcgca aatttttcct
      181 tggccattgc agcaccctgc tttcttgaac ctgaagttgg agtgacgtgg tcaggcgtat
      241 ttcgcctgga cctcggcggc gacgttagac ggcacctgct cgtagtggtc gaactgcatc
      301 gtgaatgtgg cgcggccctg cgacatggac cgcagcgtgt tgacgtagcc gaacatgttg
      361 gcgagcggca ccatcgcgtt gatgacgacc gcgttgccgc gcatgtcctg gccctggatc
      421 tggccgcgcc gcgagttgag atcgccgatc acggagccgg tatagtcctc cggcgtcacg
      481 acctcgacct tcatgatcgg ctcaagcaga accgacccgc ccttctgcag cgcctcgcgc
      541 aaggcagagc gggacgcgat ctcgaaggcc agcgccgacg agtcgacctc gtggtaagcg
      601 ccgtcgatca gctgcacctt gaggtccacc acggggaagc cggcgagcac gccggaaccc
      661 agcacgctct ccaggccctt ctcgacgccc gggatgtatt ccttcggcac cgacccgccg
      721 acgatcttcg attcgaactc gtagccagcc gccggctcgt tgggctcgac caccagcttg
      781 acgcgggcga actggcccga gccgccggtc tgcttcttgt gcgtgtagtc gaccgtgacc
      841 ggcttgctga tcctctcgcg ataggcgacc tgcggggcgc cgatattggc gtccaccttg
      901 taggtgcgcc tcaggatgtc gatcttgatg tcgaggtgca gctcgcccat gcccttgagg
      961 atggtctggc ccgactccgg atcggtcgag acgcggaacg aggggtcctc ggccgcgagc
     1021 ttcgccagcg cgacgccgag cttctcctgg tcggccttcg acttcggctc gacggcgatc
     1081 tcgatgaccg gctccgggaa ttccatcttc tcgagaatga cgggcttctg cggatcgcac
     1141 agcgtgtcgc cggtgcggac gtccttgagg ccggccagcg cgacgatgtc gccggcgaag
     1201 gcttccttga tgtcctcgcg gttgttggcg tgcatcagca gcatgcggcc cacgcgctct
     1261 ttcttctcac gcgtcgagtt gatcaggccc gagccggatt cgaccttgcc cgaatagacg
     1321 cggcagaacg tgatcgtgcc gacgaacggg tcgtccatga tcttgaaggc gagcatggag
     1381 aacggatccg tatcgagcgg acggcgctcg atcggctgtt cggtgttcgg atcgatcccg
     1441 gggatggcgc cgcgatcggc cggggacggc aggtaatcga cgacggcgtc gagcagcggc
     1501 tgcacgccct tgttcttgaa cgacgagccg cacaggaccg ggtggaaggc gcgcttctgc
     1561 accgcgagac ggacgagccg gcgcagggtg gcctcgtcgg gctcctggcc ctcgagatag
     1621 gccaccatgg cgtcgtcgtc gagctcgaca gcggcctcga cgagcttgcc gcggtattcc
     1681 ttggcctggt cgagcaggtc ggccgggata tcgacctcgt caaacttggc gccgagcgcc
     1741 tcgcccgacc acaccaagcc cttcatcttg atcaggtcga tgacgccctg gaagttgctc
     1801 tcggcgccga tcggcagctg caggcagacc ggcttgccgc cgacgcgctt gacgatgtca
     1861 tcgacgcatt tgaagaagtc ggcgccgatc ttgtccatct tgttgacgaa cacgacgcgc
     1921 ggcacgtcgt atttgtcggc ctggcgccat acggtctcgg tctgcggctc gacgccctgg
     1981 ttgccgtcga gcacgcagac ggcgccgtcg agcacgcgca gcgaacgctc gacctcgatg
     2041 gtgaagtcga cgtggccggg ggtgtcgatg atgttcagcc gcttgtcgcg ccagaagcag
     2101 gtggtcgcag cggacgtgat cgtgatgcca cgctcctgct cctgctccat ccagtccatc
     2161 gtggcggcgc cctcatggac ttcgccgatc ttgtgcgact tgccggtgta gtagaggatc
     2221 cgctcggtcg tcgtggtctt cccggcatcg atgtgcgcca tgatgccgaa attgcggtag
     2281 tcctcgattg cgtgcgtgcg tggcatcgca aaaaactcct gatagcccgc cgttaccagc
     2341 ggtaatgcga gaatgcgcgg ttggcttcgg ccatccggtg cgtgtcctcg cgcttcttga
     2401 ccgcgttgcc gcggttgttg gcggcgtcca tcagctccgc ggagagccgg tccaccatgg
     2461 tcttgtcgtt gcggccgcgc gcggcctgga tcagccagcg gatggccagg gcctggcgcc
     2521 ggtccggacg aacctcgacc ggcacctggt aggtcgcgcc gccgacgcgc cgcgagcgca
     2581 cctcgatggc cggagcgacg ttgtccagcg cctgcttgaa cacctcgagg gggttcgcct
     2641 tggcgcgctg ctcgatcacg tcgaaggcgc cgtagacgat gcgctcggcg accgacttct
     2701 tgccttcgta catcaccgag ttcatgaact tcgtgacgac gatatccccg tatttgggat
     2761 cggggatgat ctcgcgtttc tcggccctgt gacggcggga catgtcgttt tcctcgtctc
     2821 ttcgtcccgg gcaagcgtag cgagacccgg gatcgtgcgc cgaacaggcg cctctttcgt
     2881 cctacgatcc cggaccgtcg ccttcggctc cgtccgggat gaccttcgct ccggtcagat
     2941 cacttcggcc gcttggcgcc gtagagcgag cggcgctgct tgcgattctt gacgccctgc
     3001 gtgtcgagca cgccgcgcag gatgtggtag cgcacgccgg gcaggtcctt gacgcgcccg
     3061 ccgcggatca tcccgaccga gtgctcctgg aggttgtggc cctcgcccgg gatgtagccg
     3121 atgacctcgt ggccattggt gaggcgaacc ttggcaacct tgcgcagcgc cgagttcggc
     3181 ttcttcggcg tcgtcgtata gacgcgggtg caaaccccgc gcttttgcgg acaggcctcg
     3241 agcgccggca ccttgttgcg gctcttctgg gccatccgcg gcttgcggat cagctggctg
     3301 atcgtcggca ttccatgccc tctttcacaa ggccgcgctg gcggccgctt ctacccgtcg
     3361 gttgaacact gcgtcgcgcg ggctcgccac cggcaaactc cagcgcaaaa cgaaaccgcg
     3421 ccacaggccc ggaaagggcc tttggcgccg cacatgcaga ggatcacgat tggctcgcga
     3481 tcgtgccaca gagctgacca gtgtcggtcg tcgttgagtt cggcagtgtt taggcggcgt
     3541 tgatcaggct gtggcagctc cgatcgccag tcgcctacga ccagccggaa gtccgcgcct
     3601 tctaaagccc gagtcgcccc tcgtcaactc gaaatcggcg cagaagcgtt ccgaaatcct
     3661 atgtagtgac gcccgcggac gggaaaaggg ctgcagccgt cagcatgatc attttttgcg
     3721 tgccgaatcg gccgcacgga cctccccctt ctcgtcacga gcccgctttc gcggtagctt
     3781 aaccatggct gggcggacag ggaggacacc atggcaacgt ggctgccgga ccagagcttc
     3841 tatatgtccc ctcgcgccgc ggcgaaggcg ccccccgaga cgctcgccta tgtggcgatg
     3901 ttcgacccga gcgggaccga gccggacggc atcgcggtcg tcgacgtcgg cccgcggtcg
     3961 gcctcctacg gcgagatcgt cgcaaccgtg gccatgcccc atgccggcga cgagttccac
     4021 catttcgggt ggaacgcatg ctcgtcctgc ctgtgcccga acgcgccgca tccgcacgtg
     4081 gagcggcgct atctcgtggt gccgggcctg cgctcgtcgc gcatttatat catagacacc
     4141 aagcccgacc cgctagcgcc gaaaattgtc aaggtgatcg agcccgagga gatcgcccgc
     4201 aagaccggct acagccgccc gcataccgtg cattgcggac cggacggcat ctatgtgacc
     4261 gccctcggca acggccacgg caaggggccg ggcggcatct tcctgatcga ccaggagagc
     4321 ttcgagccga tcggcccctg ggagagcgac cgcggcccgc agcacctggc ctatgacgcc
     4381 tggtggcacc ttggccatga cgtgatggtc accagcgaat ggggcacgcc cgacatgatc
     4441 gaggacgggc tcgtccccga gttgctgctc ggggccaaat acgggcactg cctgcatttc
     4501 tgggacctgg gcacgcggcg ccatgtgcaa acggtggatc tcggggaaaa gcaccagctc
     4561 gccctcgagc tgcgccccgc ccacgatccg accaaggcct acggcttcac caacacggtg
     4621 gtcagcctcg aggacctgtc gtcgtcgatc tgggtctggc acaaggcggc cgacggccag
     4681 ggcggctggg cggccaccaa ggtgatcgac atcccggccg agcccgccga tccggacatt
     4741 ctgccgcccc tcctcaaggg atttggggcc gtcccgcccc tcgtcaccga catcgacctg
     4801 tcgatggacg accgcttcct ttacgtgtcg tgctggggca ccggcgacct ccggcaatac
     4861 gacgtctccg accccctcaa cccgaagctc accggcaagg tgcgcatcgg cggcatcgtt
     4921 tcccgtgaaa cccatcccgg cgcccgcaac ggcgccctca acggcggccc gcagatggtg
     4981 gagatcagcc gcgacggcag gcgggtctat ttcaccaact cgctctacgg cgccatcgac
     5041 ccgcaattct acccggaggg catcgatggc tggatggtca agctcgacgc ccacccggac
     5101 ggcggcatct ccttcgatcc cgacttcttc atcgaatggc cgcggagcca ccggccgcac
     5161 caggtgaggc tgcagggcgg cgactgctcg tccgattcct actgctaccc ctgacgcgcg
     5221 ggatcgggcg cggcccagca cgcggatcga cgccatgagc gggatcgcca tgccgtcctg
     5281 ggcttggctg acgctggccg ggctcggcgc cttccacggc ctcaacccgg ctatgggctg
     5341 gctgttcgcg gtcgcgctcg ggctctatcg cggcgagcag cggaccgtgc tgctgtcgct
     5401 cgttccgatc gccctcggcc acgcggccgc cgtggcggcg acgctggccg tcttcgtggc
     5461 cttcggcctc accatggacg cggccgtcct gagccgggtg gcggccgcgg tcctgatcgg
     5521 ctgggccgtc tggcacgccc tgcgcggcca tcgccggccg ctccgtgtcg gcatgcggac
     5581 cggcctcgcc ggcctcgccg cctggtcgtt catgatggcg agcgcgcacg gcgccggcct
     5641 gatgctgatc ccggtcctgg ctccgctctg cgcgtcccct gccctgcccg acccggccca
     5701 cggcgccgac ccgttggcgc tggccctggc ggcgcttgcc gtccacacgg ccgccatgct
     5761 ggccgccatc gcggccgtgt ctgtggccgt ctaccggtgg gtggacgtcg acttcctccg
     5821 gcgcggctgg ctcaacgtcg atctgctctg gacgtccgcc ctcgcggttt gcggcctcgt
     5881 cctgctgatc ggttgagccg cgctccatcg cctgtcgaga tggctgccag agcatgattc
     5941 ggcgaagtgg ataccacttc gccgaaaaag gtcatgcgac tcaatgagat ttagaacgga
     6001 atcgattcaa tctgacgtga tcccgctcta agattcagcc tcgcggcatt gccgaacgtc
     6061 gcatggtgct gaaaacaaaa aggccgcccg gaggcggcct tggtatcggt tcgcgcgaga
     6121 acgtatcagc gcgaatagaa ctcgatgacg aggttcggtt ccatctgtac cgcatagggt
     6181 acctcgttga gcgccggaac ccgggtcagg cgggccgtca tcttggtgtg atcgacgtcg
     6241 atgtagtcgg gcacgtcgcg ctcggcgagc tgcgccgcga cgaccacgat ctcgagctgc
     6301 ttcgaggcgt cctttagctc gacgacgtcg cccggcttta ccaggaagct cgggatgttg
     6361 acgcggcggc cgttcacctt gacgtggccg tggttcacga actgacgcgc ggcgaacggg
     6421 gtcggcacga acttcgcccg gtagaccacg gcgtcgagcc ggcgctcgag caggccgatg
     6481 aggttctcgc ccgagtcgcc cttcatgcgg a
//
LOCUS       DATAIQ010000628         5748 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_199647, whole genome shotgun sequence.
ACCESSION   DATAIQ010000628 DATAIQ010000000
VERSION     DATAIQ010000628.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 5748)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5748)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5748
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_199647"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..445)
                     /locus_tag="VHN20_10415"
     CDS             complement(<1..445)
                     /locus_tag="VHN20_10415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018043683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEX2726222.1"
                     /translation="MDQQFSAARPVPRVSIVVPVKNEAPNIRPLIEEIERACAALAPF
                     ETVYVDDGSTDATQAELAIVRATRPWLRVMRHAESCGQSAALRTGVTAARAPIIATID
                     GDGQNDPAYIPALVRELESGGGRCGLAAGQRVGRKGRGKKWQSRIA"
     gene            complement(477..2207)
                     /locus_tag="VHN20_10420"
     CDS             complement(477..2207)
                     /locus_tag="VHN20_10420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019904035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HEX2726223.1"
                     /translation="MTTFAAAGRAGLASADAPTWSDRLLALVERSHARAAAVLLALSL
                     VCFLPGFVSLQPMDRDEPRFAQASKQMLESGDFVDIRFQDEARHKKPVGIYWLQSAVV
                     AAAETAGVAEARTTVALYRIPSLIGAMAAVLLTYWAALAFVSRRGAFLAAAMMAASII
                     LMVEARLAKTDAMLLACCIATMGALARAYVARGTAQLPLATSLAFWFAFAIGVLIKGP
                     LVIMFTGLCAFVLSIRYRSARWLMALRPALGVTLVLALVAPWFIAISIKSGGAFYAEA
                     VGHDMLGKVGTAQTYHWAPPGFYLLAFFATFWPAAALATIAIPFAWANRHEDAVAFAL
                     AWIIPAWLVFEAVPTKLPHYVMPVYPAIAILTVMAMARGFVGPHRPGARWVALLIPFI
                     PVGLALLLIVAAWSLDGALPYVALPVLLAACVLALLAWRIFVKGEVARASVAAIAASA
                     VLSIGVFGLTAPVLRSLKLSPRLAEVVRTLDCPDPAVGTLGYREPSLVFLVGTDLQML
                     PDGRGAAEFLKGGNCRLVFVERRFEEAFRAEAARLGTQPALSTRISGFNINGGRRLDI
                     GAYVIRPNAG"
     gene            complement(2402..2662)
                     /locus_tag="VHN20_10425"
     CDS             complement(2402..2662)
                     /locus_tag="VHN20_10425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726224.1"
                     /translation="MEAVYGAGALPVAAQDRATKAVAARLHLFGLVSIEAVEADGSMR
                     RLRPSESMHAAVERPWRISKASAGARRPFGSTARVSVASPTL"
     gene            complement(2940..3770)
                     /locus_tag="VHN20_10430"
     CDS             complement(2940..3770)
                     /locus_tag="VHN20_10430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017484937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEX2726225.1"
                     /translation="MKTILVPTAAHDLINSVLETALLTARRFGSYVEGFALRPLITEY
                     VPVDMVGGLTWARDDISDEQAVAAARQTFERFMADRGVARFAAGAVGYGWLEDATAGD
                     AFVSSHARVFDLTVLGRPTAGQAEPSMATLEAVLFESGRPILIAPPTAPATLGEVIVI
                     AWNGSTETARATGFAMPFLKQARRVLVMTVEGGPLHGPSGEQMSRSLRLNDVAAEAVT
                     VSAGKRSIGEAFLKSAESAGADLLIKGAYTQSRLRQMIFGGTTSHILAEATMPVLMAH
                     "
     gene            complement(3890..4387)
                     /locus_tag="VHN20_10435"
     CDS             complement(3890..4387)
                     /locus_tag="VHN20_10435"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX2726226.1"
                     /translation="MNPASTSQPRILVVEGEPIASGILSDLLRMAGYEAVCAGTGEQA
                     LLTLMRERGRIDAVFTEVDLPGLVDGWMVAEEFRSARPAGPIVFAARPGSEAQIGAGT
                     AVVASPVLPPKVVEALATLDGKVQEVARSRCALREIVEARSEEAIGSAGPSVVEGPQR
                     VRATG"
     gene            complement(4497..4766)
                     /locus_tag="VHN20_10440"
     CDS             complement(4497..4766)
                     /locus_tag="VHN20_10440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726227.1"
                     /translation="MNGIVLRWAVAPIAAVLLVPILAAGPSQAAAAKSARAAYAQAPA
                     SNGAGTAGADPGGTASTHGDAGCAKARKKLWTDSGWIVRRVTLCR"
     gene            5104..>5748
                     /locus_tag="VHN20_10445"
     CDS             5104..>5748
                     /locus_tag="VHN20_10445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012333032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HEX2726228.1"
                     /translation="MWPAAGRRTPVMNAPAPKISFVSLGCPKALVDSERIITQLRAEG
                     YELTKKHAGADLVIVNTCGFLDSAKAESLGAIGDALSENGKVIVTGCMGAEPGEIRDR
                     FPNVLAVTGPQQYESVVAAVHEAAPPAHDPFFDLVPPQGVKLTPRHYAYLKISEGCNN
                     RCSFCIIPKLRGDLVSRPAGDVLREAERLVKAGVKEILVISQDTSAYGIDLKYAA"
BASE COUNT         1013 a         1960 c         1922 g          853 t
ORIGIN      
        1 tggcgatgcg cgattgccat ttcttaccgc gccccttgcg gccgacgcgc tggcccgcgg
       61 caaggccgca tcgcccgccc ccgctttcca gctcgcgcac cagggctgga atgtaggcgg
      121 gatcattctg gccgtcgccg tcgatcgttg cgatgatcgg cgcccgagcc gccgtcacgc
      181 ctgtgcgcag ggccgcgctc tggccgcagc tctcggcatg gcgcatgacg cgcagccatg
      241 gccgcgtcgc gcgcacgatg gccagctcgg cttgcgtggc gtcggtcgag ccgtcgtcca
      301 cgtagaccgt ctcgaacggc gcgagcgcgg cgcaggcgcg ctcgatctcc tcgatcagcg
      361 gccgaatgtt gggggcttcg ttcttcaccg gcacgacgat gctgacgcgc ggaaccggcc
      421 gtgccgcaga aaactgttgg tccatgacgt gggtccgtga gtcgggcgac ccgggctcat
      481 ccagcattgg gtctgatcac ataagcgccg atgtcgaggc ggcgcccgcc attgatattg
      541 aaaccgctga tgcgggtcga gagcgccggc tgcgttccga gccgcgcagc ttcggcgcgg
      601 aacgcctctt cgaagcgccg ctcgacgaac accagccggc agttgccgcc cttgaggaat
      661 tccgcggcgc cccgaccgtc cggcagcatc tgcagatcgg tgccgacgag aaagacgagg
      721 ctcggctcgc gatagcccag tgtgccgacc gccggatccg ggcaatccag cgtgcgaaca
      781 acctcggcga gccgcggcga cagcttgagc gagcgcagca ccggcgcggt aaggccgaac
      841 acgccgatcg acagcacggc cgacgccgcg atggcagcga cggacgcacg cgccacctca
      901 cctttcacga aaatgcgcca cgccagcagg gcaagcacac aggcggcgag cagcaccggc
      961 aaggcgacat aaggcaaggc gccgtcgagg gaccacgccg ccacgatcag cagaagcgcc
     1021 aaaccgaccg ggatgaaggg gatcagcaga gcgacccagc gcgcgccggg acgatgcggg
     1081 ccgacgaatc cgcgggccat cgccatgacg gtgagtatgg cgatcgccgg ataaaccggc
     1141 atcacgtaat gcggcagctt ggtggggacc gcctcgaaga ccagccatgc cgggatgatc
     1201 caggctagcg cgaaggcgac cgcgtcctcg tgtcggttcg cccaggcaaa cggaatcgcg
     1261 atcgtggcga gggccgccgc cggccagaac gtggcgaaaa acgcgagcag gtagaagccc
     1321 ggcggcgccc agtggtaggt ctgcgccgtg ccgaccttgc cgagcatgtc gtgcccgacc
     1381 gcctcggcgt aaaacgcccc gccgctcttg atcgagatgg cgatgaacca cggagcgacc
     1441 agcgcgagca ccagcgtcac gccgagcgcg ggacgcagcg ccatgagcca gcgcgccgag
     1501 cgataccgaa tcgagagcac gaaggcgcac agcccggtga acatgatcac gagcgggccc
     1561 ttgatgagga cgccgattgc aaaggcgaac cagaacgcaa ggctcgtggc gagcggcagt
     1621 tgcgcggtgc cgcgcgcgac ataggcgcgg gcgagcgcgc ccatggtggc gatgcagcag
     1681 gcgaggagca tcgcatcggt cttggcgagc cgcgcctcga ccatcagaat gatcgaggcg
     1741 gccatcatcg ccgccgcgag gaaggctccc cgccgcgaca cgaaagcgag cgccgcccag
     1801 tacgtcagca gcaccgccgc catagcgccg atcagcgagg gaatgcggta gagtgcgacc
     1861 gtggtgcgcg cctcggcgac gccggccgtt tcggcagccg cgacgacggc gctttgcagc
     1921 caatagatgc cgaccggctt cttgtgccgc gcctcgtcct gaaagcggat gtcgacgaag
     1981 tccccgctct cgagcatctg cttcgaagcc tgcgcgaatc gcggctcgtc gcgatccatc
     2041 ggctgcagcg acacgaaacc gggcaggaag caaaccagcg agagggcgag cagcaccgca
     2101 gcggcccgag cgtggctgcg ctcgacgagc gccagcaatc gatccgacca cgtcggagcg
     2161 tcggcgcttg ccaagccggc ccgtccggcg gctgcaaagg tggtcatcag cggctccgac
     2221 gagcgagggc ccctgccccg ccccgttcag cagccgcaaa tcattgtggc aggctgccga
     2281 gcggccgctc tgtcgtccat cttaccgccg aagtcaaacc tggagcacaa tcccgtaaag
     2341 cggatcggcg tcaccgcaac ggatcttgct caagacgaat cgggctaatc gcccgatgcg
     2401 ttcagagggt cgggctggca acgcttacgc gcgcggtcga gccgaacgga cgtctcgcgc
     2461 cggcagacgc cttggagatg cgccatggac gttccacggc cgcgtgcatc gactcggacg
     2521 gacgcaggcg acgcatgctg ccatcggctt ccactgcctc gatgctgacg agcccgaaca
     2581 ggtgcagacg cgccgccacg gccttggtcg cgcgatcctg ggccgccacc ggcagagcac
     2641 cggcgccata cacggcctcc atcaggttct tttgatcacc gtatgaggaa tgatttgcct
     2701 gaccgcgtcg gaaacgcacg acattggtcg ttgtctcttg ttcttggttc attgcgacgc
     2761 cccctaacgc aactgcaact caactgaagg gagcctcgcc tgaagccatt aaaatagggc
     2821 taaccctcac gcgctttcag cggcgccgtt gttgatggcg ggaacgcccc gcttcatagg
     2881 gcaatcgtta tttgcgagtg ccgcaagttt ccgctgcgga tgttgccgac ggccagtgtc
     2941 taatgggcca tgagcaccgg catggtcgct tcggccagga tgtggctcgt ggtcccgccg
     3001 aagatcatct ggcgcagccg gctttgcgtg taggcgccct tgatcaggag atcggcgccg
     3061 gccgattcgg ccgacttgag gaaggcttcg ccgatgctgc gcttgccggc cgaaacggtg
     3121 accgcctcgg cggcgacgtc gttgaggcgc agggagcgcg acatctgctc gccggacggg
     3181 ccgtgcagcg gcccgccttc gacggtcatc acgagcaccc gccttgcctg cttcaggaag
     3241 ggcatggcga agccggtggc gcgtgccgtc tcggtgctgc cgttccaggc gatcacgatc
     3301 acctcgccca gcgtcgctgg cgcggtcggc ggagcgatca gaatcggtcg cccgctctcg
     3361 aacaggacgg cttcgagggt ggccatgctc ggctcggcct ggccggccgt gggacggccg
     3421 aggaccgtga gatcgaagac gcgggcatga ctgctgacga aggcgtcacc ggccgtggcg
     3481 tcctcgagcc agccgtatcc gaccgcgccc gccgcgaagc gggcgacacc gcggtcggcc
     3541 atgaagcgct cgaaggtctg gcgcgcggcc gcgaccgcct gctcgtcgct gatgtcgtcg
     3601 cgcgcccagg tcaggccgcc gaccatatcg acagggacgt attcggtgat cagcgggcgc
     3661 aaggcaaagc cttcgacgta gctgccgaag cggcgcgccg tcagcagggc cgtttccaat
     3721 accgagttga tgagatcgtg agcagcagtc ggaacgagga tcgttttcat aggtcacgcg
     3781 ccccgcgccc gttctcgggc acagccggga gaatgtctcg aaaacgaggt ggccgggcaa
     3841 gcgaaatgtc gaaacccggc aaacagcttg cgccgatgtt taatgaggct cagccggtgg
     3901 cgcggaccct ttgcgggccc tccacgacgg acggcccggc gctgccgatc gcctcctccg
     3961 accgggcctc gacaatctcg cgtagcgcgc agcgcgaccg tgcaacctct tgcaccttgc
     4021 cgtcgagggt cgccagcgcc tcgaccacct tcgggggcag cacgggactg gccacgacag
     4081 cggtccctgc gccaatttgc gcttcggaac caggccgggc ggcgaacacg atcggcccgg
     4141 ccggccgcgc gctgcgaaac tcctcggcaa ccatccatcc gtcgacgagg cccggcaaat
     4201 cgacctccgt gaaaacggcg tcgatgcgac cgcgctcgcg catcaaggtg agcagggcct
     4261 gctcgccggt gccggcgcag acggcctcgt agccggccat gcgcaacagg tccgacagga
     4321 tgccgctggc gatcggttcg ccctcgacga cgaggatgcg cggttggctg gtgctggcag
     4381 ggttcatcga tggtcccgat ttgacgctcg ggacgagacc ctggggaggg atggttaacg
     4441 aaacgttaac gcgactggct gctcattgcg caggcggccc gccgcggggc cgtggctcag
     4501 cggcacaacg tcacgcggcg gacgatccag ccggagtcgg tccagagctt cttgcgggcc
     4561 ttggcgcagc ccgcgtcccc gtgggtggag gccgtgcctc ccgggtcggc cccggccgtc
     4621 ccggcgccgt tcgatgccgg cgcctgggcg taggcggcgc gcgcgctctt ggcagcggcg
     4681 gcttgggaag gcccggctgc caggatcggg acaagcaata cggcggcaat gggcgccacg
     4741 gcccatctca agacaattcc gttcaagacc agcacactcc gcactgatgg catcttctat
     4801 gagctgacgg ggtgcaaggc gcatgcgagg cccggcgggc tcgggcaaag cccgcgcctc
     4861 cgtgccgaca tgcaccatgt tcgatgagcc gcctggcgac cctttaaccc caccatcggc
     4921 tccgccgaaa cagctttgcc gtagaggccg caacagaatt tcttccttgg gttgccgggt
     4981 cggcgagcgg cgcctcgtcc gaaccggcgg tccacaacct tcatgcgcgg ctccgccatg
     5041 aaaaggacgt ggttttcgcg tccacagcgc cttatctaac ccccgatccc gtccaagctc
     5101 cgaatgtggc ctgccgcggg ccgccgcaca cccgtcatga atgcccctgc ccccaagatt
     5161 tctttcgtct cgctcggctg cccgaaggcg ctggtcgatt ccgaacgcat catcacgcag
     5221 ctgcgcgccg aaggttacga gctcaccaag aagcacgccg gcgccgacct cgtgatcgtc
     5281 aacacctgcg gcttcctgga cagcgccaag gccgagtcgc tcggcgccat cggcgacgcg
     5341 ctcagcgaga acggcaaggt gatcgtcacc ggctgcatgg gggccgagcc gggcgagatc
     5401 cgcgaccgct tcccgaatgt gctcgccgta acggggccgc agcaatacga gagcgtcgtc
     5461 gccgcggtgc acgaggccgc tccgccggcg catgacccgt ttttcgacct cgttccgccg
     5521 caaggggtca agctgacgcc gcggcactac gcctatctga agatttccga aggctgcaac
     5581 aaccgctgct cgttctgcat catcccgaag ctgcgcggcg acctcgtgag ccgcccagcc
     5641 ggcgacgtgc tgcgcgaggc cgagcgcctc gtcaaagccg gcgtcaagga aatcctcgtc
     5701 atctcgcagg atacgagcgc ctacggcatt gatctcaaat acgccgcg
//
LOCUS       DATAIQ010000629         1650 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_448171, whole genome shotgun sequence.
ACCESSION   DATAIQ010000629 DATAIQ010000000
VERSION     DATAIQ010000629.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1650)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1650)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1650
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_448171"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            210..470
                     /locus_tag="VHN20_10450"
     CDS             210..470
                     /locus_tag="VHN20_10450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018455213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726229.1"
                     /translation="MTHDIEQDRLERAREGRTLARADQDITEGERRVAAQLLLIEQLR
                     ADGHDTRLAEKLLAGLEATLTEWRTHRELIIQRIAQLNSRLL"
     gene            653..961
                     /locus_tag="VHN20_10455"
     CDS             653..961
                     /locus_tag="VHN20_10455"
                     /inference="COORDINATES: protein motif:HMM:NF015925.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HEX2726230.1"
                     /translation="MFIRITWGKLKPGAWDDYEAAFRKVMPQTMGAPGIRGRWLIRDL
                     DETDAGYSIAMFENERDMRSYTENAEVRAAIRQALDPFHMGEYTTKHCEVKVELGPTS
                     "
     gene            complement(1058..1360)
                     /locus_tag="VHN20_10460"
     CDS             complement(1058..1360)
                     /locus_tag="VHN20_10460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018098581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2934 domain-containing protein"
                     /protein_id="HEX2726231.1"
                     /translation="MDDLVDEAIDETFPASDPPSYMAGAGILGAPSHSGIVREPAVTE
                     LRESDEHHPDTGERRIRERARRIWEAEGRPEGRADEHWRRAQDELAGEDANKPRQS"
     gene            1565..>1650
                     /locus_tag="VHN20_10465"
     CDS             1565..>1650
                     /locus_tag="VHN20_10465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007798947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-binding negative transcriptional regulator"
                     /protein_id="HEX2726232.1"
                     /translation="MHQPPHFREDRLEIQHDLIRAHPFALLIT"
BASE COUNT          287 a          567 c          547 g          249 t
ORIGIN      
        1 cagggcaagc cgcgccaacg ggttagcgcg atcggcggca gcgccacgct aacgtgttcg
       61 ccgcggctct ggtcaagggg ccagccccga gcgtatgctg gacgcgcaga ggacagggcc
      121 ggatcgcttc ggccctgtcc agaggcgcat gatctcgttc gacaaggtgc cgccccatcc
      181 ctggatcatg cccaggatga cgcctgacga tgacgcacga tatcgagcag gatcggctcg
      241 agcgcgcccg cgaaggccgg acgctggccc gggccgatca ggacatcacc gaaggcgagc
      301 ggcgcgtggc ggcgcaactg ctgctcatcg agcagctgag ggcggacggt catgacacac
      361 ggctagcgga gaagctgctg gcggggctcg aggcgacgtt gaccgaatgg cgcacgcatc
      421 gcgagctgat catccaacgc atcgcccagc tcaatagccg gctcttgtag cccccgtcgg
      481 cggccgccca tggccgcgcc ctcctccttt gccgttcagc catttgccgc ggcgcgctcg
      541 cattcggcgc gaggctgacg gaccggccga gagggccaac gctctcccgc gggcaggcga
      601 accgggctat cgtgggcggg cactcgatcg ctcaggaaaa acggaggaga cgatgttcat
      661 ccgaatcacg tggggcaagc tgaaacccgg cgcgtgggat gattacgaag cagccttccg
      721 gaaggtcatg ccgcagacca tgggcgcgcc cggcatccgc gggcggtggc tgatccgcga
      781 tctcgacgag accgacgccg gctactcgat cgccatgttc gagaacgagc gcgacatgcg
      841 ctcctacacc gagaacgcag aggtgagggc tgcgatccgg caggcgctcg acccgttcca
      901 catgggcgaa tacaccacca agcattgcga ggtgaaggtc gagctcgggc cgacatcgta
      961 gagccggacg ccccccttcg ccggggatgg tttttggcaa cgcgcatttt cggtggcgaa
     1021 ccgggcccgc ttgggcggaa aagccggaac gggcaactca actctggcgc ggcttgttcg
     1081 cgtcctcgcc cgccagctcg tcctgcgcgc gccgccagtg ctcgtcggcg cggccctcgg
     1141 gccgcccttc cgcttcccat atgcgccgcg cgcgctcacg gatgcggcgt tcgcccgtat
     1201 ccggatgatg ctcatcgctt tcgcgcagct cggtgacggc gggctcgcgc acgatgcccg
     1261 aatgggacgg cgccccgaga attcccgcac cggccatgta cgacggcggg tcgctcgccg
     1321 gaaaggtctc atcgatggcc tcgtcgacca gatcgtccat cttcttcgtt gccatggtcg
     1381 cctcgatgtc acgcgcctac caacgcacga cgcctgcagt ggttcgctcg acgctcaacg
     1441 tcgacaccag ggcggcagag ttgccaagac ggccgcggat tgccgcacgc gcgcagggac
     1501 ttgcccgcgt ccgcttgatc tggaacgtca aagacgggag ccacgggcga ggagggcaag
     1561 gaccatgcac cagccgccac acttccgcga ggaccgtctc gagatccagc acgatctcat
     1621 ccgcgcgcac ccattcgccc tgctgatcac
//
LOCUS       DATAIQ010000630         5701 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_310294, whole genome shotgun sequence.
ACCESSION   DATAIQ010000630 DATAIQ010000000
VERSION     DATAIQ010000630.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 5701)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5701)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5701
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_310294"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(231..2267)
                     /locus_tag="VHN20_10470"
     CDS             complement(231..2267)
                     /locus_tag="VHN20_10470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012113855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HEX2726233.1"
                     /translation="MNRLANATSPYLLQHKDNPVAWQEWGPDAFAEAQSANKPILLSV
                     GYAACHWCHVMAHESFEDPDVAALMNELFVNIKVDREERPDVDHVYMNALHILGEQGG
                     WPLTMFLTPAGEPFWGGTYFPKEPAFGRPGFSQVLREVARVFHTERHRIDHNRALLTE
                     KLREGHTPASDGVVSIGLKDLDRLGARLVDLFDRAHGGIKGAPKFPNPTILEALYRYA
                     RRSGDAEARDRALVTLERMARGGIHDHLGGGFARYSVDERWLVPHFEKMLYDNAQLLE
                     LYAVAAQDTGSPLLRSAAEGVVAWLEREMLTGEGAFASSLDADTEGEEGRFYVWSLAE
                     LRAALGDDADLFAQVYDVSDVGNWEHTNILNRLLSGEADPATEERLADMRTRLLARRA
                     GRVRPGLDDKILADWNGLMIAALVRAALALDQPDWIKLAQRAFGFIVGAMAKGGQLGH
                     SWRAGALVFPGFALDHAAMMRAAIALHEATGEATYLDHARTWRDSLAHQYRVPETGLL
                     AMTAANGEDLIVRPQPIHDDAVPNANGVFAEALVRLAAVTGSDEDRRLAGSTLAALAT
                     AAAAAPLGHMSILNALDLHLRGVTIIVVNDVKGTLRRAALRLPCLERVVSSFSDANAL
                     PDTHPAKELARTTHGPRALVCGGMRCSLPVAAPEDLARTAREMLIRDKQAAAQC"
     gene            2360..3685
                     /gene="mnmE"
                     /locus_tag="VHN20_10475"
     CDS             2360..3685
                     /gene="mnmE"
                     /locus_tag="VHN20_10475"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017485125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HEX2726234.1"
                     /translation="MTPIAMRSNTIFAVATGFGRAAITVIRISGPQTRFILETIAGGV
                     PEPRRLVLRRLRAPGSGEVLDQALVAWMPGPRSFTGEDQAELHVHGGVAARSAVVRAL
                     SRLPECHPAAPGEFTRRAFLNGRMDLSSVEGLADLIDAETEAQRRQALRQLEGALGGL
                     AEVWRERLIEALALLEAALDFSDEGDVPANLESAAALIVRDLATAVGGNLADARRGER
                     LRDGFMVVLAGPPNAGKSTLLNALARRDVAIVADIPGTTRDAIEVRCDLGGLPVVFVD
                     TAGLRQSEDPIEQAGMARTRARLGSADLTLWLIPPDGLAQAAPPVNGPVLRVATKADL
                     SGTAGAADVWVSAVTGAGLQSLLDRIEREAETALGQGDAVITRERHRAALTRAHDALG
                     RVAQALEEGQTELAAEDVRLAVRAIGEISGRVDVEQVLDRLFATFCIGK"
     gene            3793..5682
                     /gene="mnmG"
                     /locus_tag="VHN20_10480"
     CDS             3793..5682
                     /gene="mnmG"
                     /locus_tag="VHN20_10480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0002098 - tRNA wobble uridine modification
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HEX2726235.1"
                     /translation="MENSFDVIVVGGGHAGVEAAAAAARMGARTALVTHKAATIGAMS
                     CNPAIGGLGKGHLVREIDALDGVMGRIADRAGIQFRLLNRRKGPAVRGPRTQADRKLY
                     ARAMQAEIARTRNLTVIEGEADDVGLRGGRVAELVMTSGVRFSAGAVVLTTGTFLRGL
                     IHIGEVKIPAGRVGEHPALGLSRTLERFGFALGRLKTGTPPRLDGRTIDWAFVQTQEA
                     DDEPVPFSALTARITTPQVTCGITRTTAAVHDLIRANLHRAPMYSGDIQSRGPRYCPS
                     IEDKVVRFGDRDGHQIFLEPEGLDDATVYPNGISTSLPEDVQRAFLPHIPGLEKVRML
                     RPGYAIEYDYVDPRSLAPSLETKAIPGLFLAGQINGTTGYEEAAAQGLAAGINAALRS
                     AGQDGVVFDRAESYIGVLIDDLVTRGVTEPYRMFTSRSEYRLSLRVDNADERLTGKGI
                     AWGCVGSQRSERFASAQGELQAARKRLNQLAITPREASRHGFELNQDGVRRTAFQLLA
                     YPGITTRRLASIWPELGVISSPVAERLETDATYAVYLDRQASDIAAHRRDEGVVLPEG
                     LDFMALPGLSNEIRLKLDLVRPRTLGQAARIEGVTPAALTLLAAHARRSGRGPTDERF
                     GPVAN"
BASE COUNT          913 a         1869 c         1978 g          941 t
ORIGIN      
        1 gcgtgatcga cgcgatcgag ttcctgctcg acaagctgcg tcaaacgaag agcaacagcg
       61 atttcttcga ctcgatgaat acctgacggt gccacgggtc tcgggtaacc gagacggttc
      121 ggcagagatc gcgcgagccg ggagcatccg gctcgcgctt tttttgccaa tgcggtcacg
      181 tcggatgatg gcgccagctc acgacgtctt cgagaaatgc ggcgcgaagg tcagcactgt
      241 gcggctgcct gcttgtctct gatgagcatc tcgcgcgccg tcctcgcaag atcctctggc
      301 gcagcaacgg gaagcgagca gcgcatcccg ccacagacga gtgcacgcgg accgtgagtc
      361 gtccgggcga gctccttggc cggatgcgtg tccggcagcg cattggcatc gctgaacgag
      421 ctgaccaccc gttccaaaca gggaagacgc agcgcggccc gccttaacgt tccctttacg
      481 tcgttgacaa cgatgattgt cacgccgcgc agatgcaggt cgagcgcatt gaggatcgac
      541 atatggccga gcggggcggc ggcggccgcc gtcgcaagcg cggcaagcgt gctgcccgcc
      601 aggcgtcgat cctcgtcgct gccggtcacc gcggcgagac gcacgagggc ctccgcgaag
      661 acgccgttgg cgttcggcac ggcatcgtcg tggatcggct gcgggcggac gatcaggtcc
      721 tcgccgttgg ctgccgtcat cgcgagcagg cctgtctcgg gaacgcggta ttgatgggcg
      781 aggctgtcgc gccatgtgcg cgcatggtct aggtaggtgg cctcccctgt cgcctcgtgc
      841 agtgcgatgg ccgcgcgcat catcgccgcg tggtcgagcg caaatccggg aaagacgagc
      901 gcgccggcgc gccaggaatg gccgagctgc ccgcccttcg ccatggcgcc gacgatgaag
      961 ccgaatgcgc gttgcgcgag cttgatccaa tccggctgat cgagcgcgag cgccgcgcgc
     1021 acgagggcgg cgatcatcag cccgttccag tcggcaagga tcttgtcgtc tagtccgggg
     1081 cggacgcgcc ctgcgcgacg ggcgagaagc cgcgttcgca tgtcggcgag acgttcttcc
     1141 gtggctgggt ccgcctcgcc cgacaggagt cggttgagga tattggtgtg ctcccagttg
     1201 cccacgtccg aaacgtcata gacttgagcg aaaaggtccg catcatcgcc gagcgccgcg
     1261 cgcagctcgg caaggctcca gacgtagaag cgcccttcct cgccttccgt gtcggcgtcg
     1321 aggctggacg cgaacgcgcc ctcgcccgtg agcatctcgc gttcgagcca tgcgacgaca
     1381 ccctcggccg ctgagcgcaa caagggcgag ccggtgtcct gcgccgcgac cgcgtagagc
     1441 tcgagcagct gagcgttgtc gtaaagcatc ttctcgaaat gcgggacgag ccagcgttcg
     1501 tcgaccgagt agcgggcgaa gccgccgccg agatgatcgt ggatgccgcc gcgggccatg
     1561 cgctcgagcg tcacgagggc gcggtcgcgc gcctccgcgt cgccgctccg gcgggcatac
     1621 cggtagagcg cttccaatat cgtcgggttg ggaaatttgg gggcgccttt gatcccgccg
     1681 tgggcccgat cgaacaggtc gacgagacgc gcgccgaggc gatcgaggtc cttgagcccg
     1741 atggacacga cgccgtcgct cgcgggtgtg tgaccttccc tcagcttttc ggtgagcagc
     1801 gcgcggttgt gatcgattcg gtgccgttcc gtgtgaaaga cccgcgccac ttcgcggagc
     1861 acctgggaga agccagggcg cccgaaagcg ggctccttcg gaaagtaggt gccaccccag
     1921 aacggctcgc ccgcgggtgt gaggaacatc gtcaggggcc acccaccctg ttcgccgaga
     1981 atgtggagcg cgttcatgta gacgtgatcc acgtcggggc gctcctcccg atcgaccttg
     2041 atgttgacga acaactcgtt catcagcgcc gcgacgtccg ggtcctcgaa gctttcatgg
     2101 gccatcacgt ggcaccagtg gcaggcggcg tatccgaccg atagaaggat cggcttgttc
     2161 gcggactgcg cctcggcgaa ggcgtcgggc ccccattctt gccaggcgac cgggttatcc
     2221 ttgtgttgga gcagataagg cgaggtggcg ttggccagtc ggttcatcgg gcgtgctcgc
     2281 aggccggcgg aaagaatcgt aaagacctgc tcaccccttc tcaacaaacg ctaacgggaa
     2341 taggtccggg gtcggcgcca tgacgccaat cgcaatgagg tcgaacacga tctttgccgt
     2401 cgcgacgggt ttcggccgcg ccgcgatcac ggttatccgg atcagcggcc cgcagactcg
     2461 attcatcctc gaaacgattg ccggcggcgt tcccgagccg cggcggctcg tgctgcggcg
     2521 gctccgggcg cccggttccg gcgaggtgct cgaccaagcg ctcgtcgcat ggatgcctgg
     2581 accgcgtagc tttacgggtg aggaccaagc cgaacttcat gtccacggcg gcgtggcggc
     2641 ccgcagtgcg gtcgtgcgcg cactctcccg gcttcccgaa tgtcacccgg cggcgccggg
     2701 cgaattcact cgccgcgcct ttctgaacgg ccgcatggac ctcagcagcg tcgagggtct
     2761 cgcggacctg atcgatgccg aaacggaagc gcagcggcgt caggcgttgc gccagcttga
     2821 aggcgccctt ggcggcttgg ccgaggtatg gcgggagcgg ctgatcgagg cgctggcgct
     2881 gctcgaggcc gccctcgact tctccgacga gggggacgtt ccggctaacc tggaaagcgc
     2941 tgccgcgttg atcgtgcggg acctcgccac ggcggtcggc ggaaacctcg ccgacgcacg
     3001 gcggggcgag cgtctgcgcg acggcttcat ggtggtcctg gccgggccgc cgaacgcggg
     3061 caagtcgaca ctactgaacg ccctggcccg ccgcgacgtg gcgatcgtag ccgacatacc
     3121 gggcacgacc cgcgacgcga tcgaggtgcg ctgcgacctt ggggggctgc cggtcgtctt
     3181 cgtcgacacg gcggggctgc ggcagtccga ggacccgatc gagcaagcag gcatggcgcg
     3241 tacgcgtgcc cggctcggca gcgccgacct caccctctgg ctcatccccc cggacggttt
     3301 ggcgcaggcc gcccctcccg tgaacgggcc ggtgcttagg gtggcgacga aagccgacct
     3361 gtcgggcacc gcgggcgccg cggatgtttg ggtgtcggca gtgacgggtg ccggcctgca
     3421 atcgttgctg gaccggatcg aacgtgaggc ggagactgcc cttgggcaag gggatgcggt
     3481 gatcacgcgc gagcggcacc gggccgcgct gacgcgcgcc cacgatgccc tcggccgcgt
     3541 cgcgcaggcc ctcgaggaag ggcaaacgga gctggccgcg gaggacgtcc gtcttgccgt
     3601 gcgcgccatt ggggagatca gcgggagggt cgacgtcgag caggtgctgg accgcctgtt
     3661 cgcgacattc tgtatcggca agtgatgttt cacgtgaaac gtggttagcg cttagccccc
     3721 ggctatttcg ttgcgacgac gggatttcgt ctgccggtga aagccattat gtgaggcgcc
     3781 ttggtggatc tgatggaaaa ctcattcgac gtgatcgtgg tcggcggcgg ccatgccggg
     3841 gtcgaggccg cggctgcggc ggcgcgcatg ggcgcgcgca cggccctcgt cacgcacaag
     3901 gcggcgacga tcggcgccat gtcgtgcaat cccgccattg ggggactggg gaagggacat
     3961 ctggtgcgtg agatcgatgc cctcgacggc gtcatggggc gcatcgccga ccgcgcaggc
     4021 atccagttcc ggctgttgaa ccggcgcaag ggcccggcgg tgcgcgggcc gcgcacgcag
     4081 gccgatcgca agctgtatgc ccgcgccatg caggccgaga tcgcccggac gcgcaacctg
     4141 actgttattg aaggcgaggc cgatgatgtc gggctccggg ggggccgcgt cgccgaactg
     4201 gtgatgacga gcggcgtcag gttttcggcg ggagcggtcg tgctcacgac cggcacgttc
     4261 ctgcgggggc tgattcacat cggggaggtc aagatcccgg ccggacgcgt gggcgagcat
     4321 ccggccctcg ggctgtctcg gacgctcgag cgctttggct tcgcactcgg gcgcctcaag
     4381 accggcaccc ctccccggct cgacggccgc acgatcgact gggccttcgt tcagacccag
     4441 gaagcggacg acgagccggt cccgttttcg gcgctcaccg cacgcatcac caccccccag
     4501 gtgacctgcg ggatcacgcg gacgaccgcg gccgtgcacg acctgatccg ggcgaacctg
     4561 caccgcgcgc cgatgtattc cggcgacatc cagagccgcg gcccgcgcta ctgcccatcg
     4621 atcgaggaca aggttgtgcg cttcggcgat cgcgacgggc accagatctt tctagagccc
     4681 gaaggcctcg acgacgcaac cgtctacccg aacggaatct ccacctcgct gccggaggac
     4741 gtgcagcggg ccttcctgcc gcacatcccc gggctcgaga aagtccgcat gctgcgcccc
     4801 ggctatgcga tcgaatacga ctatgtcgat cctcggagcc tcgcgccgtc cctcgaaacg
     4861 aaggcgatcc cggggctgtt cctggccggg cagattaacg gcacgaccgg ctatgaagag
     4921 gccgccgcac aaggcttggc cgcaggcatc aatgcggcgt tgcggtccgc cggccaggac
     4981 ggcgtcgttt tcgaccgggc cgagtcgtat atcggggtgc tgatcgacga tctcgtgacc
     5041 cgcggggtca ccgagcctta ccgaatgttt acctcacgtt ccgaataccg gctcagcctg
     5101 cgtgtcgaca acgctgacga gcggctgacc ggcaagggaa ttgcctgggg ctgcgtcgga
     5161 tcccaaaggt ccgagcgctt cgccagtgcc cagggtgagt tgcaggcggc gcggaagcgg
     5221 ctcaatcagc ttgccattac cccgcgcgaa gcttcccggc acgggtttga gctgaaccag
     5281 gacggggtgc gccggacggc tttccaactg ctcgcttatc cgggaatcac cacccggcgc
     5341 ctggccagta tctggccgga actgggcgtc atctcctccc cggtcgctga gcgccttgag
     5401 acggacgcca cctatgctgt ctatctcgac cgccaggcct cggacatcgc ggcgcaccgc
     5461 cgggacgaag gcgtcgttct tccggaaggt ctcgatttca tggccctgcc cgggctctcg
     5521 aacgagatca ggctgaagct tgacctggtg cgcccgcgca cactcggaca ggccgcccgg
     5581 atcgagggcg ttactcccgc ggcgctcacc ctcctcgcgg cccatgcccg gcgatccggg
     5641 cgcgggccga ccgacgagcg attcgggccc gtagcgaact gatctggcat gcggaccggc
     5701 c
//
LOCUS       DATAIQ010000631         5723 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_125929, whole genome shotgun sequence.
ACCESSION   DATAIQ010000631 DATAIQ010000000
VERSION     DATAIQ010000631.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 5723)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5723)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5723
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_125929"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..970)
                     /locus_tag="VHN20_10485"
     CDS             complement(<1..970)
                     /locus_tag="VHN20_10485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012330214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase (ATP)"
                     /protein_id="HEX2726236.1"
                     /translation="MENLGVHNSAHGAKPFGFRKLKRVYWNLGAPALYEHSLTRGEAQ
                     LIQGGAINADTGIHTGRSPKDKFTVRDANTENEVWWENNGAITPAQFDVILADFLKHC
                     EGKELFAQDLYGGADPAHRVKARVYTEYAWHSLFIRNLLIRPDMSELAAYVPDLTIID
                     LPSFKADPKRHGCRSETIIAVDLTRKIVLIGSSSYAGEMKKSVFTYLNYVLPKQGIMP
                     MHCSANVGEKGDTALFFGLSGTGKTTLSSDPERILLGDDEHGWSRDGIFNFEGGCYAK
                     TINLSRDAEPDIYATTERFGTVLENVVVDPVTRCPDYNDASKTENTR"
     gene            complement(1129..1869)
                     /locus_tag="VHN20_10490"
     CDS             complement(1129..1869)
                     /locus_tag="VHN20_10490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020173386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2470 domain-containing protein"
                     /protein_id="HEX2726237.1"
                     /translation="MTQTPRPPAEFDGIPVARQLLRTIRAGALATLDKEAGFPFASLV
                     TVATDPDGSPLLLISRLAAHAGNLEADPRASILLAQGGKGDPLAHPRLTVTGRVARTA
                     EPRVRSRFLARHPKASLYADFGDFSFWRMEIAGGHLNGGFARAMSLSPEQMRTELGGA
                     GELVAIEESAVSHMNEDHREALALYATRLAGAPAGEWRTTGVDPDGIDLAAGDLTARV
                     EFDRRVVNGGELRKVLHEMAERARNIAS"
     gene            2037..2735
                     /locus_tag="VHN20_10495"
     CDS             2037..2735
                     /locus_tag="VHN20_10495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011662269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX2726238.1"
                     /translation="MPTIALVDDDRNILTSVSIALEAEGYRIQTYTDGASALDGLRHS
                     PPDLAIFDIKMPRMDGMELLRRLRQKSDLPVIFLTSKDEEIDELFGLKMGADDFIRKP
                     FSQRLLVERVKAVLRRFAPKDQVAPRETDAKVLERGQLIMDPERHTCTWNGEPVTLTV
                     TEFLILQALAQRPGVVKSRNALMDAAYDDQVYVDDRTIDSHIKRLRKKFKVVDQNFEM
                     IETLYGVGYRFKET"
     gene            2767..4545
                     /locus_tag="VHN20_10500"
     CDS             2767..4545
                     /locus_tag="VHN20_10500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019403631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stimulus-sensing domain-containing protein"
                     /protein_id="HEX2726239.1"
                     /translation="MSAEPLNLEAPAEVERRPSGFLTRLRSLGRGLSLRASSSLTRRI
                     VVLNLAGLFALLLGFLYLNQFRKGLIEFRVESLFTQGEIIAGAIAASATVEPDTITID
                     PDRLLQMQAGETSGLGEETLPSLEFSINPERVAPLLGRLVSPTRTRARIYDKEGTLLL
                     DSRTLYPRGDVVRLDLPPLKKDDTAVERTWNAIRKRFSTSSEVPPYEEIGPILGRTLP
                     EVDNALSGKRWSVVRPNDRGETIVSVAVPIRRFQTVRGALLMSTQGGDIDPIIASERF
                     GLLQVFLIAALVMVVVSVIFAGAIVVPVRRLAEAAERVRRGIKSRQEIPDFTGRSDEI
                     GHLSGALRDMTRALYNRIDAIESFAADVAHEIKNPLTSLRSAVETLPLARSDDSRARL
                     MSIIQHDVKRLDRLISDISDASRLDAELARADAEPVDIAKLLDAVVTLANERRLADDA
                     YVRLHVEPHPKGRDAFFVAGHDNRLGQVVNNLVDNARSFSAPMGDVRVVLRRTRADVE
                     IVVEDDGPGIPPHALERIFERFYTDRPDDQGFGQNSGLGLSISRQIVEAHRGRIRAEN
                     RLGPPGEDGEPTRLGARFIVHLPAAA"
     gene            4575..5003
                     /locus_tag="VHN20_10505"
     CDS             4575..5003
                     /locus_tag="VHN20_10505"
                     /inference="COORDINATES: protein motif:HMM:NF019118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPr kinase/phosphatase C-terminal
                     domain-containing protein"
                     /protein_id="HEX2726240.1"
                     /translation="MSVGEAGILIRGPSGAGKSTLARELVDEADRRGQFARLVCDDRV
                     RLENRSGRLVASAVNEIAGKIEARGVGILQMPYERSAVVRLVVDGLLEESQRFPEEGE
                     STTTICGVHLPRIATRVGPGVAALVLLQLGNLRGVKVAEL"
     gene            5089..5490
                     /locus_tag="VHN20_10510"
     CDS             5089..5490
                     /locus_tag="VHN20_10510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003606016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1902495 - transmembrane transporter
                     complex [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HEX2726241.1"
                     /translation="MIGMVLVTHGQLATEFKSALEHVVGPQGQLETITIGPEDDMETR
                     RKDIMAAVCRVNSGEGVVVLTDMFGGTPSNLALSCMNGGSVEVVAGINLPMLIKLASV
                     RDEEPLADAVLHAQEAGRKYINVASRVLAGK"
     gene            5498..>5723
                     /locus_tag="VHN20_10515"
     CDS             5498..>5723
                     /locus_tag="VHN20_10515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017486885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HPr family phosphocarrier protein"
                     /protein_id="HEX2726242.1"
                     /translation="MPDQPNAGECPPSEVPDGVLVRELLITNKKGLHARASAKFVQMV
                     ERFDAEVTVTRCGETVGGRSIMGLLTLGAAQ"
BASE COUNT          950 a         1899 c         1874 g         1000 t
ORIGIN      
        1 agcgtgtgtt ctcggtcttc gaggcgtcgt tatagtcggg gcaccgcgtc accggatcga
       61 ccacgacgtt ttccagcacc gtgccgaagc gctcggtggt cgcgtagatg tcaggctcgg
      121 catcgcgcga gaggttgatc gtcttggcgt agcagccgcc ctcgaaattg aagatgccgt
      181 cgcgactcca gccgtgctcg tcgtcaccca ggagaatgcg ctcgggatcg ctcgacagcg
      241 tcgtcttgcc ggtgcccgaa agtccgaaga acagggccgt gtcgcccttc tcgccgacat
      301 tcgccgagca atgcatcggc atgatgccct gcttgggcag gacgtaattg aggtaggtga
      361 acaccgactt cttcatctcg ccggcataag acgaggagcc gatcagcacg atcttgcgcg
      421 tcaggtcgac ggcgatgatg gtttcggagc ggcagccgtg ccgcttggga tcggccttga
      481 acgagggcag gtcgatgatc gtgagatccg gcacatacgc ggccagctcg ctcatgtccg
      541 gccggatcag caggttgcgg atgaacagcg agtgccaggc gtattcggta tagacgcgcg
      601 ccttgacccg gtgggccggg tcggcgccgc cgtaaaggtc ctgcgcgaac agttccttgc
      661 cttcgcaatg cttgaggaaa tcggccagga tcacgtcgaa ctgggccggc gtgatggcgc
      721 cgttattctc ccaccagacc tcgttctcgg tattggcgtc gcgcaccgtg aacttgtcct
      781 tcggcgagcg tccggtatgg atgcccgtgt cggcgttgat cgccccgccc tggatcagct
      841 gcgcctcgcc ccgcgtcagg gagtgctcgt agagcgccgg agcgccaaga ttccagtaga
      901 cgcgtttgag cttacggaag ccgaacggct tggcaccgtg cgccgaattg tgcacgccga
      961 ggttttccac gggcgtctcc ttctgattgc gtccaccggg tgggacgggc tgttgctggc
     1021 gccgcgatat gaacgggtgg gcggcgctcg atagccgccc acgcgctccc gctcaagctc
     1081 tagtttcaat aggaccgggc ggcccctcgt caatatcttt cgacatggtt acgaggcgat
     1141 gttgcgggcc cgctcggcca tctcgtgcag gaccttgcgc aactcgccgc cattcaccac
     1201 gcgccggtcg aattcgaccc gcgccgtgag gtcgccggcg gcgaggtcga tgccgtcggg
     1261 atcgaccccg gtcgtgcgcc actcgccggc gggcgcgccg gcgaggcgcg tcgcgtaaag
     1321 cgcgagggcc tcgcgatggt cctcgttcat gtgcgacacg gcgctctcct cgatggcgac
     1381 gagttccccg gcgccgccga gctcggtgcg catctgctct ggcgagaggc tcatggcgcg
     1441 ggcgaaaccg ccgttcagat ggccgccggc gatttccatg cgccagaagg agaaatcccc
     1501 gaaatccgcg taaaggctgg ctttcggatg ccgggccagg aagcgtgacc gcacgcgcgg
     1561 ctcggccgtc ctcgccaccc gcccggtcac ggttaaccgc ggatgggcca ggggatcgcc
     1621 cttgccgccc tgggccagca ggatcgaggc gcgcgggtcc gcctccaggt tgccggcatg
     1681 ggcagcgagc cgcgatatga ggaggagggg cgagccgtcg ggatcggtcg ccaccgtgac
     1741 cagggaggcg aaggggaagc cggcctcctt gtccagggtc gccagggccc cggcgcgaat
     1801 cgtgcggagg agctgcctgg cgacgggaat tccgtcgaat tcggcagggg ggcgcggcgt
     1861 ctgggtcatg gcctcggtcc tggggccttc cgcccgcata tggcggttcc ggccaaaaag
     1921 tcttaaggag cgtcgggagc gacgcgattt gggctcgatt ccgcacctgc ggcatggccc
     1981 gccaagcgtc ttttgacaac catcagcggc agccacctgt tcgaggatgt ctctttatgc
     2041 ccaccattgc cctggtcgat gacgatcgca atatcctgac ctcggtttcg atcgccctcg
     2101 aggcggaggg atatcgcatc cagacctata cggacggcgc ctcggccctc gacggcctca
     2161 ggcattcgcc gcccgatctc gccatcttcg acatcaagat gccgcgcatg gacggaatgg
     2221 agctgctgcg ccggctgcgg cagaaatctg atctgcccgt gatcttcctg acatccaagg
     2281 acgaggagat cgacgagctg ttcggtctca agatgggcgc cgacgacttc atcaggaagc
     2341 cgttctcgca acgtctcctc gtcgagcgcg tcaaggccgt gctgcgccgc ttcgcgccga
     2401 aggaccaggt cgccccgcgc gagaccgacg ccaaggtcct cgagcgcggc cagctcataa
     2461 tggatcccga gcggcacacc tgcacgtgga acggcgagcc ggtcacgctc acagtgaccg
     2521 aattcctgat cctgcaggcg ctcgcgcaac gccccggtgt ggtcaagagc cgcaacgcct
     2581 tgatggacgc cgcctatgac gaccaagttt atgtcgacga ccgcaccatc gacagccaca
     2641 tcaagcgcct gcgaaagaag ttcaaggtcg tcgatcagaa cttcgagatg atcgagacgc
     2701 tttatggcgt cggctatcgc ttcaaggaaa catgagcgcg ggagcattgc gctgctgcaa
     2761 aggcgaatgt cggccgagcc gctgaatctc gaagcgcccg cggaagtgga gcgccgcccg
     2821 agtgggttcc tcacccggct cagatcgctg ggtcgcggac tgtcgctgcg cgcctcgtcg
     2881 agcctgacgc gtcgcatcgt cgtgctcaac cttgccgggc ttttcgcgct gctgctcggg
     2941 tttctttacc tcaaccagtt ccgcaagggc ctgatcgagt ttcgggttga gagcctgttc
     3001 acgcaaggcg agatcatcgc cggcgccatc gccgcatcgg cgacggtcga gcccgacacc
     3061 atcaccatcg accccgaccg gctgctgcag atgcaggccg gcgaaacctc gggcctcggc
     3121 gaggagacgc tgccctcgct cgaattctcg atcaacccgg aacgcgtcgc cccgctgctc
     3181 gggcggctcg ttagcccgac gcgcacgcgc gcgcgcattt acgacaagga aggcacgctg
     3241 ctgctcgatt cgcgcacgct ttatccgcgc ggcgacgtgg tgcgcctcga tctgccgccg
     3301 ctcaagaagg acgataccgc cgtcgagcgt acctggaacg cgatccgcaa gcgcttctcg
     3361 accagcagcg aggttccgcc ttacgaggag atcggcccca ttctcggacg aaccttgccg
     3421 gaggtggaca acgcgctttc cggcaagcgc tggagcgtgg tcaggccgaa cgaccgcggc
     3481 gaaaccatcg tctcggtggc tgtgccgatc cgccgcttcc agaccgtgcg cggcgcgctt
     3541 ctgatgtcga cgcagggcgg cgacatcgat ccgatcatcg cgtccgaacg cttcgggctt
     3601 ctccaggtct tcctgatcgc cgcgctggtg atggtcgtcg tgtcggtgat cttcgccgga
     3661 gccatcgtgg tgccggtgcg ccgtctcgcg gaagctgccg aacgcgtgcg ccgcggcatc
     3721 aagtcccgcc aggagattcc cgacttcacc ggccgctccg acgagatcgg ccacctgtcc
     3781 ggcgcgctgc gcgacatgac gcgggcactc tacaaccgca ttgacgcgat cgagagcttc
     3841 gccgccgatg tcgcccacga gatcaagaac ccgctgacgt cgctgcgcag cgccgtcgaa
     3901 accctgcccc tcgccaggag cgacgactcg cgcgcgcggc tgatgtcgat catccagcac
     3961 gacgtgaagc ggctcgaccg cctgatcagc gatatttccg atgcctcgcg cctcgatgcc
     4021 gagttggccc gcgccgacgc cgagccggtc gacatcgcca agcttctcga cgcggtcgtc
     4081 accctcgcca acgagcgccg tctcgccgac gacgcctatg tcaggctgca cgtcgagccg
     4141 catccgaagg ggcgcgacgc tttcttcgtg gccggccatg acaaccggct tgggcaggtc
     4201 gtcaacaacc tcgtcgacaa tgcccgctcg ttctcggccc cgatgggcga cgtgcgcgtc
     4261 gtcctgcgcc gcaccagggc ggacgtggag atcgtcgtcg aggacgacgg cccgggaatc
     4321 ccgccgcacg ccctcgagcg catcttcgag cgcttctaca ccgaccggcc cgacgatcag
     4381 ggcttcggcc agaactcggg cctcggcctc tcgatctcgc gccagatcgt cgaagcccac
     4441 cgcggccgca tccgcgccga aaatcgcctc ggcccgccgg gcgaggacgg cgagccgacg
     4501 cgcctcggcg cccgcttcat cgtgcacctg ccggccgccg catgagttcc gggatcgcct
     4561 tgcacgcaag ctgcgtgagc gtcggcgagg ccgggatcct gatccggggg ccttccgggg
     4621 ccggcaagtc gacccttgcc cgggaactcg tcgacgaggc cgaccggcgc gggcaattcg
     4681 cgcggctcgt ctgcgatgac cgcgtgcggc tcgagaacag gagcggccgc ctggtcgcca
     4741 gcgccgttaa cgaaattgcc ggaaagatcg aggcgcgcgg cgtcggcatc cttcagatgc
     4801 cttatgagag atccgccgtg gtccggctgg tcgtcgacgg tcttctcgag gaatcgcaac
     4861 ggtttccgga ggaaggcgag agcaccacca ccatctgcgg cgtgcatctg ccccggatcg
     4921 caacccgggt cggcccgggc gtcgccgcgc tcgtgttgtt gcaacttggt aatcttcgcg
     4981 gcgttaaagt ggcggagtta tgagcatttc gtcgcattgc ccttgcgtac ggcttcgcag
     5041 tgcacaaaat agcggctccg ctcttcggag cgacgggaca gtttacccat gattggaatg
     5101 gtgctcgtca cccatggcca gctggcgacg gagttcaagt cagcgctgga acatgtggtg
     5161 ggaccgcagg gtcagctcga gacaataacc atcggtccgg aagacgacat ggagacgcgg
     5221 cgcaaggaca ttatggccgc ggtctgccgc gtcaattcag gcgaaggggt tgtcgtgctg
     5281 accgatatgt tcggcggcac gccgtcgaat cttgcgctgt cctgcatgaa tggcggctcg
     5341 gtcgaggtcg tggccgggat caatttgccg atgctgatca agcttgccag cgtgcgcgac
     5401 gaggagccgc tcgccgacgc cgtgctgcac gcccaggaag ccggccgcaa atacatcaac
     5461 gtcgcttcgc gggttctggc cggcaagtaa gctttccatg cctgaccaac ccaacgcggg
     5521 cgagtgcccc ccatccgagg tgcccgacgg ggtcctggtc cgcgagcttc tgatcaccaa
     5581 caagaaaggc ctgcacgccc gtgcgtcggc caagtttgtg cagatggtcg agcgcttcga
     5641 cgccgaggtc accgtgaccc gctgcggcga gaccgtcggc ggccgctcga tcatgggcct
     5701 tctgaccctc ggcgccgcgc agg
//
LOCUS       DATAIQ010000632         2457 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_448309, whole genome shotgun sequence.
ACCESSION   DATAIQ010000632 DATAIQ010000000
VERSION     DATAIQ010000632.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2457)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2457)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2457
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_448309"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1296
                     /locus_tag="VHN20_10520"
     CDS             <1..1296
                     /locus_tag="VHN20_10520"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX2726243.1"
                     /translation="FGIQEGQAASSGAQYVTALVEIGEVRRTATATGTLNATVNVEVG
                     SQLSGQIATLFVDFNDEVKKGQPLAQLDQKTFKARVAEAQAAIAIAEVGVEGATARVE
                     RARIDGQDSEAQRAVLKARTDNARVKLEAAKLELRRKESLRDRQTGSLVELADSETKV
                     ASASAALREAEAIAAAHENVIAGTKADLRRAQSELDTATASVPQRKALLQIAEIELER
                     TIIRSPVDGVVVGRNVNEGQTLATTLEAKTLFIIAGDLHQMEIHAKVDEADIGKIRVD
                     QEAVFSVDAHPGRQFTATVRQVRKAPQVQQNVVTYTVVLTAANPDNLLLPGMTAVVRI
                     TLSKTGPVLKMPLAALRFTPPGRSDPAPQGEVERGKPASVWLSDDGRELRPVVIGLGD
                     DDSSHVAILSGHVRAGDRVVVGEVVTAAPRQLFGIRIGL"
     gene            1300..2043
                     /locus_tag="VHN20_10525"
     CDS             1300..2043
                     /locus_tag="VHN20_10525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007611495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2726244.1"
                     /translation="MALLAAKELSRRYGRGSAVVDALKRTTFTVEQGEFVAIMGPSGS
                     GKSTLMSLIGLLDRPTSGSLNLAGEDVTALSHDRLAALRNRRIGFVFQAYNLLARHTT
                     VENVEMPLVYAGVRGSARRLKAGAALDTVGLSHRLDHWPGELSGGEQQRVAIARALVG
                     DPALILADEPTGALDSRTGLGILALFQALNRGGRTVIMVTHDEHVARHARRVLRLQDG
                     VLVSDDPVTEPIDAKAVIELERVVGMAAA"
     gene            2040..>2457
                     /locus_tag="VHN20_10530"
     CDS             2040..>2457
                     /locus_tag="VHN20_10530"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX2726245.1"
                     /translation="MMLRESLAIALRSLRANKVRSFLTMLGIIIGVASVITMVAVGAG
                     AQTQVAEQIRSLGANVLQVVPGAARQGAVRMESGSRHTLTEADATAIAARIPQVRAAA
                     ASVRGNAQLVAGARNWNTIVNGTTADYFTIREWPLAA"
BASE COUNT          402 a          850 c          849 g          356 t
ORIGIN      
        1 ttcggtatcc aggaaggaca ggctgcgtct tccggcgcac aatacgtgac cgccctcgtc
       61 gagatcggcg aggtgcgccg caccgcaact gcaaccggga ccctcaacgc caccgtcaac
      121 gtagaggtcg gatcgcagct ctccgggcag atcgcaacgc tgttcgtgga cttcaacgac
      181 gaggtgaaga agggtcagcc gctcgcccag ctcgatcaga agacgttcaa ggcgcgggtc
      241 gccgaggcgc aggccgcgat agccatcgct gaggtcggcg tcgagggtgc gaccgcgcgg
      301 gtcgagcgcg cacggatcga cgggcaggac agcgaggcgc agcgcgccgt tctcaaggcc
      361 cgcaccgata atgcgcgcgt gaagctcgag gcggcgaagc tcgagctacg ccgcaaggag
      421 agcctgcgcg accgccagac cggctcgctt gtcgagctgg cggactcgga gaccaaggtc
      481 gcttctgcct cggccgccct gcgcgaggcc gaggcgatcg ccgccgcgca cgagaacgtc
      541 atcgccggca ccaaggccga cctgcggcgc gcccaatctg agctcgacac cgcgacggca
      601 agcgtgccgc agcggaaggc gctgctccag atcgcggaga tcgagctcga gcgcaccatc
      661 atccgctcgc cggtcgacgg ggtcgtggtc gggcgcaacg tcaacgaggg gcagaccctc
      721 gcgaccacgc tcgaggccaa gaccttgttc atcatagccg gcgaccttca ccagatggag
      781 atccacgcca aggtcgacga ggccgacatt ggcaagatcc gcgtcgatca ggaagcggtc
      841 ttcagcgtcg acgctcatcc cggccgccag ttcaccgcaa ctgtgcgtca ggtgcgcaag
      901 gcgccgcagg tgcagcagaa cgtggtcacc tacacggtcg tgctgacggc ggcgaacccc
      961 gacaacctgc tgctgcccgg aatgacagcc gtcgtgcgga tcaccctcag caaaaccggg
     1021 ccggtgctca agatgcccct cgccgcgctt cggttcacgc cgcccggacg ctcggacccg
     1081 gcgccgcaag gagaagtcga gcgcggcaag ccggcatcgg tgtggctctc ggacgacggg
     1141 cgcgagctca ggcctgtcgt catcggtctt ggcgacgacg attcgagcca tgtcgcgatc
     1201 ctcagcgggc atgtgcgcgc gggggaccgg gtggtggtcg gcgaagtcgt gacggccgct
     1261 ccacgccagc tcttcggcat ccggatcggg ctttgagccg tggccctgct cgcggccaag
     1321 gagctgtcgc gccgctacgg cagaggcagt gccgtggtcg acgcgttgaa gcgcacgacc
     1381 tttaccgtcg agcaaggcga gttcgtcgcc atcatggggc cgtccggctc cggcaagtcg
     1441 acgctcatga gcctcatcgg tctgctcgac cggccgacct cgggctccct gaatctggcc
     1501 ggagaggacg tcaccgccct ttcgcacgat cgcctggcgg ccctgcgcaa ccggcgcatc
     1561 ggcttcgtgt tccaagccta caacctgctt gcccgtcaca cgaccgttga gaatgtcgag
     1621 atgccgctcg tgtacgcggg ggtgcgcggc tcggcacgac gtctcaaggc cggcgcggca
     1681 ctcgacaccg tcggcctgtc gcatcgtctc gaccactggc ccggggagct ctcgggcggc
     1741 gagcagcagc gcgtcgcgat tgcacgggcc ctcgtcggcg atccggcgct catcctcgcg
     1801 gatgaaccga ccggggctct cgacagccgc accgggctcg gcatcctcgc gctgttccag
     1861 gccctgaacc gcggcggccg cacggtcatc atggtgacgc atgacgagca cgtggcgcgc
     1921 catgcccgcc gcgtcctgcg gctgcaggac ggcgtgctcg tcagcgacga tccggtgacc
     1981 gagccgatcg acgcgaaggc cgtgatcgag ctcgaacggg ttgtcgggat ggccgctgca
     2041 tgatgcttcg cgaaagcctc gcgatcgcct tgcgctcgct gcgcgccaac aaggtgcgca
     2101 gcttcctcac catgctcggc atcatcatcg gggtcgcctc ggtgatcacg atggtggcgg
     2161 tcggcgccgg cgcgcagacc caggtcgccg agcagatccg atcgctgggg gcgaacgtgc
     2221 tccaggtggt gccgggcgcg gcgcgtcagg gtgcggtgcg aatggagagc ggctcgcggc
     2281 atacgctcac cgaggccgac gccaccgcga tcgcggcccg gatcccgcag gtgcgggccg
     2341 ccgccgcctc ggtgcgcggc aacgcccagc tcgttgccgg cgcgcggaac tggaatacga
     2401 tcgtcaacgg gacgacggcg gattacttca ccatccgcga gtggccgctc gccgccg
//
LOCUS       DATAIQ010000633         2157 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_402601, whole genome shotgun sequence.
ACCESSION   DATAIQ010000633 DATAIQ010000000
VERSION     DATAIQ010000633.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2157)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2157)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2157
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_402601"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..459
                     /locus_tag="VHN20_10535"
     CDS             <1..459
                     /locus_tag="VHN20_10535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726246.1"
                     /translation="DSATSPRVEPNLGPASVSSTPGTELRAAAAPASAAASTAVGAGE
                     TAPRAHAGLDQLSRIEDKTARIEEKYARAEALLQRVEASVEAATSRMHHVASQADLMA
                     VRDQVTATATYVRRLPGLTALALTAIVTSLLTAALVLVLQRYGLPWVLPR"
     gene            456..1646
                     /locus_tag="VHN20_10540"
     CDS             456..1646
                     /locus_tag="VHN20_10540"
                     /EC_number="2.7.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016842564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004618 - phosphoglycerate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HEX2726247.1"
                     /translation="MNFRTLDDVDVKGKRVLVRIDLNVPMEKGRVTDRTRIERVLPTI
                     QEVSGKGGRVILLSHFGRPKGRDAKDSLQPLAAELSEQLGRPVAFAADCIGDDAAKAA
                     KAMKDGDVLLLENTRFHAGEEKNDKAFVQELAKSGDIYVNDAFSAAHRAHASTEGLAH
                     VLPAYAGRAMQAELDALGKGLEAPRRPVVAVVGGAKVSTKIDLLENLVGKVEALVIGG
                     GMANTFLHAIGIGIGRSLAEPDLGATAQRIMDRAREKNCAVILPVDAVVAHEFKANAP
                     HHTYGIDAIPADGMILDVGSQSIERVNAAINEAATLVWNGPLGAFELTPFDQGTVAAA
                     RHAAERTRGGKLVSVAGGGDTVAALNHAGVADQFTYVSTAGGAFLEWLEGKPLPGVAA
                     LRQN"
     gene            1682..>2157
                     /locus_tag="VHN20_10545"
     CDS             1682..>2157
                     /locus_tag="VHN20_10545"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014498148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004332 - fructose-bisphosphate aldolase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I fructose-bisphosphate aldolase"
                     /protein_id="HEX2726248.1"
                     /translation="MNLDQLTKVAEAMVKPGKGILAADESSGTIAKRFEAIGVDSTAD
                     NRRDYRELLFRSSDAMRNHISGVILYDETLRQNAKDGTPLVKLIEQAGAIPGIKVDTG
                     AKPLPGCPGETITEGLDGLRERLKEYYGLGARFAKWRAVIDIGEGVPTWTAVKANA"
BASE COUNT          377 a          750 c          726 g          304 t
ORIGIN      
        1 gattccgcga cctcgccccg cgtcgagccg aaccttgggc cggcatccgt ctcgtcgacg
       61 cccggcaccg aactgcgggc cgccgcagcc ccggcttccg ccgccgcctc gacggcggtc
      121 ggcgcagggg agacggcgcc acgcgcccac gccgggctcg atcagctctc gcgcatcgag
      181 gacaagacag cccgcatcga agagaaatac gcgcgtgccg aagcgctgct gcagcgcgtc
      241 gaagcgagcg tcgaggcggc aaccagccgc atgcatcacg tcgccagcca ggccgatctc
      301 atggccgttc gcgaccaggt gaccgcgacc gcaacctatg tgcggcggct gcccggcctc
      361 acggccctgg ccttgacggc gatcgtgacg tcgctgctca ccgcggctct cgttctcgtg
      421 ctgcagcgtt atggattgcc gtgggttctt ccgcgatgaa ttttcgcacg ctcgatgacg
      481 tcgacgtcaa aggcaaacgc gttctcgtcc gcatcgacct caacgtgccg atggagaagg
      541 ggcgcgtcac ggaccggacc cgcatcgagc gggtgctgcc gacgattcag gaagtgtcgg
      601 gcaagggcgg cagggtgatc ctgctgtcgc atttcggccg gcccaagggc cgcgacgcga
      661 aggactcctt gcaaccgctc gccgcggagc tgtcggaaca gctgggcagg cccgtggctt
      721 tcgcggccga ctgcatcggc gacgatgcgg ccaaggccgc caaggcgatg aaggacggcg
      781 acgtccttct cctcgagaac acgcgcttcc acgccggcga ggagaagaac gacaaggcct
      841 tcgtccagga actggcgaag agcggcgaca tctacgtcaa tgacgcgttc tcggccgcac
      901 accgcgccca cgcctcgacc gaaggtctcg cccacgtgct gcccgcctat gcgggccggg
      961 ccatgcaggc ggagctcgac gccctcggca agggcctcga agcaccgcgc cgtccggtgg
     1021 tggccgtggt cggcggcgcc aaggtgtcga ccaagatcga tctgctcgaa aaccttgtcg
     1081 gcaaggtcga ggcgctggtg atcggcggcg gcatggcgaa cacgttcctg catgccatcg
     1141 gcatcggcat cggccgttcg ctggcggagc cggacctcgg ggccacggcg caacgcatca
     1201 tggatcgcgc gcgcgagaag aactgcgccg tgatcctgcc ggtcgacgcc gtcgtggcgc
     1261 acgagttcaa ggccaacgcg ccgcaccaca cctacggcat cgacgccatt ccggccgacg
     1321 gcatgatcct cgacgtcggc tcgcaatcca tcgagcgcgt caacgccgcc atcaacgagg
     1381 ccgccacgct cgtgtggaac gggcccctcg gcgccttcga gctgacgccg ttcgaccagg
     1441 gcacggtggc ggcggcccgt catgcagcgg agcggacgcg gggcggcaag ctcgtgtcgg
     1501 tggcgggcgg cggcgacacc gtggcggcgc tgaaccacgc cggcgtcgcc gaccagttca
     1561 cctatgtctc gacggccggc ggcgcgtttc tggagtggct cgaaggcaag ccgttgccgg
     1621 gcgtcgccgc cttgaggcag aattgacaac aattgcaacg cttgaattca gggagcatgc
     1681 catgaatctc gaccaactga ccaaggtcgc cgaggcgatg gtaaagcccg gcaagggcat
     1741 tctggcggcc gacgagagct cgggcacgat cgccaagcgc ttcgaagcga tcggcgtcga
     1801 ctcgaccgcc gacaaccgcc gcgattatcg cgagctgctg ttccgctcga gcgacgcgat
     1861 gcgcaaccac atctcgggcg tgatcctcta tgacgagacc ctgcgccaga acgccaagga
     1921 cggcacgccg ctcgtcaagc tgatcgagca ggcgggcgcc atcccgggca tcaaggtcga
     1981 cacgggcgcc aagcccctgc ccgggtgccc cggcgagacc atcacggagg gcctcgacgg
     2041 cctgcgcgaa cgcctcaagg aatactacgg ccttggcgcc cgcttcgcga aatggcgcgc
     2101 ggtcatcgac atcggcgaag gcgtcccgac ctggacggcc gtgaaggcca atgccca
//
LOCUS       DATAIQ010000634         4642 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_33140, whole genome shotgun sequence.
ACCESSION   DATAIQ010000634 DATAIQ010000000
VERSION     DATAIQ010000634.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4642)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4642)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4642
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_33140"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(153..563)
                     /locus_tag="VHN20_10550"
     CDS             complement(153..563)
                     /locus_tag="VHN20_10550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011439026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlgC"
                     /protein_id="HEX2726249.1"
                     /translation="MINATSISISGLNASAARLNASASNVANAGTAGALPTNPAPDAP
                     APYTPIDVVQKSIGEGAASGVSATYVPRTPAYVAAYAPDAPFADERGMVAVPNVDLAQ
                     EAVSQIEAALSFRANVAALKVEMKTTRDLLDVLA"
     gene            complement(657..1094)
                     /locus_tag="VHN20_10555"
     CDS             complement(657..1094)
                     /locus_tag="VHN20_10555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020092054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726250.1"
                     /translation="MIDHSLAAFVARVGKRERICAEDVHELQRSILPEGLASREEADV
                     LIALDRAVADQDPAWADFLVAEVVAFAVWTSRPTGYVDADTARWLSASLGCGTGPSET
                     ARRIAFEVVREAELVDEALLVFVLRSPQRALGRISNSLAELVG"
     gene            1398..1766
                     /locus_tag="VHN20_10560"
     CDS             1398..1766
                     /locus_tag="VHN20_10560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726251.1"
                     /translation="MAAQRVRMFELYEDDNDFSPLARELRGKRVTMQGFMAPHLKVDS
                     DFFILSNTPVETCPFCASEGDWIDSIVFVRMRRKQETTDPGALINVEGLLEIGPETDG
                     ATGFVSKVRLTDAEFRRVGR"
     gene            1763..2488
                     /locus_tag="VHN20_10565"
     CDS             1763..2488
                     /locus_tag="VHN20_10565"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX2726252.1"
                     /translation="MNGGQDVLEAIGLTATYRARTGEHVHALADVSAAFAPGRLTVII
                     GPSGSGKTTLLHCLAGIILATAGSARYGATRLETLREAGRDEWRRRNCGLVFQDFRLI
                     DELDAIGNVLLPARFAQFRLPGALRERARRLLDGFGVPRRSAPAARLSRGERQRVALA
                     RALLLDPPIVLADEPTASLDRGNAEAIAAELQRLARSDGRIVICASHDERVAARADDT
                     LALQAGRKSDPVGARELVAGAAR"
     gene            2485..3696
                     /locus_tag="VHN20_10570"
     CDS             2485..3696
                     /locus_tag="VHN20_10570"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX2726253.1"
                     /translation="MNPWPVIGACLRRYRWTAVTFMLLVAAGVSLAVALVSQERALRT
                     GSTRAADRFDLIVAAPGSQTEALLTAVYLRPGAPKLLAPATTAQLLNERRAAFVAPLA
                     FGDSHGGAPVVGTTAPLLAHLSDGLAEGRVFASRNEAVVGAASPLIVGGTFRPTHGHG
                     AEAEADDAHEHGATLTVVGRMKPTGSPWDRVIAVPVELVWDVHGLPDGHAKGSETIGP
                     PFEAERTPGIPAAVVRPESVAMAYRLRSAYSTTESMAFFPAEALRSLYSVLGDMRRLM
                     SVLALVTQALVLAAITASVLILFRVLTSQFVTLRALGAPRRYLFAVAWGFTAFLVLAG
                     TLAGLAAGYAVSFAVSRWLAHETGVALVPTLGAAEVAIAGGVLATGLILAIVPAWLIQ
                     RRPLAEALADT"
     gene            3763..>4642
                     /locus_tag="VHN20_10575"
     CDS             3763..>4642
                     /locus_tag="VHN20_10575"
                     /inference="COORDINATES: protein motif:HMM:NF013696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEX2726254.1"
                     /translation="MRSLSRRLALAFVLGVSPIAIAVAQDASPKHVETIKRIMDSAAY
                     KKAVETVAAEHDRWVEEVIKLTEIEAPPFKEQKRAQVYADMFKAHGLSDVEIDPEGNV
                     LGLRKGTGGGPVVVVSAHLDTVFPEGTDVKVTRKGTRLYAPGVGDDSTGLATLLQYVR
                     ALEAGGAKTTSDIVFMGTVGEEGLGDLRGVRYFFTKGKYKDNIKAFFSLDGSGLNDVT
                     TGGVGSKRYRVTFKGPGGHSFGAYGIVNPMTAMSQAVVELYKLQVPAKPKTTYSASVT
                     SGGTSVNSIPNEVWMEF"
BASE COUNT          721 a         1603 c         1565 g          753 t
ORIGIN      
        1 gtttcccgcg agccggtcgg gttcgccgac gaaaaatacc cagggcggtt acggcagtga
       61 tgcgtggagg cggcggtact atcgcttcgc agggcgccac tggaacggcg ccttcggccg
      121 ctgcccgact tgaagagcgt cgtctcgcgt gctcaggcga gcacgtcgag caggtccctg
      181 gtcgttttca tctcgacctt cagggccgcg acattggcac ggaagctcaa ggccgcctcg
      241 atctggctga ccgcttcctg cgccaggtcg acgttcggga cagcgaccat gccgcgctcg
      301 tccgcgaagg gcgcgtccgg cgcgtaggcg gcgacataag ccggcgtcct cggaacatag
      361 gtcgccgaaa cgcccgatgc tgcgccttct ccgatgctct tctggacgac atcgatgggc
      421 gtgtaaggcg cgggagcgtc cggggcagga ttcgtaggca gcgccccggc cgtgcccgcg
      481 ttggcgacgt tcgacgcgct cgcgttcagg cgagcggcgc tcgcgttcag tcccgagatc
      541 gagatgctcg tcgcgttgat catgccccga gcctagaaag cccggattag ggaacgaata
      601 atccgatccc taaaattgcg ccgtccgcgg cccctccccc gatcaaggcg agagcgctac
      661 cccacgagtt ccgcgagcga gttcgagatt cgcccgagcg cgcgttgcgg cgagcgcagc
      721 acgaagacga gcagcgcctc gtcgaccagc tcggcctcgc gcaccacctc gaaggcgatg
      781 cgacgcgccg tctcgctcgg tcccgtgccg cagccgagcg aagcgctcag ccaacgcgcc
      841 gtgtcggcgt cgacatagcc ggtcgggcgc gacgtccaca ccgcgaaggc gacgacctcg
      901 gccacgagga aatcggccca cgcggggtcc tggtcggcga cggcacggtc gagagcgatc
      961 agcacgtccg cctcttcgcg cgacgccaaa ccctccggca ggatgctgcg ctgaagctca
     1021 tgaacgtctt cggcgcagat gcgctcgcgc ttgccgaccc gcgccacgaa cgcagcaagt
     1081 gaatggtcga tcatctgctt aacccctccg gcttttgttg tttgccggtc tgtccctgtc
     1141 tgtcctgatc ttcgctgcgc ccaccttgtt ctgagttaat ctccaattct gaatgcgaat
     1201 tcaggttaag ctgcactgac ccgggatggt ttccgagagg ttacctccca tgccggccgg
     1261 cgcggacccg agagacggga cagcctggaa cgtaaaatcg tgttggggat tgggcgtgtg
     1321 atgctatgag gtggccgatg ttgacacggc ggacatggct tctggcggcg ctgggatgcg
     1381 ggatcacaag acccgcgttg gccgcgcaac gcgtgcgcat gttcgagctt tacgaggacg
     1441 ataacgattt ctcgccgctg gcgcgcgagc tgcgcggcaa gcgcgtcacg atgcagggct
     1501 tcatggcccc gcatctgaaa gtcgactcgg acttcttcat cctctcgaac acgcccgtcg
     1561 agacgtgccc gttctgcgcc tccgagggcg actggatcga ctcgatcgta ttcgtgcgca
     1621 tgcgccgcaa gcaggaaacc accgatcccg gggcgctgat caacgtcgag ggccttctgg
     1681 agatcggtcc cgagaccgat ggggcaacag gtttcgtcag caaggtccgc ctgaccgacg
     1741 cggagttcag gagagtgggc cgttgaacgg cgggcaggac gtgctcgaag cgatcggcct
     1801 cacggccacc taccgcgccc gcaccggcga acatgtccac gccctcgccg acgtatcggc
     1861 ggctttcgca ccggggcgcc tcaccgtgat catcggcccg tccggctccg gtaagacgac
     1921 gctgttgcat tgcctcgccg gcatcatcct cgcgacggct ggcagcgcgc gttacggcgc
     1981 aacccggctc gagacgttgc gcgaagccgg ccgcgacgag tggcggcgcc ggaattgcgg
     2041 actcgtcttc caggatttcc ggctgatcga cgagctcgac gccattggca atgtgctgct
     2101 gccggcgcgc tttgcgcaat tccggctgcc gggggcgttg cgcgagcgcg cccgccgcct
     2161 gctggacggc ttcggcgtgc cgcgccggag cgcccctgcc gcgcgcctgt cgcgcggcga
     2221 gcgccagcgc gtcgcccttg cccgggcgct gcttctcgac ccgcccatcg ttctcgccga
     2281 cgagccgacc gcgagtctgg atcgcggcaa tgccgaagcg atcgcggccg agctgcagcg
     2341 cctggcccgg agcgacggcc gcatcgtgat ctgcgccagc cacgacgagc gcgtcgccgc
     2401 gcgcgccgac gacaccctag ccttgcaggc cggccgcaaa tcggatccgg tcggcgcccg
     2461 cgagctcgtc gccggagcgg cgcgatgaat ccctggcccg tgatcggcgc gtgcctgcgg
     2521 cgatatcgct ggacagcggt gaccttcatg ctgctggtcg cggccggcgt cagcctcgcc
     2581 gtcgcgctcg tctcccagga acgcgccttg cgcacgggca gcacgcgggc cgccgaccgg
     2641 ttcgacctga tcgtcgccgc gcccggcagc cagaccgagg cgctgctcac ggcggtttac
     2701 ctgcgccccg gcgcaccgaa gctgctcgcg ccggcgacga ctgcgcaact gctcaacgaa
     2761 cgccgcgccg ccttcgtggc gccgctcgcc ttcggcgaca gccatggcgg cgcgccggtc
     2821 gtcggcacga ccgcgccttt gctcgcgcac ctgtccgacg gcctggccga aggccgggtg
     2881 ttcgcgagcc gcaacgaggc ggtggtcggg gcggcatcgc ctctgatcgt cggcggcacc
     2941 tttcggccga cgcacggcca cggggccgaa gccgaggccg acgatgcgca cgagcatggc
     3001 gcgaccttga cggtggtcgg gcgcatgaag ccgaccggct cgccctggga ccgcgtcatt
     3061 gcggtcccgg tcgagctggt ctgggacgtg cacggcctgc ccgacgggca cgcgaaggga
     3121 agcgagacga tcggcccgcc gttcgaggcg gagcgcacgc caggcattcc ggccgcggtc
     3181 gtgcgcccgg aaagcgtcgc catggcctac cggctgcgta gcgcctattc gaccaccgaa
     3241 tcgatggcgt tctttccggc ggaagcgctg cgcagcctct actccgtgct tggcgacatg
     3301 cgccgcctca tgagcgtgct ggcactcgtg acgcaggcgc tcgtgctcgc cgcgatcacc
     3361 gcgagcgtgc tgatcctgtt ccgcgtgctt acctcgcaat tcgtgacgct gcgtgcgctc
     3421 ggggcgccgc gccgctatct gttcgcagtc gcctggggat tcacggcgtt cctggtcctg
     3481 gccggcaccc tcgcggggct cgcagccggt tacgccgtct ccttcgcggt cagccgctgg
     3541 ctggcgcacg agaccggcgt cgcgctggtg ccgacgctcg gcgccgccga ggtggcgatc
     3601 gccggcggcg tgctcgccac tggcctgatc ctggcgatcg tgccggcctg gctgatccag
     3661 cgccgcccgc ttgccgaagc gctcgccgat acgtaagccg ccctatagcg tgcgatgcag
     3721 cttttgctca cccatgaccc ggaaacctca aggagacaga tgatgcgttc cctctcacgt
     3781 cgcctcgccc tggctttcgt cctcggcgtg tcgccaatcg caattgccgt tgcgcaggac
     3841 gcctctccga agcatgtcga gacgatcaag cgaatcatgg acagcgccgc ctacaagaag
     3901 gcggtcgaga cggtcgccgc cgagcacgac cgctgggtcg aggaggtgat caagctcacc
     3961 gagatcgagg cgccgccgtt caaggagcag aagcgggcgc aggtctatgc cgacatgttc
     4021 aaggcgcacg gcctcagcga cgtcgagatc gatcccgagg gcaacgtgct cggcctgcgc
     4081 aagggcactg gcggcggtcc cgtcgtggtc gtgtcggcgc atctcgacac ggtgttcccg
     4141 gaaggcaccg acgtgaaggt gacgcgcaag ggcacgcgcc tttacgcgcc cggcgtcggc
     4201 gacgacagca ccggcctagc gacgctgctg caatatgtgc gtgcgctcga agcgggcggg
     4261 gccaagacca cgagcgacat cgtgttcatg ggcactgtcg gcgaggaagg gctcggggac
     4321 ctgcgcggcg tgcgctactt cttcaccaag ggcaaataca aggacaacat caaggcgttc
     4381 ttctcgctag acggcagcgg cctcaacgac gtgacgaccg gcggcgtcgg ttccaagcgc
     4441 taccgcgtga cgttcaaagg ccccggcggg cactcgttcg gcgcctacgg catcgtcaac
     4501 ccgatgaccg ccatgtcgca ggcggtcgtc gagctctaca agctgcaggt gccggccaag
     4561 cccaagacca cgtacagcgc cagcgtgacg agcggcggca cctccgtgaa ctcgatcccg
     4621 aacgaagtct ggatggagtt cg
//
LOCUS       DATAIQ010000635         1732 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_337723, whole genome shotgun sequence.
ACCESSION   DATAIQ010000635 DATAIQ010000000
VERSION     DATAIQ010000635.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1732)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1732)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1732
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_337723"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1236
                     /locus_tag="VHN20_10580"
     CDS             <1..1236
                     /locus_tag="VHN20_10580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009489495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005216 - monoatomic ion channel activity
                     [Evidence IEA];
                     GO_function: GO:0030551 - cyclic nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-gated ion channel"
                     /protein_id="HEX2726255.1"
                     /translation="RGSGARGRMTEAAVRGTQAQSLRRRVYELLEPGSHDWAARAVDW
                     ALIGLVLANVTAVVFESLPQVADRFGLMFVVIEIVSIVIFTVEYVLRLWSAPEHAPLC
                     DLPPWRARLQFALQPQSIIDLLAIAPVYAAFFMSGNWRAFLVVRLFRFFKLARYSPGL
                     ASLVEAVYTERRALLASGVILMGTVLIAASLMHLAEHAAQPDKFGTIPDAMYWAIITL
                     ATVGYGDAVPITALGRLIASLTAVAGLIMLALPVGIIASAFAREIHRRDFVVTWSMVA
                     RVPLFADLTADELSDIMRFLRSQTCEADEIVMRRGEPADAMYFIAAGEVEIELPDQRV
                     VLGPGNFFGEIAVLRKSERTATVRARKHLKLLVLDAADLQHLMDRSPRMAQRIREVAE
                     KRVGPEALSGRSDVGGSGQ"
     gene            complement(1269..1709)
                     /locus_tag="VHN20_10585"
     CDS             complement(1269..1709)
                     /locus_tag="VHN20_10585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011085839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HEX2726256.1"
                     /translation="MTGGCQCGAVRYALYAAPTEASICHCRMCQKALGNYFAPFTGVP
                     LGDFAWTRGEPGIFRSSELVERGFCRDCGTPLTFRYTAKDRISVSIGSLDEPQRIVVE
                     MQYGIESRLPAFATLHTLPGETTEASTPAEWLPKLASRQHPDRD"
BASE COUNT          255 a          587 c          586 g          304 t
ORIGIN      
        1 cgtggaagcg gcgctcgcgg ccgcatgacc gaagcggccg taaggggaac gcaagcgcag
       61 tccctgcggc gccgcgtcta cgagcttctc gagcccggct cccatgattg ggcggctcgc
      121 gccgtcgatt gggcgctgat cggccttgtg ctggccaacg tcacggcagt cgtgttcgag
      181 agccttccgc aggtcgccga ccgctttggc ctgatgttcg tcgtcatcga gattgtctcg
      241 atcgtcattt tcaccgtgga atacgtgctg cgcctgtgga gcgcgcccga acacgcgccc
      301 ctctgcgatc tgccgccctg gagagcgcgg ctgcagttcg cgctgcagcc gcaatcgatc
      361 atcgaccttc tcgccatcgc gccggtttat gcagccttct tcatgagcgg caactggcgt
      421 gcgtttctcg tcgtccgcct gtttcgcttc ttcaagctgg cccgctattc gcccggcctc
      481 gcgagcctcg tcgaggcggt ctacaccgag cgccgcgcgc tgctggcaag cggggtgatc
      541 ctgatgggca cggtgctgat cgcggcgtcg ctgatgcacc tcgccgaaca cgcggcccag
      601 cccgacaagt tcggcaccat cccggacgcg atgtattggg cgatcatcac cctcgccacc
      661 gtcggctacg gcgacgccgt gccgatcacg gcgttgggac ggctgatcgc gagcctcacg
      721 gcggtcgccg ggctgatcat gctggcattg ccggtcggca tcatcgccag cgccttcgcg
      781 cgcgaaatcc accgccgcga cttcgtggtg acctggagca tggtggcccg ggtgcctctg
      841 ttcgccgatc ttactgccga cgagctcagc gacatcatgc gcttcctgcg ctcgcagacc
      901 tgcgaggcgg acgagatcgt catgcgccgc ggcgagccgg ccgacgccat gtatttcatc
      961 gccgccggcg aggtcgagat cgagttgccg gaccaacgcg tcgtgctcgg gcccggcaat
     1021 ttcttcggcg agatcgccgt gctgcgcaaa tccgagcgca ccgccacggt gcgcgcccgc
     1081 aagcacctga agttgctcgt gctcgacgcc gccgacctgc agcatttgat ggaccgcagc
     1141 ccgcgcatgg cgcagcgcat ccgcgaggtg gcggaaaagc gcgtcgggcc ggaagcgctc
     1201 agcggcagga gcgatgtcgg cggcagtggg cagtagtcat tcacatcggt gttgccaccg
     1261 actgccgatc agtcgcgatc cgggtgctgg cgcgaggcga gcttcggcag ccactcggcc
     1321 ggcgtgctcg cctcggtcgt ctcgcccggc agggtgtgca gcgtggcgaa ggccggcagc
     1381 cggctctcga tgccgtattg catctcgacc acgatgcgct gcggctcgtc gaggctgccg
     1441 atcgacaccg agatgcggtc cttggcggtg tagcggaacg tcagcggcgt gccgcagtcg
     1501 cggcagaagc cgcgctcgac cagctcggag ctgcggaata tgccgggctc gccgcgcgtc
     1561 cacgcaaagt cgccaagcgg cacgccggtg aacggcgcaa agtaattgcc gagcgccttc
     1621 tgacacatgc ggcaatggca gatgctggct tcggtcggcg cggcatagag cgcgtagcgc
     1681 acggcgccgc actggcagcc gccggtcatt tccgggtgcc gctgtgaagg ca
//
LOCUS       DATAIQ010000636         3290 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_33190, whole genome shotgun sequence.
ACCESSION   DATAIQ010000636 DATAIQ010000000
VERSION     DATAIQ010000636.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3290)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3290)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3290
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_33190"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..219
                     /locus_tag="VHN20_10590"
     CDS             <1..219
                     /locus_tag="VHN20_10590"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate binding protein"
                     /protein_id="HEX2726257.1"
                     /translation="EAGGLVSYGPDQYATYQWLARYAARLLRGERAGDLPVQQPTTFE
                     LIINLKTAQALGVTIPPTLLTRADMVIE"
     gene            349..642
                     /locus_tag="VHN20_10595"
     CDS             349..642
                     /locus_tag="VHN20_10595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011970191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2934 domain-containing protein"
                     /protein_id="HEX2726258.1"
                     /translation="MDHEEHDRVRRRAYELWEEEGRSGDPHDHWRRAEQEMRGSSAAP
                     ADTAQDSAPGRSAEAQKFADQVEVATKSRNARSKQTGRAGRTGTKKKAPESGP"
     gene            complement(695..2941)
                     /locus_tag="VHN20_10600"
     CDS             complement(695..2941)
                     /locus_tag="VHN20_10600"
                     /inference="COORDINATES: protein motif:HMM:NF044287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726259.1"
                     /translation="MADDALKSITPTLQAVDKADLDAVRGFLPGKLLGRTAAFLALGV
                     LVLAQMGALDLALRHLFGISFDPAGPWAKFGVLAALPALVVVVQLALEARARAQARRI
                     RQRTVATAGVRERHFRVGPYGSADQAAFDRADKVHETVLGWIMAPDLRVPLYLSGDSG
                     TGKSSLLAAYVVPKLRQAGWVIVQARAHDDPQAQLRDALVALSPSRPRTPARPEDMPL
                     RAQLEAAARHVRGPGRLLVLLDQFEEFVILHAPAARESFSALLRDLAAQSIPGLVLLL
                     VVRSEYEAHLQELGLPPLRLGENLQKVPRFTLGAARRFLDEGGIGLAPETVDGLVSGA
                     ARLDDTPGLVRPITINLVGYVLAEGARIRPEAIDAGRLILRYVQDVIQHPDVRHLMPQ
                     LLPQLITEAGTKAPATIADLASRSGLSVAEVRACLLTLAQHALARPLDERQETWELSH
                     DFVARLVGQALGRLHANVVGRVLSYTAPILLLLMLVGVAGLGAWLITAEDRARANLQH
                     AGLHLMEDGAGGIALLATSVKPERVPLAVSGTRHFAGRITELVLSELSGWLLQCDDCF
                     PLVRRVSLISLESPDLAQLAKLESLKTLNLVGGSAPDVTSLRALANLEELGLVNVQLS
                     DLATIADLKALRYLALSKNPVSDLTPLRGLNALAVLRLNETQVSDLGPLAELFALEDL
                     SLAMTAVSNITPLRRLTALKRLDLTSTNVRDLTPLQQDRITIVHSLVRGELQLPPNAA
                     HWDLQGPE"
BASE COUNT          583 a         1096 c         1150 g          461 t
ORIGIN      
        1 gaggcgggcg gcctcgtcag ctatggcccc gaccagtacg cgacgtatca gtggctcgcc
       61 cgctacgctg cgaggttgct gcggggagag cgagccgggg accttcccgt tcagcagcca
      121 acgacattcg agctcatcat caacctcaag acggctcagg cgctcggcgt gacgatcccg
      181 ccgacgctcc tcacccgggc cgacatggtg atcgaatgag gttcgccgga acgcattgag
      241 gctggcaccc gcgcacgggc cgcacgcccg agcgcgcggg cgcgccggac aggcggaaca
      301 gccgaggcgc gacggcagtt tatggagcgt atcggcaggg acgacggcat ggaccacgaa
      361 gagcacgaca gggtgcgcag gcgcgcctat gagctgtggg aagaggaagg gcgctccgga
      421 gatccgcatg accattggcg ccgggcggag caggagatgc ggggcagctc ggcggcgccg
      481 gccgacaccg ctcaggacag cgcgccgggt cgctccgccg aagcgcaaaa attcgccgac
      541 caggtcgagg tggcgacgaa gtcccgcaac gcccgctcta agcagaccgg ccgcgccggc
      601 cgcaccggca caaagaagaa ggcgccggag agcgggcctt aagctcggtt gagagcgcgg
      661 accgcgttgc tgctgctacc ttccggcatc gctatcactc cggcccttgc aaatcccaat
      721 gcgcggcgtt cgggggaagc tggagctcgc cgcgcaccag cgaatggacg atggtgatcc
      781 tgtcctgctg caagggcgtg aggtccctca cgttcgtcga cgtgagatcc agtcgcttca
      841 gggccgtcaa ccgtcgcagg ggcgtgatgt tcgaaaccgc ggtcatggcc aacgacaggt
      901 cctccagcgc aaagagctcg gccagaggcc cgagatcgga cacctgggtc tcgttcagcc
      961 gcaggacggc cagagcgttc aatccgcgca ggggcgtgag atcactgaca ggattctttg
     1021 agagagcgag ataacgcagc gccttgagat cggcgatagt cgccaagtct gaaagttgta
     1081 cattgaccag gcccagttct tccaggttgg cgagtgcacg gagagacgtg acgtccggcg
     1141 ctgaaccgcc cacaagattc aaggtcttta acgattcgag cttcgccaat tgcgcaaggt
     1201 caggcgactc cagagatatc agagacaccc ggcgaaccag tggaaagcag tcgtcacatt
     1261 ggagcagcca gccggacagc tcggacagga ccagctcggt gatccgcccg gcgaaatgcc
     1321 gtgtgccgct cacggccagc gggacccttt cgggttttac cgacgtggcg agcaacgcga
     1381 tcccgcccgc tccgtcttcc atgaggtgca gcccagcgtg ctgcaggttt gcgcgggcgc
     1441 ggtcttcggc cgtgatgagc caagcgccga gacccgcgac gccgaccagc atgagcagca
     1501 ggaggatcgg ggcggtgtag ctcagcacac gccccaccac gtttgcgtgc aggcggccga
     1561 gcgcctggcc gaccagccgg gccacgaagt cgtgcgacag ctcccaggtt tcctgccgct
     1621 cgtcgagcgg gcgggcgagg gcgtgttgag ccagggtgag aaggcaggcg cggacctccg
     1681 cgacgctcag cccgctgcgc gatgccaggt cggcgatggt cgccggcgct ttcgtgccgg
     1741 cttcggtgat caactgcggc aggagttgcg gcatcaggtg gcgcacgtcc ggatgctgga
     1801 tgacgtcctg cacgtagcga aggatcaggc ggcccgcgtc gatcgcctcc ggccggatgc
     1861 gcgctccctc ggccagaacg tagccgacga gattgatcgt gatcgggcgc accaggcccg
     1921 gcgtgtcgtc cagccgggcg gctccgctga cgagcccatc gaccgtctcc ggcgccaggc
     1981 cgatgccgcc ctcgtcgaga aagcgccgcg cggcgccgag cgtgaagcgc ggaaccttct
     2041 ggaggttctc gccgaggcgc aatggcggca ggccgagctc ctgcagatgc gcttcgtact
     2101 cgctgcgcac gacgagcagc aggacgaggc cgggaatcga ttgcgcggca agatcgcgca
     2161 ggagcgccga gaagctctcg cgcgcggcag gcgcgtgcag gatgacgaac tcctcgaact
     2221 ggtcgagcag caccagcagc cggccagggc cgcgcacgtg gcgcgccgcc gcctcgagtt
     2281 gcgcgcgcaa cggcatgtct tcggggcgcg cgggcgtgcg cgggcgcgat gggctcagcg
     2341 ccaccagcgc gtcgcgcaac tgcgcctgcg ggtcgtcgtg ggcgcgcgcc tgcacgatca
     2401 cccatcccgc ctgtcgcagc ttcggaacga cataggcggc gagaagcgag cttttcccgg
     2461 tgcccgagtc gccgctcaga tagagcggca cgcgcaggtc gggtgccatg atccacccga
     2521 gcacggtctc atgcaccttg tcggcgcggt cgaacgccgc ctgatcggcg ctgccgtacg
     2581 gcccgacccg gaagtggcgt tccctgacgc cggccgtcgc cacggtgcgc tggcggatgc
     2641 ggcgcgcctg cgcccgcgcc cgcgcctcga gcgcgagctg cacgacgacg accagcgccg
     2701 gcagcgccgc gagaacgccg aacttggccc aaggccccgc cggatcgaag ctgatcccga
     2761 acagatgccg caaggcgagg tcgagcgcgc ccatttgcgc gagaacgagg acgcccagcg
     2821 ccaggaatgc cgccgtccgc ccgagcagct tgccgggcag gaagccgcgg actgcatcga
     2881 ggtcggcctt gtcgacggcc tgcaaagtcg gcgtgatcga cttcagcgcg tcgtccgcca
     2941 cggccagtct ccggcttcgt gcagatcacc ccgagtatag agccaagttc ttcggacggg
     3001 tatgtggagg ggttcacaat cgcgacttga gcggttggcg gagggcggca atcggaagac
     3061 cggctcctcg gggccgccgg gtcgccgcgc ttgcccctgc gaacggtccg ccgaacctgc
     3121 cgcgcgacga tcttgcgtcg ctgggctcgc cgcctggcgc cagccaaccg gtgaaaaaaa
     3181 gcccggcaca cgagccgggc tttcctggtt attccgcgag cactgccacg agcttcagaa
     3241 tggcggcgag caggttgaag accgccgaca acaccgcaat cacgtctacc
//
LOCUS       DATAIQ010000637         2720 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_153954, whole genome shotgun sequence.
ACCESSION   DATAIQ010000637 DATAIQ010000000
VERSION     DATAIQ010000637.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2720)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2720)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2720
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_153954"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..666
                     /locus_tag="VHN20_10605"
     CDS             <1..666
                     /locus_tag="VHN20_10605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015928184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HEX2726260.1"
                     /translation="RVARFLKSTSRFGAELDSLSDFVNFGVAPALVLYSFVLHDLRAL
                     GWIVALVFAIAAGLRLARFNVMLDDPNRPEWKKNFFVGMAAPAGAITALLPIYLWALG
                     LPVQNLTGAWFSLFYVLLIAFLMVSTIPTFSGKTMGKRIPRDWVLPLFVVTVAFFGLL
                     VNFPFEVLAAGTIVYLGAIPIGAARYRQLDRAEAAPTPAEDPIPAIPPEPGEEQQPGR
                     PLH"
     gene            913..1578
                     /locus_tag="VHN20_10610"
     CDS             913..1578
                     /locus_tag="VHN20_10610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009489279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047429 - nucleoside triphosphate
                     diphosphatase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Maf-like protein"
                     /protein_id="HEX2726261.1"
                     /translation="MLEKFVAAASDTGTPRSRPKLVLASGSPRRLALLQQTGLDPDAL
                     LPADVDETPARSESPRELARRLARGKAEVARRAARNREDLKDSYIVAADTVVTAGRRI
                     LPKAEVIEEAAACLRLLSGRAHRVYTAVCVITPKDAVRERLVETRVRFKRLSREETES
                     YLASGEWRGKAGGYAIQGLAGSFVVKLVGSYSNVVGLPVYETVALLDGAGFPVRLGWL
                     NAA"
     gene            1625..1837
                     /gene="yacG"
                     /locus_tag="VHN20_10615"
     CDS             1625..1837
                     /gene="yacG"
                     /locus_tag="VHN20_10615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009489283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase inhibitor YacG"
                     /protein_id="HEX2726262.1"
                     /translation="MADSDDKPARLGACPICGKPAVEKYRPFCSPRCADADLQRWFTG
                     RHAIPAVEDEDAPDEPPEDAGQPRRG"
     gene            1909..1984
                     /locus_tag="VHN20_10620"
     tRNA            1909..1984
                     /locus_tag="VHN20_10620"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1942..1944,aa:Phe,seq:gaa)
     gene            complement(2141..>2720)
                     /locus_tag="VHN20_10625"
     CDS             complement(2141..>2720)
                     /locus_tag="VHN20_10625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010915929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="mandelate racemase/muconate lactonizing enzyme
                     family protein"
                     /protein_id="HEX2726263.1"
                     /translation="VGPDVEIMLDLSGGLTTDETIRLCRRFEELDITWIEEPADPFDI
                     GALKQITEHTAIPVAVGERIYTRHGFRKIFEPHAAHIVQPDVGNTGGIMEVKKIAAMA
                     EAYNMRVAPHNCASALSTAASLQIAANIPNFMTQEIYPYFPERPGYVQVLADSPEDQI
                     KDGILPVPTAAGLGVALAAERLAPFCWARCAA"
BASE COUNT          397 a          946 c          924 g          453 t
ORIGIN      
        1 cgcgtcgcgc gcttcctgaa gagcacctcg cgcttcggcg ccgagctcga ttccctgtcc
       61 gatttcgtca atttcggcgt cgccccggcg ctggtcctct acagcttcgt cctgcacgac
      121 ctgcgcgccc tcggctggat cgtggcgctc gtcttcgcca tcgccgccgg gctgcggctg
      181 gcgcggttca acgtcatgct cgacgacccc aaccggcccg aatggaagaa gaacttcttc
      241 gtcggcatgg cggcgccggc gggcgccatc acggcgcttc tgccgatcta tctctgggcg
      301 ctcggcctgc cggtccagaa cctcaccggc gcctggttct cgctgttcta cgtcctgctg
      361 atcgcgttcc tgatggtttc caccatcccg accttctccg gcaagaccat gggcaagcgc
      421 atcccgcgcg actgggtcct gccgctgttc gtggtcacgg tcgccttctt cggcctgctg
      481 gtgaactttc cgttcgaggt gctggccgcg ggaacgatcg tctatctggg ggcgatcccg
      541 attggcgccg cgcgctaccg gcagctcgac cgcgccgagg cggccccgac gccggccgag
      601 gacccgattc ccgccatccc cccggaaccg ggcgaggagc agcagccggg caggccgctt
      661 cactagcagg caagcaaggt taacgatcgg cggcccgtgg ctccggccgc gcgggccgct
      721 cttaaccgtc cagcgcgccg caggttcaca aatccgggcc tttcgcgtag gtattgccgc
      781 ctgcgcgaac gaggaattgc cgggttgcgc ggcgtcgacg gacgcccggc gaactcggca
      841 agtccgcgtc accctctcat ttcaggtcaa gccttcggct ccggctgctg gaacaagaca
      901 ggtcaagctt cgatgttgga aaagttcgtg gcggcggcga gcgatacggg gaccccgcgg
      961 tcgcgcccca agctggtgct ggcgtcggga tcgccgcggc ggctcgccct gttgcagcag
     1021 accggcctcg accccgacgc gctgctgccg gccgacgtcg acgagacgcc ggcgcgctcg
     1081 gaatcgccgc gcgagctggc gcggcgcctc gcccgcggca aggccgaggt ggcgcgccgc
     1141 gccgcccgca accgcgagga cctcaaggat tcctacatcg tcgccgccga cacggtcgtg
     1201 accgcgggcc ggcgcatcct gcccaaggcc gaggtgatcg aggaggctgc ggcgtgcctg
     1261 cgcctgctct cgggccgcgc ccaccgcgtc tacacggcgg tgtgcgtgat cacgccgaag
     1321 gacgcggtgc gcgagcgcct cgtcgagacg cgcgtgcgct tcaagcgcct gtcgcgcgag
     1381 gagacggaga gctatctcgc ctcgggcgag tggcgcggca aggccggcgg ctacgccatc
     1441 cagggcctcg ccggcagctt cgtggtcaag ctcgtcggct cctactcgaa cgtggtcgga
     1501 ctgcccgtct acgagaccgt cgcgctcctc gacggcgccg gcttcccggt gcggctcggc
     1561 tggctcaacg ccgcctgagg gcgagcggct ggatcgccgc gcggacggcg ctcggatggc
     1621 aaggatggcg gacagcgacg acaagccggc gcgcctcggc gcgtgcccga tctgcggcaa
     1681 gccggcggtg gaaaaatacc ggccgttctg ctccccgcgc tgcgccgacg ccgacctgca
     1741 gcgctggttc accggccgcc acgccattcc cgccgtcgag gacgaggacg ctcccgacga
     1801 gccgcccgaa gacgctggac agccccgccg cggctgacta taagcgccgc tccacgcatg
     1861 atccggcgaa gtggacaccg cttcggcgaa aaagatcatg cgcggcatgc ccaggtagct
     1921 cagttggtag agcacgtgac tgaaaatcac ggtgtcggtg gttcgattcc gcccctgggc
     1981 accataacgc tcgtaagctg ttgtcgatgc cgaaggcgat agccagagca gcttccccga
     2041 agcaattttt ctaaaacgca ctgtccctca cgcggtcccg atccaggtcc agcgtctggc
     2101 ctgctggatc gtttccgcgc acgccgaacg ccggcgccgg tcaggctgcg caccgcgccc
     2161 agcagaatgg cgccagccgt tccgcggcga gcgcgacgcc gaggccggcc gctgtgggca
     2221 cgggcaggat gccgtccttg atctggtcct cgggcgaatc cgccagcacc tggacgtagc
     2281 cgggccgctc cgggaaatag ggatagatct cctgcgtcat gaagttgggg atgtttgccg
     2341 cgatctggag cgaggcggcg gtcgacaggg cgcttgcgca gttatggggt gcgacgcgca
     2401 tgttgtaggc ctcggccatc gcggcgattt tcttcacctc catgatgcct ccggtattgc
     2461 cgacatccgg ctggacgatg tgggcggcgt gcggctcgaa gatcttgcgg aagccgtggc
     2521 gcgtgtagat gcgctcgccg accgcgaccg ggatcgcggt gtgctccgtg atctgtttga
     2581 gggcgccgat atcgaacggg tcggcaggct cttcgatcca ggtgatgtcg agctcctcga
     2641 agcgccggca aaggcggatc gtctcgtcgg tcgtgagacc gcctgacagg tcgagcatga
     2701 tctcgacgtc cggcccgacc
//
LOCUS       DATAIQ010000638         1987 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_61194, whole genome shotgun sequence.
ACCESSION   DATAIQ010000638 DATAIQ010000000
VERSION     DATAIQ010000638.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1987)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1987)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1987
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_61194"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..927)
                     /locus_tag="VHN20_10630"
     CDS             complement(<1..927)
                     /locus_tag="VHN20_10630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012334638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HEX2726264.1"
                     /translation="MTRLFVVLSLVLAAVTGAAAQERTVNVYNWSDYIDPKVLEDFTK
                     ETGIKVVYDTYDNNEIVETKLLAGRSGYDVVVPSGPFLQRLITAGVFQKLDKGKLPNL
                     KNMWPDVARRLQVFDPGNQYAVNYMWGTTGIGVNVRKVQERLGQAQMNTWDIVMKPEL
                     VSKLKDCGIHMLDAPEDIFPGILNYLGLNPDSKRNEDLTRAGDALFRIRGNVQKFHSS
                     EYINALANGDICMAVGYSGDVLQARKRAEEAKNNVDVAYVIPREGALMWFDSLAIPAD
                     ARNVAEAHAFIDYLMRPAVAAANTNFVAYASGN"
     gene            complement(1244..>1987)
                     /locus_tag="VHN20_10635"
     CDS             complement(1244..>1987)
                     /locus_tag="VHN20_10635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX2726265.1"
                     /translation="QPPNFRLTEEALARAFSPKTRAVLFNNPLNPAATVFSAEDLSLL
                     AAFCARFDAVAICDEVWEHVVFDGRRHQPLMALPGMRERTVKIGSAGKIFNLTGWKVG
                     FVCAEPRLMKVLAKAHQFLTFTTPPNLQAAVAYGLAKDDSYFEGLRADLQRSRDRFTA
                     GLAGLGFAVIASHGTYFVNIDIAPLGETDDVAFCQRLVVEHGVAAIPVSAFYAEAAVK
                     NVVRFCFAKRDTTLDAALERLAGLVRRAA"
BASE COUNT          347 a          622 c          673 g          345 t
ORIGIN      
        1 gttgccggat gcataggcga cgaaattggt gttcgccgcc gccaccgcgg gccgcatgag
       61 atagtcgatg aaggcgtgcg cctcggcgac gttcctggcg tcggccggga tcgcgagcga
      121 gtcgaaccac atcagcgcgc cctcgcgcgg gatcacgtag gcaacgtcga cgttgttctt
      181 ggcttcctcg gcgcgcttgc gcgcctgcag cacgtcgcct gaatagccga ccgccatgca
      241 gatgtcgccg ttggcgagcg cgttgatgta ttccgacgag tggaatttct ggacgttgcc
      301 gcggatgcgg aacagcgcgt cgccggcccg cgtcaggtcc tcgttgcgct tcgaatccgg
      361 gttgagaccg agataattga ggatgcccgg gaaaatatcc tcgggcgcat cgagcatgtg
      421 gatgccgcaa tccttgagct tcgagacgag ctcgggcttc atcacgatgt cccaggtgtt
      481 catctgcgcc tggccgaggc gctcctggac tttcctgaca ttcacgccga tgccggtcgt
      541 gccccacatg tagttgacgg catattggtt gcccgggtcg aagacctgca ggcgccgcgc
      601 cacgtccggc cacatgttct tgaggttcgg cagcttgccc ttgtcgagct tctggaagac
      661 gcccgccgtg atcaggcgtt gcaggaaggg acccgaaggc acgacgacgt cgtagccgga
      721 acgcccggcg agaagcttgg tctcgacgat ctcgttgttg tcgtaggtgt cgtagacgac
      781 cttgatgccg gtctccttgg tgaagtcctc cagcactttc ggatcgatat agtccgacca
      841 gttgtagacg ttgacggtgc gctcctgcgc ggcggcgccc gtcacggcgg ctaagacaag
      901 cgacaacacg acgaacaaac gggtcatttt ctggctggca ctcctcttaa gagcctctcg
      961 ggcgggtcct ccagggcggc taagctagag cattttccgg tgaagcggac ccggtccgcc
     1021 gcagaaaatg cgccttgccg aacttagagc cgtttccgcc cgagtggaaa cggctctaag
     1081 gacgcgaaac cgtcggcaca agagaaagca tgcaaggacg tcagcaaggg gcccgtggca
     1141 ccgcccaaaa agcgatgcag ggtaaatggt ttgagaatgc gaggggccaa cccggcgcca
     1201 accgggacgg gcgcccgcgg cgatcggccc cgcccccgtg ggctcacgct gcccgcctga
     1261 ccaggccggc caggcgctcg agggcggcgt cgagcgtcgt gtcgcgcttg gcgaagcaga
     1321 agcgcacgac gttcttcacg gccgcctccg catagaacgc gctgaccggg atggcggcga
     1381 ccccgtgctc gaccaccagg cgctggcaga acgccacgtc gtcggtctcg ccgagcggcg
     1441 cgatgtcgat gttgacgaaa taggtgccgt ggctggcgat gaccgcgaag ccgagccctg
     1501 cgagccccgc cgtgaagcgg tcgcggctac gctgcaggtc ggcgcgcagc ccttcgaagt
     1561 agctgtcgtc cttggcgagg ccgtaggcca cggccgcctg caggttcggc ggcgtcgtga
     1621 aggtgaggaa ctggtgcgcc ttggccagga ccttcatcag ccgcggctcg gcgcagacga
     1681 agccgacctt ccagccggtc aggttgaaga tcttgccggc cgagccgatc ttgaccgtgc
     1741 gctcgcgcat gccggggagt gccatgagcg gctggtggcg gcgcccgtcg aatacgacgt
     1801 gctcccagac ctcgtcgcag atcgcgaccg cgtcgaatcg cgcgcagaag gccgcgagca
     1861 gcgacaggtc ctcggccgaa aaaaccgtgg ccgccgggtt caatggattg ttgaacagca
     1921 ccgccctggt tttcggcgag aaggcgcggg ccagcgcctc ttccgtgagg cggaaattcg
     1981 gcggctg
//
LOCUS       DATAIQ010000639         4343 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_199825, whole genome shotgun sequence.
ACCESSION   DATAIQ010000639 DATAIQ010000000
VERSION     DATAIQ010000639.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4343)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4343)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4343
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_199825"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1148
                     /locus_tag="VHN20_10640"
     CDS             <1..1148
                     /locus_tag="VHN20_10640"
                     /EC_number="2.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019902991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="acetyl-CoA C-acetyltransferase"
                     /protein_id="HEX2726266.1"
                     /translation="SLHEVTSLRLAETALRALKERNELDTGLVDDVILGCVDPVGEAG
                     GDIARAAALVADYGNHVPGVQINRFCASGLDAVNFAAAQVMAGQHDMVVGGGVESMSR
                     IGMGASGGAWPVDPAIAIKSYFMPQGISADLIATKYGFSRDDCDAYAVESQKRAARAW
                     KEGRFAESVVPVKDVNGIGLLAKDEHMRPSTDMQSLGQLKPSFVQMGEMGGFDAVAVA
                     AYPELEAVNHVHHAGNSSGIVDGAAAVLIGSKEAGEAAGLKPRARIRAFANIGSEPAI
                     MLTGPVDVTDKVLKRAGMTIDDIDLVEINEAFASVVLRYCQAFDLHPEIVNVNGGAIA
                     MGHPLGATGAMILGTVLDELERTDEVTALVTLCIGAGMGTATIIERV"
     gene            1199..1687
                     /locus_tag="VHN20_10645"
     CDS             1199..1687
                     /locus_tag="VHN20_10645"
                     /inference="COORDINATES: protein motif:HMM:NF021361.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2059 domain-containing protein"
                     /protein_id="HEX2726267.1"
                     /translation="MRPVVRALFVVVCIAAGGGARADDEADRLQLARELIILNQMLKN
                     LDAMVPTMMNAMKPIITRGDAKVEKDYDAIMKLMLNEFEPFKAQMLDDFERVAARAYT
                     KGELEEIVAFSKSPTGQKMARLAPTLAQAGMAIGQSYGEKVAAQLAEKMKAELRKRGH
                     NI"
     gene            1717..3921
                     /locus_tag="VHN20_10650"
     CDS             1717..3921
                     /locus_tag="VHN20_10650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019902988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /protein_id="HEX2726268.1"
                     /translation="MNLQNFRFETDADGIALATWDMPGRSMNVITVEVMDELSQIIDK
                     VAGDAAIKGCVITSGKDAFSGGADLTMLQGLGALHDKLAKEKGEEAAIQVFFDESRRL
                     SLLYRRLETSGKPFAAAVHGVCLGGAFELALACHYRVVSDADATRVGLPEIKVGLFPG
                     AGGTQRVARLMQTGDALQMLFKGEQLRALMARNMGLVHEVAPRDAVVDKAKAWIKGGG
                     SAVAPWDQEKFRAPSGKVYSPGGMMIWPPANAIYRRETHDNYPAAKAILQAVYEGLQL
                     PMDLALRVESRYFAKILRSKEAAAMIRTLFVSMQELNRGARRPHGIPAAKLTKVGVLG
                     AGFMGAGIAYVTANAGIDVVLIDQSVEAAEKGKAHSHKLVTDQIMKGRAKTADRDALL
                     ARITPSADYGDLKGCDLIVEAVFEDPKVKAEAIAKAEAVIGPDATFASNTSTLPISGL
                     AKGAKRPDQFIGIHFFSPVEKMMLVEIIMGKQTGDKALAVALDYVRAIKKTPIVVNDS
                     RGFVANRCVTAYLLEGHLMLTEGVPPPMIENAGRMAGMPVGPLSLNDEVAVDLALKIL
                     KATKVQVGPQAINPAQEELLVRMVEKEGRFGRKNKKGFYDYPEGGKKRLWPGLTDLQP
                     THLDPDTIDFQELKDRLLVTQALEAARTVEEGVITDPREADVGSILGFGFAPFTGGAL
                     SYIDFMGAKAFVELARELQSRHGDRFAPNKLLLDMAASGGTFYGAARSRKAA"
     gene            complement(3998..4252)
                     /locus_tag="VHN20_10655"
     CDS             complement(3998..4252)
                     /locus_tag="VHN20_10655"
                     /inference="COORDINATES: protein motif:HMM:NF018294.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1127 domain-containing protein"
                     /protein_id="HEX2726269.1"
                     /translation="MSSLLGHAAPFQRHHGLVSIVQHARACLAAGLRYAAALARAIET
                     EAAHRGQLRASGELDNHLLRDIGVSREDVARVCGKKLPSE"
BASE COUNT          768 a         1407 c         1463 g          705 t
ORIGIN      
        1 gctcgctgca cgaggtcacc tcgctgcggc tcgccgagac ggctttgcgc gctctcaagg
       61 agcgcaacga gctcgacacc gggctcgtcg acgacgtaat cctcggttgc gtcgatccgg
      121 tcggcgaggc cggcggcgac atcgccaggg ccgccgccct ggtcgccgat tacggcaacc
      181 acgtgcccgg cgtgcagatc aaccgcttct gcgcgtccgg gctcgacgcg gtcaacttcg
      241 ccgccgcgca ggtgatggcg ggccagcacg acatggtcgt cggcggcggc gtcgaatcga
      301 tgagccgcat cggcatgggc gcctcgggcg gcgcctggcc ggtggatccg gccatcgcca
      361 tcaagtcgta tttcatgccg cagggcattt ccgctgatct gatcgccacg aaatacggct
      421 tcagccgcga cgattgcgac gcctatgcgg tcgagagcca gaagcgcgcc gcgcgcgcct
      481 ggaaggaagg ccgcttcgcc gagtccgtgg tgccggtgaa ggacgtcaac ggcatcggcc
      541 tgctcgccaa ggacgagcat atgcgcccgt cgaccgacat gcagtcgctc ggccagctca
      601 agccgtcctt cgtgcagatg ggcgagatgg gcggcttcga tgcggtcgcc gtggccgcct
      661 atcccgagct ggaagcggtc aaccacgtcc accacgctgg caactcatcg gggatcgtcg
      721 atggagcggc ggcggtcctg attggctcga aagaggcggg cgaggccgcc ggcctcaagc
      781 cgcgtgcccg catccgggcg tttgcgaata tcggctccga gcccgccatc atgctcaccg
      841 gtcccgtcga tgtgaccgac aaggtcttga agcgcgccgg catgaccatc gacgacatcg
      901 acctggtcga gatcaacgag gcgttcgcgt cggtggtgct gcgctattgc caggccttcg
      961 acctgcaccc cgagatcgtc aacgtgaacg gcggcgccat cgccatgggg catccgctcg
     1021 gcgccaccgg cgcgatgatc ctcggcaccg tgctcgacga gctcgagcgc accgacgagg
     1081 tgaccgcgct cgtgacgctg tgcatcggcg ccggcatggg cacggcgacc atcatagaga
     1141 gggtgtaatc gtcagctgcc gcgaatagac ttatcctgta ggggcgggga ggaaggtcat
     1201 gcgtccggtc gttcgagcct tgttcgtggt ggtatgcatc gccgccggag gcggggcccg
     1261 cgccgacgac gaggccgatc gcctgcagct cgcacgcgag ctgatcatcc tcaatcagat
     1321 gctgaaaaac ctcgacgcga tggtgcccac catgatgaac gccatgaagc cgatcatcac
     1381 gcgcggcgat gcgaaggtcg agaaggacta tgatgccatc atgaagttga tgctgaacga
     1441 gttcgaaccc ttcaaggcgc agatgctgga cgatttcgag cgagtcgcgg cacgcgctta
     1501 taccaagggc gagctcgagg agatcgtcgc tttctcgaaa tcgccgactg ggcagaagat
     1561 ggcgaggttg gcgccgacgc tggcgcaggc cggcatggcc atcggccaga gctatggaga
     1621 gaaggtcgct gcgcagcttg ccgagaagat gaaggcggag ttgagaaagc gcggccacaa
     1681 tatctgaccg gtcggcacgc aagaggacat ggcccgatga acctgcagaa tttccgcttc
     1741 gagaccgacg ccgacggcat tgcgctcgcc acctgggaca tgccaggccg ttcgatgaac
     1801 gtgatcaccg tcgaggtgat ggacgagctg tcgcagatca tcgacaaggt cgcgggcgac
     1861 gccgccatca agggctgcgt gatcacgtcc ggcaaggatg ccttttccgg cggcgccgac
     1921 ctcaccatgc tgcagggtct cggcgccctt cacgacaagc tcgccaagga gaagggcgag
     1981 gaggcggcca tccaggtctt cttcgacgag tcgcgccgcc tttcgcttct ctaccgccgt
     2041 ctcgaaacca gcggaaagcc gttcgcggcg gccgtgcacg gcgtctgtct cggcggcgct
     2101 ttcgagctgg cgctcgcctg tcactatcgc gtcgtctccg acgccgacgc cacccgcgtc
     2161 gggctgcccg agatcaaggt cggcctcttc cccggtgccg gcggcacgca gcgcgtggcg
     2221 cggctgatgc agaccggcga tgcgctgcag atgctgttca agggcgagca gctccgcgcc
     2281 ctgatggcgc gcaacatggg cctcgtgcac gaggtcgcgc cgcgcgatgc cgtcgtcgac
     2341 aaggccaagg cgtggatcaa gggcggcggc tcggcggtgg cgccatggga tcaggagaag
     2401 ttccgggcgc cgtcgggcaa ggtctactcc cctggcggca tgatgatctg gccgccggcc
     2461 aacgccatct accggcgcga gacgcacgac aactacccgg ccgccaaggc catcctgcag
     2521 gcggtctacg aaggcctgca gctgcccatg gatctcgcgc tgcgggtcga gagccgatac
     2581 ttcgccaaga tcctgcgctc gaaggaggca gcggcgatga tccgcacgct gttcgtgtcc
     2641 atgcaggagc tcaacagggg ggcgcgccgg ccgcacggca tcccggccgc gaagctgacc
     2701 aaggttggcg tcctcggcgc cggcttcatg ggcgcgggca tcgcctacgt gaccgcgaat
     2761 gcgggcatcg acgtggtgct gatcgatcag agcgtggagg ccgccgaaaa gggcaaggcg
     2821 cactctcaca agctggtcac ggatcagatc atgaaaggcc gcgccaagac cgccgatcgc
     2881 gatgcgttgc tcgcccgcat cacccctagc gccgattatg gcgacctcaa gggttgcgac
     2941 ctgatcgtcg aggcggtgtt cgaggatccc aaggtcaagg cagaggcgat cgccaaagcc
     3001 gaggcggtga tcggacccga tgcgactttc gcctccaata cgtccacgct gccgatcagc
     3061 gggctcgcca agggtgcaaa acgtcccgac cagttcatcg gcatccactt cttctcgccg
     3121 gtcgagaaga tgatgctcgt cgagatcatc atgggcaagc agaccggcga caaggcgctc
     3181 gcggtggcgc tcgattacgt gcgggccatc aagaagaccc cgatcgtggt caatgattcg
     3241 cgcggcttcg tcgccaaccg ctgcgtcacc gcctacctcc tcgaaggtca cctcatgctg
     3301 accgaaggcg taccgccgcc catgatcgag aacgccggcc ggatggccgg gatgccggtc
     3361 gggccgctgt cgctcaacga cgaggtcgcg gtcgatttgg cgctcaagat cctcaaggcc
     3421 accaaggtgc aagtcgggcc tcaggcgatc aacccggcgc aggaagagct gctcgtgcgc
     3481 atggtcgaga aggaaggacg tttcgggcgc aagaacaaga agggctttta cgattatccg
     3541 gagggcggca agaagcgtct gtggcccggg ctcaccgatc tgcagcccac gcatctggat
     3601 cccgacacga tcgatttcca ggaattgaag gaccggctcc tggtgacgca ggcgctcgag
     3661 gcggcgcgca ccgtcgagga gggcgtgatc accgatccgc gcgaggccga tgtcggctcg
     3721 atcctcggct ttggcttcgc cccgttcacg ggcggggcgc tcagctacat cgatttcatg
     3781 ggcgcgaagg cgttcgtcga gctggcgcgc gagctgcaga gccggcacgg cgaccgcttc
     3841 gctccgaaca agctcctcct cgacatggcg gcgagcggcg gcacgtttta tggcgcggcg
     3901 cgatcgcgca aggcggcctg agcgcgtctc gcccgcggct cggccatgcc cggtcgcgcc
     3961 ctccaagccg ccgcgacggg agcgcgacga actcccgtta ctcgctcggg agctttttcc
     4021 cgcagacgcg cgccacgtcc tctcgcgaca cgccgatgtc gcggagcagg tggttgtcga
     4081 gttcgcctga cgcacgaagc tggccccggt gagcggcctc ggtctcgatc gcgcgtgcca
     4141 aagccgccgc gtagcgcagg ccggccgcaa ggcaggcgcg cgcgtgctgg acaatggaga
     4201 caagcccgtg atgccgctgg aacggggcag cgtgcccgag aagtgatgac atcggttgtg
     4261 gctccttcgt cgcaggagcc ttttctctaa acgtctattt gggcgtgccg caaagcatgc
     4321 tttctcggcc ctaccttaac ttt
//
LOCUS       DATAIQ010000640         1756 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_153979, whole genome shotgun sequence.
ACCESSION   DATAIQ010000640 DATAIQ010000000
VERSION     DATAIQ010000640.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1756)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1756)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1756
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_153979"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..242
                     /locus_tag="VHN20_10660"
     CDS             <1..242
                     /locus_tag="VHN20_10660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018259519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEX2726270.1"
                     /translation="AAVVWGWGAIVMLIGDNFVQPGLIGGAARLPFLWALIGIFGGIE
                     AFGLIGLFLGPVIMAALLTIWREWVEADTPATTTG"
     gene            410..1228
                     /locus_tag="VHN20_10665"
     CDS             410..1228
                     /locus_tag="VHN20_10665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015688820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phytanoyl-CoA dioxygenase family protein"
                     /protein_id="HEX2726271.1"
                     /translation="MQLSPQQLSEFDDQGYLFLPDCFSDEEVAVMRTEAEAIYASDRK
                     EVWREKSGAPRTAFAAHTYNEAFSLLSRHPRLVEPLQQLFGEPVYVHQFKINAKAPFD
                     GEVWQWHQDYGTWARDDGMPEPRAMNIAVFLDEVMAINGPLMFIPKSHRKGVLAAGHD
                     LQTTSYPLWTLDKETITRLCEEAAPPGGIGIVAPTGKPGSVLMFHGNLVHASPPNITP
                     YPRKIVYLTLCAVSNHITKFTREEWIAHRDFTPIAPVDDAALLHYARSARIAAE"
     gene            1267..>1756
                     /locus_tag="VHN20_10670"
     CDS             1267..>1756
                     /locus_tag="VHN20_10670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006612396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEX2726272.1"
                     /translation="MNLTSLLQERVDAGRPVRAALIGAGKFGSMFLSQVPTIAGLEVA
                     MIADLDPERARAACRNVGWDEARIGATRFVDDGRAACDADGVEVVIEATGAPAAGIAH
                     ALAAIAAGKHVVMVNVEADVLVGPLLARKARDAGVVYSMAYGDQPALVAEMVDWARAT
                     GFT"
BASE COUNT          280 a          633 c          572 g          271 t
ORIGIN      
        1 ccgccgccgt cgtgtggggc tggggcgcga tcgtcatgct gatcggcgac aacttcgttc
       61 agccaggact catcggcggt gcggcgcgcc tgccgttcct gtgggcgctg atcgggattt
      121 tcggcggcat cgaggcgttc gggctgatcg gcctgttcct cgggccggtg atcatggcgg
      181 cgctgctgac gatctggcgc gaatgggtcg aagccgacac gccggccacg accaccgggt
      241 gaaggggtag cggaccctcg caccgtcgca cccgctgctc gcctgcgcaa ggctcgccgc
      301 cccgccccgg ctgcgctaag ctccccccat cctgaacggc gacttcggca ggcgccgcac
      361 gccgcgcccg cgagacgcgg caacaaaaaa tcattgcgga ggaaatgcca tgcagctctc
      421 gccccagcag ctctccgaat tcgacgatca gggctatctg tttctccctg actgcttctc
      481 cgacgaggag gtcgcggtca tgcggaccga ggccgaggcg atctacgcca gcgaccgcaa
      541 ggaggtctgg cgcgagaaat ccggcgcgcc gcgcacggcc ttcgcggccc acacctacaa
      601 cgaggcgttc agcctcctgt cgcgccatcc gcgcctggtc gagccgctgc aacagctctt
      661 cggcgagccc gtctacgtcc atcagttcaa gatcaacgcc aaggcgccct tcgacggcga
      721 agtttggcag tggcaccagg actacggcac ctgggcgcgc gacgacggca tgcccgaacc
      781 gcgcgccatg aacatcgccg tcttcctcga cgaggtcatg gccatcaacg gccccctcat
      841 gttcatcccc aagagccaca ggaagggcgt actcgccgcc gggcatgatc tgcagacgac
      901 gtcctacccg ctgtggaccc tcgacaagga gaccatcacg cgcctgtgcg aggaggctgc
      961 gcctccgggc ggcatcggca tcgtcgcgcc gaccggcaag ccgggctcgg tgctgatgtt
     1021 ccatggcaac ctggttcacg cgtcgccgcc gaacatcacg ccctatccac gcaagatcgt
     1081 ctacctgacg ctgtgcgccg tctcgaacca catcacgaag ttcacgcggg aggaatggat
     1141 cgcgcatcgc gatttcacgc cgatcgcgcc cgtcgacgac gccgcgctgc tgcactacgc
     1201 gcgcagcgcc aggatcgcgg cggaatagcc tcctctccgc gcacacggga gagtaacgga
     1261 gccaccatga acctcacctc tctcctccag gaacgtgtcg atgccggccg gccggtgcgc
     1321 gccgcgctga tcggcgccgg caagttcggc tcgatgttcc tgtcgcaggt gccgacgatc
     1381 gccgggctcg aggtcgccat gatcgccgac ctcgaccccg agcgcgccag ggccgcgtgc
     1441 cgcaacgtcg gctgggacga ggcccgcatc ggcgcgacgc gtttcgtcga cgacggccgt
     1501 gccgcctgtg acgccgacgg cgtcgaggtg gtgatcgagg cgaccggcgc gccggccgcc
     1561 ggcatcgccc atgccctcgc cgcgatcgcg gccggcaagc atgtcgtgat ggtcaacgtc
     1621 gaggccgacg tcctcgtcgg cccgctgctc gccaggaagg cgcgcgatgc gggtgtcgtc
     1681 tattcgatgg cctatggcga ccagccggcc ctggtcgccg agatggtcga ctgggcgcgc
     1741 gcgacaggct tcacca
//
LOCUS       DATAIQ010000641         2109 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_154006, whole genome shotgun sequence.
ACCESSION   DATAIQ010000641 DATAIQ010000000
VERSION     DATAIQ010000641.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2109)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2109)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2109
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_154006"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..428)
                     /locus_tag="VHN20_10675"
     CDS             complement(<1..428)
                     /locus_tag="VHN20_10675"
                     /inference="COORDINATES: protein motif:HMM:NF020909.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1993 domain-containing protein"
                     /protein_id="HEX2726273.1"
                     /translation="MAVSLHDASVAVMLQMLGALSGVIDKAAAHCAEKKIEPAALLTA
                     RLYPNMYMFQKQVQVACDWGRNTAGRLAGIDIPKMADDEKSFDDLKSRIARTIEFLKS
                     VDAAAVNDGADRDVRWAAGPNTREMKGADFVLHQALPQFF"
     gene            427..570
                     /locus_tag="VHN20_10680"
     CDS             427..570
                     /locus_tag="VHN20_10680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726274.1"
                     /translation="MNVLPLAFPWLLKAATLPAEAWQINLTSLCRRAVAVPRDIVQGI
                     WTD"
     gene            610..1113
                     /locus_tag="VHN20_10685"
     CDS             610..1113
                     /locus_tag="VHN20_10685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726275.1"
                     /translation="MRLPIATGIIVLVAGLLQACQSAQSGKTSTEIASAQAAQPSAAP
                     VQIQHTSRLREQARAYAERLNQGRCAAGAEAASFDATSNALEKDLPALKAGEAAVMGA
                     SDARLAGEVERALAEARLDIGDAARTGGCADIANVQYRMVLRSFPGAAHAGYRRRAEM
                     GLSGLQL"
     gene            1321..2025
                     /locus_tag="VHN20_10690"
     CDS             1321..2025
                     /locus_tag="VHN20_10690"
                     /inference="COORDINATES: protein motif:HMM:NF024863.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDSL-type esterase/lipase family protein"
                     /protein_id="HEX2726276.1"
                     /translation="MLLVSSAAFAQSIRIVAIGDSNTAGFGVAREEAFPARLEALLRA
                     AGHDAQVWNAGITGDTFYGILARLDRYVPEGIQIAIVQAGFNDMLRRTEPTLVVGHIE
                     AILARLQARRVNTVLCGFFYPDWDAVGQALARQHGAVFVDGGSCYDGRYRIDGLHMSP
                     AGHQMVAARLLPVIEGLVAQARNSARIGQPHRLEAHAARPSRAKPQPARASAGAQVTN
                     AASRAGGKGDRNGRAE"
BASE COUNT          330 a          738 c          703 g          338 t
ORIGIN      
        1 aagaagaact gcggcagcgc ctgatgaagg acgaagtccg cgcccttcat ttcgcgcgtg
       61 ttcggccccg cggcccatcg cacgtcccgg tcggccccgt cattgaccgc ggccgcatcg
      121 accgacttca ggaactcgat cgtccgcgcg atgcggctct tgaggtcgtc gaaggatttc
      181 tcgtcgtccg ccatcttggg gatgtcgatg ccggcgaggc gcccggcggt gttgcgcccc
      241 cagtcgcacg ccacctgcac ctgcttctgg aacatgtaca tgttggggta cagcctcgcc
      301 gtcagcaggg ccgccggctc gatcttcttc tctgcgcaat gcgccgccgc cttgtcgatc
      361 acgcccgaca gggcaccgag catctgcagc atcaccgcaa ccgaagcgtc gtgcaacgaa
      421 accgccatga acgtcctccc ccttgccttc ccgtggctct tgaaggcggc cacactgccc
      481 gcggaagcct ggcagatcaa cctgacctcg ctttgtcgca gggccgttgc agttcctcgc
      541 gacatcgtgc agggcatctg gaccgactga ttcgttcgcg gctcccggcc ccatatgcgg
      601 aggtttttca tgcgattgcc catcgcaaca ggcattatcg tgctcgtcgc gggcctgctg
      661 caagcatgcc agtccgcgca atccgggaag accagcaccg aaatcgcctc agcgcaggcc
      721 gcgcaaccaa gcgctgcccc ggtgcaaatc cagcacacca gccgcctccg ggaacaggcg
      781 cgggcctatg ccgaacgtct gaaccagggc cgctgcgccg caggcgcgga agccgcttcg
      841 ttcgatgcga cctcgaatgc gctcgagaaa gaccttccgg ccctgaaagc gggagaggcg
      901 gcggtcatgg gcgcctccga cgcccggctt gccggagagg tggagcgcgc gctcgcggag
      961 gcgcgcctcg atatcggcga cgcggcccgt accggcggct gcgccgacat cgcgaacgtc
     1021 caataccgca tggtgctccg ctcctttccc ggggccgccc acgctggcta tcgccgccgc
     1081 gccgaaatgg gcttgagcgg gcttcagctc tgaggcttgg caagctttgc cgtctggcgc
     1141 ggcaggccgc gcgatgctac atctcggcat ctggcatcgg tggggtccgg tgcgcgcgcc
     1201 cctcgccgcc ccggcgagcg gatgagtgcg caagcgcgtg gaacgctcag gcgagaaaac
     1261 tcgtgccagg ggggtgtgat gtcgccaccg cgcctgttcg cctgtctcct cgtgctcggc
     1321 gtgctgctgg tctccagcgc ggcatttgcc caaagcatcc gcatcgtggc gatcggcgac
     1381 agcaacaccg ccggcttcgg ggtcgcgcgc gaggaggcgt tcccggcgcg gctggaagca
     1441 ctgttgcgcg ccgccgggca cgacgcacag gtgtggaacg cgggcatcac gggggacacg
     1501 ttctacggga tcctcgcccg gttggaccgc tacgtccccg aaggcatcca gatcgccatc
     1561 gtgcaggccg gcttcaatga catgctgagg cgcaccgagc cgacgttggt cgtcggccac
     1621 atcgaggcga tcctggcgcg gctgcaggcg cgtcgcgtca acaccgtgtt gtgcggtttc
     1681 ttctacccgg attgggatgc cgtcggccag gcgctggccc gccagcacgg cgccgtgttc
     1741 gtcgacgggg gttcctgcta cgatggccgt taccgcatcg acgggctgca tatgagcccg
     1801 gcgggccatc agatggtcgc cgcccgtctg ctgcccgtca tcgaggggct cgtggcgcag
     1861 gcgcgcaaca gcgccaggat cggccagcca catcggctcg aggcgcacgc cgccaggccg
     1921 tcccgcgcga agcctcagcc ggcgagagcg tctgccggtg cgcaagtcac gaacgcagca
     1981 tcccgtgcgg gcggcaaagg cgacaggaat ggcagggccg aatgactgcg ggatgcagcc
     2041 gatcacgaac gcgtgacgcc gcagcgcgcc gcagccgccg gcatccgcgg cgcgacggag
     2101 cgttccata
//
LOCUS       DATAIQ010000642         1506 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_403175, whole genome shotgun sequence.
ACCESSION   DATAIQ010000642 DATAIQ010000000
VERSION     DATAIQ010000642.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1506)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1506)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1506
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_403175"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..750)
                     /locus_tag="VHN20_10695"
     CDS             complement(<1..750)
                     /locus_tag="VHN20_10695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008961032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HEX2726277.1"
                     /translation="MDIFILIGGFTLLCLLGMPVAYALGLAAIFAALWIDLPLEAVML
                     KVSDGTDDFALLAIPFFILAGGIMAEGGMAERLVNLAKVFVGFIRGGLALVNILASTM
                     FGCISGSSVADTASIGSVMIPQMIRNGYPRLFAVNVTVSGSLQPLLIPPSHNAVIYSL
                     AAGGTISVADLFMAGVIPGFLLGLSLMVLCLIIAHRQNFPKGEVVPPRRAIKIAGEAF
                     WGLLTVFIILGGILSGVFTPTESAAVACVYSF"
     gene            complement(766..1284)
                     /locus_tag="VHN20_10700"
     CDS             complement(766..1284)
                     /locus_tag="VHN20_10700"
                     /inference="COORDINATES: protein motif:HMM:NF016200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HEX2726278.1"
                     /translation="MKAQYSRAMELLHRVCMLISGACLVIITLIIPWGVFTRYVLNSA
                     SSWPEPLAVLLMVWFSFLSAAICYRENLHIGVAVIPMMLQGAARTAVGWLIQICMMGT
                     NLFMLYYGTKLVQTTWYQSISDFPGYSVGAAYLPVPLGGAIVTLFVIERLWEGNLFAE
                     PTEDSLSPVSTE"
BASE COUNT          315 a          484 c          481 g          226 t
ORIGIN      
        1 aaaggaatag acgcaggcca cggccgccga ctcggtcggc gtgaagacgc cgctgagaat
       61 cccgccgagg atgatgaaca cggtcagcag gccccagaag gcttcgccgg cgatcttgat
      121 ggcgcgccgc ggcggcacga cctcgccctt cggaaaattc tgccggtggg cgatgatcag
      181 gcacagcacc atcagcgaga gcccgagcag aaagccgggg ataacgccgg ccatgaacag
      241 atccgcgacc gagatcgtcc cgccggcggc cagggaatag atcaccgcgt tgtgcgacgg
      301 cgggatcagc agcggctgca gcgagcccga caccgtcacg tttaccgcga acaggcgcgg
      361 gtagccgttg cggatcatct gcgggatcat caccgagccg atcgaggcgg tgtcggcaac
      421 cgacgatccc gagatgcagc cgaacatggt cgaggcgaga atgttgacga gcgcgagacc
      481 gccgcggata aagccgacga acactttcgc gagattgacg agccgctccg ccataccgcc
      541 ttcggccatg atgccgccgg cgagaatgaa gaacgggatc gccaggagcg cgaaatcgtc
      601 ggtaccgtcc gagaccttga gcatgacggc ttcgagcggc aggtcgatcc acagcgccgc
      661 gaagatcgcg gcaaggccga gggcgtaggc gaccggcatg ccgagcaggc acaggagcgt
      721 gaagccgccg atcaggatga aaatgtccat ctcgggctcc cactcctatt cggtgctgac
      781 agggctgagg ctgtcttcgg tcggctcggc gaacaggttg ccttcccaaa gccgctcgat
      841 cacgaacaga gtgacgatgg ccccgccgag cggaacgggc agataggcgg cgccaacgga
      901 atagccggga aaatcggaga tcgactggta ccaggtcgtc tgcacgagct tggtgccgta
      961 gtacagcatg aagaggttcg tccccatcat gcagatctgg atcagccagc ccaccgcggt
     1021 ccgcgcggca ccctggagca tcatcgggat cacggcgaca ccgatatgca ggttctcacg
     1081 gtagcagatc gccgccgaca ggaacgagaa ccacaccatc agcagcacgg ctagcggctc
     1141 cggccatgac gacgccgagt tcagcacgta gcgggtgaac acgccccacg ggatgatcag
     1201 cgtgatgatc accaggcagg cgccggagat cagcatgcag acccggtgca gcagctccat
     1261 cgcgcggcta tattgcgctt tcatgccccc tcccctgatg caatcgaggc cggcgcgacc
     1321 gctcccggat cggccggcct cgaccatccc gcggccttga gcctacttca cgtcctgaat
     1381 gcgcttgatc aggtccgcgt gttgcgcgcc gtgcttgtcc cagaccggtt tgacggcgtc
     1441 ctggaacttc ttcttgtcgg cgacaggcac gatctccacg cccgcctcct tcatctcctt
     1501 gatcga
//
LOCUS       DATAIQ010000643         2123 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_403248, whole genome shotgun sequence.
ACCESSION   DATAIQ010000643 DATAIQ010000000
VERSION     DATAIQ010000643.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2123)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2123)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2123
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_403248"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..476)
                     /locus_tag="VHN20_10705"
     CDS             complement(<1..476)
                     /locus_tag="VHN20_10705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin family protein"
                     /protein_id="HEX2726279.1"
                     /translation="MKSLHELSEREVLALAIANEEEDSRIYQSFADRLRPDFDASAGI
                     FEDMAEEEREHRDSLYQLYRERFGAHLPPIRREDVRGFLRRRTPWWEPSLDLDKMRGE
                     AELMERQAANFYERSAERATDLAVRQLFTHLAEIERSHEKRAEAITNAHLTADTAAA"
     gene            909..1394
                     /locus_tag="VHN20_10710"
     CDS             909..1394
                     /locus_tag="VHN20_10710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015931760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HEX2726280.1"
                     /translation="MANDTRDEPPARRPIQRLLHLYWRFARGLTLGVRAAAFDHANRI
                     VLVKHTYVPGWHFPGGGVEHGETAHDALVRELREEALIELKGEARLHAVYLNRNASQR
                     DHVLLYVARDFEFVDLKRREFEIADVQAFPLDALPADATRSTRVRLEEIATGRTPALI
                     W"
     gene            1517..2035
                     /locus_tag="VHN20_10715"
     CDS             1517..2035
                     /locus_tag="VHN20_10715"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011085246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HEX2726281.1"
                     /translation="MTELSLVIRPEVAADAEAIERLHERAFGPGRFARTAYRIREGAA
                     HRLDLSFTALVGTLLVGSVRLTPVAAGAQPALFLGPLTVDPAFENRGIGRGLIQRALD
                     ASRDADHALVLLVGDEPYYARLGFKRVPRGQLLMPGPVDPDRLLAAELVVGAIEQARG
                     TILPAWPGISPK"
BASE COUNT          333 a          716 c          726 g          348 t
ORIGIN      
        1 gcggcggcgg tgtcggcggt gagatgggcg ttggtgatcg cctcggcgcg cttctcgtgg
       61 ctgcgctcga tctcggcgag atgggtgaag agctggcgca cggcgaggtc ggtcgcgcgc
      121 tcggccgagc gctcgtagaa attcgccgcc tggcgctcca tcagctcggc ctcgccgcgc
      181 atcttgtcga ggtcgaggct cggctcccac cagggcgtgc gccggcgcag gaagccgcgc
      241 acgtcctcgc gccggatcgg cggtaggtgc gcgccgaagc gctcgcggta gagctgatag
      301 agcgaatccc ggtgctcgcg ctcctcctcg gccatgtcct cgaagatccc ggccgacgcg
      361 tcgaaatccg gccgcaggcg gtcggcgaag ctctggtaga tgcgcgaatc ttcttcctcg
      421 ttggcgatcg ccagagcgag gacctcgcgc tcggagagct cgtgcaggga cttcattggc
      481 ggtcctcctg tttagaacct ctctaaacag gaatggcgct gttgttcaac cgcggaagcc
      541 tgggcccgga gtcaggcgtg cgtgcccggc aagagcgccg agaagatctt cgggtcggcc
      601 agatcgacag cgggcgacca gacgtaacgc cgggaccgga accagcccgt gagaagtagg
      661 agcatcggaa cacctgtgaa ggcgccaccc gtaagcccga gaggttacgg gaatctttcc
      721 gtgcagcccg gtccgggaag ggcagctatg ccggcaccgc atgagcggcg gagcgcgacc
      781 gattcagatc gactggatcc cgatccgtta cgtcttgagt cgctgatccc cgatcggcaa
      841 agtggtatcc accccgcccg gtcatgctct aaagcatccg ctgttcagca cgcatcccac
      901 gagtcccgat ggcgaatgat acccgcgacg agccgccggc ccggcggccg atccagcgcc
      961 ttctccacct ttattggcgc ttcgcgcgcg gcctcacgct tggcgtgcgc gcggcggcgt
     1021 tcgaccacgc caaccggatc gtcctggtca agcataccta cgtgccaggg tggcattttc
     1081 ccggcggggg cgtcgagcac ggcgagacgg cccatgacgc gctcgtccgc gagctgcgcg
     1141 aggaggcgct gatcgagctg aagggagagg cgcgcctgca cgcggtctat ctcaatcgca
     1201 acgcgtcgca gcgtgaccac gtgctcctct acgtcgcccg ggatttcgaa ttcgtcgacc
     1261 tgaagcggcg cgagttcgag atcgccgacg tccaggcctt tccgctcgac gcgctgcccg
     1321 ccgatgcgac gcgcagcacg cgcgtgcgcc tcgaggaaat cgcgaccggg cggacgccgg
     1381 ccttgatctg gtgacaaacg ggctcccgtg tgggagagga gcctgccgcc ctacggctaa
     1441 gtaagacgca ttttctgcgg cgaaccggtg cccgctccgc cggaaaatgc tgtaaggcga
     1501 cggcgagacc agccccatga ccgaactgtc tcttgtgatc cgtcccgaag tcgccgccga
     1561 tgccgaagcc atcgagcggc tgcacgagcg cgctttcggg ccgggccgct tcgcgcgcac
     1621 ggcctaccgc atccgcgaag gcgccgccca tcgcctcgac ctctcgttca cggcgctggt
     1681 cgggacgctg ctcgtcgggt ccgtccgcct cacgccggtg gcggcggggg cgcagccggc
     1741 gctgttcctg ggcccgctga cggtcgaccc cgccttcgag aatcgcggca tcggccgcgg
     1801 ccttatccag cgggccctgg atgcgtcgcg cgacgccgat catgccctcg tgcttctggt
     1861 cggcgacgag ccctattacg cgcggctcgg cttcaagcgc gtgccgagag ggcagctgct
     1921 catgccgggt ccggtggacc ccgaccgcct gctggcggcc gagctggttg tgggcgcaat
     1981 cgaacaggct cgcggcacga tcctgccggc ctggccgggg atatcaccca aatagccatc
     2041 gtcatttcgg ggcggaccaa aggtccgaac cggaagaccg ggtgagactg acaagcggga
     2101 tcggcagtcg ctcgcgcatg ttt
//
LOCUS       DATAIQ010000644         2787 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_310893, whole genome shotgun sequence.
ACCESSION   DATAIQ010000644 DATAIQ010000000
VERSION     DATAIQ010000644.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2787)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2787)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2787
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_310893"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            99..1835
                     /locus_tag="VHN20_10720"
     CDS             99..1835
                     /locus_tag="VHN20_10720"
                     /EC_number="6.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003952 - NAD+ synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD+ synthase"
                     /protein_id="HEX2726282.1"
                     /translation="MAAPSTFKIALAQLNPTLGDVTGNLEKARSARAEAARLGADVVM
                     FPEMFLAGYPPEDLVLKPAFQDACRKAAEDLARETGDGGPAVLIGLPWAEDGLYNAYA
                     LLDGGAVAAVRFKVDLPNYGVFDEKRVFVPGPLPGPVVVRGVRVGIPVCEDIWGEEVV
                     ECLAETGAEMLLVPNGSPYWRGKTNERFNIAAARVSESGLPLVYLNQVCGQDELVFDG
                     ASFVLNNDASLAGQLVAFREAIAVTSWQRTEGGWRCVEAPREVTEEGDQADYAACVLG
                     LRDYVDKNRFPGVVLGLSGGIDSALCATMAVDALGASRVHCIMLPYRYTSGESLDDAA
                     DCARRLGVRYDTVPIATAVEGLEAALQPLFAGKPRDITEENLQSRARGTILMSVSNKF
                     GPMVVTTGNKSEMSVGYATLYGDMNGGFNPIKDLYKMEVYRISALRNRWKPSWALGPD
                     GTVIPDNIIAKAPSAELRENQKDQDSLPPYDVLDDILECLVELEMRVAEVVARGHDLE
                     TVKKVERLLYLAEYKRRQAAPGVKVTRKNFGRDRRYPIVNRFRDEGRAAFQPDEALQR
                     AVGKTSREAVDF"
     gene            complement(1966..2772)
                     /locus_tag="VHN20_10725"
     CDS             complement(1966..2772)
                     /locus_tag="VHN20_10725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016846407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate dehydrogenase"
                     /protein_id="HEX2726283.1"
                     /translation="MSTTRVAIAGLGAIGKALARRLADGVPGLTLAAVAARDHAKAQA
                     WLDAQGIACPLVALDEFPAHADLAVEAAPAAILDQICRPMLTAGRKVMVLSAGALLPR
                     PDLIELARSTGGQIIVPTGALLGLDAVTAAAEGTINAVRMTTRKPPGGLVGAPYLVAN
                     GISVEGLNEAKRVFSGTAREAAAGFPANVNVAAALSLAGIGPDDTHIDIWADPAVTRN
                     CHTIEVDSDSARFAMTIENIPSENPKTGRITALSALAALRKMHAPLRVGT"
BASE COUNT          425 a          940 c         1000 g          422 t
ORIGIN      
        1 gggagcggcg tcgtcacgct ggcagctcgc gcgtgagagc gcggcgcatt tccggcggcc
       61 gcgttgcggc cccgaggctg gcgggttaaa tccgccatat ggccgccccc agcaccttca
      121 agatcgctct cgcccagctc aaccccaccc tgggcgacgt caccggaaac ctcgagaagg
      181 cgcgcagcgc gcgcgccgag gcggcgcggc tcggcgccga tgtcgtgatg ttcccggaga
      241 tgttcctggc cggctatccg cccgaggacc tggtcctcaa gcccgccttc caggatgcct
      301 gccgcaaggc cgccgaggat ctcgcgcgcg agaccggcga cggcggcccg gcggtgctga
      361 tcgggctgcc gtgggccgag gacggcctct acaatgccta cgcgctgctc gacggcggcg
      421 ccgtcgcggc cgtgcgcttc aaggtcgacc tgccgaatta cggcgtgttc gacgagaagc
      481 gcgtgttcgt tccgggcccg ctgccgggtc ccgtggtggt gcgcggcgtg cgcgtcggca
      541 ttcccgtctg cgaggacatc tggggcgagg aagtggtcga gtgcctcgcc gagaccggcg
      601 ccgagatgct gctcgtgccg aacggctcgc cgtattggcg cggcaagacc aacgagcgct
      661 tcaatatcgc cgcggcgcgc gtcagcgaaa gcgggctgcc gctcgtctat ctcaaccagg
      721 tctgcggcca ggacgagctg gtgttcgacg gcgcgtcgtt cgtgctgaac aacgatgcct
      781 ctctcgccgg ccagctcgtc gcgttccggg aggcgatcgc ggtgacgtca tggcagcgca
      841 cggagggcgg ctggcgctgc gtcgaggcgc ctcgagaggt gaccgaggaa ggcgatcagg
      901 ccgactacgc cgcctgcgtg ctgggcctgc gcgattacgt cgacaagaac cgcttcccgg
      961 gcgtcgtgct cgggctgtcg gggggcatcg actcggcgct gtgcgcgacc atggcggtcg
     1021 acgcgctcgg cgcaagccgg gtgcactgca tcatgctgcc gtaccgctac acgtccggcg
     1081 aaagcctcga cgatgccgcc gattgcgccc ggcgcctcgg cgtgcgctac gacacggtgc
     1141 cgatcgccac ggccgtggaa ggccttgagg cggcgctgca gccgctcttc gccggcaagc
     1201 cgcgcgacat caccgaggag aacctgcaga gccgcgcgcg cggcacgatc ctgatgtcgg
     1261 tctccaacaa gttcgggccc atggtcgtga cgacgggcaa caagtccgaa atgtcggtcg
     1321 gctacgccac gctgtacgga gacatgaacg gcggcttcaa cccgatcaag gacctctaca
     1381 agatggaggt ctaccgcatc tcggcgctgc gcaaccgttg gaagccgagc tgggcgctcg
     1441 ggccggacgg cacggtcatc cccgacaaca tcatcgccaa ggcgccgagc gccgagctgc
     1501 gcgagaacca gaaggaccag gactcgctgc cgccctacga cgtgctcgac gacatcctcg
     1561 aatgtctggt ggagctggag atgcgcgtcg ccgaggtcgt ggcgcgcggc cacgatctgg
     1621 agaccgtcaa gaaggtcgag cggctcctct atctggccga atacaagcgc cgtcaggcgg
     1681 cgcccggcgt gaaggtgacg cgcaagaatt ttgggcgcga ccgccgctac ccgatcgtca
     1741 accgcttccg cgacgagggc cgcgccgcct tccagccgga cgaggcgctg cagcgcgccg
     1801 tcggcaagac atcccgcgaa gccgtggatt tttgaacctc tcccgccgat ctcggccgtt
     1861 gccgagatcc gctttccttc gatgcgcaag tcgggaacac ccgacttgcg catttaaaaa
     1921 ggggtggatc tcgggaacac ctgagatcca ctgggagcgg tggcgctacg tcccgacgcg
     1981 caggggcgcg tgcatcttgc gcagggcggc gagggccgag agcgccgtga tgcgcccggt
     2041 cttcgggttc tccgagggaa tgttctcgat cgtcatggca aagcgggcgg agtcggaatc
     2101 cacctcgatc gtgtggcagt tgcgggtgac ggccgggtcg gcccagatgt cgatatgtgt
     2161 gtcgtccggc ccgatgccgg cgagcgacag ggcggccgcc acgttgacgt tggccggaaa
     2221 gccggccgcc gcttcgcgcg ccgtgccgct gaacacgcgc ttcgcctcgt tgagcccctc
     2281 gaccgagatg ccgttcgcca ccaggtaggg ggcgccgaca agcccgccgg gcggcttgcg
     2341 cgtggtcatg cgcacggcgt tgatcgtacc ttccgcggcg gccgtcacgg cgtcgaggcc
     2401 gagcagcgcg ccggtcggca cgatgatctg gccgcctgtc gacctggcca gctcgatcag
     2461 gtccgggcgc ggcagcagcg cgccggcgct caacaccatc actttcctgc cggccgtcag
     2521 catcggccgg cagatctggt cgaggatggc ggcgggggcc gcttcgacgg caaggtccgc
     2581 atgcgccggg aattcgtcga gggcgacgag cggacacgcg atcccctggg cgtcgagcca
     2641 cgcctgcgcc ttggcgtggt cgcgggccgc taccgcggcg agggtgaggc cgggaacgcc
     2701 gtcggccagg cggcgcgcca gcgcctttcc gatggcgccg aggccggcaa tggcgacgcg
     2761 ggtagtggac atggacgatc ctcacgg
//
LOCUS       DATAIQ010000645         2143 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_33639, whole genome shotgun sequence.
ACCESSION   DATAIQ010000645 DATAIQ010000000
VERSION     DATAIQ010000645.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2143)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2143)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2143
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_33639"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..290
                     /locus_tag="VHN20_10730"
     CDS             <1..290
                     /locus_tag="VHN20_10730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011582018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-dependent DNA ligase"
                     /protein_id="HEX2726284.1"
                     /translation="PALTKKLEALSEPPGFTGNAPGGPSRWSTERSGEWEPLRPELVV
                     EVRYDHVTDERFRHGTKLMRWRPDKAPRQCTFEQMQLEARPSRLVARMMEG"
     gene            291..1163
                     /gene="ligD"
                     /locus_tag="VHN20_10735"
     CDS             291..1163
                     /gene="ligD"
                     /locus_tag="VHN20_10735"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF045432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="non-homologous end-joining DNA ligase"
                     /protein_id="HEX2726285.1"
                     /translation="MAAAKEETTIAGVRLTSPDKVLYPEQGTTKRDLAEYYLAVAGHI
                     LPHVARRPITLVRCPTGRQKKCFYQRHAGSGVPPELGEVEISGFEESGAYLFIKDVKG
                     LIALVQMGVLEIHPWGARVDKPHRPERLIFDLDPGEGLGFADVAAAAREVRGALEGLG
                     LVSFLKTTGGKGLHVVVPLERRHEWADVKAFAKKTAEALAADAPARYLTRISKAERRG
                     RIFIDYLRNDPTSTAVAPYSTRARAGATVATPIAWDELSPNLDPAAFNVTTVPRRRKD
                     PWADIGKVRQRLPG"
     gene            1431..2138
                     /gene="pcaH"
                     /locus_tag="VHN20_10740"
     CDS             1431..2138
                     /gene="pcaH"
                     /locus_tag="VHN20_10740"
                     /EC_number="1.13.11.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002712829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018578 - protocatechuate 3,4-dioxygenase
                     activity [Evidence IEA];
                     GO_process: GO:0046278 - 3,4-dihydroxybenzoate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protocatechuate 3,4-dioxygenase subunit beta"
                     /protein_id="HEX2726286.1"
                     /translation="MTAYPKESLSAHPPYLYPGYTSTTKRSPSRPLVVIPQTLSEVTG
                     PVYGHESVRPEDMDLTRQKSGEPLGERIIVSGRVVDEDGRPVPDTLVEIWQANAAGRY
                     IHVNDQHDAPLDPNFFGAGRVVTDSEGRYRFVTIKPGAYPWRNHHNAWRPAHIHFSLF
                     GSSFLSRLVTQMYFPGDPLFAFDPIFNAIPDQASRERLISKFDLETTQPEWALGYNFD
                     IVLRGRSATPFEEPHDD"
BASE COUNT          353 a          765 c          704 g          321 t
ORIGIN      
        1 ggccagcgct gaccaaaaag ctcgaggcgt tgagcgagcc gccgggcttc accggcaacg
       61 cccccggcgg cccgagccgc tggagcacgg aacgctccgg cgaatgggag cccctgcggc
      121 ccgaactcgt cgtcgaggtg cgttacgacc acgtcacgga cgagcgcttc cggcacggca
      181 ccaagctgat gcgctggcgg cccgacaagg cgccgaggca atgcacgttc gagcagatgc
      241 agctggaggc gcggccctcc cggctcgtcg ccaggatgat ggaggggtga atggcggccg
      301 ccaaggagga gaccacgatc gccggcgtgc gcctgaccag tcccgacaag gtgctgtatc
      361 cggagcaggg cacgaccaag cgcgacctcg ccgaatatta cctcgccgtg gccggccaca
      421 tcctgccgca cgtggcccgc cggccgatca cgctcgtgcg ctgcccgacc gggcgccaga
      481 agaaatgctt ctatcagcgc cacgccggct ccggcgtgcc gcccgagctc ggcgaggtcg
      541 agatctccgg cttcgaggaa tccggcgcct acctgttcat caaggacgtg aagggcctga
      601 tcgccctcgt ccagatgggg gtcctggaga tccatccctg gggcgcccgg gtcgacaagc
      661 cgcaccggcc cgaacgcctg atcttcgacc tcgaccccgg cgaagggctc ggcttcgccg
      721 atgtcgcggc ggcggcccgg gaggtgcgcg gcgccctcga aggtctcggg ctcgtcagct
      781 tcctcaagac caccggtggc aaggggctcc acgtcgtcgt gccgctggag cggcgacacg
      841 aatgggcaga cgtcaaggcc ttcgccaaga agaccgccga ggcgctcgcc gccgatgcgc
      901 cggcccgtta cctgacccgc atctccaagg cggagcggcg cggccgcatc ttcatcgact
      961 acctgcgcaa cgacccgacc tcgacggcgg tcgcgcccta ttcgacccgg gcgcgggctg
     1021 gcgcgaccgt cgccaccccg atcgcttggg acgagctgtc gccgaacctc gacccggccg
     1081 ccttcaacgt cacgaccgtg ccccgccggc gcaaagaccc gtgggcggac atcggcaagg
     1141 tgcgccagcg gctgcccggc tgacggcaat gcccggaccg cgaatctgag ccgccgaggc
     1201 ggctaccacc cggcgacgac cctgcgagtt gagggacagg gcacaggatg gttgcaaccg
     1261 cggcgacgcc gctgcggcct tccttgcctt gatcggctcc gctgctaaat ctctgcgcgc
     1321 gcgggcggct tgcctttccc ggggcaactt ggcttatgtc aaagacactc gccgtgtcat
     1381 gccgtgtcct ggggttgcgt ggggccgctg atgtcggaag gaaccagagt atgaccgctt
     1441 acccgaagga gagcctgtcg gctcatccgc cgtatctcta cccgggctac acgtcgacga
     1501 cgaaacgctc gccgtcgcgt ccgctggtcg tcatcccgca gaccctgtcg gaggtgacgg
     1561 gcccggtcta cgggcacgag tcggtgcggc cggaagacat ggacctgacg cgtcagaagt
     1621 cgggcgagcc cctgggcgag cgcatcatcg tcagcggccg cgtcgtcgac gaagacggcc
     1681 gcccggtgcc ggacacgctg gtcgagatct ggcaggccaa cgcggccggc cgctacatcc
     1741 acgtcaacga ccagcacgac gcgccgcttg atccgaactt tttcggcgcc ggccgcgtgg
     1801 tcacggattc cgaaggccgc tatcgcttcg tcaccatcaa gccgggcgcg tatccgtggc
     1861 gcaaccatca caacgcctgg cggccggcgc acatccattt ctcgctgttc ggctcgtcct
     1921 tcctgtcgcg cctcgtcacg cagatgtatt tccccggcga tccgctcttc gccttcgacc
     1981 cgatcttcaa cgcgattccg gaccaggctt cgcgcgagcg cctgatctcg aaattcgatc
     2041 tcgagacgac gcagccggaa tgggcgctcg gctacaactt cgacatcgtg ctgcgcggac
     2101 gcagcgccac cccgttcgag gagccgcatg atgactgaga aga
//
LOCUS       DATAIQ010000646         4160 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_126736, whole genome shotgun sequence.
ACCESSION   DATAIQ010000646 DATAIQ010000000
VERSION     DATAIQ010000646.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4160)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4160)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4160
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_126736"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..508
                     /locus_tag="VHN20_10745"
     CDS             <1..508
                     /locus_tag="VHN20_10745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015927880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sugar phosphate nucleotidyltransferase"
                     /protein_id="HEX2726287.1"
                     /translation="VGDEPFALLLPDMLHHGASSCLAQMVATYERTGGNIVAVYEVPD
                     DQTHQYGICGVDRDMRITRMVEKPSKGTAPSNLAISGRYILQPDIFALLEKQERGAGG
                     EIQLTDAMIKLSEAQPFHATRFDGDIYDCGSKIGFLTANVAYALDRDDLAAPLRNEIG
                     SLLRRAKK"
     gene            complement(806..1159)
                     /gene="flaF"
                     /locus_tag="VHN20_10750"
     CDS             complement(806..1159)
                     /gene="flaF"
                     /locus_tag="VHN20_10750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008189154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0044781 - bacterial-type flagellum
                     organization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis regulator FlaF"
                     /protein_id="HEX2726288.1"
                     /translation="MAQGTQSPRELEANVLIKAASRLQAIRDDWDGRRAELDDALTFN
                     RKLWTILVTSATDAENPLPAAIKNNIANLAIFIFNRTMAVMTEPAPEKLAPLITINRE
                     LAAGLRSMPQQANAA"
     gene            complement(1125..1565)
                     /gene="flbT"
                     /locus_tag="VHN20_10755"
     CDS             complement(1125..1565)
                     /gene="flbT"
                     /locus_tag="VHN20_10755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009468624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0048027 - mRNA 5'-UTR binding [Evidence
                     IEA];
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA];
                     GO_process: GO:1902209 - negative regulation of
                     bacterial-type flagellum assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis repressor FlbT"
                     /protein_id="HEX2726289.1"
                     /translation="MSLKVELKPNERLIIGTAVIRNGDQRTRFFIEGDAPILREKDIL
                     TVDSADTPAKKIYLAVQLMYIQQDLSKHNRIYFPLVRDFLSAAPSSLPLIAEVNNRIL
                     SGDLYKALKAARKLISYEQELMSHATGGKSICAGGAGHAIAQGA"
     gene            complement(1607..3403)
                     /locus_tag="VHN20_10760"
     CDS             complement(1607..3403)
                     /locus_tag="VHN20_10760"
                     /inference="COORDINATES: protein motif:HMM:NF012874.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HEX2726290.1"
                     /translation="MSNEVVLTGAIRQNLLTLQKTTELQGKFQERLSSGRKVNSAIDN
                     PTNFFTAAGLNRRSNDLSLLLDGMSQGVKTLEAADNAMKMIVKTVETMQANVRQTRQD
                     KSFKGVTYAQESAGIGTAASAYLTFSGGGVGVTPVNVPLNIADIGGSRTTAQTSAPYA
                     PPSTAQKASLTGTVALNAGTFAQQVDVRIAFAGITADVTLANGSNRSAALAQIQAAIA
                     NSGLNGRVTATLDASNFLRLETINPEDGPITVTDNGTAGSATALVGAAPASVTGSNGQ
                     TNISINGTPVALTTSETNVSLAVAKANADLGPGHPFEAYANGANLQFRAKSHGASALA
                     VTGADSALFAAPSIGTAPTTPGSVKTVDQMVTSINTNPALTGKIRAHNDGGKLRIENL
                     SVEALTMVGATSTQITGSVGATNTQTIAGNEVRKSLIEQFNELRRQLDKLSDDASYNG
                     VNLLKADKLKITFNEINTSAIEIQAKDTNGVVRPINTSPESLDIGVATSDEFSTDALL
                     DARYDELGAALTELQTQSASFGSGLTMVQIREEFTKTMINTLEIGADKLTLADANEEG
                     ANLLALNTRQQLSQTALSLAAQAQQAVLRLFG"
     gene            complement(3594..>4160)
                     /locus_tag="VHN20_10765"
     CDS             complement(3594..>4160)
                     /locus_tag="VHN20_10765"
                     /inference="COORDINATES: protein motif:HMM:NF012903.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HEX2726291.1"
                     /translation="QSGAANTQKIAGNEVRKNLIGQFNDLRKQLDKLAGDATYNGVNL
                     VKADKLKVSFNETGSSNIEIQAKSTSGTVRGISTDANSLDIGEATSAEFADDAALDAR
                     LDKLSASLNTIQAQSSEFGSALTTVQNRQEFTKSMINTLQTGADALVLADANEEASKL
                     LALNTRQQLSQTALSLASQADQAVLRLF"
BASE COUNT          646 a         1238 c         1429 g          847 t
ORIGIN      
        1 cgtcggcgac gagcccttcg ccctgctgct gccggacatg ctgcaccacg gcgccagttc
       61 gtgcctcgcc cagatggtcg cgacttacga gcgcaccggc ggcaacatcg tcgcggtcta
      121 cgaggtcccg gacgaccaga cgcaccaata cggcatctgc ggcgtcgacc gcgacatgcg
      181 catcactcgc atggtggaga agccgtccaa gggaacggcg ccgtcgaact tggcgatttc
      241 cggccgctac atcctgcagc cggacatctt cgccctgctc gaaaagcagg agcgcggcgc
      301 gggcggcgag atccagctca ccgacgcgat gatcaagctt tcggaagcgc agcccttcca
      361 cgccacgcgc ttcgacggcg acatttacga ttgcggctcg aagatcggct tcctcaccgc
      421 caacgtcgcc tatgcgctgg accgtgacga tctggcagcg ccactgcgca acgagatcgg
      481 cagcctgctg cgcagagcga aaaagtagcc gtgtgtggcg gatttgcgtc gtgtcccgcc
      541 tcgccggcag ccgatgatgg gcgacgcgaa ttaggaatga tgctcgactt ccccgcgagt
      601 cctgcgccga agctgattcg gcggcgggaa gcgaatcaaa acgtatcagc gcgaatcgga
      661 ccaagccgat tcgagaggtc atcgcccttg gatgcgccac cgggggcatg cgcgaatcag
      721 gcggcagtcg ccgaattcgc ctctcgcgac gccgtgattc ggcgacgtcg cgacgatctt
      781 gatggtggat cagggagggc cggtgtcagg cggcgttggc ctgttgcggc atgctccgga
      841 gcccggcggc gagctcgcga ttgatggtga tcaggggcgc cagcttctcg ggcgcgggct
      901 cggtcatcac cgccatcgtc cgattgaaga tgaagatcgc caggttggcg atgttgtttt
      961 tgatcgcagc cggcagcggg ttctcggcgt ccgtggccga ggtgaccagg atcgtccaga
     1021 gcttgcgatt gaaggtgagc gcgtcgtcga gctcggcgcg ccggccgtcc caatcgtcgc
     1081 gaatcgcctg caggcggctg gccgccttga tcagaacgtt cgcctcaagc tccctgggcg
     1141 attgcgtgcc ctgcgccacc cgcgcatatg ctcttgccgc ctgttgcatg cgacatcaac
     1201 tcctgctcgt acgagatcag ctttcttgct gccttgagcg ctttatagag gtcaccgctt
     1261 aagatgcggt tattaacctc ggcaatcagc ggtagggaac tcggtgcagc ggacaagaaa
     1321 tcccggacta gtggaaagta gattcggttg tgcttggaca agtcctgttg aatgtacatt
     1381 aactgaacgg ccaggtagat ttttttggcc ggcgtatccg ccgaatcaac ggtcaggata
     1441 tccttctcac gcaggatcgg agcgtcgcct tcgatgaaga accgggtgcg ctggtcgccg
     1501 ttgcgaatca cggcggtgcc gatgatcagg cgctcgttcg gcttcagttc gactttcagg
     1561 ctcatcgtgt gctccccttc tgggttcagc ggtggtttgg ccgggcctag ccgaacagcc
     1621 tcaggactgc ctgctgcgcc tgggcggcga gcgacagggc cgtctgcgag agctgctggc
     1681 gggtgttgag cgccaggagg ttggcgccct cctcgttggc gtcggcaagg gtcagtttgt
     1741 cggccccgat ctccagggtg ttgatcatcg tcttggtgaa ttcctcgcgg atctgcacca
     1801 tcgtcaggcc ggagccgaac gaggccgatt gcgtctgcag ctcggtgagc gcggcgccca
     1861 gctcgtcgta acgggcgtcg agcagggcgt cggtggagaa ttcgtccgaa gtggccactc
     1921 cgatgtcgag cgattcgggg ctcgtgttga tcgggcggac cacgccattg gtatccttgg
     1981 cctggatctc gatggcactg gtgttgatct cgttgaaggt gatcttcagc ttgtccgcct
     2041 tgagcaggtt gacgccgttg tagctggcgt cgtcggacag cttgtcgagc tggcggcgca
     2101 gctcgttgaa ctgctcgatc aggctcttgc ggacctcgtt gccggcaatg gtctgcgtgt
     2161 tggtggcgcc gacgctgccc gtgatctgcg tcgaggtggc gccgaccatg gtcaaggctt
     2221 cgacggagag attctcgatg cgcagcttgc cgccgtcgtt atgggccctg atcttgccgg
     2281 tgagggcggg gttggtgttg atcgaggtga ccatctggtc gaccgttttc acggagccgg
     2341 gcgtggtcgg ggccgtgccg atgctcgggg cagcgaacag ggccgaatcg gcgccggtga
     2401 cggcgagtgc ggaagcgccg tggctcttcg cccggaactg caggttggcg ccgttggcgt
     2461 aagcctcgaa ggggtggccg ggcccgaggt cggcattggc ctttgcaacc gcgagcgaga
     2521 cgttcgtctc gctcgtggtc agggccaccg gggtgccgtt gatcgagatg ttggtctggc
     2581 cgttggagcc ggtcacgctc gcgggagcgg cgccgacgag cgccgtggcg ctgccggcgg
     2641 tgccgttgtc ggtgacggtg atgggcccgt cctccgggtt gatcgtctcg agccgcagga
     2701 agttgctggc gtcgagggtc gccgtgacgc gcccgttgag cccggagttg gcgatcgccg
     2761 cctggatctg cgccagcgcc gcggacctgt tcgagccgtt cgccaaggtg acgtcggcgg
     2821 tgatcccggc gaacgcgatt cgcacgtcga cctgctgggc gaaggtgccg gcgttcaggg
     2881 cgacggttcc cgtcaggctc gccttctgcg cagtgctcgg cggtgcgtag ggagcgcttg
     2941 tctgcgccgt cgtgcggctg ccgccgatat cggcgatatt gagcggcacg ttgaccggcg
     3001 tgacgccgac gccgccgccc gagaatgtca gatacgccga tgcggccgtg ccgatgccgg
     3061 cgctctcctg ggcgtaggtc acgcccttga acgacttgtc ctgacgcgtc tgccggacgt
     3121 tggcctgcat cgtctcgacg gtcttgacga tcattttcat ggcgttgtcg gccgcttcga
     3181 gggtcttgac cccctgcgac atgccgtcga gcagcaagct gaggtcgttc gagcggcggt
     3241 tcagcccggc tgccgtgaag aaattcgtgg gattgtcgat ggcagaattg accttcctgc
     3301 cggacgaaag acgctcctgg aacttaccct gcagctcggt cgtcttctgc aaggtcagaa
     3361 gattctgccg gatggcgccc gtaaggacga cttcgttgga cataggaacg atcccattct
     3421 gggtcggggc ctcaggcctc gcctcggcgg agaatggatc gttaagccta acgaagtgtt
     3481 aatggcgcaa aatgacctaa aacggcactg tcgccgctct aggttccggt ctttcaggat
     3541 caggagggaa cggtggggcg ttcggcccca ccgttcccga ttgaagttcc ggattagaac
     3601 aaccggagca cggcctggtc ggcctgcgag gccagcgaca aggcggtctg cgacagctgc
     3661 tggcgggtgt tgagcgccag aagcttcgag gcttcctcgt tcgcgtccgc gaggacgaga
     3721 gcgtccgcgc cggtctgcag cgtgttgatc atcgacttgg tgaactcctg acggttctgc
     3781 accgtcgtga gcgccgagcc gaactcagac gactgcgcct ggatcgtgtt gagagacgcc
     3841 gacagcttgt cgagacgggc gtcgagagcg gcgtcgtccg cgaactcggc cgaggtggcc
     3901 tcgccgatgt ccagcgagtt cgcatccgtg ctgatgccgc gcaccgtgcc ggacgtgctc
     3961 ttggcctgga tctcgatgtt gctggagccg gtctcgttga aggagacctt cagcttgtcg
     4021 gccttcacca ggttgacacc gttgtaggtg gcgtcacccg ccagcttgtc gagctgcttg
     4081 cgcaggtcgt tgaactggcc gatcaggttc ttacggacct cgttgccggc gatcttctgc
     4141 gtgttggcgg cgccgctctg
//
LOCUS       DATAIQ010000647         1828 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_33708, whole genome shotgun sequence.
ACCESSION   DATAIQ010000647 DATAIQ010000000
VERSION     DATAIQ010000647.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1828)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1828)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1828
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_33708"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(78..1268)
                     /gene="tuf"
                     /locus_tag="VHN20_10770"
     CDS             complement(78..1268)
                     /gene="tuf"
                     /locus_tag="VHN20_10770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008963462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HEX2726292.1"
                     /translation="MAKEKFARTKPHCNIGTIGHVDHGKTSLTAAITKVLAETGKAQF
                     TAYDQIDKAPEEKARGITISTAHVEYETDKRHYAHVDCPGHADYVKNMITGAAQMDGA
                     ILVVSAADGPMPQTREHILLARQVGVPALVVFLNKVDMVDDPELLDLVELEVRELLSK
                     YDFPGDDIPIVKGSALMALEEKSPEIGKNAILELMTKVDDYIPQPERPIDQPFLMPIE
                     DVFSISGRGTVVTGRVERGIVKVGEEVEIVGLRDTQKTTVTGVEMFRKLLDQGQAGDN
                     VGVLLRGTKREDVERGQVVCKPGSVKPHTKFKAEAYILTKEEGGRHTPFFTNYRPQFY
                     FRTTDVTGVVTLPEGTEMVMPGDNVTMDVTLIVPIAMEEKLRFAIREGGRTVGAGVVA
                     QVVE"
     gene            complement(1326..1640)
                     /locus_tag="VHN20_10775"
     CDS             complement(1326..1640)
                     /locus_tag="VHN20_10775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726293.1"
                     /translation="MERHLVGELNGARPVRIEVAIKDVQIASVVQRILIGGSHHMMGD
                     VNVVDAKTGQVLVAYPAQTAVGAAGQGLLGTMIDQAAFAEPIDRVVENYASQYGNWLL
                     RK"
BASE COUNT          299 a          626 c          548 g          355 t
ORIGIN      
        1 cttgtcccgg tgatcccgat ccgcgcctat cggatcgggg atggccgggc cgggcccggc
       61 catgacggtt gaggttgtta ctcgaccacc tgggcgacga cgccggcgcc gaccgtgcgg
      121 ccgccctcgc ggatggcgaa gcgcagcttc tcctccatgg cgatcggcac gatcagggtc
      181 acgtccatgg tgacgttgtc gcccggcatc accatctcgg tgccttccgg cagcgtcacc
      241 accccggtca cgtccgtcgt ccggaagtag aattgcggac ggtagttggt gaagaacggc
      301 gtgtgccggc cgccctcttc cttggtcagg atataggcct cggccttgaa cttggtatgc
      361 ggcttcaccg agccgggctt gcacaccacc tggccgcgct caacgtcctc gcgcttggtg
      421 ccgcgcagca gcacgccgac gttgtcgcca gcctgcccct ggtcgagcag cttgcggaac
      481 atctcgacgc ccgtcaccgt cgtcttctgc gtgtcgcgca ggccgacgat ctcgacctcc
      541 tcgccgacct tgacgatgcc gcgctcgacc cgcccggtca ccaccgtgcc gcggcccgaa
      601 atcgagaaca cgtcctcgat cggcatcagg aacggctggt cgatcggacg ctccggctgc
      661 ggaatgtagt cgtcgacctt cgtcatcagc tccagaatgg cgttcttgcc gatctccggg
      721 ctcttctcct cgagcgccat cagcgccgag cccttgacga tcgggatgtc gtcgcccggg
      781 aagtcatact tggacagaag ctcgcggacc tcgagttcga ccaggtcgag aagctccgga
      841 tcgtcgacca tgtcgacctt gttcaaaaac acaaccagcg ccggaacgcc gacctgacgc
      901 gccagaagaa tgtgctcgcg cgtctgcggc atcggaccgt cggccgccga cacaaccagg
      961 atcgccccgt ccatctgggc cgcacccgtg atcatgttct tcacatagtc ggcatgccca
     1021 gggcagtcga catgcgcgta atggcgcttg tccgtctcat actccacatg cgccgtcgaa
     1081 atcgtgatgc cgcgcgcctt ctcctcggga gccttgtcga tctggtcata ggccgtgaac
     1141 tgcgccttgc ccgtctccgc caaaaccttc gtgatcgccg cagtcagcga cgtcttgcca
     1201 tggtcaacgt gaccaatcgt tccgatgttg cagtgcggct tcgtccgcgc aaatttttcc
     1261 ttggccatgt atcaccccgg cagtgctgga aacgctttgt cggggggtcc gatagggccg
     1321 ttgggttatt tccgcaagag ccaattgccg tattggctgg cgtaattctc gacgacgcga
     1381 tcgatcggct cggcaaacgc ggcttggtcg atcatcgtgc cgagcaggcc ttggccggcg
     1441 gcgcccaccg cggtctgggc cggataggcc accaggacct gcccggtctt ggcatcgacc
     1501 acgttgacgt cgcccatcat gtgatgactg ccgccaatca ggatgcgctg gaccaccgac
     1561 gcgatctgca cgtccttgat cgcgacctcg atgcgcaccg gccgcgcgcc gttcaactcg
     1621 cccacgaggt gacgctccat cgcggccttc accttcgcgg caatggtcgt gcgcagataa
     1681 gcgcgacctt ccggggtgtt cgcgacagtc tcagagtcgt gggtccccac cagatgcgcg
     1741 cattcggctc gaaatccacc ttcacgcccg ccaggcgaaa gttcgccacc tgatcgggcg
     1801 agaggttgtt agaggcggtg acacagcc
//
LOCUS       DATAIQ010000648         2054 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_311075, whole genome shotgun sequence.
ACCESSION   DATAIQ010000648 DATAIQ010000000
VERSION     DATAIQ010000648.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2054
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_311075"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..549
                     /locus_tag="VHN20_10780"
     CDS             <1..549
                     /locus_tag="VHN20_10780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018387370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family metallopeptidase"
                     /protein_id="HEX2726294.1"
                     /translation="ASVFGEMLTFRRLLDTTTNAKQRKAMLAAKVEDMINTVVRQIAF
                     YSYERKIHVERRNGELTADKLCELWMSVQGESLGPSIRLGPGYETFWTYIPHFVHSPF
                     YVYAYAFGDCLVNSLYGVYEQAHEGFVERYFALLSAGGTRHHTELLAPFGLDARDPAF
                     WQIGLSMIERLIGELEAMETEA"
     gene            complement(601..855)
                     /locus_tag="VHN20_10785"
     CDS             complement(601..855)
                     /locus_tag="VHN20_10785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726295.1"
                     /translation="MYHNWFLLSIFGIGFPLVYAWLALPVVVRAVQTGELEIRGRSYA
                     RAQAPLHFWLGLAFGLFVLVVAAGSALAVATVIISRLVSG"
     gene            1056..>2054
                     /locus_tag="VHN20_10790"
     CDS             1056..>2054
                     /locus_tag="VHN20_10790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010682606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AarF/UbiB family protein"
                     /protein_id="HEX2726296.1"
                     /translation="MPDNDREANRFSARAARYARVGTNVGGVAARIAGTRLFGFEGQD
                     ASNAAALAQVLGGLKGPIMKVAQLLATIPDLVPPEYAAELQKLQSEAPPMGGAFVRRR
                     MLAELGSDWQARFGSFDLKPAAAASLGQVHRATAKDGSPLACKLQYPDMQSAVEADLR
                     QLEFVFAIHRRMDPAIDTTEIAKEIGARVREELDYEREARHVRLYQQALAEVPEVRVP
                     SLWPELSTRRLLTLGWLDGTKILQFTEATPEIRNRLAVAMFKAWWHPFSHIAVIHGDP
                     HLGNYTVFSEGGEARGINLLDYGCIRIFPPSFVGGVVDLYHGLLHDDRDRIVHAYEV"
BASE COUNT          347 a          715 c          683 g          309 t
ORIGIN      
        1 gcgagcgtgt tcggcgagat gctgaccttc cgccgtctgc tcgacacgac cacgaatgcg
       61 aagcagcgca aggcgatgct tgccgccaag gtcgaggaca tgatcaacac ggtcgtgcgc
      121 cagatcgcgt tctactcgta cgagcgcaag atccatgtcg agcggcgcaa cggggaactc
      181 acggccgaca agctctgcga gctttggatg tcggtgcagg gcgaaagcct cggcccctcg
      241 atccgtctcg gccccggcta cgagaccttc tggacctaca tcccgcattt cgtgcactcg
      301 ccattctacg tctacgccta cgcgttcggc gactgcctgg tgaactccct ctacggcgtc
      361 tacgagcagg cccacgaggg tttcgtcgag cgctatttcg cgctgctctc ggccggcggc
      421 acgcggcacc ataccgagct gctcgccccc ttcggcctcg acgcccgcga cccggctttc
      481 tggcagatcg gcctgtcgat gatcgagcgc ctgatcggcg agctcgaggc gatggagacg
      541 gaagcgtaat cagccgcttt cggcgagacc ggacccgccg agagatgcca gccgtttgcg
      601 tcagcccgat acgaggcggg aaatgatgac ggtcgcgacg gcgagggcgc tgccggcggc
      661 gacgaccagg acgaacagcc cgaaggcgag cccgagccag aagtgcaggg gcgcctgcgc
      721 gcgggcgtac gagcgtcccc ggatttcgag ctcgcccgtc tgcacggccc ggaccacgac
      781 cgggagcgca agccaggcgt agaccaacgg gaagccgatc ccgaaaatgc tcagcagaaa
      841 ccagttgtgg tacacgtctc aatctctcga acaggtgcgg ccagaatggc tccggttccc
      901 gggaacccgc cgacgacgac atccgctgac accatcgtcg acggcttcgg tcgcgggctc
      961 ccgaacctct tgccccgcga ccgcgttcgt gggcgagggg ctggcgccgg tggcgggcgc
     1021 gcctatgtaa cggttgagcc cacctgatcc aagccatgcc cgacaacgac cgcgaagcca
     1081 accgcttctc cgcccgcgcg gcccgttacg cgcgcgtcgg caccaatgtc ggcggcgtcg
     1141 cggcgcgcat cgccggcacg cgcctgttcg gcttcgaggg ccaggacgca tccaacgcgg
     1201 cggcgctggc gcaggtgctc ggcggcctca aaggcccgat catgaaggtg gcgcaactcc
     1261 tcgccaccat tcccgacctc gtgccgccgg aatacgccgc cgagctgcag aagctgcagt
     1321 cggaagcgcc gccgatgggc ggggcgttcg tgcggcggcg catgctggcg gagctggggt
     1381 ccgactggca ggcgcgcttc ggatccttcg acctcaagcc ggcggcggcc gcgtccctcg
     1441 ggcaagtgca ccgcgccacc gccaaagacg ggtcgccgct cgcctgcaag ctgcaatacc
     1501 cggacatgca gtcggccgtc gaggccgatc tgcggcagct cgaattcgtg ttcgccatcc
     1561 accggcgcat ggatccggcc atcgacacga ccgagatcgc caaggagatc ggcgcgcgcg
     1621 tgcgcgagga gctcgattac gagcgcgagg cgcggcacgt gcgcctctac cagcaggcgc
     1681 tggccgaagt gcccgaggtg cgggtgccgt cgctgtggcc ggagctgtcg acgcggcgcc
     1741 tgctcacgct cggatggctg gacggcacca agatcctgca gttcacggag gccacgcccg
     1801 aaatccgcaa ccgcctggcc gtggccatgt tcaaggcatg gtggcatccg ttcagccaca
     1861 tcgcggtcat ccatggggac ccgcacctcg gcaactacac ggtgttttcc gagggcggcg
     1921 aggcgagggg gatcaacctg ctcgactacg gctgcatccg gatcttcccg ccgagcttcg
     1981 tcggcggcgt cgtcgacctc tatcacggcc tgctgcacga cgaccgcgac cgcatcgtgc
     2041 acgcctacga ggtg
//
LOCUS       DATAIQ010000649         2788 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_246383, whole genome shotgun sequence.
ACCESSION   DATAIQ010000649 DATAIQ010000000
VERSION     DATAIQ010000649.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2788)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2788)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2788
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_246383"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            130..333
                     /locus_tag="VHN20_10795"
     CDS             130..333
                     /locus_tag="VHN20_10795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726297.1"
                     /translation="MMPALEPILRWIMIAFVAVAIGGFLWLLGISWLHDRRARRERER
                     LARPRVRTTVEERYRNTGGQAHG"
     gene            326..1111
                     /locus_tag="VHN20_10800"
     CDS             326..1111
                     /locus_tag="VHN20_10800"
                     /inference="COORDINATES: protein motif:HMM:NF016302.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ERF family protein"
                     /protein_id="HEX2726298.1"
                     /translation="MAEKRQEIITRDEAPPLAEPQGPSVGSVLQLIERAATDERVDVE
                     KMERLLAMQERILAIQAKRDAMQAKQVMMAEMPRVSRHGEIIIAERGTRRVIQRTRYA
                     KWEDIDAAIRPILSKHGFVLSFRSSEGSDGKILMTAVLTHQGPAGTYEETSTLPIPPD
                     PSGSKNAIQALGSSLSYGKRYTATPLLNLVFEGEDDDGNGGRHQAPETINDLQVLDIE
                     NALKKADADPALFLRAFEIEKVEDLPRERFEEAMQRITGRRRR"
     gene            1108..1749
                     /locus_tag="VHN20_10805"
     CDS             1108..1749
                     /locus_tag="VHN20_10805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014529804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqaJ viral recombinase family protein"
                     /protein_id="HEX2726299.1"
                     /translation="MKIFTCEQGSIDWYQARAGMPTASHFKDLFIGPRGGQANRRTYM
                     LRLAGEILTGEPMEQIWNGHMERGRIMENEARNFYALDIGMEPERVGFIRNDRASGPV
                     GCSPDSLVGSDGALEIKTAMPHILLEAILKDAPPAEHVAQCQGILWVAEREWIDLSIY
                     WPRLPPFVKRLHRDQDFIDSLVVAVDAFNEELQEIVERVRRYGRDDCADMEAA"
     gene            1761..2180
                     /locus_tag="VHN20_10810"
     CDS             1761..2180
                     /locus_tag="VHN20_10810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726300.1"
                     /translation="MLIRAIMGVNKGDELRDRFVKDMGATDWDAPWPLPNARPSSETE
                     FWGWLTTWGPRAYAWTGQRKIGDDFANVLVFYMDVMDMQNGGFAIVVFRRYQQERVEY
                     FRWGACQHEFENKTIGNCLHRYTCKKCGATHDVDSSG"
     gene            2207..2455
                     /locus_tag="VHN20_10815"
     CDS             2207..2455
                     /locus_tag="VHN20_10815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726301.1"
                     /translation="MTTNGARHTMTLPSGLTIMRPTPSYVYPMDGRPEVKPISELSEA
                     DREAYAAALRAAVMGVGETPKERSHANGSSRDSAQAGA"
     gene            2412..>2788
                     /locus_tag="VHN20_10820"
     CDS             2412..>2788
                     /locus_tag="VHN20_10820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726302.1"
                     /translation="MQTVAVEIPRKQARELYREYKKHVHYSQPMDREIMRAYQLMAQG
                     RVIIKALESIRKAGVNDQALPKLAICRADQQVCTLQIPYGGAACSFHAGEVPRFHNAS
                     RAFGNQFVFRDWPEIIGWTNRKDR"
BASE COUNT          535 a          915 c          933 g          405 t
ORIGIN      
        1 gcgcgagggt cccggcacgc tcgccgagat cgctacgccg ggcgcgctcg tgctgagcgg
       61 ccacactcct gtcgtctacg tcaagggcaa gggctgcgtc gcgctcaccc atgtggccga
      121 gccgcagcca tgatgcccgc cctcgaaccc atcctccgct ggatcatgat cgccttcgtc
      181 gcggtcgcga tcggcggctt cctctggctg ctcggcatct cctggctgca cgaccggcgg
      241 gcgcggcgcg agcgcgagcg gctggcgcgg ccgcgggtga ggacgacggt ggaggaacgc
      301 taccgcaaca cgggaggaca ggcacatggc tgagaaacgc caggagatca tcacgcgcga
      361 cgaggccccg ccgcttgccg agccgcaagg cccgagcgtc ggttcggtgc tgcagctgat
      421 cgagcgcgcc gccacggacg agcgcgtcga cgtcgagaag atggagcgcc tgctcgcaat
      481 gcaggagcgc atcctcgcca tccaggccaa gcgcgacgcg atgcaggcga aacaggtgat
      541 gatggccgag atgccgcgcg tcagccggca cggcgagatc atcattgccg agcgcggcac
      601 gcgccgcgtc atccagcgca cccgctacgc caagtgggag gacatcgacg ccgcaatccg
      661 gccgatcctt tccaaacacg gcttcgtgct gtcgttccgc agctccgagg gcagcgacgg
      721 caaaatcctt atgacagcgg tcctgaccca tcagggcccg gccggcacct atgaggagac
      781 ctcgacgctg ccgatcccgc ccgacccgtc gggctccaag aacgcgatac aggcgctcgg
      841 ctcgtccctg tcctacggca agcgctacac ggcgacgccg ctgctcaacc tcgttttcga
      901 gggcgaggac gacgacggca acgggggccg ccaccaagcg cccgagacta tcaacgacct
      961 gcaggtgctc gacatcgaga atgcgctcaa gaaggccgac gccgacccgg cgctgttcct
     1021 gcgcgccttc gagatcgaga aggtggagga cctgcccagg gagcggttcg aagaggccat
     1081 gcagcgcata acggggcgga ggcggcggtg aaaatcttca cctgcgagca gggctcaatc
     1141 gactggtatc aggcgcgcgc cggcatgccg accgcctcgc atttcaagga cctgttcatc
     1201 ggcccgcgcg gcggccaggc gaaccgccgc acctacatgc tcaggctggc gggcgagatc
     1261 ctgaccggcg agccgatgga gcagatatgg aacggccaca tggagcgcgg ccgcatcatg
     1321 gagaacgagg cgcgcaactt ctatgccctc gacatcggca tggagcccga gcgcgtcggc
     1381 ttcatccgca acgaccgcgc ctccgggccg gtcggctgca gccccgactc gctggtcggc
     1441 agcgacggcg cgctcgagat caagacggca atgccgcaca tcctgcttga ggccatcctg
     1501 aaggacgcgc cgcctgccga gcacgttgcg caatgccagg gcatcctgtg ggtggccgag
     1561 cgcgagtgga tcgacctttc gatctactgg ccgcgcctgc cgcccttcgt gaagcggctg
     1621 caccgcgacc aggacttcat cgacagcctt gtcgtggccg tcgacgcctt caacgaggaa
     1681 ctgcaggaga tcgtcgagcg cgtgcgccgc tatgggcgcg acgactgcgc agacatggaa
     1741 gcggcttgag gaggagaacg atgctgatcc gggcgatcat gggtgtcaac aagggggacg
     1801 agcttcgcga ccgtttcgtg aaagacatgg gcgcgaccga ctgggacgcc ccttggcccc
     1861 tgccgaacgc aaggccgtca tccgagacgg agttctgggg ctggctgacc acatggggcc
     1921 cgcgcgccta cgcgtggacc ggccagcgca agatcggcga cgatttcgcc aacgtgctcg
     1981 tgttctacat ggacgtgatg gacatgcaga acggcggctt cgccatcgtc gtgttccggc
     2041 gatatcagca ggagcgcgtc gagtatttcc gctggggcgc gtgccagcac gaattcgaaa
     2101 acaagaccat cggtaactgt ctgcaccgct acacctgcaa gaaatgcggc gcgacacacg
     2161 atgtcgattc cagcggctga gaaccaccac acagatgcgg ggcaccatga ccaccaacgg
     2221 agcacgacac acgatgacgc taccctccgg cctcacgatc atgcggccga cgccgtccta
     2281 cgtctatccg atggacggcc ggcccgaggt caagccgatc tcggagctgt ccgaggccga
     2341 ccgcgaggcc tacgcggcgg cgctgcgggc ggcggtgatg ggggtggggg agacaccaaa
     2401 ggagagaagc catgcaaacg gtagcagtcg agattccgcg caagcaggcg cgtgagcttt
     2461 accgcgaata caagaagcac gttcactact cgcagccgat ggaccgcgag atcatgcgcg
     2521 cctaccagct gatggcgcag gggcgggtaa tcatcaaggc gctggagagc atcaggaagg
     2581 cgggcgtgaa cgatcaggcc ttgccgaagc tggcgatctg ccgcgcagac cagcaggtct
     2641 gcacgctgca aattccctac ggtggtgccg cctgctcttt ccacgcgggc gaggttccgc
     2701 gctttcacaa cgcgagccgc gcgttcggca atcagttcgt gttccgcgac tggccggaga
     2761 tcatcgggtg gaccaatcgg aaggatcg
//
LOCUS       DATAIQ010000650         3311 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_311200, whole genome shotgun sequence.
ACCESSION   DATAIQ010000650 DATAIQ010000000
VERSION     DATAIQ010000650.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3311)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3311)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3311
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_311200"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1573)
                     /locus_tag="VHN20_10825"
     CDS             complement(<1..1573)
                     /locus_tag="VHN20_10825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HEX2726303.1"
                     /translation="MDLKERLVFACSCEDTMPLDEAALAKGCGGELRTARQLCRAQLD
                     AFRNAVATGRPVTVGCTQEAPLFGEVAGDVGAEERVLYANIRENGGWSKDAAAAGPKM
                     AALLAAAAEPTPPIALVPLESKGVTLIYGRDEVAIDVARRLADHLDLTVLLTRPGDVA
                     PPRATAFPVVQGTITAAKGHLGAFELRIDDYALPVPSSRHRFAFGPARDGATSTCDVV
                     LDLSGGVPLFPAHELRSGYLRADPRDPAAVERLLFEAANLVGTFDKPKFITFHEGLCA
                     HSRSRITGCTRCLELCPTGAITPAGDTVAIDPHVCAGCGACAAACPTGAAAYALPPAD
                     ALLRRLRTLILAYAHAGGTDPVILLHDQDHGAPLIDALARFGDGLPANVLPVLVNEVT
                     QVGPEALAAVFAYGATGVRILARARPKHDRTGLSRIVATLDTVLEGLGYGTRLVSAIE
                     TDDPDQLRAALDRAPSGRAVAHPATFLPTGAKRGLLELAFRELHRAAPAPVDVVPLAA
                     GAPFGGLDYNAEACTL"
     gene            1758..2510
                     /locus_tag="VHN20_10830"
     CDS             1758..2510
                     /locus_tag="VHN20_10830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014491714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoate--protein ligase family protein"
                     /protein_id="HEX2726304.1"
                     /translation="MAALAAKTERAPLDLPPPYTLVTLREAGDAFAHACGVADEMGAG
                     TLVWVRRFDLVEFAVVLEPEETLASARRAFFCCMAALADAIAVHCLPETEVVFEWPDA
                     IRLNGARIGGARLGWPAPCADEETPGWLVFGAMLTAAWTGGIEPGLRPAVTSLEEEGF
                     DSEQGQALIESFSRYLMRAFDTWSAKGFGPIADQYLARLEVRKAGERRGIDGNGDLLI
                     RRHGREDVERQALVPALREAVWLDRCSGMPKA"
     gene            2538..3098
                     /locus_tag="VHN20_10835"
     CDS             2538..3098
                     /locus_tag="VHN20_10835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018044807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6505 family protein"
                     /protein_id="HEX2726305.1"
                     /translation="MALKLPRTIRLDPSDTLVFERPADPGEWAVSGSFLFWDTELAAL
                     AGKARAAFRAGFVGVRSLGFSTLVVVTVALPEERDAAIAELATHIRDKFGAPDWEAAC
                     AAAREEVDFASSLCQHDVNTILAMHRTVEGGEIREQFRALTLREAAPGDRLHAHARAF
                     EFIEVEGEPEPGERIDLVGLADRKPA"
     gene            3095..>3311
                     /locus_tag="VHN20_10840"
     CDS             3095..>3311
                     /locus_tag="VHN20_10840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003601748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6352 family protein"
                     /protein_id="HEX2726306.1"
                     /translation="MREFWVSSGHHLTQRTDGGGLAVTDELLLAYLARPELLPPDEAC
                     AAERALHGSLLAQPRRPVPLGEVAAIAD"
BASE COUNT          503 a         1095 c         1218 g          495 t
ORIGIN      
        1 agagcgtgca ggcctcggca ttgtagtcga gcccaccgaa tggcgcgcca gcggcgagcg
       61 ggacaacgtc gacgggcgcg ggagcggcac gatgcagctc gcggaaggcg agctcgagaa
      121 ggccgcgctt agcgcccgtg ggcaagaacg tcgccggatg agcgacggcg cggccggacg
      181 gcgcccggtc gagagcggcg cgaagctggt ccgggtcgtc ggtctcgatg gccgatacga
      241 gccgcgtccc gtagccgagc ccttcgagaa cggtgtcgag agttgcgacg atgcgagaga
      301 gcccggtcct gtcgtgcttc ggccgggcgc gggcgaggat ccgcacgccg gtcgcgccgt
      361 aggcgaacac ggcggcgagc gcttcgggcc cgacctgcgt cacctcattg acgagcaccg
      421 gcaggacgtt ggcaggcagc ccgtcgccga agcgggcgag ggcgtcgatc aagggcgcgc
      481 cgtgatcctg gtcgtggagc aggatgaccg ggtcggtgcc gcccgcatgc gcataggcga
      541 ggatcaaggt gcgcagccgg cgcagcagcg catcggcggg cggcagcgcg taggcggcgg
      601 cgccggtcgg gcaggcggcc gcgcaagctc cgcagcccgc gcatacgtgc gggtcgatgg
      661 cgacggtgtc gccggccggc gtgatggcgc cggtcgggca gagctcgagg cagcgcgtgc
      721 agccggtgat gcgcgagcgc gaatgggcgc acagcccttc gtgaaaggtg atgaatttcg
      781 gcttgtcgaa ggtcccgacg aggttggcgg cctcgaacag gaggcgctcg accgccgccg
      841 gatcgcgcgg gtcggcgcgc aaatagccgc ttcggagctc gtgggcgggg aaaagcggca
      901 cgccgcctga aaggtccagg acgacgtcgc aggtcgaggt cgcgccatca cgcgccggtc
      961 cgaaagcgaa tctgtgccgg gacgagggaa ccgggagggc ataatcatcg atgcgaagct
     1021 cgaacgcgcc gagatggccc ttggccgccg tgatcgtgcc ctgcacgacc ggaaacgccg
     1081 tcgcgcgcgg gggcgctacg tccccgggcc tggtcagcag cacggtcagg tcgagatggt
     1141 cggcaagacg tcgcgcaacg tcgatcgcaa cctcatcgcg gccatagatc agcgtgacgc
     1201 ccttcgattc taacgggacg agtgcgatcg gcggggtcgg ctcggcggcg gctgcgagca
     1261 gggcggccat cttcggtccg gcggctgcgg catctttcga ccagccgcca ttttcgcgga
     1321 tgttggcgta taggacccgc tcctcggcac ccacgtcgcc ggcgacctcg ccaaacagcg
     1381 gcgcctcctg cgtgcagccg acggtaacgg gccggcctgt cgcgacggca ttccggaacg
     1441 cgtcgagctg cgcccggcac agctggcgcg cggtgcgcaa ctcgccgccg caccctttgg
     1501 cgagagccgc ctcgtcgagc ggcatcgtgt cctcgcagga gcaggcgaag acgaggcgtt
     1561 ccttcaagtc catcacatcg tcccgcccaa gtcgggtgtt cccgacttgg gcaacccttt
     1621 ttcgcggacc tcggacagcc cgagatccgg acgggggcgt tttgacgcct ctcgcgctta
     1681 tccttacgtc ccttatactg gaaataatct aaacaacgac tctgacctcg ggtcgcaggg
     1741 agacgtgctt cacgaacatg gccgcgcttg ccgctaaaac cgaacgcgcc ccgctcgatc
     1801 taccgccgcc ttacaccctg gtcaccttgc gggaagccgg cgacgccttc gcccatgcct
     1861 gcggggtcgc cgacgagatg ggcgccggca cgctcgtctg ggtgaggcgc ttcgatctcg
     1921 tcgagttcgc cgtggtgctc gagccggagg aaacgctcgc ctccgcccgc cgggcgtttt
     1981 tttgctgcat ggcagcgctg gcggacgcga tcgccgtgca ttgcctgccc gagaccgagg
     2041 ttgtcttcga atggccggat gccatccggc tcaacggcgc acgcatcggc ggcgcgcggc
     2101 tgggctggcc ggctccctgt gcggacgagg agacccccgg ctggctcgtg ttcggcgcca
     2161 tgctcacggc ggcatggacc ggcggcatcg agccgggatt gcggccggcg gtgacctcgc
     2221 tcgaggagga gggcttcgac agcgagcaag gacaggcgct gatcgagagc ttctccaggt
     2281 atttgatgcg cgccttcgat acctggtcgg caaagggttt cgggccgatt gcagaccagt
     2341 atctggcgcg gctcgaggtg cggaaggcgg gcgagcgccg cggcatcgac ggcaacggcg
     2401 acctcctgat tcgccgtcac ggacgcgagg atgtcgagcg gcaagcgctc gtgccggcgc
     2461 tccgcgaagc ggtctggctc gatcgctgca gcggcatgcc gaaagcatga tgcggggccc
     2521 gacatggcgt tgacgacatg gcattgaagc tgccgcgcac gatccgcctg gatccctccg
     2581 acacgctcgt gttcgagcgg ccggccgatc cgggcgagtg ggccgtgagc ggctcgttcc
     2641 tgttctggga cacggaactt gcggcgctcg ccggcaaggc gcgcgcggcg ttccgggccg
     2701 gcttcgtcgg cgtgcgctcg cttggctttt cgacgctcgt ggtcgtcacc gtggcgctgc
     2761 ccgaggagcg cgacgctgcc atcgcggagc tggcgacgca tatccgcgac aaattcggag
     2821 cccccgactg ggaggccgcg tgcgcggcgg cgcgcgagga ggtcgatttc gcctcgtcgc
     2881 tttgccagca cgatgtcaat acgatcctgg ccatgcaccg caccgtcgag ggcggcgaga
     2941 tccgcgagca gttccgcgcc ctgacccttc gcgaggccgc gccgggcgat cgcctgcatg
     3001 cgcacgcccg cgccttcgaa ttcatcgagg tggagggcga gccggagccc ggggagcgta
     3061 tcgacctggt cggcctcgcg gacaggaagc ccgcatgaga gagttctggg tctccagcgg
     3121 gcaccacctc acgcagcgga cggatggcgg cgggctcgcg gtcacggacg agcttctcct
     3181 cgcctatctg gcgcgaccgg aattgctgcc tcccgacgag gcgtgcgcag ccgagcgggc
     3241 gctgcacggg agcctgctgg cgcagccgcg acgccccgtg cccctgggcg aggtcgccgc
     3301 catcgccgat g
//
LOCUS       DATAIQ010000651         2831 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_34063, whole genome shotgun sequence.
ACCESSION   DATAIQ010000651 DATAIQ010000000
VERSION     DATAIQ010000651.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2831)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2831)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2831
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_34063"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1104
                     /locus_tag="VHN20_10845"
     CDS             <1..1104
                     /locus_tag="VHN20_10845"
                     /inference="COORDINATES: protein motif:HMM:NF012573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005509 - calcium ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HEX2726307.1"
                     /translation="ISIDLARDAFRDVTIVLDRGDPAWSLVDLVRSPGSFWTEILSGN
                     DELRTAGSVVFGDELRLEARTLVAGRDSVHGAGTLIGDVDTMSEAQLTGGNDIVHETA
                     GRGGTLIGDVRLCLDSGTPSDPVVGGDDVVSGGSGADTIIGDIARLVGSIAQGEADRI
                     SGYSGNDVLIGDFDRIESSASNDSAGLGCDDVVHGHDGNDTIYGDWRFVDGTSEAVGG
                     HDILYGDADDDTIFGDGPNSPFGGDDIISGGDGNDTLDGQGGDDLIIGGNGNDTIEGG
                     ADDDELAGGAGDDLFVFRAGSDGAVINDFKVAGADRIDLSNTVFDFQHIQDVYDQATT
                     VGTTTTIDLGGGDAVHLLNIADENTLVAADFIF"
     gene            1211..2068
                     /locus_tag="VHN20_10850"
     CDS             1211..2068
                     /locus_tag="VHN20_10850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726308.1"
                     /translation="MRAALLCLACTAGLSIAHGQQAGKPPDSWAGARRPLSAAEKYGP
                     YGSVGTITCRRPADAKRKEVYWHGTGQVTLAQDVVTTAAHNFIDPDTCKPFGPEWTCW
                     FRAPFRSYALDYSRSRFGWSLRPADWADQAAAPGRCKTEKSVFAKDDWAVLKLAEKVK
                     DAVPFAIDEMRKEEVIKTGAPLVMIAGYTPAFLKDGQETFSIEKCTQHGASPRGGTRE
                     LPLLLADCSGGQGTSGSGLYRLGSNGPGSERLIAIYHGPLILPARRIALYVPISGEFL
                     IQLKQVAGQ"
     gene            complement(2134..>2831)
                     /locus_tag="VHN20_10855"
     CDS             complement(2134..>2831)
                     /locus_tag="VHN20_10855"
                     /inference="COORDINATES: protein motif:HMM:NF015445.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HEX2726309.1"
                     /translation="ARRGVTNARATQELYETHLRDEFRDVHPICVWAHDHGLVHANRP
                     VRSLEDLRGLKLRSPTRQAGEALRLLGASAIGMPVPQVPEALTQRVIDGAVIPWEVIP
                     ALKVHELVRNHTEIPGTPTFYTATFVLAMNKARYDALPAELKAAIDKNSGQVAATMAG
                     AMWDEQAVVVSDLVRKRGNTIITLSEDEKARWRKTTEPVIEAWIRQVKERGLDGGKLL
                     DATRALVAKYDAA"
BASE COUNT          467 a          952 c          931 g          481 t
ORIGIN      
        1 atttccatcg acctcgcccg cgacgccttc cgcgacgtca ccatcgtcct cgatcgcggc
       61 gacccggcct ggtctctcgt cgatctcgtg cgcagcccgg gcagcttctg gaccgagatc
      121 ctgtccggca acgacgagct gcggacggcc gggtcggtcg tgttcggcga cgagctccgc
      181 ctcgaggccc gcacgctcgt ggccgggcgc gattcggtcc atggcgccgg caccctgatc
      241 ggcgacgtcg acaccatgag cgaggcgcag ctgaccggcg gcaacgacat tgtccacgag
      301 accgccgggc gcgggggaac cttgatcggc gacgtgcggc tctgcctcga cagcggcacg
      361 ccgtccgatc cggtcgtggg cggggacgac gtcgtgtcgg gaggaagcgg ggccgacacc
      421 atcatcggcg acatcgccag gctggtcggc tcgatcgccc aaggcgaagc ggaccggatc
      481 tcgggatatt cgggcaacga cgtcctgatc ggcgatttcg accgcatcga gagctccgcc
      541 agcaacgaca gcgccgggct cggctgtgac gacgtcgtcc acggccacga cggcaacgac
      601 acgatctatg gcgactggcg cttcgtcgac ggcacctccg aagctgtcgg cggccacgac
      661 atcctctatg gcgatgccga cgacgatacc attttcggcg acgggccgaa ctcgcccttc
      721 ggcggcgacg acatcatctc gggcggcgac ggcaacgaca cccttgacgg tcagggcggc
      781 gacgacctga tcatcggcgg caacggcaac gacaccatcg aaggcggcgc ggacgacgat
      841 gagctggccg gcggcgccgg cgacgacctg ttcgtgttca gggccggatc ggacggcgcc
      901 gtgatcaacg atttcaaggt cgctggcgcc gaccgcatcg acctcagcaa caccgtcttc
      961 gacttccagc acatccagga cgtctacgat caggcgacga cggtcggcac cacgaccacc
     1021 atcgacctcg gcggcggcga cgcggtgcac ctcctcaaca tcgcggacga gaacacgctg
     1081 gtcgccgcgg acttcatctt ttgagcggtt ccggcgtgaa ccctctcctc atctgcgcgc
     1141 gaggaccgcg aaggcgtacc ggcgggcgca gcgacccttg cgggtgagcg gccgggtctg
     1201 gatgagtctt ttgcgcgcag ctctgctgtg tctcgcctgc acagccggcc tgtcgatcgc
     1261 gcatggccag caagcgggca agccgcctga cagctgggcc ggcgcacgcc gccctttgtc
     1321 ggccgccgag aaatatgggc catacggctc ggtgggcacg atcacatgcc gaaggccggc
     1381 tgatgccaaa cggaaggaag tctactggca cggcacgggc caggtcacat tggcgcagga
     1441 tgtcgtcacc acggcagccc acaacttcat cgatcctgac acatgcaaac cctttggccc
     1501 tgaatggacg tgctggtttc gtgctccgtt ccgctcatat gccctcgatt actcgcggag
     1561 caggttcggc tggtctttgc gtccggctga ttgggccgat caggcagcgg cgccaggtcg
     1621 ttgcaagacg gaaaaatccg ttttcgcgaa agatgactgg gccgttctca agttggctga
     1681 gaaggtcaag gacgcggtgc cctttgctat cgatgagatg cgcaaggagg aggtgatcaa
     1741 aaccggtgct ccgctcgtga tgattgccgg atacacgccg gcctttctca aggacggcca
     1801 agaaacattt tccattgaga aatgcacgca gcacggcgcc agcccgcgcg gcggaacgcg
     1861 tgagctccct ctgctactcg ccgactgcag tggcggccaa ggtacgtcgg gatccgggct
     1921 gtatcgcctc ggttcaaacg gtcccggttc cgaacgtctg atcgcgatct atcatgggcc
     1981 gcttattttg cctgcacggc ggatcgcgct gtacgtcccg atcagcggag aattccttat
     2041 ccagctcaag caggttgcgg gccaataacg ggggcgtttc gtattgccag ttcacgatgg
     2101 cgccgaaccc gcgcgatcga cacaccagag gactcacgcc gcgtcgtatt tcgccaccag
     2161 cgcgcgggtc gcgtcgagca gcttgccgcc gtcgaggccg cgctccttga cctgcctgat
     2221 ccacgcctcg atgaccggct cggtggtctt gcgccagcgc gccttctcgt cctcgctcag
     2281 cgtgatgatc gtgttgccgc gcttcctgac gaggtcggac acgacgaccg cctgctcgtc
     2341 ccacatggcg cccgccatcg tcgccgcgac ctgcccggaa ttcttgtcga tcgccgcctt
     2401 cagctcggcc ggcagcgcgt cgtagcgcgc cttgttcatc gccagcacga aggtggccgt
     2461 gtagaaggtc ggcgtgcccg ggatctcggt gtgattgcgc acgagctcgt gcaccttgag
     2521 cgccgggatc acctcccacg ggatgacggc gccgtcgatg acgcgctgcg tcagcgcttc
     2581 cggcacctgc ggcaccggca tgccgatggc gctggcgccg agcaggcgca gcgcctcgcc
     2641 ggcctggcgc gtcggcgagc gcagcttcag gccgcgcagg tcctcgagcg agcgcaccgg
     2701 ccggttggca tggacgaggc cgtggtcatg cgcccacacg cagatcgggt gaacgtcgcg
     2761 gaactcgtcg cgcaggtgcg tctcatagag ctcctgggtg gcgcgtgcgt tggtcacgcc
     2821 gcggcgcgcc g
//
LOCUS       DATAIQ010000652         2981 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_200254, whole genome shotgun sequence.
ACCESSION   DATAIQ010000652 DATAIQ010000000
VERSION     DATAIQ010000652.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2981)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2981)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2981
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_200254"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1651)
                     /locus_tag="VHN20_10860"
     CDS             complement(<1..1651)
                     /locus_tag="VHN20_10860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726310.1"
                     /translation="MDRRGAIEEAIAALGGDPGFAAFVKGGAGVLVWSVDGDRLFWTS
                     PAAAPLRAVIAEHDGAVRPGFPARARLRALGQGLAPATGLRLERLRFDTGGLDAPVTC
                     ACRRITLSSGEEALLTAIAGSVPKVSAAVPPADIVDIGQAAPPEDERDPLARLQGRGT
                     VRFLWQTDASGRFIAHSDALAEVVGEAGAALTGRTWPEVVGDLVLDPSGRIADSFARR
                     ETWSGETVHWRIAGTDHAVAVDFAGMPSFDRARQFVGFRGFGLCRTDMLSGWPSSAPP
                     AASTPEAAQPDVEAVAPDPGAALAEVPHGLVEPVPPEPAGATAQVPHRLVEATEPAAT
                     AAEVPPGLVEPASPEPVAAVAEVPPGLVEPAPPAAIAAASELPAGFVREPDLPAASAT
                     DVHAVASAPSEPVGSIAEVLPGVVEPARSVSEDVAASLPAATAVPPSVPAAAPMSERS
                     RASDAAAQTARHAGEERPTPRAAVPITGLRAHVAAHLGATPVPLRPRDDPGSKRPEPA
                     PAANDHGDLAAAVQPPEPKRLPFLSSEERSAFREIARSLGAR"
     gene            1834..2301
                     /locus_tag="VHN20_10865"
     CDS             1834..2301
                     /locus_tag="VHN20_10865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phasin"
                     /protein_id="HEX2726311.1"
                     /translation="MAQQSTPYEVPPEMRDFAEKSVDQARKAFDGFMTAAQRTVDTLE
                     SSATSVQSNTKDLTQRTFEYAEQNVSAAFDLAQKLVRAKDVQEAMQLQAEYVRSQFAA
                     MQTQMKEFGSLAQSAAQTAAQATASQAREFGSMAQEAARSATEQPTRATKTKR"
     gene            complement(2398..2577)
                     /locus_tag="VHN20_10870"
     CDS             complement(2398..2577)
                     /locus_tag="VHN20_10870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726312.1"
                     /translation="MHVARRGGGLDRVMDDFSRSGADYLHERTYRVSGGYLVERTTRY
                     GSQYVLERTLRPQPW"
BASE COUNT          454 a         1046 c         1080 g          401 t
ORIGIN      
        1 aacgtgcccc gagggagcgg gcgatctcgc gaaacgcgct gcgttcctcg ctcgagagaa
       61 atggaaggcg cttcggctcg ggcggttgca cggcggccgc aaggtcgccg tggtcgttcg
      121 ccgccggggc cggttcgggc ctcttgctgc cggggtcgtc acgcggacgc agcggaaccg
      181 gcgtcgcccc gagatgcgcc gccacatgcg cgcgcaatcc ggtgatcgga acggcggcac
      241 gcggcgtcgg gcgctcctcc ccggcgtggc gcgcggtctg cgccgcggcg tcgcttgccc
      301 gggagcgctc ggacatcggt gcggcggcgg gaaccgaagg cggcacggca gttgcggccg
      361 ggagcgaagc agccacgtcc tcggacacgg atcgcgcggg ttcgacaacg ccggggagca
      421 cttccgcgat cgagccgacc ggctccgatg gggccgatgc gacggcatgc acatccgtcg
      481 cggaggctgc gggcaagtcc ggttcacgaa cgaagccggc cggcagctcc gacgcggcgg
      541 caatcgctgc gggcggggcc ggctcgacaa ggcccggcgg cacctccgct acggcggcca
      601 cgggttcggg cgaggccggc tcgacaagtc caggcggcac ctccgctgcg gtcgcagcgg
      661 gttcggtggc ctcgacaagg cgatgcggca cctgggccgt cgcgccggcg ggttcgggcg
      721 ggaccggttc gacgaggcca tgcggtacct cggccagcgc agcgccgggg tcgggcgcca
      781 cggcctcgac atcgggctgc gccgcctccg gagtggacgc cgccggtggt gccgacgatg
      841 gccagccgct gagcatgtcg gtgcggcaga gaccgaagcc gcggaagccg acgaactggc
      901 gggcgcggtc gaacgacggc atgccggcga agtcgacggc gacggcgtga tccgtgccgg
      961 cgatgcgcca atgcaccgtc tcgccgctcc aggtttcgcg gcgcgcgaac gagtcggcga
     1021 tccgcccgct cggatcgagc accagatcgc ccacgacttc gggccacgtg cggccggtca
     1081 gggccgcgcc ggcctcgccc accacctcgg ccagcgcatc cgaatgcgcg atgaaacggc
     1141 ccgatgcgtc cgtctgccaa aggaagcgca cggtgccacg cccttgcagg cgcgcgagcg
     1201 ggtcgcgttc gtcttcgggc ggcgctgcct ggccgatgtc gacaatgtcg gctggcggga
     1261 ctgcggcgct gaccttgggc acggaaccgg cgatggcggt cagcagggcc tcctcgcccg
     1321 aggacagcgt gatgcggcgg catgcgcatg tcaccggcgc gtcgagccca cccgtatcga
     1381 agcgcaggcg ctcgagccgc agccccgttg cgggcgcaag gccctggccg agggcgcgca
     1441 gccgggcgcg cgcggggaac ccggggcgca ccgcgccgtc atgttcggcg atcacggcgc
     1501 gaaggggagc agcggcgggc gacgtccaga aaagcctgtc cccgtccacg ctccagacga
     1561 ggacgcccgc cccgcccttc acgaaggcgg caaagcccgg atcgccgccg agcgcggcaa
     1621 tcgcctcctc aatcgcacct cgccggtcca cgatgtcagc cccccaaacc tgccggaact
     1681 taatggttaa tttttctttg acatagaagg gtcgtcaggc actctctgcc gcagcaggcc
     1741 ggtgcagccc cgccccccgg ggtcgatccc ccaaggcaca attccattcc gcgtcgcagt
     1801 atgcgcggtg attccagacg ctaggaggtc acgatggctc aacagagcac tccctatgaa
     1861 gtcccacccg aaatgcgcga tttcgcggag aaaagcgtcg atcaggcgcg caaggcgttt
     1921 gacggcttca tgaccgccgc ccagcgaacc gtcgatacgc tcgagagttc cgcgaccagc
     1981 gtccagagca acacgaagga tctgacccaa agaaccttcg aatacgccga gcagaacgtc
     2041 agcgccgcct tcgacctcgc acagaagctc gtccgtgcca aggacgtgca ggaagccatg
     2101 cagcttcagg cggaatacgt gcgcagccag ttcgctgcca tgcagacgca gatgaaggag
     2161 ttcgggtcgc tggcgcagag cgctgcccag accgcggcgc aggcgaccgc cagtcaggcg
     2221 cgcgaattcg gatcgatggc ccaggaggcc gcccgctcgg cgaccgagca gccgacgcgc
     2281 gcgaccaaga cgaagcggta agaagctgat ccttgcggcc tgccccggac ttgggccggg
     2341 gtggccgtca ggacgctgtc aggctgctcc cggatctgct ccggggcgac gcgacgctta
     2401 ccagggctgc ggcctgagcg tccgctccag gacgtattgc gagccgtagc gcgtcgtgcg
     2461 ctccacgagg tagccgccgc tgacccgata cgtgcgctca tgcaggtaat cggcgccgct
     2521 gcgcgagaaa tcatccatca cgcggtcgag gcccccgccc cggcgcgcga cgtgcacggg
     2581 ccgctccttg cgggccatgc gccgcagctt gcgtgacggc ctggcgggcg ttgcggccgc
     2641 attttcatcg accgcgaccc gcttggccgc gcggggcgag gcatgcgcgg cctgccggct
     2701 ccgtcgctcc gccgcggcgt ggctccgcgg tttccttggc gtatgcgtca cgggttcagc
     2761 cgcctcttca ggctcgactt gctccgcagg tgcgctgcgg gccgcgcgcg tgaccggaac
     2821 ggccgcgggg gcaggctccg cgacctgcga tttcggtttt tcgggctgcg cggaaggagt
     2881 cgcggctgac gctgtctcca cagacttcgc ggcagacgcg ggcgcgccac cgctcgcctt
     2941 agcggtcgtc tgggaagacg gcgcggccgc aggcgcggtc g
//
LOCUS       DATAIQ010000653         1901 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_127107, whole genome shotgun sequence.
ACCESSION   DATAIQ010000653 DATAIQ010000000
VERSION     DATAIQ010000653.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1901)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1901)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1901
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_127107"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..281)
                     /locus_tag="VHN20_10875"
     CDS             complement(<1..281)
                     /locus_tag="VHN20_10875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hopanoid biosynthesis associated glycosyl
                     transferase HpnI"
                     /protein_id="HEX2726313.1"
                     /translation="MTALRFALLALVAGSVVYQLLAIVATFRYRAVRILPLARRPRIS
                     ILKPLCGHEPGMDILLASHFEQDYPDFELLFGVHTLDDPAVAVVEALRHR"
     gene            complement(278..>1901)
                     /locus_tag="VHN20_10880"
     CDS             complement(278..>1901)
                     /locus_tag="VHN20_10880"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HEX2726314.1"
                     /translation="GVVYLDKTPLNMWLMAASYCVFGVHDWAARIPFALAAILLAWIV
                     YRFGAWAFTPRAGFYSAAGIATCLGMYLFTRTVIPDVMLAVAVAALFWSFSRALDPVS
                     PPSLRWPLLAGAALGAGLLLKGLIAAVLPCGIAALYLAVTRSLRHRDTWTRLRPFTIA
                     AVALMIAAPWFILATLRNPPYFDFTLSSGPGLWRGFFWRYFINEHVLRFLNLRYPRDY
                     NTVPAVWYWLMHLVWLFPWSAYLAAVATRWHGRALFSAETRSGRVRLLALLWVGVVTI
                     FFALSTSQEYYTMPAYPALFLLIGSAIDSGGRWVAWGSRVAGGIAALCFAATTSVLVS
                     VAGKPTPFDISAALTQNPEVYSLSMGHFLDLTLGAFAYLRLPLAIAAAAFAAGAFALI
                     YSRNIERAVLSLACMMVLFNVAAQRARAVFEPYLSSRPIADAINARRPDWIVFADEYD
                     ALSSVAFYTNRRPLIWEGRFNNLEYGSNAPGAPDIFLDDARLRGLWSGDRPVAIVTRD
                     AKLPRLETVLGSLSSAIVMRSGGKLLLLNRPA"
BASE COUNT          409 a          515 c          730 g          247 t
ORIGIN      
        1 cggtgccgca gtgcctcaac gacggcgacg gcggggtcat cgagggtatg gacgccgaag
       61 agcagttcga agtcggggta atcctgctcg aagtggctgg ctagcaggat gtccatgccg
      121 ggttcgtgtc cgcacagggg cttgaggatg ctgatgcgcg gccgccgcgc aagggggagt
      181 atgcgcaccg cgcggtaccg gaaggtcgca acgatggcaa gcagttgata cacgacgcta
      241 ccggcgacca gcgcgaggag agcgaagcgg agggcggtca tgccggccgg ttcaggagga
      301 gcaatttgcc gccggagcgc atcacgatgg cgctcgacag gctgccgagg acggtctcga
      361 gacgcggaag tttggcgtcg cgcgtcacga tggcaacggg ccgatcgccc gaccagaggc
      421 cgcggaggcg cgcatcgtcg aggaatatgt ccggagcgcc gggcgcgttc gaaccgtact
      481 cgaggttgtt gaagcgccct tcccagatga ggggacgccg gttggtgtag aaggcgacgg
      541 aggagagcgc atcatactcg tcggcgaaga cgatccagtc ggggcggcgc gcgttgatgg
      601 catcagcgat gggccgtgaa gaaaggtagg gttcaaagac ggccctggcg cgctgcgcgg
      661 caacgttgaa caggaccatc atgcaggcga ggctgaggac ggcacgttcg atgttccggc
      721 tgtaaatgag cgcgaaggct ccggcggcga aggccgcggc ggcgatggct agcgggaggc
      781 gcagataggc gaaggcgccg agcgtcaggt cgaggaaatg tcccatcgac agcgaataga
      841 cctcgggatt ctgggtgagg gccgcggata tgtcgaacgg cgtgggcttg ccggcgacgc
      901 tcacgaggac actcgtggtg gcagcgaagc agagtgccgc aatcccgccc gcaacgcgcg
      961 agccccaagc gacccacctg cccccggaat cgatggccga gccgatcagg agaaatagag
     1021 ctggatacgc gggcatcgtg tagtattcct gcgacgtcga gagcgcgaaa aagatggtca
     1081 cgacacctac ccagaggagc gcgagcaggc ggacgcggcc ggagcgagtc tcggccgaga
     1141 agagcgcgcg gccgtgccat ctggtcgcga cggcagcgag gtaggccgac caggggaaga
     1201 gccaaacgag gtgcatcagc cagtaccaga ccgcagggac tgtgttgtag tcacgcgggt
     1261 agcgaaggtt caggaagcgg agcacgtgct cgttgatgaa gtagcgccag aagaagccgc
     1321 gccagagtcc cggaccgctg ctgagagtga agtcgaagta cggcggattg cggagcgtcg
     1381 ccaggatgaa ccagggggcg gcgatcatga gagcgacggc tgcgatggtg aatggccgca
     1441 agcgcgtcca cgtatcgcga tgccgcaggc tgcgcgtgac ggcgaggtaa agcgctgcga
     1501 tgccgcaggg caggaccgcg gcgatgaggc ctttgaggag cagtccggcg ccgagcgcgg
     1561 cgcccgcgag caatggccat cgcaatgaag gtggagacac cgggtcgaga gcgcgcgaga
     1621 aactccagaa cagagcggcg acggcgaccg caagcatcac atccggaatg acggtgcggg
     1681 tgaagaggta catgccgagg caggtggcga taccggcggc ggaatagaat ccggcgcgag
     1741 gggtgaaggc ccaggcgccg aagcggtaga cgatccatgc gaggaggatg gcagcgagcg
     1801 cgaacgggat acgcgctgcc caatcatgca cgccgaagac gcaataggat gccgccatga
     1861 gccacatgtt gagcggtgtt ttgtcgaggt agacgacgcc g
//
LOCUS       DATAIQ010000654         5719 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_246459, whole genome shotgun sequence.
ACCESSION   DATAIQ010000654 DATAIQ010000000
VERSION     DATAIQ010000654.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 5719)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5719)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5719
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_246459"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..815)
                     /locus_tag="VHN20_10885"
     CDS             complement(<1..815)
                     /locus_tag="VHN20_10885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015933483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="invasion associated locus B family protein"
                     /protein_id="HEX2726315.1"
                     /translation="MSFATRLAHSRGSIAVAAAIGIGLVAPAIAQQPAQQQQPRPAQQ
                     RPAQPAQPATGQRPAAPQPAQPAPQAQQQQQPAGPTVVQVKPEPSQTDWTKVCGKDQA
                     AGFEICYTTRDFVSDQGQPVLAVAIYDAKGPQGQKIVRFLMPLGLLLQPGIRFAVDQG
                     QATPGKYAICFPNGCFAEAGGLKDDLINAMKKGTVLNVSVQNQAQREVTFAVPLAGFG
                     KAFDGPPIDPKVLQEQQQKLQEEMQKRSEEMRRRLEQSGGGGAPGAPGAPSLTG"
     gene            1068..2861
                     /locus_tag="VHN20_10890"
     CDS             1068..2861
                     /locus_tag="VHN20_10890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003611658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX2726316.1"
                     /translation="MAALMMGLATPGVQGPAIAAEAGRHGIAMHGEPALPADFTHFPY
                     ANPDAPKGGRIVFGAQGTFDSLNPFPVKGLSAAHGITSLVIETLMRRSLDEPFTLYPL
                     IARSIEVPADRSAVTFHLDPRARFSDGKPVTPADVRFTFELLREHGRPNYRNSYAKVA
                     GVDVPDDHTIRFDLAGANDRELPLILGLMPVLARHSLDAARFEATSFRPLLGSGPYTV
                     AAVKPGESISYRRDPTYWGADLPGNRGTFNFDEVRYDYYRDANSLFEAFRAGLYDYRV
                     ESDPTRWLSGYAVPAVRDGRIVREAVPSRLPKGMTGFVFNTRHAPFDDVRVREALGFL
                     FDFEWINKNLFSGVYRRTGSYFEGSPDISARGRPADAEERALLAPFPEAVRDDVLEGR
                     WQPLVSDGSGRDREPARRAIALLASAGFRQGDGVMRHRVSGAPLSFEIMVISRDQERI
                     ALTFAKSLSRIGVVARVKAVDSVQFERRRQRFEFDMMIASWPVSPSPGNEQIFRWGSQ
                     SAQREASFNFAGAKSPAIDAMIEALLAAASRDSFTAAVRALDRVLLSGFYVVPLYHLP
                     EQWLAYNAALKRPATMPLFGPAADLWWRVSP"
     gene            2920..4215
                     /locus_tag="VHN20_10895"
     CDS             2920..4215
                     /locus_tag="VHN20_10895"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I adenylate-forming enzyme family protein"
                     /protein_id="HEX2726317.1"
                     /translation="MSALAAVAQIPEEQPVEMSWGAMRLSGLLAATADRHTRRIALKD
                     QSNRQDWSGRPPIEWTYPFAYDVIERLAHFLLQLGLPPKTPVGICLPNGSEACLTILA
                     VDHAGLVPCLLPVAWAEEELGAAVEAANITTVITQGVVGDQRPAELFCRLAARYFGLR
                     FVCSFGPLVPDGVADLDRVILGAEAPKTGVAPQIEASSDNGVVTFSHRQGKGLKPVFR
                     PCQSVVAAAVTFLVTAKIRAGERIVSLLAPDDHCGMTVGLIASLLSGATLECHGLFSA
                     RAFMEALKDETPTHLVVPAWMEASLAKAALPKSIVSVILTHEAPTRFKAKTSLRGSVI
                     DILAFGELALIAGQRKGAGQFSLSLEDDGDAGNATSRHLLRVRRAEDGAIAFGGIAAD
                     VRGFDRGGPSAPAPQPDWRPSGYKAELFAGILIGVSEKG"
     gene            4294..4641
                     /locus_tag="VHN20_10900"
     CDS             4294..4641
                     /locus_tag="VHN20_10900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019904059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726318.1"
                     /translation="MNDFPKVLVVDDGERAPDDALSAELAGLGYASVTASLEAAEDVL
                     AVIPRPSAILLQLPKAVDPGRHKSFQDLADRLKLRNAGIPVLLVEPRVYGGAYSGTEQ
                     PIGTNPVAEPDRS"
     gene            complement(4734..>5719)
                     /locus_tag="VHN20_10905"
     CDS             complement(4734..>5719)
                     /locus_tag="VHN20_10905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015824276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="TRCF domain-containing protein"
                     /protein_id="HEX2726319.1"
                     /translation="VKSFLDKEVPEAKVAVAHGQMAAGQLEDVMTAFYEGKFDILLST
                     SIVESGLDIPTANTLVVHRADMFGLAQLYQLRGRVGRSKTRAYALFTVPPNRNLTLQA
                     ERRLKVLQSLDTLGAGFQLASHDLDIRGAGNLLGEEQSGHIKEVGYELYQQMLEEAVA
                     ALKAGVEEPAEEQWSPTIAIGSPVMIPETYVADLQLRLGLYRRLAGFETDAEMEAFGA
                     EMIDRFGPLPDEVGQLLKIMAIKVLCRRANVEKVEGGPKGIIVSFRDNAFADPAGLVS
                     YVAEQGSFAKVRPDMKIVFIRDLEDLEERLKATTAILRNLVRIAEKTKKAA"
BASE COUNT          858 a         1958 c         1884 g         1019 t
ORIGIN      
        1 ccggtgaggg aaggcgcgcc gggcgcgccg ggggcgccgc ccccaccgct ctgctcgagc
       61 cggcgacgca tctcctcgct gcgcttctgc atctcttcct ggagcttctg ctgctgctcc
      121 tggagcacct tgggatcgat cggcgggccg tcgaaggcct tgccgaaccc ggccagcggc
      181 accgcgaagg tgacttcgcg ctgcgcctgg ttctgcacgc tgacattgag cacggtgccc
      241 ttcttcatgg cgttgatcag gtcgtccttg aggccgcctg cctcggcgaa acagccgttg
      301 ggaaagcaga tcgcgtattt gccgggggta gcctgcccct gatcaaccgc gaagcggatg
      361 ccgggttgca gcaacaggcc gagcggcatc aggaagcgga cgatcttctg gccctgggga
      421 cccttggcgt cgtagatggc caccgccagc accggctgcc cctgatccga gacgaaatcc
      481 cgggtcgtgt agcagatctc gaaacccgcc gcttggtcct tgccgcagac ctttgtccaa
      541 tccgtctgcg atggctccgg cttgacctgg acgaccgtcg ggccggccgg ctgctgctgc
      601 tgctgggcct gcggcgccgg ttgcgcgggc tggggagcgg cggggcgctg gcccgtcgcc
      661 ggctgcgcgg gttgggccgg gcgctgctgc gcgggccgcg gctgctgctg ctgggccggc
      721 tgctgggcga tggcgggcgc gacaaggccg atgccgattg ccgcagcaac agcgatcgat
      781 cctcgcgaat gcgcgagacg ggtcgcgaat gacatttcgt tcgtcctctt ggatctggga
      841 gcgaatgcaa agcgctcggt tgagcgcgaa cggaggtccg ggctggcctg tggaacgctg
      901 catcctcatg gaatgcggcg aagacatgac acgagtcgcg cctctttaac cttttgaagc
      961 ccttgtttcc acccgtcttt gcctgatcgt cgccgatgat ttaggtccga aatatgattt
     1021 gccggcgagt caggcatttg cggcgcagct tgcggttgca gggcgccttg gcggccctca
     1081 tgatggggct cgcgaccccg ggggtccagg gccccgcgat cgccgccgag gcgggccggc
     1141 acgggatcgc catgcacggg gagccggcgc tccccgccga tttcacgcat ttcccttacg
     1201 ccaatccgga cgcgccgaaa ggcgggcgca tcgtgttcgg cgcccagggc acgttcgaca
     1261 gcctcaatcc gtttccggtg aagggcctct cggccgccca tggcatcacg agcctcgtca
     1321 tcgagacgct gatgcggcgc tcgctcgacg agccgttcac gttgtatccg ctgatcgccc
     1381 gcagcatcga ggtcccggct gaccgcagcg ccgtcacctt ccatctcgat ccgagggcgc
     1441 gcttctcgga cggcaagccc gtcaccccgg ctgacgtgcg tttcacgttc gagctgctgc
     1501 gcgagcacgg ccgtcccaac taccgcaact cctatgcaaa ggtcgccggg gtcgacgtgc
     1561 ctgacgacca taccatccgc ttcgacctcg cgggcgccaa cgaccgcgag ttgcctctga
     1621 tcctggggct catgccggtg ctggcccggc attccctcga cgcggcgcgc ttcgaagcca
     1681 cgtcgttccg gcctctcctc ggctccgggc cctataccgt cgccgcggtc aagcccggcg
     1741 agagcatcag ctatcggcgc gacccaacct attggggcgc cgacctgccg ggcaatcgtg
     1801 gcacattcaa tttcgacgag gtccgctacg actattatcg cgacgccaat tcgctgttcg
     1861 aagccttcag ggccgggctc tacgattatc gcgtcgagag cgatccgacg cgctggctca
     1921 gcggttacgc cgttcccgcc gtgcgcgacg gccgcatcgt ccgcgaggcc gtgcccagcc
     1981 gcctgccgaa gggcatgacc ggcttcgtgt tcaacacccg tcacgcgcct ttcgacgatg
     2041 tgcgcgtgcg cgaggcgctt ggcttcctgt tcgacttcga atggatcaac aagaacctgt
     2101 tcagcggcgt ctaccggcgc acgggcagct atttcgaagg gtcaccggat atttcggcgc
     2161 gcgggcggcc tgccgatgcc gaggaacggg ccttgctggc cccgttcccg gaggcggttc
     2221 gcgacgacgt gctcgaaggc cgatggcagc cgctggtctc ggatggttcg gggcgcgacc
     2281 gcgagccggc gcggcgtgcc atcgccctgc tcgcctcggc cggcttcagg cagggtgacg
     2341 gcgtcatgcg ccaccgcgtt tcaggcgcgc cgctgtcctt cgagatcatg gtgatctcgc
     2401 gcgaccagga gcgcatcgcc ctgacctttg cgaaaagcct gagccgcatc ggtgtcgtcg
     2461 cccgcgtcaa ggccgtcgac agcgtccagt tcgagcggcg ccggcagcgc ttcgagttcg
     2521 acatgatgat cgcctcgtgg ccggtgtcgc cgtcgccggg caacgagcag atcttccgct
     2581 ggggctcgca gtcggcacag cgcgaagcct cgttcaattt cgcaggcgcc aaatcccccg
     2641 ccatcgatgc catgatcgag gcgctcctgg cggccgcgtc ccgggacagc ttcacggccg
     2701 cggtgcgggc gctcgaccgc gtgctcctgt cgggcttcta cgtcgtgccc ttgtaccacc
     2761 tgcccgagca gtggctcgct tacaacgccg ccctgaaaag gcctgcgacg atgccattgt
     2821 tcgggcctgc ggccgacctt tggtggcgtg tgtccccctg attgcgcatg atgccggcgc
     2881 gattcgcaat caccaaccgg attcacggaa ctacacgaga tgagcgccct cgcggccgtc
     2941 gcgcaaatcc cggaagaaca gcccgtcgag atgagctggg gagcgatgcg gctgtccggc
     3001 ctgcttgccg ccactgccga tcgccacacc cgtcgtatcg cgttgaagga ccagtcgaat
     3061 cgccaggact ggagcggccg cccgccgatc gaatggacct atcccttcgc ctatgacgtg
     3121 atcgagcggc tggcgcattt tctcctgcag ctgggactgc cgccgaagac ccccgtcggg
     3181 atctgtctcc ccaacgggtc ggaggcctgc ctcaccatcc ttgccgtcga ccacgccggg
     3241 ctcgtcccgt gtctgctgcc ggtggcctgg gcagaggagg aactgggcgc ggccgtggaa
     3301 gcggccaaca tcacgacggt gatcacgcag ggagtggtcg gggaccagcg gccggccgag
     3361 ctgttctgcc ggctggcggc gcgctatttc ggcctgcgct tcgtctgctc gttcgggcct
     3421 ctggtgcccg atggggtggc cgatctcgat cgcgtcatcc tgggcgccga agcgccaaaa
     3481 accggagtgg ctccgcagat cgaggcgagc agcgacaacg gggtcgtcac gttctcgcat
     3541 cggcagggca aggggctcaa gccggtcttt cgtccgtgcc agtcggtggt cgccgcggcc
     3601 gtgaccttcc tggtcaccgc caagatccgg gccggcgaac gcatcgtcag cctcctcgcg
     3661 ccggacgacc attgcgggat gaccgtcggg ctgatcgcat ccctgctcag cggcgcgacc
     3721 ctcgaatgcc acggattgtt cagcgcccgc gctttcatgg aggcgctcaa ggacgagacc
     3781 ccgacccatc tcgtggtccc ggcatggatg gaggcgagcc tcgccaaggc ggcgctgccc
     3841 aaatcgatcg tttccgtgat cctgacccac gaagccccga cccgcttcaa ggcgaagact
     3901 tcgctgcgcg gctcggtgat cgacatcctc gctttcggcg aactcgctct gatcgccggg
     3961 cagcgcaagg gggcaggcca gttttccctg tcgctcgagg acgatggcga tgccggcaac
     4021 gcgacgagcc ggcacctgct gcgggtcagg cgggcagagg acggcgcgat cgcattcggc
     4081 ggcatcgcgg ccgatgtccg gggcttcgac cggggcggcc caagcgcccc ggcgccgcag
     4141 ccggactggc gtccgtcagg ctacaaggcg gaactgttcg caggcatcct gatcggggtt
     4201 tccgagaaag gttaacagga acaacccgac gttcttgtgc gttgcaggaa aagtcccgtt
     4261 tcctccccgc ccttttctgc gtactgacgc cacatgaacg atttcccgaa ggttctcgtc
     4321 gtcgatgacg gcgagcgcgc tcccgatgac gctctgtccg cagagctcgc gggcctgggc
     4381 tatgccagcg tgacggcgtc gctcgaagcc gcggaggatg tcctcgcggt gattccgcgg
     4441 ccgtcggcga tcctcctgca gctgcccaaa gcggtcgacc cgggccgcca caagtcgttc
     4501 caggatctcg ccgaccgcct caagctgcgc aatgccggca tcccggttct gctcgtcgag
     4561 ccgcgcgtct acggcggcgc ctattcgggc accgagcagc cgatcggaac caatccggtg
     4621 gcagagccgg accgctcgta acgcctctcc ccgaaccggg tgcgcggacc gggtgagacc
     4681 ctgcggcccg cccctcccct cactccaatc ctcgcgcacg agcgggagag ggtctaagcc
     4741 gccttcttgg tcttttcagc gatgcgcacg aggttacgca ggatcgccgt agtcgccttg
     4801 aggcgctcct cgagatcttc caggtcgcgg atgaagacga tcttcatgtc aggcctcacc
     4861 ttggcgaacg agccctgctc ggcgacgtag gacacgagcc cggccggatc cgcgaacgcg
     4921 ttgtcgcgga acgagacgat gatgcctttc ggcccgccct cgaccttctc gacgttggcg
     4981 cggcggcaca ggaccttgat ggccatgatc ttgaggagct ggccgacctc gtccggcagt
     5041 ggcccgaaac ggtcgatcat ctcggccccg aaagcctcca tctccgcgtc ggtctcgaac
     5101 cccgccagcc ggcggtaaag gccgagccgc agctgcagat cggcgacata tgtttccggg
     5161 atcatgaccg gggagccgat ggcgatggtc ggggaccatt gctcctcggc cggctcctcc
     5221 acgccggcct tcagggccgc gaccgcttcc tcgagcatct gctggtagag ctcgtagccg
     5281 acttccttga tgtgacccga ctgctcctcg ccgaggaggt tgccggcgcc gcggatgtcg
     5341 aggtcgtgcg aggcgagctg gaagccggcg ccgagcgtgt cgagcgactg caacaccttg
     5401 aggcgccgct ccgcctgtag cgtcagattg cggttcggcg gcaccgtgaa gagcgcataa
     5461 gcgcgtgtct tcgagcgccc gacccggccg cgcaactgat agagctgcgc caggccgaac
     5521 atgtcggcgc gatgcacgac cagggtgttg gcggtcggga tgtcgaggcc ggattcgacg
     5581 atgctcgtcg agagcaggat atcgaacttg ccttcgtaga aggccgtcat cacgtcctcg
     5641 agctgtcccg ccgccatctg cccgtgcgcc acggcgacct tcgcttccgg cacttccttg
     5701 tccaggaagc tcttgacct
//
LOCUS       DATAIQ010000655         2483 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_61695, whole genome shotgun sequence.
ACCESSION   DATAIQ010000655 DATAIQ010000000
VERSION     DATAIQ010000655.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2483)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2483)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2483
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_61695"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..271)
                     /locus_tag="VHN20_10910"
     CDS             complement(<1..271)
                     /locus_tag="VHN20_10910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019515447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HEX2726320.1"
                     /translation="MNIHEYQAKELLAGFGVPVPAGHAAMSVDEAVVAAEKLPGPLWV
                     VKAQIHAGGRGKGTFTNGFQGGVKLVSSPEEARDIAAKMLGQTLVT"
     gene            427..1500
                     /gene="dinB"
                     /locus_tag="VHN20_10915"
     CDS             427..1500
                     /gene="dinB"
                     /locus_tag="VHN20_10915"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007616044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HEX2726321.1"
                     /translation="MTDAPTRKIIHVDMDAFFASVEQRDNPELRGRPVAVGGGHRGVV
                     AAASYEARVFGVRSAMPSVTARRRCPELVFVKPRFDAYRAVSEQVRAIFAEFTDLIEP
                     LSLDEAYLDVSDDRLGLGSGRAIAEAIRARIRDETGLTASAGVSYCKFIAKLASDHRK
                     PDGLTVIPPAKGAAFVAALPVARFHGVGPKTAARMERLGIRTGADLAAWGRHELEAHF
                     GSSGEWYWKIARGIDERPVRASRARKSVSAERTFDRDLADPAELARELDRVAGLAWQR
                     IERAEAAGRAVTLKVKLADFTIITRSRTLVRTVADEADFAAVGQTLLAGLVPLPMGVR
                     LLGLGLHALEQGTDSPRQLGLAI"
     gene            1666..2199
                     /locus_tag="VHN20_10920"
     CDS             1666..2199
                     /locus_tag="VHN20_10920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003039510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CarD family transcriptional regulator"
                     /protein_id="HEX2726322.1"
                     /translation="MAAKAVSFDVGDYVVYPKHGVGRVVELQSTEIAGTALDLYVLRF
                     EKEKMTLRVPVNKADSVGMRKLSSDKAMKDALETLKGKPKVKRTMWSRRAQEYEAKIN
                     SGELTLIAEVVRDLFRPDDAPEQSYSERQIFEAASSRLARELGAMEKTDEKGALAKIL
                     EILNKAAVLHHKKTEDA"
BASE COUNT          415 a          828 c          860 g          380 t
ORIGIN      
        1 gcgtcacaag cgtctgcccg agcatcttcg cggcgatgtc gcgtgcttcc tcgggcgaac
       61 tcacgagctt cacgccgcct tggaatccgt tcgtgaatgt ccccttgccg cgcccgccgg
      121 cgtggatctg cgccttcacg acccacaaag gcccggggag tttttcggcg gcgacaaccg
      181 cttcgtcgac gctcatcgcg gcatggccgg ccggcaccgg aacgccgaag ccggcgagca
      241 attccttggc ctgatattca tggatgttca tggcgcgacc ttaagcagat tgtccgccgc
      301 gatgcaaaac cggcgagtct tcaccaatgt tcacggtcac gggaagctta actgcgcgac
      361 gggcgatgtc gactcgccag gcatcgccct agactccgag gggcgctgta ggacaggaaa
      421 atcgtcgtga ccgacgcgcc gacccgcaag atcatccacg tcgacatgga cgccttcttc
      481 gccagcgtcg agcagcgcga caatcccgag cttcgcggcc ggccggtggc ggtcggcggc
      541 ggacatcgcg gcgtggtcgc ggcggcgagc tacgaggcgc gggtgttcgg agtgcgctcg
      601 gctatgccgt cggtcaccgc ccggcggcgc tgccccgagc tggtgttcgt caagccgcgg
      661 ttcgacgcct atcgcgcggt cagcgagcaa gtccgcgcga tctttgcgga gttcaccgat
      721 ctgatcgagc cgcttagcct cgacgaggcc tatctcgacg tcagcgacga ccgcctcggc
      781 ctcggcagcg ggcgggcgat cgccgaagcg atccgcgccc ggatccgcga cgagaccggg
      841 ctcaccgcct cggccggggt cagctactgc aagttcatcg ccaagctcgc gagcgaccac
      901 cgcaagccgg acggcctgac cgtcatcccc ccggccaagg gcgccgcgtt cgtcgccgcg
      961 ctgccggtgg cgcggttcca cggggtcggg ccgaagaccg cggcgcggat ggagcggctc
     1021 ggcatccgca ccggggccga cctcgccgca tggggccggc acgagctcga ggcgcacttc
     1081 gggtcgagcg gcgaatggta ctggaagatc gcgcgcggaa tcgacgagcg gccggtgcgc
     1141 gcgtcgcggg cgcgcaagtc ggtcagcgcc gagcgcacct tcgaccgcga ccttgccgac
     1201 ccggccgagc tagcgcgcga gctcgaccgc gtcgccggcc tcgcctggca gcggatcgaa
     1261 cgcgccgagg ccgccgggcg ggcggtcacg ctcaaggtca agctagcgga cttcacgatt
     1321 atcacccgct cgcgaacgct ggtacggacg gtcgccgacg aggccgactt cgctgccgtc
     1381 ggccaaacgc tgctggcggg cctggtgccg ttgccgatgg gcgtccggct gcttgggctc
     1441 ggcctccacg cgctcgaaca gggcacggat tcgccgcgcc agctggggct ggcgatttga
     1501 tgacatatat gttatagaat cgcgcgaggg ccgccgcatc ccgcgacggc ccaatgtgtg
     1561 cgatatctcg aaaaacgggg gaactcggcc gcgggtcgtt gggggacgat gcggccgctt
     1621 gaaggttcca tgcccgtacc cgggcgcaac agagaggtta gattgatggc ggcgaaggca
     1681 gtgagcttcg atgttggcga ttacgtcgtt taccccaagc atggcgtcgg ccgggtggtc
     1741 gagcttcaga gcaccgaaat cgccggcacc gcgctcgacc tctacgtcct gcgcttcgaa
     1801 aaggaaaaga tgaccctgcg ggtgcccgtc aacaaggcgg actcggtcgg catgcgcaag
     1861 ctgtcgagcg acaaggcgat gaaggacgcg ctcgagacgc tcaagggcaa gcccaaggtc
     1921 aagcgcacca tgtggtcgcg ccgcgcccag gagtatgagg cgaagatcaa ttcgggcgag
     1981 ctaaccctga tcgccgaggt ggtgcgcgac ctgttccgcc ccgacgacgc gcccgagcag
     2041 agctattccg agcggcagat cttcgaagcc gccagctcgc gcctggcgcg cgaactcggc
     2101 gcgatggaga agaccgacga gaagggcgcg ctggccaaga tcctggagat cctgaacaag
     2161 gccgcggtgc tccatcacaa gaagaccgag gacgcctgag cctcaagcta ggcgattacg
     2221 cgagagggcg cttccgcaag gaggcgccct ttttcgtggc cgcgcctagg ctgcgcccga
     2281 ggagaggccc gggccgtcac gggagtaaat cccgtgacgt cagtcctgtc cgctccgcgg
     2341 caggctggcc ggcgcgcccg cgctctccgc gctgctccgg cggccctcag gggccggcgt
     2401 cgctgcgctc gggcgggcgg cgcttatctt cgcaaactac tcggtcgatc gacgttttcg
     2461 gggaccgaag tgcgaagtta agc
//
LOCUS       DATAIQ010000656         3512 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_449575, whole genome shotgun sequence.
ACCESSION   DATAIQ010000656 DATAIQ010000000
VERSION     DATAIQ010000656.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3512)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3512)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3512
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_449575"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..332
                     /locus_tag="VHN20_10925"
     CDS             <1..332
                     /locus_tag="VHN20_10925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726323.1"
                     /translation="DFDAATGLVTIEHLSEFKAAVAALAADPAHRAAMTARQAADARN
                     WGMIDGRFGDRLRDLLRERVRVRETLTPAAPQHRGDIVDDQEVVALPVASISAIKNRI
                     AEGQPRA"
     gene            complement(254..1750)
                     /locus_tag="VHN20_10930"
     CDS             complement(254..1750)
                     /locus_tag="VHN20_10930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726324.1"
                     /translation="MSDQDSAPPISDIYRDLNQTDETPGLAALFSGGWLAWPIIKVHL
                     LWALMAKAGSWSSQADSDLALFDRSWRSRLRVLVQDIRTAARRGPTAYQQGHILLVGV
                     HKPIHDLQGRSHDFFFGDLARERIDGVDVEFVPIPLRNAPGEPPPESLGPLLAQARLL
                     TPALLPFQVNVARALHRELKSSALRGIAAPVAEIAALLAHFHARRILFGRFLAARRPR
                     LVVFTYAPGRMPEVAAAREAGIPVLELQHGVFGPADPDYHWSQRLKPLRSKMPLPDRI
                     AVFGEAFRNMLVAGGFWEPHDVKVCGCAAFDLVRTEPVESRSGSGRRVIIFSQPLFRD
                     EIRRVLLELAKLKPGNLHFSLVLHPTESNGEAFYRPVLDVLPGLRIIAPGRNSLRLML
                     AADVVVACNSLALLEACSLGRQAVSVTRRDGSAGLRDLIQLKDLDRIVTHVATGAELA
                     QALDRPEAGGSDAASARAFGQSLYALGWPSAIRFLIAEMLATGKATTS"
     gene            2007..3023
                     /locus_tag="VHN20_10935"
     CDS             2007..3023
                     /locus_tag="VHN20_10935"
                     /inference="COORDINATES: protein motif:HMM:NF013567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEX2726325.1"
                     /translation="MKTAIIGLGRMGMRHVTVTQQLGLDLVGLCDAAEATRGAAAEAL
                     GLDASVFFADAHSMLARTKPEVVVIATTAPAHEPLVISAAQAGVRHILCEKPLATSLR
                     ACDAMIEACARSGAKLAVNHQMRFMEQYTRPKELVNTPAFGGLSGVQVTAGNFGIAMN
                     GTHYFEMFRYLTDEAPALVAAWFSPERVPNPRGPQFEDAAGCIRLETASGKRFYMDCS
                     ADQGHGMFVVYSGRNGRIAIDELTGDMTLVQREAEHRALPTTRYGMPFETERLTVAPA
                     DAVAPTKAVLEALLAGKDYPTGEDGRLAMEILVASHISAREGGRVVNLRQEALPRDLA
                     LPIA"
     gene            3123..>3512
                     /locus_tag="VHN20_10940"
     CDS             3123..>3512
                     /locus_tag="VHN20_10940"
                     /inference="COORDINATES: protein motif:HMM:NF013567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEX2726326.1"
                     /translation="MGELLVPQASQKQCRVAFVGGGAMAREHIRAFADVPGVSLAGIA
                     NRTESKAGALASEFGLPLVTSAIDRLYEETKADIVQVSVYETAILPVMRQVLAHPWTV
                     LMEKPVGLNPAEAEAIEAAARAAGRRVY"
BASE COUNT          594 a         1190 c         1214 g          514 t
ORIGIN      
        1 gtgacttcga cgcggccacc ggcctcgtca ccatcgagca tctgtcggaa ttcaaggccg
       61 cggtcgccgc ccttgcggcc gatccggcac atcgcgcggc aatgacggcg cggcaggcgg
      121 ccgacgcccg caactggggc atgatcgacg gccgcttcgg cgaccggctg cgcgaccttc
      181 tgcgcgagcg cgtgcgggtc cgggagacgc tcacgcccgc ggcgccgcaa catcgcggag
      241 acatcgtcga cgatcaggag gtcgtcgctt tgccggtggc cagcatctcg gcgatcaaaa
      301 accggatcgc cgaaggccag ccgagggcgt agagggactg gccgaaggcg cgggccgagg
      361 cggcatcgct cccgcccgcc tcaggcctgt cgagcgcctg cgccagctcc gcgccggtcg
      421 cgacgtgcgt gacgatgcgg tccagatcct tgagctggat gaggtcgcgc aggcccgccg
      481 acccgtcccg gcgcgtcacc gacacggcct gccggccgag gctgcaggct tcgagcaggg
      541 cgagggagtt gcacgccacg acgacgtcgg ccgcaagcat caggcggagc gaattgcggc
      601 cgggcgcgat gatccgcagg ccaggaagca cgtcgaggac aggccggtag aaggcctcgc
      661 cgttgctctc ggtcgggtga agcacgaggc tgaagtgcag attgcccggc ttcaatttgg
      721 ccagctccag gagcacgcgc ctgatctcgt cgcggaagag cggctgcgag aagatgatga
      781 cgcggcgtcc agagcctgaa cggctctcga caggctcggt gcggactagg tcgaaggccg
      841 cgcatccgca caccttgacg tcgtggggct cccagaagcc gccggcgacg agcatgttcc
      901 ggaacgcttc tccgaaaacc gcgatgcgat caggcagggg catcttgctg cgcagcggct
      961 tgaggcgctg cgaccaatgg tagtcgggat ccgcagggcc gaagacgccg tgctgcagtt
     1021 cgagaaccgg aatgcccgcc tcgcgtgccg ccgcgacctc cggcatccgg cccggcgcgt
     1081 aagtgaagac gacgagccgc gggcgcctcg ccgccaggaa gcggccgaac aggatgcgcc
     1141 gcgcatgaaa atgcgccagc agcgccgcga tctccgcgac cggcgcggcg atgccgcgca
     1201 atgcgctcga cttcagctcc ctgtgcaggg cgcgcgccac gttgacctgg aagggcagca
     1261 atgccggcgt gagaaggcgg gcctgcgcca gcagcggacc cagcgattcg ggcggcggct
     1321 cgcccggggc attgcggagg gggatgggca cgaactcgac gtcgacgcca tcgatgcgct
     1381 cgcgggccag gtccccgaaa aagaaatcat ggctgcgccc ctgcaagtcg tgaatcggct
     1441 tgtgcacgcc gaccagcagg atgtgccctt gctggtacgc agtcggcccg cgccgcgctg
     1501 ccgtcctgat gtcttgcacg aggacgcgca gccgcgagcg ccaggagcgg tcgaacagcg
     1561 cgagatcgga gtccgcctgc gacgaccacg agccggcctt ggccatcaga gcccagagca
     1621 ggtgaacctt gatgatcggc caggcgagcc agccgccgct gaacagggcc gccaggccgg
     1681 gcgtctcgtc ggtctggttc aaatccctgt agatgtccga gatcggcggg gccgaatcct
     1741 gatccgacaa gcgtgacctc ttcacgagtt gcaagccgct cttagagcgg gatggcttcg
     1801 agttgaatcc ctattcgcgc ccgcttcctg cgcccggatc atccgtcccg cacgccggtc
     1861 ctgcggactt cggcctgatc acattcccgg cgatcgcggg gcggcgcgtc aaaactgccc
     1921 gccgcgtacc cttgacacgg cacggcccgt cggcaaccca cggcgggacc ggcgagcacg
     1981 cggcaagcca ggcaggaacc acggatgtga agacggctat catcggactg gggcgcatgg
     2041 gaatgcgcca tgtcacggtt acgcaacagc tcgggctcga ccttgtcggc ttgtgcgacg
     2101 cagccgaggc gacacgcggc gccgccgcgg aggccctcgg cctcgacgcg tctgtcttct
     2161 ttgccgacgc gcacagcatg ttggcccgca cgaagcccga ggtggtggtc atcgccacga
     2221 cggcgcccgc gcatgagccg ctcgtaatct cggccgcgca agcgggcgtg cgacatatcc
     2281 tgtgcgaaaa gccgctcgcc acctcgctgc gcgcctgcga cgccatgatc gaggcctgcg
     2341 cccgatcagg cgccaagctt gccgtcaatc accagatgcg attcatggag cagtacacgc
     2401 gtccgaagga actcgtgaac acgcccgcct tcggcgggct gtcgggcgtc caggtcacgg
     2461 cgggaaattt cggcatcgcc atgaacggaa cgcactattt cgagatgttc cgatacctca
     2521 cggacgaggc gccggcgctg gtcgcggcgt ggttctcgcc ggagcgggtg ccgaatccgc
     2581 gtggcccgca attcgaggac gccgccggat gcatccgcct ggagaccgcg tccggcaagc
     2641 ggttctacat ggactgctcg gcggaccagg gccacggcat gttcgtggtg tatagcggcc
     2701 gcaatggccg catcgccatc gacgagctga ccggcgacat gacgctggtt cagcgcgagg
     2761 ccgagcaccg ggcgctgccg actacgcgct acggcatgcc cttcgagacc gagcgcctaa
     2821 cggtcgcccc ggccgatgcc gtcgcgccga ccaaggccgt gctcgaggcc cttcttgccg
     2881 gcaaggatta tccgaccggg gaggacgggc gcctggccat ggagatcctc gtcgcaagcc
     2941 acatctcggc gcgcgagggc ggccgcgtcg taaacctccg ccaggaggcg ctgccgcgcg
     3001 acctcgccct gccgatcgcc tgacctggag cgggatcgct tcgtgcgaag cgatcccgct
     3061 ccacttattg tatcgcatga tctttttcgg caaagcggtg cccactttgc cggatcatgc
     3121 tcatgggaga attgctggtg ccgcaagctt cgcaaaagca atgccgtgtt gcgttcgtcg
     3181 gcggcggcgc catggcccga gagcacatcc gggccttcgc cgacgtgccg ggcgtcagcc
     3241 tggccgggat cgccaaccgc accgaaagca aggccggcgc cctcgcgagc gagttcggat
     3301 tgcccctcgt cacgagtgcg atcgaccgcc tctacgagga gacgaaggcc gatatcgtcc
     3361 aggtgtcggt ctatgagacc gcaatcctgc cggtgatgcg gcaggtcctg gctcatccct
     3421 ggacggtgct gatggagaag ccggtcgggc tcaaccccgc ggaagccgag gcgatcgagg
     3481 cggccgcgcg cgcagccggg cgccgggttt ac
//
LOCUS       DATAIQ010000657         3629 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_127266, whole genome shotgun sequence.
ACCESSION   DATAIQ010000657 DATAIQ010000000
VERSION     DATAIQ010000657.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3629)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3629)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3629
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_127266"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            137..373
                     /locus_tag="VHN20_10945"
     CDS             137..373
                     /locus_tag="VHN20_10945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726327.1"
                     /translation="MAVHYFHCTDGVDMVIDRKGQRMSSPDQILGHAHTVAARLMRAL
                     PGYDDWRNWTVHVYDEMGAVAIVDFPVARRRAAA"
     gene            complement(513..1877)
                     /locus_tag="VHN20_10950"
     CDS             complement(513..1877)
                     /locus_tag="VHN20_10950"
                     /EC_number="6.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012322276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004357 - glutamate-cysteine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--cysteine ligase"
                     /protein_id="HEX2726328.1"
                     /translation="MARDVSDATPIGARDELIEWIASGAKPEAEWRIGTEHEKIPFYK
                     AANAPVPYEGGIRALLEGLAGQNGWQPIMEDDHPIGLFDAEGGGAVSLEPGGQFELSG
                     APMASLHDTARELGVHLDQVKRVAEPLDIGFLTLGMSPKWSRAETPVMPKSRYRIMTN
                     YMPKVGSLGLDMMYRTATVQVNLDYGSEADMVKKLRVSLALQPVATALFANSPFTDGK
                     PNGFLSMRSHIWSDTDRDRTGMLAFAFEDGMGYERYVDWALDVPMYFVKRDATYHDTA
                     GASFRDLLAGRLAQMPGERATRSDWANHLSTLFPEVRLKRYLEMRGADIGPPDRITAL
                     SAFWVGLLYDEDALEGAWDLVKGWSKEDRERLRADVPRLALNATVAGRPVREVARDAL
                     ALARLGLQRRQLPDAAGGDESRYLEPLDSIVSRGRTPAEDLLDKHQGVWGGTVEPAFR
                     ECVF"
     gene            complement(2017..3159)
                     /locus_tag="VHN20_10955"
     CDS             complement(2017..3159)
                     /locus_tag="VHN20_10955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015927120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004357 - glutamate-cysteine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0042398 - cellular modified amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylate-amine ligase"
                     /protein_id="HEX2726329.1"
                     /translation="MAADFRFGIEEEFFVNDVIKRDAARVRVKEFFAACRSHFPDKDV
                     QREMLEPQVEVATPPTADFAEARQALTGLRRDVGAIAREHDLAIMAAGTHPLAVWTRH
                     RATAQSRYGKLMHDLQMLGARNMVCGLHVHVEVPDLAARVDLMNRALPFMPLVLALST
                     SSPFWQAQRTGLLGYRLAAYRELPRTGLPELFESAADYDRYIATLVAARAIEDSSYVW
                     WVIRPSRQHPTLELRVADSCTRAEDTLALAALYRCLVRRLCRDPSVNAGLTGASRAII
                     GENCWRAQRYGIHGSFVDEATRTAKPVAEVLEDALALVADDAAALGCAQELEGTRAIL
                     AQGTSADRQLALHTEALGRGLPNREALACVVDWLSAETVGEARAVH"
     gene            complement(3282..>3629)
                     /locus_tag="VHN20_10960"
     CDS             complement(3282..>3629)
                     /locus_tag="VHN20_10960"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012605866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016436 - rRNA (uridine) methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RsmE family RNA methyltransferase"
                     /protein_id="HEX2726330.1"
                     /translation="VEAAEQCGILAVPEVLPEEDFGSAIKALEPDRLVVFCDEEAPVA
                     NPVRALEQVGNTAGKLGVVVGPEGGFTDEERALVLGRPNCVRVSLGPRILRADTAAVA
                     VLAAVQATLGDWR"
BASE COUNT          584 a         1243 c         1238 g          564 t
ORIGIN      
        1 tgtgaatcgt ggggataagt cgagcgaatc gcttgaattg atcaaaccaa gataaagcca
       61 gcgtcacaaa gacgtgccac cgtcccccct ctgttacgac tagggaatac tagcgtgctg
      121 tgagtggagg gcgttgatgg cggttcatta cttccattgc accgatggcg ttgacatggt
      181 gatcgaccgt aagggccagc ggatgagcag tcccgaccag attctcggcc atgcgcatac
      241 cgttgctgca cggttgatgc gggccctgcc gggctacgac gactggcgca attggaccgt
      301 gcatgtctac gacgagatgg gcgcggtcgc gatcgtcgat tttcccgtgg cccggcgccg
      361 cgccgccgcc tgagtcgcga cgccgccgct gccagcctcg ccagcgctta gagcatgatc
      421 cggcgaagtg gacgccactt cgccgaaaag gatcatgcga cactctatga tgagaagcga
      481 agcgggatcg attcgatctg aattgatccc gcttagaaca cgcactcgcg aaaggcaggc
      541 tcgacggtgc cgccccagac gccctggtgt ttgtcgagca gatcctcggc cggcgtccgc
      601 ccgcgcgaca cgatgctgtc gagcggctcg agataacggc tttcatcgcc ccccgcggca
      661 tcgggcagtt gccgccgctg cagcccgagc cgcgccagcg cgagcgcgtc gcgcgccacc
      721 tcgcgcacag ggcgcccggc gacggtcgcg ttgagcgcca gccgcggaac gtcggcgcgc
      781 agacgctcgc gatcctcctt cgaccagcct ttgacgagat cccaggcgcc ctcgagcgcg
      841 tcctcgtcgt aaagcaggcc gacccagaag gcggacagcg ccgtgatgcg gtccggcggg
      901 ccgatgtcgg cgccgcgcat ctcgagatag cgcttgaggc gcacctccgg aaacagcgtg
      961 gacaggtggt tggcccagtc cgaacgcgtg gcgcgctcgc cgggcatctg cgcgaggcgg
     1021 ccggcgagca ggtcgcggaa cgaggccccg gccgtgtcgt ggtaggtcgc atcgcgcttg
     1081 acgaaataca tcggcacgtc gagggcccag tcgacgtagc gctcgtagcc catgccgtcc
     1141 tcgaatgcga aggcaagcat gccggtgcgg tcgcggtcgg tgtcgctcca gatgtgcgag
     1201 cgcatggaca ggaagccgtt cggcttgccg tccgtgaaag gcgagttggc gaataatgcg
     1261 gtcgccaccg gctgcaacgc gagcgacacg cgcagcttct tcaccatgtc ggcttcggag
     1321 ccgtaatcga ggttcacctg cacggtggcc gtgcgataca tcatgtccag cccgaggctg
     1381 ccgaccttgg gcatgtaatt ggtcatgatg cggtagcggc tcttcggcat cacgggggtt
     1441 tcagcccggc tccatttcgg gctcatgccc agggtgagga agccgatgtc gagcggctcg
     1501 gcgacgcgct tcacctggtc gagatgcacg ccgagctcgc gggcggtgtc gtgaaggctg
     1561 gccatcggcg ccccggacag ctcgaactgg ccccccggct cgagcgagac cgcgccgccg
     1621 ccctcggcgt caaagaggcc gatcgggtga tcgtcctcca tgatcggctg ccagccgttc
     1681 tggccggcga ggccctcgag cagggcccgg atgccgccct cgtagggcac cggcgcgttg
     1741 gcagccttgt agaacgggat cttctcgtgc tcggtgccga tccgccactc cgcctccggc
     1801 ttggcgcccg aggcgatcca ctcgatcagc tcatcgcgcg cgccgatcgg cgtcgcatcg
     1861 gaaacgtcgc gcgccatgcg ccacctcggt ccacgggatg ggcggggcga ccgcgagtcc
     1921 gcctcttgcc gcccctgaga aaatccggct gtagataggc cgccggtcac gcccctgcaa
     1981 tgaccggagt ggcggctgga tgcaaccgcc accccgtcaa tggacggccc gggcctcccc
     2041 gacggtctcg gcgctgagcc agtcgaccac gcaggcgagc gcctcccggt tcggaaggcc
     2101 gcggccgagg gcctcggtat gcagggccag ctgccggtcg gcgctggtgc cctgggccag
     2161 gatggcgcgg gtgccttcga gttcttgcgc gcagccgagc gcagccgcat cgtccgccac
     2221 cagggcgagc gcgtcctcga gcacctcggc caccggcttg gcggttcggg tcgcctcgtc
     2281 gacgaagctg ccgtggatgc cgtagcgctg cgcccgccag caattctcac cgatgatggc
     2341 ccgcgacgcc cccgtcaggc cggcattgac cgaagggtcg cgacacagtc gccgcaccag
     2401 gcagcggtac aaggccgcca gggccagcgt atcctccgca cgcgtacagc tgtcggccac
     2461 ccgcagctca agtgtcggat gctggcgcga cgggcggatc acccaccaca cgtagctcga
     2521 atcctcgatc gcccgcgccg ccaccagggt ggcgatatag cggtcgtaat cggccgcgct
     2581 ctcgaacagc tcgggcaggc ccgtgcgcgg caactcgcgg taggcggcga gccggtatcc
     2641 gagcagcccg gtgcgctgcg cctgccagaa cggcgacgac gtcgacagcg ccaggaccag
     2701 cggcatgaac ggcagcgcgc ggttcatgag gtcgacccgc gccgcgaggt cgggcacctc
     2761 gacgtggaca tgcaggccgc agaccatgtt gcgcgccccg agcatttgca gatcgtgcat
     2821 cagcttgccg tagcgcgact gcgcggtggc gcggtggcgc gtccacacgg caagcgggtg
     2881 cgtgccggca gccatgatcg cgagatcgtg ttcgcgggcg atcgcgccga catcgcggcg
     2941 cagcccggtc agggcctgcc gtgcctcggc gaaatcggcg gtcggcggcg tcgccacttc
     3001 cacctgcggc tcgagcattt cgcgctgcac gtccttgtcg gggaaatggc tccggcaggc
     3061 ggcgaagaat tccttcacgc ggacgcgggc ggcgtcgcgc ttgatcacgt cgttgacgaa
     3121 aaattcctcc tcgattccga agcggaaatc tgcggccatt ttggcctcct ttgttgttgc
     3181 tctccggcag accgcggtct gccaggcccg catcctggcg gcccggcgct ggcgccggcc
     3241 cggcccgaga aggtcatgga agcgatggct gggcgcggcg gctagcgcca gtcgccgagg
     3301 gtggcctgga cggcggcgag aacggccacg gcggccgtat cagcgcgaag aatgcgcggg
     3361 ccaagcgata cgcgaacaca attcggacgg ccgagaacaa gcgccctctc ctcgtcggtg
     3421 aacccgcctt cgggccccac gacaacgcca agcttgccag ccgtgttccc cacctgttcg
     3481 agggcccgga ccgggttcgc gaccggcgcc tcctcgtcgc agaacacgac cagccggtcc
     3541 ggctccaggg ccttgatcgc ggagccgaaa tcctcctccg gcaggacctc cgggacggcc
     3601 aggatgccgc attgctcggc cgcctcgac
//
LOCUS       DATAIQ010000658         1529 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_449620, whole genome shotgun sequence.
ACCESSION   DATAIQ010000658 DATAIQ010000000
VERSION     DATAIQ010000658.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1529)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1529)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1529
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_449620"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..951)
                     /locus_tag="VHN20_10965"
     CDS             complement(<1..951)
                     /locus_tag="VHN20_10965"
                     /inference="COORDINATES: protein motif:HMM:TIGR02122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HEX2726331.1"
                     /translation="MRKTLRWIIVCCGLFFVAGAAAATWHYLSKPTVVTVAVGPGGFE
                     DADLMAAFGRALAGDNAAVRLSIVATSGPVEALERLTSGAAQLAVMRGDGAASDRVRA
                     LAILRNDPVVIVAPEKPKIENFGGLKDKVLGVIGPPGANDALVAVLRRHYGAPGETRA
                     LPVVTRDIAAALSERKVDALLFVPPVSRGATVAESWAAVRTVSRRKLAFTGLDDAETI
                     AAAVPAYEAGEIPAGLFGGSPALPAEAVTTVQVATYLVADRSVANDTITRLTRALFEQ
                     RQRVAADVPAANLIKAASTDKDAVFPVHPGAKTYFDGEETT"
     gene            complement(997..1404)
                     /locus_tag="VHN20_10970"
     CDS             complement(997..1404)
                     /locus_tag="VHN20_10970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018260553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726332.1"
                     /translation="MRAGGYLLVVALALGAGHPGALQAAEAALEGAWLQEGTECATVF
                     ARSGKATSFKRPVNIFAPAFIISGSQVRTPQASCRIRSVKPAGDRRILALSCATGVAV
                     DQTRAVLEPTSDGSLRRYLNDQDTTGSSYRRCT"
BASE COUNT          238 a          526 c          518 g          247 t
ORIGIN      
        1 ggtcgtttcc tcgccatcga aataggtctt ggcgccggga tgcaccggaa acacggcgtc
       61 cttgtcggtg ctggccgcct tgatcaggtt tgccgccgga acgtctgctg ccacgcgttg
      121 gcgctgctcg aaaagcgccc gcgtcagccg tgtgatggtg tcgttcgcga cggaacggtc
      181 ggcgaccagg taggtcgcca cctgaacggt cgtgaccgct tctgccggca aggccggaga
      241 accgccgaac aggccggcgg gaatctcgcc cgcctcgtag gcgggcacgg cagcagcgat
      301 cgtctcggca tcatcgagac cggtaaacgc gagcttgcgc cggctcacgg tgcgcacggc
      361 cgcccagctc tctgcgacgg tcgcgccgcg cgacaccggc gggacgaaca gcaaggcatc
      421 caccttccgc tcgctgaggg ccgcggcgat gtcgcgcgtc accacgggca aggctcgcgt
      481 ctcaccgggg gctccgtaat ggcgccgcag gaccgcgacc agcgcgtcgt tggcgcctgg
      541 cgggccgatc acgcccagga ccttgtcctt gagcccgccg aaattctcga tcttcggttt
      601 ttcgggcgcg acgatcacga ccggatcgtt gcgcaggatc gcgagtgcgc ggacgcggtc
      661 ggatgcggcc ccgtcgccgc gcatgacggc gagttgcgcg gcgcccgacg tgagccgttc
      721 gagggcctcg acgggaccgg acgtcgccac gatcgagagc cggaccgccg cgttgtcgcc
      781 cgcgagggcc ctgccgaaag ccgccatcag atcggcgtcc tcgaacccgc ctggtccaac
      841 cgcgacggtg accacggtcg gcttcgacag gtagtgccat gtcgcggctg ccgctccggc
      901 gacaaagaac aacccgcagc agacgatgat ccagcggagg gtctttctca tgaagcccct
      961 ccgtggcgtg aacgggcatg ttgggtggtg cgcaagctag gtacagcgcc tgtagctgct
     1021 ccccgtcgta tcctgatcgt tgagatagcg gcgcagcgat ccgtccgatg tcggttccag
     1081 aacggcccgc gtctggtcga cggccacgcc ggtcgcgcag gacagggcaa gaatgcgccg
     1141 gtccccggcc ggcttgacgc tcctgatccg gcacgacgct tgcggcgttc tcacctggct
     1201 gccggatatg atgaacgccg gcgcgaagat attgaccggt ctcttgaatg aggttgcctt
     1261 tccgctgcgc gcaaaaacgg tcgcgcactc cgtgccctcc tggagccaag cgccctcgag
     1321 agccgcctcc gccgcttgca aggcccctgg gtgtccggcg cccaaagcga gcgcaacgac
     1381 gagcagatat ccgccggctc tcatgcacgc ctcccttgcg ggccacggct ggcgggaatg
     1441 gcgccgcgga tgccggcgac gaacctgcga gggtccatca tgagctccct tccttggtcg
     1501 gcccgagttg cgatcgtcag tggccgccg
//
LOCUS       DATAIQ010000659         1981 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_338304, whole genome shotgun sequence.
ACCESSION   DATAIQ010000659 DATAIQ010000000
VERSION     DATAIQ010000659.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1981)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1981)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1981
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_338304"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..499
                     /locus_tag="VHN20_10975"
     CDS             <1..499
                     /locus_tag="VHN20_10975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011440410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX2726333.1"
                     /translation="NSAVEEALYLANIASRVTLVHRRDGLRAERILQDRLFKHERISV
                     IWDSALEEITGSDTPPSVTHVRLRNLKTGSVSELRTDGVFVAIGHKPATELFAGQLDM
                     KAGAYLLTAPDSTATNVPGVFAAGDVTDDVYRQAVTAAGMGCMAALEAERYLAAQEAT
                     REAAE"
     gene            629..1519
                     /locus_tag="VHN20_10980"
     CDS             629..1519
                     /locus_tag="VHN20_10980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012452953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEX2726334.1"
                     /translation="MDWDKLRIFYTVAEAGSFTRAGDALGLSQSAVSRQISALERELK
                     APLFHRHARGLILTEQGDLLFRAARDMKMRLETTRARLVETSERPTGELKVTTTVGLG
                     SLWLTQRLGEFLDLYPDVRIELILTNEELDLAMREADVALRLRRPAQPDLIQRRLFTI
                     HFHVYAAPDYIKRFGEPKALEDLDHHRIVSFGGDQPSYLLAVHWLSTAGRDARDPRPY
                     HLVVNNIAGLKTAVESGAGIGVLPDYAADGNSKLVQILRDVEMPSLDSYLVYAEEMRS
                     VARVQAFRDFLIAKAQRWTY"
     gene            complement(1771..>1981)
                     /locus_tag="VHN20_10985"
     CDS             complement(1771..>1981)
                     /locus_tag="VHN20_10985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007567812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase catalytic
                     subunit MsrP"
                     /protein_id="HEX2726335.1"
                     /translation="RPKTFWEALQPSEYGFWANVNPAVSHPRWTQAKERVLGTEETRP
                     TLIYNGYGDYVAGLYKGLEKERLFV"
BASE COUNT          329 a          689 c          624 g          339 t
ORIGIN      
        1 caatagcgcg gtcgaggagg cgctttatct cgccaatatc gcgtccaggg tcacgctcgt
       61 ccaccgccgc gatgggctgc gcgccgagcg catcctgcag gaccgcctgt tcaagcacga
      121 gagaatctcg gtgatctggg acagcgctct cgaggagatc accggcagcg acacgccgcc
      181 ctcggtgacg catgtgcgcc tgcgcaacct gaagacgggc tcggtgtcgg agctgcgcac
      241 ggacggcgtg ttcgtcgcca tcgggcacaa gccggcgacc gagctgttcg ccggccagct
      301 cgacatgaag gcgggcgcct acctgctgac cgcgccggac tccaccgcga ccaatgttcc
      361 cggtgtgttc gccgccggcg acgtgaccga cgatgtttat cgacaagcgg tgaccgcggc
      421 gggtatgggt tgcatggccg cgctcgaagc cgagcgctat cttgccgcac aggaagccac
      481 gcgcgaagcc gccgaatgaa gcggcgccgc ggagcatgat ccggcggagt cgatacgact
      541 tcgctgataa agatcgtgtg gctcgacaag aaatagagcg ggatggattc aatctgactc
      601 gaaatcccgc tctaggggga aggcagcttt ggactgggac aagctacgca tcttctacac
      661 ggtcgccgaa gccgggagct tcacgcgcgc cggcgacgcg ctcgggctca gccagtcggc
      721 cgtgagccgc cagatcagcg cgctcgaacg cgagctgaag gcgcccttgt ttcaccgcca
      781 tgcgcgcgga ctgatcctga ccgagcaggg cgatctcctg ttccgcgccg cgcgcgacat
      841 gaagatgcgg ctggagacga cccgcgcccg cctcgtcgag acgagcgagc ggccgaccgg
      901 agagctcaag gtgaccacca ccgtgggcct cggctccctc tggctgacgc agcgcctcgg
      961 cgaattcctg gacctctatc cggatgtgcg catcgagctg atcctcacca acgaggagct
     1021 cgacctcgcc atgcgcgagg ccgacgtcgc cttgcgcctg cggcgcccgg cccagcccga
     1081 cctgatccag cgccgcctgt tcacgatcca cttccacgtc tatgccgcgc ccgactacat
     1141 caagcgtttc ggcgagccca aggcgctcga agacctggac catcaccgca tcgtgtcgtt
     1201 cggcggcgac cagccctcgt accttctcgc cgtgcattgg ctgtcgaccg cgggccgcga
     1261 cgcgcgcgac ccacgcccgt accacctcgt cgtcaacaac atcgccggcc tcaagaccgc
     1321 ggtggaaagc ggcgccggca tcggcgtgct cccggattac gctgccgacg gcaactccaa
     1381 gctcgtccag atcttgcgcg acgtcgagat gccctcgctc gacagctacc tggtctatgc
     1441 ggaggaaatg cgctcggtgg cgcgcgtgca ggcgttccgg gatttcctga tcgccaaggc
     1501 gcagcgctgg acctactgag tcgtccgcgc tcacggcaat atcgtccatc ggcggcgggc
     1561 acgaatgttc catgcgagtc ccgcatggcc ttcatgacct cgcgctgcgt tgccggaatg
     1621 ctccccggac ccgatcttgc gcgtggctga acggcggttc cgcactcctc ccagcggcgc
     1681 cgccgcagcc gttcccctct ggaaggtcct ttcggaccta cctcatagcc gggccccttg
     1741 ggcccggctt ttttgtctcg gtcgtcagcc tcacacgaag agccgttcct tctcgagccc
     1801 cttgtagaga ccggcgacgt agtcgccgta gccgttgtag atgagcgtgg gtcgcgtctc
     1861 ttcggtgcca agcacgcgct ctttcgcctg cgtccagcgc ggatgcgaaa cggccgggtt
     1921 cacgttggcc cagaacccgt attccgaggg ctgcagcgct tcccagaacg tcttcggacg
     1981 t
//
LOCUS       DATAIQ010000660         2816 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_338333, whole genome shotgun sequence.
ACCESSION   DATAIQ010000660 DATAIQ010000000
VERSION     DATAIQ010000660.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2816)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2816)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2816
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_338333"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..950
                     /locus_tag="VHN20_10990"
     CDS             <1..950
                     /locus_tag="VHN20_10990"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009799087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004055 - argininosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HEX2726336.1"
                     /translation="TSIARPLIAKKQIEIAEKVGADAVAHGATGKGNDQVRFELSYYA
                     LKPDVTVIAPWREWDLTSRTRLIEFAEAHQIPIAKDKRGEAPFSVDANLLHASSEGKV
                     LEDPAQEVPDYVYSRTLDPEEAPDKPTYITVDFERGDAVAIDGKRMSPATLLTRLNEL
                     GRANGIGRLDLVENRFVGMKSRGMYETPGGTILVQAHRGIESITLDRGAAHLKDELMP
                     RYAELIYNGFWFAPEREMLQALIDKSQELVTGSVRLKLYKGGVFVVGRDSPYSLYDQE
                     LVTFEEGAVAYDHRDAAGFIKLNALRLRTLAQRKKKLGL"
     gene            1030..1824
                     /locus_tag="VHN20_10995"
     CDS             1030..1824
                     /locus_tag="VHN20_10995"
                     /inference="COORDINATES: protein motif:HMM:NF024986.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pentapeptide repeat-containing protein"
                     /protein_id="HEX2726337.1"
                     /translation="MQGNVGLPAHTPSRTAAQALKAAAPLLLLLAAAGSAQARCADAP
                     RAGVDWTGCTKPQLMLSGDDLSGAVFSKSYLSATDFARSKLSAARLDEADVSFAKFEA
                     TDLSGADLTKAVGWRVNFTRANLNKARLHMAQMIRSSFVQAKFAGADLSKSEMNRSDF
                     GGADLSGVDMSKAELARVVFTNARLSGANFSNANLSRANLTGVDLDGANLTGAYLFLT
                     NVRGANLSRTSGLTQAQLDLACGTAETKLPSALAQPKGWPCTDDDE"
     gene            complement(1888..2187)
                     /locus_tag="VHN20_11000"
     CDS             complement(1888..2187)
                     /locus_tag="VHN20_11000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019196859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase family
                     protein"
                     /protein_id="HEX2726338.1"
                     /translation="MILEIAQIDVKPGLEAEFEAGVGKAAPLFQRAKGCGGLELQRSI
                     EKPTRYRLFVRWATLEDHMVAFRGSADFQEWRKLVGHCFAQPPEVEHTVEAFRGF"
     gene            complement(2258..2725)
                     /locus_tag="VHN20_11005"
     CDS             complement(2258..2725)
                     /locus_tag="VHN20_11005"
                     /inference="COORDINATES: protein motif:HMM:NF012415.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CAP domain-containing protein"
                     /protein_id="HEX2726339.1"
                     /translation="MRLRLAITCLFLAPVLMQCAGEPSLLTNNVMLSTSDARAAAGLI
                     SSYRTAHGLSAVTVDPTLNRAAEVQARAVAQTGILSHGQFASRMSSFGIRGASAENLT
                     AGSRTVDAAIARWKGSPGHNQNLLMPEARRVGLARATTPGTGYENYWALVLSQ"
BASE COUNT          497 a          950 c          922 g          447 t
ORIGIN      
        1 gcacctcgat cgcgcggccg ctgatcgcca agaagcagat cgagatcgcc gagaaggtcg
       61 gcgccgacgc cgtggcgcat ggcgccaccg gcaaaggcaa cgaccaggtc cgcttcgagc
      121 tgtcctatta tgcgctcaag cccgacgtga ccgtgatcgc cccgtggcgc gaatgggacc
      181 tgacctcgcg cacgaggctg atcgaattcg ccgaggcgca ccagatcccg atcgccaagg
      241 acaagcgcgg cgaggcgccg ttctccgtcg acgccaacct cctgcatgcc tcctcggagg
      301 gcaaggtgct cgaggatccg gcgcaggagg tgcccgatta cgtctattcg cgcacgctcg
      361 accccgaaga ggcccccgac aagccgacct acatcacggt cgatttcgag cgcggcgacg
      421 ccgtggccat cgacggcaag cgcatgtcgc cggcaacgct gctgacgcgg cttaacgagc
      481 tcggccgcgc caacggcatc ggccggctcg atctcgtcga gaaccggttc gtcggcatga
      541 agagccgcgg catgtacgaa acaccgggcg gcacgattct ggtgcaggcg catcgcggca
      601 tcgagtcgat cacgctcgac cgcggcgcgg cgcacctcaa ggacgagctg atgccgcgct
      661 atgccgagct gatctacaac ggtttctggt tcgcgcccga gcgcgagatg ctgcaggccc
      721 tgatcgacaa gtcgcaggag ctggtgaccg gctccgtccg cctgaagctc tacaagggcg
      781 gcgtcttcgt ggtcgggcgc gacagcccgt attcgctgta cgaccaggag ctcgtgacct
      841 tcgaggaggg cgcggtcgcc tacgaccacc gcgatgcggc tggtttcatc aagctcaatg
      901 cgttgcgcct gcgcacgctc gcacaacgga agaagaagct gggcttgtaa atcgggagcg
      961 gtcaggcgcc cggcccggaa catacggcca aggttgcggg ttgaatccgg aacagccggg
     1021 gagggttcca tgcagggaaa cgtcggctta ccggctcaca ccccgtccag gacggccgcg
     1081 caggccctca aggctgccgc gccgctgctc ctgctcctcg ccgcagccgg ctcggcgcaa
     1141 gcgagatgcg cggacgcgcc gcgggccggg gtcgactgga ccggctgcac caagccgcag
     1201 ctgatgctct ccggcgacga cctctccggc gccgtgttca gcaagtcgta tttgagcgcc
     1261 accgacttcg cccgctcgaa gctgtccgca gccaggctcg acgaggcgga tgtcagcttc
     1321 gccaagttcg aagccactga cctgtccggg gcggacctga ccaaggccgt gggctggcgc
     1381 gtcaacttca cgcgtgccaa cctgaacaaa gccaggctgc acatggcgca gatgatccgt
     1441 tcgagcttcg tgcaggcgaa atttgccggc gcggatttgt ccaagtcgga aatgaaccgc
     1501 tccgatttcg gcggcgccga cctgagcggc gtcgacatgt cgaaagcgga actggctcgc
     1561 gtcgtcttca ccaatgccag gctgtcgggc gcgaatttca gcaacgccaa tctgtcgcgc
     1621 gccaacctga ccggggtcga tctcgacggc gccaacctga cgggcgccta tctcttcctg
     1681 acaaatgtgc gcggcgccaa tctgagccgc accagcggcc tgacgcaggc gcaactcgac
     1741 ctcgcctgcg gcaccgcaga gacgaagctc ccgtcggctc ttgcgcagcc gaaaggctgg
     1801 ccttgcaccg acgacgatga atgaggcgaa ctgcaatacg gaattgcgcg accgcggctc
     1861 cgctattccc tgttcgccgt cgcctgttca aaaaccgcgg aacgcttcga ccgtgtgctc
     1921 gacctcgggt ggctgcgcga agcagtggcc gacgagcttg cgccattcct gaaaatcggc
     1981 cgacccgcgg aatgcgacca tgtggtcttc gagcgtcgcc cagcgcacga acaggcggta
     2041 gcgcgtcggt ttctcgatgg accgctgcaa ctccaggccg ccgcatccct tggcgcgctg
     2101 gaacagcggc gccgccttgc cgacgccggc ctcgaactcg gcctcgaggc ccggcttcac
     2161 gtcgatctgc gcgatttcga ggatcatcgg cgttgctacc cttgaaagca ttttccttgc
     2221 cgggagacct gtgcgccgct ccgccgccgg acgcaagcta ctgcgagaga acgagcgccc
     2281 agtaattctc gtatccggtg ccgggggtcg tggcgcgggc aagcccgacg cgccgcgcct
     2341 ccggcatgag caggttctgg ttgtggccgg gcgagccctt ccagcgagcg atggcggcat
     2401 cgacggtgcg cgaccccgct gtcaggttct cggccgacgc gccgcggatg ccgaaggacg
     2461 acatgcggct ggcgaattgg ccgtgcgaga ggatgccggt ctgcgccact gcgcgcgcct
     2521 gcacctccgc ggcccggttg agggtcgggt cgacggtcac cgcggacagc ccatgcgctg
     2581 tccggtagct gctgatcagc ccggccgccg cgcgcgcatc cgacgtgctc aacatgacgt
     2641 tgttggtcag cagcgaaggc tcgcctgcgc actgcatcag cacgggcgca aggaacaggc
     2701 acgtgatcgc gaggcgaaga cgcatgaaag ccccctgttg ttggaattct tgtcgggccc
     2761 ctaaaggggc ggccttctgc ctagcgaaga tcgcctgcaa aagtaaagat gccccg
//
LOCUS       DATAIQ010000661         2181 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_404100, whole genome shotgun sequence.
ACCESSION   DATAIQ010000661 DATAIQ010000000
VERSION     DATAIQ010000661.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2181)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2181)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2181
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_404100"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..240
                     /locus_tag="VHN20_11010"
     CDS             <1..240
                     /locus_tag="VHN20_11010"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020088019.1"
                     /note="adds enolpyruvyl to UDP-N-acetylglucosamine as a
                     component of cell wall formation; gram-positive bacteria
                     have 2 copies of MurA which are active; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HEX2726340.1"
                     /translation="MGAEIDVHGRSAIVHGPRALTGAQVMATDLRASMSLILAGLAAE
                     GETEVLRVYHLDRGYERLEEKLSAVGAAIERVGGG"
     gene            complement(237..665)
                     /locus_tag="VHN20_11015"
     CDS             complement(237..665)
                     /locus_tag="VHN20_11015"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF025054.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX2726341.1"
                     /translation="MTGVEIRDANAGDAPGLVGLIAQIGFSVDDCGVAERLGDLAAVG
                     EPVIVAESSGILVGMLNWHVMPTIHRSRCVGRIVALVVDEAARGQGIGTRLTAEAEQR
                     MRMRGCEKLEVTSNLVLERAHAFYERYGLERSSYRFAKNL"
     gene            complement(662..1972)
                     /locus_tag="VHN20_11020"
     CDS             complement(662..1972)
                     /locus_tag="VHN20_11020"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX2726342.1"
                     /translation="MKRIFAAAVIAAAAPALAQEPMTVIHAGTLMAEPGKPPLRNATV
                     VIRGRTIEAVQNGFVDVPGARVVDLRTATVMPGLIDSHVHLIGLDDRMQRRLLESTRD
                     NEDEAYTGVHNARKTLLAGFTTVRDLGAEPKTITSLRDAINAGQFAGPTILAAAAGVA
                     VTGGHGDVNLVNRDLDSVLKPKAVHVCDGADDCRRATREQISEGADVIKLKASGGVLS
                     NVPGGLAQQMMDDELRAVVLTARTFGRKVAAHAHGVDGVNAALRAGVDSIEHGTFTND
                     ETFRLYRQTGAYYVPTLLAPAAALADGQRGALTPAQFEKAREAAGNAEKSFARAIREG
                     VKIAFGTDTGVSPHGRNAEEFALMVKNGMQPAAAIRSATVTAAALLGIDGRVGTIAPG
                     KDADIIAVDGDPIANIRELESVDFVMKHGRVHKLGGKRQLTDVD"
     gene            complement(1986..>2181)
                     /locus_tag="VHN20_11025"
     CDS             complement(1986..>2181)
                     /locus_tag="VHN20_11025"
                     /inference="COORDINATES: protein motif:HMM:NF016196.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF445 family protein"
                     /protein_id="HEX2726343.1"
                     /translation="IAGMAASYGGSIVKLVSETVRRWDAQTVTDRLESAVGRDLQYIR
                     INGTLVGGSVGLVLHAIDAI"
BASE COUNT          316 a          725 c          764 g          376 t
ORIGIN      
        1 atgggcgccg agatcgacgt ccacggtcgc tcggcgattg tccatggccc gcgagccttg
       61 accggcgcgc aagtcatggc gaccgacctt cgagcgtcga tgagcctgat cctcgccggc
      121 cttgccgccg agggcgagac cgaggtgctc agggtctacc acctcgaccg cggctacgag
      181 cggctcgagg agaaattgag cgcggtcggg gcggcgatcg agcgggtcgg cgggggctag
      241 aggttcttgg cgaagcgata gctgctgcgc tcgaggccgt agcgctcgta aaaggcatgg
      301 gcgcgttcaa gcacgaggtt gctcgtcacc tccagctttt cgcacccgcg catgcgcatc
      361 ctttgctcgg cttcggccgt caggcgggtt ccgatgccct ggccgcgagc cgcctcatcg
      421 acgaccaggg cgacgatccg gccgacgcag cgcgagcggt ggatggtcgg catgacgtgc
      481 cagttcaaca tgcccacgag aattccggaa gattccgcga cgatcactgg ttcgccgacc
      541 gccgcaagat cgccaagccg ctcggccaca ccgcaatcat ccaccgaaaa gccgatctgg
      601 gcgatcaagc caaccaggcc cggtgcgtcg ccggcattgg catcgcgaat ctcaacccca
      661 gtcaatcgac atccgtcagc tggcgcttgc cgccgagctt gtggacgcgg ccgtgcttca
      721 tcacgaaatc gacgctttcg agctcgcgga tgttggcgat cgggtcaccg tcgacggcga
      781 tgatgtcggc gtccttgccc ggcgcaatcg tcccgacccg accgtcgatg ccgagcaacg
      841 cggccgcggt cacggtggcc gagcggatcg cagcggccgg ctgcatgccg ttcttgacca
      901 tcagcgcgaa ctcctcggcg ttgcggccgt gcgggctgac cccggtgtcg gtcccgaaag
      961 cgatcttcac gccctcgcgg atcgcccgcg cgaagctctt ctcggcattg ccggcggcct
     1021 cgcgtgcctt ctcgaactgg gccggggtga gggccccgcg ctggccgtcg gccagcgccg
     1081 ccgccggtgc gagtagggtt ggcacatagt aggcgccggt ctggcggtag aggcggaagg
     1141 tctcgtcgtt ggtgaaggtg ccgtgctcga tcgaatcgac cccggcgcgg agcgcggcat
     1201 tgactccgtc gacgccgtgg gcgtgggcgg cgaccttgcg gccgaaggtg cgcgcggtga
     1261 gcacgaccgc gcgcagctcg tcgtccatca tctgctgggc aaggccgccc ggcacgttgc
     1321 tcagcacgcc gcccgaggcc ttgagcttga tgacatccgc gccctcggag atctgctcgc
     1381 gggtcgcgcg gcggcaatcg tcggcgccgt cgcagacatg caccgctttc ggcttcagca
     1441 cgctgtcgag gtcgcggttg acgaggttga cgtcgccgtg gccgccggtg accgcgactc
     1501 cggccgctgc tgcgaggatg gtcggcccgg caaactggcc ggcattgatc gcgtccctca
     1561 gcgaggtgat ggtcttgggc tcggcgccga ggtcgcgcac cgtggtgaag ccggcgagca
     1621 gggttttccg ggcgttgtga actccggtgt aggcttcgtc ctcattgtcg cgggtcgatt
     1681 cgagcaggcg tcgctgcatc cggtcgtcga ggccgatcag gtggacgtgg gaatcgataa
     1741 gcccgggcat gaccgtcgcc gttcgcaggt cgacgacgcg ggcgccggga acatcgacga
     1801 agccattctg gactgcctcg atcgttcggc cgcggatcac caccgtggcg ttcctgagcg
     1861 ggggcttgcc cggctcggcc atcagcgttc cggcgtgaat cacggtcatc ggctcctggg
     1921 ccagcgccgg cgcggcggcc gcgatgactg ctgctgcgaa tatgcgcttc attgtcattt
     1981 ctccctcaga tggcgtcgat ggcgtggagc accaggccga cgctgccgcc gaccagggtg
     2041 ccgttgatgc ggatgtactg gaggtcgcgg ccgaccgccg attcgagccg gtcggtgacg
     2101 gtctgcgcgt cccaccggcg cacggtctcg ctgaccagct tgacgatcga gccgccgtag
     2161 ctggccgcca tccccgcgat t
//
LOCUS       DATAIQ010000662         2366 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_154607, whole genome shotgun sequence.
ACCESSION   DATAIQ010000662 DATAIQ010000000
VERSION     DATAIQ010000662.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2366)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2366)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2366
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_154607"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1449)
                     /locus_tag="VHN20_11030"
     CDS             complement(<1..1449)
                     /locus_tag="VHN20_11030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017485986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HEX2726344.1"
                     /translation="MKTRTRTSPAKSQKAGAAQRTDAAASFVPGPRIYNLFPLLVGRV
                     SAWRAELPRIASLGFDWVYVNPFHQTGGSGSLYAVKDLSRLDPRFRDEGAGSDDDQIR
                     AFTEDAASHGLKIMADLVINHTANDAPLAAQRPDVYIHDERGRIASPFAIDPDDPTKK
                     TVWGDLAELDYHRRTARDFLVPYWDAYIARMQGLGIRGFRCDAAYKVPAEVWRALIGP
                     AKSRDRGCLFAAETLGCTLDEAKATAGAGFDYLFNSFAWWDLEAPWALENYEALRLSA
                     PSIAFPENHDMARLAGKAGEDPAAIAATLRMRYALAAFFSSGVLMPIGYEWGYRRDLH
                     VVETSPAQREHKTGIDISDYVAAVNRLRAELPAVNVEGAQWRLSAVGAPYLALLRFDH
                     GHPGAARHATLVLTNPGAAPVSVDPGPLLARTGGYLADFIDVTPGEAPLAFKPGTRIT
                     LAPDVVRIFAAERADVKTLPARSKTPDGEGRVI"
     gene            complement(1446..>2366)
                     /locus_tag="VHN20_11035"
     CDS             complement(1446..>2366)
                     /locus_tag="VHN20_11035"
                     /EC_number="2.4.1.25"
                     /EC_number="5.4.99.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015951199.1"
                     /note="amylomaltase; acts to release glucose from
                     maltodextrins; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-alpha-glucanotransferase"
                     /protein_id="HEX2726345.1"
                     /translation="PEAWANAVTRFEAMAAPHLVGIDEIDAPDANDRYMLLQTLLGAW
                     PNELLEHESEDAIAAFRGRVEEYARKALREAKRHTSWVHVNEAYEEATAALLRALLDP
                     AGGFLRAFRPLAQRLAYTGMLTGLARTALKATLPGVPDTYQGTEFWDLSLVDPDNRRP
                     VDYAARAEALAREPDFAALLQGWRDGRVKQQVLARLLADRAAAPDFYAKADYQPLAVE
                     GAKSRHVLAFRRSLGSEALIVAVPRLVGRFTEGENPPLGRAFWEDTGVMAGSGRWREV
                     VTGAELAGDERLKAGELFSTFPIAVLRTLQ"
BASE COUNT          350 a          808 c          856 g          352 t
ORIGIN      
        1 gatgacgcgg ccttcgccgt ccggcgtctt gctgcgcgcg ggcagggtct tcacgtcggc
       61 gcgctcggcc gcgaagatgc gcacgacgtc gggcgcgagc gtgatgcgcg tccccggctt
      121 gaaggcgagt ggcgcttcgc ccggggtgac gtcgatgaaa tcggcgaggt agccgccggt
      181 gcgcgcgagc agcgggccgg gatcgacgct caccggcgcg gcacccggat tggtcagcac
      241 gagcgtggca tggcgcgccg cgcccggatg gccgtggtcg aagcgcagca aggcgaggta
      301 gggcgcaccg acggccgaca ggcgccattg cgcgccttcg acattcacgg ccgggagctc
      361 cgcgcgcagg cggttcacgg cggcgacgta atcggaaatg tcgatgccgg tcttgtgctc
      421 gcgctgcgcg ggtgaggtct cgaccacgtg caggtcgcgc cgatagcccc attcgtagcc
      481 gatcggcatc agcacgccgc tcgagaagaa ggccgcgagg gcatagcgca tcctgagcgt
      541 ggcggcgatc gcggccggat cctcgccagc cttgccggcg aggcgggcca tgtcgtgatt
      601 ctcggggaac gcgatcgacg gcgccgagag ccgcagcgcc tcgtagttct cgagcgccca
      661 gggcgcctcg agatcccacc aggcgaagct gttgaacagg tagtcgaaac cggcgcccgc
      721 ggtggccttg gcctcgtcga gcgtgcagcc gagcgtctcg gcggcgaaca gacagccgcg
      781 gtcgcggctc ttggccgggc cgatcagcgc gcgccagacc tccgcgggaa ccttgtaggc
      841 ggcatcgcag cgaaagcccc tgatgccgag gccctgcatg cgcgcgatat acgcgtccca
      901 gtaggggacc aggaagtccc gggcggtgcg gcggtggtag tccagctccg ccaggtcgcc
      961 ccagacggtc ttcttcgtcg ggtcgtccgg atcgatcgcg aacgggcttg cgatgcggcc
     1021 gcgctcgtca tgtatgtaga cgtccggacg ctgcgccgcg agcggcgcat cgttggcggt
     1081 gtgattgatg acgaggtcgg ccatgatctt gaggccgtgc gaggccgcat cctcggtgaa
     1141 ggcgcggatc tggtcgtcgt cgctgccggc gccctcgtcg cggaagcgcg gatcaaggcg
     1201 cgagaggtcc ttgaccgcgt ataggctgcc cgagcccccg gtctggtgga acgggttgac
     1261 gtagacccag tcgaagccga gcgaggcgat gcgcggcagc tcggcccgcc aggcggagac
     1321 gcggccgacg agcagcggga agaggttgta gatgcgcggc ccgggcacga atgacgcggc
     1381 cgcgtccgtt cgttgcgcag cccccgcctt ctgcgacttc gcagggctcg ttcttgttcg
     1441 cgttttcatt gcagcgtcct caggacggca atgggaaagg tagaaaacag ttccccggcc
     1501 ttcaatcttt catcccccgc gagctcggcg ccggtcacca cttcgcgcca gcgcccggag
     1561 ccggccatca cgcccgtatc ttcccagaac gcccgaccga gcggcgggtt ctcgccttcg
     1621 gtgaaccggc cgacgaggcg cggcaccgcg acgatcaggg cctcgctgcc gagggagcgc
     1681 cgaaaggcca gaacgtggcg gcttttcgcc ccctccaccg ccagcggctg ataatccgcc
     1741 ttggcgtaaa agtccggagc tgccgcccgg tccgcgagca gccgcgccag gacctgctgc
     1801 ttgacgcggc cgtcgcgcca gccctgcagc agggccgcga aatccggctc ccgggcaagc
     1861 gcctcggccc gggcggcgta gtcgaccggc cgccggttgt ccggatcgac gagcgacagg
     1921 tcccagaact cggtgccctg gtaggtgtcg ggcacccccg gaagggtcgc tttgagcgcc
     1981 gtgcgcgcga ggcccgtgag catgcccgta tacgccagcc gctgcgccag cggccggaag
     2041 gccctcagga agccgcccgc cggatcgaga agggcgcgca gcaaggccgc cgtcgcctcc
     2101 tcgtaagcct cgttgacgtg gacccagctc gtgtgccgct tggcctcgcg cagcgccttc
     2161 cgggcatact cctcgacgcg gccgcggaac gccgcaatgg catcctcgga ctcgtgctcc
     2221 agcagctcgt tcggccaggc gccgagcagc gtctgcagca gcatgtaacg gtcgttggcg
     2281 tcgggggcgt cgatctcgtc gatgccgacg agatgcggcg cggccatggc ctcgaaccgt
     2341 gtcacggcgt tggcccacgc ctccgg
//
LOCUS       DATAIQ010000663         2241 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_61846, whole genome shotgun sequence.
ACCESSION   DATAIQ010000663 DATAIQ010000000
VERSION     DATAIQ010000663.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2241)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2241)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2241
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_61846"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..658
                     /locus_tag="VHN20_11040"
     CDS             <1..658
                     /locus_tag="VHN20_11040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012779024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX2726346.1"
                     /translation="SRIFETLYALAITGELWAHLWATVWRVAAGFALGSAAGIVLGAV
                     SGASETARRLLDPTLQALRAIPSLAWVPLFILWLGIFEASKVTLIAVGAFFPVYLGIA
                     GGILSVDRKLIEVGRVFRLSRLHLARRILLPAVLPEAIIALRSGLGLCFMFVVAAEFM
                     GASEGLGYLLVDGQQLGKPDQILASIIAFAVVGQVADAGLVLLTRPLTRWQDVARDRL
                     "
     gene            659..1447
                     /locus_tag="VHN20_11045"
     CDS             659..1447
                     /locus_tag="VHN20_11045"
                     /EC_number="7.6.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2726347.1"
                     /translation="MLELERLSKTYADGTRALADITLGVQESEIVALIGGSGCGKTTL
                     LRLLAGLDHASAGNIRLDDEAVSEPHPAIGIVFQEPRLLPWLSVADNVGFGLADRPAA
                     ERRARVGHALEKVGLAEHARRWPKELSGGQQQRVAIARAFVANPKVLLLDEPFSALDA
                     FTRASLHEHLLGLWDESRPTVLMVTHDVQEAVTLADRAVVMQPKPGRIYDELPLGLAR
                     PRDKTSPAFESATRRVLAALDRSLQDVDKPRHGERTQQDAGLWW"
     gene            1549..2055
                     /locus_tag="VHN20_11050"
     CDS             1549..2055
                     /locus_tag="VHN20_11050"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019906384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HEX2726348.1"
                     /translation="MDATALRALQAPLKDKYRETPDAAVITLKAQGTLDDQHIACKVE
                     TGRALAVAGLHPATGGSGAELCSGDMLLEALVACAGVTLKAVATALEIPLRNGVVKAE
                     GDLDFRGTLGVDKTAPVGFRAIRLDFEIDTDAPQDKVDQLLKLTERYCVVFQTLNNKP
                     QLSVAVSR"
BASE COUNT          328 a          785 c          740 g          388 t
ORIGIN      
        1 gagccgcatc ttcgagacgc tttatgcgct ggcgatcacc ggagagctgt gggcgcatct
       61 gtgggccacc gtgtggcgcg tggcggcagg ttttgccctc ggcagcgccg ccggcatcgt
      121 tctcggcgcc gtatcgggcg cgagcgagac agcgcggcgg ctgctcgacc cgacgctgca
      181 ggcgttgcgc gccatcccgt cgctcgcctg ggtgccgctc ttcatcctgt ggctcggcat
      241 tttcgaagcg tcgaaggtga cgctgatcgc ggtcggagcg ttcttcccgg tgtatctcgg
      301 catcgcgggg ggcattctct cggtcgaccg caagctcatc gaagtcggcc gcgtctttcg
      361 cctgtcgcgg ctgcacctcg cccgccgcat cctgctgccg gccgtgctgc cggaggcgat
      421 catcgcgctc cggtcaggtc tcggcttgtg cttcatgttt gtcgtggccg ccgagttcat
      481 gggcgcgtcc gaggggctcg gctaccttct cgtcgacggc cagcaactcg gcaagcccga
      541 tcagatcctg gccagcatca tcgcctttgc cgtcgtcggg caggtcgcag acgccggcct
      601 cgtgctgctg acgcgccccc tcacccgctg gcaggacgtg gcgcgggatc gcctgtaaat
      661 gctcgagctc gaacgtctct cgaaaaccta tgccgacggc acgcgcgccc tcgccgacat
      721 cacgctcggc gtgcaggaat cagagatcgt cgcgctgatc ggcggctccg gctgcggcaa
      781 gaccacgttg ctgcgcctac tcgccgggct cgatcacgcc agcgcgggca acatccggct
      841 cgatgacgaa gccgtttccg agccgcatcc ggccatcggc atcgtcttcc aggagccgcg
      901 gctgctgccc tggctcagcg tcgccgacaa tgtcggcttc gggcttgcgg accgtcctgc
      961 ggccgagcgg cgcgcccgcg tcggccacgc gctggagaag gtcggtctcg ccgagcatgc
     1021 caggcgctgg cccaaggagc tgtcgggcgg ccagcagcag cgcgtcgcga tcgcccgcgc
     1081 cttcgtcgcc aatccgaagg tgctgctgct cgacgagccg ttctcggccc tcgacgcgtt
     1141 cacgcgcgcc agcctgcacg agcacctgct cggcctgtgg gatgagagcc gcccgaccgt
     1201 gctcatggtc acccatgacg tgcaggaggc cgtcaccctc gccgaccgcg ccgtggtgat
     1261 gcagccgaag ccgggccgca tctacgacga gctgccgctg ggccttgccc gcccgcgcga
     1321 caagacctcg ccggccttcg aatccgcgac gcggcgcgtg ctcgccgcgc tcgaccgctc
     1381 gctccaggac gtcgacaagc cgcgacacgg cgagcgcacg cagcaggatg cggggctttg
     1441 gtggtgatcg ggcgcgtgcc gacgggagaa tgttcgcgac tttcctccgc tattcgccac
     1501 tctccattcg ccctatgatg tgaccgatca aaacaggaaa cgacggaaat ggacgcaacc
     1561 gcgttgcgcg cgctgcaggc gccgctcaag gacaagtacc gcgagacgcc cgatgcggcc
     1621 gtgatcacgc tcaaggcgca gggtacgctc gacgaccagc acatcgcctg caaggtcgag
     1681 accggccggg ccctggcggt cgccggcctg catcccgcca ccggcggctc gggcgcggag
     1741 ctctgctccg gcgacatgct gctggaagcg ctggtggctt gcgcgggcgt caccctgaag
     1801 gcggtggcca cggctctcga aatcccgctg cgcaacggcg tggtgaaggc ggaaggcgat
     1861 ctcgacttcc gcggcaccct cggcgtcgac aagacggcgc cggtcggctt ccgggcgatc
     1921 cgtctcgatt tcgagatcga caccgacgcg ccccaggaca aggtcgacca gctgctcaag
     1981 ctgaccgagc gctattgcgt cgtgttccag accctcaaca acaagccgca gctgagcgtc
     2041 gccgtcagcc gctgagctga gcttcgaccg ggcgattacc cgcccttgcg gggccgcgtc
     2101 ccgtgtttgt attttggaat gagcacagac tgctgcgcgt caagcctgct ggagcggatc
     2161 gattcagatc gaaccgatcc cgctctctct tattgagtcg catgatcttt ttcggcaaag
     2221 gcggtgccgg ctttaccgga t
//
LOCUS       DATAIQ010000664         2584 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_34573, whole genome shotgun sequence.
ACCESSION   DATAIQ010000664 DATAIQ010000000
VERSION     DATAIQ010000664.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2584)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2584)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2584
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_34573"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..183)
                     /locus_tag="VHN20_11055"
     CDS             complement(<1..183)
                     /locus_tag="VHN20_11055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018390075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEX2726349.1"
                     /translation="MLFNRRTFVTTLLASVSANFPGKTSAQQIKGMKIIAPANPGGGY
                     DQLARAIQDVMNVEKLA"
     gene            590..724
                     /locus_tag="VHN20_11060"
     CDS             590..724
                     /locus_tag="VHN20_11060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726350.1"
                     /translation="MLREAGSSGYHPDSKERAMDLAGLVVFASKLFIAAGAAAAITAR
                     "
     gene            779..1504
                     /locus_tag="VHN20_11065"
     CDS             779..1504
                     /locus_tag="VHN20_11065"
                     /inference="COORDINATES: protein motif:HMM:NF018028.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HEX2726351.1"
                     /translation="MSAQLIDLCGWAFLASLVGLLLVSVAPGTFGLASAFPQHLTCGE
                     LSAPPPGIEPPAGLSPNLIRRCSKSFLGFPFRNEVTLTEERERGALAGDWVVTTRRSV
                     TYVVGPDLRPVDAFDLDSIFWLAYLAYVVIAQGLYRATLGKRLLRLRVVDRYGVRPGL
                     RAAAIRNLVLNGPILLGLALYALMHWVSFRNPTPLLWLAGALALCNLAIVVEVWLTAR
                     KGKPSIHDRIAGTRVIRLPGRSP"
     gene            1862..>2584
                     /locus_tag="VHN20_11070"
     CDS             1862..>2584
                     /locus_tag="VHN20_11070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX2726352.1"
                     /translation="MGRFTRGLRRKRSAWLLPVAVTLTLAPDFAPPSVAAAATDLDAL
                     HQATLRDPANHELTFEYVRVAKAAGDYEAAIGALERLLFYNPDLSRVKYEVGALYYRL
                     GSFEMAARYFRDALASPSLDPVTRARVDAYLPQAEKELSPSRWSGFFQTGLRYQSNAS
                     FTPTGEVLRLGGQDFLLGPSARRGPDWNWFGIAGISHDYDLQNQRGDTIETRVLGYGV
                     KQFRFGELDLGFVEASFGPRLAL"
BASE COUNT          374 a          908 c          838 g          464 t
ORIGIN      
        1 agcgagcttc tccacgttca tcacgtcttg gattgctcgc gccaactgat catagccgcc
       61 gccgggattt gcgggggcga tgatcttcat gccctttatc tgctgggcgg atgtcttacc
      121 ggggaagttg gcagaaacgg aagcgagaag cgtcgtgacg aatgtgcggc gattgaagag
      181 catagcgtca cctccagagg cgagcgtcgc cagcagaact tagggaaact cccctgcttc
      241 cttgttgttc ctcgcacaat cggccgtgcc gagaacgagt gcggcatcgt cgacccctgg
      301 gcgcctaggg catcgctgcc cagtcggtgc ggcacaccac gaggctgcgc tcctcgaggt
      361 aggccaggac gcgtcgtgct cggccgaggg agctggttcc gtaagcggcc gcgactgcct
      421 cctccgatgg ggacggggct ctctcgattg ccgcacgggc aagcaaaagg aacacgccgt
      481 gcaggtcctc cgccaaggtg gcggtgcacg gcattgcctt cgaccattcc gggctgtcct
      541 ggaccgtctg acccgcctct gcccgcacga tgagacgcga gccggctcca tgttgcgcga
      601 ggccgggtcg agcggctatc accctgacag caaagagcgc gccatggatc tcgccggcct
      661 cgtcgtgttc gcctcgaagc tcttcatcgc cgccggcgcc gccgcggcga tcacggcgcg
      721 ctagcggatg gcgtcgcagg ccgcagcgtc gggcgggatc gccggcttct ggatacgctt
      781 gtcagcgcag ctcatcgatc tgtgcggatg ggccttcctc gcaagtctcg tcgggctgct
      841 gctcgtctcc gtcgcacccg gcaccttcgg ccttgcgagc gctttcccgc agcatctgac
      901 ctgcggcgag ctgagcgcgc cgccgcccgg gatcgagccg ccggccgggc tgtcgccgaa
      961 cctgatccgg cgctgctcga aatccttcct cggattcccg ttccgcaacg aggtcaccct
     1021 caccgaggag cgtgagcgcg gcgcgctggc aggggactgg gtggtgacga cgaggcggag
     1081 cgtgacctat gtggtcggcc ccgacctcag gcccgtcgac gcgttcgacc tcgattcgat
     1141 cttctggctc gcctatctcg cctatgtcgt gatcgcgcag gggctttacc gcgcgaccct
     1201 cggcaagcgc ctgcttcgcc tgcgcgtcgt cgaccgctac ggcgtgcggc cgggcctgcg
     1261 cgccgccgcg atccgcaacc tcgtcctgaa cgggccgatc ctcctcgggc tcgccctcta
     1321 tgcgctgatg cattgggtct cgttcagaaa cccgacgccg ctgctctggc tcgccggcgc
     1381 gctcgcgctc tgcaacctcg ccatcgtcgt cgaggtctgg ctgaccgcgc gcaagggcaa
     1441 gcccagcatc cacgatcgca tcgcgggcac gcgcgtgatc cgcctcccgg gtcgatcgcc
     1501 ttgaccgagc gcctggtaag aaggcgcgcc gcgttgacct tgccctcgtc ctcctcagga
     1561 tgaggagcgc gggagaagct gctccgggcg cgatgaccaa gatcgaccaa gcgcgcgctg
     1621 cgctgcaatc gtcttcggct gcgacgattt ccgtcccggg cgccgtgctg gccggcgacg
     1681 acgataaagt cgtgggcttt ctttcctgta ttgagccgcc gaataccgcc ccgacgcgcc
     1741 cactgattcg catttacaaa gtgttgctca aaaacacttt gaccgcccgc gcccgcttgc
     1801 tagcttcgct caagttttcg tggcgcgaac ccggaagggt tcggcgtgtg cgggggacgt
     1861 cgtgggacga ttcacccgag gcctgcgtag gaaacgttcc gcctggctcc tgcctgtcgc
     1921 ggtcacgctg actctcgctc cggatttcgc gccgcccagc gtcgccgccg cggccaccga
     1981 cctcgacgcg ctgcatcagg cgacgctgcg cgatcccgcc aatcacgagc tcaccttcga
     2041 atacgtgcgg gtggcgaagg cggccgggga ctacgaggcc gccatcggcg cgctcgagcg
     2101 tctcctgttc tacaatcccg atctgtcgcg cgtgaaatac gaggtcggcg cgctctatta
     2161 ccgcctcggc tccttcgaga tggcggcgcg ctatttccgc gacgcgctcg ccagccccag
     2221 tctcgacccg gtcacccggg cccgcgtcga cgcctatctg ccgcaggcgg agaaggagct
     2281 gtcgccgagc cgctggtccg gcttcttcca gacggggctc cgctaccagt cgaacgccag
     2341 cttcacgccg accggggagg tgctgcgtct cggcggccag gatttcctgc tcggcccgtc
     2401 ggcgcgccgc ggccccgact ggaactggtt cggcatcgcc gggatcagcc acgactacga
     2461 cctgcagaac cagcgcggcg acacgatcga gacgcgcgtc ctcggctacg gggtcaagca
     2521 gttccggttc ggcgagctcg acctcggctt cgtcgaggcg agcttcggcc cgcgcctggc
     2581 gctg
//
LOCUS       DATAIQ010000665         2044 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_61887, whole genome shotgun sequence.
ACCESSION   DATAIQ010000665 DATAIQ010000000
VERSION     DATAIQ010000665.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2044)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2044)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2044
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_61887"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(270..2042)
                     /locus_tag="VHN20_11075"
     CDS             complement(270..2042)
                     /locus_tag="VHN20_11075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012494503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase C-terminal
                     domain-containing protein"
                     /protein_id="HEX2726353.1"
                     /translation="MDDVLFLLNDVFRMERHNNLPGFADATPDVVEAILAEGAKLCEE
                     VLAPVNRAGDLEGCTRHGDGRVTTPAGFKKAYDAYAQGGWIGLAAPGEYGGQGLPYTL
                     NVAIQEFASAANMALVMYPGLTMGAIAALVVHGSDEQKSTYLPKMIDGSWAGTMNLTE
                     PHCGTDLGLIKTKAVPNGDGTYAITGTKIFISAGEHDLAENIVHLVLARIEGAPEGTK
                     GISLFIVPKLLVNADGGLGERNGVSCGSIEHKMGIHGNATCVMNYDGAKGWLVGEANR
                     GLNAMFVMMNEARLAVGVQGLALSDVAYQNAVQYAKDRLQGRALTGAKSPDKPADPII
                     VHADIRRNLLAIKAFNEAARALVLWTALKSDVAHRSEDEKERQSADDHMGLMTPVLKG
                     VLTDFGFDNAVRAQQVYGGHGYIAESGMEQFVRDARIAQIYEGANGIQAMDLVGRKLP
                     REGGRAVMAFFNEVGAFCQEQAGDDVMKPYVVPLQQALGHLQQATMWFMQNAMARPDN
                     AGAGAYDYMHLMGLVAMGYMWARMAKTAHEKKGQGNGVAARMDAKLLTGRFFMERMLP
                     ETGAHLARISSGADAVMTLPADMF"
BASE COUNT          317 a          684 c          669 g          374 t
ORIGIN      
        1 gcaacgccgt ctcggcgagg cgcaacgcgg taacctcgtg cagcgacccg tcgggcttgc
       61 cgcgcccgcg cggagtgcgg acggcatcat agatataagc gtcgggcata tttggtctcc
      121 agattccctc tcccgcgtgc gagagagggt tggggcgagg ggaaggtcgc gctgtccctc
      181 gcccggtccg cggagtttat cgtcgggcgg ggctatggcc cgacccgatg gcagactcga
      241 cctgtcccgc gtcgcggaag aggcttgggt caaaacatgt ccgccggcag ggtcatcacg
      301 gcgtcggcgc cgctcgagat gcgggccaga tgggcacccg tctccggcag catgcgttcc
      361 atgaagaagc gtccggtgag cagcttggcg tccatcctgg ccgccacgcc gttgccttgc
      421 cccttcttct catgcgccgt cttggccatc ctcgcccaca tatagcccat ggcgacgagg
      481 cccatcaggt gcatgtagtc gtaagcgccg gcgccggcat tgtcgggccg agccatggcg
      541 ttctgcatga accacatggt ggcctgctgc aggtgaccga gtgcctgctg cagcggcacg
      601 acatagggct tcatcacgtc gtcgccggcc tgctcctggc agaaggcgcc aacctcgttg
      661 aagaaggcca tcaccgcgcg gccgccctcg cgcggcagct tgcgcccgac cagatccatg
      721 gcctggatgc cgttggcacc ctcatagatc tgcgcgatgc gggcgtcgcg cacgaactgc
      781 tccatccccg attcggcgat gtagccgtgg ccgccataga cctgctgcgc cctgacggcg
      841 ttgtcgaagc cgaaatcagt aaggacgccc ttcaggaccg gggtcatcag ccccatgtgg
      901 tcgtccgccg actggcgttc cttctcgtcc tcggaacggt gcgcgacgtc ggatttcaac
      961 gccgtccaca gcacgagggc ccgcgccgcc tcattaaaag ccttgatcgc gaggaggttg
     1021 cggcggatgt cggcgtggac gatgatcgga tcggcgggct tgtccgggct cttggcgccg
     1081 gtcaaggcgc ggccctgcag gcggtccttg gcgtattgca cggcgttctg ataggcgacg
     1141 tcggacaagg cgagcccctg caccccgacc gcgagccgcg cctcgttcat catcacgaac
     1201 atggcgttga gcccgcgatt ggcctcaccg acgagccagc ccttggcgcc gtcgtagttc
     1261 atcacgcagg tggcgttgcc gtggatgccc atcttgtgct cgatcgagcc gcacgacacg
     1321 ccattgcgct cgccaaggcc gccatccgcg ttgaccagaa gcttcggcac gatgaacagc
     1381 gagatgccct tcgttccttc cggggcccct tcgatgcgcg ccagaaccag gtggacgatg
     1441 ttctcggcga ggtcgtgctc gccggccgat atgaagatct tcgtcccggt gatcgcgtag
     1501 gtgccgtcgc cgttcggcac cgccttggtc ttgatgaggc cgagatcggt gccgcaatgc
     1561 ggctcggtca ggttcatcgt gccggcccag ctgccgtcga tcatcttcgg cagataggtg
     1621 gacttctgct catccgagcc gtgcaccacg agcgcggcga tggcgcccat cgtcagaccg
     1681 ggatacatga ccagcgccat gttggcggcc gacgcgaatt cctggatggc gacgttgagc
     1741 gtgtacggca ggccctgccc gccgtattcg ccgggcgcgg ccagaccgat ccagccccct
     1801 tgggcgtagg cgtcgtatgc tttcttgaag ccggccggcg tggtgacgcg gccatcgcca
     1861 tgacgcgtgc atccttcgag atcgccggcg cgattgaccg gcgccagcac ttcctcgcag
     1921 agcttcgcgc cttcggcgag gatcgcctcg acgacgtcgg gcgtggcgtc ggcgaacccc
     1981 ggcagattgt tgtgccgctc catccggaag acgtcgttca gcaggaacaa cacgtcgtcc
     2041 acag
//
LOCUS       DATAIQ010000666         3337 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_34653, whole genome shotgun sequence.
ACCESSION   DATAIQ010000666 DATAIQ010000000
VERSION     DATAIQ010000666.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3337)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3337)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3337
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_34653"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1623)
                     /locus_tag="VHN20_11080"
     CDS             complement(<1..1623)
                     /locus_tag="VHN20_11080"
                     /inference="COORDINATES: protein motif:HMM:NF012876.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0098561 - methyl accepting chemotaxis
                     protein complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX2726354.1"
                     /translation="MALLAPIACLSLLLLALVGYQAAVTWTKYGEVRAMQEFDGGANK
                     FIAGLFEVLMERLATNNGLQAPNPASAETLREIERRRAVVAQNFDAGYAVLEKFEFAN
                     KQALLKDLKTALDAANQARRQADQALKVPRDQRDETLRKNFIPIITASVNASLKVWFA
                     ALHEAAASDPVLARLAVVKEIGWRMRDIAGFERSNIAAAISSGAPMPADRMAANAEVR
                     SRVDLLWQQLDNLTADAATSPAIRKAIAGATTGYFEGFRKLADQMRKASDEGGKYAMD
                     GDRWVETTTPQLGTLLNVMYAAGEASEAYTESLLRSALSSLALEVGLVCLGLLTIAVA
                     TFVVVRRVTRPLAGMTGVVQRLADGDASVSIPGAARRDEIGAMARAVEVFKANAIERQ
                     RLEAEKADSEARAIAEKRRAAEALADEFQGKVGHLIQSLSTAAAQMESTSRAMSATAD
                     QTTGQAVNVATAAEQTSANVQTVAVATEELSSSIREIAEQVAKSSSIAGRAAAEAERS
                     DATVQALAAGAQKIGDVVALINTIAGQTNLLAL"
     gene            complement(1836..2885)
                     /locus_tag="VHN20_11085"
     CDS             complement(1836..2885)
                     /locus_tag="VHN20_11085"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HEX2726355.1"
                     /translation="MVVSSGAASIRSSEGRAFSSYEFLKLIEEKGQVGFWAWDFAAGT
                     QNWSIGICRIFGLEPGSVQPTMDTFMGLLHPDDRAGQAQQLDDVVRHGIMPDREYRII
                     RPGGGLRWVSCRGEVQFSREGRPQRAFGVLFDITTVQEASRAAQWSEQRFRTLAEATA
                     SIVWTATADGIVIDAPAWRSLTGQTIEEFRDSGWLDAVHPDDRGRTALAWHHAIANSA
                     TFHAQYRLRMVSGGYGWFNVRAAPVRGATGAVREWMGLLQPLQDGMSGRPADTKPLIT
                     GAQIRAARGLLRWSEEDLSKAARVSRSTVRRAEEVDDLPSARFENLQAIRAALEEAGV
                     ELTFPLAGQPGVQPK"
BASE COUNT          560 a         1129 c         1081 g          567 t
ORIGIN      
        1 gagcgccagg aggttggtct ggccggcgat ggtgttgatc agcgccacca cgtcgccgat
       61 cttctgcgcg ccggcagcga gcgcctggac cgtcgcgtcc gagcgctcgg cctcggcagc
      121 ggcacgcccg gcgatcgagg acgacttggc gacctgctcg gcgatctcgc gaatcgacga
      181 cgacagctct tccgtcgcga ccgcgacggt ctgcacgttg gcggaggtct gctcagcggc
      241 cgtggcgacg ttgaccgcct ggccggtcgt ctggtcggcg gtcgccgaca tcgcgcgcga
      301 cgtcgattcc atctgcgcgg cagcggtcga caggctctgg atcaggtggc ccaccttgcc
      361 ctggaactcg tcggccagag cctcggcggc gcggcgcttc tcggcaatgg cacgcgcctc
      421 cgaatcggcc ttctcggcct cgagccgctg acgttcgatg gcgttggcct tgaacacctc
      481 aacggccctc gccatggcgc cgatctcgtc gcgccgggcg gcgccgggaa tcgacacgct
      541 cgcgtcaccg tccgcaaggc gttggacgac gccggtcatt cccgccagcg gccgggtcac
      601 gcgccgcacc acgacgaagg ttgcaacggc aatcgtcagg aggcccaggc agacaagacc
      661 aacctccagg gcaaggctcg acagcgcgct ccggagcagg ctttcggtgt aggcctcgct
      721 cgcttcgccg gccgcataca tgacgttgag aagcgtgccg agctgcggag tcgtcgtctc
      781 gacccagcgg tctccgtcca tcgcgtattt gccgccttca tcgctggcct tgcgcatctg
      841 gtcggcgagc ttgcggaatc cctcgaaata gccggtcgtc gcgccggcga tggccttcct
      901 gatcgccggg ctggtcgccg cgtcggcggt cagattgtcg agctgttgcc agaggagatc
      961 gacgcgcgag cggacctcgg cgttggccgc catccggtcg gctggcatcg gagcccccga
     1021 cgagatcgcc gcggcaatgt tcgaacgctc gaagccggcg atgtcgcgca tgcgccagcc
     1081 gatctccttg acgaccgcca gccgggcgag aaccgggtca ctggcggcgg cctcgtgaag
     1141 cgccgcaaac cagaccttca gagatgcgtt cacagacgcg gtgatgatgg ggatgaaatt
     1201 cttgcgcagg gtctcgtcgc gctggtcgcg cggcaccttc agcgcctggt cggcctggcg
     1261 ccgggcctgg ttggccgcat cgagcgccgt cttcagatcc ttgagcagcg cctgcttgtt
     1321 ggcgaactcg aatttttcca gcaccgcgta gccggcatcg aaattctggg cgaccaccgc
     1381 ccgccgccgc tcgatctcgc gcagcgtctc ggccgacgcg ggattgggcg cctggaggcc
     1441 gttgttggtg gcgagacgct ccatcaacac ctcgaacagc ccggcgatga acttgttggc
     1501 gcccccgtcg aattcctgca tggcgcgcac ctcgccatac ttcgtccagg tcacggcggc
     1561 ctgatagccg acgagggcaa gcagcaggag cgacaggcat gcgatggggg cgagaagcgc
     1621 catgcgaatt gaatgcaggc gggactggga accagcagag tgggaagaac cggacatgca
     1681 ggcctcgcgc gggatcgtcg gagcgcggag agaatgccga atgatggttt ccggtttgcc
     1741 gatgcgaccg gtcccgcgag caggttttaa tcagcgtggc gagccaggaa tggtcacgag
     1801 aggcgtcagg cgaagcggcg gtgaagcaat ttgcgtcatt tcggctgcac cccgggctgg
     1861 cccgccagag gaaaggtcag ctcaacccct gcttcctcga gcgccgctcg aatcgcctgc
     1921 agattttcga aacgcgccga cggcaggtcg tcgacctctt cggcccggcg caccgtcgaa
     1981 cgcgagacgc gcgccgcctt cgacagatct tcttccgacc accgcagcag gccgcgggct
     2041 gccctgatct gcgcaccggt gatgaggggc ttcgtgtccg ccggccggcc cgacattccg
     2101 tcctgcagcg gctggagaag gcccatccac tcgcgcaccg cgccggtcgc gccgcggacg
     2161 ggggcagccc gcacgttgaa ccagccatag cccccggaca ccatccgtag ccggtactgg
     2221 gcgtgaaagg tcgcgctgtt agcgatggcg tggtgccagg ccagcgccgt cctgccgcga
     2281 tcgtccgggt gcacggcatc gagccacccg gaatccctga actcttcgat ggtttgaccc
     2341 gtcagcgatc gccaggccgg cgcatcgatg acgatgccgt cggccgtcgc cgtccagacg
     2401 atcgaggcgg tcgcctccgc gagcgtcctg aagcgctgct cgctccattg cgccgcgcgc
     2461 gaggcctcct gaaccgtcgt gatgtcgaac agaacgccaa acgcccgctg cgggcggcct
     2521 tcccgcgaaa actgcacctc cccgcggcag gatacccagc gcagcccgcc gccgggcctg
     2581 atgatgcggt attcgcgatc cggcatgatg ccgtgacgga cgacgtcgtc cagttgctgc
     2641 gcctgacccg ccctgtcgtc ggggtggagg aggcccatga aggtgtccat tgtgggttgg
     2701 acggagcccg gctcaaggcc gaagatgcgg catatgccga tcgaccagtt ctgcgtgccg
     2761 gcggcaaaat cccacgccca gaagccgacc tgccccttct cctcgatcag cttgaggaat
     2821 tcgtaagacg agaaggcgcg gccctccgac gaccttatag aggcggcccc actgcttacc
     2881 accatcgttc gcatcccccg cggatcccca gagcggaacc atgcatttcg attgaaggcc
     2941 tggacatgcg ccacaaacaa taccgtgagg cgagcctgct gttcacaggt tcgcacaatc
     3001 gaacgcggcg ccgaccgatc gcgtctcgtc gacaggtggc cgaaccatct tctttctgag
     3061 gcacttgacg gcacttctgc cgtggcaccg cgcatgcaat cttcgcggca cccaactctc
     3121 agtatttgca actaatcagc ctgagagcag cggctcacgt ccgttgcgaa ttccacaggc
     3181 aatcgccgcg cgcggcctgc ggagatcgcc gagctgcacg acccaggcgc ctaagttaac
     3241 ctgcgcttaa cgatgtctgt ctacttccat gctcttgcga atattgccag gaaatttgca
     3301 aaatgcgcat tcgaacgaaa atctttgccc tcgtggg
//
LOCUS       DATAIQ010000667         1649 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_404455, whole genome shotgun sequence.
ACCESSION   DATAIQ010000667 DATAIQ010000000
VERSION     DATAIQ010000667.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1649)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1649)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1649
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_404455"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..406
                     /locus_tag="VHN20_11090"
     CDS             <1..406
                     /locus_tag="VHN20_11090"
                     /inference="COORDINATES: protein motif:HMM:NF024212.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEX2726356.1"
                     /translation="KLLRRAHRSYSRRLQDELAAHGVSLAQYLHLRELWELNGITQNE
                     LSQKVGIEKASSTAVLDALEKNGLIVRVRNAQDRRKVNVHLTPAGQKIRDKLSPAARG
                     VALRAVSDLSEAELDSLFSALNRVIASLDPEG"
     gene            533..1573
                     /locus_tag="VHN20_11095"
     CDS             533..1573
                     /locus_tag="VHN20_11095"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEX2726357.1"
                     /translation="MLPSLNTRNLTRAVTAFAAALCMAAPVQAADFYAGKSIDLIIGG
                     DVAGGYDIYARSLARHMVRHIPGNPAIVPKNLPGAGSGRAAAQIASVAPKDGTVIGAI
                     FPGVIVAPLLEARAQALFDPTKLEYLGSADSGTRVCVTFQNSKIKTFEDAQQQKTILG
                     ASAAGGSTRDYASFLKKLAGMKAEIVSGYKGTADILLAMERGEVDGVCGQDWSSLKSQ
                     KPDWIRDNKLNVLVQMGLEPDADLANKGVPDLWKFVKDDETRKVIELIVAQQIFGRPY
                     IAPPGTAPEQLKILRTAFMATMQDKQFLEEAEKQRIDITPSSGERVQKVVQDLYASPK
                     HIVDRAKDAVQP"
BASE COUNT          322 a          552 c          535 g          240 t
ORIGIN      
        1 caagctcctg cgccgtgccc atcgctccta cagccgcagg ctgcaggatg agttggcggc
       61 gcacggcgtc agccttgccc aatacctgca cctgcgtgag ctctgggagc tcaacggcat
      121 cacgcagaac gaactctcgc agaaggtcgg catcgaaaag gcgtcctcga cggccgtgct
      181 cgacgccctc gagaaaaacg gcctgatcgt gcgcgtccga aatgcccagg accggcgcaa
      241 ggtgaacgtt cacctgacgc ctgcgggaca gaagatccgc gacaagctca gcccggcggc
      301 caggggcgtc gcgctccggg cggtgagcga cctgtccgag gcggaactgg acagcctgtt
      361 ctcggccctg aacagggtga tcgccagcct cgatccggag ggctgaacgc aggctcagcc
      421 gtggggcgac gcaaagcgca agtctgcgga gttgccgagc aaacgcgtcc tgccttagct
      481 tgcggccacc aaaagcgcgc cctcgcgcca gtcaggacaa cgacggagga cgatgttgcc
      541 aagcctgaac acccgaaacc tcacaagggc cgtgacggcc ttcgcggccg ccctgtgcat
      601 ggctgcgccg gttcaggcgg ccgatttcta cgccggcaag tcgatcgacc tgatcatcgg
      661 cggcgacgtt gccggcggct acgatatcta tgcccgcagc ctcgcccgtc acatggtccg
      721 gcacatcccc ggcaacccgg cgatcgtccc caagaacctg ccgggcgccg gcagtggccg
      781 cgccgcggcc cagatcgcct cggtcgcgcc gaaggatggg acggtgatcg gagcgatctt
      841 cccgggcgtg atcgttgccc ccttgctcga agcgcgcgcg caggcgctgt tcgacccgac
      901 gaagctcgag tatctcggca gcgccgacag cggcacccgg gtctgcgtca ccttccagaa
      961 ctcgaagatc aagacctttg aagacgcgca gcagcagaag acgatcctcg gcgccagcgc
     1021 ggcgggcggc tcgacgcgcg attacgcgtc cttcctcaag aagctggccg gaatgaaggc
     1081 cgagatcgtg tcgggctaca aaggcacggc cgacatcctg ctcgccatgg aacgcggcga
     1141 ggtcgatggc gtctgcggcc aggactggtc gagtctcaag tcgcaaaagc cggactggat
     1201 tcgtgacaac aagctcaacg tgctcgtgca gatgggcctc gaacccgacg ccgacctggc
     1261 aaacaagggc gtcccggacc tgtggaagtt cgtcaaggac gacgagaccc gcaaggtgat
     1321 cgagctgatc gtggcgcaac agattttcgg acgcccctac atcgcgccgc cgggcacggc
     1381 gcctgagcag ctcaagatcc tgcgcaccgc cttcatggcg acgatgcagg acaagcagtt
     1441 cctggaagag gccgagaagc agcgcattga tatcaccccg tcctcgggcg aaagggtgca
     1501 gaaggtggtg caggaccttt acgcctcgcc caagcacatc gtcgaccggg cgaaggacgc
     1561 ggtccagccg taagcgcctc atgtgctcgc gggtcggagt gctccccgac tcgcgcgccc
     1621 acgctgggcc gacgacttaa cgggcgatc
//
LOCUS       DATAIQ010000668         1945 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_200558, whole genome shotgun sequence.
ACCESSION   DATAIQ010000668 DATAIQ010000000
VERSION     DATAIQ010000668.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1945)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1945)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1945
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_200558"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..917)
                     /locus_tag="VHN20_11100"
     CDS             complement(<1..917)
                     /locus_tag="VHN20_11100"
                     /EC_number="7.4.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008139305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide ABC transporter ATP-binding protein"
                     /protein_id="HEX2726358.1"
                     /translation="MTARVLDVENLAMHFVLRRSALGKALATIKAVDGVSFTLREGET
                     LALVGESGCGKSTVGRLIMRLISPTGGRILVDGTDIATIPERDVRAFRRRVQLIFQDP
                     YASLNPRMTVGEILAEPLMLHAIVPRAKRRDRVAELLALVGLQPYHAARYPHEFSGGQ
                     RQRIVIARALAVEPKVIICDEPVSALDVSIRAQILNLLKEIQGRLGLGYIFISHDLGV
                     VKHISDRIAVMYLGRIVEIGAADEVFANPRHPYTRALLSAIPVVSPEARRERRILQGD
                     VPSPINPPPGCHLHTRCPFAADICRVDPPP"
     gene            complement(929..1915)
                     /locus_tag="VHN20_11105"
     CDS             complement(929..1915)
                     /locus_tag="VHN20_11105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007607870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2726359.1"
                     /translation="MTAPPLLEVRDLHVVFSGTDGRRTFAVDGVSFAVERGRTLGIVG
                     ESGCGKSVTSLAVMGLLPKGSADVSGQVRFDGLDLLQQPGRVMRDLRGNRLAMIFQEP
                     MTSLNPSYTVGDQIMEAIVRHRDVSRKEAAARAVEMLRRVRIPNPEARFHDYPHRLSG
                     GMRQRVMIAMALACDPELLIADEPTTALDVTIQAQILDLMRRLREESGAAIILITHDL
                     GVVAEVCDEVVVMYAGQVVERAPVRELFRFPQHPYTVGLLGALPRLDRRRPRLAAIEG
                     TVPNMMKPPQGCRFAARCPFAIAKCAEMPPLEPVEPGHLTRCWRAPLQRLAA"
BASE COUNT          331 a          644 c          692 g          278 t
ORIGIN      
        1 ggcggcgggt cgacgcggca gatgtcggcg gcgaatgggc agcgcgtgtg caggtgacag
       61 ccgggaggcg ggttgatcgg gctcggcacg tcgccctgca agatccgccg ctcgcgccgc
      121 gcctccggcg agacgacggg aatggcggac aggagcgcgc gcgtatacgg gtggcggggg
      181 ttggcgaaca cctcgtcggc ggcgccgatc tcgacgatgc gcccgagata catcaccgcg
      241 atgcggtccg agatgtgctt cacgacgccg agatcgtgcg agatgaaaat gtagcccagc
      301 ccgagccgcc cctggatttc cttgagcagg ttgaggatct gcgcgcggat cgagacgtcg
      361 agcgcggaga ccggctcgtc gcagatgatg accttgggct cgaccgcgag cgcccgtgcg
      421 atcacgatgc gctggcgctg gccgcccgag aattcgtgcg ggtaacgcgc ggcgtgatag
      481 ggctggagcc cgaccagggc gaggagttcg gcgacgcgat cgcggcgttt cgcccgcggc
      541 acgatcgcgt gcagcatcaa aggctcggcg aggatctctc ccaccgtcat gcgcgggttg
      601 agcgacgcat acggatcctg aaagatcagc tggacgcggc gccggaaggc gcgcacgtcg
      661 cgctcgggaa tggtggcgat gtcggtgccg tcgaccagga tgcgcccgcc cgtgggcgag
      721 atcaggcgca tgatgaggcg gccgacggtc gacttgccac acccggattc gccgaccagc
      781 gccagcgtct cgccttcgcg caaggtgaac gagacgccat ccaccgcctt gatcgtcgcg
      841 agcgccttgc ccagcgccga gcgcctgagc acgaaatgca tcgccaggtt ctcgacgtcg
      901 agcacgcgcg cggtcatggc gccgccgctc acgccgcgag ccgttgcaac ggcgcccgcc
      961 agcagcgggt cagatgaccc ggctcgacgg gctcgagcgg cggcatctcg gcgcatttgg
     1021 cgatcgcgaa cggacagcgt gccgcgaagc ggcagccctg gggcggcttc atcatattgg
     1081 gcactgtgcc ctcgatggcg gcgagacgcg gccggcgccg gtcgaggcgc ggcagagccc
     1141 cgagcagccc gaccgtgtag ggatgctgcg gaaagcgaaa caactcgcgc accggcgcgc
     1201 gctcgacgac ttggccggca tacatgacca cgacctcgtc gcagacctcc gcaacgacgc
     1261 cgagatcgtg cgtgatcagg atgatcgcag cgccgctctc ctcgcgcagc ctgcgcatca
     1321 ggtcgaggat ctgcgcctgg atggtgacgt cgagcgccgt cgtcggctcg tcggcaatca
     1381 gaagctcagg atcgcaggcg agcgccatgg cgatcatgac gcgctgacgc atgccgccgg
     1441 acagccggtg cgggtaatcg tgaaaccgtg cctccggatt cggaatgcgc acgcggcgca
     1501 gcatctcgac ggcgcgcgcc gccgcctcct tccgggacac gtcgcggtgg cgcacgattg
     1561 cttccatgat ctggtcgccc accgtgtacg acgggttgag cgaggtcatc ggctcctgga
     1621 agatcatggc gagccggttg ccgcgcagat cgcgcatcac gcggccgggc tgttgcaaaa
     1681 ggtccaaccc gtcgaagcgg acttgtccgg aaacgtcggc gctgcccttc ggcagaaggc
     1741 ccatcacggc aagcgacgtc acgctcttgc cgcagcccga ttccccgacg atgccgaggg
     1801 tccgaccgcg ctcgaccgca aaactcacgc catcgaccgc gaaggtgcgc cggccgtcgg
     1861 ttccggaaaa cacgacgtgc aggtcgcgga cctcgaggag cggcggggct gtcatcgcaa
     1921 atcgctctcc agggcgacgg cctta
//
LOCUS       DATAIQ010000669         4098 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_200577, whole genome shotgun sequence.
ACCESSION   DATAIQ010000669 DATAIQ010000000
VERSION     DATAIQ010000669.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4098)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4098)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4098
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_200577"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..324
                     /locus_tag="VHN20_11110"
     CDS             <1..324
                     /locus_tag="VHN20_11110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6163 family protein"
                     /protein_id="HEX2726360.1"
                     /translation="ALMWIAKGLGYWAVILGVDSAPTPFEARTTGFQATTIYFAVIDL
                     VAAVGLWLTSTWGGVLWLLAVMSHLILTVFFPNIVTGGPVLIGLFISFIATYLYISWL
                     AASDQ"
     gene            504..992
                     /locus_tag="VHN20_11115"
     CDS             504..992
                     /locus_tag="VHN20_11115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012336450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix DNA-binding protein"
                     /protein_id="HEX2726361.1"
                     /translation="MAEPARAEDVAVKPQYLEALHLVERLHRRLLDVIKDEFERRGRD
                     DVNSVQALLLYNIGDKELTASELRTRGYYLGSNVSYNVKKLVEMGYLHHARSRTDRRS
                     VRISLTDKGQQVHMMVKALYDKHARTIEPIGGISNDDFQRLNQALIRLERFWTDQIRY
                     RL"
     gene            1790..3058
                     /locus_tag="VHN20_11120"
     CDS             1790..3058
                     /locus_tag="VHN20_11120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HEX2726362.1"
                     /translation="MQRRAFLFTGSIALAAHAVPAWAQNLAEIGAQHEWRQNYDSASR
                     VRVTRSSTPILSPQAVAATEEAIDRYRDIVARGGWAPLQIGDRLRVGVRSPGVAALRQ
                     RLVLTGDLDPAAGASPIYDSYVEAGVRRFQARHGINMTGAVNSVTLAALNVPANIRLR
                     QLELNLVRLRAYSGNLGHRYVIVNIPAAVVETVEEGRVATRHAAGVGKIDRQSPVMNA
                     KITEVNFNPFWTVPASIIRKDLIPKMQKEPSYLSDNRIRIYSQRGEEIAPQRVNWHSD
                     EATRYMFRQDPGGDVNSMGFVRINIPNPHGVYMHDTPSKGIFGDDFRFVSSGCVRVQN
                     VRDYITWLLKDTSGWDREQIDATFKAGQRIDARLVQPVNVYWTYITAWSTAEGLIQFR
                     DDIYNRDGLGIAPVVARAPANEPDDDFLNN"
     gene            3264..>4098
                     /gene="glyA"
                     /locus_tag="VHN20_11125"
     CDS             3264..>4098
                     /gene="glyA"
                     /locus_tag="VHN20_11125"
                     /EC_number="2.1.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004372 - glycine hydroxymethyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_function: GO:0070905 - serine binding [Evidence IEA];
                     GO_process: GO:0019264 - glycine biosynthetic process from
                     serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HEX2726363.1"
                     /translation="MSASEAVKAHLSNSFFSAGLADADPEIARAVALELGRQRDEIEL
                     IASENIVSRAVLEAQGSVMTNKYAEGYPGRRYYGGCQFVDIAEELAIERACRLFECKF
                     ANVQANSGSQANQAVFMALMQPGDTFMGLNLAAGGHLTHGSPVNMSGKWFNVVSYGVR
                     ADDHRVDMDEVAQLAQQHRPKVIVAGGSAYARFWDFARFREIADAVGAMFMVDMAHFA
                     GLVAGGSHPSPFPHAHVVTTTTHKTLRGPRGGMVLSRAEYAKDLDRSLFPGVQGGPLM
                     HI"
BASE COUNT          741 a         1385 c         1260 g          712 t
ORIGIN      
        1 gccctcatgt ggatcgccaa ggggctcggc tactgggcgg tgatcctcgg ggtcgacagc
       61 gccccgaccc cgttcgaggc ccgcaccacc ggcttccagg ccaccaccat ctatttcgcc
      121 gtgatcgacc tggtggcggc cgtcggcctg tggctgacca gcacctgggg cggcgtgttg
      181 tggctcctgg cagtaatgag ccacctgatc cttacagtct tcttcccgaa tatcgtgacg
      241 ggtgggccag tattgatcgg ccttttcatt tcgttcatcg caacctacct ctacatatcg
      301 tggcttgccg caagcgatca gtgagagcta agccattgat aaaaaacgac tttcaatatt
      361 tgtttacaat gagaagtaaa tccggaattc atcgtattat ttaaactcgt tttcatacgc
      421 gtaacctaga ttaggcctca caacgcgacc ggaatacccg gcgaggaaac agtgaggcga
      481 ttatgaacac cgttgcgaaa atcatggcgg agccggctcg tgctgaagac gtagccgtta
      541 agccgcagta tcttgaggct ttgcatctcg tggagcggct gcaccgtcgt ctgctcgacg
      601 tgatcaagga cgaattcgag cgtcggggcc gcgatgacgt caacagcgtc caggctctgc
      661 ttctctacaa catcggcgac aaggagctga ccgccagcga gctgcgcacc cgcggctact
      721 atctcggttc gaacgtatcg tacaacgtca agaagctggt cgagatgggc tacctgcacc
      781 atgcccgctc gcgcaccgac cgccgctcgg tccgcatcag cctgaccgac aagggccagc
      841 aggtgcacat gatggtcaag gcgctctacg acaagcatgc ccgcacgatc gagccgatcg
      901 gcggcatcag caacgacgac ttccagcgcc tcaaccaggc cctgatccgc ctggagcgct
      961 tctggaccga ccagatccgc taccggctgt aagaccagac ccctctccgg acaggggagg
     1021 ggctccaaat ctctgtcatt ccggggcggc cgaaagccga gcccggaacc cacggccggg
     1081 tgcaccctta aggttcagcg tggcggccgt tcgcgggttc cgggttcctc gctgaaggtc
     1141 ggccccggaa tgacagacga tgttgcgcaa acctccatcc cgcccggggc gttccagagg
     1201 cgacgcgtca gcagattttc agcaaaatag tggagccgcg cctttgctca tgcccggcga
     1261 gacatcagca aatttcagca aaatagtgga gccgcccctt tgctcaggcc cggcggggcg
     1321 tcagcagatt tcagcaagag actggagccg cccctttgct caggcccggc gaggcgtcag
     1381 cagatttcag caaaatactg gagccgcccc tctgcccatg cccggccagg ttagtaaatt
     1441 tcagcaaaat agtggacccg cgctgtctgc cggcgggaca ggcgcgagcg ttgccgtaac
     1501 cccactcccg gacaaacccg tctcgcttgg ggctttccag tgcggatgcg tcagcagatt
     1561 ttcagcaaaa tagtggagcc gggccatctg cccttcgcgg ccgggtgcgc gtgttgccgt
     1621 cctgcatctg tcgcggacca atcagactgc ggggccggga agggcgcgcg atctgcctta
     1681 aaatggccgt ggaagtcgtg gtttttcgct gcaacgacga aagggggcct tccgtgctcc
     1741 ccgactctgc gcttcaattg acctcccgat cgagacccaa gctttgacga tgcagcgccg
     1801 cgcctttctt ttcaccggat cgatcgctct tgctgcccac gccgtgccgg cctgggcgca
     1861 gaatctcgcc gagatcgggg cccagcacga atggcgccag aactatgatt cggcctcgcg
     1921 ggtgcgggtg acgcgctcct cgacgccgat tctgtcgccg caagccgtgg ccgcgaccga
     1981 ggaagccatc gaccgttacc gcgacatcgt cgcccgtggc ggctgggcgc cgctgcagat
     2041 cggcgaccgc ctgcgcgtcg gcgtgcgcag ccccggcgtc gcggctttgc gccagcgcct
     2101 ggtcctgacc ggcgacctcg acccggccgc gggcgcctcg ccgatctatg attcctatgt
     2161 cgaggccggg gtgcgccgct tccaggcccg ccacggcatc aacatgaccg gcgccgtcaa
     2221 cagcgtcacg ctggccgccc tcaacgtgcc ggccaacatc cgcctgcgcc agctcgagct
     2281 caacctcgtg cgcctgcgcg cctattccgg aaatctcggc catcgctacg tgatcgtgaa
     2341 catccccgcc gcggtcgtcg agaccgtcga ggaggggcgt gtggcgacgc gtcacgccgc
     2401 cggcgtcggc aagatcgacc gccagtcgcc ggtcatgaac gccaagatca ccgaggtgaa
     2461 tttcaatccg ttctggacgg ttccggcctc gatcatccgc aaggatctga tcccgaagat
     2521 gcagaaggag ccgagctacc tcagcgacaa ccgcatccgc atctacagcc agcgcggcga
     2581 ggagatcgcc ccgcaacggg tgaactggca ctcggacgag gcgacccgct acatgttccg
     2641 gcaggatccg ggcggcgacg tcaactcgat gggcttcgtg cgcatcaaca tccccaaccc
     2701 gcacggcgtc tacatgcacg atacgccctc caagggcatc ttcggcgacg acttccgctt
     2761 cgtctcgtcg ggctgcgtgc gcgtgcagaa cgtgcgcgac tacatcacct ggctgttgaa
     2821 ggacacgtcc ggctgggacc gtgagcagat cgacgccacc ttcaaggccg gccagcgcat
     2881 cgacgccagg ctcgtccagc cggtcaacgt ctactggacc tacatcaccg cctggtcgac
     2941 ggccgaaggc ctgatccagt tccgcgacga catctacaac cgcgacggcc tcggcatcgc
     3001 cccggtcgtg gcgcgggcgc cggccaacga gcccgacgac gacttcctca acaactagcc
     3061 gagccatgct cgcctccgac ggcccgccct ggcgggccgt ttgcgtttgt ggttgacggc
     3121 ctgcagcctc atgcccgcga cggaggcccc ctggcttggc gcgcttccgg agcgcatgct
     3181 aaaggcctcg cccgaggcga cagccgccag ccgcgccgcg gcggcgcgaa gcccctaaga
     3241 cctgcggcag cagcgaggat ccaatgagcg cgagtgaagc ggtcaaagcg catttgtcga
     3301 acagcttttt ctcggcgggc ctcgccgatg cggatcccga gatcgcccgc gccgtggccc
     3361 tcgagctcgg ccgccagcgc gacgaaatcg agctgatcgc ctccgagaac atcgtgtcgc
     3421 gggccgtgct cgaggcgcag ggctcggtga tgacgaacaa atacgcggaa gggtatccgg
     3481 gccggcgcta ttacggcggc tgccagttcg tcgacatcgc cgaggagctc gccatcgagc
     3541 gcgcctgccg gctgttcgag tgcaaattcg ccaacgtcca ggccaattcc ggcagccagg
     3601 cgaatcaggc cgtgttcatg gcgctgatgc agccgggaga taccttcatg gggctcaatc
     3661 tcgcggccgg cggccacctg acgcacggat cgcccgtcaa catgtcgggc aagtggttca
     3721 acgtcgtgag ctacggcgtc cgcgcggacg accaccgcgt cgacatggac gaggtcgcgc
     3781 agctcgcgca gcagcatcgc ccgaaggtga tcgtggccgg cggctcggct tacgcgcgct
     3841 tctgggactt cgccaggttc cgcgagatcg ccgacgccgt cggcgccatg ttcatggtcg
     3901 acatggcgca tttcgccggc ctcgtcgccg gcggctcgca tccctcgccg tttccgcacg
     3961 cgcatgtcgt cacgacgacc acgcacaaga cgctgcgcgg gccgcggggg ggaatggttc
     4021 tgagccgcgc cgagtacgcc aaggacctcg accgctcgtt gttccccggc gttcagggcg
     4081 gaccgctcat gcacatca
//
LOCUS       DATAIQ010000670         1561 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_450205, whole genome shotgun sequence.
ACCESSION   DATAIQ010000670 DATAIQ010000000
VERSION     DATAIQ010000670.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1561)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1561)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1561
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_450205"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1441)
                     /locus_tag="VHN20_11130"
     CDS             complement(<1..1441)
                     /locus_tag="VHN20_11130"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HEX2726364.1"
                     /translation="MRKTRLLVVDDIADNRTILSRRFERRGFEVVEADGGRCALDLIS
                     RQPFDLVLLDILMPDLDGLEVLKLIRADYTPSALPVVMVTARAENSDVVQALELGAND
                     YLTKPVDFAIALARVQTQIARKHAEDELRRAHSQLRAHVRQLEEAIAERDRSEARVEH
                     MSRHDDLTGLGNRVVLHEHLARAMKPESDVQGFALLCVDVNQFKAVNDTCGHEAGDQL
                     LRLVAERVQGCVSHRDTVVRLGADEFAIIAADAGTPDAAGALAHRILSAIAEPCDIGG
                     LQLVVTCSIGVSLAPADSTDPDTLFRNAEMALASAKSEGRNRVQFFEPMMNVRAQARR
                     FLELDLRKALGAGDLELVYQPLYNLKLATITGFEALLRWNHPEKGLISPSEFIPIAEE
                     SEQILGLGDWVLRQACEEASHWPEDIKVAVNVSAVQFRRGALAQTVLSALASARLAPG
                     RLELELTETALLSNREQASAVLDQLRSLGV"
BASE COUNT          267 a          514 c          504 g          276 t
ORIGIN      
        1 gtacgccgag ggaacgcagc tggtcgagca ccgccgaggc ttgctcgcgg ttgctcagaa
       61 gcgccgtttc cgtaagttcc agttccagac ggccgggggc gagtctggcc gacgccaggg
      121 cggagaggac cgtctgcgcc agcgcgccgc gacggaactg aacggccgag acattcaccg
      181 cgaccttgat gtcctcgggc caatgcgacg cttcctcgca cgcctgcctc agcacccaat
      241 cgccaaggcc caggatctgc tcgctttcct cggcgatcgg aatgaactcg ctcggcgaga
      301 tcaagccttt ctcgggatgg ttccagcgca ggagggcttc gaaccccgtg atggttgcaa
      361 gcttcagatt gtagagcggt tgatagacga gctccaagtc gcctgcccca agcgccttgc
      421 gcagatccag ctcgagaaac cgccgcgcct gggcgcggac gttcatcatg ggttcgaaga
      481 actgaacgcg attgcggcct tcgctttttg cgctggccag cgccatctcg gcgttcctga
      541 acagggtatc ggggtcggtg ctgtccgcgg gcgcaagcga cacgccgatg ctgcaggtca
      601 cgacgagctg caggccgccg atgtcgcaag gctctgcaat cgccgacagg attcgatgcg
      661 ccaatgctcc ggcggcatcc ggggtgcctg catcggccgc gatgatggca aattcatcgg
      721 ctcccagccg cacgaccgtg tcgcggtgcg atacgcagcc ctgcacccgc tctgccacca
      781 gccgcagcag ctgatcgccg gcctcgtggc cgcacgtgtc gttgaccgcc ttgaactggt
      841 tcacgtccac gcacagcaag gcgaacccct ggacgtcgga ctcgggcttc atcgcgcgcg
      901 cgagatgctc gtgcagcaca acgcggttgc cgagccccgt caggtcgtcg tgtcgcgaca
      961 tgtgctcgac gcgcgcttcg gacctgtcgc gctcggcgat ggcttcctcg agctgtcgaa
     1021 cgtgcgcgcg aagctgggaa tgggcccggc gcaactcgtc ctcggcgtgc tttcgtgcga
     1081 tctgcgtctg caccctggcg agcgcgatcg caaagtccac cggcttggtg agatagtcgt
     1141 tggcgccgag ctccagcgcc tgcacgacgt cgctgttctc cgcccttgcg gtgaccatga
     1201 ccaccggcaa ggcggacggt gtgtaatcgg cgcggatgag cttgagcacc tccaacccgt
     1261 cgaggtcggg catcaggata tcgagcagaa cgaggtcgaa gggctgacgg ctgatgagat
     1321 cgagggcgca gcgaccgcca tccgcctcga caacctcgaa gccgcggcgc tcgaatcgcc
     1381 tgctgaggat cgtccggttg tcggcgatgt catcgacgac gaggagccgc gtcttgcgca
     1441 tcagattgca cgcccggtta atcgtatctt tacgctgact tgcccgtgcc cgcgaaggcg
     1501 caaggcgcgc ctccgcacgg cacgagctta cacgggcaag actggctaaa gtcttaccct
     1561 g
//
LOCUS       DATAIQ010000671         1667 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_127899, whole genome shotgun sequence.
ACCESSION   DATAIQ010000671 DATAIQ010000000
VERSION     DATAIQ010000671.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1667)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1667)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1667
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_127899"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..351)
                     /locus_tag="VHN20_11135"
     CDS             complement(<1..351)
                     /locus_tag="VHN20_11135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012384902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX2726365.1"
                     /translation="MTPAARAAAAIEVLGDIEGRRRPAADALKDWGLAHRFAGSKDRA
                     AIASLVYDALRRKASAAWLMDDATPRGIVLGMLRLQRGLGVDDIAGLFSGERHAPPPL
                     SDAERARLTSGTLDG"
     gene            complement(451..882)
                     /locus_tag="VHN20_11140"
     CDS             complement(451..882)
                     /locus_tag="VHN20_11140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MAPEG family protein"
                     /protein_id="HEX2726366.1"
                     /translation="MSFGIEAVLFPVFVQVGLTFVLLFWMASLRVGALQRREVTLADV
                     ALSRSAWPKRPRQVANAYHNQFELPLLFYVLVILAMFTRKADTFFVVMEWMFVAARLA
                     HAAIHVSSNDVRLRFYAFAVSAAILLIMWIVFALRLLYAGL"
     gene            complement(890..>1667)
                     /locus_tag="VHN20_11145"
     CDS             complement(890..>1667)
                     /locus_tag="VHN20_11145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012043708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HEX2726367.1"
                     /translation="DRAERLIDAGCDLIVVDTAHGHSAKVLETVTRVKKLSNAVQVIA
                     GNVATREGAKALIDAGADAIKVGIGPGSICTTRIVAGVGVPQLTAIMEAVEASRDAGV
                     PVIADGGIKFSGDLAKALAAGASCAMVGSLLAGTDEAPGEVFLYQGRSYKSYRGMGSV
                     GAMARGSADRYFQAEVQDALKLVPEGIEGQVPYKGPVAAVLHQLAGGLRAAMGYVGAA
                     DLGEFRDKARFIRITNAGLRESHVHDVTITRESPNYPTRS"
BASE COUNT          273 a          583 c          582 g          229 t
ORIGIN      
        1 gccgtcgagc gtgccgctcg tcaggcgcgc gcgctcggca tccgacagcg gcggcggcgc
       61 gtggcgctcg cccgagaaca ggccggcgat gtcgtcgacg ccgaggcccc gctgcagccg
      121 cagcatgccg agcacgattc cacgcggcgt cgcgtcgtcc atcagccacg cggcggacgc
      181 cttgcggcgc agggcgtcgt agacgaggct ggcgatggcg gcgcggtcct tcgagccggc
      241 gaagcgatgc gccagtcccc agtccttgag cgcatcggcc gccggccggc gccggccctc
      301 gatgtcgccc agaacctcga tcgcggcggc ggcgcgcgcg gcgggcgtca tggccgagca
      361 tcgtccggca aagtgggaac cgctttgccg gcaaagatga tgcgatacaa agaactttta
      421 gagcgaggtc gagtcatgtc gacctagctg ctaaaggcct gcgtagagca ggcgcagggc
      481 gaacacgatc cacatgatga gaaggatcgc cgcgctcacc gcgaaggcgt agaagcgcag
      541 gcgcacgtcg ttgctggaca cgtggatcgc cgcatgcgcg agccgcgccg ccacgaacat
      601 ccattccatg accacgaaga aggtgtcggc cttgcgcgtg aacatcgcca ggatgacgag
      661 cacgtagaac agcagcggca gctcgaactg attgtgatag gcgttcgcca cctgccgcgg
      721 acgcttcggc cacgccgacc ggctcagcgc gacgtcggcc agcgtcacct cgcggcgctg
      781 cagcgcgccg acgcgcaggc tcgccatcca gaacagcagg acgaaggtca ggccgacctg
      841 gacgaagacc gggaacagga ccgcttcgat gccaaagctc atcacatcct cacgaccggg
      901 tcgggtagtt cgggctttcg cgcgtgatgg tcacgtcgtg cacgtggctt tcgcgcaggc
      961 ccgcattggt gatgcggatg aaacgcgcct tgtcgcggaa ctcgccgaga tcggcggcgc
     1021 cgacatagcc catggcggcg cgcaggccgc cggcgagctg gtgcagcacc gccgcgaccg
     1081 ggcccttgta cggcacctgc ccctcgatgc cctcgggcac gagtttcagc gcgtcctgca
     1141 cctcggcctg gaagtagcgg tcggcggagc cgcgcgccat ggcgccgacc gagcccatgc
     1201 cgcgatacga cttgtacgag cggccctggt agaggaacac ctcgccgggc gcctcgtcgg
     1261 tgccggcgag cagcgagccg accatcgcgc aggacgcgcc cgccgccagc gccttggcga
     1321 ggtcgcccga gaacttgatg ccgccgtcgg cgatcaccgg cacgcccgcg tcgcgcgacg
     1381 cctcgaccgc ctccatgatc gccgtcagct gcggcacgcc gacgccggcg acgatgcgcg
     1441 tcgtgcagat cgagcccggg ccgatgccga ccttgatggc gtcggcgccg gcgtcgatca
     1501 gcgccttggc gccctcgcgc gtcgccacgt tgccggcgat cacctgcacg gcgttcgaca
     1561 gcttcttcac gcgggtgacg gtctcgagga ccttggccga gtggccatgg gcggtgtcga
     1621 caacgatgag atcgcacccg gcatcgatga ggcgctcggc ccggtcg
//
LOCUS       DATAIQ010000672         2421 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_404607, whole genome shotgun sequence.
ACCESSION   DATAIQ010000672 DATAIQ010000000
VERSION     DATAIQ010000672.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2421)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2421)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2421
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_404607"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..104)
                     /locus_tag="VHN20_11150"
     CDS             complement(<1..104)
                     /locus_tag="VHN20_11150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015822930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MscL family protein"
                     /protein_id="HEX2726368.1"
                     /translation="MLEEFKKFALRGNVVDLAIGVVIGVAFGAIVTSLV"
     gene            211..639
                     /locus_tag="VHN20_11155"
     CDS             211..639
                     /locus_tag="VHN20_11155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008125390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TspO/MBR family protein"
                     /protein_id="HEX2726369.1"
                     /translation="MFLVLVVGGGLGIGYMTLPGEWYAGLAKPKFNPPGWLFGPVWTV
                     LYVLIAIAGWRVWQNDLGGSPMRLWWVQLVLNFLWSPTVFAAHRVGLAFLVVLLLLAA
                     ILSFVVMSWRQDRVTAWLFAPSAAWVLFASVLNGAIWVLN"
     gene            complement(790..2109)
                     /locus_tag="VHN20_11160"
     CDS             complement(790..2109)
                     /locus_tag="VHN20_11160"
                     /inference="COORDINATES: protein motif:HMM:NF012415.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CAP domain-containing protein"
                     /protein_id="HEX2726370.1"
                     /translation="MALTPQEQLVLEMINRARLNPAAEAARLRLSSLNEGVPLGERMT
                     AAAKQPLAPDDSLALSADRHSLHMLAVDLFGHQGIGDGTPQSRMIGAGYVFTPPSALG
                     ENIGFVGSTGALNPTTSAIQTYENLFIDRNVLGRGHRTNILAEEFEEAGVGIALGQFT
                     QNGTTFNAAMQTHNFAASGNQVFITGVAIRDLDHDNFYDIGEGRGGVLATVRSGATVV
                     GSDTTEAAGGYGVSTAGGTLSVTFSGGGLPAPVTAIVAAGAKNAKVDLVDNSEILSSA
                     NTTLGAGAHDLGLLGIAALTGVGNNLANVITGNAGANVLNGMAGNDVLAGGLGRDTLI
                     GNLGADKFDFNSVAESRPGATRHDVVAFVRAQGDKIDLSTIDADTDGTAGNQAFTFIG
                     TRAFTGVDGQLRFAGGLLQGDTDGNRVADIEVQVTGVTSMIRADFIL"
BASE COUNT          372 a          772 c          826 g          451 t
ORIGIN      
        1 acaagcgagg tgacaatggc accgaaagcg acgccgatga cgacgcctat tgcgagatcg
       61 acgacattcc cccggagagc gaatttcttg aattcctcga gcatgaccgg ttcctcccgt
      121 tctcaagccg acaagcaatg atcgcatggc aacaaatgtg ccgtccaatg ccgctgcaaa
      181 caggggcctg aacccgttct tttccctgct gtgttcctcg tcctcgtcgt cggcggcggg
      241 ctcggcatcg gctacatgac cctgccgggc gaatggtacg cgggtctcgc gaagccgaaa
      301 ttcaatccgc cagggtggct gttcgggccg gtctggacgg tgctctatgt gctgatcgcc
      361 atcgccggct ggcgcgtatg gcaaaacgac ctgggcggct cgccgatgcg gctgtggtgg
      421 gtgcagctcg tgctcaattt cctttggtcg ccgaccgtct ttgccgccca tcgggtcggg
      481 ctcgcgtttc ttgtcgtcct gctcctgctc gccgcaattc tgtccttcgt ggtcatgtca
      541 tggcgccagg atcgggtgac ggcgtggctg ttcgcgccct ccgcggcctg ggtgttgttc
      601 gcttccgtgc tgaatggcgc gatttgggta ttgaactagc tgggaaacgg gtgcgcggcg
      661 gttcgctaca gagctgctcc aatcccgacg aagcagctgc tgacgattgc cgtgacgccc
      721 ggtgcggagc gccacagccc cagcggccct gccgtcgcct gtgcctcatg cagacacgcg
      781 tgcgccaggt cagaggatga agtctgcccg gatcatcgac gtaacgccgg tgacctgcac
      841 ctcgatgtcg gcgacgcggt tgccgtccgt gtcgccctgg agcaagccgc cagcgaagcg
      901 caattgcccg tcgacgccgg tgaaggcgcg cgtgccgatg aaggtgaagg cctggttgcc
      961 ggccgtgccg tcggtgtcgg cgtcgatggt cgagaggtcg atcttgtcgc cctgcgcccg
     1021 gacgaaggcg acgacgtcgt gacgggtggc gccgggccgc gactcggcga ccgagttgaa
     1081 gtcgaacttg tcggcgccga gattgccgat caacgtgtcc ctgccgaggc cgccggcgag
     1141 cacgtcgttg ccggccatgc cgttgagcac gttggcgccg gcattgccgg tgatgacgtt
     1201 ggcgaggttg ttgccgacgc cggtcagcgc ggcaatgccg agcaggccga gatcgtgcgc
     1261 gccggcgccg agcgtggtgt tcgccgacga caggatctcg ctgttgtcga caagatcgac
     1321 cttggcgttc ttcgctccgg ccgcgacgat cgcggtgacg ggggccggca gcccgccgcc
     1381 cgagaacgtc accgacaagg tcccgccggc cgtgctgacg ccgtagccgc cggcagcctc
     1441 ggtggtatcg ctcccgacca ccgtggcgcc ggacctgacg gtcgccagca cgccgccgcg
     1501 gccttcgccg atgtcgtaaa aattgtcgtg gtcgaggtcg cggatggcga cgccggtgat
     1561 gaagacctgg ttgcccgagg cggcgaagtt gtgggtctgc atcgcggcgt tgaaagtcgt
     1621 gccgttctgc gtgaactggc cgagcgcgat gccgacgccg gcctcctcga actcctcggc
     1681 gaggatgttg gtgcggtggc cgcgcccgag gacgttcctg tcgatgaaca gattctcgta
     1741 ggtctggatg gccgacgtgg tcggattgag ggcgccggtg ctgccgacga agccgatatt
     1801 ctcgccgagg gcggacggcg gcgtgaagac gtagccggcg ccgatcatgc ggctctgcgg
     1861 cgtgccgtcg ccgataccct ggtggccgaa gagatcgacc gcgagcatgt gcaggctgtg
     1921 gcggtccgcc gagagggcga gggaatcgtc cggcgccagc ggctgcttgg cggccgcggt
     1981 catcctctcg ccgagcggca ctccctcatt cagggaggaa agtcgcagtc gcgccgcctc
     2041 ggcagccggg ttgagccgcg cccggttgat catttccagg acgagctgtt cctgaggggt
     2101 cagagccatg gcacatatcc tccgcgcaac ggcgcgcccg atcacgcgcc agcctgcacc
     2161 gtctcatccc gcgttggctg agtggcttgc atgtcccgcg gcgctctcgg cgagagcggg
     2221 gcatgtgccg ccctgtgatt cgttatgtca cgcgcccttt cgacgagtca gcgcaagccg
     2281 ctccacagcc agcactattc gcacgagggg aatgacaaaa ttactgcaaa atactactcc
     2341 catcgccttt gaggtcaacg gctgtccggc cgagttcggg accagcggcc acaaccgcac
     2401 gtacgtgcgc ctcattcgat a
//
LOCUS       DATAIQ010000673         1532 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_35015, whole genome shotgun sequence.
ACCESSION   DATAIQ010000673 DATAIQ010000000
VERSION     DATAIQ010000673.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1532)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1532)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1532
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_35015"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            133..549
                     /locus_tag="VHN20_11165"
     CDS             133..549
                     /locus_tag="VHN20_11165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020174976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopG family transcriptional regulator"
                     /protein_id="HEX2726371.1"
                     /translation="MSAKVQELRPRADSEKITINLGYVDLGHVDLLVEEGFYSNRTDF
                     IRTAIRSQLDRHGEAVRQSLARHQLDLGLRRYGREDLEAVRAAGETLHIQVLGLAVIA
                     DDVSPELARATIASIHVLGALQASPDVKAALRDRIR"
     gene            655..>1532
                     /locus_tag="VHN20_11170"
     CDS             655..>1532
                     /locus_tag="VHN20_11170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015952064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PHB depolymerase family esterase"
                     /protein_id="HEX2726372.1"
                     /translation="MNAFSKTDMKEATRLTREGKLAEAMAVLRKTLSAGPASPSASDR
                     GSDAGQGGATGTPPVLDMLPPAATGAAWTLPPSAQAQPSGASGNIGQPQVPDALRGFL
                     DRVGSLGRGGLGAHGLVAPSARPAPVPVPDGARFETRSHANAAGSRGYKLYVPSGFDG
                     QPLPLVVMLHGCTQSPDDFAAGTRMNELAEAQTFFVAYPEQPRSANANGCWNWFNAGD
                     QQRDRGEPSLIAGITQEVMRDFAVDAGRVYVAGLSAGGAAAAIMGATYPDLYAAIGVH
                     SGLACGAASDIPSAFAA"
BASE COUNT          226 a          579 c          496 g          231 t
ORIGIN      
        1 ccggaatgac aggtgggagt gatgaggcgc acgccctctc tgcgtgcgac caggaaaaat
       61 ccgccggccc cccttgcaag accgtccggt gatgctgatc ttaccatcca catggatggt
      121 gtgaggatgg tgatgagcgc caaggtgcag gagcttcggc ccagggccga cagcgagaag
      181 atcacgatca acctcggcta tgtcgacctc ggccatgtcg acctcctggt cgaggagggg
      241 ttctattcca accgcacgga tttcatccgc acggccatcc gcagccagct cgaccgccac
      301 ggcgaggccg tgaggcagtc gctcgccagg caccagctcg accttgggct gcgccgctac
      361 ggccgcgagg acctcgaggc cgtccgcgcc gccggcgaga cgctgcacat ccaggttctg
      421 ggcctcgccg tcatcgccga cgacgtctcg cccgagctcg cccgcgccac catcgcctcg
      481 atccacgtgc tcggcgcctt gcaggccagc cccgacgtca aggcggccct gcgcgaccgc
      541 atccgctgac tccgaactct tcggcccgag ctatgggctg aattctcaac ctctttttcc
      601 gacaacaagg gcgcgcctcc cgcattgccg cgcgccccga cacaggattg cccgatgaat
      661 gccttttcca aaaccgacat gaaggaagcc acccggctga cgcgcgaagg aaagctcgcg
      721 gaggccatgg cggttctgcg caagaccttg tccgccgggc ctgcgtcgcc gtccgcatcc
      781 gatcgcggca gcgatgcggg gcagggcggc gcgacgggca cgccgccggt tctcgacatg
      841 ctgccgccgg ccgccaccgg cgccgcgtgg acgttgccgc cgtccgcgca ggcgcagccg
      901 tccggcgcat ccggcaacat cggtcagccg caggtccccg acgcgctgcg cgggttcctc
      961 gaccgcgtcg gatcgctcgg tcgtggcggc ctcggcgcac atggcctcgt cgcgccttcg
     1021 gcgcggccgg cgcccgtccc cgtgccggac ggcgcgcgtt tcgagacgcg gagccacgcc
     1081 aacgccgccg gcagccgcgg ctacaagctc tacgtgccga gcggctttga cggccagccg
     1141 ctgccgctcg tcgtgatgct gcacggctgc acccagtcgc ccgacgactt cgccgccggc
     1201 acgcgcatga acgagctcgc cgaggcgcag acctttttcg tcgcctatcc ggagcagccg
     1261 cgctcggcca acgccaacgg ctgctggaac tggttcaacg ccggcgacca gcagcgcgat
     1321 cgcggcgagc cctcgctgat cgccggcatc acgcaggagg tcatgcgcga ttttgcggtc
     1381 gacgccggcc gcgtctacgt cgccggcctg tccgccggcg gcgccgcggc ggcgatcatg
     1441 ggcgccacct atccggatct ttatgcggcc atcggcgtgc attcgggcct cgcctgcggc
     1501 gccgccagcg acattccctc cgccttcgcc gc
//
LOCUS       DATAIQ010000674         4385 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_62085, whole genome shotgun sequence.
ACCESSION   DATAIQ010000674 DATAIQ010000000
VERSION     DATAIQ010000674.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4385)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4385)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4385
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_62085"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..980)
                     /locus_tag="VHN20_11175"
     CDS             complement(<1..980)
                     /locus_tag="VHN20_11175"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HEX2726373.1"
                     /translation="MIGENLGVFSILGTFMTEWKLSSFLYLGFLMSFFFALGSARKTL
                     RLRSEMNARVESEAQAHKLAREDALTKLPNRRRFVEAIEEITRRGPGGSCALLLIDLD
                     RFKLVNDALGHEAGDAVLRETARRLQAVTPDGGMAARLGGDEFAMLAPSTSPVEIMTL
                     AERLIAALSAPIEYGHTQGSVGATVGIALCPTDGFTPESLLRCADIAMYCGKRQGRST
                     YRFFEQAMDDELRDRASLETGLLSAITKGEIRPHYQPLVSMPDNAIRGFEVLARWYHP
                     QRGMLSPDLFIPMAEDTGLITELCYVLLRQACRDAETWPSHLTLSINISQ"
     gene            complement(1503..1835)
                     /locus_tag="VHN20_11180"
     CDS             complement(1503..1835)
                     /locus_tag="VHN20_11180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018319199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726374.1"
                     /translation="MYLVIRKFSRMRTVREAARRAESGIAQLMKQSPGFRGYYIFDAG
                     DGVAGSVTFFDDKESAAAANVKALAWIQASLSDLIHGEPEVISGEVLVVVTPENAAAL
                     PEDPTSRT"
     gene            2094..2336
                     /locus_tag="VHN20_11185"
     CDS             2094..2336
                     /locus_tag="VHN20_11185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726375.1"
                     /translation="MLKRVSTLLLLTGGALGGAGLTLLIAIAAERWSYGDECVSPNPS
                     RIETLFAPCLPKAQPNAQIADQVRPAPDVETTGSIR"
     gene            2369..2545
                     /locus_tag="VHN20_11190"
     CDS             2369..2545
                     /locus_tag="VHN20_11190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726376.1"
                     /translation="MPEPDPSSSPPQRQGAGQVRRLFPWSEAQAKLVLALLVAVVAAA
                     IIAAVAFRISLHID"
     gene            complement(2669..3718)
                     /locus_tag="VHN20_11195"
     CDS             complement(2669..3718)
                     /locus_tag="VHN20_11195"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF022072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX2726377.1"
                     /translation="MRKSRGNAGNFGLAARQVLNTLAGMAEERIETTVTIAAPPERVW
                     AVLTDFARMPDWNPLIGAIGGPLQVGARLSVLIALPGRPATRFRPLVLAADPGRELRW
                     RGSLVLPGLFDGEHYFLLKPDGARGVRVVHGEVFTGLLVGVIMRAGMVAATREGFEAM
                     NGALKREAEAKAVAEANLTRAPPEIRIEEERPEHCPAIDALTRAVFGGDYEADLMDRL
                     RSEGLVTGAFVALDGAEVVGHIALSDLPTEVDGRRVKAACVAPLTVSLAYRKLRIGAR
                     LVDKAVGVLRAKRYEAAFVIGDSQYYSRFGFSTAPARKIASPFPSSFMALELIPGALD
                     GTSGSVRYPRAFQLE"
     gene            3797..>4385
                     /locus_tag="VHN20_11200"
     CDS             3797..>4385
                     /locus_tag="VHN20_11200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011440569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3095 family protein"
                     /protein_id="HEX2726378.1"
                     /translation="MAGLPAIDGAADAAFYDRVPVFTSFAQLTDPAIYNALPDGWVLG
                     LSDIVQSTAAVGAGRYKAVNTAAAAVIAATANALNTADFPFVFGGDGASFALPPGSAE
                     LGGRALAAVAAWVRDEFGMTMRVALVPITAVRANGLDVRVARFAPSANVSYAMFNGGG
                     LAWAERQMKQGAFAVAPGDRGVRPDLAGLSCRFAEI"
BASE COUNT          746 a         1455 c         1438 g          746 t
ORIGIN      
        1 tgctgcgaga tgttgatgga gagcgtcaga tgggagggcc acgtttccgc atcgcggcag
       61 gcctgacgca gcagaacata gcacaattcg gtgatcagac cggtatcttc cgccatggga
      121 atgaacaggt ccggcgagag catgccacgt tgcgggtgat accagcgtgc cagcacctca
      181 aatccgcgga tggcgttgtc gggcatcgac acgaggggct ggtagtgcgg cctgatctcc
      241 cctttcgtga tggccgaaag caggccggtc tccagagacg cgcggtcgcg cagctcgtcg
      301 tccatggcct gttcgaagaa ccgataggtg cttcggccct ggcgcttgcc gcaatacatg
      361 gcgatgtcgg cgcagcgcag caggctctcc ggcgtgaagc cgtccgtggg gcacagagcg
      421 atgccgaccg ttgcgccgac gctgccttgg gtatgcccgt attcgatcgg ggccgacagc
      481 gccgcgatca accgctcggc cagtgtcatg atctcgaccg gagaggtgct cggcgcgagc
      541 atggcgaatt cgtcaccgcc gagccgcgcg gccatgccgc cgtcgggcgt tacggcttgc
      601 agccggcgcg ctgtttcgcg cagcaccgcg tccccagcct catgccccag cgcgtcgttg
      661 accagcttga acctgtcgag atcgatcagg agcaaggcgc agctgccgcc gggtccccgg
      721 cgggtaatct cttcgatcgc ttcaacgaac cggcggcggt tcggaagctt ggtcaaagcg
      781 tcttcccggg cgagcttatg agcctgcgcc tcggattcga cgcgggcatt catttcgctt
      841 cgtagccgaa gcgtcttgcg cgccgagcca agggcgaaga aaaaagacat gaggaagccg
      901 agatacagga agctcgagag cttccattcg gtcatgaacg tcccgaggat cgagaaaacc
      961 ccgaggttct cgccgatcac ccagaggcac tccgcaatga gcagcaggca gagaagctcg
     1021 tataacgcgc ctttctgcca cttcgtggtc gccgctttgt ccgagctttg attcaacggc
     1081 tctgcctttc cgcgccaagc gactggttgc cttggcccca ctgattacgg cacgaacgtc
     1141 cccgccaggg cacgccaacg cccatgagcc cggacggccg ggtctgcggc ccactaaacg
     1201 caacgaatcc caggacttac aaccaaattg ccacgtcatt acaaccaagt cgtaaacaca
     1261 tccttcgacg ttccggagtt tccggcgtgc ccctgggcgg gcgcagcgca tgctggcaac
     1321 gagttaaaga gccttggcgg tggtttgcgg gctctttcgg cggaatagtg ctggcccgca
     1381 cccaacagcc atttccacgg aagccggtcc gattcgccga agaaaacgtg gccgaacaac
     1441 agctagaatc gcgtcgacgt gagtggaacc ggcttgtgca ggtgcaaagg ccgcagccct
     1501 ggtcacgtcc tgctggtcgg gtcttccggc aaggctgcgg cgttttcggg agtcacgacg
     1561 accaacacct cgcccgaaat gacctcgggc tctccgtgga tcagatcact caggctggcc
     1621 tggatccacg cgagcgcctt gacgttggcc gcggcggccg attccttgtc gtcgaagaac
     1681 gtgaccgagc cggccacgcc atccccggca tcgaaaatat aatagccgcg gaagcccggg
     1741 gactgcttca tcaattgcgc aattccgctc tcggcgcgcc gcgccgcttc acgcaccgtg
     1801 cgcattcggc tgaacttgcg gatcaccaga tacatgggcg tgcgccgatg gctcgagggg
     1861 tgcggcgaag gctcggctgc ggacgcggtc ttgccgatcc caggatggca cggccgccgg
     1921 taaaaaacga gggccgccgc caggcgctcg gcaatcggca ctcgcagttc gcaagcggtc
     1981 gcccgacgag tgcccggcta cctcctgctg ccgggtgcct aatgtcgatg ccgcagagca
     2041 cggcgggcga accgaatgcc tgatcgggcg ttgtcaagga aaggcggcgc accatgctca
     2101 agcgcgtctc gacattgctt ctcttgaccg gtggcgcgct ggggggcgcc ggcttgactc
     2161 tcctgatcgc gatcgctgcc gaaagatggt cgtatggcga cgaatgcgtc tcgcccaatc
     2221 cgagccgcat cgagacattg tttgcgccct gtctgccgaa ggcgcagccg aacgctcaga
     2281 tcgccgacca ggttaggccg gctcccgacg ttgagaccac gggctcgatc cgctagtcca
     2341 gtgcacagcc gacgtatcac ggacgaccat gccggaaccc gacccctcct cttcacctcc
     2401 acagcgccag ggggcgggtc aggttcgccg gctgttcccg tggagcgaag cgcaggcaaa
     2461 gctcgtcctg gccctgctcg tggccgtcgt cgccgccgcg atcatcgcgg ctgtcgcctt
     2521 ccgcatcagc ctgcatattg actgaagcgg catcggcaga atcgtgccgt gccgcgggtg
     2581 agccggttcc ggcgggtgag ccggttccgc gacatccccg caagctgccg cgtgcgggcg
     2641 gccgtgtctc gccttcgttg atcgcgtcct actcgagctg gaacgcgcgg ggatagcgga
     2701 ccgagccgct cgtcccatcg agggccccgg gtatgagctc gagcgccatg aaggagctgg
     2761 gaaacggcga ggcgatcttg cgcgccggcg ccgtcgagaa accgaagcgg gaataatact
     2821 gcgaatcgcc gatcacgaac gccgcctcgt agcgcttggc gcgcaagacg ccgacggctt
     2881 tatcgacgag ccgggcaccg atccgcagtt tgcggtaggc caggctcact gtgagcggcg
     2941 cgacgcaggc ggccttcact cgccgcccgt ctacctccgt cggaagatca ctcaacgcga
     3001 tgtggcccac gacctcggcc ccgtcgaggg ctacgaacgc gcccgtgaca aggccttcgc
     3061 tgcgcagccg atccatcaga tcggcctcgt aatcgccgcc gaacacggcc ctcgtgagcg
     3121 cgtcgattgc cgggcaatgc tccggacgct cctcttcgat gcggatctcg gggggggcgc
     3181 gggtgaggtt cgcctcggcg accgccttcg cttccgcctc gcgcttgagg gcgccgttca
     3241 tggcctcgaa accctcccgg gtcgcggcca ccatgccggc gcgcatgatc acgccgacca
     3301 gcagcccggt gaagacctcg ccgtggacga cgcgcacccc tctcgcccca tcgggcttca
     3361 ggagaaaata atgctcgccg tcgaacaggc cgggcagcac gagagagccg cgccagcgca
     3421 gttcgcgccc gggatcggcg gccagcacga gcggccgaaa gcgcgtggca ggacgccccg
     3481 gcagggcgat cagcacggac aaccgcgcgc ccacctgcag tgggccaccg atggcgccga
     3541 tcaacgggtt ccagtccggc atgcgcgcaa aatccgtcag gacggcccag acgcgctcgg
     3601 gcggggcggc gatcgtgacc gtcgtttcga tgcgctcctc tgccatgccg gcgagtgtgt
     3661 tgagaacttg gcgcgctgcc aagccgaaat tgccggcatt ccctctggat ttgcgcatct
     3721 gcatcgtagg atttcgggta taccgctcat cgacggaagc catgaaggcg caggaatgac
     3781 agcccggatc gatgccttgg ctgggctgcc cgcaatcgac ggggctgccg atgccgcatt
     3841 ttacgaccgc gttccggtgt tcacgagctt cgcgcagctg accgatccgg cgatctataa
     3901 cgctctgccg gatggctggg tgctcgggct ttcggacatc gtgcaatcga cggcggcggt
     3961 cggggccggg cgctacaagg ccgtcaacac ggctgccgct gccgtgatcg cggcgaccgc
     4021 caacgcgctt aataccgccg atttcccgtt cgtgttcggg ggcgatggcg ccagcttcgc
     4081 gttgccgccg gggtccgccg aactgggtgg ccgggcgctc gctgccgtgg ccgcctgggt
     4141 gcgggacgag ttcggcatga ccatgcgcgt tgcgctggtc cccatcacgg cggtacgcgc
     4201 caacggtctc gacgtgcggg tcgcgcgctt tgccccttcg gccaacgtct cctacgccat
     4261 gtttaacggc ggcggcttgg cgtgggccga acggcagatg aagcagggcg cctttgccgt
     4321 ggccccgggt gatcggggcg tgcgcccgga cctcgccggc ctgtcctgcc gcttcgcgga
     4381 gatcg
//
LOCUS       DATAIQ010000675         3545 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_450470, whole genome shotgun sequence.
ACCESSION   DATAIQ010000675 DATAIQ010000000
VERSION     DATAIQ010000675.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3545)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3545)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3545
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_450470"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(32..565)
                     /locus_tag="VHN20_11205"
     CDS             complement(32..565)
                     /locus_tag="VHN20_11205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012454156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006282 - regulation of DNA repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RecX family transcriptional regulator"
                     /protein_id="HEX2726379.1"
                     /translation="MPEPRTDRLSTYLQRAALAYLERHASSSENLRRVLRRKLERRLR
                     IRGSGEELGDATLSRLVDEVVATCVRGKLVDDALYAAGKVGSLRRKGGSARAIEARLA
                     AKGVGRAVIATAIAEEGDPAEAEWLAAHARARRRRIGPYRAAERAAFRDKDMGALMRA
                     GFAFDLARRVIDGDALT"
     gene            878..1750
                     /locus_tag="VHN20_11210"
     CDS             878..1750
                     /locus_tag="VHN20_11210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018426660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEX2726380.1"
                     /translation="MSLAPLALVVVAAVVHATWNLLAKRAAAAGPTFVFASNVVSCVA
                     YLPWVAWIMATGTLTWSLPGLVCIAASGIIHLAYSLCLQRGYQVADLSVVYPVARGTG
                     PMLASLGAFVLLGEAPTPARVLGLLAVVAGIGLISTQGNIAGFRRSGGQAGVGWGAAT
                     GSLIASYSVVDACGVKTLGIQPVVLDWCASLLRLFALAPVVLYNPARARMLMQGRWLL
                     AVSVGLLAPLSYILVLTALELGAPLSFVAPAREMSMMVAALFGVLLLREPVGAARLAG
                     CLVLMVGVILLGAA"
     gene            2053..>3545
                     /locus_tag="VHN20_11215"
     CDS             2053..>3545
                     /locus_tag="VHN20_11215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="family 1 glycosylhydrolase"
                     /protein_id="HEX2726381.1"
                     /translation="MGDASRLELWGGAECTVARIGDAFRDQCAETGHVDRMQDLERIA
                     ELGIKCVRYPVLWETIAPHSPDAPEEASWRWHDERLARLRDLGIRVIATLCHHGSGPA
                     YTNLLDPAFPELLAQHAHRVARRYPWIDQYTAVNEPLTTARFSALYGHWYPHLTDYGA
                     FLRAVVNQCRATLLAMRAIRSVRADAALVQTEDLGKTFATPRLAYQAEHDNERRWLSF
                     DLLCGRVDREHPMWGFLTDWAKVGEDDLALLGAGDGAPDIIGVNHYLTSDRYLDHRTA
                     WYSERLHGGNGRDRYADVEAVRADLPASEIGPAARLREAWARYRRPIAVTEVHHGCTR
                     DEQLRWLMEVWKAALTVRAEGVDVRAVTLWALFGTVDWNSLLTRRDGIYEPGSFDTRG
                     TAPRRTALGAAAASLATAGAFDHPVLDSPGWWRRPGRHYRPPLTTEPAEDAPARRLLI
                     TGATGTLGRAFARICEHRGLAHVVTSRGELDAADPRSVDAALRRHRP"
BASE COUNT          508 a         1231 c         1236 g          570 t
ORIGIN      
        1 ataccgaaca aggcgaggag aagcgcactg ctcacgtgag cgcgtcgccg tcgatcacgc
       61 gccgggcgag gtcgaaggcg aagccggcgc gcatcagggc acccatgtcc ttgtcgcgga
      121 aggcggcgcg ctcggccgcg cggtacgggc cgatgcgacg ccggcgggcg cgggcgtgcg
      181 cggcaagcca ttcggcttcc gcgggatcgc cctcctcggc gatcgcggtc gcgatgacgg
      241 cccgcccgac gcctttggcc gccagccgcg cctcgatcgc gcgcgccgag ccgcccttgc
      301 gccgcaacga tccgaccttg cccgcggcgt agagcgcatc atccaccagc tttccgcgga
      361 cgcatgtcgc gacgacctcg tcgaccagcc gtgacagcgt cgcatcgccg agctcttcgc
      421 ccgaaccgcg gatgcgcaga cgccgctcga gcttgcgccg caggacgcgg cgcaggttct
      481 cggacgatga agcatgccgc tccagatagg cgagggcggc ccgctgcaga taggtggaca
      541 gacggtcggt gcgaggctcg ggcatgtcct gccggcccta tcacgaacga gccgatcccg
      601 cacgcgaggc agttgagcga cgcactcgct cgcgcagcgg ctgctgcgcg gcggcgagct
      661 gcatcaggag acgtgacgcc gttgacaggg ctccgggtgc atggggtaaa catgcgccat
      721 cgactgagtg gcaactaggg ttccgggcgg tccgacaagg ccgctgctgg tccgagcgtt
      781 gcggaaaccg cggcgatgcc gcggctgcac ccgagggaca aaagccccga ggaggagacg
      841 tcgagacact cgtgcgcaac gcccgcccgg aggtctcatg tcgcttgctc ctcttgctct
      901 cgtcgtcgtt gccgccgtcg tacacgcaac ctggaacctg ctcgccaagc gcgctgccgc
      961 ggccggtccg accttcgtct tcgccagcaa cgtggtgtcc tgcgtcgcct acctgccgtg
     1021 ggtggcatgg atcatggcca cgggcacgct gacctggagc ctgccgggcc tcgtctgcat
     1081 cgccgccagc ggcatcatcc atctcgctta cagcctgtgc ctgcagcgcg gctaccaggt
     1141 cgcggatctc tcggtcgtct atcccgtggc gcggggaacc ggaccgatgc tcgcctcgct
     1201 cggcgccttc gtgctgcttg gcgaggcgcc gacgccggca cgcgtgctcg ggctgctcgc
     1261 ggtggtggcc gggatcggac tcatctcgac gcaaggcaac attgccggat tccgccgctc
     1321 gggcgggcag gccggcgttg gttggggcgc cgcaaccgga tcgctcatcg ccagctacag
     1381 cgtggtcgac gcctgcggcg tcaaaaccct gggcatccag ccggtggtgc tcgactggtg
     1441 cgccagcctg ttgcgattgt tcgcgctggc acctgtcgtt ctttacaatc cggcgcgagc
     1501 caggatgctg atgcagggac gatggcttct ggccgtgagc gtcgggctgc tcgcgccgct
     1561 gtcctacatc ctcgtgctga cggccctgga gctgggggcg ccgctcagct tcgtcgcgcc
     1621 ggcgcgcgag atgtcgatga tggtcgccgc cctgttcggc gtgctcctcc tgcgcgagcc
     1681 ggtcggcgcc gcgcggctcg ccgggtgcct cgtgctgatg gtcggcgtca tccttctcgg
     1741 cgccgcgtga cgcgtctgct ttgcgcaggg cgcatggcgc cgaggcagca acaccgccca
     1801 tcttccgtgc gcgaatcgat gcatctcccg atgatgccgg gccccaggcg ggacggcgcg
     1861 acctaggatt tgcggctctt ccgaggccgt gccgcgcccc acggcgcagg gccacggttt
     1921 tttcacacac gttaacgtgc tgagcgcgct tcggaaattt ggaacaaacc gggagtaggc
     1981 gtcgtttccg gaactcgcga cgacgcgcag tcgttccata acaagggggc ctcacgggtg
     2041 acaatgacgg caatggggga cgcttccagg ctggagctct ggggtggtgc ggaatgcacg
     2101 gttgcccgaa tcggcgacgc gttccgcgac cagtgcgccg agacgggaca tgtcgaccgc
     2161 atgcaggacc tcgagcgaat cgccgagctc gggatcaaat gtgtgcgcta cccggtgctg
     2221 tgggaaacga ttgctccgca cagccccgac gctccggagg aggcaagctg gaggtggcac
     2281 gacgagcgcc ttgcgcgcct gcgtgatctc ggcattcgcg tcatcgccac cctgtgccat
     2341 catggcagcg gccccgcata cacgaacctc ctcgaccccg ccttccccga attgctggcg
     2401 cagcatgcgc accgcgtcgc gcgccgctat ccctggatcg accagtatac ggccgtcaac
     2461 gagccgctca cgacggcgcg cttcagcgcg ctctacggac actggtatcc gcatctcacc
     2521 gactatggcg cgttcctgcg cgcggtcgtc aaccagtgcc gcgcgacgct gctggcgatg
     2581 cgcgccatcc ggtcggtgcg tgcggacgcg gcactggtgc agaccgagga tctcggcaag
     2641 acgttcgcaa cgccgcggct tgcgtatcag gccgagcacg ataacgagcg gcgctggctg
     2701 agcttcgatc tgctctgcgg ccgcgtggac cgcgagcatc cgatgtgggg tttcctgacc
     2761 gattgggcga aggtcggcga ggacgacctg gcgctgctcg gcgcgggtga cggcgctccc
     2821 gacatcatcg gcgtgaacca ctacctcacc agcgaccgct atctcgacca ccgcaccgcc
     2881 tggtattcgg agcggcttca tggcggcaac ggccgggacc gttacgccga cgtggaagcc
     2941 gtgcgggccg atctgccggc gagcgagatc gggccggcgg cgcggctccg ggaagcgtgg
     3001 gcccgctacc ggcgtccgat cgccgtcacc gaggtccacc atggctgcac gcgcgacgaa
     3061 cagctgcgtt ggctgatgga ggtgtggaag gcggcgctca ccgtgcgcgc cgaaggcgtc
     3121 gacgttcgcg ccgtgacgct atgggcgctg ttcggcaccg tcgattggaa ttcgttgctg
     3181 acgcgcaggg acggcatcta cgaaccgggg tcgttcgaca cgcgcgggac ggcgccgcgc
     3241 cgcacggccc ttggcgccgc tgcggcctcc ctcgccaccg ccggcgcttt cgatcatcct
     3301 gtgctcgaca gcccgggatg gtggcgccgg ccgggccgcc attaccggcc accgctcacg
     3361 acggagccgg cggaggatgc gccggcgcgg cggctgctga tcaccggcgc caccggtacg
     3421 ctgggccggg cttttgcgcg catctgcgag caccgcggcc ttgcgcatgt cgtcacctcg
     3481 cgcggcgagc tcgacgctgc cgatccgagg agcgttgacg cggcgctgcg ccgccatcgc
     3541 ccctg
//
LOCUS       DATAIQ010000676         3200 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_404814, whole genome shotgun sequence.
ACCESSION   DATAIQ010000676 DATAIQ010000000
VERSION     DATAIQ010000676.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3200)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3200)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3200
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_404814"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..610
                     /locus_tag="VHN20_11220"
     CDS             <1..610
                     /locus_tag="VHN20_11220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009735716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HEX2726382.1"
                     /translation="VVTVEGTGIEKMSDLKGKRVSTGSPGSATEVMAFRVIEAAGLDK
                     DKDMKRERLGVAESVNALKDRKIDAFFWVGGIPTAAVTDLGATPGVKIKLIDHADVVE
                     KMNAKYGKLYSPGVIKAGSYPGQDKDNQITDVWNILVTGGSMSDDDAYKIVKTLVERK
                     ADLVAVHKEAESFSLDNQVQECSPIPFHPGALRYFKEQGVKG"
     gene            complement(819..1055)
                     /locus_tag="VHN20_11225"
     CDS             complement(819..1055)
                     /locus_tag="VHN20_11225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726383.1"
                     /translation="MAERNNLNWQNLLTVISVLILVGAEVFGVALAGAWAIAGLFELG
                     DVISYVLMALFCLIGVYALVVLWRRAVLIEPIWR"
     gene            1139..2734
                     /locus_tag="VHN20_11230"
     CDS             1139..2734
                     /locus_tag="VHN20_11230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015821618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase family protein"
                     /protein_id="HEX2726384.1"
                     /translation="MPDTPVFSGAAVAAPHQLAAEAGRAVLGEGGNAIEAMVAMAATI
                     AVVYPHMNALGGDAFWLVHEPGGRVRGIDASGPAGSLATIRRYRDKGYDAIPPRGPDA
                     ALTVAGAVGGWQVALDYARRLGGKTPLALLLHEAIRLSRDGYPVSASEAREEAKEIEA
                     LTNAPGFAETFFVEGKPAAAGTLRRLPALADTLSQLADAGLDDFYRGDVGREIAADLE
                     RIGSPVTRADLEGYRAGAMEPLTTRLQNVTLYNSPPPTQGLASLLVLGIFERLGVERG
                     ESVEHHHGLIEATKRAVAIRDRVVTDPRHLTHDPQAFLTASVFEREAALIDRRRAAPF
                     PLPPAEGDTVWMGAIDATGLAVSYIQSIYWEWGSGCVLPRTGIHLQNRGVSFSLDPNA
                     RNPLAPGRKPFHTLNVPIAVFADGRVMAYGAMGGDGQPQFQAQIFTRYAKFGMGVADA
                     VDAPRWLLGRTWGTTTTSLKLESRFEPSLIQGLARLGHDVEEQPRPYWEDFGHAGMLV
                     KQPRDGRVEATHDPRSDGGAVGL"
     gene            complement(2739..>3200)
                     /locus_tag="VHN20_11235"
     CDS             complement(2739..>3200)
                     /locus_tag="VHN20_11235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase-like cysteine peptidase"
                     /protein_id="HEX2726385.1"
                     /translation="TAEVWQTLLMVNRTVNDRITAISDREHWGIEDRWNLPSDGYGDC
                     EDIQLLKRKELIERGFPRRAMRMTVVIDEDGDGHAVLMVRTDKGDLILDNRRMAILPW
                     TKTGYVFIKREGQDGREWVSLGGISSPVVTAHNDDAAQPPSLLSPARVASR"
BASE COUNT          528 a         1110 c         1072 g          490 t
ORIGIN      
        1 cgtggtgacc gtcgagggca ccggcatcga gaagatgtcc gatctgaagg gcaagcgggt
       61 gtcgaccggc tcgccgggca gcgccaccga ggtcatggct ttccgggtga tcgaggccgc
      121 cgggctcgac aaggacaagg acatgaaacg cgagcgcctc ggcgtcgccg agtccgtcaa
      181 cgcgctcaag gaccgcaaga tcgacgcgtt cttctgggtc ggcggcattc cgaccgcggc
      241 ggtgaccgat ctcggcgcga cgcccggggt caagatcaag ctcatcgacc acgccgacgt
      301 ggtcgagaag atgaacgcca aatacggcaa gctctacagc ccgggcgtca tcaaggccgg
      361 ctcgtatccc gggcaggaca aggacaacca gatcaccgac gtgtggaaca tcctggtcac
      421 gggcggcagc atgtccgacg acgacgccta caagatcgtc aagacgctgg tcgagcgtaa
      481 ggcggatctc gtcgccgtgc acaaggaagc cgagagcttt tcgctcgaca accaggtgca
      541 ggagtgctcg ccgatcccgt tccacccggg cgcgctgcgt tacttcaagg aacaaggcgt
      601 caaggggtga agcaaatccc tcccggcgga cctcgggtgt tcccgagatc cgcccgacaa
      661 gtgcgcaagt cgggaacccg acttgcgagg ggagggccga ctcgcgcagg gaccggggcg
      721 gggcggaaac gctacccttt ggtctgctga cgtggacacc caccggctcg gacgctgtcg
      781 cgtccgagtc caccctcccc tcgcgaggtg ggattaagct agcgccagat cggttcgatc
      841 agcacggcgc ggcgccacag cacgaccaag gcgtagacgc cgatcaggca gaacagggcc
      901 atcagcacgt agctgatgac gtcgccaagc tcgaacaggc cggcgatcgc ccacgcccct
      961 gccagggcga cgccgaagac ctcggcgccg accaggatca gcacgctgat cacggtcagg
     1021 aggttctgcc agttgaggtt gttgcgctcg gccaaggtcg atttctccat tgtcgcccgg
     1081 atggcactac cttaagcctg ccgtccggcg caatcatcct gtggcaatca gcctccctat
     1141 gcctgacacg cctgtttttt ccggggcggc ggtcgccgct ccgcaccagc tcgcggccga
     1201 agccggacgc gccgtcctgg gcgagggcgg caacgccatc gaggcgatgg tggcgatggc
     1261 cgccacgatc gctgtcgtct acccgcacat gaacgccctc ggcggcgatg ccttctggct
     1321 cgtgcacgag ccgggcgggc gcgtgcgcgg catcgacgcc agcggcccgg cggggtcgct
     1381 cgccacgatc aggcgctacc gcgacaaagg ctacgacgcg attccgccgc gcgggcccga
     1441 tgcggccctg accgtcgccg gcgcggtcgg cggctggcag gtggcgctcg attacgcacg
     1501 acgccttggg ggcaagacgc cgctcgccct tcttctgcac gaggcgatcc gcctgtcgcg
     1561 cgacggctat ccggtctcgg cctccgaagc gcgcgaggag gcgaaggaga tcgaagccct
     1621 gacgaacgct cccggctttg ccgagacctt cttcgtcgaa ggcaagcctg ccgcggccgg
     1681 caccctccgc cgcctgccgg cgctggccga taccctgtcg caactcgccg atgcgggcct
     1741 tgacgatttt tatcggggcg acgtcggccg cgagatcgcg gccgacctgg agcgcatcgg
     1801 cagcccggtg acccgcgccg atctcgaagg ctatcgcgcc ggcgcgatgg agcctctgac
     1861 gacacgcctg cagaacgtca cgctctacaa ctctccgccg ccgacgcagg ggctcgcctc
     1921 gctcctggtc ctcggcatct tcgagcggct cggcgtcgag cgcggcgaga gcgtcgagca
     1981 tcatcacggc ctcatcgaag cgaccaagcg cgccgtcgcc atccgcgatc gcgtcgtcac
     2041 ggatccgcgc cacctcacgc atgacccgca ggccttcctg accgcgtcgg tgttcgagcg
     2101 cgaggcggcg ctgatcgacc ggcgccgtgc ggcgccgttc ccgttaccac cggcggaggg
     2161 cgacacggtc tggatgggcg ccatcgacgc gaccgggctc gccgtgtcct acatccagtc
     2221 catctactgg gaatggggat cgggctgcgt gctgccgcga accggcatcc acttgcagaa
     2281 ccggggcgtg tcgttctccc tcgatccgaa tgcgcgcaac ccgctcgcgc ccgggcgaaa
     2341 gccgttccat acgctgaatg tgcccatcgc cgtgttcgcg gacggccgcg tcatggccta
     2401 tggcgcgatg ggcggcgacg gccagccgca attccaggcg cagatcttca cgcgctacgc
     2461 gaaattcggg atgggcgtgg ccgacgcggt cgacgccccg cgctggttgc ttggccgcac
     2521 ttggggcacg accacgacca gcctcaagct cgaaagccgg ttcgagccgt cactgatcca
     2581 gggactggcg cggctcggcc acgacgtcga ggaacagccg cgcccctatt gggaggattt
     2641 cggccatgcc ggcatgctgg tgaagcagcc gcgcgacggc cgggtcgagg ccacgcacga
     2701 tccgcgctcg gacggcgggg cggtcggctt gtgaggcgtc agcgcgacgc cacgcgggcc
     2761 ggcgacagca gcgacggcgg ctgcgcagca tcgtcgttgt gggcggtcac gacaggcgag
     2821 ctgatcccgc cgagcgacac ccattcgcgg ccgtcctggc cctcgcgctt gataaagacg
     2881 tagccggtct tcgtccacgg caggatcgcc atgcgccggt tgtcgaggat caggtcgccc
     2941 ttgtccgtgc gcaccatcag cacggcatgg ccgtcgccgt cctcgtcgat caccaccgtc
     3001 atgcgcatgg cgcggcgcgg aaacccgcgc tcgatgagct ccttgcgctt gaggagctgg
     3061 atgtcctcgc aatcgccgta gccgtcgctc ggcaggttcc agcggtcctc gatgccccaa
     3121 tgctcacgat cgctgatcgc cgtaatgcgg tcgttgacgg tgcggttcac catcagcagc
     3181 gtctgccaga cctccgccgt
//
LOCUS       DATAIQ010000677         3109 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_200716, whole genome shotgun sequence.
ACCESSION   DATAIQ010000677 DATAIQ010000000
VERSION     DATAIQ010000677.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3109)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3109)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3109
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_200716"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..671)
                     /locus_tag="VHN20_11240"
     CDS             complement(<1..671)
                     /locus_tag="VHN20_11240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003597801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HEX2726386.1"
                     /translation="MLRRFAAALSVGVALNVASAGIAFAPAGVALADVVAPDEDVGSP
                     RQVVVAHHADILAAAAEPVTALTALPAAVHVEILGEDETGALVPSPECDESEVAERHR
                     ADVRRLLEKGATGAAPLPNEPIEFGAVKIPRRIVETILRASEVTGVDPVYMMALADKE
                     SSFAPDVKAATSSAEGLFQFIVRTWLDVVREFGAKHGLHEEAAAVELVDGEPKILDEA
                     MRERVL"
     gene            973..1518
                     /locus_tag="VHN20_11245"
     CDS             973..1518
                     /locus_tag="VHN20_11245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726387.1"
                     /translation="MIHDIRADVLGAPEVAMIRTGVAVLALAWSVAAAPVAAQTAAEA
                     KDLAAMGDRSADLANSYLRLWSSSNAAALADVHEIYAPRVRFFGRGMDRRGLAAEKKR
                     FVRRWPIRSYAHRPGTMRVQCNPTTRACVVKSIIDWKAAAPQRHAVSRGSSRFELGVD
                     FSGPQPLVLYENGGVISRRRS"
     gene            complement(1575..2078)
                     /locus_tag="VHN20_11250"
     CDS             complement(1575..2078)
                     /locus_tag="VHN20_11250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003598253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HEX2726388.1"
                     /translation="MGLFSKSIKTMDDLFVHTLQDIYYAENQIAKSLPKMIEKATNAQ
                     LKQGFQIHLKETEGHIKRLEDVFRMHGHEPKGTDCPAIDGIIKEANAIIGDIDDKDVC
                     DAALVAAAQAVEHYEITRYGTLVAWAKQLGRNDCASVLHQNLVEEKATDEKLTKLAEA
                     SVNRKAA"
     gene            2485..>3109
                     /locus_tag="VHN20_11255"
     CDS             2485..>3109
                     /locus_tag="VHN20_11255"
                     /inference="COORDINATES: protein motif:HMM:NF024267.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS-domain containing protein"
                     /protein_id="HEX2726389.1"
                     /translation="MHELLAKQLAEATLASGEIDLATLTRLVSSVYHDADREQQRGEH
                     AAPVKGGKAGPLNAGREQLLAELKTQNLRFETAVENMTQGLCMFDGEQKLIICNRHWL
                     DLFGLAPALGKPGTSFRTIMEARLANGHYPGRTIDELLAERASIHKERKARTFEQRLR
                     DGRVVQTYHQPMAEGGWVATFEDITERALAGEMRLFIVQLRPAWSLER"
BASE COUNT          529 a          984 c         1036 g          560 t
ORIGIN      
        1 aggacacgct cccgcatggc ctcatcgagg atcttcggct cgccgtcaac gagctcgacg
       61 gcagccgctt cctcgtgcag gccgtgcttc gctccgaact cacggaccac gtcgagccac
      121 gtcctcacga tgaactggaa caggccttcc gccgacgacg tggcggcttt gacgtcgggc
      181 gcaaagctgg attccttgtc agccagcgcc atcatgtaga ccgggtcgac gccggtcacc
      241 tcggaggcgc gcaggatcgt ctcgacgatg cggcgcggga tttttacggc gccgaattcg
      301 attggctcgt taggaagcgg agcggcaccc gtcgccccct tctcgagcag gcggcgcacg
      361 tcggcgcggt gccgttcggc gacttccgac tcgtcgcatt ccgggcttgg caccaaggcg
      421 cccgtctcgt cttcgcccag gatctctacg tggaccgcgg caggcagcgc cgtgagggcg
      481 gtcaccggct cggcggccgc ggcgagaatg tccgcatggt gcgcaacgac cacctggcga
      541 ggagacccga cgtcttcatc gggcgcgacg acatccgcca aggcgacgcc ggcgggagcg
      601 aaggcgatgc cggcggacgc gacgttgagc gcgacgccca ccgagagggc agccgcgaaa
      661 cgccgcaaca cgcaaccaat cagcttgcga ggagcgaggc agagagcttg ggattcgcgg
      721 ggccgcagcc aaacgacttc cgcatcgctg tggacaaaat ccgagcgttc acaggcgtcg
      781 tgagacgccg ttgcaagtgc gtgcattctg cccccggccc cgctgaacgc cggctgttta
      841 gcgcctggcg tcgtgattcc ttatgcgggc gtcgaggtgg acgagcgata tggccagaat
      901 gggtcagcgt agccgtaagg cgggttcggg aagcgcggag ggcgcctctt gaaccgagct
      961 tcctgtgcgg cgttgatcca cgatatcaga gccgatgtgc tcggtgcgcc ggaggtggcg
     1021 atgattcgaa caggtgttgc ggtgctcgcg ctggcatggt cggttgcggc cgctccggtt
     1081 gcagcacaaa ccgccgccga ggcgaaagac ctcgccgcca tgggcgaccg atcggcggac
     1141 ctcgccaatt cctatcttcg cctgtggtcg tcgagcaacg cggccgcgct tgctgacgtg
     1201 cacgagatct atgcgccgcg cgtcaggttc ttcggccgcg gcatggaccg acgcggcctc
     1261 gcggcagaga agaaacgttt cgtccgccgc tggccgatcc ggtcatatgc ccatcgtccc
     1321 ggcaccatgc gcgttcagtg caatccgaca acccgtgcct gcgtggtcaa gtcgatcatc
     1381 gattggaaag cggctgcgcc gcagcgccac gcggtatcgc ggggctcctc caggttcgag
     1441 ctgggcgtcg acttctcggg accgcagccg ctggttctct atgaaaacgg cggcgtgatt
     1501 tcacggcgac ggtcgtaaaa acgccgccgc cgcgtgagcg gcggcggtcg catcgtgcga
     1561 gcgatggcgt tgtcttaggc cgccttgcga ttgacgcttg cttccgcgag cttggtgagc
     1621 ttctcgtcgg tcgctttctc ctcgacgagg ttctgatgga gcacgctggc gcaatcgttg
     1681 cggccaagct gcttggccca ggcgacgagc gtgccgtaac gcgtgatttc gtagtgctcc
     1741 accgcctggg cggcggccac cagggcggcg tcgcagacat ccttgtcgtc gatgtcaccg
     1801 atgatcgcgt tggcttcctt gatgatgccg tcgatggccg gacaatcggt gcccttcggc
     1861 tcgtgaccat gcatgcggaa cacgtcctcg agacgcttga tgtgcccttc cgtctccttc
     1921 aggtggatct ggaacccctg cttcaattgc gcattcgtcg ctttctcgat catcttcggc
     1981 agggacttcg cgatctggtt ctccgcgtaa tagatgtcct gcagcgtatg cacgaagaga
     2041 tcatccatcg tcttgatcga cttcgagaac aggcccatgg ttgaactcct cacggaaagc
     2101 agttgccgcg gccgtgcggg tcgcacgcgc gggtcatcct ggagaacgtt gcccaggtcg
     2161 ggcggttccc accgggagca ggctcaaggc cgctgcggcc cccaagctcc gccttgattt
     2221 ctgcgctccg gccggccccc tcccgcgtgg tgagaaggta gatcacgtcc agagcacgaa
     2281 cggacaaagt ggccagcact ttgccgaggc ttgtccccga ccctgtgcag cgacgacgac
     2341 tgcaacagca ttgcgggaga cgcagggtcg ctccgcagag agaggccggg gcgcgtccac
     2401 taagcagatt tttaatgttc cgtcgccaga atggattgtt tcttagccga ccattgcggg
     2461 tggcgctccg gagcggttcg cgacatgcat gagcttctgg ccaagcagct cgcggaggcg
     2521 acgctggctt cgggggaaat cgatctggct acgctgaccc ggcttgtcag cagcgtctat
     2581 catgacgccg atcgggagca gcagcggggc gagcacgccg ctccggttaa aggcggcaag
     2641 gcggggcctc tcaacgccgg tcgcgagcag ctgctggccg agttgaagac gcaaaacctc
     2701 cgcttcgaaa ccgcggtcga gaacatgacg caagggctgt gcatgttcga cggcgaacaa
     2761 aagctgatca tctgcaacag acactggctg gatctttttg ggctggcccc ggccctcggc
     2821 aagccgggca cgagcttccg cacgatcatg gaagcgcggc tcgcgaacgg gcattatccg
     2881 ggacgcacga tcgacgagct gctcgccgag cgcgcttcga ttcacaagga gcgcaaggcc
     2941 aggaccttcg agcagcggct gcgggacggg cgcgtggtgc agacctatca ccagccgatg
     3001 gccgagggcg gctgggttgc cacgttcgag gacatcaccg aacgagccct cgcgggtgag
     3061 atgcggctgt tcatcgtgca gctgcgcccg gcctggtcgc tcgagcgga
//
LOCUS       DATAIQ010000678         1994 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_338744, whole genome shotgun sequence.
ACCESSION   DATAIQ010000678 DATAIQ010000000
VERSION     DATAIQ010000678.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1994)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1994)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1994
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_338744"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..973
                     /locus_tag="VHN20_11260"
     CDS             <1..973
                     /locus_tag="VHN20_11260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012564256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX2726390.1"
                     /translation="EIQGQHHGMFVEPDYRASAEYRAFWDMLSRGEYQAAEYKRVGKG
                     GREVWIMASYNPIFDASGKLFKVVKFATDITAAVQRRAARAAAQKSIDGDLDEISAAV
                     SLANEQAAGAASASTQVSSTVQAVAAGAEELVASISEISQQVSAALKISVEAVDQARQ
                     TNTIISGLDTAAQKIGKVVELIEQIASQTNLLALNATIEAARAGDAGKGFAVVAQEVK
                     TLAAQTAKATEEIGAQIAQTQAATTEAVKAIGTIVTTIGTINEISSAIAGAVEEQNSV
                     TREISGNMQTAAEGVTAISGSVSEIARSTRFVDDGTRKVREASRALG"
     gene            complement(1010..1561)
                     /locus_tag="VHN20_11265"
     CDS             complement(1010..1561)
                     /locus_tag="VHN20_11265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEX2726391.1"
                     /translation="MPRLPDIVVESLTPDQRRVYDAILSGPRGVVQGPLRVWLNSPEL
                     ADRAQALGAFCRYYTTLPPRLSELAIITMGAYWKAGFEWAVHAPIALEAGLDPAAVEA
                     IRKGEPPRLDKPDEAALHAFAHELLHDRKVSDATYRRAEKELGARALVDLVGILGYYG
                     LISMTIVAFEVPLPEGAKEPFAD"
     gene            1590..>1994
                     /locus_tag="VHN20_11270"
     CDS             1590..>1994
                     /locus_tag="VHN20_11270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012383572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HEX2726392.1"
                     /translation="MKLFGYWRSLATLRVRIALNLKGLAAEETMIDLMAGQQRAPDYR
                     AVNPQMVLPALIDGDGPALFQSLAILEYLDERHPQPPLLPADARGRARVRGLAQIVAC
                     DTHPLIVPRIREYLAEQFGLDEAQRLGWIRHWI"
BASE COUNT          342 a          670 c          698 g          284 t
ORIGIN      
        1 cgagatccag gggcagcatc atggaatgtt cgtggagccg gactaccgcg ccagcgccga
       61 ataccgggcg ttctgggaca tgctcagccg tggcgagtat caggcggcgg aatacaagcg
      121 cgtcggcaaa ggcggtcgcg aggtctggat catggcctcg tacaacccga tcttcgatgc
      181 gtccggcaag ctgttcaagg tcgtgaaatt cgcgaccgac atcaccgctg cggtccagcg
      241 gcgggccgcg cgggccgcgg cccagaagag catcgacggc gatctcgacg agatcagcgc
      301 cgccgtgtcg ctcgctaacg agcaggccgc cggggcggca agcgcgtcga cgcaggtatc
      361 ctccaccgtg caggcggtcg cggccggcgc cgaggaactg gtcgcgtcga tttcggagat
      421 cagccagcag gtcagcgctg ccctcaagat ctcggtagag gcggtggatc aggcgcggca
      481 gacgaacacg atcatctccg gcctcgacac cgccgcgcaa aagatcggca aggttgtcga
      541 gttgatcgag cagatcgcct cgcagaccaa cctgctcgcg ctcaacgcga ccatcgaggc
      601 ggcgcgcgcc ggcgacgccg gcaagggctt tgcggtcgtc gctcaggagg tcaagaccct
      661 ggctgcgcag accgccaagg cgacggagga gatcggcgcg cagatcgcgc agacccaggc
      721 cgcgacgacg gaagccgtca aggcgatcgg cacgatcgtg acgacgatcg ggacgatcaa
      781 cgagatctcg tccgccatcg ccggagccgt cgaggagcag aactcggtga cacgtgagat
      841 atcgggcaac atgcagacgg ccgccgaagg agtgacggcg atcagcggca gcgtgagcga
      901 gatcgcgcgc tcgacgcggt tcgtcgacga cggcacgcgc aaggtccgcg aagcgtcccg
      961 ggcgctgggc taggtcggga ccaatcctgc ccgcgatagc gcgagcagct cagtccgcga
     1021 acggctcctt ggcgccttcc ggcagcggca cctcgaaggc gacgatggtc atcgagatca
     1081 agccgtaata gccgaggatg ccgacgagat cgacgagggc gcgcgcgccg agctctttct
     1141 cggcgcgcct gtaggtggcg tccgacacct tccggtcgtg cagcagctcg tgcgcgaagg
     1201 cgtgcagcgc cgcctcgtcg ggcttgtcga gccgtggcgg ctcgcccttg cggatcgcct
     1261 cgactgccgc cgggtcgagc ccggcctcca gcgcgatcgg cgcgtgcacc gcccattcga
     1321 agcccgcctt ccagtaggcg cccatggtga tgatcgcgag ctcggagagc cgcggcggca
     1381 aggtggtgta gtagcggcag aaggcgccga gcgcctgcgc ccggtcggcg agctccggcg
     1441 aattcagcca aacgcgcagc gggccctgga cgacgccgcg cggccccgac aggatggcgt
     1501 cgtagacgcg gcgctggtcc ggggtgaggc tttcaaccac gatatcgggc aggcgcggca
     1561 tcggtgatcc tttcggcggg gtgctcgaga tgaagctgtt cggctactgg cgttcgctcg
     1621 cgacgctgcg cgtgcgcatc gcgcttaacc tgaaagggct tgcggctgaa gagaccatga
     1681 tcgacctgat ggcggggcag cagcgcgcgc cggactatcg ggccgtcaat ccgcagatgg
     1741 tcctgcccgc cctgatcgac ggcgacggcc cggccctgtt ccagtccctc gccatcctcg
     1801 aatatctcga cgagcgccat ccgcagcccc cgctcctgcc ggcggatgcg cgcggccgcg
     1861 cccgcgtgcg cggcctcgcc cagatcgtcg cctgcgatac ccatcccctg atcgtgccgc
     1921 gcatccgcga atacctggcc gagcagttcg gcctcgacga ggcccagcgc ctcggctgga
     1981 tccgccactg gatc
//
LOCUS       DATAIQ010000679         1855 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_200791, whole genome shotgun sequence.
ACCESSION   DATAIQ010000679 DATAIQ010000000
VERSION     DATAIQ010000679.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1855)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1855)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1855
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_200791"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(67..1266)
                     /locus_tag="VHN20_11275"
     CDS             complement(67..1266)
                     /locus_tag="VHN20_11275"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009210268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004185 - serine-type carboxypeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase"
                     /protein_id="HEX2726393.1"
                     /translation="MGVVRWRRLVALGCALLLMPAQALAGAREKVAALAPSGVVLVLD
                     EKGNELVARNADKPFVPASVTKIVTAWLAMEVLGADYRFETRFYLDGDRVLYIRGGGD
                     PFLISEELAQLASALVAATGRQPLRGILLDPSYYPSDIRIPGIEDTDEAYDALNSALA
                     VNFNTIHAVRKGKTVQSAEKQTPITPLAISQFLARGAQGRGRISLTQDPGVGLQYAGE
                     LIAAFIERAGGSVTGRISTGVVPEGLEPVYVHRQSRPLSDILAGLLGSSNNYIANQVF
                     LEIGGRRLGGPVSLEKSLRVANEMLARHGLAGSVRLEEGSGISRGNRFTARGLAQLLQ
                     LFAPHATLLRQGDGARFKTGTFSGVRTLAGYVDTSGHGRVRFVIALTSNDGGLRFRLL
                     KAIQAEL"
     gene            complement(1427..>1855)
                     /locus_tag="VHN20_11280"
     CDS             complement(1427..>1855)
                     /locus_tag="VHN20_11280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015685786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX2726394.1"
                     /translation="DVISYLGFNVALRPWAEKNGPTLERFLAALSEADQWMRANPKQA
                     AQVATRWIPGLRLDVAEAAMAFNVEQNDRRLSAHNYRALHSAQERLHRLGFIKSTFDV
                     NKHIEPKHIVAITEKNTALFSDLPPIPPDVRIGKDFVFKP"
BASE COUNT          285 a          603 c          664 g          303 t
ORIGIN      
        1 gacgctcgcg acgctgatcg aatagatgcg atgcttcgtc atgcgtcctc ctcgacgcgc
       61 atctcgctac aactcggcct ggatggcttt gaggagccgg aagcgcagcc cgccgtcgtt
      121 gctcgtcagc gcgatcacga agcgcacccg cccatgccct gacgtgtcga catagcccgc
      181 cagggtgcgg acgccggaaa aggtgccggt cttgaagcgg gcgccgtcgc cttggcggag
      241 cagggtggca tgcggcgcga agagctgcag cagctgcgca aggccgcgcg ccgtgaagcg
      301 gttgccgcgg ctgatgcccg agccttcctc gaggcgaacg gacccggcga ggccgtgcct
      361 ggcgagcatc tcgttcgcga cccggagcga tttctcgagg ctgacggggc cgcccaggcg
      421 acgcccgccg atctccagga aaacctggtt ggcgatgtag ttgttcgagc tgcccagcaa
      481 cccggcaagg atatccgaaa gggggcgtga ctggcggtga acgtagaccg gctccaggcc
      541 ctcgggcacg acgccggtcg agatcctgcc cgtgacgctg ccgccggccc gctcgatgaa
      601 tgcggcgatc agctcgccgg catattgcag gcccacgccc gggtcctggg tcaggctgat
      661 gcgaccgcgg ccctgagcgc cgcgcgccag gaactgactg atggcaagcg gggtgatcgg
      721 cgtctgcttc tcggcggact ggaccgtctt gcccttgcgc acggcgtgga tggtgttgaa
      781 gttcaccgcg agcgcggagt tcagcgcgtc gtaggcctcg tcggtgtcct cgatgccggg
      841 gatgcggatg tcggaggggt agtagctcgg gtcgagcaag atgccgcgca gcggctgcct
      901 gccggtcgcg gcgaccagcg ccgacgcgag ctgagccagc tcttcggaga tcaggaaggg
      961 atcgccgccg ccgcggatgt agagcacccg gtcgccgtcg aggtagaagc gggtctcgaa
     1021 gcggtagtcg gcgcccagca cctccatcgc cagccaggcg gtcacgatct tggtgacgga
     1081 ggccggcacg aagggcttgt cggcgttccg ggccaccagc tcgttgccct tttcgtccag
     1141 cacgagcacc acgcccgacg gtgcgagcgc cgcgaccttc tccctggcgc cggccagggc
     1201 ttgcgccggc atcaggagca gcgcgcagcc gagggcgacg aggcgacgcc acctcacgac
     1261 gcccaccggt gcccaccaat tcggcttcgc gttgcgtctc gatggttggc tcaacatggc
     1321 gctatgtctc attggcccgg atgacacgtc cgggaaggtc cgttttcgcg ccgctgtcgg
     1381 gcgcgccggc tgctgacggg cgaaacggct cgtcaacgcc gcggcatcac ggcttgaaca
     1441 cgaaatcctt gccgattcgc acgtccggcg ggatgggcgg caggtcggag aacagcgccg
     1501 tgttcttctc cgtgatggca acgatgtgct tcggctcgat gtgcttgttc acgtcgaagg
     1561 tcgacttgat gaagccgagg cggtgcaggc gctcctgcgc gctgtgcagg gcgcggtaat
     1621 tgtgcgccga cagccggcgg tcgttctgct cgacattgaa ggccatggcg gcttcggcca
     1681 cgtcgagccg gaggcccggg atccagcggg tggcgacctg cgccgcctgc ttcgggttgg
     1741 cccgcatcca ctggtccgcc tccgacaggg cggccaggaa gcgctcgagc gtcgggccgt
     1801 tcttctcggc ccaggggcgc aaggcgacgt tgaagccgag ataggagatc acgtc
//
LOCUS       DATAIQ010000680         1843 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_312666, whole genome shotgun sequence.
ACCESSION   DATAIQ010000680 DATAIQ010000000
VERSION     DATAIQ010000680.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1843)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1843)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1843
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_312666"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..458)
                     /locus_tag="VHN20_11285"
     CDS             complement(<1..458)
                     /locus_tag="VHN20_11285"
                     /inference="COORDINATES: protein motif:HMM:NF012339.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HEX2726395.1"
                     /translation="MAQITLTGTDIAFDCNDDTILRAALRNGLGFPYECNVGSCGNCR
                     FELLEGEVAHDRVDAPAWNDRDRQRKRYLGCQARPHSDCRIKVNLRDHYKSLHKPVRT
                     QARLLAIDDVTHDIREFRFRLADPAPFLPGQYALLYVPGVEGGRAYSMCN"
     gene            complement(495..1328)
                     /locus_tag="VHN20_11290"
     CDS             complement(495..1328)
                     /locus_tag="VHN20_11290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007754075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
                     /protein_id="HEX2726396.1"
                     /translation="MDRQSDTGSDASLAGEEAARSSEKRLSSVAAAIALLKAFSEDEV
                     DIGVSTLAKRLGMAKSTVHRLATTLVSEGMLEQNPENGKYRLGITLFSLGALVRRRMD
                     VSTEAKPYLFDLRETTGETVHLAILDRTDIMYVYNLESTQAIRMRSDIGVRKPAYCTA
                     EGLAMLAFQPSSLVDEIIAGGLQPRTAKTNTDPRRLREVLAAVRERGYAVEDEESEAG
                     MRCVAAPVRNATRDVVGAVGIAGPVQRLPDDLLASFAPHVVRTAEAISVRLGYRSGAT
                     F"
     gene            complement(1419..>1843)
                     /locus_tag="VHN20_11295"
     CDS             complement(1419..>1843)
                     /locus_tag="VHN20_11295"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEX2726397.1"
                     /translation="HVFGPASAFAYALGNVVRKHALATIPDSNLGTLISAIAGLIGFA
                     VSALFIERYRVAFLGVFRNATRWQVAAGVFASAGQLCQFAAIQHIEVSRAVMISSTEI
                     FFSMFLAVYVLKTERRPDGMTLVAALTAMAGVVLVAAG"
BASE COUNT          337 a          575 c          631 g          300 t
ORIGIN      
        1 atgttgcaca tggaataggc gcgcccgccc tcgacgcccg gcacatataa cagcgcgtat
       61 tggccaggca ggaacggcgc cggatctgca aggcggaatc ggaactcgcg gatatcgtgc
      121 gtgacgtcgt cgatggccaa caggcgcgcc tgcgtgcgaa ccggcttgtg cagactcttg
      181 taatggtcgc gcaggttcac cttgatgcgg caatcggaat gcgggcgggc ctggcagccg
      241 agatagcgct tgcgctgtcg gtcacgatcg ttccaggccg gtgcgtcgac gcggtcgtgg
      301 gcgacctcgc cttcgagcaa ctcgaaacgg caattgccgc acgagccgac attacactcg
      361 tagggaaagc ccagcccgtt gcgcagcgcg gcgcggagga tcgtgtcgtc attgcaatcg
      421 aatgcaatgt cggttccggt aagagtgatt tgagccatga cctgcgtgcg tgaaaagggt
      481 gaaagggtga agggctagaa cgtggcgccg gagcggtagc cgagccggac cgagatggct
      541 tcggcggttc tcaccacatg cggcgcgaac gaggcaagca ggtcgtccgg aagccgctgc
      601 accggccctg cgatgccgac cgcaccgacg acgtcgcgcg tggcgttcct gaccggcgcc
      661 gccacgcacc gcatgccggc ttcgctctcc tcgtcctcga ccgcataacc gcgctcccgc
      721 acggcggcaa gcacctcgcg caaccgccgg gggtcggtgt tggtcttggc cgtccgaggc
      781 tggagcccgc cggcgatgat ctcgtcgacg aggctgctcg gctggaaagc gagcatcgcc
      841 aggccttcgg cggtgcagta ggcgggcttg cgcacgccga tgtcggagcg catgcggatc
      901 gcctgcgtgc tctccaggtt gtagacgtac atgatgtccg tgcggtcgag gatggcgagg
      961 tggaccgtct cgccggtcgt ctcgcgcaag tcaaacaggt aaggcttggc ttcggtcgag
     1021 acgtccatgc ggcggcgcac gagcgccccg aggctgaaga gggttatgcc gagccggtat
     1081 ttgccgtttt ccgggttctg ctcgagcatg ccttccgaca ccagcgtggt ggcgagccgg
     1141 tgcaccgtgc tcttggccat cccgagacgc ttggcgagcg tgctgacccc gatatcgacc
     1201 tcgtcctcgg aaaacgcctt cagcaatgcg atcgcggccg cgaccgacga caggcgtttc
     1261 tccgaggatc gggcagcctc ctcgcctgca aggctcgcgt ccgagccggt gtcgctctgg
     1321 cggtccaagg ccaagtgttc cgctctgttg accaccgttc cgtttaggac cggagcgccg
     1381 atccagtcaa taaggggcgc aggaacggac gcgcctccct accctgccgc aacaaggacg
     1441 acaccggcca tagccgtcag ggcggcgacg agcgtcatcc cgtcgggccg acgttccgtc
     1501 ttgagaacgt aaacggcaag gaacatcgaa aagaagatct cggtcgagga gatcatcacg
     1561 gcgcgggaca cctcgatgtg ctggatggcc gcgaactggc acagctgccc ggccgacgcg
     1621 aacacgccgg ccgcaacctg ccagcgggtg gcattcctga acacgcccag aaaggccacc
     1681 cggtagcgct cgatgaacag ggccgagacg gcgaagccga tgaggccggc gatggcgctg
     1741 atcagggtgc cgagattgga atccggaatg gtggccagcg cgtgcttgcg cacgacgttg
     1801 ccgagcgcat aggcgaaagc cgaggctgga ccgaagacgt gat
//
LOCUS       DATAIQ010000681         2389 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_155052, whole genome shotgun sequence.
ACCESSION   DATAIQ010000681 DATAIQ010000000
VERSION     DATAIQ010000681.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2389)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2389)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2389
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_155052"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..654)
                     /locus_tag="VHN20_11300"
     CDS             complement(<1..654)
                     /locus_tag="VHN20_11300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX2726398.1"
                     /translation="MFGLARVGIRTRLYAGFAILVALGMIAAGLGWWSTTQVDVQTDK
                     MQALAGNMVRALKIGHDLEIIRRANVRYQTLANADALKEAIGAETRAAELLQEAAKAT
                     LSEERRKTYNAMHDGVGSLRGKREALVKLVDGITADKGKLFTSGDEVTATTNKMLEAA
                     RATGEQAIVNAARALEANVLLVRVANWRFLATKDASGPATFKTNHERALAAIAEVDKL
                     "
     gene            complement(875..1165)
                     /locus_tag="VHN20_11305"
     CDS             complement(875..1165)
                     /locus_tag="VHN20_11305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726399.1"
                     /translation="MRLVFILIVGIVMGLVFAGGGPSGALEALHTDSLAHWLPLGLRG
                     TAVVAFALTMSVLVLFALVSEGGFRKGEISTVVPSFFAFYAFFFGMTYWLFT"
     gene            1399..>2389
                     /locus_tag="VHN20_11310"
     CDS             1399..>2389
                     /locus_tag="VHN20_11310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase"
                     /protein_id="HEX2726400.1"
                     /translation="MLATEQRPGTTSDPAADKLRSLLDYVEQVVRLDERPAFRLAEHR
                     LSTGQTLVLHQHELHALPGIRHDLIDEDGPIWLSVERLRRGEPPACPEAAREWLEVAP
                     DPDVAPRLREERIVTVSAREKDDFIARGRVGPDDCTPALAPEAAGQFDVRLRLAARPE
                     VRAAAEAYIADQWLPWAEAERPRRRSMAVYQKLFEIAQLADLVADQPFELVWGLGLTR
                     WKRDEVEVDLPLIERLVEIEIDEDAAGEIRIRPRAAPALANLRAYEELSADGVTLAAD
                     AAQRAIAAAGQDGVAPFVKESFEPALRACQSRLDAEGRYLPDHAALEPAAPPPP"
BASE COUNT          409 a          812 c          801 g          367 t
ORIGIN      
        1 gagcttgtcc acttcggcga tggcggccag cgccctttca tgattggtct tgaaggtcgc
       61 cgggccggac gcgtccttgg tggcgaggaa gcgccagttg gcgacgcgca ccaggagcac
      121 gttggcttcg agcgcacgcg ccgcattgac gatggcctgt tcgccggtgg cacgggccgc
      181 ctccagcatc ttgttggtgg tcgccgtcac ctcgtcgccc gacgtgaaca acttgccctt
      241 gtccgccgtg atgccatcga cgagcttgac cagggcctcg cgcttgccgc gcaggctccc
      301 gacgccatcg tgcatcgcgt tgtaggtctt gcgccgctcc tccgagagcg tcgccttggc
      361 ggcttcctgg agcaattccg ccgcgcgcgt ttccgcgccg atcgcctcct tcaacgcgtc
      421 ggcgttggct aaggtctggt agcgcacgtt ggcacgcctg atgatctcga gatcatggcc
      481 gatcttgagc gcccgaacca tgttgcccgc gagggcttgc atcttgtcgg tctgcacatc
      541 gacctgggtc gtgctccacc agcccaatcc ggcggcgatc attcccagcg cgacgagaat
      601 ggcaaagcct gcgtagagac gcgtcctgat accgacccga gccaagccga acatgtgacc
      661 tccggaacga aatcgtgatg aattcgagcg ccggcatgct tgtgcttgga aggtttaaat
      721 ttgctcaacc gcggcggcgg cggtcgcacg ccccatcaga gaatgagcga tattgatccg
      781 tctgtgacgg aattgctgca gtgcgggatc gggcttccat tcacccggaa gaaacgcggc
      841 atgtggaacc ggtcgaagcg gatgtgatcc gccctcaggt gaacagccag taggtcatcc
      901 caaagaagaa cgcatagaag gcgaagaagg acggcaccac cgtcgagatc tcgcccttgc
      961 ggaacccgcc ctcggacacg agcgcgaaca gcaccagcac ggacatcgtc agggcgaagg
     1021 cgacgaccgc cgtgccgcgc agcccgagcg ggagccaatg cgccaggctg tccgtgtgca
     1081 gcgcctcgag cgcgccggac ggaccaccgc ccgcgaagac cagccccatg acgatgccga
     1141 cgatcagaat gaacacgaga cgcatggcgg cggctccccc ggaagctcgg ctgcgaatgc
     1201 ctggagcgga agcggacata aaagagcctg cttgatcggg atgaaaaaac cgttgcagcc
     1261 ggcaccgtga cacggccacc acagtcacgg gctccgcgcc gatcgcatcc gcgcgtcgac
     1321 gcaaaagccc gcttgaccgc gaagtggcca acgtcgagtg tccggcgatc atcagggtcc
     1381 aaagcggcgg gatacccttt gcttgcgacg gaacagcgtc ccgggaccac ctccgacccg
     1441 gcggcggaca agcttcgtag tctgttggat tacgtcgagc aggtggtgcg cctcgacgaa
     1501 cgcccggcgt ttcgtcttgc ggagcaccgg ctttcgacgg gccagacgct cgtgctgcat
     1561 cagcacgagc tgcatgccct gcccggaatc aggcacgacc tgatcgacga ggacgggccg
     1621 atctggctgt cggtggagag gctgcggcgc ggcgagcctc ccgcctgccc cgaagccgcc
     1681 agggagtggc tcgaggtcgc acccgatccg gacgtcgccc cgcgcctgcg cgaggagcga
     1741 atcgtcacgg tttcggcgcg ggagaaggac gatttcatcg cccggggccg ggtgggcccc
     1801 gacgactgca ctccggccct cgcccccgag gccgccggac aattcgacgt gcggctgcgc
     1861 ctcgccgccc ggcccgaggt gcgcgcggcg gccgaagctt atatcgccga ccagtggctg
     1921 ccctgggccg aggcggagcg gccgcgccgg cggtccatgg ccgtctatca aaagctgttc
     1981 gagatcgccc aactggccga cctcgtggcg gaccagccct tcgagctggt ctggggcctc
     2041 ggcctgacgc gctggaagag ggacgaggtc gaggtcgacc tgcccctgat cgagcggctc
     2101 gtggagatcg agatcgacga ggatgccgcc ggagaaatcc gcatccggcc gcgggccgcg
     2161 ccggctctcg ccaacctgcg cgcctacgag gaactgagcg ccgacggcgt gacgctggcg
     2221 gccgatgcgg cgcagcgggc gatcgccgcc gccggccagg acggcgtcgc gccgttcgtc
     2281 aaggagagct tcgagcctgc cttgcgggca tgccagtcgc gcctcgacgc cgaggggcgc
     2341 tatctgccgg accacgccgc cctcgagccc gccgcgccgc cgcctccgc
//
LOCUS       DATAIQ010000682         3388 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_405175, whole genome shotgun sequence.
ACCESSION   DATAIQ010000682 DATAIQ010000000
VERSION     DATAIQ010000682.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3388)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3388)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3388
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_405175"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..401
                     /locus_tag="VHN20_11315"
     CDS             <1..401
                     /locus_tag="VHN20_11315"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX2726401.1"
                     /translation="DLIMRMLSNCRFRLDVDHSDSGTHALGLARDTRYDVALVDSQFS
                     NGISGFEIACQIRAASPNTKLILMAGGAAGTAMQVARQFGLRSFLQKPFYLRDVEFAL
                     HAEFGLRRPYLLNALCAPQAPSRAAVAAHS"
     gene            415..1272
                     /locus_tag="VHN20_11320"
     CDS             415..1272
                     /locus_tag="VHN20_11320"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX2726402.1"
                     /translation="MKIVQKRDSAEPVAAPGPGILVADDSPVTRRVMCGHLASIVPGA
                     KVIEAATGHEACAALKTGGAEIAFIDMDLPDMNGVQAIALAREEGARPFVTLMATQIG
                     AGWEASCREIEAYEILEKPLEEGEIRQILLNYKRMKDRCRVLVADDSKTFRQLIRKVI
                     TASRFLTDIDVVDNGEGAISLLGQQSYDVIFLDYEMPGLDGLETACLVQEVSPGTRVV
                     MVSANHNDGVEKAARYFGVVDFLKKPFYPAEIDKALHLAFDLPLSSLLARLEAKVPGA
                     PTVPNAATA"
     gene            complement(1394..2794)
                     /gene="lpdA"
                     /locus_tag="VHN20_11325"
     CDS             complement(1394..2794)
                     /gene="lpdA"
                     /locus_tag="VHN20_11325"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012453494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004148 - dihydrolipoyl dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA];
                     GO_process: GO:0051068 - dihydrolipoamide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HEX2726403.1"
                     /translation="MSYDLVVIGTGPGGYVCAIRAAQLGMKVAVVEKRKTHGGTCLNV
                     GCIPSKALLHASELFEEAGKHFGDLGIGVGKPKLDLKKMMAFKDEGVDGNVKGVEFLL
                     KKNKVETFHGTARIPAAGQVEVRGEDGSNQVLQTRNIVIATGSDVARLPGIDIDEKVV
                     VSSTGALELGAVPKKLVVVGAGVIGLELGSVWRRLGAEVLVVEFLDRILPGMDNEVAR
                     QFQRILERQGIGFRLSSKVTKVDRASKTTKVAIEPAAGGAAETIEADVVLVAIGRVPY
                     TDGLGLEQVGVQRDNKGRILTDDHFATNVTGIYAIGDVIAGPMLAHKAEDEGVAVAEI
                     LAGKAGHVNYDVIPNVIYTFPEVASVGKTEEELKAAGVAYNTGKFPFTANGRAKVNRT
                     TDGCVKILADATTDRLLGVHIVGPDAGNLIAELAVAMEFGASSEDVARTCHAHPTLTE
                     AVKEAALAVEKRAIHM"
     gene            complement(2958..>3388)
                     /locus_tag="VHN20_11330"
     CDS             complement(2958..>3388)
                     /locus_tag="VHN20_11330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013500288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="2-oxo acid dehydrogenase subunit E2"
                     /protein_id="HEX2726404.1"
                     /translation="KHYVHMGVAVASDQGLVVPVVKDADTKGLLQISRDIVDVAKRAR
                     EGKLTMEDLTGGTFTITNGGVFGSLMSTPILNAPQSGILGMHRIEDRPVARGGQVVVR
                     PMMYLALSYDHRIVDGREAVTFLVRVKEALEDPARLVLDL"
BASE COUNT          553 a         1140 c         1121 g          574 t
ORIGIN      
        1 acgatctgat catgcgcatg ctctccaatt gccgcttccg gctggacgtc gatcattccg
       61 acagcggcac gcatgcgctc gggctggcgc gcgacacgcg ctacgacgtg gccctggtcg
      121 attcccagtt ctcgaacggc atcagcgggt tcgagatcgc ctgtcagatc cgcgccgcct
      181 cgccgaacac gaagctgatc ctgatggcgg gcggagcggc gggcaccgcc atgcaggtgg
      241 cgcggcaatt cggcctgcgc tcgttcctgc aaaagccgtt ctatctgcgc gacgtggaat
      301 ttgcgctgca tgccgagttc ggcctgcgcc gcccgtatct gctcaacgcg ctgtgcgccc
      361 cgcaagcgcc gtcgcgcgcc gccgtggcgg cccactcctg acgatcgccg gctgatgaag
      421 atcgttcaaa aacgcgacag cgcagagccg gttgcggcgc ccgggccggg catcctggtc
      481 gccgacgatt caccggtgac ccgccgggtg atgtgcgggc acctcgccag catcgtccct
      541 ggagccaagg tcatcgaggc ggcgaccggg cacgaggcct gcgcggccct gaagaccggc
      601 ggcgccgaga tcgccttcat cgacatggac ctgccggaca tgaacggcgt gcaggccatc
      661 gcgcttgcgc gcgaggaagg cgcgcgcccc ttcgtgacgc tgatggcgac gcagatcggc
      721 gccgggtggg aggcctcgtg ccgcgagatc gaggcctatg aaatcctcga gaagccgctc
      781 gaggaaggcg agatccgcca gatccttctg aactacaagc gcatgaagga tcgctgccgg
      841 gtgctggtgg cggacgactc gaagacgttc cggcagctga tccgcaaggt gatcacggcg
      901 agccgcttcc tcaccgatat cgacgtggtc gacaacggcg aaggcgccat cagcctgctc
      961 gggcagcaga gctacgacgt catcttcctc gattacgaga tgccgggcct ggacggtctc
     1021 gagacggcat gcctcgtgca ggaggtgtcg cccgggacac gcgtggtcat ggtttcggcc
     1081 aaccacaacg acggcgtcga gaaagccgcg cgctatttcg gcgtcgtcga cttcctcaag
     1141 aagccgttct accccgcgga aatcgacaag gccctgcacc tcgccttcga cctgccgctg
     1201 tcctcgctgc tggcgaggct cgaggcgaag gtgcccggcg cgccgacggt gcccaacgcc
     1261 gccacagcgt gaccggctcc cgcctcacgc ggcgcgatcg aatataagcg tgacgcaggc
     1321 ctgatccgat caagccgttc gaagggaacc gaagcaggaa ggcatcgcgg cgcgcggcag
     1381 gccgcatggc cgctcacatg tgaatggcgc gcttctcgac ggcgagcgct gcttccttga
     1441 cggcctcggt gagcgtcgga tgcgcgtgac aggtgcgcgc gacatcctcg gacgaggcgc
     1501 cgaactccat ggcgaccgcg agctcggcga tgaggttgcc ggcatcggga cccacgatat
     1561 gcacgccgag caggcgatcg gtggtggcgt cggcgaggat cttcacgcag ccgtcggtcg
     1621 tgcggttgac cttggcgcgg ccgttggccg tgaacgggaa cttgccggtg ttgtaggcaa
     1681 cgcccgccgc cttcagctcc tcctccgtct tgccgaccga ggcgacctcc gggaacgtat
     1741 agatcacgtt cgggatcacg tcgtaattca cgtggccggc cttgccggcg aggatctcgg
     1801 ccacggcgac gccctcgtct tcggccttgt gcgccagcat cggcccggcg atcacgtcgc
     1861 cgatcgcgta gatgccggtg acgttggtgg cgaagtggtc gtcggtgagg atccgaccct
     1921 tgttgtcccg ctgcacgccg acctgctcga gcccgaggcc gtccgtataa ggaacgcggc
     1981 cgatggcgac gagcacgaca tcggcttcga tcgtctcggc agcgccgccg gcggccggct
     2041 cgatggcgac cttggtcgtc ttgctggcgc ggtccacctt ggtgaccttt gacgacaggc
     2101 ggaaaccgat cccctggcgt tcgaggatgc gctggaactg tcgtgccacc tcgttgtcca
     2161 tgcccggcag gatgcggtcg aggaactcga cgaccagcac ctccgcgccg agacggcgcc
     2221 acacggagcc gagctcgagc ccgatcacgc cggcgccgac gacgacgagc ttcttcggca
     2281 cggcccctag ctcgagcgcc ccggtcgacg acaccacgac cttctcgtcg atgtcgatgc
     2341 ccggcaggcg cgccacgtcc gagccggtgg cgatgacgat gttgcgggtc tgcaggacct
     2401 ggttcgaccc gtcctcgcct ctgacctcca cctgaccggc ggccgggatt cttgccgtcc
     2461 cgtggaacgt ctcgaccttg ttcttcttga gcaggaactc gacgcccttg acgttgccgt
     2521 ccacgccctc gtccttgaat gccatcatct tcttcaggtc gagcttgggc ttgccgacgc
     2581 cgatgccgag atcgccgaaa tgcttgccgg cctcctcgaa cagctcggag gcgtgcagca
     2641 gggctttcga ggggatgcag ccgacgttga ggcaggtgcc gccatgcgtc ttgcgcttct
     2701 cgacgacggc gaccttcatg ccgagctgcg ccgcccgtat cgcgcagacg tagccgccgg
     2761 ggccggttcc gatgacgacg agatcgtagg acatggtcaa ccttcattgt catcgccggg
     2821 cgatgcgccg gcgatccaag gggttctaac gtcggaaatg gaaggccggg tcaagcccgg
     2881 ccgtagcaaa ctcggtgagc gtcgcttggc aatccagcgg actgagcgtc gctcaacatc
     2941 cgaaccctga gcgcagatca cagatccagc acaagccggg ccgggtcctc caaagcttcc
     3001 ttgacgcgca ccaggaaggt cacggcctcg cggccgtcga cgatgcggtg gtcgtaggag
     3061 agcgccagat acatcatcgg gcgcacgacg acctggccgc cccgcgccac cggccggtcc
     3121 tcgatgcggt gcatgccgag gatgcccgat tgcggcgcgt tgaggatcgg cgtcgacatc
     3181 agcgagccga agacgccccc gttcgtgatg gtgaacgtgc cgccggtgag gtcttccatc
     3241 gtcagcttgc cctcgcgcgc gcgcttcgcg acgtcgacga tgtcgcgcga gatctggagc
     3301 agtcccttcg tatcggcgtc cttgaccacg gggacgacga gtccctgatc cgacgccacc
     3361 gcgacgccca tgtgtacgta gtgcttgt
//
LOCUS       DATAIQ010000683         2102 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_128611, whole genome shotgun sequence.
ACCESSION   DATAIQ010000683 DATAIQ010000000
VERSION     DATAIQ010000683.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2102)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2102)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2102
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_128611"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..669
                     /locus_tag="VHN20_11335"
     CDS             <1..669
                     /locus_tag="VHN20_11335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HEX2726405.1"
                     /translation="ELSVILRWAFDYLQKHGDGEGPAGDVQEKSWLRDETGGSVYLRL
                     STRFVEQPQREITPDLRRDIIDGAYWMRKPGPNAQVVVAYAGAVAPEAIEAVGLMAED
                     RRDVGLLAVTSADRLNAGWTAAQRARERGLVHARSHVERLLADVPSHCGLVTVLDGHP
                     AALAWLGSVMGHRTRPLGVEHFGQTGTIQDLYRHYGIDAQGIIAAAEMIAPGRPIRHL
                     HALG"
     gene            complement(885..2054)
                     /gene="tgt"
                     /locus_tag="VHN20_11340"
     CDS             complement(885..2054)
                     /gene="tgt"
                     /locus_tag="VHN20_11340"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008479 - tRNA-guanosine(34) queuine
                     transglycosylase activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HEX2726406.1"
                     /translation="MTDTFTFTVAKTDGVARTGEIRMARGVIRTPAFMPVGTAATVKA
                     MYPDQVKALGADVVLGNTYHLMLRPGAERVARLGGLHAFMNWPYPILTDSGGFQVMSL
                     AQLRKIDETGVTFQSHIDGSTHVLTPERSIEIQGLLGSDIQMQLDECVRLPAPEDVTE
                     KAMQLSLRWAERCRVAFGDQPGKAMFGIVQGGTVARLRIESARALVGMDLKGYAIGGL
                     AVGEPQALMLGTIEVVEPHLPANKPRYLMGVGTPDDLIESVRRGIDMFDCVLPTRAGR
                     HGTAYTRYGRINLRNARYADDPEPIDAASKCAASNTYSKAYLHHLVRSNEILGMMLLT
                     WNNLAYYQDLMAGLRKAIAEGKLADFIAETRDGWSKGERDGQADEHEAIPASHAD"
BASE COUNT          302 a          714 c          743 g          343 t
ORIGIN      
        1 gagctgtccg tgatcctgcg ctgggcgttc gactaccttc agaagcacgg cgacggcgag
       61 ggcccggccg gcgacgttca ggagaagtcg tggttgcgcg acgagaccgg cggctcggtt
      121 tacctgcgcc tctcgacccg cttcgtcgag cagccgcagc gcgagatcac gccggatttg
      181 cgccgggaca tcatcgacgg cgcctactgg atgcggaaac ccggaccgaa tgcgcaggtg
      241 gtcgtcgcct atgcgggcgc ggtggcgccg gaagcgatcg aggcggttgg gctgatggcc
      301 gaggatcggc gcgacgtcgg gctgctcgcg gtcacgtccg cggaccggct caatgccggc
      361 tggacggcgg cgcagcgggc gcgcgagcgc ggcctcgtgc acgcgcgcag ccatgtcgaa
      421 cggctgctgg ccgacgtgcc gtcgcattgc gggctcgtca cggtgctcga cggccatccg
      481 gcggccctcg cctggctcgg ctcggtgatg ggccaccgca cgcgcccgct cggcgtcgag
      541 catttcgggc agaccggcac gatccaggac ctctaccgcc attacggcat cgacgcgcag
      601 ggcatcatcg ccgccgccga gatgatcgcc cccggccgcc cgatccggca tctgcatgcg
      661 ctggggtgag gcgatccctc cccgcaccca agtcgactgt tgtcgacttg ggcacctttg
      721 tgcggatctc gggcatgccc gagatccgtg gagggcggac tcgggtgcgc aagcacccga
      781 gccgggtggg atggcggcgc gacattagga gtcgtgctgc cgccccaccc cggtcgctac
      841 gcgactcggc cctcccctcg cggggccctc gcggggaggg atgactaatc cgcgtgcgag
      901 gcggggatcg cctcgtgctc atccgcctgc ccgtcgcgct cgcccttgct ccagccgtcg
      961 cgcgtctcgg cgatgaagtc ggcgagcttg ccctcggcga tggccttgcg caggccggcc
     1021 atcaggtcct ggtaatacgc caggttgttc caggtcagca gcatcatccc gaggatctcg
     1081 ttggaacgga cgaggtggtg cagataggcc ttcgaatagg tattcgacgc cgcacatttc
     1141 gatgccgcat cgatcggctc tgggtcgtcg gcgtacctgg cgttgcgcag gttgatgcgc
     1201 ccgtagcgcg tgtaggcggt gccgtgacgg ccggcgcgcg tcggcagcac gcaatcgaac
     1261 atgtcgatgc cgcgccgcac cgactcgatc aggtcgtccg gcgtgccgac gcccatcagg
     1321 tagcgcggct tgttggccgg caggtgcggt tcgacgacct cgatcgtgcc gagcatcagc
     1381 gcctgcggct cgccgaccgc gaggccgccg atggcgtagc ccttgaggtc catgccgacg
     1441 agggccctgg cgctctcgat gcgcagacgc gccaccgtgc cgccctgcac gatcccgaac
     1501 atcgccttgc cgggctggtc gccgaaggcg acgcggcaac gctccgccca gcgcagcgac
     1561 agctgcatgg ccttctcggt gacgtcctct ggcgccggca ggcgcacgca ttcgtcgagc
     1621 tgcatctgga tgtcggagcc gagcaggccc tggatctcga tcgagcgctc aggcgtgagc
     1681 acgtgcgtcg agccgtcgat atgcgactgg aaggtgacgc cggtctcgtc gatcttgcgc
     1741 agctgcgcga gcgacatgac ctggaagccc ccggaatcgg tgaggatcgg atacggccag
     1801 ttcatgaagg catgcagccc gccgaggcgc gcgacgcgtt ccgcgcccgg gcgcagcatc
     1861 agatggtagg tgttgccgag cacgacgtcc gcgccgagcg ccttgacctg atccggatac
     1921 atggccttga cggttgcggc cgtgccgacc ggcatgaagg ccggcgtgcg gatcacgccg
     1981 cgcgccatgc ggatctcgcc ggtgcgcgcc acgccgtccg tcttcgcgac cgtgaacgtg
     2041 aaggtgtcgg tcatgtaggg aatccaacct tcccaaacgt gtcatgcccg gccttgtgcc
     2101 gg
//
LOCUS       DATAIQ010000684         2778 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_128677, whole genome shotgun sequence.
ACCESSION   DATAIQ010000684 DATAIQ010000000
VERSION     DATAIQ010000684.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2778)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2778)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2778
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_128677"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(430..828)
                     /locus_tag="VHN20_11345"
     CDS             complement(430..828)
                     /locus_tag="VHN20_11345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011925341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX2726407.1"
                     /translation="MTISSQAALAGRRVLVVEDEYFVADDIARALHQLGADVVGPFAS
                     RDEALACFFSDDDVDIAVLDINVRGEMIYPLAEALRERGVPFVFATGYAEASLPSTYR
                     NIPRWEKPFDPKALADVLPGLPPPRDDRTG"
     gene            968..1702
                     /locus_tag="VHN20_11350"
     CDS             968..1702
                     /locus_tag="VHN20_11350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004446461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEX2726408.1"
                     /translation="MAAYLIRKLEQFTALSDEDKRALETLATYKTRHVGAREDVIREG
                     DKPRHVNLMLDGYACRYKTIEDGRRQIVAFFIPGDICDARMFMLKQMDHSIGTLSPAR
                     LAEIPGEVFLELVENSPTLMRALWWNTLVEEAIAREWTLNVGQRSAYERMAHLLCELF
                     VRLKAIGLTSGESCELPMTQAELADALGLSTVHVNRTLQELRANGLITLRGKTLVIHD
                     LEALQEAGLFNPAYLHYERTVEVTTA"
     gene            1764..>2778
                     /locus_tag="VHN20_11355"
     CDS             1764..>2778
                     /locus_tag="VHN20_11355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010683891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0008984 - protein-glutamate methylesterase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheB"
                     /protein_id="HEX2726409.1"
                     /translation="MANRDIIVIGGSSGATGPLKAILGAFPADLPAAVFVVLHIPTRS
                     IGLLSTVASAAGPLPARQAEDGMPIERGNVYIAAPDHHLILSDGRIRLGRGPRENMVR
                     PAIDPLFRSAAMTYGPRVIGVVLSGLLSDGASGLSAIKRCGGMALVQDPEDAIADEMP
                     RRALEATVADLCVSSAKLGDVLSDLARQPSGPAVLVPPEIRLEVDIAMGERIDSEVLK
                     SIADPTALTCPACGGVLSKMRTGNPLRFRCQVGHAYSADAVAKEQEGRVDEAVRVALR
                     IIEERAELVSRMAEDGLQSGRRAVAEMYHERANEYRRYADTLRSAVLRSFEQADPGTE
                     PGED"
BASE COUNT          497 a          901 c          911 g          469 t
ORIGIN      
        1 aagagccgta acgccaccct cgatccgctg ccgggagaag cgcttcagga acaggtggcg
       61 gcggccatgg cgacgccgaa atccgtggtc gagcgcacgc gcgccatcgt gagcgcgaaa
      121 tagcttcttc cccctccccg cgcggggagg ggagaattcc taaagtctct ccaggaagca
      181 ggaaccgcgc ggtcaagctc gcgccggggt cgccttcctg cccatctcgt cctcgggctg
      241 atcgaactcg gcacgagcct gatgaccgag acgcgctcga gcgccggcga aggtgcggcg
      301 ctccgggtgt aacgctatcc ggccgcggac ggggccgcat ctgaaacgca ggtcgggtct
      361 gactgatccg acttgcacaa ccgggagcat gatccggcgg cgtggtttcc actccgccgg
      421 aatcaagctc tagccggttc tgtcatcgcg gggtggaggt aagcccggaa gcacgtcggc
      481 gagggctttc ggatcgaacg gcttctccca gcgtgggatg tttcggtagg tggagggaag
      541 ggatgcctcg gcgtagccgg tcgcgaatac aaacggcacg ccgcgttcgc gcaatgcctc
      601 ggccagcggg tagatcatct cgccgcgcac attgatgtcg agcacggcta tgtcgacgtc
      661 atcgtcggag aagaagcatg cgagggcctc gtcgcggctt gcgaacggcc cgaccacgtc
      721 ggcgccgagc tgatgcaagg cgcgcgcgat gtcatcggcg acgaaatatt cgtcttcaac
      781 cacaaggacg cgccgacccg cgagggcagc ctgggaggaa atggtcacgg acagccgtcc
      841 cacgattact tggcgtcgac gatacaacaa gactccgatc gccaaaatga cataagctaa
      901 ttgcgacggg gggcagagcg agtacaaatc atacgccgct tttgcgtact tggcgaggag
      961 ggggcacttg gccgcctatc tcatccgcaa gctcgaacaa ttcaccgcat tgtcggacga
     1021 ggacaagcgg gcgctggaaa ccctcgccac ctacaagacc cgccatgtcg gtgcgcgcga
     1081 agatgtgatc cgcgagggcg acaagccccg gcacgtcaac ctgatgctgg acggctatgc
     1141 ctgccgctac aagacgatcg aggacgggcg ccgtcagatc gtcgcgttct tcattccggg
     1201 ggacatctgc gatgcccgca tgttcatgct caagcagatg gaccactcga ttggcacatt
     1261 gtcgcctgca cggcttgccg agatccccgg agaggtgttt ctcgagcttg tcgagaattc
     1321 accgactctc atgcgcgcct tgtggtggaa cacgctcgtc gaggaagcga ttgcccggga
     1381 atggactctc aatgtcggtc agcgcagcgc ttacgagcgc atggcgcact tgctctgtga
     1441 gttgttcgtc cgcctgaagg ccatcgggct gaccagcggc gagagctgcg agctgccgat
     1501 gacgcaggcc gagctcgccg acgcgcttgg cctatcgacc gtgcacgtca accgcaccct
     1561 gcaggagctt cgtgccaacg gcctgatcac gttgcgcggc aagacgctcg tgattcacga
     1621 cctggaggct ctccaggaag cggggctgtt caaccccgca tacctgcact acgagcgcac
     1681 cgtggaggtc acgaccgcct gacacttcgg aaccgcattg ccgcatgatc attgactcga
     1741 catcttgagg ggccccaagg gccatggcca accgcgacat catcgtcatc ggcggctcga
     1801 gcggagcaac cggcccgctc aaggcgatcc tcggcgcctt ccctgccgac cttccggctg
     1861 cggtgttcgt cgtgctgcat atccccaccc gcagcatcgg cctgctgtct acggtggcga
     1921 gcgcggccgg accgctgccc gcccggcagg cggaagacgg catgccgatc gagcgcggca
     1981 acgtctatat cgcggctccg gatcaccacc tgatcctgtc cgacggccgc atacggctcg
     2041 gtcgcggccc gcgtgagaac atggtgcgtc cggccatcga cccgttgttc cgttcggcgg
     2101 ccatgaccta cgggccgcgc gtcatcggcg tcgtcctgag cggcttgctg agcgacggcg
     2161 cctcaggcct aagcgccatc aagcgctgtg gaggcatggc gctcgtccag gatcctgaag
     2221 acgccattgc cgacgagatg ccgcgccgcg ccctggaagc cacggttgcg gacctttgcg
     2281 tgtcgagcgc caagctcggc gacgtgctct ctgaccttgc ccgccaacct tctggcccgg
     2341 ctgttctggt cccgcccgag atccgcctcg aggtcgacat cgccatgggc gagcgtatcg
     2401 attcagaggt gctgaagtcg attgccgacc cgacggccct gacctgcccg gcctgcggcg
     2461 gtgtcctgtc gaagatgcgg acgggcaatc cgctccggtt ccgctgccag gttggtcacg
     2521 cttacagcgc cgacgcggtc gcgaaggagc aggaggggcg tgtcgacgag gcggtgcgcg
     2581 tggcgctgcg catcatcgag gaacgggcag agctggtctc tcgcatggcc gaggacggcc
     2641 tccagagcgg gcgcagggcg gtcgccgaga tgtatcacga gcgcgccaac gaataccgtc
     2701 gttatgccga tacgctgcgc agcgcggtgc tccgctcctt cgagcaggcg gacccgggca
     2761 ccgagcctgg tgaggact
//
LOCUS       DATAIQ010000685         3218 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_312930, whole genome shotgun sequence.
ACCESSION   DATAIQ010000685 DATAIQ010000000
VERSION     DATAIQ010000685.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3218)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3218)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3218
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_312930"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            4..1170
                     /locus_tag="VHN20_11360"
     CDS             4..1170
                     /locus_tag="VHN20_11360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015933531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX2726410.1"
                     /translation="MNIEAAPRPRHYVDTAPFDPGATEPVGADNEQFYRASSWRLMWW
                     KFRRHKVAVASALILLVFYLMVPFVEIIAPYNQTRRHGDFLYAPPQPIHLMHKGSLVG
                     PFVYPYRFTFNLETFQRDYIVDRSAPQPLRFFCRGEDYEMWGLWKTNFHLVCPPEDGT
                     MFIAGTDRLGRDLFSRIIYGARISLTIGLVGIAVSFTLGLFFGGLAGYVGGWVDHVIQ
                     RMIEILRSLPELPLWLALSAALPPNWSPILVFFGITIILGLLDWPGLARAVRSKLLAL
                     REEDFVRAAELMGASKRRIIARHLIPNFMSHLIASATLSIPSMILGETALSFLGLGLR
                     PPVTSWGVLLNEAQNLAAVQLHPWLLFPIVPVVLVVLAFNFMGDGLRDAADPYH"
     gene            1367..2527
                     /locus_tag="VHN20_11365"
     CDS             1367..2527
                     /locus_tag="VHN20_11365"
                     /inference="COORDINATES: protein motif:HMM:NF015692.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-ribosylglycohydrolase family protein"
                     /protein_id="HEX2726411.1"
                     /translation="MTALFDKVFGSLAAANIGSAIGAAVEWVSVPGGGWKAVEDHFGW
                     VEEPIAWVQKDRDVRYWNNSPRLHYFHMDMEPGMTEDGAEIRYLLALAMIEKGGRVNV
                     DDVAAIWRREIKRSDIGRLVNPHIAIHFDRLTAGDDITRIPPRLIGSMTPWPGLVDAA
                     HMIGPVGIINACDPRQAAQDTEDVCLLLQPPASGGIEGSKAIAAATAEAFRPGATVDS
                     IIEASRAYVSVNTREIIDEVLDIARRYPNIRDFREPIRKHFMPTYPYADAVETAAEAI
                     GLFWITKGDVREGLVGATNLGRDTDCIGGMLGPICGADKGIAGVPREWVDLVQGAIDR
                     NTVTLQKLSMEETARRLTDAVRNNLQRLRQQVDELTELDGAAAGAQKRAAAR"
     gene            2569..>3218
                     /locus_tag="VHN20_11370"
     CDS             2569..>3218
                     /locus_tag="VHN20_11370"
                     /inference="COORDINATES: protein motif:HMM:NF037995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HEX2726412.1"
                     /translation="MRSLLRLLSLAAAVAVGVVAAGAPRASAQTMRLPHCCAADSHFD
                     QGAKKFAELLDKKTGGKLKVRVFPGGQLGQETEVLQNVQSGTIEFTMVGHDPLAQFAP
                     ITTILSQPYLFRDHDHAFQLLSGKLGQEIDAALREKGLRALAWGDNGARVYTNSTRAI
                     NVPGDLAGLKIRSPQSPVNLAVTKALGGIPIAIPYGEVYTAIQQKTIDGQENAVIN"
BASE COUNT          532 a         1160 c          991 g          535 t
ORIGIN      
        1 gccatgaata tcgaggccgc cccgcgtccc cgccactacg tcgataccgc gccgttcgac
       61 cccggcgcta ccgagcccgt cggcgccgac aacgagcagt tctatcgcgc ctcgtcgtgg
      121 cggctgatgt ggtggaagtt ccgccgccac aaggtcgccg tggcgtcggc gctgatcctg
      181 ctcgtcttct acctgatggt gccgttcgtc gagatcatcg cgccctacaa ccagacgcgg
      241 cgccacggcg attttctcta cgcgccgccg cagccgatcc atctcatgca caagggcagc
      301 ctggtcggcc cgttcgtcta tccgtaccgc ttcaccttca acctcgagac tttccagcgc
      361 gactacatcg tcgaccgctc ggcgccgcag ccgctgcgct ttttctgccg cggcgaagat
      421 tacgagatgt ggggcctttg gaagacgaac ttccatctcg tttgcccgcc ggaagacggc
      481 acgatgttca tcgccggcac cgaccggctc ggccgcgacc tgttctcgcg catcatctac
      541 ggcgcccgca tctcgctgac gatcggcctc gtcggcatcg ccgtgtcgtt cacgctcggg
      601 ctcttcttcg gcggcctcgc cggttatgtc ggcggctggg tcgaccacgt gatccagcgc
      661 atgatcgaga ttctgcgctc cctgcccgag ctgccgctgt ggctggcgct gtcggcggcc
      721 ctgccgccga actggagccc gatcctcgtt ttcttcggca tcaccatcat cctcgggctg
      781 ctcgactggc ccggcctcgc gcgcgcggtg cgctcaaagc tgctggcgct gcgcgaggag
      841 gatttcgtgc gtgccgcgga actcatgggt gcctccaagc ggcgcatcat cgcgcgccac
      901 ctgatcccga acttcatgag ccacctgatc gcctcggcga cgctgtcgat cccgtcgatg
      961 atcctcggcg agacggcgct gtcgttcctc ggcctcggcc tgcgcccgcc ggtcaccagc
     1021 tggggcgtgc ttctcaacga ggcgcagaat ctcgcggcag tgcagcttca cccgtggctg
     1081 ctgttcccga tcgtgccggt ggtgctcgtc gtgctcgcct tcaacttcat gggcgacggc
     1141 ctccgcgacg cggccgatcc gtatcactga cccaccccct cccggttacg ggagagggaa
     1201 gcggccgagc cctacaccca gaagaagtcg acctgcgcca aaccggacga catcccggac
     1261 gtcggcttcg gcgatgccgg cttgccgtcg cgcgtgaatg cggtgcagca gcttgacgtc
     1321 gctgctcaag tctgctgatc tggccgtggt cagaccagga tatctcatga cagccctttt
     1381 cgacaaggtt ttcggctcgc tcgcagccgc caatatcggc tcagcgatcg gcgcggccgt
     1441 ggaatgggtc agcgtgcccg gaggcggctg gaaagccgtc gaggaccatt tcggctgggt
     1501 cgaggagccg atcgcctggg tgcagaagga ccgcgacgtc cgttactgga acaacagccc
     1561 gcggctccac tacttccaca tggatatgga gcccggcatg acggaggacg gggcggagat
     1621 ccgctacctc ctggcgctcg ccatgatcga gaaaggcggc cgcgtgaacg tcgatgacgt
     1681 cgccgcgatc tggcggcgcg agatcaagcg ctccgacatc ggccggctcg tcaacccgca
     1741 catcgccatc catttcgacc ggctcaccgc cggcgacgac atcacccgca ttccgccgcg
     1801 cctgatcggc tccatgaccc cgtggcccgg cctcgtcgac gccgcccata tgatcggccc
     1861 ggtcggcatc atcaacgcct gcgacccgcg ccaggcggcg caggacaccg aagacgtctg
     1921 cctgctcctg cagccccccg ccagcggcgg catcgaggga tcgaaggcca tcgccgcggc
     1981 caccgccgaa gcgttccggc ccggcgccac cgtcgactcg atcatcgagg cctcgcgcgc
     2041 ctacgtgtcc gtgaacacgc gcgagatcat cgacgaggtg ctcgacatcg cccgtcgcta
     2101 tccgaacatc cgcgatttcc gcgagccgat ccgcaagcac ttcatgccga cctaccccta
     2161 tgccgacgcc gtcgagaccg ccgccgaggc gatcggtctc ttctggatca ccaagggcga
     2221 cgtacgcgaa gggctggtcg gcgcgaccaa tctcgggcgc gacaccgatt gcatcggcgg
     2281 catgctcggc ccgatctgcg gcgccgacaa gggcatcgcc ggcgtgccgc gcgaatgggt
     2341 cgacctcgtg cagggcgcga tcgaccgcaa caccgtgacg ttgcagaagc tgtcgatgga
     2401 agagaccgca cgccgcctca ccgacgccgt gcgcaacaat ctgcaacgcc tgcgtcagca
     2461 ggtcgacgag ctgaccgagc tcgacggcgc cgcggccggc gcccagaagc gcgccgccgc
     2521 acgctgacac ccttcgcgac cacatcaacc atcaccggga ggaaaattat gagatcactg
     2581 ttacgccttt tgagcctggc ggctgccgtt gccgtcggcg tcgtcgccgc cggagcgccg
     2641 cgtgcgtccg cccagaccat gcgcctgccg cattgctgcg cggccgacag ccacttcgac
     2701 cagggcgcca agaagtttgc cgagttgctg gacaagaaga ccggcggcaa gctgaaggtg
     2761 cgcgtcttcc cgggcggtca gctcggccag gagacggagg tcctccagaa cgtccagagc
     2821 ggaaccatcg agttcacgat ggtgggacac gatccgctcg cgcaattcgc gcccatcacc
     2881 accattctga gccagcccta cctgttccgt gatcacgacc acgccttcca gctcctctcc
     2941 ggaaagctcg ggcaggagat cgacgcggcg ctgcgcgaga agggcctgcg cgcccttgcg
     3001 tggggcgaca acggcgcgcg cgtctacacg aacagcacgc gtgcgatcaa cgtcccgggc
     3061 gatctggccg gcctgaaaat ccgcagcccg caaagccccg tgaacctcgc ggtcacgaag
     3121 gcgctcgggg gcattccgat cgccattccc tacggcgagg tctacacggc catccagcag
     3181 aagaccatcg acgggcagga gaacgccgtc atcaacat
//
LOCUS       DATAIQ010000686         2520 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_405387, whole genome shotgun sequence.
ACCESSION   DATAIQ010000686 DATAIQ010000000
VERSION     DATAIQ010000686.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2520)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2520)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2520
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_405387"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..230
                     /locus_tag="VHN20_11375"
     CDS             <1..230
                     /locus_tag="VHN20_11375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEX2726413.1"
                     /translation="KMPRTIALPPGVPQDAVTYWAGVFKKVTETPEWKGYLENTSQTG
                     RYMAGPELKTFIDEDEKRTRKMYEEEGWLVN"
     gene            291..785
                     /locus_tag="VHN20_11380"
     CDS             291..785
                     /locus_tag="VHN20_11380"
                     /inference="COORDINATES: protein motif:HMM:NF018979.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter TctB
                     family protein"
                     /protein_id="HEX2726414.1"
                     /translation="MSERALVSRSTMEVVTALATMAIGGAVMWGAVEHDIGWGDSGPA
                     AGYFPFRLGVLIVLGSLANLWLALRRRSDDTSVFLTREQGKRVLAFGLPIVGFVIVSL
                     WLGLYVAAILYLFLVMVFQGGYRPLFAIAVAVGFAVVMRLVFPMWFKVPLLTGPLEAM
                     LGLY"
     gene            795..2306
                     /locus_tag="VHN20_11385"
     CDS             795..2306
                     /locus_tag="VHN20_11385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020186474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HEX2726415.1"
                     /translation="MENIGSLLHGFTVALTFQHVLLMLVGVLLGILVGVLPGLGAPNG
                     VTLLMPLTYNMNPVSAIILLTSMYWGALFGGSTTSILFNIPGEPSSVATTFDGHPMAK
                     QGHAVEALSYAFLSAGFGALVGVLVITLLSSWVTSFALQFSSPEFFAVYFLAFASFIG
                     FGGTAPTKSLVSIMLGFAFATIGMDTISGSLRLTFGFDELLRGVSFLIVVIGLFGIGE
                     LLLTMEEGLKFEGIKAKVSLRGVLGTLARMPRYWAALLRGSMVGVWMGITPGGPTAAS
                     FMSYGLAKRFSRRRASFGRGEPEGVIAPETADHGAGTSAMLPMLALGIPGSATAAVMM
                     GGLMIWGLNPGPMLFIERPDFVWGLIASMYLGNVVAVVLVLTTVPLFAAILRIPFAII
                     GPMIVVVCFIGAWTVASSKPDLWLALIFGVIGYVFKKLDYPIAPLVLALVIGDKAEDA
                     FRQSMLMSQGSLWIFFSNPLVTTMMLLALALVIVPLVMQALSRRRQPRASAPV"
     gene            complement(2319..>2520)
                     /locus_tag="VHN20_11390"
     CDS             complement(2319..>2520)
                     /locus_tag="VHN20_11390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726416.1"
                     /translation="QQQKARVWELHAAGSLARFARARGQLVDADDALASVLATFSDDG
                     QLPALREARTLLDSAQPGLRSA"
BASE COUNT          347 a          819 c          857 g          497 t
ORIGIN      
        1 acaagatgcc gcgcacgatc gcgctgccgc cgggcgtgcc gcaggacgcg gtgacgtact
       61 gggcgggcgt gttcaagaag gtgaccgaga cgccggagtg gaagggctat ctcgagaaca
      121 cctcgcagac gggccgctac atggcaggcc ccgagctcaa gaccttcatc gacgaggacg
      181 agaagcgcac ccgcaagatg tatgaggaag aaggctggct cgtgaattga atgaacgggg
      241 cacggccgcc ctggccgtgc cctcccgttt cagctgcagc aggttttcag atgagtgaac
      301 gcgcgctggt ttcgcgctcg accatggagg tggtgacggc gctcgccacg atggcgatcg
      361 gcggggcggt gatgtggggc gccgtcgagc acgacatcgg ctggggggat tcggggcccg
      421 cggccgggta tttcccgttc cgtctcggcg tgctcatcgt gctcggcagc ctcgccaacc
      481 tctggctggc tttgcggcgg cgcagcgacg acacgtcggt gttcctgacg cgcgagcagg
      541 gcaagcgcgt cctcgccttc ggcctgccga tcgtcggctt cgtaatcgtg tcgctctggc
      601 tcgggctcta cgtggcagcg atcctgtatc tgttcctggt aatggtgttc cagggcggct
      661 atcgcccgct tttcgcgatc gctgtggcgg tcggcttcgc cgtggtgatg cgcctggtgt
      721 tcccgatgtg gttcaaagtg ccgctgctca cggggcccct ggaagcaatg ttgggactct
      781 actgaggaag cggcatggag aacatcggat cgctcctcca cggtttcacg gtcgcgctca
      841 ccttccagca cgtcctgctg atgctggtcg gcgtgctgct cggcatcctc gtcggcgtgc
      901 tgcccgggct tggcgcgccg aacggggtga cgctgctgat gccgctcacc tacaacatga
      961 acccggtctc ggcgatcatc ctgctgacca gcatgtattg gggcgcgctg ttcggcggct
     1021 cgacgacctc gatcctgttc aacatccccg gcgagccgtc gtcggtggcc accaccttcg
     1081 acggccatcc catggccaag caggggcacg ccgtcgaggc gctgtcctac gcgttcctgt
     1141 cggccggctt cggcgcgctg gtcggcgtgc tcgtcattac gcttctgtcg agctgggtga
     1201 cgagcttcgc gctgcagttc tcgtcgcccg aattcttcgc ggtctatttc ctggcgtttg
     1261 cgagcttcat cggcttcggc ggcacggcgc cgaccaagag cctcgtgtcg atcatgctgg
     1321 gcttcgcctt cgccaccatc ggcatggata cgatctcggg cagcctgcgc ctgaccttcg
     1381 gcttcgacga gctgctgcgc ggcgtcagct tcctgatcgt cgtgatcggc ctgttcggca
     1441 tcggcgagct cctcttgacc atggaggaag gcctcaagtt cgaagggatc aaggccaagg
     1501 tcagcctgcg cggcgtgctc gggaccttgg cccggatgcc gcgctactgg gcggcgctcc
     1561 tgcggggcag catggtcggc gtgtggatgg gcatcacgcc gggcgggccg acggccgcct
     1621 cgttcatgag ctacggcctg gccaagcgct tctcgcgccg tcgcgccagc ttcggacgcg
     1681 gcgagccgga gggtgtgatc gctccggaga ccgccgatca cggcgccggc acgagcgcca
     1741 tgctgcctat gctggcactc ggcattccgg gctcggccac ggccgcggtg atgatgggcg
     1801 gcctcatgat ctgggggctc aatccggggc caatgctgtt catcgagcgg ccggatttcg
     1861 tgtggggact gatcgcctcg atgtatctcg gcaacgtcgt cgccgtggtc ctcgtgctca
     1921 cgaccgtgcc gctgttcgcg gcgatcctgc gcattccctt cgccatcatc gggccgatga
     1981 tcgtcgtcgt ctgcttcatc ggcgcatgga ccgtcgcctc gtcgaagccg gatctgtggc
     2041 tcgccctgat cttcggggtc atcggctacg tgttcaagaa actggactat ccgattgccc
     2101 cgctggtgct cgcgctggtc atcggcgaca aggccgagga cgccttccgg caatcgatgc
     2161 tgatgtcgca gggcagcctg tggatcttct tctcgaaccc gctcgtcacc accatgatgc
     2221 tgctggcgct ggcgctggtc atcgtgccgc tcgtgatgca ggccttgtcg cgccggcggc
     2281 aaccgcgagc cagcgctccc gtgtaagatc ggccgccgtc aggcgcttct gagcccgggc
     2341 tgagcgctgt cgagcagcgt cctcgcctcg cgcaaagcag gcaactggcc atcgtcactg
     2401 aacgtggcca ggaccgacgc gagcgcatcg tcggcgtcga cgagctggcc gcgcgcgcgc
     2461 gcgaaacggg cgaggctgcc ggcggcatgg agctcccaga cccgggcctt ctgctgttgc
//
LOCUS       DATAIQ010000687         3290 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_451085, whole genome shotgun sequence.
ACCESSION   DATAIQ010000687 DATAIQ010000000
VERSION     DATAIQ010000687.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3290)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3290)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3290
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_451085"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            141..962
                     /locus_tag="VHN20_11395"
     CDS             141..962
                     /locus_tag="VHN20_11395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726417.1"
                     /translation="MSPAPKIFVATPTTNGIMLSQHVGAVVHMVTRLHAAGIGTQYAT
                     VDGPNLILQRDLLGHMFLQSDCTHLLWVDSDMSFEPGLCEKLLSFDKPLVGTIYTRRA
                     LDLGKLKSLVPAHGFDHALALAYNWNVRLLGPRLEVTNGLCKVEGIGFGFTLIARACF
                     DELAQGGACPLYESPLTGSQVRAFFRETTSEAGALLDLDYSFCKRWVDRGGEVLAYVG
                     ANVRHVGDFRYGVPFAAYLAALQAAKPEVPADAEGVSKRAAPSASTSRNGNGARH"
     gene            959..3178
                     /locus_tag="VHN20_11400"
     CDS             959..3178
                     /locus_tag="VHN20_11400"
                     /EC_number="4.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_function: GO:0016849 - phosphorus-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0032555 - purine ribonucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEX2726418.1"
                     /translation="MSRWRRLLKRFGLGRAICVVLLVDLVILRVWDPLPLEMLRLRTF
                     DLYQTLRPRESPLRPVTIVDIDEESLKSIGQWPWPRTIVADIVTRLTQLGAVAIGFDV
                     VFAEPDRASPGVAAEALRGLDEQTREKLRALPSNDQVLAEAIKRSRVVVGQSGYRLAS
                     QDTSKATRIQSGFAMLGGDPKPFLVPFPDLLRNVAPIEEAAAGGGLFSLRQERDGTIR
                     RIPLVMTAEGVMVPSLTLDLLRVVTGAGAILVRTDAAGIRSVAIPGLELPTDGNGRLW
                     IYFGERDPARYVSAKDVLQGRVAPDKVAGKLVLIGTSATGLQDIRTTPIDPVMPGVEI
                     HAQLLENILTNSMLRAPSHMTAAELTVAVLVSLAIIALAPIIGAGMLLVLGGGVAALI
                     AGISWYYFYHEHILFDVTFPFLASFSIYGMLVFTNYLRAHTERRQIRSAFSQYLSPAL
                     VEQLAQSPEKLVLGGEERVMTVLFSDVRGFTAISEMYKHDPQGLTALMNRLLTPMTNV
                     IIERKGTIDKYIGDAIMAFWNAPLDDPAQEANACNAALQMLRCVAEINRVREKEAEEA
                     GQPFVPVRIGVGLNTGPCVVGNMGSDLHFNYSVLGDMVNLASRLEGQTKTYGVPIVIG
                     ATTAQAVQGALAVLEIDFVQVKGKTEPELVYTLLGGPDVAETPRFQKLRDLNGLMLTA
                     YRNQNWAGALEAILQCREAGREFGLDEFYDRYVARIRTLLDQPPEADWNGVFVAETK"
BASE COUNT          532 a         1126 c         1077 g          555 t
ORIGIN      
        1 cagggcgatt tcgtcctttg atcgggcggc gtcgcgaggg gcgccggctg gttgtcaacg
       61 ctagtggggg tcaataacct tgccgccggc cggcagcccc gtgcgtgcgg ccctggtttg
      121 agaggcattg tgcagcgctc atgagcccgg cccccaagat cttcgtcgcc accccgacca
      181 cgaacggcat catgctgtcg cagcatgtcg gcgcggtggt gcatatggtg acgcgcctgc
      241 acgcggccgg catcggcacg caatacgcca cggtcgacgg accgaacctg atcctgcagc
      301 gcgatctcct ggggcacatg ttcctgcagt ccgactgcac gcatctcctg tgggtggaca
      361 gcgacatgag cttcgagccg gggctgtgcg aaaagctcct gtccttcgac aagccgctgg
      421 tcggcacgat ctacacgagg cgcgcgctcg atctcggcaa gctgaaaagc ctggtgccgg
      481 cgcatggctt cgaccacgcc ctggcgctcg cctataactg gaacgtgcgg ctgctcggcc
      541 cgcggctcga ggtgacgaac ggcctgtgca aggtcgaggg catcggcttc ggtttcacgc
      601 tgatcgcgcg cgcctgtttc gatgagctgg cccagggcgg cgcgtgcccg ctctacgaga
      661 gcccgctgac cggaagccag gtgcgtgcct tcttccgcga gacgacctcc gaggccggcg
      721 cgctgctcga cctcgactat tcgttctgca agcgctgggt cgatcgcggc ggcgaggtcc
      781 tggcctatgt cggggccaac gtgcgccatg tcggcgactt ccgctacggc gtgcccttcg
      841 ccgcctatct cgccgccttg caggcggcga agccggaggt gccggccgac gccgagggcg
      901 tctcgaagcg agctgccccg tcggcgtcca cgtcccgcaa cggcaacggg gcgcgccatt
      961 gagccgctgg cgccgtctcc tcaagcgttt cggcctcgga cgcgccatct gcgtggtgct
     1021 gctcgtcgac ctcgtcatcc tgcgcgtctg ggacccgctg ccgctcgaga tgctgcgcct
     1081 gcgcaccttc gacctctacc agacgctcag gccgcgcgag tcgcccctgc gcccggttac
     1141 catcgtcgac atcgacgagg agagcctcaa gtcgatcggt cagtggccgt ggccgaggac
     1201 catcgtcgcg gacatcgtca cgcggctgac gcagctcggt gccgttgcga tcggtttcga
     1261 cgtggtgttc gccgagcccg accgggcctc gcccggcgtc gcggcagagg cgttgcgcgg
     1321 cctcgacgag cagacccgtg aaaagctgcg agctctgccg agcaacgacc aggtgctggc
     1381 cgaagccatc aagcgctcgc gcgtggtggt cgggcagtcg gggtatcgcc tggcctcgca
     1441 ggacacgagc aaggccaccc gaatccagtc aggctttgcg atgctgggcg gcgatccgaa
     1501 gcctttcctc gtccctttcc ccgacctcct gcgcaacgtg gcgccgatcg aggaagctgc
     1561 cgcgggcggc ggcctctttt cgctcaggca ggaacgggac ggcaccatac gccgtattcc
     1621 gctcgtcatg acggccgaag gggtcatggt gccatcgctg acgctggacc tgctgcgcgt
     1681 cgtcacgggc gctggcgcga tcctcgtgag gaccgacgcc gccggcatcc gcagcgtcgc
     1741 gatccccggc ctcgagttgc cgaccgacgg caacggccgg ctctggatct atttcgggga
     1801 gcgcgacccc gcgcgctacg tgtcggcgaa agacgtgctg caaggacggg tcgcaccgga
     1861 caaggtcgcc ggcaagctgg tcctcattgg aacgtcggca acgggtctgc aagacatcag
     1921 gaccacaccg atcgatccgg tcatgcccgg cgtcgaaatc cacgcgcagc tgctggagaa
     1981 catcctgacg aattccatgt tgcgggcgcc gagccacatg acggcggcgg agctcaccgt
     2041 cgccgtcctc gtgagcctgg ccatcatcgc gctcgcgccc atcatcggcg ccggcatgct
     2101 gctggtcctc ggcggcggcg tcgcagcgct gatcgccggc atctcgtggt actatttcta
     2161 ccacgagcac atcctgttcg acgtgacgtt cccgttcctc gccagcttct cgatctacgg
     2221 gatgctggtg ttcaccaatt acctgcgcgc gcatacggag cgccgccaga tccgctcggc
     2281 gttcagccag tatctctcgc cggcgctggt cgagcagctc gcccagtcgc cggaaaagct
     2341 cgtgctcggc ggcgaggaac gggtgatgac cgtgctgttc agcgacgtgc gcggcttcac
     2401 cgccatttcg gagatgtaca agcacgatcc gcaaggcctg acggcgctga tgaaccgcct
     2461 gctcacgccc atgaccaacg tcatcatcga gcgcaagggc acgatcgaca agtatatcgg
     2521 cgacgccatc atggctttct ggaacgcgcc gctggacgat ccggcgcagg aggccaatgc
     2581 ctgcaacgcc gccctgcaga tgctcagatg cgtcgccgag atcaaccggg tgcgcgagaa
     2641 ggaggcggaa gaggccggcc agccattcgt gccggtgcgc atcggggtcg gcctcaacac
     2701 cgggccgtgc gtggtcggca acatgggctc ggacctgcac ttcaactact cggtgctcgg
     2761 cgacatggtg aacctcgcct cgcgcctcga aggccagacc aagacctacg gcgtcccgat
     2821 cgtcatcggg gcaacgaccg cacaggccgt gcagggcgcc ctggcggtcc tcgaaatcga
     2881 tttcgttcag gtgaagggaa agaccgagcc ggagctcgtc tacacgctgc tcggcgggcc
     2941 ggacgtcgcc gagacgccgc gcttccagaa gctgcgcgac ctcaacgggc tgatgctcac
     3001 ggcctaccgc aaccagaact gggccggcgc gctcgaagcc atcctgcaat gccgcgaggc
     3061 gggccgggaa ttcggccttg acgagttcta cgaccgctac gtggcgcgca tccgcaccct
     3121 tctggaccag ccgccggaag ccgactggaa cggcgtcttc gtcgccgaga cgaaataacg
     3181 cggcgcgcca gacgaccctc gaaaacgctc gggcgagatc gatccggatt gagtcaatcc
     3241 gccccatctc tttgaatcgc atcatctttt tcggggaggt ggccgccact
//
LOCUS       DATAIQ010000688         1574 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_451094, whole genome shotgun sequence.
ACCESSION   DATAIQ010000688 DATAIQ010000000
VERSION     DATAIQ010000688.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1574)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1574)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1574
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_451094"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..428)
                     /gene="pal"
                     /locus_tag="VHN20_11405"
     CDS             complement(<1..428)
                     /gene="pal"
                     /locus_tag="VHN20_11405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018043035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-associated lipoprotein Pal"
                     /protein_id="HEX2726419.1"
                     /translation="MALGAAACSSNQAADGFGAGGAATPGSAQDFAVNVGDRVFFESD
                     STDLSPTAVATLDKQAQWLSRYPRYAFLIEGHADERGTREYNFSLGSRRAQVVRDYLA
                     SRGVSSARMRSVSYGKERPVAVCNDISCWSQNRRAVTVLET"
     gene            complement(782..>1574)
                     /locus_tag="VHN20_11410"
     CDS             complement(782..>1574)
                     /locus_tag="VHN20_11410"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEX2726420.1"
                     /translation="RAIANGEFVVFYQPKVACADVRVVAAEALVRWKHPSKGLLLPAA
                     FLPVAEEAGLVAELSWHVLERAAMEMSNLARGDQPISLAVNVSATQFEQVDFAERVAS
                     ILDRSGLAPARLELELTESLAMHDPERVIERMGPLKRRGVRFAIDDFGTGYSSLSYLT
                     RLPIDTVKIDRSFIRAARDSATDRALVTTIFHMAESLKFQTVAEGIETEEDLAFVRKH
                     GAVLAQGFLFSPPMPYQEFALFCRTFRRRSLEAEPITQLPQAGTA"
BASE COUNT          265 a          505 c          538 g          266 t
ORIGIN      
        1 gtctcgagca cggtgacggc gcggcggttc tgcgaccagc acgagatatc gttgcacacc
       61 gccaccggac gctccttgcc gtacgacacg ctgcgcatgc gcgcgctcga gacgccgcgg
      121 gaggccaggt aatcgcgcac cacttgggcg cggcggctgc caagcgagaa attgtactcg
      181 cgggtgccgc gttcgtcggc atggccctcg atcaggaagg cgtagcgcgg gtagcgcgac
      241 aaccattgcg cctgcttgtc gagggttgcc acagccgtcg gcgacaggtc ggtcgaatcg
      301 ctttcgaaga acacccggtc cccgacattg accgcaaagt cctgggcact gcccggtgtc
      361 gcggcgccgc cggcgccgaa gccgtcggct gcctggttcg acgagcacgc agcggccccc
      421 agggccatcg cgagcacggc ggcgaatttc agggcagcaa gtccctttcg ggtgtgcgtc
      481 gaaaacgaca tcatcgaaac tccttcacgc acgtcttgcg acgttgcgtt catgactacc
      541 tccggggggt taagaggagg ttccgtcaac cttgatgaag gcttggcgtc gacgccgcaa
      601 aagccacgct ggccgtcaac gcatggaaag cggttaatcc ggggttaatt gcggcaaggg
      661 caaggcacca ggcaccactt tcctggcgaa aaccgttgcc ggctcgcggt ttcttgcggg
      721 gtgagtctct gttgccgcac tcgccgttcc ccgcgccccc acgccggcgc gcggcgcggg
      781 ctcaggcggt gccggcttgc ggcagctgcg tgatcggctc ggcttccagg ctgcggcgcc
      841 ggaaggtcct gcagaacagg gcgaattcct ggtacggcat gggtgggctg aacaggaagc
      901 cttgcgccag gacggcgccg tgcttgcgca cgaaggcaag gtcttcctcg gtctcgatgc
      961 cttccgcgac cgtctggaac ttcaggcttt cggccatgtg gaagatcgtc gtcacaagcg
     1021 cccggtcggt ggcgctgtcg cgcgccgccc tgatgaacga acgatcgatc ttgacggtat
     1081 cgatgggcag gcgcgtgagg tagctgaggc ttgaatagcc ggtgccgaaa tcgtcgatgg
     1141 cgaagcggac gccgcgtctt ttgagcggcc ccatgcgctc gatgacccgt tccggatcgt
     1201 gcatcgccag agattcggtg agctcgagct cgaggcgcgc gggggcgagg ccggagcggt
     1261 ccaggatgct ggccacgcgc tcggcgaagt cgacctgctc aaactgcgtc gccgagacat
     1321 tgacggcgag agagatcggc tggtcccccc gcgccagatt ggacatttcc atcgccgcgc
     1381 gttcgagcac gtgccagctg agttccgcga cgaggcccgc ttcttcggca accggcagga
     1441 aggcggcggg caggaggagc cccttgctcg gatgcttcca gcgcaccagc gcctcggcgg
     1501 ccaccacgcg cacatccgcg caggcgacct tcggctggta gaaaacgacg aattcgccgt
     1561 tggcgatcgc cctg
//
LOCUS       DATAIQ010000689         2007 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_451145, whole genome shotgun sequence.
ACCESSION   DATAIQ010000689 DATAIQ010000000
VERSION     DATAIQ010000689.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2007)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2007)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2007
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_451145"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..702)
                     /locus_tag="VHN20_11415"
     CDS             complement(<1..702)
                     /locus_tag="VHN20_11415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012706270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEX2726421.1"
                     /translation="MKEPEHSEFKAIGRPLRRKEDLRLLTGNGRFTDDFSMEGQVRAV
                     MVRSPHPHARILSIKADEARAMPGVLGVFTGQDCLADGLKPIPHEPVPKTKYDMKLSG
                     PGGSRIFIGPHMLLPADKARHVGEAVAMVVAETEEQALDAVEALQIDYEELPFVTDQR
                     AALAPGAPAVWDELPDNRLVDTLFGDRDATDRAFVAADHVLKMDFHVGRVTAVTIEPR
                     AALGAYDGATGRYTLY"
     gene            867..>2007
                     /locus_tag="VHN20_11420"
     CDS             867..>2007
                     /locus_tag="VHN20_11420"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014332823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HEX2726422.1"
                     /translation="MRRTNNKAPADFQEHVAALEARGLLVRVDRPVNKDTELHPLVRW
                     QFIGGFPEEARRAFLFTNVVGSRGERYDFPVVVGALAASSEIYAMGMGVSVEELGDIW
                     MSALDNPIPPEFVDNAPCHEVVMAGDDLTRPGGGLAGLPVPISTPGFDAAPYLTATVC
                     VTKDPETGVRNMGTYRAGLKALDRLGVRMASRLGGAGGYLHWLKYQKLKQPMPVAIVV
                     GCAPVVAFTGPQKLAIDQDEMAVAGGLAGRAMRVTRAKTVDLEIPADAEIVVEGLIDT
                     DLLEPEGPFGESHGHVALEDFNMSMRVTAITRKRKPMFASIISEVTPSESSILKKSAY
                     EALFFSHLKGHMDVKGIRRVVMHEPLTNLRPVLFLQFAQGAPQTEV"
BASE COUNT          325 a          655 c          678 g          349 t
ORIGIN      
        1 gtaaagcgtg tagcggccgg tcgcgccgtc gtaagcgccg agcgcggcgc gcggctcgat
       61 cgtgacggca gtgacgcggc cgacatgaaa gtccatcttg agcacgtggt cggccgccac
      121 gaaggcgcga tcggtcgcgt cgcgatcgcc gaacagcgtg tcgacgaggc ggttgtcggg
      181 gagttcgtcc cacaccgccg gcgcgccggg cgccagcgcg gcgcgctggt cggtgacgaa
      241 aggcagctcc tcgtagtcga tctgcagagc ttcgacggcg tcgagcgcct gctcctcggt
      301 ctccgccacc accatggcga cggcctcgcc gacatggcgc gccttgtcgg ccggcagcag
      361 catgtgcggg ccgatgaaga tccggctgcc gcccgggccg ctgagcttca tgtcgtattt
      421 ggttttcggc acaggctcgt gcgggatcgg cttgaggccg tcggccaggc aatcctggcc
      481 ggtgaagacg ccgagcacgc ccggcatggc gcgggcttcg tccgccttta tcgaaagaat
      541 gcgggcatgc gggtggggcg agcgcaccat cacggcgcgg acctgccctt ccatgctgaa
      601 atcgtcggtg aagcggccgt tcccggtgag gaggcgcagg tcttccttgc gtcgcaacgg
      661 ccggccgatc gccttgaatt ccgaatgctc gggctctttc atcgcgttct tccttgcagc
      721 ccattccttg ccggatcatg gccggctggg cgatttttga ccggctttcg cacgctgtcg
      781 cccggcgttg cccggctagc ggaaatccta tagcagggca accgattagc ggggccggct
      841 ccgcgatgac tggaacttac gggtcgatga gacgaacaaa caataaggcc ccggccgatt
      901 ttcaggagca tgtcgctgcg ctcgaggcgc gcggcctgct cgtgcgcgtc gaccgccccg
      961 tcaacaagga cacggagctg catccgctcg tgcgctggca gttcatcggc ggcttcccgg
     1021 aagaggcgcg gcgcgccttt ctgttcacga acgtcgtcgg atcgcgcggc gagcgctacg
     1081 actttcccgt cgtcgtcgga gctttggcgg cctcatccga aatctatgcc atgggaatgg
     1141 gcgtatccgt cgaggaactc ggcgacatct ggatgagcgc cctcgacaac ccgatcccgc
     1201 ccgaattcgt cgacaatgca ccgtgccacg aagtggtgat ggcgggcgac gacctgacgc
     1261 gcccgggcgg cggcctcgcc ggcctgcccg tgccgatctc tacgccgggc ttcgacgccg
     1321 cgccctatct gacggcgacg gtgtgcgtga ccaaggatcc cgagaccggc gtgcgcaaca
     1381 tgggcaccta ccgggccggc ctcaaggcgc tggacaggct cggcgtgcgc atggcctcgc
     1441 gcctcggcgg cgccggcggc tacctgcact ggctcaaata ccagaagctc aagcagccaa
     1501 tgcctgttgc gatcgtggtc ggttgcgcgc cggttgtcgc cttcaccgga ccccagaaac
     1561 tcgccatcga tcaggatgag atggccgtcg ccggcggact ggccggccgg gcgatgcggg
     1621 tcacgcgcgc caagacggtc gatctcgaaa ttccggccga tgccgagatc gtggtggagg
     1681 gcctgatcga caccgatctg ctcgagcccg agggtccgtt cggcgagagc catggccacg
     1741 tcgcgctcga ggatttcaac atgtcgatgc gcgtgacggc gatcacgcgc aagcgcaagc
     1801 cgatgttcgc gtcgatcatc agcgaggtga cgccgagcga gtcgagcatt ctcaagaagt
     1861 ctgcctacga agcgctgttc ttctcgcatc tcaaggggca catggacgtc aagggcatca
     1921 gacgggtcgt catgcacgag ccgctgacga accttcgtcc cgtcctgttc ctgcaattcg
     1981 cgcaaggcgc gccgcagacg gaggtat
//
LOCUS       DATAIQ010000690         3882 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_200988, whole genome shotgun sequence.
ACCESSION   DATAIQ010000690 DATAIQ010000000
VERSION     DATAIQ010000690.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3882)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3882)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3882
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_200988"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..431)
                     /locus_tag="VHN20_11425"
     CDS             complement(<1..431)
                     /locus_tag="VHN20_11425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726423.1"
                     /translation="MTLTRHLRTCASATAALLAGALAAPAEAQDPDDWYHRQPVPSLP
                     EQLNAEIRPHTDARRPERIERIRDVALAIRACWRPPRGALGYSGQELSIRMSFSREGR
                     LIGRPRITYYKRGADPDTRDAFVESVRAALERCVPLPFSATL"
     gene            complement(431..979)
                     /locus_tag="VHN20_11430"
     CDS             complement(431..979)
                     /locus_tag="VHN20_11430"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012592510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEX2726424.1"
                     /translation="MFRKLMMILALSLATAVPAAAQQADPQNTVYLETKDGRVTIRLR
                     PDLAPKHVAQIKALTKRGFYNGIVFHRVIPGFMAQTGDPTGTGTGASDLPNIPAEFTQ
                     TPFKRGSVGMARSGQPNSANSQFFICFEGCGSLTGQYTLFGEVVSGMDVVDKIKKGDQ
                     ARNGHVTNPDKIVKMQLAADAR"
     gene            complement(1102..1599)
                     /gene="coaD"
                     /locus_tag="VHN20_11435"
     CDS             complement(1102..1599)
                     /gene="coaD"
                     /locus_tag="VHN20_11435"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015931657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004595 - pantetheine-phosphate
                     adenylyltransferase activity [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HEX2726425.1"
                     /translation="MTRTALYTGTFDPVTNGHLDVVRQACGLADRLVIAIGVHSSKAP
                     IFSAGERADMLREVCGPIAAGKGTALEVVTFDDLTVAAARRAGATTIVRGVRDGTDLD
                     YEMQMAAMNATMAPDVQTVFVPASPAVRPITATLVRQIARMGGDVSAFVPGPVATRLK
                     AKLAP"
     gene            complement(1662..2279)
                     /locus_tag="VHN20_11440"
     CDS             complement(1662..2279)
                     /locus_tag="VHN20_11440"
                     /inference="COORDINATES: protein motif:HMM:NF013933.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family translocator"
                     /protein_id="HEX2726426.1"
                     /translation="MLNPELFVAFLLITFVLIITPGPVVTLVIATGATEGPRAALVTV
                     LGTTVGSGLLVGAIAFGLSWLLKSSVLVFEVIRWIGAAYLVWLGIQAWRQAGRAAEAP
                     TPVGQVHFWRGFLVALSNPKTIAFFTAFLPQFVDPGLPAEFQLAVMCAVSVLMAAVFD
                     SIWGIAAGLGRAWFMKPARARLLRRLSGTVLIGGGVWLSLARRPA"
     gene            complement(2454..3659)
                     /locus_tag="VHN20_11445"
                     /pseudo
     CDS             complement(2454..3659)
                     /locus_tag="VHN20_11445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015930708.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase C-terminal beta-propeller
                     domain-containing protein"
     gene            3654..3882
                     /locus_tag="VHN20_11450"
                     /pseudo
     CDS             3654..3882
                     /locus_tag="VHN20_11450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020087259.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase C-terminal beta-propeller
                     domain-containing protein"
BASE COUNT          603 a         1307 c         1368 g          604 t
ORIGIN      
        1 agggtggcgg agaagggcag cggcacgcag cgctccaggg cggccctgac ggactccacg
       61 aacgcgtcac gcgtatccgg atcggcgccg cgcttgtaat aggtgatccg cggccggccg
      121 atgagccgcc cttcgcgcga aaagctcatg cggatgctca gctcctggcc cgagtaaccg
      181 agcgcacccc gtggcggtcg ccagcaggcg cggatggcga gggcgacgtc acggatgcgc
      241 tcgatgcgct cgggccgccg cgcatccgta tgcggacgga tctccgcatt gagctgctcg
      301 ggaagcgagg ggaccggctg gcgatggtac cagtcgtcgg gatcctgggc ctctgcgggc
      361 gcggcgagcg cgccggcgag cagagccgcc gtcgcgctcg cgcatgtccg caaatgccgc
      421 gtcaaggtca tcagcgcgcg tcggccgcaa gctgcatctt gacgatcttg tcggggttcg
      481 tgacatggcc gttgcgcgcc tggtcgccct tcttgatctt gtcgaccacg tccatgccgg
      541 acaccacctc gccgaacagc gtgtattgcc cggtgaggga gccgcagccc tcgaagcaga
      601 tgaagaactg gctgttggcc gagttcggct ggccggagcg cgccatgccg acggagccgc
      661 gcttgaacgg cgtctgcgtg aactcggccg ggatgttggg caggtccgag gcgccggtgc
      721 cggtgccggt cggatcgccg gtctgcgcca tgaagcccgg gatcacgcgg tggaatacga
      781 tgccgttgta gaagccgcgc ttggtcagcg ccttgatctg cgccacgtgc ttcggcgcca
      841 ggtcgggccg caggcggatg gtgacgcggc cgtccttcgt ctcgagatag accgtgttct
      901 gcggatcggc ctgctgcgcg gcggccggga ccgcggtcgc gagcgaaagt gccaggatca
      961 tcatgagctt gcgaaacatt aagggcctcc tcccatcaag gggaacgatc gcgcgggcga
     1021 cctcgaaaag gagtgctgct atagcgccgc gcgctgcgcc gcactaccct tcggcgggtt
     1081 gaatgtgccg gcggtccgcg ctcagggcgc gagcttggcc ttgaggcggg tcgcgaccgg
     1141 ccccggcacg aacgcgctga cgtcgccgcc catcctggcg atctgacgca cgagcgtcgc
     1201 cgtgatcggc cgcaccgccg gcgacgccgg cacgaagacc gtctgcacgt ccggcgccat
     1261 cgtcgcgttc atggccgcca tctgcatctc gtagtcgagg tcggtgccgt cgcggacgcc
     1321 gcgcacgatg gtcgtggcgc cggcgcggcg cgcggccgcg accgtgaggt cgtcgaaggt
     1381 gaccacctcg agggcggttc ccttgccggc cgcgatcggc ccgcatacct cgcgcagcat
     1441 gtcggcgcgc tcgcccgccg agaagatcgg cgccttgctc gaatgcacac cgatggcgat
     1501 gaccagccga tcggcgaggc cgcaggcctg gcgcaccacg tcgaggtggc cgttggtgac
     1561 gggatcgaag gtgccggtat agagcgcggt gcgggtcatg ttcctgggtt agcgggcggc
     1621 ccgtttctcc gcaagcgcga cgccgaggtg gttcaacgct ctcatgccgg ccggcgcgcc
     1681 agcgacagcc acacgccgcc gccgatcagg acggtgcccg agagccggcg gagcagcctc
     1741 gcgcgcgccg gcttcatgaa ccaggcccgc ccgagcccgg cggcgatgcc ccagatcgaa
     1801 tcgaagaccg ccgccatcag cacggagacg gcgcacatca cggcgagctg gaactccgcc
     1861 ggcaggccgg gatcgacgaa ttgcggcagg aacgccgtga agaaggcgat cgtcttgggg
     1921 ttggacaggg cgacgaggaa tccgcgccag aaatgcacct gcccgactgg cgtcggcgcc
     1981 tcggcggccc ggcccgcctg gcgccacgcc tggatgccga gccagaccag ataggccgcg
     2041 ccgatccagc ggatcacctc gaacaccagg acggagctct tgagcagcca ggacaggccg
     2101 aaggcgatgg cgccgaccag gaggccgctg ccgaccgtgg tgccgaggac cgtcacgagc
     2161 gcggcgcgcg gcccctcggt cgcaccggtc gcgatcacca gcgtgaccac gggcccgggc
     2221 gtgatgatca gcacgaacgt gatcagcagg aaggcgacga acagctccgg attcaacatg
     2281 gccgccccct gtcattatga agctcgcgcg ggctgcgcaa ttcgtcgtcg ccgaaagccg
     2341 cctgccgcga acttagccgg ctccgcacca aagaagaaag ccgggcggac ccggctttcg
     2401 gaactcgctc acccgagttc cgcatgaagg acgaaagtcg agcagggctt tgctcagccc
     2461 tccccgttgg cgctctcgtc ctcgccctcg atatgctcga ccgagacgac gcgctcgccg
     2521 tcggtcttga acaccgtcac gccctgggtc gagcggccgg cgatgcggat gtcgtcgacc
     2581 ggcacgcgga tcgtctggcc gccgtcggtg atgagcatga tctggtcgtc atggccgacc
     2641 gggaacgagc cgacgaggcg gccgttgcgg tcgttcaccg acatggcgac gatgcctttg
     2701 ccgccgcgtc ccgtgatcct gtattcgaag gacgaggtgc gcttgccgta gcccttctcg
     2761 gagatggtga ggatgaactg ctcgagcgcg ctcatctccg cgtagcgctc ctgcgacaga
     2821 gcgacatccg cggtcggggc ctcctcgtcg gtctcgacgc ccgcctccgc ggcctgctcg
     2881 cccgtcaccg cccggcgcat cttgagatag ccggcgcgct cctcggcgct ggcctcgaca
     2941 tgcagcagga tcgccatgga gatgatctgg tcgccggcgc cgagattgat gccgcgcacg
     3001 ccggtcgagt cgcggccctt gaacacgcgc acctcgggca ccgggaagcg gatgcactgg
     3061 ccctgcgccg tggtgagcag gacgtcgttg ccttccgagc agatctgcac gtcgacgatg
     3121 gcgtcgccct cgtcgagctt catggcgatc ttgccgttgc ggttgacctg gacgaagtcg
     3181 gacagcttgt tgcgccgcac gttgccgcgc gcggtggcga acatcacgtc gagcgtctcc
     3241 caggactttt cgtcctcggg cagcggcatg atcgtggtga tgcgctcgcc ctcctgcagc
     3301 ggcagcatgt tgatcagcgc cttgccgcgg gcgttcggcg ccgtcagcgg cagccgccac
     3361 accttctcct tgtaggcctg gccgcgcgag gagaagaaca ggatcggcgt gtgggtgttg
     3421 gcgacgaaca gccgggtgac gaaatcctcg tcgcgtgtct gcatccccga ccggcccttg
     3481 ccgccgcggc gctgcgcccg gtaggtcgag agcggcacgc gcttgatgta gccggcgtgc
     3541 gacacggtga cgaccatgtc ctcgcgctgg atgaggtcct cgtcgtcgag gtccgcgtcc
     3601 cactcgatca ggatggtctt gcgcggcgtc gcgaaggccg ccttcacctc ggcgagctcc
     3661 tcgagatcaa ggagcggttc gcgacaccgc gacgcactgc gatcgaagat gtcgagttcg
     3721 aagcggatat cgaggcgctg atccagcgtg aggcgatggt cgtgactgtg agccacgccg
     3781 gctatatcaa gcgcgtgccg ctctcgacct accgcgcgca gcgccgcggc gggcgcggcc
     3841 gcgccggcat ggcgatccgc gaagaggatt tcctgagcga gg
//
LOCUS       DATAIQ010000691         5846 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_405503, whole genome shotgun sequence.
ACCESSION   DATAIQ010000691 DATAIQ010000000
VERSION     DATAIQ010000691.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 5846)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5846)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5846
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_405503"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..516
                     /locus_tag="VHN20_11455"
     CDS             <1..516
                     /locus_tag="VHN20_11455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HEX2726427.1"
                     /translation="VRRKVEVVGMPQWSDDEQRFARELQANAGAKAIGLRTDVRFPQG
                     EAEQKWSCNDAGDVSWKVPMVKLYYPANVPGLAAHHWAAGAPLATSIAHKGAVVGAKV
                     MAGAVVECFANPAVVAEAKQTFKEELGDARFVSLLPPDQKPPVDLNRDTMARFRPLMA
                     RHYLTEVPEFS"
     gene            549..1589
                     /locus_tag="VHN20_11460"
     CDS             549..1589
                     /locus_tag="VHN20_11460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEX2726428.1"
                     /translation="MKLTRWVACLVAGLGMVGAARAQDAVADFYRGKQIRIIVGSGTG
                     GGYDLYARYLARHMSKHMPGKPSVIVQNMPGAGGILAANTLYNRAPRDGTTIGIVQGT
                     LTYAQIGKSPSVQFDMLKFGWLGSANITSNICALSPRAGITSGRDLLEKKVVIGGSGG
                     STDFVPNLLNALVGTKFDIVKGYKSTTDIMPATERKEVDGICGWGWDGAQVNGRDYFA
                     RGVVSVALESGTERHPDLAARGVPFMMDLVTNEENKKILRFLFSYLVYVRPFIAPPEV
                     PAERLAALQKAFADTLKDPELLAEAEKAGAEIRYVSPDQVKAALGDALEAPQAIRDRG
                     LEELRKAGWEGL"
     gene            complement(1595..2836)
                     /locus_tag="VHN20_11465"
     CDS             complement(1595..2836)
                     /locus_tag="VHN20_11465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020175647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX2726429.1"
                     /translation="MHTPPLVLAVDDTPENLEILRMRLEAQGYAVAEAVDGEDGLAKA
                     RALRPDLILLDIMMPKRDGISVVRELKQDPELRAIPVILVTAKADTRDVVQGLDAGGD
                     DYLTKPFEHSALLARVRSMLRQKALSDTVQAQTRELAEWNTALEERVAAQVGEIERIG
                     RLRRFLSPQIAEAVVSSDGGESVLRSHRRDVTVMFCDLRGFTAFAETAEPEEVMAVLG
                     EYHTCLGALIFQYGGTLERFLGDGLLVVMNDPVPCPDHPAQAVRMALEMRDCMRVLET
                     KWRKQGHELGFGIGIARGYATLGQIGFEGRLEYSVIGTVPNLAARLCGEAAAGQILVS
                     QRVFTTLEDELDATLVGELALKGFHRPMPAYEVRGWRQSVHPSPSGEERVAGRPAWGH
                     AGPEYGASRHEPTLPSPEGEG"
     gene            complement(2841..3821)
                     /locus_tag="VHN20_11470"
     CDS             complement(2841..3821)
                     /locus_tag="VHN20_11470"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX2726430.1"
                     /translation="MRRRTFIAAFVGAAAHPLSAAGQSAPLPVVGFVNGASPGAFAHL
                     AASFQKGLQEEGFTDGRNVTIDARWAEGRYERLPAFLQEFVARKVAVVALTGGAMPHL
                     TDNPATAKVPIIFVMGGDPVRAGLVASLNQPGGNVSGITQLTNELAAKRLGLLHELVP
                     RMNKVGILINPDFPDSGPQLRELENAIARAGLSAVVVRAQAEADFDAAFLRLEQERPD
                     ALLIGADPFFNSRRSQLVALVMRLRIPTIYEFREFAEAGGLISYGTDLADAYRLTGRY
                     VGRVLKGTKPGDLPVIQAAKFELIINLKTANALGLDIPPTLLARADEVIE"
     gene            complement(3818..4708)
                     /locus_tag="VHN20_11475"
     CDS             complement(3818..4708)
                     /locus_tag="VHN20_11475"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX2726431.1"
                     /translation="MGYDENDQEAQARVTALRRQLDDLGWREGSNVTIEARWIAGNTE
                     RMDAAAADLARLNPAVIVGATTGVLRALLRHTRTIPIVFLSVSDPVGDGFVASLASPG
                     GNATGFTNLERSLGGKWVQILQEIAPPLKRAAALFNPATSADRGGYYGGPFKTAAATL
                     GIEPVERPAHATAEIDGIVASLAGDPPGGLIVMPDVFTVVNRQRIIAAAQTHRVPAIY
                     PYKYFVADGGLAAYGIDLFDQYRRAAVYVDRIFRGESPATLPVQGPAKFDLAVNLKTA
                     KGLGLAIPPTFLARVDEVIE"
     gene            complement(4807..5787)
                     /locus_tag="VHN20_11480"
     CDS             complement(4807..5787)
                     /locus_tag="VHN20_11480"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX2726432.1"
                     /translation="MRRRQFIAALVGAAWPFGAGAEQPGASARIGFLPLGSEPSSYDR
                     SLVDAFRQGLREVGLAEDHDVSLDVVWVRNDTDYAQAAHELVQRGASILVPAGTSASL
                     EAKRRTSTVPIVFVTVGDPVGIGLVEMLARPGGNATGFSDILLDLSSKFVDLATELSK
                     PEPVVDYLRYTAWGNGPQRYNATERAARASRVELRARGIGEIAELDDALGSLKQRGAA
                     TIVVQPSPFTYRHRNRLIESAKDRGLATIFGWPVAAREGALIGYGPDYAYMYRRAAAY
                     VDRILKGARPADLPVEQPARLEFVINLKTAKGLGIAVPTALLAQADEVIE"
BASE COUNT          964 a         1929 c         2023 g          930 t
ORIGIN      
        1 gtgcggcgca aggtcgaggt cgtcggcatg ccgcaatgga gcgacgacga gcagcgcttc
       61 gcgcgcgagc tgcaggccaa tgcgggcgcc aaggcgatcg ggctgcgcac cgacgtccgc
      121 tttccgcaag gcgaggccga gcagaaatgg tcgtgcaacg acgcgggcga cgtatcgtgg
      181 aaggtgccga tggtgaagct ctattatccg gccaacgtgc cggggctcgc ggcgcaccac
      241 tgggccgccg gcgcgccgct cgcgacctcg atcgcccaca agggcgcggt cgtcggcgcc
      301 aaggtgatgg cgggcgcggt cgtggaatgc ttcgccaatc cggccgtcgt ggcggaagcc
      361 aagcagacct tcaaggagga gctcggagac gcccgcttcg tctcgctgct gccgccggac
      421 cagaagccgc cggtcgacct caatcgcgat acgatggcca ggttcaggcc gctcatggcc
      481 aggcactatc tcacggaggt cccggaattt tcatgaggac gtggttcagc gaagaaagga
      541 gcgtgcagat gaaattgacg cggtgggtgg cttgtctcgt cgccgggctc ggcatggttg
      601 gcgctgcgcg ggcgcaggac gcggtcgcgg atttctaccg cggcaagcag atccggatca
      661 tcgtcggatc gggcaccggg ggcggctacg atctctatgc ccgctacctg gcgcgccaca
      721 tgtcgaagca catgcccggc aaaccgagcg tgatcgtcca gaacatgccg ggagccggcg
      781 gcatcctggc ggccaacacc ttgtacaacc gcgccccgcg cgacggcacg acgatcggca
      841 tcgtccaggg cacgctgacc tacgcccaga tcggcaagtc gccgagcgtg caattcgaca
      901 tgctcaagtt cggctggctc ggcagcgcca acatcacatc gaacatctgc gcgctgtcgc
      961 cgcgcgccgg catcaccagc ggccgtgacc tcctcgagaa gaaggtggtc atcggcgggt
     1021 cgggcggctc gaccgacttc gtgccgaacc tgctcaacgc gctcgtcgga accaagttcg
     1081 acatcgtcaa gggctacaag tcgaccaccg acatcatgcc ggcaaccgag cgcaaggaag
     1141 tcgacggcat ctgcggctgg ggttgggacg gggcacaggt caacgggcgc gattattttg
     1201 cccgcggcgt cgtatcggtc gctctggaaa gcggcaccga acgccatccg gatctcgccg
     1261 cccgcggcgt gccgttcatg atggacctgg tcacgaacga ggagaacaag aagatcctgc
     1321 gcttcctgtt cagctatctc gtctacgtgc ggccgttcat cgcgccgccg gaggttccag
     1381 ccgagcgcct ggcggcgctg cagaaggcgt tcgcggacac cctcaaggat cccgagctgc
     1441 tcgccgaagc cgagaaggcc ggcgcggaga tccgctacgt cagcccggac caggtcaagg
     1501 cggccctcgg cgatgccctc gaggcgccgc aggcgatccg cgatcgcggc ctcgaggagc
     1561 tgcgcaaggc cggctgggaa gggctgtgag acgcctatcc ctccccttcg ggggagggca
     1621 gggtgggctc atgtcgcgaa gcaccatatt cgggaccggc gtgaccccac gccggtcgcc
     1681 ccgcgactcg ctcctcccct gaaggggagg gatggacgct ctgccgccag ccccgcacct
     1741 cgtaggccgg catcggccgg tggaaaccct tcaacgcgag ttcgccgacc agcgtcgcgt
     1801 cgagctcgtc ctcgagcgtc gtgaacaccc gctggctgac cagaatctgg ccggccgccg
     1861 cctcgccgca caggcgcgcg gcgaggttcg gcaccgtgcc gatcaccgaa tattcgaggc
     1921 ggccctcgaa gccgatctgg ccgagcgtgg cgtagccccg ggcgatgccg atgccgaagc
     1981 cgagctcgtg gccctgcttg cgccacttcg tctccagcac gcgcatgcag tcacgcatct
     2041 ccagcgccat gcgcactgcc tgggccggat gatcggggca ggggacgggg tcgttcatca
     2101 cgaccagcag cccgtcgccc aggaagcgct cgagcgtgcc gccgtattgg aagatcagcg
     2161 cgccgagaca cgtgtgatac tcgcccagca ccgccatgac ctcctccggc tcggccgtct
     2221 cggcgaaggc cgtgaagccg cgcaggtcgc agaacatcac cgtgacgtcg cggcggtggc
     2281 tgcgaagcac gctttcgcca ccgtcggacg agacgacggc ctcggcgatc tgcggcgaca
     2341 ggaagcggcg cagccggccg atgcgctcga tctcgccgac ctgcgcggcg acgcgttcct
     2401 ccagcgccgt gttccactcg gcgagttcgc gcgtctgcgc ctgcaccgtg tcgctgagcg
     2461 ccttctggcg cagcatcgag cgcacgcgcg cgagcagggc ggaatgttcg aacggtttcg
     2521 tcaggtagtc gtcgccgccg gcgtcgaggc cttggacgac gtccctggtg tcggccttgg
     2581 cggtgaccag gatcaccggg atggcgcgca actcggggtc ctgcttgagc tcgcgcacga
     2641 cgctgatgcc gtcgcgcttc ggcatcataa tgtcgagcag gatgaggtcc ggcctgagcg
     2701 cgcgcgcctt ggcgaggccg tcctcgccgt ccaccgcttc cgcgaccgcg taaccctgcg
     2761 cctcgaggcg catgcgcagg atctcgaggt tttccggcgt gtcgtcgacg gcgaggacga
     2821 ggggaggggt atgcatcgtg ctactcgatc acctcgtcgg cgcgggcgag cagagtcggc
     2881 gggatatcga ggccgagcgc attcgcggtc ttgaggttga tgatgagctc gaactttgcc
     2941 gcctgaatga cgggaaggtc gcccggtttc gtgcccttga ggacacggcc gacatagcgg
     3001 ccggtcaagc ggtaagcgtc ggcgagatcg gtgccgtagc tgatcaggcc accggcttcg
     3061 gcgaactcgc ggaactcgta gatcgtcgga atgcgcaggc gcatcaccaa ggcgaccagt
     3121 tggctgcggc ggctgttgaa gaacggatcg gccccaatca gcagggcgtc cggtcgctcc
     3181 tgctcgagac gcaagaacgc cgcgtcaaag tcagcttcgg cctgagctct cacgaccact
     3241 gcggacaacc ccgcgcgcgc aatggcgttc tcgagttccc gcaattgcgg tcccgagtcc
     3301 ggaaagtcgg gattgatcag aatgccgacc ttattcatcc ggggcacgag ctcgtgcagc
     3361 agcccgagtc gcttcgcggc gagctcgttc gtgagctggg taattcccga gacgttgccg
     3421 cctggctggt tcaggctggc caccagcccg gctcgcaccg gatcgccgcc catgacgaag
     3481 atgatcggca cctttgccgt ggccggattg tccgtcaggt gcggcatggc cccgccggtg
     3541 agagccacga cggcaacttt cctggccaca aactcctgca ggaaagccgg caaccgttcg
     3601 tagcggccct cggcccagcg cgcgtcgatc gtgacgttgc gcccgtccgt gaacccctct
     3661 tcctgaagtc ccttctggaa actcgcggcg aggtgggcaa aggcccccgg cgaggcgccg
     3721 ttgacgaacc cgaccactgg cagcggagcg gactggcccg ccgccgatag cgggtgcgcg
     3781 gcagcgccaa cgaatgccgc gatgaatgtc cgccgcctca ttcgatcacc tcgtcgacgc
     3841 gagcgaggaa cgtcggggga atcgcgaggc cgaggccttt ggccgtcttg aggttgacgg
     3901 cgaggtcgaa cttggccgga ccctgcacgg gcagcgtggc tggggattcg ccgcggaaga
     3961 tgcgatcgac gtagacggcg gcgcgtcggt actggtcgaa caggtcgatg ccgtaggcgg
     4021 cgagcccgcc gtcggcgacg aagtatttgt agggatagat ggccgggacg cggtgcgtct
     4081 gtgcggcggc aatgatccgc tggcggttca cgaccgtgaa cacgtcaggc atcacgatca
     4141 ggccgccggg gggatcgccg gcgagcgacg cgacgatgcc gtcgatctcc gcggtagcgt
     4201 gcgcgggccg ttcgacgggt tcgattccga gggttgccgc ggccgtcttg aacggcccgc
     4261 cgtaatatcc gccgcggtcg gctgaggtcg ccggattgaa caaggccgcc gcgcgcttca
     4321 ggggaggtgc gatctcttgc aaaatctgga cccattttcc gccgagggaa cgttcgagat
     4381 tcgtgaagcc ggtggcgtta ccgccggggc tggcaaggct cgcgacaaag ccgtcgccga
     4441 cggggtcgct caccgacagg aacacgatcg ggatcgtgcg cgtatgccgc agcaatgcac
     4501 ggaggacgcc ggtcgtggcg cccacgatca cagcaggatt caatcgtgca agatccgcgg
     4561 cggcggcatc catgcgttcg gtgttgccgg cgatccagcg ggcctcgatc gtgacgttgc
     4621 ttccctcgcg ccagccgagg tcgtcgagct gccgccggag agccgtgacg cgcgcctggg
     4681 cttcctggtc gttctcgtcg tagcccatca ggatgccgat gcgccgtggg cgagttggtt
     4741 gctgcgcact cgcactgaac cgcccgcccc aagcggcggc cgcaaccgcg atgaatgtcc
     4801 ggcgcctcac tcgatcacct cgtcggcttg cgcgagaagc gctgtcggca ccgcgatccc
     4861 gagccctttc gccgttttga ggttgatcac gaattccaac cgggcaggct gctcgacggg
     4921 cagatcggcg ggtctcgccc ccttgaggat gcggtcgacg taggccgctg cgcgtcggta
     4981 catgtaggca tagtccgggc catagccgat cagggcgcct tcacgcgccg ccaccggcca
     5041 gccgaagatc gttgcaagcc cacggtcctt ggcagactca atgagccggt tgcgatggcg
     5101 gtatgtgaac gggctcggct ggacgacgat ggtggcggcg cccctttgct tcaggctccc
     5161 aagcgcgtcg tcgagctcgg cgatctcgcc gatgccgcgc gcccgaagct ccacgcgcga
     5221 ggcgcgcgcg gcccgctcgg tcgcgttgta gcgctggggc ccattccccc acgcggtata
     5281 ccgcagatag tcgacgaccg gctcgggctt gctcaactcc gtagccaggt cgacgaattt
     5341 gctgctcaga tcgagcagaa tgtcgctgaa cccggtggcg ttgccgcccg gtcgcgccag
     5401 catttcgacc agtccgatgc cgaccgggtc gccgacggtg acgaagacga tgggaaccgt
     5461 cgaggtgcgc cgcttcgcct ccagggatgc gctggtgccg gccggcacga gaatgctggc
     5521 gccgcgctgc accagttcgt gcgccgcttg cgcgtaatcg gtgtcgttgc ggacccagac
     5581 cacatcgaga ctgacgtcgt gatcctcggc gaggccgacc tcgcgcagcc cctggcgaaa
     5641 tgcgtcgacg agcgagcgat cgtacgaact gggctcggag ccgagcggga gaaagccgat
     5701 gcgcgccgaa gcgccaggct gctcggcccc ggcgccgaac ggccatgcag cgccgaccag
     5761 cgcggcgatg aattgccggc gcctcattcg atgacctcgt cggcgcgggc gagaagggtc
     5821 ggcggaatgt cgaggccaag cgcttt
//
LOCUS       DATAIQ010000692         2399 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_313167, whole genome shotgun sequence.
ACCESSION   DATAIQ010000692 DATAIQ010000000
VERSION     DATAIQ010000692.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2399)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2399)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2399
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_313167"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(127..1074)
                     /locus_tag="VHN20_11485"
     CDS             complement(127..1074)
                     /locus_tag="VHN20_11485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012321758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent phosphohydrolase"
                     /protein_id="HEX2726433.1"
                     /translation="MLNPTEIVAGILGEQLADNYMRAYSRREPRYAEAIGEAAKLVLE
                     RIGLSDALYHSSEHTAFVTLVGQDILRGERLRRDVTAEDWLHFTLATLTHDIGYIRGI
                     CRADRPGAYVIDTDGKTVTPPRGASDAFLGPWHIERSKLAVRERFGDHPFIDADRICG
                     AIELTRFPVPEDDDYAETNTEAGLLRAADLIGQLADPFYPRKLNALFHELQETGYAAR
                     YGYATPADVADQYPRFFWSKVEPFIGDALPYLELTVDGRQWIANLYCNVFEIEHGRRS
                     MGPHSGEDAVDGGRVGDGSRLRVEPKPQRGARRRSVPHA"
     gene            complement(1170..1946)
                     /locus_tag="VHN20_11490"
     CDS             complement(1170..1946)
                     /locus_tag="VHN20_11490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020174782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HEX2726434.1"
                     /translation="MPAVAQQRSITVASTTSTEQSGLFGYLLPRFTEKTRIQVKVVAL
                     GTGQALDVGRRGDADVVFVHDKDAEQKFLVEGFATTRQDVMYNDFVIAGPRADPAKAA
                     GKDVLEGLRRVANARAPFISRGDRSGTHAAELRYWKDAGVDLAAIKADWYKEIGQGMG
                     PTLNTASAQNAYVLTDRGTWLSFKNRGDLVLLVEGDQRLFNQYGAMLVNPARHSHVKA
                     ADGQAFVDWLVSAEGQKVIAGYKIGNEQLFFPNASGSPRS"
     gene            2122..>2399
                     /locus_tag="VHN20_11495"
     CDS             2122..>2399
                     /locus_tag="VHN20_11495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003607091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEX2726435.1"
                     /translation="MQVELRVGGLITVNGHEIALGQTFGLLDAIARDRSVRAAAERLE
                     VSYRSAWGRVLSLEQAIGQPVVEKTKGHGSVLTPFGEELRRALEAPLN"
BASE COUNT          373 a          773 c          825 g          428 t
ORIGIN      
        1 cgtgcatcgc gcttgcggtc gctttgctgc tgctcggtta ccgcgccctc gttgcctcct
       61 caggcgagga ggcgggggag cgctcagaaa ggctgctcgg ctgcgtcgag ctgcctcgct
      121 cttctctcac gcgtgcggga cacttcgccg cctggcgcca cgttggggct tgggctccac
      181 ccgcagccgc gagccgtcgc cgaccctccc gccgtcgaca gcgtcttcgc cgctgtgcgg
      241 ccccatgctg cggcgcccgt gctcgatctc gaagacgttg caatagagat tggcgatcca
      301 ctgccggccg tcgacggtga gctcgagata ggggagggcg tcgccgatga acggctcgac
      361 cttgctccag aagaaacgcg ggtattgatc ggcgacgtcg gcaggcgtcg cgtagccgta
      421 gcgcgccgca tagccggtct cctgaagctc gtgaaacagg gcgttgagct tgcgcggata
      481 gaacgggtcc gccagctgcc cgatcaggtc cgcagcgcgc agaagccccg cctcggtgtt
      541 ggtctcggcg taatcatcgt cctccggaac cgggaagcgg gtcagctcga tggcgccgca
      601 gatgcggtcg gcgtcgatga acgggtggtc gccgaagcgt tcgcgcaccg cgagcttgga
      661 gcgctcgata tgccacggcc cgaggaacgc gtccgatgcg ccgcgcggcg gcgtcacggt
      721 cttaccgtcc gtgtcgatca cgtaggcgcc gggccggtcg gcccggcaga tgccgcggat
      781 gtagccgata tcgtgcgtca gcgtcgccag cgtgaagtgc agccagtctt cggcggtgac
      841 gtcgcggcgc agccgctcgc ccctgaggat gtcctgcccg accagggtca cgaaggcggt
      901 gtgctcggac gagtggtaaa gcgcatcgct cagcccgatg cgctcgagga caagcttcgc
      961 ggcctcgccg atcgcctccg cgtagcgcgg ctcgcggcgg ctgtaggcgc gcatgtagtt
     1021 atcggcgagc tgctcgccga ggatgccggc aacgatttcc gtcgggttga gcatgagggc
     1081 ctcctccgtc aagcgaagcg ctgcccgagt cgatcatgct cccgccgcag ccctcataca
     1141 accgcgacgt ccgtcccgat gcgatctggt catgaacgcg gcgagccgct cgcattcggg
     1201 aagaaaagct gctcgttgcc gatcttgtaa ccggcaatga ccttctgccc ttcggccgac
     1261 acgagccagt caacgaaggc ctgtccgtcc gcggctttga cgtgcgaatg cctggccgga
     1321 ttgaccagca tcgccccgta ttggttgaac aggcgctgat cgccttcgac gagaaggacg
     1381 agatcaccgc gatttttgaa ggacagccac gtgccgcggt cggtcagcac atatgcgttc
     1441 tgcgcggagg ccgtgttgag ggtcgggccc atgccctggc cgatctcctt gtaccagtcg
     1501 gccttgatgg ccgcgagatc gacgccagcg tccttccagt agcgcagctc cgccgcatgc
     1561 gtgcccgacc ggtcgcctcg ggagatgaac ggcgccctgg cgttggcaac gcgccggaga
     1621 ccttcgagga cgtccttgcc ggctgccttg gcagggtcgg ccctggggcc cgcgatcacg
     1681 aaatcgttgt acatcacgtc ctggcgcgtg gttgcgaagc cttccacgag gaatttctgt
     1741 tccgcgtcct tgtcgtggac gaacacgacg tcggcgtcgc cccggcgacc gacgtcgagc
     1801 gcctgtcccg tgccgagggc cacgaccttc acttggatgc gggtcttctc ggtgaagcgc
     1861 ggcagcagat atccgaacag gcccgactgc tcggtcgacg tcgtcgaggc gaccgtgatc
     1921 gagcgctgct gcgccaccgc gggcatgacc gcgaggcagc cgagcgcaag tccgaacagg
     1981 gcacggcgaa cgagctgcat ggcggttctc ccgtcgtgag aaagggtggc cggcaggttc
     2041 ctgccacgga aaccctggcc ttcgtcatga cgctggtatg ctatggtgcc aatctcaaga
     2101 tcaatatgaa gtgggctgca tatgcaggtt gagcttcggg ttggcgggct gatcacggtc
     2161 aacggccacg agatcgctct cgggcagact tttgggcttc tcgatgccat cgcccgggac
     2221 cgttcggtcc gcgccgcggc cgagcggctg gaggtctcct accggtcggc gtgggggcgg
     2281 gtgttgtccc tcgagcaggc gatcggacag ccggtcgtcg agaagaccaa ggggcatggt
     2341 tcggtgctga caccgttcgg ggaggagttg cggcgggcgc tcgaggcgcc actcaacaa
//
LOCUS       DATAIQ010000693         2408 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_339034, whole genome shotgun sequence.
ACCESSION   DATAIQ010000693 DATAIQ010000000
VERSION     DATAIQ010000693.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2408)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2408)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2408
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_339034"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(290..>2408)
                     /gene="fdhF"
                     /locus_tag="VHN20_11500"
     CDS             complement(290..>2408)
                     /gene="fdhF"
                     /locus_tag="VHN20_11500"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015931687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009326 - formate dehydrogenase complex
                     [Evidence IEA];
                     GO_function: GO:0008863 - formate dehydrogenase (NAD+)
                     activity [Evidence IEA];
                     GO_process: GO:0015942 - formate metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="formate dehydrogenase subunit alpha"
                     /protein_id="HEX2726436.1"
                     /translation="YTNHPERSVDSVCPYCGVGCQLTYEIKDDRIVAVEGRDGPSNQN
                     RLCVKGRFGFDYVHHADRLTKPMIRKDGVSKHDTDIDPANPWTHFREATWDEALARAA
                     GGLKSIRDQHGGGALAGFGSAKGSNEEAYLFQKLVRAGFRTNNVDHCTRLCHASSVAG
                     LLEGIGSGAVTAPFMAAENADVIVVIGANPVENHPVAATFFKNAAESGAKLVVMDPRG
                     QALKRHATYMLQFKPGRDVAMLNAMLHTIVEEQLYDRQYVQANTDDFEKLVENVRDYA
                     PEKMAEICGIPADKLREVARLYARAEAAIIFWGMGVSQHIHGTDNTRCLIALALSTGQ
                     IGRPGTGLHPLRGQNNVQGASDAGLIPMFFPDYKSVEDPEVRGFYEELWGTKLDPKRG
                     LTVVEIMDAVHADQIRGMYIMGENPAMSDPDVQHAREALARLEHLVVQDIFLTETAKY
                     ADVILPASAWPEKNGTVSNTNRQVQMGRKALPLPGEAREDWAIIVDMAKGLGLDWAYT
                     HPRDVYAEMMQAMPSLANITWDRLARESSVTYPCDAPDQPGHDIVFGDGFPTKSGRGR
                     FVPAAIVPPAEEPDAEFPFVLTTGRQLEHWHTGSMTRRASVLDDLEPEAVAYVSSADL
                     RRLGLNAGDAVRVTTRRGSIALKARVDGAMPTGLIFIPFAYAEAAANVLTNPQLDPFG
                     KIPEFKFCAARLEPASAEAVPAE"
BASE COUNT          344 a          791 c          877 g          396 t
ORIGIN      
        1 cgagatcacg ccggcgccga tgagcgccag cgccagccac aggaggtcga gggtgagggg
       61 caaggggggg gctcattccc ctccccctta cggggagggg gtaggggggg ggggtcgtcg
      121 gcgtcgagcg ccgacataag cgaaccaggc gagtcggtgg agcagttatg agacgctggt
      181 atcagcgttc caggcaagcg caagacggaa gcgcttccac tttgcgaccc ccacccgggt
      241 cgggcgctga cgcgcccgct ccacccgccc cgcaaggggg agggtagagt tactccgccg
      301 gcacggcctc cgccgacgcc ggctccaggc gcgcggcgca gaacttgaat tcggggatct
      361 tgccgaacgg gtcgagctgc gggttggtga gcacgttggc ggcggcctcg gcgtaggcga
      421 acgggatgaa gatcaggccc gtcggcatgg cgccgtcgac gcgcgccttg agggcgatcg
      481 agccgcgccg cgtcgtcacg cgcaccgcgt cgccggcgtt gaggccgagg cggcgcaggt
      541 cggccgacga cacgtaggcg acggcctccg gctcgaggtc gtcgagcacg ctggcgcggc
      601 gcgtcatcga gcccgtgtgc cagtgctcga gctggcgccc ggtggtcagc acgaacggga
      661 actcggcgtc gggctcctcg gcgggcggca cgatcgccgc cggcacgaag cggccgcgac
      721 cgctcttcgt cgggaagccg tcgccgaaga cgatgtcgtg gccgggctgg tcgggcgcgt
      781 cgcacggata cgtcaccgag ctctcgcggg cgaggcggtc ccacgtgatg ttggccagcg
      841 acggcatcgc ctgcatcatc tcggcataga cgtcgcgcgg atgcgtgtac gcccagtcca
      901 gcccgagccc tttcgccatg tcgacgatga tggcccagtc ctcgcgcgcc tcgccgggca
      961 gcggcagcgc cttgcggccc atctgcacct ggcggttggt gttcgacacg gtgccgttct
     1021 tctcgggcca cgccgaggca ggcaggatca cgtccgcgta tttcgcggtc tcggtcagga
     1081 agatgtcctg cacgacgagg tgctcgagcc tggcgagcgc ctcgcgcgcg tgctgcacgt
     1141 ccgggtcgga catggccggg ttctcgccca tgatatacat gccgcggatc tggtcggcat
     1201 gcacggcgtc catgatctcg accaccgtga ggccgcgctt gggatcgagc ttggtgcccc
     1261 acagctcctc gtagaagccg cgcacctcag gatcctcgac cgacttgtag tcggggaaga
     1321 acatcgggat caggccggcg tcggaggcgc cctgcacgtt gttctggccg cgcagcggat
     1381 gcagcccggt gccggggcgg ccgatctggc cggtcgacaa tgccagcgcg atcaggcagc
     1441 gcgtgttgtc ggtaccgtgg atgtgctggc tgacgcccat gccccagaag atgatcgccg
     1501 cctcggcgcg cgcgtagagc cgcgccacct cgcgcagctt gtcggccggg atgccgcaga
     1561 tctcggccat cttctccggc gcgtagtcgc ggacgttctc gacgagcttc tcgaaatcgt
     1621 ccgtgttggc ctgcacgtat tggcggtcgt agagctgctc ctcgacgatc gtgtgcagca
     1681 tggcgttgag catcgccacg tcgcggcccg gcttgaactg cagcatgtac gtggcgtggc
     1741 gcttcagcgc ctggccgcgc gggtccatga cgacgagctt ggcgccgctt tcggccgcgt
     1801 tcttgaagaa ggtcgcggcg accggatgat tctcgaccgg gttggcgccg atgacgacga
     1861 tcacgtcggc gttctcggcg gccatgaacg gcgccgtcac cgcgcccgag ccgatgcctt
     1921 cgagcaggcc ggccaccgac gaggcgtggc acaggcgcgt gcagtggtcg acgttgttgg
     1981 tgcggaagcc ggcgcgcacg agcttctgga aaaggtaggc ctcttcgttc gagcccttgg
     2041 ccgagccgaa gccggccagc gcgccgccac cgtgctggtc gcggatgctc ttcagcccgc
     2101 ccgccgcgcg cgccagcgcc tcgtcccatg tcgcctcgcg gaaatgcgtc cacggattgg
     2161 cgggatcgat gtcggtgtcg tgcttggaga cgccgtcctt gcggatcatc ggcttcgtca
     2221 ggcggtcggc atggtgcacg tagtcgaagc cgaagcggcc cttcacgcac aggcggttct
     2281 ggttcgaggg gccgtcgcgg ccctcgaccg cgacgatgcg gtcgtccttg atctcgtagg
     2341 tgagctggca gccgacgccg caatacgggc acacgctgtc gacgctgcgc tcgggatgat
     2401 tggtgtag
//
LOCUS       DATAIQ010000694         2034 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_405727, whole genome shotgun sequence.
ACCESSION   DATAIQ010000694 DATAIQ010000000
VERSION     DATAIQ010000694.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2034)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2034)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2034
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_405727"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..513
                     /locus_tag="VHN20_11505"
     CDS             <1..513
                     /locus_tag="VHN20_11505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726437.1"
                     /translation="CVIGAILAFRPWKEGAFAKLAAPSRRALMLLAAITYVSFVPTLG
                     AALSDDVDRGELPWWGDSIGLPLFSFAFVILVTLPMLLAVVWFGIRRAQLPASLWGFD
                     RARPIASLAATLILGGLALGIAYTIAREVIVGSPYAIPPLLCSAYVVLCVRAALLAPR
                     VASAPVTGTE"
     gene            587..1537
                     /locus_tag="VHN20_11510"
     CDS             587..1537
                     /locus_tag="VHN20_11510"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEX2726438.1"
                     /translation="MSGLAGRLRRGAIAGFRVLPPRWRERLKRAAGALGHQPNWAQRL
                     RAQQLAEGAKRLDKWAPNLAAMLQTAGVRSLDGRACLEFGSGHLLTEPLLYHLLGARR
                     AVAVDYFPILEENLVRSVCVDVDEDALVGALQPFAPADRIRGRYRALLAREDWSLSGL
                     AELGLSYVAPYDAARSPLEPAAFDLIVSCSVLEHVPVADAPRILANLAAMLRPGGVMV
                     HAIHLEDHRDFHNAPLAFLAADTDWSEADADRRGNRLRQSDWMAMAKDLDGVDVIAAE
                     ARMAATDLPARLDPRLAAYARDDLRVGGLVIALRKQGAPA"
     gene            1540..2016
                     /gene="ybgC"
                     /locus_tag="VHN20_11515"
     CDS             1540..2016
                     /gene="ybgC"
                     /locus_tag="VHN20_11515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012317753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system-associated acyl-CoA thioesterase"
                     /protein_id="HEX2726439.1"
                     /translation="MSEEPKNPAPLDSWPSLSGHVEDGAHRLPVRVYYEDTDFSGLVY
                     HASYLRFMERGRTDSLRLAGADQSALHAEGDLVFAVRRMTIDFLKPARMDDVLVIETR
                     TEEVRGATILIRQRVVRGADVLVTADVTVACIGGGRPRRIPDALREQLAPRGPAPG"
BASE COUNT          256 a          737 c          695 g          346 t
ORIGIN      
        1 tgtgtgattg gagcgatcct tgccttccga ccctggaagg aaggcgcttt tgcgaagctg
       61 gctgcgccct cgcgccgcgc tctcatgctg cttgctgcca ttacctatgt ttcgttcgtg
      121 ccgacgctcg gggcagcgct ctccgacgat gtcgaccgag gcgaattgcc gtggtggggc
      181 gattcgatcg gcctgccgct gttcagcttc gcattcgtga tcctggtcac cctccccatg
      241 cttcttgcgg tggtgtggtt cggcattcgg cgcgcgcagc tgcctgcgag cttgtggggc
      301 ttcgacagag cccgtccgat cgcgagcttg gctgcgacgc tcattctggg cggcttggct
      361 ctcggtatcg cgtacacgat cgctcgcgag gtgatcgtgg gctcgcccta cgccattccg
      421 cccttgctat gctccgccta tgtcgtgctt tgcgtgcggg ccgccttgct tgcgccgagg
      481 gtggcttcgg ccccggtcac aggaaccgaa tgatggtgga ttctttcgca aagccctccc
      541 gccgggtctc gggcgcgcca gtgacggaaa tgagcgagga cggtccgtga gcggcctcgc
      601 gggccggctc cggcgcggcg cgatcgccgg gttccgggtc ctgccgccgc gctggcgcga
      661 gcgcctcaag cgcgccgccg gcgcgctcgg ccaccagccg aactgggcgc agcggctgcg
      721 cgcgcagcag ctcgccgaag gcgccaagcg cctggacaag tgggcgccga acctcgccgc
      781 catgctgcag acggcgggcg tgcgcagcct ggatggccgc gcctgcctcg aattcgggtc
      841 cgggcacctg ctgaccgagc cgctgctcta tcacctgctc ggggcgcgcc gggcggtcgc
      901 ggtcgactat ttcccgatcc tcgaggagaa cctcgtccgc agcgtgtgcg tggacgtcga
      961 cgaagacgcg ctcgtgggcg cgctgcagcc gttcgcgccg gccgaccgca tccgcgggcg
     1021 ctaccgggcg cttctcgccc gcgaggactg gtccttgagc gggctggcgg agctagggct
     1081 cagctatgtc gcgccctacg atgccgccag gagcccgctc gagcccgcgg cgttcgacct
     1141 gatcgtctcc tgctcggtgc tggagcacgt gcccgttgcc gacgcgccgc gcatcctcgc
     1201 caatctcgcg gccatgctca gacccggcgg cgtcatggtg cacgccatcc acctcgagga
     1261 ccatcgcgac ttccacaacg ccccgcttgc cttcctggcg gcggacaccg attggagcga
     1321 agccgacgcc gaccggcgcg gcaaccgcct gcggcagtcg gactggatgg ccatggccaa
     1381 ggacctcgac ggagtggacg tgatcgccgc ggaggcgcgc atggcggcga cggacctgcc
     1441 ggcccgcctc gatccgcgcc ttgccgctta cgcccgcgac gatctgcgcg tcggcggcct
     1501 cgtgatcgcg cttcgcaaac agggtgcacc cgcgtgacga tgagtgaaga gcccaagaat
     1561 cccgctcccc tcgactcctg gccctccttg tccggccatg tcgaggacgg cgcccaccgc
     1621 ctgccggtgc gcgtctatta cgaggacacc gacttctccg gcctcgtcta ccacgccagc
     1681 tacctgcgct tcatggagcg cgggcgcacc gactcgttgc gcctcgccgg ggccgaccag
     1741 tcggcgctgc acgccgaagg cgacctcgtc ttcgcggtgc ggcgcatgac catcgatttc
     1801 ctgaaaccgg cgcgcatgga cgacgtgctc gtcatcgaga cccgcaccga ggaggtgcgc
     1861 ggggcgacca tcctgatccg gcagcgggtg gttcgcggcg ccgacgtgct ggtcaccgcc
     1921 gacgtgaccg tcgcctgcat cggcggcggc cggccgcggc gaatccccga cgcgctgcgc
     1981 gagcagctgg cgccccgtgg tccggccccg ggctgattca ggcccacgcg ccgc
//
LOCUS       DATAIQ010000695         2543 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_155378, whole genome shotgun sequence.
ACCESSION   DATAIQ010000695 DATAIQ010000000
VERSION     DATAIQ010000695.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2543)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2543)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2543
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_155378"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            194..703
                     /gene="tsaA"
                     /locus_tag="VHN20_11520"
     CDS             194..703
                     /gene="tsaA"
                     /locus_tag="VHN20_11520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015932004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase
                     TrmO"
                     /protein_id="HEX2726440.1"
                     /translation="MSDEEFGEREGERAILLPDTFDAGVFFIGRIATPWRRRQDCPKN
                     GAESDAICTITLDARYSEGLKDLETASHVIVLYWMDRAPRNLVLQKPRHYGEARGVFA
                     LRSPARPNPIALSVAELVAVAGPELKVRGLDCLDGTPLLDLKPYFASTDARPAATVGW
                     HASGRQRDL"
     gene            complement(780..1955)
                     /locus_tag="VHN20_11525"
     CDS             complement(780..1955)
                     /locus_tag="VHN20_11525"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX2726441.1"
                     /translation="MNEAGASRPHPVQSSALPPPTGAIVTLDWLRARADAWDRLVAEA
                     AAPNPFYARRIVVAHVEHDLAGPDLRFVAVHRGDELLALLPFRPRGARLALFRRAAAG
                     WISPYVVTSTPLVTRHGSATAIDALLTTMATAGEGALWVLPLLALDSVVGAALQAAIV
                     ARQWPARTLSAFDRPVFDAHDAGAYAAHLGAGRRKDLQRRRRRLAERGSVEMHSFTDG
                     AALSQAVDEFLTLEQKGWKGAAGTALACRENTAAYLRAVFADGAGPVACRADVLRLDG
                     RPIAMSLAFVSGGTAYMFKTAYDETLRRYAPGVLLEDEIVRACQSGFAERLDSATMPG
                     GVMDSLYPHRQRMGDLLFATDAAFGSERFAALAERETTCRRAIARLKTLYRRGHSAT"
     gene            complement(1952..>2543)
                     /locus_tag="VHN20_11530"
     CDS             complement(1952..>2543)
                     /locus_tag="VHN20_11530"
                     /inference="COORDINATES: protein motif:HMM:NF013703.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="polysaccharide biosynthesis C-terminal
                     domain-containing protein"
                     /protein_id="HEX2726442.1"
                     /translation="LTGFNFIDVLLLAFLLPPEAVGVYFAATRILQFVVFVSYAASAA
                     TAARFAEAKAHGDVAHLRALVLRTARLASAATFVVGVGVLLAAPILLRFFGPGFDASF
                     GALAILVAGTVLYSACGPAEDVLNMLGGERLCATIALSAFLAAVLLILVLVPPLGIIG
                     AAVAMASANVLRGAALATAARWRLGISTHILARADG"
BASE COUNT          451 a          884 c          882 g          326 t
ORIGIN      
        1 gtggccgccg catgaagggc ctcgagccgc tcgaccgctt gctcaggcgc ggcaatgggc
       61 tcgagaccat tgcgcgaaag atcattcaag gtcgtgcgtc cctttgcaca tcagagggcc
      121 tgtcttaaag catgaggccg cgaagtgcga atgacttcgc ggcaggccac cttcacccga
      181 acgggaaacg acgatgagcg acgaggagtt cggggagcgc gagggcgaac gcgcgatcct
      241 cctgccggac actttcgacg ccggcgtgtt cttcatcgga cgcatcgcga cgccgtggcg
      301 aaggcgccag gactgcccca agaacggcgc cgaatcggat gcgatctgca cgatcacgct
      361 cgacgcgcgc tacagcgaag gcctcaagga cctcgagacg gcctcgcacg tgatcgtgct
      421 ctactggatg gaccgggcgc cgcgcaatct ggtgctgcag aagccgcgcc attatggcga
      481 agcgcgcggc gtgttcgcgc tgcggtcgcc ggcgcggccg aatccgatcg cgctctccgt
      541 tgccgagctc gtcgccgtcg cagggccgga gctgaaggtg cgcgggctcg actgcctgga
      601 cgggacgccg ctcctcgacc tgaagccgta tttcgcctcg accgatgcca ggcccgcggc
      661 cacggtcggc tggcacgcct cgggccggca acgcgacttg tgagcaagtc gagatcagaa
      721 gcggtccgct ctttctaccc gtgggtcgca tgatcccgga tcatgcgcgg gcgtgatcat
      781 caggtggcgc tgtgaccgcg cctatacagc gtcttcagcc gggcgatcgc gcgccggcac
      841 gtcgtctccc gttccgccag ggccgcaaac cgttcagagc cgaaggccgc atccgtggcg
      901 aacagcaggt cgcccatgcg ctgccgatgc ggatagaggc tgtccatcac gccgcccggc
      961 atggtcgccg aatcgagacg ctcggcgaag cccgactggc aggcgcgcac gatctcgtcc
     1021 tcgagcagca cccccggcgc atagcggcgc aaggtctcgt cgtaggccgt cttgaacata
     1081 taggcggtgc cgcccgacac gaaggcgagg ctcatcgcga tcgggcggcc atcgagcctc
     1141 agcacgtcgg ctcggcaggc caccgggccg gcgccgtccg cgaacaccgc gcgaagatag
     1201 gcggccgtgt tctcacggca tgcaagcgcg gttccagccg cgcccttcca gcccttctgc
     1261 tcgagggtaa gaaactcgtc gacggcctgg ctcaaggcgg caccgtcggt gaaactatgc
     1321 atctcgaccg agccccgttc ggcgaggcgc cggcgccgac gctgcagatc cttgcgccgc
     1381 cccgcgccga gatgggcagc gtaagcgccc gcgtcatgcg catcgaagac ggggcggtcg
     1441 aacgccgaca gcgtgcgggc cggccattgc cgcgcgacaa tcgccgcctg gagcgcagcg
     1501 ccaacgacgc tatccagggc cagcagcggc aggacccaga gcgccccctc cccggccgtc
     1561 gccatcgtcg tcagcaaggc atcgatcgcc gtggccgagc cgtggcgcgt cacgagcggc
     1621 gtcgaggtca ctacgtaggg ggatatccac cccgcggcgg cgcgccggaa cagtgccagc
     1681 cgtgcaccgc gcggccgaaa cggcagaagc gcaagcaact cgtcgccgcg atgcacggcg
     1741 acgaaccgca ggtcgggccc ggcgagatca tgctccacat gcgccacgac gatgcggcgc
     1801 gcatagaatg ggttgggggc ggcggcctca gcgacgagac ggtcccacgc gtcggcgcgt
     1861 gcgcgcagcc agtccagcgt gacgatggcg ccagtcgggg gcggtagcgc ggacgactgg
     1921 acgggatgcg gccgcgatgc acccgcctcg ttcatccgtc ggcccgcgcc aggatatgcg
     1981 tcgatatgcc tagacgccac cgcgccgccg tcgcaagcgc ggcgccgcgc agcacgttgg
     2041 cgctcgccat ggcgaccgcg gcgccaatga tccccagagg cggcacgagg acgaggatga
     2101 gcagcaccgc cgccaagaag gccgatagag cgatcgtggc gcacaggcgc tcgccgccca
     2161 gcatgttgag aacgtcctcg gccggcccgc acgcgctgta gagcaccgtt ccggcgacga
     2221 ggatcgcaag ggccccgaag ctggcgtcga atcccggccc gaagaagcgc aacagaatcg
     2281 gcgcggcgag caggacgccg acgccgacga caaacgtcgc ggcgcttgcg agacgcgcgg
     2341 tgcgcagcac gagcgcgcgc aaatgcgcga cgtcgccgtg cgccttggcc tcggcgaagc
     2401 gcgccgccgt cgccgccgaa gccgcatagg agacgaacac cacgaactgc aggatccgcg
     2461 tcgccgcgaa atagacgccg actgcctcgg gcggcagcag gaaggcgagc agcaggacgt
     2521 cgatgaagtt gaagcccgtc agc
//
LOCUS       DATAIQ010000696         3387 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_405783, whole genome shotgun sequence.
ACCESSION   DATAIQ010000696 DATAIQ010000000
VERSION     DATAIQ010000696.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3387)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3387)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3387
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_405783"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..346)
                     /locus_tag="VHN20_11535"
     CDS             complement(<1..346)
                     /locus_tag="VHN20_11535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018043723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucan biosynthesis glucosyltransferase H"
                     /protein_id="HEX2726443.1"
                     /translation="MALPLDALKPAQAPITVPWQPEPAVPPENQLVMPVQSFTEWPRG
                     AERAATMPRADRGVWLTRLAVFGGALLLTAYGAWEMYQVVSVSRTTVLQWVLLVLFTI
                     NFSWIALAFTSAL"
     gene            complement(322..1896)
                     /locus_tag="VHN20_11540"
     CDS             complement(322..1896)
                     /locus_tag="VHN20_11540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014890186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucan biosynthesis protein"
                     /protein_id="HEX2726444.1"
                     /translation="MPVDPDNKKIRGCAKPSRRDVLTAIGGAAASLPLLPNGGVAQSL
                     QALIQTAAGDGQRFDAGAVAELARTLARKPFAAPPSDLPDPFAGLNYEHYVGIKPAPG
                     ARVWAGEGRGFVAEPLHRGFVFSNAVTLFTIEDGVVRRLAYDRSRFDFGKLNVPANLP
                     DIGFSGVRLYSTAGDSQPLEFALIQGATFFRALARGQNFGAVARALTLKPAETRGEEF
                     PMFRALWLERPGPGGNALVVHGLMDSESVAGAVRMTFRAGDMTIVDVETSLFPRVNLD
                     HVGLGGINATYLFGGNDRRNVDDVRPSVHEVSGVQILTGRGEWVWRPLNNPETLQISM
                     FIDQNPRGFGLLQRDRDYSTFQDDEQRFERRPSVWIEPIGEWGPGAVQLIEIPSDSEI
                     NDNILAYWRPRTPMAAGSEVLLAYRQFWCWTPPDRPPLATVAGTRIGRGSNGRRRRFV
                     IDFAGEGPIADLKPNLTASPGTIQGLRVWTYVERKTIRVAFELDPGNENASELRLILE
                     AAGKPISETWLYRWTP"
     gene            2116..>3387
                     /gene="glmU"
                     /locus_tag="VHN20_11545"
     CDS             2116..>3387
                     /gene="glmU"
                     /locus_tag="VHN20_11545"
                     /EC_number="2.7.7.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012335205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003977 - UDP-N-acetylglucosamine
                     diphosphorylase activity [Evidence IEA];
                     GO_function: GO:0019134 - glucosamine-1-phosphate
                     N-acetyltransferase activity [Evidence IEA];
                     GO_process: GO:0000902 - cell morphogenesis [Evidence
                     IEA];
                     GO_process: GO:0006048 - UDP-N-acetylglucosamine
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HEX2726445.1"
                     /translation="MTTVPSQARGPAQRSCLAVILAAGEGTRMRSARPKALHELAGRS
                     MLGHVLAAVREAGATRVAVVVGPDRDDVAAEAHRVIADAAIFVQRDRLGTAHAVLAAR
                     DALKSPIDDVIVAYADTPLIETETLAKLRKPLADGAAVAVLGFEARDPTGYGRLIMNG
                     SRLAAITEHRDATDAEREIRFCNAGLMALQGNVVLDVLDRIGNQNSKGEYYLTDAVSI
                     ANALGRMVVAIEAPEEEVQGINDRAQLAAAERVLQARLRQAAMANGATLVDPDTVFLS
                     FDTKIGRDVVIEPHVFFGRGVSVEDNVVLHGFSHIEGAHLGKGVSIGPFARLRPGADL
                     GPNVKVGNFVEIKNVQLAAGVKVNHLTYLGDATVGANANIGAGTITCNYDGFAKHRTT
                     IGEGAFIGTNSSLVAPLTIGANAYIGSGSVIT"
BASE COUNT          562 a         1123 c         1183 g          519 t
ORIGIN      
        1 gaagcgcgct cgtgaaggcg agagcgatcc aggaaaagtt gatcgtgaaa aggacgagca
       61 acacccactg caggacggtg gtgcggctga ccgacacgac ctggtacatc tcccaggcgc
      121 cgtaggccgt cagcaggagg gcgccgccga acacggcaag ccgcgtcagc cacacgcccc
      181 ggtcggcgcg cggcatggtg gcggcccgct ccgcgcctcg cggccattcc gtgaaggact
      241 ggaccggcat gacgagctgg ttctccggcg gaaccgccgg ctcgggctgc cacggcaccg
      301 tgatcggcgc ttgggcgggt ttcagggcgt ccaacggtaa agccatgtct cagagatcgg
      361 ttttccggca gcctcaagaa tgaggcgcag ctcggaagca ttctcgttgc cgggatcaag
      421 ctcgaacgcg acccggatgg tctttcgctc gacgtaggtc caaacgcgca acccctgaat
      481 ggttccgggg cttgccgtca agttgggctt gaggtccgcg atcgggccct cgccggcgaa
      541 gtcgatgacg aagcggcggc ggcggccgtt cgagccgcgc ccgatccggg tcccggcgac
      601 ggtggcgagg ggcgggcggt cgggcggcgt ccagcaccag aactgccgat aggccagaag
      661 cacttcggac cccgccgcca tgggtgtgcg cgggcgccaa taggcgagga tgttgtcgtt
      721 gatctcggaa tcgctcggaa tctcgatcag ctggacggcg ccgggccccc actcgccgat
      781 cggctcgatc cacacgctcg ggcggcgctc gaaacgctgc tcgtcgtcct ggaacgtgct
      841 gtagtcgcgg tcgcgctgca gcaggccgaa gccgcgcggg ttctggtcga tgaacatcga
      901 gatctgcaac gtctccggat tgttcagggg acgccacacc cactcgccgc ggcccgtcag
      961 gatctgcacg cccgagacct cgtgcaccga gggcctgaca tcgtcgacgt tgcgccggtc
     1021 gttgccgccg aagagatagg tcgcgttgat gccgccgaga ccgacatggt cgagattgac
     1081 gcgcgggaaa aggctggtct cgacgtcgac gatggtcatg tcgccggcgc ggaaggtcat
     1141 gcgcacggcg ccggccacgg attccgagtc catcagcccg tgcacgacca gggcgttgcc
     1201 gcccggcccc ggccgctcca gccacagggc gcggaacatc ggaaattcct cgccgcgggt
     1261 ctcggccggc ttgagggtca gggcgcgcgc cactgcgccg aaattctggc cgcgggcaag
     1321 ggcgcggaaa aacgtcgcgc cctggatcag tgcgaattcc agcggctgac tgtccccggc
     1381 ggtcgagtag agccgcacgc ccgagaagcc gatatccggc aggttggcgg gcacgttcag
     1441 cttgccgaag tcgaagcggc tgcggtcgta ggcgagccgg cggacgacac catcctcgat
     1501 ggtgaacagg gtgacggcgt tggagaacac gaagccgcga tgcaggggct cggcgacgaa
     1561 gccgcggccc tccccggccc agacccgcgc ccccggcgcc ggcttgatgc cgacataatg
     1621 ttcgtaattg aggcccgcga agggatccgg gaggtcgctg ggcggcgccg cgaacggctt
     1681 gcgcgccagg gtgcgcgcga gctcggcgac cgcacccgcg tcgaagcgct gcccatcgcc
     1741 cgcggcggtc tggatcagcg cctgcaggct ttgcgcgaca ccgccgttcg gaagcagcgg
     1801 caggcttgcc gcagctccgc cgatcgcggt gaggacatcc cgtcggctgg gcttggcgca
     1861 gcctcgtatc ttcttgttat ccgggtcgac cggcacgtgt ttactctact tgcgcttggg
     1921 agaggggccg gcgggtttcg gcgacggcgc ccgttcctta gcataacagc gaggccatgc
     1981 gggaggtgtt tcgttcgggg taaccaagcc tgcaaccatc ggtgcgatta atggtgaatg
     2041 ctgataaggc ggtttgcgcg atggcgccgt cttggatagc agcgacgcac gatcgccctg
     2101 gacacgagaa ccgtcatgac caccgtcccc agccaagccc gcggcccggc gcagaggagc
     2161 tgccttgccg tcatcctggc ggccggcgag gggacgcgca tgcgctcggc gcgcccgaag
     2221 gcgctgcacg agctggccgg gcgctcgatg ctgggccatg tgctcgccgc cgtgcgcgag
     2281 gccggcgcca cgcgcgtcgc cgtcgtggtc ggcccggatc gcgacgacgt cgccgcggag
     2341 gcgcaccggg tcatcgccga tgccgccatc ttcgtgcaga gggaccggct cggcaccgcc
     2401 catgccgtcc ttgccgcccg tgacgcgctg aagtcgccga tcgatgacgt gatcgtcgct
     2461 tatgcggaca ctcccctgat cgaaaccgaa accctggcga agctgcgcaa gccgctggcc
     2521 gacggcgcgg cggtggccgt cctcggcttc gaagcccgtg acccgacggg ttatgggcgg
     2581 ctgattatga acggaagccg gctggcggcg atcacggagc accgcgacgc cacggacgcc
     2641 gagcgcgaga tccggttctg caatgccggc ctgatggccc tccaggggaa cgtggttctc
     2701 gacgtgctcg accgcatcgg caaccagaac agcaagggcg agtattacct gaccgacgcc
     2761 gtgtcgatcg ccaacgccct gggccggatg gtggtcgcca ttgaggcgcc cgaggaggag
     2821 gtccagggca tcaacgaccg ggcgcagctc gccgcggccg aacgcgtcct gcaggcgcgg
     2881 ctgcggcagg ccgcgatggc gaacggcgcc acgctggtgg accccgatac cgtgttcctc
     2941 agcttcgaca ccaagatcgg ccgcgacgtc gtgatcgagc cgcatgtgtt tttcggccgc
     3001 ggcgtgagcg tcgaggacaa tgtcgtgctc catggctttt cgcacatcga gggcgcccac
     3061 ctcggcaaag gcgtgagcat cgggccgttc gcccgtctcc gccccggagc cgaccttggc
     3121 ccgaacgtca aggttggcaa ttttgtcgag atcaagaacg tgcagctggc ggccggcgtt
     3181 aaggtgaatc acctgaccta tctcggcgac gcgacggtcg gcgccaacgc caatatcggc
     3241 gccggcacca tcacctgcaa ttacgacggg ttcgccaagc accgcacgac catcggggaa
     3301 ggggccttca tcggcaccaa cagctcgctg gtggcgccgc tcacgatcgg tgccaacgcc
     3361 tatatcggct caggctcggt catcacc
//
LOCUS       DATAIQ010000697         6318 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_36095, whole genome shotgun sequence.
ACCESSION   DATAIQ010000697 DATAIQ010000000
VERSION     DATAIQ010000697.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 6318)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6318)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6318
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36095"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(182..1015)
                     /locus_tag="VHN20_11550"
     CDS             complement(182..1015)
                     /locus_tag="VHN20_11550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008133244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HEX2726446.1"
                     /translation="MRRSHIFGAILIATPLLLTAGPSLQAWAANRGDAARPAAKPDRS
                     GCSRAQFRVVLDVGHSKEVPGAKSARGVPEFDFNLSLAQRIEKSLTGAGFKQTLLLVT
                     PGPARAGLFKRVARANALPADLFISVHHDSVPEWFLDVWTHGGKEHGYSDRFAGHSLF
                     ISYENGQAEASFRFAQLLGKQLKASGLRYTPHYTLPAMDWRRRDLLDVEAGVYRYDQL
                     VVLRETKVPAVLLEAGSIVNRNEEVLMSTPERQTAIAGAVTKAVEQFCAARASAQLPK
                     S"
     gene            complement(1019..1840)
                     /locus_tag="VHN20_11555"
     CDS             complement(1019..1840)
                     /locus_tag="VHN20_11555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003602928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00282 family metallophosphoesterase"
                     /protein_id="HEX2726447.1"
                     /translation="MRLLFLGDIVGRPGRTAVMERLPALRERWRLDCVVINGENAAGG
                     FGITEAICDDILAAGADVITLGNHAFDQREALVFIERQPRLVRPANYPPGTPGRGATV
                     VETHSGARVLVVNIMGRLFMDPLDDPFTAIDRELEACPLGQAADAVLVDFHAEATSEK
                     QAFGYYVDGRVSVVVGTHTHAPTADHRILPGGTAFQSDAGMCGDYESILGMQKDEPIR
                     RFLQKTPGSRLESSTGEGALAGLAVETDNKTGLATRIAAVRIGPHLDESWPRFWE"
     gene            complement(2041..2619)
                     /locus_tag="VHN20_11560"
     CDS             complement(2041..2619)
                     /locus_tag="VHN20_11560"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030272 - 5-formyltetrahydrofolate
                     cyclo-ligase activity [Evidence IEA];
                     GO_process: GO:0006730 - one-carbon metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HEX2726448.1"
                     /translation="MTESPPAEIKDRLRQEVFARRNGLDREWRRQACRAIAAHALALP
                     ELGNVQPVGGYWPIRSEVDPRPILRGLVKRGQTVALSQIMHPRLSWREWRPGDVLVKG
                     GFGVREPGPDAPECFPRALLVPLAAFDRAGHRIGYGKGHFDRSIATLSEMHPVVTIGL
                     AFSVQEVASVPAEDHDRRLDAIITEAEVIRGE"
     gene            complement(2633..2789)
                     /gene="ssrS"
                     /locus_tag="VHN20_11565"
     ncRNA           complement(2633..2789)
                     /ncRNA_class="other"
                     /gene="ssrS"
                     /locus_tag="VHN20_11565"
                     /product="6S RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00013"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00013"
     gene            complement(2839..3186)
                     /locus_tag="VHN20_11570"
     CDS             complement(2839..3186)
                     /locus_tag="VHN20_11570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapA"
                     /protein_id="HEX2726449.1"
                     /translation="MAEVTVSIAGRTYRMACNDGDEPHLAKLAALFDGKVEELRGTFG
                     QIGDMRLQVMAALMLADELSEAKERIEALEAQSRHAEATELRLAEAINSAAERIELLA
                     KSLNPPAPANPSP"
     gene            complement(3195..3491)
                     /locus_tag="VHN20_11575"
     CDS             complement(3195..3491)
                     /locus_tag="VHN20_11575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4164 domain-containing protein"
                     /protein_id="HEX2726450.1"
                     /translation="MAASLDNALTRLESALGLLEAAATRRLEAEHRRGDLETELQIMQ
                     DDRARLAVELDGTAARLHRVEAVTQDVSRRVQVAVGAIRDVLARAEPADEVEKA"
     gene            3751..5763
                     /gene="tkt"
                     /locus_tag="VHN20_11580"
     CDS             3751..5763
                     /gene="tkt"
                     /locus_tag="VHN20_11580"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004802 - transketolase activity [Evidence
                     IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HEX2726451.1"
                     /translation="MSVSEFVSPDRVSHSDLANAVRALAMDAVEQAKSGHPGLPMGAA
                     DIATVLFTKFLKYDAGDPAWPDRDRFVLSAGHGSMLLYALLHLTGVEGMSLDELKRFR
                     QLDSKTPGHPENFMTPGVETTTGPLGQGLASAVGMALAERILNAQFGDDLVDHHTYVL
                     ASDGDLMEGVSQEAAALAGHLKLNRLIVLFDDNGISIDGPLSLADSVDQVKRFESAGW
                     RALRVDGHDAKAISRAISRAKKSDRPTLIACRTTIGFGAPKKAGTSKAHGEPLGGDEL
                     AGAKAALNWAHGPFEVPDGILAAWKRAGRRGRREHRAWAERLQNAPEAQRTEFERRVR
                     GELPQGLAEALARHKQRLAAEPQTMATRKASELALEVITEIVPELVVGSADLTPSNNT
                     KTKNLAAIAPGAYGARYIHYGIREHGMAAAMNGLALHRGCRPAGATFLVFTDYARPAM
                     RIAALSSIPSIYVMTHDSIGLGEDGPTHQPVEHLAALRAMPNMRVFRPADAIETAECW
                     QLAIERRDGPTLLALTRQNLPQVRTGADDGNLCATGAYELSPASDGRAKATLFASGSE
                     VEIALGAQKLLTEKGMAARVVSVPSLELFLSQPDDVRRRIIGDAPVKVAVEAAVRWGW
                     DAVIGADGLFVGMTGFGASAPYKDLYRHFGITPEAVTERVLRTHNL"
     gene            5826..>6318
                     /locus_tag="VHN20_11585"
     CDS             5826..>6318
                     /locus_tag="VHN20_11585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003535991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glyceraldehyde 3-phosphate dehydrogenase
                     NAD-binding domain-containing protein"
                     /protein_id="HEX2726452.1"
                     /translation="MTVKVAINGFGRIGRNILRAIVESGRKDIEVVAVNDLGPVETNA
                     HLLRFDSVHGRFPSEVGVDGDSLVVNGRKIKVTAIKNPAELPHKDLGIDIAMECTGIF
                     TSKDKAKTHLDAGAKRVLVSAPADNADLTVVYGVNHDKLTKNHLVVSNASCTTNCLAP
                     IAKV"
BASE COUNT         1038 a         2163 c         2119 g          998 t
ORIGIN      
        1 cgccccttct tgtgcatgat attcttgacc tgcgaatgtc cggccatggt gtcccccgcg
       61 cgggacggaa ggtcgagcgg ccgctcgcac gtcccagctc gtcagcaagc gcgcgttata
      121 gcgcgtcata tccggaaata aagcaaggct gacaaggcgc ctcgcgcccg ccagctcttc
      181 gttaactctt gggcagctgg gcggatgcgc gcgcggcgca gaattgctcg acggccttgg
      241 tgacggcgcc cgcgatcgcc gtctgccgct cgggcgtgct catcagcacc tcttcgttgc
      301 gattgacgat cgagccggcc tcgagcagga ccgcgggcac tttcgtctcg cgcagcacga
      361 ccagctggtc gtagcggtag acgcccgctt cgacatcgag caggtcgcgc cgccgccagt
      421 ccatcgccgg cagcgtgtaa tgcggcgtgt agcgcaggcc actcgccttg agctgcttgc
      481 cgagaagctg ggcgaagcgg aagctcgcct cggcctggcc gttctcgtac gagatgaaca
      541 gcgaatggcc ggcgaacctg tcgctgtagc cgtgctcctt gcccccatgc gtccagacgt
      601 cgaggaacca ttccggcacg gagtcgtggt gcacggatat gaacagatcg gccggcaagg
      661 cattggcgcg cgccacccgc ttgaacaggc cggcccgtgc cggcccgggc gtgaccagca
      721 ggagcgtctg cttgaacccg gcgccggtca gggacttctc gatgcgttgc gcgaggctca
      781 ggttgaagtc gaattccggc acgccgcggg cgctctttgc gccgggcact tccttgctgt
      841 gcccgacgtc gagcacgacg cggaactggg cgcggctgca gccgctccgg tccggcttgg
      901 cagcaggccg cgcagcgtcg ccgcggtttg ccgcccaagc ctgtagcgac gggccggccg
      961 tcagcagcag cggcgtggca atgaggatgg cgccgaaaat gtgcgagcgt cgcatcgcct
     1021 actcccagaa ccgcggccag gattcgtcga gatgcggacc gatgcgcacc gcggcgatgc
     1081 gcgtggcgag accggtcttg ttgtcggtct caacggccag gcctgccaat gcgccctccc
     1141 ccgtcgagga ttcgagccgc gagcccggcg tcttctgcag gaaacggcgg atcggctcat
     1201 ccttctgcat gcccaggata gactcataat ccccgcacat gccagcgtcc gactggaagg
     1261 cggtgccgcc cggcaggatc cggtggtcgg cggtcggggc gtgcgtgtgc gtgccgacga
     1321 cgacgctgac gcggccgtcg acatagtagc cgaaggcctg cttctcgctg gtcgcctcgg
     1381 catggaaatc gaccaggacg gcatcggcag cctggccgag cgggcatgcc tccagctcgc
     1441 ggtcgatggc cgtgaaagga tcgtcgagcg ggtccatgaa cagccggccc atgatgttga
     1501 cgacgaggac gcgcgccccg ctatgcgtct cgacgacggt cgcgccgcgt ccaggcgtgc
     1561 ccggcgggta gttggccggc cgcaccagcc gcggctggcg ttcgatgaag acgagcgcct
     1621 cgcgctggtc gaaggcgtgg ttgccgagcg tgatcacgtc cgcgccggca gccaggatgt
     1681 cgtcgcagat cgcctccgtg atgccgaagc cgccggccgc gttctcgcca ttgatcacca
     1741 cgcaatcgag ccgccagcgc tcgcgcaacg cgggcaggcg ctccatcacg gccgtgcggc
     1801 ccggccgccc gacgatgtcg ccaaggaaaa gcaggcgcat tcaacgttcc acgtagttgc
     1861 caggaggatt tgacgaatag cgaacagcga atagcgggta gcgactagca aggccagagc
     1921 atgatccggc gaagtagatt ccacttcgcc gaaaagatca tgcgactaaa tgagatctag
     1981 ggcgggatcg atccaatctg aattgatccc gctctaggcg cacgccctat cggccattcg
     2041 ctattcgccc cgaatgacct cggcttcggt gatgatcgca tcgagccggc ggtcgtgatc
     2101 ctcggccggc acgcttgcca cctcctgcac cgagaaggca aggccgatgg tgacgaccgg
     2161 gtgcatctcg gacaaggtgg cgatggagcg gtcgaaatga cccttgccgt agccgatccg
     2221 gtgcccggcg cggtcgaagg cggcgagcgg cacgagcagc gccctcggaa agcattccgg
     2281 cgcgtccgga cccggctcgc gcaccccgaa gccgcctttg acgaggacgt ccccggggcg
     2341 ccactcacgc cagctgaggc gcggatgcat gatctgggag agggccacgg tctggccgcg
     2401 cttcacgagg ccgcgcagga tcggccgcgg gtcgacctca ctgcggatcg gccagtagcc
     2461 gccgaccggc tgcacgttgc cgagttcggg aagggcgagc gcgtgcgcgg cgatggcgcg
     2521 gcaggcttgc cgccgccact cgcggtcgag gccgttgcgg cgcgcaaaga cctcctgccg
     2581 cagcctgtcc ttgatctcgg cgggcggtga ttcagtcatg cgggaaggaa agcgcggagc
     2641 cgcgaaaggc gttggagaat cgatcccggg aacctacaac gtaggtgggc gccgtatgtc
     2701 ccggtccagg gaccaggtca gggacagctc ccttgaggat cgataaggcc ccggggatat
     2761 gtgtctcctg acgcaccccg cagccccgcc ttgctaatgt agtgaggatc gtccccggat
     2821 gccagagtgc aatttctgtc acggtgaagg atttgccggg gccggcggat taaggctctt
     2881 tgcgagaagc tcgatgcgct cggccgcgct gttgatcgcc tcggcgaggc gaagctcggt
     2941 cgcctcggcg tgccgggact gggcctcgag cgcctcgatg cgttcctttg cctccgagag
     3001 ctcgtcggcc agcatgaggg ccgccatgac ctgcaggcgc atgtcgccga tctggccgaa
     3061 cgtgccgcgc agctcctcca ccttgccgtc gaacagggcc gcgagcttcg ccagatgcgg
     3121 ctcgtccccg tcgttgcatg ccatgcggta ggtgcgcccg gcgatgctga ccgtcacttc
     3181 agccatgcgg acgcctacgc tttctcgacc tcgtcggccg gctcggcccg ggcgagcacg
     3241 tcgcggatgg cgccgacggc gacttgcacg cggcggctga cgtcctgcgt caccgcctcg
     3301 acgcggtgca ggcgcgccgc ggtgccgtcg agctcgaccg cgaggcgtgc acgatcatcc
     3361 tgcatgatct gcagctcggt ctcgagatcg ccgcggcgat gctcggcctc gagccggcgc
     3421 gtcgcagcgg cttccaggag cccgagcgcg gattcgagcc gcgtcaatgc gttatccagc
     3481 gaagctgcca tcctgcctcc gggaatcgcg gcaacactag acatgatccg gcgaagtggg
     3541 aaccgtgccg ccggaaagat catcgcaaca atggtggaca agagctttct ccgcttcaca
     3601 ccggtgagtg tgctgacgct tgcacggcgg gaccgcgggt cacgggcgcc gccggcatgt
     3661 gcgcggcggc gaacaattga ctcgcgagtc ccgcgtgcct aacaagccgg gcgctggcag
     3721 agccacgctt tcctgcccct tttctggatc atgtccgtgt ccgaattcgt ctcgcccgat
     3781 cgcgtgtccc attccgatct ggccaacgcc gtccgcgccc tggcgatgga cgcggtcgaa
     3841 caggccaagt ccgggcatcc ggggttgccg atgggcgccg ccgacatcgc cacggtgctg
     3901 ttcacgaaat ttctcaaata cgacgccggc gatccggcct ggcccgaccg cgaccgcttc
     3961 gtgctgtccg ccgggcacgg ctcgatgctg ctctatgcgc ttctgcatct gaccggcgtc
     4021 gaaggcatga gcctcgacga gctgaagcgc tttcgtcagc tcgactccaa gacgcccggc
     4081 catcccgaga acttcatgac gccgggtgtc gagaccacga ccgggccgct cggccaaggc
     4141 ctcgcgtcgg cggtcggcat ggccctggcc gagcgcattc tcaacgcgca attcggcgac
     4201 gacctggtcg atcaccacac ctatgtgctc gcctcggacg gcgatctgat ggagggcgtg
     4261 agccaggagg cggcggcgct ggccggccac ctcaagctga accgcctgat cgtcctgttc
     4321 gacgacaatg gcatctcgat cgacggtcct ctctcgctcg ccgattccgt cgatcaggtg
     4381 aagcgtttcg agtccgccgg ctggcgcgcg ctgcgcgtcg acggccacga cgccaaggcc
     4441 atcagccggg ccatctcgcg cgccaagaag tcagaccgcc cgaccctgat cgcctgcagg
     4501 accacgatcg gctttggcgc ccccaagaag gccggcacct cgaaggcgca cggcgagccg
     4561 ctgggcggcg acgagctggc cggcgccaag gccgcgctga actgggcgca cggcccgttc
     4621 gaggttcccg acggcatcct cgccgcctgg aaacgggcgg ggcggcgcgg ccgtcgcgag
     4681 catcgcgcat gggcggagcg gctccagaac gcgccggagg cccagcgcac cgaattcgag
     4741 cgccgcgtcc ggggcgagct tccgcaaggt cttgccgagg cgctcgcacg ccacaagcag
     4801 cgcctcgccg ccgagccgca gaccatggcg acgcgcaagg cgagcgaact ggccctcgag
     4861 gtgatcaccg agatcgtgcc tgagctcgtg gtcggctcgg cggatctcac cccgtccaac
     4921 aataccaaga ccaagaatct cgccgcgatc gcgccgggcg cttacggcgc ccgctacatc
     4981 cattacggca tccgggagca cggcatggcg gcggccatga acggcctggc gctgcatcgc
     5041 ggctgccggc cggccggcgc gaccttcctg gtgttcaccg attacgcgcg cccggccatg
     5101 cgcatcgccg cgctgtcgag catcccctcg atctacgtga tgacgcacga ttccatcggc
     5161 ctcggcgagg acgggccgac gcaccagccg gtcgagcatc tggcggcgtt gcgcgccatg
     5221 cccaacatgc gcgtgttccg gcccgccgac gccatcgaga cggcagagtg ctggcagctc
     5281 gcgatcgagc gccgcgacgg gccgaccctg ctggcgttga cccgccagaa cctgccgcag
     5341 gtgcgcaccg gcgcggacga cggcaatctc tgcgccaccg gcgcctatga gctctcgccg
     5401 gcctccgacg ggcgcgccaa ggcgaccttg ttcgcgtcgg gatccgaggt cgagatcgcc
     5461 ctcggcgcgc aaaaattgct caccgaaaag ggcatggcgg cgcgggtcgt ctcggtgccc
     5521 tcgctcgagc tgttcctgag ccagcccgac gacgtccggc gccgcatcat aggggacgcc
     5581 ccggtcaagg tcgccgtcga ggcggcggtc cgctggggct gggacgcggt gatcggcgcg
     5641 gacggcctgt tcgtgggcat gacgggattt ggcgccagcg ccccctacaa ggatctttac
     5701 cgtcatttcg gaatcacgcc ggaggcggtg accgagaggg tgctcaggac ccataatttg
     5761 tgacacaagg ccccgctttc gcccgcatgg cgcgttatcg gggcggtacg aaggagtgag
     5821 cggacatgac ggtcaaggtc gcgatcaacg gtttcgggcg catcgggcgc aacatcctgc
     5881 gcgccatcgt cgagagcggg cgcaaggaca tcgaggtcgt cgcggtcaat gatctcgggc
     5941 cggtcgagac caacgcgcac ctcctccgct tcgactccgt gcacggccgc tttccgagcg
     6001 aggtcggcgt cgacggcgac tccctcgttg tcaacggccg caagatcaag gtgacggcga
     6061 tcaagaatcc ggccgagctg ccgcataagg acctcggcat cgacatcgcc atggaatgca
     6121 ccggcatctt cacgtccaag gacaaggcca agacgcatct cgacgccggc gccaagcgcg
     6181 tcctcgtctc ggctcccgcc gacaacgccg acctgacagt cgtctacggg gtcaaccacg
     6241 acaagctcac caagaaccac ctcgtcgtct cgaacgcctc ctgcaccacc aactgcctgg
     6301 cgcctatcgc caaggtgc
//
LOCUS       DATAIQ010000698         3109 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_451520, whole genome shotgun sequence.
ACCESSION   DATAIQ010000698 DATAIQ010000000
VERSION     DATAIQ010000698.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3109)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3109)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3109
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_451520"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1246
                     /locus_tag="VHN20_11590"
     CDS             <1..1246
                     /locus_tag="VHN20_11590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HEX2726453.1"
                     /translation="GAMAALSRGFLRQSPDAVALRAWRSRFILGELLHGTTWGVIVQA
                     LMHVQAPGSRGFVLFILLMTAAVAAALSATIPLAVYAGVVPLTVAVLTFVWTSRDLDA
                     VMLAVMAISGQLFFVFLARRLHASALATLQSRAEKDVLFAELEQAKSNSDEARRRAEE
                     ANLAKSRFLATMSHELRTPLNAILGFSEVMKNEVFGPHASASYREYAEDIHDSGQHLL
                     NVINEILDLSRIEAGRYELNEEAVLLAHVVDDCRHMLNLRAKAKNQTVKDAIDPTLPR
                     LWADERAVRQVVLNVLSNAIKFTPQGGEITIKVGRTSSGGQYVSIKDSGPGIPEDEIP
                     IVMSSFGRGSLAIKAAEQGSGLGLPIVKGFVELHGGAFQLKSKPREGTDAIVTFPASR
                     VMDVLPAVDVPPTSPRPGQEAA"
     gene            complement(1158..2285)
                     /gene="cobT"
                     /locus_tag="VHN20_11595"
     CDS             complement(1158..2285)
                     /gene="cobT"
                     /locus_tag="VHN20_11595"
                     /EC_number="2.4.2.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008939 -
                     nicotinate-nucleotide-dimethylbenzimidazole
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate-nucleotide--dimethylbenzimidazole
                     phosphoribosyltransferase"
                     /protein_id="HEX2726454.1"
                     /translation="MTEAPAGAVPFEDIRRLIAMMPGPDEAAVTAVRERNAALLKPAG
                     SLGRLEWVVEWLAAWQRKAPPAVERPLVCVFAANHGVAARGVSAYPPDASRKMLENFT
                     TGRAAIYQICASMSLGFKVFDLAIEMPTNDIVDAPAMDEKACVATMAFGMEAIAGGAD
                     LLALGEFGLGNTTIAAAIYAALYGGPAERWIEPETRADDGAVARKIAAVEVALARHRE
                     HLGDPLEVLRRLGGRDIAAMAGAILAARLQRIPVVLDGYVAGAAAAILHALNPAAIDH
                     CIAGHLAAEGAHQEVLERLGKIPLLALGLRLGEGTGAALAAGLVRTAAACHAGMGSHE
                     TGEAGPAEPPRPVTPLPDRGAARSAEHQPPEARPSRATQGR"
     gene            2464..2658
                     /locus_tag="VHN20_11600"
     CDS             2464..2658
                     /locus_tag="VHN20_11600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1289 domain-containing protein"
                     /protein_id="HEX2726455.1"
                     /translation="MTEISTPCIGICILDPDTGRCEGCGRTLEEVAGWLRMSEAERRR
                     IMAELDARPRRPSPSGDERA"
     gene            2662..>3109
                     /locus_tag="VHN20_11605"
     CDS             2662..>3109
                     /locus_tag="VHN20_11605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02281 family clan AA aspartic protease"
                     /protein_id="HEX2726456.1"
                     /translation="MSGAFGLALLLLGAAVLVFFHGDGVVAGLQAEEFASLIALGALL
                     LLVAGWVVQEFRGQWMRGVQAIVFWIVLGAGLVGAYSYRWEIREGASRVISDLAPGEP
                     AVGSGGEVTFARRMDGTFVVSGRANSRDLRFIFDTGASTVVLTADSA"
BASE COUNT          449 a         1100 c         1083 g          477 t
ORIGIN      
        1 cggcgccatg gcggccctgt cgcggggttt cctccggcag agccccgacg ccgtggcgct
       61 gcgcgcctgg cgcagccgct tcatcctcgg tgagttgctg cacggcacga cctggggcgt
      121 gatcgtgcag gccctcatgc acgtccaggc tcccggcagc cgcggcttcg tgctgttcat
      181 cctgctgatg acggcggccg tcgcggccgc cctgtcggcc accatcccgc tggcggtcta
      241 tgccggggtg gtgccgctga ccgtcgccgt tctcaccttc gtgtggacgt cacgcgacct
      301 cgatgcggtc atgctggcgg tgatggcgat cagcggccag ctcttcttcg tcttcctcgc
      361 ccgtcgcctt catgccagcg ccctcgccac cttgcagtcg cgcgcggaga aggacgtgct
      421 gttcgccgag ctggagcagg ccaagagcaa ttccgacgag gcgcggcgcc gggccgaaga
      481 ggcgaacctc gccaagtcgc gcttcctcgc cacgatgagc catgagctgc gcacgccgct
      541 caacgccatt ctcggcttct cggaggtgat gaagaacgag gttttcggcc cgcatgcctc
      601 ggcgtcctat cgcgaatacg ccgaggacat ccacgacagc ggccagcacc ttctcaacgt
      661 catcaacgag attctcgacc tctcccgcat cgaggccggc cgttacgagc tcaacgagga
      721 ggcggtcctc ctggcgcacg tggtcgacga ttgccgccac atgctgaacc tgcgcgccaa
      781 ggccaagaac cagaccgtca aggacgcgat cgatccgacg ctgccccggc tgtgggcgga
      841 cgagcgggca gtccggcagg tcgtgctcaa cgtcctgtcg aacgccatca agttcacgcc
      901 acagggcggc gagatcacga tcaaggtcgg gcggacgtcg tccggcggcc agtatgtgag
      961 catcaaggac agcgggccgg gcatccccga ggacgagatc ccgatcgtga tgtcatcctt
     1021 cggccgcggc tcgctggcca tcaaggccgc cgagcagggg tccgggctcg gcctgccgat
     1081 cgtcaagggc ttcgtcgagc ttcacggcgg cgccttccag ctcaagtcga agccgcgcga
     1141 gggcaccgac gcgatcgtca ccttccctgc gtcgcgcgtg atggacgtgc ttccggcggt
     1201 tgatgttccg ccgacctcgc cgcgccccgg tcaggaagcg gcgtaaccgg ccggggcggc
     1261 tccgcgggcc cggcttcgcc cgtctcgtgg cttcccatgc cggcatggca ggcggcggcg
     1321 gtgcgcacga gcccggccgc aagcgccgcc ccggtgccct ccccgaggcg caggccgagc
     1381 gcgagaagcg ggatcttgcc caaccgctcg agaacctcct ggtgcgcgcc ttcggcggca
     1441 agatgaccgg caatgcaatg atcgatggcg gcaggattga gcgcgtgcag gatcgccgcc
     1501 gcggctcccg ccacatagcc gtcgagcacc acgggaatgc gctgcaggcg ggccgccagg
     1561 atggcgcccg ccatggcggc gatgtcgcgc ccgccaaggc gccgcagcac ttccagcgga
     1621 tccccgagat gctcgcggtg gcgggcgagc gccacctcga cggcggcgat cttgcgcgcg
     1681 accgcgccgt cgtcggcccg ggtctccggc tcgatccagc gctcggcggg cccgccgtag
     1741 agcgccgcat agatcgccgc cgcgatggtc gtgttgccga gcccgaactc gccgagcgcg
     1801 agaaggtcgg cgccgccggc gatcgcctcc atgccgaagg ccatggtcgc cacgcacgcc
     1861 ttctcgtcca tggcgggcgc gtcgacgatg tcgttggtcg gcatctcgat ggccaggtca
     1921 aagaccttga agccgaggct catgctcgcg cagatctggt agatggccgc gcggccggtg
     1981 gtgaaattct cgagcatctt gcggctggcg tcgggcggat atgcggacac gccgcgcgcc
     2041 gcgacgccgt gattggcggc aaagacgcaa accagcgggc gctcaaccgc gggcggcgcc
     2101 ttccgctgcc aggccgcgag ccattcgacc acccattcga gccgccccag gctgccggcc
     2161 ggcttgagca gggccgcgtt acgctcgcgc acggcggtaa cggcagcctc gtccggaccg
     2221 ggcatcatcg caatcaggcg gcgaatatcc tcgaacggga ctgcgccagc cggtgcttcc
     2281 gtcatcatca cgctcctgaa gcccagccgc ttccctcgaa tcgcttaagg gccggcgccc
     2341 ctataacggg catcgtcatg cgggtgaagg cggtcgcatg ccgcgcagcc acgcgcaacg
     2401 agcggggcaa agggggtcgc atggggcgat gacgaactgc gccgcgcaac ctacattcca
     2461 agcgtgaccg agatctccac gccctgcatc ggcatctgca tcctcgaccc cgacaccggg
     2521 cgctgcgaag gctgcgggcg gacgctcgag gaggttgccg gctggctgcg catgagcgag
     2581 gccgagcgcc ggcgcatcat ggccgagctc gacgcgcgcc cgcggcggcc ctccccttcc
     2641 ggcgacgaga gggcgtgagc catgtccggc gcgttcggcc tggccctgct cctgctcggt
     2701 gcggcggtgc tcgtgttctt ccatggcgac ggtgtcgtgg cggggctcca ggccgaggag
     2761 ttcgcgtccc tgatcgcctt gggcgccctc ctgctcctgg tggcggggtg ggtggtccag
     2821 gagttccgcg ggcaatggat gcgcggcgtg caggccatcg tgttctggat cgtgctcggc
     2881 gccggcctcg tcggggccta cagctaccgc tgggagatcc gcgaaggcgc cagccgggtg
     2941 atcagcgatc tcgcgcccgg agagcccgcg gtgggcagcg gcggcgaggt gaccttcgcg
     3001 cgccggatgg acggcacctt cgtggtctcg ggccgggcga acagccgcga cctgcgcttc
     3061 atcttcgaca cgggcgccag cacggtggtg ctgaccgccg acagcgccc
//
LOCUS       DATAIQ010000699         1720 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_313542, whole genome shotgun sequence.
ACCESSION   DATAIQ010000699 DATAIQ010000000
VERSION     DATAIQ010000699.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1720)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1720)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1720
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_313542"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1392
                     /locus_tag="VHN20_11610"
     CDS             <1..1392
                     /locus_tag="VHN20_11610"
                     /EC_number="3.2.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019691833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008714 - AMP nucleosidase activity
                     [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA];
                     GO_process: GO:0044209 - AMP salvage [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AMP nucleosidase"
                     /protein_id="HEX2726457.1"
                     /translation="ATGALRDALERFFATGVPPTPAERLRFRYPELRLTYRPQGPIPA
                     IKRAYAKFEGPGTYATTVTHPLFFKDYLMEQLRPLVGDYGATMEVGVSTQEIPYPYVF
                     ERGDELARDGVSAADLARHFPTPLLSAVGDEVADGTWMEFQAEPRPLALFDAVRVDYS
                     LRRLVHYTGTDWRLVQPWILLTNYHRYVHQFVHWALRQLEEDGPFLSLVMPGGILIER
                     GDSDADLAARIAASPWHRFQMPAYHLLRRDGHGITLVNIGVGPSNAKNITDHLAVLRP
                     HCWLMVGHCGGLRQSQTIGDYVLAHGYLRRDRILDGLVPPNIPVPALAEVQVALQEAA
                     AQVTGERGDGLKRRLRTGTIVTYDDRNWELRWSQERRRINLSRAIAVDMESGTIAAQG
                     YRLRVPYGTLLCVSDKPLHGEIKLPGAANAFYERAVGEHLMIGLGALDILHGQLTSLH
                     SRKLRSFDEPPFR"
     gene            1416..>1720
                     /locus_tag="VHN20_11615"
     CDS             1416..>1720
                     /locus_tag="VHN20_11615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019403426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726458.1"
                     /translation="MSLTASIGEVISRFPQFRVAFVAAENLKLADARAPALDQLIAAR
                     EDETRRRWADRELSDIPGIAAWRAAYKGFGIKKTSYRSSVERLVKRIKAGDRLPTVNT
                     "
BASE COUNT          261 a          624 c          550 g          285 t
ORIGIN      
        1 gccaccggcg cgctgcgcga cgcgctcgag cgcttcttcg cgacgggggt gccgccgacg
       61 cccgcggaac ggctccgctt ccgctatccg gagctgcgcc tcacgtatcg gccgcagggg
      121 ccaatcccgg ccatcaagcg cgcctatgcc aagttcgagg gtcccggcac ctacgccacg
      181 acggtcacgc atcccctgtt cttcaaggac tacctgatgg agcagctgcg gccgctggtc
      241 ggagactatg gggcgacgat ggaggtcggc gtcagcacgc aggaaattcc ctatccctac
      301 gtgttcgagc gcggcgacga gctggcgcgc gacggcgtct cggcggcgga cctggcgcgc
      361 cacttcccga cgccgctcct gtcggccgtc ggcgacgaag tggcggacgg cacctggatg
      421 gagtttcagg ccgagccgcg gccgctggcc ctgttcgacg ccgtgcgcgt ggactattcc
      481 ctgcgccgcc tcgttcacta taccggcacc gattggcgcc tggtccagcc ctggatcctg
      541 ctcaccaatt atcaccgcta cgtccaccag ttcgtgcact gggcgttgcg ccagctcgag
      601 gaggacggcc ctttcctgtc gctcgtgatg ccgggaggga tcttgatcga gcgcggcgac
      661 agtgacgccg acctcgccgc ccgcatcgcc gcatcgccgt ggcaccgctt ccagatgcca
      721 gcctatcacc tgctgcgccg cgacgggcac ggcatcaccc tggtcaatat cggcgtcggg
      781 ccgtcgaacg ccaagaacat caccgaccat ctcgccgtgc tgcgcccgca ttgctggctc
      841 atggtcggcc attgcggtgg cctccgtcag tcgcagacca tcggcgatta cgtgctggcg
      901 cacggctacc tgcgccgtga ccgcatcctc gacggcctcg ttccgcccaa cattcccgtt
      961 ccggccctcg ccgaggtgca ggtcgcgctt caggaggcgg cggcgcaggt gacgggggag
     1021 cgcggcgacg gcctcaagcg gcggctgcgc acgggcacca tagtcactta cgacgaccgc
     1081 aactgggaac tgcgctggtc gcaggagcgg cggcgcatca acctgtcgcg cgccatcgcg
     1141 gtcgacatgg aatccgggac catcgcggcg caaggctacc ggctgcgcgt gccctacggc
     1201 accctgctct gcgtctccga caagccgctg cacggcgaga tcaagctgcc cggtgcggcc
     1261 aacgcgttct acgagcgcgc cgtcggcgag cacctgatga tcgggctcgg cgcactcgat
     1321 atcctgcacg ggcaactgac ctcgctgcat tcgcgcaagc tgcgcagctt cgacgagcca
     1381 cctttccgct gaccatccaa ccgccgcgtt atttcatgtc ccttacagca tccatcggcg
     1441 aggtgatctc gcgctttccg cagtttcgcg ttgccttcgt ggcggcggag aatctgaagc
     1501 ttgccgacgc gcgcgcgcca gctctcgacc agttgatcgc cgcgcgcgag gacgagacgc
     1561 gccgccgctg ggcggatcgc gagttgtcgg acatccccgg catcgccgcc tggcgcgcgg
     1621 cctacaaggg ttttggcatc aagaagacca gctaccgctc ctcggtggag cgcctcgtca
     1681 agcgcatcaa ggccggcgac cggctcccga ccgtcaacac
//
LOCUS       DATAIQ010000700         2424 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_405923, whole genome shotgun sequence.
ACCESSION   DATAIQ010000700 DATAIQ010000000
VERSION     DATAIQ010000700.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2424)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2424)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2424
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_405923"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..944
                     /locus_tag="VHN20_11620"
     CDS             <1..944
                     /locus_tag="VHN20_11620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018261035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Tim44 domain-containing protein"
                     /protein_id="HEX2726459.1"
                     /translation="ARPGRSGGSFGSRGGRTYDAPPATRTAPTPPAQPMQRSQAPQPG
                     PNMQRPAPVPQAQAAQPRRFGFGTGLFAGLLGAGLLGMLFGQGFFGGLAGLASMFGLL
                     LQVGLIVGLVWLAVRFFRRRQQPALAGAPGEPMERSSLGGMVPPIGGGRMGGLGGLGG
                     LGRSGPAPAQPRVPGRSDEVGIGPADYEAFERNLHEVSDAYSREDVGTLWSLATPEMA
                     GYMQEDLNENARKGVVNKSSNVRLLQGDLAEAWREGDTDYATVAMRYAINDAVLDKAT
                     GRVIEGSPNEPSEVTELWTFRRDRGGPWKLSAIQQTA"
     gene            complement(1038..2126)
                     /locus_tag="VHN20_11625"
     CDS             complement(1038..2126)
                     /locus_tag="VHN20_11625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019197772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HEX2726460.1"
                     /translation="MKRRQFLTAAGAGLTATAVASPAVAQATPEVKWRLTSGFPKSLD
                     TLYGAADLFARYVAEATDGKFQVQVFAAGEIVPTLQAIDAVGNGTVELAHTASYYHVG
                     KDPTFAFGTTVPFGPNSRQMTAWAYHGDGLKLLNEFYAKHNLYMLPGGNTGTQMGGWF
                     RKEIKTVDDLKGLKFRIAGLAGQMLQKLGVVPQQIPGGDIYPALERGTIDAAEWVGPY
                     DDEKLGFYRVAPYYYFPGFWEGAAMLGFFFNTEKWNALPRNYKAIAQAAAAYAHSDMQ
                     AKYDARNPGALSRLLVAGAQLRPFSQEIMEASFKAAGEMYDEIGSKNAEFKKLYDNQR
                     AFRNEQYAWFRSAEYYFDNFMIRAGTRN"
BASE COUNT          357 a          785 c          854 g          428 t
ORIGIN      
        1 aggcgcgtcc cggacgcagc ggcggtagct tcggctcgcg aggggggcgc acgtatgatg
       61 cgccgcccgc gacgcggacc gcgccgacgc cgccggcgca gccgatgcag cgctcgcagg
      121 ccccgcagcc gggccccaac atgcagcgcc cggcacccgt gccgcaggct caggccgcgc
      181 agccgcgccg cttcggcttc ggcaccggcc tgttcgcggg cctgctcggc gcgggcctcc
      241 tcggcatgct gttcggacag ggcttcttcg gcggcctcgc cgggcttgcc tcgatgttcg
      301 ggctgttgct gcaggtcggc ctcatcgtcg gcctcgtctg gctggcggtg cgcttcttcc
      361 gccgccgtca gcagccggcc ctggctggag ctccgggcga gccgatggag cgctcgtcgc
      421 tcggcggcat ggttccgccg atcgggggcg gccgcatggg cggtctcggt gggctcggcg
      481 gcctcggccg ttcaggcccg gccccggcgc agccgcgcgt gcccggacgc agcgacgagg
      541 tcggcatcgg cccggccgac tatgaggcgt tcgagcgcaa cctgcacgag gtcagcgacg
      601 cctactcgcg cgaggacgtg ggcacactct ggagcctcgc cacgcccgag atggccggct
      661 acatgcaaga ggatctgaac gagaatgccc gcaagggcgt cgtcaacaag tcctccaacg
      721 tgcgcctgct gcagggcgac ctcgccgagg cctggcgcga gggcgacacc gactacgcga
      781 cggtggcgat gcgttacgcg atcaacgacg cggtgctcga caaggcgacc ggccgcgtca
      841 tcgagggcag tcccaacgag ccgagcgagg tgacggagct gtggacgttc cggcgcgatc
      901 gcggcggccc gtggaagctc tcggcgatcc agcagaccgc ctgaccgcgg atccacgaaa
      961 agaaacaagc ggccggtgac gaactggccg cttttttaat tcccctcgcc gcctgcgggc
     1021 cgcgtatcca agcatgctca gttgcgcgtg ccggcgcgga tcatgaagtt atcgaaatag
     1081 tattccgcgg agcggaacca cgcgtattgc tcgttccgga aggctcgctg gttgtcgtag
     1141 agcttcttga actcggcgtt cttgctgccg atctcgtcgt acatctcccc ggcggccttg
     1201 aacgaggcct ccatgatctc ctggctgaac gggcgcaatt gcgcgcccgc gacgaggaga
     1261 cggctgaggg cgcccggatt gcgggcgtcg tatttggcct gcatgtcgct atgggcatag
     1321 gctgcggcgg cctgcgcgat cgccttgtag ttcctcggca gcgcgttcca tttttcggtg
     1381 ttgaagaaga agccgagcat ggcggcgcct tcccagaagc ccgggaagta atagtacggc
     1441 gcgacgcgat agaagccgag cttctcgtcg tcgtacgggc ccacccattc cgccgcgtcg
     1501 atggtgccgc gctcgagggc cgggtagatg tcgccgcccg ggatctgctg cggcaccacg
     1561 ccgagcttct gcagcatctg accggcgaga ccggcgatcc ggaacttcag tcccttgagg
     1621 tcgtcgacgg tcttgatctc cttgcggaac cagccgccca tctgcgtgcc ggtgttgccg
     1681 cccggcagca tgtaaaggtt gtgcttggcg tagaactcgt tgagcagctt gagcccgtcg
     1741 ccgtgatacg cccaggccgt catctgccgc gagttcggcc cgaacgggac ggtggtgccg
     1801 aaggcgaagg tcgggtcttt gccgacgtga taatacgagg cggtatgggc gagttcgacg
     1861 gtgccgttgc cgaccgcatc gatcgcctgc agcgtcggga cgatctcgcc ggcggcaaag
     1921 acctgcacct gaaacttgcc gtcggtggct tccgcgacgt agcgcgcgaa caagtcggcg
     1981 gcgccgtaaa gcgtgtcgag cgatttcggg aagccggagg tcaggcgcca tttcacctcg
     2041 ggcgtggcct gcgcgacggc ggggctggcg acggccgtgg cggtcaggcc ggcgccggcg
     2101 gcggtgagga attgacggcg tttcacatgt ccctcctgga gcgttcttgt tgacggactg
     2161 cttgctgacg gatggcttgg ctgatcgcgg aaaaagcacg gaacggggtg gcgctgcaat
     2221 tgcatttcgc acgccccggc cggctgcgcc cctggccggc tgcacgttcc aagccctccg
     2281 gcaggcgtta atgctgtccg tcggggtgac gttgagaatc tgtcgcccga tcagcggctt
     2341 ggggtgtttt cctggttaat ttcaagccgt taggcactgg catcaggagt gctcgggcct
     2401 tcgaaatcga tgctgctgtc ttgc
//
LOCUS       DATAIQ010000701         3292 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_247379, whole genome shotgun sequence.
ACCESSION   DATAIQ010000701 DATAIQ010000000
VERSION     DATAIQ010000701.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3292)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3292)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3292
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_247379"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..3124)
                     /locus_tag="VHN20_11630"
     CDS             complement(<1..3124)
                     /locus_tag="VHN20_11630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX2726461.1"
                     /translation="MQVSDLFIRRPVFSVVVSLLLIVGGLASLRQLPVREYPAVDPPI
                     VSVTTVYKGASNEVVESRITEIIEGAVAGIEGIRQVRSGSRNERSSVVIEFHLSRSQD
                     TAAADVRDAVSRVMGRLPDGIDPPVIRKVDANSNAMMWVSVISSSLDPLELTDFLKRV
                     YVDRLSTVPGVATVNIGGERRFAMRIWLDRTALAARGLTAQDVENAIKKQNVELPGGR
                     LESAQRELTVKTDSRLSTPEEFRNIVVSNRNGYLVRLGEVARVEVGAEDTRFEFYQNG
                     KVTIGLGIVRQSTANTLEVADGVRAELEQLKSSLPPDTVAEVSYDESAFIRASINGVL
                     RTLVEGIILVVLVILIFLRDWRSTIVALVAIPVSVLASFMVVAMFGASINVLTLLAIV
                     LAIGIVVDDAIVEIENIHRRIEHGQPPLLASFDGAREIGFAVIATTCTLMAVFVPLAF
                     MTGNTGRLFREFAIQLAAAIFFSGVVARTLTPMMCSKLMVPAHGPIHRWTEPVFSGMI
                     SGYRRLLSRALNIPLVILAIGGVVSLLAVGLFQALPQELAPTEDRGYVIIPIRAPEGA
                     SIDYTRERVREVERALQPVQERGSVASLLSLVAPGFQRPAPVNEGLVIVRLVPWEKRD
                     VKQQQLTQQLQGVTGGFPGARVFAQNPGSLGQRGFQQPIQFVIGGPDYQTLREWRDIV
                     TEKAQQTGLFVSIDSDYKESQPDLRVQIDRARAADLGISIEDIGKTLELMFGEREVST
                     FINRGQEYPTIVRARSQDRTTPSDLANTFMRAQNGDLVPLSAFVKLSEAAAPQELNRF
                     DRLRAITIESSLAPGVSIGQGLQTLEQIVRDELPAEVRIGYKGQSKEFKDATGAIYVT
                     FGLALLVVFLVLAAQFESWINPAIVMLTVPLAVTGGLLALVMTGQSLNIYSQIGMILL
                     IGLMTKNGILIVEFANQLRQRGHGVREAVIEASALRLRPILMTSIATMGGAIPLAWSV
                     GAGAEARNAIGWVIVGGVALSTLLTTLVVPSLYLLIGGYSRPANYTGNLLDRMRQDEE
                     AKGRGHVVEPA"
BASE COUNT          567 a         1054 c         1152 g          519 t
ORIGIN      
        1 cggccggctc gaccacatgg ccgcgccctt tggcctcttc gtcctgccgc atgcggtcga
       61 gcaggttgcc ggtgtagttt gccgggcgcg aatagccgcc gatcagcaga tagagcgacg
      121 gcaccacgag agtggtgagc agcgtcgaga gcgccacgcc gccgacgatc acccagccga
      181 tggcgttgcg cgcctcggcg ccggcaccga ccgaccaggc gagcgggatg gcacccccca
      241 tggtggcgat cgaggtcatc aggatcggtc gcaggcgaag cgcagaggct tcgatcaccg
      301 cctcgcgcac gccgtgcccg cgctggcgca gctgattggc gaactcaacg atcaggatac
      361 cgttcttggt catcaggccg atcagcagga tcatgccgat ctggctgtag atgttgagcg
      421 actgcccggt catgacgagc gcgagcaggc cgcccgtgac ggcgagcggc accgtcagca
      481 tgacgatcgc cgggttgatc cagctctcga actgcgcagc caggaccagg aagacgacca
      541 gcagcgccaa gccgaaggtg acatagatgg cgccggtcgc gtccttgaac tccttcgact
      601 ggcccttgta gccgatgcgc acctcggccg gcagctcgtc gcgcacgatc tgctcgaggg
      661 tttgcaagcc ctggccgatc gatacgccgg gagccagcga cgattcgatg gtgatcgcgc
      721 gcaggcggtc gaagcggttg agctcctgcg gcgctgccgc ctcgctgagc ttcacgaagg
      781 ccgagagcgg cacgaggtcg ccgttctgcg cgcgcatgaa ggtgttggcg agatctgacg
      841 gcgtggtgcg atcctgcgag cgggcacgca cgatggtcgg atattcctgg ccgcggttga
      901 tgaaggtcga gacctcacgc tcgccgaaca tcagctccag cgtcttgccg atatcctcga
      961 tcgagatgcc gaggtcggcg gcgcgggcgc ggtcgatctg cacgcgcagg tcgggctgcg
     1021 actccttgta gtcggaatcg atgctgacga agaggccggt ctgctgcgcc ttttcggtga
     1081 cgatgtcgcg ccattcgcgc agcgtctggt aatcgggtcc gccgatgacg aactggatcg
     1141 gctgctggaa accgcgttgg ccgagcgagc cgggattctg tgcgaacacg cgagcgccgg
     1201 gaaagccgcc ggtgactcct tgcagctgct gcgtcagctg ctgctgcttg acgtcccgct
     1261 tctcccacgg aaccagccgg acgatgacga ggccctcgtt caccggcgca ggccgctgga
     1321 agcctggcgc caccaggctg agcagggagg cgacgctgcc gcgttcctgc accggctgca
     1381 gggcacgctc gacctcgcgg acgcgctcgc gcgtgtagtc gatgctggcg ccctccggcg
     1441 ccctgatcgg aatgatgacg tagccgcggt cctcggtcgg cgccagttcc tgcggcaggg
     1501 cctggaacaa gccgacggcg aggagagaca cgacgccgcc gatcgccaga atgacgagcg
     1561 ggatattgag tgcgcgcgac agcaggcggc gatagccgct gatcatgccg ctgaacacgg
     1621 gctcggtcca gcgatggatc gggccgtgcg caggcaccat cagcttcgag cacatcatcg
     1681 gcgtcagcgt gcgcgcgacg acacctgaga agaagatggc ggcggcgagc tgaatggcga
     1741 actcgcggaa gaggcgcccg gtgttgccgg tcatgaaggc gagcggcacg aacacggcca
     1801 tcaacgtgca ggtggtggcg atcacggcga agccgatctc gcgcgcaccg tcgaatgaag
     1861 cgaggagcgg gggctggccg tgctcgatgc gccggtggat gttctcgatc tcgacgatgg
     1921 cgtcgtcgac cacgatgccg atggcgagca cgatggcgag cagcgtgagc acgttgatcg
     1981 aggcgccgaa catcgccacg accatgaacg aggcgagcac cgagaccggg atcgccacca
     2041 gggcgacgat ggtcgagcgc cagtcgcgca ggaagatgag gatcaccagg acgacgagga
     2101 tgatgccttc gaccagggtc ctcagcacgc cgttgatgga ggcgcggatg aaggcgctct
     2161 cgtcatacga gacctcggca accgtgtcgg gcggcaacga cgatttgagc tgctcgagct
     2221 cggcgcgcac gccgtcggcg acttcgaggg tgttggcggt cgactggcgg acgatgccga
     2281 ggccgatcgt caccttgccg ttctgataga attcgaagcg ggtgtcctcg gcgccgacct
     2341 cgaccctcgc cacctcgccg aggcgcacga gataaccgtt cctgttcgac acgacgatgt
     2401 tgcggaattc ctccggcgtc gacaggcgcg aatcggtctt cacggtcagc tcgcgctggg
     2461 ccgattccag acgtccgccc ggcagctcga cattctgctt cttgatggcg ttctcgacgt
     2521 cctgcgcggt gaggccgcgc gcggcgagcg cggtgcggtc gagccagatg cgcatggcga
     2581 agcgccgctc gccgccgata ttgacggtcg cgacgcccgg cacggtggac aggcggtcga
     2641 cgtagacgcg cttcaggaaa tcggtcagct ccagagggtc gaggctgctg gagattaccg
     2701 acacccacat catcgcgttg gaattggcgt ccaccttgcg gatgaccggc ggatcgatgc
     2761 cgtcgggcag gcgtcccatg acgcgcgaga cggcatcacg cacatccgcg gcggccgtgt
     2821 cctggctgcg gctgaggtgg aactcaatca ccacggacga gcgctcgttg cggcttccgg
     2881 agcggacctg gcggatgccc tcgatccccg ccacggcgcc ttcgatgatc tcggtgatgc
     2941 ggctttcaac gacctcgttc gaggcgccct tgtagaccgt cgtcaccgag acgatcggcg
     3001 ggtcgacggc cggatactcg cgcaccggga gctggcgcag ggaggcgagc ccaccgacga
     3061 tcagcagcag gctgacgacg accgagaaga ccggacggcg aatgaacagg tcggagactt
     3121 gcatcgtctg ttcgaaacct tcgtcgtttc tcctcgccta aaccgcgggg agagagatta
     3181 tccgcgccgt tccgacgcga tcgcgccgcc ggtcggcggc gttgccgcgc gcgggcgcgc
     3241 cggaaccgcg ttctcggccg cacccctcgg accgggcgtc ccggcctgcg gc
//
LOCUS       DATAIQ010000702         4405 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_339180, whole genome shotgun sequence.
ACCESSION   DATAIQ010000702 DATAIQ010000000
VERSION     DATAIQ010000702.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4405)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4405)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4405
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_339180"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..544
                     /locus_tag="VHN20_11635"
     CDS             <1..544
                     /locus_tag="VHN20_11635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726462.1"
                     /translation="TETTPRLLNALTGTKFRIISGYSGTSDGVLAMERGEVQGLGDWS
                     WSNVKTRRPDYLRDKKIRVLLQVTTEKMPDLPDVPLAKDLVKNEGDRKIMALFLAQKS
                     AARPVVAPPGVPADRMAAIRTAFENMIKDPDFLKDAAATKLELDPSPASEVEKVIQIF
                     ASTPDDVGQKLKEAIEPPKR"
     gene            complement(629..3451)
                     /locus_tag="VHN20_11640"
     CDS             complement(629..3451)
                     /locus_tag="VHN20_11640"
                     /inference="COORDINATES: protein motif:HMM:NF017076.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEX2726463.1"
                     /translation="MQKSPKGWTGALRSFQPLALSWPFVVLAALVVSASATGALLPIK
                     AAVYELRFDLARRPPSGDIVLVEIDSKSIAALGTWPWPRRVHGALVDELTEAGAAQIG
                     FDVDFSARSDDAEDAMFEDALRRAGGSTILATFAQKLSNARGDNQIAFNRPLKRFADN
                     AWAATVNVFPDRDGLVRRFPFGAMVAGEPTPSMPAMLANTPGQIGGDFLIDFGIQALD
                     IDRISAIDVLGGRVETSRLAGRKVIIGASAVELRDFFQVPALGHIPGPLVQALAAETL
                     AQGRSLRETGMPLAAGGAILICLGGVALRRMRWSVGLVTLAGCAVSFELAGVVLQRLH
                     PILLDSSAWQASLAGVALIATAREIDFRRILLAISRQETQDTRTVLDQIVADNFAGVI
                     VATDDGVITAASRMAADILHPGAGAPLIGRTIEETLPADLVEIMRHAMQQYREGSWRP
                     RQPGDFAYARGGRSTSILEYVVTPSRLGGRVDENGAAAPDRVAACLTFVDITERRNAE
                     ARIAYMAQFDTLTGEPNRNQFAEKLAQAMQAEGAAGAGCTLFHFDIDRFKTVNDTLGR
                     RYGDLLLREVAKRARLLIAQNDFIARLDSDQFVVIRTGPVTRDEAEALAERLVEKLGR
                     PYLLDGHRAIVSVSMGIAQSDDADDPVSLTKNAETAHRRSKDAGGNRWSFFDAALDLG
                     FRDRQRLELELREALERDEFAVAYQPQIELQTNEIIGVEALVRWRHPTRGFVSPAEFI
                     PVAEDTGLIEPLGAWVLRRACEDAASWPRAIKVAVNVSPVQFTRGDLVKTVADALEAT
                     GLPASRLELEITESLFVRESAETIATADAVRRMGIGFALDDFGTGYSSLNYLRKFEVQ
                     KIKLDRSFVAGLPAEQESIAIVQAVINMARDLGIRTNAEGIETAEQRDCLKGLGCKEG
                     QGYLFGKPQPAADIARALGAPAAQAA"
     gene            complement(3494..>4405)
                     /locus_tag="VHN20_11645"
     CDS             complement(3494..>4405)
                     /locus_tag="VHN20_11645"
                     /inference="COORDINATES: protein motif:HMM:NF016648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FecR family protein"
                     /protein_id="HEX2726464.1"
                     /translation="VTVQTSDNARAMLTRGNDAMVVGPKSALAMQSGWGAKTTTVLQR
                     SGQITLEVETQGAPHFTVETPFMAAVVKGTRFDVRVSARDANVSVQRGRVQVADFASG
                     QTADITPGQRAGVRAGRPGLSLGGRGQMPAIQAGQPRAAVVPAVGRADVVQPSAAAAA
                     TTSAASAGFGPGRSWSASAAVESKARGPAERARAGSASAFGEGAANTGVANAAGRGNG
                     NAFGNGNGVANGNAGGNGNGKGVGNNNAGGNGNGNGNGVGNSNAGGNGNGNGNGNGVG
                     NNNAGGNGGGNNNAGGNGKGGGKGGRA"
BASE COUNT          640 a         1521 c         1559 g          685 t
ORIGIN      
        1 caccgagacg acgccgcgcc tgctcaatgc gctgaccggg accaagttca ggatcatctc
       61 gggctattcc ggcacgtccg acggcgtgct cgccatggag cgcggcgagg tgcaggggct
      121 cggcgactgg tcgtggtcga acgtcaagac gcgccggccg gactaccttc gcgacaagaa
      181 gatccgcgtg ctcctgcagg tgacgacgga aaagatgccc gacctgccgg acgtgccgct
      241 cgccaaggac ctcgtcaaga acgaaggcga caggaagatc atggcgctgt tcctggcgca
      301 gaaatcggcg gcgcggccgg tggtggcgcc gcccggcgtt ccggccgacc gcatggcggc
      361 gatccgcacc gccttcgaga acatgatcaa ggacccggat tttttgaagg acgcggccgc
      421 caccaagctc gagctcgacc cgtctccggc ctccgaggtc gagaaggtga tccagatctt
      481 cgcctcgacg cccgacgacg tcggccagaa gctcaaggaa gcgatcgagc cgccgaagcg
      541 gtagcgatag gcgcgtgaat ggcgagagcg actgaagcga atagcgaaag cgcgtcgact
      601 actcgctact cgccatgccc gttcggcatc acgccgcctg cgcggcgggc gccccgagcg
      661 cacgggcgat gtcggccgcc ggttgcggct tgccgaacag gtagccctgg ccttccttgc
      721 acccgagccc cttgaggcaa tccctctgct cggctgtctc gatgccctcg gcgttcgtgc
      781 gaatgccgag gtcgcgcgcc atgttgatga cggcctgcac gatggcgatc gattcctgct
      841 ctgccggcag cccggcgacg aaggagcggt cgagcttgat cttctgcacc tcaaacttgc
      901 gcagatagtt gagcgacgaa tagccggtcc cgaaatcgtc aagcgcgaag ccaatgccca
      961 tgcgccgcac ggcgtcggcg gtcgcgatgg tctcggcgct ttcgcgcacg aacagcgact
     1021 cggtgatctc gagctcgagc cgcgaggcgg gaaggccggt cgcctcgagc gcgtccgcga
     1081 ccgtcttgac gaggtcgccg cgcgtgaact ggaccggcga gacgttcacg gcgaccttga
     1141 tggcccgggg ccagctcgcc gcatcctcgc acgcgcggcg cagcacccat gcgccgagcg
     1201 gctcgatgag gccggtgtct tcggccaccg gaatgaactc cgccggcgag acgaagcccc
     1261 gcgtcgggtg gcgccagcgc acaagcgcct cgacgccgat gatctcgttc gtctggagtt
     1321 cgatctgcgg ctgataggcg accgcgaact cgtcgcgctc gagcgcctcg cgcagctcga
     1381 gctcgagccg ctggcggtcg cggaagccga gatcgagcgc cgcatcgaaa aagctccacc
     1441 ggttgccccc cgcgtccttc gagcgccggt gcgccgtttc ggcgttcttg gtgagcgaga
     1501 cgggatcgtc cgcatcatcg ctctgtgcga tgcccatgct cacgctgacg atggcccggt
     1561 gcccgtcgag gagatacggc ctgccgagct tctccaccag ccgctcggcg agcgcctccg
     1621 cctcgtctcg cgtcacgggc cctgtgcgaa ttacgacgaa ctggtcgctg tcgaggcgcg
     1681 cgatgaagtc gttctgggcg atcagcagcc gcgcccgctt cgctacttcg cgcagcagga
     1741 gatccccgta gcggcggccg agcgtgtcat tgaccgtctt gaagcggtcg atgtcgaagt
     1801 gaaacagcgt acagccggcg ccggcagccc cttcggcctg catcgcctgc gcgagctttt
     1861 ccgcgaactg gttgcggttc ggctccccgg tcagggtatc gaactgcgcc atgtaggcga
     1921 tgcgcgcctc ggcgttgcgg cgctcggtga tgtcgacgaa ggtgaggcac gcggcgaccc
     1981 ggtccggcgc agccgcgcca ttctcgtcga cgcgtccgcc gaggcgtgac ggcgtcacca
     2041 cgtattcgag gatgctcgtg ctcctgccgc cgcgcgcata ggcgaaatcg cccggctgtc
     2101 gcggccgcca gctgccctct cggtactgct gcatggcgtg gcgcatgatc tcgaccagat
     2161 ccgcaggcag cgtctcctcg atcgtgcgcc cgatcagcgg agcgccggcg ccgggatgca
     2221 ggatgtcggc cgccatgcgg ctcgccgcgg tgatcacgcc gtcgtcggtg gcgacgatca
     2281 cgccggcgaa gttgtcggcg acgatctgat cgagaaccgt ccgcgtgtcc tgcgtttcct
     2341 gccgcgagat cgccagcagg atgcggcgga aatcgatctc gcgcgccgtc gcgatcagcg
     2401 ccacgccggc gaggctcgcc tgccacgccg agctgtcgag gaggatcgga tggagccgct
     2461 gcagcacgac gcccgcgagc tcaaagctca ccgcgcatcc cgccagggtc acgaggccga
     2521 ccgaccagcg catgcggcgc aaggcgacgc cgccgaggca gatcaggatc gcgccgccgg
     2581 ccgcgagcgg catgccggtc tcgcgcaggc ttctgccctg cgccagcgtt tcggcggcga
     2641 gcgcctggac gagcgggccg gggatgtgcc cgagggcggg cacctggaag aagtcgcgca
     2701 gctcgaccgc cgacgcgccg atgatcacct tgcgcccggc gagacggcta gtctcgacgc
     2761 ggccgccgag cacgtcgatg gcggagatgc ggtcgatgtc gagcgcctgg atgccgaagt
     2821 cgatcaggaa gtcgccgccg atctgtcccg gcgtgttcgc gagcatcgcc ggcatcgacg
     2881 gcgtcggctc gccggcgacc atggcgccga acgggaagcg gcgcacgagg ccgtcccggt
     2941 cggggaagac gttgacggtg gcggcccatg cgttgtcggc aaagcgtttg agcgggcggt
     3001 tgaacgcgat ctggttatcg ccgcgcgcgt tgctgagctt ctgcgcgaag gtggcgagga
     3061 tcgtgctgcc gccggcgcgg cgcagcgcgt cctcgaacat cgcgtcttcg gcgtcgtccg
     3121 agcgcgcgct gaaatcgacg tcgaagccga tctgcgccgc gcccgcttcg gtcagttcgt
     3181 cgaccagggc gccgtggacg cgccgcggcc acggccaggt gccgagcgcg gcgatgcttt
     3241 ttgagtcgat ctcgacgagg acgatgtcgc cgctcggcgg gcggcgcgcc aggtcgaagc
     3301 gcagctcgta gacggccgcc ttgatcggga gcagggcccc ggtcgcggag gccgagacaa
     3361 cgagcgccgc gaggaccacg aacggccacg acaacgccaa aggctggaag gaacgcagcg
     3421 ctcctgtcca gcctttgggt gacttttgca tcagacggcc catcggacgt cccggttgtg
     3481 gtcggcgctc cggctaggcg cggcctcctt tgccgccgcc cttgccgttg ccgccggcgt
     3541 tgttgttgcc gccgccgttg ccgccggcgt tgttgttgcc gacgccattg ccgttgccgt
     3601 tgccgttgcc gttgccgccg gcattgctgt tgccgacgcc attgccgttg ccattgccat
     3661 tgccgccggc attgttgttg ccgacgccct tgccgttacc gttgccgccg gcattgccgt
     3721 tggcgacacc gttgccgttg ccgaaggcat tgccgttgcc gcggccggcc gcgttggcga
     3781 cgccggtgtt ggcggcgcct tcgccgaagg ccgacgcgct gccggcacgg gcacgctcag
     3841 cggggccgcg cgccttgctc tcgaccgccg ccgatgccga ccacgagcgc ccggggccga
     3901 agccggccga ggcggccgag gtcgtcgcgg cagccgccgc ggacggctgc accacgtcgg
     3961 cgcggccgac tgccggcacc acggccgcgc gcggctggcc ggcctggatc gccggcatct
     4021 ggccgcggcc gccgaggctc aggccgggcc ggccggcacg cacgccggcg cgctggccgg
     4081 gcgtgatgtc ggcggtctgg cccgacgcga aatcggcgac ctgaacgcgg ccgcgctgca
     4141 cgctgacatt ggcgtcgcgc gccgacacgc ggacgtcgaa gcgggtgccc ttgacgaccg
     4201 ccgccatgaa cggcgtctcg acggtgaaat gcggcgcgcc ctgggtttcg acctcgagcg
     4261 tgatctggcc cgagcgctgc agcacggtgg tcgtcttggc gccccagccg gactgcatgg
     4321 cgagcgccga tttcggcccg accaccatgg cgtcgttgcc gcgcgtgagc atggcgcggg
     4381 cattgtcgga tgtctggacg gtgac
//
LOCUS       DATAIQ010000703         2042 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_62696, whole genome shotgun sequence.
ACCESSION   DATAIQ010000703 DATAIQ010000000
VERSION     DATAIQ010000703.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2042)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2042)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2042
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_62696"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            289..1215
                     /locus_tag="VHN20_11650"
     CDS             289..1215
                     /locus_tag="VHN20_11650"
                     /EC_number="2.5.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004337 - geranyltranstransferase activity
                     [Evidence IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="farnesyl diphosphate synthase"
                     /protein_id="HEX2726465.1"
                     /translation="MTFSTADFTDALARVAAPIEALLDQLLAHAARRGEIARPPRLVA
                     AMRHATLGGGKRLRPFLTVETARMLGREGSAAMRAGAAIELLHCYSLVHDDLPAMDDD
                     DLRRGRPTVHRAYDEATAILAGDALQTLAFEVLADPATHPDAEVRADLVLGLARAAGL
                     AGMAGGQMLDLAAEGRYGGTSSEEAEIRQIDALKTGAIIAFAVEAGAIIGRADEVARG
                     NLLGFGRAIGQAFQIADDLLDREGSAEAVGKRTGKDQQHGKATLIDLLGLDAARRECE
                     RLVDEALAALQPFGDKADVLRQAARFTATRRS"
     gene            complement(1224..>2042)
                     /locus_tag="VHN20_11655"
     CDS             complement(1224..>2042)
                     /locus_tag="VHN20_11655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007560372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015079 - potassium ion transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KUP/HAK/KT family potassium transporter"
                     /protein_id="HEX2726466.1"
                     /translation="IALVLAFETSSDLAHAYGISVFGAMAVDAVLAIIVIWKGWRWSL
                     ALTLVTIVPFLIIDLAFFGANLTKLFLGGYVPVLMAAALITVMWTWAKGTRILFEKTR
                     KADVPLIELIGMLSKSPPHRVKGTAVFLTSDPETAPSALLHNLKHNKVLHEKNVVLTI
                     RTVDIPRMRDEERVTIDHLGDSFWKVGMTYGYMEMPNVPRGLAMLRKQGFKFDIMATS
                     FFLSRRSIRPAAQSGMPLWQDKLFIALATTATDATDFFQIPTGRVVEVGTQVTV"
BASE COUNT          349 a          677 c          698 g          318 t
ORIGIN      
        1 ctacgtcggc caccaggatc acggcggtcg cgccgagcac gacgacggcc acccagccga
       61 acgcccggcg cacccaaccg gcgcctgctc cgccgagcat ccgtatgcgc aaagctttcc
      121 acatggaggg cgcagccttg acctgaaccg gcggctccgg caagccgctg aagatggcgc
      181 aagccgaata gcgaatggcg atcagacttt ctccacggct ttagccgcgg cgaccgcgta
      241 gctcgccatt cgctattcgc cattcaccat tggccgctaa gacttaccgt gacgttctcc
      301 accgccgact tcaccgatgc attggcgaga gtcgccgccc cgatcgaagc gctgctcgac
      361 cagcttctcg cgcacgcggc gcgtcgcggc gagattgcac ggccgccgcg gctggtcgcg
      421 gccatgcgtc atgcgacgct tggcggaggc aagcgcctgc gtccgttcct cacggttgag
      481 acggcccgca tgctcggccg ggaaggcagc gcggcgatgc gcgccggcgc cgcgatcgag
      541 ctcctgcatt gctactcgct ggtgcacgac gacctgcccg ccatggatga cgacgacctg
      601 cgtcgcgggc gtcccaccgt gcatcgcgcc tacgacgaag cgacggcgat cctggccggc
      661 gatgccttgc agacgctcgc cttcgaagtc ctggcggatc cggcaacgca tcccgatgcc
      721 gaggtgcgtg cggacctggt gctcggcctc gcccgcgctg ccggcctcgc cggcatggca
      781 ggtggccaga tgctcgatct ggccgcagaa ggccgctacg gcgggacatc ttcggaggag
      841 gcggaaatcc gccagatcga cgcgctgaag accggcgcca tcatcgcctt tgcggtcgag
      901 gccggcgcca tcatcgggcg cgcggacgag gtcgcgcggg gcaatctgct cgggttcggc
      961 cgggcgatcg gacaggcgtt ccagatcgcc gacgacctgc tcgatcgcga gggctcggcg
     1021 gaagccgtcg gcaaacgtac gggcaaggat caacagcacg gcaaggcgac gctgatcgac
     1081 cttctgggcc tcgacgcggc gcggcgggaa tgtgagcggc tcgtcgacga ggcgctcgcg
     1141 gcgctgcagc cgttcggcga caaggccgat gtcttgcgcc aggcggcgcg tttcaccgcg
     1201 acgcggaggt cgtaggagag gcgctacacc gtcacctgcg tgccgacctc cacgacccgg
     1261 ccggtcggga tctggaagaa gtcggtggcg tccgtggctg tcgtcgcgag cgcgatgaaa
     1321 agcttgtcct gccagagcgg catgcccgac tgcgcagccg ggcggatcga gcgccgcgac
     1381 aggaagaacg acgttgccat gatgtcgaac ttgaagccct gcttgcgcag catggcgagg
     1441 ccgcgcggca cgttcggcat ctccatgtag ccgtaggtca tcccgacctt ccagaagctg
     1501 tcgccgagat gatcgatggt gacacgctcc tcgtcgcgca tgcgcggaat gtcgacggtc
     1561 ctgatcgtca gcaccacgtt cttctcgtgc aggaccttgt tgtgcttgag gttgtggaga
     1621 agcgccgagg gggcggtctc gggatcgctg gtgaggaaca ccgccgtgcc cttgacgcga
     1681 tgcggcgggc ttttcgacag catgccgatc agctcgatga gcggcacgtc ggccttgcgc
     1741 gtcttctcga acaggatgcg cgtgcctttg gcccaggtcc acatcaccgt gatcagcgcc
     1801 gccgccatca ggacaggcac atagccgccc aggaacagct tggtcaggtt ggcgccgaag
     1861 aaagcgagat cgatgatcag gaacggcacg atggtgacga gcgtcagggc aaggctccag
     1921 cgccagccct tccagatcac gatgatggcg aggacggcgt cgaccgccat ggcgccgaac
     1981 acggagatgc cataggcgtg cgcgaggtcg ctcgacgtct cgaacgcgag cacgagggcg
     2041 at
//
LOCUS       DATAIQ010000704         1693 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_36393, whole genome shotgun sequence.
ACCESSION   DATAIQ010000704 DATAIQ010000000
VERSION     DATAIQ010000704.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1693)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1693)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1693
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36393"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..326
                     /locus_tag="VHN20_11660"
     CDS             <1..326
                     /locus_tag="VHN20_11660"
                     /inference="COORDINATES: protein motif:HMM:NF019322.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="UTRA domain-containing protein"
                     /protein_id="HEX2726467.1"
                     /translation="VDGEPILAEDIALPLEPFQAFLDVPDEAIGPLLYPVYANVCGQV
                     IARAEETITFGPCAAAEARILGRKAGSPVVMIERIAYGLDNAPREWRRSCGPAERFQY
                     KVEIR"
     gene            363..1337
                     /locus_tag="VHN20_11665"
     CDS             363..1337
                     /locus_tag="VHN20_11665"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEX2726468.1"
                     /translation="MKHCSLPKSIVAAALALAAGAAFAQNFPERPITLIVPAPPGGGT
                     DVFARQLAEIVEPVLKQKVVVENKAGGGGTVGTTLITAARPDGHTLGFIWNSPLTTSP
                     HTLPVAYTPDSYQPVLSIGYSSYVLCAPPDFPAANAKDMIAHVKANPGKFTYGNDGVG
                     GTMQLAAERIFRKLDVKVRPVPFGGAGETAKNFLGGHVTFYGGSLPPILPHVKAGKAK
                     CLILTSAEGNSALPEASGLAALGIGSEETVLWWGLIAPKGVPADRLAAITKAFTEAAN
                     SARFKDAMAQQGAVHALKDGAAMDKVIRGELTALGDVAKAIGLEKKTN"
     gene            1340..>1693
                     /locus_tag="VHN20_11670"
     CDS             1340..>1693
                     /locus_tag="VHN20_11670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726469.1"
                     /translation="MVVDRRRGEVFVGLALAAFGVTLTVLAWRMPAGSVSLPGPGFMP
                     SAVGILLALTGLGCAMRTLLANDAAGTVNLGGPGAWGALATLAIAAFLFESLGAPLTL
                     ALAMTALFRLAGGYAL"
BASE COUNT          264 a          579 c          568 g          282 t
ORIGIN      
        1 tcgtggacgg cgagccgatc ctggccgagg atatcgcgct gccgctcgaa ccgtttcagg
       61 cctttctcga cgtgcccgac gaagccatcg gccccctgct ctaccccgtt tacgcaaatg
      121 tctgcggcca ggtgatcgca cgcgccgagg aaacgatcac cttcgggcca tgtgccgccg
      181 cggaggcgcg tattcttggg cgcaaggcag gctcgccggt cgtgatgatt gagcgcatcg
      241 cctacggcct tgacaacgcg ccgcgcgaat ggcggcgcag ctgcggtccc gccgagcgct
      301 tccaatacaa ggtcgagata cgctgaccaa aagcagctga ccgtacagaa ggggaggatt
      361 ccgtgaagca ttgctcgctg ccgaaatcga tcgtcgccgc ggctctcgcg ctcgccgccg
      421 gcgccgcgtt cgcccagaat tttccggaga ggccaatcac actgatcgtt ccggctcctc
      481 ccggcggcgg cacggacgtg tttgcgcgcc agctcgccga gatcgtcgag ccggttctca
      541 agcagaaggt tgtggtcgag aacaaggcgg gcggcggcgg caccgtcggc accacgctga
      601 tcacggcggc ccggcccgac ggccacacgc tcggctttat ctggaacagc ccgctcacga
      661 ccagcccgca cacgctgccg gtggcctaca cgccggacag ctaccagccg gtcctgtcga
      721 ttggatattc gtcctacgtg ctgtgcgcgc cgccggattt ccccgccgcg aacgccaagg
      781 acatgatcgc gcatgtcaag gccaatccgg gcaagttcac ctacggcaac gacggcgtcg
      841 gcggcactat gcagctcgcc gccgagcgca tattccgcaa gctcgatgtc aaggtgcggc
      901 ccgtgccatt cggcggcgcc ggcgagaccg ccaagaattt cctcggcggc cacgtgacct
      961 tctacggtgg ctcgctgccg ccgatccttc cgcacgtgaa ggccggcaag gccaaatgcc
     1021 tgatcctgac gtcggccgaa ggcaactcgg cgcttcccga ggcatcgggg ctcgcggcgc
     1081 tcggcatcgg ctcggaagaa accgtgctct ggtggggcct gatcgcgccg aagggtgtgc
     1141 cggccgaccg ccttgcggcg atcaccaaag ccttcaccga ggcggcgaac agcgcgcgct
     1201 tcaaggacgc gatggcgcag cagggcgccg ttcacgccct caaggacggg gctgccatgg
     1261 acaaggtcat ccgcggcgag ctcaccgctc tcggcgacgt agccaaggcg atcggtctcg
     1321 agaagaagac gaactgagcg tggtggtcga tcgcaggcgt ggcgaggttt ttgtcgggct
     1381 cgcgctcgca gcgttcggcg tcacgctcac ggtgctggcc tggcgcatgc cggccggcag
     1441 cgtgtcgttg cctgggcccg gcttcatgcc ctctgcggtc ggcattctgc tcgccctgac
     1501 cggcctcggc tgcgcgatgc gcacgctgct ggccaacgat gcggcaggga ccgtcaatct
     1561 cggcgggcca ggtgcgtggg gcgcgctcgc gacgctggcg atcgcggctt tcctgttcga
     1621 gtcgctcggc gcgccgttga ccctggcgct cgcgatgacg gcgttgttcc gcctggccgg
     1681 cggctatgcg ctg
//
LOCUS       DATAIQ010000705         2927 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_129454, whole genome shotgun sequence.
ACCESSION   DATAIQ010000705 DATAIQ010000000
VERSION     DATAIQ010000705.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2927)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2927)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2927
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_129454"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            135..1634
                     /locus_tag="VHN20_11675"
     CDS             135..1634
                     /locus_tag="VHN20_11675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007773183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HEX2726470.1"
                     /translation="MELLDNLALGLGTALQAQNVLYCLLGVVLGTAVGVLPGIGPTAT
                     IAMLLPITFGLPPVGALIMLAGIYYGAQYGGSTTAILVNIPGEASSVVTTLDGHQMAR
                     QGRAGVALGVAALGSFFAGTVATLIIAALALPLTKLALIFGPAEYFSLMVMGLVFAVV
                     LARGSILKAVTMILLGILFSTVGTDLETGQERMTFGSPFLADGIDFAVLAMGLFGISE
                     ILRNLDHSETREVVKQAIGRLLPDANDLKQCALPVLRGTFIGGTLGILPGNGAVLGPF
                     ASYTIEKKLAKDPRRFGRGAIEGVAGPESANNAGAQTSFIPLLTLGIPPNAVMALMVG
                     AMTIHGIVPGPQVMTKSPNLFWGMIASMWVGNLMLLVINLPLIGLWVRLLKVPYRLMF
                     PAILMFCCIGIYSINSLPTDVMWIAVFGVIGYALIRFGFEPAPLLLGFVLGKLMEENL
                     RRALIISRGDMMTFIDRPISAGLLLVAVALLVIAVLPTVRKGREEVFVE"
     gene            1697..2680
                     /locus_tag="VHN20_11680"
     CDS             1697..2680
                     /locus_tag="VHN20_11680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009494539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEX2726471.1"
                     /translation="MNKVNKIALAAAAFGLAATGAYAQSNYPQRPITMIVPFAAGGPT
                     DVIARIVGDHMSRTLGQQIVVENVVGAGGTTGMTRAAQAAPDGYTIAMGHMGTQGAAP
                     ALYPNLKYDPTKDFQPLGMAAGTPIVIVAKKDFPAKDLKSFNEYVKANATKLNMAHAG
                     VGSVSHTTGVLLNSILDVKPTMVAYRGTGPALNDLMSGQVDFMTDQIVNVAPQITGGN
                     IKAYAIATPERSPALPDLPTTKEAGLPNYEVSAWNALFAPKATPKEITAKLVDALNKA
                     LDDETTRKRILDLGGVIPDKNGRGPEPLQKLVESEVARWTPVLKAAGVVGQ"
BASE COUNT          476 a         1023 c          910 g          518 t
ORIGIN      
        1 agctaccgca ccagcatcct cgccgccgtg gccatcgccg ccggcctcac cgcgctgtgc
       61 gtgctcgtct tcgtcctcgg cctccaactg cagttgccgt tgctcggtcc gtggctctcg
      121 tcctaggcgc ccagatggag ctcctcgaca atctcgcgct cgggctgggg acagccctgc
      181 aggcccagaa cgtcctctac tgcctcctcg gcgtcgtgct cggtacggcg gtcggcgtgc
      241 tgcccgggat cgggccgacg gcgacgatcg cgatgctgct gccgatcacc ttcggcctgc
      301 cgccggtggg cgcgctgatc atgctcgccg gcatctatta cggcgcgcaa tacggcggct
      361 cgaccacggc gattctggtc aacatcccgg gggaggcgag ctccgtcgtg accacgctcg
      421 acggccacca gatggcccgt cagggccgcg ccggcgtcgc gctcggcgtc gccgccctcg
      481 gctcgttctt cgccggcacg gtggcgacgc tgatcatcgc cgcgctcgcc ctgccgctga
      541 cgaagctcgc cctgatcttc ggcccggccg aatatttctc gctgatggtg atgggcctcg
      601 tcttcgctgt cgtgctggcc cgcggctcga tcctcaaggc cgtgaccatg atcctgctcg
      661 gcatcctgtt ctcgacggtc ggcaccgatc tcgagaccgg acaggagcgc atgacattcg
      721 ggtccccgtt cctggccgac ggaatcgatt tcgccgtgct ggcgatgggc ctgttcggca
      781 tttccgagat cctgcgcaac ctcgaccatt ccgagacgcg cgaagtcgtc aagcaggcga
      841 tcgggcggct gctccccgat gcgaacgatc tgaagcaatg cgcgctgccg gtgctgcgcg
      901 gcactttcat cggcggcacg ctcggcatcc tgccgggcaa cggcgccgtg ctcggtccct
      961 tcgcctccta tacgatcgag aagaagctcg ccaaggatcc gcggcgtttc ggccgcggcg
     1021 ccatcgaggg cgtggccggg ccggaatcgg ccaacaatgc cggcgcgcag acctcgttca
     1081 tcccactgct gacgctcggc attccgccca atgcggtgat ggccctcatg gttggcgcca
     1141 tgaccatcca cggcatcgtc ccgggcccgc aggtgatgac caagagcccg aacctgttct
     1201 ggggcatgat cgcctcgatg tgggttggca acctgatgct cctcgtgatc aacctgccgc
     1261 tgatcgggct gtgggtgcgc cttctgaagg tgccttaccg gctcatgttc ccggccatcc
     1321 tgatgttctg ctgtatcgga atttattcca ttaatagttt accaaccgac gtaatgtgga
     1381 tcgcagtctt cggcgtgatc ggctatgcgc tgatcaggtt cggtttcgaa cccgcgccgc
     1441 ttctgctcgg tttcgtgctc ggcaagctga tggaggagaa cctgcgccgt gcgctgatca
     1501 tctcgcgcgg cgacatgatg accttcatcg accgtccgat cagcgccggt ctactgttgg
     1561 ttgcggtggc tttgctggtc attgccgtcc tgccgaccgt gcgcaaaggt cgcgaagagg
     1621 tgttcgtgga gtgacttgcc aaggcgctag ccatcggcaa tcacgcccga aaattcaggt
     1681 tccagggagt ccgttgatga acaaggtaaa caagatcgcc ctcgccgccg ccgcgttcgg
     1741 cctggcggca accggggctt atgcccagag caactatccg cagcggccga tcacgatgat
     1801 cgtgccgttc gcggccggcg gcccgaccga cgtgatcgcc cgcatcgtcg gcgatcacat
     1861 gtcgcgcacc ctcggccagc agatcgtggt cgagaacgtg gtcggcgctg gcggcacgac
     1921 cggcatgacc cgggcggccc aggcggcccc ggacggctac accatcgcca tgggccacat
     1981 gggcacgcag ggcgccgctc cggccctcta tcccaacctc aaatacgacc cgaccaagga
     2041 cttccagccg ctcggcatgg cggccggcac gcccatcgtg atcgtcgcca agaaggactt
     2101 cccggccaag gacctcaaga gcttcaacga gtatgtgaag gccaacgcca ccaagctgaa
     2161 catggcccat gccggcgtcg gctcggtctc gcacacgacc ggcgtgctcc tgaactcgat
     2221 cctcgacgtc aagccgacca tggtcgctta tcgcggcacc ggccccgccc tcaacgatct
     2281 gatgtccggc caggtcgact tcatgaccga ccagatcgtc aacgtcgccc cgcagatcac
     2341 cggcggcaac atcaaggcct acgccatcgc caccccggaa cgctcgccgg cgctccccga
     2401 cctgccgacc accaaggagg ccggcctgcc caattacgag gtcagcgcct ggaacgcgct
     2461 cttcgcgccc aaggcgaccc cgaaggagat cacggccaag ctggtcgacg ccctcaacaa
     2521 ggccctcgac gacgagacca cgcgcaagcg catcctcgat ctcggcggcg tgatcccgga
     2581 caagaacggc cgcgggccgg agccgctgca gaagctggtc gagagcgagg tcgcccgctg
     2641 gacgcccgtc ctcaaggccg ccggcgtcgt cgggcagtaa gcccgatccg caaggttcaa
     2701 tccgcatcct tgacggcggg ccgcaaggcc cgccgttttt ttgtgccttg cgtccctctc
     2761 tcgagaggag acgcgagacg cggcgcaggc gcgaaaggtg acgaggaagc cgcgacgttc
     2821 atgcatgggc cgcgccttga aatcgcgccg gcagcgcatt acaggaggcc caagggccgc
     2881 cgtagctcag ttggttagag caccagattg tggatctggg ggtcccc
//
LOCUS       DATAIQ010000706         3215 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_129485, whole genome shotgun sequence.
ACCESSION   DATAIQ010000706 DATAIQ010000000
VERSION     DATAIQ010000706.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3215)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3215)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3215
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_129485"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..325)
                     /locus_tag="VHN20_11685"
     CDS             complement(<1..325)
                     /locus_tag="VHN20_11685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726472.1"
                     /translation="MCIACAAAGRSASWASFDHFWPDAASALAGEWADASDWPGVSPA
                     GPARYAASGIGTAPSGVPAIDALIDGMHWDGPVTYGFPTSASAYEPGYAEARNGFASV
                     SPAMAQ"
     gene            complement(461..829)
                     /locus_tag="VHN20_11690"
     CDS             complement(461..829)
                     /locus_tag="VHN20_11690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726473.1"
                     /translation="MSGGISPDTRGGAGLVRFAPPAIAAAHFAFSYAFAALACARRWA
                     DAHVVGFAIVPAVIVIATAVSLAAIATIALANRGRRGGPGASGSGDRFLVYAWRVLAL
                     LAAAAVVLTAAPALFVPSCR"
     gene            complement(826..>3215)
                     /locus_tag="VHN20_11695"
     CDS             complement(826..>3215)
                     /locus_tag="VHN20_11695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /protein_id="HEX2726474.1"
                     /translation="ALLFFLLAGLLALLMRSQLAVPQNRLVGPDLYNQLFTVHGTTMM
                     FLFAVPAMEAVSVYLLPNMQAARDLPFPRLSAFSYWAYAIGGLIFFSSIFFGAAPDAG
                     WFLYPPLSSEYSPGIRSDFWLVGIGFIEISAIAGAIEIIVGVLRTRAPGMSLDKLPVF
                     SWAMLVVAGMIVVAFPSIIIATLLLELERSLQLPFFQPQQGGDPVLWQHLFWFFGHPE
                     VYIIFLPAAGMVSMIVPTLAQRALVGYRAVVLALIATGLLSFGLWVHHMFATGLPPLS
                     LSFFTAMSMLIVIPSAVQVFCWIATIASGRLRLHTPALFILGFLVIFTLGGMTGVMVA
                     VVPFDLQAHDTYFVVAHLHYVLIGGMVFPLVAAIYYWAPLVGRRALSERLGRWVFALM
                     FIGTNVAFFPMHVTGLIGMPRRVYTYLPEMGWSGLNLASTIGAFMIAAGVLLLVIDLA
                     RNLRPTDDDNAGNVWKAGTLEWLPSDVYGTRSIPIVASAYPLWADRGLPRAVEEGRYY
                     LPDAPTGGRETIVTSAVEATPQYVVRLSGPGWAHFLAAVFTAAMFVLLTLQFYGAALA
                     CGVVAFAAVIRWLWELDPAPHPREVHIGGGVVLPTYVTGPMSHTWWAMIVLIIVAAMS
                     FASLAFVYLYLWTVNPPGSWLPRADALPDLVSPALSAGLYSGASALIAFASRVLRRET
                     PGAALPLYILIGLAGLVGGLAVDALALWRTDLRPRQTSYGAAVATLVGFQGLFVATMI
                     VMGLFTLARWATGRLTRIRRVTFDNTMLLWHYTAAQGLATVALVHGFPRLVGAAT"
BASE COUNT          626 a         1076 c         1156 g          357 t
ORIGIN      
        1 cctgcgccat cgccggagag acggaggcaa agccgttcct cgcctcggcg tagccgggct
       61 cgtaggcgct cgcactggtc ggaaatccgt aagtgacggg gccgtcccag tgcatcccgt
      121 caatcagggc gtcgatggcc gggacgccgc tgggcgcggt cccgatgccc gaggcggcat
      181 aacgggccgg cccggccggc gacacgccgg gccagtcgga cgcgtcggcc cactccccgg
      241 cgagggctga ggcggcgtcc ggccagaaat ggtcgaagct ggcccaggac gcggatcgtc
      301 ccgccgccgc gcacgcgatg cacatgacac tgccccgatt tcggtcttgc ccggcgctga
      361 ctagcgcgcc gttcccgccc ggatatgaaa gcggaatgag gcaggctgaa ggccccagcg
      421 cggcctgacg ctacagaaac tgcccagctg gatcaacggc ttaccggcag gacggcacga
      481 acaaggcggg cgccgcggtg agcaccacgg cggccgccgc gagcagcgcc aggacgcgcc
      541 aggcgtaaac gaggaagcga tctcccgaac cggacgcgcc cggcccgccc cgccgccccc
      601 ggttggcgag cgcgatggtg gcgatcgccg caaggctgac ggccgtggcg atcacgatga
      661 cggccgggac gatggcgaag ccgacgacgt gcgcgtcggc ccagcggcgc gcgcaggcaa
      721 gcgccgcgaa ggcgtagctg aaggcgaaat gcgcggccgc gatggccggc ggcgcgaagc
      781 gcacgagccc ggcgccgccg cgcgtgtcgg ggcttatgcc gccgctcacg tggccgctcc
      841 cacgagccgc ggaaagccgt gcaccagcgc aacggtcgcg agcccctgcg cggcggtgta
      901 atgccagagc agcatggtgt tgtcgaacgt cacccgacgg atgcgcgtca gccgccccgt
      961 cgcccagcgc gcgagcgtga agaggcccat cacgatcatg gtggcgacga acagaccctg
     1021 gaatccgacc agcgtcgcga cggcggcgcc gtagctcgtc tggcgcggcc ggagatcggt
     1081 gcgccacagg gcgagcgcgt ccacggcgag cccgccgact agcccggcaa ggccgatcag
     1141 gatgtagagc ggcagcgccg cccccggggt ctcccggcgc aggacccggc tggcgaaagc
     1201 gatcagagcg ctggcgccgc tgtacaagcc cgcgctcagc gccggcgaga cgaggtccgg
     1261 cagcgcgtcg gcgcgcggca gccagctgcc cggcgggttc acggtccaca gatacagata
     1321 cacaaaggcg agcgaggcga acgacatcgc cgcaacgatg atgaggacga tcatcgccca
     1381 ccaagtatgc gacatagggc cggtcacgta ggtcggcagc acgacgccgc cgccgatatg
     1441 gacctcgcgc ggatgcggcg cgggatcgag ctcccacagc caccggatca cagccgcgaa
     1501 ggcgacgacg ccgcacgcca gcgcggcgcc atagaattgc agcgtcagca gcacgaacat
     1561 ggcggcagtg aacacggcgg cgaggaaatg cgcccagccg ggacccgaca gccggacgac
     1621 gtattgcggc gtcgcctcga ccgcgctcgt gacgatggtc tcgcggccgc cggtcggcgc
     1681 atcgggcagg tagtagcggc cctcctcgac ggcgcgcggc aggccgcggt ccgcccacag
     1741 cggataggcg ctggcgacga tcgggatgct gcgcgtgccg tagacgtcgc tgggcagcca
     1801 ttcgagcgtc cccgccttcc acacattgcc cgcgttgtcg tcgtccgtcg gccgcaggtt
     1861 ccgcgcgagg tcgatgacga gcagcagcac gccggcggcg atcatgaacg cgccgatcgt
     1921 cgaagcgaga ttgaggccgc tccagcccat ctccggcaga taggtgtaga cgcgccgcgg
     1981 catcccgatc aggcccgtga cgtgcatcgg gaagaaggcg acgttggtgc cgatgaacat
     2041 cagcgcgaag acccagcggc cgaggcgctc ggagagcgcc cggcggccca ccagcggcgc
     2101 ccaatagtag atcgccgcga ccagcggaaa caccatgccg ccgatcagca cgtaatgcag
     2161 atgcgcgacg acgaaatagg tgtcgtgcgc ctgcaggtcg aacggcacca ccgcgaccat
     2221 cacgccggtc atgcccccga gcgtgaaaat gacgaggaaa ccgaggatga acagcgccgg
     2281 cgtatgcagc ctgagccggc ccgacgcgat cgtggcgatc cagcagaaga cctgcacggc
     2341 gctcgggatg acgatcagca tgctcatcgc cgtgaagaag ctcagcgaca gcggcggcag
     2401 gccggtggcg aacatgtggt ggacccagag cccgaagctc agaaggcccg tcgctatcag
     2461 cgccagcacg acggcgcggt agccgaccag cgcccgctgc gccagggtcg gcacgatcat
     2521 cgacaccatg ccggcggcgg gcaggaagat gatgtagacc tcgggatggc cgaagaacca
     2581 gaacaggtgc tgccacagca ccgggtcgcc accctgctgc ggctggaaga acggcaattg
     2641 cagggagcgc tcgagctcca gcagcagggt cgcgatgatg atcgacggga aggcgacgac
     2701 gatcatgccg gcgacgacca gcatcgccca ggagaagacc ggcagcttgt cgagcgacat
     2761 gcccggggcg cgcgtgcgca gcacgccgac gatgatctcg atggcgccgg cgatcgccga
     2821 gatctcgatg aagccgatgc cgacgagcca gaagtcggac ctgatgccgg gcgaatattc
     2881 ggagctcagc ggcgggtaca ggaaccagcc ggcatcaggg gcggcgccga agaagatgct
     2941 ggagaagaag atcagcccgc cgatcgcata cgcccaatac gagaaggcgc tgagccgcgg
     3001 gaacggcaga tcgcgggccg cctgcatgtt gggcaggaga tagacgctca ccgcctccat
     3061 cgccggaacg gcgaacagga acatcatggt cgtgccgtgc acggtgaata gctggttgta
     3121 gaggtcaggg ccgacgaggc ggttctgcgg aaccgcgagc tggctgcgca tgagcagcgc
     3181 aaggaggccc gcgagcagga agaacagcag cgcgg
//
LOCUS       DATAIQ010000707         3066 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_406233, whole genome shotgun sequence.
ACCESSION   DATAIQ010000707 DATAIQ010000000
VERSION     DATAIQ010000707.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3066)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3066)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3066
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_406233"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..868
                     /locus_tag="VHN20_11700"
     CDS             <1..868
                     /locus_tag="VHN20_11700"
                     /inference="COORDINATES: protein motif:HMM:NF014664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX2726475.1"
                     /translation="DKLESLVLMATSAYLPPADLWNQRASTVRAQGMEAIADAVLARW
                     FTKPFAERAPAVVAATRKHFVSNNAEGYAICCEAIRDMDLRGVIGAIRTPTLIIAGAD
                     DPATPVAMMEDIRGRIPDSELIVVPKAAHLLNIERPEVVNSHLEAFLGRFVSKRTPRA
                     GGVSFEAGLANRKSVLGVEHVERSLANAGAFAMPWQDFITRNAWGEIWGDPALPWKTR
                     SMLTLAMMIALHREEEFKLHVRPALKNGVTLEEMRALILQAAIYAGVPAANAAFRWVK
                     EVLGAELDRVSP"
     gene            complement(902..2221)
                     /locus_tag="VHN20_11705"
     CDS             complement(902..2221)
                     /locus_tag="VHN20_11705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007199167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HEX2726476.1"
                     /translation="MSGMAAAVLGFVVMLALIAARMPVGLAMLVTGSAGYVYLSSLPA
                     FLNYIKTTPYFLFSNYTLSVIPLFILMGAFAERSGLATDLFRAASGFVGHMRGGLAMA
                     VIGACTGFGAICGSSVATTATFGRAALPELRRYRYGEGLATGVIAVGGTLGILIPPSV
                     ILVVYAISTEQNIAKLFQAALFPGLLAALFYCIVIAIVVRRNPEAAPPHAPVPSRERW
                     RGLLLVWPALVIALAVVGGIYGGIFTPTEGASVGAVGMFVIGVVRGTLPWREIKTSLL
                     QTAETAALIFAILLGAEVFNAFLALSQLPTYAATSLAETGLPPYAILVGLLAFYILLG
                     AVMDELAMILLTLPVFFPIVSALDFGMPAEDVAIWFGILVLIVVGIGLTAPPIGLNVF
                     VVSAIARDVPIVKTYRGVLPFVAADIIRLSICVAFPAISLALVRWLT"
     gene            complement(2218..2742)
                     /locus_tag="VHN20_11710"
     CDS             complement(2218..2742)
                     /locus_tag="VHN20_11710"
                     /inference="COORDINATES: protein motif:HMM:NF016200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015740 - C4-dicarboxylate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HEX2726477.1"
                     /translation="MSAPLTEPPQPAARPGYAGPRLAAAAEALALAGGILMLVVACLV
                     TLSVLMRWLAGDGIAGDFELVQIATGVGAFAFLPLCQARRGNVIVDTFTTRLPQRARD
                     GLDAVWDLTYAVLMAVIGWRLVIGAQDAFASHTTSMVLGIPQGYAVAACAVMGVFVAI
                     VAAATALRFLKARA"
     gene            complement(2739..>3066)
                     /locus_tag="VHN20_11715"
     CDS             complement(2739..>3066)
                     /locus_tag="VHN20_11715"
                     /inference="COORDINATES: protein motif:HMM:NF015445.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="C4-dicarboxylate ABC transporter"
                     /protein_id="HEX2726478.1"
                     /translation="IVFILAMNKARYASLPADLKQVIDNNSGQPAARMAAVPFDKMAV
                     EIPEVVKRKGGTIVTVPEAEAQRWEKATQPVIDNWIRQVKDRNVDGGKLLDTVRELIA
                     KYEKAA"
BASE COUNT          534 a         1057 c         1061 g          414 t
ORIGIN      
        1 cgacaaactc gaaagcctcg tgctgatggc gacctctgcc tatctgccgc ccgccgacct
       61 ctggaaccag agagcctcga cggtgcgcgc acaaggcatg gaggccatcg ccgacgcggt
      121 gttggcgcgc tggttcacga agccattcgc ggagcgcgct ccggcggtgg tggccgcgac
      181 gcgtaagcac ttcgtgtcga acaacgccga gggctacgct atctgctgcg aggcgatccg
      241 cgacatggat ctgcgtggcg tgatcggcgc catccgcacg ccgacgctga tcatcgccgg
      301 cgccgacgat ccggccacgc cggtcgcgat gatggaggac atccgcggcc gcatcccgga
      361 ttccgagctg atcgtcgtgc cgaaggccgc gcacctcctc aacatcgagc gccccgaggt
      421 ggtcaattcg catctcgagg cgttcctcgg gcgcttcgtg tcgaagcgca ccccgcgcgc
      481 cggcggcgtc tccttcgagg ccggcctcgc caaccgcaag agcgtgctcg gcgtcgagca
      541 tgtcgagcgc tcgctcgcca atgccggcgc cttcgccatg ccgtggcagg atttcatcac
      601 gcgcaatgcc tggggcgaga tctggggcga cccggcgctg ccgtggaaga cgcgctcgat
      661 gctgacgctg gcgatgatga tcgccctgca ccgcgaagag gagttcaagc tgcacgtgcg
      721 gccggcgctc aagaacggcg tcaccctcga ggagatgcgc gcgctgatcc tgcaggccgc
      781 catctacgcc ggcgtgcccg ccgccaacgc cgccttccgc tgggtcaagg aggtgctggg
      841 agcggagctc gaccgcgtct cgccgtagcg cgagcaactc tcccgcaagc gggagaaggg
      901 gttacgtcag ccaccgcacg agggcgaggc tgatggcggg aaatgccacg cagatcgaca
      961 ggcggatgat gtcggcggcg acgaagggca gcacgccgcg ataggtcttc acaatcggca
     1021 cgtcgcgcgc gatggcgctg accacgaaca cgttgagccc gatcggcggc gccgtgaggc
     1081 cgatgccgac gacgatcagg acgaggatgc cgaaccagat cgcgacgtcc tcggccggca
     1141 tgccgaaatc gagcgccgag acgatcggga agaacaccgg cagcgtcagc aggatcatgg
     1201 ccagctcgtc catcaccgcg ccgagcagga tataaaaggc gagcagcccg accaggatcg
     1261 cgtagggcgg cagcccggtc tcggcgaggg acgtcgccgc ataagtcggc agctgcgaca
     1321 gggccaggaa ggcgttgaag acctcggcgc cgagcaggat cgcgaagatc agcgcggcgg
     1381 tctccgcggt ctgcaggagg ctggtcttga tctcgcgcca cggcagggtg ccgcgcacga
     1441 cgccgatcac gaacatgccg acggcaccga ccgaggcacc ctcggttggc gtgaagatgc
     1501 cgccgtagat gccgcccacc acggcgagcg cgatcaccag cgccggccac accaggagga
     1561 gcccgcgcca gcgctcgcgg ctcggcaccg gcgcgtgcgg cggcgccgcc tccggattgc
     1621 gccgcaccac gatggcgatg acgatgcagt agaacagcgc cgcgagcagg cccgggaaga
     1681 gcgccgcctg gaacagcttt gcgatgttct gctcggtcga gatcgcatac acgaccagga
     1741 tcaccgacgg cgggatcagg atgccgaggg tgccgccgac cgcgatcacg cccgtggcga
     1801 gcccttcgcc gtaacggtag cggcgcagct ccggcagggc cgcgcgcccg aacgtcgccg
     1861 tggtcgcgac cgacgacccg cagatcgcgc cgaaacccgt gcaggcgccg atcaccgcca
     1921 tggcgagccc gccgcgcatg tggccgacga agccgcttgc ggccctgaac aggtcggtgg
     1981 cgagcccgga ccgttccgcg aaggccccca tgaggatgaa cagcggaatg accgacagcg
     2041 tgtagttgga gaacaggaaa tacggcgtcg tcttgatgta gttgaggaag gccggcaggc
     2101 tcgagagata gacgtagccg gcgctgccgg tgacgagcat tgccagcccg accggcatgc
     2161 gcgccgcgat cagcgcgagc atcaccacga agccgagcac ggccgccgcc atgccgctca
     2221 tgcgcgcgct ttcagaaagc gcaaagcggt cgccgccgcc acgatcgcca cgaagacgcc
     2281 catcaccgcg caggcggcga cggcgtagcc ctgcggaatg ccgagcacca tcgacgtcgt
     2341 gtggctggcg aaggcgtcct gcgcgccgat cacgagccgc catccgatga cggccatgag
     2401 gacggcgtag gtcagatccc agaccgcatc gagcccgtcg cgcgcccgtt gcgggagcct
     2461 ggtcgtgaag gtgtcgacga tgacgttgcc gcgccgcgcc tggcagagcg gcaggaacgc
     2521 gaaagcgccg acgcccgtgg cgatctgcac cagctcgaaa tcgccggcga tgccatcgcc
     2581 ggcgagccag cgcatcagca cgctgagcgt gacgaggcag gcgaccacca gcatgaggat
     2641 tccgccggcg agcgccagcg cctccgccgc cgccgcgaga cgcggcccgg cgtagcccgg
     2701 gcgcgccgca ggctgcggcg gctccgtcag cggcgcgctc acgcggcctt ctcgtatttc
     2761 gcgatcagct cgcgcacggt gtcgagcagc ttgccgccgt cgacgttgcg gtccttcacc
     2821 tgcctgatcc agttgtcgat caccggctgc gtcgccttct cccagcgctg cgcttcggct
     2881 tccggaacgg tcacgatggt gccgcccttg cgcttgacca cctcggggat ctccacggcc
     2941 atcttgtcga acggcaccgc ggccatgcgc gccgccggct ggccggagtt gttgtcgatc
     3001 acctgcttca ggtcggcggg caggctggcg tagcgcgcct tgttcatggc gaggatgaaa
     3061 acgatc
//
LOCUS       DATAIQ010000708         2033 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_406344, whole genome shotgun sequence.
ACCESSION   DATAIQ010000708 DATAIQ010000000
VERSION     DATAIQ010000708.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2033)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2033)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2033
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_406344"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1047
                     /locus_tag="VHN20_11720"
     CDS             <1..1047
                     /locus_tag="VHN20_11720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEX2726479.1"
                     /translation="TPWNYPLHQISAKVAAAFAAGCTVVLKPSELVPGVAYLLAEVID
                     AAGLPPGVFNLVMGRGSVVGETILKHPDVSAISFTGSVETGRKVAAACVASVPMKKLQ
                     LEMGGKNPLVVLDDADLNTAVECAVNGAFFSTGQRCTASSRLIVTEGIHKKFVDAVGE
                     RMKALVVDDALKPGTQIGPVVDQNQLDQDLSYIRIGQDEGAKLVAGGELLNRATPGFY
                     LAPALFTDVTNSMRIAREEIFGPVASVIRVKDYEEALEVANDTAFGLSAGICTSSLKH
                     AGHFKRNSEAGMVMVNLPTAGVDYHVPFGGRKGSSYGPREQGRYAAEFYTTVKTAYTF
                     DLNGPYVPKTRASE"
     gene            1135..1899
                     /locus_tag="VHN20_11725"
     CDS             1135..1899
                     /locus_tag="VHN20_11725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018325000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HpcH/HpaI aldolase/citrate lyase family protein"
                     /protein_id="HEX2726480.1"
                     /translation="MELPVNHFKRALKAGRSQIGFWCSLASNVSVEILAGSGFDWLVL
                     DTEHSPNELPMVFNQLQAVMENRVQPVVRPPWNDMVILKRYLDAGVQSFLIPMVQSEE
                     EARNAVAYTRYPPRGVRGFAGASRSSRFGRIENYHKRCEEEICVLVQIETQAGLDNLE
                     AIARVEGVDGVFIGPGDLSAALGHLDDQHHPQVRRVIEDAIQRIAACGTAPGILTGDE
                     AFARRCIEIGCLFTAVGSDSGLLARGSEQIARKFKE"
     gene            1926..>2033
                     /locus_tag="VHN20_11730"
     CDS             1926..>2033
                     /locus_tag="VHN20_11730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018011602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxypyruvate isomerase"
                     /protein_id="HEX2726481.1"
                     /translation="MPRFAANLSMLFTELPFLDRFAAAAKAGFAGVEYLF"
BASE COUNT          333 a          700 c          677 g          323 t
ORIGIN      
        1 acgccgtgga actacccgct gcaccagatc tcggcgaagg tcgccgccgc cttcgcggcc
       61 ggctgcaccg tcgtgctcaa gccgtccgag ctcgtcccgg gcgtcgccta cctgctcgcc
      121 gaggtgatcg acgcggccgg cctgccgccg ggcgtcttca acctggtgat ggggcgcggc
      181 tcggtggtcg gcgagaccat cctcaagcac cccgacgtga gcgcgatctc gttcaccggc
      241 tcggtcgaga ccgggcgcaa ggtcgccgcc gcgtgcgtcg cctcggtgcc gatgaagaag
      301 ctgcagctcg agatgggcgg caagaatccg ctcgtcgtgc tcgacgacgc tgacctcaac
      361 accgcggtcg agtgcgccgt caacggcgcc ttcttctcga ccgggcagcg ctgcaccgcg
      421 tcgtcgcgcc tgatcgtcac cgagggcatc cataagaaat tcgtcgacgc ggtcggcgag
      481 cgcatgaagg cgctcgtggt cgacgacgcc ctcaagccgg gaacccagat cggccccgtg
      541 gtcgaccaga accagctcga ccaggacctg tcctacatcc gcatcggaca ggacgagggg
      601 gcgaagctgg tggccggcgg cgagcttctc aaccgcgcca cgcccggctt ctatcttgcg
      661 ccggcgctgt tcaccgacgt gaccaactcg atgcgcatcg cccgtgagga aatcttcggg
      721 ccggtggcga gcgtgatccg cgtcaaggac tacgaggaag cgctcgaggt cgccaacgac
      781 accgcgttcg gcctgtcggc gggcatctgc acgtcgagcc tcaagcatgc cggccatttc
      841 aagcgcaaca gcgaggccgg gatggtgatg gtcaacctgc cgacggcggg cgtcgactac
      901 cacgtgccgt tcggcggccg caaaggctcg tcctacggcc cgcgcgagca ggggcgctac
      961 gcggccgagt tctacaccac ggtcaagacc gcctacacgt tcgacctcaa cgggccttac
     1021 gtgccgaaga cgcgggcgag cgaatagagc ctctcaccgc ttgcggggag agggagacat
     1081 tgactccgtc acccgcgatc ctgaagctcg cagggtgtgt ggaggaggtg ccccgtggaa
     1141 ctgcccgtca accacttcaa gcgcgcgctc aaggccggcc gctcgcagat cggcttctgg
     1201 tgcagcctcg ccagcaacgt ctcggtcgag atcctggcgg gctcgggttt cgactggctc
     1261 gtgctcgaca ccgagcactc tcccaacgag ctgccgatgg tcttcaacca gctgcaggcg
     1321 gtgatggaga accgcgtgca gccggtcgtg cggccgccgt ggaacgacat ggtgatcctc
     1381 aagcgctacc tcgacgcggg cgtgcagagc ttcctgatcc cgatggtgca gagcgaggag
     1441 gaggcgcgca acgcggtcgc ctatacccgc tatccgccgc gcggcgtgcg cggcttcgcc
     1501 ggcgcgtcac gctcgtcgcg gttcggccgc atcgagaatt accacaagcg ctgcgaggag
     1561 gagatctgcg tgctcgtgca gatcgagacg caggccggcc tcgacaacct cgaggcgatc
     1621 gcccgcgtcg aaggcgtcga cggcgtgttc atcggccccg gcgacctctc cgccgcgctt
     1681 ggccatctcg acgaccagca tcatccccag gtgcggcgcg tgatcgaaga cgcaatccag
     1741 cgcatcgcgg cgtgcggcac ggcgcccggc atcctgaccg gcgacgaggc ctttgcccgg
     1801 cgctgcatcg agatcggctg cctgttcacg gccgtcggct ccgattccgg cctgctggcg
     1861 cgcggctccg agcagatcgc gcgcaagttc aaagaatagg attcgccgat ccaggggagg
     1921 caaaggtgcc gagattcgcc gccaatctgt cgatgctgtt caccgagctg ccgttcctcg
     1981 accgcttcgc tgcggccgcg aaggccgggt tcgcgggcgt cgaatatctt ttc
//
LOCUS       DATAIQ010000709         2343 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_201385, whole genome shotgun sequence.
ACCESSION   DATAIQ010000709 DATAIQ010000000
VERSION     DATAIQ010000709.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2343)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2343)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2343
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_201385"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..205)
                     /locus_tag="VHN20_11735"
     CDS             complement(<1..205)
                     /locus_tag="VHN20_11735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018648196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HEX2726482.1"
                     /translation="MSSVLASEALGQWRPSQRYPDPAVESLDAGFNKYRIATAAVERI
                     ATGMRWAEGPIWIGDGRCLLWSDI"
     gene            364..1410
                     /locus_tag="VHN20_11740"
     CDS             364..1410
                     /locus_tag="VHN20_11740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009209230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEX2726483.1"
                     /translation="MGSVPTMSDRLRVAVVGLGMAHKPHLQSLRELGDVVEIAACHAP
                     SAARREAFAQANPDLPVAADLDEVLRDDTIGAVILLTPPTTHLGLVERCAAAGKHVLL
                     EKPVEVSVERATRAVEIMDEAGLVFGVVLQHRFRAAARRLRELIRGGEPGELVSASAS
                     IRWWRPPEYFAQAGRGMKARDGGGVLLTQAIHTLDLFQSLTGPVTRIAAIAKTSPLRS
                     IDTEDVAAAAVEFHNGAAGTIDATTVAYPGFPERIELACVNATAVLVAESLDVFWKDG
                     RHDQLAGSSAGGGGADPMAFSHEAHKALIGDFVDAVRRRRQPLVSGREAVKVQVLIEA
                     LLRSSAEGRAVTIS"
     gene            complement(1420..>2343)
                     /locus_tag="VHN20_11745"
     CDS             complement(1420..>2343)
                     /locus_tag="VHN20_11745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018648215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HEX2726484.1"
                     /translation="EAQRQEGYDDSFSVAITAVSAVLAVIIPPSILMIVWGGILTVSI
                     GALFLAGIIPGLLIGFVQMGTVHAYAKLRGYPTYPRSTWKELGYWLFVSIPALTTPAI
                     IVGGKIFGWFTATESACIAVLYAAMLSLLVYREMDLKGLHFALLDTGKLAAIALFCVG
                     TASAFGWLLAYYQIPKAILAGVSGWGMGLTATGFFIAFVFLVVGCFLDAIPAIIIVGT
                     ILDPLAKAVGMDPVHFAMIGIVSLAFGLVTPPYGLCLMISCAVAGIRMTEAIKDTCIM
                     LLPMLGVLALLIVWPDVALFLPRLISPEFLR"
BASE COUNT          417 a          789 c          791 g          346 t
ORIGIN      
        1 ggatgtcgct ccacaagagg cagcggccgt cgccgatcca gatcgggcct tcagcccagc
       61 gcatgccggt ggcgatgcgt tccaccgccg ccgtggcgat gcggtatttg ttgaagcccg
      121 cgtcgagcga ctcgacggcc ggatcggggt agcgctggct cgggcgccat tggccgaggg
      181 cttccgaggc aaggacagac gacatcgcag ctgctccagt caaaaaggtt cgcttcgtca
      241 ggttcatggc ccctccccgg cggcaagcgc ccgttgcgag gctgcatggg cgtcccgcca
      301 tcctcgtgca gagtgcgtcc ttgaccttgc cggcattatc gacacagtcg acggaaaccg
      361 tccatggggt ctgtcccgac aatgagcgat cgtctgcgtg ttgccgtcgt cgggctcggc
      421 atggcccaca agccgcacct gcagagcctg cgcgaactgg gcgacgtcgt cgagatcgcc
      481 gcctgccacg ctccgagcgc cgcccgccgc gaagctttcg ctcaagcgaa tccggacctg
      541 ccggtcgccg ccgatctcga cgaggtcctg cgcgacgata ccatcggcgc cgtcatcctg
      601 ctgaccccgc ccaccacaca tctcgggctg gtcgagcgct gcgccgccgc cggcaagcac
      661 gtcctcctgg aaaaaccggt cgaggtgtcg gtcgagcggg cgacgcgggc ggtcgagatc
      721 atggacgagg ccggactcgt cttcggcgtc gtgctgcagc atcggttccg cgccgccgcg
      781 cgccggctgc gcgagctgat ccggggcggc gagcccggcg agctggtctc ggcctccgcc
      841 tcgatccgct ggtggcgccc gccagagtat ttcgcgcagg cgggccgcgg catgaaggcc
      901 cgcgacggcg gcggggtgct gctgacccag gcgatccaca cgctcgacct gttccagagc
      961 ctcacgggac cggtcacgcg catcgccgcc atcgccaaga cgtccccgct ccggtccatc
     1021 gacacggaag acgtcgccgc ggcggcggtc gagttccaca acggcgccgc cggcaccatc
     1081 gatgcgacca ccgtcgccta tcccgggttt ccggagcgga tcgagcttgc atgtgtcaac
     1141 gccaccgccg tgctggtcgc cgagagtctc gacgtgttct ggaaggacgg ccgtcacgac
     1201 cagctcgccg gcagctccgc gggcggcggc ggcgccgacc cgatggcctt ctcgcacgag
     1261 gcccacaagg cgctgatcgg cgatttcgtc gacgccgtca ggcgccggcg ccagccgctg
     1321 gtgagcggcc gggaggccgt caaggtgcag gtgctgatcg aggcgctgct gcgctcgtcc
     1381 gcggaaggcc gcgcggtgac aatctcgtaa ctgttgtcat tagcgcagga actccggcga
     1441 gatcagcctg ggcaggaaca gggccacgtc cggccagacg atcaggagcg ccaggacgcc
     1501 gagcatcggc agcagcatga tgcacgtatc cttgattgcc tcggtcatgc ggatgcccgc
     1561 caccgcgcag gagatcatca ggcaaagccc gtatggcggc gtgaccagcc cgaaggccag
     1621 ggagacgatg ccgatcatgg cgaaatggac cgggtccatg ccgactgcct tggcgagcgg
     1681 gtcgaggatc gtgccgacga tgatgatggc cggaatggcg tcaaggaagc agccgaccac
     1741 gagaaagacg aaggcgatga agaacccggt tgcggtcagc cccatgcccc agcctgaaac
     1801 cccggcgagg atggccttcg ggatctggta ataggcgagg agccagccga acgcgctcgc
     1861 ggtgccgaca cagaacagcg cgatcgccgc cagcttgccg gtgtcgagca gcgcgaaatg
     1921 cagacctttg aggtccatct cgcgatagac cagcagcgaa agcatcgctg catagagcac
     1981 ggcgatgcag gcggattctg tggccgtgaa ccagccgaag atcttgccgc cgacgatgat
     2041 cgccggtgtc gtcagcgcgg ggatcgaaac gaacagccag tagccgagct ccttccaggt
     2101 cgagcgcgga taggtcggat agccgcgcag cttcgcatag gcatgcacgg tccccatctg
     2161 tacgaagccg atcagcaacc cgggaatgat gccggcaagg aacagcgccc cgatcgagac
     2221 cgtgagaatg ccgccccaca cgatcatcag gatcgacggc gggatgatca cggcgagtac
     2281 cgccgagacg gccgtgatgg ccaccgaaaa gctgtcgtcg taaccctcct gccgctgcgc
     2341 ctc
//
LOCUS       DATAIQ010000710         7844 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_36689, whole genome shotgun sequence.
ACCESSION   DATAIQ010000710 DATAIQ010000000
VERSION     DATAIQ010000710.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 7844)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7844)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7844
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36689"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            111..506
                     /locus_tag="VHN20_11750"
     CDS             111..506
                     /locus_tag="VHN20_11750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726485.1"
                     /translation="MASRALVFAGAALLLGLAAPSAFADAPPEAKGVARRSVERVQVQ
                     RVVRHTRRHHVYRTRAWDGRYGHYPRRHYFVDGLPTPNPFGSSVGVVSGGWTYYTPGP
                     AVVWYPYSDRDSVVTVYPRPVHRPFCDCY"
     gene            complement(500..1363)
                     /locus_tag="VHN20_11755"
     CDS             complement(500..1363)
                     /locus_tag="VHN20_11755"
                     /inference="COORDINATES: protein motif:HMM:NF024258.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase family protein"
                     /protein_id="HEX2726486.1"
                     /translation="MRTRAHLTLDGPVLFFGGPYSNLEATRAVLAEAERRRIPPERVV
                     CTGDVVAYGADAQATVDVVRQSSIHVVMGNCEEALAQGASDCGCGFAPGSACDRLSAA
                     WFAHADGELGTEARAWMAALPHRLDVEIAPAGVTLTVVHGSLTEINRFVFASTSHEVK
                     AGDLVHCGTDGIVAGHCGLPFTQIIDRRLWHNPGAVGMPANDGTPRAWFSVITCGAER
                     GSLHIEHLALAYDHAAAAAKLREARLPEGYADALSSGLWPSCDVLPPAELAARGHPLK
                     AAALSWSVSTQ"
     gene            complement(1447..1548)
                     /locus_tag="VHN20_11760"
                     /pseudo
     CDS             complement(1447..1548)
                     /locus_tag="VHN20_11760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562364.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
     gene            1982..2107
                     /locus_tag="VHN20_11765"
     CDS             1982..2107
                     /locus_tag="VHN20_11765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726487.1"
                     /translation="MLAHFSTARAAQAVRAATHVPVLTSPDAAVAKLKRLIAAAG"
     gene            2119..3390
                     /gene="otnK"
                     /locus_tag="VHN20_11770"
     CDS             2119..3390
                     /gene="otnK"
                     /locus_tag="VHN20_11770"
                     /EC_number="2.7.1.217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019965617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxo-tetronate kinase"
                     /protein_id="HEX2726488.1"
                     /translation="MLLGVIADDFTGASDIANTLAKGFGGGGLRTTQFLGVPQRPAPA
                     SCDAGVVALKSRSIAADEAVAQSLAALRWLQDQGCRQFVFKYCSTFDSTSAGNIGPVG
                     EALAEALGVAGVPACPAFPAAGRTVYQGHLFVGDRLLSETSLRTHPLNPMTDPDIRRW
                     LALQSKRPVGLVPYATVAKGATALGAALDEAAGRGECLVIVDALTEADLLAIGAACAD
                     RPFLTGGSGIAIGLPRNFIGKGLAEAAQPAFEGVRGPEAILAGSCSGATLGQIALHRE
                     KHPALNVAVDDVLAGALRAEQLVAFVETHRGSEPLIYSSEPPERVAASQQRHGAAKVA
                     HAIESLFAETARALVDAGVRRLVVAGGETSGAVVSALDIDALEIGPEIDPGVPVVIAR
                     GDRTLALALKSGNFGAPDFFSKALRSLGGPA"
     gene            3387..4025
                     /gene="otnC"
                     /locus_tag="VHN20_11775"
     CDS             3387..4025
                     /gene="otnC"
                     /locus_tag="VHN20_11775"
                     /EC_number="4.1.1.104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017956779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA];
                     GO_process: GO:0005996 - monosaccharide metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxo-tetronate 4-phosphate decarboxylase"
                     /protein_id="HEX2726489.1"
                     /translation="MTEHETRELLARLARSLFERGYAVGSAGNISVAVDDGILITPTN
                     SCLGFLDPARISKIDRAGRHLSGDKPSKEVFLHQAFYDTRAGTGAVVHLHSTYATALS
                     CLDDVDADDAIPPLTPYVVMRVGRVKLLPYARPGDPKLGDMIRALGGSHAAVLLANHG
                     PVVAAGDLTSAVYASEELEETAKLVVILRGQRTRQLTQEQIADLVGTFGTPP"
     gene            complement(4182..6386)
                     /locus_tag="VHN20_11780"
     CDS             complement(4182..6386)
                     /locus_tag="VHN20_11780"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0035556 - intracellular signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEX2726490.1"
                     /translation="MQDLPMERTGRPLPAAGVASSGEPQERRGRSPRVRIHIALTVLL
                     AAVSFGIAGGMLVVQIDGSRNIIRDSAFAYMDAVAVRVVDRTAALVDPVSNVLHVLAT
                     RPALLETTTPADRMVVPGFVEALRQFDDAYGMLVGYADGNFLWVESLRVVPPSLHVGF
                     DAPETAAYRLTEIRRDGDHRVQRRWWLDAGGARLAEIDVAIDPPYDPRTRPWYRDAHA
                     EDAPRISPVYMFAALQTPGYTVRVPLAGNVDGVLATDILLSSVEAFLKAQRVSPNGRV
                     VLLDDRDQVVASGVSELLERGRAESPGEPTTPPMLSTLGYPALEAAVAQWRRTGEGHI
                     AVVQDGRTYIASIHSMGAGFRHGMYVAVIAPLDEFFGAIEALRLRMLLYAGGIALVAL
                     PIAVLLGRRIARQLRAIAEEAGRIRQLELTATAPLSSRIIEVDQLARSIERTKLVVRD
                     FAHFVPRRLVEQLVSSGTSLALGGERRELTILFTDVVGFTSLAERADPATLMRQASRY
                     LGTLSNAISAHGGTIDKYIGDSIMAFWNAPSSDPDHVAHACEAILACRGAGRQLDDAF
                     AAEGWPPMRTRYGLHVGEVIVGNIGSADRMSYTALGPAVNLASRLEALNTRYGTDVLV
                     SEMVATRCRDRFIFRRVDRVQPKGLTQSLMVFTLIGSTIDPTAAERLALWTDVLAAYD
                     WRDWPATLRKLEHYRSADPDDPVAVVYLERCRQFLEAPPPESCEVVAAYDEK"
     gene            6559..7029
                     /gene="ybaK"
                     /locus_tag="VHN20_11785"
     CDS             6559..7029
                     /gene="ybaK"
                     /locus_tag="VHN20_11785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011665537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0002161 - aminoacyl-tRNA editing activity
                     [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Cys-tRNA(Pro) deacylase"
                     /protein_id="HEX2726491.1"
                     /translation="MSKVTRATQALDKAGVAYAVFTYDYDPDADRIGVQAAESLGVDS
                     GMVLKTLMAEVDGKPVCVLIRSDREVNMKKLAAAFRGKSAGMMTPASAERATGYHVAG
                     ISPFGQKRGHPIAVDEAALAADAVFVNGGQRGLQLRLAPPDLVKALGALTAPLS"
     gene            complement(7190..7375)
                     /locus_tag="VHN20_11790"
     CDS             complement(7190..7375)
                     /locus_tag="VHN20_11790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726492.1"
                     /translation="MDYRRHAEECRALAKQMKMGEQRDQLLKMAETWETLASERQRTL
                     RVGRQAGATPDDDEVGR"
     gene            complement(7456..>7844)
                     /locus_tag="VHN20_11795"
     CDS             complement(7456..>7844)
                     /locus_tag="VHN20_11795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="homoserine acetyltransferase"
                     /protein_id="HEX2726493.1"
                     /translation="RDTFGRAPANPDKDPADALEHPFRIEAAVRLAAAARAALADANN
                     FLYMVRANQLACADPAKITTPALIVSSPTDLVFPAEWIARTVAAIRGNGTRVETATLT
                     GPLGHLNGLQYIAQAAGPVAQFLDER"
BASE COUNT         1229 a         2698 c         2679 g         1238 t
ORIGIN      
        1 ccctggcggc ttcgggccaa accgtcagga ttcacggtaa atcccggtaa tcgttgagct
       61 tgtccaggca ggcgctagct tgggcgcatt ctgttcggag atttaagtca atggccagtc
      121 gggctttggt tttcgctggg gcggcactgc ttctcggcct cgccgcacct tcggcttttg
      181 cggacgcccc gccggaggcc aaaggcgtcg cccggcgctc cgtcgagcgc gttcaggtgc
      241 agcgggtcgt gcgccacacg cgccggcatc acgtctaccg gacgcgcgcc tgggacggcc
      301 gctacggcca ctatccgcgc cgccattatt tcgttgatgg cctccccacg cccaaccctt
      361 tcggcagcag tgtcggcgtg gtctccggcg ggtggacgta ttacacgccc ggcccggccg
      421 tcgtctggta tccctacagc gaccgcgaca gcgtcgtcac ggtctatccg cgcccggtcc
      481 accggccgtt ttgcgactgc tactgagtcg acacggacca gctgagagcc gccgccttca
      541 ggggatggcc gcgcgccgcc agctcggcgg ggggcagcac gtcgcagctc ggccacaacc
      601 cgctcgacag cgcgtcggca tagccctcgg ggagacgtgc ttcacgcaac ttcgccgccg
      661 cggcggcgtg gtcgtaggcg agcgcgagat gctcgatgtg cagcgagcct cgctcggcgc
      721 cgcaggtgat cacgctgaac cacgcgcgcg gggtgccgtc attcgccggc atcccgacgg
      781 cgcccggatt gtgccagagc cggcggtcga tgatctgcgt gaacggcagc ccgcagtgac
      841 cggcgacgat gccgtccgtg ccgcaatgca cgagatcgcc ggccttcacc tcgtgtgacg
      901 tcgaggcgaa gacgaagcgg ttgatctcgg tgaggctgcc gtggacgacg gttagcgtca
      961 cgcccgccgg cgcgatctcg acgtcgagac ggtgcggcag cgccgccatc catgcccgcg
     1021 cctcggtgcc gagctcgccg tcggcgtgcg cgaaccacgc ggccgagagg cggtcgcagg
     1081 cgctgccggg ggcgaagccg cagccgcaat ccgacgcgcc ctgggcgagc gcctcctcgc
     1141 aatttcccat caccacgtgg atgctggact ggcgcacgac atcgacggtc gcctgcgcgt
     1201 cggcgccata ggcgacgacg tcgccggtgc acacgacgcg ctccggcggg atgcgccggc
     1261 gctcggcttc cgcgagcacc gcgcgcgtcg cctcgagatt cgaatacggg ccgccgaaga
     1321 agagcacggg gccgtccagc gtcaggtgcg cacgcgtcct catcgatacg tcggcagcct
     1381 cctcgttttg ctcgcgcgcg atcaggtcga ggatcttaag gtgttcacgg cagtccgctc
     1441 ctgatctcac gacttgacgg gcccgatgct cttcagcacg acgcgcacct gctcctcccc
     1501 caggaaagct gggaactgat cgcccggcag gtagtagtct tcccatccgc catgccgcag
     1561 gtgacctaag cccttgtcgc taatcgcaac ctcccagcat tttgctgaat ttaggggagg
     1621 ggagattgca tataggcaac caaaaaagca aaggtatgac gtggccgcgg acgggtcggg
     1681 cctccggcgc cgcatctgcg ttgcgagtgg tttcttcccg ccccgcgctc aagccgaacg
     1741 aggccatgtt cgaagccgct cttgagcgcg gcgccaacat cggcatgatt gcaacgttcc
     1801 aaccggcgaa ggccagcatg gaagcagagt tcgcggaaga ggcgcgccgg gtcgccccgg
     1861 cagcgcggtt gtcgacccag gtcgtcgaga cggcgatgac ggccctgcgc gccggcgacg
     1921 cggcgacgca taaccacctc gtggccaagg ccgccgcccg catgccggct gtcgatgcat
     1981 cgtgctggcg catttctcga cggcccgcgc cgcgcaggcg gtcagggcgg cgacgcatgt
     2041 gccggtgctg acgagcccgg acgcggcggt ggcaaagctc aagcgcctga tcgcggcggc
     2101 aggctgaagg cggatcgcat gctcctcggc gtcatcgctg acgatttcac cggcgcgagc
     2161 gacatcgcca acacgctcgc caagggattt ggcggcggcg gcctcaggac gacgcagttc
     2221 ctgggcgtgc cgcagcggcc ggcgcccgcg tcctgcgacg ccggcgtggt ggcattgaag
     2281 agccggtcga tcgccgccga cgaagcggtc gcccagtcgc tcgccgcgct gcgctggctt
     2341 caggaccagg gttgccggca gttcgtcttc aaatactgct cgaccttcga ttcgacgtcc
     2401 gccggcaata tcggcccggt gggggaggcg ctggccgaag cgctcggcgt cgccggcgtc
     2461 ccggcatgtc ccgcctttcc ggcggccggg cgcaccgtct accagggcca cctgttcgtc
     2521 ggcgaccgcc tcttgagcga gacgagcctg cgcacgcacc cgctcaaccc gatgaccgat
     2581 ccggacatcc ggcgctggct cgcgctgcag agcaagcggc ccgtcggcct cgtcccgtac
     2641 gcgacggtcg ccaaaggcgc gacggccctc ggtgcggcgc tcgacgaggc agccggccgc
     2701 ggcgagtgcc tggtcatcgt cgatgcgctg accgaggcgg acctcttggc gatcggcgcg
     2761 gcctgcgccg accgcccgtt tctcaccggc ggctccggca tcgccatcgg gctgccgcgg
     2821 aacttcatcg gcaagggcct ggccgaggcg gcgcagcccg ccttcgaggg cgtgcgcggc
     2881 cccgaagcga tcctcgccgg aagctgctcc ggcgcgacgc tcgggcagat cgccctgcac
     2941 cgcgaaaagc atccggcgct gaacgttgcc gtcgacgacg tgctggcggg cgccttgcgc
     3001 gccgagcagc tcgtggcctt cgtcgaaacg catcgtggca gcgagccgct gatctattcg
     3061 tcggagccgc cggagcgcgt cgccgcgtcg cagcagaggc atggcgctgc gaaggtcgct
     3121 cacgccatcg agtcgctgtt cgccgagacg gcgcgggcgc tcgtcgatgc cggcgtgcgg
     3181 cgcctcgtcg tcgccggcgg cgagacgtcg ggcgcggtcg tgtccgcgct cgacattgac
     3241 gccctcgaga tcggcccgga gatcgacccg ggcgttccgg tggtgatcgc gcgcggcgat
     3301 cgcacgctgg cgctggcgct caagtccggc aatttcggcg ccccggactt tttctcgaag
     3361 gctctgcgca gcctcggagg tccggcgtga cggagcacga gacccgcgag cttctggccc
     3421 ggctcgcccg ctccttgttc gagcgcggct acgcggtcgg ctccgccggc aacatcagcg
     3481 tcgccgtcga cgacggcatc ctgatcacgc cgaccaactc ctgcctcggc ttcctcgacc
     3541 cggcgcgcat ctccaagatc gaccgggcag ggcggcatct gtccggcgac aagccatcga
     3601 aggaggtgtt cctgcaccag gccttctacg acacgcgcgc gggcacgggc gcggtcgtgc
     3661 atctgcactc cacctacgcg accgccttgt cgtgcctcga tgacgtcgat gcggacgacg
     3721 cgatcccgcc gctcacgcct tacgtggtga tgcgcgtcgg ccgcgtgaag ctgctccctt
     3781 acgcgcggcc gggcgacccg aagctcggag acatgatccg cgccctcggc ggctcgcacg
     3841 ccgccgtgct tctcgccaac catgggccgg tggtggcggc cggcgacctg acctcggcgg
     3901 tctacgcgtc cgaggagctg gaggagaccg cgaagctcgt cgtgatactg cgtggccagc
     3961 gcacgcggca gctgacccag gagcagatcg ccgaccttgt cgggaccttc ggcacgccac
     4021 cgtgagtctt gccgtcacgt ggcgcggtta ggacacacca ttgcatcgat gccaaacaag
     4081 agagagtggg atcgatcaat ctgaattgat cccgctcccg aggattccac gtgggtggaa
     4141 acggctctgg ggcgcgttcc gcaatgcgca cgagtcgacg ttcacttctc gtcgtaggcg
     4201 gcgacaacct cgcagctctc gggcggcggc gcctccagga actggcggca gcgctccagg
     4261 tagaccacag cgacagggtc gtcgggatcc gcgctgcgat aatgctcgag ctttcgcaag
     4321 gtggcgggcc agtcacgcca gtcataggcg gcgagcacgt cggtccagag cgcgagccgc
     4381 tccgcggcgg tcgggtcgat cgtcgagccg atcagcgtga acaccatcag ggattgcgtc
     4441 agacccttgg gctgtacgcg atcgacgcgc cggaagatga agcggtcgcg acagcgggtc
     4501 gcgaccattt cgctgaccag cacgtcggtg ccgtagcgcg tgttgagagc ctccagtcgc
     4561 gacgccagat tcacggcggg gcccagcgcc gtgtaactca tgcggtcggc cgatccgatg
     4621 ttgccgacga tgacctctcc gacatgaagg ccatagcgcg tccgcatcgg cggccagccc
     4681 tcggcggcga acgcgtcatc gagttgccga cccgccccgc ggcaggcgag gatcgcctcg
     4741 caggcatgcg cgacgtggtc gggatcggat gacggcgcgt tccagaacgc catgatcgag
     4801 tcgccgatat atttgtcgat ggtcccgccg tgggcggaaa tggcgttcga cagggtgccg
     4861 agatagcgcg acgcctggcg catcagcgtg gcaggatcgg ctcgctcggc gagcgaggtg
     4921 aatccgacca cgtcggtgaa aagaatcgtc aactcgcgcc gttccccgcc aagcgccagc
     4981 gacgtcccgc tcgagacgag ctgctcgacg aggcggcgtg gcacgaaatg cgcaaagtcg
     5041 cggacgacca gcttggtccg ctcgatcgac cgcgcaagct gatcgacctc gatgatgcgc
     5101 gacgacaggg gcgccgtcgc tgtcaactcc agctgccgga ttctgccggc ctcctcggcg
     5161 attgcgcgaa gttgtcgtgc gatgcggcgt ccgaggagaa cggcgatcgg cagggcgacg
     5221 agcgcgattc cgccagcgta aagaagcatg cgcaggcgca aagcctcgat cgcgccgaag
     5281 aactcgtcga gcggagcgat gacggcgacg tacatgccgt gtcggaagcc tgcgcccatg
     5341 gagtggatgg acgcgatgta ggtgcggccg tcctggacga cggcgatgtg gccttccccg
     5401 gtgcggcgcc attgcgcgac cgccgcctcg agcgcggggt acccgagcgt gctcagcatt
     5461 ggcggcgtcg ttggctcgcc gggcgattcc gcacgcccgc gctcgagaag ctcggaaaca
     5521 ccgcttgcca cgacctggtc gcggtcgtcc agcagcacca cgcggccgtt cgggctcacc
     5581 cgctgcgcct tgagaaaagc ctcgaccgag ctcagcagga tgtccgtcgc caggacgcca
     5641 tcgacgttgc cggcgagcgg aacgcggacc gtatatccgg gtgtttgcaa ggccgcgaac
     5701 atgtagaccg gcgaaatgcg cggcgcgtcc tcggcgtgtg catcgcggta ccaaggccgg
     5761 gttcgcggat cgtagggtgg gtcgatcgcc acgtcgattt cggcgagccg cgcgccgccg
     5821 gcgtcgagcc accaccgccg ctggacgcgg tggtcgccgt cacgtcggat ctcggtgagc
     5881 cgataggcgg cagtttccgg cgcatcgaac ccaacgtgta acgacggcgg aacgaccctc
     5941 agcgattcga cccagaggaa attgccgtcg gcatagccaa caagcatgcc gtaggcgtcg
     6001 tcgaactgac gcagcgcctc gacaaacccc ggaacgacca tgcgatcggc cggggtggtc
     6061 gtttcgagca gagccggtcg cgtcgcgagg acatggagga cgttgctgac gggatcaacc
     6121 agggcggcgg tacgatcgac gacgcggacg gcgaccgcgt ccatgtaggc gaaggcggaa
     6181 tcccggatga tgttgcgcga tccatcgatc tgcacaacaa gcatgcctcc ggcgatgccg
     6241 aaactgactg ctgcgagcag cacggtgagc gcgatatgga tgcggacgcg gggagagcgg
     6301 ccgcgccgct cctgcggttc accgctcgac gccacccctg cagccggcaa tggccgcccc
     6361 gtccgctcca taggcagatc ctgcatccag ccgctcgtcg tagatactac accatctgcc
     6421 cgcgggcgac ctgtcgaagc ccgatgcagc ccctgcaggt cgggcctctc gcgatgatcg
     6481 cttctcgcgc cgcctcggct ttgggcggcg ttgactgccg gccccggccc aaggaaagag
     6541 agggggggag gggaatcgat gtcgaaggtc acgcgggcga cacaggcgct cgacaaggcc
     6601 ggcgtcgcct acgcggtctt cacctacgac tacgatcccg acgccgaccg catcggcgtg
     6661 caggcggccg aaagcctcgg cgtcgattcc ggcatggttc tcaagaccct gatggcggag
     6721 gtcgacggca agccggtctg cgtgctgatc cgctcggatc gcgaggtcaa catgaagaag
     6781 ctggcggccg cgttccgcgg aaaatcggcc ggcatgatga cgccggcgtc ggccgagcgc
     6841 gcgacgggtt atcacgtcgc cggcatcagc ccgttcggcc agaaacgcgg ccacccaatc
     6901 gcggtcgacg aggccgcgct cgccgccgac gccgtgttcg tgaacggcgg ccagcgcggg
     6961 cttcagctgc ggctggcccc gcccgacctc gtcaaggcgc tcggcgcgtt gaccgcgccg
     7021 ttgtcgtgat cctcatcttg catgcgcgtc gcgtgagctt tggcacatct tgcaacgcgt
     7081 cgaccgacct agcttgcccg cgcgaggcat aaccatccca agcttcgcca actcgccccg
     7141 tccagccctc ccgctcgacg gggctttttt tgcgccagca tggcgctgat cagcgcccga
     7201 cctcgtcgtc gtcgggtgtc gcgccggcct ggcgcccgac ccgcaacgtc ctctgccgct
     7261 cgctggccag ggtttcccat gtctcggcca tcttgaggag ctggtcgcgc tgctccccca
     7321 tcttcatctg cttggcgagc gcacggcact cttccgcatg ccgtcggtag tccatgactg
     7381 ttttcaccgg cgatccccct tgccgccagc ttgtgagctg accagacaag cttggcaata
     7441 acaagcgtca aatcctcacc gctcatccag aaactgggcg acggggccgg ccgcctgggc
     7501 aatgtattgc aggccgttga ggtgcccgag cggacccgtg agcgtggcgg tctcaacgcg
     7561 ggtcccgttg ccgcgaatcg ccgccaccgt gcgcgcgatc cactcggcgg gaaagacgag
     7621 atcggtcggc gacgagacga tcagcgccgg cgtcgtgatc ttcgcgggat cggcgcaggc
     7681 gagctggttg gcgcgcacca tgtagagaaa attgttggca tcggcgagcg ccgcccgcgc
     7741 cgccgcggcc agccgcaccg ccgcctcgat cctgaaggga tgttccagtg catccgcggg
     7801 gtccttgtcc gggttggcgg gcgcgcgccc gaaggtgtcg cgcg
//
LOCUS       DATAIQ010000711         4359 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_452073, whole genome shotgun sequence.
ACCESSION   DATAIQ010000711 DATAIQ010000000
VERSION     DATAIQ010000711.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4359)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4359)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4359
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_452073"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2801
                     /locus_tag="VHN20_11800"
     CDS             <1..2801
                     /locus_tag="VHN20_11800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017485987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016866 - intramolecular transferase
                     activity [Evidence IEA];
                     GO_process: GO:0000023 - maltose metabolic process
                     [Evidence IEA];
                     GO_process: GO:0005991 - trehalose metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="putative maltokinase"
                     /protein_id="HEX2726494.1"
                     /translation="FYWHRFFSHQPDLNFDNPKVRQAVIQTMRFWLRMGVDGLRLDAI
                     PYLIERDGTNCENLPETHEVIKKIRAALDARYSDRMLLAEANQWPEETAPYFGQGDEC
                     HMAFHFPLMPRIYMALAQEDRHPVTDIMRQTPEIPEGCQWAIFLRNHDELTLEMVTDK
                     ERDYLWSFYAAERRARINLGIRRRLAPLLENDRRKIELLNSLLLSMPGTPVLYYGDEI
                     GMGDNIYLGDRDGVRTPMQWSPDRNGGFSKADPARLFLPAIQDPIYGYDAVNVEAQSR
                     SPSSLLNWMRRMIAIRRTQRALGRGSLRFLYPANRKVLAYLREYENEAMLCVANVSRA
                     PQAVQLDMSEFKGRIPSEMSGGSEFPPIGDLPYLLTLPAYGFYWFQLSEPAKAPQRVE
                     PLTAPELFTLVLTGPLESLLTGRERHAFERTIAPRFVASRRWFGAKEKAINGIHVLDV
                     ATLKNVAGHEAFLLPRVAVDFRGGERQEYFVPLAVEEGREDEALMPFAVARVRRGARV
                     GLMYGAASSPDFGVAMIEGIKGNAEVPCKDGVIRFRATKELEPGTEIDPADVRRLGAE
                     QSNTSIGFGSRMVLKLYRRLQRGIHPELEVGRFLTETAGFEHTPALLGSVEHVAADGT
                     PAALAVLQRFVRNQGDAWTFTLESLRRELDTLVLLPEADGPRVREAFAGYFTYARILG
                     KRTAELHRAFATPTDDPAFAIEPLTGDDVRAVAEDARAWADRAFAAMAHIGAGAPDST
                     RQAIEALASRRQAFEALLDELAVEPAGAVKSRAHGDYHLGQVLIVEDDVSIVDFEGEP
                     SRPVEERRAKSSPLRDVAGMLRSFAYAAETVAREVSHRFPDAAPRAAAITARWRQRAE
                     SAFLTAYEEAAQGSPVWVADEATRSRLLRLHLLAKAVYEIDYEANNRPDWIETPIRGV
                     LSVLDDKVEAKADAKVEA"
     gene            2798..>4359
                     /gene="glgB"
                     /locus_tag="VHN20_11805"
     CDS             2798..>4359
                     /gene="glgB"
                     /locus_tag="VHN20_11805"
                     /EC_number="2.4.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018263127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003844 - 1,4-alpha-glucan branching
                     enzyme activity [Evidence IEA];
                     GO_process: GO:0005978 - glycogen biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-alpha-glucan branching enzyme"
                     /protein_id="HEX2726495.1"
                     /translation="MSADDTTRKPRPARPPRRAAARSTAGGSAQVEATPEAARAGPES
                     PVDRAAIDAIMAADHGDPFAVLGPHQIAPEIWEIRAVLPEAVAAFVEVDGRAIEMQRR
                     HAAGFFVARVEGALRPTYRLRIDTGEREILREDPYRFESFLKHEELQALRDVGGDTIY
                     CRLGAHRKTLEGVAGFGFAVWAPNARRVSVIGDFNDWDGRRNPMRLRHDGGVWEIFIP
                     AIEAGPRYKFEIKGADGGLHLKADPLAFAAEPPPATASVVHGEPHFSWRNDSWLANRG
                     AKDPRKAPISVYECHLGSWGRVPEERNRYLTYRELAERLVPYVKNMGFTHIELLPITE
                     YPFDGSWGYQPVSLFAPTSRFGSPEDFCAFVEAAHEAGIGIILDWVPGHFPNDPHGLG
                     YFDGTHLYEHADPRQGFHQDWGTYIYNYGRQEVAAFLIANARFWLERYRLDGLRVAAV
                     ASMLYLDYSRQPGQWVPNRYGGNENIEAIDFLRRMNEVAYTSSPGVITVAEESTAWPG
                     VSHPTYTGGLGFG"
BASE COUNT          686 a         1547 c         1441 g          685 t
ORIGIN      
        1 agttctactg gcatcgcttc ttcagccacc agccggatct gaacttcgac aatccgaagg
       61 tgcggcaggc ggtcatccag acgatgcgct tctggctgcg catgggcgtg gacggcctgc
      121 ggctcgacgc gatcccgtat ctcatcgagc gcgatggcac gaactgcgag aaccttcccg
      181 agacgcacga ggtcatcaag aagatccgcg ctgccctcga tgcgcgctac tcggaccgca
      241 tgctgctcgc cgaagccaac cagtggccgg aggagaccgc gccctatttc gggcagggcg
      301 acgaatgcca catggcgttc cacttcccgc tgatgccgcg catctacatg gcgctcgccc
      361 aggaggaccg gcatccggtc accgacatca tgcgccagac gccggagatc ccggagggat
      421 gccaatgggc gatcttcctg cgcaaccacg acgagctgac cctcgagatg gtcaccgaca
      481 aggagcgcga ttacctgtgg tccttctatg ccgccgagcg gcgcgcccgc atcaatctcg
      541 gcatccggcg ccgcctggcg ccgctcctcg agaatgaccg ccgcaagatc gagctgctga
      601 actcgctgct cctgtcgatg cccggaacgc cggtgctcta ttacggcgac gagatcggca
      661 tgggcgacaa catctatctc ggcgaccgcg acggcgtgcg cacgccgatg caatggtcgc
      721 ccgaccgcaa cggcggcttc tcgaaggccg acccggcgcg gctgttcctg ccggctattc
      781 aggatccgat ctacggctac gacgccgtca acgtcgaggc gcagtcgcgc agcccgtcga
      841 gcctgctcaa ctggatgcgc cgcatgatcg ccatccggcg cacccagcgc gccctcggcc
      901 gcggcagcct gcgcttcctc taccctgcca accgcaaggt gcttgcctat ctgcgcgaat
      961 acgagaacga ggcgatgctc tgcgtcgcca atgtgtcgcg cgcgccgcag gccgtgcagc
     1021 tcgacatgtc cgagttcaag ggacgcatcc cgtccgagat gagcggcggg agcgagttcc
     1081 cgccgatcgg cgacctgccc tatctgctga ccttgcccgc ctacggcttc tactggttcc
     1141 agctctcgga accggccaag gccccccagc gcgtcgagcc gctgacggcg cccgaactgt
     1201 tcacgctcgt cctgacgggc ccgctcgagt cgctcctgac cgggcgcgag cggcacgcct
     1261 tcgaacggac gatcgcgccg cgcttcgtcg cctcgcggcg ctggttcggc gccaaggaga
     1321 aggcgatcaa cggcatccac gtgctcgacg tcgcgacgct caagaacgtc gccggtcatg
     1381 aggcctttct tctgccccgc gtcgcggtcg acttccgcgg cggcgagcgg caggaatatt
     1441 tcgttccgct ggccgtcgag gaaggtcgcg aagacgaggc cctgatgccg tttgcggtgg
     1501 cacgcgtgcg ccgcggcgcg cgcgtcggcc tgatgtacgg cgccgcgtcg tctccggact
     1561 tcggcgtcgc catgatcgag ggcatcaagg gcaacgccga ggtgccctgc aaggacggcg
     1621 tcatccgctt tcgcgccacc aaggagctgg agcctggaac cgagatcgac cccgccgacg
     1681 tgcggcggct cggagccgag cagagcaaca cctcgatcgg gttcggctcg cgcatggtcc
     1741 tcaagctgta tcgccgcttg cagcgcggga tccatccgga actcgaggtc ggccgtttcc
     1801 tgaccgagac cgccggcttc gagcatacgc cggcgctgct cggcagcgtc gagcacgtcg
     1861 cggccgacgg aactccggcg gcgctggcgg ttctgcagcg cttcgtgcgc aaccagggcg
     1921 acgcctggac cttcacgctc gagtcgctcc ggcgcgagct cgatacgctc gtgcttctcc
     1981 cggaagcgga tgggccgcgc gtcagggagg cctttgccgg ctatttcacc tatgcgcgca
     2041 tcctcggaaa gcgcacggcg gagctgcacc gggcattcgc gacgccgacc gacgaccccg
     2101 cctttgcgat cgagcccctg accggcgacg acgtgcgggc tgtggccgag gatgcccgcg
     2161 cctgggccga ccgcgccttc gcggcgatgg cgcacatcgg cgccggagcg ccggactcga
     2221 cccggcaggc gatcgaggcc ctggcttccc gtcgccaggc gttcgaggcg ctgctcgacg
     2281 aactggccgt cgagccggcg ggagccgtca agtcgcgcgc ccatggcgac tatcatctcg
     2341 gccaggtgct gatcgtcgag gacgacgtga gcatcgtcga tttcgagggc gagccgtccc
     2401 gcccggtcga agaacggcgc gccaagagct cacccttgcg cgacgtggcc gggatgctgc
     2461 gctcgttcgc ctacgcggcc gagacggtgg cccgcgaggt ctcgcatcgc ttccccgacg
     2521 ccgcgccgcg ggccgccgcc atcacggcgc ggtggcgcca gcgggcggag agcgcgttcc
     2581 tcacggccta cgaggaggcg gcgcaaggca gcccggtctg ggttgccgac gaggcgacgc
     2641 ggtcgcgtct cctgcgcctg cacctcctgg ccaaggccgt ttacgagatc gactacgaag
     2701 ccaacaaccg gcccgactgg atcgaaaccc cgattcgggg cgttctgtct gtcctggacg
     2761 acaaggttga ggcaaaggct gacgcaaagg ttgaggcatg agcgccgacg acaccacccg
     2821 caagccccgc ccggcgcggc ctccccggcg cgccgcggcg cgcagcaccg ccggcggtag
     2881 cgcccaggtc gaggcgacgc cggaggcggc ccgcgccggc cccgaatcgc ccgtcgaccg
     2941 ggccgccatc gacgcgatca tggcggccga tcacggcgac cccttcgccg tcctcggtcc
     3001 gcatcagatc gcgcccgaga tctgggaaat ccgcgccgtc ctgccggaag cggtcgccgc
     3061 attcgtcgag gtggacggcc gggcgatcga aatgcagcgc cggcacgcgg ccgggttttt
     3121 cgtggctcgc gtcgaaggcg ccttgcgccc gacgtaccgg ctgcgcatcg acaccggcga
     3181 gcgcgaaatc ttgcgtgagg acccttaccg gttcgagtca ttcctcaagc acgaggaact
     3241 gcaggccctg cgcgacgtcg gcggcgacac gatctattgt aggctcggcg cgcaccgcaa
     3301 gacgctcgag ggcgtggccg gattcggctt cgcggtgtgg gccccgaacg cgcgccgcgt
     3361 cagcgtgatc ggtgatttca acgactggga cgggcgccgc aatccgatgc gcctgcgcca
     3421 cgacggcggc gtatgggaga tcttcatccc cgccatcgag gcggggcccc gctacaagtt
     3481 cgagatcaag ggggccgacg gcgggctgca cctgaaggcc gatccgcttg cctttgcggc
     3541 cgagcccccg ccggcgacgg cgtccgtcgt gcacggcgag ccgcactttt cgtggcgcaa
     3601 cgattcctgg ctcgcgaacc gcggcgccaa ggatccgcgc aaggcgccga tctcggttta
     3661 cgagtgccat ctcggatcgt ggggccgcgt tcccgaggag cgcaaccgtt acctgaccta
     3721 ccgcgagctg gccgagcgtc tcgtccccta cgtcaagaat atgggcttca cccatatcga
     3781 gctgcttccc atcacagagt atccgttcga cggctcgtgg ggctaccagc cggtctcgct
     3841 gttcgcgccg acgagccgct tcggcagccc ggaggatttc tgcgccttcg tcgaggcggc
     3901 gcacgaagcg ggcatcggca tcatcctcga ttgggtgccg ggccatttcc ccaacgatcc
     3961 gcacgggctc ggctatttcg acggcaccca tctctacgag catgccgacc cgcgccaggg
     4021 attccaccag gactggggca cctacatcta caattacggg cgccaggagg tggcggcgtt
     4081 cctgatcgcc aacgcgcgct tctggcttga gcgatatcgc ctcgacggcc tgcgcgtcgc
     4141 cgcagtcgcc tccatgctct atctcgatta ttcgcggcag cccgggcagt gggtgcccaa
     4201 ccgctacggc ggcaacgaga atatcgaggc gatcgacttc ctgcgccgca tgaacgaggt
     4261 ggcctacacc tcgtcacccg gcgtcatcac ggtggccgag gaatcgaccg cctggccggg
     4321 ggtgtcgcac ccgacataca ccggcggcct cggcttcgg
//
LOCUS       DATAIQ010000712         1592 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_201423, whole genome shotgun sequence.
ACCESSION   DATAIQ010000712 DATAIQ010000000
VERSION     DATAIQ010000712.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1592)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1592)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1592
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_201423"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            278..>1592
                     /locus_tag="VHN20_11810"
     CDS             278..>1592
                     /locus_tag="VHN20_11810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010967016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M10 family metallopeptidase"
                     /protein_id="HEX2726496.1"
                     /translation="MCVMCAAQGLSASWQTFDHDIANAGGSSPAEASPEAATAVLVGF
                     TGQQNIDGLLWGTRWSGAITYSFPDARADYEVTYSEADYGFGAVSFSQQQAARYILEG
                     TSAYSGGPKMGLTALESFTEASISDAGFNGADIRIAKSGEANPTAYAYLPDGSYTGGD
                     VWFGSYHDYSNPRVGNYDFVTMIHELGHALGLKHGHAADGGAVMSADRDSMEFSVMTY
                     RPYIGASTTRGYTNETYGFAQTYMMYDIAALQHLYGADFTTNSGATVYSWSAVTGETF
                     VNGVGQGAPGTGAGGSSNRIFQTIWDGGGVDTYDFSNYATNLTIDLTPGGWSLLSAAQ
                     QAYLGDGHYARGNVFNALQFQGDARSLIENAIGGSGADKIVGNIADNRLTGGAGNDVL
                     DGGGGVNTAVYSGSFNDYTWSQKADSSLTISDLRAGQADGIDTLLN"
BASE COUNT          297 a          533 c          500 g          262 t
ORIGIN      
        1 acgctttgtt gcgcctccgt cctgacatcc tcgccttgct gcgtttccgg cgaagcggcg
       61 tccgctccgc cgatcaagcc cagcctgcgg gctccgcctc tcgagctccg ctcgaggcct
      121 gcggccagcc ccgaatggta aacgggaccg ccgccctgcg atgagggaag tttcccgctc
      181 attaagacat accgattacc gtccggaccg caggctcctc gtgaggccgg cgcgacgttc
      241 cgcacgcccg gtcaggtgaa atcagcagga acttccgatg tgcgtgatgt gcgcagccca
      301 ggggctctcc gcatcctggc agaccttcga ccatgacatt gcaaatgccg gcggcagcag
      361 ccccgccgag gcgtcgccgg aggccgcgac ggcggtcttg gtgggcttca caggccagca
      421 gaatatcgac gggctgttgt ggggaacgcg gtggagcggc gcgatcacct acagcttccc
      481 ggacgcgcga gccgactacg aggtcacgta ttcggaagcc gactatggct tcggcgcggt
      541 gtcattcagc cagcagcagg cggcgcgcta tatcctcgaa ggaacaagcg cgtatagcgg
      601 cggcccgaag atgggcctga cggcgctcga aagcttcacc gaggcgagca tctcggacgc
      661 gggcttcaat ggcgcggata tccgcatcgc caagtcgggc gaggccaatc cgacagccta
      721 cgcctatctt cccgacggca gctacactgg cggcgacgtc tggttcggaa gctatcacga
      781 ttactccaat ccgcgcgtcg gcaactacga tttcgtgacg atgattcacg agcttggtca
      841 cgcgctcggg ctcaagcacg gtcacgcggc cgacggcggc gccgttatga gcgccgaccg
      901 ggactcgatg gagttctcgg tcatgaccta ccggccatat atcggcgcgt cgaccacgcg
      961 cggctacacc aacgaaacct acggcttcgc ccaaacgtac atgatgtacg acatcgcggc
     1021 gctgcagcat ctctacgggg ccgatttcac gaccaacagc ggcgcgaccg tctattcgtg
     1081 gagcgcggtg accggcgaga ccttcgtcaa cggcgtcggg caaggcgctc ccgggaccgg
     1141 cgcgggcgga tcatccaacc gcatcttcca gacgatctgg gacggcggcg gcgtcgacac
     1201 ctatgatttc tcgaactacg cgaccaacct gacgatcgac ctcacccccg gcggctggtc
     1261 gctcctgtcg gccgcgcagc aggcgtatct cggagacggc cactacgcgc gcgggaacgt
     1321 gttcaacgcg ctgcagttcc agggtgacgc acgctcgctc atcgagaatg ccatcggcgg
     1381 atccggcgcc gacaagatcg tcgggaacat cgccgacaac cgcctgaccg gcggcgccgg
     1441 caacgatgtc ctggatggcg gcggcggcgt caacaccgcc gtctattccg gaagcttcaa
     1501 tgattacacc tggtcgcaga aagcggattc cagcctcacg atctcggatc tgagggccgg
     1561 tcaggcggac ggaatcgaca cgctgctcaa ca
//
LOCUS       DATAIQ010000713         2924 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_201584, whole genome shotgun sequence.
ACCESSION   DATAIQ010000713 DATAIQ010000000
VERSION     DATAIQ010000713.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2924)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2924)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2924
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_201584"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..462)
                     /locus_tag="VHN20_11815"
     CDS             complement(<1..462)
                     /locus_tag="VHN20_11815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003531960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX2726497.1"
                     /translation="MTALLKVEDLSVAFRQGGKDTLAVDRISFDVKAGETVALVGESG
                     SGKSVSALSILKLLPYPAAHHPSGKILFKGQDLLAAGEAQMRAVRGDDITMVFQEPMT
                     SLNPLHTVEQQVGEILKLHRGLSDRDGRARTLELLELVGIREAESRLGAYPH"
     gene            complement(459..1646)
                     /locus_tag="VHN20_11820"
     CDS             complement(459..1646)
                     /locus_tag="VHN20_11820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012334142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX2726498.1"
                     /translation="MNIAPKTPELDRVPVASPAAVPVAPPLPREGFVRLSPLNRRRLQ
                     SFKANRRGYWSFWIFLVLFVVSLFAELVANDRPIIASYKGEWLAPVLVDYPEEKFGGF
                     LARTDYRDPVIRKEIEDNGWMIWPPIRFSYNTHNLDLPVPAPAAPTWMLEDAQCRPLA
                     ERMGGAGCRDIEWNWLGTDDQGRDVVARLIYGFRLSVLFGLVLAVVSSVVGVLAGAVQ
                     GYFGGWTDLIFQRFIEIWTSLPSLYLLIIVSSIITPSFWVLLGILLLFSWVALVGVVR
                     AEFLRARNFEYVRAARALGLSNATIMFKHLLPNAMVATLTFLPFILNGSITTLTSLDF
                     LGFGLPPGSPSLGELLAQGKANLQAPWLGLTGFFVIAFMLSLLIFVGEAVRDAFDPRK
                     TFA"
     gene            complement(1654..2787)
                     /locus_tag="VHN20_11825"
     CDS             complement(1654..2787)
                     /locus_tag="VHN20_11825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012331523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="microcin C ABC transporter permease YejB"
                     /protein_id="HEX2726499.1"
                     /translation="MWSYILKRLLLMIPTLFGIMLISFVIVQFAPGGPVERILAQLQG
                     TDAGATSRIAGGASGDFGAAPGAQPGGAVDTTSSRYRGAQGLDPQFIKQLETQFGFDR
                     PAHERFLKMLWDYARFDFGKSYFRDVSVLQLIKEKLPVSITLGLWMTLLSYAISIPLG
                     IRKAVKDGTSFDVWTSAAVIIGYAIPGFLFAILLIVLFAGGSFWQIFPLRGLWSDEWS
                     GVPWYQWITSPRALADYFWHIALPITAMALGAFATSTLLTKNSFLDEIRKQYVLTARM
                     KGLSERQVLYGHVFRNAMLIVIAGFPGAFINAFFAGSLLIETIFSLDGLGLLSFESIV
                     NRDYPVVFANLYIFSLLGLVVNLISDLTYTWIDPRIDFETREA"
BASE COUNT          596 a          921 c          985 g          422 t
ORIGIN      
        1 atgcggatag gcgcccagcc ggctttccgc ctcgcggatg ccgacaagct cgagcagctc
       61 gagcgtgcgc gcccgcccat cgcggtcgga caggccgcga tgcagcttga ggatctcccc
      121 gacctgctgc tcgaccgtgt gcagcgggtt gagcgacgtc atcggctcct ggaacaccat
      181 ggtgatgtcg tcgccgcgca cggcgcgcat ctgcgcctcg ccggcggcaa ggaggtcctg
      241 ccccttgaac aggatttttc ccgacgggtg atgcgcggcg ggataaggca gcagcttcag
      301 gatcgagagc gccgacaccg acttgccgga gccggattcg ccgaccagcg ccaccgtctc
      361 gccggccttg acgtcaaacg agatgcggtc gaccgcgagc gtgtccttgc cgccctggcg
      421 aaaggcgacc gaaaggtcct cgaccttgag cagggctgtc atgcgaaggt cttccgcgga
      481 tcgaaggcgt cgcgcaccgc ctcgccgaca aagatcagca gcgacagcat gaaggcgatc
      541 acgaagaacc cggtgaggcc gagccagggc gcctgcaggt tggccttgcc ctgggccaac
      601 agctcgccga gggacggcga gcccggcggc aggccgaagc cgaggaagtc gagcgaggtc
      661 agggtggtga tcgagccgtt gaggatgaac ggcaggaagg tgagcgtcgc caccatcgcg
      721 ttcggcaaga ggtgcttgaa catgatggtc gcgttcgaga gcccgagggc gcgcgcggcg
      781 cgcacgtatt cgaaattgcg ggcgcgcagg aactcggcgc ggacgacgcc gaccagcgca
      841 acccacgaga agagcagcag gatgcccaac aacacccaga agctcggggt gatgatcgac
      901 gagacgatga tcagcagata aagcgagggc agcgaggtcc agatctcgat gaagcgctgg
      961 aagatcagat ccgtccagcc gccgaaatag ccctgcaccg ctccggccag gacgccgacc
     1021 accgacgaga ccacagccag gaccagcccg aacaacaccg acagacggaa gccgtagatc
     1081 aggcgcgcga ccacgtcgcg gccctggtcg tcggtgccga gccagttcca ctcgatgtcc
     1141 cgacatcccg ctccgcccat gcgttccgcg agtgggcggc actgcgcgtc ctcgagcatc
     1201 cacgtcgggg ccgcgggcgc cggcaccggc aggtcgagat tgtgcgtgtt gtacgagaag
     1261 cggatcggcg gccagatcat ccagccattg tcctcgatct ccttgcggat caccgggtcg
     1321 cgatagtcgg tgcgggcgag aaagccgccg aacttctcct cggggtaatc aacgagaacc
     1381 ggggccagcc actcaccctt gtaggaggcg atgatcggcc ggtcattggc gacgagctcg
     1441 gcgaacaagc tgacgacgaa caggacgagg aatatccaga acgaccagta gccgcgccgg
     1501 ttggccttga agctctgcag gcgccgccga ttgagcggcg acagccgaac aaagccctcg
     1561 cgcggcaacg gcggcgccac cggcaccgca gccggcgagg cgaccgggac gcggtccagc
     1621 tccggcgtct tgggggcgat gttcatgacg gcctcaggcc tcccgcgtct cgaaatcgat
     1681 gcgcggatcg atccatgtgt aggtcaggtc cgagatcagg ttcaccacga ggccgagcaa
     1741 cgagaagata tagaggttgg cgaacaccac cggatagtcg cggttgacga tcgactcgaa
     1801 cgagagaagc ccgaggccgt cgagcgagaa aatcgtctcg atcaggagcg agcccgcgaa
     1861 gaaggcgttg atgaaggcgc ccgggaagcc ggcgatcacg atcagcatgg cattgcggaa
     1921 gacgtggccg tagagcacct gtcgctccga caggcctttc atgcgcgccg tcaggacata
     1981 ctgcttgcgg atctcgtcga ggaacgagtt cttggtcagc agcgtcgagg tggcgaaggc
     2041 accgagcgcc atggcggtga tgggcagcgc gatgtgccag aagtagtcgg cgagcgcgcg
     2101 cggactagtg atccactggt accacggcac gccgctccac tcgtcggacc acaggccgcg
     2161 caaggggaaa atctgccaga aggagccgcc ggcgaacagc acaatcagga gaatcgcaaa
     2221 caggaagcct gggatcgcat agccgatgat cacggccgcc gaggtccaca cgtcgaacga
     2281 ggttccgtcc ttgacggcct tgcggatgcc gagggggatc gagatggcgt aggagagcag
     2341 cgtcatccac aagccgagcg tgatcgacac cggcagcttc tccttgatca gctggagaac
     2401 cgacacgtcg cggaaatagc tcttgccgaa atcgaagcgc gcatagtccc acagcatctt
     2461 gaggaagcgc tcgtgggccg gccgatcgaa gccgaactgc gtctcgagtt gcttgatgaa
     2521 ttgcgggtcg agcccttgcg ctccgcgata gcgcgacgag gtcgtgtcga ctgcgccgcc
     2581 cggctgcgca cctggcgcgg cgccgaaatc gcctgacgcg ccgccggcga tgcgcgaggt
     2641 ggccccggcg tcggtgccct ggagctgcgc caggatgcgc tcgaccggcc cgccgggcgc
     2701 gaactgcacg atgacgaagg aaatgagcat gatcccgaac agcgtcggga tcatcagcaa
     2761 caggcgcttg agtatgtagg accacatgga tctatgccgc tccttcgctc gcgctcatcg
     2821 ctttgccgcc caccacgtca tctggaccca cgtctccggc cgatagtaat ccggcgcgac
     2881 cttcggcatc tcgaatttgc cggccctgta cgagatacgc gagg
//
LOCUS       DATAIQ010000714         1913 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_155850, whole genome shotgun sequence.
ACCESSION   DATAIQ010000714 DATAIQ010000000
VERSION     DATAIQ010000714.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1913)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1913)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1913
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_155850"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..237)
                     /locus_tag="VHN20_11830"
     CDS             complement(<1..237)
                     /locus_tag="VHN20_11830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4166 domain-containing protein"
                     /protein_id="HEX2726500.1"
                     /translation="MGQRAHTAQASLHPAPHHDASLCDLRFRVLLGAKEWDALDEAIR
                     QRFSKRLAGGATAIYVGRSIETWMSRAGWLLAQAA"
     gene            complement(264..821)
                     /locus_tag="VHN20_11835"
     CDS             complement(264..821)
                     /locus_tag="VHN20_11835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010685672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEX2726501.1"
                     /translation="MTEITDATQELPAAIERFVLNWGDMGGSWGVNRSVSQIHALLYL
                     SDRPLTAEDIADMLGMARSNVSNSLKELISWGLVRRVPVKADRRDHFEAETEIWEIFA
                     RIAAGRKEREIDPAIAALRSCVAEAEADRAVHPVARARLKTMLEFTETVDRWYAQMAK
                     VPRPKLLALLRLGSRIVNLLPGTRK"
     gene            complement(1155..>1913)
                     /locus_tag="VHN20_11840"
     CDS             complement(1155..>1913)
                     /locus_tag="VHN20_11840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012652133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytosine deaminase"
                     /protein_id="HEX2726502.1"
                     /translation="GVEVVGGIPHFERTMGDGAASVRALCELAAGRGLRVDMHCDETD
                     DPLSRHIETLAAETQRLGLQGRVAGSHLTSMHSMDNYYVSKLLPLMAEAGVAAIANPL
                     INIVIQGRHDAYPKRRGMTRIPEMRGHGILCAFGHDCVMDPWYSLGQADMLEAAHMGI
                     HVGHMTSREAMRFAFDAVTVNPARIMGLEGYGLEVGCHADFVLLQARDPIEAIRLRAA
                     RLAVVRRGRVIAEAAPRVTRLSLPERPGEVDAST"
BASE COUNT          302 a          650 c          672 g          289 t
ORIGIN      
        1 cgcggcctgc gcgagcagcc atcccgcacg actcatccag gtctcgatcg agcggccgac
       61 gtaaatggcg gtcgccccgc cggcgagccg ctttgagaaa cgctggcgga tcgcctcgtc
      121 gagcgcatcc cattccttcg cgccgagcag aacgcgaaag cgcaggtcgc acagcgacgc
      181 gtcatgatga ggagcggggt gcagacttgc ttgtgccgtg tgcgcgcgct gccccatgca
      241 ccactcctcg gatgagccct gctctatttc ctcgtcccgg gaagcaggtt gacgatgcgg
      301 ctgccgagcc tcagcagcgc cagcagcttt gggcgcggca ccttggccat ctgcgcgtac
      361 cagcggtcga cggtctcggt gaactcgagc atcgtcttca gccgggcgcg cgccaccgga
      421 tgcacggcgc ggtcggcctc ggcctcggcg acacaggacc tgagcgcggc gatggccggg
      481 tcgatctcgc gttccttgcg gccggcggcg atcctcgcga agatttccca gatttcggtc
      541 tccgcctcga agtgatcgcg ccggtcggcc ttcacgggaa cgcggcggac cagtccccac
      601 gagatcagct ccttgaggga gttggagacg ttcgagcggg ccatgccgag catgtcggcg
      661 atgtcctcgg cggttagcgg ccggtccgag aggtagagga gcgcgtggat ctggctgacc
      721 gagcggttga cgccccacga gccgcccatg tcgccccagt tcaggacgaa gcgctcaatg
      781 gcggcgggaa gctcttgcgt tgcgtccgta atttctgtca tgacagaaat atctgactaa
      841 agcgccttcg gagtcaagat gtccccgtcc cgcgtcatgg ccgggcctgt cccggccatc
      901 cacgccttgc tgcgccaagc tccggtccgt tcgcattgtg gcgcgtgctc attatcgagc
      961 ccgcctgtca gagacgtggc acaggcgtgg atggccggac ccggatcggc gctccgcgcc
     1021 gtccgggcac caaagggaca ccaagcccgg ccaagacgat gcgagggggg cgacatcgcc
     1081 gccggggagc gggcgcagcg cgaaagcgcc atgcgctcac cgggcgaggc tcaaccctcg
     1141 gacgacaacg gcgcctaggt cgaggcgtcg acctcgccgg ggcgctcagg cagcgacagc
     1201 cgggtgacgc gcggcgccgc ctcggcgatg acgcggccgc ggcgcacgac ggcgaggcgc
     1261 gcggcgcgca ggcggatcgc ctcgatcgga tcgcgggcct gcaggagcac gaagtcggcg
     1321 tggcagccga cctcgagccc gtagccctcg aggcccatga tcctggccgg gttcaccgtg
     1381 accgcgtcga aggcgaagcg catggcctcg cggctggtca tgtggccgac atggatcccc
     1441 atgtgggcgg cctcgagcat gtcggcctgg ccgagcgaat accaggggtc catcacgcag
     1501 tcatggccga acgcgcacag gatgccgtgg ccgcgcatct cgggaatgcg cgtcatgccg
     1561 cggcgcttcg ggtaggcgtc gtggcggccc tggatgacga tgttgatcag cgggttggcg
     1621 atcgccgcga cgccggcctc cgccatcagc ggcagcagct tcgagacgta ataattgtcc
     1681 atcgaatgca tcgacgtgag atgcgagccg gcgacgcggc cctgcagccc gagccgctgc
     1741 gtctcggcgg cgagcgtctc gatatggcgc gacagcggat cgtcggtctc gtcgcaatgc
     1801 atgtcgacgc ggaggccgcg cccggcggcg agctcgcaca aggcgcgcac cgacgcggcg
     1861 ccgtcgccca tcgtgcgctc gaaatgcggg atgccgccga ccacctcgac gcc
//
LOCUS       DATAIQ010000715         2310 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_130256, whole genome shotgun sequence.
ACCESSION   DATAIQ010000715 DATAIQ010000000
VERSION     DATAIQ010000715.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2310)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2310)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2310
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_130256"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(67..414)
                     /locus_tag="VHN20_11845"
     CDS             complement(67..414)
                     /locus_tag="VHN20_11845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726503.1"
                     /translation="MRFTVIALAAVLSTAASAQGINETYYGCIGQSEADCESRIARIA
                     GVKLRTTHYRNCAWQASRRSGSVEDDLGQQICRQHSGTLRAAVRMRTDKGGRCGYAID
                     RIVCSFSATAPRP"
     gene            complement(941..>2310)
                     /locus_tag="VHN20_11850"
     CDS             complement(941..>2310)
                     /locus_tag="VHN20_11850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012752859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DNA polymerase"
                     /protein_id="HEX2726504.1"
                     /translation="GKGKAAVTFDKVTLERATCYAAEDADVTLRLWRLLKPRLVSERR
                     TTVYETLERSLIDVLARMEMRGIAVDRQILSRLSGHFAQTLARLEDEIHELAGEKFSP
                     GSPKQIGDILFGKMGLPGARKTATGQWATGANVLDELAVAGHELPRKLLEWRQLAKLK
                     STYTDALQGYMHPQTGRVHTSYSLAATTTGRLSSSEPNLQNIPIRTEEGRKIRAAFVA
                     GPGQKIISADYSQIELRVLAHVADIPQLRQAFADGVDIHAATASAMFGVPLGDVTADL
                     RRNAKTINFGIIYGISAFGLAERLGIERGEAGAFIKQYFERFPGIRDYIEETKRSCRE
                     NGFVTTLFGRVCHYPDIKVSNPSQRAAVERQAINAPIQGTAADIIRRAMVRMEAVLAD
                     AGLSARMLLQVHDELVFEVPDEEVEASLPVIRKVMEEAPHPAVKLRVPLAVDARAAGN
                     WDEAH"
BASE COUNT          394 a          760 c          765 g          391 t
ORIGIN      
        1 gagagcagcc aggcgatcga gatcgtcgag ctgctctgag ccgacgcccc gagcgtcgcc
       61 tgggcattac gggcgcgggg cggtcgcgga gaagctgcag acgatccgat cgatcgcgta
      121 gccgcagcgc ccgcccttgt cggtgcgcat cctgacggcg gcgcgcaaag tcccgctgtg
      181 ctggcggcag atctgctgcc cgagatcgtc ctcgacgctc cctgatcgac gcgaggcctg
      241 ccaggcacaa ttgcggtagt gggtcgtccg tagcttcaca ccagctattc gggcgatcct
      301 gctttcgcaa tcggcctccg actgcccgat gcagccataa taggtctcgt tgatgccctg
      361 cgcagacgcc gccgtcgaca gcactgccgc gagcgcgatt accgtaaatc tcattattcc
      421 ccctgcccgg cagcggccga cctgttgcac ctgccggcca cccgattgcc gggccggcgg
      481 ccggcaatgc cgttcatctt tttggcgaat gttgggaaga tttcgcaccc gccacctctt
      541 cacgggcctg tgttgccctc gttcaactca cctcgtcgag ggcgagccct ttcatgacaa
      601 gagcggccac gagcgccaac tgcgtaagga aacgatgacc aggtttgccc gatcctcgcc
      661 gcgcgcaacc tgccagatgc aaatcacaaa tgccgcaagg gcgccgcagg ttcagcgtgg
      721 cgttgataat ggcgtttgat ctcgatctgt ttgaccagaa gtccgcaaac ggtccttccc
      781 agccgacggt aacgcatcac cagccgtcga gctcggccac cgaccggcac acgggcgcaa
      841 gcacggcggc agccagatca tagacgaaca aaagggtgag caggaccagc ggaagcgcga
      901 agagcgcctg tcagggcgcg cgccaaccgc gaccctgcac tcaatgggcc tcgtcccagt
      961 tgccggcggc gcgggcgtcg acggcgagag gcacgcgcag cttcacggcc gggtgcggcg
     1021 cctcttccat caccttgcgg atgaccggaa ggctcgcttc gacctcctcg tccggcactt
     1081 cgaagaccaa ctcgtcgtgc acctgcagca gcatgcgcgc cgacaggccg gcatcggcga
     1141 gcacggcttc catgcgcacc atggcccgcc ggatgatgtc ggccgccgtg ccctggatcg
     1201 gagcattgat cgcctggcgt tcgacggcgg cgcgctgcga gggattcgac accttgatgt
     1261 ccgggtagtg acagacccgg ccgaacagcg tcgtcacgaa gccgttctcg cggcacgacc
     1321 gcttggtctc ctcgatgtaa tcgcggatac ccgggaagcg ttcaaaatac tgcttgatga
     1381 aggcgccagc ctcgccgcgc tcaatgccga gccgctcggc aagcccgaag gcggagatgc
     1441 cgtaaatgat gccgaaattg atcgtcttgg cgttgcgccg cagatccgcg gtcacgtcgc
     1501 ccagcggaac gccgaacatg gctgaggcgg tcgccgcatg gatgtcgacc ccatcggcga
     1561 aggcctgccg cagctgcggg atgtcggcga catgcgcgag cacgcgcagc tcgatctggc
     1621 tgtaatcggc cgagatgatc ttctggcccg gcccggcgac gaaggcggcg cggatcttgc
     1681 gcccttcctc ggtgcggatc gggatattct gcaggttcgg ctcggatgac gacagccggc
     1741 ccgtggtcgt ggcggcgagc gaataggacg tatgcacacg gccggtctgc ggatgcatgt
     1801 agccctgcag cgcatcggta taggtggatt tgagcttggc gagctgccgc cattcgagca
     1861 gcttcctggg cagctcgtgg ccagcgacgg cgagctcgtc gaggacgttg gcgccagtcg
     1921 cccactggcc ggtcgcggtc ttgcgcgcgc ccggcagccc catcttgccg aacaggatgt
     1981 cgccgatctg cttgggcgat cccggcgaga atttctcgcc ggcgagctcg tggatctcgt
     2041 cctcgaggcg ggccagcgtc tgcgcgaaat gacccgagag ccggctcagg atctggcggt
     2101 cgacggcgat gccgcgcatc tccatgcgcg cgagcacgtc gatcagcgaa cgctcgagcg
     2161 tctcgtagac ggtggtgcgg cgctcggaga cgaggcgcgg cttgagcaag cgccacaggc
     2221 gcagggtcac gtcggcatcc tcggcggcgt agcaggtggc gcgttcgaga gtgaccttgt
     2281 cgaaggtgac ggcggccttg cccttgccag
//
LOCUS       DATAIQ010000716         3779 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_452603, whole genome shotgun sequence.
ACCESSION   DATAIQ010000716 DATAIQ010000000
VERSION     DATAIQ010000716.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3779)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3779)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3779
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_452603"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..942
                     /locus_tag="VHN20_11855"
     CDS             <1..942
                     /locus_tag="VHN20_11855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016811 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in linear amides
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetamidase/formamidase family protein"
                     /protein_id="HEX2726505.1"
                     /translation="EAEPGDVLRIRFNKIVPRAYATNFNVPGMFGQFPKEFPDGQIKF
                     FYLDLDKKQMEFAPGIVIPLKPFPGTTGVARAEPGRYSSVPPGRYAGNLDIREMGEGS
                     TLHVPVFVKGALLWSGDSHAGQGNGEINLTAIETAYKELNITVDVIKGQKLEWPRVET
                     PTDWITIGLDQDLNKALDMMKAETVKFLVEERKVAKDAAEQTMLEQWNCPISQVVNVV
                     KGTYCMIPKQANAPRPAALPRDDTSEVFATSAKDPDLNKAMDGASMAMINAIQQKKGL
                     SRLDSYALLSMTMDCRIAPHKEGDKEVHCMVPKSLWQ"
     gene            993..1931
                     /locus_tag="VHN20_11860"
     CDS             993..1931
                     /locus_tag="VHN20_11860"
                     /inference="COORDINATES: protein motif:HMM:NF013465.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter substrate-binding protein"
                     /protein_id="HEX2726506.1"
                     /translation="MPRGRRFPRSASAFLTGLWFVASTFASEGAEPLVVATTPDLKSI
                     TEAIAGGSARVESLVPPGADAEAFEPRPSHLALVRDAALVVRVGLGFDEWLDRLLRQA
                     GNASLQRGGAGYLDASNDIALVEVQGRSVEARSGHAHGAANPHYWLDPVNAEIMSAHI
                     AEALTRVVPDKRDAIVAAQARFAADLKAAVQRWSGALEPYRGAAVVAYHNSWPYFARR
                     FRLNIVDVIETKEGVPPNAARLAALAARMREHKVRVILHEPFEPVEASRFLAERSGAR
                     VVLLAPSVGSKPEAKDFFALFDHNIDLLTKALAESR"
     gene            1937..3280
                     /locus_tag="VHN20_11865"
     CDS             1937..3280
                     /locus_tag="VHN20_11865"
                     /inference="COORDINATES: protein motif:HMM:NF013143.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HEX2726507.1"
                     /translation="MQDLAALLAYPFVAAIIFVGMHTWLGLQVLRRNVVFADLALAQL
                     SALGGTAAVAAGHAPGTLAGFGYALLLTILGAGLLTLTRRMSRHVSQEALIGIVYVVA
                     TALTVLVIDRSPQGAEHVKRMLVGSILTIGPDDVFKLVALYGSISLLHWRLRRPLLAA
                     AHDARDESGSGTVLWDFVFYCTFGVVVTSSVALAGVLLVFSFLIIPAVIGFLFSQRMG
                     AALAVGWGAGILASLGGFGASVALDLPTGATMVTAFAGVLLAAAALRVTMFGDSAARR
                     RNRRRAAVVTAAASALAVFAQGAWLTLSPAGDQPLLAVVEAVTGIGPQPFMTASERRT
                     YDDASAMEGRNRAEVERLRALEREARWSGEGLSEDELRRVASFQQTFNEMGRGERFVQ
                     DHLRARARERQRWAVGLPAMLLAGLALLWLWRSRRLTGIPRKVKGVQTATADAGA"
     gene            3373..>3779
                     /locus_tag="VHN20_11870"
     CDS             3373..>3779
                     /locus_tag="VHN20_11870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012255631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HEX2726508.1"
                     /translation="MVDIATRVYNHTWKIDPIVRSVLDTDFYKLLMGQMIWKRHRGVQ
                     VTFGIQNRTTRVRVADMVDIGELREHLDHVRTLSLTRGESTWLRGNTFYGKRQMFSPD
                     YISWLEGFRFPEYHLEKRDGQYVLTFHGPWVETT"
BASE COUNT          604 a         1283 c         1276 g          616 t
ORIGIN      
        1 gaggcggagc ccggcgacgt gctgcgcatc cgcttcaaca agatcgtgcc gcgcgcctac
       61 gccaccaact tcaacgtgcc cggaatgttc ggccagtttc cgaaggaatt cccggacggg
      121 cagatcaagt tcttctatct cgatctcgac aagaagcaga tggagttcgc gccgggaatc
      181 gtgatcccgc tgaagccgtt ccccggcacg acgggagtgg cccgcgccga gcccggccgc
      241 tacagttcgg tgccgccggg ccgttacgcc ggcaacctcg acatccggga gatgggcgaa
      301 ggctccacgc tccacgtgcc cgtcttcgtc aagggcgcgc tgctgtggtc cggcgattcg
      361 catgccggcc agggcaacgg cgagatcaat ctcacggcca tcgagacggc ctacaaagag
      421 ctgaacataa cggtcgacgt gatcaagggg cagaagctcg aatggccgcg cgtcgagacg
      481 ccgaccgact ggatcacgat cggcctcgat caggacctca acaaggcgct cgacatgatg
      541 aaggccgaga ccgtcaagtt cctcgtcgag gaacgcaagg tcgccaagga cgccgccgag
      601 cagaccatgc tcgagcagtg gaactgcccg atctcgcagg tcgtcaacgt ggtcaagggc
      661 acctattgca tgatcccgaa acaggcgaat gcgccgcgcc cagcggcgct gccgagggac
      721 gacacgagcg aagtgttcgc gacctccgcc aaggaccccg acctgaacaa ggccatggac
      781 ggagcttcca tggcgatgat caacgccatc cagcagaaga aaggcttgtc gcggctcgac
      841 tcttatgcgc tgctcagcat gacgatggac tgccgcatcg cgccccataa agagggcgac
      901 aaggaagtgc actgcatggt cccgaagagc ctgtggcaat aaggaccgtg tcagcccgaa
      961 actcccttcc gacgacgtgg aggggacggg cggtgccgag agggaggcgc tttccacgca
     1021 gcgcctccgc ttttctcacc ggtttgtggt tcgtcgcgtc gacctttgcg tcggagggcg
     1081 ccgagccgct ggtggttgcg acgacgcccg acctgaagag cattacggag gcaattgcgg
     1141 gcggcagcgc gcgcgtcgag agcctcgtcc cgcccggcgc cgatgcggaa gcgttcgagc
     1201 cgcgccccag ccatctcgcg ctcgttcgcg acgccgcgct cgtggtgcgc gtcgggctcg
     1261 gcttcgacga gtggctcgac cggcttcttc gccaggccgg caatgcgagc ctgcagcggg
     1321 gcggggccgg ctatctcgac gcgtcaaacg acatcgccct ggtcgaggtg cagggacgca
     1381 gcgtcgaagc gcggtcgggc catgcccacg gcgccgccaa tccgcattac tggctcgacc
     1441 cggtcaacgc ggagatcatg agcgcccata tcgccgaggc tctcacgcgc gttgttcccg
     1501 acaagcgcga cgccatcgtg gcggcacagg cgcgcttcgc cgcggatctc aaggctgccg
     1561 tgcagcgctg gagcggcgcc cttgagccat atcgcggcgc cgccgtcgtc gcctatcaca
     1621 acagctggcc gtatttcgca cgccgcttcc gcctcaacat cgtcgatgtc atcgaaacga
     1681 aggagggcgt gccgccgaac gccgcgcggc ttgcggccct ggcggcgcgc atgcgcgaac
     1741 acaaggtgcg cgtcatcctg cacgagccgt tcgagccggt cgaagcgtca cgctttctcg
     1801 cagagcgcag cggggcgcgc gtcgtgctgc tcgcgccgtc ggtcggcagc aagccggaag
     1861 cgaaggattt ttttgcgctc ttcgaccaca atatcgacct tctgacgaag gctctcgccg
     1921 agagccggta gtgaccatgc aggatctcgc cgcgctgctt gcgtatccct tcgtcgccgc
     1981 gatcatcttc gtcggcatgc acacctggct cgggctccag gtcctgcgcc gcaacgtcgt
     2041 gttcgcggac ctggcgctgg cgcagctctc ggcgctcggc ggcacggcgg ccgtcgccgc
     2101 cgggcatgcg ccggggacgc tggccggctt cggctatgcc ctgctgctca ccatcctggg
     2161 agcgggcctc ctcaccctca cgcgccgcat gtcgcggcac gtcagccagg aggcgctgat
     2221 cggcatcgtc tacgtggtcg cgaccgcgct cacggttctc gtcatcgacc gctcgcccca
     2281 gggcgccgag catgtcaagc gcatgctcgt cggcagcatc ctgacgatcg gccccgacga
     2341 cgtcttcaag cttgtggcgc tctacgggag catcagcctg ctgcattggc ggttgcggcg
     2401 gccgctcctc gccgccgcgc acgacgcccg cgacgagagc ggctcgggca cggtgttgtg
     2461 ggacttcgtg ttctactgca cgttcggtgt cgtcgtgacg agctcggtgg cgctcgccgg
     2521 cgtgctgctc gtgttctcgt tcctgatcat cccggcggtg atcggcttcc tcttctcgca
     2581 gcgcatgggg gcggcgctgg cggtgggctg gggcgccggc atccttgcca gcctgggcgg
     2641 tttcggcgcg tcagtcgccc tggacctgcc gacgggcgcc acgatggtga cggctttcgc
     2701 gggagtcctg ctggcggcgg cggcgttgcg cgtcacgatg ttcggggact cggccgcgcg
     2761 gcggcgcaac cgtcgcaggg cggccgtcgt gacggcggcc gcgagcgcgc tcgcggtttt
     2821 cgcgcagggc gcgtggctga ccctgtcgcc cgccggcgac cagccgctcc tggccgtcgt
     2881 cgaggccgtc accggcatcg ggccgcaacc gttcatgacg gcctccgaac gccggaccta
     2941 cgacgatgcc agcgcgatgg aagggcgcaa ccgcgccgag gtcgagcggc tgcgcgccct
     3001 ggagcgcgaa gcgcgctgga gcggggaggg cctcagcgag gacgagctgc ggcgcgtcgc
     3061 gtccttccaa cagaccttca acgagatggg gcgcggcgag cgcttcgtgc aggaccacct
     3121 gcgcgcccgg gcgagggagc gtcagcggtg ggcggtgggg ctgccggcga tgctcctggc
     3181 cggcctcgcg ttgctctggc tgtggcgctc gcggcggctg accggtatcc caaggaaggt
     3241 taagggcgtt caaacggcca cggcggacgc gggggcatga tcaggcggct ccggcccccc
     3301 tcgggcgaga cggaatgcgc ccgcggcagg tccggggtaa acattttagc attcacgcgc
     3361 tagataacgg ccatggtcga catcgccacc cgcgtctaca atcacacctg gaagatcgat
     3421 cccatcgtgc gatcggtgct cgacaccgat ttctacaagc tcctgatggg ccagatgatc
     3481 tggaagcgcc accgcggcgt ccaggtcacg ttcggcatcc agaaccgcac cacccgcgtg
     3541 cgcgtcgccg acatggtcga tatcggcgag ttgcgcgagc acctcgacca cgttcgcacc
     3601 ctgtcgctga cgcgcggcga gtcgacctgg ctgcgcggca acacctttta cggcaagcgc
     3661 cagatgttct cgccggatta tatttcctgg ctcgagggct tccgcttccc cgaataccac
     3721 ctcgagaaac gggacgggca atacgtcctc accttccacg gcccgtgggt cgagacgac
//
LOCUS       DATAIQ010000717         4308 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_407022, whole genome shotgun sequence.
ACCESSION   DATAIQ010000717 DATAIQ010000000
VERSION     DATAIQ010000717.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4308)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4308)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4308
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_407022"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(68..496)
                     /locus_tag="VHN20_11875"
     CDS             complement(68..496)
                     /locus_tag="VHN20_11875"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX2726509.1"
                     /translation="MTAFPITSYDGWRVKLPFDYRAPVLVVDDQKQMVELIERYVRKI
                     GFDNVEHTNDGAEALNMVRNKRYWVVISDLNMEPVGGLQLLRAVRSDDSLRKTRFIMA
                     TGDLNTANVAAAKWLGVDTYLLKPFSRHQLESKLAELIGR"
     gene            complement(882..2216)
                     /locus_tag="VHN20_11880"
     CDS             complement(882..2216)
                     /locus_tag="VHN20_11880"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX2726510.1"
                     /translation="MKRGDSYVPPAALAGSMRDFRVPQGDDLLARVGSFFRWQDLRRQ
                     HGLWPFCRSTEEGPTAVCAARDDAGNSMRGVNFASQDYLSLSSHPVIKATAQDVIERY
                     GVHSAGSPALVGNTTHSIALERKIAEFLQMDQVTLYPTGWAAGFGVIKGLVRSADHIV
                     IDALAHTCLQEGASAATRNIYSFRHNDLEHCRHWLSKIRAKDTQNGIMVVTEGLFSMD
                     SDTPDLAALQDLCREFKATLMVDVAHDLGSLGTGGRGHIGLQNMVGKVDIVMGSFSKT
                     FASNGGFVATKSRAVKEYLGFYSPSCTFSNALSPAQAAVILKAFEIVDSAEGEELRNA
                     LLRNVLSLRQQLQDAGMDVYGDPSAIVCVKVGAEGLARLVSRRLPQAGVIANLVEYPA
                     VAKGAARFRLQVMAKHTEQNIADAVTRLRGAVDEATAELSAMSQPQQLKAIA"
     gene            complement(2564..2968)
                     /locus_tag="VHN20_11885"
     CDS             complement(2564..2968)
                     /locus_tag="VHN20_11885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011085073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX2726511.1"
                     /translation="MPKILLVEDNEMNRDMLTRRLQRNGFAVCCAPDGPTGVAMAAEE
                     QPDLILMDVALGEMDGWEATQLIKGRPSTAEIPIIALTAHALASDREKSVEVGCSDFD
                     TKPIDLPRLLDKIRTCLSAGSRQSPQAAAAAR"
     gene            complement(3001..>4308)
                     /locus_tag="VHN20_11890"
     CDS             complement(3001..>4308)
                     /locus_tag="VHN20_11890"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HEX2726512.1"
                     /translation="DVAVLAASITAFWAFPFILRAVGRYNLLVLLSVQNLIFCILWSC
                     YFYGGVSSPTLPWVLTIPLLAFFYLGSSSSLRLAVLALFAANLAGFSALYLLGHSPEK
                     DMSAPSLQGFGIVSTIAASLYVTMMAFYYAKILASGAELENEMKRHLATATELRRAAA
                     DSERAGAAKAEFLAKMSHELRTPLNAVIGYSQMLLEDAAAEGDKQSAADLEKIHAAGH
                     HLLRLVNEVLDLSKIEAGKMELFAEDVDIGALLCDVVESFRAAAQANGNELSLIMDGQ
                     LGRIRCDAKKVQQTISQVVDNAIKFTENGRVTVTIARISGAQGEQISVAVRDSGIGIA
                     QGAIPNLFEKFSGGDDTTSSKYGGTGLGLALSLKLCRLMGGDITVESQLGAGSCFTII
                     LPTVPASPAPVAEAAEEGVQALVALVQRNLAEAAPTTPLTDAA"
BASE COUNT          771 a         1343 c         1418 g          776 t
ORIGIN      
        1 taagccggcc gcgccgctgc cgcgcggcgc tgcaaggtgc ccaccgggac gcagccttgg
       61 cgcgacctca acgtccgatg agctcggcca atttggactc gagctggtgc cgtgagaagg
      121 gcttcagaag gtaggtgtcg acgccgagcc acttggcggc ggcgacgttg gcggtattca
      181 gatctccagt cgccatgatg aagcgcgtct tgcgcaggct gtcgtcggag cgcacggccc
      241 ggagcagctg cagtcctccg accggctcca tgttgaggtc tgagatgacc acccagtagc
      301 gtttgttgcg caccatgttc agcgcttcgg ccccgtcatt ggtgtgctcg acgttgtcga
      361 agccgatctt gcggacatag cgctcgatca gctcgaccat ctgtttctga tcgtcgacga
      421 ccaggaccgg cgcgcgataa tcgaacggca gcttcacgcg ccatccgtcg taggaggtga
      481 tcgggaaagc agtcacagca cgtaccccgg ctagagcatg atccggcgaa gctggaagcc
      541 cgcttcgccg aaaaagatca tgcggcccaa gaagaaattg agcgggttaa ttcaatcgga
      601 attcatcccg ctctagcgct gcgcagcgcg ccgcgagttc atgaacgcga gcgccaacgc
      661 gatcacaagg cagcgaacga ggatcgattt gaggagcgcg gaaattcgca tcgactgtcc
      721 caactcaaat aacgatagct cacaaaattt aatcggctct ttacgggatc gtcccgcgct
      781 agtgaggagg gccccggtgc ggccgcaacg gcgcatcgga gccctgtagt ccttctgccc
      841 gaaaggcagg cgtcagctat gcgcccgcga cgggcggcac ctcaggcgat agccttcaac
      901 tgctgcggct ggctcatcgc gctgagctcc gcggttgcct catcgacggc gccgcgcaga
      961 cgcgtcacgg catccgcgat gttctgctcg gtgtgcttgg ccatcacctg cagcctgaac
     1021 cgcgcggcgc ccttcgccac ggccggatat tcgaccaggt tggcgatgac gccggcctgg
     1081 ggcaggcggc ggctgaccag gcgcgccaga ccttccgcgc ccactttgac gcagacgatg
     1141 gctgacgggt cgccgtagac atccatgccg gcgtcctgca gctgctgcct gaggctgagc
     1201 acgttgcgca gcagtgcgtt gcgcagctct tcgccttcgg ccgagtcgac gatctcgaac
     1261 gctttcagga tgaccgccgc ttgggccggc gagagcgcgt tcgagaacgt gcaggagggg
     1321 ctgtagaagc cgagatattc cttaacggcc cggctcttgg tcgcgacgaa gccgccattc
     1381 gaagcgaagg tcttcgagaa gctgcccatc acgatgtcga ccttgccgac catgttctgc
     1441 aggccgatat gcccgcggcc gccggtcccc agggagccga ggtcatgggc gacgtcgacc
     1501 atcagggtcg ccttgaactc gcggcagaga tcctgcagcg cggcgaggtc gggcgtgtcc
     1561 gagtccatcg agaacaggcc ctcggtgacg accatgatgc cgttctgcgt gtccttcgcc
     1621 cggatcttgc tcagccagtg gcggcaatgc tccaggtcgt tgtgccggaa gctgtagata
     1681 ttgcgcgtag ccgcggacgc accttcctgc aggcaggtat gcgcgagggc gtcgatgacg
     1741 atgtgatcgg cgctgcgaac caggcctttg atcacgccga agccggccgc ccagcccgtc
     1801 gggtacaacg tcacctggtc catctgaagg aactcggcga tcttgcgctc gagggcgatc
     1861 gagtgagtgg tattgccgac cagggcgggc gagccggcgc tatgcactcc gtagcgctcg
     1921 atgacgtcct gcgcggtcgc cttgatgacc gggtgagacg acaggctcag ataatcctgg
     1981 gaagcgaaat tgacgccccg catgctgttg ccggcgtcgt cgcgcgcggc gcagacggcc
     2041 gtcgggccct cctccgtgga cctgcaaaac ggccacaagc catgctgccg gcgcaaatcc
     2101 tgccagcgga agaagctgcc gacgcgcgca agaagatcgt ccccctgcgg aaccctgaaa
     2161 tcccgcatgc tgccggcaag cgccgccggc gggacatagc tgtccccacg tttcataatc
     2221 gtctctcctg ctcgccagtt tctagttcaa gatgcgttat ggcgatgagg aagagatagc
     2281 accggcaagt aaatcactct ttgctttcgg cgccaggtcg gtttgttggc ctctgaaatc
     2341 caggttgcgg ttaccaatct gttttcggtt agtgttttat tttacttacc gaatcctctt
     2401 tgctggcttt ggcgggccgg acacttgatg cgataaagga ggggagaccg ccgacgcaaa
     2461 tgcgcgggga gcagtgcccg cacatcctcc gcctaagcgg gaaaagggct ctggaaatgc
     2521 agggacgact tcccgcgagc ggaacagctc gcggcggaag gggtcaacgc gcggcggcag
     2581 ccgcctgtgg gctctgccga ctgccggccg acaggcacgt ccggatcttg tcgaggaggc
     2641 gcggcaggtc gatcggtttg gtatcgaagt cgctgcaccc gacctcaacg cttttctcgc
     2701 ggtcgctggc aagggcgtgc gcggtaaggg cgatgatcgg gatctcggcc gtgctcggtc
     2761 ggcccttgat cagctgcgtc gcttcccagc cgtccatttc gccgagcgcc acgtccatca
     2821 ggatcagatc gggctgctcc tcggcggcca tggcgacgcc ggtcggcccg tcgggcgcgc
     2881 agcacacggc gaagccgttg cgctgcagcc ggcgggtcag catgtcgcgg ttcatttcat
     2941 tatcttcaac gagcaggatt ttcggcatgg ctggcgcctc ttggtaattg ctgatgatcg
     3001 tcacgcggcg tcggtcaggg gcgtggtcgg agcggcctcg gccagattcc gctgcacgag
     3061 cgcgaccagc gcctgcacgc cctcttcggc agcctcggcg accggcgccg ggctcgccgg
     3121 caccgtgggc aggatgatgg tgaagcaact gccggcgccg agctggctct cgacggtgat
     3181 gtcgccgccc atcaggcggc aaagcttgag gctcaaggcc aggccgagcc cggtgccgcc
     3241 atacttgctc gacgtggtgt cgtcgccgcc gctgaatttc tcgaacaggt tcgggatggc
     3301 gccttgcgca atgccgatgc cgctgtcgcg caccgcgacg gagatctgct cgccctgggc
     3361 gccggatatg cgcgcgatgg tcacggtcac gcgaccgttc tcggtgaact tgatcgcgtt
     3421 gtcgacgacc tgcgagatcg tctgctgcac ctttttcgcg tcgcagcgaa ttctgcccag
     3481 ctgaccgtcc atgatcaggg acagctcgtt gccgttggcc tgcgcggcgg cccggaagct
     3541 ctccacgacg tcgcagagca aggcgccgat gtcgacgtct tccgcgaaca gctccatctt
     3601 gccggcttcg atcttcgaca ggtccagcac ctcgttgacg agcctgagca ggtgatgccc
     3661 ggcggcgtgg atcttctcca ggtcggccgc gctctgcttg tcgccttcgg cagcggcatc
     3721 ctcgagcagc atctggctgt agccgatcac ggcgttgagc ggcgtgcgga gctcgtggct
     3781 catcttggcg agaaactcgg ccttggcggc accggcgcgt tcggaatcgg cggcggcgcg
     3841 gcgcagctcg gtggcggtcg ccaggtgccg tttcatctcg ttttccagct cggcgcccga
     3901 ggcgaggatc ttggcataat agaaggccat catcgtcacg tagagcgagg cggcgatcgt
     3961 cgacacgatg ccaaaaccct gaagcgacgg ggcggacatg tccttttccg gagaatgccc
     4021 gagcagatac agggcggaga agccggcgag attggccgcg aacagagcaa gcaccgccag
     4081 ccggagcgat gaagaagagc ccaggtagaa gaaagccagc agcggaatcg tgagcaccca
     4141 tggcagcgtg ggcgagctca cgccgccgta gaagtagcag ctccacagga tgcagaagat
     4201 caggttctgg acggacagga gcaccagaag attgtagcgc ccgaccgcgc gcaggatgaa
     4261 cggaaaggcc cagaacgccg taatggaggc tgcgagaacc gcgacatc
//
LOCUS       DATAIQ010000718         7067 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_407032, whole genome shotgun sequence.
ACCESSION   DATAIQ010000718 DATAIQ010000000
VERSION     DATAIQ010000718.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 7067)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7067)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7067
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_407032"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..485)
                     /locus_tag="VHN20_11895"
     CDS             complement(<1..485)
                     /locus_tag="VHN20_11895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009208403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEX2726513.1"
                     /translation="MNVQSKVPNYVIAPAPIPTIPVVGTDQVFPIRRVYCVGRNYAEH
                     AIEMGHDPNREPPFFFQKNPDNVVLDGKFPYPPKTSDVHHEIELVVALGKGGADIPAE
                     KALDYVFGYAVGLDMTRRDLQGEAKKMGRPWEVGKAVEASAPCGPIVPASKIGHPSKG
                     AV"
     gene            complement(482..1240)
                     /locus_tag="VHN20_11900"
     CDS             complement(482..1240)
                     /locus_tag="VHN20_11900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006330235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX2726514.1"
                     /translation="MRIFGRDVPMMASLIIWCVLWEIVGRAELIKLLLPPFTDVLAAI
                     AELTAKASFWTATATTLRCFAIGMAFAILVGVPLGILMGRSKAADRLLGMWVNVFVSA
                     PLSALVPILMILFGLGEMTVILSVFLFAVWIIALDTQAGVAHMQRSLEEMARSYGASP
                     SQLYSKIIFWAALPEILAGIRIGFIRGVKGVVIGQLLVSIIGYGELFELYSRNFLLAE
                     FWALTVLLFAFAMVVAEAVGAIEKRIEYYAGVRQ"
     gene            complement(1316..2116)
                     /locus_tag="VHN20_11905"
     CDS             complement(1316..2116)
                     /locus_tag="VHN20_11905"
                     /EC_number="7.6.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019173723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2726515.1"
                     /translation="MAAAPLPRQAASTATDAVVQVRGIHKVYDTGTEALRDINLDFPR
                     GALTSLLGPSGCGKTTLLKIIAGLIEATSGEVLVNGRRVTGPGPERAFVFQDFALMPW
                     ATVIRNVAFGLELRGTPQRERHDIARHYIKEVGLSGFEERYPHELSGGMRQRVGLARA
                     LAVNADVLLLDEPFSAVDEQTRRKFQEDLLRLRENERKTFLFVTHSIEEAVYLSDQIV
                     MLSRRPGRLSRIVEPKVDRSGSPDEIRRDPHYLDTVEEIWRVLREFVD"
     gene            complement(2136..2876)
                     /locus_tag="VHN20_11910"
     CDS             complement(2136..2876)
                     /locus_tag="VHN20_11910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX2726516.1"
                     /translation="MAVWRLASIALLCGLWEVAGQIPINPAFPPFSDTLIAFAQMTAD
                     GSLPVAYAITLQPLVIGLIISATVGVSLGVLIGLRRSAEWLIAPIFIVLQAAPVAALI
                     PLVTFVYGIGLTAKTMAVCLLALPVIVLNSYKAIRNVNPSLVAMCRSFLGTPQQRIVK
                     IMLPDAAPLIFAGLRLGVSAGFIGVVLAELLITPTGIGDLITFHRSTASYPEMYATIA
                     SIVLFSALTLAVLQWVEVRLFRPERSGA"
     gene            complement(2967..3956)
                     /locus_tag="VHN20_11915"
     CDS             complement(2967..3956)
                     /locus_tag="VHN20_11915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX2726517.1"
                     /translation="MLKLTRRMALASAAALTIAGTAGAQAQTKPVRIAFGDIPSVESL
                     YFLIAVERTKEKGVPVEMSFVKSEDIAAQAVLGGQADIGVGTPYAMLQKVRAPLKLFY
                     QMNTLKFFPVVNTEAYKTWKDLDGQEVTVNSRGSGTEAIMKLAADKNKIKFKNISYVP
                     GSEVRLGALLQGTIKASILDSTNHKLLMERGGSKFAVLPLEDVSATDDALFANADFLK
                     NNAKAVDTLVESLLATIREISAKPEAAAELRTKYKLLPDLPKQLEADIVRYYKEASAS
                     KSMSPTGGTVEAAKIDLTFFNLAGQITGDPATLKVEDFWDFGPLDRAKAKLKM"
     gene            4136..4810
                     /locus_tag="VHN20_11920"
     CDS             4136..4810
                     /locus_tag="VHN20_11920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008878051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FCD domain-containing protein"
                     /protein_id="HEX2726518.1"
                     /translation="MIGADAALLQWRKMLSEIDLSVDSRLPPERDLAQRLGVQRPALR
                     KALAVLEAEGQIWRHVGRGTFVGSRPSVPPGDVSAIARMTNPGEVMRTRILLEPEVAA
                     LAALNATPASIAEMRVCLQKSRTAPTWRQYEAWDNRLHRVIAEATQNYLLLALLDTMT
                     AVRRTVTWGRLRTNKERPKPDHHSFADHDQIVAAIADRDRARAREAMRRHLEHVERNL
                     LRPQGE"
     gene            complement(4863..5900)
                     /locus_tag="VHN20_11925"
     CDS             complement(4863..5900)
                     /locus_tag="VHN20_11925"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEX2726519.1"
                     /translation="MGISRFLPSATAVLALALGIAATRPATAQDAEAAFYHGKTVRIV
                     VGYGPGGGYDVYARMVAPYLAKALDATVIVENQPGAGGLTALANIYNGQPDGLTMMLV
                     NGAGAALAQLVGHSGVRYDLAKVGHLGTVSASPWIWLVGPNSSVKAPDDVLKARKQVM
                     WSGSGPMDGLSDGAAFACEALKLECRIVMGYKGSNEAAFAVTKGEMDAIYVSDTSANN
                     YVKAGQNRAVATMARERSRFFPDTPTIFEAVKLDADQEWLFDFRATLENLGRIIVAPP
                     NLPPARLAYLQGAVKKALTDPALIAEGEKSQRYVDFVDAETTRKSTLKVVADITPEQK
                     ERVKKIVAVKQ"
     gene            complement(6061..>7067)
                     /locus_tag="VHN20_11930"
     CDS             complement(6061..>7067)
                     /locus_tag="VHN20_11930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="4,5-dihydroxyphthalate decarboxylase"
                     /protein_id="HEX2726520.1"
                     /translation="DPSVSMRNIHLTMALGEYDHARDLLDGTVKAEGIDLTVLRLEVE
                     EIFYRFTLHREWDVSEMSFAKLVALASQDDTSLVPIPVFVSRAFRHSSLYVRADSPIT
                     KPEQLAGKRVGVPEWAQTAAIYSRGMLAHEYGVDLKSIHWHQAGVNQAGRVEKVKLSL
                     PEGMRYTQVPDRSLTDMLLAGDLDAVLTARPPAPYSAGDGRLRRVFEDYRDVELNYWR
                     KTGIFPIMHTVAMRRDVYERNRWVAMNLFKAFEEAKNRSLARFRDITVSYFPLPWIPD
                     ITDVPRSVMGDDFWPYGIEPNRTTLEAFLQYAFEQGVCRRKLDADELFAPEVRSKFKV
                     "
BASE COUNT         1257 a         2281 c         2329 g         1200 t
ORIGIN      
        1 acggcgcctt tcgacggatg gccgatcttc gaggcaggca cgatcgggcc gcacggcgcc
       61 gacgcttcga ccgctttgcc gacttcccac ggccggccca tcttcttggc ctcgccctgc
      121 aagtcgcggc gcgtcatgtc gagaccaacg gcgtagccga agacgtagtc gagcgccttc
      181 tcggccggga tgtcggcgcc gcccttaccg agcgcgacga cgagctcgat ctcgtggtgc
      241 acgtccgagg tcttgggcgg atacgggaac ttgccgtcga gcacgacatt gtccgggttc
      301 ttctggaaga agaagggcgg ctcgcggttg ggatcgtggc ccatctcgat cgcgtgctcg
      361 gcgtagttgc ggccgacgca atagacgcgg cggatcggga acacctggtc ggtgccgacg
      421 accgggatag tcgggatcgg cgccggggcg attacgtagt tggggacctt ggattgcacg
      481 ttcattgtct cactcctgcg taatactcga tgcgtttctc gatggcgccg accgcttcgg
      541 cgactaccat ggcgaaggcg aacagcagca ccgtcagcgc ccagaactcg gccagcagga
      601 agttgcgcga atacagctcg aacaattccc catagccaat gatcgacacc agcaactggc
      661 cgatgacgac gcccttgacg ccgcggatga agccgatgcg gatgcccgcg aggatctccg
      721 gaagcgcggc ccagaagatg atcttgctgt agagctggct cgggcttgct ccgtaggacc
      781 tggccatctc ctcgagcgag cgctgcatat gcgcgacgcc ggcctgcgtg tcgagcgcaa
      841 tgatccagac ggcgaacagg aagaccgaca ggatcacggt catctcgccg agaccgaaca
      901 ggatcatcag gatcggcacc agcgccgaca acggcgccga cacgaacacg ttgacccaca
      961 tgccgagcag ccggtcagcg gccttcgagc ggcccatcag gatgccgagc ggcacgccga
     1021 cgaggatggc gaatgccatg ccgatggcga agcaacgcaa tgtcgtggcg gtcgcggtcc
     1081 agaacgacgc cttggccgtc aactcggcga tcgcggccag gacgtccgta aacggaggca
     1141 gcagaagctt gatgagctcg gcgcgcccga cgatctccca caatacgcac cagatgatca
     1201 gcgaggccat catcgggacg tcgcgaccaa aaatccgcat cctcgactcc atcaggcgaa
     1261 tggcgagcgg cgagcggatc actctattcc gctcgatctt cccgctacct gcaaatcaat
     1321 ccacgaattc gcgcaggacc cgccagatct cttcgaccgt atcgagataa tgcgggtcgc
     1381 ggcgaatctc gtcggggctg cccgagcggt cgaccttcgg ctcgacgatg cgcgacaggc
     1441 gtccgggccg tcgcgacagc atcacgatct ggtccgagag gtagacggcc tcctcgatcg
     1501 agtgcgtgac gaacaggaag gtcttgcgct cgttctcgcg cagccgcagc aggtcctcct
     1561 ggaacttgcg gcgcgtctgc tcgtcgacgg ccgagaacgg ctcgtcgagc aacagaacgt
     1621 cggcgttgac ggccagtgcc cgggccaggc cgacgcgctg gcgcatgccg cccgacagct
     1681 cgtgcgggta gcgctcctcg aatccggaca ggccgacttc cttgatgtaa tggcgcgcaa
     1741 tgtcgtggcg ttcgcgttgc ggcgtgccgc gcagctcgag cccgaaggcc acgttgcgga
     1801 tcaccgtcgc ccaaggcatc agggcgaaat cctggaacac gaaggcccgc tccgggccag
     1861 ggccggtcac gcggcggccg ttgacgagaa cctcgccgga ggtcgcctcg atcagcccgg
     1921 cgatgatctt gagcagcgtc gtctttccgc agccgctcgg gccgagcagc gaggtcagcg
     1981 cgccacgcgg gaaatcgagg ttgatgtcgc gcagcgcctc ggtgccggtg tcgtagacct
     2041 tgtggatgcc gcgcacctgc acgacggcat ccgtcgcggt cgacgcggcc tgtcgcggca
     2101 acggcgccgc agccattgtg gaaacggatt gcatttcagg ctccgctcct ctcgggacgg
     2161 aacagccgca cctcgaccca ttgcaggacg gcaagggtca gcgcggagaa aagcacgatc
     2221 gacgcgatcg ttgcgtacat ctccgggtag ctggccgtgg aacggtggaa ggtgatcaga
     2281 tcgccgatcc ccgtcggcgt gatcagcagc tccgcgagca cgacgccgat gaagccggca
     2341 gaaacaccga ggcgaaggcc ggcgaagatg agaggcgccg cgtccggcag catgatcttg
     2401 acgatccgct gctgcggcgt gccgaggaac gaccggcaca tcgcgaccag cgacggattg
     2461 acgttgcgga tcgccttgta ggaattgagc acgatcacgg gcagcgccag caggcagact
     2521 gccatcgtct tggccgtgag cccaatgccg tagacgaagg tgacgagcgg gatcagcgca
     2581 gccacgggcg ccgcctgcaa gacgatgaag atcggcgcga tgagccattc cgcgctccgc
     2641 cgcaggccga tcagcacgcc gagcgaaacg ccgacggtgg ccgagatgat caggccgatc
     2701 accagcggct gcagcgtgat cgcgtaggca accggcaacg atccatccgc cgtcatttgc
     2761 gcgaaggcga tcaacgtgtc gctgaaaggc gggaaggccg gattgatcgg aatttgtccg
     2821 gcgacttccc acaggccgca gagcagggcg atcgaggcga gccgccacac ggccattccg
     2881 ggcatccata tgcgggatgc ccgttgaggt tccagcgtga cggacgccgc gctggattgt
     2941 tcgaccaaag ccatccgttg gccccgttac atcttgagct tcgccttggc gcgatcgagc
     3001 ggcccgaagt cccagaagtc ctcgaccttg agggtcgccg gatcgcccgt gatctggccg
     3061 gcgagattga agaacgtgag atcgatcttg gccgcctcga ccgtgccgcc cgtcggcgac
     3121 atgctcttcg acgccgacgc ttccttgtag tagcggacga tgtcggcttc gagctgcttc
     3181 ggcagatcgg gcaggagctt gtatttggtg cgcagctctg ccgccgcttc cggcttggcg
     3241 ctgatctcgc ggatcgtggc cagcaggctt tcgaccagcg tatcgacggc cttcgcgtta
     3301 ttcttcagga agtcggcatt cgcgaacagc gcgtcgtcgg tggcgctgac gtcttcgagc
     3361 ggcagcacgg cgaacttgct gccgccgcgc tccatcagaa gcttgtggtt agtcgagtcg
     3421 aggatcgacg ccttgatggt gccctgaagc agcgcgccga ggcgcacttc cgaacccggc
     3481 acatagctga tgttcttgaa cttgatcttg ttcttgtcgg cggccagctt catgatcgct
     3541 tcggtgccgg agccgcgcga gttgaccgtc acctcctggc cgtcgagatc cttccaggtc
     3601 ttgtaggcct cggtgttgac caccgggaag aacttcagcg tgttcatctg gtagaacagc
     3661 ttgagtgggg cgcgcacctt ctgcagcatg gcgtaaggcg taccgacccc gatatccgcc
     3721 tgcccgccaa gcaccgcctg ggcggcgatg tcttccgact tgacgaacga catttcgacg
     3781 gggacgccct tctccttggt gcgctcgacc gcgatcagga agtagagcga ttcgacgctc
     3841 ggaatgtcgc cgaaggcgat ccgcacgggc ttcgtctgcg cctgtgctcc ggccgtgccc
     3901 gcgatcgtca gcgcagcggc gctcgccaaa gccatgcgtc gggtcagttt cagcattgaa
     3961 ctcctccctg ctgtttcacc tgacgtgcca gtcggcacgc gatgaccaat gtttaccaat
     4021 cgcgccgcag gatgtgccgc cgacaggcaa acctgtcaag tgaatctgaa acatgcgttg
     4081 acgtcttcac caaaatttgc ataaccaatc atcgaattgg tagcaggatg aaacgatgat
     4141 cggagccgac gccgccctcc tccagtggcg caagatgctg agcgagatcg acctgtcggt
     4201 ggacagccgg ctgccgccgg agcgtgacct cgcgcagcga ctcggcgtgc agcgcccggc
     4261 gctgcgcaag gcgctcgcgg tgctggaagc ggaagggcag atctggcgcc acgtcggcag
     4321 gggcacgttc gtgggcagcc gcccgtccgt gccgcccggc gacgtgtcgg cgatcgcccg
     4381 catgaccaat ccgggcgagg tgatgcgcac gcgcattctg ctcgagccgg aagttgccgc
     4441 cctggcggcg ctcaacgcga cgccggcgtc gatcgccgag atgcgcgtgt gcctgcagaa
     4501 gagccgaacg gctccgacat ggcggcaata cgaggcgtgg gacaaccgcc tgcatcgcgt
     4561 catcgccgaa gcaacgcaaa actatctgct gctggcgctg ctcgacacga tgacggcggt
     4621 gcgccgcacg gtcacctggg gacggctgcg caccaacaag gagcggccga agccggacca
     4681 tcacagcttt gccgaccatg accagatcgt cgcggcgatc gccgaccgcg accgggcgcg
     4741 cgcccgcgag gccatgcgcc ggcacctcga gcacgtcgag cgcaatctgc tccgccccca
     4801 gggggagtga acctactctc ccgtggatct cggctttccg agatccacgg caggaatttg
     4861 ggttactgct tcaccgcgac gatcttcttc acacgctctt tctgctcggg cgtgatgtcg
     4921 gcgaccacct tcaacgtgct cttgcgcgtc gtctcggcgt cgacgaagtc cacgtatcgc
     4981 tggctcttct cgccttcggc gatcagggcc gggtcggtga gcgccttctt caccgcccct
     5041 tgcaggtagg cgagcctagc cggcggcagg ttgggcggcg cgacgatgat gcggccgaga
     5101 ttctcgagcg tcgcgcggaa gtcgaacagc cattcctggt ccgcatcgag cttcaccgct
     5161 tcgaagatgg tcggcgtgtc gggaaagaag cgcgagcgtt cgcgcgccat ggtggcgacc
     5221 gcccggttct ggcccgcctt cacgtagttg ttggcggagg tgtcggagac gtagatcgca
     5281 tccatctcgc ctttcgtgac cgcgaaagcg gcctcgttgc tgcccttgta gcccatgacg
     5341 atgcggcact cgagcttgag agcctcgcac gcgaaagcgg cgccgtcgga gagaccgtcc
     5401 atcggaccgc tgcccgacca cattacctgc ttgcgggcct tgagcacatc gtcgggcgcc
     5461 ttgaccgatg agttcgggcc gaccagccat atccatggcg aggcgctgac ggtgccgaga
     5521 tgcccgacct tggcgaggtc gtagcgcacg cccgaatggc cgacgagctg agccagggcc
     5581 gcgccggctc cgttgacgag catcatggtc agcccgtccg gctgcccgtt gtagatgttg
     5641 gcgagggccg tgagcccccc ggcgcccggc tggttctcca cgatcaccgt ggcgtcaagc
     5701 gccttggcga gatacggcgc gaccatgcgc gcgtagacgt catagccgcc ccccggcccg
     5761 tagccgacga cgatgcgcac ggtcttgccg tgatagaacg cggcctccgc gtcctgcgcc
     5821 gttgccggcc gggtcgccgc gatgccgagc gcgagtgcca gcaccgccgt cgcagagggc
     5881 aggaaacgtg agatgcccat gggtcctcca atgtgtcgtt tttcgagaga ctaggccgaa
     5941 accgcccggt tggcgaatag ggtagccggc aggggtaatc gggcaatagg cactcggcag
     6001 catgggcctg gccacgcacc gacggccgcc tgcggcgagc tccgacggcc ctcgaccgcc
     6061 tcagaccttg aacttgctgc gcacctccgg ggcgaacagc tcgtccgcgt cgagcttgcg
     6121 gcggcacacg ccctgctcga acgcgtattg caggaaggct tcgagcgtgg tgcgattcgg
     6181 ctcgatccca tagggccaga aatcgtcgcc catcacgctt cgcggcacgt cggtgatgtc
     6241 ggggatccac ggcagcggaa aatacgacac cgtgatgtcc ctgaagcgcg ccaagctgcg
     6301 gttcttggcc tcctcgaagg ccttgaacaa gttcatggcg acccagcggt tgcgctcgta
     6361 gacgtcgcgg cgcatggcaa ccgtgtgcat gatcgggaag atgccggtct tgcgccagta
     6421 gttgagctcg acgtcgcggt aatcctcgaa cacccgccgc aggcggccgt cgccggcgct
     6481 gtacggggcc ggcgggcgcg ccgtcaggac ggcatcgaga tcgcccgcga gcagcatgtc
     6541 ggtcagcgaa cggtccggca cctgcgtgta gcgcatgcct tccggcaggc tgagcttcac
     6601 cttctcgacg cggccggcct ggttgacgcc ggcctgatgc caatggatcg atttgagatc
     6661 gaccccgtat tcgtgggcga gcatgccgcg cgagtagata gccgcggtct gcgcccattc
     6721 cggcacgccg acccgttttc ccgcgagttg ctcgggcttg gtgatcgggc tgtcggcacg
     6781 cacgtaaagc gaggaatgcc ggaaggcgcg cgagacgaag acggggatcg gcacgaggct
     6841 ggtgtcgtcc tgcgaggcca gcgccacgag cttggcgaac gacatctcgg acacgtccca
     6901 ctcgcggtgc aaggtgaagc ggtaaaagat ctcttcaacc tcgagacgca ggaccgtcag
     6961 gtcgatgccc tcggccttga cagtgccgtc gagcaggtcg cgcgcgtggt cgtattcgcc
     7021 cagcgccatg gtcaggtgga tattgcgcat cgacacactc ggatcag
//
LOCUS       DATAIQ010000719         2162 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_452716, whole genome shotgun sequence.
ACCESSION   DATAIQ010000719 DATAIQ010000000
VERSION     DATAIQ010000719.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2162)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2162)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2162
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_452716"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..201
                     /locus_tag="VHN20_11935"
     CDS             <1..201
                     /locus_tag="VHN20_11935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX2726521.1"
                     /translation="GRVAAVNSTFTGTTGSLGQFQSGVVAALIGAGPAALLGGLGAVG
                     LALLWIRLFPDLWRLQSIVAEK"
     gene            450..1424
                     /locus_tag="VHN20_11940"
     CDS             450..1424
                     /locus_tag="VHN20_11940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEX2726522.1"
                     /translation="MITRRVVCGALLAGAVLAPALAHAQAYPNRSLRLLVPYAAGGGT
                     DAIARLVANGVGEKLGQTMVVENNGAAGGNVATTQAAAAAPDGYTVLMANQGPMVVNP
                     HLFRNMKVDPLTAFDPVTLITATPLVLVVPHDSKFKSFTELMDFAKKNPGKLTYGSAG
                     NGSASHLATVLLGHLAKVDAVHVPYRGAGPALNDLLGGRTDFMITTLPSVVGLIEGGQ
                     MHPIAVTTKARTKKYPDVPSIAESGFPDYEAAAWYGFVVPKGTPKEIADKLRQATIET
                     ITKGVVRDRLEAEGAEPIGNSPAEFAAMMKAESARWADVVKQTAIKVD"
     gene            1598..1819
                     /locus_tag="VHN20_11945"
     CDS             1598..1819
                     /locus_tag="VHN20_11945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726523.1"
                     /translation="MPLLFANLFRLPPSIPAPDKAARTDRLADLERLLAEIAAPHPHH
                     DEGHRHGRDEGECMARRQDYAACLPEQAA"
     gene            1923..>2162
                     /locus_tag="VHN20_11950"
     CDS             1923..>2162
                     /locus_tag="VHN20_11950"
                     /inference="COORDINATES: protein motif:HMM:NF015317.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqhA family protein"
                     /protein_id="HEX2726524.1"
                     /translation="MLVAAAGALIGALLMFWEGGGKLAGALWALLVANDDAKSLGGAV
                     MGATDALLFGVVLLVFAFAITFGFVFDLPADARERL"
BASE COUNT          345 a          733 c          730 g          354 t
ORIGIN      
        1 gggcgcgtgg cggccgtgaa ttccaccttc acgggcacga ccggaagcct cggccagttc
       61 cagtccggcg tcgttgcggc gctgatcggc gccggcccgg cagccctgct cggcggcctc
      121 ggcgccgtcg ggctcgcgct gctctggatc aggctctttc ccgacctgtg gcgccttcag
      181 agcatcgtcg cggagaaatg acgcgacggt ccgcgtcggc ccatgctttc ggccggagag
      241 cggatttcca tcaccgcctg gcccgcgggg acgcagatgc gagggatcga accagatccg
      301 cgaaccgggg ttaagcctgg ggcgacgcgg cactgttgcg gcgcccaccg gtatgcaagg
      361 aggtcgccgc cttttatgat tggcgaacgc cggccgggtc ggcgatcgcc ggagccagac
      421 gcggctacgg cccaacgaag gagtaggcga tgatcactcg tcgcgttgtc tgtggggcgc
      481 ttctcgccgg agcggtgctc gcccccgctc tcgcccacgc gcaagcatat ccgaaccgct
      541 cgttacgtct gctcgtgccc tatgcggccg gcggcggcac cgatgcgatc gcccgtctcg
      601 tggcaaacgg cgtcggcgag aagctcggcc agaccatggt cgtcgagaac aacggcgccg
      661 cgggcggcaa cgtggcgaca acgcaggcgg ccgcggccgc gccggacggc tacacggtgc
      721 tgatggccaa ccaggggccg atggtcgtca atccgcacct gttcaggaac atgaaggtcg
      781 atccgctcac cgccttcgac ccggtcacgc tgatcacggc gacgccgctg gtgctggtcg
      841 tgccccatga ctcgaagttc aagagcttca ccgagctcat ggacttcgcc aagaagaacc
      901 cgggcaagct gacctacggc tcggccggca acggatcggc cagccacctg gcgacagtgc
      961 tgcttggcca tctcgcgaag gtggacgcgg tgcatgtccc gtatcgcggc gccggcccgg
     1021 ccctcaatga tctgctcggc gggcgcaccg acttcatgat caccacgctg ccgtcggtcg
     1081 tcggcctcat cgaaggcggg cagatgcacc cgatcgccgt cacgaccaag gcgcggacga
     1141 agaaataccc cgacgtgccg tcgatcgcgg agagcggatt tccggattac gaggccgctg
     1201 cgtggtacgg cttcgtcgtg ccgaaaggca ccccgaagga gatcgccgac aagctgcgcc
     1261 aggcgacgat cgagaccatc accaagggcg tcgtgcgcga tcgcctcgag gccgagggag
     1321 ccgagccgat cggcaacagc ccggcagaat tcgccgccat gatgaaggcc gaatccgcgc
     1381 gctgggccga tgttgtcaag cagaccgcga tcaaggtgga ctgagacccg ccggggcggc
     1441 ggggctggac cctgccgcat gcccgcagcg cggaacggca tcacaggcgg ccacaccccg
     1501 ccggtgatgc tttttggcgt tggttaaaat cgtaaccatc cgcgacactt gggcgaaacc
     1561 ggaggctgtt aaaagggtcc cagcccaagg aacccggatg ccgttgctct tcgccaatct
     1621 cttccgcctg ccgccgtcga tcccggcgcc cgacaaggct gcccgcaccg accggctcgc
     1681 cgacctcgag cggctgctcg ccgagatcgc ggcgccacac cctcatcacg acgagggcca
     1741 tcggcatggg cgcgacgagg gcgagtgcat ggcacgccgg caggattacg ccgcctgctt
     1801 gcccgagcag gccgcctgat tccataacgc ttgatatccg gcctcgtttg gcgcgaggct
     1861 cgcgaatgcc tgccaaactc agctcagcct ttctccgcct cgccctgttg ttgcgcctgc
     1921 tcatgctggt cgccgcggcg ggcgcgctga tcggcgcgct gctgatgttc tgggaaggcg
     1981 gcgggaagct ggcgggcgcg ttgtgggcgc tccttgttgc caatgacgac gcgaagtcgc
     2041 tggggggcgc tgtcatgggc gccaccgatg ccttgctgtt cggagtcgtg cttctggttt
     2101 ttgcattcgc gatcacgttc ggcttcgtct tcgatctgcc ggccgatgcg cgcgagcgcc
     2161 tg
//
LOCUS       DATAIQ010000720         2601 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_407104, whole genome shotgun sequence.
ACCESSION   DATAIQ010000720 DATAIQ010000000
VERSION     DATAIQ010000720.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2601)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2601)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2601
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_407104"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..421)
                     /locus_tag="VHN20_11955"
     CDS             complement(<1..421)
                     /locus_tag="VHN20_11955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010686116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HEX2726525.1"
                     /translation="MAHDHRDHKGAQKLYELIQDVKICMMTTVEPDGSLHSRPMYNQD
                     ADQAGDLWFFTRISSPKVTEISKDGQINLGFSNPSKQDYVSISGRAEIVRDRAMINEK
                     WSAPLKAWFPDGKDDPQIALIRVRPEKGEYWDSPSSTL"
     gene            complement(573..806)
                     /locus_tag="VHN20_11960"
     CDS             complement(573..806)
                     /locus_tag="VHN20_11960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018236843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF378 domain-containing protein"
                     /protein_id="HEX2726526.1"
                     /translation="MKAINIVTLLLVIVGGLNWGLVGLFSFDLVAAIFGNGSLLARLV
                     YILVGASALWQLVPLAKAISADQPRALHGSSVR"
     gene            1006..1569
                     /locus_tag="VHN20_11965"
     CDS             1006..1569
                     /locus_tag="VHN20_11965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011085260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="HEX2726527.1"
                     /translation="MGLRQYRIGPKLRALRLRKKLGLVELGQHTGLSAAMLSKIERGL
                     LFPTLPTLLRIALVFGVGLEHFFTEESGRARVTVVRKADRLRLPDRPGADPPAYLFES
                     LDFPVTESKITAFHAEFPPDGPPSELHRHEGAELIYVLNGKLAVRVDDEETILGRGDA
                     MYFDSGAAHSYRRHGHAACAAVVIVVP"
     gene            2148..>2601
                     /locus_tag="VHN20_11970"
     CDS             2148..>2601
                     /locus_tag="VHN20_11970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007877920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase small subunit"
                     /protein_id="HEX2726528.1"
                     /translation="MDTEPAGPRVREITEQQQRFVREYVLDRNATQAAIRAGYTPRNA
                     RQTGSRLKCHARVGAAIRELLGDSPPARSRPGLTPKQQRFVVEYAVDHNATQAAVRAG
                     YSPRYAHPIGSRLKRHKRVGAAIRERLGDAPDAWRRDPTPLQQRLALEY"
BASE COUNT          470 a          849 c          830 g          452 t
ORIGIN      
        1 tcaacgtcga tgacggactg tcccaatatt cgcccttttc gggacgcacg cggataagcg
       61 cgatctgcgg atcgtccttg ccgtccggga accacgcctt cagcggcgcg ctccatttct
      121 cgttgatcat cgcgcggtca cgcacgatct cggcacggcc ggaaatcgag acgtaatcct
      181 gcttcgacgg attggagaaa ccgaggttga tctggccatc cttggaaatc tccgtcacct
      241 taggggagga gatcctggtg aagaaccaca ggtcgcccgc ctggtcggca tcctggttgt
      301 acatggggcg gctgtgcagg gagccgtctg gttcgactgt cgtcatcatg cagattttca
      361 cgtcttggat gagctcatag agcttttgcg cacccttatg gtcgcggtgg tcgtgtgcca
      421 tgttcatctc ctgaatcgac ggtagcgagc gggtgttcca ttccggctcg ggcactggtg
      481 gccagcgggg agtgggcggc acggggaagg gaacatgccg ctcacccacg cgacgcggac
      541 ccgtcgccgt gaggcgcggg gtcgcatgcg tctcagcgca cggatgatcc gtgcaacgcc
      601 cgcggctggt cggcgctgat tgccttcgcc aacggcacga gctgccacag ggcggacgcg
      661 ccgaccagga tgtagacgag tcgcgcgaga agcgaaccgt tgccgaaaat ggcggcgacg
      721 aggtcgaagc tgaacagccc cacgagcccc cagttcaaac caccgacgat gacgagaagc
      781 agcgtcacga tgttgatggc cttcatgcat ttgtctcctt cgttggcaat gccggcgaat
      841 gcggcgggcg ccgttggcgc gtcggctgca tctgggccga gtaaccttga cgtgcaaggg
      901 ccaatttgca cattaagaaa agtcgttttc acacggagaa acaatcgcgc cgggtttttc
      961 ccgccgcgaa aacaaaggcg agaaatggtc tcggagacgc tctcggtggg cctgcggcag
     1021 taccggatcg ggccgaagct gcgcgcgctg cgcttaagga agaagctcgg tctcgtggag
     1081 ctcgggcagc acacgggcct gtcggcggcg atgctgtcga agatcgagcg cgggctgctg
     1141 ttcccaactc tgccgacgct gctccgcatc gccctcgtgt tcggcgtggg gctcgagcac
     1201 ttcttcaccg aggaatccgg ccgggcgcgg gtcaccgtgg tgcgcaaggc ggatcgcctg
     1261 cgactgccgg accggcccgg cgccgacccg cccgcctatc tgttcgagag cctcgacttc
     1321 ccggtcaccg aaagcaagat caccgccttc catgccgagt tcccgcccga cgggccgccg
     1381 tccgagctgc accgccacga gggcgccgag ctgatttacg tcctcaacgg taagctcgcg
     1441 gtgcgcgtgg acgacgagga gacgatcctc ggccgcggcg acgcgatgta tttcgactca
     1501 ggcgcggcgc acagctaccg gcggcatgga cacgccgcct gcgctgccgt cgtcatcgtg
     1561 gtgccttaac acgcgcgtca acgggcagaa ggaaagaatc tcgcctaacc caactacgta
     1621 attggggata aattcacatt tgtgcgttga cttacgcgcg gcgagcgccc tactgaattc
     1681 gacgatgcga attccgcccg gagctgaaag cggctgccgg gccatttttt ttggaattgg
     1741 cgagcgcgaa tccgaccgcg aaaatgaggt cgcgtcgcga agcccaggca tggtgctatc
     1801 gttccaaccg cggtcagccg ttgcgcgtgc acgcaatgcc gtagcgtgtc gtcaatccgc
     1861 tccgttcggc gctttgtgcc ggtcgctcgc ggccttggcg cgatcgtgac gcgacgcacc
     1921 gccttcagcg catccgatcc gtccctccaa aacgttccgg cgcaaccagc gcccgacgga
     1981 ggggaggctc gatcacgttc ggtcgccgcg cgagggcgac gtcaccacat cttcccaacc
     2041 gtggagtcgt ctcatgaacg ctgtttcgac gcacacccct ccgaccaacg cgacggccgc
     2101 gaacgtcaac atccttccga gactcaattc gtgaaacgag catcaagttg gacaccgaac
     2161 ccgccggacc gcgcgtgcgc gagatcacgg aacagcagca acgcttcgtc cgcgagtacg
     2221 tgctcgaccg caacgccacg caggcggcga tccgcgccgg ctacactccg cgcaatgccc
     2281 ggcagaccgg ttcccggctc aagtgccacg cgcgagtcgg cgcggcgatt cgcgagctcc
     2341 tgggagattc tccgcccgcg cggtcgcggc cgggcctgac gccgaagcag caacgctttg
     2401 tcgtcgagta tgcggtcgac cacaacgcca cgcaggctgc ggtccgcgcc ggttacagtc
     2461 cgcgctatgc ccacccaatc ggttcccggc tcaagcgcca caagagggtc ggcgcggcca
     2521 tccgcgagcg cctgggagac gcgccggatg cgtggcgacg ggatccgacg ccactgcagc
     2581 aacggctcgc cctcgagtat c
//
LOCUS       DATAIQ010000721         2185 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_407121, whole genome shotgun sequence.
ACCESSION   DATAIQ010000721 DATAIQ010000000
VERSION     DATAIQ010000721.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2185)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2185)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2185
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_407121"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..114
                     /locus_tag="VHN20_11975"
     CDS             <1..114
                     /locus_tag="VHN20_11975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003604409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase"
                     /protein_id="HEX2726529.1"
                     /translation="YWDSPSSTLIHLYGYAKAALTGSPPTELSEQKKVNLR"
     gene            418..1122
                     /locus_tag="VHN20_11980"
     CDS             418..1122
                     /locus_tag="VHN20_11980"
                     /inference="COORDINATES: protein motif:HMM:NF024809.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HEX2726530.1"
                     /translation="MPDLPRLIVLPPSHYCERARWGLDYAGVAYTEERWAVGCHVPLA
                     RRIAPATTLPILVADNAVIQGSGRILDWAGVPGVDAELEERFDRRIGVLVRQYIYAAT
                     LSDSLSGVRDALLDGVSAAQARLSRVMWPVVRRLMIAGMDARPALLGKVEAQLGAELD
                     WFDHRVVGRRYIVGDQLGRADITAASLLAPLVRPRACPLYRQVTLPARVEETLTTWSA
                     RPALQWARCLYAAHRP"
     gene            1231..1869
                     /locus_tag="VHN20_11985"
     CDS             1231..1869
                     /locus_tag="VHN20_11985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013501518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-binding protein"
                     /protein_id="HEX2726531.1"
                     /translation="MPNYLLLALESALAVFGIRSIYEQPRYEVVASVGNVEIRRYAPR
                     LGAEVSVVADIPEKGRNEAFRILADYIFGQNREGAEIPMTTPVATGAPAAARPRGREI
                     AMTAPVETAGTPDGVIMRFFLPTTVTRDNAPVPNDARVKIVEVPEETIAALTFSGRGT
                     EEALADNKRELLGALASSPWHAAEEPYALFYDPPFTLPFLRRNEVAVRVRRT"
BASE COUNT          398 a          729 c          701 g          357 t
ORIGIN      
        1 tattgggaca gtccgtcatc gacgttgatc cacctctacg gctacgccaa ggcggcgctc
       61 accggctcgc cgccgacgga gttgagcgag cagaagaagg tgaacttgcg ctgacagccc
      121 ccgcacccat gtcagccccg cgcgcataag agcatgaggc aactatgaag cagcaagaaa
      181 aatcaccgcg tccgggatca aagcgggtaa agaccgccga caccgaagac accaggccaa
      241 agctcgaacg cgctcagaaa gaagcggcgg acgagcggaa aaaggcggct cccagtaagg
      301 tcggaccagt gatgcgaaaa gcttgctgcg cctgaacccg cgagcgccgc tgcccggatc
      361 tctgcgttga gccccgatga acaagcccgc acgggccgac acatggcttg cacccgcatg
      421 cccgaccttc cccgcctgat tgtccttccc ccctcgcatt actgcgagcg ggcgcggtgg
      481 ggcttggact acgcgggtgt cgcctacacg gaggagcgct gggcagtcgg gtgccacgtg
      541 cccctggcca ggcgcatcgc gccggcgaca acgctgccga tcctcgttgc ggataacgcg
      601 gtcatccaag gcagcggccg cattctcgat tgggcgggcg tgccgggcgt ggatgccgag
      661 ttggaggagc ggttcgaccg ccgtatcggt gttctggtgc ggcaatacat ttacgccgcc
      721 acgctcagcg atagcctctc cggcgtgcgc gacgctctgc tcgatggcgt gtccgccgcg
      781 caagcgcgcc tcagccgtgt catgtggccg gtggttcgcc gtctcatgat cgccggcatg
      841 gatgcgcgcc cggcgctcct cgggaaggtc gaggcgcaac ttggcgccga actcgactgg
      901 ttcgatcacc gtgtcgtcgg tcggcgctat atcgtcggcg accagctggg tcgcgccgac
      961 atcacggcag cgagcctgct cgcaccgctg gtccggcccc gcgcctgccc tctctatcga
     1021 caggtcaccc ttccggcacg ggtcgaggag acattgacga cgtggagcgc acgtccagcg
     1081 ctccagtggg cgcggtgcct gtacgccgcg caccgcccgt gagcccgcga atgccgcgcc
     1141 tcacgaccct catgtcatga gcgtggcgat catgcgccgt cttcttccgc agtcgcccga
     1201 gagatggcca acgacacgat aggaagacct atgcccaatt acctgctcct ggcgcttgaa
     1261 agcgcccttg cggtcttcgg catccgatcg atctatgagc agccgagata cgaggtcgtc
     1321 gccagcgtcg ggaacgtcga aattcgtcgc tacgcccctc ggctcggtgc agaagtgagc
     1381 gttgttgctg acatcccgga aaaagggcgc aacgaggcgt tccgcatcct cgccgattat
     1441 attttcggcc agaaccgcga aggcgcggaa atccccatga cgaccccggt ggcaactggc
     1501 gcgcccgcgg cggcgcgccc gcgggggcgc gagattgcca tgacggcgcc cgtcgagacg
     1561 gccggcacgc cggacggcgt catcatgcgc ttcttcctgc cgacgacggt cacgcgcgat
     1621 aacgcccccg tgcccaatga cgcgcgcgtc aagatcgtgg aagttccgga ggagacgatc
     1681 gccgcgttga ccttctcggg gcgcggcacc gaggaggccc tggctgataa caagcgcgag
     1741 ctcctcggcg cgctcgcgag ctcgccgtgg cacgccgcgg aggagccgta cgcgttgttc
     1801 tacgacccac ccttcacact cccatttctg cgccgcaacg aggtggccgt gcgggtgagg
     1861 cgtacatgag gggatcgtct tcgcggcaga gcctcaaaac gagggctggg tgaggctgta
     1921 gattggtaag gcgcgcctcg gcgatcagtg ggcgcgattt atgacaaaca tatttctcgc
     1981 ccgcagcagg cgtctcgacc ccttatgcgt tggccgccag attcgacgcg gacatttccg
     2041 gatcagcggg caaggctcat gcgcacgaga agcaccctga ccgtcacggc gaatttatcc
     2101 aacttcgtcg tggcacacgt cgaggtcgcc tgctcaaacg caacccgttc aagatccgga
     2161 atccgaacga ccagcggcgg cccag
//
LOCUS       DATAIQ010000722         2225 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_63097, whole genome shotgun sequence.
ACCESSION   DATAIQ010000722 DATAIQ010000000
VERSION     DATAIQ010000722.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2225)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2225)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2225
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_63097"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(72..434)
                     /locus_tag="VHN20_11990"
     CDS             complement(72..434)
                     /locus_tag="VHN20_11990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018261593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726532.1"
                     /translation="MVRSAQPRSPRAGLPSAGVFAGPVAWFISTAGNYALSPWVCAHK
                     QPAVPALAAAMLAVSLYGAFLSWRALAGTPAAPSDETGAGRPHRFVAGLGIMMSLLFA
                     LVIIVQGAAGVVFTGCER"
     gene            complement(438..1037)
                     /locus_tag="VHN20_11995"
     CDS             complement(438..1037)
                     /locus_tag="VHN20_11995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011971122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit 3"
                     /protein_id="HEX2726533.1"
                     /translation="MRHRPVQDVSTLPDHAFGPRMTMFWGTLGFMTLEGTGFALAAGA
                     YLYLAWLNPQWPLADKPPDLLWASLLTLVLLVSAWPNQIAKRNAKKEDLGAVRRDLVI
                     MSVVSVAILALRAFEFTTLNVRWDQNAYGSIVWVLLGLHTAHILTDAVDTFVLTALMF
                     TRHGHGKRFSDVEDNAVYWDFVVLSWLPIYGLVYWASRV"
     gene            complement(1034..>2225)
                     /locus_tag="VHN20_12000"
     CDS             complement(1034..>2225)
                     /locus_tag="VHN20_12000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016735648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cytochrome c oxidase subunit 4"
                     /protein_id="HEX2726534.1"
                     /translation="MDRLIGTQFFNPAEGGDALLWQHLFWFFGHPEVYIIFLPAAGMV
                     SAILPAFARRPVFGYLPLVLSAIAVGFLSFGLWVHHMFTAGVPQLGASFFTASSMLIA
                     IPNGIQIFCWLATLWDGRPVFKTPLLFVLGFIFTFVIGGLTGIMLAAVPIDTQVHDTY
                     FVVAHFHYVLIGGAVFPLLGAVYYWFPKVTGRLMSERLGKWNFWLFFVGFNGAFFPMH
                     ILGLQGMPRRVYTYQPEMGWGDLNLLATGGAVLMLVSFVLFLWNAVASARGGLFAGSN
                     PWDADTLEWVTSSPPPAYNFERIPFVTSRAPAWAERESLPVVTGLAVDYREVVVSTVS
                     EARADVRETSPDPSIWPLLAAIAVAITFLASIFTPWAVVWGSLLVGVTLIGWFWPKTR
                     EDDE"
BASE COUNT          454 a          719 c          769 g          283 t
ORIGIN      
        1 ccagtggacc tcgcccgcat gcgcggaagc ttcgcgcgcg acgagacagg cgaggacgac
       61 gagcagcgcc ctcatcgctc acatcccgtg aagacgactc cagcggctcc ctgcacgatg
      121 atgaccagcg cgaacagcag gctcatcatg atgccgaggc cggcgacgaa gcggtgcggc
      181 cggccggccc cggtctcgtc ggaaggcgcg gcgggtgtgc cggcaagcgc acgccaggac
      241 aggaaagccc cgtagaggct caccgccagc atggcggcgg cgagggccgg cacggccggc
      301 tgcttgtgcg cgcagaccca gggcgacaga gcgtaattgc cggcggtgct gatgaaccac
      361 gccaccggcc cggcaaagac cccggccgag ggcagtcctg cgcgtggaga tcgtggctgt
      421 gccgatcgta ccatgcgtca cactcgcgag gcccagtaga cgaggccgta gatcggcagc
      481 cacgacagca cgacgaagtc ccagtagacc gcgttgtcct cgacgtcgct gaagcgcttg
      541 ccgtgcccgt ggcgcgtgaa catcagcgcg gtcagcacga aggtgtcgac cgcgtcggtc
      601 aggatatggg cggtatgcag gcccagcaga acccaaacga tcgagccata ggcattctgg
      661 tcccaccgca cgttcagcgt cgtgaactcg aaggcgcgaa gcgccagaat ggcgaccgac
      721 acgacggaca tgatcacgag gtcgcgccgg acggccccga gatcctcttt cttggcgttg
      781 cgtttggcga tctggttggg ccacgcgctc acgagcagca cgagggtcaa aaggctcgcc
      841 cagagcagat ccggcggctt gtccgccagc ggccattgcg ggttgagcca cgcgaggtag
      901 aggtaggccc cggccgcgag ggcgaagccc gtgccctcga gcgtcatgaa gccgagggtg
      961 ccccagaaca tcgtcatgcg cggcccaaag gcatggtcgg gcagcgtcga gacgtcctgg
     1021 acggggcggt gcctcattca tcgtcctccc tggttttggg ccagaaccag ccgatcaacg
     1081 tgacgccgac cagaaggctc ccccacacca cggcccacgg cgtgaagatc gaagccagga
     1141 aggtgatcgc gacggcaatc gccgcgagga gcggccagat gctgggatcg ggagacgtct
     1201 cgcgcacgtc ggcgcgggcc tcgctgaccg tgctgacgac cacctcgcgg tagtcgacgg
     1261 cgagcccggt cacgaccggc aggctctcgc gctcggccca ggcgggggcg cggctcgtca
     1321 cgaacggaat gcgttcgaaa ttgtaagcgg gcgggggcga cgaggtcacc cattcgagcg
     1381 tgtcggcatc ccacggattg ctgccggcga aaagaccgcc gcgcgcgctc gcaacggcgt
     1441 tccagaggaa caggacgaag ctgaccagca tcagcacggc gccgccggtg gcgagcaagt
     1501 tgagatcgcc ccaccccatc tccggctgat aggtgtagac gcggcgcggc atgccctgca
     1561 gcccgaggat gtgcatcggg aagaacgccc cgttgaagcc gacgaagaac agccagaaat
     1621 tccacttgcc cagccgctcg ctcatgaggc ggccggtcac cttgggaaac cagtagtaga
     1681 cggcgccgag cagcgggaac acggcgccgc cgatcagcac gtaatggaaa tgcgcgacga
     1741 cgaagtatgt gtcgtgcacc tgcgtgtcga tcggcaccgc agccagcatg atgccggtga
     1801 gcccgccgat cacgaaggtg aagatgaagc cgagcacgaa cagcagcggc gtcttgaaga
     1861 ccggccgtcc gtcccacagc gtcgccagcc agcagaagat ctggatgccg ttcgggatcg
     1921 cgatcagcat gctcgaggcg gtgaagaagc tggcgccgag ttgcggcacc ccggccgtga
     1981 acatgtggtg gacccagagc ccgaacgaca gaaagccgac ggcgatcgcc gagagcacca
     2041 gcggcaggta gccgaagacc gggcggcgcg cgaaggccgg aagaatcgcc gacaccatgc
     2101 cggcggccgg caggaagatg atgtagacct ccggatgccc gaagaaccag aacaggtgct
     2161 gccacagaag ggcatccccg ccctcggccg gattgaagaa ctgcgtgccg atcaggcggt
     2221 ccatg
//
LOCUS       DATAIQ010000723         3858 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_156010, whole genome shotgun sequence.
ACCESSION   DATAIQ010000723 DATAIQ010000000
VERSION     DATAIQ010000723.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3858)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3858)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3858
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_156010"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            216..2036
                     /locus_tag="VHN20_12005"
     CDS             216..2036
                     /locus_tag="VHN20_12005"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015824557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family protein"
                     /protein_id="HEX2726535.1"
                     /translation="MSSRFQSFDDPADSGQGPGRIAALRAELARRGLAGFIVPRADEH
                     QSEYVPKNAERLAWLTGFTGSAGTAVILLDKAALVVDGRYTLQAAEQVDTAVITPMQM
                     SETPVDAWIEANLPQGAVLGYDPWLHTPGNVKKLQQAAGNAGGTLMALDANPVDAIWA
                     DRPSPPRAPVCPHPSEHAGESSEDKLRRIRDRLRSQRIGALVVSDPHNLAWTFNIRGG
                     DVPHTPLPLGYALIPQDGRATVFLDRAKVTNEAGSAVGAVADIAAPEAMAAALDALGR
                     DKAKVRIDAATGAVALARRVEEAGGVADIGPDPISLMKAAKNPVEIAGARAAHLRDGA
                     AMARFLAWLAQATPGQITEVDAVETLERFRADTGLLRDVSFPTISGAGPNGAIVHYRV
                     TRASNRAIQAGELFLIDSGAQYEDGTTDITRTVAIGAPTAEMRDRFTRVLKGHIAIAR
                     AVFPKGTSGAQIDGLARLALWEAGLDFDHGTGHGVGSYLSVHEGPQRISKIGTTPLEP
                     GMILSNEPGYYKAGAYGVRIENLILVERRQIAGAEREMLGFETLTLAPIDRSLVDQSL
                     LSADEMAWLDAYHARVRQKLSPLVDAGTKTWLEDVTRALR"
     gene            complement(2048..2347)
                     /locus_tag="VHN20_12010"
     CDS             complement(2048..2347)
                     /locus_tag="VHN20_12010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011424770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AzlD domain-containing protein"
                     /protein_id="HEX2726536.1"
                     /translation="MSLDAATLIAIVVMAAITYGTRVAGPLIAQRLVLRGRARAAFEA
                     IPAAVLVAVIAPMALTTGWRETAAAAVTILAATRLPLLPTIAAGVATIVLLRAAT"
     gene            complement(2344..2985)
                     /locus_tag="VHN20_12015"
     CDS             complement(2344..2985)
                     /locus_tag="VHN20_12015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:1902495 - transmembrane transporter
                     complex [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AzlC family ABC transporter permease"
                     /protein_id="HEX2726537.1"
                     /translation="MIAAAPIGLLFGAIATTKGLSPLEATLMSLLVFAGGAQFAGIEL
                     WTYPVPVAALALSTLLVNARHVLMGASLAPKTRRFTRVQRLLGFFFLTDESWALSERR
                     AAERVLTPAYWFASAAVLPLAWVGSTALGAVAGAFLGDPQRYGADFAFTALFIGLIAG
                     FWKGRATGVTIAASAAAAALVHVVFGPPWHVAAGAAAGIAAAYLAASESEAGP"
     gene            complement(3073..>3858)
                     /locus_tag="VHN20_12020"
     CDS             complement(3073..>3858)
                     /locus_tag="VHN20_12020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012592457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HEX2726538.1"
                     /translation="RRRTGGLICPAQAVERLKHFVSRNAFDIEGLGAQRIEEFFEDGL
                     ITRPQDIFTLEARDRRSASKLATREGWGETSAKNLFAAIEARRRVSLDRLIFALGIRH
                     VGETNARLLARHFGAFEQLRATARAAADPESEAYAELTAIGGIGEVVADAIVEFFKER
                     HNEEMLDALLDEVTPEALEEVANESPVAGKTVVFTGSLEQMTRDEAKAMAERLGAKVA
                     GSVSKKTDLVVAGPGAGSKLDKAKQFGVQVVDEDGWFALVGRP"
BASE COUNT          627 a         1381 c         1330 g          520 t
ORIGIN      
        1 aagaacgcgc ccacggcgcg caaggcagtc aggatgatca ttgttattgg tccttaggtc
       61 taggtatctt cgtttgtgat cggaatgtga tggttttcga gcagcttagg tagggggaag
      121 gccgcatgaa agctatgcat ccaacgcggg gcaagttaac aaaagtctaa ataaccagcg
      181 ttaaccgcat ggctggggag gggacagacc atttgatgag cagccgcttt cagtcattcg
      241 acgacccggc cgattcgggt cagggtcccg gacgaatcgc ggcgcttcgc gccgagctgg
      301 cgcggcgcgg gcttgccggc ttcatcgtgc cccgggccga cgagcaccag tccgaatacg
      361 tgccgaaaaa cgccgagcgc ctggcctggc tgaccgggtt cacgggctcc gccggcacgg
      421 cggtgatcct cctcgacaag gccgccctcg tggtggacgg acgctacacc ctgcaggcgg
      481 ccgagcaggt cgacaccgcc gtgatcaccc ccatgcagat gtccgaaacc ccggtggatg
      541 cctggatcga ggccaacctg ccgcaaggcg ccgtgctcgg ctacgatccg tggctgcaca
      601 cgcccggcaa cgtcaagaag ctgcagcagg ccgccggcaa tgccggcggc accctgatgg
      661 ccctggacgc caaccccgtg gacgcgatct gggccgaccg cccctccccg ccccgggcgc
      721 cggtgtgccc ccacccgtcc gagcatgccg gcgaaagcag cgaggacaag ctgcggcgca
      781 tccgcgacag gctcaggagc cagcggatcg gcgccttggt cgtgtccgat ccgcacaacc
      841 tcgcctggac cttcaacatc cgcggcggcg acgtgcccca cacccccctc cccctgggct
      901 atgcgctgat cccgcaggac ggccgggcga ccgtgttcct ggatcgggcc aaggtcacca
      961 acgaggccgg ctcggcggtt ggcgcggtcg ccgacatcgc ggcgccggag gcgatggccg
     1021 ccgccctcga cgcgctcggg cgcgacaagg ccaaggtgcg gatcgacgcc gcgaccggcg
     1081 ccgtcgccct ggcgcggcgc gtcgaggaag ccggcggcgt ggccgatatc ggccccgacc
     1141 cgatcagcct gatgaaggcc gccaagaacc cggtcgagat cgccggcgcg cgcgcggcgc
     1201 atctgcgcga cggcgccgcc atggcgcgct tcctggcctg gctggcccag gccacgccgg
     1261 gacagatcac cgaggtcgac gcggtcgaga cgctcgagcg tttccgggcc gacaccggcc
     1321 tgttgcgcga tgtgtcattc ccgacgatct ccggggccgg cccgaacggg gccatcgtgc
     1381 attaccgcgt gacgcgagcg agcaaccggg ccatccaggc gggcgagctg ttcctgatcg
     1441 attccggcgc ccagtacgag gacggcacga ccgacatcac gcgcaccgta gccatcggcg
     1501 cgccgacggc cgagatgcgc gaccgcttca cgcgcgtgct gaaaggccat atcgccattg
     1561 cccgcgcggt attcccgaaa ggcacctcgg gcgcgcagat cgacgggctc gcgcgcctgg
     1621 cgctgtggga ggcggggctc gatttcgacc acggcaccgg ccacggcgtc ggcagctatc
     1681 tgtcggtgca cgaggggccg cagcgcatct ccaagatcgg caccacgccg ctcgagccgg
     1741 gcatgatcct gtccaacgag ccgggctact acaaggccgg cgcctacggc gtccgcatcg
     1801 agaacctgat cctggtcgag cggcgccaga tcgccggggc cgagcgcgag atgctcggct
     1861 tcgagacgct cacgctcgcc ccgatcgaca ggtcgctcgt cgaccagtcg ctgctgagcg
     1921 ccgacgagat ggcctggctc gacgcctacc atgcgagggt gcgccaaaaa ctgtcgccgc
     1981 tcgtcgatgc cgggacgaag acctggctcg aggacgtgac tcgcgccctc cgataagcat
     2041 cgaacgctca agtcgccgcg cgcagcagca cgatcgtggc gacgccggca gcgatcgtcg
     2101 gcaggagcgg caggcgcgtg gcggcgagga tcgtgacggc cgcggcggca gtctcgcgcc
     2161 agccggtggt gagcgccatg ggggcgatca cggcgaccag cacggccgcg ggaatggcct
     2221 cgaacgccgc ccgggcgcgc ccgcgcagga ccagccgttg cgcgatcaag gggccggcga
     2281 cgcgcgtgcc gtaggtgatg gcagccatca cgacgatggc gatcagcgtc gctgcgtcga
     2341 ggctcacggc cccgcctcgg attcgctggc tgcgagatac gccgccgcga tgccggcggc
     2401 ggcgccggcg gcgacgtgcc agggcggacc gaacacgaca tggaccaagg ccgccgccgc
     2461 ggcgctcgcg gcgatcgtca cgccggtcgc cctgcccttc cagaaaccgg cgatcaggcc
     2521 gatgaacaaa gccgtgaagg cgaagtcggc gccgtagcgt tgcgggtcgc cgagaaacgc
     2581 gccggcgacc gcgccgagcg ccgtcgagcc cacccatgcg agcggcagca ccgccgcgct
     2641 cgcgaaccaa taggccggcg tcagcacccg ctccgccgcc cggcgttccg acaaggccca
     2701 ggattcgtcg gtcaggaaga agaagccgag gagccgctgc acccgggtaa atctgcgcgt
     2761 cttgggcgcc agcgaggcac ccatgaggac gtgccgggcg ttgacgagga gcgtcgacag
     2821 cgcgagcgcg gcgaccggca ccggataggt ccagagctcg atcccggcga actgcgcgcc
     2881 gccggcgaag accagaagcg acatcagcgt cgcctcgagc ggcgacagcc ccttcgtggt
     2941 cgcgatcgcg ccgaacagga ggccgatcgg cgccgccgcg atcatcaccg gcgcgatgtc
     3001 gcgcaggccg tcccgcgcct cggccgacag acgcagccac gatggccggt taagccgcac
     3061 cgccggcgcc cgtcatggcc gcccgacgag cgcgaaccag ccgtcctcgt ccaccacttg
     3121 cacgccgaac tgcttggcct tgtcgagctt cgagccggcg cccggccccg ccacgacgag
     3181 atccgtcttc ttcgacaccg agccggcgac cttggccccg agccgctcgg ccatggcctt
     3241 ggcctcgtcg cgcgtcatct gctcgagcga gccggtgaac acgacggtct tgccggcgac
     3301 cgggctctcg ttcgcgacct cttccagcgc ttccggcgtg acctcatcga ggagcgcgtc
     3361 gagcatctcc tcgttgtgcc gctccttgaa gaactcgacg atggcgtcgg ccacgacctc
     3421 gccgatgccg ccgatcgccg tcagctcggc gtaagcttca gactccggat cggcggcggc
     3481 gcgcgccgtc gcgcgcagct gctcgaacgc gccgaaatgg cgcgcgagca ggcgcgcgtt
     3541 ggtctccccc acatggcgga tgccgagcgc gaagatgagg cggtcgagtg acacgcggcg
     3601 gcgcgcctcg atggccgcaa acagattttt ggcgctcgtc tcgccccagc cttcgcgcgt
     3661 tgcgagcttg ctcgcgctgc gccggtcgcg tgcctcgagc gtgaagatgt cctgcggacg
     3721 cgtgatcagc ccgtcctcga aaaactcctc gatgcgttgc gcgccgaggc cctcgatgtc
     3781 gaaggcgttg cgcgacacga aatgcttgag ccgctccacc gcctgcgccg ggcagatcag
     3841 gccgccggtg cggcgccg
//
LOCUS       DATAIQ010000724         2931 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_37576, whole genome shotgun sequence.
ACCESSION   DATAIQ010000724 DATAIQ010000000
VERSION     DATAIQ010000724.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2931)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2931)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2931
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_37576"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..323
                     /locus_tag="VHN20_12025"
     CDS             <1..323
                     /locus_tag="VHN20_12025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726539.1"
                     /translation="IKMDIEGAEYALLPHLAPLLDRADAILVAFHPTILAAVVNDRRE
                     AARQSRAALSALAGFTAHRVTSDGAGARSFAPALMRWGLSTRLPGDEWLFMRRSGRGG
                     CGAA"
     gene            complement(798..2513)
                     /locus_tag="VHN20_12030"
     CDS             complement(798..2513)
                     /locus_tag="VHN20_12030"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEX2726540.1"
                     /translation="MSGAIARGGAPGWFTRLGQHCYWRDPQAWRLASGLVLFTFVLTH
                     FLNHALGHVSLEAMMDVQAVRRAVWRSWPGTVLLYGAAAVHIGLALWKLVNRRTWRMP
                     AWEAVQIALGLTIPLLLVRHVVGTRGLNSFYGFDDIYTTELRILWPGLAEKQTLLILV
                     VWLHGTIGLHHWLKTKPWYARWRGVLLAIAVLVPTLAITGWIEAGRRVALMHFTEPVF
                     NAAQAAGGAELSDNAETAVWLVFGAAFAVLLLGRFINWLRRGPTITYPGGRRVRGASG
                     ATLLEISRAAGVPHAAVCGGRGRCTTCRVLVSGGVETLPPPNPTEDAALARIHAPPGV
                     RLACQVRPEHSLTVRPLIPLREAQPTLGRDAQRWGVERRITVMFADLRSFTTLAERLY
                     PYDSVFLLNRYFELMSQAIERHGGEVDKFLGDGVMALFGVVPARGAGSRDALYAARDM
                     LRALDRLNEEFEATLAGQLHMGLGVHMGPAVLGRVGGRNAGLTALGDSVNIASRLESL
                     NKQFGSVLVISDAALHASGLVIDGAETHAVSVRGRDETLTVHVVKKLDALSDVERPVT
                     ARSTA"
     gene            complement(2510..>2931)
                     /locus_tag="VHN20_12035"
     CDS             complement(2510..>2931)
                     /locus_tag="VHN20_12035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012336434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0035556 - intracellular signal transduction
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEX2726541.1"
                     /translation="LATFGCARPSDTPAADALRALLALLREAEEFTQAMSRLKGERLE
                     LGFAITGGEVLCGTVGERSRLEFTVIGDTVNLAAKLEKANKTLGTAALADGAVIAAAE
                     REGFTPDRTRAFERFRIELPGVLEPRDVVGWRRVAAA"
BASE COUNT          477 a         1023 c         1016 g          415 t
ORIGIN      
        1 tcatcaagat ggacatcgag ggcgcggaat acgcgctgct tccgcatctc gcgccgctcc
       61 tcgatcgcgc cgacgccatc ctggtggcgt tccacccgac gatcctcgcg gctgttgtga
      121 acgaccgccg cgaggcggcg cgccagtccc gcgccgccct gtccgcgctc gccggcttca
      181 ccgcgcaccg cgtgacgagc gacggcgccg gcgcccgcag cttcgcgccc gcgctcatgc
      241 gctggggtct ctccacgcgc ctgcccggcg acgagtggct gttcatgcgg cgctccggaa
      301 gaggcggttg cggcgcggca tgatggaaac cgcgagccga cccgcagcgc cgttgggcgg
      361 tcttcccgcg ttcgcgaggc gcaagtatgg ccccgtcctg atcatgatgc tgagctcggg
      421 acttgccggt tgtagtcccg gatgcgtgct caggttggcc tacgaatctg acgagttcta
      481 tttggaacaa gcattccagt tggagcttgc gaatgtgcgc cgggcctttc caccgaccga
      541 tgcatatcgt cgatatatgg aacagttcag ctctgccgcg gagctcaagc aagccgaccc
      601 ggcttgctgt tctgtccaga ccgcaaccgc cagtcggacg ggccagtcgc tttggcaact
      661 cgcgaagaat gtcgagatca ggacgccaac acgcgacgcg tactggtcgc tggatggatg
      721 cggaaggcgt ctcaggaggt ccggctacga gtattcaggg cgatgaatcg agcgccacag
      781 ccccgaaaga agcttagtta tgccgtcgaa cgtgccgtga ccggccgctc gacgtcgctg
      841 agcgcgtcga gcttcttgac gacgtgcacg gtcagcgtct cgtcgcgccc ccgaacggag
      901 accgcgtgcg tctcggcgcc gtcgatgacg agccccgatg cgtgcagggc cgcgtccgag
      961 atcacgagca cggagccgaa ttgcttgttg aggctttcca ggcggctggc gatgttgacg
     1021 ctgtcgccga gcgccgtgag cccggcattg cgcccgccga cgcgcccgag cacggccggc
     1081 cccatatgca cgccaaggcc catatgcagc tgtccggcca gcgtcgcctc gaattcctcg
     1141 ttgaggcgat cgagggcgcg cagcatgtcg cgggcggcgt aaagcgcgtc gcggctgccg
     1201 gcgccacgcg ccgggacgac gccgaacaac gccatcacgc cgtcgcccag gaacttgtcg
     1261 acctcgccgc catgccgctc gatcgcttgc gacatcagct cgaaatagcg gttcagcaga
     1321 aaaacggaat cgtaaggata caggcgctcc gcgagcgtgg tgaagctgcg gaggtccgcg
     1381 aacatcacgg tgatgcgtcg ctccacgccc cagcgctgcg cgtcgcgccc gagcgtcggc
     1441 tgcgcctcgc gcagcgggat cagcgggcgc acggtgagcg aatgctcggg cctgacctgg
     1501 caggcgagtc gcacgcccgg cggcgcatgg atgcgcgcca gcgccgcgtc ctcggtgggg
     1561 ttcggcggcg gcagcgtctc gacgccgccg ctcacgagaa cgcggcaggt cgtgcaacgc
     1621 ccgcggccgc cgcacacggc ggcatgcggc acgccggccg cgcggctgat ctcgagcagc
     1681 gtcgcgccgg acgcgccgcg aacgcgccgg ccgccgggat aggtgatggt ggggccgcgc
     1741 cgcagccagt tgatgaaccg gccgagcagg agcaccgcga aggccgcgcc gaacaccagc
     1801 cacaccgccg tctccgcatt atcggaaagc tcggcgcctc cagccgcctg ggccgcgttg
     1861 aacaccggtt ccgtgaagtg catcagcgcg acgcgccgcc cggcttcgat ccacccggtg
     1921 atcgcgagcg tcggcacgag caccgcgatg gcgagaagga cgccgcgcca gcgcgcgtac
     1981 cagggcttgg tcttgagcca gtgatgcagg ccgatcgtgc cgtgaagcca gacgaccagg
     2041 atgagcagcg tctgcttctc ggccaggccg ggccaaagga tgcgcagctc ggtcgtgtag
     2101 atgtcgtcga atccatagaa gctgttgagg ccgcgggtgc cgaccacatg ccgcacgagc
     2161 aggagcggga tggtgaggcc gagggcgatc tgcacggcct cccaggccgg catgcgccac
     2221 gtgcgccggt tcacgagctt ccacaaggcg agcccgatat gcacggcggc ggcgccgtag
     2281 agaaggaccg tgccgggcca ggagcgccac acggcacggc gcaccgcctg cacgtccatc
     2341 atcgcctcaa gcgacacgtg gccgagcgcg tgattgagga aatgcgtcag cacgaaggtg
     2401 aacaggacga ggcccgacgc caggcgccac gcctgcgggt cgcgccagta gcaatgctgc
     2461 cccagacgcg tgaaccatcc gggggcgccg ccgcgcgcga tcgccccgct catgcggcgg
     2521 ccacccgccg ccagccgacc acgtcgcgcg gctccagcac gcccggcagc tcgatccgga
     2581 agcgctcgaa agcgcgcgtg cggtcgggcg tgaagccctc gcgctcggcg gccgcgatca
     2641 cagcgccgtc ggcgagcgcg gccgtgccga gggtcttgtt cgccttctcg agcttcgcgg
     2701 cgaggttcac ggtgtcgccg atcaccgtga attcgagccg cgagcgctcg ccgacggtgc
     2761 cgcacagcac ctcgccgccg gtgatggcga agcccagttc gagacgctcg cctttgaggc
     2821 gcgacatggc ctgcgtaaac tcctcggcct cccgcagcag ggcgagcagc gcccgcaacg
     2881 cgtcggccgc cggcgtgtcg gagggccgcg cgcagccgaa cgtcgccagg a
//
LOCUS       DATAIQ010000725         1565 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_314925, whole genome shotgun sequence.
ACCESSION   DATAIQ010000725 DATAIQ010000000
VERSION     DATAIQ010000725.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1565)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1565)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1565
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_314925"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..660)
                     /locus_tag="VHN20_12040"
     CDS             complement(<1..660)
                     /locus_tag="VHN20_12040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007068082.1"
                     /note="involved in the sodium dependent uptake of proline;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:proline symporter"
                     /protein_id="HEX2726542.1"
                     /translation="MQTGTMIALAIYFIAMLGIGLYAWRKSTEDSEGYLLGGRDLGPA
                     VTALSAGASDMSGWLMLGLPGAIFLSGLGQAWIGIGLVIGAYLNYRLVAPRLRTYTEL
                     AGDAITVPDFFEERFRDRSHALRLVSALVIIVFFALYTSAGMVSGGKFAVSALGMDYL
                     TGVLLMGGVVVAYTALGGFLAVSLTDFVQGCIMFIALVLVPIVAWMELGDGFGPALVA
                     AE"
     gene            746..1507
                     /locus_tag="VHN20_12045"
     CDS             746..1507
                     /locus_tag="VHN20_12045"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018065732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX2726543.1"
                     /translation="MGWADGRHALITGGGSCIGAAAARALAAEGAKVSLTGRRRDPLE
                     AVAAEVGGTAFPADMTDRAATERAFTAARAANGPFDFVILNAGVGDSAPFLRTKREAW
                     DRIIATNLTALFDGAQLVLPNLIDGEDKRLVIIASVAGLRGAAYAAPYVASKHGAVGL
                     TRSLALEYARTGLTVNAVCPAFVDTPMVDDSAARISRTTGRSDDEARAALAAMNANGR
                     LITAEEVADMIVFLCKPSSRSITGAALTIDGGTMA"
BASE COUNT          272 a          576 c          504 g          213 t
ORIGIN      
        1 ctccgccgcg accagcgccg gcccgaagcc gtctcccagc tccatccacg ccacgatcgg
       61 caccagcaca agcgcgatga acatgatgca tccctggacg aagtcggtca ggctgaccgc
      121 gaggaacccg ccgagcgcgg tgtaggcgac gaccaccccg cccatcagca gcacgccggt
      181 cagataatcc atgccgagcg ccgacaccgc gaacttgccg cccgacacca tcccggccga
      241 ggtgtagagc gcgaagaaga cgatgatcac cagggccgag acgagccgca gcgcatggct
      301 cctgtcgcgg aaccgttcct cgaagaaatc gggcaccgtg atcgcgtcgc cggcaagctc
      361 ggtgtaggtc ctcagccgcg gcgcaacgag ccggtagttg aggtaggcgc caatgacgag
      421 gccgatcccg atccaggcct ggccgagccc gctgaggaag atcgcaccag gcaggccgag
      481 catcagccag cccgacatgt cgcttgcccc ggcgctgagc gcggtcaccg ccggcccgag
      541 gtcgcgcccg ccgagcagat agccctcgct gtcctctgtc gacttgcgcc acgcataaag
      601 gccgatgccg agcatggcga tgaaatagat cgccagcgcg atcatcgtcc cggtttgcat
      661 ggcccgacgc tatggccgcc gcagccgcct tgcaagcgcc cttcgccgtg cctagcgttg
      721 gcaagatagc agggagtagc cgaacgtggg ctgggcggac ggacggcacg cactgatcac
      781 cggcggcggc agctgcatcg gcgccgcggc ggcccgggcc ctcgcggcgg agggagccaa
      841 agtctcgctc accggccgcc gccgcgaccc gctcgaagca gttgcggccg aagtcggcgg
      901 cacggccttt cccgccgaca tgaccgaccg cgccgcgacc gagcgggcgt tcaccgcagc
      961 tcgcgcggcc aacggtccat tcgactttgt catcctcaac gccggcgttg gcgacagcgc
     1021 cccgttcctc aggacgaagc gcgaggcgtg ggaccggatc atcgcgacca acctcaccgc
     1081 tctgttcgac ggcgcccagc tcgtcctgcc caatttgatt gacggcgaag acaagcggct
     1141 cgtcatcatt gcctcggtcg ccgggctccg tggcgccgct tatgctgcgc cctacgtcgc
     1201 ctccaagcat ggcgcggtcg gcctgaccag gagcctcgcg ctcgaatatg cccgcaccgg
     1261 cctgaccgtg aacgcggtgt gcccggcgtt cgtcgacacg ccgatggtcg acgacagcgc
     1321 cgcgcgcatt tcccgcacca ccggccgcag cgacgacgag gcccgcgcgg cgctcgcggc
     1381 gatgaacgcc aacgggcgcc tcatcaccgc cgaggaggtc gccgacatga tcgtcttttt
     1441 gtgcaagccg tcgagccgct cgatcacggg cgcggcgctg accatcgacg ggggaaccat
     1501 ggcatgagta tcgacccgca caccctcgag ccgacccatt tccgctgggc cttcgagcgc
     1561 ggcgt
//
LOCUS       DATAIQ010000726         2579 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_130694, whole genome shotgun sequence.
ACCESSION   DATAIQ010000726 DATAIQ010000000
VERSION     DATAIQ010000726.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2579)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2579)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2579
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_130694"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..389
                     /locus_tag="VHN20_12050"
     CDS             <1..389
                     /locus_tag="VHN20_12050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020095362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEX2726544.1"
                     /translation="RTVVAFAGDGDFLMNGQEFATAVQYDLPIVVILLDNGMYGTIRM
                     HQERHYPGRISATALKNPDFSAYARAFGGHGERIARTEQFAPALDRALASHKPAVLHC
                     LIDPEAITPATTLATIREKALAAQRT"
     gene            473..1969
                     /locus_tag="VHN20_12055"
     CDS             473..1969
                     /locus_tag="VHN20_12055"
                     /EC_number="1.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018645753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018478 - malonate-semialdehyde
                     dehydrogenase (acetylating) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-acylating methylmalonate-semialdehyde
                     dehydrogenase"
                     /protein_id="HEX2726545.1"
                     /translation="MRRIGHFIGGRQVDGGSGRFGDVFQPMTGDVIAQLALASKAEVR
                     AAVENAGAAQPAWAATNPQRRARVMMKFLELISREMDSLADLLAREHGKTVADAKGDI
                     QRGVEVVEFACGIPHLMKGEFTEGAGPGIDIYSIRQPLGVVAGITPFNFPAMIPMWKF
                     APAIACGNAFLLKPSERDPGVPMRLAELMIEAGLPPGILNVVNGDKEAVDAILDDPDI
                     KAVGFVGSSMIAEYVYSRATATGKRAHCFGGAKNHMIIMPDADMDQAVDALIGAGYGS
                     AGERCMAVSVAVPVGKGTADALMHKLTPRVESLKVGPSTDPSADFGPLVTRAHLDKVR
                     AYVDLGLREGAKLVVDGRNFHMQGYENGFYMGGCLFDEVQPQMRIYKEEIFGPVLSVV
                     RAKDYGEALRLPSEHEYGNGVAIFTRDGDAARDFAAKVDVGMVGINVPIPVPIAYYTF
                     GGWKRSGFGDLNQHGPDAIRFYTKTKTVTSRWPSGVKEGAEFVIPTMQ"
     gene            2030..2431
                     /locus_tag="VHN20_12060"
     CDS             2030..2431
                     /locus_tag="VHN20_12060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726546.1"
                     /translation="MTKFEPLTRYLNSLSTHERRMSFEEIEKILGFELPPSARKHRPW
                     WSNNPHNSAMTKAWLSAGYRTEQVDMAGETLVFSRRATAADETNDDPRADRSALRGSP
                     FGGLKGTVRIAPDVDLTKPAGEIWDADQGSL"
BASE COUNT          475 a          824 c          832 g          448 t
ORIGIN      
        1 gccggacggt cgtggctttc gcgggagacg gcgatttcct gatgaacggc caggagtttg
       61 ccacggccgt gcaatacgac ctgccgatcg tggtgatcct gctcgacaat ggcatgtacg
      121 gaaccatccg catgcaccag gagcgtcatt atccagggcg catctccgcg accgcgctca
      181 agaaccccga tttttccgct tacgcccgag ctttcggcgg gcatggagaa cgcatcgcgc
      241 ggaccgagca attcgcgccc gcccttgacc gggcactcgc ctcgcacaag cccgccgtcc
      301 tgcattgcct gatcgacccc gaggcgatca cgccggcaac gacgttggcg acgatccgcg
      361 aaaaggcgct cgcggcgcag cgcacctgac gccggcagct tacgagaatg cttcgatttc
      421 gcccgcaccg cgcgtataag agcgctcaac aacacggctg ggagtagctc ggatgcgcag
      481 gatcggtcac tttatcggcg ggcgacaggt cgacggcggc tccggccggt tcggcgacgt
      541 ctttcagccc atgaccggcg acgtgatcgc gcagctggcg ctggcgtcca aggccgaggt
      601 gcgcgccgcc gtcgagaacg ccggcgccgc ccagcccgcg tgggcggcga ccaatccgca
      661 gcgccgtgcc cgggtgatga tgaagttcct ggagttgatc tcccgggaga tggattcgct
      721 cgccgacctg ctggcgcggg agcacggcaa gaccgtcgcc gacgccaagg gcgacatcca
      781 gcgtggcgtc gaagtcgtcg agttcgcctg cggcatcccg catctgatga agggcgagtt
      841 caccgaaggc gccgggccgg gcatcgacat ctactcgatc cgccagccgc tcggggtcgt
      901 cgccggcatc acgccgttca acttccctgc catgattccg atgtggaaat tcgcgccggc
      961 catcgcctgc ggcaatgcct tcctgctgaa gccgtcggag cgcgacccgg gcgtgccgat
     1021 gcggctggcc gaactgatga tcgaggccgg gctgccgccg ggcatcctca acgtcgtcaa
     1081 cggcgacaag gaagccgtcg acgcgatcct cgatgatccg gacatcaagg ccgtgggctt
     1141 cgtgggctcg tcgatgatcg ccgaatacgt ctactcgcgc gccaccgcga ccggaaagcg
     1201 ggcacactgc ttcggcggcg ccaagaacca catgatcatc atgccggacg ccgacatgga
     1261 ccaggcggtc gatgcgctga tcggcgccgg ctacggctcg gcgggcgagc gctgcatggc
     1321 cgtctcggtc gcggtgccgg tgggcaaggg cacggcggat gccctgatgc acaagctcac
     1381 gccgcgggtg gagtcgctca aggtcggccc ctccaccgac ccgtccgccg attttggccc
     1441 gctcgtcacg cgcgcgcatc tcgacaaggt gcgtgcctat gtcgatctcg gcctccggga
     1501 aggggccaag ctcgtcgtcg acggccgcaa cttccacatg caaggttacg agaacggctt
     1561 ttacatgggc ggctgcctgt tcgacgaggt acagccgcag atgcgcatct acaaggaaga
     1621 gattttcggg ccggtcctgt cggtcgtgcg cgccaaggat tatggcgagg ccctgcggct
     1681 gccgtccgag cacgaatacg gcaacggagt cgccatcttc acgcgcgacg gcgacgcggc
     1741 gcgcgacttc gccgccaagg tcgatgtcgg aatggtcggg atcaacgtgc cgatcccggt
     1801 gccgatcgcc tactacactt tcggcggctg gaagcgctcg ggtttcggcg atctcaacca
     1861 gcacggcccc gacgcgatcc gcttctacac caagaccaag acggtcacct cgcgctggcc
     1921 gagcggggtc aaggaagggg cggagttcgt tatccccaca atgcaatagg acgcttgacg
     1981 ccacccctct cgtatatgta taactattat ctacatacgg gaggagtaga tgacgaagtt
     2041 cgagccactc acccggtatc taaattccct gtccactcac gagcgccgga tgagtttcga
     2101 ggagatcgag aagatcttgg gtttcgaact cccgccgtcg gctcgcaagc accggccttg
     2161 gtggtcaaac aatccgcata atagcgcgat gaccaaagca tggctctcgg ccggctaccg
     2221 caccgaacag gtggacatgg cgggtgagac gcttgtcttc agtagacgag caacggccgc
     2281 tgacgaaacg aatgacgatc cgcgggcaga ccgttcggct ttacgtgggt cgccttttgg
     2341 cgggctgaag ggtaccgtca gaatagcgcc ggatgtcgat ctgacaaagc cggccggtga
     2401 gatttgggac gcggatcaag ggtctctttg agtgagggcc ctgctcctcg acacgtgcgc
     2461 ggtgctttgg acggcgaatg gagaacgcat gtccaatgag tctcgtgacg cgatcgaaac
     2521 tgctgagcgc atctttgcgt caccgatctc ggcctgggag attgctaccc tcgttagca
//
LOCUS       DATAIQ010000727         1718 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_201835, whole genome shotgun sequence.
ACCESSION   DATAIQ010000727 DATAIQ010000000
VERSION     DATAIQ010000727.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1718)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1718)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1718
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_201835"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..323
                     /locus_tag="VHN20_12065"
     CDS             <1..323
                     /locus_tag="VHN20_12065"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX2726547.1"
                     /translation="SDWFVAPPSVMEGLYAAVTRITLDDRRPGGWVPEQRIRVEEALR
                     AYTYGPAYASFEEKRKGTLETGKLADFVLLDRGLTKTPAHEIRNAAVRLTVAGGKIVH
                     EAKP"
     gene            320..>1718
                     /locus_tag="VHN20_12070"
     CDS             320..>1718
                     /locus_tag="VHN20_12070"
                     /inference="COORDINATES: protein motif:HMM:NF014354.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="propanediol/glycerol family dehydratase large
                     subunit"
                     /protein_id="HEX2726548.1"
                     /translation="MSESRRFDSRAARDINKDSFIEEWPETGLVVFRSPADPRPQIRV
                     EAGRIVELDERAERDFDLLDRFIALHAIDAGQAPHSMAMPALEIARMLVDIHVPRAEC
                     VRIISGCTPAKLLDIVERLNAVEMMMALQKLRARATPSNQAHVTNRKENPALLAADAA
                     EAVERGFTELETTVGVSRYAPFNALAILIGSQTGRGCALTQCAVEEALSLRLAMLGLT
                     TYAETLSVYGTERAFRDGDDSPWSKTFLAAAYASRGVKVRFTSGTGSEALMGHSEGKS
                     MLYLEARCLLAIKGAGSQGVQNGSISCIALPESLPGGVRGVMAENLMAAMLDLELASG
                     NDAMASHSQIRKASKLMLQFLPGADFIFSGYSSMPREDNLFGGGNFDAEDLDDYNVLQ
                     RDMQVDGGVRPVRNADVLAVRRRAAEAVAAVFDALDLPAVTATEIDAAVAARSSADMP
                     DRDVARDVAAAGAFLT"
BASE COUNT          282 a          618 c          563 g          255 t
ORIGIN      
        1 gcagcgactg gttcgtagcg ccgccctcgg tgatggaagg cctctacgcc gcggtcaccc
       61 gcatcacgct cgacgatcgc cggcccggcg gctgggtacc ggagcagcgt atacgcgtcg
      121 aagaggcgct gcgcgcctac acgtacggcc ccgcgtacgc ctcgttcgag gagaagcgca
      181 agggcacgct cgagactggc aagctcgccg acttcgtcct cctcgaccgc ggcctcacca
      241 agacgcccgc gcacgagatc cgcaatgccg ccgtccggct caccgtcgca ggcggcaaga
      301 tcgtccatga ggccaagcca tgagcgaatc gagacggttc gacagccgtg ccgcccgcga
      361 catcaataag gacagcttca tcgaggagtg gccggagacc ggactcgtcg tgttccgtag
      421 tcccgcagac ccgcggccgc agatccgcgt cgaagccgga cgcatcgtcg agctggacga
      481 gcgggcggag cgcgacttcg acctgctcga ccgcttcatc gcgctgcacg cgatcgatgc
      541 cgggcaggcg ccgcattcga tggcgatgcc cgcgctcgag atcgcgcgca tgctggtcga
      601 catccacgtg ccgcgcgccg agtgcgtgcg catcatcagc ggctgcacgc cggcgaagct
      661 gctcgacatc gtcgagcgcc tcaacgcggt cgagatgatg atggcgttac agaagctgcg
      721 cgctcgtgcc acgccatcga accaggcgca cgtcaccaac cgcaaagaga acccggcact
      781 gctcgccgcc gatgcggccg aggccgtcga gcgcggcttc accgaactcg agaccaccgt
      841 cggcgtctcg cgctacgcgc ccttcaacgc gctcgccatc ctcatcggat cgcagaccgg
      901 acgcggctgc gcgctgacgc agtgcgcggt cgaggaggcg ctgagcctgc gtctcgcgat
      961 gctcggcctc accacctacg ccgagacgct gtcggtctat ggcaccgagc gcgccttccg
     1021 cgacggcgac gactcgccgt ggtcgaagac gttcctcgcg gcagcctacg cgtcgcgcgg
     1081 cgtgaaggtc cggttcacct cgggcacagg ctcggaggcg ctcatgggcc actcggaagg
     1141 caagtcgatg ctctatctcg aagcccgctg cctgctcgcc atcaagggcg ccggctcgca
     1201 gggcgtccag aacggatcca tcagttgcat cgcgctgcct gagtcgctgc ccggcggcgt
     1261 acgcggcgtg atggccgaga atctcatggc cgcgatgctc gacctcgagc ttgcttcggg
     1321 caacgatgcg atggcgtcgc actcgcagat ccgcaaagcc tcgaagctga tgctccagtt
     1381 cctgccgggc gccgacttca tcttctccgg ctacagcagc atgccgcgcg aggacaacct
     1441 gttcggcggc ggcaacttcg acgccgagga cctcgacgac tacaacgtcc ttcaacgcga
     1501 catgcaggtc gacggcggcg ttcgtcccgt gcgtaacgcc gatgtgctgg cagtgcggcg
     1561 gcgcgctgcc gaagccgtgg ccgcggtgtt cgacgcgctc gacctcccgg cggtcacggc
     1621 gacggagatt gacgccgcgg tcgccgcccg ctcgagcgcc gacatgccgg accgagacgt
     1681 agcgcgcgac gtcgccgcgg ccggcgcctt cctcactc
//
LOCUS       DATAIQ010000728         3510 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_201858, whole genome shotgun sequence.
ACCESSION   DATAIQ010000728 DATAIQ010000000
VERSION     DATAIQ010000728.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3510)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3510)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3510
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_201858"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..207)
                     /locus_tag="VHN20_12075"
     CDS             complement(<1..207)
                     /locus_tag="VHN20_12075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726549.1"
                     /translation="MSGGRRFGVTGDVNNPGRFQEDVDKELSKVGRELGSVEGRTTAL
                     EGGKLDASAVSAFMLTLLDEASAAA"
     gene            complement(253..894)
                     /locus_tag="VHN20_12080"
     CDS             complement(253..894)
                     /locus_tag="VHN20_12080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726550.1"
                     /translation="MAIANYTDLQGAVADWLARSDLAARIPDFIVMAEGRFNRKLRAR
                     EMEASSAIPLTAGAGVLPADYLEWISGTWVGARTQDLRFVEADSEDWRRRFRPNGDPQ
                     VFTVLAGSVRVRPVPSGVNTVTLFYYQKIPPLVTSATNWLMSKYPDLYIYTTCAEALM
                     FVKDDERLARAVSLIEPAMQTVLFDADSGKQGRRPGKEAEVADQQRAVTSLGL"
     gene            complement(978..1583)
                     /locus_tag="VHN20_12085"
     CDS             complement(978..1583)
                     /locus_tag="VHN20_12085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726551.1"
                     /translation="MPLSTSSDLQAAVADWLARADLGASIPDFVRLAEARLNLLLRCR
                     EMTASATLAPAAGICVLPADFVEALAAVANAGPSAVLEAVPLSWGDAQFPTYPTGTPR
                     YYALYGASLKTYPQSSATVTLTYLQALPPLAANASNWLLAKAPGAYLYGALLEAAPFL
                     DDDPRVALWAQMWQRIVGELNAADQRAVLGRNSARATGLMP"
     gene            1922..>3510
                     /locus_tag="VHN20_12090"
     CDS             1922..>3510
                     /locus_tag="VHN20_12090"
                     /inference="COORDINATES: protein motif:HMM:NF020137.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005615 - extracellular space [Evidence
                     IEA];
                     GO_function: GO:0005509 - calcium ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M10 family metallopeptidase C-terminal
                     domain-containing protein"
                     /protein_id="HEX2726552.1"
                     /translation="MPITSLLTVDKVISLDLISLWPLDPPTGTTQPMTGDANIDGILS
                     GYKWSHGHIKFNFPTSAGYYPAGYSDDNEPANNFHAATAGQQDAVRWALHEQYAKVAN
                     LFFTEAGPGAAATISVAQSDDPSTAWGYYPSSSQSGGDVWFRYSGGTYASPQLGNYAW
                     HATLHELGHALGLKHGHDTTNANALLMPAARDSMEFSVMSYRSYIGDTSSGYDNETWG
                     YAQSLMMYDIAAIQKMYGADFSTNATDTVYTFGTTTGEMFVNGVGQGAPGGNRIFRTI
                     WDGNGNDTYDFSNYATNLTVDLQPGKWSMLSATQRANLGDGHFARGNVFNALLHEGDL
                     RSLIENARGGSGDDNITGNQANNWLVGNNGDDVLVGLDGNDTLTGGAGRDSLFGGNGA
                     DWLVGGADNDWLVGGNDNDTLFGQTGNDTMNGNAGNDLMFGGSGIDYMTGGIGDDRML
                     GEAGNDTLRGDAGADVLTGGLNADKLYGGANNDQFVFAPGDGLDTIYDFTAGGTDDWI
                     KLNTTALDTWAEIRAATVDVGA"
BASE COUNT          579 a         1253 c         1179 g          499 t
ORIGIN      
        1 cgcggcggcg ctggcctcgt cgagcaatgt cagcatgaag gccgagacgg cgctcgcatc
       61 gagcttgccg ccctcgagcg ccgtcgtgcg gccctcgacg ctgccgagct cgcgccccac
      121 cttgctcagc tccttgtcga cgtcttcctg gaagcgcccc gggttgttga cgtccccggt
      181 gacgccgaag cgccggccgc ccgacatcgc gtcatctcct ggtcaggggt gccgcaggcg
      241 cgtcacgaac catcacagcc cgaggctggt gaccgcgcgc tgctggtcgg cgacctccgc
      301 ctccttgccg ggccgccggc cctgcttgcc ggaatcggcg tcgaacagca cggtctgcat
      361 ggccggctcg atcagcgaca cggcgcgggc gagccgctcg tcgtccttca cgaacatcag
      421 cgcctcggcg caggtcgtgt agatgtagag gtccgggtat ttgctcatca gccagttggt
      481 ggcgctggtc acgagcggcg ggatcttctg gtagtagaac agcgtgaccg tgttgacgcc
      541 gctcggcacc ggccgcacgc gcaccgagcc ggccaggacg gtgaacacct gcggatcgcc
      601 attcggccgg aagcgccgcc gccagtcctc ggaatcggct tcgacgaagc gcagatcctg
      661 cgtgcgggcg ccgacccacg tgcccgagat ccactcgaga tagtcggccg gcagcacgcc
      721 ggcgcccgcg gtcagcggga tcgcgctcga cgcctccatc tcgcgcgcgc gcagcttgcg
      781 attgaagcgc ccctccgcca tcacgatgaa gtcggggatg cgcgcggcga gatcggagcg
      841 cgccagccag tcggcgacgg cgccctgcag gtcggtgtag ttggcgatgg ccatgtcagt
      901 ccccagtgat cagtcatcag tgatcagaat ccgccgcggt cccatctgat cactgatcac
      961 cgatcactga tcaccggtta cggcatgagc cccgtcgcgc gggcgctgtt gcggccgagg
     1021 acggcgcgct ggtcggcggc gttgagctcg ccgacgatgc gctgccacat ctgcgcccag
     1081 agcgcgacgc gcgggtcgtc gtcgaggaac ggcgccgcct cgagcagcgc gccgtaaagg
     1141 taggcgccgg gcgccttggc gagcagccag ttgctggcgt tggccgcgag cggcggcagc
     1201 gcctgcaggt aggtgagcgt caccgtcgcg ctcgattgcg gataggtctt caggctggcg
     1261 ccgtagagcg cgtagtagcg cggcgtcccg gtcgggtacg tcgggaactg cgcgtcgccc
     1321 cagctcaacg gcaccgcctc gagcaccgcg ctcgggcccg cattggccac ggccgcgagc
     1381 gcctcgacga aatcggccgg cagcacgcag atgccggccg ccggcgcgag cgtcgcgctc
     1441 gccgtcatct cgcggcagcg caggaggagg ttgaggcgtg cttccgccag cctgacgaag
     1501 tcggggatgc tcgcgccgag gtcggcgcgc gcgagccagt cggcgaccgc ggcctgcagg
     1561 tcgctggagg tggagagcgg catgtcgggg tgtccggtcg cggcgcggcg gcgcgccgtg
     1621 cagaagacgg gtcgttgctg cggcggctcc gcgcatggcc ggggcgcgag ccgcgcggac
     1681 cttgtcagga aagttacgcc cggcgcccgc ggcgcgatca atgggccgct ccgtgcccga
     1741 tcgtctcgcg cgcggcggat catgcgcctg gcgcggccag gcgcagcagc cgcgccgctc
     1801 ggcacgcgcc ggcaacgtgc gcggcggcac cgtatcgcgg cgccgtgtcc ggcatcatga
     1861 gcgtcaacaa aggcggccct ggtgccgcaa tcatcacatc gcggggaatt ggagaggtgg
     1921 tatgccgatc acatcgctat tgaccgtcga taaagttatc agtctcgatc tgatctcgct
     1981 ttggccgctg gatccgccta ccggcaccac gcagccgatg accggcgacg ccaacatcga
     2041 cggcatcctg agcggctaca agtggagcca cggccacatc aagttcaact tcccgacctc
     2101 ggcgggctac tacccggccg gctattcgga cgacaacgag ccggccaaca acttccacgc
     2161 cgccacggcc ggccagcagg acgcggtgcg ctgggcgctc catgagcaat acgccaaggt
     2221 ggcgaacctg tttttcaccg aggccgggcc gggcgccgcc gcgacgatca gcgtcgcgca
     2281 gagtgacgac ccgagtacgg cgtggggcta ttacccgtcg tccagccaat ccggcggcga
     2341 cgtgtggttc cgctactcgg gcggcacata cgcgtcgcct cagctcggca actatgcctg
     2401 gcacgccacg ctgcacgagc tcggccacgc gctcgggctc aagcatggcc acgacaccac
     2461 caacgccaac gcgctcctga tgccggcagc ccgcgacagc atggaattca gcgtcatgag
     2521 ctaccgctcc tacatcggcg acacgtcgag cggctacgac aacgagacgt ggggctatgc
     2581 gcagtccctg atgatgtacg acatcgccgc catccagaag atgtacggcg ccgacttctc
     2641 gaccaacgcg accgacaccg tctacacgtt cggcacgacg accggcgaga tgttcgtcaa
     2701 cggcgtcggc cagggcgcgc ccggcggcaa ccgcatcttc cgcaccatct gggacggcaa
     2761 cggcaacgac acctacgatt tctccaatta cgccaccaac ctcaccgtcg acctgcagcc
     2821 gggcaagtgg tcgatgctgt cggcgacgca gcgcgccaat ctcggcgacg ggcatttcgc
     2881 gcgcggcaac gtgttcaacg ccctgctgca cgagggcgac ctgcgctcgc tcatcgagaa
     2941 cgcccgcggc ggctccggcg acgacaacat caccggcaac caggccaaca actggctggt
     3001 cggcaacaac ggcgacgacg tcctcgtcgg cctcgacggc aacgacaccc tcaccggcgg
     3061 cgccggccgc gactcgctgt tcggcggcaa cggcgccgac tggctggtcg gcggcgccga
     3121 caacgactgg ctcgtcggcg gcaacgacaa cgacacgctg ttcggccaga ccggcaacga
     3181 caccatgaac ggcaatgccg gcaacgatct catgttcggc ggctccggca tcgactacat
     3241 gaccggcggc atcggcgacg accgcatgct cggcgaggcc ggcaacgaca ccttgcgcgg
     3301 cgacgccggc gccgacgtcc tcaccggcgg gctcaacgcc gacaagctct acggcggcgc
     3361 caacaacgac cagttcgtgt tcgccccggg cgacggcctc gacacgatct acgatttcac
     3421 cgccggcggc accgacgact ggatcaagct caacaccacc gcgctcgaca cgtgggccga
     3481 gatccgcgcc gcgacggtcg acgtcggcgc
//
LOCUS       DATAIQ010000729         1890 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_407513, whole genome shotgun sequence.
ACCESSION   DATAIQ010000729 DATAIQ010000000
VERSION     DATAIQ010000729.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1890)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1890)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1890
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_407513"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(176..976)
                     /locus_tag="VHN20_12095"
     CDS             complement(176..976)
                     /locus_tag="VHN20_12095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0001510 - RNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HEX2726553.1"
                     /translation="MTERSSRPERRKAARPHRPARNAHPRHAHDDDVAVIYGWHPVVE
                     ALRNDRRQVRRLLVTENAERRLHETVPALPVQPQLVRPDEISRLLEPDAVHQGLYLEA
                     DPLPSPTLDSLPDDAFVLALDQITDPHNVGALVRTAAAFKVDAILTTARHSPSATGVL
                     AKSASGGLEHVPFLIVRNLAEALIALGERGFQRVGLDSEGDRPLDGITVRRPMVVALG
                     AEGKGLRQRTRECCDVIGRLDMPGAIKSLNVSNAAAITLYALTRPPLP"
     gene            1150..1235
                     /locus_tag="VHN20_12100"
     tRNA            1150..1235
                     /locus_tag="VHN20_12100"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1184..1186,aa:Tyr,seq:gta)
     gene            1304..1377
                     /locus_tag="VHN20_12105"
     tRNA            1304..1377
                     /locus_tag="VHN20_12105"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1336..1338,aa:Gly,seq:tcc)
     gene            complement(1482..>1890)
                     /locus_tag="VHN20_12110"
     CDS             complement(1482..>1890)
                     /locus_tag="VHN20_12110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726554.1"
                     /translation="ESLSVNRRHRLLRRGRTYGPRLYDLDVDAILERGDDGVERGLHF
                     ICLNSNIARQFEFVQVSWCNNPQFRALVDDVDPLIGARGRFTGGGGATFTIPHEVGRT
                     RLHGLPDFVTVRGGAYFFMPGLSALRYLADAHP"
BASE COUNT          298 a          580 c          705 g          307 t
ORIGIN      
        1 gggcgccagg atcctcacgg tcgatcccag cgacgcgccc agcgtgccgg cggaggtctc
       61 gtccggcggc ccgcgcatca tctatctcga cgtgccggtc ggccgctgac cgcctcccgg
      121 gggaggtcgc cactctcacc cggtccgctc tgctttgtgg aatcggcctc tcccgtcagg
      181 ggaggggcgg tctcgtcagc gcgtagagcg tgattgcggc tgcgttggag acgttgaggc
      241 tcttgatggc gcccggcatg tcgagacggc cgatcacgtc gcagcactcg cgcgtgcgct
      301 gacgcaggcc tttgccttcg gcgccgagcg ccacgaccat ggggcggcgc accgtgatcc
      361 cgtcgagcgg acggtcgcct tccgaatcga gcccgacgcg ctgaaagccg cgctcgccga
      421 gggcgataag cgcctcggcg aggttgcgca cgatcaggaa cggcacgtgc tcgaggccgc
      481 cggaagccga cttggcgagg acgccggtcg ccgaggggct gtggcgcgcg gtcgtgagaa
      541 tcgcgtcgac cttgaaggcc gcggccgtgc gcacaagggc gccgacgttg tgcgggtcgg
      601 tgatctggtc aagggcgagc acgaaggcgt cgtccggtag gctgtccagg gtcggggagg
      661 gcaggggatc ggcttccagg taaagcccct ggtggaccgc gtcgggttcg agcaggcggc
      721 tgatctcatc gggccgcacc agctgcggct ggaccggaag cgcgggaacc gtctcgtgca
      781 ggcggcgctc ggcgttctcg gtgacgagca ggcggcgcac ctggcggcgg tcgttgcgca
      841 gggcctcgac gacaggatgc cagccgtaga tcacggcgac gtcgtcgtcg tgcgcatgcc
      901 ggggatgcgc gttgcgggcg gggcgatgcg gccgcgccgc ctttcgccgc tcgggtctcg
      961 aagaacgctc ggtcatgatc ggtcactgta aagggctgcc acggcccacc atatggggcg
     1021 agacgcagcg cgccggggtt ttgggttgac accgggagag ggcgttacca taagagcgcc
     1081 cgaaattccc gcctcgcgcg ggtgttttgc gtttcatggc ctggcgtgct tgcgaggcct
     1141 ggttgagacg ggggaatgtc ccgagcggca aagggggcgg actgtaaatc cgctggctta
     1201 cgccttcgta ggttcgagtc ctacttcccc caccaatcag gtatcagtga tcagaaggga
     1261 ttcggcctct ctgataaccg atgactgatc actggtcact gatgcgggtg tagctcaatg
     1321 gtagagcaac agccttccaa gctgatgacg agggttcgat tcccttcacc cgctccagcc
     1381 gtccaattgt ccgacccgga cacatgggcg acagatcgtt cctgagacat aggtaacaac
     1441 ctcgggcgag ccggccgcca tgggcaatgg cgccgtgctc ctcacgggtg cgcgtcggcg
     1501 aggtagcgca gcgccgacag gccgggcatg aagaaatagg cgccgccgcg gacggtgacg
     1561 aagtcgggga ggccgtgcag acgggtgcgc ccgacctcgt gcggaatcgt gaaggtggcg
     1621 ccgccgccgc cggtgaagcg gccgcgggcg ccgatcagcg gatcgacgtc gtcgacgagc
     1681 gcgcggaact gcgggttgtt gcaccagctc acctgcacga actcgaactg gcgggcgatg
     1741 ttggaattga ggcagatgaa gtggaggccg cgctcgacgc cgtcgtcgcc tctctcgagg
     1801 atggcgtcga cgtcgagatc gtagaggcgc gggccgtaag tgcggccgcg gcgcagcagc
     1861 cggtgccggc ggttgaccga gagggattcg
//
LOCUS       DATAIQ010000730         2930 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_37820, whole genome shotgun sequence.
ACCESSION   DATAIQ010000730 DATAIQ010000000
VERSION     DATAIQ010000730.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2930)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2930)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2930
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_37820"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1349
                     /locus_tag="VHN20_12115"
     CDS             <1..1349
                     /locus_tag="VHN20_12115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008968821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HEX2726555.1"
                     /translation="FGCVVFTTLAVAAAAHWLLGMPLAVAFVLGAIVAPPDVVAPLAI
                     ARRLGLPRRLVVVLEGEGLANDATALILYRFAVAAVSTGLFSLGEAAGTFALIVVGEI
                     GYGIALGWLSLRLRRWVRDPRIELTLSLMTPYVAFWAPEHLGGSGVLATISAGLFVSW
                     NGPLLIPAATRLQGIFFWDLVIYFLEGFVFLITGLQARTLLERLGTVALRDLVFAVLL
                     TTVVVIVARFVWVFPAVYLPRWLSRSLARRDPAPPWQWAFLLSFVGVRGVVSLAAALA
                     IPLATAGGAPFPQRDMILAVTFGVIVITLVGQGLLLPGVVKRLGFTRHSADERRSEHE
                     AELAARAEALATAQKRLEELADGGGMAPDVLAALRLRHDYRAARLPHRVGDQADAAAA
                     AADIRTKLIEIERAYIYRLLQDGRITDEARRRIERELDLEEAGIACKKEGGVEPPL"
     gene            1378..2754
                     /locus_tag="VHN20_12120"
     CDS             1378..2754
                     /locus_tag="VHN20_12120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008122573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-containing oxidoreductase"
                     /protein_id="HEX2726556.1"
                     /translation="MGRSFDAIIIGAGQAGPSLAGRLSAAGMTVAIAERQLVGGTCVN
                     TGCMPTKTMVASAYAAHLARRGADYGVAVGEVAVDMRRVHERAAKVTRDARSGLEGWL
                     SNMERCTLVRGHARFAGPHEIEIEGETLTAPKIFINVGGRAAVPDMPGIGSIKYLTNT
                     GMVALDAVPEHLIVVGGSYIGLEFGQMFRRFGAKVTIVEMAPRLVSREDPDISAAIRD
                     ILEREGVEVRADAKCIGFEARGDRVKLNVDCASDDREVLGSHVLLAVGRRPNTDDLGL
                     AHAGIEVDGRGFIKVDETLATTAEGVWALGECNGRGAFTHTAYNDFEIVAANLLDGDG
                     RRVGDRVSGYALYIDPPLGRVGQSEAEAKKSGREVLVGSRPMTRVGRAVEKGETQGFM
                     KIVADPDSGRILGAAILGTGGDEAIHGILDAINAGMTWKQLQWAVPIHPTVSELIPTV
                     LGEMKPSH"
BASE COUNT          413 a         1010 c         1047 g          460 t
ORIGIN      
        1 ccttcggctg cgtcgtgttc acgacccttg ccgtcgcggc ggccgcccac tggctgctcg
       61 gcatgccgct cgcggtcgca ttcgtgctcg gcgccatcgt ggcgccgccc gacgtggtgg
      121 cgccgttggc gatcgcccgc cggctcgggc tgccgcgccg gcttgtcgtc gtgctcgaag
      181 gggaggggct cgccaacgac gccaccgccc tgatcctcta ccgcttcgcc gtcgcggccg
      241 tcagcaccgg cctgttctcg ctcggcgagg cggccgggac cttcgcgctg atcgtcgtcg
      301 gcgagatcgg ctacggcatc gccctcggct ggctcagcct gcgcctgcgc cgctgggtgc
      361 gtgacccgcg catcgagctg acgctgtcgc tgatgacgcc ttacgtggcg ttctgggcgc
      421 ccgagcatct cggcgggtcg ggcgtgctgg cgacgatctc ggccggtctg ttcgtcagct
      481 ggaacgggcc gctgctgatc ccggcggcga cgcggctgca gggcatcttc ttctgggacc
      541 tggtgatcta ttttctcgaa ggcttcgtgt tcctgatcac cggcctgcag gcgcgcacgc
      601 tgctcgagcg cctgggaacg gtcgccttgc gcgacctcgt tttcgcggtg ctgctcacga
      661 ccgtggtggt gatcgtggcg cgcttcgtct gggtgttccc cgccgtctac ctgccgcgct
      721 ggctgagccg gtcgctcgcg cgccgcgatc cggcgccgcc gtggcaatgg gcgttcctcc
      781 tgtccttcgt cggcgtgcgc ggcgtcgtct ccctcgcggc ggcgctcgcc atcccgctcg
      841 ccacggccgg cggcgcgccg ttcccgcagc gcgacatgat cctcgccgtc acgttcggcg
      901 tcatcgtcat cacgctggtc gggcagggac tgctgctccc gggcgtcgtg aagcggcttg
      961 gtttcacacg ccacagcgcc gacgaacgcc gcagcgagca cgaggccgag ctcgccgcgc
     1021 gcgcggaggc gctggcaacg gcgcagaagc ggctcgagga gctcgccgac ggcggcggca
     1081 tggcccccga cgtgctcgcg gctttgcgtc tgcggcatga ttaccgggcg gcgcggctgc
     1141 cgcatcgcgt gggcgatcag gcggacgcgg cggcggccgc ggccgacatc aggaccaagc
     1201 tgatcgagat cgaacgcgcc tacatctacc ggctgctgca ggacggccgc atcaccgacg
     1261 aggcgcgccg gcgcattgag cgcgagctcg acctcgagga agccggcatc gcctgcaaga
     1321 aggagggcgg ggtcgagccg cccttgtaat gctccgtacg atcaccggga ggcgcgcatg
     1381 ggcaggagtt tcgacgccat catcatcggg gccgggcagg cggggccgtc cctcgccggg
     1441 cggctgagcg cggccggcat gaccgtggcg atcgccgagc gccagctggt cggcggcacc
     1501 tgcgtcaaca cgggctgcat gccgaccaag acgatggtgg cgagcgccta tgccgcgcat
     1561 cttgcccggc gcggcgccga ttacggcgtc gccgtgggcg aggtcgcggt cgacatgagg
     1621 cgggtgcacg aacgcgctgc taaggtgacg cgggacgcgc gctccggcct cgaaggctgg
     1681 ctgtcgaaca tggagcgctg cacgctggtc cgcggccacg cacgcttcgc cgggccgcac
     1741 gagatcgaga tcgagggcga gacgctcacg gccccgaaga tcttcatcaa tgtgggcggc
     1801 cgcgccgcgg tgcccgacat gcccggcatc ggcagcatca aatatctcac caacacgggc
     1861 atggtggccc tcgacgcggt gcccgagcat ctcatcgtcg tcggcggcag ctatatcggg
     1921 ctcgaattcg gacagatgtt ccgccgcttc ggcgccaagg tcacgatcgt cgagatggcg
     1981 ccgcgcctcg tgtcgcgcga ggatccggat atttcggcgg cgatccggga catcctcgag
     2041 cgggaaggcg tcgaggttcg cgccgacgcc aagtgcatcg gcttcgaggc tcggggcgac
     2101 cgcgtcaagc tgaacgtcga ctgcgcctcc gacgaccgcg aggtcctcgg ctcgcacgtc
     2161 ctcctggcgg tcgggcgccg cccgaacacc gacgatctcg gccttgcgca tgccggcatc
     2221 gaggtcgacg ggcgcggctt catcaaggtc gacgagacgc tcgccaccac tgcggagggc
     2281 gtctgggcgc tcggcgagtg caacggccgc ggcgccttca cgcacacggc ctacaacgat
     2341 ttcgagatcg tcgccgccaa cctgctcgac ggcgacggcc gccgcgtcgg cgaccgcgtg
     2401 tccggatacg cgctgtatat cgacccgccg ctgggccgcg tcggccagtc ggaagccgag
     2461 gcgaagaagt caggccgcga ggtgctggtc ggcagccggc cgatgacgcg cgtcggccgc
     2521 gccgtcgaga agggcgagac gcagggtttc atgaagatcg tcgccgaccc ggacagcggc
     2581 cgcatcctcg gcgcggcgat cctcggcacc ggcggcgacg aggcgatcca cggcatcctc
     2641 gacgccatca acgcgggcat gacctggaag caattgcaat gggcggtgcc gattcatccg
     2701 accgtgtcgg agctcatccc gaccgtcctc ggcgagatga aaccatcgca ttgaggccgg
     2761 acggtgagcg tcgcgatttg cgagagcacc gaagcggtga tcacgccttt gcgtccttga
     2821 aacgatcgca cggccattgc cgaaacgaga aaacgggagc acgctagggt cgagaagcgt
     2881 ccgaattacc cgtgccgggt tcaggaggac gggaagacga gttcggacgg
//
LOCUS       DATAIQ010000731         6042 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_130875, whole genome shotgun sequence.
ACCESSION   DATAIQ010000731 DATAIQ010000000
VERSION     DATAIQ010000731.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 6042)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6042)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6042
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_130875"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..710
                     /locus_tag="VHN20_12125"
     CDS             <1..710
                     /locus_tag="VHN20_12125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015663466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ammonia channel protein"
                     /protein_id="HEX2726557.1"
                     /translation="GKRIGYGRDLLAPHSLTMTMVGASLLWVGWFGFNAGSNLEANGV
                     TALAMINTFVATAAAALSWLFVEWAVKGKPSLLGMASGAIAGLVAVTPASGFSGPMGA
                     IVLGLVAGAVCFVFCSSVKNALGYDDSLDVFGIHCIGGILGALATGILVNPALGGAGI
                     PDYVTKPGELALADYDFATAVWAQAKAVLLTLAWSGIGSAILYKVVDLIVGLRVTPDE
                     EREGLDLADHGERAYNY"
     gene            complement(864..1172)
                     /locus_tag="VHN20_12130"
     CDS             complement(864..1172)
                     /locus_tag="VHN20_12130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726558.1"
                     /translation="MFKDSTLKATLISGAMAIVALGSTVSPSQAENGRNAAAIAGAVG
                     GFAAGAAVGSAGAHDPYYTGSVRQRRVIVEDDGEDCVIRTKRVYVNGVMQVRRQEVCR
                     "
     gene            complement(1443..2477)
                     /locus_tag="VHN20_12135"
     CDS             complement(1443..2477)
                     /locus_tag="VHN20_12135"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009338437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004073 - aspartate-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HEX2726559.1"
                     /translation="MGYKVAVVGATGNVGREMLEILAERAFPADEVVALASRRSQGTE
                     VSFGDKTLKVKTLDTYDFSDVDICLMSAGGTVSKEWSPRIGAQGAVVIDNSSAWRYDE
                     DVPLVVPEVNGDAVRGYTKKNIIANPNCSTAQLVVALKPLHDHARITRVVVATYQSVS
                     GAGKEAMDELFDQTRAVFTAGEVRTQKFPKRIAFNLIPHIDVFMEDGYTKEEWKMMVE
                     TKKILDPKIKLTATCVRVPVFISHSEAVNVEFEKPITADEARDVLRQAPGIVVLDKRE
                     PGGYITPHEAAGEDPTYISRLREDFTVENGLSFWCVSDNLRKGAALNAIQIAEALINR
                     GLLTAKKKAA"
     gene            2689..3345
                     /locus_tag="VHN20_12140"
     CDS             2689..3345
                     /locus_tag="VHN20_12140"
                     /inference="COORDINATES: protein motif:HMM:NF012976.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protocatechuate 3,4-dioxygenase"
                     /protein_id="HEX2726560.1"
                     /translation="MRLVATPQLGRRRFMTGGLAATGTLILNAGGAAQGRLVATPAQT
                     AGPFYPVSFPADTDNDLVLLLGSAARAEGIVTHVMGRVLDADGKPVAGATVEIWQCDA
                     HGRYLHPGDTGRRPRDSAFQGYGRIASAADGAYRFRTIRPVPYPGRTPHIHFAVTAPD
                     RRQFVTQMYVAGEPLNERDALYRSIRDARQRKAVTVRLETANGVEPDALAGTFDIVLA
                     "
     gene            complement(3432..3647)
                     /locus_tag="VHN20_12145"
     CDS             complement(3432..3647)
                     /locus_tag="VHN20_12145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726561.1"
                     /translation="MAATPPEMGGRLTRLDADRKTLWLRGNRGWHAGLELGTGREKPR
                     GDLRVIARIRRFGSSDPSSAAAIPPAV"
     gene            3687..4457
                     /locus_tag="VHN20_12150"
     CDS             3687..4457
                     /locus_tag="VHN20_12150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726562.1"
                     /translation="MMAVVAYVAHQGEAKQDTAVRPRPQRLAATVPPPAWQPIGNPSA
                     IYAVDAPALVNLPFALEARRHASGAREDALTYGAFDTGAEPHVRLVVQDGNGAQGPHS
                     FFVDVARGAADAGLAVMRSAQPVALPTKFGTAEAAEVVLSAASDRTCQALRLAHADAE
                     FHVVAWSCGAPGRAVTQRELACLVDRLALTPAAADDAELKAMFARAETQRHAACAPTP
                     VARVRKAAAPTRAPKRVHKPARAAEPRATVRRLLKALR"
     gene            4591..4890
                     /locus_tag="VHN20_12155"
     CDS             4591..4890
                     /locus_tag="VHN20_12155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726563.1"
                     /translation="MAAAPAAEAQQQIRYRQDGRVLILNVKPRSYLDAGNVVPVGSEH
                     RVGTAFSESVSYLNMPPWHHQRDRFGAGTLPDPVTNGPFVGAQNPFGPIDWVAPR"
     gene            complement(5081..5503)
                     /locus_tag="VHN20_12160"
     CDS             complement(5081..5503)
                     /locus_tag="VHN20_12160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726564.1"
                     /translation="MRTAQLIVHLLGLGIATAAFPCWAWWGFGAVMGANHRLRNADPR
                     TSGRLVAAVTFAVVGVLAAPLVTAVVIVPPLSFASRPAVQALLSFTIAIILLVTLTRL
                     LYRRTSSRPDKPRVCTLPGAVGAYVLASVLLGYGATLS"
     gene            complement(5514..>6042)
                     /locus_tag="VHN20_12165"
     CDS             complement(5514..>6042)
                     /locus_tag="VHN20_12165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004127332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="isocitrate/isopropylmalate family dehydrogenase"
                     /protein_id="HEX2726565.1"
                     /translation="NVMKSGVLWNEVVTRVHKDEFADVALEHVLADNCAMQLVRWPKQ
                     YDVIVTDNLFGDVLSDIASMLTGSLGMLPSASLGEEDAGTGRRAAMYEPVHGSAPDIA
                     GKGLANPIAMIGSFGMALRYSFGMAREADLVDRAIANVLASGVRTKDIAAPGANAVGT
                     NEMGDAVLRELQTLA"
BASE COUNT          933 a         2084 c         2028 g          997 t
ORIGIN      
        1 tcggcaagcg catcggctac ggccgcgacc tcctggcgcc ccactcgctc accatgacca
       61 tggtcggcgc ctcgctgctg tgggtcggct ggttcggctt caacgccggc tcgaatctcg
      121 aggcgaacgg ggtaacggcg ctcgccatga tcaacacctt cgtggcgacc gcggccgccg
      181 cgctgtcgtg gctgttcgtc gagtgggccg tgaagggcaa gccttcgctg ctcggcatgg
      241 cgtctggcgc catcgccggc ctcgtcgcgg tgacgcccgc ctcgggcttc tccgggccga
      301 tgggggcgat cgtcctcgga ctcgtcgccg gcgccgtgtg cttcgtcttc tgctcgagcg
      361 tgaagaacgc gctcggctac gacgacagcc tcgacgtgtt cggcatccac tgcatcggcg
      421 gcatcctcgg cgcgctggcg accggaatcc tggtcaatcc ggccctcggc ggggccggca
      481 tcccggacta tgtcaccaag cccggagagc ttgctctcgc ggattacgac ttcgcgacgg
      541 ccgtgtgggc gcaggccaag gcagtcctcc tgacgctcgc ctggtccggc atcggctcgg
      601 cgatcctcta caaggtcgtc gacctgatcg tcgggctgcg cgtcaccccc gacgaggagc
      661 gcgaaggcct cgatctcgcc gaccacggcg agcgggccta caactactga gcctgggagc
      721 gtgatccggc gaagcggaca ccgcttcgcc ggaagagacg catgcagggg gctccatctg
      781 aattgatcct gctctcggct gctccgaaaa aagaagggcc cggtcctcag gaccgggccc
      841 ttgttgctcc gtcaacgtct gccttagcgg cagacctcct ggcggcgaac ctgcatgacg
      901 ccgttcacgt agacgcgctt ggtgcggatg acgcaatcct cgccgtcgtc ctcgacgatc
      961 acgcggcgct ggcgaaccga gccggtgtag taggggtcat gcgccccggc agatccgacc
     1021 gcggcacccg cagcaaagcc gccgaccgcc ccggcaatag ccgcggcatt gcgcccattt
     1081 tccgcctggg acggagatac cgtggagccg agcgccacaa tagccatggc gcccgagatc
     1141 agcgttgctt tcaaagttga atccttaaac atgccagctc tcctgttctt ctcggataaa
     1201 tccctcagga gcgatttggt ttcatcaata tgtatgcgga ttcagcaaca ccttcgtagg
     1261 ccggaatgcc gcgccagctc accgacagcc ggaaattgcg ccttgcgctt ttgcaagcat
     1321 cgggcgcgcg ccggatcttg aatgtggcgc acgagcaaga tcggcgaagt gggcccactt
     1381 cgccgggcag gttcgcagga gataaagaga gatcgcggct tgggttccgc cgaagcggag
     1441 cgctacgccg ctttcttctt ggccgtgagc aggccgcggt tgatcagcgc ctcggcgatc
     1501 tggatggcat tgagcgctgc gcccttgcgc aggttgtcgg acacgcacca gaacgagaga
     1561 ccgttctcga cggtgaagtc ctcgcgcagc cgcgagatgt aagtcgggtc ctcgccggcg
     1621 gcctcgtgcg gcgtgatgta gccgcccggc tcgcgcttat cgagcacgac gatgcccggc
     1681 gcctggcgca gcacgtcgcg cgcctcgtcg gccgtgatcg gcttctcgaa ctccacgttg
     1741 acggcttccg agtggctgat gaagaccggc acgcgcacgc aggtcgcggt cagcttgatc
     1801 ttcgggtcga ggatcttctt ggtctcgacc atcatcttcc attcttcctt ggtgtagccg
     1861 tcctccatga acacgtcgat atgcgggatc aggttgaagg cgatccgctt cgggaacttc
     1921 tgagtcctga cctcgccggc cgtgaacacg gcgcgggtct ggtcgaacag ctcgtccatg
     1981 gcctccttgc cggcgccgga gacggactgg taggtcgcga cgacgacgcg cgtgatcctg
     2041 gcgtggtcgt gcagaggctt cagggccacc accagctggg cggtcgagca attcgggttg
     2101 gcgatgatgt tcttcttggt gtagccgcgc accgcgtcgc cgttcacctc gggcaccacc
     2161 agcgggacgt cctcgtcgta acgccaggcc gacgagttat cgatcaccac ggcgccctgc
     2221 gcgccgatgc gcggcgacca ctccttcgac accgtgccgc ccgccgacat caggcagatg
     2281 tcgacgtcgg agaagtcgta ggtgtcgagg gttttgacct tcagggtctt gtcaccgaag
     2341 gagacttccg tgccctggct gcggcgcgag gcgagcgcca ccacctcgtc ggccggaaag
     2401 gcgcgctcgg ccaggatttc gagcatctcg cgcccgacat tgcccgtcgc tccgaccacg
     2461 gcgaccttgt aacccatcgt tgttctcctg ttcggcttca gggcgcggtc gctaccggat
     2521 cgaaccgacc caccctgatg taatctggcg cacgggcgtt tcggcgaagt ggcgatcagt
     2581 tcaccggcgc atgctgtccc tcacatatag ggtggcgggc gtcgcgacaa cgtgaagctc
     2641 gccgcaaggt gtatctggca tccttgcccg gccaggaaag ggtcgctgat gcgccttgtc
     2701 gccaccccgc agctcggccg tcgccgcttc atgaccggcg ggctcgccgc gaccgggacg
     2761 ctgatcctga acgcgggcgg tgcggcgcag gggcggctcg tggccacccc ggcccagacc
     2821 gccggccctt tctatccggt ctccttcccg gccgacaccg acaacgacct ggtcctgctg
     2881 ctgggcagcg ccgcccgggc cgaaggcatc gtgacacatg tcatgggccg ggtgctcgac
     2941 gcggacggaa agccggtcgc gggcgccacc gtcgagatct ggcaatgcga cgcgcacggg
     3001 cgctacctgc accccggcga caccgggcgc cggccacgcg acagcgcctt ccagggttac
     3061 ggccggatcg cctcggcggc ggacggcgcc taccgcttcc ggacgatccg ccccgttccc
     3121 tatccggggc gtacgccgca catccatttc gcggtcacgg cgccggaccg gcgccagttc
     3181 gtcacgcaga tgtatgtggc gggcgagccg ctgaacgagc gggacgctct ttatagaagc
     3241 atccgcgacg cgcggcagcg gaaggcggtc accgtccggc tggagacggc gaacggcgtc
     3301 gagccggacg cgctcgcggg caccttcgat atcgtgcttg cgtgaaccgg cgcgccgcgc
     3361 gctcgcattc gcccgatctg aacggatggt tgacggattc ccgtcggcca aggcggcccg
     3421 taacgggcga ttcacactgc cggaggaatc gccgccgcgg acgacggatc ggacgagccg
     3481 aagcgccgga ttcgtgcgat gacacgcagg tcgccgcgag gtttctcgcg gcctgtgccg
     3541 agttccagcc ccgcatgcca accccgattg ccgcgcagcc acagggtttt gcgatccgcg
     3601 tcgagccgcg tcaggcgccc gcccatctcc ggcggcgtgg ccgccactcg gcgcgccggg
     3661 tttggatcgg cctcggatcg ggtgccgtga tggccgtggt cgcgtatgtc gcgcatcagg
     3721 gcgaagcgaa gcaggatacg gcggtcaggc cgcggccgca gcggctcgcc gcgaccgtgc
     3781 cgccgcccgc ctggcagccg atcggcaatc cgagcgcgat ctatgccgtc gatgcgccgg
     3841 ctctcgtgaa cctgcccttt gcgctcgagg cgcggcggca tgcgagcgga gcgcgcgagg
     3901 acgcgctcac ctacggcgct ttcgacaccg gcgccgagcc gcatgtccgt ctcgtcgtgc
     3961 aggacggcaa cggcgcgcaa ggtccgcaca gcttcttcgt cgacgtggcg cgcggcgccg
     4021 ccgacgccgg gctggcggtg atgcgcagcg cgcagcccgt cgcgctgccg accaagttcg
     4081 gcactgcgga agcggccgag gtggtcctgt ccgccgcgtc cgaccgcacc tgtcaggcgc
     4141 tgcgcctcgc gcatgcggac gccgaattcc atgtcgtcgc ctggtcgtgc ggcgcccccg
     4201 ggcgcgcggt cacgcagcgc gagctggcct gcctcgtcga tcgcctcgcg ctcacgccgg
     4261 cggcggcgga cgatgcggag ctgaaggcga tgttcgcgcg cgccgaaacg cagcgccatg
     4321 cggcctgtgc gccgacgccg gtcgcgcgcg tgcgcaaggc cgcggcgccg acgcgcgcac
     4381 cgaaacgcgt gcacaaaccc gcgcgcgctg cggaaccacg cgccaccgtg cggcgtctac
     4441 tcaaagcgct tcgataagtc ttaaccgtgt tcgactatcc gctcacatcg aaccggcatc
     4501 tgtgttagca tccaaatcgc accggggact tcagtcatgc gtcgtatcgc ttctcttggc
     4561 tctcttggcc ttctctcgat tgcggcggtg atggccgccg ctcccgccgc ggaggcgcag
     4621 cagcaaattc gctatcgcca ggatggccgg gtgctgatcc tcaacgtgaa gccgcgcagc
     4681 tatctcgacg cgggcaacgt cgtcccggtc ggctccgagc accgcgtcgg cacggccttc
     4741 agcgagtcgg tttcgtatct gaacatgccg ccctggcacc accagcgcga ccgcttcggc
     4801 gccggcacgc tgcccgaccc ggtgaccaat ggaccgttcg tcggcgccca aaaccccttc
     4861 ggcccgatcg actgggtcgc cccgcggtaa cgcacgacta tcgttccccg tgaggggaag
     4921 cttgcgcgca tgcagagcat gcgtgccgga tggggcggca gcgccatctt acgagatggt
     4981 ggcgctgcca ccccacccgg ccttcgtttc cgcggcgctc gacgtcccga cgcatcgcgg
     5041 gcttggcccg agacggcgtt tgcaggcgcg acctgcccat tcaggatagc gtcgcgccgt
     5101 atcccagcag aacggaggcg agcacgtagg cgccgaccgc gcccggcagc gtgcagacgc
     5161 ggggcttgtc tggccggctg ctggttcgtc ggtaaagaag ccgggtcaat gtcacgagaa
     5221 gaatgatcgc gattgtgaag ctcagcagag cctgaacggc tgggcggctg gcgaagctga
     5281 gcggggggac gatcaccacc gccgtcacga ggggcgcggc caggacgccg accactgcaa
     5341 aagtcactgc cgcgacgagc cgaccggacg tgcgcggatc ggcgttccgc agccggtggt
     5401 tcgcgcccat cacggcgccg aagccccacc aggcccagca tggaaatgca gcggtcgcga
     5461 tccccaggcc cagaagatgg acgatcagct gcgcggtgcg cacggcgcct gcatcaggcc
     5521 agcgtctgaa gctcacgcag gaccgcgtcg cccatctcgt tggtgccgac ggcgttggcg
     5581 ccgggggcgg cgatgtcctt ggtgcgcacg cccgacgcga gcacgttggc gatcgcccgg
     5641 tcgacgaggt ccgcttcccg agccatgccg aaggaatagc gcagcgccat cccgaacgag
     5701 ccgatcatgg cgatgggatt ggcgagaccc ttgccggcga tgtcgggcgc cgagccgtgc
     5761 accggctcgt acatggccgc gcggcggccg gtcccggcat cctcctcgcc cagcgaggcg
     5821 gagggcagca tgccgagcga gccggtcagc atcgaggcga tgtccgacag cacgtcgccg
     5881 aacaggttgt cggtgacgat cacgtcgtat tgcttgggcc agcgcacgag ctgcatggcg
     5941 caattgtcgg cgagcacgtg ttccagcgcc acgtcggcaa actcgtcctt gtggacgcga
     6001 gtcacgacct cgttccacag gacgcccgac ttcatgacgt tg
//
LOCUS       DATAIQ010000732         2308 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_156186, whole genome shotgun sequence.
ACCESSION   DATAIQ010000732 DATAIQ010000000
VERSION     DATAIQ010000732.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2308)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2308)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2308
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_156186"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(40..1092)
                     /locus_tag="VHN20_12170"
     CDS             complement(40..1092)
                     /locus_tag="VHN20_12170"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018259974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX2726566.1"
                     /translation="MNILFLHPNYPGQFKLLAKALAQQHGAHVVAVGQGAREAFPDAR
                     YIAYLEFFYRADGADLGFDPEFEAERNTMQSLALRNCPSLVAYAGADLCITPTEWQAS
                     LFPAHMRGHIRVAHEGIDTKLAAPRDDARFRLPDGRMLTRSDEVVTYVARALEPHRGF
                     HVFMRALPELLRRRPKAEVVIVGREAVSYGQGPAGGGSWKAAMLAEVGAGLDSGRVHF
                     MGTLPYAAYLRLLNVSSAHVYLTYPFVLSWSLLEAMSCGCAIVASATGPLFEVIEDGV
                     NGRLVDFFDQGALVEAIGALLDDPAASARLREAARRTAVERFDFATRTLPAYLDLLGV
                     ADGKALPAPARAGQSS"
     gene            1257..>2308
                     /locus_tag="VHN20_12175"
     CDS             1257..>2308
                     /locus_tag="VHN20_12175"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX2726567.1"
                     /translation="MRVMVLAHGHPELVAGGAERAAYSLFQRLREDPDVEHAVFVARV
                     EPQAVGHSALFGSFRSRADEIVATPPAVDGFTFQSLHLDVLRQMVDELVAFVRPTVVH
                     IHHFIFWGVEIVDLFKRAGVRVVFTIHEYAAICANYGQMIKVDGRLCYAASPAECSMC
                     FPAHSPGKFFVRNTVLRQLLDGVDAFVAPSRFLKQRFVAWGVAEARIVVIENMLDRLV
                     LARRRELPPRLPRRADARTRIVFGFFGQINPFKGLDILLQAALMLPDEVKARVEIRIH
                     GENRYYRTGEFGEKLAALLDQAGAVTRSMGAYRNEDVIGLMAACDWIVVPSVWWENSP
                     IVIQESRMAGRPMICS"
BASE COUNT          339 a          809 c          799 g          361 t
ORIGIN      
        1 gcaacgaccc ggagggcgac ggcgatgacc agcggccgct tacgagctct gcccggcgcg
       61 ggctggcgcg ggaagcgcct tgccgtccgc gacgccgagc aggtcgagat aggccggcag
      121 cgtcctggtg gcgaaatcga agcgctcgac ggcggtgcgg cgcgccgcct cgcgcagccg
      181 cgcgctcgcc gccgggtcgt cgagcagcgc gccgatcgcc tcgaccagcg cgccttggtc
      241 gaagaaatcg acgaggcggc cgttgacgcc atcctcgatc acctcgaaca gcggcccggt
      301 ggccgacgcg acgatggcgc agccgcagct catcgcctcg agcagcgacc acgacagcac
      361 gaaaggatac gtcaggtaga cgtgcgccga cgacacgttg agcagccgca gatacgccgc
      421 gtaaggcagc gtgcccatga aatgaacgcg gccggaatcg agcccggcgc cgacctcggc
      481 gagcatggcc gccttccagc tgccgccgcc ggcggggcct tgaccgtagc tgaccgcctc
      541 gcggccgacg atcaccacct cggccttcgg gcggcggcgc agcagctcgg gcagcgcgcg
      601 catgaacacg tggaagccgc ggtgcggctc gagcgcgcgc gccacgtagg tgacgacctc
      661 gtcgctgcgc gtcagcatgc gcccgtccgg cagccggaag cgcgcgtcgt cgcgcggcgc
      721 cgccagtttc gtgtcgatcc cttcgtgcgc caccctgata tgcccgcgca tgtgcgcggg
      781 gaacaggctc gcctgccact cggtcggcgt gatgcacagg tccgcccccg cataggcgac
      841 gagcgacggg cagttgcgca gcgccagcga ctgcatggtg ttgcgctccg cctcgaattc
      901 cggatcgaag ccgaggtcgg cgccatcggc gcggtagaag aactccagat acgcgatgta
      961 gcgcgcgtcc ggaaacgcct cgcgcgcgcc ctgaccgacc gccaccacgt gcgccccgtg
     1021 ctgctgcgcc agcgccttcg ccagcagttt gaactgtccg ggatagttcg ggtgcaggaa
     1081 gaggatattc accgtcgctc cgatcgggcc gcgcaccgcg cgccgtcgcg tccgagtagt
     1141 ctgcgcgcgc ggcgccgcgc ggtcggcatt gcggtggtgg accgtgcccc gcgcctagtc
     1201 aagcacccct gcctgcgtcg cgcgcgtcgc gctgcggacg ttcgacggag atcgctatga
     1261 gggttatggt tctggcgcac ggtcatcccg agctcgtcgc cgggggcgcg gagcgggccg
     1321 cctattcgct gttccagcgg ctcagggaag atccggatgt cgagcatgcc gtgttcgtgg
     1381 cccgcgtcga gccgcaggcc gtcggccaca gcgcgctgtt cggcagcttc cgttcgcgcg
     1441 ccgacgagat cgtcgcgacg ccgccggccg tcgacgggtt caccttccag tcgctgcatc
     1501 tcgacgtgct caggcagatg gtcgacgagc tcgtcgcctt cgtgcggccc accgtggtgc
     1561 acatccacca cttcatcttc tggggcgtcg agatcgtcga cctgttcaag cgcgccggcg
     1621 tgcgcgtcgt gttcacgatc cacgaatatg cggcgatctg cgccaattac ggccagatga
     1681 tcaaggtcga tggcaggctg tgctacgccg cttcgccggc cgaatgcagc atgtgctttc
     1741 cggcccattc gcccggcaag ttcttcgtgc gcaacaccgt cctcaggcag ctcctggacg
     1801 gcgtcgatgc gttcgtcgcg ccgagccgct tcctgaagca gcgcttcgtg gcgtggggcg
     1861 tcgccgaggc gcgcatcgtc gtcatcgaga acatgctcga ccgcctcgtc ctcgcccggc
     1921 ggcgcgagct gccgccgcgc ctgccgcgcc gtgccgatgc gcgcacccgc atcgtgttcg
     1981 gcttcttcgg ccagatcaat ccgttcaagg gcctcgacat cctgctgcag gcggcgctga
     2041 tgcttcctga cgaggtgaag gcgcgcgtcg agatccgcat ccatggcgag aaccgctact
     2101 accgcaccgg cgagttcggc gagaagctcg ccgcgctgct cgatcaggcc ggcgccgtga
     2161 cgcgatcgat gggcgcctac cgcaacgagg acgtgatcgg gctgatggcg gcgtgcgact
     2221 ggatcgtcgt gccgtcggtg tggtgggaga actcgccgat cgtcatccag gagtcgcgca
     2281 tggccgggcg gccgatgatc tgctcgaa
//
LOCUS       DATAIQ010000733         1572 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_407623, whole genome shotgun sequence.
ACCESSION   DATAIQ010000733 DATAIQ010000000
VERSION     DATAIQ010000733.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1572)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1572)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1572
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_407623"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(139..>1572)
                     /locus_tag="VHN20_12180"
     CDS             complement(139..>1572)
                     /locus_tag="VHN20_12180"
                     /inference="COORDINATES: protein motif:HMM:NF020121.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004565 - beta-galactosidase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-galactosidase trimerization
                     domain-containing protein"
                     /protein_id="HEX2726568.1"
                     /translation="DAAVRKVNPNARFIPNAGGGATSELDMKTVGEMSDILFADRQAR
                     RGLMVPWANGKNGKEYRAALGRKPIGGIFSVGVEEPYRWKDSVQNAAEIQLWAVDGVA
                     HGLRPWFAKFNGKPYDKRWFKPVEDLYVWHHRHERYLRNEQNLARVALVFSQQTARFY
                     GGEQTRARVEDHINGCYQALVESRIPFEMVHDRKLDRANISAFWTLVLPNIAALSDEQ
                     CGQIRDFVRRGGSVVATHETSLYDEWGKRRADFGLADLFEARFEGKVEPRMQNAYINL
                     AHPHPLLRGLEDTGRIIHGVGRVHTRHTRASRVPMTLVPSYPDLPMEDVYPRVPKTDV
                     PAVHIHEAGAGRVVFFPWDIDRTFWEVLSTDHLALLRNAFEWATNEEPVASVRGPGVV
                     DIAVWRQKDSVTLHLVNLTNPMMMKGPVREIVPLGAQKVRLRLPSAPRKVHLLVAGTP
                     AKYTGSGTAIEVDVPSVGMHEVVAVDL"
BASE COUNT          255 a          536 c          516 g          265 t
ORIGIN      
        1 tcggcgccgc ggccgccgag gccgatgata ccgacgttga tgcggtcgtt ggccccgagc
       61 gcggaggctc cggccgcgac tccggcgaga aaactgcgac gttccatcgc gggttcgaag
      121 ccgatgataa caccgccact agaggtcgac ggccaccact tcatgcatcc cgaccgaagg
      181 cacatcgacc tcgatcgcgg tgcccgatcc ggtgtacttg gcaggcgtac cggccaccag
      241 cagatgcact ttgcgcggcg ccgacggcag gcgcagccgg accttctgcg cgccgagcgg
      301 gacgatctcg cgcaccggtc ccttcatcat catcggattg gtgaggttga ccaggtgcag
      361 cgtcacgctg tccttctgcc gccacaccgc gatatccacc acacccggcc cgcggacgct
      421 cgccaccggc tcctcgttgg tcgcccactc gaaagcgtta cgcagcagcg cgaggtggtc
      481 ggtcgagagc acctcccaga acgtccggtc gatgtcccag gggaagaaca cgacccggcc
      541 cgcgcccgcc tcgtgaatgt gcaccgcggg cacgtccgtc ttcggcacgc gcggatagac
      601 gtcctccatg ggcagatcgg gatagctcgg caccagcgtc atcgggacac gtgaggcgcg
      661 cgtgtgccgc gtgtggacgc ggccgacgcc atgaatgatg cgccccgtgt cttcgaggcc
      721 gcggagcagc ggatgaggat gcgcgaggtt gatgtaggcg ttctgcatcc gcggctcgac
      781 cttgccctcg aagcgcgcct cgaacagatc ggcgagaccg aagtcggcgc ggcgcttgcc
      841 ccactcatcg tagaggctcg tctcgtgcgt cgcgaccacg ctgccgccgc ggcgcacgaa
      901 gtcgcggatc tggccgcact gctcgtccga aagcgcggcg atgttgggta gaaccagcgt
      961 ccagaacgcg ctgatgttcg cccggtcgag cttgcggtca tgcaccatct cgaacgggat
     1021 gcgcgattcg accagcgcct ggtagcagcc gttgatgtga tcctcgaccc gcgcccgcgt
     1081 ctgctcgccg ccgtagaagc gcgccgtctg ctgggagaag accagcgcga cgcgggcgag
     1141 gttctgttcg ttgcgcaggt agcgctcgtg gcgatgatgc cagacgtaga ggtcctcgac
     1201 cggcttgaac caccgtttgt cgtagggctt gccgttgaac ttggcgaacc acgggcgcag
     1261 tccatgggcg acgccgtcga ccgcccatag ctgaatctcg gccgcgttct gcaccgagtc
     1321 cttccaacgg tacggctctt cgacacccac actgaagatg ccgccgatcg gtttgcgtcc
     1381 gagcgccgcg cgatactctt tgccgttctt cccgttggcc caggggacca tcaggccgcg
     1441 ccgcgcctgg cggtcggcga acaggatgtc ggacatctcg ccgacggtct tcatgtcaag
     1501 ctcggaggtg gcgccgccgc ccgcgttggg gatgaagcga gcgttcggat tcaccttgcg
     1561 caccgcagca tc
//
LOCUS       DATAIQ010000734         1782 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_130943, whole genome shotgun sequence.
ACCESSION   DATAIQ010000734 DATAIQ010000000
VERSION     DATAIQ010000734.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1782)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1782)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1782
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_130943"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..343
                     /locus_tag="VHN20_12185"
     CDS             <1..343
                     /locus_tag="VHN20_12185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726569.1"
                     /translation="AFGLATGAAAWAQEFPTTMLPPGCQVGPAADAHNLCQPQKAVLD
                     FGGLAILADPNSPMRTVAWMGTFGVNGPTGLVPPGSDPDDTLVAVWQHDVTETGSISS
                     AAPRRAPAGNR"
     gene            complement(438..>1782)
                     /gene="murJ"
                     /locus_tag="VHN20_12190"
     CDS             complement(438..>1782)
                     /gene="murJ"
                     /locus_tag="VHN20_12190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019906639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0034204 - lipid translocation [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="murein biosynthesis integral membrane protein
                     MurJ"
                     /protein_id="HEX2726570.1"
                     /translation="FVPTYARVHETKGLDSARVFADRIFTLSLVVQIVLLAIALAATP
                     WVVRALAPGFAEDPAKFQLTVALTRITFPYLLFVTLVTVLSGVLNAHGRFAAAAAAPV
                     LLNVSMVAALAVSFLFPSAGHAAAWGVAVAGVLEFLLVWAAARRAGAAPTIARPRLDP
                     DSQAFLRTFWPAVLGSSVFQIAVLADTIIASTLGTGAPSSLYYADRLYQLPVGVIGIA
                     AGTVLLPEMTRRIAAGDVAGAHGAQNRAVGFTLALAAPFTVAFLMLPELIMTALFGRG
                     AFDAAAAQRAGAVLAAYAVGLPAVVLIRSAVASFHARADTMTPVIAALVAVAINVVLK
                     IALTEPLGVVGLALATAVGAWINVLLLFALAYRRDWTAPSGTLAKAAIAVVAASIALA
                     LFVIIGRPALARVLAGMAVWRDEALLAGLGLGGALVYGVTLLVALRALGLRLARS"
BASE COUNT          327 a          610 c          633 g          212 t
ORIGIN      
        1 cgcgtttggt ctcgcaaccg gagcggcggc atgggcgcag gaattcccca ccaccatgct
       61 tcctccggga tgccaggtcg gcccggccgc ggatgcgcac aatctgtgcc agccgcagaa
      121 agccgtcttg gacttcggcg gcctcgccat cctggccgac ccgaactcgc cgatgcggac
      181 ggtggcctgg atggggacct tcggggtaaa cggcccgacg ggccttgtgc cgccggggtc
      241 ggatcccgac gatacgctgg tcgcggtgtg gcagcatgac gtcacggaga cgggcagcat
      301 ctcgtcggca gcgccgcgac gcgcgccggc cggcaaccga taagcaagcg ggggcttcgg
      361 cccccgtttt cttccctgtt tcctgatatc gaaacaggac cctattcgac tgaatgcggt
      421 cggggctgga accgcactca gcttctcgcc aggcgcaggc cgagggccct gagcgcaaca
      481 agcagcgtca cgccgtagac gagggcgccg ccgaggccga ggccggcaag cagcgcctcg
      541 tcgcgccaga cggccatgcc ggccaacacc cgcgccagcg ccggccggcc gatgatcacg
      601 aacagcgcca gcgcgatgct cgctgcgacg acggcgatgg cggccttggc aagcgtgccg
      661 ctcggcgccg tccagtcgcg gcgataggcg agcgcgaaaa gcagcagaac gttgatccag
      721 gctccgaccg ccgtcgcaag cgccagcccg accacgccga gcggctccgt caatgcgatc
      781 ttcaagacca cgttgatggc gacggcgacg agggcggcga tcaccggcgt catcgtgtcg
      841 gcgcgggcgt ggaagctcgc cacggccgag cggatcagga ccaccgccgg cagcccgacc
      901 gcataggccg cgagcaccgc gcccgcgcgt tgcgccgctg ctgcatcgaa ggcgccgcga
      961 ccgaacaacg ccgtcatgat caactcgggc agcatcagga aggcgaccgt gaacggggcg
     1021 gcgagcgcca gcgtgaaccc gaccgcccgg ttctgggcgc catgcgcgcc ggccacgtct
     1081 cccgcggcga tgcggcgggt catctccggc agaagcaccg tccccgcagc gatgccgatc
     1141 acgccaacgg gcaactggta gagccggtcg gcataataga gcgacgatgg ggcgccggtt
     1201 cccagggtgg aggcaatgat agtgtccgcc aggaccgcga tctggaagac gctggagccg
     1261 agcacggccg gccagaaggt gcgcaagaag gcctgcgagt ccgggtcgag gcgcgggcgc
     1321 gcgatggtcg gggccgcgcc ggcgcggcgc gccgccgccc agacaagaag gaactcgagc
     1381 acgccggcaa ccgccacgcc ccaggccgcc gcatggccgg cgcttggaaa caggaagctg
     1441 acggccagcg cggcgaccat cgagacgttg agaagcaccg gagccgccgc cgctgctgca
     1501 aagcggccat gggcgttgag cacgcccgac aagaccgtga ccagcgtgac gaagagcagg
     1561 tagggaaacg tgattcgcgt cagcgcgacg gtcagttgga actttgccgg atcttcggcg
     1621 aagccgggcg ccagggcgcg cacgacccag ggcgttgccg cgagcgcgat cgccagcagc
     1681 acgatctgga cgacgaggct cagcgtgaag atgcggtcgg cgaacacgcg cgccgaatcc
     1741 aaacccttcg tctcgtgaac gcgggcataa gtcggcacga at
//
LOCUS       DATAIQ010000735         1700 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_37976, whole genome shotgun sequence.
ACCESSION   DATAIQ010000735 DATAIQ010000000
VERSION     DATAIQ010000735.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1700)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1700)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1700
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_37976"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..987
                     /locus_tag="VHN20_12195"
     CDS             <1..987
                     /locus_tag="VHN20_12195"
                     /inference="COORDINATES: protein motif:HMM:NF019474.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX2726571.1"
                     /translation="GWWRRPERAHISGCGWRSDHSGMLAHMRAAAIGLLITSAVYAQG
                     GAGVTAHPDLVYGRAGEKELMLDLYVPAGGKAPLVVWIHGGAWRQGSRRNPQAMYLTE
                     RGYAVASIGYRLSQEAIFPAQIHDCKAAIRWLRANAARYGYDASRIGAWGPSAGGHLA
                     ALLGTSGGVKELEGDGGNASQSSRVQAVVDFFGPTDLPAMARFPSNLDHAAADSPESQ
                     LIGGKVGDSLEKAALANPIRYITKDDPPFLILHGDKDMTVPINQSELLEKALREAGVP
                     VTYRVMQGAGHGGPAFTAPEVREQVASFFDEHIRRGVGASLPGGGASEKRAR"
     gene            complement(907..>1700)
                     /locus_tag="VHN20_12200"
     CDS             complement(907..>1700)
                     /locus_tag="VHN20_12200"
                     /inference="COORDINATES: protein motif:HMM:NF024896.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX2726572.1"
                     /translation="QHACALLALEARYPVLLFLDADVRLRPGAVARAAAFLDSSGAGL
                     VSGFPHQVTVTLLEKLLIPLVHFILLGFLPIDRMRRSLSPAYAAGCGQLMVTRRDAYD
                     RAGGHAAICATLHDGIRLPRAFRRAGIASDLFDATSLVSCRMYNGAHQVWNGLAKNAT
                     EGLGAPSRILPITVLLLAGQVLPFVLLVTHPGPVTALAAFFAWLPRMLSTRRFRQPLL
                     SAVLHPVGVLLLLAIQWHALTRSLLGRSSTWKGRAYAPADVLVEK"
BASE COUNT          308 a          474 c          669 g          249 t
ORIGIN      
        1 ggctggtgga ggaggccgga gcgggcgcac atttccggat gcggctggcg ctctgaccac
       61 tcaggtatgc tcgcacatat gcgtgctgcg gcaatcgggt tgctgataac gagcgcggtt
      121 tacgcgcagg gaggcgcggg cgtgacggcg catcctgacc tggtttacgg gcgagcgggg
      181 gagaaagagc tgatgctcga tctctacgtg cccgcgggcg gaaaggcgcc gctggtggtc
      241 tggattcacg gcggcgcttg gcggcagggg agccggcgga atccccaggc gatgtacctg
      301 accgagcgtg gttatgccgt agcgagcatc ggctaccgat tgagccagga ggcgattttc
      361 ccggcgcaga tccacgactg caaagcggcg atccggtggc tgcgcgcgaa cgcggcgcgg
      421 tacggatacg atgcgtcccg gatcggcgcg tgggggcctt cggcgggcgg gcacctggcc
      481 gcgctgctcg gtacgtctgg gggcgtgaag gaactcgaag gggacggcgg gaatgcgtcg
      541 cagtcgagcc gcgtgcaggc tgtggtggat ttcttcggac cgacggatct gccggcaatg
      601 gcgcgcttcc ccagcaattt agaccatgcg gcggccgact cgccggaatc gcagttgatc
      661 gggggcaagg tcggggacag tcttgaaaag gcggcgctcg caaatccgat ccggtacatc
      721 accaaagacg atccgccgtt tctgatcctg cacggcgaca aggatatgac cgtgccaatc
      781 aaccagagcg aattgctcga gaaggcgctg cgggaggcgg gcgtgccggt gacgtaccgc
      841 gtcatgcagg gcgcggggca cggcgggccg gcgttcacag cgccggaggt gcgggagcag
      901 gtcgcgtcat ttttcgacga gcacatccgc cggggcgtag gcgcgtccct tccaggtgga
      961 ggagcgtccg agaagcgagc gcgttagcgc gtgccactgg atggcgagca gtagaagaac
     1021 tccaacgggg tgcagcacgg ccgagagcag gggctggcgg aaacggcgcg tcgagagcat
     1081 gcgcggcagc caggcgaaga atgccgcgag cgccgttacg ggtccggggt gcgtcacgag
     1141 cagcacgaag ggcagcacct gacccgcgag tagcaatacc gtgatcggga gaatgcggga
     1201 gggcgcgccg agcccttcgg tcgcgttctt ggcaagcccg ttccagacct ggtgcgcgcc
     1261 gttatacatg cggcaggaga caagggacgt ggcatcgaac aggtcggacg caatgccggc
     1321 gcggcgaaaa gcgcgcggca gtctgatgcc gtcatggagc gtagcgcaaa tcgccgcgtg
     1381 tccaccggcg cggtcgtagg cgtcacggcg ggtgaccatc agttgcccgc atccggcggc
     1441 gtacgcgggg ctaaggctgc ggcgcatgcg gtcgatcgga aggaatccga gcaggatgaa
     1501 gtggacgagt gggatcagta gcttctcgag gagagtgacg gtgacctgat gcgggaagcc
     1561 gctgacgagt ccggcgccgc tcgagtcgag gaacgcggcc gcgcgcgcga cggcgccggg
     1621 tcgaaggcgg acatcggcgt cgaggaagag gagcacgggg tagcgggctt cgagggcgag
     1681 cagagcgcag gcgtgctgtt
//
LOCUS       DATAIQ010000736         1545 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_63330, whole genome shotgun sequence.
ACCESSION   DATAIQ010000736 DATAIQ010000000
VERSION     DATAIQ010000736.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1545)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1545)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1545
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_63330"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            222..1247
                     /gene="pdhA"
                     /locus_tag="VHN20_12205"
     CDS             222..1247
                     /gene="pdhA"
                     /locus_tag="VHN20_12205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007566197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045250 - cytosolic pyruvate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0004739 - pyruvate dehydrogenase
                     (acetyl-transferring) activity [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring) E1
                     component subunit alpha"
                     /protein_id="HEX2726573.1"
                     /translation="MAVAARQTKANKKTVSEQPEFSKDEELHAYREMLLIRRFEEKSG
                     QMYGMGLIGGFCHLYIGQEAVVVGMQMATQDGDQVITGYRDHGHMLACGMDPKGVMAE
                     LTGRRGGLSKGKGGSMHMFSKEKNFYGGHGIVGAQVSLGTGIAFANRYRDDGRVCLTY
                     FGDGAANQGQVYESFNMAELWKLPVVYVIENNRYAMGTAVNRASAQTDFSKRGVSFGI
                     PGEQVDGMDVRAVRDAGLRAIDFARSGQGPYILEMQTYRYRGHSMSDPAKYRTKDEVS
                     RMRDERDPIESARRRLLDEWKVPENDLKAIDAKVREIVNEAADFATHDPEPDPSELWT
                     DILLEKR"
     gene            1300..>1545
                     /locus_tag="VHN20_12210"
     CDS             1300..>1545
                     /locus_tag="VHN20_12210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003597454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HEX2726574.1"
                     /translation="MATDILMPALSPTMEQGKLAKWLKKEGDKVKPGDVLAEIETDKA
                     TMEVEAIDEGILAKILVPDDTDNVAVNTPIAILAGEGE"
BASE COUNT          308 a          497 c          500 g          240 t
ORIGIN      
        1 cactttcttg ggacgagtcc accgcaacga cgtcgtcatc atcacggggc cttgacgcgg
       61 ccgtgccggt gcatccatcg aggtgcggag cgtgtcggaa accgcatatc cccccagcac
      121 gttaggtcct catcgtgcag cccagatttg ccgcttgcct gctctcgctt tctccgcggc
      181 gctgggctaa cgtttttcgc aagcgagttc cggaggaaac tatggctgtt gcggcccgcc
      241 aaacgaaagc caacaagaag accgtttccg agcagcccga attcagcaag gacgaagagc
      301 tccacgccta ccgcgagatg ctgctgatcc gccgcttcga ggagaagtcg gggcagatgt
      361 acggcatggg cctgatcggc gggttttgcc acctgtatat cggccaggaa gcggtcgtcg
      421 tcggcatgca gatggcgacc caggacggag accaggtcat cacgggctat cgcgaccacg
      481 ggcacatgct ggcctgcggg atggacccga aaggcgtcat ggccgagctg accggccgcc
      541 gcggcggctt gtccaagggc aagggcggct cgatgcacat gttctcgaag gagaagaatt
      601 tctacggcgg ccacggcatc gtcggcgcgc aggtctcgct cggcaccggc atcgccttcg
      661 ccaaccgcta ccgcgacgac ggccgcgtgt gtctcaccta tttcggtgac ggcgccgcca
      721 accaggggca ggtctacgag agcttcaaca tggccgagct ctggaagctg cccgtcgtct
      781 acgtgatcga gaacaaccgt tatgcgatgg gcaccgcggt caaccgcgcc tcggcgcaga
      841 ccgacttctc caagcgcggc gtgtcgttcg gcataccggg cgagcaggtc gacggcatgg
      901 acgtgcgggc cgtgcgcgac gcgggcctgc gcgcgatcga tttcgcgcgc tcggggcagg
      961 ggccttacat cctcgagatg cagacctacc gttaccgcgg ccactccatg tccgacccgg
     1021 ccaagtaccg caccaaggac gaggtgagcc gcatgcgcga cgagcgcgac ccgatcgaga
     1081 gcgcgcgccg ccggctcctc gacgaatgga aggtcccgga gaacgatctc aaggcgatcg
     1141 acgcgaaggt gcgcgagatc gtcaacgagg cggccgactt cgccacccac gatccggagc
     1201 cggacccgtc cgagctgtgg accgacatcc tgctcgaaaa acgctgagcg caagcttcat
     1261 cacgcgccga tcaacgagtc ttccatcaac gagtgttcaa tggcgaccga catcctgatg
     1321 cccgccctct cgccgacgat ggagcagggc aagctcgcga aatggctcaa gaaggaaggc
     1381 gacaaggtca agcccggcga cgtgctggcc gagatcgaga ccgacaaggc gacgatggag
     1441 gtcgaggcga tcgacgaagg gatcctggcc aagatcctgg tgcctgacga taccgacaac
     1501 gtcgcggtca acacgccgat cgccattctg gccggcgagg gcgag
//
LOCUS       DATAIQ010000737         1800 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_37995, whole genome shotgun sequence.
ACCESSION   DATAIQ010000737 DATAIQ010000000
VERSION     DATAIQ010000737.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1800)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1800)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1800
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_37995"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(232..>1800)
                     /locus_tag="VHN20_12215"
     CDS             complement(232..>1800)
                     /locus_tag="VHN20_12215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015926882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIM barrel protein"
                     /protein_id="HEX2726575.1"
                     /translation="LAGLERAAADFHELGERAAKRGIRVGYEALGWGRHIYDYRDAWE
                     VVRRADHPAIGIVLDSFHIFSRRTDLKPLRSIPREKIFLVQLSDAPWLDMDIMQWSRH
                     FRCFPGQGDFPLADFMAAVADTGYDGPLSLEVFNDEFRAGSPRSVAVDGHRSLIFLLD
                     QLRGQAERLTRTLPPLPPRSKCLGIEFVEFAVDDESEAELTRFIGALGFRQRGQHKSK
                     AVTHWAQGAINIVINSDNEGFAHSYQLTHGPSVCALCLKVEDAAATLDRAEKLRDVPF
                     RQPVGPGELEVPSVRGLGGSLLYFVDPASELRAIWEVDFDPVAPAAARADAGLTVVDH
                     VSQSMYYEEMLSWLLFYNSLFDVTKTPQQDISDPGGIVKSQVIQTGDGALRIALNGSQ
                     SQHTLSSRFLSEFVGSGVQHIAFATDDIVTTVQRLRANGVEMLPIPENYYDDLEARID
                     LSPERLDVLRANGILYDRDDGGEFLQAYTQNFQNRFFFEIVERRGYKGFGAVNAPIRL
                     AAQSRLARKPMPAM"
BASE COUNT          315 a          566 c          630 g          289 t
ORIGIN      
        1 cgtcttcagc gaagaggagc aggaagcgtg ccgcgtcaag ctgcgcacgc cgagcctctt
       61 tcgcaagacg tgggaccact actattcgaa gatctaaagc attccttctc ccatagggag
      121 aaggtgtcgc cggaggcgac ggatgagggg aacgccctgt ccggaagcgg cgcatccctc
      181 accccggtcc gcggccgcgg actcgacccc ctcccgttcg ggagagggtg attacatcgc
      241 cggcatcggc ttgcgcgcga ggcgcgactg cgcggcgagg cggatcggcg cgttgacggc
      301 gccaaaacct ttgtagccgc gccgctccac gatctcgaag aagaagcggt tctggaaatt
      361 ctgcgtgtag gcctgcagga attcgccgcc gtcgtcgcga tcgtagagga tgccgttggc
      421 gcgcagcacg tcgagccgct cgggcgagag atctatgcgt gcctcgaggt catcgtaata
      481 gttttcggga atcggcagca tctcgacgcc attggcgcgc agccgctgca ccgtcgtgac
      541 gatgtcgtcg gtggcgaagg cgatgtgctg cacgcccgag ccgacgaact cggacaggaa
      601 gcgcgacgac agcgtgtgct ggctctgcga gccgttgagc gcgatacgca gcgcgccgtc
      661 gccggtctgg atcacctggc tcttcacgat gccgcccggg tcgctgatgt cctgctgcgg
      721 cgtcttggtc acgtcgaaaa gcgagttgta gaagagaagc caggacagca tctcctcgta
      781 atacattgat tgcgagacgt gatcgacgac ggtgagcccg gcatcggcgc gcgccgccgc
      841 cggcgcgacc ggatcgaagt cgacctccca tatggcgcgc agctcgctcg ccggatcgac
      901 gaaatagagg aggctgccgc cgaggccgcg caccgacggc acctcgagct cgcccggtcc
      961 gaccggctgc cggaacggca cgtcgcgcag cttctcggcg cgatcgagcg tcgccgcggc
     1021 atcttcgacc ttgaggcaca gcgcgcacac ggacggcccg tgcgtcagct ggtaggaatg
     1081 cgcaaagccc tcgttgtcgg aattgatgac gatgttgatc gcgccttgcg cccaatgcgt
     1141 cacggccttg gacttgtgct ggccgcgctg gcggaagccg agcgcgccga tgaagcgcgt
     1201 gagctcggcc tcggactcgt cgtcgacggc gaattccacg aattcgatgc cgaggcattt
     1261 cgagcgcggc ggcagcggcg gcaaggtcct ggtcagccgc tcggcttggc cgcgcagctg
     1321 gtcgagcagg aagatcagcg agcggtggcc gtcgacggcg acactgcgcg gcgagccggc
     1381 gcggaactcg tcgttgaaga cttccagcga cagcgggccg tcatagccag tgtcggcgac
     1441 cgccgccatg aagtcggcca gcgggaaatc gccctgtccg gggaagcagc ggaagtggcg
     1501 gctccactgc atgatgtcca tgtcgagcca gggcgcgtcc gagagctgca ccagaaagat
     1561 cttttcacgc ggtatggaac gcaggggctt caggtcggtg cgtcgcgaga agatgtgaaa
     1621 gctgtcgagc acgatgccga tggctgggtg gtcggcgcgc cgaaccacct cccaggcgtc
     1681 gcggtaatcg tagatgtgcc ggccccagcc gagcgcctcg tagccgacgc ggatgccgcg
     1741 cttcgcggca cgctcgccga gttcgtggaa atcggccgcg gcgcgctcga ggccggcgag
//
LOCUS       DATAIQ010000738         2829 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_131095, whole genome shotgun sequence.
ACCESSION   DATAIQ010000738 DATAIQ010000000
VERSION     DATAIQ010000738.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2829)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2829)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2829
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_131095"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2829)
                     /locus_tag="VHN20_12220"
     CDS             complement(<1..>2829)
                     /locus_tag="VHN20_12220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="indolepyruvate ferredoxin oxidoreductase family
                     protein"
                     /protein_id="HEX2726576.1"
                     /translation="ADTRGALKSVTLDDKYDLSQDRVFITGTQAIIRLLLMQRERDRL
                     AGLNTAGFVSGYRGSPLGALDQNLWRAKAFLDAASIVFKPGLNEELAATAVWGSQQAE
                     MRGEGRYDGVFGLWYGKGPGVDRSGDVFRHANMAGSSKHGGVLALMGDDHTAESSTVA
                     HQSEFHFVDVMVPILNPAGVQEILDYGLYGYAMSRFCGSWVAFKCVKENIESTASVDG
                     HIDRVKIVTPDDFRMPPGGLNIRPRDIVLEQEARLHDYKRDAMLAFVRANNLNRVMLT
                     GGRIPKIGVITVGKSYLDVRQAMDELGLDEVTANDMGLRLYKVACPWPLSQRELVDFA
                     RGLDLVMVVEEKRSLIEVQVREELYGTANQPVCIGKKDEEGRWLFPVKGALDPNDIAI
                     ALGERLLRHHRNDALAARVARLKDAQRVLAATGDVATRIPYFCPGCPHNSSTRVPEGA
                     RAYAGIGCHYMAQWMDRATEGFTQMGGEGANWVGECAFSTRPHVFQNLGDGTYDHSGA
                     LALRWAIATRTNITYKILFNDAVAMTGGQKPEGDLTVDRIARQVRADGVERIAVVSDE
                     PKKYPKDTQWPSGVTFHHRDDLDAVQRDLATVPGVSVLIYDQTCAAEKRRRRKRGEFP
                     DPDKRVLINDLVCEGCGDCSVQSNCVAVQPLETEYGRKRQIDQSSCNKDFSCVKGFCP
                     SFVTVHGAKPRRAKPAAVSTEDVPVAALPEPQLPAIDHTFNIIVTGVGGTGVVTIGAI
                     LGMAAHLEGKGLGMIDMAGLAQKGGAVYSHVRLANTQDEIHAIRVTAGAADLVLGCDL
                     VVTGTKKVLAAVKPGRTALVVNTAEVMPGDFTRNADFSLPAERIKRAISAAAGGEDVA
                     FVDATASATGILGNAIAANMFRLGFAYQLGHMPLSADAIRRAIELNGEAVKMNLDAFD
                     WGRRAAAEPARVAEAVAPVKEPTASRHLS"
BASE COUNT          416 a          928 c         1010 g          475 t
ORIGIN      
        1 gagagatggc gcgaggccgt cggctccttg accggcgcca cggcctcggc gacgcgcgcc
       61 ggctcggcgg cggcgcgacg gccccaatcg aaggcgtcga ggttcatctt cacggcttcg
      121 ccgttgagct cgatcgcacg gcggatcgcg tcggccgaca gtggcatgtg cccgagctga
      181 taggcgaagc cgagcctgaa catgttggcc gcgatcgcat tgccgaggat cccggtcgcg
      241 ctcgccgtcg cgtcgacgaa ggcgacgtcc tcgccgccgg cggcggcgct gatcgcgcgc
      301 ttgatccgct cggcgggaag cgagaagtcg gcgttgcggg tgaagtcgcc gggcatgacc
      361 tcggcggtgt tgacgacgag ggccgtgcgg cccggcttca cggcggcgag caccttcttg
      421 gtgccggtga cgacgaggtc gcagccgagc acgaggtcgg ccgcgcccgc ggtgacgcgg
      481 atcgcatgga tctcgtcctg agtgttggcg aggcgcacgt gcgagtagac ggcgccgccc
      541 ttctgggcga ggccggccat gtcgatcatg ccgaggccct tgccctcgag atgggccgcc
      601 atgccgagga tcgcgccgat ggtcacgacg ccggtgccgc cgacgcccgt gacgataatg
      661 ttgaaggtgt ggtcgatcgc cggaagctgc ggctccggca gcgccgcgac cggcacgtct
      721 tcggttgaaa ccgccgcggg cttcgcccgg cggggcttcg cgccgtggac ggtgacgaag
      781 cttgggcaga agcccttcac gcaggagaag tccttgttgc aggacgactg gtcgatctgg
      841 cgcttgcggc cgtactcggt ctcgagcggc tgcacggcga cgcagttcga ctgcacggag
      901 cagtcgccgc agccttcgca gacgagatcg ttgatgagca cgcgcttgtc cggatcgggg
      961 aactcgccgc gcttgcgccg gcggcgcttt tccgccgcgc aggtctggtc gtagatcagc
     1021 acgctgacgc ccgggacggt tgccaggtcg cgctgcacgg cgtcgaggtc gtcgcggtgg
     1081 tggaacgtga cgccggacgg ccactgcgtg tctttcgggt atttcttggg ctcgtcgctg
     1141 acgacggcga tgcgctcgac gccgtcggcc cgcacctgcc gtgcgatccg atcgaccgtt
     1201 aggtcccctt ccggcttctg gccaccggtc atcgccacgg cgtcgttgaa caggatcttg
     1261 taggtgatgt tcgtgcgcgt ggcgatcgcc cagcgcaagg cgagcgcgcc ggagtggtcg
     1321 taggtgccgt cgccgagatt ctggaagacg tgcgggcggg tcgagaaggc gcattcgccg
     1381 acccagttcg caccctcccc gcccatctgc gtaaaacctt ccgtggcgcg gtccatccac
     1441 tgcgccatgt aatggcagcc gatgccggca taggcgcgtg cgccctccgg cacgcgcgtc
     1501 gagctgttgt gcgggcaccc ggggcagaaa tacgggatgc gggtcgcgac atcgccggtc
     1561 gccgccagca cgcgctgcgc atccttgagg cgcgcgacgc gcgccgccag cgcgtcgttg
     1621 cggtgatggc ggagcagccg ctcgccgagc gcgatggcga tgtcgttggg atcgagcgcg
     1681 cccttgaccg ggaacagcca gcggccctct tcgtccttct tgccgatgca gaccggctgg
     1741 ttggcggtgc cgtagagctc ctcgcgcacc tggacctcga tcagcgagcg cttctcctcg
     1801 accaccatga ccaggtcgag accgcgcgcg aagtccacga gctcgcgttg cgacagcggc
     1861 cacgggcagg ccaccttgta gaggcgcagg cccatatcgt tggccgtgac ctcgtcgagc
     1921 ccgagctcgt ccatcgcctg gcgcacgtcg aggtagctct tgccgacggt gatcacgccg
     1981 atcttcggga tgcgcccgcc ggtcagcatg acccggttga ggttgttggc gcgcacgaaa
     2041 gccagcatgg cgtcgcgctt gtagtcgtgc aggcgcgcct cctgctcgag cacgatatcg
     2101 cgcgggcgga tgttgaggcc gcccggcggc atgcggaaat catcgggcgt gacgatcttc
     2161 acgcggtcga tatggccgtc gacggaggcg gtcgactcga tgttctcctt gacgcatttg
     2221 aacgccaccc acgagccgca gaagcggctc atcgcgtagc cgtagagacc gtaatcaagg
     2281 atctcctgga cgccggccgg gttcaggatc gggaccatca cgtcgacgaa atggaactcg
     2341 gactggtgcg ccacggtcga tgattcggcc gtgtggtcgt cgcccatcag cgccagcacg
     2401 ccgccatgct tcgaggaacc ggccatgttg gcgtgccgga agacgtcgcc ggagcgatcg
     2461 acgccgggcc ccttgccgta ccacaggccg aacacgccgt cgtatctgcc ctcgccgcgc
     2521 atctcggcct gctgcgaacc ccagacggcg gtggcggcga gctcctcgtt gagacccggc
     2581 ttgaagacga tgctggcggc gtccaggaac gccttggcgc gccacagatt ctggtcgagc
     2641 gcgccgagcg gcgagccgcg atagccggac acgaagccgg cggtgttgag gcccgccagg
     2701 cggtcgcgct cgcgctgcat gaggagcagg cggatgatgg cctgcgtgcc ggtgatgaag
     2761 acccgatcct gcgaaaggtc gtatttgtcg tcgagtgtaa cgctcttgag cgctcctcgc
     2821 gtgtcggcc
//
LOCUS       DATAIQ010000739         1786 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_38189, whole genome shotgun sequence.
ACCESSION   DATAIQ010000739 DATAIQ010000000
VERSION     DATAIQ010000739.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1786)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1786)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1786
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_38189"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1204)
                     /locus_tag="VHN20_12225"
     CDS             complement(<1..1204)
                     /locus_tag="VHN20_12225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017485111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015079 - potassium ion transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KUP/HAK/KT family potassium transporter"
                     /protein_id="HEX2726577.1"
                     /translation="MTGTEAAALGSVQFPARTRFWSLTLGSIGVVYGDIGTSPLYALK
                     ESLSAASAGGAPTRDMVFGIVSLMLWALIVVVTLKYVLLILRADNDGEGGTPALMALL
                     QRVMGHRAAFIALLGMAGAALFYGDAMITPAISVLSAVEGLKVVTPAFAPFVLPLSLV
                     ILIALFAVQSHGTAAVAAWFGPITAVWFVALAAGGLLHLLDDASIVAAINPVHGVRFL
                     LSHGHTGLLALGAVFLTVTGAEALYADIGHFGRKPIQTAWLAFVFPALVVNYLGQGAL
                     VLARPETVENPFFLLYPDWALLPMIGLATAATIIASQAVITGAYSMTQQIIQLGLLPR
                     MEIRRTSETEKGQIYVPKINWLLLLLVTYLVVVFKSSSALASAYGVAVTGTMVVTTTM
                     AFFVAWKCW"
     gene            complement(1191..1667)
                     /locus_tag="VHN20_12230"
     CDS             complement(1191..1667)
                     /locus_tag="VHN20_12230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726578.1"
                     /translation="MLSKHEEERALSALLAQIETAPIATTALVERVLAQACPRLNSGR
                     TRNVRIGPMIDAQAWVDLGLWLIGWELPDWGVHSLSCDESRWNCTIGRRGLVINWADV
                     AQFQHDSAALAVLGAFVQAQLNKLVGVAPSIVATFRPAGGGAGAAPKAEGGQHDRH"
BASE COUNT          330 a          573 c          631 g          252 t
ORIGIN      
        1 tccagcattt ccacgccacg aagaaggcca tggtcgtcgt gacgaccatc gtgccggtga
       61 cggcgacgcc gtaggcggac gcgagggcgc tggaggattt gaagacgacc accagatacg
      121 tgaccaggag gagaagcagc cagttgatct tgggaacgta gatctggccc ttttccgtct
      181 ccgaggtgcg ccggatctcc atgcggggca gaaggccgag ctggatgatc tgctgggtca
      241 tcgaataggc gccggtgatc acggcttggc tggcgatgat ggtggcggcg gtggccagcc
      301 cgatcatcgg cagcaaggcc cagtccggat agagcaggaa gaaggggttc tcgaccgtct
      361 ccgggcgggc caggacgagg gcgccctgcc cgagatagtt gacgacgagc gccgggaata
      421 cgaaggcaag ccaggccgtc tggatcggct tgcggccgaa atggccgatg tcggcataga
      481 gcgcctccgc ccccgtgacg gtgaggaaca cggccccgag cgccaggagg cctgtgtggc
      541 cgtggctcag cagaaagcgg acgccgtgga ccggattgat cgccgcgacg atgctggcat
      601 cgtcgaggag gtgaaggagg ccgccagcgg cgagggccac gaaccacacg gcggtgatcg
      661 gcccgaacca ggcggcgacg gccgccgtcc catggctctg cacggcgaac agcgcgatca
      721 ggatgacaag gctgagcggc agcacgaagg gcgcgaaggc cggggtcacc accttcagtc
      781 cctcgaccgc ggacaggacc gagatcgccg gggtgatcat ggcgtcgccg tagaacagcg
      841 ccgcgccagc catcccaagc agcgcaatga aagcggcgcg atggcccatg acgcgctgca
      901 gcagcgccat cagcgcgggc gtgccgccct cgccgtcgtt gtcggcgcgc aggatcaaca
      961 gcacgtattt cagggtcacg acgacgatca gggcccatag catcagcgag acgatgccga
     1021 acaccatgtc gcgcgtcggc gcgccaccgg cggaggcggc gctgaggctt tccttcaacg
     1081 cgtagagggg gctggtgccg atgtcgccgt agacgacgcc gatcgagccg agcgtcaggc
     1141 tccagaagcg cgtgcgcgcc gggaattgca cgctgccgag ggcagccgct tcagtgccgg
     1201 tcatgctgtc cgccctccgc cttcggcgcc gccccggcgc cgccgcctgc gggcctgaag
     1261 gtcgccacga tgctcggggc gacgcccacg agcttgttga gctgcgcctg cacgaaggca
     1321 ccgaggacgg cgagcgcggc gctgtcatgc tggaactgcg ccacgtcggc ccagttgatg
     1381 acgagccccc ggcgaccgat cgtgcagttc cagcggcttt cgtcgcatga caggctgtga
     1441 acgccccagt ccggcagctc ccatccgatc agccacaggc caaggtcgac ccaggcttgc
     1501 gcatcgatca tcgggccgat ccgcacattg cgcgtgcggc ctgaattcag ccgggggcac
     1561 gcctgcgcaa ggacgcgctc cacgagagcg gtggtcgcga tgggcgcggt ctcgatttgt
     1621 gccaggagag cggaaagcgc gcgctcctct tcgtgctttg agagcatgat cggcatccat
     1681 cattcggacc ggctgccggc cggtcctgcc catcaagatg cgggctcgcc gataaaggct
     1741 cgatgcgaaa ctgcgccgcg ccgcataaag acggcataaa ggccgc
//
LOCUS       DATAIQ010000740         1693 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_131246, whole genome shotgun sequence.
ACCESSION   DATAIQ010000740 DATAIQ010000000
VERSION     DATAIQ010000740.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1693)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1693)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1693
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_131246"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(69..1574)
                     /locus_tag="VHN20_12235"
     CDS             complement(69..1574)
                     /locus_tag="VHN20_12235"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HEX2726579.1"
                     /translation="MTPAAVQEAFRDFVSRPALKIRLEPGERPAYEEAKGGAPAKGAG
                     TPPPSTKREVPPVGAFAPLDFPEIQRVTLSNGIRVNYAQRSAVPVTQMAIAFDAGQAA
                     DAPNGRGLAGLTLGLLDEGAGGLTSQQIAEREEELGAEISAGNSLDRSTVTMSALSGN
                     LAGSLDLVEQLVEQPTFAPADLERVRTQLLTGIAQQQSDPEGIATRVVPGLIWGASHP
                     YAVMGAGDPKAVKAFARADVVGWQQKWLRPDNAEIFVVSNLPLAQLTPQLEARFGKWA
                     APAVAKGVKQFTAPPAKPANPVIYLVNVPSAPQSVIIAAQRTGLDPRGDVIAAQAGSE
                     VLGGNFLSRINTDLRETKGWSYGVSGSFSLNRNGVPYTIAAPVQADKTGDSIAALNGQ
                     IGDLLGGKGVTGDELSRLVSNNVNTLPGRFETSGAVLSAMLSNSLLGRPDTYQEQLAG
                     KYRALTQTSIDQALKGAIDPKAFTWVVVGEAAKVRPQLEKLGYPVKVIEAK"
BASE COUNT          242 a          605 c          558 g          288 t
ORIGIN      
        1 cggtgcccat cgtgcagtcg cacctgacgc aggcgcagca gctactccgc gccgttcgtt
       61 gagccaggct acttcgcctc gatcaccttg accgggtagc cgagcttttc cagctgcggg
      121 cggaccttgg cggcttcgcc cacaacgacc caggtgaagg ccttcgggtc gatggcgccc
      181 ttcagcgctt ggtcgatgct cgtctgggtg agcgcccgat acttgccggc gagctgttcc
      241 tgataggtgt ccggccggcc gagcaggctg ttcgacagca ttgccgagag caccgcgccc
      301 gacgtctcga accggcctgg cagcgtgttc acgttgttgg agaccagccg gctgagctcg
      361 tcgccggtca cgcccttgcc cccaagcagg tcgccgatct gcccgttcag cgcggcaatg
      421 gagtcgcctg tcttgtcggc ctgcaccggc gcagcgatcg tgtacggcac gccgtttcgg
      481 ttgagcgaga agcttccgct cacgccgtag gaccagccct tcgtttcacg caggtcggtg
      541 ttgatgcgcg acaggaagtt gccgcccagt acctcgctgc ccgcttgcgc tgcgattacg
      601 tcaccgcgcg gatcgaggcc ggtgcgctgc gccgcgatga tcaccgactg aggcgcgctc
      661 ggcacgttca cgaggtaaat gacggggttg gccggcttgg ccggtggggc ggtgaactgc
      721 ttgacgccct tggccactgc cggcgccgcc cacttgccga accgggcctc cagctgcggg
      781 gtcagctgcg ccagcggcag gttggagacg acgaagatct ccgcattgtc cggccgcagc
      841 cacttctgct gccagccgac cacgtcggcg cgggcaaagg ccttcaccgc cttcgggtca
      901 cccgcgccca tcacagcata ggggtggctc gcgccccaga tcagccccgg cacgacgcgg
      961 gtggcgatgc cctcgggatc gctctgctgc tgcgcaattc cggtcagcag ctgcgtccgg
     1021 acccgctcca gatccgccgg agcgaaggtc ggctgctcga ccagctgttc gacgaggtcg
     1081 agcgaccccg cgagattgcc cgatagcgcc gacatcgtga ccgtgctccg gtcgaggctg
     1141 ttgccagcgc tgatctcggc gcccaactcc tcctcgcgct cggcaatctg ctgtgatgtg
     1201 aggccgcccg ccccctcgtc gagcaaaccc aaggtcagcc ccgccaggcc gcgtccattc
     1261 ggcgcatcgg ccgcctgccc cgcatcgaag gcgatcgcca tctgagtcac cggtacggcg
     1321 ctccgctgcg catagttgac gcgaatgccg ttcgagaggg tgacgcgctg gatctcgggg
     1381 aagtcgagcg gcgcgaaggc gccgaccggc ggcacttcgc gcttggtcga aggcggcggc
     1441 gtgcccgcac ctttggccgg agcgccacct ttggcttcct cataagcggg ccgctcgccc
     1501 ggctcgagac ggatcttcag cgcggggcgc gatacgaagt cgcggaacgc ctcctgcacc
     1561 gccgccggcg tcacccgcgc atagtcctcc agctggcgct tgaagaagtt gcggtcgccc
     1621 gcatagagct gcccttgcgc cagcgcgacg gccttgccgc cgaagccgcc gacctgctcc
     1681 agcccgcgga tcg
//
LOCUS       DATAIQ010000741         6015 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_453604, whole genome shotgun sequence.
ACCESSION   DATAIQ010000741 DATAIQ010000000
VERSION     DATAIQ010000741.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 6015)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6015)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6015
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_453604"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..152)
                     /locus_tag="VHN20_12240"
     CDS             complement(<1..152)
                     /locus_tag="VHN20_12240"
                     /inference="COORDINATES: protein motif:HMM:NF021376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2076 family protein"
                     /protein_id="HEX2726580.1"
                     /translation="MNTQERQVIDDLFDKLREAERQSAAREPAAEAHIRARVDAQPSA
                     PYYMAQT"
     gene            complement(188..904)
                     /locus_tag="VHN20_12245"
     CDS             complement(188..904)
                     /locus_tag="VHN20_12245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
                     /protein_id="HEX2726581.1"
                     /translation="MNTPYAWQTRTAPTSAAYFDEGLRQHMLRVYNYMGIGLVLTGAV
                     AFLVASTPAIYQPIFGTPLKWVVMLAPLAFIFFMSFRIHAISAATAQTLFWAFCALMG
                     LSLASVFLVFTGTSIARTFFITAAMFGATSLYGYTTKRDLSKMGSFLIMGLIGVVIAS
                     LVNLFVGSTALQFAISIIGVIVFTGLTAYDTQNIKEQYAEGFGTEANSKLAVWGALSL
                     YLNFINIFQLLLSLTGTREE"
     gene            complement(935..1702)
                     /locus_tag="VHN20_12250"
     CDS             complement(935..1702)
                     /locus_tag="VHN20_12250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015930989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-sigma factor"
                     /protein_id="HEX2726582.1"
                     /translation="MTDPIVDADLHAFVDGQLDRARRMEVEGYLAGHPEVAARVMADL
                     RARDALVLSFGGNLPQRPRERVLEAARRLERGLVWRRIGLRLRRAAAVAILVGAGWLA
                     HAQVGLFEITESEASPKPPAFVEDARHSHATALIRARMASQREMLRYDPAEIESETGV
                     VLPTLPREWRVVDAQVFPSRLGHSVELVLETQAVGRASIFAARAPAFDVIAPTLARAQ
                     NAITVYWQSGELVYALTAAAPEAALEKAAARLHATLR"
     gene            complement(1695..2252)
                     /locus_tag="VHN20_12255"
     CDS             complement(1695..2252)
                     /locus_tag="VHN20_12255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012334282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEX2726583.1"
                     /translation="MDSGDDVIAQLAPLRRYARTLTRDESQAEDLVHDALVRAYERRS
                     TFRAGASLRNWLLSILHNTFIDGHRRRKAEQRRETEAAQLAEATFPAEQEGSVHLRQI
                     QQAFHALPKEQRAVLHLVAIEGLPYQEAAAALGIPLGTLMSRLGRARAALRAFDEGAR
                     PAAASPPPSGPPARPNLRVVGGSDD"
     gene            complement(2388..3344)
                     /locus_tag="VHN20_12260"
     CDS             complement(2388..3344)
                     /locus_tag="VHN20_12260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015918521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEX2726584.1"
                     /translation="MKLAYFDDFQIGIIDGDRIVDVTSLLGDIPHRDRRDLMAGLIEQ
                     FDRYRPKIEKAVAAQKGVPVTSVKLRPPLPRPRQIDCMAVNYMENGTLPAAEPINAFH
                     KSPSAIIGPEDTMVLTDVPATVFEGEGEMALVIGKRASHVRAAEAMSYVFGYMNFIDG
                     SARGLLPPGNTFYQVKSRETFAPIGPYIVTADEIADPQNLQIRLWVNGEIKQDFNTSD
                     MAHKIPRCIEWVSSIHALEPGDIIATGTNHRGLSAFQDGDVVELEADGLGRLRVHVRD
                     ELKRTWPRDTRLQNSQKLAAAGEKPPLTGVLSKQLTGKYAPT"
     gene            complement(3482..4351)
                     /locus_tag="VHN20_12265"
     CDS             complement(3482..4351)
                     /locus_tag="VHN20_12265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018388156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX2726585.1"
                     /translation="MSQAHLASADGLAPVADTVWTEHVSWIDRVPRGLAMIVLFLAFL
                     GIWQLVSISGIVSPIILPSPAETGRQIVFVGNNLLSGGYMLSALWITTKEVIYSFALA
                     TAIGFSLGVLVGETGFGEKAVMPYLVAIDTMPKIAFAPLFIAWLGFDISSKVALATFV
                     ATFPIVVGTAAGLHAADDNARMLFKTMGATRLQTLFKMKLPTGLPQLFTGLKIASVGV
                     MAGAITGEFLGGGKGFGELIRIAATQLDTGRVFALIIYLSFLGLAMFGTVVWLQRRLV
                     FWHKASVSGGALH"
     gene            complement(4348..5151)
                     /locus_tag="VHN20_12270"
     CDS             complement(4348..5151)
                     /locus_tag="VHN20_12270"
                     /EC_number="7.6.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018388155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2726586.1"
                     /translation="MSVAALAPAAVAARPVFELRGVSKTFARRSVQALDKVDLTLREG
                     EFAAVIGASGCGKSTLLKIMAGLLPPSSGSVMLAGTPVTGPRRDIGMMFQQATLFPWR
                     TTLENVVLPVEIRDGKPAARAKHKDALTLLELVGLKDFENVFPNELSGGMAQRAAICR
                     MLITEPTVLLLDEPFSALDELTREFMNMELQRICMARNATSFLVTHSIPEAVILSDVV
                     YVMSPRPGRFVEAVAIDLPRPRTLEMITSPRFGAFVDRIRGHLDRGAFL"
     gene            complement(5148..>6015)
                     /locus_tag="VHN20_12275"
     CDS             complement(5148..>6015)
                     /locus_tag="VHN20_12275"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX2726587.1"
                     /translation="GEGYFKEEGLNVTVQSVDGSAPVLQALAAGQAQIGRPGPAPVLN
                     ARARGVDVVFIYNALPKSSFGVVVKRDDPYKQVTDLKGKTIGTGTRDGAEVGFARAIL
                     NDAGMQQDKDFTFIPVGDGGPATAGFLRGDIQAYVAATSDAAILNARGMPVRDITPAK
                     FQSYFGNGYAAMRDYIDKNPDVIEGFGRAMVRATRFIMDPKNRDKALAHLAAGNPQEG
                     EDKKFAGALLEAVLAKATPPDTSKGWGYQNPQDWENWHKALLATGDLKQPLPSLEAAY
                     TNKFIEAWNKGK"
BASE COUNT          932 a         1947 c         2160 g          976 t
ORIGIN      
        1 gtctgcgcca tgtaataggg cgcgctcggc tgggcgtcga cgcgcgcgcg gatatgcgcc
       61 tcggccgcgg gctcgcgcgc ggcggactgg cgctccgcct cgcgcagctt gtcgaacaga
      121 tcgtcgatga cttggcgttc ctgcgtgttc ataaagcctc cccggtgcaa agatgtttga
      181 tcgctgctca ctcttcgcgc gtgccggtca ggctgagcag cagctggaag atgttgatga
      241 agttgaggta gagcgacagc gcgccccaca cggccagctt cgagttcgcc tccgtgccga
      301 agccttcggc gtattgctcc ttgatgttct gggtgtcgta ggcggtcagg cccgtgaaga
      361 cgatcacgcc gatgatcgag atcgcgaact gcaaggcggt cgagccgacg aacaggttga
      421 cgagcgaggc gatgacgacg ccgatcaggc ccatgatcag gaacgagccc atcttcgaga
      481 ggtcgcgttt cgtcgtgtag ccgtaaaggc tcgtcgcccc gaacatcgcc gccgtgatga
      541 agaaggtgcg cgcgatgctg gtgcccgtga acaccaggaa caccgaggcg agcgacaggc
      601 ccatcagggc gcagaacgcc cagaacaaag tctgcgcggt cgccgccgag atggcgtgga
      661 tgcggaacga catgaagaag atgaaggcga gcggcgccag catcacgacc cacttgagcg
      721 gcgtgccgaa gatcggctgg tagatggccg gcgtcgaggc gacgaggaac gccaccgcgc
      781 ccgtcagcac caggccgatg cccatgtagt tgtagacgcg cagcatgtgc tgccgcaggc
      841 cctcgtcgaa atacgcggcc gaggtcggcg cggtgcgggt ttgccaggca tagggtgtgt
      901 tcatcggttc aatccttctg caggttggtc ggtgtcagcg cagggttgcg tggaggcggg
      961 cggcagcctt ctcgagcgcc gcctcgggtg cggcggcggt gagcgcgtag acgagctcgc
     1021 ccgactgcca gtagacggtg attgcgttct gcgcgcgcgc cagggtcggc gcgatcacgt
     1081 cgaaggcggg cgcgcgcgcc gcgaagatcg acgcccgccc gaccgcctgc gtctcgagca
     1141 cgagctcgac gctgtgaccg agacgcgacg gaaacacctg ggcgtcgacg acgcgccact
     1201 cgcgcggcag cgtcggcagg acgacgccgg tttcggattc gatctcggcc ggatcgtagc
     1261 gcagcatctc gcgctgcgag gccatgcgcg cgcggatgag cgccgtcgca tgggagtgac
     1321 gcgcatcctc gacgaaggcg ggcggcttgg gcgaagcctc gctctcggtg atctcgaaca
     1381 ggccgacctg cgcatgcgcg agccagccgg cgccgaccag gatggcgacg gccgcggcgc
     1441 gccgcaggcg caggccgatg cgccgccaca caagcccgcg ttccagccgg cgggcggcct
     1501 cgagcacgcg ctcccgcggc cgctgcggca ggttgccgcc gaagctcagc accagcgcgt
     1561 cgcgggcccg caggtcggcc atgacgcgcg ccgcgacctc ggggtggccg gcgagatagc
     1621 cctccacctc catgcgccgg gcccggtcga gctggccgtc gacgaaggcg tgcaggtcgg
     1681 cgtcgacgat cgggtcagtc atcggaacct cccacgacgc ggagattggg acgggccggc
     1741 ggcccggatg gaggcgggct cgcggcggcg ggacgggcgc cttcatcgaa ggcgcgcaag
     1801 gcggcccggg cgcggccgag ccgcgacatc agggtgccga gcgggatgcc gagggcggcc
     1861 gcggcctcct ggtagggcag cccctcgatg gcgacgaggt ggagaactgc gcgctgctcc
     1921 ttgggcaagg cgtggaaggc ctgctggatc tgccgcagat ggacgctgcc ctcctgctcg
     1981 gccgggaacg tcgcctcggc cagctgcgcg gcttcggtct cgcggcgctg ctccgccttg
     2041 cgccggcgat ggccgtcgat gaacgtgttg tgcaggatcg acagcagcca gttgcgcagg
     2101 ctggcgcccg cgcggaaggt cgagcggcgc tcataggcgc gcaccagcgc gtcgtgcacg
     2161 aggtcttcgg cctggctctc gtcccgggtg agcgtccgtg catagcggcg caagggcgcg
     2221 agctgcgcga tcacgtcgtc gccgctgtcc atggccttct tcctgctcat gccccgtata
     2281 cggagcaggc ggccagctta atcccgccaa aaatgtcgca cccggcgacc ggggcgcgcc
     2341 atcgcctcat gctgcaaggc ggacgtcgtt gagcgggcgg cgccgcccta tgtcggggcg
     2401 tatttgccgg tcagctgctt cgacagcacg ccggtcagcg gcggcttctc gcccgccgcg
     2461 gccagtttct ggctattctg cagccgcgtg tcgcgcggcc aggtccgctt gagctcgtcg
     2521 cgcacatgca cgcgcagacg tccgaggccg tcggcttcca gttcgacgac gtcgccatcc
     2581 tggaaggcgc tgaggccgcg atggttggtg ccggtggcga tgatgtcgcc cggctcgagc
     2641 gcgtggatcg agctgaccca ttcgatgcag cgcgggatct tgtgggccat gtcgctggtg
     2701 ttgaagtcct gcttgatctc gccgttcacc cacaggcgga tctgcaggtt ttgcgggtcg
     2761 gcgatctcgt cggcggtgac gatgtagggg ccgatcggcg cgaaggtctc gcgcgacttg
     2821 acctggtaga acgtgttgcc gggcggcagc aggccgcggg ccgagccgtc gatgaaattc
     2881 atgtagccga acacgtagga catcgcctcg gcggcgcgca cgtgcgaggc gcgcttgccg
     2941 atcacgagcg ccatctcgcc ctcgccctcg aacacggtgg cgggcacgtc ggtcagcacc
     3001 atcgtgtcct ccggcccgat gatcgcgctc gggctcttgt gaaaggcgtt gatgggctcg
     3061 gccgccggaa gcgtcccgtt ctccatgtag ttgaccgcca tgcagtcgat ctgccgcggc
     3121 cgcggcagcg gcggcctgag cttcaccgac gtcaccggca cgcctttttg cgccgcgacc
     3181 gccttctcga ttttcggcct gtagcgatcg aactgctcga tcaggccggc catcaggtcg
     3241 cgccggtcgc gatgcggaat gtcgccgagc agggacgtca cgtcgacgat gcggtcgccg
     3301 tcgatgatgc cgatctggaa gtcgtcgaaa tatgccagct tcattgcgtt gcccccgagg
     3361 tgctcgttgc ggtgatgatg atggatggat gaaagcttca gcggttcggc agcgcgggcc
     3421 tcgttgcggt cggcccgcgg caggcgactt gtcgcatgat cgtccgtctg ccgcggctgg
     3481 ttcagtgaag cgcgccgccg ctgacgctcg ccttgtgcca gaagacgagg cggcgctgca
     3541 gccacacgac cgtgccgaac atggcgagcc cgaggaagct cagatagatg atgagcgcga
     3601 agacgcggcc ggtgtcgagc tgcgtggcgg cgatgcggat gagctcgcca aaacccttgc
     3661 cgccgccgag gaactcgccg gtgatggcgc cggccatgac gcccaccgat gcgatcttca
     3721 gcccggtgaa gagctgcggc aagccggtcg gcagcttcat cttgaacagg gtctgcaggc
     3781 gggtggcgcc catcgtcttg aacagcatgc gcgcattgtc gtcggcggcg tgcaggcccg
     3841 ccgcggtgcc gacgacgatc gggaaggtgg ccacgaacgt cgccagcgcg accttcgacg
     3901 agatgtcgaa tccgagccag gcgatgaaca gcggcgcgaa ggcgatcttc ggcatggtgt
     3961 cgatggcgac gaggtagggc atcaccgcct tctcgccgaa gccggtctcg ccgaccagca
     4021 cgccgagcga gaagccgatc gccgtcgcca gggcgaagct gtagatcacc tccttggtgg
     4081 tgatccaaag ggcgctcagc atgtagccgc ccgacaagag gttgttgccg acgaagacga
     4141 tctgccgccc cgtctcggcg ggcgacggaa ggatgatcgg cgagacgatg ccgcttatgc
     4201 tgaccagctg ccagatgccg agaaaggcga ggaacagcac gatcatcgcc agcccgcgcg
     4261 ggacgcggtc gatccacgag acgtgctcgg tccacacggt gtcggctacg ggggcaagac
     4321 cgtcggcgct cgcgagatgg gcctggctca taggaaggct ccccggtcga gatggccgcg
     4381 gatgcggtcg acgaaggcgc cgaagcgcgg gctggtgatc atctccagcg tgcgcgggcg
     4441 cggcaggtcg atggcgacgg cctcgacgaa gcggcccggc cgcggcgaca tcacatagac
     4501 gacgtcggac aggatgaccg cttcgggaat cgagtgggtg accaggaacg acgtggcgtt
     4561 gcgggccatg cagatgcgct gcagctccat gttcatgaac tcgcgcgtca gctcgtcgag
     4621 cgcgctgaac ggctcgtcca gaagcaggac agtcggctcg gtgatcagca tccggcagat
     4681 ggcggcgcgt tgcgccatgc cgccggacag ctcgttggga aagacgttct cgaagtcctt
     4741 gagaccgacg agctcgagca gggtgagcgc gtctttatgc ttagcgcgcg cggccggctt
     4801 gccgtcgcgg atctcgaccg gcagcaccac gttctcgagc gtggtgcgcc agggaaacaa
     4861 ggtcgcctgc tggaacatca tgccgatgtc gcggcgcggc ccggtcaccg gtgttccggc
     4921 cagcatgacg ctgcccgacg acggcggcag caggcccgcc atgatcttca gcagcgtgga
     4981 cttgccgcag ccgctggcgc cgatgacggc ggcgaactcg ccctcgcgca aggtcaggtc
     5041 gaccttgtcg agggcctgca cgctgcgccg cgcgaacgtc ttgctgacgc cgcgcagctc
     5101 gaagaccggc cgggccgcga ccgcggccgg cgccagcgcg gccacgctca tttgcccttg
     5161 ttccaggcct cgatgaactt gttggtgtag gccgcctcca ggctgggcag cggctgcttg
     5221 aggtcgccgg tggcgagcag cgccttgtgc cagttctccc aatcctgcgg gttctggtag
     5281 ccccagcctt tcgacgtgtc gggcggcgtc gccttggcga gcaccgcctc gagcagcgcg
     5341 ccggcgaact tcttgtcctc gccctcttgc gggttgccgg cggcgagatg cgcgagcgcc
     5401 ttgtccctgt tcttcgggtc catgatgaag cgcgtcgccc gcaccatggc gcgtccgaag
     5461 ccttcgatca cgtccgggtt cttgtcgatg tagtcgcgca tggccgcata gccgttgccg
     5521 aaatacgatt ggaattttgc cggcgtgatg tcgcgcacgg gcatgccgcg ggcgttgagg
     5581 atggcggcgt ccgaagtcgc ggccacgtag gcctggatgt cgccgcgcag gaagccggcc
     5641 gtggccgggc cgccgtcgcc gaccggaatg aaggtgaagt ccttgtcctg ctgcatgccg
     5701 gcatcgttca ggatggcgcg ggcgaagccg acctcggcgc cgtcgcgcgt gccggtgccg
     5761 atcgtcttgc ccttgaggtc ggtgacctgc ttgtacggat cgtcgcgctt gacgacgacg
     5821 ccgaacgagc tcttcggcag ggcgttgtag atgaacacga cgtcgacgcc gcgggcgcgc
     5881 gcattgagga ccggcgccgg gcccggccgc ccgatctgcg cctgcccggc ggccagggcc
     5941 tgcaggaccg gcgccgagcc gtcgaccgat tgcacggtca cgttcagccc ttcttccttg
     6001 aagtagccct cgccg
//
LOCUS       DATAIQ010000742         3764 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_408063, whole genome shotgun sequence.
ACCESSION   DATAIQ010000742 DATAIQ010000000
VERSION     DATAIQ010000742.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3764)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3764)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3764
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_408063"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..76)
                     /locus_tag="VHN20_12280"
     CDS             complement(<1..76)
                     /locus_tag="VHN20_12280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003603020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor protein MotB"
                     /protein_id="HEX2726588.1"
                     /translation="MAKKKRGGAHGGHGWFVTFADLMAL"
     gene            complement(92..862)
                     /locus_tag="VHN20_12285"
     CDS             complement(92..862)
                     /locus_tag="VHN20_12285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HEX2726589.1"
                     /translation="MDIATGVGLIGGAATIIIIILIDGGNFAGYYDKHAVIVIFGGAT
                     AATMVRFPFSVILHGLPMGFKYAFSLRSSHPRDLIEELTQIAEVVRKSGPMALENVQV
                     NDTFLAQGIRYVADGYDRDFIKDTMERDRDIFLQRLDEGSKVYRAYGDCAPAWGMVGT
                     ILGMVTMFANMSDPSKLGPAMATALLATLYGAIIANMVCLPLADKLHIKLEEEDISRS
                     LIIDGILLIRESKSPSLIKEMLVSYLPEHHRAELVEAA"
     gene            1243..3042
                     /locus_tag="VHN20_12290"
     CDS             1243..3042
                     /locus_tag="VHN20_12290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014890779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015441 - ABC-type beta-glucan transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015775 - beta-glucan transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucan ABC transporter ATP-binding protein/
                     permease"
                     /protein_id="HEX2726590.1"
                     /translation="MWLVRLYIRVLGQLGSDLRLGALLALANIGLAIAAFAEPILFGR
                     IIDVLTQAQTPGGPPVTLARLTPLIAAWIAFGLFTIVAGVVVALYADRLSHRRRLATM
                     ANYFEHVLQLPLAFHTATHSGRVLKVMLEGSNGMAWLWLGFFRDHFSTLISLTVLLPM
                     TVFLNWRLGILLVVLVVIFAGLTGYVLRKTETLQGSVERYHSSLAEHASDALGNVPVI
                     QSFTRIEAETRALRGIIHQLLQAQNPVLSWWALASVATRAAATITVTAIFLIGTWLHL
                     RNLATIGDIVMFMSIATMLIGKLQDAVGFVNSLFMQAPKMAEFFDILDTAPAVHDKPT
                     AKHVERFVGEVCFDNVSFSYDGRRPAILDVTFLVKPGETVALVGATGSGKSTTLALLH
                     RAFDPQSGGIKIDGDDIRDLSLASLRRNIGVVFQEPMLFARSIRENLQVGRPDVTEEE
                     MIVALERAQAKEFLMRQSDGLDTIIGERGRSLSGGERQRLSIARALLKNPPVLILDEA
                     TSALDAATERKLQRALDEVMKGRTTFVIAHRLATIRNAHRILVFDHGRIVEAGSFDEL
                     VAKGGRFAELARAQFMAAEPEHKDVKPAEVVMA"
     gene            complement(3105..>3764)
                     /locus_tag="VHN20_12295"
     CDS             complement(3105..>3764)
                     /locus_tag="VHN20_12295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter associated domain-containing
                     protein"
                     /protein_id="HEX2726591.1"
                     /translation="HRTNMRAIDADLPADEIVREVLSSPHTRLPLWRDNPDNIVGILH
                     VKDLLRALSAVGNDAGRLNVETIAIRPWFVPDTTSLRAQLKAFLARKVHFALVVDEYG
                     EVMGLITLEDILEEIVGAIEDEHDVLVQGVRPQADGSVIVDGSVPIRDLNRSLDWNLP
                     DEEATTVAGLVIHEARAIPDTGQVFHFHGFRFEVARKSRNRITVLRIVPAQPRPRRAA
                     E"
BASE COUNT          625 a         1249 c         1235 g          655 t
ORIGIN      
        1 gcaacgccat gaggtcggcg aaggtgacga accagccgtg cccgccgtgc gcgccgccgc
       61 gtttcttctt ggccacgctg tcgctccggc cctaggcggc ttccaccagc tcggcgcggt
      121 ggtgctcggg cagataggag acgagcattt ccttgatcag cgaagggctt ttcgattcgc
      181 ggataagcaa gatcccgtcg atgatcagcg acctggaaat gtcctcttcc tcgagcttga
      241 tgtgcagctt gtcggcgagc ggcaggcaga ccatgttggc gataatcgcg ccatagagcg
      301 tcgcgagcag cgccgtcgcc atcgccgggc cgagcttgga cgggtccgac atgttggcaa
      361 acatcgtcac catgccgagg atcgtgccga ccatgcccca ggcgggtgcg cagtcgccgt
      421 aggcccggta gaccttggag ccctcgtcca gacgctgcag gaagatgtcc cggtcgcgct
      481 ccatcgtgtc cttgatgaaa tcgcggtcat agccgtccgc cacgtagcgg atgccctggg
      541 ccaggaaggt atcgttgacc tgaacgttct cgagcgccat cgggccgctc ttgcgcacca
      601 cctcggcgat ctgggtgagc tcctcgatca ggtcgcgcgg atgggacgag cgcagcgaga
      661 acgcgtattt gaaccccatc ggcaggccgt gcaggatcac cgagaacggg aaacggacca
      721 tggtcgcggc ggtggcgccg ccgaagatca cgatcaccgc gtgcttgtcg taatatccgg
      781 cgaaattgcc gccatcgatc aggatgatga tgatgatcgt ggcggcgccg ccgataaggc
      841 cgacgcccgt tgcgatatcc atcgaagact cttctgaact caaacgacag aacgggcatc
      901 cgagaagggc gccacctgca cgccaccgta gggcggcccg ctgaagatca ggttaacctt
      961 gcgcttgcat ctgccgcctc ccgcacggcg ggagcggccc aggcccctcc ggggtgaacg
     1021 ccagcacggg ttttgcgtta ggcaaaaggc gggtgtggga ccagcccggc agaggcatcg
     1081 atggtgatcg caccggcgcc gctcggcgca ccagtatcgc gggttatgtg gggctcgggt
     1141 cggcggcccg ggcagccagg gacaacacag cccgggccgc gcttgccgtc ggcgccctct
     1201 gccgccatcc tgacacggtc aagcttggga gagtgacctt cgatgtggct cgtccgtctc
     1261 tatatccgcg tgctcgggca actcggctcc gacctgcggc tcggcgcgct gctggccctc
     1321 gccaatatcg ggctggctat tgcggcattc gcggagccca tcctgttcgg ccgcatcatc
     1381 gacgttctga cgcaggcgca gacgcctggc ggaccgccag tgaccttggc gaggctgacc
     1441 ccgctgatcg ccgcctggat cgccttcggg ctgttcacca tcgtcgccgg ggtcgtggtg
     1501 gcgctttacg ccgaccggct gtcgcatcgc cgccgactcg cgaccatggc caattatttc
     1561 gagcacgtcc tgcagctgcc gctcgccttc cacacggcga cccattccgg ccgcgtcctg
     1621 aaagtgatgc tcgaaggctc gaacggcatg gcgtggctgt ggctcggctt cttccgcgac
     1681 catttctcga cgctgatctc gctcaccgtc ctgttgccga tgacggtgtt cctcaactgg
     1741 cggctcggca tcctgctggt ggttctggtg gtgatcttcg ccggcctcac cggctacgtg
     1801 ctgcgcaaga cggaaaccct gcagggcagc gtcgagcgct accactcgag ccttgccgag
     1861 catgcgtcgg acgcgctcgg caacgtgccg gtgatccagt ccttcacgcg catcgaggcg
     1921 gagacccggg cgctgcgcgg catcatccac cagctgctgc aggcgcagaa cccggtcttg
     1981 tcctggtggg cgctggcgtc cgtggcaacg cgcgcggccg cgaccatcac ggtcacggcc
     2041 atcttcctga tcggcacgtg gctgcacctg cgcaacctgg cgacgatcgg cgacatcgtg
     2101 atgttcatga gcatcgccac gatgctgatc ggcaagcttc aggacgcggt cgggttcgtc
     2161 aactcgctgt tcatgcaggc gccgaagatg gccgagttct tcgatatcct cgacacggcc
     2221 ccggccgtcc acgacaaacc gaccgccaag catgtcgagc gctttgtcgg cgaagtctgc
     2281 ttcgacaatg tcagcttctc gtacgacggc cgccgtcccg ccattctcga cgtcaccttc
     2341 ctggtgaagc cgggcgagac cgtcgcgctc gtcggcgcca ccgggtcggg caagtcgacc
     2401 accctggcgc tgctgcatcg cgccttcgat ccgcagtcgg gcggcatcaa gatcgacggc
     2461 gacgatatcc gcgacctgag cctcgcctcc ctccgccgca acatcggcgt ggtgttccag
     2521 gagccgatgc tgtttgcgcg atcgatccgc gagaacctgc aggttggacg tcccgacgtc
     2581 accgaagagg agatgatcgt cgccctggag cgcgcacagg ccaaggaatt cctgatgcgc
     2641 cagtcggacg gcctcgacac gatcatcggc gagcgtggcc gctccctgtc gggcggcgag
     2701 cgtcagcgcc tgtcgattgc ccgcgccctg ctcaagaacc cgcctgtcct gatcctcgac
     2761 gaggcgacca gcgcgctcga cgcggcgacc gagcgcaagc tgcagcgcgc cctcgacgag
     2821 gtgatgaagg gacgcaccac gttcgtgatc gcgcacaggc tcgccaccat ccgcaacgcc
     2881 caccgcatcc tcgtgttcga tcacggccgc atcgtcgagg ccggcagctt cgacgagctc
     2941 gtcgccaagg gcgggcgctt cgccgagctc gcccgcgcgc agttcatggc cgccgagccg
     3001 gagcacaagg acgtcaagcc agccgaggtg gtcatggcgt aagccatcgt ccggcgaagc
     3061 gcggaccgct tcgccggaaa agatggcacc cgcaaaagtt cgggttactc tgccgcccgg
     3121 cgcgggcgcg gctgcgcggg cacgatgcgg agcaccgtga tgcggttgcg cgacttgcgc
     3181 gcgacctcga agcggaagcc atggaaatga aacacctgcc cggtgtcggg aatggcgcgg
     3241 gcttcgtgaa tgacgaggcc cgctacggtc gttgcttcct cgtcgggaag gttccagtcg
     3301 agcgaacgat tgaggtcgcg gatcggtaca gagccgtcga cgatcaccga gccgtcggct
     3361 tgtgggcgca cgccctggac cagcacgtcg tgctcgtcct cgatggcgcc gacgatctcc
     3421 tcgaggatgt cctcgagcgt gatgaggccc atcacctcgc cgtattcgtc gacgaccagc
     3481 gcgaaatgga ctttccgcgc caggaaggcc ttgagctggg cacgcaggct ggttgtgtcc
     3541 ggcacgaacc acggccggat ggcgatggtc tcgacattga gccggccggc atcgttgccg
     3601 acagcggaga gggcgcgcaa cagatccttc acatgcagga tgccgacgat gttgtcgggg
     3661 ttgtcgcgcc atagcggcag gcgcgtgtgc ggcgaggaca gcacctcgcg cacgatctca
     3721 tcagccggga ggtcggcatc gatggcgcgc atgttcgtgc gatg
//
LOCUS       DATAIQ010000743         6027 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_408150, whole genome shotgun sequence.
ACCESSION   DATAIQ010000743 DATAIQ010000000
VERSION     DATAIQ010000743.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 6027)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6027)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6027
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_408150"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..267)
                     /locus_tag="VHN20_12300"
     CDS             complement(<1..267)
                     /locus_tag="VHN20_12300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012319248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate O-methyltransferase"
                     /protein_id="HEX2726592.1"
                     /translation="MTVVSATLDEAPPHRVEAAAFVLALRARNIRDTAVLRAMECVSR
                     ELFAPRRFADLARRDLALPLPCGQTMTAPATVAAMLAALEARPGQ"
     gene            complement(314..1102)
                     /gene="surE"
                     /locus_tag="VHN20_12305"
     CDS             complement(314..1102)
                     /gene="surE"
                     /locus_tag="VHN20_12305"
                     /EC_number="3.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012319249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008252 - nucleotidase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HEX2726593.1"
                     /translation="MRILVTNDDGIHAPGLETLERIARQLSGDIWVVAPESDQSGVSH
                     SLSLNDPLRLRDVSERRFAIKGTPTDCVIMGVRHLMRDVRPDLVLSGVNRGQNVAEDV
                     TYSGTVAGAMEGTILGVPSIALSQAYGPGGREHVKWHCAERHAAGVIRRVLDEGVPAG
                     VMINVNFPDCEPDEVRGIAVTAQGQRSQDLLAVDGRIDGRGNPYFWVAFARHKSTPPN
                     GTDLWAIADRRISVTPLRLDLTDEPTMTRFAQAFADKSYDPSTR"
     gene            complement(1118..2425)
                     /gene="serS"
                     /locus_tag="VHN20_12310"
     CDS             complement(1118..2425)
                     /gene="serS"
                     /locus_tag="VHN20_12310"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012319250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004828 - serine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006434 - seryl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HEX2726594.1"
                     /translation="MHDIRFIREHAAAFDQGLVNRGLEPMSAALIALDDKRKAAIAAL
                     QAAQERRNALSKEIGQAKAKKEEARAQELMAEVARLKESVPQLEAAERTALRTLEEAL
                     AGIPNTPAPDVPVGKDEHDNVERHRFGAPRDLATPKQHFEIGEAMGTMDFETAAKLSG
                     SRFVVLRGQLARLERALGQFMLDLHTGEHGYTEVAPPLLVRDEVMFGTAQLPKFEDDQ
                     FSVFRGLHDADAQDEHLWLIPTAEVSLTNLVREAILSEDQLPLRFTALTPCFRAEAGA
                     AGKDTRGMLRQHQFTKCELVSITTPEGSADEHERMLASAETVLKRLDLPYRVITLCTG
                     DMGFASAKTYDIEAWLPGQATYREISSCSVCTDFQARRMNARYRPSDGKGPRFVHTLN
                     GSGVAVGRALIAVMENYQNEDGSVSVPDALAPYMGGLKRIERA"
     gene            complement(2495..3316)
                     /gene="tatC"
                     /locus_tag="VHN20_12315"
     CDS             complement(2495..3316)
                     /gene="tatC"
                     /locus_tag="VHN20_12315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HEX2726595.1"
                     /translation="MKHVKPEEPNEDDEIEASRAPLIDHLIELRQRLIKALIAFVVMF
                     FVCFWIAIPIYNILVGPYVRAVGSPEKAQLIYTHPLEFFFVQIQVAVFGAAFLAFPVI
                     ATQVYKFVAPGLYRNERNAFLPYLVATPVLFFVGALVVYFIAMPLLMRFSIGMQQLAA
                     ADAPTIQFLPKVNEYLSLIMTLIFAFGICFQLPVVLTLLARAGMIDAQFLKEKRRYAI
                     VIVFVIAAVLTPPDVISQVALAAPTLLLYEASILAVQMVEKKRAEEAARRAAAGD"
     gene            complement(3313..3753)
                     /gene="tatB"
                     /locus_tag="VHN20_12320"
     CDS             complement(3313..3753)
                     /gene="tatB"
                     /locus_tag="VHN20_12320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015928852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015031 - protein transport [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase protein
                     TatB"
                     /protein_id="HEX2726596.1"
                     /translation="MFDLSWGEVMVIGAVALIVIGPKDLPKALRTVGNMTAKVRRMAS
                     EFQNQFQDAMREAELDEIRKQVEEVKSVASLDTSYNPIQTAHDELKAAVESQGAVAVA
                     GPSELLPPPTPEPGVAPVLEPPAEAAVAEAIPGAPESKPDGAKA"
     gene            complement(3830..4111)
                     /locus_tag="VHN20_12325"
     CDS             complement(3830..4111)
                     /locus_tag="VHN20_12325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018043520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0043953 - protein transport by the Tat
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase TatA/TatE family
                     subunit"
                     /protein_id="HEX2726597.1"
                     /translation="MGTFSIWHWLIVGLLILLLFGGRGKISEMMGDFAKGIKAFKKGM
                     SEDDTAAVTPGQPVATTGEPVRTLEHQAPPSTGAAPAATSPTLGERKAG"
     gene            complement(4166..5290)
                     /locus_tag="VHN20_12330"
     CDS             complement(4166..5290)
                     /locus_tag="VHN20_12330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2726598.1"
                     /translation="MSEIGARGRDRVRFPRWGQRGTAGASIPAELAFEHVSQTYGATR
                     ALDDVSLVIRPGEIVCLLGHSGCGKTTLLRVAAGVETPSEGRVFLDRIEVSGPKTLLP
                     PEQRGIGLMFQDYALFPHLTILQNVTFGLRDLPAGEAEALGRRALARVGLERNAGDYP
                     DILSGGEQQRVALARSIAPRPGVLLMDEPFSNLDRRMRDAIREETIAILREMGATTIV
                     VTHDPEEAMRIADRIVLMRQGRVVQEGDAETIYRRPADIFAARFFCDFNEVEGVARGG
                     EVATPLGTFPAGGLGDGQPALVCVRPRGVQLRPAGEALPGRVVSRRFLGELDLLHIAV
                     QGLDAPLQARVGNRMKAEVGQDVGVHINPDEVLVFAAADP"
     gene            complement(5305..6021)
                     /gene="scpB"
                     /locus_tag="VHN20_12335"
     CDS             complement(5305..6021)
                     /gene="scpB"
                     /locus_tag="VHN20_12335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMC-Scp complex subunit ScpB"
                     /protein_id="HEX2726599.1"
                     /translation="MDNRMNVVPLRAHAHDHEPVQKPDHEEAVRIAEALLFAAAEPVG
                     AAELAGRLPEGADVEAILADLQERYAGRGVNLVRVAGKWAFRTASDLGFVLARNVTEP
                     RRLSRAAMETLAIIAYHQPVTRAEIEDIRGVATSKGTIDLLLETSWIRLRGRRRVPGR
                     PVTYGTTAAFLEHFGLDAIDDLPGLEELKGAGFLEGRVGDLSVPTPTDDTTLRDDEDP
                     LEDDFAPLDAGDDCGEPPPG"
BASE COUNT          905 a         2025 c         2153 g          944 t
ORIGIN      
        1 ctggccgggg cgcgcctcga gcgcggccag catcgccgcg acggtggccg gcgcggtcat
       61 ggtctgaccg catggcagcg gcaacgcgag gtcgcggcgc gccaggtcgg cgaagcggcg
      121 cggcgcgaac agctcgcggg aaacgcattc catggccctg aggacggccg tgtcgcggat
      181 attgcgggcg cgcagggcca gaacgaaggc tgcagcctcg acgcggtgcg gaggcgcctc
      241 gtccagcgtg gcggaaacga cggtcatgcg ggcgagactt cgcggcgatg ccctgattcg
      301 ccagacccta tcgtcaccgg gttgacggat cgtagctttt gtcggcgaag gcctgcgcga
      361 agcgcgtcat cgtcggctcg tcggtgagat cgagccggag cggcgtcacc gagatgcgcc
      421 ggtcggcgat cgcccacagg tcggtgccgt tgggcggcgt cgatttgtgg cgcgcgaagg
      481 cgacccagaa gtaggggttg ccgcgaccgt cgatgcgccc atcgacggcg agcagatcct
      541 ggctgcgctg gccctgggcg gtgacggcga tgccgcgcac ctcgtccggc tcgcaatcgg
      601 ggaagttgac gttgatcatg acgccggccg gcacgccctc gtcgagcacg cgcctgatca
      661 cgccggcggc gtgccgttcc gcgcagtgcc atttcacatg ctcgcgcccg ccggggccat
      721 aggcctgcga cagggcgatc gacggcacgc cgaggatcgt gccttccatg gcgccggcga
      781 ccgtgcccga ataggtcacg tcctcggcga cgttctgccc gcggttgacg ccggacagca
      841 cgagatcggg ccgaacatcg cgcatcaggt ggcgcacgcc catgatcacg cagtcggtcg
      901 gcgtcccctt gatggcaaag cgccgctccg agacgtcgcg caggcgcagc gggtcgttga
      961 gcgagagcga atgcgacacc ccgctctgat cgctctccgg cgcgaccacc cagatgtcgc
     1021 cggagagctg ccgggcgatg cgctcgagcg tctccagccc cggcgcgtgg atgccgtcgt
     1081 cgttggtgac gaggatgcgc atgccgggcc ccttccgtca cgcccgctcg atgcgcttga
     1141 gtccgcccat atagggcgcc agcgcgtcgg gcacgctgac gctgccgtcc tcgttctggt
     1201 agttctccat cacggcgatc agcgcccgcc cgacggcgac ccccgaaccg ttcagggtgt
     1261 ggacgaagcg cggccccttg ccgtcgctcg ggcggtaacg cgcgttcatg cgccgcgcct
     1321 ggaaatcggt gcacaccgag cagctcgaga tctcgcgata cgtcgcctgc cccggcagcc
     1381 acgcctcgat gtcgtaggtt ttcgccgagg cgaagcccat gtcgccggtg cacaaggtga
     1441 tgacgcggta tggcaggtcg agccgcttga gcacggtctc ggcgctggcg agcatgcgct
     1501 cgtgttcgtc cgccgaccct tccggcgtcg tgatcgagac cagctcgcat ttcgtgaact
     1561 ggtgctggcg cagcatgccg cgcgtgtcct tgccggcggc gccggcctcg gcgcggaagc
     1621 acggcgtcag cgccgtgaag cgcagcggca gctggtcctc ggagaggatc gcctcgcgca
     1681 cgagattggt gagagagact tcggcggtcg ggatcagcca gagatgctcg tcctgggcat
     1741 ccgcgtcgtg aagcccgcgg aagacggaga actggtcgtc ctcgaacttc ggcagctgcg
     1801 ccgtcccgaa catcacctcg tcgcgcacga gcagcggcgg cgccacctcg gtgtagccgt
     1861 gctcgcccgt gtgcaggtcg agcatgaact ggccgagcgc ccgctcgagc cgggcgagct
     1921 ggccgcgcag cacgacgaag cgcgagcccg aaagcttcgc ggccgtctcg aagtccatgg
     1981 tccccatcgc ctcgccgatc tcgaaatgct gcttcggggt ggcgaggtcg cgcggcgcgc
     2041 cgaagcggtg gcgctcgacg ttgtcgtgct cgtccttgcc gaccggaacg tcgggcgcgg
     2101 gcgtgttcgg aatcccggcc agcgcctcct ccagcgtcct gagggccgtg cgctcggccg
     2161 cttcgagctg cggcacggat tccttgaggc gcgccacctc cgccatcagc tcctgcgcgc
     2221 gcgcttcctc cttcttcgcc ttggcctggc cgatctcctt ggagagcgcg ttgcggcgct
     2281 cctgcgccgc ctggagggcg gcgatcgccg ccttgcgctt gtcgtcgagc gcgatcagcg
     2341 cggccgacat cggctcaagg ccccggttga cgagaccctg gtcgaacgcg gccgcatgtt
     2401 cgcggatgaa gcggatgtcg tgcatgaggg tgagctttgc ccgggaaaga cggggctatg
     2461 tcagcaatgc gccggcttgg caatcgcgtg gtggctaatc ccccgccgcg gcgcggcgtg
     2521 cggcttcctc ggcgcgtttc ttctcgacca tctgaaccgc caggatcgag gcctcgtaga
     2581 gcagcagggt gggagccgcc agcgcgacct ggctgatcac gtccggcggc gtcagcaccg
     2641 ccgcgatcac gaacacgatg acgatggcgt agcgccgctt ctccttgagg aactgcgcgt
     2701 cgatcatgcc ggcgcgggcc aggagcgtga gcaccaccgg cagctggaaa cagattccga
     2761 atgcgaagat cagggtcatg atcagcgaga gatactcgtt gaccttgggc aggaactgga
     2821 tggtcggcgc gtcggcggcg gcgagctgct gcatgccgat cgaaaagcgc atcagcagcg
     2881 gcatggcgat gaaatagacg accagcgcgc cgacgaagaa caggaccggt gtggcgacga
     2941 gatacggcag gaaggcgttg cgctcgttgc ggtagaggcc cggcgcgacg aacttgtaga
     3001 cctgcgtggc gatgaccgga aaggcgagga acgccgcgcc gaaaaccgcg acctggatct
     3061 gcacgaagaa gaattcgagc ggatgggtat agatcagctg cgccttctcg ggcgagccga
     3121 cggcgcgcac gtaaggcccg accaggatgt tgtagatcgg gatcgcgatc cagaagcaga
     3181 cgaagaacat caccacaaaa gcgatcagcg ctttgattag gcgctggcgc agctcgatga
     3241 ggtggtcgat cagcggggcc ctggacgctt cgatctcgtc gtcttcgttg ggctcctcgg
     3301 gcttcacgtg cttcatgcct tcgccccgtc gggcttgctc tcgggggcgc cgggaatcgc
     3361 ctcagccacg gccgcctccg ccggcggctc cagcacgggc gcgacgccgg gttccggcgt
     3421 cggcggggga agcagctcgc tcgggccggc cacagcgacc gcgccctgac tttcgacggc
     3481 ggccttgagc tcgtcgtggg cggtctggat cggattgtag ctggtgtcga gcgaggcgac
     3541 cgacttcacc tcctcgacct gcttgcggat ctcgtcgagc tccgcctcgc gcatggcgtc
     3601 ctggaactgg ttctggaact cggacgccat gcggcgcacc ttggcggtca tgttgccgac
     3661 ggtgcgcaat gccttgggca ggtccttggg cccgatcacg atcagcgcga cggcgccgat
     3721 caccatcact tctccccagc tcaggtcgaa catggctcgg cttcggacct ctcacaacac
     3781 gccgacgatc gcgccggcgc gaggccgaag cgatccgaaa ggcgtcggct cagccggcct
     3841 tgcgctcgcc gagggtcggg ctcgtggcgg cgggcgcggc gccggtggac gggggcgcct
     3901 ggtgctcgag cgtccggacc ggctcgcccg tcgtcgcgac cggctggccc ggggtgacgg
     3961 cggccgtgtc gtcctcggac atgcccttct tgaaggcttt gatgcccttg gcgaagtcgc
     4021 ccatcatctc ggaaatcttg ccgcggccgc cgaacagcag caggatcagc aagccgacga
     4081 tgagccagtg ccagatacta aaggtgccca tatcgtgctc ctgcgccgct ccgggcggcg
     4141 cgtggttatc tctctcccgc caaacctacg gatcggctgc ggcgaaaaca aggacttcat
     4201 cggggttgat gtggaccccg acatcttgtc ccacctccgc tttcatgcgg ttgccgacgc
     4261 gtgcctgcag gggggcgtcg agcccctgca cggcgatatg caggaggtcg agctcgccca
     4321 ggaagcgccg tgacacgacg cgtcccggca gtgcctcccc ggccggccgc agctgcacgc
     4381 cgcgcggccg cacgcagacc agcgcgggct gtccgtcgcc aagcccgccg gccggaaagg
     4441 tgccgagcgg ggtggccacc tccccgcccc gagccacacc ctccacctcg ttgaaatcgc
     4501 agaagaaccg ggcggcgaag atatcggccg ggcggcggta gatggtctcg gcgtcgccct
     4561 cctgaacgac gcgcccctgg cgcatcagga cgatgcggtc ggcgatccgc atcgcctcct
     4621 ccgggtcgtg cgtcacgacg atggtcgttg cgcccatctc gcgcaggatg gcgatggtct
     4681 cctcgcggat ggcgtcgcgc atgcgccggt cgagattcga gaacggctcg tccatgagca
     4741 ggacgcccgg gcgcggcgcg atcgagcggg ccagcgccac ccgctgctgc tcgccgccgg
     4801 acaggatgtc ggggtaatcg cccgcgttgc gctcgaggcc gacccgggcg agcgcgcgcc
     4861 gtcccaacgc ctcggcctcg cccgccggca ggtcgcgcag cccgaaggtc acgttctgaa
     4921 ggatcgtgag atgcgggaac agcgcataat cctggaacat caggccgatg ccgcgctgct
     4981 ccggcggcag cagggtcttg gggccgctca cctcgatgcg gtcgagaaag acgcggccct
     5041 cggacggggt ctcgacgccg gcggcgacgc gcagcagggt tgtcttgccg cagccggaat
     5101 ggccgaggag gcagacgatc tcgccgggcc tgatgaccag cgacacgtcg tcgagggcgc
     5161 gggtggcgcc gtaggtctgc gagacgtgct cgaaggcgag ctcggccggg atggaggcgc
     5221 cggccgtgcc ccgctgcccc cagcgcggga aacgcacacg atcgcgcccg cgggcgccga
     5281 tttcactcat acgcttgtga tggttcagcc gggcggaggc tcgccgcagt cgtcgcctgc
     5341 gtcaagcggc gcaaaatcgt cctcgagcgg gtcctcgtcg tcgcgcaggg tcgtgtcgtc
     5401 cgtgggcgtc ggcaccgaga gatcgccgac ccgaccttcc aggaagccgg cgcccttgag
     5461 ctcctcgaga ccgggcaggt cgtcgatcgc gtcgagcccg aaatgctcga gaaaggccgc
     5521 ggtggttccg taagtcaccg gacggccggg gacgcggcgc cgcccgcgca gccggatcca
     5581 gctggtctcg agcaagaggt cgatggtgcc cttggacgtg gcgacgccgc ggatgtcctc
     5641 gatctcggcg cgggtgacgg gctggtggta ggcgatgatc gccagggtct ccatggcggc
     5701 ccgggacagg cggcgcggct cggtcacgtt gcgcgccagc acgaaaccga gatcgctggc
     5761 ggtgcggaac gcccatttgc cggcgacgcg cacgaggttg accccgcgcc ccgcgtagcg
     5821 ctcctggagg tccgccagga tggcttcgac gtcggcgcct tccggcaggc ggccggcaag
     5881 ctcggcggcg ccgaccggct cggcggccgc gaacagcagc gcttcggcga tccggacggc
     5941 ttcctcgtga tcgggtttct gcacgggttc gtggtcgtgg gcgtgggcgc gcagcgggac
     6001 gacgttcatc ctgttatcca tggcttc
//
LOCUS       DATAIQ010000744         3196 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_38434, whole genome shotgun sequence.
ACCESSION   DATAIQ010000744 DATAIQ010000000
VERSION     DATAIQ010000744.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3196)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3196)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3196
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_38434"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..498
                     /locus_tag="VHN20_12340"
     CDS             <1..498
                     /locus_tag="VHN20_12340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017483371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter substrate-binding
                     protein PstS"
                     /protein_id="HEX2726600.1"
                     /translation="TTVNWPVGQGGKGNEGVAGTVKQVANSIGYVEYAYAKQSNIPYA
                     QLRNKDGQFVTPDDKAFAAAAANANWTAAPGFGISLTNQAGAQAWPITGATFILVHKS
                     PDKPDQVAETLKFFDWAYRSGDQLASDLDYVPLPDTVADQVRQVWTKEIKDKSGKPLY
                     QGKSM"
     gene            568..1518
                     /gene="pstC"
                     /locus_tag="VHN20_12345"
     CDS             568..1518
                     /gene="pstC"
                     /locus_tag="VHN20_12345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease subunit PstC"
                     /protein_id="HEX2726601.1"
                     /translation="MPVRAAGIARPSFFLDFDTRFRLASYGSALLILVVLAGLMAAML
                     WGAWPAFREFGLDFVTSSVWDVNNDRYGAWPAIAGTLTTSLIALVIGVPISMGIAVFL
                     TQLAPAWLKKPVGMAIELLAAVPSIIYGMWGLFVLAPVMARYVQVPLNELVAGIPILG
                     TILYSGVPSGAGIMTAGVILAFMIIPFVASVTRDILAQIPTVLRESAYGIGCTTWEVV
                     RHVLFPQAAVSIIGAIMLGLGRALGETMAVTFVVGNANRLSASIFDPGSTIASRIANE
                     FNEAVGMQLNALIALGCILFFVTFAVLVVARYLVSRVKVH"
     gene            1538..2425
                     /gene="pstA"
                     /locus_tag="VHN20_12350"
     CDS             1538..2425
                     /gene="pstA"
                     /locus_tag="VHN20_12350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstA"
                     /protein_id="HEX2726602.1"
                     /translation="MSDAAAAGPQTIPWRRVRRPRQLADRAMKIFAIAFTAIGVLALG
                     SILAMLTFQGVAALSPRIFVEVMPGPGSEGGGLANAIVGSVVLTFLGIAIATPIGVLG
                     GTYLAEYGRNSVLANVIRFVNDILLSAPSVLIGLFVYTLMVSPMGGYSGWAGSVALAI
                     IATPVIVRTTEDMLRIVPASLREAGAALGAPPARVIMSITWRAARAGIVTGIILATAR
                     IAGETAPLLFTALNNNFWFSPSLLGGVSNLPVTIFQFALSPYQNWQELAWAGALLITV
                     AILGLSIAARYLVQRERTR"
     gene            2422..>3196
                     /gene="pstB"
                     /locus_tag="VHN20_12355"
     CDS             2422..>3196
                     /gene="pstB"
                     /locus_tag="VHN20_12355"
                     /EC_number="7.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018267049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein
                     PstB"
                     /protein_id="HEX2726603.1"
                     /translation="MTSLTLAAPVATAAKPADATGPVRIGVRNLNFYYNDFRALKDIA
                     LDFYDRQVTALIGPSGCGKSTLLRTFNRIYSLYPEQRAEGEIILDGRNVLSAGIDVNE
                     LRSRVGMVFQKPTPFPMSIYDNVAFGLRLYERPSRAELDRRVEEALRKAALWDEVKDK
                     LRQSGTGLSGGQQQRLCIARAIAQKPEVILFDEPTSALDPISTGAIEELIEQLRLEFT
                     IVIVTHNMQQAARVSDLTAFMYLGELVEFDSTTRMFTAPK"
BASE COUNT          501 a         1117 c         1011 g          567 t
ORIGIN      
        1 accaccgtca actggccggt cgggcagggc ggcaagggca acgagggcgt ggccggcacg
       61 gtcaagcagg tcgccaactc gatcggctac gtcgaatacg cctacgccaa gcagagcaac
      121 atcccctatg cgcagctgcg caacaaggac ggccagttcg tcactcccga cgacaaggcc
      181 ttcgcggccg ccgccgccaa cgccaactgg acggccgcac ctggcttcgg gatctcgctg
      241 accaaccagg ccggcgcgca agcgtggccg atcacgggcg cgacgttcat cctcgtccac
      301 aagagcccgg acaagcccga ccaggtcgcc gagacgctga agttcttcga ctgggcctac
      361 aggagcggcg accagctggc ctccgatctc gactatgtcc cgctcccgga caccgtcgcc
      421 gaccaggtcc gtcaggtctg gacgaaggag atcaaggaca agtcgggcaa gcccctttac
      481 cagggtaagt cgatgtagca atgcggcttc gaccagccgg caggtgacat catggacggg
      541 cgaacgacac ttgttgcgga cgaaccgatg ccggttcgcg ctgccggcat cgctcgcccg
      601 tccttcttcc tggacttcga cacccgcttc aggttggcca gctacggctc ggcgctgctg
      661 atcctcgtcg tcctggccgg cctcatggcc gcgatgctgt ggggcgcctg gccggccttt
      721 cgggagttcg ggctcgattt cgtgaccagc tcggtctggg acgtcaacaa cgaccgctac
      781 ggcgcctggc cggcgatcgc cggcaccctg accacctcgt tgatcgcgct cgtgattggc
      841 gttcccatca gcatggggat cgccgtcttc ctgacgcagc tcgcgccggc atggctcaag
      901 aagccggtcg gcatggcgat cgagctgctg gccgcggttc cgagcatcat ctacggcatg
      961 tgggggctgt tcgtcctcgc gcccgtgatg gcacgctacg tgcaggtgcc gctcaacgag
     1021 ctcgtcgccg gcatcccgat cctcggcacc atcctctatt ccggcgttcc ctcgggtgcc
     1081 ggcatcatga cggccggggt aatcctggcg ttcatgatca ttcccttcgt cgcctcggtg
     1141 acgcgcgaca tcctcgcgca gatcccgacg gtcctgcgcg agagcgccta cggcatcggc
     1201 tgcacgacct gggaggtggt gcgccacgtc ctgttcccgc aagccgccgt aagcatcatc
     1261 ggcgcgatca tgctgggact tggccgggcg ctcggcgaaa ccatggccgt cacgttcgtc
     1321 gtcggcaatg ccaaccggct gtcggcgtcc atcttcgatc ccggctcgac catcgcctcg
     1381 cgcatcgcaa acgagttcaa cgaggccgtc ggcatgcagc tcaacgcgct catcgcgctc
     1441 ggctgcatcc tgttcttcgt caccttcgcg gttctggtcg tggcgcgcta tctcgtgtcg
     1501 cgcgtcaagg tgcattgagg ccatggcgat gcaaccgatg tccgacgctg ccgcggcggg
     1561 cccgcagacg atcccgtggc gccgcgtgcg gcgcccacgc cagctcgccg accgcgccat
     1621 gaagatcttc gcgatcgcct tcacggcgat cggcgtgctc gcgctcggct cgatcctcgc
     1681 gatgctgacc ttccagggcg ttgcggcgct gtcgccgcgc atcttcgtcg aagtcatgcc
     1741 cgggccaggc tccgaaggcg gagggctcgc caatgcgatc gtcggcagcg tggtgctcac
     1801 gttcctcggc atcgccatcg ccacgccaat cggcgtgctc ggcggcacct atctcgccga
     1861 atacggccgc aactcggtgc tcgccaacgt catccgtttc gtcaacgaca tcctgctctc
     1921 ggcgccgtcc gtgctgatcg ggttgttcgt ctatacgctg atggtgagcc cgatgggcgg
     1981 ctattcgggc tgggccggca gcgtcgccct cgccatcatc gccacgccgg tgatcgtgcg
     2041 caccaccgag gacatgctgc gcatcgtgcc ggcctcgttg cgggaggcgg gggcggcgct
     2101 tggagcgccg ccggcgcgcg tcatcatgag catcacctgg cgggcggccc gcgccggcat
     2161 cgtcaccggc atcatcctcg ccaccgcgcg catcgccggc gagacggcgc cgcttctgtt
     2221 cacggcgctc aacaacaatt tctggttcag cccgtccctg ctcggcggcg tctcgaacct
     2281 gcccgtgacg attttccagt tcgctctctc gccataccag aactggcagg agctggcctg
     2341 ggcgggagcg ctcttgatca cggtcgcgat cctgggccta tccatcgccg cacgctatct
     2401 cgtgcaaaga gagagaacgc gatgacgagc cttactctgg cagcgccggt cgccaccgcg
     2461 gcgaagcccg ccgatgcgac cggaccggtc cgcatcggcg tcaggaacct gaacttctat
     2521 tacaacgact tccgcgccct gaaggacatc gcgctcgact tctacgaccg gcaggtgacg
     2581 gcgttgatcg gtccctccgg ctgcggcaag tcgaccttgc tgcgcacctt caaccgcatc
     2641 tacagcctct atcccgagca gcgcgccgaa ggggagatca tcctcgacgg gcgcaacgtg
     2701 ctgtcggccg ggatcgacgt gaacgagctg cgctcgcggg tcggcatggt gttccagaag
     2761 ccgacgccgt tcccgatgtc gatctacgac aacgtcgcct tcgggctccg cctatacgag
     2821 cggccgtcgc gcgccgagct ggatcgccgc gtcgaggagg cgttgcggaa ggccgctctg
     2881 tgggacgagg tcaaggacaa gctgcggcag tccggcaccg gcctttcggg tggtcagcag
     2941 cagcgcctgt gcatcgcccg cgccatcgcc cagaaacccg aggtgatcct gttcgacgag
     3001 ccgacgtcgg cgctggaccc gatctcgacg ggcgcgatcg aggagctgat cgagcagttg
     3061 cgcctcgagt tcacgatcgt gatcgtcacc cacaacatgc agcaggcggc gcgcgtgtcc
     3121 gatttgaccg ccttcatgta tctcggcgag ctggtcgagt tcgactccac cacgcggatg
     3181 ttcacggcgc cgaaga
//
LOCUS       DATAIQ010000745         3215 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_63531, whole genome shotgun sequence.
ACCESSION   DATAIQ010000745 DATAIQ010000000
VERSION     DATAIQ010000745.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3215)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3215)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3215
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_63531"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(211..465)
                     /locus_tag="VHN20_12360"
     CDS             complement(211..465)
                     /locus_tag="VHN20_12360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015929525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726604.1"
                     /translation="MDFGTDERSGTDPRRLTILSNESCLACRRQLLQDRNALPHARLM
                     IVSSTPLIEAYGGGVETRYVCLDCGHTLIHSTGRFGKGWH"
     gene            complement(521..607)
                     /locus_tag="VHN20_12365"
     tRNA            complement(521..607)
                     /locus_tag="VHN20_12365"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(571..573),aa:Leu,seq:caa)
     gene            complement(894..1214)
                     /locus_tag="VHN20_12370"
     CDS             complement(894..1214)
                     /locus_tag="VHN20_12370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006614501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1476 domain-containing protein"
                     /protein_id="HEX2726605.1"
                     /translation="MTTFDDRKDAFEKKFAHDEELRFKATARRNKLLGLWAAQKLGKS
                     GADAEAYAKSVVLADFQEAGDDDVLRKVQKDLEGAGAVSETELRRVMTELMERAINEI
                     RTGS"
     gene            1466..2260
                     /gene="purC"
                     /locus_tag="VHN20_12375"
     CDS             1466..2260
                     /gene="purC"
                     /locus_tag="VHN20_12375"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010684691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004639 -
                     phosphoribosylaminoimidazolesuccinocarboxamide synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HEX2726606.1"
                     /translation="MDFLKPRYTPMNRRRRIYEGKAKVLYEGPEPGTLIQHFKDDATA
                     FNAKKHEVIDGKGVLNNRISEFVFQHLNDIGVPTHFIRRLNMREQLIREVEIIPLEVV
                     VRNVAAGSLAQRLGLEEGTQLPRSIIEFYYKNDALNDPMVSEEHITAFGWATPQEIDD
                     VMALAIRVNDFLSGLFLGVGIRLVDFKMETGRLWEGDVMRIVVADEISPDSCRLWDIR
                     SSDKLDKDRFRRDLGGLIEAYSEVARRLGILGENEKPGNGGPRLVQ"
     gene            complement(2390..3190)
                     /locus_tag="VHN20_12380"
     CDS             complement(2390..3190)
                     /locus_tag="VHN20_12380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020187431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1194 domain-containing protein"
                     /protein_id="HEX2726607.1"
                     /translation="MLRRCARTALLTAALALAALVGAVPAAAEEVDLALVIAVDISYS
                     MDPDEQDLQRAGFVEAFRSPLVHQAIRNGALGRIAVTYGEWAANWEQKVIVPWTVIED
                     PESAMAFAGRLAAQPTRRGPRTSVSGAIDFGVRLHSESGLTPTRRVIDISGDGANNQG
                     RSVTAARDDAVAQGVTINGLPIMLKRPSSYWDVVDLDVYYRECVIGGAGAFIVPVRTR
                     DEFVNAIKTKIIREVADYAPEPLIRRVQVFEGGGSCMAGEIQRERWGN"
BASE COUNT          546 a         1051 c         1020 g          598 t
ORIGIN      
        1 cggttccgtg ctccagcaaa gctcgagata gggcaggggt tccgtgtgat cgtcgcaaca
       61 aggccctcta cacgctcaaa acccacttgg tatttgacga ggtctgaact cggtctgaat
      121 gacgagagaa tggagcatat acagcgtcac gccgtgttct cgcgcgtgag aaagccgctt
      181 tcgggctagt ccgaagccgc gggcgcggtg ttagtgccag cccttgccga agcgtcccgt
      241 ggaatggatc agcgtgtggc cgcaatcgag gcacacgtag cgcgtctcga cgccgccgcc
      301 ataggcctcg atcagcggcg tcgaagacac gatcatcagc cgggcatgcg gcagcgcatt
      361 gcggtcctgc agcaactgcc gccggcatgc gaggcacgac tcgttagaca ggatcgtcag
      421 ccgacgcggg tcggtgcctg atcgctcgtc cgtgccaaaa tccatcgcca cgtcgatatc
      481 ctgggtcttg cgactggctg ctgtgaggcc cgtttgatct tggtgcccct ggccggagtc
      541 gaaccagcac ggtgttgcca ccacctgatt ttgagtcagg cgcgtctacc aattccgcca
      601 caggggccgt tatgcgcgag tatcatggcg cgtcgcgacg ggtcaaccga agcgccaccg
      661 tcgcgcaccg cacttcactc aatgcccaca acatgttgcg ctgccgttgg ccggagcttg
      721 ctgccccgcc tgacgcttag acggctcatc catgaggata ccgagaccgg catcgtatcg
      781 gccacgcttt gcggaggcgc agacgaaaag cgccagggaa cgcggtcccg tttatctctc
      841 gtcgagacgc cggagccggg ccggcaaagt gctgccactt tgccgggcgt tctctagctg
      901 ccggtcctta tctcattgat ggcgcgttcc atgagctcgg tcatcacccg gcgcagctcc
      961 gtctcgctga ccgcaccggc cccctcgaga tccttctgca ccttgcgcag gacgtcgtcg
     1021 tcgccggcct cctggaaatc ggcaagcacg acggacttgg cataggcttc ggcgtcggct
     1081 ccggacttgc cgagcttctg cgcggcccac aatccgagca gcttgttgcg gcgcgcggtc
     1141 gccttgaagc gcaactcctc gtcatgggcg aattttttct caaacgcgtc tttgcggtcg
     1201 tcgaaggtgg tcatcgggcg actttactcc cctgtgcggc gtggttaacg ggcatataaa
     1261 gcggctggcc gcgggacgcc accctcgggc cgttccgggc attgtttttc gcgcctttgt
     1321 tcaccattta gcccagtggt cgggatgccg cgttgtgctt acaacatcct tcggctagtt
     1381 tgccttgcaa gcggacggcc ggtcatccgc ctcgaccgcg ccgcgcctgc cgcgggtcta
     1441 aattctccag gagccacggc cacttatgga cttcctcaaa ccacggtaca cccccatgaa
     1501 ccgccgccgt cgcatctatg agggcaaggc gaaggtcctc tatgaggggc ccgagcctgg
     1561 gacgctcatc cagcacttca aggacgacgc gaccgccttc aatgccaaga agcatgaggt
     1621 gatcgacggc aagggcgtgc tgaacaaccg catctccgaa ttcgtgttcc agcacctcaa
     1681 cgatatcggg gtgccgacgc acttcatccg gcgcctcaac atgcgcgagc aactgatccg
     1741 tgaggtggag attattccac tcgaggttgt ggttcgcaac gtcgcggcgg gttcgcttgc
     1801 gcagcggctt ggccttgagg aaggcacgca actgccgcgc tcgatcatcg agttctatta
     1861 caagaacgac gccctcaacg atccgatggt gtcggaggag catatcaccg cgttcggctg
     1921 ggcgacgccc caggagatcg acgacgtgat ggcgctggcg atccgggtca acgatttcct
     1981 gtcgggcctt ttccttggcg tcggcatccg tctcgtcgac ttcaagatgg agaccgggcg
     2041 gctttgggag ggcgacgtga tgcgcatcgt ggtcgccgac gagatctccc cggattcgtg
     2101 ccgcctgtgg gacatcaggt cgtccgataa gctcgacaag gaccgtttcc ggcgcgacct
     2161 cggcgggctg atcgaggcct actcggaggt tgcccgccgc ctcggcatcc tcggcgagaa
     2221 cgagaagccg ggcaacggcg ggccgcgcct ggtgcagtga accgtcgagc ctggatgact
     2281 gacgtaacaa tgcctggccc cgcgccaggc atttttcgtt gtgctcctgg agcgaccctg
     2341 accgaaccgc ggtgaggctg cactgcggcg ggcgagggat cgcgcgctgt cagttgcccc
     2401 agcgctcgcg ctggatttca cccgccatgc agctgccgcc gccctcgaaa acctgaaccc
     2461 gtctgatgag cggttcgggc gcataatccg cgacctcgcg gatgatcttg gtcttgatcg
     2521 cgttgacgaa ctcgtcgcgg gtgcgcaccg gcacgataaa agctcccgcg ccgccgatca
     2581 cgcactcgcg gtaatagacg tcgaggtcga ccacgtccca atagctcgac ggtcgcttga
     2641 gcatgatcgg caggccgttg atcgtgacgc cctgcgccac ggcgtcgtcc cgcgccgccg
     2701 tcaccgaccg cccctggttg ttggcgccgt cgccggaaat gtcgatcaca cgccgcgtcg
     2761 gcgtgagccc gctctcggaa tggagcctga caccgaaatc gatcgcgccg gacaccgacg
     2821 tgcgggggcc gcgccgggtt ggctgcgcgg cgaggcggcc ggcgaaggcc atcgcgcttt
     2881 ccggatcctc gatcaccgtc cagggaacga tcaccttctg ctcccagttg gcagcccatt
     2941 cgccgtaggt cacggcgatg cggccgagcg cgccgttgcg aatggcctgg tgcacgaggg
     3001 gcgagcggaa ggcctcgacg aacccggcgc gttgcaggtc ctgctcgtcg gggtccatcg
     3061 agtaggagat gtcgaccgcg atcacgaggg cgagatcgac ctcctctgcg gcggccggaa
     3121 cagcaccgac cagcgccgcc agcgccagcg ccgccgtgag cagggccgtg cgcgcgcatc
     3181 gtcggagcat gccgtcctcc cgagcggatt tcgcg
//
LOCUS       DATAIQ010000746         2347 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_408283, whole genome shotgun sequence.
ACCESSION   DATAIQ010000746 DATAIQ010000000
VERSION     DATAIQ010000746.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2347)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2347)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2347
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_408283"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1289
                     /gene="miaB"
                     /locus_tag="VHN20_12385"
     CDS             <1..1289
                     /gene="miaB"
                     /locus_tag="VHN20_12385"
                     /EC_number="2.8.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016782 - transferase activity,
                     transferring sulphur-containing groups [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HEX2726608.1"
                     /translation="APGGFCETTTIDEADVVILNTCHIREKAAEKVYSELGRVRTVKR
                     GRESEGHDVKVVVAGCVAQAEGQEIIRRAPVVDVVVGPQSYHRLPELLQRAAGGHVVD
                     TDFPVDDKFDHLPAPSRAKTASRGVSAFLTVQEGCDKFCTFCVVPYTRGAEVSRPVAK
                     ILEEAQRLAEAGVRELTVIGQNVNAFHGVGPDGADWTLGQLLHRLAAIPGVARLRYTT
                     SHPRDMDDALIAAHRDLPALMPYLHLPVQAGADRVLSAMNRRHTAASYLRIVDKVRAV
                     RPDIALSSDFIVGFPGETEADFAETLRLVDEVGFASAFSFKYSPRPGTPAAELAEQVP
                     EEVKSERLARLQERLETHRQAFNEGTVGRTVDVLLEKPGRYPGQLAGKSPYLQAVQMQ
                     GDGHAIGDIVTARITGMAANSLFGEVDGAASAPAAA"
     gene            1401..>2347
                     /locus_tag="VHN20_12390"
     CDS             1401..>2347
                     /locus_tag="VHN20_12390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HEX2726609.1"
                     /translation="MRANEEAATQRGRAAGNGHPGVEERAEITLAFDDNRLASLVFGH
                     YDQNLAHMERRLGVTANALGNHVVLKGPADATDKARHVLESLYERVRNGAALTLGDVD
                     GAIQESVLQGTLFPPVDEGPASGRPSFEQIATRKRGAVRARNAAQDAYIKALRQYELV
                     FAEGPAGTGKTWLAVGHAVALLEQGAVDRLILSRPAVEAGERLGFLPGDMREKVDPYL
                     RPIYDALYDFMEARHVERGLQTGMIEIAPLAFMRGRTLANACVILDEAQNTTSMQMKM
                     FLTRLGEGSKMVVTGDPSQIDLPGGMRSGLEEAISLLDGV"
BASE COUNT          396 a          758 c          807 g          386 t
ORIGIN      
        1 tggctcctgg aggcttttgc gaaacgacga cgatcgacga ggcggacgtc gtcatcctca
       61 atacctgtca catccgcgag aaggcggcgg aaaaggtgta ttcggagctt ggccgcgtcc
      121 gcaccgtcaa gcggggccgt gaaagcgagg gccacgacgt caaggtcgtg gttgccggct
      181 gcgtagcgca agcggagggg caggagatca tccgccgggc gccggtggtc gacgtcgtgg
      241 tggggccgca aagctatcac cgcttgccgg agctgctgca gcgcgcggcg ggcgggcatg
      301 tggtcgatac cgatttcccg gtcgacgaca agttcgatca tctgccggca ccgagccggg
      361 cgaagaccgc cagccgcggg gtgtcggcct ttctgaccgt gcaggaggga tgcgacaagt
      421 tctgcacctt ctgcgtcgtg ccctatacgc gcggcgccga ggtgtcccgt ccggtcgcga
      481 agatcctcga ggaggcgcaa cgcctcgccg aggccggcgt gcgcgagctg accgtcatcg
      541 ggcagaacgt caatgccttt catggcgttg gaccggacgg cgcggactgg accctcggcc
      601 agctcctgca tcgcctcgcc gccattcccg gggtggcgcg gctgcgctac acgacgagcc
      661 acccgcgtga catggacgac gccttgatcg cggcgcatcg cgacctgccc gcgctgatgc
      721 cgtatctgca tcttccggtg caggccgggg ccgaccgggt cctttccgcg atgaaccgcc
      781 ggcacacggc cgcttcgtac ctgcgcatcg tcgacaaggt gcgcgccgtc cgtcccgata
      841 tcgctctgtc gtcggatttc atcgtcggct tccccggaga gacggaagcc gatttcgccg
      901 agacgctgcg gctcgtcgac gaggtggggt tcgccagcgc cttttcgttc aaatacagcc
      961 cgcgcccagg tacgcccgcc gccgagcttg cggagcaggt gccggaagag gtcaagtcag
     1021 agcggctggc gcgcctgcag gagcgcctcg agacccatcg ccaggcgttc aacgagggaa
     1081 ccgtcggccg gaccgtcgac gttctcttgg agaaaccggg ccggtacccg ggtcagctcg
     1141 caggcaagtc gccctacctt caggcggtgc agatgcaggg cgatggccac gccatcggcg
     1201 acatcgtcac cgcgcggatc acgggcatgg cagcgaacag cctgtttgga gaggtcgacg
     1261 gcgccgcatc ggcgccggcg gccgcataaa gcgggatggc ttcacgttga atccatccca
     1321 ccgtaaattt ggtttgtgtc gcatgacctt tgcgccgacg cggcatccgc ttcggcgggt
     1381 catgctttaa ggagagacgg ttgagggcca acgaagaggc tgcaacccag cgcggacgtg
     1441 cagcaggcaa cggtcatccg ggcgtcgagg agcgggcgga gatcaccctt gctttcgacg
     1501 ataaccgcct cgccagtctc gtgttcggac attacgacca gaatctcgca catatggagc
     1561 gccgcctcgg cgtcaccgcc aatgcgctcg gcaatcacgt tgtcctcaaa gggcctgcgg
     1621 acgccaccga caaggcccgc cacgttctcg agagtctcta tgaacgcgtg cgcaacgggg
     1681 cggccctgac gctcggcgac gtggacggcg ccattcagga aagcgtgctc cagggaaccc
     1741 tgtttccgcc cgtcgacgaa gggcccgcgt ccggccgccc gtccttcgag cagatcgcca
     1801 cgcgcaagcg aggcgccgtg cgggcacgca acgcggccca ggacgcgtat atcaaggcgt
     1861 tgcggcaata cgagctcgtc tttgccgaag gcccggccgg caccggcaag acatggctcg
     1921 cggttggcca tgcggtggcg cttctggaac agggcgccgt cgatcggctg atcctgtcgc
     1981 gccccgcggt ggaggccggc gagcgcctgg ggttcctgcc gggggacatg cgcgagaagg
     2041 tggatcctta tctgcggccg atctacgacg cgctctatga tttcatggaa gcgcgccacg
     2101 tcgagcgcgg gctgcagacc ggcatgatcg agatcgcgcc gctcgccttc atgcgcgggc
     2161 gcacgctggc caacgcctgc gtcatcctcg acgaggccca gaacaccacg agcatgcaga
     2221 tgaagatgtt cctcacccgt ttgggcgagg gctcgaagat ggtggtgacc ggagacccga
     2281 gccagatcga tttgccgggt ggcatgaggt cgggtctcga ggaggcgatt tcgttgctcg
     2341 acggcgt
//
LOCUS       DATAIQ010000747         2077 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_315960, whole genome shotgun sequence.
ACCESSION   DATAIQ010000747 DATAIQ010000000
VERSION     DATAIQ010000747.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2077)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2077)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2077
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_315960"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..421)
                     /locus_tag="VHN20_12395"
     CDS             complement(<1..421)
                     /locus_tag="VHN20_12395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015927100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HEX2726610.1"
                     /translation="MSRGRDFRDTRRRDFGDDFTKPGRDPYANQMPEMRPAARSGPEI
                     DAVVKWFNPQKGFGFAELSDGSGDAFLHVRAVEAAGYRELEPGTRLTVRVTQGQKGPQ
                     VTEITTVDTSTATPGGGGGGGGGGGGGAPRGGGMGGGG"
     gene            complement(686..1999)
                     /locus_tag="VHN20_12400"
     CDS             complement(686..1999)
                     /locus_tag="VHN20_12400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012454426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0030253 - protein secretion by the type I
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family type I secretion periplasmic adaptor
                     subunit"
                     /protein_id="HEX2726611.1"
                     /translation="MDTTKTSRDIRRSMRRQTVGGLVAVAALFGGFGVWAATTSLSGA
                     VIAAGQVVVETNVKKVQHPTGGVVGEIRVRDGDRVTSGDLLLRLDETVTRANLSMIAK
                     QLDQFEARNARLTAERDGLPEIKFPASLVERRDQADVADALVGERGLFEARRAATNGQ
                     KSQLTERVAQLREEIRGLDAQVTSKRQQIALINQELEGVQKLYNQNLVPITRLTTLQR
                     EASRLHGEEGQLIAQIASSKGRIAETELQIIQLGQDLRREVATEQREVQAKIGEFTER
                     KVTAEDQLKRIDIRAPQDGYVHQLAVHTIGGVINPGEPLMLIVPRADSLVVEARIAPH
                     EIDQVRAGQPVQLRFSAFNSRTTPEIMGVLSRVSADLTREQQTNIAYYTARITIADEE
                     LKKLEDRVLLPGMPVEAFMQTGSRTALSYLVKPFEDQVMRAFRER"
BASE COUNT          285 a          715 c          713 g          364 t
ORIGIN      
        1 ggccgccgcc gcccatgccg ccgccgcgcg gcgcgccgcc accaccgccg ccaccgcccc
       61 cgccaccgcc accaggggtc gcggtgctcg tgtcgacggt ggtgatctcc gtcacttgcg
      121 ggcccttctg gccctgcgtg acgcgcacgg tcaggcgcgt cccgggctcg agctcgcggt
      181 agccggccgc ctcaacggcg cggacgtgca ggaaggcatc gcccgatccg tcgctcagct
      241 cggcaaagcc gaaacctttt tgcgggttga accactttac gaccgcgtcg atctccgggc
      301 ccgaacgcgc ggcaggccgc atttcaggca tttggttcgc gtagggatca cggccaggtt
      361 tagtgaagtc gtcgccgaaa tcgcggcggc gcgtgtcacg gaagtctcgt cctcgactca
      421 tcagggaagc tcgtgtgagg ggggctatgc ggcctcaact gggaaacggg tcaagtcttc
      481 caactcttgt aattccaacg cgcgtaccgc ctgcgaccaa agccgtttga gctcttcgcc
      541 cctgtccacg cgactgccgg agcctggttg aagccagcct cagtatcgcc tgaagttcac
      601 tggaggtcca gtcaaacttc tgtgcagcat taagggccgg ccaagcgttc ccgggcacca
      661 gggcggggca gtattccccg gcctttcacc tttcccggaa ggcccgcatc acctggtcct
      721 cgaacggctt gaccagatag gagagggcgg tgcgggaccc cgtctgcatg aaggcctcga
      781 ccggcatgcc ggggaggagc accctgtctt cgagcttctt gagctcctcg tccgcgatag
      841 tgatccgggc ggtgtaatag gcgatgttgg tctgctgctc gcgggtgagg tcggccgaca
      901 cgcgcgacag gacgcccatg atctcgggcg tcgtccggct gttgaaggcg gagaagcgca
      961 gctggaccgg ctgccccgcc cgcacctggt cgatctcgtg cggcgcgatg cgcgcctcga
     1021 ccaccaggct gtcggcccgc gggacgatca gcatcagcgg ctcaccggga ttgatgacgc
     1081 cgccgatcgt gtgcaccgcg agctggtgga cgtaaccgtc ctgcggcgca cggatgtcga
     1141 tgcgcttgag ctggtcctcg gccgtgacct tgcgctccgt gaactcgccg atcttggcct
     1201 gcacctcgcg ctgttcggtg gcgacctcgc ggcgcaggtc ctgcccgagc tggatgatct
     1261 gcagctcggt ctcggcgatg cgccccttcg agctggcgat ctgggcgatc agctgcccct
     1321 cctcgccgtg caggcgcgag gcttcgcgct gcagggtggt gaggcgcgtg atcggcacga
     1381 ggttctggtt gtagagcttc tggacgccct cgagctcctg gttgatcagc gcgatctgct
     1441 ggcgtttcga ggtgacctgc gcgtcgagcc cgcggatctc ctcgcgcagc tgcgcgacgc
     1501 gctcggtgag ctgggacttc tgcccgttgg tggcggcgcg gcgcgcctcg aacagtccgc
     1561 gctcgccgac cagggcgtcg gcgacgtcgg cctggtccct ccgctcgacg aggctggccg
     1621 ggaacttgat ctcgggaagg ccgtcgcgct cggccgtcag gcgcgcgttg cgcgcctcga
     1681 actggtccag ctgcttggcg atcatcgaca ggttggcgcg cgtgaccgtc tcgtcgagcc
     1741 gaagcagaag gtcgcccgag gtgacgcggt cgccgtcgcg cacgcggatc tcgccgacga
     1801 cgccgccggt cggatgctgc accttcttga cgttcgtctc gacgaccacc tgcccggccg
     1861 cgatcacggc gccggacagg gacgtcgtcg ccgcccacac gccgaagccg ccgaacagcg
     1921 cggcgaccgc gaccaggccc cccacggtct ggcggcgcat cgagcggcgg atgtcccgcg
     1981 aagtcttggt cgtatccatc tggcctctct ggatcgtcag gatgcgtcgg ggccggcgcc
     2041 ggtggcggcg gcgcgcaacg gttgcggcat gctcgcc
//
LOCUS       DATAIQ010000748         1878 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_340182, whole genome shotgun sequence.
ACCESSION   DATAIQ010000748 DATAIQ010000000
VERSION     DATAIQ010000748.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1878)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1878)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1878
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_340182"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1706
                     /locus_tag="VHN20_12405"
     CDS             <1..1706
                     /locus_tag="VHN20_12405"
                     /inference="COORDINATES: protein motif:HMM:NF024140.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX2726612.1"
                     /translation="GLSLMLRARKLTIRTRLVAAFSLAAVMVLGLGLFGLHSLRATGG
                     LLNEVTESRFPAVQSAAALDYATARLRTSYYRLLLSDDADEMKKLEKEIAERGSDIGG
                     IRQQFDTIAISDAQREALAKFDAGWKAYLGEAAKTLEMVRQGKHKEATEHFVKKATTV
                     ARASTAALDEIKQFSHGEARKAADAGAAVYASGVKLTIVALALALTLIALCAFMIVRG
                     ISRGIASVVQPMRALAAGDLGVTIPARGQKTEIGLIADAVQVFKEGLIERRRLEDEAM
                     ERDAGEVAQKRRLLAEMAQNFERKVGGLVGQLAAAATQMEATARSMSVTADGTSTQAA
                     GVTSAAEQTSVNVQTVAAATEELTSSIREIASQVAQSTSMSGRAVEDAKRTDGIVQAL
                     AAGAEKIGDVVALINTIAGQTNLLALNATIEAARAGEAGKGFAVVASEVKSLAAQTAR
                     ATEEISAQVASIQSETQQAVAAIQSIGKTIDEMSAISGAVAAAVEEQGAATQEIARNV
                     HEASQGTQLVTGKIVDVNRGASETGAAAAQVLAAAQELARNAASLGVQVDEFLASVKA
                     A"
BASE COUNT          306 a          634 c          677 g          261 t
ORIGIN      
        1 aaggcctttc gctcatgctc cgtgcccgca agctcaccat ccgcacgcgg ctcgtcgccg
       61 ctttttcgct cgcggctgtg atggtgctcg ggctcggatt gttcgggctg cacagcttgc
      121 gtgccaccgg tgggctgctc aacgaggtga ccgagagccg tttcccggcc gtgcagtccg
      181 ccgccgccct cgactacgcc acggcccgcc tgcggaccag ctattaccgg ctcctgctct
      241 cggatgacgc ggacgagatg aagaagctcg agaaggagat cgccgagcgc ggcagcgaca
      301 ttggcggcat ccgccagcaa ttcgacacga tcgccatctc cgacgcgcag cgcgaggctc
      361 tggcgaaatt tgacgcgggc tggaaggcgt atctgggcga ggcggcgaag accctggaga
      421 tggtccgtca gggcaaacac aaggaggcca ccgagcattt cgtcaagaag gcgaccacgg
      481 tcgcccgcgc ctcgacggcg gccctcgacg agatcaagca gttcagccac ggggaggcgc
      541 gcaaggcggc cgatgccggc gccgccgtct acgcgtccgg cgtcaagctg accatcgttg
      601 ccctcgcttt ggcgctcacg ctgatcgcgt tgtgcgcctt catgatcgtg cgcggcatct
      661 cgcggggcat cgcctctgtt gtgcagccga tgcgggcgct ggcggcgggc gatctcgggg
      721 tgacgattcc ggcgcgtggc cagaagaccg agatcggcct gatcgccgac gccgtgcagg
      781 tgttcaagga aggcctaatc gagcgccgcc gcctcgagga cgaggccatg gagcgcgacg
      841 ccggcgaggt cgcgcagaag cgccggctgc tcgccgagat ggcgcagaat ttcgagcgca
      901 aggtcggcgg cctcgtcggt cagctggccg ccgcggctac gcagatggaa gcgacggcgc
      961 ggtcgatgtc ggtcacggcc gatggcacca gcacgcaggc ggccggcgtc acgagcgccg
     1021 ccgagcagac ctcggtcaac gtgcagaccg tggcggccgc gaccgaggag ctgacctcct
     1081 cgatccgcga gatcgccagc caggtggcgc agtcgacgag catgtcgggg cgcgccgtcg
     1141 aggacgccaa gcgcaccgac ggcatcgtgc aggcgctcgc cgccggcgcc gagaagatcg
     1201 gcgacgtggt ggcgctgatc aacaccatcg ccggccagac caaccttctc gcgctcaacg
     1261 ccaccatcga ggcggcgcgc gccggcgagg cgggcaaggg ctttgcggtt gtggcgagcg
     1321 aggtcaagtc gctcgccgcg cagacggcgc gcgctacgga agagatctcg gcgcaggtgg
     1381 cgtcgatcca gtcggagacg cagcaggcgg ttgccgccat ccagagcatc ggcaagacga
     1441 tcgacgagat gagcgccatc tcgggtgcgg tcgcggctgc ggtcgaggag cagggagcgg
     1501 caacgcagga gatcgcccgc aacgttcacg aggcctcgca gggcacgcag ctggtgacgg
     1561 gcaagatcgt cgacgtcaac cgcggtgcca gcgagaccgg cgccgctgcc gcgcaggtgc
     1621 tggcggccgc gcaggagctt gcccgcaacg ccgcatcact cggcgtccag gtcgacgagt
     1681 tcctcgccag cgtgaaggcc gcatgatccc aacccctctc cccgcttgcg gggagaggtc
     1741 gagcggcgag cggcagcgag ccgaccgggt gagggggcct cgccgggtcg agcactgccg
     1801 gatgcgcccc ctcacccggt ctgcggagtt tatcgtcggg cgggccttcg gcccgacccg
     1861 atggcgactc gcctctcc
//
LOCUS       DATAIQ010000749         5448 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_316024, whole genome shotgun sequence.
ACCESSION   DATAIQ010000749 DATAIQ010000000
VERSION     DATAIQ010000749.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 5448)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5448)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5448
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_316024"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..159)
                     /locus_tag="VHN20_12410"
     CDS             complement(<1..159)
                     /locus_tag="VHN20_12410"
                     /inference="COORDINATES: protein motif:HMM:NF024313.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX2726613.1"
                     /translation="MAVQSAVDAAAPGPAPRSLWADAGARIMRNRAALAGFAVLVLIV
                     VACLVGPSL"
     gene            complement(159..1079)
                     /locus_tag="VHN20_12415"
     CDS             complement(159..1079)
                     /locus_tag="VHN20_12415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019962786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX2726614.1"
                     /translation="MLAFVLRRLLVAVPTLFAVITISFFLIRVAPGGPFDLERPLEAK
                     VMENLNRIYKLDRPLAEQYASYLGALARGDFGPSFYMRDFSVADLFAAGLPVSMLLGA
                     LALTSALAIGGAIGCIAAIRQNSAVDYAATAVGAAGITVPNFVVAPLLQILFGLTLAW
                     LPVAGWGGGSWRNLVLPVLTLALPQIAVIARLSRASMIEALRSNHIRTLRALGLPAGV
                     VVRHAIRSAALPVVSYLGPAAAALLTGSVVIETIFGLPGVGRYFVEGALNRDYTLVMG
                     TVVMVSVFVLVFNLVVDVLYAVIDPRVRLT"
     gene            complement(1122..2708)
                     /locus_tag="VHN20_12420"
     CDS             complement(1122..2708)
                     /locus_tag="VHN20_12420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter substrate-binding
                     protein"
                     /protein_id="HEX2726615.1"
                     /translation="MAHMILRTAMAAMTAIALTVAAAAEVVYNRGNDGDPETLDPHKT
                     SSVVESNILRDLLEGVVIYNAKAEIVPGAAESWTVSPDGRTYTFKLRADGRWSNGDPV
                     KAEDFVFSYRRIMSAETGAKYANILYPILNGEKVHKGTGKPEELGVKAVDDRTLEITL
                     ERPTPYFLELLTHQTSLPVHPGSAAKFGKDFVKPGNYVSNGAYLLAENVPNSHIRLTR
                     NPRFYDAGNVQIDTVNFYPSPNLATAVRRYQAGELDSLSDLPADQIKSLKERFGAQVV
                     LGPYLGTWVLVVNTSKAPFNDARVRHALSMVIDREFIASEIWGETMQPAYSFVPPGTN
                     NYREPAVLDYRELSPIDREERAKALLKDAGFGPGKPLKVEIRYNTTDNNRNTVVALAQ
                     QWKPLNVETSFINTDLKTHFAHLRDGGDFDLGRYGWIGDYSDPQNFLFLVESDNKGFN
                     YGKYNNPEYDALMRQSAGEMDLNKRADILFKAEQIFLRDLPWIPVMHYGTKNLISPKL
                     KGFHQNLRGVYPTRFLTITR"
     gene            2957..3358
                     /locus_tag="VHN20_12425"
     CDS             2957..3358
                     /locus_tag="VHN20_12425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726616.1"
                     /translation="MPSFKWGTFAKLGTAIMGLAALFTADARAATEPTGTPKDGVVPS
                     RLGIGEVLVCRDGHKLYISENGVSFEELTLDDTDDGVRLSRLLNEMKIGADPVAISVG
                     RVIVADGGSSINAPRQAGRSDRADENRTRSK"
     gene            3401..4657
                     /locus_tag="VHN20_12430"
     CDS             3401..4657
                     /locus_tag="VHN20_12430"
                     /inference="COORDINATES: protein motif:HMM:TIGR00702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcaO-like family protein"
                     /protein_id="HEX2726617.1"
                     /translation="MRAAAESWGMHFETPVPKRFRHGPHRTAPPDETLARYRQAAPHM
                     GITRLGNVTGLDCIGIPVAVAVRPNSRSISVSQGKGATLTHALASALMEAIEGFHAED
                     LDARFRMASARELASAACVADHKRLSRGGQPLPGDVPIPWIEGIELLSGEACWVPGEA
                     VHLDMTLPARPGSGYFLASSNGLASGNHLLEALSAGICEVVERDAVALWIAETLASQG
                     ARRLDLGSIDAPDCRRFLDAYDRAGMAVRVWNVTSDVGIAAFVCDIFPRAEDPLADLP
                     RFRGAGCHPSRDIALTRALSEAAQVRLTHIAGIRDDLPKSEYTRHAAEKLGAALLDYR
                     SRHASACAFQAVPSFESDDFVVEVQWQLERLRQVGAQQVIVVDLTRAEYGIPVVKVVV
                     PALEGNASHPDYSPGPRAEAVHGGPP"
     gene            4654..5391
                     /locus_tag="VHN20_12435"
     CDS             4654..5391
                     /locus_tag="VHN20_12435"
                     /inference="COORDINATES: protein motif:HMM:NF019429.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TfuA-like protein"
                     /protein_id="HEX2726618.1"
                     /translation="MRAIVFAGPSLPPDARPAVTDIAWRPPVRQGDVHRAALSRPDAI
                     GIIDGFFEVTPTVWHKEILWAMAQGIHVYGSASIGALRAAELHTFGMKGVGRVYELFR
                     DGVLQDDDEVAVLHGPEALGYVGLTEAMVNVRVTVEVAVRRGVVEAATAADVISAAKS
                     LFYKSRTYDAIMQALAKAGVTDVGRIGPWLSVDRVDQKRADALAMIAQMRAELASAVA
                     PFRPAYRFAHTIAWEESVRRSGEPPRP"
BASE COUNT          948 a         1743 c         1860 g          897 t
ORIGIN      
        1 cagggacgga ccgaccaggc acgcgacgac gatcagcacg agcacggcga acccggccag
       61 cgcggcgcga ttacgcatga tcctggcgcc cgcatccgcc cacaaagagc gcggggccgg
      121 cccgggagcg gccgcgtcga cggcgctctg tacggccatc acgtcaaccg cacgcgcggg
      181 tcgatcacgg cgtagagcac gtcgacgacc agattgaaca cgagcacgaa caccgacacc
      241 atcacgacgg tgcccatcac cagcgtgtag tcgcggttga gggcgccctc gacgaagtag
      301 cgtccaaccc cgggcaggcc gaaaatcgtt tcgatcacca cggagcccgt cagcagggcg
      361 gcggcagccg gaccgagata cgagaccacc ggcagagcgg cactgcggat ggcgtgccgc
      421 acgaccacgc cggcgggaag gccgagcgcg cgcaaggtgc ggatgtggtt ggagcgcagc
      481 gcctcgatca tcgacgcgcg gctcaggcgc gcgatgacgg cgatctgcgg cagcgccagc
      541 gtcagcaccg gaagcacgag attgcgccat gatcctccgc cccagcccgc gacgggcagc
      601 caggcgagcg tcagcccgaa caggatctgc agcaacggcg cgacgacgaa gttcgggacc
      661 gtgattcccg cggcgccgac ggcggtggct gcataatcga cggcgctgtt ctgccggatc
      721 gccgcgatgc agccgatggc gccgccgatc gccagcgcac tggtcaacgc cagggcgccg
      781 agcaacatcg acacgggaag gccggccgca aacaggtcgg caaccgaaaa gtcgcgcatg
      841 tagaacgaag gcccgaagtc accgcgggcg agggcgccta gatacgatgc atattgctcg
      901 gccagagggc ggtcgagctt gtagatacgg ttcaggttct ccatgacctt ggcctcgagg
      961 ggacgctcga gatcgaacgg tccccccggc gcgacgcgga tcaggaagaa cgagatcgtg
     1021 atcaccgcga aaagcgtcgg cacggcgaca agcaggcggc gcaggacgaa agccaacatg
     1081 cgctgcccct ctcccagctt gccgagatgc ctccgcgggc ctcagcgggt gatcgtgagg
     1141 aaacgcgtcg gatacacacc ccgcaggttc tgatggaagc ctttcagctt cggcgagatc
     1201 aggttcttgg tcccgtaatg catgacgggg atccagggca aatcgcgcag gaagatctgc
     1261 tcggccttga acaggatgtc ggcacgcttg ttcaggtcca tctcgcccgc cgattgccgc
     1321 atcagcgcgt catattcggg gttgttgtac ttgccgtagt tgaagccctt gttgtcgctc
     1381 tcgacgagga acaggaagtt ctgcggatcg gaatagtcgc cgatccagcc gtagcgcccg
     1441 aggtcgaagt caccgccgtc gcgcaaatgg gcgaagtgcg tcttcaagtc cgtgttgatg
     1501 aacgaggtct cgacgttcag cggcttccac tgctgcgcca gcgccaccac cgtgttgcgg
     1561 ttgttgtcgg tcgtgttgta gcggatttcc accttgagcg gcttgccggg gccgaagccg
     1621 gcgtccttga gaagcgcctt ggcccgctct tcccgatcga tcggcgacag ctcgcgataa
     1681 tcgagcacgg cgggctcgcg ataattgttg gtcccgggcg gcacgaacga gtaggccggc
     1741 tgcatcgtct cgccccagat ttcgctggcg atgaactcgc ggtcgatcac catcgacagc
     1801 gcgtgccgca cgcgcgcatc gttgaagggc gccttcgacg tgttcacgac caagacccag
     1861 gtgccgagat agggcccgag gacgacctgg gcgccgaacc gctccttgag cgacttgatc
     1921 tggtcggcgg gaaggtcgct cagcgagtcg agctcgcccg cctggtagcg gcgcacggcc
     1981 gtggcgaggt tcgggctcgg gtagaaattg accgtgtcga tctggacgtt cccggcgtcg
     2041 tagaaacgcg ggttcctggt cagcctgatg tgcgaattgg gaacgttctc ggcgaggagg
     2101 taggcgccgt tcgagacgta gttgcccggc ttcacgaagt ccttgccgaa cttcgccgcc
     2161 gagccgggat ggacgggcag gctggtctgg tgcgtgagca gttcgaggaa atagggcgtc
     2221 ggccgctcga gggtgatttc gagggtgcga tcgtcgacag ccttgacgcc cagctcctcc
     2281 ggcttgcccg ttcccttatg gaccttctcg ccattcagaa tggggtaaag aatgttggca
     2341 tatttggcgc cggtctccgc gctcatgatg cggcggtagg aaaagacgaa atcctcggcc
     2401 ttgacgggat cgccattgga ccagcgccca tcggcccgca atttgaacgt gtacgtgcgc
     2461 ccgtcgggcg aaaccgtcca gctttcggcc gcgccgggca cgatttcggc cttggcattg
     2521 tagatcacga caccttcgag gaggtcgcgc aggatgttgg attcgacaac cgacgacgtc
     2581 ttgtgcgggt ccagggtctc cgggtcgccg tcgttgccgc ggttatagac cacctcggcg
     2641 gcggccgcga ccgtgagggc gatggccgtc attgccgcca tcgcggtgcg taggatcatg
     2701 tgagccattg ccttctccga tggtcgaaat gctgcgcgga gcttccgtcg atgtgggcgg
     2761 tttttcaatc ccttgcacac cgtccggggg cgccagaccg cattttcttg catgggcccc
     2821 gggctcttct gtccccgggg atctggacca aaaccgcgcc ccgcccggcg ggctcaagcc
     2881 tagcggcttg ctgggccttg ctttttcgtt ctaggctggg atggcgccgc gacggcgtgg
     2941 agcttcggag agcgatatgc cgagtttcaa gtgggggacg ttcgcaaagc ttggcactgc
     3001 aatcatgggt ctggcggcgc tgttcacagc cgacgcgcgg gcggcgacag agccgacggg
     3061 gacgcccaag gacggagtcg tcccgtcccg cctgggaatc ggcgaggtcc tcgtgtgccg
     3121 cgacggacat aagctgtaca tttccgaaaa cggagtgtcg ttcgaggagc tgaccctcga
     3181 cgacacggac gacggcgtgc gcctgagcag gctgctcaac gagatgaaga tcggcgcgga
     3241 cccggtcgcc atatccgttg gccgcgtcat cgtcgccgac ggcggctcga gcatcaacgc
     3301 tccgaggcaa gcgggacgct cggatcgagc cgacgagaac cgaacccgct ccaagtgacg
     3361 cgggcggcgt ttcgccgtgg cgcgcgccgg agcatgagcc gtgcgcgctg ccgccgagtc
     3421 gtggggcatg catttcgaga cgccggtccc caaaagattc aggcacgggc cgcatagaac
     3481 ggcgccgccg gacgagaccc tggcccgcta ccggcaggcg gcgccgcata tgggcatcac
     3541 ccggctgggc aacgtcaccg gcctggactg catcggcatt cccgtggcgg tcgccgtgcg
     3601 gccgaactcg cgttcaattt ccgtctcgca agggaaaggg gcgacgctca cgcacgcgct
     3661 ggcatccgcg ctgatggaag ccatcgaggg tttccacgcc gaagatctgg atgcgcgctt
     3721 cagaatggcg agcgcgcgcg agctggcatc agcggcttgc gtcgccgatc acaagcgtct
     3781 ctcccgcggc ggacagccgc tgccgggtga cgtgccgatt ccgtggatcg aagggatcga
     3841 gctgttgtcg ggtgaagcgt gctgggtgcc cggggaggcg gtccacctcg acatgacgtt
     3901 gcccgccagg ccgggcagcg gctatttcct ggcctcgtcg aacggcctcg cctccggcaa
     3961 tcacctgctc gaagcgctca gcgccggcat ttgcgaagtg gtcgagcgcg acgccgtcgc
     4021 gctctggata gccgagacgc ttgcaagcca aggcgcgcgc cgcctcgacc tcggttcgat
     4081 cgacgccccc gattgccggc gctttctcga tgcctacgac agggcgggaa tggcggtccg
     4141 ggtctggaac gtcacgtcgg acgtcggcat tgccgccttc gtctgcgata ttttccctcg
     4201 cgcggaagac cctttggccg acctgccgcg cttccgcggc gcgggatgcc atccaagccg
     4261 cgacatcgcg ctcacgcgtg cgctcagcga ggctgcgcaa gtgcgcctca cgcatatcgc
     4321 cggcatccgc gacgatctgc cgaagtccga atacacgcgg cacgcggccg aaaagctcgg
     4381 cgccgcgttg ctcgactaca ggtcgcggca cgcaagcgcg tgcgcgttcc aagcagtccc
     4441 cagcttcgaa agcgacgact tcgtcgtgga ggtccagtgg cagctggaac gcttgcggca
     4501 agtgggagcg caacaagtca ttgtcgtcga cctgaccagg gcggaatacg gaatccccgt
     4561 cgtcaaggtc gtcgttccgg ccctcgaggg caatgccagc catcccgact atagccccgg
     4621 cccgcgcgcc gaagcggtgc atggcggacc gccatgagag cgatcgtctt cgccggccct
     4681 tcattgccac cggacgcgag gcctgcggtc actgacatcg cgtggcgccc gcccgtgcgg
     4741 cagggcgacg tccatcgcgc ggcgctgtca cgccctgatg ccatcgggat catcgacgga
     4801 ttcttcgagg tgacaccgac ggtctggcac aaggagatcc tgtgggcgat ggcgcaggga
     4861 atccacgtct acggctcggc cagcatcggc gccttgcgcg cggccgagct ccacacgttc
     4921 ggcatgaaag gggtggggcg cgtttacgag ttgtttcgcg acggcgtgct gcaggacgac
     4981 gacgaggtcg cggtgctgca cgggccggaa gcgctcggct atgtcggcct gaccgaggcg
     5041 atggtcaatg tgcgcgtgac ggtcgaggtg gcggtgcgta ggggtgtcgt cgaagcggcg
     5101 actgccgccg acgtgatcag cgctgcgaaa tcgctgttct acaagagccg cacctacgac
     5161 gcgatcatgc aggccctggc gaaagccggc gtgactgatg tcggacgcat cgggccctgg
     5221 ctgagcgtcg acagggtcga ccagaaacgc gctgatgcac tggccatgat cgcgcagatg
     5281 cgagcggagc tggcgtccgc ggtcgcgccg ttccggccgg cttaccggtt cgcgcatacc
     5341 atcgcatggg aggagagcgt caggcgatcg ggtgagccgc ctcgcccatg accggaacgg
     5401 cagaccgctt gcccgcccag ccaaaccgtc gtcgctcccc aacccccg
//
LOCUS       DATAIQ010000750         2677 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_38697, whole genome shotgun sequence.
ACCESSION   DATAIQ010000750 DATAIQ010000000
VERSION     DATAIQ010000750.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2677)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2677)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2677
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_38697"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(36..1148)
                     /gene="aroC"
                     /locus_tag="VHN20_12440"
     CDS             complement(36..1148)
                     /gene="aroC"
                     /locus_tag="VHN20_12440"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004107 - chorismate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HEX2726619.1"
                     /translation="MSHNTFGHLFRVTTFGESHGPALGCVVDGCPPGIPLEAAEIQAD
                     LDKRRPGQSRFTTQRREPDAVRILSGVFTDEGGRQVTTGTPIGLLIENVDQRSKDYSD
                     IKDKYRPGHADYTYDVKYGLRDYRGGGRSSARETAARVAAGAIARKIVPGMNVRGALV
                     KMGPHAIDRAGWDWDEVARNDFFCPDAKAAALFAEYLDGLRKQGSSIGAVIEVVAEGV
                     PPGLGAPVYGKLDADLAGALMSINAVKGVEIGAGFGAAELRGEENADEMRPGNAGAPS
                     FLSNHAGGILGGISTGQPVVCRFAVKPTSSILTPRQTVTRYGEATDIATKGRHDPCVG
                     IRAVPVGEAMVACVIADHYLRDRGQVGEGVSWPFAR"
     gene            complement(1316..>2677)
                     /locus_tag="VHN20_12445"
     CDS             complement(1316..>2677)
                     /locus_tag="VHN20_12445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015824137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide synthetase"
                     /protein_id="HEX2726620.1"
                     /translation="FYLFDQIDDYLSDITDINYHYYLPLITWPTALLMTAGTVLLIAL
                     VRWLVLPRVTSGSYSIWSGFYLRKWTVALATEVTLDTLTSLFATIYMRAWYRLMGARI
                     GKGAEISTNLAGRYDLTTIGAKNFIADEVVFGDEDIRRGWMHLEPVRTADRVFVGNDA
                     VVPPGADIPEDVLIGIKSKPPENARIAPGETWFGSPPIKLPNRQKVDIGATWTYEPSF
                     GRKLWRAVFEALHTSFPSMLFITFAIMTIDLFFYPAILERNWGMLVLSFMGASIVIPL
                     LQTMVVVAVKWSLMGVYKPVMKPMWSWWAMRTEAVAVLYWGLAGKVLLEHLQGTPFLP
                     WILRLLGVKLGKGICMHTTDITEFDCVKVGDFCAINALSALQTHLYEDRVMKVGRVEL
                     GRGVTIGANATVLYDTHIGDFAQLRPLTIVMKGEAIPRHSEWEGAPAVPVVHAAPALA
                     KAA"
BASE COUNT          445 a          884 c          916 g          432 t
ORIGIN      
        1 agacgacgcc tggcatcgac gccgccggat cgcgcctatc gcgcgaacgg ccagctgacg
       61 ccttcgccga cctggccgcg gtcgcgcagg tagtgatcgg cgatgacgca ggccaccatg
      121 gcttccccga ccggcacggc gcggatgccg acgcacggat cgtggcggcc cttggtggcg
      181 atgtcggtgg cctcgccgta gcgcgtgacc gtctggcgcg gcgtcaggat cgacgaggtc
      241 ggcttcacgg cgaagcggca gacgaccggc tgccccgtcg agatgccgcc gaggatgccg
      301 ccggcgtggt tggacaggaa gctcggtgcg ccggcattgc cgggccgcat ctcgtcggca
      361 ttctcctcgc cgcgcaattc cgcggccccg aacccggcgc cgatctcgac gcccttgacg
      421 gcgttgatcg acatgagggc gccggcgagg tcggcatcga gcttgccgta gaccggcgcg
      481 ccgagtcccg gcggcacgcc ctcggcgacg acctcgatca cggcgccgat cgacgagccc
      541 tgcttgcgca gcccgtcgag atactcggcg aacaacgccg cagccttcgc gtcggggcag
      601 aagaaatcgt tgcgcgcgac ctcgtcccag tcccagccgg cgcggtcgat ggcatgcggc
      661 cccatcttca ccagcgcgcc gcgcacattc atgccgggca cgatcttgcg tgcgatggcg
      721 ccggccgcca cgcgcgcggc cgtctcgcgc gccgacgagc gcccgccgcc gcgatagtcg
      781 cgcaggccgt atttgacgtc gtaggtgtag tcggcgtggc ccggacggta tttgtccttg
      841 atgtccgagt agtccttcga gcgctggtcg acattctcga tcaggagccc gatcggcgtt
      901 cccgtcgtga cctgccggcc gccctcgtcg gtgaacacgc ccgagaggat gcgcacggcg
      961 tcgggctcgc gccgctgtgt ggtgaagcgc gactggccgg ggcggcgctt gtcgagatcg
     1021 gcctggatct ccgcggcttc gagcggaatg ccgggcggac agccgtcgac cacgcagccc
     1081 agcgccggcc cgtggctctc gccgaaggtc gtgacgcgga acaggtggcc gaacgtgttg
     1141 tgggacatgg cggcgtccta gagcacgatc gattcagtcg aatcgatcat gctcccttct
     1201 ctttgtgtca catgatctgt cggcaaagcg gaatccaccc ccggatcaag tccggggaca
     1261 ggctttgtcg gatcatgctc tacgggcaaa gcgccgggct gtcaccttcg atcggtcagg
     1321 ccgccttggc gagggcaggg gcggcatgca cgacgggcac cgccggcgcg ccttcccact
     1381 ccgagtggcg cgggatggcc tcgcccttca tgacgatggt gagcggccgc agctgggcga
     1441 aatcgccgat atgcgtgtcg tagagcacgg tggcgttggc gccgatcgtg acgccgcgcc
     1501 cgagctcgac ccgccccacc ttcatgacgc ggtcctcgta gaggtgcgtc tgcaaggccg
     1561 agagcgcgtt gatggcgcag aaatcgccga ccttaacgca gtcgaactcg gtgatgtcgg
     1621 tcgtgtgcat gcagatgccc ttgccgagct tgacgcccag caggcgcagg atccagggca
     1681 ggaacggcgt gccttgcaga tgctcgagca gcaccttgcc ggcgaggccc cagtagagca
     1741 ccgcgaccgc ctcggtgcgc atcgcccacc atgaccacat cggcttcatg acaggcttgt
     1801 agacgcccat caggctccac ttgaccgcga ccacgaccat cgtctgcagc agcgggatga
     1861 cgatgctcgc gcccatgaag ctgagcacga gcatgcccca gttccgttcc aggatcgccg
     1921 gatagaagaa gaggtcgatc gtcatgatgg cgaaggtgat gaacagcatc gacgggaacg
     1981 aggtgtgcag cgcctcgaac accgcccgcc acagcttgcg cccgaaggac ggctcgtagg
     2041 tccaggtggc gccgatgtcg accttctggc ggttcggcag cttgatcggc ggcgagccga
     2101 accaggtctc gccaggcgcg atgcgcgcgt tctcgggcgg cttcgacttg atgccgatca
     2161 gcacgtcctc ggggatgtcg gcgccgggcg gcacgaccgc atcgttgccg acgaagacgc
     2221 ggtcggcggt gcgcaccggc tcgagatgca tccagccgcg gcggatgtcc tcgtcgccga
     2281 acaccacctc gtcggcgatg aagttcttgg cgccgatggt cgtcaggtca tagcggccgg
     2341 cgaggttggt ggagatctcc gcgcccttgc cgatgcgcgc gcccatgagc ctgtaccagg
     2401 cgcgcatgta gatcgtggca aacagcgatg tcagcgtgtc gagcgtcacc tcggtcgcca
     2461 gcgcgacggt ccacttgcgc aggtagaagc cgctccagat cgagtagcta cccgacgtca
     2521 cccgcggcag gacgagccac cgcacaagag cgatgaggag cacggtgcca gccgtcatga
     2581 gcaaggccgt cggccacgtg atcagcggca gataatagtg atagttgatg tcggtgatgt
     2641 ccgagagata atcgtcgatc tggtcgaaca gataaaa
//
LOCUS       DATAIQ010000751         2363 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_408520, whole genome shotgun sequence.
ACCESSION   DATAIQ010000751 DATAIQ010000000
VERSION     DATAIQ010000751.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2363)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2363)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2363
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_408520"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            47..526
                     /locus_tag="VHN20_12450"
     CDS             47..526
                     /locus_tag="VHN20_12450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017484670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="host attachment protein"
                     /protein_id="HEX2726621.1"
                     /translation="MKKGLTIAHNGWVVVGDGRTALLLSNQGDEVYPNLQVQQVLEAP
                     PNPPTHEQGTDQPPRAVFGGRRSAIAQTDWHELAEQRFAGDVAEALEKVHRTTPIKAL
                     IVVAPPRTLSNFRQAFSDNLKRSIVAEVDKDLTKHPLSEIERLLTRRDNRGKGANGR"
     gene            516..1391
                     /gene="cysQ"
                     /locus_tag="VHN20_12455"
     CDS             516..1391
                     /gene="cysQ"
                     /locus_tag="VHN20_12455"
                     /EC_number="3.1.3.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR01331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008441 - 3'(2'),5'-bisphosphate
                     nucleotidase activity [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3'(2'),5'-bisphosphate nucleotidase CysQ"
                     /protein_id="HEX2726622.1"
                     /translation="MADDALSLCLAQIAVAAGEPVADIYTHGCRTHYKADASPVTNAD
                     LAAERVILEQLAVAFPNTPVVAEECVSAGRVPPIAPRFFLVDPLDGTREFVAGRTEFT
                     VNIALIEDRRPVAGAIYAPLLQRLWFASAAAFTAGVAPGGDVSDLGGRRRISVREAPS
                     QGLVALVSRSHDDPETEAWLAPLRVIERRPMGSSLKFCWIAEGLADVYPRLGETREWD
                     TAAGHAILAAAGGDVTALDGRPLGYGDVGCGFRRAGFVAVGGVRLGEGSALITPRAEA
                     MSGAFPELSPGSAPR"
     gene            complement(1324..>2363)
                     /locus_tag="VHN20_12460"
     CDS             complement(1324..>2363)
                     /locus_tag="VHN20_12460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012631267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX2726623.1"
                     /translation="NEQALRPTSLMSAEELDAFAQEFRRALARHAERLEARRAAGKVK
                     RCHGDLILRNICLLDGVPTPFDCIEFDETLATIDVLYDLAFLLMDLWHREQRRLANLV
                     LNRYLDECDESDGLALVPFFMAARAAVRAHVTASQASETPVQAATPLRSEARAYFDAA
                     LAFLRPGKTQLVAIGGLSGTGKSTVAAHLAADIGAPPGARILSSDRLRKRLHGVPAET
                     RLPESAYLPEVSEAVYGTLRQEAARALTAGSSVIVDAVFDRPAERAAIEATAAQAGVA
                     FQGIWLDAPTTTLLARIEARRNDPSDATTDVLHAQLARDCGAITWRRISAELNPATIR
                     ETLLTSLPPAA"
BASE COUNT          404 a          776 c          800 g          383 t
ORIGIN      
        1 gataggggca accagctacc cgtcttgctg aaaaaggaga gcgaccatga agaaaggact
       61 caccatcgca cataatggat gggtcgtggt cggcgacggc cgcacggcgc tcctgctcag
      121 caaccagggc gacgaagtct atcccaacct gcaggtccag caggtcctcg aggcgccgcc
      181 caatcccccg actcacgagc agggaaccga ccagccgccg cgcgcagtct tcggcgggcg
      241 gcgaagtgcg atcgcgcaga ccgactggca tgaactcgcc gagcagcgct ttgccgggga
      301 cgtggcggaa gcgctcgaga aggtgcatcg aaccaccccg atcaaggctc tgatcgtcgt
      361 ggcacccccg cgcacgttat ccaatttcag gcaggcgttt tcagacaacc tcaagcgcag
      421 catcgttgcc gaagtcgaca aggatctcac caagcatcca ctgtccgaaa tcgagcgcct
      481 tctcacccgg cgtgacaatc gcgggaaggg cgccaatggc cgatgacgcc ctctccctct
      541 gcctggccca gatcgccgtc gcggcgggcg agcccgtggc agacatctat acccatggct
      601 gtaggacgca ttacaaggcg gatgcgtcgc cggtcacaaa cgcggacctt gccgcagagc
      661 gagtgatcct ggagcaactg gcggtcgctt tcccgaacac tccggtcgtg gcggaggaat
      721 gcgtcagcgc cgggcgcgtc ccgccgatcg cgccgcgctt cttcctcgtc gatccgctcg
      781 acggcacgcg cgaatttgtc gccggacgca cggagttcac ggtaaacatc gccttgatcg
      841 aggatcggcg ccccgtcgca ggcgccatct acgcgccgct gctgcagcgt ttgtggttcg
      901 cgagcgccgc cgccttcacc gccggcgtag ctccaggtgg cgacgtcagc gacctgggcg
      961 gacgccggcg cataagcgtg cgtgaagccc cgtcccaagg gctcgtcgcg ctcgtcagcc
     1021 gctcccatga tgatcccgaa acggaagctt ggcttgcgcc gttgcgagtg atcgagcgtc
     1081 ggcctatggg atcgtcgctc aagttctgct ggatcgccga agggctggca gacgtttatc
     1141 cgcgcctcgg cgagacgcgc gagtgggaca cggcggccgg ccacgctatc ctcgctgctg
     1201 cgggcggtga cgtgaccgcg ctggacggcc gtccactcgg ctatggcgac gtcggttgcg
     1261 gatttcgccg cgccggtttc gtggcggtgg gcggcgtgcg gttgggcgag ggctccgcgc
     1321 tcatcacgcc gcgggcggaa gcgatgtcag gagcgtttcc cgaattgtcg ccgggttcag
     1381 ctccgcgctg atgcgacgcc atgtgatggc gccgcagtcg cgcgcgagct gcgcgtgaag
     1441 cacatcagtc gtggcatccg acgggtcgtt gcggcgggcc tcgattcgcg ccagcaatgt
     1501 cgtcgtgggg gcatcgagcc agatcccctg gaaggctact ccggcctgag cggcagttgc
     1561 ctcaatggcc gcccgctcgg caggccggtc gaaaaccgcg tcaacgatga cgctgctccc
     1621 cgccgtgagc gcacgcgctg cctcttgccg tagggtgccg tagacggcct cggaaacctc
     1681 cggcagatac gccgattccg gtaagcgcgt ctcggccggc acgccgtgca gccgtttgcg
     1741 gaggcggtcg ctgctgagaa tgcgcgcgcc ggggggcgcg ccgatatcgg cggcgagatg
     1801 cgctgcgacg gtcgacttgc ccgttccact cagccccccg atggcgacaa gttgcgtttt
     1861 ccccggacgg aggaaggcga gcgccgcatc gaaatacgcg cgggcttcag aacgcagcgg
     1921 ggtggctgcc tgcaccggtg tctcgctggc ctgggacgcc gtgacgtgag cacgcaccgc
     1981 ggcgcgagcc gccatgaaga agggcacgag cgcaaggccg tcgctctcgt cgcactcgtc
     2041 gaggtagcgg ttcagcacga ggttggcgag ccgacgctgc tcgcggtgcc acaagtccat
     2101 cagcaaaaag gcaagatcgt acaacacatc gatggtggcg agcgtctcat cgaactcgat
     2161 gcagtcgaat ggtgtcggaa cgccgtccag gagacagatg ttgcgcagga tgagatcgcc
     2221 gtggcaacgt ttgaccttgc cggccgcgcg ccgtgcctcg aggcgctcgg catgccgcgc
     2281 cagtgcccga cgaaattcct gtgcgaacgc gtccagctcc tccgcggaca taagggaggt
     2341 ggggcgcaac gcctgttcgt tga
//
LOCUS       DATAIQ010000752         1603 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_131832, whole genome shotgun sequence.
ACCESSION   DATAIQ010000752 DATAIQ010000000
VERSION     DATAIQ010000752.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1603)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1603)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1603
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_131832"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1141)
                     /locus_tag="VHN20_12465"
     CDS             complement(<1..1141)
                     /locus_tag="VHN20_12465"
                     /inference="COORDINATES: protein motif:HMM:TIGR00976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HEX2726624.1"
                     /translation="MSLVVLTSSLIAAHLPAQSTAAPYDAVLAGENVMVPMRDGKRMA
                     TDVYRPARNGAPVNEPLPVLLQRTPYDKTTQRRDAEWFARHGYVVAVQDARGRFKSEG
                     TFLKVQPADATDGYDTIEWLAKQPFSNGKVGMWGTSFAAHMQAGAAQLHPPALHALLI
                     NMGGMANAWDHGVRYRGTYQMGRQLTWAWEQLAADAPNPAVRKLLAREKVENWYGAQP
                     MRRGLNPLSVVPEYESWYMDFFEHADYDAFWKDPMVNWSEHYAETSDVPMLQVGGWYD
                     IFLAGTFQNFAALAKLKKSPQRVLVGPWTHHGNTRPYAGDVSFGAAAAIADFDTTFHL
                     RWFDHFLKGEANGVEHDAPIRLFIMGTGDGHMDPDGRLFHGGYWRD"
     gene            1287..1466
                     /locus_tag="VHN20_12470"
     CDS             1287..1466
                     /locus_tag="VHN20_12470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726625.1"
                     /translation="MELDRVLLTQLAVLAVATVAVLTGIGLGARVLWRLTGRVQPRES
                     LPGVSAGLAEVQRTR"
BASE COUNT          252 a          543 c          540 g          268 t
ORIGIN      
        1 cgtcgcgcca gtagccgccg tgaaagaggc gaccgtccgg gtccatgtgc ccgtcgccgg
       61 tgcccatgat gaagaggcgg atcggcgcgt cgtgctcgac accgttcgct tcgcccttga
      121 ggaaatgatc gaaccagcgc aggtggaacg tcgtatcgaa gtcggcgatc gccgccgcgg
      181 cgccgaagga gacgtcgccc gcgtacggac gcgtgttgcc gtgatgcgtc caggggccga
      241 cgagcacgcg ctgtggggat ttcttcagct tcgcgagcgc ggcgaagttc tgaaacgtgc
      301 cggcgaggaa gatgtcgtac cagccgccca cctggagcat cgggacgtcg gacgtctcgg
      361 cgtagtgctc ggaccagttg accatcggat ccttccagaa cgcgtcgtag tccgcatgct
      421 cgaagaaatc catgtaccag ctctcgtact ccggcaccac cgacagcgga ttcaggccgc
      481 gacgcatcgg ctgcgcgccg taccagttct ccaccttctc ccgggcgagc agcttcctca
      541 cggcgggatt cggcgcgtcg gccgcgagct gttcccaggc ccacgtgagc tgccggccca
      601 tctggtaggt gccgcgatac cgcaccccgt gatcccaggc gttggccatg ccgcccatgt
      661 tgatgagcag ggcatgcagc gcgggcggat gcagctgggc cgcgccggcc tgcatgtgcg
      721 cggcgaacga cgtgccccac atcccgactt tcccgttcga gaacggctgc ttcgcgagcc
      781 actcgatcgt gtcgtatccg tcggtcgcgt cggccggctg caccttgagg aacgtccctt
      841 cggacttgaa tcgtccgcgc gcatcctgca ccgccaccac gtacccgtgc cgcgcaaacc
      901 actcggcgtc gcggcgctgc gtcgtcttgt cgtacggcgt gcgttggagc aggacgggca
      961 gcggctcgtt caccggcgcg ccgttgcgcg cggggcggta gacgtcggtg gccatgcgct
     1021 tgccgtcgcg catcgggacc atgacgttct cgccggcgag gaccgcgtcg tatggcgcgg
     1081 ccgtcgattg cgccggcaga tgcgcggcaa tcagcgacga cgtcaggacg acgagcgaca
     1141 cgggtcggtg gagcacggaa caagtatatt gcgcaccggc cgtgcgcgtc acgggccgac
     1201 gaggcgcccc gctccaaagt ggagtcgtgc aacccgatgc cttcacgcct cgtacagcag
     1261 ggaccaatca aacggagggg tgcccgatgg agctcgatcg cgtgttgtta acgcagctgg
     1321 cggttctcgc cgtcgcgacg gtcgccgtgc tgaccggcat cgggctcggc gcccgcgtcc
     1381 tctggcggct gacggggcgc gtgcagccgc gcgagtcgct gccgggcgtc tccgcgggtc
     1441 tcgccgaggt gcaacggact cgctagagtc agtcatgcca tcccagccac aagaaaccct
     1501 cgcgtcctcg aatgcgagtt tcgccgacgt caacggccag cacgtgttct acagcgtgca
     1561 cggcgccggc aagccgctga ttcttcttca cggcggcatc aac
//
LOCUS       DATAIQ010000753         2870 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_131837, whole genome shotgun sequence.
ACCESSION   DATAIQ010000753 DATAIQ010000000
VERSION     DATAIQ010000753.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2870)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2870)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2870
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_131837"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(155..571)
                     /locus_tag="VHN20_12475"
     CDS             complement(155..571)
                     /locus_tag="VHN20_12475"
                     /inference="COORDINATES: protein motif:HMM:NF025453.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4267 domain-containing protein"
                     /protein_id="HEX2726626.1"
                     /translation="MALRDPMSWLVLGLAALFLWIGLLLAAAPRVGAQLFGIPSLDDD
                     SLAYVRALGFRDLALALYIVALTLWTSRRALAIVLGITVLIPLLDFGLVLAARGFSSP
                     WHLAMHAGSAAVFAGLALSCARSRRADAGPNVRSGG"
     gene            complement(620..1726)
                     /locus_tag="VHN20_12480"
     CDS             complement(620..1726)
                     /locus_tag="VHN20_12480"
                     /inference="COORDINATES: protein motif:HMM:NF024771.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enolase C-terminal domain-like protein"
                     /protein_id="HEX2726627.1"
                     /translation="MSAQGPATRLTIRGVRTTAVEVPMTFALGTSAAIIRAAPLLLIE
                     LDTDEGVTGRTYLFCYRRSGARAIADLLHDAVELVKGERAAPVDVGALLSRRFALIGV
                     TGVARMALSGLDAALWDAAAMAAGVPLARLLGAEPKPIPVYNSNGLGLMAPEAAADEA
                     QKLCEGGFGAVKLRLGYATLDDDLAAARAVRRALPDGVALMADYNQALSRAEALRRGR
                     ALDDEGLYWVEEPIRHDDYAGHAALTDELTLPIQIGENFNGPDAMAQALAVQACDLVM
                     PDLARIGGVTGWMQAAGVAAAHGIPMSSHLFPEVSCHLLAASPTRHWLEYVDWANAII
                     EEPLRIENGQAAVADRPGSGLTWNDKAVQRYALA"
     gene            complement(1728..2651)
                     /locus_tag="VHN20_12485"
     CDS             complement(1728..2651)
                     /locus_tag="VHN20_12485"
                     /EC_number="1.1.1.169"
                     /inference="COORDINATES: protein motif:HMM:TIGR00745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008677 - 2-dehydropantoate 2-reductase
                     activity [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydropantoate 2-reductase"
                     /protein_id="HEX2726628.1"
                     /translation="MKIAVMGSGGLGGYFGARLAAGGSDVSFVARGAHLAAMQEHGLS
                     VEGPEPIHVAKVKATSDPAAVGPADVVVFAVKLWDTEETLRLITPMVGPHTTLISFQN
                     GVLKDDYLRKAFDPARIMGGVGYVATTIDRPGVIRQTGPMHRLIFGEFDGVRSARAEA
                     LLDACLKGGIKAEISSDIRRDIWQKYVFLVGLSGTTTTMRLPIGPIRSHPQTRAFLLD
                     VMREVVAVGRAHGVNLDADYAEQRLAFADGVAFDMTSSMHHDLERGNRLEVPWLSGGV
                     VALGEQVGVPTPLNRAIAAILALHADGRRGP"
BASE COUNT          477 a         1025 c          948 g          420 t
ORIGIN      
        1 gaccggcccg ctaccgccgg ctgcatggat gcgaaagtct tcggccgcgt tctccgttgc
       61 cgaccagtgt cgaattccgg cacggaccgg acgcattgcc cgcgaatttc tccgcgcctc
      121 agcacgaccg cagaggcggg cttcatcgcg gcggtcaccc accgcttcgc acgttcggcc
      181 cggcgtcggc tcgccgcgag cgtgcgcacg acaaggcgag accggcgaac accgcggcgc
      241 tgccggcatg catggccagg tgccacggcg acgagaagcc gcgggcagcc agcaccagcc
      301 cgaaatcgag aagagggatc aagacggtta tcccgagcac gatggcgagc gcgcgacgcg
      361 acgtccacaa cgtcagcgcc acgatgtaga gggcgagcgc gagatcgcgg aagccgagcg
      421 cacggacata ggcgaggctg tcgtcgtcga gcgagggaat cccgaacagt tgcgcgccga
      481 cgcgcggcgc cgcggccagc aacaggccga tccatagaaa gagagccgcg agaccgagca
      541 cgagccagct catcgggtcg cgcagggcca tcacatgctc ctctgccagc tgcaccccgc
      601 cgcgccgcgc ccggggacct cacgcgagcg cgtatctctg gacggccttg tcgttccagg
      661 tcaggccgct gccaggccgg tccgccacgg cagcctgccc attctcaatg cgcagcggct
      721 cctcgatgat ggcgttcgcc cagtcgacgt attcgagcca gtgccgcgtc ggactcgcag
      781 cgagcaaatg gcagctcact tccggaaaga gatgcgacga catcggaatg ccatgcgccg
      841 ccgccactcc cgcggcctgc atccagccgg tgacgccgcc gatgcgggcg aggtccggca
      901 tgacgagatc gcaggcttgc acggcgagcg cctgcgccat cgcatccgga ccattgaaat
      961 tctcgccgat ctgaatcggc agggtgagtt cgtcggtcag cgccgcgtgc ccggcataat
     1021 catcgtggcg gatcggctcc tcgacccagt agaggccttc gtcgtccagc gcgcgcccgc
     1081 ggcgcaaggc ctcggcgcgt gacagcgcct gattgtaatc ggccattaag gcgacgccgt
     1141 cgggaagcgc gcgccgcacg gcacgggccg cggcaaggtc atcatcgagc gtcgcgtagc
     1201 caagacgcag cttgaccgcg ccgaacccgc cctcgcaaag tttctgcgct tcgtcggcgg
     1261 ctgcctccgg cgccatgagg ccaaggccat tgctgttgta gacgggaatc ggcttcggtt
     1321 ccgcgcccag cagacgtgcc agcggcacgc cggcagccat ggccgccgcg tcccacagcg
     1381 ccgcatcgag acccgagagg gccatgcgcg ccaccccggt cacgccgatc agcgcgaagc
     1441 ggcggctcaa cagtgcgccc acgtcgaccg gagctgcccg ttctcccttt acgagttcga
     1501 cggcatcgtg cagcagatcg gcgatcgcgc gcgctccgct gcgacggtag cagaacaagt
     1561 aggtgcgccc ggtcacgccc tcgtccgtgt cgagctcgat cagcaacaac ggcgccgcgc
     1621 ggatgatcgc cgcgctggtg ccgagcgcga acgtcatcgg gacttcgacg gcggtggtgc
     1681 gcaccccgcg gatcgtgaga cgcgtggccg gcccctgcgc gctcatctca aggccctcgc
     1741 cgcccgtcgg catgcagcgc caggatcgcg gcgatggcgc ggttgagcgg ggtcggcacg
     1801 ccgacctgct cgccgagcgc caccacgccc cccgacagcc atggcacctc gagccggttg
     1861 ccgcgctcga ggtcgtggtg catcgatgat gtcatgtcga aggcgacgcc gtccgcgaag
     1921 gcgagcctct gctcggcata atccgcgtcg agattgacgc catgcgcgcg cccgaccgcg
     1981 acgacctcgc gcatcacgtc gagcaggaag gcgcgcgtct gtggatggga acggatcgga
     2041 ccgatcggca gacgcatcgt cgtcgtggtg ccagagagcc cgaccaggaa cacgtatttc
     2101 tgccagatgt cgcggcggat gtcggagctg atctcggcct tgatgccgcc cttgaggcag
     2161 gcgtcgagca gggcctcggc gcgtgccgag cgcacgccgt cgaactcgcc gaagatgagg
     2221 cgatgcatcg gaccggtctg acggatcacg cccggccggt cgatggtggt cgccacgtag
     2281 ccgacgccgc ccatgatccg tgcagggtca aaagccttgc gcagatagtc gtccttcagc
     2341 acgccgttct ggaacgagat cagcgtcgtg tgcggcccca ccatcggcgt gatcagccgc
     2401 agcgtctcct cggtgtccca gagtttcacg gcgaagacga ccacatcggc gggcccgacg
     2461 gcggcaggat cgctggtcgc cttgaccttg gccacatgga tcggctccgg cccctcgacc
     2521 gacaggccgt gctcctgcat agcggcaaga tgggcgcccc gggcgacgaa gctcacgtcg
     2581 cttccgccgg cggccagccg agcaccaaag tagccgccga gacctcccga tcccatcacc
     2641 gcgatcttca tccgaccctc gcgcaagttg ccggactggc acatcccgcc ggccgcgacc
     2701 cctcctaaga tgccggccgg ctggagaaaa gccccccttc cgtgcggtcg acggaacgcg
     2761 cctgcgaagc ccggcgttgc cgggcgagcc gtttgttgcg gatatcgggt caggcgcctg
     2821 gtggcccgct ggcggctctc tctctctctc tctctctctc tctctctctc
//
LOCUS       DATAIQ010000754         1856 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_454302, whole genome shotgun sequence.
ACCESSION   DATAIQ010000754 DATAIQ010000000
VERSION     DATAIQ010000754.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1856)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1856)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1856
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_454302"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..686)
                     /locus_tag="VHN20_12490"
     CDS             complement(<1..686)
                     /locus_tag="VHN20_12490"
                     /inference="COORDINATES: protein motif:HMM:NF036686.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726629.1"
                     /translation="MAFSSWRGIAGLVNPTLRPGMTEEVIRLMPEGIGVLPLFLNISR
                     GTEEEFATVMGAYEQNIALLAEQKCDVIHPNGAPPFMVQGLEAETRLVASWEEKYRTP
                     IFTAPQNHVTALKAINAKKIVGASYFPGKINDVFAKYFRDAGFTVLAMEGIDVPFNQV
                     QTLSGQQVYAHIKRNFLQHKGADAIYMLGSGWRTLDIIEMLEQDLQVPVVHPVTARVW
                     EIQKRLHVRE"
     gene            852..>1856
                     /locus_tag="VHN20_12495"
     CDS             852..>1856
                     /locus_tag="VHN20_12495"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX2726630.1"
                     /translation="MQFGLYAPIPMVAVGSPEIARAAAEALQPLPDGRRDAQFDHSVD
                     LLLEADRVGFDLTLFAERHLGHDLSAWVLASAIAPRFEHIRPLVAVHPGLWDPVMTAK
                     LAASLDRISRGRMAINIVNGWFDQEFEMFGGKVLQGEERYQRTTEFIAIMRGLWTNET
                     FSYSGAHYNVDKGQLLLKPASPTPPEIFSVSTSDRGREFIAQDCDWWFIEFPKTAEST
                     DELMRSIEGSIADMRQRAERAGRKVRFALNPFLALGGSEQEALDATVKAIFALEAEPD
                     SRKIERRILPATKAGCIGRPEDVRRQVQRFENLGIELLLLKMIASVDNVRTIGGEVIA
                     P"
BASE COUNT          305 a          600 c          615 g          336 t
ORIGIN      
        1 ttctcgcgca cgtggagacg cttctggatt tcccacacgc gcgcggtcac cgggtgcacc
       61 accgggacct gcagatcctg ctcgagcatc tcgatgatgt cgagcgtgcg ccatcccgag
      121 ccgagcatgt agatcgcgtc ggcgcccttg tgctggagga aattgcgctt gatatgcgcg
      181 tagacttgct ggcccgacag ggtctggacc tggttgaacg ggacgtcgat gccttccatg
      241 gcgagcaccg tgaagccggc gtcgcggaaa tatttggcga agacgtcgtt gatcttgccc
      301 gggaagtagc tggcgccgac gatttttttc gcgttgatcg ccttgagggc ggtgacgtgg
      361 ttctgcggcg cggtgaagat cggtgtccgg tatttttcct cccatgacgc gaccagccgg
      421 gtctcggcct cgagcccctg caccatgaaa ggcggcgcgc cgttgggatg gatcacgtcg
      481 catttctgct cggcgagcag ggcgatgttc tgctcgtagg cgcccatcac ggtcgcgaat
      541 tcttcctcgg ttccgcggct gatgttgagg aatagcggca gcaccccgat gccctcgggc
      601 atgagccgga tcacctcctc ggtcatgccc ggcctcaatg tcgggttgac gagccctgca
      661 atgccgcgcc agctcgaaaa tgccatcctg ctctctccct gcgatcccgt ggttgatgct
      721 gcggcgttaa gccgagcaca ttaacggggc cgcggacaag agctccgcgc gaacgcgggg
      781 gcgggtcaaa ttggctcttg atcgggacgg gcagagggac gagagttccg gccctcgaaa
      841 ggtgttcgga catgcaattc ggtctttatg ctcccatccc gatggtggcc gtcggctcgc
      901 cggaaatcgc gcgggcggcg gcggaagcct tgcagccgct tccggacggc cgtcgcgacg
      961 ctcagttcga tcacagcgtc gacctgctgc tggaggccga tcgcgtcggc ttcgacctga
     1021 ccttgttcgc ggagcggcat ctcggccacg acctgtcggc ctgggtcctg gcgagcgcga
     1081 tcgccccgcg cttcgagcac atccgccccc tcgtcgccgt gcatccggga ctctgggacc
     1141 cggtcatgac cgccaagctc gccgcctcgc tcgaccgcat cagcaggggc cgcatggcga
     1201 tcaacatcgt caacggctgg ttcgaccagg aattcgagat gttcggcggc aaggtcctgc
     1261 agggcgagga gcgctaccag cggaccaccg agttcatcgc catcatgcgc ggcctgtgga
     1321 cgaacgagac gttctcgtat tccggcgcgc actacaacgt cgacaagggc cagcttctgc
     1381 tcaagccggc gagcccgacg ccgccggaaa tcttctccgt gagcacgagc gaccgcggcc
     1441 gcgagttcat cgcgcaggat tgcgactggt ggttcatcga attccccaag acggccgaat
     1501 ccaccgatga gctgatgcgc tcgatcgagg ggtcgatcgc tgacatgcgg cagcgcgccg
     1561 agcgcgcggg gcgaaaggtc cgctttgcgc tgaacccgtt cctggcgctc ggcggcagcg
     1621 agcaggaggc gctggacgcg accgtcaagg cgatcttcgc gctcgaggcc gagcccgaca
     1681 gccgcaagat cgagcgccgc atcctgccgg cgaccaaggc cggctgcatc ggccggcccg
     1741 aagacgtgcg ccgccaggtc cagcgcttcg agaacctggg catcgagctg ctgctgctca
     1801 agatgatcgc gtcggtcgac aacgtgcgca cgatcggcgg cgaggtcatc gcgcct
//
LOCUS       DATAIQ010000755         2246 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_454376, whole genome shotgun sequence.
ACCESSION   DATAIQ010000755 DATAIQ010000000
VERSION     DATAIQ010000755.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2246)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2246)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2246
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_454376"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..717
                     /locus_tag="VHN20_12500"
     CDS             <1..717
                     /locus_tag="VHN20_12500"
                     /inference="COORDINATES: protein motif:HMM:NF012880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016624 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, disulfide as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEX2726631.1"
                     /translation="GRAGTWHVCSREAGFLSTSAMVGGSIGLAVGAGLAAQRAGKRAI
                     SVALFGDGTLDEGISYEALNFASVFELPVLFMCENNSKTGQRPSSMLAANSLLDIPKA
                     LRIDSVLVDGADVEAVYAAAAHAAGQVRKTGKPLFIEAKLERWPGSHQIKPELTTGRT
                     DIGMAFGGAPIKGEHADWIRDQDPVLRQLRKLALEGILGEADAVRLDRAVDEQIRRAR
                     VYAEGSPFPSPESAPEGVFA"
     gene            717..1718
                     /locus_tag="VHN20_12505"
     CDS             717..1718
                     /locus_tag="VHN20_12505"
                     /inference="COORDINATES: protein motif:HMM:NF014798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase C-terminal domain-containing
                     protein"
                     /protein_id="HEX2726632.1"
                     /translation="MKAVAMVEKSFAQAMVDALAYTLRTEPNAFVIGRGLTGHGSEAD
                     AERPLHEEFGARIIDPPTAESLVAAVGAGAAAAGFKVFVHLGTASFAFEAVNQIVNEA
                     ANIRYMSGGQLSAPVVFQMYHGIRGGGGPQHSHSPQAMFANCAGLQILLPSSPADAQG
                     LLRTAMAGSDPAILMNHNRLLGLRGDVPAGDFRIPFGMADIKRKGRDVTVIATSYIVN
                     EALKAAESLAADGVDVEVVDPRTAVPLDRERICDSVRKTGRLVVVDEANMTCSIASEI
                     AATVAELAFDALKAPILRVARPDVPMPYSPPLEQYLSPNAAKIAHAIKTVIGRPAQG"
     gene            1774..>2246
                     /locus_tag="VHN20_12510"
     CDS             1774..>2246
                     /locus_tag="VHN20_12510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008837052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEX2726633.1"
                     /translation="MNDMPRITQEMIDLYDQYTHVTLDRAGYLDRLAALVGSTELAQR
                     ITSLIEANKASASIVPENDKRLKAQTVKFGEAMTGYLVMPAEAGGKLPAAMVVHENRG
                     LVAHIKDVARRLALEGFVVLAPDFLAPDGGTPEDEEQGREMIQKLDRAKVVQHGV"
BASE COUNT          389 a          745 c          786 g          326 t
ORIGIN      
        1 gggcgcgccg gcacgtggca cgtctgcagc cgggaagccg ggttcctctc cacctcggcg
       61 atggtcggcg gcagcatcgg gctcgcggtc ggcgccgggc tcgccgcgca acgcgccggc
      121 aagcgcgcga tcagcgttgc cctgttcggg gacggaacgc tcgacgaggg catcagctac
      181 gaggcgctca acttcgcctc ggtgttcgag ctgcccgtcc tgttcatgtg cgagaacaac
      241 agcaagacgg ggcaacggcc ctcgtcgatg ctggcggcga attccctgct cgatatcccg
      301 aaggcgctgc gcatcgacag cgtgctggtc gacggcgccg atgtggaggc cgtctatgcg
      361 gcggcagcgc acgcggccgg gcaggtgagg aaaaccggca agccgctgtt catcgaggcg
      421 aagctcgagc gctggcccgg ctcgcaccag atcaagccgg agctgaccac cggccgcacg
      481 gacatcggca tggcgttcgg cggcgcgccg atcaagggcg agcacgccga ctggatcagg
      541 gaccaggacc cggtgcttcg ccagcttcgc aagctcgccc tggaggggat tctgggtgag
      601 gccgatgcgg tgcggctcga ccgggccgtc gacgagcaga tcaggagggc gcgggtctac
      661 gccgagggaa gtccgttccc gagcccggaa agcgctcccg aaggcgtatt cgcgtgatga
      721 aggcagtggc catggtcgag aagagttttg cccaggcgat ggttgacgcc cttgcctaca
      781 ccctgaggac ggagccgaat gcgttcgtga tcgggcgcgg cctgaccggg cacggcagcg
      841 aagccgatgc ggagcggcct ctgcacgagg aattcggcgc gcggatcatc gatccgccga
      901 ccgcggaaag cctcgtcgcg gccgtcgggg ccggcgctgc cgcggcgggg ttcaaggtgt
      961 tcgtgcatct cggaaccgcg tcgttcgcgt tcgaggcggt caaccagatc gtcaacgagg
     1021 cggccaacat ccgttacatg tcgggcggcc agctgagtgc gcccgtcgtc ttccagatgt
     1081 atcacggcat caggggcgga ggggggccgc agcacagcca cagcccgcag gccatgttcg
     1141 cgaactgcgc cgggctgcag atccttctgc cgtcgtcccc tgccgacgcg cagggcctgc
     1201 tgcgcacggc gatggccggc agcgatccgg ccatcctgat gaaccacaac cgcctgctcg
     1261 gcctgcgcgg ggatgtgccc gcgggggact tccgcattcc gttcgggatg gcggacatca
     1321 agcgcaaggg ccgggacgtg accgtcatcg ccacgtccta catcgtcaac gaggcgctca
     1381 aggcggccga gtccctcgcc gccgacggcg tcgatgtcga ggtcgtcgat ccgcgcacgg
     1441 ccgttcccct cgacagggag cgcatctgcg attcggtgcg caagacgggg cgtctcgtgg
     1501 tggtcgatga ggccaacatg acctgcagca tcgcgtcgga gatcgccgcg accgtcgccg
     1561 agctcgcgtt cgacgccctc aaggcgccga tcctgcgcgt ggcccgtccc gacgtcccaa
     1621 tgccgtacag tccgccgctc gagcaatacc tgtcgccgaa cgcggcgaaa attgcgcacg
     1681 ccatcaaaac cgttataggc aggcccgcgc agggttaggg ccgcgccggc ccgtctcgcc
     1741 agctaaccag tccgtcaaca gggagcgaaa aacatgaacg acatgccgcg catcacgcag
     1801 gagatgatcg acctctacga ccagtacacg cacgtgacgc tcgatcgcgc cggatacctc
     1861 gaccgcctcg cggcgctggt gggctcgacg gaactggcac agcgcatcac gtcgctgatc
     1921 gaagccaaca aggcgtcggc atcgatcgtg cccgagaacg acaagcgcct gaaggcgcag
     1981 acggtcaagt tcggcgaagc gatgaccggc tacctcgtga tgccggccga ggccggcggc
     2041 aagctgccgg ccgcgatggt cgtgcatgag aaccgcggcc tcgtcgcgca tatcaaggat
     2101 gtggcccggc gccttgccct cgaaggtttc gtggtgctcg caccggactt cctggcgccg
     2161 gacgggggca cgcccgagga cgaggaacag ggccgcgaga tgatccagaa gctcgatcgc
     2221 gccaaggtcg tgcagcacgg ggtcca
//
LOCUS       DATAIQ010000756         4708 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_39057, whole genome shotgun sequence.
ACCESSION   DATAIQ010000756 DATAIQ010000000
VERSION     DATAIQ010000756.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4708)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4708)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4708
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_39057"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..859)
                     /locus_tag="VHN20_12515"
     CDS             complement(<1..859)
                     /locus_tag="VHN20_12515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018642029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEX2726634.1"
                     /translation="MSTALVAREGAAQGSARKIGSIRRERRWALVGAYVALAVFVLFF
                     LMPPFHMLVTSLKSSAEIADLQGSPWMLRSPTLENYRDLLTHGNYVVHFRNSVIVTLS
                     VVAITMVISTLAAFALSRMRFWGSTALATGVFLTYLVPETLLFIPLFQIIGGMGLYNN
                     LFAMILIYPTLTVPFCTWIMIGYFSSIPKELDEAALIDGANHFQMLWKIFIPVALPGI
                     LAATIFAFTVSWAQFLYPMAFLVSSDQMVLTVGIVSDLIRGDTFAWGKIMAGALMAAA
                     PPLLVYAFLM"
     gene            complement(859..1695)
                     /locus_tag="VHN20_12520"
     CDS             complement(859..1695)
                     /locus_tag="VHN20_12520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011503312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEX2726635.1"
                     /translation="MMTLPLITVIVGLVAYPFFYALYLSMLNKRMTRFVGIDNFTFLM
                     TRETFHGVIWQSVIFAVGAVIAKALIGFILAHVLHTLPAKGQKKWRGMLLVPWVIPPA
                     ISTLAWWWLFDPSYSALNWMLVTVGVPPVAWLGEPNWARFAVILVNVWYGAPFFMIMY
                     LAALKSVPDQLYEAAAIDGATGWQKLRYVTVPMMRNIIAITVLFSLIVTFANFDIVRI
                     LTNGGPQDRTHIFGTFAFQVGIQSGDIPLGASVSLFIFPILAVFSIFVLRGVTKRTRE
                     TA"
     gene            complement(1875..3239)
                     /locus_tag="VHN20_12525"
     CDS             complement(1875..3239)
                     /locus_tag="VHN20_12525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012044181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX2726636.1"
                     /translation="MTRHGITRRNILRTAAVGGAMSAFPLVNVHGQSSGGKLALGLWD
                     HWVGAAANDATRAIINDWAQKNRVEVTVDFITTVGNKNLITIAAEAQARQGHDILSFP
                     TWMVHDQASLLEPMDDVMGRLTTKYGEVNEASVYLAKVGGKWMAVPQTPGSQYKGSAA
                     RIDLMKQHAGIDVVAMYPAEDKLGPGADKWDWETFLVAAQKCNAAGYPFALPAGTFTD
                     AVDWVGAMFASFGAELVDARGNITIRKNDKVREVMDYAKRLFQHIPSEMFAADDATNN
                     RALIAGKSALIFNPPSAWAVAKRDAPDVARQTWHFPPPGGPAGRFAPHLPYFYGLWSF
                     SKNKGAAKELIEHLSEVDQVRKMVAASSGYDIPPFASMFDKIETWRTVEPPQGTVYNY
                     PVRKHHNAKPSIACAPAPPEIAVQMYNQAIQTKMIARMVQNNEPLDRVLAWAEQEVEG
                     FKRG"
     gene            complement(3469..4140)
                     /locus_tag="VHN20_12530"
     CDS             complement(3469..4140)
                     /locus_tag="VHN20_12530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006613902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RraA family protein"
                     /protein_id="HEX2726637.1"
                     /translation="MQIGFQVNPTPNALDLSAVELLRGIPTAILSDNMARLFAVGPAL
                     RPYHGGAALVGSALTVRTRPGDNLMVHKAVDMAQPGDVIVVDAGGDLTNAIVGEILIA
                     LARRRGVAGYVVDGAVRDVDAIAASDFPVYARGVTHRGPYKDGPGEINVTVSVGGQTI
                     APGDVVVGDGDGVLAVPRKAAARIAELARAQMGREAATLRAIADGSIDRSWVDDTLRA
                     KGLGI"
     gene            complement(4150..4665)
                     /locus_tag="VHN20_12535"
     CDS             complement(4150..4665)
                     /locus_tag="VHN20_12535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,4'-dihydroxyacetophenone dioxygenase family
                     protein"
                     /protein_id="HEX2726638.1"
                     /translation="MPAKDKWVPYRHAQPRESPPELVVPDAIPADERVWVPVEENVWF
                     RPLLMCASRGYWMNLLRVRKSGVLSRHRHPLPVHGFVLKGEWRYLEHDWVAREGGYVY
                     EAPGETHTLVVDAHVEEMITLFQVNGAMIYVDPDGNTTGYDDVFTRIDKCRAHYAGNG
                     LGGDYIDQFIR"
BASE COUNT          823 a         1516 c         1574 g          795 t
ORIGIN      
        1 ccatcaggaa cgcgtagacc agcaggggcg gcgcggccgc catcagcgca ccggccatga
       61 tcttgcccca ggcgaaggtg tcgccgcgta tcaggtccga cacgatgccc accgtcagca
      121 ccatctggtc ggagctgacc agaaacgcca tcgggtagag gaactgcgcc cacgacaccg
      181 tgaacgcgaa gatggtcgcc gcaaggatgc cgggcagcgc caccgggatg aagatcttcc
      241 agagcatctg gaagtgattg gccccgtcga tcagtgccgc ctcgtccagc tctttcggga
      301 tggagctgaa atacccgatc atgatccagg tgcagaacgg cactgtaagt gtcggataga
      361 tcagaatcat cgcgaagaga ttgttgtaaa gtcccatgcc gccgatgatc tgaaacaggg
      421 gaatgaacag cagggtttcc ggcaccaggt aggtcaggaa cactcccgtg gcgagcgccg
      481 tgctgcccca gaagcgcatg cgcgagagcg cgaaggcggc aagcgtgctg atcaccatgg
      541 tgatggcgac caccgacagg gtcacgatca ccgagttgcg gaaatgcacg acgtagttgc
      601 cgtgggtcag gaggtcccgg tagttctcga gcgtcgggct cctcagcatc caggggctgc
      661 cctggagatc ggcgatctcg gcgctgctct tgaggctggt tacgagcatg tggaacggtg
      721 gcatcaggaa gaagaggacg aacacggcga gggcgacgta ggcgccgacc agtgcccagc
      781 ggcgctcgcg cctgatgctg ccaatcttgc gggccgagcc ttgcgccgct ccttccctgg
      841 caacgagtgc cgtgctcatc acgccgtctc cctggtgcgt ttggtgacgc cgcgcagcac
      901 gaagatcgaa aacaccgcca gaatggggaa tatgaacagc gacaccgacg cgccgagcgg
      961 gatgtcaccc gactggatgc caacctggaa ggcaaaggtg ccaaagatgt gcgtcctgtc
     1021 ctgcggcccg ccgttggtca ggatgcgcac gatgtcgaaa ttggcgaagg tgacgatcag
     1081 gctgaacagg acggtgatgg cgatgatgtt gcgcatcatc ggcacggtca cataacgcag
     1141 cttctgccag cccgtcgccc cgtcgatcgc ggccgcctcg tagagctggt cgggaaccga
     1201 cttgagcgcc gcgagataca tgatcatgaa gaacggcgcg ccgtaccaca cgttgacgag
     1261 gatcaccgcg aagcgcgccc agttcggctc gcccagccag gcgaccggcg gcacgccgac
     1321 cgtcaccagc atccagttga gggccgagta ggacggatcg aacagccacc accacgccag
     1381 cgtcgagatc gccggcggga tgacccacgg caccaggagc atgccgcgcc acttcttctg
     1441 gcctttggcc ggcagcgtat gcagcacatg cgccaggatg aagccgatca gggccttggc
     1501 gatgacggcg ccgaccgcga agatcacgct ctgccagatc accccgtgga acgtctcgcg
     1561 ggtcatcagg aacgtgaagt tgtcgatgcc gacaaagcgc gtcatgcgct tgttcagcat
     1621 cgacaggtag agggcgtaga agaacggata cgccaccagc ccgacgatca cggtgatcag
     1681 cggcagcgtc atcatgaagg cgagcgtgga ccgccgccgt gcgatgcggc gcagggtacc
     1741 cttgcccggt cgcgcaatgg cagcgggaag ggccggcgct gtggcgatgt tgtcggcggc
     1801 catggcaggc ctttcccgga tgagtgaggt gcggacccgc ggccggtcga gggtccgcgg
     1861 atccgggtgt caggtcagcc gcgcttgaac ccttccacct cctgctcggc ccaggccagc
     1921 acgcggtcca ggggctcgtt gttctgcacc atgcgggcga tcatcttcgt ctggatcgcc
     1981 tggttgtaca tctgcacagc gatctcgggc ggagccggag cgcaggcgat gctcggcttg
     2041 gcgttgtggt gcttgcggac cgggtagttg tagaccgtgc cctgcggtgg ctcgaccgtc
     2101 cgccaggtct cgatcttgtc gaacatgctg gcgaatggcg ggatgtcgta gccactcgac
     2161 gccgcgacca tcttgcgcac ctggtcgacc tcggacagat gctcgatcag ctctttcgcc
     2221 gcgcccttgt tcttgctgaa gctccacagg ccgtagaaat atggcaggtg cggcgcgaac
     2281 cgtcctgcgg gcccgcccgg gggtgggaag tgccaggtct ggcgcgccac gtccggcgca
     2341 tcgcgcttgg ccacggccca ggccgagggc gggttgaaga tgagcgccga cttgccggcg
     2401 atcagcgccc gattgttggt ggcgtcgtcg gccgcgaaca tctcgctcgg gatgtgctgg
     2461 aacaggcgct tggcgtagtc catcacctct cgcaccttgt cgttcttgcg gatggtgatg
     2521 ttgccgcgcg cgtcgacgag ctcggcgccg aagctcgcga acatggcgcc gacccagtcg
     2581 acggcgtccg tgaaggtgcc ggccggaagc gcgaaggggt agccggcggc gttgcacttc
     2641 tgcgccgcca caaggaaggt ctcccagtcc cacttgtcgg cgcccggacc gagcttgtcc
     2701 tcggccggat acatggcgac gacgtcgatg ccggcatgct gcttcatcag atcgatgcgc
     2761 gccgccgagc ccttgtactg gctgcccggc gtctggggga ccgccatcca cttgccgccg
     2821 accttcgcca ggtaaacgga cgcttcgttc acctcgccgt atttcgtggt gaggcgaccc
     2881 atgacgtcgt ccatgggctc gagaagcgag gcctggtcgt ggaccatcca ggtcgggaag
     2941 gacaggatat cgtgcccctg gcgcgcctgc gcctcggccg cgatggtgat gaggttcttg
     3001 ttgccgacgg tggtgatgaa gtcgacggtg acttcgaccc ggttcttctg cgcccagtcg
     3061 ttgatgatgg cgcgcgtcgc gtcgttcgcc gcggcgccga cccaatgatc ccacaggccg
     3121 agcgccagct tcccgccgga agactgcccg tgaacattga ccagcgggaa cgcgctcatc
     3181 gccccgccta ccgctgccgt gcgcaggatg ttgcgccggg tgatcccgtg acgtgtcatg
     3241 aaaaacctcc ctatcgggtc atacgaccac ctttcttgtt gtgtgggcag attaggcaga
     3301 gagcgccgac aagcgcaact ccatcaaagc gaacggccgg gcggttatta ggctccggcc
     3361 aagcctgaca gcccgcatcg gtatccgggc tttttgatta ttggcgactg ctccgcccgc
     3421 cgccaccagg cacgttccgc agtgcaccat caagcgatgg gcgacggctc aaataccgag
     3481 ccctttggcg cgcagcgtgt catcgaccca gctccgatcg atgctgccgt cggcgatggc
     3541 ccgcagcgtg gcggcctcgc gccccatctg ggcgcgggcg agctcggcga tccgcgcggc
     3601 tgccttccgc ggcacggcga gcacgccgtc gccgtcgccg acgacgacgt cgccgggggc
     3661 aatcgtctgg ccgccgacgc tgacggtcac gttgatctcg ccgggcccat ccttgtaggg
     3721 tccgcggtgg gtgacgccgc gcgcgtagac ggggaagtcg gacgccgcga tcgcgtcgac
     3781 gtcgcgcacc gctccgtcga ccacgtagcc cgcgacgccg cggcggcgcg ccagtgcgat
     3841 caggatctcg ccgacgatgg cgttggtcag gtcgccgccc gcgtcgacga cgatcacgtc
     3901 tcccggctgc gccatgtcga ccgccttgtg gaccatcagg ttgtcgcccg gccgcgtgcg
     3961 cacggtgagt gccgagccga ccagggcggc gccgccgtgg tatggccgca aggccggccc
     4021 gaccgcgaac aggcgggcca tgttgtcgct gaggatcgcg gtcgggatgc cgcgcaacaa
     4081 ttcgacagcc gacagatcca gtgcgtttgg cgtgggattg acctggaacc cgatctgcat
     4141 gcgcgcctct cagcgaatga actgatcgat atagtcccca ccaagaccgt tgccggcata
     4201 atgcgcgcgg cacttgtcga tgcgggtgaa cacgtcgtcg taaccggtcg tgttgccgtc
     4261 cggatcgaca tagatcatgg cgccgttgac ctggaagagg gtgatcattt cctcgacatg
     4321 cgcatcgacg acgagcgtgt gcgtctcacc cggcgcttcg tagacgtagc cgccttcgcg
     4381 ggcgacccag tcatgctcga ggtagcgcca ctcgcccttc agcacgaaac catgcaccgg
     4441 cagcgggtga cgatggcgcg acaggacgcc cgacttgcgg acccgcaaca ggttcatcca
     4501 gtagccgcgc gacgcgcaca tcaggagcgg gcggaaccag acattctcct cgaccggcac
     4561 ccagacccgc tcgtcggccg gaatcgcgtc cgggacgacg agctccggag gcgactccct
     4621 gggctgcgcg tgcctgtagg gcacccattt gtccttcgcg ggcatgaccg tcggggtcgg
     4681 cagagtggtc acggctctct cctttgcg
//
LOCUS       DATAIQ010000757         1677 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_39073, whole genome shotgun sequence.
ACCESSION   DATAIQ010000757 DATAIQ010000000
VERSION     DATAIQ010000757.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1677)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1677)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1677
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_39073"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            4..444
                     /locus_tag="VHN20_12540"
     CDS             4..444
                     /locus_tag="VHN20_12540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018324438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005509 - calcium ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EF-hand domain-containing protein"
                     /protein_id="HEX2726639.1"
                     /translation="MIAAGVTSGTNAQTMPDPPRPELTIAQVTPGQVEGAQPGQPGAM
                     RPGTTGQGPMGQDSMGQAITGQSMMGRAMMGRGMMGPGMGGMPMTGGRGHMMKVMFAI
                     ADTDGDGALSFEEVTAIHKRIFTTIDANKDGKVTIEEIETFMRD"
     gene            complement(823..>1677)
                     /locus_tag="VHN20_12545"
     CDS             complement(823..>1677)
                     /locus_tag="VHN20_12545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018062758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HEX2726640.1"
                     /translation="LAGSVGQDEVLRMAASLDQASSHVIAGALVAEARQRGCRLTSPS
                     EVIEAPGQGVEGIVDGRRVAVGGMNFVRQRLPADAAWMEPRLPPGALAVAVATDGALA
                     GVLVFADRVRAETAALLHGLKKHGIGRIVLASGDRRDVVDTIASGLAFDAVRAELAPD
                     EKIEVVLAERAQGRVMMVGDGVNDAPALAAADVGVAMGARGAAAAAEAADVVLLADRL
                     DPLLAAVTVAQDAKRIALQSVWAGMGLSMVGMCAAALGYLTPVQGALIQEGIDIAVVL
                     NALRALRN"
BASE COUNT          287 a          570 c          574 g          246 t
ORIGIN      
        1 gccattatcg ccgcgggcgt gacgtccggc acgaacgccc agacgatgcc tgatccgccc
       61 cggcccgagc tgaccatcgc acaggtaacg cccggccagg tcgaaggcgc gcagcccggc
      121 caaccgggcg cgatgcgacc cggcacgacg ggtcaaggcc caatggggca ggattcaatg
      181 ggccaagcga taacaggtca aagcatgatg ggtcgcgcga tgatgggccg gggcatgatg
      241 ggtccaggca tgggtggcat gccgatgacg ggtggacgcg ggcacatgat gaaggtcatg
      301 ttcgccattg ccgacacgga cggtgacggg gcgctctcgt tcgaggaggt cacggccatt
      361 cataagcgga tcttcactac catcgatgcg aacaaggacg gcaaagtgac cattgaggaa
      421 attgagacct tcatgcggga ctagcacacg caaccaggtc accggtcgcg cgctggtctt
      481 ctcgagcccg actgtagacg atgagcgtgt tggccgcgtc ctggcggggg gacgaataca
      541 gaaacgtcgc gagtccgcga gaagtgctgt caggagcagg caagcgcgcg tcgcgtcccg
      601 tgcgccattg tctccgccct ttttcgaagc cgtcgcctcc gcggcggccg ccgcgaaggt
      661 gacacacccc gctgaggacg gagcgtcggg cctgccggct atgcggtggc gtaccgctac
      721 aggcgccaac cgcccttctc ggtcgccagc gaggctgcag ccctcgggcg cggcgccgag
      781 cagcacgtcc actgctggcc tttgtgcctc gtcgcgcggg ggttaattcc tgagcgcccg
      841 cagcgcattg agcacaacgg cgatatcaat gccttcctgg atgagagcgc cttgcaccgg
      901 cgtgagatag ccgagcgccg ctgcgcacat cccaaccatc gagaggccca ttccggccca
      961 gacgctttgc agggcgatgc gcttcgcgtc ctgcgcgacc gtcacggccg cgagcagggg
     1021 gtcgaggcga tcggcgagta ggacgacatc ggccgcttcc gccgcggccg ccgcgccgcg
     1081 tgcgcccatg gcaacgccga catcggcggc ggcgagcgcg ggcgcatcgt tgacgccatc
     1141 gcccaccatc atgacacggc cctgcgcgcg ttcggcgagc accacctcga tcttttcgtc
     1201 gggggcgagc tcggccctga ccgcatcgaa ggcaagcccg ctggcaatcg tgtcgaccac
     1261 gtcgcgccgg tcccccgacg cgagcacgat gcggccgatg ccatgcttct tgaggccgtg
     1321 gagcaaggcg gcagtctcgg cgcgcacgcg gtcggcgaag acgaggaccc ccgcgagcgc
     1381 tccgtcggtc gcgaccgcta cagcgagcgc gcccggaggc aatcgcggct ccatccaggc
     1441 ggcatcggcg ggcaggcgtt gccgaacgaa gttcatgcct cccaccgcga cacggcggcc
     1501 gtcgacgata ccttcaacgc cctggcctgg tgcttcgatg acttcggacg ggctcgtcag
     1561 tctgcatccc cgttgccggg cttccgccac cagcgccccg gcgatgacat gggaggaggc
     1621 ttgatcgagc gaagcggcca tgcgcaggac ctcgtcctgc ccgacgctgc cggcgag
//
LOCUS       DATAIQ010000758         1883 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_316495, whole genome shotgun sequence.
ACCESSION   DATAIQ010000758 DATAIQ010000000
VERSION     DATAIQ010000758.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1883)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1883)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1883
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_316495"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            11..481
                     /locus_tag="VHN20_12550"
     CDS             11..481
                     /locus_tag="VHN20_12550"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEX2726641.1"
                     /translation="MASDPENTLILETTKGRVVIALRPDLAPNHVERIKTLARQGFYD
                     GVPFHRVIEGFMAQTGDPTGTGTGGSDLPDLRAEFNREPHVRGTVSMARTSAPHSANS
                     QFFICFDDAGFLDNQYTVWGNVVEGMDNVDQIKRGEPVRDPDRIVSMRVAADAA"
     gene            589..1680
                     /gene="queA"
                     /locus_tag="VHN20_12555"
     CDS             589..1680
                     /gene="queA"
                     /locus_tag="VHN20_12555"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010909613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HEX2726642.1"
                     /translation="MRVDLFDFELPEERIALRPESPRDAARMLVVRPGGAPRLDDRSV
                     RDLPDLLRPGDALVLNDTKVIPARLWGLRTRGEAQARIEILLHKREGGERWRAFARPA
                     KRLAVGDRIRFGEDSESIACLLASLDAEVEEKGEGGEVLLRFAFTGPALDEAIARLGE
                     MPLPPYIEGRRAADERDRIDYQTVYATSEGAVAAPTAGLHFTEELFRRLEQRGVTRHT
                     VTLHVGAGTFLPVKADDVREHRMHAEWGTVARETADALNAARARGGRIIPVGTTSLRL
                     LESAVQDDGTLAPFSGETDIFITPGHRFRAADLLMTNFHLPRSTLFMLVSAFAGLETM
                     QAAYAHAIAGGYRFYSYGDACLLHPADAV"
BASE COUNT          305 a          664 c          630 g          284 t
ORIGIN      
        1 ggacaccctc atggcgagcg atcccgaaaa caccctgatt ctcgaaacca ccaaggggcg
       61 cgtcgtgatc gcgctcaggc ccgacctcgc ccccaatcac gtcgagcgca tcaagacgct
      121 cgcgcgccag gggttttatg acggcgtgcc gttccaccgc gtgatcgagg gcttcatggc
      181 ccagaccggt gatccgaccg gcacgggcac cggcggctcc gacctgccgg acctcagggc
      241 cgagttcaac cgcgagccgc atgtgcgcgg caccgtgtcg atggcgcgca cgagcgcccc
      301 gcattccgcg aattcgcagt tcttcatctg cttcgacgac gccggcttcc tcgacaacca
      361 atacaccgtg tggggcaacg tcgtggaagg catggacaat gtcgaccaga tcaagcgcgg
      421 cgaaccggtg cgcgatcccg accgcatcgt ctcgatgcgg gtcgcggcgg atgcggcgta
      481 aacaaaaccc ctcttccgcc cgggatctcg ggtgttcccg aagatccgtt catttctgcg
      541 caagtcggca acagccgact tgcgtgcggg agcgggggcg ctaagcgcat gcgcgtcgac
      601 ctgttcgatt tcgagctgcc ggaggagcgc atcgcgctgc ggccggaaag cccgcgcgac
      661 gccgcgcgca tgctcgtcgt gcgtcccggc ggcgcgccgc ggctcgacga tcgcagcgtg
      721 cgcgacctgc cggacctgct gcggccgggc gatgcgctcg tgctcaacga caccaaggtc
      781 attcctgcgc gcttgtgggg cctgcgcacg cgcggcgagg cgcaggcgcg catcgagatc
      841 ctgctgcaca agcgcgaggg cggcgagcgc tggcgggcgt ttgcgcggcc ggcgaaacgg
      901 ctcgcggtgg gcgaccgcat ccgcttcggc gaggacagcg agagcatagc ctgcctgctc
      961 gccagcctcg acgcggaagt cgaggaaaaa ggggaggggg gcgaggtgct gctgcgcttc
     1021 gccttcaccg gaccggccct ggacgaggcc atcgcccgcc tcggcgagat gccgctgccg
     1081 ccctatatcg aaggccggcg cgccgccgac gaacgtgacc gcatcgacta tcagacggtc
     1141 tacgcgacga gcgagggcgc ggtcgccgcg ccgaccgcgg gcctgcattt caccgaggaa
     1201 ctgttccgcc ggctcgagca acgcggcgtc acccggcata cggtgacgct gcatgtcggc
     1261 gccggcacgt tcctgcccgt caaggcggac gacgtgcgcg agcaccgcat gcatgccgaa
     1321 tggggcaccg tcgcccgcga aaccgccgac gcgctcaacg cggcgcgggc gcgcggcggg
     1381 cgcatcatcc ccgtgggcac gacctcgctg cgcctgctcg agtcggcggt gcaggacgat
     1441 gggacgcttg cgcccttcag cggcgagacc gacatcttca tcacgccggg ccaccggttc
     1501 cgcgccgccg acctcctgat gaccaatttc catttgccgc gctcgaccct gttcatgctg
     1561 gtcagcgcct tcgcggggct cgagacgatg caggcggcct atgcccacgc catcgccggg
     1621 ggctaccggt tctattccta cggcgacgcg tgcctgctcc accccgcgga cgccgtttga
     1681 caatacactc gcattgtcat ggccgggctt gtcccggcta tcccgaacgg agaagctctt
     1741 ccgatcgaga tgcccggcac acggccgggc atgacacgtt cgggaaggtt agatttcctc
     1801 aatgaccgat accttcacct tcacggtgac gaagaccgac ggcgcggccc gcaccggcga
     1861 gatccgcatg gcgcgcggcg tga
//
LOCUS       DATAIQ010000759         1827 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_454574, whole genome shotgun sequence.
ACCESSION   DATAIQ010000759 DATAIQ010000000
VERSION     DATAIQ010000759.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1827)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1827)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1827
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_454574"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..182)
                     /locus_tag="VHN20_12560"
     CDS             complement(<1..182)
                     /locus_tag="VHN20_12560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007565388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent metallopeptidase FtsH/Yme1/Tma
                     family protein"
                     /protein_id="HEX2726643.1"
                     /translation="MNPNFRNFALWVLIFLLVIALVTLFQSPGHRGGGSDIAYSQLLN
                     DADAGRINNVVISGQE"
     gene            complement(474..1526)
                     /gene="tilS"
                     /locus_tag="VHN20_12565"
     CDS             complement(474..1526)
                     /gene="tilS"
                     /locus_tag="VHN20_12565"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012330271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016879 - ligase activity, forming
                     carbon-nitrogen bonds [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HEX2726644.1"
                     /translation="MAPVGHDEADALFAGLEQATGIILAVSGGPDSVCLMHLISGWRE
                     RGGRPRVTVATVDHGLRADSAAEARAVAKWARTAGLPHRILSWTGEKPKSRIQEMARE
                     MRYRLLGELARKLGASHLVTGHTLDDQAETVLMRLMHGTGIGGLGGMWPEIQRDGVTV
                     ARPLLGVRKARLVATCAAAGWPFFNDPSNVDPRFARARLRGEVLPVLQREGLTVERLA
                     ALAARARRAEEALEARIGAVMAAAARSVNGHVELDAALLRSEPDAILLGVVARAIVGA
                     AGGLSRPIRLERFEARVLGDLRRALEAGAGLRMNMGGALLDLRRDGRLLVRPEPPRRT
                     PQGGTPAKASMRGPRS"
     gene            complement(1616..>1827)
                     /locus_tag="VHN20_12570"
     CDS             complement(1616..>1827)
                     /locus_tag="VHN20_12570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015952913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX2726645.1"
                     /translation="AEQFLKVSTEYTSSQRAPDAMLRLGITLNALGAKDQACATFAQL
                     ERKFPQAAPTVRQGVEREQKRARCV"
BASE COUNT          262 a          653 c          649 g          263 t
ORIGIN      
        1 atctcctggc ccgagatgac gacgttgttg atgcgtccgg catcggcatc gttgagaagc
       61 tggctgtagg cgatatcgct gccgccgccc cgatgaccgg gactctggaa cagcgtgacg
      121 agcgcaatca cgagcaggaa aatgaggacc cacagggcga agttgcggaa gttcggattc
      181 atcggttggc gtcatccctg ggggaaatgg gcgcggggcg cagctgcaaa cgatcccgcg
      241 cgatccagct aatctaggcg tgcccacccc ccttgccaag ggaatgcggc ggcgctgcgg
      301 cgccattcgg gttttatact ttatccgatc tgctggcgga ccctcggctc gggcatggcc
      361 aaccgccttc atcgtcgacg cgcccttcga aaacggcagt gttggagcca tgcgaggacc
      421 tgaggtccgg cgcggtgagg tcgccgcaaa tctacggctg ccccacagct ctgctaggac
      481 cgaggcccgc gcatcgatgc cttcgcaggc gtcccgccct gcggggtccg gcgggggggc
      541 tccggccgga ccagaaggcg cccgtcccgg cggaggtcga gcagcgcgcc gcccatattc
      601 atgcgcagcc cagcgcccgc ttcgagcgcc cggcgcaggt cgccgagcac ccgggcctcg
      661 aaccgctcga ggcggatcgg gcggctgagg cctcctgcag cgccgacgat ggcccgcgcc
      721 accaccccga gcaggatggc atcgggctcg ctgcgcagca gcgcggcatc gagctcgacg
      781 tggccgttca cgctgcgcgc ggccgccgcc atcacggcgc cgatgcgcgc ctcgagcgcc
      841 tcctcggccc gccgtgcccg tgccgctagc gccgcgaggc gctccaccgt caggccctcg
      901 cgctgcaaga ccggcagcac ctcgccgcgc aggcgggcgc gggcgaagcg cggatcgacg
      961 ttggaaggat cgttgaagaa gggccagccg gcggccgcgc aggtcgccac gagccgcgcc
     1021 ttgcgcacgc cgagaagcgg gcgcgccacg gtgacaccgt cgcgctggat ctcgggccac
     1081 atgccgccga gccccccgat tccggttccg tgcatgagcc gcatcaggac ggtctcggcc
     1141 tggtcgtcga gggtatggcc ggtgaccaga tgcgaggccc cgagcttccg ggccaactcg
     1201 ccgagcagac ggtagcgcat ctcgcgcgcc atctcctgga ttcggctttt cggcttctcg
     1261 ccggtccagc tcaggatccg gtgcggcagg ccagccgtcc tggcccactt ggcgaccgcg
     1321 cgcgcctccg ctgccgagtc cgcgcgcagg ccatggtcga ccgtggccac tgtcacgcgc
     1381 gggcggccgc ccctctcgcg ccagccggag atcaggtgca tgaggcacac ggaatccggc
     1441 ccgccggaga ccgccaggat gatccccgtc gcctgctcga gaccggcgaa gagggcatcc
     1501 gcctcgtcat ggccgacggg cgccacgtcg cgatccccgg atgcccgact ctcgccgtgt
     1561 cgggagcccg cgtcggctgg gccgggcggc gtgcgcgagc ggcgcacggt ctgcctcaaa
     1621 cgcagcgggc gcgcttctgc tcgcgctcga cgccctggcg cacggtcggc gccgcctgcg
     1681 ggaacttgcg ctcgagctgt gcgaaggtgg cgcaggcctg atccttggcg ccgagcgcgt
     1741 tgagggtgat gccgaggcgc agcatggcgt caggggcccg ttgcgagctg gtgtattcgg
     1801 tggacacctt caggaactgc tcggccg
//
LOCUS       DATAIQ010000760         2688 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_63917, whole genome shotgun sequence.
ACCESSION   DATAIQ010000760 DATAIQ010000000
VERSION     DATAIQ010000760.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2688)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2688)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2688
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_63917"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..705)
                     /locus_tag="VHN20_12575"
     CDS             complement(<1..705)
                     /locus_tag="VHN20_12575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012322308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DnaB-like helicase N-terminal domain-containing
                     protein"
                     /protein_id="HEX2726646.1"
                     /translation="MAPANALVARLETHTPDYRVAPNNIDAEQALLGAILVNNDAYYR
                     ISDFLEPAHFFEDLHRRIFEVASSLIRAGKVATPITLKTFLGDQDLGGVTVSQYLARL
                     AAEATTVINAEAYGRAIYDLAIRRSLIGIGEDMVNVAYDAPVETSPRDQIEETERRLY
                     ELAEKGRYDGGFQRFSEALTTAIDMAAAAYKRDGGLSGISTGLRDLDHNMGGLQRSDL
                     IVLAGRPAMGKTALATN"
     gene            complement(917..1480)
                     /gene="rplI"
                     /locus_tag="VHN20_12580"
     CDS             complement(917..1480)
                     /gene="rplI"
                     /locus_tag="VHN20_12580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014889831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HEX2726647.1"
                     /translation="MEVILLERVAKLGQMGDTVRVRDGFARNFLLPRGKALRATKVNK
                     ERFETQRSQLEARNLERRTEAEAVGGKLDGQSFTIIRQAGETGVLYGSVSSRDLAEAL
                     TTGGFSVGREQLVLNAPIKALGLHAVPVALHPEVEVRVTINVARSPEEAERQARGETV
                     TTREETNLDDLGLEVGAALAEAGPMEA"
     gene            complement(1508..2473)
                     /locus_tag="VHN20_12585"
     CDS             complement(1508..2473)
                     /locus_tag="VHN20_12585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726648.1"
                     /translation="MVNLLVGILAGLVSALLAATVTAGPPLGVLAYLTPLPILIGALG
                     WNHRSGLVAAAAGAFAVALAFAPEAGLAFLAGAMTIWWLAYLTLLGRPGPDGSLEWYP
                     LGRLLLWITACSALLTLVVPIIRGVWDYDTYHAAAKVAAEASLRFYLRVPGGVPLPSA
                     LGGVPSDRLVEAMATALPFVASAFCTLVLTLNVWVAARTVAISGRLPRPWPAIARTRM
                     PQSALAPMALAVAAAFLAGFTGIVALTVAGALAMAFALLGLALLHDVSRGRPGRAGLL
                     VGAYLLVALLSHAVLPLLALAGMADTAVDLRRRLAPGGSGPRSST"
     gene            complement(2501..>2688)
                     /locus_tag="VHN20_12590"
     CDS             complement(2501..>2688)
                     /locus_tag="VHN20_12590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726649.1"
                     /translation="SSVPIRDGDWLYWWAFTPGDQYRRWWRRPGATEEDKAGPHPDPL
                     PQAGEGEKSLGRTVILP"
BASE COUNT          429 a          903 c          967 g          389 t
ORIGIN      
        1 gttggtggca agcgccgtct tgcccatggc gggacggccg gcaaggacga tcaggtcgga
       61 gcgctgcagg ccgcccatat tgtggtcgag atcacgaagc cccgtcgaga tgcccgacag
      121 gccgccgtcg cgcttgtagg cggcggccgc catgtcgatg gccgtcgtca acgcctcgga
      181 gaagcgctgg aagccgccgt catagcggcc cttctcggca agctcgtaga ggcggcgctc
      241 ggtttcctcg atctggtcgc gcggggatgt ctcgaccggc gcgtcatagg cgacgttgac
      301 catgtcctcg ccgatgccga tcaggctgcg ccggatggcg aggtcgtaga tcgcgcggcc
      361 gtacgcctcg gcgttgatca ccgtggtcgc ctcggcggcg aggcgcgcca gatattgcga
      421 gaccgtgacg ccgccgaggt cctgatcgcc gaggaacgtc ttgagggtga tcggcgtcgc
      481 gaccttgccc gccctgatca ggctgctcgc cacttcgaag atgcgccggt gcaggtcctc
      541 gaagaaatgc gccggctcga gaaaatccga gatgcggtaa taggcgtcgt tgttgacgag
      601 gatcgccccg agcagcgcct gttcggcatc gatgttgttg ggcgccaccc ggtagtcggg
      661 cgtgtgcgtc tcgaggcggg caacgagggc gttggcgggg gccatctcaa attccgtttg
      721 ggaggatcgg cgagtctagt tcggcggcgc ggcaaggcta ccgcccgcgc gccgctgtcc
      781 ccgattcgca cactgctccc gctcgacttt cacaccggcc ttgacagagc gttgcggagt
      841 ccgcgcccgg acaagaaaaa gggcgcgccc gattcgcatc gggcgcgccc atcttagaac
      901 aaaacgggaa cgatgatcaa gcttccatcg gtccggcttc cgcgagggcg gcgccgacct
      961 cgaggccgag atcgtcgagg ttggtctcct cgcgcgtcgt gaccgtctcg ccgcgcgcct
     1021 ggcgctcggc ttcctcgggg ctgcgcgcca cgttgatcgt cacgcgcacc tcgacctccg
     1081 gatgcagcgc caccggcacg gcatgcaggc cgagcgcctt gatgggggcg ttgagcacca
     1141 gctgctcgcg cccgacgctg aacccgccgg tcgtcagggc ttcggcgaga tcgcggctcg
     1201 agacggagcc gtagaggacg ccggtctcgc cggcctggcg gatgatcgtg aagctctgtc
     1261 cgtcgagctt gcctcccacc gcctccgcct cggtgcggcg ttcgaggttg cgcgcctcga
     1321 gttgcgagcg ctgcgtctcg aaacgctcct tgttgacctt ggtggcgcgc agggccttgc
     1381 cgcgcggcag caggaaattg cgcgcgaagc cgtcgcgcac gcgcacggtg tcgcccatct
     1441 gtccgagctt ggcgacgcgt tccagcagga tcacttccat aattgtctcc tttgagttga
     1501 tgactgatca ggttgacgat cgaggcccag agccgccggg cgcaagacgc cggcgcaggt
     1561 cgacggccgt gtcggccatg ccggcgagcg ccagcaacgg caggacggcg tggctgagca
     1621 gggcgacgag gaggtaggcg ccgacgagca ggccggcccg gcccgggcgt ccccgcgaga
     1681 cgtcgtgcag cagcgcgagg cccagcaacg cgaaggccat cgccagggcc ccggcaacgg
     1741 tcagcgcgac gatccccgtg aacccggcca ggaacgcggc ggcgaccgcg agcgccatcg
     1801 gcgcgagcgc cgattgcggc atcctggtgc gtgcgatggc cggccagggg cgcggcaacc
     1861 ggccggagat cgcgacggtc cttgccgcca cccagacgtt gagcgtgagc accagggtgc
     1921 agaatgccga tgcgacgaac ggaagggcgg tcgccatcgc ctcgaccagc cggtcgctgg
     1981 gaaccccgcc cagcgcggac ggcagcggca cgccgcccgg cacgcgcagg tagaagcgca
     2041 gggaggcctc ggccgcgacc ttggcggccg catgataggt atcgtagtcc cagacccccc
     2101 tgatgatcgg aacgaccagg gtgagcaggg ccgagcaggc ggtgatccag agcagaagcc
     2161 ggccgagcgg gtaccactcg agcgagccgt cgggacccgg ccgtccgagg agcgtcaggt
     2221 aggcaagcca ccagatcgtc atggcgccgg ccagaaaggc caggccggcc tccggcgcga
     2281 aggcgagcgc caccgcgaag gcgccggccg cggccgcgac caggcccgag cggtggttcc
     2341 agccgagggc cccgatcagg atcggaagcg gcgtcaggta ggccagcacg cccaaaggcg
     2401 gccctgccgt caccgtggcg gcgagcagcg cagagaccag gccggcgagg atcccgacga
     2461 gaaggttgac catgacgctg tcccgctgcc tttcgcaggg ttaggggagg atcacggtcc
     2521 gccccagcga tttttctccc tctcccgctt gcgggagagg gtcggggtga gggcctgcct
     2581 tgtcctcttc cgtcgcgccc ggccgccgcc accaccgccg atactgatcg ccgggcgtga
     2641 acgcccacca gtagagccag tcgccgtcgc ggatcgggac cgaggaat
//
LOCUS       DATAIQ010000761         1580 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_132297, whole genome shotgun sequence.
ACCESSION   DATAIQ010000761 DATAIQ010000000
VERSION     DATAIQ010000761.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1580)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1580)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1580
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_132297"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..775
                     /locus_tag="VHN20_12595"
     CDS             <1..775
                     /locus_tag="VHN20_12595"
                     /inference="COORDINATES: protein motif:HMM:NF017964.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="amylo-alpha-1,6-glucosidase"
                     /protein_id="HEX2726650.1"
                     /translation="HHVRGTRFGIGVDPADGLLRQGAEGYQLTWMDAKVDGWVVTPRR
                     GKAVEINALWYNALRLLARWSEEEGLPVTGLDLGSIAERTREAFNRRFWSDELGHLFD
                     VVDGEQGDDPACRPNQLLAIAPRYPVLDRGRWEAVVRVCRERLVTPVGLRSLAPGHPD
                     YKAKYYGDLRSRDAAYHQGTVWAWLIGPFIDAWLKVYPEDAAGARGLLQGFMAHLDEG
                     AIGSISEIFDAEAPYTQRGCVAQAWSVAEVLRCWAKTAG"
     gene            807..1565
                     /locus_tag="VHN20_12600"
     CDS             807..1565
                     /locus_tag="VHN20_12600"
                     /EC_number="3.1.3.48"
                     /inference="COORDINATES: protein motif:HMM:NF039343.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004725 - protein tyrosine phosphatase
                     activity [Evidence IEA];
                     GO_function: GO:0030145 - manganese ion binding [Evidence
                     IEA];
                     GO_process: GO:0045227 - capsule polysaccharide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CpsB/CapC family capsule biosynthesis tyrosine
                     phosphatase"
                     /protein_id="HEX2726651.1"
                     /translation="MIDTHTHFLPGLDDGPATLEESLALIRAAAANGITAMVATPHAN
                     HQYEFDAGRTAAALAEVRAASDAGVALYSGCEVHLSAQNIERVLRDPRPYAMNQAGYL
                     LVEFSDFAIPPAASDIFTRLMDAGVRPVIAHPERNALLRADTARLRAWVAQGAVLQIT
                     ASSLFERFGKAARASSIELLRLGLVQLVSSDAHDTVHRPPELAEAREFVNRRFGDEMA
                     EELFVRNPAAVVAGDHIGPPPAPRPRRRWLPFWS"
BASE COUNT          230 a          505 c          568 g          277 t
ORIGIN      
        1 gcaccacgtc cgcggcacgc gcttcggcat cggcgtggac cccgccgacg gcctcttgcg
       61 ccagggggcc gagggctacc agctcacctg gatggacgcg aaggtcgacg gatgggtcgt
      121 gacgccgcgg cgtggaaagg cggtcgagat caacgccctc tggtacaacg ccctgcggct
      181 gctcgcccgc tggtccgaag aagagggcct gccggtgacc gggctcgacc tcggcagcat
      241 tgccgaacga acccgggaag cgttcaatcg ccgcttctgg tctgacgagt tggggcactt
      301 gttcgacgtc gtcgacggcg agcagggtga cgatcccgcc tgccgtccca atcagttgct
      361 cgcgattgcg ccgcgctatc cggtgctcga ccgcggccgg tgggaggcgg tggtgcgcgt
      421 ctgccgggag cgtctggtga cgccggtcgg gctgcggtcg ctcgcgcccg gacatcccga
      481 ttacaaggcg aagtattacg gcgatttgcg ctcgcgcgat gccgcctatc atcaggggac
      541 ggtgtgggcg tggctgatcg gacccttcat cgatgcgtgg ctgaaggtct atccggagga
      601 tgcggcgggg gcgcgcggtc tcctgcaggg attcatggcg cacttggatg agggggcaat
      661 cgggtcgatc agcgagatct tcgatgccga ggcgccctat acccaacgcg gctgcgtcgc
      721 acaggcctgg agtgtcgccg aggtgctccg ctgctgggcg aagacggcag ggtgagagcg
      781 ccgggtacga ttgaggtcgt cccgccgtga tcgataccca tacccacttt ctacccggtc
      841 tcgacgacgg tccggcgacg ctcgaggagt ctctcgcgct gatccgtgcc gccgccgcca
      901 acggcatcac ggccatggtg gcgacgccgc acgccaatca tcaatatgaa ttcgatgccg
      961 ggcgaacggc cgcggcgttg gcggaggtgc gcgctgcgtc cgacgcgggc gtcgcgctct
     1021 actccggctg cgaagtgcat ttgagcgctc agaatatcga gcgcgtgctg cgtgatccgc
     1081 ggccgtacgc catgaatcag gcggggtacc tgctggtcga gttctccgac ttcgcgattc
     1141 cgccggcggc gagcgacatc ttcacgcgtc tcatggacgc cggggtgcgg cccgtgatcg
     1201 cgcaccccga acgcaatgcg ctgctgcgcg ccgatacggc acggctgcgg gcgtgggtcg
     1261 cgcagggagc ggtcctgcag atcaccgcgt cttcgttgtt tgagcgcttc gggaaggcgg
     1321 cgcgcgcctc gtccatcgaa ctgctgcgtc tgggcttggt gcagctcgtg tcgagtgacg
     1381 cgcacgatac ggtccatcgt cctcctgagc tggccgaggc gcgcgagttc gtcaaccgcc
     1441 ggttcggcga cgaaatggcg gaagagctgt tcgtgcgcaa tccggcggcg gtcgtggcgg
     1501 gggaccatat cggcccacca ccggctccca ggccgaggcg gcgctggctg ccgttctggt
     1561 cctaggccgc aaattctctg
//
LOCUS       DATAIQ010000762         6630 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_316680, whole genome shotgun sequence.
ACCESSION   DATAIQ010000762 DATAIQ010000000
VERSION     DATAIQ010000762.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 6630)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6630)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6630
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_316680"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            152..874
                     /locus_tag="VHN20_12605"
     CDS             152..874
                     /locus_tag="VHN20_12605"
                     /inference="COORDINATES: protein motif:HMM:NF012804.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HEX2726652.1"
                     /translation="MAKLDLVLEELVTANRILAREEVVDSFGHVSVRHPDRPDRYLLS
                     RARAPDCIEVDDIMEFTLEGEAVDARDRKPYLERFIHGAIYEGRPDVQAVVHNHSPSV
                     IPFGVTGQKLKPLLHMCASIGHDVPTWDSQAKFGDTTLLVENMEMGRDLVASLGRGRT
                     ALMRGHGAVAVAPNLRQAVFVSVYLELAAKLQMQALPLGNVKYLTDGEVEKIINRTGP
                     YTIDRAWENWCRRAGRPMTKSA"
     gene            914..1930
                     /locus_tag="VHN20_12610"
     CDS             914..1930
                     /locus_tag="VHN20_12610"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEX2726653.1"
                     /translation="MARARLILSLLGLAALACAGPAAAQDDFYKGKTVEIIVGFGPGG
                     GYDTYARALGQFLPKHLPGQPTVIVKNMPGAGSLTLVNYLVNIAPKDGTSFGTFDQSL
                     ILAPLFGGDAAKFDASKLSWVGSIAKGNTVCITWHTAEVKSWDDLTKKKAVFGGTGRE
                     DVRYTHAAMLRNMFGADLKIVTGYKGSSDLRIAMERGEIDGTCGDSWTSLKSTAADWV
                     RDKKINILVQFALDTHPDVRDVPLLTEKARTDEDRAALKLLFAAQVAGRPFAGPPGVP
                     AERLAVLRAAFDATMKDPEFLAFTERARLEVDAVGGRAIEALVGEVYQTPPAVIARAK
                     AVRE"
     gene            1961..2659
                     /locus_tag="VHN20_12615"
     CDS             1961..2659
                     /locus_tag="VHN20_12615"
                     /inference="COORDINATES: protein motif:HMM:NF013053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine hydrolase"
                     /protein_id="HEX2726654.1"
                     /translation="MHHFDMPDWAIQQAVSRRGRVHVFDKPDPLRTALLVIDMQNAFL
                     MDSVAHSPIPMARSIVPNINRTAHALREAGGLVAWITTVVTEESLVDWSVCNDDLSTP
                     QRRQKRYEAMREGSMGQELWPDLDARPGDARIKKTRYSALIQGSSPLEEFLRERSIDT
                     LIVTGTVTGVCCESTARDAMMLNFKTIMISDGCAARSDADHAAALVSFYVTFGDVMTT
                     DEVLACLAKRAQSQ"
     gene            2819..3826
                     /locus_tag="VHN20_12620"
     CDS             2819..3826
                     /locus_tag="VHN20_12620"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEX2726655.1"
                     /translation="MALVAAAAAIVAATSASASDVADFYRGKTVNIIVGFGPGGGYDL
                     YARLLARHLGKHIPGNPSVVVQNMDGAGGVRAANHVYNVAPKDGTVMAGVNQGAAMYK
                     LLGGKGAQYEPARFQWIGSMASSNNTIYVWHSSGIRSLDDAKAREVSMAGSGVISDAN
                     IYPAVFNALAGTKFKVISGYPGTNESNLAIERGEVEGRGGGAYSSLVSTRPDWLRDRK
                     VNVIAQIGFEKEPDLADVPLLLDLMKTDEQRQIATLVTLPTAIGYNHWVAPEVPADRV
                     AALRAAYAAALKDPELLADAKKQSFEIRYKSGQDLEAMVRKAADTPKPILEKTAAILG
                     W"
     gene            complement(3964..6252)
                     /locus_tag="VHN20_12625"
     CDS             complement(3964..6252)
                     /locus_tag="VHN20_12625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011441984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEX2726656.1"
                     /translation="MRTLNTYIGSSVERVEDARFLRGRGEYIGDLNRDGQWHAAFLRS
                     PVAHGRIRSIDASAALAMPGVRAVVTAADIEGKIPTIPFRRPNPTIGPYAQPIIAREK
                     VRYVGEPVAVVLADSAELAEDAVQEIVLDIEPLPAVVDRHSAAANKILLFDETGSNLA
                     SVFVADKGDVDAAFRNAAYVLRDQEFSTQRQTALPMETRGLLAEWDAKAQRLTMSGAA
                     KLPFFNRKTMAAMMGLKEQAVDYIELDVGGGFGARGEFYPEDFLTALAARKFGRPIKW
                     VEDRREHFSAIGHSREAACKVDMAFARDGTILGLRGELYVNIGAYVRPNGMTPVRNAA
                     QFMSGPYRIPNIHLEAHALVSNKTPAGTYRGPGRYEGCFFTERMLHIAARELGLDPLT
                     IRRRNLLTQEEMPYPLAPVLPSDGRAETACDSGDHRVTFDRCIVESKWHEKAHLQGKL
                     VDGRYHGLGIGCFIEGGASGPQENARMQVERDGSVSVYAGSSAIGQGLETILAQIAAD
                     ALEIPLERVRIYHGSTTYLHEGWGSYGSRGTVMGGSAILDVAEKLLEKFRVAAAARLS
                     LPPDDVRVADGVARAPDGRSVPLAEVAEGLGADGSFKNSTPTYTYGTAAAHVAVDAKT
                     GHVEVLDYVVVDDVGRIINPLTLHGQVMGAAVQGLGSVFGEDLLYDENGQLLVGSLAD
                     YIIPVATDYPHVHCVSMESYPSPTNPLGAKGAGEGGIIPVGGVVSNAIAAALSSLGVE
                     PRHLPLSPPRLWALIQEAGKQN"
     gene            complement(6249..>6630)
                     /locus_tag="VHN20_12630"
     CDS             complement(6249..>6630)
                     /locus_tag="VHN20_12630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011441985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HEX2726657.1"
                     /translation="HLGCEHGVCGACTVIVDGEAVRACLMLAVQAEGAKVVTVDGLSH
                     DDALTPLQSAFKTPHALQCGFCTPGMITTLHALLSEEPFADEERIRDVLSGNLCRCTG
                     YIPIVEAALEARAAYQAQAAGTAA"
BASE COUNT         1117 a         2207 c         2271 g         1035 t
ORIGIN      
        1 agcgagcaga gctccgcgaa ataacctcca gttgcgagcc gtccacgtag aatgcgcgga
       61 atggttccgg ctggtcatcg cgcgaagcct tggctagata gcggcgtcca tgcttgaggg
      121 agcggcgtgg gcgcgaaagg aacgtgtgtc gatggcaaag cttgatctgg tcctggaaga
      181 actcgtcacc gccaacagaa ttctggcgcg cgaagaggtg gtcgactcgt tcggccatgt
      241 cagcgtgcgt catccggacc ggcccgaccg ctatctgctc tcgcgcgccc gggctcccga
      301 ctgcatcgag gtcgacgaca tcatggaatt cacgctcgag ggcgaggcag tcgacgcgcg
      361 cgaccgcaag ccgtacctcg agcgcttcat ccacggcgcc atttacgaag gccgcccgga
      421 cgtgcaggcg gtcgtgcaca accacagtcc gagcgtgatc ccgttcggcg tcacgggcca
      481 gaagctcaag ccgctgctgc acatgtgcgc gtcgatcggc catgacgtgc cgacgtggga
      541 ctcgcaggcc aagttcggcg acaccaccct gctcgtcgag aacatggaga tggggcgcga
      601 tctcgttgct tccctcggac gcgggcgcac cgccctgatg cgcggccacg gcgccgtcgc
      661 ggtcgccccc aacctgcggc aggcggtgtt cgtctcggtc tatctcgaac tcgcggccaa
      721 gctgcagatg caggcgctgc cgctcggcaa cgtcaaatac ctgaccgacg gcgaggtcga
      781 gaagatcatc aaccgcaccg gcccatacac gatcgaccgg gcctgggaga actggtgccg
      841 gcgcgccggc cggccaatga cgaagtcggc ctgatttttc gctgcagcgc cgaccgcgca
      901 tgacgaggac agcatggcga gagcaagatt gatcctgtcg ctcctgggcc tggccgcgct
      961 ggcatgcgcc ggtcccgccg cagcccagga cgacttctac aagggcaaga cggtcgagat
     1021 cattgtcggc ttcggaccgg gcggcggcta cgacacctac gcacgcgcgc ttgggcagtt
     1081 cctgcccaag cacctgccgg ggcagccgac ggtgatcgtg aaaaacatgc cgggggccgg
     1141 cagcctcacg ctggtcaatt acctcgtcaa catcgcgccc aaggacggca ccagcttcgg
     1201 caccttcgac cagagcctga tcctggcgcc gctgttcggc ggcgacgcgg caaagttcga
     1261 cgccagcaag ctgagctggg tcggcagcat cgccaagggc aacacggtgt gcatcacctg
     1321 gcacacggcc gaggtgaaga gctgggacga cctgacgaag aagaaagccg tgttcggggg
     1381 caccggacgg gaggacgtgc gctacacgca tgccgccatg ctgcgcaaca tgttcggcgc
     1441 cgatctcaag atcgtcaccg gctacaaggg cagcagcgac ctgcgcatcg ccatggagcg
     1501 cggcgagatc gacggcacgt gcggtgattc ctggaccagc ctcaagagca cggccgcgga
     1561 ctgggtgcgc gacaagaaga tcaacatcct ggtgcagttc gcgctcgaca cgcatcccga
     1621 cgtccgcgat gtgccactgc tgaccgagaa ggcgcgcacc gacgaggacc gcgcggcgct
     1681 caagctgctg ttcgcggcgc aggttgccgg ccggcccttc gccgggccgc cgggcgtgcc
     1741 ggcggagcgt ctcgcggttc tgcgggccgc cttcgacgcc accatgaagg atcccgagtt
     1801 cctggccttt accgagcgcg ccaggctcga ggtcgacgcg gtgggcgggc gcgccatcga
     1861 agccctggtg ggcgaagtct atcagacgcc gccggccgtg atcgcgcggg ccaaggccgt
     1921 gcgggagtag gattcgcgag agcctccgac aggcgctgcc atgcatcact tcgacatgcc
     1981 cgactgggcc atccagcagg ccgtctcgcg gcgcggccgg gtgcacgtct tcgacaagcc
     2041 ggacccgcta aggacggcgc tgctcgtcat cgacatgcag aacgcgttcc tgatggacag
     2101 cgtggcgcac agccccatcc cgatggcgcg ctcgatcgtg cccaacatca accgcaccgc
     2161 ccatgccctg cgcgaagccg gcggtctcgt ggcgtggatc accaccgtcg tcaccgagga
     2221 gtcgctggtc gactggtcgg tatgcaacga cgacctctcg accccgcagc ggcggcagaa
     2281 acgctacgag gcgatgcgcg agggatcgat ggggcaggag ctgtggcccg atctcgatgc
     2341 gcggcccggc gacgcgagga tcaagaagac ccgctacagc gccctgatcc agggctcgtc
     2401 gcccctcgag gaattcttgc gcgagcgcag catcgacacg ctgatcgtga ccggcaccgt
     2461 gacgggcgtg tgctgcgagt cgacggcgcg cgacgccatg atgctcaatt tcaagaccat
     2521 catgatctcc gatggctgcg ccgcgcgcag cgatgccgat catgctgccg ccctggtctc
     2581 gttctacgtc accttcgggg acgtcatgac cactgacgag gtcctggcct gcctcgcgaa
     2641 gcgcgcgcaa agtcagtagt cgacggtgcc tgctccagga gcatcgctga cgctcgcacc
     2701 tgggcattcg gtcggagttg tccggttgac aggcaggcca tcctgaggct cgctcgggac
     2761 cagataaaca gggagaacac gcacaatgag agcgtggggt ggcggtatca gcagatgctt
     2821 ggcgctcgtc gccgcggcgg cggccattgt cgccgccacg tcggcctcgg cgtcggacgt
     2881 ggccgatttc taccgcggca agaccgtcaa catcatcgtc gggttcggcc cgggcggcgg
     2941 ctacgacctt tacgcgcggc tgctggcgcg ccatctgggc aagcacattc cgggcaatcc
     3001 gagcgtggtc gtccagaaca tggatggcgc cggtggcgtg cgtgccgcca accacgtcta
     3061 caacgtggcg ccgaaggacg gcaccgtgat ggccggcgtc aaccagggcg ccgcgatgta
     3121 caagctgctc ggcggcaagg gcgcgcaata cgagccggcc aggttccaat ggatcggcag
     3181 catggcctcg tcgaacaaca cgatctacgt gtggcacagc tccggcatca gatcactcga
     3241 cgacgccaag gcgcgcgagg tgtcgatggc cggcagcggc gtgatctccg acgccaacat
     3301 ctatccggcg gtcttcaacg cgctcgccgg aaccaagttc aaggtgatca gcggctaccc
     3361 cggcaccaac gagagcaacc tggcgatcga gcgcggcgag gtcgaaggcc ggggcggcgg
     3421 cgcatattcg agcctcgtct cgacccgccc cgactggctg cgcgaccgca aggtcaacgt
     3481 catcgcgcag atcggcttcg agaaggagcc ggacctcgcc gacgtgccgc ttctgctcga
     3541 cctgatgaag accgatgagc agcggcagat cgcgacgctg gtcacgctgc ccaccgccat
     3601 cggctacaac cattgggtcg cgcccgaggt cccggcagac cgtgtcgcgg cgttgcgcgc
     3661 cgcctatgcc gcggcgctca aggacccgga gcttctcgcc gacgccaaga agcagagttt
     3721 cgagatccgc tacaagtccg gccaggacct cgaggcgatg gtcaggaagg cagccgacac
     3781 gccgaagccg atcctggaga aaaccgccgc gatcctggga tggtgatccc tctcattcga
     3841 tgacattccg gggcggcgcg taagcgccca acccggaacc cacgattaat tacaacgctg
     3901 cggttactgt cgcggcaagt cgtggttccg ggttgctcgc tgtgctcggc ccgggaatga
     3961 cgtctagttt tgcttgcctg cttcctggat cagcgcccac aggcgcggcg gggagagcgg
     4021 caggtggcgc ggctcgacgc cgagtgagct cagggccgcg gcgatggcgt tgctgacgac
     4081 gccgccgacc gggatgatgc cgccttcgcc ggcgcccttg gcgccgagcg gatttgtggg
     4141 cgaggggtac gactccatcg agacgcagtg cacgtgcgga tagtcggtgg cgaccgggat
     4201 gatgtagtcc gccagcgagc cgaccagcag ctggccattc tcgtcgtaga gaaggtcttc
     4261 gccgaacacg ctgccgaggc cctgcaccgc cgcacccatg acctgcccgt gcagggtgag
     4321 cgggttgatg atgcggccga cgtcgtcgac gaccacgtag tcgagcacct ccacatggcc
     4381 ggtcttcgca tcgaccgcca catgcgcggc ggcggtgccg taggtgtagg tcggcgtcga
     4441 gttcttgaag ctgccgtcgg cgccgaggcc ttcggcgacc tcggcgagcg gcaccgagcg
     4501 gccgtccggc gcgcgcgcga cgccgtcggc gacccgaacg tcgtccggcg gcaggctcaa
     4561 gcgcgctgct gcggcgacgc ggaatttctc gagcagcttt tcggcgacat cgaggatcgc
     4621 cgagccgccc atcaccgtgc cgcgggagcc gtaggacccc cagccctcgt gcaggtaggt
     4681 ggtcgagcca tgatagatgc gcacccgctc gagcgggatc tcgagggcgt cggcagcgat
     4741 ctgcgccagg atcgtctcga ggccctggcc gatggccgac gagccggcat agaccgacac
     4801 ggagccgtcc cgctcgacct gcatacgggc gttctcctgc ggaccggagg ccccgccctc
     4861 gatgaagcag ccgatgccga ggccgtggta gcggccgtcg accagcttgc cctgcagatg
     4921 cgccttctcg tgccacttcg attcaacgat gcagcggtcg aaggtgacgc ggtggtcgcc
     4981 gctgtcgcag gcggtctcgg cgcggccgtc gcttggcagc accggcgcca gcggatacgg
     5041 catctcctcc tgcgtgagca ggttgcgtcg ccggatcgtc aacgggtcga ggccgagctc
     5101 gcgcgccgcg atgtgcagca tgcgctcggt gaagaagcag ccctcgtagc ggccgggacc
     5161 gcgatacgtg cctgctggcg tcttgttgct gacgagcgcg tgcgcctcga gatggatgtt
     5221 gggaatgcgg tacggcccgg acatgaactg cgcggcgttg cgcaccggcg tcatgccgtt
     5281 cggccgcaca taggcgccga tgttgacgta aagctcgccg cgcaggccga gaatggtccc
     5341 gtcgcgggcg aaagccatgt cgaccttgca ggccgcctcg cgcgagtggc cgatcgcgga
     5401 aaaatgctcg cgccggtcct cgacccactt gatcgggcgc ccgaacttgc gcgccgccaa
     5461 ggccgtgagg aagtcttccg ggtagaactc gccgcgtgcg ccgaaaccgc cgccgacgtc
     5521 gagctcgatg tagtcgaccg cctgctcctt gaggcccatc atggcggcca tggtcttgcg
     5581 gttgaagaac ggcagcttcg ctgcgcccga catggtgagg cgctgcgcct tggcgtccca
     5641 ttcggcgaga agcccgcgcg tctccatcgg cagcgccgtc tggcgctggg tgctgaattc
     5701 ctggtcgcgc agcacgtagg cggcattgcg gaaggcggcg tcgacgtcgc ccttgtcggc
     5761 cacgaacacg gacgcgagat tgctgccggt ctcgtcgaac aggaggatct tgttcgcggc
     5821 cgcagagtgg cggtcgacca cggccggcag cggctcgatg tcgagcacga tctcctgcac
     5881 tgcatcctcg gcgagctcgg cgctgtcggc gagcaccacc gccacgggtt cgccgacata
     5941 gcgcactttc tcgcgcgcga tgatcggttg ggcgtaggga ccgatggtcg ggttggggcg
     6001 ccggaacggg atggtcggga tcttgccctc gatgtccgcg gcggtgacga ccgcgcgcac
     6061 gcccggcatg gcgagcgcgg cgctcgcgtc gatcgaccgg atgcgcccgt gtgcgaccgg
     6121 gctgcgcagg aaggcggcgt gccactggcc gtcgcggttc aggtcgccga tatactcgcc
     6181 gcgcccgcgc aggaagcgtg cgtcctcgac gcgctcgacg gagctgccga tataggtgtt
     6241 gagcgtcctc acgctgccgt ccccgccgct tgcgcctgat aggccgcacg ggcttccagc
     6301 gccgcttcga caatcgggat gtagccggtg cagcggcaca gattgccgga cagcacgtcg
     6361 cgaatgcgct cctcgtcggc gaacggctcc tcgctcagaa gggcgtgcaa ggtcgtgatc
     6421 atgccggggg tgcagaagcc gcattgcagc gcgtgaggtg tcttgaacgc gctctgcagc
     6481 ggcgtcagcg catcgtcatg cgacaggccg tcgaccgtca ccaccttggc gccttccgcc
     6541 tgcacggcga gcatcaggca ggcgcgcacg gcctctccgt cgacaatcac ggtgcaggcc
     6601 ccgcagacgc cgtgctcgca gccgagatgc
//
LOCUS       DATAIQ010000763         1803 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_409109, whole genome shotgun sequence.
ACCESSION   DATAIQ010000763 DATAIQ010000000
VERSION     DATAIQ010000763.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1803)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1803)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1803
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_409109"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            266..1522
                     /gene="rho"
                     /locus_tag="VHN20_12635"
     CDS             266..1522
                     /gene="rho"
                     /locus_tag="VHN20_12635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008191409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0008186 - ATP-dependent activity, acting
                     on RNA [Evidence IEA];
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HEX2726658.1"
                     /translation="MHLKDLKQKSPADLVAMAEELGVEGASTMRKQDLMFSILKERAE
                     SGAEIMGMGTIEVLNDGFGFLRSPEANYLAGPDDIYVMPGIVRKFGLRTGDTIEGEIR
                     APKDGERYFALTKVNQINFDDPEAVRHRVNFDNLTPLYPDQKLKLDTLDPTIKDKSAR
                     VIDIVAPLGKGQRALIVAPPRTGKTVLLQNIARAITDNNAEVFLIVLLIDERPEEVTD
                     MQRSVNGEVISSTFDEPASRHVQVAEMVIEKAKRLVEHSRDVVILLDSITRLGRAYNT
                     VVPSSGKVLTGGVDANALQRPKRFFGAARNIEEGGSLTIIATALIDTGSKMDEVIFEE
                     FKGTGNSEIVLDRKVSDKRIFPSLDVGKSGTRKEELLVEQGTLSKMWVLRRILMQMGT
                     VDAMQFLLDKMKDAKSNEDFFASMNQ"
     gene            1602..>1803
                     /locus_tag="VHN20_12640"
     CDS             1602..>1803
                     /locus_tag="VHN20_12640"
                     /inference="COORDINATES: protein motif:HMM:NF015686.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HEX2726659.1"
                     /translation="MISGLNFHAIFTAGGMAKLGQIIVGDLTMAGDNVVIMGSLASGL
                     PPAQRKKVLLLGVGMALVFLITF"
BASE COUNT          345 a          614 c          550 g          294 t
ORIGIN      
        1 gaacgagatt cccggcatcg ccgcagcgct gatcgtcgtg ctcgtcatcg tgcgtccctt
       61 ttaagggagt gcacgcacca acgcgttcgt ccattctgag gggctggccg gcgattcctc
      121 atattgacta aggcgccggc cctcccctaa cgccgcagcc gacggccgcg ccggcccgtc
      181 ttcttcccgc cggtgcgacc agcccactct cgcggcgtcc tgccgcggct gttcgtcccc
      241 gccatttcga gcgaagtcac accccatgca cctcaaggac ctcaagcaga aatcccccgc
      301 cgacctcgtc gcaatggccg aggagctcgg cgtcgagggc gcgtcgacga tgcgcaagca
      361 ggacctcatg ttctcgatct tgaaggagcg cgccgagagc ggcgccgaga tcatgggcat
      421 gggcacgatc gaggtgctga acgacggctt cggcttcctc cgcagccccg aagcgaatta
      481 cctggccggc cccgacgaca tctacgtcat gcccggcatt gtgcggaagt tcggccttcg
      541 caccggcgac acgatcgagg gcgagatccg cgcgcccaag gacggcgagc gctatttcgc
      601 gctgaccaag gtcaaccaga tcaatttcga cgaccccgag gcggtccgcc accgagtcaa
      661 tttcgacaat ctgaccccgc tctaccccga ccagaaactc aagctcgata cgctcgaccc
      721 gaccatcaag gacaagagcg cgcgggtgat cgacattgtc gcgccgctcg gcaagggcca
      781 gcgcgcgctg atcgtcgcgc cgccgcgcac cggcaagacc gtgctgctgc agaatatcgc
      841 gcgcgcgatc accgacaata atgccgaggt gttcctgatc gtgctgctga tcgacgagcg
      901 gcccgaggaa gtcaccgaca tgcagcgcag cgtcaacggc gaggtcatct cctcgacatt
      961 cgacgagccg gccagccgcc acgtccaggt cgccgagatg gtgatcgaga aggccaagcg
     1021 gctggtcgaa cattcgcgcg acgtggtgat cctgctggat tccatcaccc ggctcgggcg
     1081 cgcctacaac accgtggtgc cgtcctccgg caaagtgctg accggcggcg tcgacgccaa
     1141 tgcgctgcag cggcccaagc gtttcttcgg cgccgcccgc aacatcgagg aaggcggctc
     1201 cctcaccatc atcgccaccg cgctgatcga caccggatcg aagatggacg aggttatctt
     1261 cgaggagttc aagggcaccg gcaacagcga aatcgtgctc gaccgcaagg tcagcgacaa
     1321 gcgcatcttc ccgtcgctcg acgtcggcaa gtccggcacc cgcaaggagg agctgctggt
     1381 cgagcagggc acgctgtcca agatgtgggt gctgcgccgc atcctgatgc agatgggcac
     1441 cgtcgacgcg atgcagttcc tgctcgacaa gatgaaggac gccaagtcga acgaggattt
     1501 cttcgcgtcg atgaaccagt agaccggagc ccgagaccgg gcgcgcttca ggcgtggccg
     1561 gtgaggcgcc gaattccggc cgggagcgtt caagccagat catgatcagc ggcctcaact
     1621 tccacgccat cttcactgcc ggaggaatgg ccaagctcgg ccagatcatc gtcggcgacc
     1681 tcaccatggc cggcgacaat gtcgtcatca tgggcagcct ggcctcaggc ctgccgcctg
     1741 cgcagcgcaa gaaagtgctg ctgctcggcg tcggcatggc gctggttttc ctcataacct
     1801 tcg
//
LOCUS       DATAIQ010000764         2256 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_39417, whole genome shotgun sequence.
ACCESSION   DATAIQ010000764 DATAIQ010000000
VERSION     DATAIQ010000764.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2256)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2256)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2256
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_39417"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..302
                     /locus_tag="VHN20_12645"
     CDS             <1..302
                     /locus_tag="VHN20_12645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HEX2726660.1"
                     /translation="LVAPGGRTVIAPSLMGIREAVRLIGSGPVTVIGSGAPMVTAEAL
                     AVGVDALAPPVPSAPEIAWVARLGLVADPAQALPKPLYLRGPDAKPQDQARLPRR"
     gene            299..787
                     /locus_tag="VHN20_12650"
     CDS             299..787
                     /locus_tag="VHN20_12650"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012333181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX2726661.1"
                     /translation="MSWPSWLRRTPPVVRIVPLAERHARRLADIHASAFARPWTAQDF
                     EQFMAERQISADGLFLGRDGQPSGFALSRRAADEAEILSVAVAREARGRGHGRALLAQ
                     HLQSLAHAGVRTVHLEVEDGNEPALALYRRLGFVEVGRRPGYYLRPDGSRASAITMSR
                     AV"
     gene            854..1321
                     /locus_tag="VHN20_12655"
     CDS             854..1321
                     /locus_tag="VHN20_12655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fur family transcriptional regulator"
                     /protein_id="HEX2726662.1"
                     /translation="MAVQREDIQARRRTADAIETACRERGLRMTGQRRVIARVLGEAE
                     DHPDVVELHRRAATVDDRISLSTVYRTLKLFEAEGIIEKLEFLGGRSRYERAPKEHHD
                     HLINLATGEVLEFRSEEIEALQTEIAKRLGFRLVSHRLELYAVPLQRKGVKTR"
     gene            1332..>2256
                     /locus_tag="VHN20_12660"
     CDS             1332..>2256
                     /locus_tag="VHN20_12660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015951616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HEX2726663.1"
                     /translation="MIAAGVGLRLAVQACAFMVMAPLQVLAARHGWRLAGWLPVWFHR
                     LFLGLFGTRVIVRGRPPQHGATLVLSNHVSWLDIPVLGSLRPLSFVAKSEIAGWPVVG
                     LFARLQRSVFIDRARKSHTASVNTEVGHRLARGDVIVLFPEGTTGDGNRVLPFRSALV
                     GAARAALAEPSLTRINLHPLAITYVRRNGLPVTRRERPAIAWYGDMDLAPHLAAFLRD
                     GPLDAVVHWGEPIPFDSAGDRKRATAEAEAAVREAVYAALRADAGLTPAGAASLFSPR
                     ARALKESRGSTVPAPPLRRRNGREGACLRRPL"
BASE COUNT          318 a          786 c          780 g          372 t
ORIGIN      
        1 agctggtcgc gcccggtggg cggaccgtga tcgccccgag cctgatgggc attcgcgagg
       61 cggtgcggct catcgggtcg ggcccggtca cggtgatcgg atcaggcgcg ccgatggtca
      121 ccgccgaggc cctcgcggtc ggggtcgatg ccctagcgcc accagtcccg tcggctcccg
      181 agatcgcctg ggtggcacgc ctgggccttg tcgctgaccc ggcgcaggcg ctgccgaagc
      241 cgctctacct gcgcgggcct gacgccaagc cccaagacca ggcgcggttg ccgcggcgat
      301 gagctggcct tcctggttgc ggcgcacgcc gccggtcgtg cgcatcgtgc ccctcgcgga
      361 acgccatgcc cggcgcctcg ccgacatcca tgccagcgcg ttcgcccggc cgtggacggc
      421 gcaggatttc gaacagttca tggccgagcg ccagatcagc gctgatggcc tttttctggg
      481 ccgcgacggt cagccgtccg gcttcgcgct gtcgcgacgg gcggccgacg aggcagagat
      541 cctcagcgtc gccgtggcgc gcgaggcgcg cggccggggg cacggccggg ccctcctggc
      601 tcagcacctg caaagcctgg cgcatgcggg cgtgcggacc gtccatctcg aggtcgagga
      661 cggcaacgag cccgcgctgg cgctttatcg gcgcctcggc ttcgtcgaag tcggccggcg
      721 acccggctat tacctgaggc ccgacggcag ccgggcgagc gcgataacca tgagtcgggc
      781 ggtgtgacat ggctcgatgg acgggcgagg ccgctcttct tatatattgc ctgggtctgg
      841 aacggacgtg atcgtggcgg tgcagcgcga agatatccag gcgcggcgtc gcaccgccga
      901 tgccatcgag acggcctgcc gcgagcgcgg cctcaggatg accggacagc gccgcgtcat
      961 cgcccgcgtc ctcggcgagg ccgaggacca tcccgacgtc gtcgagttgc atcgccgcgc
     1021 cgccaccgtc gatgaccgga tttcgctgtc caccgtctat cgcacgctca agctcttcga
     1081 ggcggaaggc atcatcgaga agctcgagtt cctcggcggg cgctcgcgtt acgaacgcgc
     1141 gccgaaggag catcacgacc acctcatcaa cctggcgacc ggggaggtgc tggaattccg
     1201 gtccgaggag atcgaagccc tgcaaacgga gatcgccaag cgcctgggat ttcgtctcgt
     1261 ctcgcaccgg ctcgaactct acgccgtccc tcttcaacgc aagggcgtca agaccagatg
     1321 atcgtgacga gatgatcgct gcgggggtgg ggcttcgatt ggctgttcag gcctgcgcat
     1381 tcatggtcat ggcgcctttg caggtcctgg ccgcgcgcca cggctggcgg ctggccggct
     1441 ggctgccggt ctggtttcac cgcctgttcc tggggttgtt cggaacgcgc gtgatcgtgc
     1501 gcggccgccc accccaacac ggcgcgacgc tggtcctgtc caaccacgtt tcgtggctcg
     1561 atatccccgt cctcggcagc ttgcggcctc tgtccttcgt ggccaaatct gaaattgccg
     1621 gctggcccgt ggtcggcctg ttcgccaggc tgcagcgctc cgtgttcatc gatcgcgccc
     1681 gcaaaagcca cacggcctcc gtcaacacgg aagtcggaca ccgcctggca cggggcgacg
     1741 tgatcgtcct gttcccggaa ggaacaacgg gcgacggcaa ccgggttctg ccgttccgct
     1801 cggccctggt cggcgcggcg cgggccgcgc tcgccgagcc gtcgctgacc cgcatcaacc
     1861 tgcaccctct cgccatcacc tatgtgcgcc gcaacggcct gccggtgacg cgacgtgagc
     1921 ggcctgcgat cgcctggtat ggcgacatgg acctcgctcc tcatctcgcc gcattcctgc
     1981 gcgacggtcc cctcgatgcc gtcgtgcatt ggggcgagcc gattccgttc gattctgcgg
     2041 gcgatcgcaa gcgggccacc gccgaagcgg aggcggcggt gcgggaggcg gtgtacgcgg
     2101 ccctgagagc cgacgccggg ttgacgccgg cgggggcagc ttccctattc tctccgcggg
     2161 cgagagcgct taaagagagc cgcggctcga ccgtcccagc gccgccgctt cgccggcgaa
     2221 atggccgaga aggagcgtgt ctacggcgac cgctac
//
LOCUS       DATAIQ010000765         4872 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_202625, whole genome shotgun sequence.
ACCESSION   DATAIQ010000765 DATAIQ010000000
VERSION     DATAIQ010000765.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4872)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4872)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4872
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_202625"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..418)
                     /locus_tag="VHN20_12665"
     CDS             complement(<1..418)
                     /locus_tag="VHN20_12665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012331907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HEX2726664.1"
                     /translation="MADAEPAPMFFFAPFVSSTMAIEPDWIDYNGHMNMAFFHVLFDR
                     AVDEAFGLVGLGRDYIEQRNASFFTAEIHTLYKRELSLSDRVRITLQLIDFDEKRLHF
                     YQEMRHAEEGWVAATSENLCLHVDIASRKVTPFPGDI"
     gene            605..781
                     /locus_tag="VHN20_12670"
     CDS             605..781
                     /locus_tag="VHN20_12670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726665.1"
                     /translation="MTGSAYRHLDLAHKAELAGQAFGCQDADDAPLRGAHLRLLSTFF
                     SATGLFAVALYLVM"
     gene            complement(766..1272)
                     /locus_tag="VHN20_12675"
     CDS             complement(766..1272)
                     /locus_tag="VHN20_12675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MgtC/SapB family protein"
                     /protein_id="HEX2726666.1"
                     /translation="MLEDDVIEAVLRLSAATAAGMAIGLNRDLADKPMGMRTLGLVSL
                     GSALATLATTNFGVLDFPADAISRTIQGILTGVGFIGGGVILRDIGHRTVYGLTTAAT
                     VWIAAALGVTCGLGAWRIALAASAITLVLLVLGGPVERLVHLLRTGEALEAEDGDKAP
                     PKRDHMTR"
     gene            complement(1350..4079)
                     /gene="topA"
                     /locus_tag="VHN20_12680"
     CDS             complement(1350..4079)
                     /gene="topA"
                     /locus_tag="VHN20_12680"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018259862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003917 - DNA topoisomerase type I (single
                     strand cut, ATP-independent) activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HEX2726667.1"
                     /translation="MKVVVVESPAKAKTINKYLGKGYEVLASFGHVRDLPPKDGSVDP
                     EADFKMVWELEARGAKRVSEIAKAVKGADKLILATDPDREGEAISWHVVEALNAKKVL
                     KDIAIERVTFNAITRDAVQTAMQQPREIDRALVDAYLARRALDYLVGFTLSPVLWRKL
                     PGARSAGRVQSVALRLVCDRELEIEKFVPQEYWSLIATLATKDGGVFDARLVGADGNK
                     IQRLDIGKGDEAEAFKRDLELATFTVANVESKPAKRHPAPPFMTSTLQQEASRKLGLA
                     PAQTMRIAQRLYEGVDIGGETVGLITYMRTDGVDMAPEAISAIRSAIASDYGDRYLPD
                     APRRYTTKAKTAQEAHEAIRPTDVTRVPSSVARYLEPEQAKLYELIWIRTVASQMESA
                     VLERTTADISAKVGPRQLDLRATGQVVKFDGFLTLYQEGRDDEEDEDDKRLPPMSTGD
                     GLERRRITATQHFTEPPPRYSEASLVKRLEELGIGRPSTYAAILAVLREREYVRIEKK
                     RLVPEDKGLLVTAFLESFFKHLVEYDFTAELEEKLDNIANHEIDWKQVLRDFWQDFSF
                     AVAGTKDLRTSEVLDSLNELLGPHIFPPKTDGTSPRDCPGCGIGLLSLKLGKFGAFVG
                     CSNYPECRYTRQLMASGDGEGGNGIQGPRVLGDDPETGLQVTVRDGRFGPFVQLGEGS
                     DGEKPKRASIPRGTSPADVDLARALKLLSLPREVARHPQTGEPILANIGRYGPYVQHG
                     RTYANLGKDDDVLEIGGNRAIDLIVAKESGAGGGPRRNDPGRPLGEDPESGTTVVVKS
                     GRFGPYVTDGSVNATLPRDVSPDTVTLDAALALLSARRAAGGGGKRRARGGSKKAAAK
                     KSSAKAPAEEASSDTATKKGTAKKAASKKASAKKAASKKSASTKAKTATAPWE"
     gene            4260..>4872
                     /locus_tag="VHN20_12685"
     CDS             4260..>4872
                     /locus_tag="VHN20_12685"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003599343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004070 - aspartate carbamoyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0016597 - amino acid binding [Evidence
                     IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase catalytic
                     subunit"
                     /protein_id="HEX2726668.1"
                     /translation="MAPFVFPHRHLLGIEGLSPLELQALLDLADEQVDVSRQIEKKKT
                     TLRGRTQINLFFEPSTRTQASFEIAGKRLGADVMNMAVASSSVKKGETLIDTAMTLNA
                     MRPDIIIVRHHAAGAVHLLAQKVDCSVVNAGDGAHEHPTQALLDALTIRRNKGRIEGL
                     IVAICGDILHSRVARSNIIMLQALGARVRAIAPSTLLPAGIERL"
BASE COUNT          743 a         1622 c         1646 g          861 t
ORIGIN      
        1 ggatgtcacc ggggaaaggt gtcaccttgc gtgaggcgat gtcgacgtgc aggcacaggt
       61 tctcggaggt ggccgccacc cagccttcct cggcgtggcg catctcctga tagaagtgca
      121 gccgcttctc gtcgaaatcg atcagctgca gggtgatccg gacgcggtcg ctcagcgaca
      181 gctcgcgctt gtagagggtg tggatctcgg ccgtgaagaa cgaggcgttg cgctgctcga
      241 tatagtcgcg gccgaggccg accagcccga aagcctcgtc gacggcccga tcgaacagca
      301 catggaaaaa ggccatgttc atatggccgt tatagtcgat ccagtccggc tcgatcgcca
      361 tcgtggacga cacgaacgga gcaaagaaga acatcggagc tggctcggcg tcagccatga
      421 acggtctccc gttgcacaag aactgcaaag gtttctgccc cgtcagtcac acctagcatg
      481 cgccgcccgg ctgtccagcc ttttccgggc ccggccggat taactactgc cggcaactgt
      541 tcatgcattc ttcaaggtgc gcggctattc ttggctcgag gggaagaacg ccaaggatcg
      601 taccatgacg ggttccgctt accgacacct cgatctcgcc cataaggcgg agctggcggg
      661 ccaggcattc ggttgtcagg acgcggacga cgccccgctg cgcggcgcgc atctccggct
      721 tctatcgacg tttttctcgg caaccggcct gttcgccgtc gcgctctatc tcgtcatgtg
      781 atcacgcttg ggcggcgcct tgtcgccgtc ctccgcctcg agcgcctcac cggtcctgag
      841 caggtggacc agccgctcga ccggcccgcc caggaccagg agcacgaggg tgatggcgct
      901 cgccgccaag gcgatccgcc aggcgccgag gccgcaggtg acgcccaggg cagccgcgat
      961 ccacaccgtt gcggcggtcg tgaggccgta gaccgtgcgg tgcccgatat cgcgcaggat
     1021 gacgccgccg ccgataaagc cgacgccggt caggatgccc tggatggtgc ggctgatggc
     1081 gtcggcagga aagtcgagca cgccgaaatt cgtcgtcgcc agggtggcaa gcgccgagcc
     1141 gagggacacc agcccgagcg tgcgcatgcc catgggcttg tcggccaggt cacggttcag
     1201 gccgatcgcc atgcccgccg ccgttgcggc gctcaggcgc aaaaccgcct cgatgacatc
     1261 gtcctcaagc atgcccgctc cctgccaatt gctgtcggga agaacctatc ccgcgcagga
     1321 agcgcccgcc atccggcccg aagacgcggc tactcccagg gcgccgtggc ggtctttgct
     1381 ttcgtggacg ccgatttctt ggaggctgcc ttcttcgcgg acgctttctt tgaggccgcc
     1441 ttcttggccg tccccttctt ggtggccgtg tcggaggatg cctcctcggc cggcgccttc
     1501 gcggaggact tcttggccgc ggccttcttg ctgcctcccc gcgcccgccg cttgccgccg
     1561 ccgccagccg cgcgcctcgc gctgagcagg gcgagcgccg cgtcgagcgt gacggtgtcg
     1621 ggagagacgt cccgcggcaa ggtggcgttc acgctgccgt cggtaacgta agggccgaag
     1681 cggccggact tgaccaccac cgtcgtgccg ctctcgggat cctcgccgag ggggcggccg
     1741 ggatcgttgc ggcgcgggcc accgccggcg ccgctttcct tcgccacgat caggtcgatg
     1801 gcccggttgc cgccgatctc gagcacgtca tcgtccttgc cgagattggc gtaggtgcgg
     1861 ccgtgctgca cgtaggggcc gtagcggccg atattggcga ggatcggctc gccggtctgc
     1921 ggatgccggg cgacttcgcg cggcaacgac agcagcttga gggcgcgtgc gagatcgacg
     1981 tcggccgggg acgtgccccg cgggatcgag gcccgtttcg gcttctcgcc gtcgctgccc
     2041 tcgccgagct gcacgaacgg gccgaaccgc ccgtcgcgaa ccgtgacctg caggccggtc
     2101 tccggatcgt cgccgagcac gcgcggcccc tggatgccgt tgcctccctc gccgtcgccc
     2161 gaggccatca gctggcgcgt gtagcggcat tccggataat tggagcagcc gacgaaggcg
     2221 ccgaacttgc cgagcttgag cgacaacagg ccgatgccgc agcccgggca gtcgcgcggg
     2281 ctcgtgccgt ccgtcttggg cggaaagata tgcggcccga ggagctcgtt cagggagtcg
     2341 aggacctcgc tcgtgcgcag gtccttggtc cctgcgaccg cgaacgagaa atcctgccag
     2401 aagtcgcgca ggacctgctt ccagtcgatc tcgtggttgg cgatgttatc gagcttctcc
     2461 tcgagctcgg cggtgaaatc gtattcgacg aggtgcttga agaagctctc gaggaaggcc
     2521 gtcaccagga ggcccttgtc ctccggtacg agacgcttct tctcgatgcg cacgtattcg
     2581 cgctcgcgca gcacggccag gatggccgcg taggtcgagg gccggccgat gccgagctcc
     2641 tccaggcgct tgacgaggct cgcctcgctg tagcgcggcg gcggctcggt gaagtgctgg
     2701 gtagcggtga tgcgccggcg ttcgagccca tcgccggtgc tcatcggcgg caggcgcttg
     2761 tcgtcctcgt cctcctcgtc gtcgcggccc tcctggtaga gggtgaggaa gccatcgaac
     2821 ttgaccacct ggccggtggc gcgcaggtcg agctggcgcg ggccgacctt ggcgctgatg
     2881 tcggccgtcg tgcgttcgag cacggccgat tccatctggc tcgcgacggt gcggatccag
     2941 atcagctcgt agagcttcgc ctgctccggc tcgagatagc gcgcgaccga ggacggcacg
     3001 cgggtcacat cggtcgggcg gatcgcctcg tgcgcttcct gcgcggtctt ggccttggtc
     3061 gtgtaacggc gcggcgcgtc cggcagatac cggtcgccgt aatcgctggc gatggcggag
     3121 cggatggccg agatcgcctc cggcgccatg tcgacgccgt cggtgcgcat ataagtaatg
     3181 aggccgacgg tctcgccgcc gatgtcgacg ccctcgtaga gacgctgcgc gatgcgcatg
     3241 gtctgggccg gcgcgagccc gagcttgcgc gaggcctcct gctgcaaggt cgaggtcatg
     3301 aagggcggcg caggatggcg cttggcgggt ttcgattcga cgttggcaac cgtgaaggtg
     3361 gccagctcga gatcgcgctt gaaggcctcg gcttcgtcgc ccttgccgat atcgaggcgt
     3421 tggatcttgt tgccgtcggc gccgacgagc cgcgcgtcga agactccgcc gtccttggtc
     3481 gcgagcgtgg cgatgagcga ccagtattcc tgcggaacga atttctcgat ctcgagctcg
     3541 cggtcgcaga cgaggcgcaa cgccaccgac tgcacgcgcc cggccgagcg cgcgcccggg
     3601 agcttgcgcc acaagaccgg ggacagggtg aagccgacga gataatcgag cgcgcggcgg
     3661 gcgagatacg cgtcgaccag cgcgcggtcg atctcgcgcg gctgctgcat ggccgtctgc
     3721 accgcgtcgc gcgtgatggc gttgaaggtc acgcgctcga tggcgatgtc cttgagcacc
     3781 ttcttggcgt tgagcgcctc aaccacgtgc caggagatgg cctcgccttc gcggtccggg
     3841 tcggtggcga ggatcagctt gtcggcgccc ttgaccgcct tggcgatctc ggagacgcgc
     3901 ttggcgccgc gggcttccag ctcccagacc atcttgaaat cggcctcggg atcgaccgag
     3961 ccgtccttgg gcggcaggtc gcggacatgg ccgaacgagg ccaggacctc atagcccttg
     4021 cccagatatt tgttgatcgt cttggccttt gccggcgact cgacgacgac gaccttcatg
     4081 ttcccaaagc cttgattgtc ttgagaaagg cgggtttgcg cgggcgcttg gccgcgattc
     4141 gccgagcctt aagtggtgca ccgagggggc ggagtcaaat gggccggcct taactctacg
     4201 ttaacgccgc acgccccctc ccttgatttt tcggcccaaa cccgtagggc aggggaccta
     4261 tggccccgtt cgtttttccg caccggcatc tgctcggaat cgaggggctg tcgccattgg
     4321 agctgcaggc cctgctcgat ctcgccgacg agcaggtcga cgtgagccgg cagatcgaga
     4381 agaagaagac gacccttcgc ggccgtaccc agatcaacct gttcttcgag ccttcgacgc
     4441 gcacgcaggc ctcgttcgag atcgccggca agcgcctcgg cgccgacgtc atgaacatgg
     4501 ccgtcgcctc ctcgtcggtg aagaagggcg agacgctgat cgacaccgcc atgacgctca
     4561 acgccatgcg gcccgacatc atcatcgtgc gccaccacgc cgccggcgcc gtgcatcttc
     4621 tcgcccagaa ggtcgactgc tcggtggtca atgccggcga cggcgcgcac gagcatccga
     4681 cgcaggcgct tctcgacgcg ctcaccatcc ggcgcaacaa gggccgcatc gagggcctga
     4741 tcgtcgccat ctgcggcgac atcctgcact cgcgcgtcgc gcgttccaac atcatcatgc
     4801 tgcaggcgct cggcgcgcgc gtgcgcgcca tcgctccgtc gacgctgctg ccggccggca
     4861 tcgagcgtct cg
//
LOCUS       DATAIQ010000766         1842 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_409262, whole genome shotgun sequence.
ACCESSION   DATAIQ010000766 DATAIQ010000000
VERSION     DATAIQ010000766.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1842)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1842)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1842
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_409262"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..764
                     /locus_tag="VHN20_12690"
     CDS             <1..764
                     /locus_tag="VHN20_12690"
                     /inference="COORDINATES: protein motif:HMM:NF014796.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004784 - superoxide dismutase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006801 - superoxide metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="Fe-Mn family superoxide dismutase"
                     /protein_id="HEX2726669.1"
                     /translation="AELLNSTLLHELYFASLGGDGRTPTDAMRRALTDDFGSVDRWRD
                     EFILLAEALGGDAGWVLLSYVPRDRRLINHSATDHRQSLAGGIPILALDMYAHAYHIE
                     FGANPTAYVASFMRNIHWDAVEARYHDAVAVAPPRPLEQPEFADVPSISPEEVQAMLA
                     SGEKVQIIDTRPRHYSTRSDEIVEGAEWRDPERIDEWMGTLSKETPVVTFCVYGFHIG
                     CQSAVALRKAGFDARYMAGGHYAWKAIKAPVARFA"
     gene            892..1632
                     /locus_tag="VHN20_12695"
     CDS             892..1632
                     /locus_tag="VHN20_12695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018272332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEX2726670.1"
                     /translation="MDGLALGLYIAATFAGGFTSGLTGFAAGLVVSGVWLHVITPLQT
                     AVLIAAYGVVNQAYGILKVRHAVRWRRVLPFVVGGAIGVPLGAYLLTYVDPAHLRVGV
                     GVLLILYSAYNLARPPLKPVTSNPPTDVAVGVLNGLLGGLTGLGGVISTIWVQLGGGP
                     KDAQRAVFQPVLFLTMAMTTLTFAASGYLFDRHILWLFLLGLPALLIGLWIGVLAYGK
                     LDDAAFRKAILVLLLVSGVSLVAPAMFR"
     gene            complement(1655..>1842)
                     /locus_tag="VHN20_12700"
     CDS             complement(1655..>1842)
                     /locus_tag="VHN20_12700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014492556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HEX2726671.1"
                     /translation="AGRGPVSNRLAKELVDAAQDLALDAALSRSTVAQQAIFDSRDLQ
                     QGAAAFLAKKDPVFQGR"
BASE COUNT          263 a          615 c          620 g          344 t
ORIGIN      
        1 aggcggagct gctcaactcg acgctcctgc acgagcttta tttcgccagc ctcggcggcg
       61 acggccggac gccgaccgac gccatgcgcc gcgcgctcac ggacgacttc ggatcggtcg
      121 accgctggcg cgacgaattc atcctgctgg cggaagcgct cggcggcgac gcgggatggg
      181 ttttgctgtc gtatgtgccg cgcgaccggc ggctgatcaa tcacagcgcc accgaccacc
      241 gtcagagcct cgcgggcggc attccgatcc tggcgctcga catgtacgcg catgcctatc
      301 atatcgagtt cggcgccaat ccgaccgcct acgtggcgtc cttcatgcgc aacatccatt
      361 gggatgccgt agaggcgcgc taccacgacg cggtcgcggt ggcgccgcca cgtccactcg
      421 aacagccgga attcgccgac gtgccgtcga tcagcccgga ggaggtgcag gccatgctgg
      481 cgtccggcga gaaggtgcag atcatcgaca cgcgtccgcg ccactacagc acgcgttccg
      541 acgagatcgt cgaaggcgcc gagtggcggg atccggagcg catcgacgag tggatgggca
      601 cgctttcgaa ggagacgccc gtcgtcacct tctgcgtcta cgggttccac atcggctgcc
      661 agagcgcggt agcgttgcgc aaggcagggt tcgatgcgcg ctacatggcg gggggccatt
      721 acgcgtggaa ggccatcaag gctcccgtcg cgcggttcgc gtgacggcgc acgccatgag
      781 ccggcgaagc ctcgtctctt atcggcggcc gggcccgatg tcgtatcctg accttgaacg
      841 gcgccgggct ggcccctggc ccgtccccgc catttccttg cggtgccacc tatggatgga
      901 cttgcgctcg gcctctacat cgcggcgact tttgccggcg gcttcacgag cgggctgacg
      961 ggcttcgccg cggggctcgt cgtctcaggc gtatggctgc acgtcatcac gcctttgcag
     1021 acggccgtgc tgatcgctgc ctacggcgtc gtcaaccagg cctacggcat cttgaaagtg
     1081 cgccacgcgg tgcggtggcg ccgggtcttg cctttcgtcg tcggcggtgc catcggcgtt
     1141 ccgctcggcg cctatttgct gacgtatgtc gatccggcgc atctgcgcgt cggcgtcggc
     1201 gtcttgttga tcctttacag cgcctacaac cttgcgcgtc ccccgcttaa gccggtcacc
     1261 tcgaacccgc cgacggatgt tgcggtgggc gtcttgaacg gactgctcgg cgggctcacc
     1321 ggcctcggcg gcgtcatcag cacgatctgg gtgcagctcg gcggcggacc caaggatgcg
     1381 cagcgtgcgg tgttccagcc ggtgctgttc ctgacgatgg cgatgacgac gctgacattc
     1441 gccgcgtccg ggtacctgtt cgaccgccat atcctctggc tgtttctgct cgggctgccg
     1501 gcattgctca tcggtttgtg gatcggggtc ctggcctacg gcaagctcga cgacgcggcc
     1561 ttccgcaagg ccatcctggt cctgctgctg gtttcgggag tgtcgctggt ggcgccggcg
     1621 atgttcaggt gagcgcgtcg ccgccagcac gggctcatcg cccctgaaaa accggatcct
     1681 tcttggcgag aaatgccgcg gccccttgct gcaggtcgcg cgaatcgaag atcgcctgct
     1741 gggccaccgt cgaccgggag agcgcggcgt cgagcgccag gtcctgtgcc gcgtcgacca
     1801 gctccttggc gaggcgattg gaaacagggc cgcgaccggc ga
//
LOCUS       DATAIQ010000767         1820 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_156975, whole genome shotgun sequence.
ACCESSION   DATAIQ010000767 DATAIQ010000000
VERSION     DATAIQ010000767.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1820)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1820)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1820
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_156975"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..207
                     /locus_tag="VHN20_12705"
     CDS             <1..207
                     /locus_tag="VHN20_12705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726672.1"
                     /translation="LIINEGSLHPEINAVAVPVVAEDGSVALTLSSGGIGAIFHRAKL
                     DVIGQELKGLAAQLVPVLSRTAVN"
     gene            338..1210
                     /locus_tag="VHN20_12710"
     CDS             338..1210
                     /locus_tag="VHN20_12710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018700855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEX2726673.1"
                     /translation="MKLCRYDDNRIGVVRNDRVHDVSSIVQSLPSVGYPFPLGDQLVA
                     HLDTLRPDIERLADKAKPLPVEDVRFLSPVANPTKIIGTPVNYEDHAAEARADAVISL
                     AHAEHGGKQRKIEEAGLFLKASSSLVGPSEGVVIRFPERRTDHEAELGLVIGRRVSNI
                     SEQEALSAVAGYAIALDMVVRGTEDRSFRKSCDTFSVLGPWLVTADELGDPGSLSFSL
                     SVNGEPRQNANTRNMIVGVARQIAWASSMYTLYPGDIIMTGTPAGVGPVRAGDTMTVT
                     FDRIGSMQVPVRAA"
     gene            1266..>1820
                     /locus_tag="VHN20_12715"
     CDS             1266..>1820
                     /locus_tag="VHN20_12715"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEX2726674.1"
                     /translation="MPDDHARVATETFDYGPADGPLEAFVAYDRRQTGRLPGVLVLHT
                     WRGLDDYIRRRTQMVAELGYVAFAGDIFGKGVVPNDIAERRALLDRYLGDRALLRERC
                     RTALDVLRAHPMVDPGRLAAIGYCFGGCAALELARSGADVRGVVSFHGLLGSPTPQDA
                     RNIRGSVLVLNGAEDPRVPRSDVDA"
BASE COUNT          304 a          614 c          598 g          304 t
ORIGIN      
        1 ttgatcatca acgaaggctc gctgcatccc gagatcaacg ccgtggccgt gcctgtcgtg
       61 gcggaggacg gctccgtcgc gctcaccctc agctcgggcg gcatcggcgc catctttcat
      121 cgcgccaagc tcgacgtcat aggacaggaa ctcaagggac tggcagcaca gctggtgccc
      181 gtgctctcgc gtactgcggt gaactgaggc acaattcgca taacgaattg acaattcgga
      241 agcggcaacc tatcgctctc gcccagccgc aatggcgctt gtggcgcgcc cgccggcccg
      301 acgcgatcag aagaccgaca tctgaaaagg cgcagtcatg aagctctgca gatacgatga
      361 caacaggatc ggcgtcgtgc gcaatgaccg cgtgcacgat gtctcgtcca tcgtgcagtc
      421 gctgccgagc gtcggctatc cattcccgct cggcgatcaa ctggtcgccc atctcgacac
      481 gttgcgtccc gacatcgagc gcctcgccga caaggcgaag ccgctgccgg tggaagacgt
      541 gcggttcctg agccccgtcg ccaatcccac gaagatcatc ggcacgcccg tcaactacga
      601 ggaccacgcc gcggaggcgc gcgccgacgc cgtgatttcg ctggcccatg cagaacatgg
      661 cggcaagcag cgcaagatcg aggaggccgg acttttcttg aaagcgtcga gctccctggt
      721 cggtccgtcg gagggcgtcg tgatccgctt cccggagcgg cgcacggatc atgaagcgga
      781 gctcgggctc gtcatcggcc gccgcgtctc caacatcagc gagcaggagg cgttgagcgc
      841 cgttgccggc tacgccatcg ccctcgacat ggtcgtgcgc ggcacggaag accgcagctt
      901 ccgcaagtcg tgcgacacct tctcggtgct cggcccgtgg ctggtgacgg cggacgagct
      961 cggcgaccct ggatcgttga gtttttcgct gtccgtgaac ggagagccgc gccagaacgc
     1021 gaatacgcgc aacatgatcg tcggcgtggc gcggcagatc gcctgggcgt cgtcgatgta
     1081 cacgctctac cccggggata tcatcatgac cggcacgcct gccggcgtcg ggccggtgcg
     1141 cgccggcgac accatgaccg tcacgttcga tcgtatcggc tcgatgcagg tgccggtgcg
     1201 cgccgcctga gccgctctcg ccgcgccggg ccgaagcgtt cgccagtcga cagaaaggac
     1261 gggaattgcc ggacgatcac gccagggtcg ccaccgagac cttcgattac ggtccggccg
     1321 atggcccact tgaagccttc gtggcctacg accggcggca aacggggagg ctgcccggag
     1381 ttctcgtgct gcacacctgg cgtgggctcg acgattacat tcggcgccga acgcagatgg
     1441 tcgccgagct cggctacgtc gcgtttgcgg gcgacatctt cggcaagggc gtcgtcccga
     1501 atgacattgc tgaacggcgc gcgttgctcg acaggtacct cggcgaccgc gcgctgctgc
     1561 gcgagcgctg ccgcaccgcg cttgacgtct tgcgggccca tcccatggtc gatccaggaa
     1621 ggctcgccgc gatcggttac tgcttcggcg gatgcgccgc tctcgagctg gcgcgcagcg
     1681 gcgccgacgt gcgtggcgtg gtcagcttcc atggccttct cggcagcccg acgccgcagg
     1741 acgcgcgcaa catccgcggc tcggtcctgg ttctgaacgg cgccgaggat ccgcgcgtgc
     1801 cgcgctccga cgtcgacgcg
//
LOCUS       DATAIQ010000768         1826 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_132656, whole genome shotgun sequence.
ACCESSION   DATAIQ010000768 DATAIQ010000000
VERSION     DATAIQ010000768.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1826)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1826)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1826
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_132656"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(189..449)
                     /locus_tag="VHN20_12720"
     CDS             complement(189..449)
                     /locus_tag="VHN20_12720"
                     /inference="COORDINATES: protein motif:HMM:NF018294.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1127 domain-containing protein"
                     /protein_id="HEX2726675.1"
                     /translation="MLTLPTSPPVVLLAPSPGSGFIPQLAARALRSVAGWAERRRQLR
                     ALSDLDDHLLGDIGLSHADVEHACSRPFWALKSLEAQRPNAR"
     gene            complement(586..>1826)
                     /locus_tag="VHN20_12725"
     CDS             complement(586..>1826)
                     /locus_tag="VHN20_12725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726676.1"
                     /translation="SRYVDMDRLAVSPQCGFASVETGNPITREAQEQKLRLVVEVAQD
                     LWGTAGSHSVQSAGNKTGETSMFRSFRLRLAAGSLATLAVTSAAFATEDAVAQFYRGK
                     QITMLIGSSPGGGYDLYARLIARHLGRYIPGNPSIVPTNMPGAGSHTAAAHIYAVAPK
                     DGTVIGALQSGVVFEPLLAARTFNHDPTKFNYLGSANDDVYVCIARTDAPVSTFKEVF
                     TRELILGGSPSSSPTDNPTFLNNVIGTRFKVITGYPGTREIGIAIDRNEVQGACGVAW
                     PSISVTNPGWFKDGKMRVLVQTHQTGHPDLNKGGVPRANEFARNPEERTMIDLYFSQT
                     AFGRPYLVAPDVPKERVEALRKAFQEAVRDPQLIAEATKIGIEMNQVTGERLQELVTR
                     IFSSPPDLIAKMRQAIIPKT"
BASE COUNT          295 a          564 c          616 g          351 t
ORIGIN      
        1 ggcgttgagc cggtggaggg cgccgccgta attgtgctcg taatggcttt cgatgagccg
       61 cggcgagatg ccgttcaggg tccaggggcg gcagaaaagc ggggcgacgc ggtatctcat
      121 gtcgatctcc cacgggcggg cggagtttcg tcagcggtgt cctcccgcga tgacaaaggg
      181 ctctcgtttc agcgcgcgtt cggtcgttgt gcttccaggc tcttcagcgc ccagaacggc
      241 ctcgagcaag cgtgctcgac gtcggcatgg gacaagccga tgtcgcccag gaggtgatcg
      301 tcgagatcgg acagggcgcg cagctggcgg cgccgctcgg cccatccggc aacggatcgc
      361 agcgcgcggg cggcgagctg cggaatgaaa ccggaaccag gggaaggcgc cagcaagacg
      421 actggcgggc tcgtcggaag ggtcaacatt tctcaggctc cttttctcgg gagccttcct
      481 ataagagcct cctgctcttg cgcgcaaagc atcgtttctc gagcatgcct tagtttttct
      541 catgaaggcg cccggcaacg tgcgcgtgcg ggcaggctca tgcccctagg tcttgggtat
      601 gatggcctgc cgcatcttgg cgatgagatc gggcggagac gagaagatcc tggtcacaag
      661 ctcctgcagc cgctcgccgg tcacctggtt catctcgatg ccgatcttgg tcgcctcggc
      721 gatcagctga ggatcgcgca cggcttcctg aaaggctttc cgcaacgcct cgacgcgttc
      781 cttcggcacg tcgggtgcga cgagataagg acggccgaac gccgtctggc tgaagtagag
      841 gtcgatcatc gtccgctctt cgggattgcg ggcgaactcg ttggcgcgcg gcacgcctcc
      901 cttgttgagg tcgggatggc ccgtttgatg cgtctggacc aggacgcgca tcttgccgtc
      961 cttgaaccag ccgggattcg tcaccgagat cgacggccag gccacgccgc aggcgccctg
     1021 cacctcgttc ctgtcgatgg cgatcccgat ttcccgggtt ccgggatagc cggtgatcac
     1081 cttgaacctg gtgccgatca cgttgttgag gaaggtcgga ttgtcggtcg gcgagctcga
     1141 cgggctgccg ccgagaatga gctcgcgcgt gaacacctcc ttgaaggtgc tgacgggagc
     1201 gtcggtgcgg gcgatgcaca cgtagacgtc gtcgttggcg ctgcccagat agttgaactt
     1261 ggttggatcg tggttgaatg tccgcgccgc gagcaagggc tcgaagacga cgccggactg
     1321 caaggccccg atcaccgtcc cgtccttcgg cgcaacggca tagatgtgag ccgccgccgt
     1381 gtggctcccc gcgccgggca tgttcgttgg cacgatgctc ggattgccgg ggatgtacct
     1441 gccgagatgg cgcgcgatca gacgcgcata cagatcgtag ccgccgcccg gggacgagcc
     1501 gatcagcatg gtgatctgct tgcctcgata gaactgcgcg acggcgtcct cggtcgcaaa
     1561 tgcggcgctg gtcacggcca gcgtcgccag gctgccggca gcgagccgta atcgaaagct
     1621 cctgaacatg gacgtctccc cggttttatt ccccgcgctt tgcaccgaat ggcttcccgc
     1681 ggtgccccac aaatcctgcg ccacttcgac cacgagccgg agcttttgct cctgggcctc
     1741 gcgcgtgatc ggattgcccg tctcgacgct ggcgaagccg cattgcgggc tgacggcgag
     1801 ccggtccatg tcgacgtagc ggctcg
//
LOCUS       DATAIQ010000769         3383 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_455090, whole genome shotgun sequence.
ACCESSION   DATAIQ010000769 DATAIQ010000000
VERSION     DATAIQ010000769.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3383)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3383)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3383
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_455090"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..659)
                     /locus_tag="VHN20_12730"
     CDS             complement(<1..659)
                     /locus_tag="VHN20_12730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019195887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX2726677.1"
                     /translation="MIPNAAREFNFDLGETADAIRATVREFAQERIAPRAEEIDRSNT
                     FPRDLWPQMGALGLHGITVEEEHGGAGLGYLEHCVAMEEVSRASASVGLSYGAHSNLC
                     VNQIRRNGSDAQKRKFLPKLISGEHVGALAMSEPGAGSDVVSMATRADKRGDRYVLNG
                     SKMWITNGPLAETLVVYAKTDPAAGARAITAFIIEKGFAGFSTHQKLDKRGMRGSDTC
                     EL"
     gene            complement(880..1713)
                     /locus_tag="VHN20_12735"
     CDS             complement(880..1713)
                     /locus_tag="VHN20_12735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018043567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003796 - lysozyme activity [Evidence
                     IEA];
                     GO_process: GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA];
                     GO_process: GO:0016998 - cell wall macromolecule catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GH25 family lysozyme"
                     /protein_id="HEX2726678.1"
                     /translation="MAGPNRRVAFVARPLLTMMTLALLVACTGGGPNYYPTKGDARPH
                     PAVARAHKLPIHGVDVSRYQGRIDWASVRDAGTQFAFIKATEGGDYVDPMFAENWRGA
                     RRAGVPRGAYHFMYWCRPAREQAAWFKRNVPADPEALPPVLDLEWNGHSQTCPFKASR
                     EAALEAIKLMLDEMERHTGKRPMIYTDITFHRDILEGEFHDYPHWVRSTAAEPHERYN
                     RRRWTMWQYTTTGRVPGIQGDVDRNAFYGGEAEWATFLATDCDPRDHRRLAAHGICGG
                     K"
     gene            complement(1865..2020)
                     /locus_tag="VHN20_12740"
     CDS             complement(1865..2020)
                     /locus_tag="VHN20_12740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726679.1"
                     /translation="MSETEPKAVDLASLEKTLQASIKLMRKTRRSMERMRRKPDRPEH
                     AGEHEAA"
     gene            complement(2118..>3383)
                     /gene="mgtE"
                     /locus_tag="VHN20_12745"
     CDS             complement(2118..>3383)
                     /gene="mgtE"
                     /locus_tag="VHN20_12745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007603218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015095 - magnesium ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015693 - magnesium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter"
                     /protein_id="HEX2726680.1"
                     /translation="EDLHEADLGDLLEALDPERRPRLIELLGRDFDFAALTEVDDAVR
                     DDILEELEPQTVAEGVRELDSDDAVSILEDLDEADRAEILDQLPMPERIALQRSLDYP
                     EDSAGRRMQTEFIAVPPFWTVGQTIDFMRETADLPDTFYEIFVIDPAYHLCGTVPLDK
                     MLRSKRPIRIGDIMVSEPDVVRATDDQEDVARLFQHYNLVSAAVVDESNRLVGVIMVD
                     DIVDVIEEEADEDLKALGGVHAEEELSDDVLYTARSRFTWLFVNMLTALAAATVIRMF
                     EGTIQKMVALAVLMPVVASMGGNAGTQTMTIAVRALATRELGRANAWRIVRRELCVGL
                     LNGLAFALIVGVIAATWFEIADLGVVIGLALLTVLTSAALGGILIPLALDRMGVDPAV
                     SSGPFVTTITDIVGFFSFLGIATLWLGLR"
BASE COUNT          521 a         1110 c         1184 g          568 t
ORIGIN      
        1 agttcgcagg tgtcggagcc acgcatgccg cgcttgtcga gcttctggtg ggtggaaaag
       61 ccggcaaaac ctttctcgat gatgaaggcc gtgatggcgc gcgcgcccgc cgccgggtct
      121 gtcttggcgt agacgaccag cgtctcggcg agcgggccgt tggtgatcca catcttgctg
      181 ccgttgagga cgtagcgatc gccgcgcttg tcggcgcgcg tcgccatcga caccacgtcg
      241 gagcccgccc ccggctcgga catggcgagc gcaccgacat gctcgcccga aatcagcttc
      301 ggcaggaatt ttcgcttctg cgcgtcgctg ccgttgcggc ggatctggtt gacgcacagg
      361 ttcgaatggg cgccgtagga gaggccgacg gacgcggagg cgcgcgacac ctcctccatg
      421 gcgacgcaat gctccagata accgaggccg gcgccgccat gctcctcctc gaccgtgatg
      481 ccgtgcaggc cgagggcccc catctgcggc cacaggtcac gcggaaaggt gttgctgcgg
      541 tcgatctcct cggcgcgtgg ggcgatgcgc tcctgggcga actcgcggac cgtcgctcgg
      601 attgcgtcgg cagtctcgcc gaggtcgaag ttgaactcgc gggcggcgtt ggggatcatc
      661 ggcgcgtcct cggtgctccg gacgttatag caaggccgcg cgatatcgtt cacccctgcc
      721 gaaagagcga ccgacattcc tccccttggg gcggggcgga cttgacgcgg cagcgtccga
      781 gctggattgg ggtgatgcgc agcgtatgtc tcgagcggtt gccccacccc gtcgctccgc
      841 gactcggccc tcccctgaag ggtagggcta tcgcaagcgc tacttgcctc cgcagatgcc
      901 gtgcgcggcg aggcggcgat ggtcgcgcgg gtcgcagtcg gtcgccagga acgtcgccca
      961 ttcggcctcc ccgccataga aggcgttgcg gtcgacgtcg ccctggatgc cggggacccg
     1021 gcccgtcgtg gtgtattgcc acatcgtcca gcggcgcctg ttgtagcgct catgcggctc
     1081 ggcggccgtg ctgcgcaccc agtgcgggta gtcgtggaac tcgccctcga gaatgtcccg
     1141 atggaaagtg atgtccgtgt agatcatggg ccgcttgccg gtgtggcgct ccatctcgtc
     1201 cagcatcagc ttgatcgctt ccagcgccgc ctcgcgcgag gccttgaacg ggcaggtctg
     1261 cgaatggccg ttccactcca ggtcgagcac cggcggcagc gcctccgggt ccgccgggac
     1321 attgcgcttg aaccaggccg cctgctcgcg ggccggccgg caccaataca tgaaatggta
     1381 ggcgccgcgc ggcactccgg cccgccgcgc gccgcgccag ttctccgcga acatggggtc
     1441 gacgtagtcg ccgccctcgg tcgccttgat gaaggcgaac tgcgtgcccg catcgcgcac
     1501 cgacgcccag tcgatgcggc cctggtagcg cgacacgtcg acgccgtgga tcggcagctt
     1561 gtgcgcccgc gccacggccg gatgcggccg cgcatcgccc ttggtcggat aatagttcgg
     1621 cccaccgccg gtgcatgcca ccagcagtgc aagcgtcatc atcgtcagga gaggccgcgc
     1681 gacgaacgcc acgcggcggt ttggtcccgc catgtcgtcg aacccgtccc tttggacgga
     1741 aatctgcccc gtctgttcct tagaaaatct taacggggct tgcgggacgg cgccagagcg
     1801 gggcagcggg gcaggcgcga gtgattcgcg gagtgtggcc ccgccgcatc aaatcgacgg
     1861 ccggtcaggc ggcctcgtgc tcgccggcgt gctcggggcg gtccggcttg cggcgcatgc
     1921 gctccatcga gcgccgggtc ttgcgcatca gcttgatgga agcctggagg gtcttctcga
     1981 ggctggccag atccacggct ttgggctcgg tctcgctcat cgcgatgcac tcccttggca
     2041 gtttgcagaa gttaacgccg caagaaggca atggttcagc ttggccggcg tccgggctgg
     2101 ggtcagctgt ggacaactca gcgcaggccc agccacaggg tggcgatgcc caggaaggag
     2161 aagaagccga cgatgtcggt gatggtcgtg acgaacgggc cggacgagac ggccgggtcg
     2221 acgcccatgc ggtcgagggc gagcgggatc aggatgccgc cgagcgccgc cgacgtcagc
     2281 acggtcagga gggccagccc gatcaccacg ccgaggtcgg cgatctcgaa ccacgtggcg
     2341 gcgatcacgc ctacgatcag cgcgaaggcg aggccgttga gcaggccgac gcacagttcg
     2401 cgccgcacga tgcgccaggc attggcgcgg ccgagctcgc gcgtcgcgag cgcgcgcacc
     2461 gcgatcgtca tggtctgcgt tcccgcgttg ccgcccatgg aggccaccac cggcatcagg
     2521 acggcgagcg cgaccatctt ctggatcgtg ccttcgaaca tgcggatcac cgtggcggcg
     2581 gccagggccg tgagcatgtt gacgaacagc caggtgaagc ggctgcgcgc agtatagagc
     2641 acgtcgtcgg agagctcctc ctcggcgtgc acgccgccga gcgccttgag gtcctcgtcg
     2701 gcctcctcct cgatcacgtc gacgatgtcg tcgaccatga tcacgccaac cagacggttg
     2761 ctctcgtcga cgacggccgc cgagacgagg ttgtaatgct ggaacaggcg ggcgacatcc
     2821 tcctggtcgt cggtggcgcg cacgacgtct ggctcgctca ccatgatgtc gccgatgcgt
     2881 atcggacgtt tcgagcgcag catcttgtcg agcggcacgg tcccgcacag gtggtaggcc
     2941 gggtcgatga cgaagatctc gtagaacgta tccggcaggt ccgcggtctc gcgcatgaaa
     3001 tcgatcgtct gcccgaccgt ccagaacggc ggcacggcga tgaattccgt ctgcatgcgt
     3061 cgcccggcgg aatcttccgg gtagtcgagg gagcgctgca gggcgatgcg ctcaggcatc
     3121 ggcagctggt cgagaatctc ggcgcggtcg gcctcgtcga ggtcctccag gatcgagacc
     3181 gcgtcgtcgg agtcgagctc gcgcacgcct tcggccacgg tctgcggctc aagctcctcg
     3241 aggatgtcgt cgcggacggc gtcgtcgacc tcggtcaggg cggcgaagtc gaagtcgcgg
     3301 ccgaggagct cgatcaggcg cggccggcgt tcgggatcga gcgcttcgag aagatcgccg
     3361 agatcagcct cgtgcaggtc ctc
//
LOCUS       DATAIQ010000770         2348 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_64171, whole genome shotgun sequence.
ACCESSION   DATAIQ010000770 DATAIQ010000000
VERSION     DATAIQ010000770.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2348)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2348)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2348
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_64171"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1055
                     /locus_tag="VHN20_12750"
     CDS             <1..1055
                     /locus_tag="VHN20_12750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018260822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEX2726681.1"
                     /translation="LPDGRKVITARGACDDKGQVMTFIEACRAWKAMTGELPVGVTIL
                     IEGAEEDGSKFLPEFVEANRDELKADVVLVCDTGMWDRNTPAITTSLRGLVYEEVVVR
                     CADRDLHSGLFGGAARNPVHVLARIIADLHDESGRVTLPGFYDGVPETPREQLEQWKR
                     LNLTAEDFLGQVDLRIPAGEKDRMLIEQIQSRPTCDVNGIVGGYTGVGAKTVIAAEAS
                     AKISFRLVGDQDPQKVSDAFKNFVRARIPADCSVEFVKHKGSRALALPYDMAALGKAK
                     AALREEWGREPVTIGSGGSIPIVGDFKRTLGLDTLLVGFGLDDDRVHSPNEKYELQSF
                     HKGARSWARILAALAS"
     gene            1166..1636
                     /locus_tag="VHN20_12755"
     CDS             1166..1636
                     /locus_tag="VHN20_12755"
                     /inference="COORDINATES: protein motif:HMM:NF025887.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX2726682.1"
                     /translation="MKHIGWAVALLMIAVTSAASAQSARLPRNVESAATQDVLAVRDK
                     IRNAVAGKNRSALEALYSDDFVHLRDSGRVEIKGDRISLLLSGEPTIEVAPEESVDVR
                     LFGPTTAIATGVSLIRDPQVRKNVPFRWLTVYVKQGDAWQVAASQASRLVRGGR"
     gene            complement(1766..2023)
                     /locus_tag="VHN20_12760"
     CDS             complement(1766..2023)
                     /locus_tag="VHN20_12760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726683.1"
                     /translation="MTNGESLQWRPISTAPRDQSVLIYSLRWGAMIATFDTAREAWVP
                     RMRHPEQLNGNDTALLTHWMPMPGVPNALTGSRLIWRSLAA"
BASE COUNT          400 a          743 c          805 g          400 t
ORIGIN      
        1 cgctgccgga tgggcgcaag gtcatcaccg cacgcggagc ctgcgacgac aagggacagg
       61 tcatgacctt catcgaggcg tgccgcgcct ggaaggcgat gacgggggag cttccggtcg
      121 gcgtcaccat cctgatcgag ggcgccgaag aggatggttc gaagttcctg ccggaattcg
      181 tcgaggcgaa ccgtgacgaa ctcaaggccg acgtcgtgct cgtctgcgac acgggcatgt
      241 gggaccggaa cacgccggcc atcaccacct cgttgcgcgg cctcgtctat gaagaagtgg
      301 tcgtgcgctg cgccgaccgc gatctgcatt ccgggctgtt cggcggcgcc gccagaaatc
      361 cggtgcacgt cctcgccagg atcatcgccg acttgcacga cgagagcggc cgcgtgacgt
      421 tgcccggctt ctacgacggg gtgccggaga cgccgcgcga gcagctcgag caatggaagc
      481 ggctcaatct gacggccgag gattttcttg ggcaggtcga cctgaggatt cccgccggcg
      541 agaaggaccg catgctgatc gagcagatcc agtcgcgccc gacctgcgac gtcaacggca
      601 tcgtcggcgg ctacacgggc gtcggcgcca agacggtcat cgcggcggag gcgagcgcca
      661 agatctcgtt ccggcttgtg ggcgaccagg acccgcagaa ggtgagcgac gcgttcaaga
      721 atttcgtgcg cgcgcgcatc ccggccgact gctccgtcga attcgtcaag cacaagggct
      781 cgcgcgcgct cgccctgccg tacgacatgg ccgcccttgg caaggcgaag gctgcgctgc
      841 gggaggaatg gggacgcgag ccggtgacca tcggttccgg cggctccatc ccgatcgtcg
      901 gtgacttcaa gcgcacgctc ggcctcgaca cgctgctcgt cggcttcggc ctcgatgacg
      961 atcgcgtgca ttcgccgaat gaaaaatacg agctgcagag cttccacaag ggcgcgcgca
     1021 gctgggcgcg tatccttgcg gcgctggcgt catagatcgg gatcgcgtcc ggttgcgtcg
     1081 atccgggtgc aagaatcgag taccgcatga tccgcgtcgg cgaagtggtg cccgcttcgc
     1141 cggatcatgc tctgggggga gagcaatgaa gcatattggt tgggccgtcg cgctgcttat
     1201 gattgcggtg acgtcagccg cgagcgcgca gtcggcgcgc cttccgcgca atgtcgaatc
     1261 agcggcgacg caggacgttc tcgccgtgcg cgacaagatc cgcaacgccg tggcgggcaa
     1321 aaaccggtcg gccctggaag cgctgtattc cgacgatttc gtgcatcttc gcgattccgg
     1381 ccgcgtcgag atcaaaggcg accgcatcag tctcttgctg tccggcgagc cgaccatcga
     1441 ggtcgctccc gaagagagcg tcgacgtgcg cctgttcggg ccgaccacgg cgatcgcgac
     1501 cggcgtcagc ctgatccgcg acccgcaggt gcgcaagaac gtgccgtttc gctggctcac
     1561 cgtctacgtc aagcagggcg acgcatggca ggtcgccgca agccaggcga gccggttggt
     1621 caggggaggg cgttaacagg cgggccggcg aagcgggcgc cgcttcgccc gtcatgcttg
     1681 tcccggaccc gatcagatca tgcggcgcaa gacaaaagcc gcgtgcaact ccggcggagg
     1741 cgatcccgct tccggacgct cccactcagg cagcgaggct gcgccagatc aggcgggagc
     1801 cggtcagcgc gttgggaacg cccggcatcg gcatccagtg cgtgagcagg gcggtgtcgt
     1861 tgccgttcaa ttgttccgga tgccgcatgc gcgggaccca ggcctcgcgc gcggtatcga
     1921 aggtcgcgat catggctccc cagcgcaggg aatagatgag gacgctctga tcgcgcggcg
     1981 ccgtcgagat cgggcgccat tgcagactct caccattggt catgttcgtt ccccaaacct
     2041 accgtgtcca agatcggcct tggtcggccg ccctggagcc gttgcgattc gaggtcaatt
     2101 gttaggattg cggtatttcc cgacgatgtc gccgattgtt tcggggatgt ttcggcagga
     2161 acagcccttc aggccgccgg ggcggcgcgt ccgcgccgga gccggaacag cgcccctcgg
     2221 ctggccccca gagaggaact tcactccgcc gggcgggttg atctcgcaga cttcatccta
     2281 tgcagggagg cagagagatg actcgtggtc agttgcgccc cgtcgtcgtc gcgtttggtc
     2341 tcgtaatc
//
LOCUS       DATAIQ010000771         1606 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_64214, whole genome shotgun sequence.
ACCESSION   DATAIQ010000771 DATAIQ010000000
VERSION     DATAIQ010000771.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1606)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1606)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1606
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_64214"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..759)
                     /locus_tag="VHN20_12765"
     CDS             complement(<1..759)
                     /locus_tag="VHN20_12765"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF004127.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HEX2726684.1"
                     /translation="MTDTRDVITVKEGLAGRLRLNRPKALHSLNRQMVRDMGHALHAW
                     RDDPDVRIILIDHAEGRGFCAGGDVVDISQNVEGHEAAARAFFFDEYRLNHLEYTYPK
                     PGVAFMDGVTMGGGVGIACPCRYRVATERTVLAMPETTIGIFPDVGGGRYLSRLRGRM
                     AQFLALTGARLDGAECLKLRLATHYLPSARLEEAKQRIMAQPFRVQAILDELSEEDVP
                     EARIAGNLGKIDRYFDSDQLEEILDALDAGAAEGD"
     gene            complement(771..>1606)
                     /locus_tag="VHN20_12770"
     CDS             complement(771..>1606)
                     /locus_tag="VHN20_12770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="class I poly(R)-hydroxyalkanoic acid synthase"
                     /protein_id="HEX2726685.1"
                     /translation="IEEAARRTKGRPDLFSFCLGGTLAAIALAWLAAKDRGGEVNSAS
                     LIGSLVDFSDMRDWSAFVHEGHLVALEDHLEAQGYIDSVELQRLFAAMRANDLIWSSV
                     IDHYLLGREAPPSDLLTWFEDGARIPAAFLKSYNRDLLKDNKLKDPAGFQVGDVAIDL
                     AKIETPLLVIALKDDHVSAWEAVYRGARDLGAGFVLGGSGHNAGVINPPSRNKHGFWT
                     NDERPENAADWLAGATRHEGSWWPWWIEWLAARGTGKSVPARGIDDGIEPAPGSYAMM
                     P"
BASE COUNT          252 a          532 c          546 g          276 t
ORIGIN      
        1 gtcgccctca gcggcgccgg cgtcgagcgc gtcgaggatc tcttccagct ggtcggagtc
       61 gaaataacgg tcgatcttgc cgaggttgcc ggcgatcctc gcttcaggga cgtcctcttc
      121 gctcagttcg tcgaggattg cctggacacg aaacggctgg gccatgatcc gctgcttggc
      181 ttcctcgagc cgcgccgagg ggaggtagtg ggtcgccagc cgcagcttga ggcattccgc
      241 gccgtcgagc cgcgccccgg tcagggcgag gaattgcgcc atccgcccgc gcagccgcga
      301 cagatagcgg ccgccgccga cgtcgggaaa gatgccgatg gtcgtctcgg gcatcgccag
      361 cacggtgcgc tcggtggcga cgcgatagcg gcacgggcag gcgatcccga cgccgccgcc
      421 catcgtcacc ccgtccatga aggcgactcc tggcttgggg taggtatatt cgaggtggtt
      481 gaggcgatat tcgtcgaaga agaaggcccg cgccgccgct tcatggcctt cgacattctg
      541 gctgatgtcg acgacgtcgc cgccggcaca aaagccgcgg ccctccgcat ggtcgatcag
      601 gatgatgcgc acgtccgggt cgtcgcgcca ggcgtggagc gcgtgtccca tgtcgcgcac
      661 catctgccgg ttgaggctgt gcagcgcctt gggccgattg agccggagcc gcccggcgag
      721 gccctctttc accgtgatca cgtcgcgcgt gtcggtcact gcatccatcg tcagggcatc
      781 atcgcgtagg agccaggcgc cggctcgata ccatcgtcaa tgccgcgtgc cggtaccgac
      841 ttgccggtgc ccctcgcggc gagccactcg atccaccacg gccaccagct gccctcgtgg
      901 cgggtcgcgc cggcgagcca gtccgcggcg ttttcagggc gctcatcatt ggtccagaag
      961 ccgtgcttgt tgcggctcgg gggattgatc acgccggcat tgtggcccga gccgccgagg
     1021 acgaagccgg cgccgagatc gcgcgcgccg cgatagaccg cctcccacgc cgagacatgg
     1081 tcgtccttga gcgcgatgac cagcagcggg gtctcgattt tcgcgagatc gatggcgacg
     1141 tcgccgacct ggaatccggc cgggtccttg agcttgttgt ccttcaagag gtcgcgattg
     1201 tagctcttga ggaaggcggc ggggatgcgc gcgccgtcct cgaaccaggt cagcaaatcg
     1261 cttggcggcg cctcgcggcc gagcaaataa tggtcgatca cgctcgacca gatgaggtcg
     1321 ttggcgcgca tcgccgcgaa cagccgctga agctcgacgc tgtcgatata gccctgcgct
     1381 tcgagatgat cctcgagcgc gacaagatgg ccttcgtgta cgaacgccga ccagtcgcgc
     1441 atgtcggaga aatcgaccag gctgccgatc agggaggccg aattgacctc gccgccgcga
     1501 tccttggcgg cgagccaggc gagcgcgatc gccgccagcg ttccgccgag gcagaagctg
     1561 aacaggtcgg gccggccttt ggtccgccgc gctgcctcct cgatcg
//
LOCUS       DATAIQ010000772         5769 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_39995, whole genome shotgun sequence.
ACCESSION   DATAIQ010000772 DATAIQ010000000
VERSION     DATAIQ010000772.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 5769)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5769)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5769
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_39995"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..555)
                     /locus_tag="VHN20_12775"
     CDS             complement(<1..555)
                     /locus_tag="VHN20_12775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEX2726686.1"
                     /translation="MIKDLALVLEPGSDATVDYALSAARFFGAHLTALGIVVEPTGAI
                     GVPGASAALVLSLRDKARDEVHSMLDKVGGRAREFGVAVEREVAETTLGEADRTVARI
                     LREFDLTVVGQRDPDGPDRATGIIETALFRSGRPILVVPYIQREPMRLGSILVAWDGG
                     AQAARALGDAMPWLARAKRVEVATV"
     gene            complement(585..851)
                     /locus_tag="VHN20_12780"
     CDS             complement(585..851)
                     /locus_tag="VHN20_12780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726687.1"
                     /translation="MEDLHMHSFHAFKTLPDLQAHLDHLRPGDQLSIPSADYARLFGE
                     NDAAMGRMKNFALAHGCTISWTTSGPVLSRLPQQVPAPRAGAEL"
     gene            complement(944..1426)
                     /locus_tag="VHN20_12785"
     CDS             complement(944..1426)
                     /locus_tag="VHN20_12785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009337659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HEX2726688.1"
                     /translation="MNLRSLFSTGETRNELARTDVSPFGALQREIDRLFADFTRGWPT
                     LGVADLTPRMDVTERDGEIELTAELPGMEEKDVEITLVHNVLTIRGEKNAGKEDKDEN
                     RRIVERSYGAFSRSLELPAGINPDDITATMRNGVLTVKLPKPVQSQAEATKIAIKAAA
                     "
     gene            1656..2450
                     /locus_tag="VHN20_12790"
     CDS             1656..2450
                     /locus_tag="VHN20_12790"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEX2726689.1"
                     /translation="MPVDLGPYAADRVALAGSLADRFDSLLIGIAAQRPIPAYDEESA
                     ADATLIAAEQRRVDDDLTEVEHVFRTSSAVRNRIEWRASSAHGAEAFAVEQARAADIV
                     VLTRQGSEDAQDWRFGVSPGGFTLQAGRPVFVAPPGLASVAGQRILIAWKDTREARRA
                     VRDALPLLKQAERVFVVAVSASARSAGALDVADYLVSHGVHARTLLRDARHGSVTDEL
                     LKVVAKEQVDLLVAGAYGRTRLHEWVFGGVSRDLFDHTPVCCLMSH"
     gene            2589..3266
                     /locus_tag="VHN20_12795"
     CDS             2589..3266
                     /locus_tag="VHN20_12795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013166018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEX2726690.1"
                     /translation="MVTDVITLNVDDTVQTAAQVLLDRRISGAPVLDAQGRLVGMVSE
                     GDLIRRAEIGTEKRRSWWLELLTGAEDSARNFVRAHAVKLADVMTRDVIGASEDSSLN
                     EIATLLEKHGIKRVPIMRDGKVVGIVSRANLLQALASAIAVADATTDVARGDQALRGR
                     VVDQIRQLPWGMPWLVTVTVQNGVVELWGPVQSEGQRQALRVAAEATPGVRAVKENLY
                     RLPAAAE"
     gene            3422..4339
                     /locus_tag="VHN20_12800"
     CDS             3422..4339
                     /locus_tag="VHN20_12800"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEX2726691.1"
                     /translation="MSVNELVSPQVTGRRDSSRADGGKALPRYAAVMVHAGGDSPAAD
                     GRIALAIDIARRFGASLVGVAGEALQPPPVDPFGGGVMVGEIIDAEEERVQSNLQAAR
                     TRFETLLRTAGLETEWRSSIASPTQIIAQGARSADLVVIGREPTRSGLEAQQCPDPGD
                     LLMHAGRPLLVVPPGGNRLLAERIVLAWKDTREARRALWDALPFLTRAAAVHVVEVAA
                     ENELQAAAARVDDVARHLTRHGVAAKGEAHRRREAKVADELILVAEQNDADLIVAGGY
                     GHARLREWVFGGVTADLLRHSPKCCLLSH"
     gene            4425..5390
                     /locus_tag="VHN20_12805"
     CDS             4425..5390
                     /locus_tag="VHN20_12805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019403672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-phosphofructokinase family hexose kinase"
                     /protein_id="HEX2726692.1"
                     /translation="MRTIVTLTPNPAIDGASEADTVRPIHKVRTTNERYDPGGGGINV
                     ARVVHELGGEMLAIYMGGGATGAVLDDLLDRRALPRRRVPIADHTRISHSVFERSRGL
                     EYRFVPDGPLVTEAEWRACLAALEELRADYLVLSGSLPRGVPDDFYCRAAQVATRAGA
                     KIVLDTSGEPLRATLEAGGLELVKPSLGEFRKLVGDTLESAAAQDAAALEIVRSGRVR
                     LLAVTMGGEGALLAGKEGVLRLKPPDAVVRSAVGAGDSFVGAMTFALARGWAPESAFA
                     YGVAAGTAATLRPGTQLCSKPDVERLYAQIRERGRASERTPTSAS"
     gene            complement(5445..5762)
                     /locus_tag="VHN20_12810"
     CDS             complement(5445..5762)
                     /locus_tag="VHN20_12810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018388651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726693.1"
                     /translation="MHGYEIIAPLAASGRLNAEAWKDDRMRCTVRRFWGAERDRRGVL
                     VHRAGGAEGATWLIDYDRSTYADDESGYRLGSHAFVEGEYVSIRDEDGALHTFKVASV
                     RPV"
BASE COUNT          917 a         1900 c         1986 g          966 t
ORIGIN      
        1 gaccgttgcc acctcgaccc gcttggctct ggctagccac ggcatggcgt cgccgagcgc
       61 ccgcgcggct tgagcgccgc catcccaggc gacaaggatg ctgccgagcc gcatcggctc
      121 gcgttggata tacggaacga caaggattgg ccgcccggac cggaacaggg cggtttctat
      181 gatgccagtt gcgcggtcgg gcccgtcggg atcgcgctga ccgaccacgg tcaaatcgaa
      241 ttcgcggagg atccgcgcga ccgtcctgtc agcctctccg agagtcgtct ccgccacctc
      301 gcgctcgacc gcgaccccga actcgcgtgc ccgcccgccg accttatcca gcatgctgtg
      361 gacctcatcc ctggccttgt cgcgcagcga caggaccagg gcggcggagg ctcccggaac
      421 gccgatcgcg ccggtcggct cgacgacgat gccgagcgcc gtgaggtgcg cgccgaagaa
      481 tcgggcggca gagagcgcgt agtcgacagt ggcgtcggag ccaggctcga gcacaagcgc
      541 caagtctttg atcatcaaac gctcccgccg aaagtcaggg ctcctcagag ttctgcgccg
      601 gcgcgcggcg ccgggacctg ctggggcaac cggctgagaa caggtcccga tgtggtccag
      661 gaaatcgtgc atccatgcgc cagggcaaag ttcttcattc gtcccatcgc cgcatcgttc
      721 tccccgaaca ggcgggcgta atcggccgac ggaatgctga gctggtcgcc gggcctgaga
      781 tggtccagat gcgcctggag atccggaaga gttttgaagg catgaaagga atgcatgtga
      841 aggtcctcca aggggtcagc gtgctcgcgg agtgagatca tgcagctcga tcagaccaga
      901 gcaggatcat tcacgtgaag cgatcctgct ccggtcaacg ggttcaggca gcggccttga
      961 tcgcgatctt tgtcgcctcg gcctggcttt gcacgggctt cggcaacttc accgtgagca
     1021 caccgttcct catcgtcgcc gtaatgtcat cgggattgat gccggccggc agctcgagcg
     1081 agcgcgagaa agcgccgtag ctgcgctcga cgatgcgccg gttctcgtcc ttgtcttcct
     1141 tcccggcgtt cttttcgccg cggatcgtca gaacgttgtg gaccagcgtg atttcgacgt
     1201 ctttctcctc catccccgga agttcggccg tcagctcgat ctcgccgtcc cgttcggtca
     1261 cgtccatgcg cggcgtcagg tccgccacgc cgagagtcgg ccagccgcgc gtgaaatcgg
     1321 cgaacaggcg gtcgatctcg cgctgcagcg ccccgaaggg gctgacgtcc gttcgagcca
     1381 gctcgttgcg cgtctcaccg gtggaaaaaa gcgaacgcaa gttcatggct tcctcctcgt
     1441 cggatgccac catcgagtgg cggcatcgcg gtaattcagc accatggatc aagtcgcgcc
     1501 ttgcggaaga tcaaaccggt ccgaggccga cggacagact cgtggcgcga gccccgtgac
     1561 cccttgcggt aagtcaagtc gcgctgctgc cctttgcgtc agcatcgggc catgtggatg
     1621 gaaaggactg tgcgatgacc tacatgagag tgctggtgcc ggtcgacctc gggccgtatg
     1681 ccgcagaccg ggtcgccctg gccggtagct tggcggatcg gttcgacagc ctgttgatcg
     1741 gcatcgcggc gcagcgcccc ataccggctt atgacgagga atcggcggcc gatgcgacgt
     1801 tgatcgcggc cgagcagcgt cgcgttgacg acgacctgac cgaagtcgaa cacgttttcc
     1861 gtaccagttc ggccgttcgc aacaggatcg agtggcgcgc ttcctcggcg cacggggcgg
     1921 aggctttcgc ggtggagcag gcgcgtgccg ccgacatcgt cgtgctgacg cgccagggat
     1981 cggaggacgc gcaggactgg cgcttcggtg tgagcccggg cgggttcacg ctgcaggccg
     2041 gtcgtccggt cttcgtcgct cctccgggcc tcgcatctgt cgcggggcag cgcattttga
     2101 tcgcctggaa ggatacccgg gaggcaaggc gcgccgttcg cgatgcgttg ccgctgctga
     2161 agcaggcgga gcgggttttc gttgtcgccg tcagcgcaag cgcccgctcc gccggggcgc
     2221 tcgatgtggc cgactacctc gtgtcgcacg gcgttcacgc ccggaccttg ttgcgggacg
     2281 ctcgccacgg gagcgtcacc gacgagctcc tgaaggtcgt cgccaaagag caggtcgatc
     2341 tcttggtcgc cggcgcctac ggccgcacgc gcctgcacga atgggtgttt ggcggcgtca
     2401 gccgcgacct gttcgaccac acgcccgtgt gctgcctgat gagccattaa gcgcgatcgg
     2461 ccgtccgcgg gctgcgttgc gcgaggggcc gcccccgggg cggtttgatc aggatcaatt
     2521 cgaggccctg ccaatcggtc catggtcaag ctgatcgagg gaggatcgcc atgaaagccg
     2581 ccgatattat ggtcaccgac gtgatcacgc tcaacgtgga cgacaccgtt cagacagctg
     2641 cccaggtttt gctcgatcgg cggatcagcg gcgcccccgt gttggatgca caagggcgcc
     2701 tggttggcat ggtcagcgag ggtgacctca tccgccgggc cgagatcggc acggaaaaac
     2761 gccgttcgtg gtggctcgag ctgctcactg gcgccgagga ctcggcccgc aattttgtcc
     2821 gcgcgcatgc cgtgaagctc gcggacgtga tgacgcgaga cgtgatcggc gcgagcgaag
     2881 acagctcgct caacgagatc gcgaccctgc tggagaagca cggcatcaag cgggtgccga
     2941 tcatgcgcga cggcaaggtg gtcgggatcg tgagccgcgc caacctcctc caggctcttg
     3001 ccagcgccat cgccgtcgct gacgcgacga ccgatgtggc ccgaggcgat caggcgctgc
     3061 gcgggcgggt ggtcgatcag atccggcagc tgccctgggg gatgccgtgg cttgtgaccg
     3121 tcacggtcca gaacggggtc gtcgaattgt gggggcctgt ccaatccgag ggacagaggc
     3181 aggccctccg tgtcgctgcg gaggcgacgc cgggcgtgag ggcggtcaag gaaaaccttt
     3241 atcgcctgcc ggccgcggcg gagtgatgtt ccgggctgtt ggcgttgcgg cttgacggac
     3301 cccgacgggt gggcgcaacg ctcttgcgat cgattgacgt ggcgcaaggc gccgggacgc
     3361 gagctgatgc tgatcggcca tgtcatggcc atgtcctggc gatgtcgaga aggagcatgc
     3421 catgagcgtc aacgagcttg tttctccaca agtaacgggg cggcgcgaca gcagccgcgc
     3481 tgacggcgga aaggcgctac cgcgctacgc cgccgtgatg gttcatgcgg ggggcgacag
     3541 ccctgccgcg gacgggcgca ttgccctagc catcgatatc gcgcggcgct tcggtgccag
     3601 cctggtcggg gtcgcgggag aggcgctcca gccgccgccg gtggacccgt tcggcggcgg
     3661 cgtcatggtc ggcgagatca tcgatgccga agaggagcgg gtgcagtcga atctgcaggc
     3721 ggcccgcacc cgctttgaga cgctgcttcg aacggcaggg ctcgaaaccg aatggcgaag
     3781 ctcgatcgcc tcaccgacgc agatcattgc ccagggggca cgctcggccg acctggtggt
     3841 gatcgggcgc gagcctacgc gttcggggct cgaggctcag cagtgccccg atcctggtga
     3901 cctgctcatg cacgccggcc gtcccctgct agtggtccct cccgggggca atcgcctgct
     3961 cgcggaacgg atcgtgctcg cctggaagga cacccgcgaa gcccggcgag ccctctggga
     4021 cgccctgccg ttcctgaccc gcgccgccgc cgtccatgtg gtcgaggtgg ctgccgagaa
     4081 cgagcttcag gccgccgcgg cgcgcgtcga tgatgtcgcc cgtcatctga cgcgccatgg
     4141 cgttgcggcc aaaggcgagg ctcacaggcg ccgtgaagcg aaggtcgctg acgaactgat
     4201 cctcgtcgcg gagcagaacg acgccgatct gatcgtcgcc ggcggctacg gccacgcgcg
     4261 cctgcgcgaa tgggtgttcg gcggcgtcac ggcggacctt ttgcggcact cccccaagtg
     4321 ctgtctgctg tcgcactagc gctgttccag gatagcgtcc ctccgctgcc cggctctccg
     4381 ggcagcggcg cgccgccgtc ggcaagcacc ccgcggtgga tctgatgcgg actatcgtca
     4441 cgctgacgcc gaacccagcc atcgacggtg ccagcgaagc ggacaccgtg cgcccgatcc
     4501 acaaggtccg caccaccaac gagcgctacg acccgggcgg cggcggcatc aacgtggcgc
     4561 gcgtcgtcca cgagctcggc ggcgaaatgc tcgccatcta catgggaggc ggcgccaccg
     4621 gggcggtgct cgacgacctg ctcgaccgcc gcgccctgcc gcgccgccgc gttcccatcg
     4681 cggatcacac gcgcatcagc cactcggtct tcgaacggtc gcgcggcctc gaataccgct
     4741 tcgtgcccga tggacccctc gttacggagg cggagtggcg ggcctgcctc gcggcgctcg
     4801 aggagttgag ggccgattat ctcgtgctca gcggaagcct gccccgcggc gtccccgacg
     4861 acttctattg ccgggccgct caggtcgcca cgagggccgg cgcaaaaatc gtgctcgaca
     4921 cgtcgggcga acccttgcgc gcgaccctgg aggcgggcgg cctcgagctc gtcaaaccca
     4981 gcctcggcga gttcaggaaa ctcgtcggcg acaccctcga gagtgctgcg gcgcaggacg
     5041 ccgcggcgct agagatcgtg cgctccggac gggtgcggct cctcgccgtc acgatgggcg
     5101 gagagggcgc gctgcttgct ggcaaagaag gcgtcctgcg cctgaagccg ccggatgccg
     5161 tggtgaggag cgccgtcggc gccggcgaca gtttcgtcgg agcgatgacc tttgcgcttg
     5221 ctcgcggttg ggcgcctgaa agcgcatttg cttatggcgt cgcggcggga acggccgcga
     5281 cgctgcggcc cggcacccag ctgtgcagca agccggatgt cgagcggctc tatgcgcaaa
     5341 tccgggaacg aggacgcgcc tccgaacgca cgcctacctc ggcatcatga gggcttcagg
     5401 ctttcgcccg ttgcgctccg aaagacggag cgcaacgtcg gcggtcaaac cggccgcacg
     5461 ctcgcgacct tgaatgtgtg cagggcgcca tcctcgtcgc ggattgagac gtattcgccc
     5521 tcgacgaatg cgtggctgcc gaggcggtag ccgctctcgt catccgcata ggtgctacgg
     5581 tcgtaatcga tcagccaggt ggcgccttcc gccccgccgg cgcgatgaac gagaacgccg
     5641 cggcggtcgc gctccgcgcc ccagaagcgg cgcacggtgc agcgcatgcg gtcgtccttc
     5701 catgcctccg cgttgagtcg gcccgatgct gcaagcggag cgatgatctc gtatccgtgc
     5761 acctcgcta
//
LOCUS       DATAIQ010000773         2315 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_317284, whole genome shotgun sequence.
ACCESSION   DATAIQ010000773 DATAIQ010000000
VERSION     DATAIQ010000773.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2315)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2315)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2315
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_317284"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..701)
                     /locus_tag="VHN20_12815"
     CDS             complement(<1..701)
                     /locus_tag="VHN20_12815"
                     /inference="COORDINATES: protein motif:HMM:NF014808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M17 family peptidase N-terminal
                     domain-containing protein"
                     /protein_id="HEX2726694.1"
                     /translation="MADAIRIEFQPFGLPKGGDLVVFAGEDGTLSETVSQRLGRDGVQ
                     LVANAARAERFKGKPQTALAIPAPAGLQFDRLIVVGIGGEKDRPKHDWRMLGGFVTGK
                     VSGRTATALVDMPGLEASAEAVAEMALGARLRAYKFDRYKTKKKDNDAENGGAATKLT
                     FAVQEPAAARKAAKQIEGLATGVTLARDLVNEPPNVLGPAEFAERAQALGKLGVETEG
                     FDDKALKKLNMRALLG"
     gene            866..2026
                     /gene="lptF"
                     /locus_tag="VHN20_12820"
     CDS             866..2026
                     /gene="lptF"
                     /locus_tag="VHN20_12820"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018044862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptF"
                     /protein_id="HEX2726695.1"
                     /translation="MDLIERYIFKIAFSAFLGCLLALTAVIWITSALRELDLLTSKGQ
                     TLVMFFTITALSLPTLVAIIAPVALFIAVIYALNRLNGDSELIVMSAAGMAPQRLLRP
                     FIWLAMMVAISMAFLTNYLMPASFQELRDLLTKVRADFVANVVKEGQFTNLDSGITFH
                     YRERSGPALLGIFMQDRREEGRTIVYLAERGQTVDLNGRSYLILEQGSVHRQVPNSRD
                     SSIVAFERYGIDLSALSQESSEVVYKPRERTTSQLVYPTTNDYYTQHQTGRLRAELHD
                     RLSSWLYPLAMMFIAFAALGDARTTRQGRGVAVAGAVIGVVALRIAAFAAPGLAVRSE
                     AGLIAVYGVPLGAIAICLLMIFQGPRVRGLGSRLTRWAGDTLVPALPRLRRA"
     gene            2031..>2315
                     /locus_tag="VHN20_12825"
     CDS             2031..>2315
                     /locus_tag="VHN20_12825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003604387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LptF/LptG family permease"
                     /protein_id="HEX2726696.1"
                     /translation="MLIGATLGRYLSARFAKSILAVFATVFALVFMIDFIELLRRSGD
                     NEGATPGFMAQLALFRTPAVAEQVFPFAVLFGSMTALLQLSRKLELVVARS"
BASE COUNT          326 a          835 c          731 g          423 t
ORIGIN      
        1 ccgaggagcg cgcgcatgtt gagctttttc agcgccttgt cgtcgaaacc ctcggtttcg
       61 acgcccagct tgccgagagc ctgggcccgc tcggcgaact cagccgggcc gagcacgttg
      121 ggcggctcgt tgacgaggtc gcgggcgagc gtgacgcccg tcgcgagacc ttcgatctgc
      181 ttcgccgcct tcctggccgc cgccggctcc tggacggcga aggtgagctt ggtcgcggcg
      241 ccgccattct cggcgtcgtt gtccttcttc ttggtcttgt agcggtcgaa cttgtaggcg
      301 cgcagccgcg cccccagggc catctcggcc acggcctcgg cgctcgcctc gaggcccggc
      361 atgtcgacca gggccgtggc cgtgcgcccg ctcaccttgc cggtcacgaa gccgccgagc
      421 atgcgccagt catgcttcgg ccggtccttc tcgccgccga tcccgacgac gatcaggcgg
      481 tcgaactgca gccccgctgg cgccgggatc gccagggccg tctgaggctt gcccttgaaa
      541 cgctcggccc gcgccgcatt ggcgaccagc tgcacgccgt cccgcccgag ccgctgcgag
      601 acggtttcgc tgagcgtccc gtcctcgccc gcaaagacga cgaggtcccc gcctttgggc
      661 agcccgaacg gctgaaactc gatcctgatg gcatcggcca tgaagggtgc tcctgtcggc
      721 cgacgaaata gcagtggccc gcaggtcaca tacagcaatt ctcgcggcaa agaaggacct
      781 ttgccgtgaa agcgccaaag tccgaccgcc ttgccttgga ggcgctcgtt cggccatgtc
      841 tcccccggca gagcgcgggc cgcctatgga tctcatcgaa cgctatatct tcaagatcgc
      901 cttcagcgcc ttcctggggt gcctgctcgc cctcacggcg gtcatctgga tcacctcggc
      961 tctgcgcgag ctcgatctgc tcaccagcaa gggccagacc ctggtgatgt ttttcacgat
     1021 cacggcgctg tcgctgccga ccctggtcgc gatcattgcc cccgtcgccc tgttcatcgc
     1081 ggtcatctac gccctcaacc gcctcaacgg cgattccgag ctgatcgtga tgagcgccgc
     1141 cggcatggcg ccgcagcggc tcctgcggcc gttcatctgg ctggcgatga tggtcgcgat
     1201 ctcgatggcg ttcctgacca attacctgat gccggccagc ttccaggaat tgcgcgacct
     1261 gctgaccaag gtgcgcgcgg atttcgtggc caacgtcgtc aaggaaggcc agttcacgaa
     1321 cctcgacagc ggcatcacgt tccactaccg cgagcgctcg gggccggccc ttctcggcat
     1381 cttcatgcag gaccggcgcg aggaaggccg caccatcgtc tatctcgccg agcgcgggca
     1441 gaccgtcgac ctcaacggcc gcagctacct gatcctcgag cagggcagcg tccaccgcca
     1501 ggtcccgaac agccgcgatt catcgatcgt cgccttcgag cgctacggca tcgacctctc
     1561 ggccttgagc caggagagca gcgaggtcgt ctacaagccg cgcgagcgca cgaccagcca
     1621 gctcgtctac ccgacgacga acgattacta cacgcagcac cagaccgggc ggctgcgggc
     1681 cgagctgcat gaccgtctgt cgtcgtggct ctatccgctg gccatgatgt tcatcgcctt
     1741 cgccgccctc ggcgacgcgc gcacgacgcg ccagggccgc ggcgtcgccg tcgccggcgc
     1801 cgtgatcggg gtcgtcgcgc tacgaatcgc tgcattcgcc gcgccgggcc tcgcggtgcg
     1861 gtcggaagcg ggcctgatcg ccgtctacgg cgttccgctc ggcgccatcg ccatttgcct
     1921 tctgatgatt ttccaggggc cgcgggtgcg aggcctcggg tcccggctca cgcgctgggc
     1981 gggcgatacg ctcgttcccg cgctgccgcg cctgcgacga gcgtgacgcc atgctgatcg
     2041 gagccaccct cgggcgttat ctttcggcgc gtttcgccaa gagcatcctg gcggtcttcg
     2101 cgaccgtgtt cgcgctcgtc ttcatgatcg atttcatcga gctgctgcgg cgctcgggcg
     2161 acaacgaagg cgccacgccc ggcttcatgg cgcagctggc cctgttccgc acccccgccg
     2221 tcgccgagca ggtgttcccc ttcgcggtcc tgttcgggag catgaccgcc ctgttgcagc
     2281 tcagccgcaa gctcgagctg gtggtggcgc gctcg
//
LOCUS       DATAIQ010000774         1745 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_455298, whole genome shotgun sequence.
ACCESSION   DATAIQ010000774 DATAIQ010000000
VERSION     DATAIQ010000774.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1745)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1745)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1745
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_455298"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            289..1647
                     /locus_tag="VHN20_12830"
     CDS             289..1647
                     /locus_tag="VHN20_12830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013502955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HEX2726697.1"
                     /translation="MSQPRDERHKDLFRPALDQIIDMDHPLVRLAGEIDWGFLEKRFG
                     AVYGPGPGQPPLPTRLVAGLFILKHTYALSDEALCARWIENPYFQYFCGEQVFRHELP
                     FDRSSMTRWRQRLGEERLSALLQESLAVAHKTGAIGGKDLQRVAVDTTVQPKAIAHPS
                     DARLLHRALVKLVDLARREGVVLRQSYVRVAKRAAIMVGRYSHAHQFRRARRELRFLR
                     SRLGRVIRDIRRKIAGNAALEERFGPQLDLAWRVRFQDQHQRGRKVYALHAPEVECIG
                     KGKARAPYEFGCKVSIATPVTQPRGGQFVLHAKALHGNPYDGHTLAPAIADLERLTGV
                     EAERIHVDKGYRGHSYANRFKVWISGQVRRVTKSIRREMRRRAAIEPVIGHLKEDHLM
                     GRNHLKGREGDRANAVLAAAGFNFSLLLRWFAELLCALLLPLLEVIAEALISPRQRLQ
                     NA"
BASE COUNT          298 a          571 c          570 g          306 t
ORIGIN      
        1 cagctgcggc ggcggttgga tgaccgccga acgacgggcg acaaacctcg cctcaaagca
       61 cccgccgtgg gcctgttctc cgcttgagga tatgaacgtc gaacggtcgg cggcctatga
      121 gtcgtccgtg aagaattccc aacgctctga gcgggcacgg taatccggtt tagcgaagta
      181 ttcgattttg caggaaagct ggggaagaac ctggttttcc tgcgtttttg attccggcct
      241 ggccgcggtc gtgattccct cgatcgtcga tcacctcggg agatcgcgat gagccagcca
      301 cgtgatgagc ggcacaagga cctgttccgg ccggcgctcg atcagatcat cgacatggat
      361 catccgctgg tgcgtctggc tggcgagatc gactggggct tcctggagaa gcgcttcggc
      421 gcggtttatg ggccgggacc cgggcagccg ccgctgccga cgcgccttgt tgccgggctg
      481 ttcatcctca aacacaccta cgcgctctct gacgaagcgt tgtgcgcgcg ttggatcgag
      541 aacccgtatt tccagtactt ctgcggcgag caggtgttcc ggcacgagct gccgttcgac
      601 cgctcatcaa tgacgcgctg gcgccagcgc ctgggtgagg aacgcctctc ggccttgctc
      661 caggagagcc ttgcggtggc gcacaagacc ggggccatcg gcggcaagga tctgcagcgg
      721 gtcgcggtcg acacgaccgt gcagccgaag gcaatcgccc atccgagcga tgcgcggctg
      781 ctgcatcgcg cgctcgtcaa gctcgtcgat ctggcgaggc gcgaaggcgt cgtcctgcgc
      841 cagagctacg tcagggtggc caagcgtgcc gccatcatgg tcgggcgcta cagccatgcg
      901 caccagttca ggcgcgcccg tcgcgagctc cgcttcctgc gtagccggct cggccgcgtc
      961 atccgcgaca tccgccgcaa gatcgccggc aacgcagccc tcgaagagcg cttcgggccg
     1021 cagctcgatc ttgcctggcg ggtgcgcttc caggaccagc accagagggg gcgcaaggtc
     1081 tatgcgctgc atgcgcccga ggtcgagtgc atcggcaagg gcaaggcgcg agcgccctat
     1141 gagttcggct gcaaggtgag cattgcgacg ccggtcacgc agccgcgcgg cggccagttc
     1201 gtgctgcacg ccaaggcgct gcacggcaat ccatacgatg gccataccct ggcgccggcg
     1261 atcgccgatc tcgagcgcct gaccggcgtc gaggccgagc gcatccacgt cgacaagggt
     1321 tatcgcggcc acagctatgc caaccgcttc aaggtgtgga tctcgggcca ggtgcggcgc
     1381 gtcaccaaga gcatccggcg cgagatgcgc cgcagggccg ccatcgagcc ggtgatcggc
     1441 cacctgaagg aagatcacct catgggccgc aaccacctca agggacgtga aggcgaccgc
     1501 gctaacgccg tgctggctgc agccggcttc aacttcagcc tgctcctgcg ctggttcgcg
     1561 gagcttttgt gcgccttgtt attgccactg ctcgaggtga tcgccgaggc actcatctcg
     1621 cctcgccagc gcctccaaaa cgcgtgacct acgcattctt cacggacgac ctatgaggct
     1681 cgccttcggc tcacagtaca gcaggatgag cgttgagccg acccgctccg gcgagaggcc
     1741 tttac
//
LOCUS       DATAIQ010000775         2322 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_455361, whole genome shotgun sequence.
ACCESSION   DATAIQ010000775 DATAIQ010000000
VERSION     DATAIQ010000775.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2322)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2322)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2322
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_455361"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..819)
                     /gene="metF"
                     /locus_tag="VHN20_12835"
     CDS             complement(<1..819)
                     /gene="metF"
                     /locus_tag="VHN20_12835"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: protein motif:HMM:NF014296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004489 - methylenetetrahydrofolate
                     reductase (NAD(P)H) activity [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase [NAD(P)H]"
                     /protein_id="HEX2726698.1"
                     /translation="MRIADILSRKRPIFSFEFFPPKTDEAARQLELTIADLGPLEPDF
                     VSVTYGAGGSTREKTLDVVTRIKQDTGIEAMAHLTCAGSKREELRAVLDRLIESGVEN
                     VLALRGDPPKGQTAFTPVDGGFRYASELVEFIHAHYPGRLCVGGAGYPEKHIECANPA
                     VDLQNLKRKVETGAAFIVTQLFFDNRRYFEFVEFARAQGITVPIVPGIMPITSAAQIE
                     KMTMICGASIPFRLAAELDRRRNDPEAVAQLGIAHATAQSLDLLQNGAPGIHFYT"
     gene            complement(825..2135)
                     /gene="thrC"
                     /locus_tag="VHN20_12840"
     CDS             complement(825..2135)
                     /gene="thrC"
                     /locus_tag="VHN20_12840"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004795 - threonine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HEX2726699.1"
                     /translation="MTHAQLTCFEPSCRAAYAITDIIYNCPKCGGLLEATYSGDRTDP
                     YTLRQLWRDRRTDNSDINQSGVWRYREIIPFLDDPAHITTLREGSTPLLPAPLAARYA
                     GLDRLVFKHQGFNPTGSFKDNGMTCGVAQARRLGMTRVACVSTGNTSASMAAYAAAAG
                     LQPVIFIPHGNISYGKLAQALEYGARTLQVEANFDQILKLVRALSERLGIYLLNSINP
                     FRIEGQKTIVVELMDQRDWTPPDWLALPGGNLGNVSAFGKALRELLDYGLIDRLPRLA
                     VVQAEGAAPFYDYMHAGGGTGTFHPVEHPETLATAIKIGDPVSWPKARHEIETTGGVV
                     EKVTEQEIADAKAQIGRSGIGCEPASAATLAGIRKLRAAGTIGPGADVVAVLTGNLLK
                     DPDYIYRYHTGTLDSPSGRIQPNFGNQPTVVSNDSDKIADLLSH"
BASE COUNT          402 a          667 c          830 g          423 t
ORIGIN      
        1 cgtgtagaag tgaatgcccg gagcgccatt ctgcagcaga tcgagggact gggcagtcgc
       61 gtgggcaatg cccaattggg cgacggcctc gggatcgttg cgccgccggt cgagctcggc
      121 ggccagacgg aacgggatcg acgcgccgca gatcatggtc atcttctcga tctgtgcggc
      181 ggacgtgatg ggcatgatgc cggggacgat cggcaccgtg atcccctggg cgcgagcgaa
      241 ttcgacgaac tcgaagtagc gccggttatc gaagaagagc tgggtcacga tgaaggcagc
      301 gccagtctcc accttgcgtt tgagattctg cagatccaca gccggattgg cgcattcgat
      361 gtgcttctcc ggataacctg cgccgccaac gcacaggcgt cccgggtaat gcgcatggat
      421 aaactcgacg agctcactcg cgtaacggaa gccgccgtct accggagtga atgccgtctg
      481 ccccttgggc ggatcgccgc gcagtgccag tacgttctcg acgccggatt cgatgaggcg
      541 gtccaggacg gcacgaagtt cttcgcgctt agaaccggcg caggtgagat gcgccatcgc
      601 ctcgataccg gtgtcctgct tgatgcgggt gacaacgtcg agggtcttct cccgcgtcga
      661 accccccgcg ccgtaggtca cggaaacgaa gtcgggctcg agcgggccga ggtccgcgat
      721 ggtcagttcg agctggcgcg ccgcctcgtc ggtcttcggc gggaagaact caaaggagaa
      781 gatcgggcgc ttccggctga ggatgtcggc tatgcgcatt ctttttagtg tgacagaaga
      841 tctgcgatct tgtcagagtc gttactaaca actgtgggct gattgccgaa attcggctgg
      901 atgcgccctg aggggctgtc gagtgtaccg gtgtgatagc ggtagatgta gtcgggatct
      961 ttgagcaggt tgccggtcag gacagcgacg acatccgcgc cggggccgat cgtgccggca
     1021 gcgcggagct tacggatgcc ggcgagagtg gcggccgatg cgggctcgca gccgatgccg
     1081 ctgcggccga tctgcgcctt ggcgtccgcg atctcctgtt cggtcacctt ctcgactacg
     1141 ccgcccgtag tctcgatctc gtgccgcgcc ttgggccagc tcaccgggtc gccgatcttg
     1201 atcgcggtcg ccagagtttc gggatgctcg accgggtgga acgtgccggt gccgccgccc
     1261 gcgtgcatgt agtcgtaaaa gggtgcggca ccctcggcct ggacgacggc gagccgcggc
     1321 agcctgtcga tgaggccata gtcgagcagt tcccggagtg ccttgccgaa ggccgacaca
     1381 ttgccgaggt tgccgccggg aagcgcgagc cagtcgggcg gggtccagtc gcgctggtcc
     1441 atgagctcga cgacgatggt cttctgccct tcgatgcgga acgggttgat ggagttgagg
     1501 agatagatgc cgagccgctc ggagagggcg cggacgagct tgaggatctg gtcgaagttg
     1561 gcttcgacct gcagcgtacg cgcgccgtac tcgagggcct gcgcgagctt gccgtacgag
     1621 atgttgccgt gcgggatgaa aataacgggc tgcaggccgg cggccgcggc ataggccgcc
     1681 atcgaagccg acgtgttgcc ggtggagacg caggcaacgc gggtcatgcc gagccggcgc
     1741 gcctgggcga caccgcaggt catcccgtta tccttgaatg agccggtcgg gttgaagccc
     1801 tgatgcttga agacaaggcg gtcgagtccg gcatagcgag cggcgagcgg cgcgggcagc
     1861 agcggcgtcg atccctcgcg caacgtggtg atatgagccg ggtcgtcgag gaaggggatg
     1921 atctcacggt agcgccacac gccgctctgg ttgatgtcgc tgttgtcggt gcggcgatcg
     1981 cgccagagtt ggcgaagcgt gtaggggtcg gtgcggtcgc cggaataggt cgcttcgagc
     2041 agcccgccgc atttcgggca gttgtagatg atgtcggtga tcgcgtacgc ggcccggcag
     2101 gacggctcaa agcaggtgag ctgtgcgtga gtcaaagtcg attatagcgg ccggtgcgag
     2161 tgatgcccgc gcagcgcacg aagcgttacc ctgagttcca tgcagcggca actacaggac
     2221 ctggccggca tcggaccggc gatgatggcg gacttcaagc tcctcggcat cgggtcggtg
     2281 gagcaactcg ccacgtgcga accggctgca ctttacaacg ag
//
LOCUS       DATAIQ010000776         2931 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_455362, whole genome shotgun sequence.
ACCESSION   DATAIQ010000776 DATAIQ010000000
VERSION     DATAIQ010000776.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2931)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2931)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2931
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_455362"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..471
                     /locus_tag="VHN20_12845"
     CDS             <1..471
                     /locus_tag="VHN20_12845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015933716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1849 family protein"
                     /protein_id="HEX2726700.1"
                     /translation="GEAELARGQLAIRLRRPRPETVTVAQAPLFPSEHMKRLITAARS
                     GENTVAVSVFDGSDDGKKVYETLAVIGRRIEPGRTDALEAAARQESLVQLSRWPVTLS
                     YFSPGDGERTPIYVLSFEMYENGVSRALRLDYGEFALQGDMQSIDFLPQSACRR"
     gene            complement(574..1848)
                     /locus_tag="VHN20_12850"
     CDS             complement(574..1848)
                     /locus_tag="VHN20_12850"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HEX2726701.1"
                     /translation="MPAPPICRDCLAVMERAPGRGRCVHCGSPRLLAHADSDALAIAH
                     VDCDAFFAAIEKRDNPSLRDRPVIVGGGRRGVVATACYVARTFGVHSAMPMFQALKAC
                     PHAVVIPPNIGKYGEVGHQVRQLMRELTPLVEPVSIDEAFLDLTGTERLHHASPALTL
                     LRFTRRVEQEIGITVSVGLSYNKFLAKIASDMEKPRGFSVIGRSEAAAFLRDRPVGLI
                     PGIGKAAQARLAKAGVTLIRHLRETPAERLVPVLGRDAGRLARLADGEDDRTVTPEHE
                     TKSISAETTFETDLASFDDLEPILWGLCEKVAHRLKRSHLAGRSVTLKLKDVGFRLRT
                     RSRSSLPATQLAARLFAPARVMLRNECGGTAFRLIGVAASDLCDEAEADRGDLADRHV
                     VREAQMEAAVDRIREKFGRNAVQKGLALRSRS"
     gene            complement(1853..2143)
                     /locus_tag="VHN20_12855"
     CDS             complement(1853..2143)
                     /locus_tag="VHN20_12855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019403537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3572 domain-containing protein"
                     /protein_id="HEX2726702.1"
                     /translation="MALRKTINQSQAEEIAVKALGLLASDPERLARFLALTGLGPETI
                     RGAAASPGFLGAVLDYVAADEALLMAMVNEMDERPEIVIQARDLLAPPAAGD"
     gene            2247..2618
                     /locus_tag="VHN20_12860"
     CDS             2247..2618
                     /locus_tag="VHN20_12860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018045229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX2726703.1"
                     /translation="MKKTVLIVEDNELNMKLFNDLLEAHGYATLKTASGIEAIELARA
                     HHPDLILMDIQLPEVSGLEVTKWLKEDDDLKSIPVVAVTAFAMKGDEERIREGGCEAY
                     LSKPISVAKFLETVRIYVGDG"
     gene            2634..>2931
                     /locus_tag="VHN20_12865"
     CDS             2634..>2931
                     /locus_tag="VHN20_12865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017487119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX2726704.1"
                     /translation="MSARILVVDDLVANVKLLETKLAAEYFDVVSAVNGPDALAICEQ
                     GLCDIVLLDVMMPGMDGFEVCRRIKGSPATAHLPVIMVTALDQPGDRLRGLDAGA"
BASE COUNT          508 a          949 c          992 g          482 t
ORIGIN      
        1 ggtgaggcgg aactcgcccg tggccagctc gcgatccggc tcaggcggcc gagaccggag
       61 accgtcacgg tggcgcaggc gccgttgttt ccatccgagc acatgaaacg cctgatcacg
      121 gccgcgcgca gcggcgagaa cacggttgcg gtcagcgtct tcgacggctc cgacgacggc
      181 aaaaaagttt acgaaacact ggcggtgatc ggccggcgca tcgagcccgg caggaccgac
      241 gcgctcgagg cggccgcgcg gcaggaaagc ctcgtccagc tgtcgcgctg gcccgtgacg
      301 ctcagctatt tctcgcccgg ggatggcgag cgcacgccga tctacgtgct ctcgttcgaa
      361 atgtacgaga acggcgtcag ccgcgctctg cgtctcgact acggcgaatt cgccttgcag
      421 ggtgatatgc agagcatcga ctttctgccg caaagcgcct gccggcggta ggcgcggcgt
      481 cgctccagat gctcctgcgc agctctttcg acgcgatcat gtccgccaga gctgttccag
      541 tccgggtcag agccagagca gaatttgcaa cgatcatgac cgggagcgca gcgccagacc
      601 tttctggacg gcgttgcgtc cgaacttctc ccggatacgg tcgacggcag cttccatctg
      661 cgcttcgcga acgacgtgac gatcggcgag atcgccgcga tccgcttcgg cttcgtcgca
      721 caggtctgac gccgcgacgc cgatcaggcg gaaggccgtg ccgccacatt cgttgcgcag
      781 catcacgcgc gccggcgcga acagccgggc cgccagctgc gtcgccggca ggctggaacg
      841 gctgcgcgtg cgcaggcgga agccgacgtc tttcagcttg agcgtcacgc tgcgcccggc
      901 aagatgcgag cgcttgaggc ggtgggcaac cttttcgcaa aggccccaca ggatcggctc
      961 gaggtcgtcg aaactcgcca ggtccgtctc gaacgtggtc tcggcagaga tgctcttggt
     1021 ctcgtgttcc ggtgtcaccg tgcgatcgtc ttcaccgtcg gcgagccgcg ccagccgccc
     1081 cgcgtcgcgg ccgagaacgg gcacgaggcg ctccgccggc gtttcacgca aatgccggat
     1141 cagggtcacg ccggccttgg cgaggcgggc ctgggcggcc ttgccgatgc cggggatcag
     1201 gccgaccggg cgatcccgca ggaaggcggc ggcttcggag cggccgatga ccgaaaagcc
     1261 gcgcggcttc tccatatccg aggcgatctt ggccaggaac ttgttgtacg agagaccgac
     1321 cgagaccgtg atcccgatct cctgctcgac gcgtctcgtg aagcgcagga gggtcagggc
     1381 agggctcgcg tgatgcagcc gctcggtgcc ggtgagatcg aggaaggcct cgtcgatcga
     1441 taccggctcg accagcggcg tgagctcgcg catcagctgt cgcacttgat ggccgacctc
     1501 gccgtatttg ccgatgttcg gcgggatcac gaccgcatgc gggcacgcct tcaacgcctg
     1561 aaacatcggc atggcggagt gtacgccgaa cgtgcgcgcc acgtaacagg cggtcgccac
     1621 gacgccgcga cgaccgccgc cgacgatcac cgggcggtcg cgcagggacg ggttgtcgcg
     1681 cttctcgatg gccgcgaaga acgcgtcgca atccacatgc gcgatcgcca gcgcgtcgct
     1741 gtcggcatgg gccaggaggc gcggcgagcc gcaatggacg cagcgcccgc gcccgggcgc
     1801 ccgctccatc acggcgaggc aatcccggca aatcggtgga gcaggcatga gctcagtcgc
     1861 ccgctgctgg cggggcaagg aggtcgcggg cctggatgac tatctcgggc ctttcgtcca
     1921 tttcgttaac catggccatg agcagcgctt cgtccgcagc gacataatcg agcaccgctc
     1981 ccaggaagcc gggggaggcg gccgcccccc ggatcgtctc gggcccgagg ccggtcaggg
     2041 ccaggaaacg ggccagccgc tccgggtcgg acgccaggag gcccaaggcc ttaacggcaa
     2101 tttcttcggc ttgcgactgg ttaatggttt tgcgaagggc catggcggat tcgatttgcc
     2161 tttcgtcaat aggtctttgg taggttaaca cgttaccgga cggcgagcgg catggcgttt
     2221 cgcccggcgt tctgggagta gcagcaatga agaagaccgt cctgatcgtt gaggacaacg
     2281 agctcaacat gaagctcttc aatgatcttt tggaagcgca cggctatgcc acgctgaaga
     2341 cggcgagcgg catcgaggcg atcgagctgg cgcgggcgca ccaccccgac ctgatcctga
     2401 tggacatcca gcttcccgag gtgtcaggcc tcgaggtgac caagtggctc aaggaagacg
     2461 atgatctgaa gtccattccc gtggtcgccg tgacggcctt cgccatgaag ggcgacgagg
     2521 agcgcatcag ggaagggggc tgcgaggcct atctgtcgaa gccgatctcg gtggcgaagt
     2581 tcctcgagac cgtgcgaatc tatgtcggcg acggctgaac caaggacatt gccatgagcg
     2641 cccgcatcct cgtcgttgat gacctcgttg ccaacgtcaa gcttctcgag acgaagctcg
     2701 ccgcggaata tttcgacgtc gtcagcgccg tgaacgggcc cgacgcactc gccatctgcg
     2761 agcagggcct gtgcgacatc gtcctgctcg acgtgatgat gcccggcatg gacggcttcg
     2821 aggtgtgccg gcgcatcaag gggtcgcccg cgacggcgca cctccccgtc atcatggtga
     2881 ccgccctcga ccagcccggc gaccgcctgc gcggcctcga cgccggcgcc g
//
LOCUS       DATAIQ010000777         2344 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_202898, whole genome shotgun sequence.
ACCESSION   DATAIQ010000777 DATAIQ010000000
VERSION     DATAIQ010000777.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2344)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2344)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2344
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_202898"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(210..1829)
                     /locus_tag="VHN20_12870"
     CDS             complement(210..1829)
                     /locus_tag="VHN20_12870"
                     /inference="COORDINATES: protein motif:HMM:NF012698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HEX2726705.1"
                     /translation="MTLAFAECELDPARQELRRAGEVVHVEPQVFRLLLLLIENRDRI
                     VSKDEILDAVWDGRIVSEAALSSRINAVRRAIGDNGNDQTLVRTLHKRGFRFVGEVQT
                     VADNAALVTAGAASDADSNGVPHAIPLDASRHPFSAEPFGDKPSIAVLPFANLSADPS
                     NDYFSYGLTEDIIRLLGRNRWLTVLTRHSTVAYRDREVDPRELGAALGVRYLVQGTVQ
                     KSGDHVRIGAELVSAGDGSLLWSELYEMDLQDIFEIQNAMAQQIAAVIEPELGSVERL
                     LASRKVPTNLNAWDCYQRGFWHLWGFTNPGFAEAESLFRRAIALEPGLARAHGGLSLV
                     HLQTAFHGNPGDRPALLQAALAEAKAAVALDARDAFCHCVLGRAHSLLRNSAEAIEEL
                     ELTIELNPSFAQGYFALGFALTWCGREDEAISLFERAAELSPRDPHLWAFYHIRALAH
                     LSLGELKSAEFAARKSVMQPNAPYWPYATLVATLGLMDRPADAAPFLSELLARQPGYN
                     QTYGHNDFFFCADETFIEKYTEGLRRAGVPE"
     gene            2093..>2344
                     /locus_tag="VHN20_12875"
     CDS             2093..>2344
                     /locus_tag="VHN20_12875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726706.1"
                     /translation="MTRGNPQMPFVRQARPEDGPDLRPMQALSLRVLAAGYYTAAQIE
                     AFLAWVGTMDDFLLHEGTYYIAVDDGAIIASGGWSRRQPN"
BASE COUNT          405 a          748 c          810 g          381 t
ORIGIN      
        1 gcgatgccct cgcccaggac gcctcgcgcg acgcgaggca aatgggcact cagcaacgac
       61 acagacatcg aaacctcctg tgactgcagc ggccatgacg gccggcgata tgccgcgttt
      121 gtgcccgcga tcgcccggcg atgcttgcag gaaaggttgg gaagagctgg agattgcttt
      181 gatattgcgg gggagggcgc ggcccggcgc tattccggaa cgccggcgcg gcgcaatcct
      241 tcggtgtatt tctcgatgaa cgtttcgtcg gcgcaaaaga agaaatcgtt gtggccgtaa
      301 gtctggttgt agcccggctg gcgcgcgagg agctcggaca ggaacggcgc cgcgtcggcc
      361 ggacggtcca tcagcccgag cgtcgcgacc agcgtcgcat atggccagta gggcgcgttc
      421 ggctgcatga cggattttcg ggccgcgaac tcggcgctct tcaattcgcc caaggacaga
      481 tgagccaggg cgcggatatg gtagaaggcc cagaggtgcg gatcgcgcgg gctgagctcg
      541 gctgcccgct cgaacagcga gatggcctcg tcctcgcgtc cgcaccaggt gagcgcgaag
      601 ccgagcgcga aatagccctg cgcgaagctc gggttaagct cgatggtgag ctccagctcc
      661 tcgatcgcct ccgcggagtt gcgcagcagg gagtgggcac ggcccaggac gcaatggcag
      721 aaggcgtccc gcgcatcgag cgccaccgcc gccttggctt cggcgagcgc agcctgcagc
      781 agggccgggc ggtcgcccgg attgccgtgg aaggccgtct gcaagtggac cagggacaat
      841 cctccatgcg cgcgcgcaag cccgggctcc agcgcgatgg cgcggcggaa gaggctttcg
      901 gcttcggcaa agccggggtt cgtaaagccc cacaggtgcc agaagccgcg ctggtagcaa
      961 tcccacgcat tgaggttggt cggcaccttg cgcgaggcga gcaggcgctc gacgctgccc
     1021 agttccggct cgatgacggc ggcgatctgc tgcgccatgg cgttctggat ctcgaagatg
     1081 tcctgcaggt ccatctcgta gagctcggac cacaacaggc tgccatcgcc cgcggatacg
     1141 agctcggcgc cgatgcgcac gtgatcgccg ctcttctgga cggtgccctg cacgagatag
     1201 cgcacaccga gggctgcgcc caattcgcgc gggtcgacct cgcggtcgcg ataagcgacc
     1261 gtcgagtgcc gggtcaggac ggtcagccac cggtttcggc cgagcagcct gataatgtcc
     1321 tcggttagcc catagctgaa atagtcgttg ctcgggtccg cgctcaggtt ggcgaaggga
     1381 aggacggcaa tcgagggctt gtccccaaac ggctcggcgg agaacgggtg tcgcgacgca
     1441 tccaggggga tcgcgtgagg gacgccgttg ctgtcggcat cgcttgccgc gcctgcggtg
     1501 acgagtgcgg cattgtcggc aactgtctgc acctcgccga cgaagcggaa gccgcgcttg
     1561 tgcagcgtgc gcaccagagt ctggtcgttg ccgttgtcgc cgatggcgcg acggacggcg
     1621 ttgatgcggc tgctgagcgc cgcctccgag acgatgcggc cgtcccagac cgcgtcgagg
     1681 atttcgtcct tgctgacgat ccggtcgcgg ttctcgatca gcaggagcag cagcctgaag
     1741 acctgcggct cgacatggac cacctcgccg gcccggcgaa gctcctgccg ggcggggtca
     1801 agctcgcatt ccgcaaaggc caaggtcatc acaatcaggc cgtctcgcga tcttgcaagc
     1861 ataacacagg cctagtgtgc cccggaacct cgcgccggag atcttcgcga gccatccata
     1921 tgccgcccat ccggtgcttg cgtcggtgcg gtcgcacacg cggcagccga gcgctgggca
     1981 gcagattggc cggtgtctca agcgaatctc cagagcttct ccaggccgtc tgcatgcaag
     2041 cttcgccgaa cagtggcaaa gggcgcggcg ccgtcccgga aaggaggcag ccatgacacg
     2101 cggcaacccg caaatgccgt tcgtgcggca ggcacgaccg gaggatgggc cggacctgcg
     2161 cccgatgcag gcgctttcgc tgcgcgttct cgccgccggt tactacacgg ccgcgcagat
     2221 cgaggctttt ctcgcctggg tcggcaccat ggacgacttc ctgctgcacg agggcacgta
     2281 ctatatcgcc gtcgacgatg gcgcgatcat agcctcgggc ggctggagcc gccggcagcc
     2341 gaac
//
LOCUS       DATAIQ010000778         1861 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_409901, whole genome shotgun sequence.
ACCESSION   DATAIQ010000778 DATAIQ010000000
VERSION     DATAIQ010000778.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1861)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1861)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1861
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_409901"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..171
                     /locus_tag="VHN20_12880"
     CDS             <1..171
                     /locus_tag="VHN20_12880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012330530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HEX2726707.1"
                     /translation="TPGMLLAAQELLAREQKPSREAIREHLSGNYCRGTGYHAIVDAV
                     EATARARAGGAA"
     gene            168..>1861
                     /locus_tag="VHN20_12885"
     CDS             168..>1861
                     /locus_tag="VHN20_12885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019198547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEX2726708.1"
                     /translation="MSDTADKGSGLSVLDRPNSYIGRSVPRPNLARLLQGRGQYVSDI
                     VLPRMGHVVFVRSPHAHARIAGIDAAAAKRAPGVIAVVTGAELANVCTPWIGVLSHLK
                     GLKSAPQHAIAVERACWQGEAVAAVVGLTRAAAEDAAELVVVDYEELDAVTDMETALD
                     PATPVIHADLGDNLAFERRLDAGEVDKAFADADALVEATFHFGRHTGVTLEPRAVVAD
                     WNPGEQRLTVYQGTQAPHMMQNIIAKHLGLEEPQVRVVCKDVGGSFGIKVHVYADEMA
                     TAALSKLLRRPVKFVADRIESFVTDIHARDHRVKGRIGVTKDGRITAFEIDDLTGIGP
                     YSMYPRTSAIEANQIVNLVGGQYTCRNYRALARVVFQNKNVMCQYRAVGHPIACSVTE
                     GLVDLAAQKIGMDAAEIRRRNLIRDDAYPTDAASGLKFEALSHHASLDKLLAMMDYDA
                     LRREQARLREEGVYRGIGLASFIEVTNPSAAFYGVGGARISSQDGATVRLDATGAVIC
                     HTGVTEQGQGTEAIIAQIVATSFGVPIERVRVVTGDTDNTPYGGGTWASRAAGIGG"
BASE COUNT          302 a          674 c          625 g          260 t
ORIGIN      
        1 acgccgggca tgctgctcgc cgcgcaggag ctgctcgcgc gcgagcaaaa accgagccgc
       61 gaagcgatcc gcgagcacct ttcgggcaat tactgccggg gcaccggcta tcatgcgatc
      121 gttgatgcgg tcgaggccac cgcgcgggcc cgggccggag gagccgcatg agcgacactg
      181 ccgacaaagg ctccggcctg tccgtgctcg acaggccgaa cagctatatc ggccgctcgg
      241 tgccgcggcc gaacctcgcc cgcctcctgc aagggcgcgg ccaatatgtc agcgacatcg
      301 tgctgccgcg catgggccac gttgtgttcg tgcgctcgcc gcacgcgcat gcgcgcatcg
      361 ccggcatcga tgccgccgcg gcgaagcgcg cgcccggcgt gatcgccgtc gtcaccggcg
      421 ccgagctcgc gaatgtgtgc acgccctgga tcggcgtgct gtcgcatctg aaagggctca
      481 aatcggcgcc gcagcacgcc atcgcggtcg agcgcgcctg ctggcagggc gaggcggtcg
      541 ccgccgtcgt cgggctgacg cgcgccgcgg ccgaggacgc ggccgagctg gtcgtcgtcg
      601 attacgagga gctcgacgcc gtcaccgaca tggagacggc gctcgatccc gcgacgccgg
      661 tgatccatgc cgacctcggc gacaacctcg ccttcgagcg ccggctcgat gccggcgagg
      721 tcgacaaggc ctttgccgac gccgacgccc tcgtcgaggc gaccttccac ttcggccgcc
      781 ataccggcgt gacgctcgag ccgcgcgccg tggtcgccga ctggaacccc ggcgagcagc
      841 gcctgaccgt gtaccagggc acgcaggcgc cgcacatgat gcagaacatc atcgccaagc
      901 acctcgggct cgaggagccg caggtgcgcg tcgtgtgcaa ggacgtgggc ggctcgttcg
      961 gcatcaaggt gcacgtctat gccgacgaga tggcgacggc ggcactctcg aagctgctgc
     1021 ggcgcccggt caagttcgtc gccgaccgca tcgaaagctt cgtcaccgac atccacgccc
     1081 gcgatcaccg cgtgaagggc cgcatcggcg tcacaaagga cggccgcatc accgccttcg
     1141 agatcgacga cctcaccggc atcggcccct attcgatgta tccgcgcacc agcgccatcg
     1201 aggccaacca gatcgtcaac ctggtcggcg gccagtatac ctgccgcaac taccgggcgc
     1261 tcgcccgcgt cgtgttccag aacaagaacg tgatgtgcca gtatcgcgcc gtcggccatc
     1321 cgatcgcctg ctcggtgacc gagggcctcg tcgacctggc cgcgcaaaag atcggcatgg
     1381 acgcagccga gatccggcgc cgcaatctga tccgcgacga cgcctatccg accgacgcgg
     1441 cgtcgggcct caagttcgag gccctctcgc atcacgcctc gctcgacaag cttctggcca
     1501 tgatggatta cgacgcgctg cgccgcgagc aggcgcggct gcgcgaggag ggcgtctatc
     1561 gcggcatcgg cctcgccagc ttcatcgaag tgaccaaccc gagcgctgcg ttctacggcg
     1621 tcggcggagc gcgcatctcg tcgcaggacg gcgccaccgt gcgcctcgac gcgaccggcg
     1681 ccgtgatctg ccacaccggc gtgaccgagc agggccaggg caccgaggcg atcatcgccc
     1741 agatcgtggc gacgtcgttc ggcgtgccga tcgagcgcgt gcgcgtggtc acgggcgaca
     1801 ccgacaacac accttacggc ggcggcacct gggcgtcgcg cgccgccggc atcggcggcg
     1861 a
//
LOCUS       DATAIQ010000779         1941 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_64359, whole genome shotgun sequence.
ACCESSION   DATAIQ010000779 DATAIQ010000000
VERSION     DATAIQ010000779.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1941)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1941)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1941
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_64359"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..761
                     /locus_tag="VHN20_12890"
     CDS             <1..761
                     /locus_tag="VHN20_12890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019903803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="alkaline phosphatase PhoX"
                     /protein_id="HEX2726709.1"
                     /translation="LPLVHGQGRLTEANGFKDQGEVLIYARLAADALGATKMDRPEDI
                     EVNPKTNKVYAMLTNNNRRTDKTVDAVNPRADNRFGHIVEMTPDNLDHGSTRFTWEIL
                     LKCGDPSVADVGATFSSATSKDGWFGMPDNCAFDSQGRMWITTDGNSGVTTKRNDGVW
                     AVETEGPMRGTSKHFFRCPVGAEMCGPVFTPDDETMFVAVQHPGEDGEEWPAFNRPST
                     FDDPSTRWPDFKEGIPPRPSIVAITKRGGGKIGT"
     gene            complement(985..1416)
                     /locus_tag="VHN20_12895"
     CDS             complement(985..1416)
                     /locus_tag="VHN20_12895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020092086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726710.1"
                     /translation="MWQLVLTTLVAGLMLLGPASGGVDLVRGRTELPELVLGDGEGND
                     FAVSQKEIEMESGKSYRLSITAKGAKEYKFFAPDFFRHIWINQIVINHLEIHMQGAPR
                     HLEFDDQGTIHVEFVTIRPGEYPWYIQGLESRGMTGRFIVK"
     gene            1657..>1941
                     /locus_tag="VHN20_12900"
     CDS             1657..>1941
                     /locus_tag="VHN20_12900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013165867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX2726711.1"
                     /translation="MVQPGAEPALETARVGHRFGARQVLADVSLTVPRGRFVALLGPN
                     GAGKTTFFSILTRLYHNRAGSVRIFGHDLQRASSLALAELGVVFQSRTLDP"
BASE COUNT          343 a          678 c          614 g          306 t
ORIGIN      
        1 ggctgccgct cgtgcacgga caggggcggc tcaccgaagc gaacgggttc aaggaccagg
       61 gcgaggtgct gatctatgcc cgcctcgccg ccgacgcgct cggcgccacc aagatggacc
      121 ggcctgagga catcgaggtc aacccgaaga ccaacaaggt ctacgccatg ctgaccaaca
      181 acaaccggcg cacggacaag acggtcgacg ccgtcaaccc gcgcgccgac aaccgcttcg
      241 gccacatcgt cgagatgacg ccggacaacc tcgaccacgg gtcgaccagg ttcacctggg
      301 agatcctgtt gaaatgcggc gacccgtcgg tggccgatgt cggcgcgacc ttttcgtcgg
      361 cgacgagcaa ggacgggtgg ttcggcatgc ccgacaactg cgccttcgac agccaggggc
      421 ggatgtggat cacgacggac ggcaattccg gcgtcacaac gaagcgcaac gacggcgtgt
      481 gggcggtcga gacggaaggc cccatgcggg gcacgtcgaa acacttcttc cgctgcccgg
      541 tcggcgccga gatgtgcggg ccggtcttca cgcccgacga cgagaccatg ttcgtcgctg
      601 tccagcaccc cggcgaggat ggcgaggaat ggccggcctt caaccgcccg tcgaccttcg
      661 acgatccatc cacccgctgg cccgacttca aggagggtat cccgccccgc ccatccatcg
      721 tggccatcac caagcgcggc ggcggaaaga ttggcacatg agttcaaagc ggtgatgcgc
      781 gcgcgccggc gcccatcacc ctccgggccg gtccggagcc ggcaaggcgc aggcattcgt
      841 ccggcatgca aagcttcacg ttcgaggagg tcgcggcatc gacgaacgcc acctcattgc
      901 ccgtcgtcgg cctacgccgc gccgccgacg acgaggctga tgactgcgat cacgatcccc
      961 gttgcagccc ctcccctgtc ccgtttattt gacgatgaat cgcccggtca tgccgcggct
     1021 ttcgaggcct tggatgtacc agggatattc gccggggcgg atcgtcacga actcgacgtg
     1081 gatcgtgccc tgatcatcga actcgaggtg ccgcggtgcg ccctgcatgt ggatctcgag
     1141 atgattgatg acgatctggt tgatccagat gtggcggaag aagtccggcg cgaagaactt
     1201 gtactccttg gcgcctttgg ccgtgatgga cagccggtac gatttgccgg attccatctc
     1261 gatctccttc tgcgacaccg cgaagtcgtt cccctccccg tcgccgagca cgagctcggg
     1321 aagctcggtc cggcccctga cgaggtcgac gccgccgctg gcaggaccga gcagcatcag
     1381 cccggcaacc agcgtcgtca aaaccagctg ccacatgaca atgctccgac gggacgttga
     1441 caaccccgat ggggtcgcgg cttgctgcca cgacacgaga gagacgcgcc cggacgtcat
     1501 gagaaccata ggggacgcac gaccatcttt gaagccgccc tatggctggc ccggccgacg
     1561 cctttgcggc tcgctgcccg cagggccgaa ccgcgaaatg aacccttcga tctcgccgca
     1621 atgacgggtg ctgccgacac cacggcgccg cgcagcatgg tccagcccgg cgcggagccc
     1681 gcgctggaga cggcccgcgt cggccatcgc ttcggcgcgc gccaggtgct tgccgacgtc
     1741 tcgttgaccg tgccgcgggg ccgcttcgtc gctctgctcg gcccgaacgg ggccggcaag
     1801 acgaccttct tctcgatcct gacgcggctc tatcacaacc gcgccggcag cgtgcgcatc
     1861 ttcggtcacg acttgcagcg cgcctcttcg ctcgccctcg ccgagctcgg cgtcgtgttc
     1921 cagagccgca ccctcgaccc g
//
LOCUS       DATAIQ010000780         1543 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_40317, whole genome shotgun sequence.
ACCESSION   DATAIQ010000780 DATAIQ010000000
VERSION     DATAIQ010000780.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1543)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1543)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1543
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_40317"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..586)
                     /locus_tag="VHN20_12905"
     CDS             complement(<1..586)
                     /locus_tag="VHN20_12905"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014526833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX2726712.1"
                     /translation="MDGRLNGKIAIVFGAGSVGPGWGNGKATAVLFARNGAHVACVDV
                     NQPAADETAGIIAGEGGRASAHSCDVTDSNAVARLVADVIARHGRIDVLHNNVGYATM
                     GGPIELDEAAWQRTFDLNVTSCFITCKHVLPHMLARKSGAIVNVSSVAAIRYTGYPYT
                     AYYAAKAAVNNFTMGVALQYARDGIRVNAIMPGLM"
     gene            808..>1543
                     /locus_tag="VHN20_12910"
     CDS             808..>1543
                     /locus_tag="VHN20_12910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012331630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HEX2726713.1"
                     /translation="MAAPRLPLNALRAFETTTRLGSMSAAARELGVTHGAISRHIREL
                     EAEYGMPLLRRLPKSVEPTPAGAQLATILGEAFQLMHLGVSRLAPGPLTLSCSATIMM
                     YWLLPRLGRFQRDNPGIEVRLNVNYGEVDFVRDEISLAIRSSMFKPPQDVVIRSLLRE
                     DIGPVCHPDYAARLGLHAPEDLERARLLGTATRPGAWGEWLSAIGRSDLKIAGHEHYA
                     HFYLLIQAAVCGLGVGLAPRILVEDEI"
BASE COUNT          231 a          511 c          530 g          271 t
ORIGIN      
        1 tcatcagccc gggcatgatg gcgttcacgc ggatgccgtc acgcgcatac tggagcgcca
       61 cgcccatcgt gaaattgttc acggccgcct tggcggcgta ataggcggta taagggtagc
      121 cagtgtagcg gatggcggcg actgacgaga cgttgacgat cgcgccggac tttcgcgcca
      181 gcatgtgcgg cagcacgtgc ttgcaggtga tgaagcagct cgtgacgttg aggtcgaagg
      241 tgcgctgcca ggcggcttca tcgagctcga tcgggccgcc catggtggcg tagccgacgt
      301 tgttgtgcag gacatcgatg cggccgtgcc gggcgatcac gtcggcgacg agcctggcga
      361 cggcattgga atcggtgacg tcgcaggaat gggccgaggc gcgcccgcct tcgccggcga
      421 tgatcccggc cgtctcgtcg gccgccggct ggttgacgtc gacgcaggcg acgtgcgcgc
      481 cgttgcgtgc gaacaagacg gcggtggcct tgccgttgcc ccagcccggg ccgaccgagc
      541 cggccccgaa gacgatggcg atcttgccgt tgagccgccc gtccatccta ggcgctccgc
      601 cgcccgcggg gggcaagccg ggtctgacgg ccgtcacacg tcttggcgcg ccgaacggcg
      661 cctgctgccg gtcctggcat gtttccaccc gtccattgct agttttcaaa aggcatagcc
      721 gccggaccgc gcgtccgaca ttgcaaatcg gcgcgcgctg gtgtgagatt tcctggcatc
      781 aacggcactt gcgggagggt gccgcccatg gccgccccac gtcttccatt gaatgccctg
      841 cgcgcgttcg aaaccacgac gcggctgggc agcatgtcgg ccgcggcccg cgagctcggg
      901 gtgacgcatg gcgccatcag ccgccatatc cgcgagctcg aggccgaata tggcatgccc
      961 cttctgcgcc gcttgccgaa atcggtggag ccgactccgg ccggggctca gctggcgacg
     1021 atcctcggcg aggccttcca gctgatgcat ctcggcgtgt cgcgcctggc gcctgggccg
     1081 ctcaccctgt catgctcggc gacgatcatg atgtattggc tgctgccgcg gctgggcagg
     1141 ttccagcgcg ataatcccgg catcgaagtc cgcctcaacg tcaactatgg ggaggtcgat
     1201 ttcgtgcgcg atgagatcag cctcgccatc cggtcgagca tgttcaagcc gccccaggac
     1261 gtggtcataa ggtcgctgct gcgcgaggac atcggccccg tctgccaccc ggattacgcg
     1321 gcgcggctcg gcctgcatgc accggaagac ctcgaacggg ctcgcctcct cggtacggca
     1381 acacggccgg gcgcctgggg cgagtggctg tcggccatcg gccggtccga tctcaagatc
     1441 gccggccacg agcattacgc gcatttctat cttctgatcc aggcggcggt ctgcggcctc
     1501 ggcgtcgggc tggcgccgcg catcctggtc gaggacgaga tct
//
LOCUS       DATAIQ010000781         3114 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_410058, whole genome shotgun sequence.
ACCESSION   DATAIQ010000781 DATAIQ010000000
VERSION     DATAIQ010000781.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3114)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3114)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3114
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_410058"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2498)
                     /locus_tag="VHN20_12915"
     CDS             complement(<1..2498)
                     /locus_tag="VHN20_12915"
                     /EC_number="1.2.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003599895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004591 - oxoglutarate dehydrogenase
                     (succinyl-transferring) activity [Evidence IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase E1 component"
                     /protein_id="HEX2726714.1"
                     /translation="MARQDANEAFAQTAFLYGGNAPYIEDLYARYQRDPNSVDPEWQA
                     FFGALKDEGADVVKNAQGASWKRPNWPVPANGELVSALDGNWGRLEAALGDRIKGKAQ
                     AKGVEISQAEVMQATRDSVRALMMIRAYRMRGHLHAKLDPLGIETRNDHEELHPSHYG
                     FSEADWDRKIFLDNVLGMEFGTIREIVSILERTYCQTLGVEFMHISDPAEKAWIQERI
                     EGPDKEITFTREGKRAILNKLVEADGFEKFLDLKYTGTKRFGLDGGEAMIPALEQIIK
                     RGGALGVKEIVLGMAHRGRLNVLAQVMAKPHRAIFHEFKGGSFAPDDVEGSGDVKYHL
                     GASSDRSFDGNNVHLSLTANPSHLEIVDPVVLGKVRAKQDQHGDPPERRTSVMPLLIH
                     GDAAFAGQGVVAECLGLSGLKGHRTGGSVHFIVNNQIGFTTSPHFSRSSPYPSDVAKM
                     VEAPIFHVNGDDPEAVVFAAKVAAEYRQRFQKPVVVDMFCYRRFGHNEGDEPAFTQPK
                     MYKLIRQHPTTLEIYAKKLVGEGVVTEAEVEAMKAAFRARLDAEFDVAQSYKPNKADW
                     LDGRWAGLRAVREDVDDARRGRTGVPLATLKEIGRHLTEVPNGFHAHRTIQRFLENRK
                     KMVDTGEGIDWAMAEALAFGSLLLDGHPVRLSGQDVERGTFSQRHSVLLDQETEQRYT
                     PLNHIREGQRRYEVVNSMLSEEAVLGFEYGYSLSEPNALVLWEAQFGDFANGAQVVFD
                     QFVSSGERKWLRMSALTCLLPHGYEGQGPEHSSARLERYLQMCAEDNMQVANCSTPAN
                     YFHILRRQLKREFRKPLILMTPKSLLRHKRCVARL"
     gene            complement(2673..>3114)
                     /locus_tag="VHN20_12920"
     CDS             complement(2673..>3114)
                     /locus_tag="VHN20_12920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007199308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HEX2726715.1"
                     /translation="GIVSRSGTLTYEAVFQTTNEGLGQTTAVGIGGDPVKGTEFIEVL
                     DMFLSDPATESIIMIGEIGGAAEEDAAEFLAREARKGRKKPMVGFIAGRTAPPGRRMG
                     HAGAIIAGGKGGADDKIAAMEAAGIRVSPSPARLGKTLVEVLKG"
BASE COUNT          471 a         1012 c         1072 g          559 t
ORIGIN      
        1 aggcgcgcga cgcagcgctt atggcgcagg agcgatttcg gcgtcatcag gatgagcggc
       61 ttccggaact cgcgcttcaa ctgccggcgc aggatgtgga agtagttggc cggggtcgag
      121 cagttggcga cctgcatgtt gtcctcggcg cacatctgca gatagcgctc gaggcgcgcg
      181 gacgagtgct ccggcccctg cccctcatag ccgtgcggca ggaggcaggt gagggccgac
      241 atgcgcagcc acttgcgctc gcccgacgag acgaactggt cgaagacgac ctgggcgccg
      301 ttggcgaagt cgccgaactg cgcctcccac agcacgagcg cgttcggctc tgacagcgag
      361 tagccgtatt cgaagccgag cacggcctct tccgacagca tcgagttgac gacctcgtag
      421 cggcgctgcc cctcgcggat gtggttgagc ggcgtgtagc gctgctccgt ctcctggtcg
      481 agcagcaccg agtgccgctg cgagaaggtg ccgcgctcga cgtcctgccc cgacagacgg
      541 acgggatggc cgtccagcaa cagcgagccg aaggcgagcg cctcggccat cgcccagtcg
      601 atgccttcgc cggtgtcgac catcttcttg cggttctcga ggaagcgctg gatcgttcgg
      661 tgcgcgtgga atccgttcgg cacctcggtg aggtggcgcc cgatctcctt gagcgtggcg
      721 agcggcacgc cggtgcggcc gcggcgcgcg tcgtcgacgt cttcgcggac cgccctcaag
      781 ccggcccagc gtccgtcgag ccagtccgcc ttgttgggct tgtagctctg ggcgacgtcg
      841 aactcggcat cgagcctggc gcggaaggcc gccttcatgg cctcgacctc ggcctcggtg
      901 accacgcctt cgccgaccag cttcttcgca tagatctcca gcgtcgtcgg atgctggcgg
      961 atcagcttgt acattttcgg ctgcgtgaag gccggctcgt cgccctcgtt gtggccgaag
     1021 cggcggtagc agaacatgtc gaccacgacc ggcttctgaa agcgctgccg gtattcggcc
     1081 gcgaccttgg cggcgaacac gaccgcctcc ggatcgtcgc cgttgacgtg gaagatcggc
     1141 gcctcgacca tcttggcgac gtccgacgga tacggcgacg agcgcgagaa atgcgggctc
     1201 gtcgtgaagc cgatctggtt gttgacgatg aagtgcacgg agccgccggt gcgatgcccc
     1261 ttgagacccg acaggccgag gcactcggcc acgacgccct gcccggcgaa ggcggcgtcg
     1321 ccgtggatca gcagcggcat cacggaggtg cgccgctccg gcgggtcgcc gtgctggtcc
     1381 tgcttggcgc gcacctttcc gagcacgacc ggatcgacga tctcgagatg cgacgggttg
     1441 gccgtcagcg acaggtggac gttgttgccg tcgaaggaac ggtccgacga agcgccgagg
     1501 tggtatttca cgtcgcccga gccttccacg tcgtcgggcg cgaaagagcc gcccttgaac
     1561 tcgtggaaga tggcgcggtg cggcttggcc atgacctgcg cgagcacgtt gaggcggccg
     1621 cgatgggcca tgccgagcac gatctccttc acgccgagcg cgccgccgcg cttgatgatc
     1681 tgctcgagtg cggggatcat ggcttcgccg ccgtcgaggc cgaagcgctt ggtgccggtg
     1741 tatttcagat cgaggaactt ctcgaagccg tccgcctcga caagcttgtt gaggatggcg
     1801 cgcttgccct cgcgggtgaa ggtgatctcc ttgtcggggc cttcgatgcg ctcctggatc
     1861 caggccttct cggccggatc ggaaatgtgc atgaactcga cgccgagggt ctggcagtag
     1921 gtgcgctcga ggatcgagac gatctcgcgg atcgtgccga actccatgcc gagcacgttg
     1981 tcgaggaaga tcttgcggtc ccagtcggct tccgagaagc cgtaatgcga cgggtgtagc
     2041 tcctcgtggt cgttgcgcgt ctcgatgccg agcgggtcga gcttggcatg caggtggccg
     2101 cgcatgcgat aggcgcggat catcatgagc gcgcgcacgg agtcgcgcgt cgcctgcatg
     2161 acctcggcct ggctgatctc gacgcccttg gcctgcgcct tgcccttgat cctgtcgccg
     2221 agcgccgctt cgagccggcc ccagttgccg tcgagggccg agacgagttc gccgttggcc
     2281 gggacaggcc agttgggccg tttccaggac gcgccctggg cgttcttgac gacgtcggcg
     2341 ccctcatcct tgagcgcgcc gaagaaggcc tgccactcgg ggtcgaccga attcgggtcc
     2401 cgctggtacc tggcgtagag gtcctcgatg tagggagcgt tgccgccgta gaggaaagca
     2461 gtttgagcga aggcttcgtt cgcgtcctga cgtgccattg acctgtcttc caaacgccgc
     2521 gggagaggct tcgtggagag gaggggaagc ctcctgaaag tcggttaccg cgaccgcctt
     2581 aaagatttca cctaagatag ggatgtgacg aaggttcgtc agccccggcc cgaccaagga
     2641 acatgcgttc caagcttggc cgcagctccg tctcagccct tcagcacctc gacaagcgtc
     2701 ttgccgagcc gcgccggcga cggggagacc cggatgcccg cggcttccat ggccgcgatc
     2761 ttgtcgtccg cgccgccctt gccgcccgcg atgatggcgc cggcatggcc catgcgccgc
     2821 cccggcgggg ccgtgcgccc ggcgatgaag ccgaccatcg gcttcttgcg ccccttcctg
     2881 gcttcgcggg cgaggaactc ggccgcgtcc tcctcggcgg cgccgccgat ctcgccgatc
     2941 atgatgatcg actcggtggc cgggtccgac aggaacatgt cgagcacctc gatgaactcg
     3001 gtgcccttga ccgggtcgcc gccgatgccg accgcggtgg tctggccgag cccttcgttg
     3061 gtggtctgga acaccgcttc gtaggtcagc gtgccggagc gcgacacgat cccg
//
LOCUS       DATAIQ010000782         2520 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_40428, whole genome shotgun sequence.
ACCESSION   DATAIQ010000782 DATAIQ010000000
VERSION     DATAIQ010000782.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2520)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2520)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2520
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_40428"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1..1592
                     /locus_tag="VHN20_12925"
                     /pseudo
     CDS             1..1592
                     /locus_tag="VHN20_12925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018262811.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="AI-2E family transporter"
     gene            1661..2509
                     /locus_tag="VHN20_12930"
     CDS             1661..2509
                     /locus_tag="VHN20_12930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006932706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HEX2726716.1"
                     /translation="MRFHGTATYVATEDLKVAVNAAIVLERPLLVKGEPGTGKTVLAE
                     EIAKSVGAPMLTWHIKSTTKAQQGLYEYDAVSRLRDSQLGDLRVSDIGNYIKRGKLWD
                     AFESDTRPVLLIDEIDKADIEFPNDLLLELDRMVFHVYETGQSVRARRRPIVVITSNN
                     EKELPDAFLRRCFFHYIKFPDAETMAQIVDVHYPGIKRRLVEEALRIFFDIREVPGLK
                     KKPSTSELIDWLKLLLHEDMPLEVLQSRDTAKAIPPLHGALLKNEQDVMLFERLAFMA
                     KRQANR"
BASE COUNT          407 a          896 c          827 g          390 t
ORIGIN      
        1 agacgcccgc cacggctccg gcgggccgcg gccccgccga gcagaagccc ctgccagtcg
       61 aggtacgcga gccggacccg acgccgctgc agctcgccca acagatcctg gtgcccgtgt
      121 tcaagccgct ggccacgacc ggcatcgtct tcgtcatcgt cgtgttcatc ctgatccagc
      181 gccaggacct gcgcgaccgc ctgatccgcc tgttcgggtc gaaggacctg caccgcacca
      241 cgatcgcgat ggacgacgcc gcccggcgtc tcagccggta ttacatcgcc cagctggcgc
      301 tcaatgcagg gttcggcgtg atgatcgccg ccggcctctg gctgatcggg gtgccgagcc
      361 ccgtgctctg gggcatcttc gccgccctga tgcgcttcgt gccgtatgtc ggcgcgttca
      421 tcgccgccgc cgggccggtg gccctggctg cggcggtcga cccgggctgg tcgatggtgc
      481 tgtggaccgt ggcgctattc gccatcaccg agccgctcat gggccaggtc gtcgagccgc
      541 tcgtctacgg gcagggtacg gggctatcgc cgtttgcgat cgtggtctcg gcgatcttct
      601 ggacctggct gtggggaccg gtcgggctgg tcctcgcgac cccgctcacg gtgtgtctgg
      661 tcgtgctcgg gcgtcacgtc gagcgcctcg agtttttgga cgtgctgctt ggcgaccggc
      721 cggccctgac gccggtcgag aacttctacc agcgcatgct ggcgggcgac ccggacgagg
      781 cgctcgagca tgccgagcag ctgctgaagt agcgctccct ctcgtcctac tacgacgagg
      841 tcgcgctcaa ggcgctgcaa ctcgccgcca atgacgcgaa gcgcggcgtc ctcacccggg
      901 aacagaccga aagcatcaag gaggcgagca ccggccttgt cgccgacctc gccgagcatg
      961 acgacgtcga tccggcgccg gccgaggccg aggaagatcc cggcggggcg accctgtcgg
     1021 agaagaccct tccgaagcag ccggccctgc cggagatcgc gccgccgccc tacgagcttc
     1081 ctccggaatg gcgcggcgac gcaccggtca tgtgcatcgc cggccgcggc cccctcgacg
     1141 aagccgccgc ggcgatgctg gcgcaactcc tcgacaagca cggcctcgac gccaaggtcg
     1201 tgacgcacga cgccgtgtcg cgctccaaca tcctcggctt cgaggccgag ggcgcggcga
     1261 tgatctgcat ctcctatctc gacatcgccg gcaatcccgc ccatctgcgc tatctgctgc
     1321 gccggcttcg ccagcgcgtg cccgaggcct gcatcctggt cgggctgtgg ccggccgacg
     1381 atgccgtcct gcgcgacgac aacctgcgca cggcgattgg cgcggactat tacgtgacct
     1441 ccctgcgcga ggccgtcgcc gcgtgcctgg aggtggcgca caaggccagc gcgcgccacg
     1501 cacgcacgaa cggcaccgag acggtcgacg gcaacgcgca gccgggcgca gcggccgcga
     1561 tgcagccaga accggtcgcc gcgcgcccct gagcggtcac catggttgtc ccacgacgcc
     1621 gcgcgtggga aaaggccgcg ttcgcggaga catgcaccgg atgcgctttc acggcaccgc
     1681 cacttacgtc gccaccgagg atctcaaggt cgcggtcaac gccgcgatcg tgctggagcg
     1741 gccgcttctg gtgaaaggcg agccgggcac cggcaagacc gtgctcgccg aggagatcgc
     1801 caagagcgtc ggcgcgccga tgctgacctg gcacatcaag tcgaccacca aggcgcagca
     1861 gggcctctat gaatacgatg ccgtctcgcg cctgcgcgat agccagctcg gcgacctgcg
     1921 tgtctccgac atcggcaatt acatcaagcg cggcaagctg tgggacgcgt tcgaatcgga
     1981 cacgagaccc gtgctgctga tcgacgagat cgacaaggcc gacatcgagt tcccgaacga
     2041 cctcctgctc gagctcgacc gcatggtgtt ccacgtctac gaaacggggc agtcggtgcg
     2101 ggcgcggcgg cggccgatcg tggtgatcac gtcgaacaac gagaaggagc tgcccgacgc
     2161 gttcctgcgg cgctgcttct tccactacat caaattcccc gacgccgaga ccatggcgca
     2221 gatcgtcgat gtgcattacc cgggcatcaa gcgccggctc gtcgaggagg cgctgcgcat
     2281 cttcttcgac atccgcgagg tgcccggcct caagaagaag ccgtcgacca gcgagctgat
     2341 cgactggctc aagctcctgc tccacgagga catgccgctc gaggtcctcc agtcccgcga
     2401 cacggccaag gcgatcccgc cgctccacgg cgcgctgctc aagaacgaac aggacgtgat
     2461 gctgttcgag cggctcgcct tcatggcgaa gcgtcaggct aaccgatagc gctaccagcc
//
LOCUS       DATAIQ010000783         4617 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_410101, whole genome shotgun sequence.
ACCESSION   DATAIQ010000783 DATAIQ010000000
VERSION     DATAIQ010000783.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4617)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4617)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4617
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_410101"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            54..926
                     /locus_tag="VHN20_12935"
     CDS             54..926
                     /locus_tag="VHN20_12935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007696109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEX2726717.1"
                     /translation="MTRNIDTSLIRAFVAVAETGGMTAAANVLNLTQAAVSQQIKRLE
                     DAFQAQLFERDRRGLRLTGPGERLFAKAKRLLAVNDEIWSDMTTPIYTGEVRLGIPYD
                     IVSTYLPPVLKSFSQAYPQISISLECRPSVYLLEALDAGHLDVAITTELGCGPHGESL
                     VMDRLVWAGARGGAAHRQRPLPLTCGNESCAFRPPTLHALMAAGIDWRPVSEINNLDA
                     LNVTVQTDLSVGALLASTVPAGLEILGAESGLPGLPLFSINLYLPKAGATPVGAELAR
                     HVREGFLTRPRQAA"
     gene            1140..2402
                     /locus_tag="VHN20_12940"
     CDS             1140..2402
                     /locus_tag="VHN20_12940"
                     /EC_number="3.5.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018643695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003935 - GTP cyclohydrolase II activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase II"
                     /protein_id="HEX2726718.1"
                     /translation="MNSPNRSTHIRLTSHPEPGTAATRFPIRWGAATARERGPVIGSV
                     TNPADRNVIGAHGGAYSLYRALAISARALNPLARPDLRNTHPVVDIGPHPQWHEPGRI
                     VSLDPWGHKIGDVFGDEIAGGTDIRPSIAVTRARLNMPEILAAMTGRRLAADGEILHA
                     SGDVSVTKIAIDPVWHLPGVAERFGVSERDLRRTLFEQTGGMFPELVTRSDMQVFLPP
                     IGGITVYIVGEVAALTNPKRTVACRVHDECNGSDVFGSDICTCRPYLVHGIEECVKEA
                     QKGGAGVVVYNRKEGRALGEVTKFLVYNARKRQEGGDQAATYFERTECVAGVQDARFQ
                     QLMPDVLHWLGICRIDRLMSMSNMKYDAIVASGIEVVERVPIPDELVPPDAQVELEAK
                     KAAGYYTPAGALDPAALNAVKGRDLERY"
     gene            complement(2423..3556)
                     /locus_tag="VHN20_12945"
     CDS             complement(2423..3556)
                     /locus_tag="VHN20_12945"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HEX2726719.1"
                     /translation="MTMVRNEASEQAPGPRRIAELDGLRGGAAAAVVIAHYFGEVPSG
                     FRVLTVGWIGVGVFFVLSGYLIGSIVLRGWGEAGFLERFYLRRAARILPVYGVVVLAT
                     YLALTLLENASFVDAPLPLVTYLTFTQNFAIPILGPGSGWLLPTWTLAVEEQFYLVLP
                     LIVAVVPRRRLAEVLLLCCFLALAYRLLVRGINPMAALTPLPARADMLLAGVLAALAQ
                     HQLDLVRHVRVLRVASLVAAIVLLGFAIVSVEATLLVTPTLLGLGAACFILAIVNGAP
                     EGIRFRGARLGSLGAISYALYLVHQPVNGLLHGLMLGGRPDIATPAQIAVTLLAVAVS
                     FGLASLSLIILERPIRERVRRATATDETDRLTTTAAAASAQRP"
     gene            3734..>4617
                     /locus_tag="VHN20_12950"
     CDS             3734..>4617
                     /locus_tag="VHN20_12950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018643696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1688 family protein"
                     /protein_id="HEX2726720.1"
                     /translation="MEETVPLLEQQARQLLSAAAVRTRAEQLLQHGLDRRLDHFIVDL
                     DRLGSCADEVVTTIEAAYPSLEIPFHARWRHFAAGGFKRWVTIARAAPWPSAAEKARA
                     AFDLAIVSVLLDAGAGAAWRYVEGRTGETYARSEGLAIASFDMFIGGAFSSRPDDPFR
                     VDADALMTLDAEELARAFQVRVDNPLLGIEGRAALLNRLGQVVAADPDVFGRSDGPRP
                     GGLFDVLTGQAEQGRIPAPRILEALLNHLGAIWPGRVRLGGIDLGDTWRHPLVKTDDA
                     TDGLVPFHKLSQWLAYSL"
BASE COUNT          795 a         1539 c         1512 g          771 t
ORIGIN      
        1 agggaaacga atgtctatta tgcgcagcat aagggttgct tattgagggc gtcgtgacca
       61 ggaacatcga cacgtccctg atcagggctt tcgtggctgt cgcggaaacc ggtggcatga
      121 ccgccgccgc caatgtcctc aacctgaccc aggcggccgt cagccagcag atcaagcgtc
      181 tcgaggacgc cttccaggcg cagcttttcg aacgcgaccg gcgcggtctg cgcctcaccg
      241 ggcctggcga acggctgttc gccaaggcca agcgcttgct cgccgtcaac gacgagatct
      301 ggtccgacat gaccacgccc atctacacgg gcgaggtgcg cctcggcatc ccttacgaca
      361 tcgtcagcac ctacctgccg ccggttctga agagcttctc gcaagcctat ccgcagattt
      421 cgatttccct cgaatgccgt ccttccgtct acctcctcga agcgctggat gccggacatc
      481 tcgacgtggc catcacgacc gagctcggat gcggaccgca tggcgagagc ctggtcatgg
      541 atcgcctggt ctgggctggg gcgaggggcg gggccgctca ccggcaacgc ccgcttccgt
      601 tgacctgcgg caacgaaagc tgcgcctttc gcccgccgac attgcacgcc ctgatggcgg
      661 cgggcatcga ttggcggccg gtgtcggaaa tcaacaactt ggatgccctg aacgtgacgg
      721 tgcagaccga tctttcggtc ggcgcgctgc tcgcctccac ggttccggcg ggcctcgaaa
      781 ttctcggtgc cgaatcaggg ctgccgggcc tgccgctttt ctcgatcaac ctttacctgc
      841 cgaaagccgg tgcgacgccg gtcggggccg agttggcgcg gcacgtgcgc gagggattcc
      901 tgacgcggcc gcggcaggcg gcgtagatct cccggcgagt ggcgagcgat tctactcacg
      961 agtcgacagg cgtttgcttt agcgaacttg gccattgcgt cgcgaaatgc ttcgccactg
     1021 tggcaccgcg actgttgacg cctccgcgac tttgccgcag ctttgcggag ggtggcgaca
     1081 caaggctctc cggcgagcgc tttggggagc cttaatcatt caaggggcac gataagccca
     1141 tgaacagtcc gaaccgctcg acgcatatcc gtctcacttc gcatccggag cccggcaccg
     1201 ccgcaacgcg tttcccgatc cgttggggcg cggcgacggc gcgggagcgc gggccggtga
     1261 tcggctcggt caccaatccg gcggatcgca acgtcatcgg cgcgcatggc ggcgcctatt
     1321 cgctctatcg cgcgctcgcc atctcggccc gcgccctcaa tccgctggcg cggccggatc
     1381 ttcgcaacac gcatcccgtc gtcgacatcg ggccgcatcc gcagtggcat gagccaggca
     1441 ggatcgtgtc gctcgatccc tggggccaca agatcgggga cgtgttcggg gacgagatcg
     1501 cgggcggcac ggatatccgt ccttccatcg ccgtcaccag ggcgcgcctc aacatgcccg
     1561 agatcctcgc ggccatgacg gggcgacggc tcgccgccga tggcgagatt ctgcacgcct
     1621 ccggcgacgt ctcggtcacg aagatcgcga tcgacccggt atggcacctg cccggcgtag
     1681 ccgagcgctt cggcgtgagc gagcgcgacc tgcgccgcac gctgttcgag cagaccggcg
     1741 gcatgttccc ggagctcgtc acccgctccg acatgcaggt cttcctgccg ccgatcggcg
     1801 gcatcaccgt ctacatcgtc ggcgaggtcg cggcactcac caacccgaag cgcaccgtcg
     1861 cctgccgcgt gcatgacgaa tgcaacggct ccgacgtgtt cggctccgat atctgcacgt
     1921 gccgccccta tctcgttcac ggcatcgagg aatgcgtgaa ggaggcgcag aagggcggcg
     1981 ccggcgtcgt ggtctacaat cgcaaggagg gcagggccct cggcgaggtc accaagttcc
     2041 tggtctacaa cgcgcgtaag cgccaggagg gcggcgatca ggcggccacc tatttcgagc
     2101 gcaccgaatg cgtcgccggc gttcaggacg cgcgcttcca gcagctgatg ccggatgtgc
     2161 tgcattggct cggcatttgc cggatcgacc gtctgatgtc gatgtcgaac atgaaatacg
     2221 acgccatcgt cgcatccggc atcgaggtgg tcgagcgggt gccgatcccg gacgagctcg
     2281 tgccgccgga cgcgcaggtc gaactcgagg ccaagaaggc ggccggctat tatacgcccg
     2341 ccggcgctct cgacccggcc gccctcaacg ccgtcaaggg ccgcgatctc gagcgctatt
     2401 gaaccgccct tgccggatcc ctttacgggc gctgcgcgct tgcagcggcc gcggtggtcg
     2461 tcagccgatc cgtttcatcc gttgcggttg cgcggcggac gcgctcgcga atcggacgtt
     2521 ccagaataat caacgacagg ctcgccaggc cgaaggaaac agccacggcg aggagcgtca
     2581 ccgcgatctg agctggcgtc gcaatgtcgg ggcgcccgcc cagcataagg ccgtgcaaca
     2641 gcccgttgac tggctggtgc acgagataca gcgcgtatga gattgcaccg aggcttccca
     2701 gcctggcacc gcggaagcga ataccctcgg gcgcgccatt gacgatcgcg agaatgaagc
     2761 aggcggcacc aagcccgaga agcgtcggcg tgacgagaag cgtcgcctcg acggaaacga
     2821 tggcgaagcc cagaaggacg atggctgcca caagggacgc gacacgcaga actctcacat
     2881 ggcgcacgag atccagctgg tgctgcgcca gcgcagcaag cactccggcc agcaacatgt
     2941 cggcccgggc cgggagcgga gtcagcgctg ccatcggatt gatgccacgg accaggagcc
     3001 gatacgcgag tgcaagaaaa cagcacagga gcagaacctc ggcgagccgc ctgcgcggca
     3061 ccacggcgac gatcaggggg agaacaaggt agaactgctc ttcgactgcg agggtccatg
     3121 tcggcagcag ccacccgctc ccgggcccca agatcggtat ggcgaagttt tgcgtgaacg
     3181 tcaggtaggt tacgagcggc agcggcgcat cgacgaacga tgcattttcg agcagggtca
     3241 gcgcaagata ggtcgccaga acgacgacgc cgtagacggg caggatgcgg gccgcacgtc
     3301 gcaggtaaaa tcgctccaga aatccggctt cgccccatcc gcggaggacg atcgagccga
     3361 tgaggtagcc ggacagcacg aagaacacgc caacgccgat ccagccgacc gtcagcactc
     3421 gaaagccgct cggcacctcg ccgaagtaat gcgcaatcac gacggcggcg gcggcgccgc
     3481 ccctcagtcc gtccagctcg gcaatccggc gtggccctgg agcctgctcg gacgcctcat
     3541 tcctgaccat cgtcatcgct agcccttggt gcgagcaggt tacgagctag cagaaagtcg
     3601 ttaccttcgc gtgtcgccgt ttgccggtat gcgccgcaac ttgttcgggc gttggcgcgc
     3661 tcgcgtcggt tcggcttgtc cttcatgatt gcgtcaggca tgaacggtgc tggtcccgag
     3721 acccgcacca gtgatggaag agacggtccc tctcttggaa caacaggcgc ggcagcttct
     3781 gtccgccgcg gccgtgcgga cgcgcgctga gcaattgctg cagcacggcc tggaccgccg
     3841 cctcgatcac ttcattgttg atctcgaccg gctcgggtcc tgcgccgacg aggtcgtcac
     3901 cacgatcgag gccgcttatc cttctctcga gatcccgttc catgcccggt ggcggcattt
     3961 tgcagccggc gggttcaagc gctgggtgac gattgcccgg gccgcgcctt ggccgagtgc
     4021 ggcggagaag gcgcgcgccg cctttgacct ggcgatcgtc agcgtgctgc tcgatgccgg
     4081 agcgggcgcg gcctggcgct acgtcgaggg ccgcaccggc gagacgtatg cacgctcgga
     4141 ggggctcgcg attgcgagct tcgacatgtt catcggtggc gccttttcga gccgtcccga
     4201 tgacccgttc cgggtcgatg cggacgcgct gatgacgctc gacgcggagg aactggcccg
     4261 cgcctttcag gtgcgggttg acaatccgct gctcggcatc gagggccgcg ccgccctgtt
     4321 gaatcggctc gggcaagtgg tcgccgccga cccggacgta ttcggccgca gcgacggtcc
     4381 gcgtccgggc gggttgttcg acgttctgac cggacaggcg gagcagggcc gcattccagc
     4441 accgcgcatc ctcgaggcgc tcctcaacca tctcggcgcg atctggcctg gccgcgtccg
     4501 cctcggcggc atcgatctcg gcgacacgtg gcgccacccg ctcgtcaaga ccgacgacgc
     4561 gaccgacggg ctcgtgccgt tccacaagct gtcgcagtgg ctcgcctatt cgctgat
//
LOCUS       DATAIQ010000784         2013 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_410105, whole genome shotgun sequence.
ACCESSION   DATAIQ010000784 DATAIQ010000000
VERSION     DATAIQ010000784.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2013)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2013)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2013
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_410105"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(71..208)
                     /locus_tag="VHN20_12955"
     CDS             complement(71..208)
                     /locus_tag="VHN20_12955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726721.1"
                     /translation="MLMATMIQFVSFGAGLIVAGLGLIAAIFLASPPAREQDYERDRQ
                     A"
     gene            complement(480..1841)
                     /locus_tag="VHN20_12960"
     CDS             complement(480..1841)
                     /locus_tag="VHN20_12960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726722.1"
                     /translation="MSSSARRSLAVSGIIAMARIFHIEAASAQTSGFPPPRYVHFNGH
                     AQGALYMPDPAVHPNSTTAVLAIHRTENRMHNDGISPLIDRELPKRGFIVLGMNPHSA
                     NNEAAVKWEERMPRDIRAGVEFLKKEIGVKRVVLLGGSGGGPNVAFYQAIAEKGLSIC
                     KGGNKIVECPDDAALVGPPADAIVFRDTHPGNPMNRLRSANPAVTDEGNAGALDDSLN
                     PFLEQNGYNPRGCSSYSEEFQKRYFEAQSKRMNRLVDGALKTKAAMAAGKHFPADDAP
                     FVAHRGEARLVQLDRTIDAHTNSARKLVTDDGKIVTDVVRTVRPCSPENREADASYAN
                     SIDVTINSFLGAGAIRSTHAMTAIDHCTSNNSTTCMVQYIEAPTLVLTSQGHYFIRDN
                     EEIFERSASRAKDYAVIAGATHGMGNCARCEGAPYRNVRRNFYDYVAKWLDTDFAPVS
                     ELR"
BASE COUNT          344 a          614 c          652 g          403 t
ORIGIN      
        1 cgaaggctcg ttttgctggg cgacgcgggc ggcctttgcc ggacggttga gccctcgcga
       61 agagagacgc tcaggcttgg cgatcgcgct cgtaatcctg ctcgcgcgcc ggcggcgatg
      121 ccaggaagat cgccgcaatc agcccgagtc ctgcaacgat caggccggcg ccaaaactca
      181 caaattgaat catcgtcgcc atcagcaaac gttacgctca acattttaac atgggttaaa
      241 taacaaattc ggcgagcggc ccaccacagc gatatccgcc tgttcttcac gctgatcgct
      301 tcgacgcgct tatcaccggc tgttcaaatg caacctgcgg cgcctcgcgg gactacccta
      361 atctcagcgc ctatgtcgcg cgcgcgttgt gcggcccggc cgctggccgg accgcttcac
      421 gcccgcgatt gtgatcgctt cgatcggagc gatcacatcc gacttcgagt gcttcagctt
      481 taccgcaact cgctcacggg ggcgaagtcc gtgtcgagcc acttggccac gtagtcgtaa
      541 aagttcctgc gcacgttgcg atacggcgcg ccttcgcacc tggcgcagtt gcccatgccg
      601 tgcgtcgcgc cggcaatgac ggcatagtcc ttggcgcgcg acgcggagcg ctcgaatatc
      661 tcctcgttgt cgcggatgaa gtagtggccc tgcgaagtca gaaccagcgt cggcgcctcg
      721 atgtattgca ccatgcaggt cgtcgagttg ttgctcgtgc aatggtcgat ggcggtcatc
      781 gcgtgcgtcg accggatcgc gccggcgccc aggaaggagt tgatcgtcac gtcgatcgag
      841 ttcgcgtagg aggcatcggc ctcccggttc tcgggcgagc agggacgcac ggtgcggacg
      901 acatcggtga cgatcttccc gtcgtcggtg acgagcttgc gcgcgctgtt cgtgtgcgcg
      961 tcaattgtgc ggtcgagttg cacgagccgc gcctcgccac ggtgggcgac gaacggggcg
     1021 tcatcggccg ggaaatgctt ccccgccgcc atcgcggcct tcgtcttgag cgcgccgtcg
     1081 acgaggcggt tcatccgctt tgactgggcc tcgaaataac gtttctggaa ttcctcggaa
     1141 tatgacgagc agccgcgcgg gttataaccg ttctgctcga ggaacgggtt caggctgtcg
     1201 tcgagcgcgc cggcgttgcc ctcgtcggtg acggcgggat tggcgctgcg caggcggttc
     1261 atcggattgc cgggatgggt gtcgcggaag acgatggcat cggcgggcgg gccgaccagc
     1321 gccgcgtcat ccgggcactc gacgatcttg ttgccgcctt tgcagatgct caagcctttc
     1381 tcggcaatgg cttgatagaa cgcgacattc ggcccgccgc cgctgccgcc caggaggacg
     1441 acgcgcttga cgccgatttc cttcttcagg aactcgacgc cggccctgat gtcgcgcggc
     1501 atgcgctcct cccacttcac cgccgcttca ttgttggccg agtgcggatt catcccgagc
     1561 acgatgaagc cgcgcttcgg caattcgcgg tcgatcagag gactgatgcc gtcgttgtgc
     1621 atgcggtttt ccgtgcggtg gatcgcaagc acggcggtgg tcgagttggg atgaacggca
     1681 ggatcgggca tatacagcgc gccctgggca tggccgttga aatggacgta gcgcggcggc
     1741 ggaaagccgg acgtctgtgc cgatgccgct tcgatgtgaa agatcctggc cattgcgatg
     1801 atgccggata cggcaagcga ccggcgggcg ctgctggaca tgcatacctc cccttctgtc
     1861 atggaatttt ccggcgaaac gggtccggtc cgccggagaa aaggcaaagt ggcagccact
     1921 ttgccggatc gtgctctgga aaagctacag cccatcccgc ccgagtggaa cggggtctag
     1981 gtcatgaact cataaacggg gtttcggttt tag
//
LOCUS       DATAIQ010000785         4220 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_340968, whole genome shotgun sequence.
ACCESSION   DATAIQ010000785 DATAIQ010000000
VERSION     DATAIQ010000785.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4220)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4220)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4220
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_340968"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            357..1856
                     /locus_tag="VHN20_12965"
     CDS             357..1856
                     /locus_tag="VHN20_12965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018266402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF87 domain-containing protein"
                     /protein_id="HEX2726723.1"
                     /translation="MTLAIDIGTTSAGTPATLDLEELLATRLLVQGNSGSGKSHLLRR
                     LLEQSAPWVQQAVIDPEGDFVTLSERFGHVVVDADRSESEIQRIARRVRQHRVSVVLN
                     LENLDAEAQMRAAAVFLNALFDADREQWFPMLVVVDEAQLFAPTASGETAEEVRRLSL
                     GAMTNLMCRGRKRGLAGVIATQRLAKLAKNVAAEASNFLMGRTFLDIDMARAADLLGL
                     ERRQAEMFRDLQRGQFVALGPAVSKRPLSVRIGPVETSGRSASPVLLPLPAETPDAGE
                     LLFAPAGDDERESRPAITRRPIRPSVDDVLVQLSDFRPAPPPALPGTEAAPTDGVPAE
                     PPPPIETVLGEMLSEPEAAMRTTAVLYQDFTTRMRRFGGTAPSLAEFSRSLAIARAEA
                     GQAVQETPEWQKALACTADLAEDLHGVFLAIARAAIEGAPCPSDDDLAAIYGTTSPGR
                     ARRLLLYLEERGLILSRIDFRKRRSIALPPLGVETAPGLPLTASAAGGR"
     gene            1949..3247
                     /locus_tag="VHN20_12970"
     CDS             1949..3247
                     /locus_tag="VHN20_12970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726724.1"
                     /translation="MRKLLRACAVGMGMVVMAGAAAAQSNPRYIQFSPSPTKGALYVP
                     DAGPAPRIAFLVVHRTSNFMNLIANRELARRGFMALGMNPRSDNNEAAVNFEEIALDI
                     KQGIEFLKKQAGIERVVLIGHSGGGPSTSFYQAVAEKGPSYCQGPSKLTQCGKDLAGL
                     PAADALVLLDAHPGNTVNALRSLNPAVSDESRPNELDPALNPWDPKNGFNPNGDSTYS
                     QDFQDRYFKAQAARMNRLIDKAVKIRADIAQGKHTTSDDDVFAAYRDRARLSDVSTGV
                     HCCTTRPQKLLKDDGTISTEVIRTVRVSTPSNARRDGTLDGSLFLTVNSFLSANAIRA
                     THSLDGIDWCSSNNSTPCAVESITVPTLVAAMGAHYFITDGEFIFDRSASKDKDFIVV
                     EGAVHGMTPCKPCSAATGRSYENATKNLYDYIAKWTSARL"
     gene            complement(3290..>4220)
                     /locus_tag="VHN20_12975"
     CDS             complement(3290..>4220)
                     /locus_tag="VHN20_12975"
                     /inference="COORDINATES: protein motif:HMM:NF013696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEX2726725.1"
                     /translation="ESGSPSLPAWVDENLELIRADGALSFDGGFDASDKPRIQLGSSG
                     LLFVEIRARGAEGDLHSARARIVENPAWRLVWALNKLKGEDGRINLPGFYDRIRPVSD
                     SDRAALAKVGWDDEKQYRDLGIRRFLGGVTGLKAFEQLLFTPTCNIAGFGTGYMGPGK
                     KTVLPSRAAVRLDFRLVADMDPVEILDKLRTFLDENGCGDFEIECKGSVEPSRTSIDN
                     PFAAMVVDAAKRVYGVEPGLRPTGDASGRQGVWLGGKLGGVPAATSSVGPPAWNGHAP
                     NEFMKIDYYLRGIKYAATIWSNFGEGFRRNGAR"
BASE COUNT          705 a         1485 c         1386 g          644 t
ORIGIN      
        1 atgatggcgc cgccgcccgc cagggccgcc gcaccggccg cgctcacgaa ggcgcccttc
       61 aggaatcccc gccgctcgct gtcgagctcg tcgagcagct tctgacggtg aagctcgaag
      121 tcagggcatt cgtggtcatc gcctgcgcac atggaaccct ccctggccga gtggctgtcc
      181 cggcggacgc aagtctgctc cgatgcaaac cggctgccaa ctcggctgca gggcgatgcc
      241 ggttcccggc gttaaccgcg gttggcgcgc agcctgtgga cggggctcgc catgacgatc
      301 ttttgccgcc tgtgccgtgc tagacggctt tcccctgtcc gtccgcgagg aggcgaatga
      361 cgctcgctat cgatatcggt acgacctcgg ccggaacgcc cgcgaccctc gacctcgagg
      421 agttgctcgc gacgcgcctt ctcgtgcagg gaaattccgg gtcgggaaag tcgcatctgc
      481 tgcgccggct gctcgagcag agcgcgccat gggtccagca ggccgtcatc gatccggagg
      541 gcgacttcgt tacgctgtcc gaacggttcg ggcacgtggt cgtcgatgcc gaccgctcgg
      601 aaagcgagat ccagcgcatc gcgcgccgcg ttcgccagca ccgcgtgtcg gtggtgctca
      661 acctggagaa cctcgacgcc gaggcccaga tgcgcgcagc ggccgtcttc ctgaacgcct
      721 tgttcgacgc cgatcgagag caatggttcc ccatgcttgt cgtggtcgac gaggcgcagc
      781 tgttcgcgcc gaccgcgagc ggcgagaccg ccgaggaagt ccgccggctg tcgctcgggg
      841 cgatgaccaa cctgatgtgc cgcggccgca agcgcgggct tgccggcgtg atcgccacgc
      901 aacgcctcgc caagctcgcc aagaacgtcg ccgcggaagc ctctaatttc ctgatggggc
      961 gcacgttcct cgacatcgac atggcgcgcg ccgccgatct cctcggcctg gagcggcgcc
     1021 aggcggagat gttccgcgac ctgcagcgcg gccagttcgt ggcgctcggg ccggccgtct
     1081 cgaagcggcc gctatcggtg cggatcgggc cggtcgagac atcgggccgc agcgccagcc
     1141 ccgtgctctt gccgctgccc gccgagacgc ccgacgccgg cgagttgctg ttcgcccccg
     1201 ccggtgatga cgagagggag agcaggcctg caatcacgcg gcggccgata cgcccgtcgg
     1261 tcgacgacgt gctcgtccag ctctcagact tccgtcctgc cccgccgccc gcgctgccag
     1321 gaaccgaggc cgccccgacc gacggcgttc cggcggagcc gccgccgccg atcgagacgg
     1381 tgcttggcga gatgctgagc gagccggaag ccgcgatgcg cacgacggcg gtgctctacc
     1441 aggattttac gacgcgcatg cgccgcttcg gcggcacggc gccgtcactg gcggagttca
     1501 gccggtcact ggccatcgca cgggcggagg ccggccaggc ggtccaggaa acgccggaat
     1561 ggcagaaggc cctcgcctgc acggccgatc tggccgagga tctgcacggc gtgttcctgg
     1621 cgatcgcccg ggctgccatc gagggcgccc cgtgcccctc cgacgacgac ctcgccgcca
     1681 tctatggcac cacctcgccc ggccgggccc ggcgcctgct cctctacctc gaggagcgcg
     1741 ggctgatcct gagccggatc gacttccgca agcgcagaag catcgccctt ccgcccctcg
     1801 gggtcgagac ggcgcccggc cttccgctta ccgcgtcggc tgccggcggg cgatagctcg
     1861 atcgtgactg acgggccgtg aagcggcgtc ttcaatcccg gcaaggccct cgctacaaag
     1921 cggcacgcat cgagcacggg agggtccaat gagaaagctg ctgcgcgcct gcgcggtcgg
     1981 aatgggaatg gtcgtgatgg cgggcgccgc cgccgcccag agcaacccgc gctacatcca
     2041 gttctcgccc tccccgacca aaggcgcgct ctacgttccg gacgctggac ccgcgccgcg
     2101 catcgccttc ctcgtcgtgc accgcacgtc caacttcatg aacctgatcg ccaaccggga
     2161 gcttgcgcgg cgcggcttca tggcgctggg catgaacccg cgttccgaca acaacgaagc
     2221 ggcggtgaat tttgaggaga tcgccctcga catcaagcag ggcatcgaat tcctgaagaa
     2281 gcaggcaggc atcgagaggg tcgtgctgat cggccattcg ggcggagggc cgtcgacgtc
     2341 cttctaccag gccgtcgccg agaagggccc gtcctactgc cagggaccga gcaagctgac
     2401 ccagtgcggc aaggaccttg ccggtctccc cgccgccgac gccctcgtgt tgctcgacgc
     2461 ccatcccggc aacacggtga atgcgctgcg cagcctgaac cctgccgtga gcgacgaaag
     2521 caggcccaac gagctcgacc cggcgctcaa tccatgggac ccgaagaacg gcttcaaccc
     2581 gaatggcgac tcgacctatt cccaggactt ccaggaccgc tacttcaagg cgcaggctgc
     2641 gcgcatgaac cggctgatcg acaaggccgt aaaaatccgc gcggacatcg cacaagggaa
     2701 gcacacgacc tcggatgacg acgtcttcgc ggcctatcgc gaccgcgcgc gcctgtccga
     2761 tgtctccacg ggcgtgcatt gctgcaccac gcgcccacaa aaactgctca aggacgacgg
     2821 caccatcagc accgaggtga tcaggaccgt gcgcgtctcg acgcccagca acgccaggcg
     2881 agacggcacg ctcgacggca gcctcttcct gacggtgaac tcgttcctga gcgccaacgc
     2941 catccgggcg acgcattcgc tcgacggcat cgactggtgc tcgagcaaca actcgacgcc
     3001 gtgcgcggtc gagtccatca cggtcccgac gctcgtcgcc gcgatgggag cgcactattt
     3061 catcacggac ggcgagttca tcttcgatcg gtccgccagc aaggacaagg atttcatagt
     3121 cgttgaaggc gccgtgcacg gcatgacgcc atgcaagccg tgctcggcgg caaccggccg
     3181 atcctatgag aacgcgacga agaacctcta cgactacatc gccaagtgga cgagcgcgcg
     3241 cctgtgacgc gcagcatccc ggatcgacgg gcgtcagacg acgcgcgcgt cagcgcgcgc
     3301 cgttgcggcg aaagccctca ccgaagttcg accagatggt cgcggcgtat ttgatgccgc
     3361 gcaggtaata gtcgatcttc atgaactcgt tgggggcatg gccattccag gcaggcgggc
     3421 ccaccgacga agtggcagcc ggcacgccgc cgagcttgcc gccgagccac acgccctgcc
     3481 ggcccgaggc atcgccggtg ggccgcaggc cgggctcgac gccgtagacg cgcttggcgg
     3541 catccaccac catcgccgcg aacggattgt cgatcgaggt gcgcgacggc tcgaccgagc
     3601 ccttgcactc gatctcgaaa tcgccgcagc cattctcgtc gaggaaggtt cgcagcttgt
     3661 ccaggatctc gaccggatcc atgtcggcga ccaggcgaaa atcgagacgc acggcggcgc
     3721 ggctcggcag caccgtcttc ttgccgggtc ccatgtagcc ggtgccgaag ccggcgatgt
     3781 tgcaggttgg cgtgaacagg agctgctcga aggccttgag gccggtcacg ccgccgagga
     3841 agcggcggat gccgagatcc ctgtactgct tctcgtcgtc ccatccgacc ttggcgagag
     3901 cggcgcggtc ggagtcgctg acgggccgga tgcggtcgta gaaacccggc agattgatgc
     3961 gcccgtcctc gcccttcagc ttgttgagcg cccagacgag gcgccaggcc gggttctcga
     4021 cgatgcgcgc ccgcgccgaa tgcaggtcgc cctccgcgcc cctggcgcgg atctcgacga
     4081 acagaaggcc gctcgatccg agctggatgc gcggcttgtc gctcgcatcg aagccgccgt
     4141 cgaacgatag cgcgccgtcg gcgcggatga gctcgagatt ctcgtccacc caggccggca
     4201 ggctagggct gccgctctcc
//
LOCUS       DATAIQ010000786         3373 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_317801, whole genome shotgun sequence.
ACCESSION   DATAIQ010000786 DATAIQ010000000
VERSION     DATAIQ010000786.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3373)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3373)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3373
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_317801"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            366..698
                     /locus_tag="VHN20_12980"
     CDS             366..698
                     /locus_tag="VHN20_12980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726726.1"
                     /translation="MAYLMLLYDRPTDVKNWAAYNDRVKGWIARLLALPGAVSLMAYR
                     TVDGASPNIIGMLEFRSMDDARTAATSTQTRTILDELRAVGAYATVLTLERSPYTPTP
                     LRSQASPP"
     gene            934..2730
                     /locus_tag="VHN20_12985"
     CDS             934..2730
                     /locus_tag="VHN20_12985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015684121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX2726727.1"
                     /translation="MPATDIGNPDYFHKVVDCQWACPAHTPVPEYIRLIAAGRYTDAY
                     MVNWVSNVFPGILGRTCDRPCEPACRRGRVEEDPVAICRLKRVAADNKSDVRHLLPTA
                     PAGGNGKRIALIGAGPASLTVARDLAPLGYAITLFDSENRGGGMIRSQIPRFRLPETV
                     IDEEVGYIVGIGGIETRFGTRIDSLGALLAQNFDAVFVGTGAPRGRDLDIPGRQEAAA
                     NIHIGIDWLANVSFGHVDRIGRRVVVLGGGNTAMDCCRTARRLGGDEVTVVVRSGFEE
                     MKASPWEKEDAMKEGIPILNYRVPKAFVHESGRLTGVLFETVAPSRDAEGRRQLLPTG
                     EPDELIACDDVLVAIGQENAFPWIERDLGIEFDRWGLPKVDTATMQSTLPNVFFGGDS
                     AFGPKNIIWAVAHGHEAAISIDRFCRGESVRERPPPHVNLSSQKMGIHEWSYDNDVSL
                     EARQVVPHENQSISLKDVKVEVELGFDRALAYAETQRCLNCDVQTVFTTSLCIECDAC
                     MDICPMDCITFTANGPEDDLRARLKAPAPNTEQALYVSSQLGTARVMVKDEDVCLHCG
                     LCAERCPTGAWDMQKFLLNVAHASGRKACARA"
     gene            2805..>3373
                     /locus_tag="VHN20_12990"
     CDS             2805..>3373
                     /locus_tag="VHN20_12990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018641081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase family
                     protein"
                     /protein_id="HEX2726728.1"
                     /translation="MVATNDFVVQFANVNGSGSASANRLFARSIIRMGVPVASRNIFP
                     SNIQGLPTWYEVRVSGEGHRGRRGGVDLMVAMNPQTWDKDVGVIEPGGYLFYDSTRPM
                     PPSKFRDDINVVGMPLTQLTNARYKDPRQRQLFKNVIYVGALGQLLGIETEVLQALIA
                     EQFKGKDKLIPPNYEALEIGRDYAARHLP"
BASE COUNT          599 a         1140 c         1111 g          523 t
ORIGIN      
        1 ggcgagaggg tgttagaggc ggtgacacag ccggagagaa ggccggaaag aaaaatcgtg
       61 aaaccgagcg ccagaaaagg ccgagagatc atgtgcgtgc ccccgtagat caagggcgga
      121 cactcattat tgccggctac cgcaatcgtc gcgattctac tttacgtaga attgttgcaa
      181 aaaagcagga gtacgagggc acgtcgcgca ggcgcgggaa gacgcccggc cctgcgtgag
      241 caggtgcagg tttgcgaggc gaaaacgtct tttccgaaaa cgcggtcgcg gtaaggtatt
      301 ctcgagttcc cgggaccatg cccggcaggc attcccacca atccaggcgg ttcgggagga
      361 gcgccatggc ttatctgatg cttctgtatg accggccgac cgacgtcaaa aactgggcgg
      421 cctataatga ccgcgtcaaa ggctggatcg cgcgtctcct ggcgctgccc ggcgccgtct
      481 ctctgatggc ctaccgcacg gtcgacgggg caagcccgaa tatcatcggc atgctggaat
      541 tccgcagcat ggacgacgcc cggaccgcgg ccacctcgac acagaccagg accatcctgg
      601 acgagctgcg cgcggtcggg gcctacgcca cggttctgac cctcgagcgc tcgccctaca
      661 cgccgacgcc gctccgctcg caagcctcgc ctccatgagg cgcggccgct gacgccgccg
      721 ggcgacggcc gccgcgcctg ccccttcacc gccggttcag agcgcctgtg acaaacccgc
      781 ttaaacagaa gatggcgctt tgctttccct gcccgctgct tcaggatggc gcccggaaac
      841 gccaagacgc ccggagaggc gcaatcaatg ctaattgacg aaggcgcgcg ccagggcgtg
      901 agttcggcgg gcgcgaccga gaccggcggt gctctgccgg ccaccgacat cggcaatccg
      961 gactacttcc acaaggtcgt cgactgccag tgggcctgcc cggcccatac ccccgtcccg
     1021 gaatacatcc ggctgatcgc ggctgggcgc tacaccgacg cctacatggt caactgggtc
     1081 tccaacgtct ttcccggaat cctcgggcgg acgtgcgaca ggccttgcga gccggcgtgc
     1141 cgccgcggcc gtgtcgagga agacccggtt gcgatctgcc gcctgaagcg tgtcgccgcc
     1201 gacaacaaga gcgatgtgcg ccacctgctg ccgacggccc cggccggcgg caacggcaag
     1261 cgcatcgcgc tgatcggcgc cggccccgcc tcgctgaccg tggcgcgcga cctcgcgccg
     1321 ctcggctacg cgatcaccct gttcgattcg gagaaccgcg gcggcggcat gatccgcagc
     1381 cagatcccgc gcttccgcct gccggaaacg gtgatcgacg aggaggtcgg ctacatcgtc
     1441 ggtatcggcg gaatcgagac ccgcttcggc acccgcatcg acagcctcgg cgcgctgctc
     1501 gcgcagaact tcgatgcggt cttcgtcggc accggcgcgc cgcgcggccg cgatctcgac
     1561 atccccgggc ggcaggaggc cgccgccaac atccatatcg gcatcgactg gctcgccaac
     1621 gtgtcgttcg gccatgtcga ccgcatcggc cgccgcgtcg tcgtgctcgg cggcggcaac
     1681 accgccatgg attgctgccg cacggcccgc cgccttggcg gagacgaggt cacggtcgtc
     1741 gtgcgctcgg gcttcgagga gatgaaggcc tcgccgtggg agaaggagga tgccatgaag
     1801 gagggcatcc cgattctcaa ttaccgcgtg cccaaggcgt tcgtgcacga gagcggccgg
     1861 ctgaccggcg tgctgttcga gacggtggcg ccgtcgcgcg acgccgaagg ccggcgacag
     1921 ctgctgccga ctggcgagcc cgacgagttg atcgcctgcg acgacgtcct cgtcgccatc
     1981 ggccaggaaa acgcgttccc gtggatcgaa cgcgacctcg gcatcgagtt cgaccgctgg
     2041 ggtctgccga aggtggatac ggcgaccatg cagtcgaccc tgcccaacgt cttcttcggc
     2101 ggcgattcgg cgtttggtcc caagaacatc atctgggcgg tcgcccatgg tcacgaggcg
     2161 gccatctcga tcgacaggtt ctgccgcggc gagtcggtgc gtgagcggcc gccgccgcac
     2221 gtcaacctgt cgagccagaa gatgggcatt cacgagtgga gctacgacaa cgacgtctcg
     2281 ctggaggccc gtcaggtcgt cccgcacgag aaccagtcga tctcgctcaa ggacgtcaag
     2341 gtcgaggtcg agctcggctt cgaccgggcg ctcgcttatg ccgagacgca gcgctgcctc
     2401 aactgcgacg tccagacggt gttcacgacc agcctttgca tcgaatgcga tgcctgcatg
     2461 gacatctgcc cgatggactg catcacgttc acggcgaacg ggcccgagga cgatctgcgc
     2521 gctcggctca aggcgccggc gccgaacacc gagcaggcgc tctacgtgtc gagccagctc
     2581 gggacggcgc gggtcatggt caaggacgag gacgtctgcc tgcattgcgg cctgtgcgcc
     2641 gagcgctgcc cgacgggcgc ctgggacatg cagaagttcc tgctcaacgt ggcccacgca
     2701 tcggggagga aagcttgcgc gagagcctga gcgagccggc cgactcaccc cggccggaat
     2761 ccggacggga gcgcgtccag cccaagagca gcggcggctg gcgcatcgtc gccacgaacg
     2821 atttcgtggt gcagttcgcc aacgtgaacg ggtccggctc ggcgagcgcc aaccggttgt
     2881 ttgcgcgctc gatcatccgc atgggcgttc cagtcgcctc gcgcaacatc ttcccgtcga
     2941 acatccaggg cctgccgacc tggtacgagg tgcgcgtgtc cggcgagggt catcgcgggc
     3001 gccgcggcgg cgtcgacctc atggtggcga tgaacccgca gacgtgggac aaggacgttg
     3061 gcgtgatcga gcccggcggc tatctgttct acgactcgac gcggcccatg ccgccctcga
     3121 aattccgcga cgatatcaac gtcgtcggca tgccgctgac ccagctgacc aacgcgcgct
     3181 acaaagaccc gcgccagcgc cagctgttca agaacgtgat ctatgtgggc gccctcggcc
     3241 agctcctcgg catcgagacc gaggtgcttc aggcgctgat cgccgagcag ttcaaaggca
     3301 aggacaagct gatccccccg aactacgagg cgctcgagat cggccgcgac tatgccgcgc
     3361 ggcacctgcc cga
//
LOCUS       DATAIQ010000787         1661 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_317864, whole genome shotgun sequence.
ACCESSION   DATAIQ010000787 DATAIQ010000000
VERSION     DATAIQ010000787.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1661)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1661)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1661
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_317864"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..247)
                     /locus_tag="VHN20_12995"
     CDS             complement(<1..247)
                     /locus_tag="VHN20_12995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726729.1"
                     /translation="MRDDIAVQWSAFTMRQSIRGARHAFVSTFSGESTMMRTTLVTLV
                     IAGSIGGSLGLQPSATQAADAGATTRRQLDCWIGAKFG"
     gene            complement(300..>1661)
                     /locus_tag="VHN20_13000"
     CDS             complement(300..>1661)
                     /locus_tag="VHN20_13000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007532566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M20 family metallopeptidase"
                     /protein_id="HEX2726730.1"
                     /translation="ARAQAYFDTGAFRNDLARRVAMPTESQNPERASVLDGYIADEMV
                     PALERLGFTCRRLQEGRWPFLLAERLEDPARPTVLGYGHGDVIRGLEDGWSDGLSPWS
                     LTERGDRWYGRGVADNKGQHSINIGALESVLATRGSLGFNAKYLIEMGEEMGSPGLRE
                     LCARQKELLRADVLIASDGPRLTAARPTVFLGARGGVTFDMWIEAREGGHHSGNWGGL
                     LSDPAIQLAHAIASVVGPTGQIRVPEWVPDEIPAAVRRVLADCAVESGPEGPAIDPSW
                     GEPGLTPAEKVFGWCSFTVLAYEAGNPKTPVNAIPPRAWARCQLRFVVGIDWQNVLPA
                     LRRHLDRHGFPMVQIAKSRDEVFHATRLDPEHPWVTWAVASIAATTGKKPAILPNLGG
                     SLPNDIFSEVLGLPTVWVPHSYPACSQHAPDEHLPVAIAREGLALMAGLYWDLGGPGV
                     PSA"
BASE COUNT          280 a          571 c          561 g          249 t
ORIGIN      
        1 cgccgaactt cgcgccgatc cagcaatcga gctgccgccg cgtggtcgcg ccggcgtccg
       61 ccgcctgcgt cgcggatggc tggagaccga ggctgccgcc gatggaaccg gcaatcacga
      121 gcgttacgag agtggtccgc atcatcgtgc tctctcccga aaaagtcgac acgaaggcat
      181 gtcgagcgcc gcgaatagac tggcgcatcg taaaggcgga ccattgcacg gcgatgtcgt
      241 cgcgcatgtc gtgcgcgaaa caaggcgcag cacaccacag tcggcgcgcc ctgcagccgt
      301 cacgcgctcg gcacgcccgg cccacccaaa tcccagtaca gtccggccat aagggcaagt
      361 ccctcgcgcg cgatggcgac cggcagatgc tcgtcgggcg catgttgcga gcaggccgga
      421 taggaatgcg gcacccagac agtcggcagg ccgagtacct ctgagaagat gtcgttcggc
      481 agcgatcccc cgaggttggg caggatcgcc ggcttcttgc ccgtggtcgc cgcgatcgag
      541 gcgacggccc acgtcaccca cggatgctcc ggatcgaggc gtgtcgcatg aaacacctcg
      601 tcgcgcgatt tagcgatctg caccatcggg aacccgtgcc ggtcgagatg gcggcgcagc
      661 gccggcagca cgttctgcca gtcgatgccg accacgaaac gcagctggca gcgcgcccag
      721 gcgcgcggcg gaatcgcgtt gacgggcgtc ttcggattgc cggcctcgta agccagcacc
      781 gtgaaggagc accagccaaa caccttttcg gcaggtgtca gtcccggctc gccccatgag
      841 gggtcgatgg cgggcccctc ggggccgctc tcgacagcgc agtccgcgag gacgcgccgc
      901 accgccgccg gaatctcgtc cggcacccat tcgggaacgc ggatctgccc agtcggcccc
      961 accacgctgg caatggcatg ggccagctgg atggcgggat cggacagaag cccgccccag
     1021 ttcccggaat ggtgtccgcc ttcgcgcgcc tcgatccaca tgtcgaaggt gacgccgccg
     1081 cgggccccga ggaagacagt cggccgggcg gcggtgaggc gcgggccgtc ggacgcgatc
     1141 agtacgtcgg cgcgcaatag ttccttctgt cgcgcacaca gctcgcgcag gccgggcgag
     1201 cccatctcct ctcccatctc gatcagatac ttggcgttga atccgaggct gccgcgggtg
     1261 gcgagcacgg attcgagggc gccaatgttg attgagtgct gccccttgtt gtcggccacc
     1321 ccgcgtccgt accagcggtc gccgcgttcg gtgagcgacc acggagacag cccatcgctc
     1381 cagccgtctt cgagaccgcg gatgacgtcg ccgtggccgt agccgagcac cgtcggacgc
     1441 gccggatcct caaggcgttc cgcgagcagg aaaggccacc gcccctcctg cagcctccgg
     1501 caggtgaagc cgagccgctc gagagcgggc accatttcgt cggcgatgta gccgtctagg
     1561 acggacgcgc gctcggggtt ctggctttcc gtcggcatcg ccacgcggcg ggcgaggtcg
     1621 ttccggaatg ctccggtatc gaaataagct tgggcgcggg c
//
LOCUS       DATAIQ010000788         2000 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_133600, whole genome shotgun sequence.
ACCESSION   DATAIQ010000788 DATAIQ010000000
VERSION     DATAIQ010000788.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2000)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2000)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2000
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_133600"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1182)
                     /locus_tag="VHN20_13005"
     CDS             complement(<1..1182)
                     /locus_tag="VHN20_13005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726731.1"
                     /translation="MKPTRRGLLAGATLLPLTLMGQVRGAAGDGSTAPDLRLRSIRQE
                     HPRIIATPEALARMDAALKTNLVARNWRSLFEQRMREAFFHDKGLPPLAYTDKTKDVF
                     FRADPAPAAPAGRVEDLGTPSEFLDLSNEFEVPTPVDEPDTSQVFKYSFNVKADGALD
                     YARVALTRMHALGLLALMKPEPEYVERAKLELLAICRLRGWGTKILAAATFAHAAAIG
                     YDWLHASLSESERAFVEKTILDRGITRGLAEFDAYPQPAWLTSRAILNWNVVCNAAMM
                     VTALSLFERDRAACTRLFNLSYHAILRGLANYAPDGSWKHEGPNYWHLATEHAVYMLD
                     ALDTALGTDLFLSDVPGLRETGTFRLHVEGPSKRLFNYGDSASSRRELWWMLWLARRY
                     GR"
     gene            complement(1600..>2000)
                     /locus_tag="VHN20_13010"
     CDS             complement(1600..>2000)
                     /locus_tag="VHN20_13010"
                     /inference="COORDINATES: protein motif:HMM:NF020137.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005615 - extracellular space [Evidence
                     IEA];
                     GO_function: GO:0005509 - calcium ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="M10 family metallopeptidase C-terminal
                     domain-containing protein"
                     /protein_id="HEX2726732.1"
                     /translation="GNDQLEGGAGNDRMTGGAGNDVLIGGLGRDVMVGSEGADRFDFN
                     SLADSRIGAARDVAYFDTGDTIDLSTIDADADSAGNQAFAFIGTRAFSGTEGDLRFSR
                     GVLQADTNGDRVADLEVRIVGTLTSNDLVL"
BASE COUNT          334 a          633 c          678 g          355 t
ORIGIN      
        1 cctgccgtag cgtctcgcga gccacagcat ccaccagagt tcccggcgcg agctggcact
       61 gtcgccataa ttgaagagcc tcttcgaagg tccttcgaca tgcagccgga acgtgccggt
      121 ctcgcgcaag ccgggcacgt cgctgaggaa cagatcggtg ccgagagcgg tgtccagcgc
      181 gtcgagcatg tagaccgcgt gctcggtcgc cagatgccag tagttcggcc cttcgtgctt
      241 ccaggacccg tccggcgcgt agttggcgag cccgcgcagg atcgcgtggt agctcaggtt
      301 gaacagccgc gtgcaagctg cccggtctct ctcgaacagc gaaagggccg tcaccatcat
      361 cgcagcgttg cagacgacgt tccagttcag gatggctcgc gaggtcagcc aggcgggctg
      421 cggataggcg tcgaactcgg cgaggcctct cgtgatgccg cggtcgagga tggttttctc
      481 gacaaaagcc cgctcgcttt cgctcaggct cgcatgcaac caatcgtagc cgatcgcggc
      541 cgcatgggcg aaggtcgcag cggcgaggat tttcgttccc cagccccgca ggcggcaaat
      601 ggccagcagc tcgagcttcg cacgctcgac gtattcgggc tcaggtttca tgagagccaa
      661 gaggccgagc gcgtgcattc gggtgagggc gacccgggcg taatccagcg caccgtcggc
      721 tttgacattg aacgagtatt tgaagacttg cgacgtgtcc ggctcgtcga cgggcgtcgg
      781 cacctcgaac tcgttcgaga gatccaggaa ttccgatggc gttccaagat cctcgacgcg
      841 accggccggg gcggccggtg cagggtcggc gcggaaaaac acgtccttgg tcttgtccgt
      901 ataggcgagc ggaggaagcc ccttgtcgtg gaagaacgcc tcgcgcatgc gctgctcgaa
      961 cagactgcgc cagttcctgg cgacaaggtt tgtcttcaag gcggcgtcca tgcgcgcgag
     1021 cgcctcgggc gtcgcgatga tgcgcggatg ttcctgccga atgctgcgca gacgaaggtc
     1081 cggggccgtg ctgccgtcgc cggccgcgcc gcggacctgc cccatcagcg tcaacggaag
     1141 caatgtggcg cccgcaagaa ggccccgccg tgttggtttc atcgtgctct cccgcttgcg
     1201 acagtggttc tcgtgggcga ttcgacgagg acggcgcgcg accgcgtttc cgattcagcc
     1261 acgctcaggg ggataaaatc ggcgtctcgg cgattgaggc aaatggcagc agcgcaggca
     1321 gccaggcaat cagcttggtc ggcgccttca ccggagcggc gggtcagctg cgcgctttcc
     1381 gcagcggcgg cgctactttc gttgaggcgg acgtcaatgg ggaccgcgtc gccgacctgt
     1441 ccatcgtgct cacgggatcg cacagtctgg ccaacggcga cttcattttg gatggggcgc
     1501 ggcggcaacg cttgggacac gtacgctcgc gacgagcggg atcggttcgg attgaacgca
     1561 gaaggccgga cgtcgaattg gttcatcctc tgatccggcc tacaggacga gatcgttcga
     1621 ggtcagggtc ccgacgatcc tgacctcgag atcggcgacg cggtcgccgt tggtgtcggc
     1681 ctgcagcacg ccgcggctga accgcagatc cccctccgtc ccgctgaagg cgcgcgtgcc
     1741 gatgaaggcg aaggcctggt tgccggccga gtccgcgtcc gcgtcgatgg tcgagaggtc
     1801 gatcgtgtcg ccggtgtcga aataggcgac gtcgcgggcc gcgccgatcc tgctatcggc
     1861 gagcgagttg aagtcgaagc gatcggcgcc ctcgctaccc accatcacgt cgcggccaag
     1921 gcctccgatc agcacgtcat tgccggcccc gccggtcatg cgatcgttgc cggcgccgcc
     1981 ctcgagctgg tcgttgccat
//
LOCUS       DATAIQ010000789         1898 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_410321, whole genome shotgun sequence.
ACCESSION   DATAIQ010000789 DATAIQ010000000
VERSION     DATAIQ010000789.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1898)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1898)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1898
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_410321"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(303..>1898)
                     /locus_tag="VHN20_13015"
     CDS             complement(303..>1898)
                     /locus_tag="VHN20_13015"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX2726733.1"
                     /translation="LQSVRTIHGLMRVVQGDALPGVRWATALKTGAGDVRTAVFQHIL
                     ATDEDGLGAAEKRYAAAIASVEVARHGREQVLATAAERAHYDRFSQDWDQYVAALQEI
                     QTLSRQYAKEAAGLFYTEKAAPLIEAAMKAVDEIVAVKNSGADAASERANAAAASTLN
                     LVAIIIALAFLGSVAAAWAITRSIARGIASVVAPMRALAAGDLSASVPASDERTEIGT
                     IAGVLQVFKQALIDKARADETSASEAQGKVRRAQKLQEIGARFESSVDALTHALSNSA
                     LGMETTAASLSETAAETAMQAVTAASSAEQTAMNVQTVASATEELAASVREITRQVMD
                     SSATATKTAENVQRTDGIIQSLAASAQKIGDVVALISGVASQTNLLALNATIEAARAG
                     EAGRGFAVVAAEVKALANQTSTATSEIAAQIEHIQQATTTAVAAIRDVSGMIARMSGA
                     GTAVAAAMEEQGSATQEIARNIQEAARGTQQVSSSMNAVREAAGGTDEAASRVQAAAR
                     DLTRHSGELGRELGALLAEMRAA"
BASE COUNT          262 a          672 c          641 g          323 t
ORIGIN      
        1 agaaggcgcc tggcgcatga tctgtcctcc tccagcaatt acgcttgaac gtaccggccg
       61 gtcgacgagg gcgcaggagg agccgggcgg cacagcggca gcggcccgcg acgatcatca
      121 tctgcacgag agcgcgcgga aagccgccgc gacgaagtag atcactggaa caaagcgggc
      181 agtgtgaaag gctgcacagg ccgcatgccc gacttgtgtg caggatgccc cgcgcgcatg
      241 gggcgtgccg gcagcggcca cgcgtcttcg ccggccaaat gcctgcgcgc cgtgacttcg
      301 cgtcacgccg cccgcatctc ggccaagagc gcccccagct cgcgccccag ctcaccggaa
      361 tggcgcgtca ggtcgcgggc cgccgcctgc acgcggctcg ccgcttcgtc ggtgccgcca
      421 gcggcctcgc gcacggcatt catgctgctg ctgacctgct gcgtgccgcg ggccgcttcc
      481 tggatgttcc gcgcaatctc ctgggtggcg gagccctgct cctccatggc ggcggcgacg
      541 gcggtgccgg cgccgctcat gcgcgcgatc atgccgctga cgtcgcgtat cgccgcgacg
      601 gcggtcgtcg tcgcctgctg gatatgctcg atctgcgcgg caatctcgct ggtggcggtg
      661 ctcgtctggt tggccaacgc cttgacctca gcggccacga ccgcaaagcc ccttcccgcc
      721 tcccctgcgc gcgccgcctc gatggtggcg ttcaaagcaa ggaggttggt ctgcgaggcg
      781 acgccgctta tgagcgccac cacgtcaccg atcttctgcg cgcttgcagc caggctctgg
      841 atgatgccgt cggtgcgctg aacattctcg gcggtcttcg tggccgtggc cgaggaatcc
      901 atcacctgac gcgtgatctc gcgcaccgag gcggcgagtt cctcggtggc gcttgccacg
      961 gtctgcacgt tcatcgccgt ctgctcggcg gagcttgccg ccgtgaccgc ctgcatggcc
     1021 gtctcggccg ccgtctccga cagcgacgca gccgtcgttt ccatgccgag cgcggagttc
     1081 gacaaagcgt gcgtgagcgc gtcgacggac gactcgaaac gggcgccgat ctcctggagc
     1141 ttctgcgcac ggcgcacctt gccctgcgcc tcgcttgcgg aagtctcatc ggcgcgcgcc
     1201 ttgtcgatga gcgcctgctt gaacacctgc agcacgcccg caatcgtgcc gatctcggtg
     1261 cgctcgtcgc tcgcaggaac gctcgccgac aggtcgccgg ccgcgagcgc gcgcatcggc
     1321 gcgacgacgg acgcgatgcc gcgtgcgatg ctgcgcgtga tggcccacgc cgccgcaacg
     1381 ctgccgagaa atgccagcgc gatgatgatg gcgacgaggt tgagcgtcga tgcggcggcg
     1441 gcgttggcgc gctcgctggc cgcgtcggcg ccgctattct tgaccgcgac gatctcgtcg
     1501 acggctttca tggccgcttc gatcagcggt gcggcctttt cggtatagaa gagaccggcg
     1561 gcctccttgg cgtattgccg ggacagcgtc tggatctctt gcagggcggc gacatattgg
     1621 tcccagtcct ggctgaaccg gtcgtaatgc gcccgctccg ccgccgtcgc caggacctgc
     1681 tcgcgaccgt ggcgcgccac ctcgacgctg gcgattgccg cggcatagcg cttctcggcc
     1741 gcaccgaggc catcttcgtc ggtggccagg atatgctgga acacggccgt gcgcacgtcg
     1801 ccggcgccgg tcttgagcgc cgtggcccag cgcacgcccg gaagcgcgtc gccctgcacg
     1861 acacgcatca gtccatgaat tgtgcgcacg ctttgcag
//
LOCUS       DATAIQ010000790         2366 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_157403, whole genome shotgun sequence.
ACCESSION   DATAIQ010000790 DATAIQ010000000
VERSION     DATAIQ010000790.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2366)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2366)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2366
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_157403"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..711
                     /locus_tag="VHN20_13020"
     CDS             <1..711
                     /locus_tag="VHN20_13020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010967126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005992 - trehalose biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trehalose-6-phosphate synthase"
                     /protein_id="HEX2726734.1"
                     /translation="GVDRLDYSKGISQRIDAFSCFLDGNPAMRGRVTFIQITPKSRSQ
                     VPEYAQMERDIAEQIGATNGKYADLDWTPIRYTNRTFGHPSLMGLYRMARVGLVTPLR
                     DGMNLVAKEYVASQSAEDPGVLILSRFAGAASELEGALVVNPYDSEATAGAILRALSM
                     TLDERKERWAAMMARLESNTIQHWCRSFLDTLHRDASPDAATDGTGAVQREGVLEART
                     VSLSGSPEPRLPWRAYKS"
     gene            1029..1436
                     /locus_tag="VHN20_13025"
     CDS             1029..1436
                     /locus_tag="VHN20_13025"
                     /inference="COORDINATES: protein motif:HMM:NF019430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Spy/CpxP family protein refolding chaperone"
                     /protein_id="HEX2726735.1"
                     /translation="MSAEDRAAFADARIAALHAALKLNAEQEKLWPAVEQAVKDLASQ
                     RRSRRDGWREARRQLRDDFPAGLRSVAERQAAHAEALRRVADAVTPLYATLDEAQKRR
                     AGVLMRSFRRDAGRFAARSRDGRRHEWHRGGRG"
     gene            1596..1778
                     /locus_tag="VHN20_13030"
     CDS             1596..1778
                     /locus_tag="VHN20_13030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726736.1"
                     /translation="MLVRFDIRPDGEGWTIYDRLTDEPAVVAGYISVGLPFSDADEIV
                     DLLNTLELLKQKATVH"
     gene            complement(1980..>2366)
                     /locus_tag="VHN20_13035"
     CDS             complement(1980..>2366)
                     /locus_tag="VHN20_13035"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003532494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HEX2726737.1"
                     /translation="MPEWGMLPIPKKLLQQGVRDMLRISDARMSGTSYGACILHVSPE
                     AYVGGPLAAVRTGDLISIDVAKRSINVNLDEAEIQKRLKSWNPPSRDFPRGYNWLFAR
                     HVRQAHEGCDFDFLEGAGGIPEPEIH"
BASE COUNT          407 a          790 c          775 g          394 t
ORIGIN      
        1 ggcgtcgacc gcctcgacta ttccaagggc atttcgcagc gcatcgacgc gttctcctgc
       61 ttcctcgacg gcaacccggc catgcgcggc cgcgtgacct tcatccagat cacgcccaag
      121 tcgcgctcgc aggtgcccga atacgcgcag atggagcgcg acatcgccga gcagatcggc
      181 gccacgaacg gaaagtatgc ggatctcgac tggacgccga tccgctatac gaaccgcacc
      241 ttcggccacc cgagcctgat gggcctctac cggatggcgc gcgtcgggct ggtcacgccg
      301 ttgcgcgacg gcatgaacct cgtggccaag gagtatgtcg cctcgcaatc cgccgaggat
      361 cccggcgttc tgatcctgtc gcggttcgcc ggcgcggcct ccgagctcga aggcgcgctc
      421 gtcgtgaacc cctacgacag cgaagcaacc gcaggcgcca ttctccgcgc cctcagcatg
      481 acgctcgacg agcgcaagga gcgctgggcg gccatgatgg cgcgcctcga gagcaacacc
      541 atccagcact ggtgccgcag cttcctcgac acgctccacc gcgacgcctc tccggacgct
      601 gccacggacg gcaccggcgc cgtgcagcgc gagggcgttc tcgaagcgcg gaccgtcagc
      661 ctgtccggca gcccggagcc gcgcctgccg tggcgggcat acaaaagctg atctggacgg
      721 cgcgctggat ccccccgcac cggggcgctc ctgagggcac gcagctcacg cgccatgagg
      781 gggcggcggg cccttggctc aggccacggc ccgacgaagc acgtaaatta cgaaatggta
      841 aggccgacgc gatctccgcg taacgtccgg ggccgcagcc tcatcgtccg aacagacagt
      901 tcctggagag aacgatgaaa cggacgattg ccggtgtctt gttggggagt gcgatattcg
      961 cgactccggt cctggctcag caagggcatt ggacgcgcgg ccctgcggag cgaggatttg
     1021 ccggccgcat gtcggccgaa gaccgcgcgg cctttgccga tgcccggatc gccgcgctgc
     1081 acgctgcgct taagctcaac gccgagcagg agaagctttg gccggccgtc gagcaggccg
     1141 tcaaggatct cgcgtcgcag cgccgcagcc ggagagatgg gtggcgcgag gcgcggcggc
     1201 aattgcgcga cgacttccct gccggattgc gttcggttgc cgagaggcaa gccgcgcacg
     1261 ccgaggcttt gcgccgggtt gccgatgccg tcaccccgct ttatgccacg ctcgacgagg
     1321 ctcagaagcg ccgcgccggc gttctgatgc gcagcttccg ccgtgacgcc ggtcgatttg
     1381 ccgcccgcag ccgcgacggc cgtcgccatg agtggcatcg cggtggacgc gggtaactcg
     1441 ggctgacgaa cccgcttcag gttgaagtga gtgtcgtcta atctttccga gtcgcagaat
     1501 cgcggatcga ttccgggaca tgcgtttgcg gcaaggtggc caccccggac cacgtccggg
     1561 gcaggccttg cccgatcata acgaaagggg gcatcatgct tgtgcggttc gacatccgtc
     1621 ccgacgggga gggctggacc atttacgacc ggcttaccga cgagccggcc gtggtcgctg
     1681 gatatatctc cgtcggcctc cccttcagcg acgccgacga gatcgtcgat cttctcaaca
     1741 cgctcgagct gctgaagcag aaggcgaccg tgcattagac ggggatcgat tcagattgaa
     1801 tcgatcacgc cccgacatcc tttgagagcc gcatgatccc ggatccagtc cgggacaagc
     1861 ctttttcggc gaggcggtga ccacttcgcg tctcatactc tcgatcattc atgcgcgctt
     1921 cgccgacgcc gggagagctg ggcagggact atttccgcag ccgcgtcgac gcctgcgcct
     1981 cagtggatct ccggctcggg aatgccgccg gcgccttcga ggaaatcgaa gtcgcagccc
     2041 tcgtgcgcct ggcgcacgtg acgggcgaag agccagttgt agccgcgcgg aaaatcgcgc
     2101 gacggcggat tccacgattt caagcgcttc tggatctccg cttcgtcgag attgacgttg
     2161 atcgatcgtt tggcgacgtc gatcgagatc aggtcgccgg tgcggaccgc agccagcgga
     2221 ccgccgacat aagcttcggg cgagacgtgc aggatgcagg cgccgtagct ggtgccgctc
     2281 atgcgcgcgt ccgagatgcg cagcatgtca cgcacgccct gctgcagcag cttcttcgga
     2341 atcggcagca tgccccattc gggcat
//
LOCUS       DATAIQ010000791         1503 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_410364, whole genome shotgun sequence.
ACCESSION   DATAIQ010000791 DATAIQ010000000
VERSION     DATAIQ010000791.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1503)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1503)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1503
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_410364"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(263..>1503)
                     /locus_tag="VHN20_13040"
     CDS             complement(263..>1503)
                     /locus_tag="VHN20_13040"
                     /inference="COORDINATES: protein motif:HMM:NF015124.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEX2726738.1"
                     /translation="KAMRTSLDTAEVRGTYVSRREPSLWMIDKENGGKSDALNAGLNA
                     ARYPYICAVDADAILEEDALLRVAKPIIDDPELVVAAGGIVRIANGCTVDRGQVLDVR
                     LPKSRLATFQVVEYFRAFLVGRVGWARLHSLLIISGAFGLFKREAVEAAGGYSTDTVG
                     EDAELVVRMHRHLRERGEEYRIEFVPDPVCWTEAPESMRVLSRQRRRWQRGLAETLWR
                     HKAMFGRPRYGALGMIALPYFVLFELVGPLFEIASFVLLPVAYALGMLDASILVAFAI
                     VAVLLGVLLSVAALALEEFSFRRHPHGKEVIRMLVYAVTENFGYRQLVDWWRLLGLWD
                     VVRRRKGWGDMKRKGFEVLTPVAPIRLDGAAPLRNDLRSSGRHPAFETASPSGSAQAP
                     DESAERPGDRADLPVVGPPK"
BASE COUNT          257 a          518 c          520 g          208 t
ORIGIN      
        1 aggcctgccg ctaagtctag cggcgtttgg gttttcgcgt gcgggaacgg gcttcgccct
       61 tcggaacagc cttcggcctt caggacggca tccagccttc aggacggcct tcggccttcg
      121 ggggcgagtt gttggcggtt gtgtctttcc tctcgcggag gcggaaagcc ggcggaaggt
      181 ggaccggcgg cgattcctga ctatcgcccg cggctcgctt caggagacgg agcactggct
      241 tgcccgcgca ggggcgcgca acctacttgg gcggacctac gacagggagg tcggcacgat
      301 cgccaggacg ctcagcggac tcatcaggcg cctgagctga acccgaaggc gaagccgtct
      361 cgaaggctgg atgccgtcct gaagaccgaa ggtcgttccg aaggggcgca gccccgtcca
      421 aacgaatggg agcaaccggc gtcagcacct caaacccctt ccgcttcata tccccccacc
      481 ccttgcgcct gcgcaccaca tcccagagcc cgagcaaccg ccaccaatcc accagctgcc
      541 ggtacccgaa gttctcggtg accgcgtaga ccagcatgcg gatcacctcc ttgccgtggg
      601 ggtggcggcg gaaggagaac tcctccaggg ccagcgcggc caccgagagg aggacgccca
      661 gcaacacggc gacgatcgcg aaggcgacga ggatcgaggc gtccagcatt cccagcgcgt
      721 aggcgaccgg gagcagcacg aacgaggcga tctcgaacag cggtccgacc agctcgaaca
      781 gcacgaagta cggaagcgcg atcatgccca gcgcgccgta gcggggccgg ccgaacatcg
      841 ccttgtggcg ccacagcgtc tcggccaggc cccgctgcca gcggcggcgc tggcgcgaga
      901 gcacgcgcat cgactcgggc gcctcggtcc agcagaccgg gtcgggcacg aactcgatgc
      961 ggtactcctc gccgcgctcg cgcagatggc ggtgcatgcg cacgacgagc tcggcgtcct
     1021 cgccgacggt gtcggtcgag tacccaccgg cggcctcgac ggcctcgcgc ttgaacaggc
     1081 cgaacgcgcc ggagatgatc agcagcgagt gcagccgggc ccagccgacg cggccgacca
     1141 ggaacgcgcg gaagtactcg acgacctgga aggtggcgag ccgcgacttc ggcaggcgca
     1201 cgtcgagcac ctggccgcgg tcgaccgtgc agccgttggc gatccgcacg atgccgccgg
     1261 cggcgacgac cagctcgggg tcgtcgatga tcggcttggc gacccgcagc agcgcgtcct
     1321 cctcgaggat cgcgtcggcg tcgacggcgc agatgtacgg gtagcgcgcg gcgttcagcc
     1381 cggcgttcag agcgtcggac ttgccgccgt tctccttgtc gatcatccac agcgacggct
     1441 cgcgccgcga gacgtaggtg ccgcggacct cggcggtgtc gagcgacgtg cgcatcgcct
     1501 tcg
//
LOCUS       DATAIQ010000792         1684 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_133725, whole genome shotgun sequence.
ACCESSION   DATAIQ010000792 DATAIQ010000000
VERSION     DATAIQ010000792.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1684)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1684)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1684
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_133725"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..408
                     /locus_tag="VHN20_13045"
     CDS             <1..408
                     /locus_tag="VHN20_13045"
                     /inference="COORDINATES: protein motif:HMM:NF022779.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3137 domain-containing protein"
                     /protein_id="HEX2726739.1"
                     /translation="AATTVITAGGLIDDAIRASRPPQGLRRIRLDDLRFGHIFQVYGN
                     DEAEAHDLLIPSVRERMLSLAEASPKAPRFLAEPGVFWAALRNYASENLFEPPNLAEP
                     VDTGAGLAALSAEITSVLDLVDAVLKIDVRRPG"
     gene            554..1009
                     /locus_tag="VHN20_13050"
     CDS             554..1009
                     /locus_tag="VHN20_13050"
                     /inference="COORDINATES: protein motif:HMM:NF019845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HEX2726740.1"
                     /translation="MPDPEPGAGEVRVRIHVSGVNPSDWKTRSGTRPMAGPRVIPHSD
                     GAGVVDRIGRGVPEQRVGERVWVWNAQWKRAYGTVAEHVVLPSDQAVRLPDNVAFDVG
                     ACLGIPALTAHRAVTIDGSPAGKRCWWRAEQVRSATMRSRWQSCSGPPR"
     gene            979..1470
                     /locus_tag="VHN20_13055"
     CDS             979..1470
                     /locus_tag="VHN20_13055"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HEX2726741.1"
                     /translation="MAKLLGAAQVIATVNSPDKAEHARAAGADNVIDYRTEAVAARVL
                     ELTSGHGADRVVEVDLAGNSRLLPRLVVREGLCVAYGSNAPDITFEFGPMILSGAAVR
                     FFIVYELSASARRRGIADLTTWLEEGRLGHTVAADYSLERIAEAHEAVQQGRLVGSVV
                     ITL"
BASE COUNT          278 a          532 c          598 g          276 t
ORIGIN      
        1 gcggcaacca ccgtgatcac ggccggaggc ctcatcgacg acgcgatccg cgcttcgcgc
       61 ccgccgcaag ggctccggcg catccgcctc gacgacctga ggttcgggca catcttccaa
      121 gtctacggga atgatgaggc cgaggcgcat gacctgctga tcccgagcgt gagggagcgc
      181 atgctgtccc tcgccgaggc aagcccgaag gccccgcgct ttcttgcaga gccaggcgtg
      241 ttctgggccg cgctgcggaa ttacgcatcc gagaacctgt tcgagccccc caacctcgcg
      301 gaacccgtcg acaccggcgc cggcctcgcg gcgctgtccg cggaaatcac gtcagtgctc
      361 gacctggttg acgccgttct caagatcgac gtcagacgac cgggttgaaa tcttaggcgc
      421 cgtcaccgaa tgcagaagcc gccagcctag aatagggtag tgccggttca ttcctgacaa
      481 gcgagagggc gcgatgcgag cgggttggta cgagcgaaac gggcctgcgc gtgaggtcct
      541 gcaggtcggg gacatgcccg accccgagcc cggtgcgggc gaagtgcgcg tgcgcatcca
      601 tgtctcgggc gtgaacccgt cggactggaa gaccagatcg ggcacaaggc cgatggcagg
      661 gccgcgagtc attccgcata gcgacggggc cggcgtcgtc gatcgcatcg gtcgcggggt
      721 tccagagcaa cgtgtcggcg agcgcgtctg ggtgtggaac gcgcaatgga agcgggctta
      781 cgggacggtt gcggaacacg tggtgctgcc ttccgaccag gcagtccggc ttccggacaa
      841 cgtcgccttc gatgtgggtg cctgtctcgg cataccggcc ctgacggcgc atcgcgcggt
      901 cacgatcgac ggctcacccg cgggcaaacg gtgctggtgg cgggcggagc aggtgcggtc
      961 ggccactatg cgatccagat ggcaaagctg ctcggggccg cccaggtgat cgcgacggtg
     1021 aactcgcccg ataaggcgga acatgcgcgc gctgccggcg ccgacaacgt gatcgactac
     1081 cgcacggagg cggtcgccgc gcgcgtgctg gagttgacga gtgggcatgg cgccgaccgc
     1141 gtggttgaag tcgatctcgc cggaaattcg cggctgttgc cgcggctcgt cgttcgcgag
     1201 ggcctgtgtg tcgcctacgg ctccaacgcc cccgacataa cgttcgagtt cgggccgatg
     1261 atcctgagcg gtgccgcggt ccgcttcttc atcgtctacg agctctcggc gagcgcgcgc
     1321 cgtcgcggca ttgccgacct gacgacatgg ctcgaggagg gacggctggg gcacaccgtt
     1381 gcggccgact attccctcga gcgcatcgcc gaggcgcacg aggccgtcca gcaggggagg
     1441 ttggtcggca gcgtcgtaat cacgttgtga acgtgccgga aaaaagagcc ccgctcggct
     1501 atcgaacggg gcaagcaggt cgcaaaggat gtggcggacc ggagcggtgc ccgcggctta
     1561 gcggttgccg ctccgggggt tatcaatgtt tttccaggcc tgattgtgct ggccggagcg
     1621 gcccggatca caatccttca gctcggatgg gcgctggtcg ccgccgttgc cgacgccggc
     1681 attg
//
LOCUS       DATAIQ010000793         2255 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_455994, whole genome shotgun sequence.
ACCESSION   DATAIQ010000793 DATAIQ010000000
VERSION     DATAIQ010000793.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2255)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2255)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2255
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_455994"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..821)
                     /locus_tag="VHN20_13060"
     CDS             complement(<1..821)
                     /locus_tag="VHN20_13060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726742.1"
                     /translation="MPIQPEPWHGEFRPNLGTEGEGIIFAGLDLRLGPNNVTALTNGG
                     FVVTWNEFDRFGTNFIRAQLYDALGARVGGEIAVNTRALVGHNQENNEPAQTFDVAAQ
                     PGGGFVVAWARQANAGDIVFQRFDGTGAKLGLETDVVGGADVAAGANTGREWDPNIAT
                     LANGDFVVTWIEDSAAGTDIHGTTYTAAGVPLLGMTNSNLTFNVPAPPSRVIKDSDVA
                     ATPDGGIVITHRVQDDVFFRKFVQASFGGPFFFFETTSAQVSTQPAGVQRDGAIT"
     gene            1044..1571
                     /locus_tag="VHN20_13065"
     CDS             1044..1571
                     /locus_tag="VHN20_13065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726743.1"
                     /translation="MPVLLAIVGAVATGLFYWLIWGRGLEYVEHRWRASTGRRRDARR
                     RSAAIEQQRVAPLRAIADPRDAAIVLMLTVARQRGVPTPEQIAVVERCMREVLGFGAD
                     VTERRTAAAFAAEQVVSAEDALDHLAPVLRARLTGAERAELLDMLAQVAAVHDGPTYQ
                     QQRVIDLTERQLAAG"
     gene            1892..>2255
                     /locus_tag="VHN20_13070"
     CDS             1892..>2255
                     /locus_tag="VHN20_13070"
                     /inference="COORDINATES: protein motif:HMM:NF017088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PRC-barrel domain-containing protein"
                     /protein_id="HEX2726744.1"
                     /translation="MLKKHIGACLVGTALVSASLIAQTATSPAQQAPAAQPARSGQFM
                     HSLQSGQWRASKLVGVDIYGYDKDNRNDRDKIGDVSEVILDRNGNVEAVVVGVGGFLG
                     IGQTDVAIPFKSVEWRYDD"
BASE COUNT          378 a          746 c          766 g          365 t
ORIGIN      
        1 ctcgtgatcg cgccgtcgcg ctggacgccc gccggctgcg tgctgacctg ggcggatgtc
       61 gtttcgaaaa agaagaacgg cccgccgaaa ctcgcctgca cgaacttgcg aaagaagaca
      121 tcatcctgga cgcgatgcgt gatgacgatg ccgccgtccg gggtcgccgc cacatcgctg
      181 tcctttatga cgcgggacgg cggggcaggg acgttgaagg tcagattgga gttggtcatg
      241 ccgagaagcg gcactcccgc agccgtgtag gtcgtcccat gaatatccgt gcctgcagcc
      301 gaatcttcga tccaggtcac gacgaaatcg ccgttcgcaa gcgtggcgat gttggggtcc
      361 cactcccgcc ccgtattggc cccggcggcg acgtccgccc cgccgacgac gtccgtctcg
      421 agcccgagct tcgcgccggt gccgtcaaac cgctggaata cgatgtcgcc ggcgttggcc
      481 tgtcgcgccc aggccacgac gaagccgccg ccgggctgcg cggcgacgtc gaaggtttgg
      541 gcgggctcgt tgttttcctg attatgaccc acgagcgccc ttgtattgac ggcgatttcg
      601 ccgccgacgc gtgctccgag cgcgtcgtag agttgcgcgc ggatgaaatt ggtgccgaag
      661 cggtcgaact cattccacgt gactacgaag ccgccattgg tcagcgccgt gacgttgttg
      721 gggccgagcc ggagatccaa gccggcaaaa ataataccct cgccctcggt gccgagattg
      781 gggcggaatt cgccgtgcca tggttccggt tggatcggca tcgcggtgac tccctggctg
      841 gcccccgggg gcgccgcgtt tgcctcagag cgcgggccgc gacaattcaa tagtcacgaa
      901 tgccgcggct cattgtgatc cgcttcacac tcggcgccac acttcgcacg cggatgtcgc
      961 cgcgatcttt ttggcctgtt acggatcggc tatggtcggc gcggccgtca gccatccaaa
     1021 gcctccaccg taacggagcc cgcatgcccg tcctccttgc catcgtcggc gcggtcgcca
     1081 ccggactgtt ctattggctg atctggggca ggggactcga atacgtcgag catcgctggc
     1141 gcgcgtcgac cgggcgccgg cgtgacgctc ggcggcgcag cgccgccatc gagcagcagc
     1201 gcgtcgcgcc gctgcgcgcg atcgccgacc cacgcgatgc ggccatcgtg ctgatgctga
     1261 cggtcgcgag gcagcgcggc gtgccgacgc cggagcagat cgcggtcgtc gaacgctgca
     1321 tgcgcgaggt gctggggttc ggcgccgacg tgacggagcg gcgcaccgcg gcggccttcg
     1381 ccgccgagca ggtcgtatcc gccgaggatg cgctcgatca tctcgcgccg gtgctgcgtg
     1441 cgcgcctcac gggagccgag cgggcggagc ttctggacat gctggcgcag gtcgccgcgg
     1501 tgcatgacgg gcccacctac cagcagcaac gcgtgatcga cctcaccgag cgccagctcg
     1561 ctgccggata gagcatgatc cgggcgaagt ggatcccact tcgccgaaaa agatcatgcg
     1621 attcaaggag aagcagagcg ggatcgattc aattcgaagc gatcccacta aagcggccga
     1681 ggacccgcga tcgctctgca ccggagggtg tgcgccgtcc accgccgaca aaacgccccc
     1741 ggcgcgcgtg cccgcggtcc agcggtccag gaggagcagg tccaacgcgg gcctcgcgat
     1801 gcaggttccc ggcgccggaa accagggcga ggcctggccg ttgttgtgac atgcgcccgt
     1861 tcaagggcgc ggagcatcac ggagggttac aatgctgaaa aagcacatcg gcgcctgcct
     1921 ggtcggcacg gcgctcgtct cggcatcgct gattgcccag accgccacga gcccggcgca
     1981 gcaggccccg gccgcgcagc ccgcgcgcag cggccagttc atgcacagcc tgcaaagcgg
     2041 ccaatggcgc gcctcgaagc tggtcggcgt cgacatctat ggctacgaca aggacaaccg
     2101 caacgaccgt gacaagatcg gtgacgtcag cgaggtgatc ctcgaccgca acggcaatgt
     2161 cgaggcggtg gtggtcggcg tcggcggctt cctcggcatc ggccagacgg acgtggcgat
     2221 cccgttcaag tcggtcgagt ggcgctatga cgacc
//
LOCUS       DATAIQ010000794         2244 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_203198, whole genome shotgun sequence.
ACCESSION   DATAIQ010000794 DATAIQ010000000
VERSION     DATAIQ010000794.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2244)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2244)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2244
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_203198"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..481
                     /locus_tag="VHN20_13075"
     CDS             <1..481
                     /locus_tag="VHN20_13075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726745.1"
                     /translation="RGGEWRRVPQFAIAASLVYIAFNLGLSQTAHDRVRLRAPQVEAI
                     FASPEPVLFWRRKMVWRQEGVYRWASFSPLSGLGPAHGPIEPQLGNPLVLHAVRSDPA
                     LRNFLRWSVLPFAWAEPQRCAVVVALGDARYLSPGGYSRLSRETVLPRPCQAGGPAG"
     gene            490..1734
                     /locus_tag="VHN20_13080"
     CDS             490..1734
                     /locus_tag="VHN20_13080"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014414.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclopropane-fatty-acyl-phospholipid synthase
                     family protein"
                     /protein_id="HEX2726746.1"
                     /translation="MHSRGHHLMRSGLLFANGGGLLGRLFGSGVEWLLDLLDERIAEG
                     GIEATLPDGARRRIGFHAPGPTAVVTLNSWYALVRLATSGSIGWYRAWAKGEWRSPDP
                     VVLFELFMRNASNLGDAARAKGSVRLLNLFRHRLRDNGPLRARDNIAAHYDLGNDFYR
                     AWLDPTMTYSSALFDRGGNLEAGQRRKVQTLLDRLELKPGERLLELGCGWGSLAIEAA
                     RRGAQVVGLTLSTEQQEWARAAVRDAGVEDRVDIRLQDYREIDERFDRVASVEMVEAV
                     GQRWWPAYLDCIARSLGPGGSAALQLISIRHELFADYAASADFIQAYIFPGGCLIDEP
                     RFAALAAERGLDWRDRHGFGLDYAETLRQWRERYDAAVAAGRLQGFSAEFHDLWRYYL
                     MYCEGGFRGEGIDVAQVTLVKA"
     gene            1731..>2244
                     /locus_tag="VHN20_13085"
     CDS             1731..>2244
                     /locus_tag="VHN20_13085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010909083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNB domain-containing ribonuclease"
                     /protein_id="HEX2726747.1"
                     /translation="MKQIKDWSGALGAGLAAIRRQYKLPDGFPAEVDSAARAAASRGP
                     TDHVDRTAMPFVTLDPASSTDLDQAFAIERSGGDLLLHYAIADTGWFVRTGDPVDREA
                     WTRGVTIYLPGDKVRLYPAILSEGAASLLPDGERPAILFTVKVDPAGEVGLASVERAV
                     IRSRAKLAYAT"
BASE COUNT          341 a          745 c          777 g          381 t
ORIGIN      
        1 gcgcggcggc gaatggcggc gcgtgccgca gttcgcgatc gccgcaagcc tcgtctacat
       61 cgcgttcaac cttggcctca gccagactgc ccacgatcga gtgaggctgc gtgcgccgca
      121 ggtcgaagcg atctttgcct cgcccgaacc ggtgttgttc tggcgtcgca agatggtctg
      181 gcgccaagag ggcgtgtatc gctgggcgag cttttcgcca ttgtcgggcc tcggaccggc
      241 gcacgggccg atcgaacccc agcttggcaa tccgctggtg ctgcacgctg tccgcagcga
      301 tcccgcgctt cgtaacttcc ttcgctggtc ggtgcttccc ttcgcttggg cggagccgca
      361 gcgctgcgcg gtggtcgtgg cgctcggcga cgcccgctac ctcagcccag gcggctactc
      421 gcgcctcagc cgcgagacgg ttcttccgcg gccttgccaa gcaggcggac cagcgggata
      481 ggcgcggcaa tgcacagccg tggccaccat ctgatgcgat ccggcctgct gttcgccaac
      541 ggcggcggcc tcctgggcag gctgttcgga agcggtgtcg aatggctgct cgaccttctc
      601 gacgagcgca ttgccgaggg cggcatcgag gcgaccctgc cggacggcgc caggcggcgg
      661 atcggctttc atgcgcccgg gccgacggct gtcgtcacat tgaacagctg gtacgcgctc
      721 gtgcggctgg ccacgtcggg gtcgatcggt tggtaccgcg cctgggcgaa gggcgaatgg
      781 cgctcgcccg atccggtcgt cctgttcgaa ctgttcatgc gcaatgccag caacctggga
      841 gacgccgcgc gggccaaagg cagcgtgcgc ctgctcaacc tttttaggca ccgcctgcgc
      901 gacaacggac cgctccgggc gcgcgacaac atcgccgccc attacgatct cggcaacgac
      961 ttctaccggg cctggctcga ccccacgatg acctattcgt ccgcgctgtt cgaccgcggc
     1021 ggcaatctgg aggctggcca gcggcgcaag gtgcaaacac tgctcgatcg cctcgagcta
     1081 aagccgggcg aacgcttgct tgagctcggt tgcggctggg gaagcctggc gatcgaagct
     1141 gcccggcgcg gcgcgcaagt ggtgggcctg acgctttcga cggaacagca ggaatgggcc
     1201 cgggcggcgg taagggatgc gggcgtggag gatcgggtcg acatccgcct ccaggactat
     1261 cgcgagatcg acgagaggtt cgatcgcgtt gcttcggtcg agatggtcga agcggtcggc
     1321 cagcgctggt ggccggccta tctcgattgc atcgcgcgaa gcctcggacc cggcgggagc
     1381 gcggcgctcc agctgatcag catccgccac gagctgttcg ccgattatgc cgcaagcgcc
     1441 gacttcatcc aggcctacat ctttcccggc ggatgcctga tcgacgaacc gcggttcgcg
     1501 gctctcgcgg ccgagcgcgg gctcgactgg cgcgaccgcc acggcttcgg cctcgactac
     1561 gccgagaccc tcaggcaatg gcgcgaacgc tatgacgcgg cggttgcggc cggccgactg
     1621 cagggcttca gcgccgaatt ccacgacctg tggcgctatt atctgatgta ctgcgaaggc
     1681 ggttttcgcg gtgagggaat cgacgtggcg caggtcacgc tggtgaaggc gtgaagcaga
     1741 tcaaggactg gtcgggcgcg ctcggcgccg gcctcgccgc aattcgccga cagtacaagc
     1801 tgccggatgg cttccccgcg gaagtggatt cggcggcaag agccgccgct tcgcgcggcc
     1861 cgaccgatca tgtcgaccgc acggcaatgc cgttcgtcac cctcgacccg gcaagctcga
     1921 ccgatctcga ccaggcgttc gcgatcgagc ggtcaggcgg cgacctcctg ctgcattacg
     1981 cgatcgccga tacaggctgg ttcgtccgca ccggcgaccc ggtcgaccgc gaggcctgga
     2041 cgcgcggagt gacgatctat ctgccgggcg acaaggtccg gctttatccg gcgatcctca
     2101 gcgaaggggc ggccagcctg cttccggatg gcgagcgtcc ggcgatcctc ttcaccgtca
     2161 aggtcgatcc ggcaggcgaa gtgggcctgg cttcggtcga gcgcgcggtg atccgcagtc
     2221 gggcgaagct ggcctatgcg accg
//
LOCUS       DATAIQ010000795         1825 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_203201, whole genome shotgun sequence.
ACCESSION   DATAIQ010000795 DATAIQ010000000
VERSION     DATAIQ010000795.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1825)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1825)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1825
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_203201"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1136
                     /locus_tag="VHN20_13090"
     CDS             <1..1136
                     /locus_tag="VHN20_13090"
                     /inference="COORDINATES: protein motif:HMM:NF021624.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="methyltransferase regulatory domain-containing
                     protein"
                     /protein_id="HEX2726748.1"
                     /translation="AIIDLIYAKLKPGGVVYISYNAMPGWAQNSPLRQLFVEWLRGQG
                     EVTPERVNGALAFAERVRKTGAAYFEVNPQSGKRLDTIASMSRNYIAHEYFNREWSPS
                     YHSDVAADLAAAKLVFAGSSLISEQIDQLMIKPEALELLKEVPDPVARETVRDYFVNQ
                     QFRRDLFARGARQLSARERNDRLLATRFALRAPPPQLPLKVRFPLGEMTLNPTPYQLV
                     VDVLADGPLTLREMLAKPSLAALGENAAFRAVVILVAATFVAPALDPEGEAQRRVSTD
                     RFNRAMFSRTAGSRQEHTLASPVLGTGITVANIEQLFLTVEAAQAPDPIGSLMRLMDE
                     RQQQLLKEGKPVASAEEARSEVERTFGEFRRTRLPTYRQLGIV"
     gene            complement(1199..>1825)
                     /locus_tag="VHN20_13095"
     CDS             complement(1199..>1825)
                     /locus_tag="VHN20_13095"
                     /inference="COORDINATES: protein motif:HMM:NF020137.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005615 - extracellular space [Evidence
                     IEA];
                     GO_function: GO:0005509 - calcium ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M10 family metallopeptidase C-terminal
                     domain-containing protein"
                     /protein_id="HEX2726749.1"
                     /translation="GGGTDTYDLANYTTNVTIDLRPGNHSLFSNVQRANLGDGHYARG
                     NVFNALQSDGDPRSLIEVARGGSGADRLYGNEIANVLTGGGGNDFLYGFGGNDVLTGG
                     AGSDNFVFAGALGAAGVDAIRDFSVPADTIRIENAYFQALTRTGTLAAAAFHTGAAAH
                     DASDRIIYNKSSGALSYDADGTGLAAAPVQFAQLRAGLSLTYADIYVI"
BASE COUNT          283 a          628 c          628 g          286 t
ORIGIN      
        1 aggcgatcat cgacctgatc tatgccaagc tgaagcccgg cggcgtcgtc tacatcagct
       61 acaacgccat gcccggctgg gcgcagaact cacccttgcg ccagctcttc gtcgaatggt
      121 tgcgcggcca gggcgaggtc acgccggagc gcgtcaacgg cgcgctcgcc ttcgccgagc
      181 gggtgcgcaa gaccggcgcc gcctatttcg aggtcaatcc gcagagcggc aagcgcctcg
      241 atacgatcgc ctccatgtcg cgcaactaca tcgcgcacga atatttcaat cgcgagtggt
      301 cgccgtccta ccactccgac gttgccgccg acctggcggc ggccaaactc gtgttcgcgg
      361 gctcgagcct gatctcggag cagatcgatc agctgatgat caagcccgag gcgctggagc
      421 tgctcaagga ggtcccggac ccggtggcgc gcgagaccgt gcgcgactac ttcgtcaacc
      481 agcagttccg ccgcgacctg ttcgcgcgcg gcgcccgcca gctgtcggcg cgcgagcgca
      541 acgaccggct cctcgcgacg cgcttcgcgc tgcgggcgcc gccgccgcag ctgccgctca
      601 aggtccgttt cccgctcggc gagatgacgc tgaacccgac gccgtatcaa ctcgtcgtcg
      661 acgttcttgc cgacgggccc ctcacgctgc gcgagatgct cgccaagccg agcctcgcag
      721 cgctcggcga gaacgcggcc ttccgggccg tcgtcatcct ggtcgcggcg acgttcgtcg
      781 ccccggcgct cgacccggag ggcgaggcgc agcggcgcgt ctcgacggac cgcttcaacc
      841 gggccatgtt ctcgcgcacg gccggcagcc ggcaggagca caccctggcg tcgcccgtcc
      901 tcggcaccgg catcacggtg gccaacatcg agcagctctt cctcacggtc gaggcggcgc
      961 aggctccgga cccgatcggc tcgctgatgc gcctcatgga cgagcggcag cagcagctgc
     1021 tcaaggaggg aaagccggtc gcgtcggccg aggaggcgcg cagcgaggtc gagcgcacct
     1081 tcggcgaatt ccgccgcacg cgcttgccga cctaccggca gttggggatc gtctgaggtg
     1141 ttgccgctgc gcggcgacat catcctccga cgcttgtcgc cgcggagaac gatgagcgtc
     1201 agatcacgta gatgtcggcg taggtgagac tgagcccggc ccggagctgg gcgaattgga
     1261 ccggcgccgc ggcaaggccg gttccgtcgg cgtcgtaaga caacgcgccg ctactcttgt
     1321 tgtaaatgat gcggtcactg gcatcgtgcg ccgccgcgcc ggtatggaag gccgccgcgg
     1381 cgagcgtgcc ggtccgcgtc aaggcctgga agtacgcgtt ctcgatgcgg atcgtgtcgg
     1441 caggaacgct gaagtcgcgg atcgcatcga cgccggcggc gccgagcgcg cccgcgaaca
     1501 cgaagttgtc ggagccggcg ccgccggtca gcacgtcgtt gccgccgaag ccatacagga
     1561 aatcattgcc gccgccgccg gtcaggacgt tggcgatctc gttcccgtac agccggtccg
     1621 cgccggagcc gccgcgcgcg acttcgatca gcgagcgcgg gtcgccgtcg gattgcagcg
     1681 cgttgaagac gttgccgcgc gcgtaatgac cgtcgcccag gttggcgcgc tgcacgttcg
     1741 agaacagcga gtggttgccg gggcgaaggt cgatggtcac gttggtggtg taattcgcga
     1801 ggtcgtaggt gtcggtgccg ccgcc
//
LOCUS       DATAIQ010000796         1899 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_456032, whole genome shotgun sequence.
ACCESSION   DATAIQ010000796 DATAIQ010000000
VERSION     DATAIQ010000796.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1899)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1899)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1899
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_456032"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..264
                     /locus_tag="VHN20_13100"
     CDS             <1..264
                     /locus_tag="VHN20_13100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006724503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEX2726750.1"
                     /translation="LVTASYMDYHLPRAEDLPSFTVDMTVTPCPSNPLGIKGCGEAGA
                     IAAPAAVINAITNALGHEDIAMPATPQAVWRAAQKTAPRMAAE"
     gene            421..1224
                     /locus_tag="VHN20_13105"
     CDS             421..1224
                     /locus_tag="VHN20_13105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002712437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein subunit M"
                     /protein_id="HEX2726751.1"
                     /translation="MYAFEYHRPTSLRQAAALLAKSEDAKLLAGGHSLLPVMKQRLAA
                     PSALIDLGSIPGLSGIERTPRAVVIGAMTKHVEVETSPEVKEAIPALTEMVSVLGDPA
                     VRNRGTLGGSVAGNDPSTDWPAAVLGLGATVITNKRKIPADEYFKGLFETALEPGEIV
                     TKVSFPIPQKAGYKKFRHPASRYALVGVFVAKRSSEIRVAVTGAGANGVFRWTEAEQA
                     LAKRFAAKSLEELSASAEGLNSDIHADAEYRAHLIGVMARRAVAAAAAR"
     gene            1340..>1899
                     /locus_tag="VHN20_13110"
     CDS             1340..>1899
                     /locus_tag="VHN20_13110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HEX2726752.1"
                     /translation="MSDRSSLPTSIDETLSVMQGAGYVADRALATVLYLALRLGRPLF
                     LEGEAGVGKTEVAKVLAGSLGRRLIRLQCYEGLDVASAVYEWNYAGQMMAIRLAEAGG
                     AVDRAQLESDLFSERYLVKRPLLQALEPDTAGAPVLLIDELDRTDEAFEAFLLEVLAD
                     NQVTIPEMGTVKAEHPPITVITSNRTR"
BASE COUNT          322 a          653 c          657 g          267 t
ORIGIN      
        1 ctcgtgacgg cgagctacat ggactaccac ctgccgcggg ccgaggacct gccgtccttc
       61 acggtcgaca tgacggtgac gccgtgcccc tcgaacccgc tcggcatcaa gggatgcggg
      121 gaggccggcg ccatcgccgc gccggcggcg gtgatcaacg ccatcaccaa cgcgctcggg
      181 cacgaggaca tcgccatgcc ggcgaccccg caggccgtct ggcgtgcggc gcagaagacc
      241 gcgccgcgca tggcggcgga gtgacacggt gtgtcatccc cgggctcgtc ccggggatct
      301 cgatcgagcg gacgcggtcg tccgatcggg atggccggaa catgcccggc catgacggga
      361 aacgcgaata acaatgcggg atgggcttcg gccgcccggg acgactgacg gagaagagac
      421 atgtatgcat tcgagtatca ccgcccgacg agcctcagac aggcggcggc gctcctcgcc
      481 aagagcgagg acgcaaagct cctcgccggc ggccactcgc tgctgccggt gatgaagcag
      541 cgcctggcgg cgccgtcggc gctgatcgac cttggcagca tccccgggct cagcggcatc
      601 gagcgcacgc cgcgcgcggt ggtgatcgga gcgatgacga agcacgtcga ggtcgaaacc
      661 tcgccggagg tcaaggaggc gatcccggcc ctgaccgaga tggtctcggt gctcggcgac
      721 ccggccgtgc gcaaccgcgg cacgctcggc ggctcggtcg cgggcaacga tccctccacg
      781 gactggccgg cggcggtgct cggactcggc gccaccgtga tcaccaacaa gcgcaagatc
      841 ccggccgacg aatacttcaa gggcctgttc gagacggccc tcgagccggg cgagatcgtc
      901 accaaggtgt cgttcccgat cccccagaag gccggctaca agaaattcag gcatccggcg
      961 tcgcgctacg cgctggtcgg ggtgttcgtg gccaagcgct cgagcgagat ccgcgtcgcc
     1021 gtgaccgggg ccggcgccaa tggcgtgttc cgctggacgg aggccgagca ggcgctggcc
     1081 aagcgctttg cggcaaaatc gctcgaagag ctgtccgcgt ccgcggaagg gctcaacagc
     1141 gacatccatg ccgatgcgga atatcgcgcc cacctgatcg gcgtgatggc ccggcgcgcc
     1201 gtcgccgccg cggccgcgcg ctgacgccag cgacaaaccc cacccttgtc atggccgggc
     1261 ttgacccggc cacccgactt gtgaggcgca ggcgtcgaag gtatccggat ggccggggca
     1321 agcccgggca tgacaaggca tgagcgatcg atcttcgcta cctacctcca tcgacgagac
     1381 gctgagcgtg atgcagggcg ccggctacgt cgccgaccgc gcgctggcga ccgtgctcta
     1441 cctcgcgctc aggctcgggc ggccgctgtt cctcgaaggt gaggccgggg tcggcaagac
     1501 cgaggtcgcc aaggtgctgg ccggatcgct cgggcggcgc ctgatccggc tgcaatgcta
     1561 cgagggcctc gacgtcgcct ccgcggtcta cgagtggaac tatgccggcc agatgatggc
     1621 gatccgcctc gccgaagccg gcggcgccgt cgaccgtgcg cagctcgaaa gcgatctctt
     1681 ttccgagcgc tacctcgtca agcgtccgct gctgcaggcg ctcgagcccg acacggccgg
     1741 cgcgccggtc ctgctgatcg acgagctcga ccgcaccgac gaggcgtttg aggctttcct
     1801 gctggaagtg ctcgccgaca atcaggtgac tattccggaa atgggcaccg tgaaggcgga
     1861 gcatccgccg atcaccgtca tcacgtcgaa ccgcacacg
//
LOCUS       DATAIQ010000797         2166 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_456082, whole genome shotgun sequence.
ACCESSION   DATAIQ010000797 DATAIQ010000000
VERSION     DATAIQ010000797.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2166)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2166)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2166
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_456082"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..973)
                     /locus_tag="VHN20_13115"
     CDS             complement(<1..973)
                     /locus_tag="VHN20_13115"
                     /inference="COORDINATES: protein motif:HMM:NF012485.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein N-terminal
                     domain-containing protein"
                     /protein_id="HEX2726753.1"
                     /translation="MVIAIAASLAGLALIAGAALVPARAADARMIDLADSKLGGVRVI
                     VGKSETLRTSRGFVDLVVGDPEIADVMPLTDQTLYVLGKKIGTTNVAVYDASKQLVGV
                     IEIEVAYNTPRLAADMAGKGPSAVSIGSANGRTVLSGEVPDAVSAAKAVALAKQYGPE
                     VLNDLRVRGPQQVMLEVRFVEASRNAGRELGVNWEAVGRNFGNPTRAALNFAASAGTG
                     ALASGHTPFGALVGRVLSSGVEADILVQALEERGLARRLAEPNLIAMSGEKASFLAGG
                     EFPIPVAADQGRVTVDYKKFGVGLTFTPTVLANGVINLKIEPEVSQLD"
     gene            1241..1975
                     /locus_tag="VHN20_13120"
     CDS             1241..1975
                     /locus_tag="VHN20_13120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726754.1"
                     /translation="MGTVHFDHPMWLTMRGSLALQRRKLPSATRSDTGLVLRTLGLAA
                     LAAALALGVVTGGVFDPGAAGLFMEGSGPGDGKDASRLDLGDKRAALANTELATPAGA
                     EETAGLAAPQATLDADSRDQTPAWREEEFAAVKVVDGRTLSAGAVTIRLDGLELPHRE
                     QVCRTLDNRLEPCASRAATQLELLTRSRTVACRYRMTTSSEAIGSCRIGPQDLAERLL
                     RTGYVRASETGNPVVTSALPSAPAPR"
BASE COUNT          343 a          746 c          735 g          342 t
ORIGIN      
        1 ggtcgagctg gctcacttcc ggctcgatct tcaggttgat gacgccgttg gcgagcacgg
       61 tcggcgtgaa tgtcaggccg acgccgaatt tcttgtagtc gaccgtgacg cggccctggt
      121 cggctgcaac cgggatgggg aattcaccgc cggccaggaa gcttgccttc tcgcccgaca
      181 tggcgatcag gttgggctcg gcgagccgac gcgccagccc gcgctcctcg agggcctgga
      241 cgaggatgtc ggcctcgaca ccgctcgaca ggacgcggcc gacgagtgcg ccgaagggtg
      301 tgtggcccga ggcgagcgcg cccgtgcccg cactggcggc gaagttgagc gcggcgcggg
      361 tcgggttgcc gaaattccgg ccgaccgcct cccagttcac accaagctca cggcccgcgt
      421 tgcgcgacgc ctcgacgaac cgcacctcga gcatgacctg ctgcgggccg cgcaccctga
      481 gatcgttgag cacctcgggg ccgtattgct tggcgagggc caccgctttt gcggccgaga
      541 ccgcgtccgg cacctcgccg gacaggacgg tgcgcccgtt ggcggagccg atgctcaccg
      601 cgctgggccc tttcccggcc atgtcggcgg ccaggcgagg cgtgttgtac gcgacctcga
      661 tctcgatgac tccgacgagc tgcttggacg cgtcgtagac cgcgacgttg gtggtgccga
      721 tcttcttgcc gaggacgtag agcgtctgat ccgtcaacgg catcacgtcg gcgatctcgg
      781 ggtcgccgac cacgaggtcg acgaagccgc ggctggtgcg cagggtctcc gacttcccga
      841 caatgacgcg cacgcctccg agcttgctgt ctgcgaggtc gatcatgcgg gcgtcggctg
      901 cgcgcgccgg aaccagggcc gcacctgcaa tcaaagccag tccggccagc gacgcggcga
      961 tggcgatgac cacgctgcgc cggctgaacc gcgcacgcgt ctcagtccaa gctaccgccc
     1021 cccgctggtc ctgtccgcgc atcttgaact cccgcaaccc gtactcgtcg agtccaagag
     1081 actccggatg ctctaaacca tcagtgaatg tgagccgcga cagccccggt tatggttgat
     1141 ggagcgtaaa atcgagaaat gcgggtcagc ctgcgccgtt tttcacgaat tctcaggaga
     1201 tgatgctgtt gactgtgcga gacggcattg cggaagcaag atggggaccg ttcacttcga
     1261 ccatcccatg tggctcacga tgcgcggcag cctcgcgctg cagcgtcgca agcttccgtc
     1321 cgccacgcgc tcggacaccg gccttgtcct tcgcacgctc ggcctggcgg cgctcgccgc
     1381 cgccttggcg ctgggcgtgg taaccggagg cgttttcgat cccggtgccg cgggcctgtt
     1441 catggagggg tccgggccag gcgacggcaa ggacgcgagc cgcctcgacc tcggcgacaa
     1501 gcgcgccgcg ctggcaaaca ccgagcttgc cacgccagcc ggcgcggaag aaaccgctgg
     1561 cctggcagcg ccgcaagcga cgctcgacgc cgacagccgg gaccagaccc cggcgtggcg
     1621 cgaggaggag ttcgccgcgg tcaaggtcgt ggacgggcgc acgctgagcg ccggggccgt
     1681 gaccatcagg ctcgacgggc tcgagcttcc gcaccgcgag caggtctgcc gcaccctcga
     1741 caaccgtctc gaaccctgcg cctcccgggc agcgacgcaa ctcgagcttc tgacgcggtc
     1801 gcgcacggtg gcgtgccgat accgcatgac gacgtcgagc gaggcaatcg gctcgtgccg
     1861 gattggaccg caggatctgg ccgagcgcct gctccgcacc ggctacgtgc gcgcgtcgga
     1921 aaccggcaat ccggtggtca ccagcgcttt gccgagcgcg ccagcgccgc gctgatttat
     1981 cgagccggct gggccgttcg tcgccccttt caagccgacg ctgccgcagg ggactttttc
     2041 gtggccgcac ggttcgcgat cgctcccaac ccgaactcca cgactgacgg gcacaggaac
     2101 cgggtggtgc tccgcgcagg ccggtcgtaa tgctgcaggc atgagcgaca ccgcgatcaa
     2161 gacgac
//
LOCUS       DATAIQ010000798         3510 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_318229, whole genome shotgun sequence.
ACCESSION   DATAIQ010000798 DATAIQ010000000
VERSION     DATAIQ010000798.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3510)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3510)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3510
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_318229"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            113..778
                     /locus_tag="VHN20_13125"
     CDS             113..778
                     /locus_tag="VHN20_13125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018096326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX2726755.1"
                     /translation="METIRFIVANLPVIGQRALEHISIVGVSVAIAILTGVPIGILIT
                     QSKKAADRLLYVASVIMTIPSIALFGLLIPVLSLIGQGIGYLPAVIALILYSQLPIIR
                     NTYTAVMNVDPALREAARGMGMTALQRLREVELPIALPVIISGVRNAVVLNIAIAAIA
                     TYIGAGGLGTFISRGISQTDIRQLVTGALAVSLLAIVADYALLAVQRALTSPGLRTSA
                     EAS"
     gene            775..1881
                     /locus_tag="VHN20_13130"
     CDS             775..1881
                     /locus_tag="VHN20_13130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003527008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2726756.1"
                     /translation="MIRLERVTKVFGAVTAVDAVDMEVPAGAVCVLLGPSGCGKTTTM
                     KMINRLIPPSSGRIYVDGRDTAEVDEVSLRRSIGYVIQQIGLFPNKTVEDNICVVPDL
                     LGWDRRKSRARAAELLRMVNLDPMIFLKRYPKELSGGQQQRVGVVRALAADPPVLLMD
                     EPFGAIDPINREVIQDEFMKLQAELKKTIVFVSHDIDEAVKMATHIAIFRDGRLIQYD
                     TPDSILARPADAFVADFVGSDRTLKRLRLVRVADAMMKDPPRVRAEDTLETAVRLMQD
                     HGHTSIVMVGPRGRARGLVRLDVAREKKGTVAEHQEPLPGVVKVDDDLRTAVSLIFTH
                     GVTWLACVDDDGFYKGYVSQRSITHALGAAYRDE"
     gene            1884..2648
                     /locus_tag="VHN20_13135"
     CDS             1884..2648
                     /locus_tag="VHN20_13135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011969991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX2726757.1"
                     /translation="MVKSRIMLAAKLVQTPSVRSWMRFALVVAAFAFGAYLQARGVLP
                     AILGYSSDVTYLIRQHLALTAMSGCLAIAVGLPLGILLTRARFRRYANAVTQFVNLGT
                     TIPTLAIIALAMSVFGIGAPPAIFGLFVLTLLPIVLNTIAGLRMVPAHLIEAARGMGM
                     TPGQILRRVELPNAVFVILAGIRTALAINVGTVPLAFLIGGGGLGELIFTGIDLMEPT
                     MLLAGAIPTELLAILVDFAIGQCQYWLVPRGVNPLR"
     gene            2694..>3510
                     /locus_tag="VHN20_13140"
     CDS             2694..>3510
                     /locus_tag="VHN20_13140"
                     /inference="COORDINATES: protein motif:HMM:NF015995.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine ABC transporter
                     substrate-binding protein"
                     /protein_id="HEX2726758.1"
                     /translation="MLKRTVLTYAIAAATLMLGAATASAQTIVVGGKNFTEQQLMSEM
                     TAQLLRAKGFTVDKRAGLGSAPLRQAQEAGQIDVYWEYTGTSLITYNKVTDKLDPAAT
                     YAKVKELDAAKGLVWLNPSKANNTYALAMRKADAAAKNIKSISDLAAKVKGGDNLKFA
                     SNAEFYARPDGLAPLQKTYGFEFGRENVVRMDTGLVYQALRDKQVEVGLVFATDGRVP
                     AFDFVILTDDKGYFPAYALTPVVRKETLDKNPKLAEILNSLSARLDDATMGKLN"
BASE COUNT          578 a         1210 c         1137 g          585 t
ORIGIN      
        1 gcccgcgatc cgcaagcatg gtcggaaata atgcggcggg tgtcgcaatc ttaatgttac
       61 gatcggggcc ggccttgaaa ctatgcggcg aggcgtcggc ttggagggtc cggtggagac
      121 gatcaggttc atcgtcgcaa accttcccgt gatcggccag agggcgctcg agcacatctc
      181 gatcgtcggc gtgtccgtgg cgatcgcaat cctgacgggc gtgccgatcg gcatcctcat
      241 cacgcagagc aagaaggcgg cggaccggct gctctacgtc gcctcggtga tcatgacgat
      301 cccctcgatc gccctgttcg gcctgctgat cccggtcctg tccctgatcg ggcaggggat
      361 cggctatctc ccggcggtga tcgcgctgat cctctattcg cagctgccga tcatccgcaa
      421 cacgtacacg gcggtcatga atgtcgatcc ggcgctgcgc gaggcggcgc gcggcatggg
      481 catgacggcg ttgcagcggc tgcgcgaggt cgagctgccg atcgcccttc cggtcatcat
      541 cagcggcgtg cgcaacgcgg tcgttctcaa catcgccatc gcggccatcg ccacctatat
      601 cggcgccggc ggcctcggca ccttcatctc gcgcggcatc tcgcagaccg acatccgcca
      661 gctcgtgacc ggggcgcttg cggtcagcct gctcgccatc gtcgccgatt acgcgctgct
      721 cgccgtgcag cgcgcgctga cctcgcccgg ccttcgcacc tcggcggagg cgtcatgatc
      781 cgtctcgagc gcgtcaccaa ggtgttcggg gcggtcacgg ccgtggacgc ggtcgacatg
      841 gaggtgccgg ccggcgccgt ctgcgtcctg ctcggcccgt cgggctgcgg caagaccacg
      901 accatgaaga tgatcaaccg gctgatcccg ccgagctcgg gccggatcta tgtggacggc
      961 cgcgacaccg ccgaggtcga cgaggtcagc ctgcggcgct cgatcggcta cgtgatccag
     1021 cagatcggcc tgttcccgaa caagaccgtc gaggacaata tctgcgtcgt gcccgatctc
     1081 ctcggctggg accggcggaa atcgcgcgcg cgcgccgccg aattgctgcg catggtcaac
     1141 ctcgatccga tgatcttcct caagcgctat ccgaaggagc tgtcgggcgg gcagcagcag
     1201 cgggtcgggg tcgtgcgggc gcttgccgcc gacccgccgg tcctgctcat ggacgagccg
     1261 ttcggcgcca tcgacccgat caaccgcgag gtgatccagg acgagttcat gaagctccag
     1321 gccgagctga agaagaccat cgtcttcgtg agccacgaca tcgacgaggc ggtgaagatg
     1381 gcgacgcata tcgccatctt ccgtgacggc cgcctcatcc agtacgacac gccggacagc
     1441 atcctggcgc gtccggcgga cgccttcgtg gccgatttcg tcggttcgga tcgcaccttg
     1501 aagcgcctgc gcctggtcag ggtcgcggac gctatgatga aggacccgcc gcgggtccgg
     1561 gccgaggata cccttgagac cgcggtccgg ctgatgcagg accacggcca cacctcgatc
     1621 gtgatggtcg ggccgcgcgg gcgcgcccgc gggctcgtcc ggctcgacgt ggcgcgcgag
     1681 aagaagggca cggtcgccga gcaccaggag ccgctgccgg gcgttgtcaa ggtcgatgac
     1741 gacctgcgca ccgccgtgtc gctgatcttc acgcacggcg tcacctggct cgcctgcgtc
     1801 gacgacgacg gcttctacaa gggctatgtc tcgcagcgct cgatcacgca cgcgctcggc
     1861 gcggcctacc gggacgagtg accatggtga agtcgcgcat catgctcgcc gcgaagctcg
     1921 tgcagacgcc gagcgtgcgg agctggatgc gcttcgcgct cgtcgtggcg gccttcgcgt
     1981 tcggcgccta cctgcaggcg cggggcgtgc tgcccgcgat cctcggctat tcgagcgacg
     2041 tcacctatct gatccgccag catctcgccc tgacggcgat gtccggctgc ctcgccatcg
     2101 ccgtcggcct gccgctcggt atcctgctga cgcgggcccg cttccgccgt tacgccaacg
     2161 ccgtcaccca attcgtcaat ctcggcacca ccatcccgac gctggcgatc atcgcgctgg
     2221 ccatgtcggt cttcggcatc ggcgcgccgc cggccatctt cgggctgttc gtgctgacgc
     2281 tcctgccgat cgtcctcaac acgatcgccg gcctgcgcat ggtgcctgcg cacctgatcg
     2341 aggcggcgcg cggaatgggc atgacgccgg gccagatcct gcgccgcgtc gagctgccca
     2401 atgcggtctt cgtgatcctg gccggcatcc gcacggcgct cgccatcaat gtcggcaccg
     2461 tgccgctcgc cttcctgatc ggcggcggcg gcctcggcga gctgatcttc accggcatcg
     2521 atctgatgga gccgaccatg ctcctcgccg gcgcgatccc gaccgagctg ctcgccatcc
     2581 tcgtcgattt cgcgatcggc caatgccaat actggctggt cccgcggggc gtgaaccctc
     2641 tgcgctgaag gagagggacg accacaacca ggcaagaacc agggaggaag aagatgttga
     2701 aacggacagt cctgacatac gccatcgccg ccgcgaccct catgctcggc gccgccaccg
     2761 cgtcggcgca gacgatcgtc gtcggcggca agaatttcac ggaacagcag ctgatgtcgg
     2821 aaatgaccgc gcagctgttg cgcgccaagg gcttcaccgt cgacaagcgc gccgggctcg
     2881 gcagcgcgcc gctcaggcag gcgcaggagg ccgggcagat cgacgtctat tgggaataca
     2941 ccggcacgtc gctgatcacc tacaacaagg tgaccgacaa gctcgacccg gccgcgacct
     3001 atgcgaaggt gaaggagctc gatgccgcca agggcctcgt ctggctcaat ccgtcgaagg
     3061 ccaacaacac ctacgcgctg gccatgcgca aggccgacgc cgcggccaag aacatcaagt
     3121 cgatctccga cctcgccgcc aaggtgaagg gcggcgacaa cctgaaattc gcatcgaacg
     3181 ccgagtttta cgcgcggccg gacggcctcg cgccgctcca gaaaacctac ggcttcgagt
     3241 tcggccgcga gaatgtcgtg cgcatggata ccggcctcgt ctaccaggcc ttgcgcgaca
     3301 agcaggtcga ggtggggctc gtgttcgcga ccgacgggcg cgttcctgcc ttcgacttcg
     3361 tcattctgac ggacgacaag ggctacttcc cggcctacgc gctcaccccc gtggtgcgca
     3421 aggagacgct cgacaagaac ccgaagctcg ccgagatcct caattccctg tcggcgaggc
     3481 tcgacgacgc gaccatgggg aagctcaacg
//
LOCUS       DATAIQ010000799         2049 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_341209, whole genome shotgun sequence.
ACCESSION   DATAIQ010000799 DATAIQ010000000
VERSION     DATAIQ010000799.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2049)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2049)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2049
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_341209"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..565
                     /gene="yihA"
                     /locus_tag="VHN20_13145"
     CDS             <1..565
                     /gene="yihA"
                     /locus_tag="VHN20_13145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015931832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ribosome biogenesis GTP-binding protein
                     YihA/YsxC"
                     /protein_id="HEX2726759.1"
                     /translation="IAFAGRSNVGKSSLVNALTGRKTLARTSHTPGRTQELNFFELGS
                     APGPGSDTGTRKLTIVDMPGYGYAAVGKAKVAAWTELIHAYLRGRANLARVFVLIDAR
                     HGLKDADAAVLDGLDKAAVSYQIVLTKADELKPAELERRVAETAVAIARRPAAFPEIR
                     PTSSRAGLGVPELRAGIARLLSERSRP"
     gene            588..941
                     /locus_tag="VHN20_13150"
     CDS             588..941
                     /locus_tag="VHN20_13150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019905637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF423 domain-containing protein"
                     /protein_id="HEX2726760.1"
                     /translation="MLIVLGALAGLLGVALAAAAAHHSGGANLETASRFLMLHAPVLL
                     AVAALAATGAVHPGIGRVAGWVIVLGLVLFCGDLAMRAFRGGALFPMAAPTGGFVLMA
                     GWALIALAALLRVWR"
     gene            1024..1917
                     /gene="argB"
                     /locus_tag="VHN20_13155"
     CDS             1024..1917
                     /gene="argB"
                     /locus_tag="VHN20_13155"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003991 - acetylglutamate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HEX2726761.1"
                     /translation="MNEPLPNVHVQAEILVQALPHMQRYDQQVVVIKYGGHAMGDRHA
                     AEDFAEDIVLLEQSGLKPIVVHGGGPQIGRMLDKLGIRSEFQAGLRVTDEATVEVVEM
                     VLAGSINKQIVGWIGAEGGKAVGLCGKDGNMVVARKATRTVVDPASNRERDVDLGYVG
                     EPAEVNRGVLDAVLKAELIPVLAPVALGADGQTYNVNADTFAGAIAGAMKAKRLLLLT
                     DVAGVLDKNKQLIPELTVEECRSLIADGTITDGMIPKIETCIYAVEQGVEAVVILDGQ
                     VPHAVLLELFTDHGAGTLIHR"
BASE COUNT          308 a          725 c          706 g          310 t
ORIGIN      
        1 gattgccttc gcgggacgct ccaatgtcgg caagtcgagc ctggtgaacg ccctcacggg
       61 gcgcaagacg ctggcgcgca cgtcgcatac gcctgggcgc acgcaagagc tcaatttctt
      121 cgagctgggc agcgcccctg gcccgggcag cgacacgggg acccgcaagc tcaccatcgt
      181 cgacatgccg ggctacggct acgccgcggt cggcaaggcg aaggtggcgg cctggactga
      241 gctgatccac gcctacctgc gcggccgcgc caacctggcg cgggtgttcg tgctgatcga
      301 tgcgcgccat ggcctcaagg atgccgacgc cgccgtgctc gacgggctcg acaaggcggc
      361 ggtgtcgtac cagatcgtgc tgaccaaggc cgacgagctc aagcccgccg agctcgagcg
      421 ccgcgtcgcc gagacggccg tggccatcgc caggcgcccg gccgcctttc ccgagatccg
      481 gccgacatcg agccgcgccg ggctcggcgt gccggagctg cgcgccggca tcgcgcgcct
      541 gctcagcgag cgctcgcgac cgtgatcatg ctgacgagga cgaggcgatg ctgatcgtgc
      601 tcggggccct ggccggcctt ctcggcgtcg cgctcgccgc cgccgccgcg catcattccg
      661 gcggcgccaa tctcgagacg gcgtcgcgct tcctgatgct gcacgcgcct gtgctgctcg
      721 ccgtcgcggc gctggcggca accggcgccg tccaccccgg catcggccgc gtcgccggct
      781 gggtgatcgt gctcggcctc gtcctgttct gcggcgacct cgccatgcgc gccttccgcg
      841 gcggcgccct gttccccatg gcggccccca ccggcggctt cgtcctgatg gccggctggg
      901 ccctcatcgc cctcgcggcc ctgctgcggg tgtggcggta gcgcctcggg ccgaaagcgg
      961 cttccgagga tcgctgtcct gggctagaag ccggccaacc gctgcccttc agagatgtcg
     1021 ccgatgaacg agccccttcc caacgtgcat gtgcaggccg agatcctcgt ccaggcgctg
     1081 ccgcatatgc agcgctacga ccagcaggtc gtcgtgatca aatacggcgg tcacgccatg
     1141 ggtgatcggc acgcggcgga agacttcgcc gaggacatcg tgctgctcga gcagtccggc
     1201 ctcaagccga tcgtcgtgca tggcggcggg ccgcagatcg gccgcatgct cgacaagctc
     1261 ggcatccggt ccgagttcca ggcggggctg cgggtgaccg acgaggcgac cgtcgaggtc
     1321 gtcgaaatgg tcttggcggg gtcgatcaac aagcagatcg tcggctggat cggcgcggag
     1381 ggcggcaagg ccgtcgggct ctgcggcaag gacggcaaca tggtggtcgc ccgcaaggcg
     1441 acccgcaccg tcgtcgatcc ggcctccaac cgtgagcgcg acgtagacct cggctatgtg
     1501 ggcgagccgg cggaggtgaa ccgcggcgtc ctcgacgccg tgctcaaggc ggagctgatc
     1561 ccggtgctgg cgccggtggc gctcggggcc gacgggcaga cctacaacgt caacgccgac
     1621 acctttgcgg gcgccattgc gggcgccatg aaggcgaagc gcctcctgct gctcaccgat
     1681 gtggccggcg ttctcgacaa gaacaagcag ctcatcccgg agctcacggt cgaggaatgc
     1741 cgcagcctga tcgccgacgg caccatcacc gacggcatga tcccgaaaat cgagacctgc
     1801 atctacgcgg tcgagcaggg cgtcgaggcg gtggtcatcc tcgacggcca ggtgccgcac
     1861 gcggtcctgc tcgagctgtt caccgaccac ggcgccggca cgctgatcca ccggtgatgg
     1921 gaacggccga tccattacgt catggccggg cttgtcccga ccatccacgt cttcctactc
     1981 accctaagac gtggatgccc gcgacaagcg cgggcatgac gcggtagcgg ctagtcaccc
     2041 ccatgacgt
//
LOCUS       DATAIQ010000800         1510 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_249500, whole genome shotgun sequence.
ACCESSION   DATAIQ010000800 DATAIQ010000000
VERSION     DATAIQ010000800.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1510)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1510)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1510
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_249500"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..396
                     /locus_tag="VHN20_13160"
     CDS             <1..396
                     /locus_tag="VHN20_13160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012252962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX2726762.1"
                     /translation="DAAPATKAAGTALLVDDEEAVRMSTADMLAELGYEVVEARSAEE
                     ALGLVNRGVHFDLLVTDHLMAGMTGVDLARAVRERRPEAPVLIVSGYAEAEGVAPDLP
                     RLTKPFRLPELAASVAQLGSDGRLLSRET"
     gene            680..>1510
                     /gene="msrP"
                     /locus_tag="VHN20_13165"
     CDS             680..>1510
                     /gene="msrP"
                     /locus_tag="VHN20_13165"
                     /EC_number="1.8.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012557370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016667 - oxidoreductase activity, acting
                     on a sulfur group of donors [Evidence IEA];
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase catalytic
                     subunit MsrP"
                     /protein_id="HEX2726763.1"
                     /translation="MLIGRPHDLRASEITPRAVYVSRRSLLAGVAGLIGAAALPYGAA
                     AAALAAAKSPLSTDEKPTSLKDVTSYNNYYEFGVDKDDPAANAHTLTTKPWTVRIDGL
                     VGKPADYALEDLIKPVALEERIYRMRCVEGWSMVIPWVGFPLSEVIKRVEPLGSAKYV
                     AFETLQRPAEMVGLRSFLKVLDWPYVEGLRLDEAMHPLTILAVGLYGETLPNQNGAPI
                     RLVVPWKYGFKGIKSIVRISFVEKQPPTSWNKQAPQEYGFYANVNPSVDHPRWSQASE
                     R"
BASE COUNT          262 a          519 c          498 g          231 t
ORIGIN      
        1 gacgcggcgc cggcaacgaa agccgccggg acggcgctgc tcgtcgacga cgaggaagcc
       61 gtgcgcatga gcacggccga catgctcgcg gagctcggat acgaggtcgt cgaggcacgc
      121 tccgccgagg aagccttggg cctcgtcaac cgcggcgttc acttcgacct gctggtcacc
      181 gaccacctga tggccggcat gacgggggtc gatctcgcgc gcgccgtccg cgagcggcgg
      241 ccggaggcgc cggtgctgat cgtctcgggc tatgcggagg cggaaggcgt cgcccccgac
      301 ctgccgcggc tgacgaagcc gttccgcctg ccggaactgg cggccagcgt tgcgcagctg
      361 ggctccgacg ggagacttct gagccgcgaa acatgacgca ggcggtcgac cgttccgggc
      421 gattgtcctg gagccgtttc cacctacatg gaatcgcctc cagcatgatc gattcagatt
      481 gaaccgatca tgctccgcta ctctttgtgc cgcatgatcc cggatccagt ccgggacaag
      541 ccttttccgg caaagtggtg cccacccccg gatcaagtcc gggggcaggc ttttgccgga
      601 tcatgccgta gcggaatcgt gaggcaacgg ttcatctgcc cgcgtgtatt gagagacgag
      661 atctcaggag aactgcccca tgttgatcgg gagaccgcac gacctgcgcg catccgagat
      721 cacgccccgg gccgtgtacg tcagccgccg atcgctcctt gcgggcgtgg cgggcctcat
      781 cggcgcggcc gccctcccct acggcgccgc cgcggcggcg ctcgcggccg cgaagagccc
      841 gctttccacc gacgagaagc cgaccagcct caaggacgtc acctcctaca acaactacta
      901 cgagttcggg gtcgacaagg acgatccggc cgcaaacgcg cacacgctca cgacgaagcc
      961 ctggacggtc cggatcgacg gcctcgtcgg caagccggcc gactacgccc tggaggacct
     1021 gatcaagccg gtcgccctcg aggagcgcat ctaccgcatg cgctgcgtcg aggggtggtc
     1081 gatggtgatc ccctgggtcg gctttcccct gtccgaggtg atcaaacggg tcgagccgct
     1141 cggcagcgcc aaatacgtcg ccttcgagac cttgcagcgc cccgccgaaa tggtggggct
     1201 gcgcagcttc ctgaaggtgc tcgactggcc ctacgtggag ggcctccgcc tcgacgaggc
     1261 catgcacccg ctgaccatcc tggccgtcgg cctctacggc gagacgctgc ccaaccagaa
     1321 cggcgcgccg atccggctgg tggtgccgtg gaaatacggc ttcaagggga tcaagtcgat
     1381 cgtccgcatc agcttcgtcg agaagcagcc gccgacgtcc tggaacaagc aggcgccgca
     1441 ggaatacggc ttctacgcca acgtgaaccc gagcgtcgac cacccgcgct ggagccaggc
     1501 gagcgagcgg
//
LOCUS       DATAIQ010000801         2035 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_318455, whole genome shotgun sequence.
ACCESSION   DATAIQ010000801 DATAIQ010000000
VERSION     DATAIQ010000801.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2035)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2035)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2035
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_318455"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..500
                     /locus_tag="VHN20_13170"
     CDS             <1..500
                     /locus_tag="VHN20_13170"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX2726764.1"
                     /translation="GGGLVLQWPLGWLSDRMDRRIVIAGMAFGTALVSALVAWAGASG
                     FPLAVIIACALWGGLALCIYATCVAHASDLVDATSIVPTISSLLISWAVGTIIGPVVA
                     APLMGRVGPYGLFIYAGIVALLLAMFVALRIGMRTRFPSPGGFVDLAPSSPATAALGR
                     QAGDA"
     gene            602..1033
                     /locus_tag="VHN20_13175"
     CDS             602..1033
                     /locus_tag="VHN20_13175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003597962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042314 - bacteriochlorophyll binding
                     [Evidence IEA];
                     GO_process: GO:0019684 - photosynthesis, light reaction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PRC-barrel domain-containing protein"
                     /protein_id="HEX2726765.1"
                     /translation="MPTELPNERAVRDPGSMQLDPSGDGIAIDETRRLIASNKVEGTP
                     VYNRAGEQLGTVYNFMVDKITGQVAYAVMSFGGFLGLGESYHPLPWRALTYDTRLGGY
                     VVDIDKDRLAQSPSHGAGEDPFVDDEYGAKVDAYYRSAPTS"
     gene            complement(1071..1622)
                     /locus_tag="VHN20_13180"
     CDS             complement(1071..1622)
                     /locus_tag="VHN20_13180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003599905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sarcosine oxidase subunit gamma family protein"
                     /protein_id="HEX2726766.1"
                     /translation="MIRGRRGCLRGEAGVRVAPREGLALATIIGGRDSTAQLDKALAD
                     LLGIAPPTRPTVARGRGGDLVWAGPGQWLLVSETRDIASQAATRLGGLAAVADQSAAR
                     AVLRLSGPRVRDALAKGCLLDLHPRAFRPGDAALTSIAHIGVHLWQSDDLPTYDVAVF
                     RSMAGSFWSWLSTSADEYGCEVV"
     gene            complement(1669..>2035)
                     /locus_tag="VHN20_13185"
     CDS             complement(1669..>2035)
                     /locus_tag="VHN20_13185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycine cleavage T C-terminal barrel
                     domain-containing protein"
                     /protein_id="HEX2726767.1"
                     /translation="RMMSTKKDFIGRVMAARPALLDPDRPALVGVKPIDPAQRLRAGA
                     HFIPVGERASAEHDEGYMTSVAFSPTLGHWIGLGLLRRGSERVGERLRAVDLLRNADI
                     EVQVCHPAFVDPAGERLNG"
BASE COUNT          301 a          720 c          688 g          326 t
ORIGIN      
        1 aggggggcgg tctcgttctg caatggcccc tcggctggct gtcggaccgg atggaccggc
       61 gcatcgtcat cgccggcatg gcgtttggga cggcgctggt ctcggcgttg gtggcctggg
      121 cgggcgcctc cggctttccg ctcgccgtca tcatcgcctg cgccctttgg ggcgggcttg
      181 cgctttgcat ctacgccacc tgcgtcgcgc atgcatcgga tctcgtcgat gccaccagca
      241 tcgtcccgac gatcagcagt cttttgatct cctgggccgt gggcacgatc atcggacccg
      301 tcgtcgccgc gccgctcatg ggccgggtcg gcccctacgg cctgttcatc tatgccggca
      361 tcgttgcgct gctgctggcc atgttcgtcg cgctgcgcat cggcatgcgg acgcgctttc
      421 caagtccagg cggcttcgtc gacttggcgc cctcgagccc cgccacggcc gcgctcggac
      481 gccaggccgg agacgcgtga cgtcgccgcg tccgtgcagt cccgggcggg ggggctgccc
      541 ctttcgaacg gaacccggcg ctgttcgtta tcctcccgac aggtttgtct ggagacgacg
      601 aatgccgacc gaattgccga acgagcgtgc cgtccgcgat cccgggtcga tgcagctcga
      661 cccctctggc gacggcatcg ccatcgacga gacccggcgg ctgatcgcct cgaacaaggt
      721 cgagggcact cccgtctaca accgcgccgg ggagcagctg gggacggtct acaacttcat
      781 ggtcgacaag atcaccggcc aggtcgctta cgcggtgatg tcgttcggcg gcttcctggg
      841 cctcggagaa agctatcacc cgctgccgtg gcgagcgctg acctacgaca cgcgcctcgg
      901 cggctacgtc gtcgatatcg acaaggaccg tctcgcccag tcgccgtccc atggcgccgg
      961 cgaggacccg ttcgtcgacg acgaatacgg ggccaaggtc gacgcctatt accgcagcgc
     1021 tcccacatcg tgatcgccga aattgcgcag cgcgattcga tcgcgcatgg tcacacgacc
     1081 tcgcacccgt attcgtccgc cgaagtcgag agccatgacc agaagctccc ggccatgctg
     1141 cggaatacgg cgacgtcgta ggtgggaaga tcatcgctct gccagagatg cacgccgata
     1201 tgcgcgatcg aggtcagcgc cgcatcacca ggccggaagg cacgcggatg caggtcgagc
     1261 aggcagcctt tggcgagtgc gtcgcgcacg cgcgggccgc tgaggcggag cacggcccgc
     1321 gcggcgctct gatccgccac cgccgcaagc ccgcccagcc gggtggcggc ctggctcgcg
     1381 atgtcacgcg tctcgctgac gagcagccat tgccccggtc ccgcccagac gaggtcgccg
     1441 ccgcgcccgc gcgcgaccgt gggccttgtc ggcggcgcga tacccaggag atccgccaag
     1501 gccttgtcca gttgggcggt gctgtcgcgg ccgccgatga tcgtcgccag agcgagccct
     1561 tcgcgcggcg cgacgcgaac gcccgcctcg ccgcgcaggc agccgcgccg gccgcggatc
     1621 aagatgccgt cccaggctcc ccgcgcagcc cacgcatgga cgtcgcggct agccattgag
     1681 gcgctcgcct gctgggtcga cgaaagccgg atggcagacc tgcacctcga tgtcggcgtt
     1741 acgcaggaga tcgacagcgc ggaggcgctc tccgacccgt tcggagcctc ggcgcagcag
     1801 gccgaggccg atccaatgcc ccagggtcgg cgagaaggcg acggacgtca tgtagccctc
     1861 gtcatgctcg gcgcttgcac gctcgccgac ggggatgaaa tgggcgcctg cgcgaaggcg
     1921 ctgcgcggga tcgatcggct tgacgccgac cagcgccgga cgatccgggt cgagcaacgc
     1981 cggccgcgcc gccattacgc ggccgatgaa gtccttcttc gtcgacatca tgcgg
//
LOCUS       DATAIQ010000802         1999 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_134099, whole genome shotgun sequence.
ACCESSION   DATAIQ010000802 DATAIQ010000000
VERSION     DATAIQ010000802.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1999)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1999)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1999
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_134099"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            66..812
                     /locus_tag="VHN20_13190"
     CDS             66..812
                     /locus_tag="VHN20_13190"
                     /inference="COORDINATES: protein motif:HMM:NF025380.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4230 domain-containing protein"
                     /protein_id="HEX2726768.1"
                     /translation="MDDPLTPKRARRIPAPVIAVMVAGALILGLLLGGAGSVGRWLFG
                     GGPNPETVASSALHSMRAQNRLVPFVARYVAVVSSRQERFGGLVSAERTLVLPGDVRY
                     ELDLSKLTERDIDWDESSQTLSVTLPEVEIAGPEVDLGAAREYGQGGVLGAVTDAEGQ
                     LDRANRARAVADLRKQAAGPVPMGLAREAGRQAVERSFALPLKVAGFERARVVARYAG
                     EKQRDPSYLDRSRSYEEVIEEQRARRAGGN"
     gene            813..1859
                     /gene="nadA"
                     /locus_tag="VHN20_13195"
     CDS             813..1859
                     /gene="nadA"
                     /locus_tag="VHN20_13195"
                     /EC_number="2.5.1.72"
                     /inference="COORDINATES: protein motif:HMM:TIGR00550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008987 - quinolinate synthetase A
                     activity [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="quinolinate synthase NadA"
                     /protein_id="HEX2726769.1"
                     /translation="MTDQPQSLKGVDLLAEIARLKQERNAVILAHYYQKPEIQDLADF
                     VGDSLDLSRKAAATDAEVIAFCGVRFMAETAKILSPEKIVVLPDMDAGCSLEDSCPPD
                     QFKAFREAHPDHIALTYINCSAAVKALSDIIVTSSSAEAILSQIPQDQKIIFGPDRHL
                     GGYLNRKFQRDMLLWPGICIVHQAFSETELLKLKAEHPGAPVAAHPECPPHIIDHSDH
                     VGSTKSILDFALSTDADTILVATEPHIIHQLEKAAPSKTFIGVPGGDGNCNCNMCPYM
                     ALNTLEKLYVALRDLEPRIELEPALMDAARKPLQRMLDMAGATVGQGDVGRPKLKSDE
                     LDAGTLSGPQVSGE"
BASE COUNT          336 a          678 c          674 g          311 t
ORIGIN      
        1 accgtcaccg cccacctgct ggacctcgag cggcgcgggc tcgttaagcg tgaggaagac
       61 gaacgatgga cgatccgctg acacccaagc gcgcgcggcg cattcccgcg ccggtgatcg
      121 ccgtgatggt cgccggcgcg ctgatccttg gcctgctgct cggcggggca gggagcgtcg
      181 ggcgctggct gttcggcggc ggcccgaacc cggagacggt tgccagctcg gccctgcatt
      241 cgatgcgcgc gcagaaccgg ctggtgccgt tcgtcgcccg ctatgtggcg gtggtgtcga
      301 gccgccagga gcggttcggc gggctggtca gcgccgagcg aacgctcgtc ctgccgggcg
      361 acgtgcgcta cgagctcgac ctgtcgaagc tgaccgagcg cgacatcgac tgggacgagt
      421 cgagccagac gcttagcgtc acgctgcccg aggtcgagat cgccgggccc gaggtcgatc
      481 tgggcgcggc ccgcgaatat ggccagggcg gggtgcttgg cgcagtgact gacgccgaag
      541 gccagctcga ccgcgccaac cgcgcccgcg ccgtcgccga cttgcgcaag caggccgccg
      601 ggccggtccc gatgggtctc gcccgcgagg ccggccgcca ggcggtcgag cgcagcttcg
      661 ccttgccctt gaaggttgcc ggcttcgagc gggcgcgggt tgtcgcccgc tacgccggcg
      721 agaagcagcg cgaccctagt tatctcgacc gctcgcgctc atatgaggaa gtgatcgagg
      781 agcagcgcgc ccgccgcgcc ggaggcaatt gagtgaccga ccagccgcaa tcgctgaaag
      841 gggtcgacct gctggccgag atcgcgcgcc tcaagcagga gcgaaacgcg gtcatcctcg
      901 ctcattatta ccagaagccg gaaatccagg atcttgccga tttcgtcggc gacagcctcg
      961 acttgtcgcg caaggcggct gccaccgacg ccgaggtgat cgcgttttgc ggcgtgcggt
     1021 tcatggccga aacggccaag atcttgtcgc ccgagaagat cgtcgtgttg cccgacatgg
     1081 acgccggctg cagcctcgag gattcctgcc cgcccgacca gttcaaggcg ttccgcgagg
     1141 cccatccgga ccatatcgcg ctgacctaca tcaactgctc ggcggcggtg aaggcgctca
     1201 gcgacatcat cgtcacttcg tcgagcgccg aggcaatcct ttcgcaaatc ccccaggacc
     1261 agaagatcat cttcggtccc gaccgccatc tcggtggcta cctcaaccgc aagtttcagc
     1321 gcgacatgct gctgtggccg ggcatctgca tcgtccacca ggcgttcagc gagaccgagc
     1381 tgttgaagct caaggccgag catcccggcg cgccggtcgc ggctcacccc gaatgcccac
     1441 cgcacatcat cgaccattcc gaccacgtcg gatcgaccaa gtcgatcctc gacttcgcgc
     1501 tgagcacgga cgcggacacg atcctggtcg cgaccgagcc gcacatcatc caccagctgg
     1561 aaaaggcggc gccgtccaag accttcatcg gcgttcccgg cggcgacggc aactgcaact
     1621 gcaacatgtg cccctatatg gcgctcaaca cgctcgagaa gctctatgtc gcgctgcgcg
     1681 atcttgagcc gcggatcgaa ctcgagccag cgctgatgga cgcggcgagg aagccgttgc
     1741 agcggatgct cgacatggcc ggcgcgacgg tggggcaggg cgacgtcggc cggcccaagc
     1801 tcaagagcga cgagctcgac gccgggacct tgagtggccc gcaggtcagc ggggagtaaa
     1861 ggcgccagac gcgcccgcgt ctcctttcac ggccgaccgc cgccgatggg ccgggcggac
     1921 acgtcgacga tcccggtttc cgggtgatgc ttgtcgaggt ggcgcttgac catcctcagg
     1981 ttgcggctgt tggagcgga
//
LOCUS       DATAIQ010000803         1905 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_134102, whole genome shotgun sequence.
ACCESSION   DATAIQ010000803 DATAIQ010000000
VERSION     DATAIQ010000803.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1905)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1905)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1905
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_134102"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(57..1001)
                     /locus_tag="VHN20_13200"
     CDS             complement(57..1001)
                     /locus_tag="VHN20_13200"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEX2726770.1"
                     /translation="MASKMTKTGSLVCDREFFIHDGKRLRRLRISAYLQLAVALAIGL
                     MVAFSTYSLVRFMSASANPSATAETGFPADITALAAETERRVIELEHRQQQLAAMLAG
                     KEIDPDVLRHIATVPTSGMGGPYEPVQADSASTFKQLFTSWKKLDSLQSGAIAVPSDK
                     PVKTARFESAFGERNDPFTGGRARHMGIDLSGPHGTPIHATADGLVAEAGWNSGGYGN
                     LIKVDHGRGVETRYAHLSKITVASGQRVKRGQLIGYMGSTGRSTGSHLHYEVRIEGRA
                     VNPIPFMKSTDYLLAMQRDTGHSMDGHAALGGPATAKR"
     gene            1371..>1905
                     /locus_tag="VHN20_13205"
     CDS             1371..>1905
                     /locus_tag="VHN20_13205"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013167782.1"
                     /note="catalyzes the formation of 3-phosphonooxypyruvate
                     and glutamate from O-phospho-L-serine and 2-oxoglutarate;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine aminotransferase"
                     /protein_id="HEX2726771.1"
                     /translation="MTDSKPPLPARPFFSSGPCAKPPGWSAARLDTESLGRSHRSALG
                     KRRLAYCIDLMREILELPATHRIGIVPGSDTGAFELAMWTMLGARPVTALAWESFGEG
                     WVTDAARQLRLDPAVIRADYGQLPDLDQIDWSSDVLFTWNGTTSGVRVPDGKWIAPDR
                     EGLSFAEETSAVLAYDLP"
BASE COUNT          313 a          609 c          653 g          330 t
ORIGIN      
        1 atggtggtgg agcactcacg cccgtcagat agggggccgt aacagcccgg acaagcctag
       61 cgcttggcgg tcgccgggcc gccgagcgcg gcatgcccgt ccatcgagtg gccggtgtcg
      121 cgctgcatgg caagcaggta atcggtcgac ttcatgaacg ggatcgggtt cacggcgcgg
      181 ccctcgatgc ggacctcgta gtgaaggtgg ctgccggtcg agcggccggt cgagcccatg
      241 taaccgatca gctggccgcg cttgacacgc tggccgctgg cgaccgtgat cttcgacaag
      301 tgggcgtagc gggtctcgac gccgcggccg tggtcgacct tgatgaggtt gccgtagccg
      361 ccgctgttcc agcccgcctc ggcgaccagg ccgtcggcgg tcgcgtggat cggcgtgcca
      421 tgcgggcccg acaggtcgat gcccatgtgg cgggcgcggc cgccggtaaa ggggtcgttg
      481 cgctcgccaa atgcggactc gaaccgcgcc gtcttgaccg gcttgtcgga cggcaccgcg
      541 atcgccccgc tttgcagcga atccagcttc ttccagctgg tgaacaattg cttgaaggtg
      601 ctcgcactgt cggcctgcac cggctcgtac gggccgccca ttcccgacgt cgggacggtg
      661 gcgatgtggc gcagcacatc ggggtcgatt tccttgccgg cgagcatcgc cgcaagctgc
      721 tgctggcgat gctcaagctc gatcacccgg cgctcggtct cggcggcaag cgcagtgatg
      781 tcggcgggga aaccggtctc ggcggtggcc gacggattgg ccgacgctga catgaaccgg
      841 accagcgaat aggtcgagaa ggcaaccatc aggccgatgg caagcgccac ggcgagctgc
      901 agataggcgg agattcggag tcggcggagg cgcttgccat cgtggatgaa gaactcgcgg
      961 tcacatacca gcgacccggt tttcgtcatc ttgcttgcca ttaccccacg ctcccaatgt
     1021 cggcggcgca gcgattgacc gcgcgcacgc ttgaacctcg aagtttaagg acctccccag
     1081 gccccccggt accgccagcc gtttgccacg aatggcggag ggtgtttttg agagcaggga
     1141 cggagcgaac gcaatgtctt gttccatggt taaggatgaa gtgcgggagc ggtgggacga
     1201 aatgagcgcg gcgcttgatt caggttaaga aaacgcgtcg caaccctcgg aaaggcttca
     1261 tgaattggca atctttcagg gcgcggttgc atggccccgc caattcgcta agcctcgccg
     1321 cgggccacgc cgtcccaacg cggcgcgtgc tctctgcgag gagagttgca ttgactgatt
     1381 cgaaaccgcc gctgccggcg cggccgttct tttcatccgg gccctgcgcc aagcctcccg
     1441 gctggagcgc ggcacggctc gataccgaaa gtctcggccg atcgcatcgc tcggccctcg
     1501 gcaagcgccg cctggcgtac tgcatcgacc tgatgcgcga gatcctggag ttgcccgcca
     1561 cgcaccgcat cggcatcgtt cccggctcgg acaccggcgc gttcgagctg gcgatgtgga
     1621 ccatgctcgg cgctcggccg gtcaccgccc tggcttggga aagcttcggc gaaggctggg
     1681 tgacggatgc ggccaggcag ctgcggcttg acccggccgt gatccgcgcc gactacggac
     1741 agctgcccga cctcgaccag atcgactggt cgagcgatgt gctgttcacc tggaatggca
     1801 cgaccagcgg cgtccgcgtg cccgacggca aatggattgc gcccgaccgc gaggggctga
     1861 gtttcgccga agagaccagc gcggtgctcg cctacgattt gccgt
//
LOCUS       DATAIQ010000804         1637 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_64831, whole genome shotgun sequence.
ACCESSION   DATAIQ010000804 DATAIQ010000000
VERSION     DATAIQ010000804.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1637)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1637)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1637
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_64831"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..624
                     /locus_tag="VHN20_13210"
     CDS             <1..624
                     /locus_tag="VHN20_13210"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEX2726772.1"
                     /translation="MHKIDELGAEPMDLPALRAYRGAGPNILFVGGLRPNKGHLRALD
                     AFAAYRQMSTRPARLFFVGSFDPHLASYVEELKTKVTDLGLESSVIFARSVTPAQLRS
                     FYYMASAFLCVSEHEGFCVPLVESMFFRVPVVAWDTTAVGDTLGDAGILLPSAHPEPL
                     AKALDEVIENPLLARGLADKGRERYEARFTTRAIRANLESLLDEVPR"
     gene            663..>1637
                     /locus_tag="VHN20_13215"
     CDS             663..>1637
                     /locus_tag="VHN20_13215"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX2726773.1"
                     /translation="MQRYGAEITGGSEMLCRQVAERLLGRYDVEVITTSALDHLSWQK
                     HYPAGLTTLNGVSVRRFDAAEERNRPRFQELYDRLFASPLTPAEESDLIRYQGPYAPA
                     LVEHLRTRQNDYAAFLFFTYLYYPTIAGLPEVRHKAALVPTLHDESSLYLHTLDALFH
                     MTPWLLFLTPEEMLLAQRRFNLPAHSGRLAGIGIEDAEVGAADPAWPALRDRLRDKRV
                     LTYIGRVENGKGCDELTAFFEHWAAEQGRRDVVLLLLGNRTMKLPDHPQIIAPGFVSE
                     YVKYHALEHTDVAVAPSPLESLCIAALESWLHQRPVLANGRSPVLAGHC"
BASE COUNT          267 a          533 c          540 g          297 t
ORIGIN      
        1 atgcataaga tcgacgaact cggagccgag ccgatggatc tgccggctct gcgcgcctat
       61 cgcggcgcgg gtccgaacat cctgttcgtc ggggggctgc ggcccaataa gggccatctg
      121 agagctctcg acgcctttgc cgcctaccgg cagatgagca cgcgtccggc acgcctcttt
      181 ttcgtcggca gcttcgatcc ccatctggcg agctatgtgg aggagctcaa gaccaaggtg
      241 accgatctcg gactcgaatc gagtgtgatc ttcgcgcgct cggtcacgcc ggcgcagctt
      301 cgcagctttt actacatggc ctcggcgttc ctctgcgtga gcgagcacga aggtttctgc
      361 gtgccgttgg tcgagtcgat gttcttccgc gtgcctgtgg ttgcctggga cacgacggcc
      421 gtcggagaca cactagggga tgcggggatc ctgctgccgt cggctcatcc cgagccgctg
      481 gcgaaagcgc tcgacgaggt gatcgagaat ccgctgctag cgcgcggcct cgccgacaaa
      541 ggccgggagc ggtacgaagc gcgcttcacg acccgcgcca tccgcgcgaa cctggaatcg
      601 ctgctcgacg aggtgccgcg ctagtgcagg ctccgggagc gcgggcgaag atcgggtgcg
      661 tcgtgcagcg ctacggcgcc gagattacgg gtggatcgga gatgttgtgc cggcaggtag
      721 ccgagcggct gctcgggcgc tatgacgtgg aagtcattac cacgtcggcg ctcgaccatc
      781 tgagctggca gaagcactac ccggccggcc tgacaacgct caacggcgtt tccgtgcggc
      841 gattcgatgc cgccgaagag cgcaaccggc cgcggtttca ggagttgtat gaccggctgt
      901 ttgcctcccc gctgacgccg gccgaggagt ccgatctgat ccggtatcag gggccgtatg
      961 cgccggcact ggtcgagcat ctacgcacgc gacagaacga ctacgcggcg tttcttttct
     1021 tcacctatct ctactacccc acgattgccg ggctgccgga ggtgcgtcac aaggcggcgc
     1081 ttgtcccaac gctgcacgac gagagctcgc tctatctgca cacactcgat gcgctgttcc
     1141 acatgactcc gtggctcctc ttcctcacgc ccgaggagat gctgctggcg cagaggcgct
     1201 tcaatctgcc ggcgcatagc gggcgcctcg ctgggatcgg catcgaggat gcagaagtgg
     1261 gcgccgccga tccggcatgg cccgcgctgc gggaccggct gcgtgacaag cgggtgctca
     1321 cctacatcgg acgcgtcgag aacggcaagg gctgcgacga gctcaccgcg ttcttcgaac
     1381 actgggcggc ggagcagggg cgccgcgacg tggtcctgct gctgctcggc aaccggacta
     1441 tgaagttgcc cgaccatccg caaatcattg cgccgggctt cgtgtcagag tacgtcaagt
     1501 atcacgcgct cgagcacacc gacgtcgccg tcgctccctc gccgctcgaa agcctctgca
     1561 tcgccgcgct cgaatcgtgg ctgcaccagc ggccggtgct cgccaacggg cggtcgccgg
     1621 ttctggccgg gcactgc
//
LOCUS       DATAIQ010000805         4035 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_41361, whole genome shotgun sequence.
ACCESSION   DATAIQ010000805 DATAIQ010000000
VERSION     DATAIQ010000805.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4035)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4035)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4035
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_41361"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            50..1210
                     /locus_tag="VHN20_13220"
     CDS             50..1210
                     /locus_tag="VHN20_13220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017483792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20 aminoacylase family protein"
                     /protein_id="HEX2726774.1"
                     /translation="MTVVDRITAYADDLVALRRDLHANPEIGFTEERTSNIVAQLLAE
                     WGIEVHRGIGKTGVVGVLRGRGGNYRRIGLRADMDALPIEEVADVPFRSTRPGVMHAC
                     GHDGHTTMLLGAARYLAETRSFDGTAVFIFQPAEEGLGGARAMLADGLFERFPCDEIY
                     ALHNLPDGPRGRVAVKAGPAMAGADFFDIRITGRGAHGAYPNKAIDPTIVAVTLAQAI
                     QTIVSRNADPLQAVVVSITQIHAGSAYNVIPETAQLSGTVRVLDDGARALVRERVHAL
                     AAGIGAAFGATVDVDFRNVFTVLNNHDEQAAAIGATAADLFGSDNVTWLEQPRMGSED
                     FADMLQVVPGAYVWLGQTPGPGLHNPAYQFDDAILPLGAALLARMVETRSAG"
     gene            1254..2399
                     /locus_tag="VHN20_13225"
     CDS             1254..2399
                     /locus_tag="VHN20_13225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015667572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isobutyryl-CoA dehydrogenase"
                     /protein_id="HEX2726775.1"
                     /translation="MQFALSDEQRAIRDMAQGFAAEKLAGNALAWDQQKIFPVDVMRE
                     AAALGMGGIYVRDDVGGSGMTRLDAALIFEALATGCPTVAAYISIHNMVAWMIDVFGS
                     DAQRQAWLPSLCTMDRLGSYCLTEPGSGSDAAALVTRAVRDSDVYVVDGVKQFISGAG
                     VSDLYVTMVRTGGSGADGISTLVIEKNTPGLSFGAQERKMGWNAQPTRQVIFERCRVP
                     VANRLGPEGVGFRMAMRGLDGGRLNIGACSLGGAQAALDKSLAYTTDRKAFGQRLSDF
                     QALQFRLADMATELECARTFLWRAAAALDAGDPEATRLCAMAKRVATDTGFTVANDAL
                     QLHGGYGYLADYGIEKIVRDLRVHQILEGTNEIMRVIIARGLVGRDQ"
     gene            2396..3490
                     /locus_tag="VHN20_13230"
     CDS             2396..3490
                     /locus_tag="VHN20_13230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011663807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HEX2726776.1"
                     /translation="MTQTRGIAATESDEVLVRRDGALGHIRLNRPRALNSLTLDMVRA
                     ISGALDAFEADDRVAAVLVDGAGERGLCAGGDIRAIYDSARRRDGHAQRFLREEYALN
                     ARIASYPKPYVAIMDGITMGGGVGISAHGSHRVGTERTRFALPEVAIGFFPDVGATWL
                     LPRAPGETGTWIALTGESLGPHDTIHAGLADVFVGSADLPAVHEGLAALAPSTTAADV
                     SATLRRLSSPPEAGRLAGDRPAIDRLMAFADAAAIRRALENDGSAFAQGVLHAMAAAS
                     PTSLALTVRLLRLGRAAASLEDCLISEYRAACRALHGHDFLEGIRAAVIDKDRQPRWS
                     PARLDDIGEGLIGEHLAPADGEETIFPGKG"
     gene            3533..>4035
                     /locus_tag="VHN20_13235"
     CDS             3533..>4035
                     /locus_tag="VHN20_13235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012320715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HEX2726777.1"
                     /translation="MGETIAFIGLGNMGGPMTANLVKSGRRVVGFDMSAACRDAAQGN
                     GVAIAGSAAAAVADADVVITMLPAGQHVLSVWAETVAAAPAKTLFIDCSTIDIESARK
                     AHALAAEHARPALDAPVSGGVAGATAATLTFMAGGSREAFAQGEPILAAMGKRVVHCG
                     EAGAGQAA"
BASE COUNT          603 a         1424 c         1431 g          577 t
ORIGIN      
        1 ccatctgcgc ctcacgcagc ctcaggcctg aggcggggag acaaagcaca tgaccgtcgt
       61 ggaccgcatc accgcctatg ccgacgacct cgtcgcgttg cgcagggatc tgcacgccaa
      121 cccggagatc ggctttaccg aggagcgcac ctccaacatc gtcgcgcaac tgctcgccga
      181 atggggcatc gaggtgcatc gcggcatcgg caagaccggc gttgtcggcg tgctgcgggg
      241 caggggaggg aactaccgcc gcatcggcct gcgggccgac atggacgcgc tgccgatcga
      301 ggaagtggcc gacgtgccgt tccgctcgac gaggccgggc gtgatgcacg cctgcggcca
      361 tgacggccac accaccatgc tgctcggcgc ggcgcgctat ctcgccgaga cgcgcagctt
      421 cgacggcacc gcggtgttca tcttccagcc tgccgaggag ggcctcggcg gcgcccgcgc
      481 catgctggcc gacggcctgt tcgagcgctt tccgtgcgac gagatctacg cgctgcacaa
      541 ccttcccgac gggccgcgcg gccgcgtcgc cgtcaaagcg ggcccagcca tggcgggcgc
      601 cgatttcttc gacatccgca tcaccggccg cggtgctcat ggcgcctacc cgaacaaagc
      661 catcgacccg acgatcgtcg cggtgaccct ggcccaggcg atccagacga tcgttagccg
      721 caacgccgac ccgctgcagg cggtcgtcgt ctctatcacg cagatccatg ccggctcggc
      781 ctacaacgtg atcccggaga cggcgcagct gtccggcacg gtgcgcgtgc tcgacgatgg
      841 cgcgcgggcg ctggtgcgcg aacgcgtgca cgcgctcgcg gcggggatcg gcgctgcttt
      901 cggcgccacg gtcgacgtcg acttccgcaa cgtcttcacc gtcctcaaca accacgatga
      961 gcaggccgcg gcgatcggcg caacggccgc ggacctcttc gggtcggaca acgtgacctg
     1021 gctcgagcag ccccgcatgg gcagcgagga tttcgccgac atgctgcagg tcgtgcccgg
     1081 cgcctatgtg tggctcggtc agacgcccgg cccgggcctg cacaatccgg cctaccagtt
     1141 cgacgacgcc atcctgccgc tcggcgccgc gcttctggcc cgcatggtcg agacacgctc
     1201 ggccggctga cccccatgat ctgcgctggc cgcctttcgc gatgagccgg gagatgcagt
     1261 tcgccctgtc cgacgagcag cgcgccatcc gcgacatggc gcagggcttc gccgccgaga
     1321 agctggccgg caatgctctc gcgtgggacc agcaaaagat ctttccggtc gacgtgatgc
     1381 gcgaggcggc ggcgctcggc atgggcggca tctatgtgcg cgacgacgtc ggcgggtcgg
     1441 gcatgacgcg gctcgacgcg gcgctgatct tcgaggccct ggcgacgggt tgcccgacgg
     1501 tcgcggccta catctcgatc cacaacatgg tcgcctggat gatcgacgtc ttcggctcgg
     1561 acgcgcagcg ccaggcctgg ctgccgagcc tgtgcacgat ggatcgtctc ggcagctatt
     1621 gcctgacgga gccgggctcc ggctcggacg cggccgcgct ggtgacgcgc gcggtgcgcg
     1681 acagcgacgt gtatgtggtc gacggcgtca agcagttcat ctcgggcgcc ggcgtgtcgg
     1741 acctctacgt cacgatggtg cgcaccggcg gctccggcgc cgacgggatt tcgacgctcg
     1801 tgatcgagaa gaacaccccc gggctctcgt tcggagccca ggagcggaag atgggctgga
     1861 acgcccagcc cacaaggcaa gtgattttcg agcgctgccg cgtgccggtc gccaaccggc
     1921 tcggccccga aggcgtcgga ttcaggatgg cgatgcgcgg cctcgacggc gggcggctca
     1981 acatcggcgc ctgctcgctc ggcggcgcgc aggcggcgct cgacaagtcg ctggcctaca
     2041 cgaccgatcg caaggccttt ggccagcgcc tgtccgattt ccaggcgctg cagttcaggc
     2101 tggccgacat ggcgacggag ctcgaatgcg cgcgcacctt cctgtggcgt gccgcagccg
     2161 cgctcgacgc cggcgatcct gaggcgacgc ggctctgcgc catggcgaag cgcgtcgcca
     2221 ccgataccgg cttcacggtc gccaacgacg ccctgcagct gcacgggggc tacggctacc
     2281 ttgccgacta cggaatcgag aagatcgtgc gcgacctgcg cgtgcaccag atcctggaag
     2341 gcacgaacga gatcatgcgc gtcatcatcg cgcgcgggct cgtcgggcga gaccaatgac
     2401 gcaaacgcgc gggatcgccg ctacggagag cgacgaggtc ctcgtgcgcc gcgacggcgc
     2461 gctcggccat atccgcctga accgcccgcg cgccctcaac agcctgacgc tggacatggt
     2521 gcgggcgata tcgggcgcgc tcgatgcgtt cgaagccgat gaccgggttg ccgccgtcct
     2581 ggtggatgga gccggcgaac gcgggttgtg cgccggcggc gacatccgcg cgatttacga
     2641 cagcgcgcgc aggcgcgacg gccatgcgca acgcttcctc agggaagaat acgcgctcaa
     2701 cgcccgcatc gcgtcgtatc ccaagcccta cgtcgccatc atggacggga tcacgatggg
     2761 cggcggcgtc ggcatctcgg cgcatggcag ccaccgtgtg gggacggagc ggacgcggtt
     2821 cgccctgccc gaagtcgcga tcggcttctt ccccgacgtg ggcgcgacgt ggctgctgcc
     2881 gcgggcgccg ggcgagaccg gcacctggat cgccctgacg ggcgagtccc tcggcccgca
     2941 cgacacgatc cacgcggggc tggccgatgt gttcgtcggg tcggcggacc tgccggcggt
     3001 gcacgagggg ctcgccgcgc tcgccccgtc gacgacggcc gcggacgtgt ccgcgacgct
     3061 gaggcgcctg tcttcgccgc cggaggccgg gcgcctggcg ggcgaccgtc cggcgatcga
     3121 ccggctgatg gccttcgccg acgccgcggc gatccggcgc gccctcgaaa acgacggctc
     3181 cgcgttcgcg cagggcgtgc tgcacgccat ggcggcggct tcgccgacga gcctcgcgct
     3241 gaccgtccgt ctgctgcgcc tcggccgcgc agcggccagc ctcgaggact gcctcatcag
     3301 cgaataccgc gccgcctgcc gcgccctgca cggccacgat ttcctcgaag gcattcgtgc
     3361 cgcggtgatc gacaaggaca ggcagccgcg ctggtcgccg gcgcggctcg acgacatcgg
     3421 cgagggcctc atcggtgagc atctcgcgcc ggccgacggg gaggagacga tcttcccggg
     3481 caaaggatga tccggcaaag tgggcccgct gaaaagctct cggagatgag ccatgggaga
     3541 gacgatcgcc ttcatcggcc tcggcaacat gggcggaccg atgacggcca acctcgtcaa
     3601 gagcgggcgg cgggtcgtcg gcttcgacat gagcgccgca tgccgcgacg cggcgcaggg
     3661 gaacggggtg gcgatcgccg gcagcgctgc cgcggcggtg gccgacgccg acgtcgtgat
     3721 caccatgctg ccggcgggcc agcacgtcct gtccgtgtgg gccgagacgg tcgcagccgc
     3781 gccggccaag accctgttca tcgactgctc gaccatcgac atcgagagcg cgcgcaaagc
     3841 tcatgcgctg gcggcggagc acgcgcgtcc cgcgctcgac gcgcccgtct cgggcggggt
     3901 cgccggggcg accgcggcga ccctcacctt catggcgggc ggaagccggg aggcgttcgc
     3961 gcaaggcgag ccgatcctgg ccgccatggg caagcgggtc gtccattgcg gcgaggccgg
     4021 cgccggccag gccgc
//
LOCUS       DATAIQ010000806         3201 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_203452, whole genome shotgun sequence.
ACCESSION   DATAIQ010000806 DATAIQ010000000
VERSION     DATAIQ010000806.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3201)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3201)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3201
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_203452"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..207
                     /locus_tag="VHN20_13240"
     CDS             <1..207
                     /locus_tag="VHN20_13240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010683082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726778.1"
                     /translation="IPEKVEPQDPGTTGSTGQTLSDKLQQNEGVLKPPATGDTEAVVP
                     PPHMPSMPVIKPPGTSPSDPVQPK"
     gene            complement(337..1119)
                     /locus_tag="VHN20_13245"
     CDS             complement(337..1119)
                     /locus_tag="VHN20_13245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007626607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX2726779.1"
                     /translation="MDLGLAGKRALVLSSSRGLGLGIAQSLAAEGADVMLTARNAERL
                     KAAAEAINSQGKGRAHYFASDLAGRVEFVYKAAVDALGQIDILVANTGGPPARTALLV
                     KPEEWTPQFQAMVVPVFQMASLVLPPMRERGWGRLVTIASSGVVQPIPNLAISNALRS
                     SIVGWSKTLASEVAKDGVTVNLVLPGRIETDRTGELDAANAQAQGKSVDEIATAMRAQ
                     IPAGRYGRVQEFADTVCFLASQRASYITGSMIRVDGGAIRSI"
     gene            complement(1197..1685)
                     /locus_tag="VHN20_13250"
     CDS             complement(1197..1685)
                     /locus_tag="VHN20_13250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family acetyltransferase"
                     /protein_id="HEX2726780.1"
                     /translation="MQWLSRAVFGLASLVLMGLALGLIVQGVYYPLTAVLQPGSQGKI
                     AFLSGVGYVIIAIAVFDVAKFLIEEEVVLGRERQSVAETRRSLTKFVSTIAMAALLEA
                     LVTVFRVSSEDPALMLYPTLLLVAGTGLIVGLGLFQRLSATTERQVSARDGAETGDRK
                     AG"
     gene            complement(1754..2884)
                     /locus_tag="VHN20_13255"
     CDS             complement(1754..2884)
                     /locus_tag="VHN20_13255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012334560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726781.1"
                     /translation="MIEALMFFALGFLVAGLIALLIIPAINARAERLARRRLEALFPL
                     SITELTAEKDHLRAEFAVLQRRLERKVEEAQAGKHQDMDELGRRAVRIEALEAELAVR
                     DGRIGAGERDLADVRARVAELDAELLSTKQALAAGQETLVAIETAHRRTLEELANARG
                     ELETTTTALAEARTALAAAMARVAQLESDHADLDSRHRTSLGEIDAKRITISDLETRF
                     GTQKARADELERALGEARTELSAERQRVAELAQSLVGEQSRTGTLEQRIRVLEAERDG
                     RALDAAKAAADATDLRGERDALLARLDERKAAFTAAEEKLAEAQRRIADLETGPHAGA
                     TDEVLRAENAELRQRIEEVAGEIMRVTEATREERPRRSRSTA"
     gene            complement(3101..>3201)
                     /locus_tag="VHN20_13260"
     CDS             complement(3101..>3201)
                     /locus_tag="VHN20_13260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018117279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="EipA family protein"
                     /protein_id="HEX2726782.1"
                     /translation="MVVVPIRTGVGARLGVNVGYLKFTPDPTWNPF"
BASE COUNT          514 a         1086 c         1107 g          494 t
ORIGIN      
        1 attccggaaa aggtggagcc ccaggatccg ggcacgaccg gctccacggg ccagacgctc
       61 agcgacaagc tgcagcagaa cgagggcgtg ctgaagccgc ccgcgaccgg tgacaccgaa
      121 gcggtggtgc cgcccccgca catgcccagc atgccggtca tcaagccgcc gggaacatcg
      181 cccagcgacc cggtccagcc gaaataaatc tcgatgacag catgatccgg cggagtgggg
      241 ctgtagccgg gacccctcag cggacgcggg atgggggtcg gttcatcttg agccgatccc
      301 gctctcgttc taaacgcggc cccacgccgc cagcggtcag atcgaacgaa tagcgccgcc
      361 atcgaccctg atcatgctgc ccgtgatgta gctcgcgcgt tgcgaggcaa ggaagcacac
      421 cgtatcggcg aattcctgga cgcggccgta gcggccggcc gggatctggg cgcgcatggc
      481 ggtcgcgatc tcatccacgc tcttgccctg cgcctgcgcg ttggccgcgt ccagctcgcc
      541 ggtgcggtcc gtctcgatgc ggccgggcag cacgaggttg accgtgaccc catccttggc
      601 gacctcgctc gccagggtct tggaccagcc gacgatcgag gaccgcaagg cattggagat
      661 cgcgaggttg gggatcggct gaacgacgcc ggaggaggcg atcgtcacga gccgtcccca
      721 gccgcgctcg cgcatcggcg gcagcacgag gctggccatc tggaacaccg ggacgaccat
      781 ggcctggaat tgcggcgtcc actcctccgg cttgacgagg agcgcggtcc gggcgggggg
      841 gccgccggta ttggcgacga gaatgtcgat ctggccgagc gcgtcgacgg cggctttgta
      901 gacgaactcg acccggcccg cgaggtcgct cgcaaaataa tgggcgcgcc ccttgccctg
      961 gctattgatc gcttcggcgg cagccttgag gcgctcggcg ttgcgcgccg tcagcatcac
     1021 gtctgcgcct tcggcggcaa gcgactgggc gatgccgagg ccgagcccgc ggctcgaaga
     1081 caacacaagg gcgcgcttgc cggcgagacc gagatccatg atgaactccc agatgacgcg
     1141 tgacgatcgc cgtcacgtcg cgtctgcctt agcggccctt ggggttcgcg ccaaggtcag
     1201 cccgccttcc ggtcgcccgt ctcggccccg tcccgggcgc tgacctgccg ctcggtcgtg
     1261 gcgctgaggc gttgaaacag accgagcccg acgatcagcc cggtgccggc cacgaggagc
     1321 agcgtcgggt aaagcatcaa ggcagggtcc tccgaactga cgcggaacac cgtgacgagc
     1381 gcctcgagaa gagccgccat ggcgatcgtc gagacgaact tcgtgaggct tcggcgggtc
     1441 tccgccacgc tttgacgctc ccgcccgagc accacttctt cttcgatgag gaacttggcg
     1501 acgtcgaaga ccgcgatcgc gatgatgacg tagccgacgc cgctgaggaa cgcgatcttg
     1561 ccctggctgc cgggctgcag cacggccgtc agcggataat agaccccctg cacgatcagc
     1621 ccgagggcca gacccatcag gacgaggctg gccaggccga agacggcacg cgagagccat
     1681 tgcacgggag atcacctcat gaagttaggc cggcagaatc ccgaagtctg tgccgcgccc
     1741 gccggattca cgctcaagcc gtggagcgcg agcgcctcgg ccgctcctcg cgggtcgcct
     1801 ccgtcacccg catgatctcg ccggcgacct cctcgatgcg ctggcgcagc tcggcattct
     1861 cggcgcgcag cacctcgtcc gtcgcgccgg catgaggacc ggtctcgaga tcggcgatgc
     1921 gccgttgcgc ctcggcgagc ttctcctcgg cagcagtgaa ggcggccttg cgctcgtcga
     1981 gccgcgccag cagcgcgtcg cgttcgccgc gcaggtcggt ggcatcggcg gccgccttgg
     2041 cggcgtcgag cgcgcgaccg tcgcgctcgg cctcgagaac ccggatgcgc tgctccagcg
     2101 tgcccgtgcg gctctgttcg ccgacgaggc tttgcgcgag ttcggcgacg cgctggcgct
     2161 cggccgacaa ctcggtgcgc gcttcgccga gcgcacgttc gagctcgtcg gcgcgcgcct
     2221 tctgggtacc aaagcgggtc tcgaggtcgg agatcgtgat gcgtttggca tcgatctcgc
     2281 cgaggctggt ccgatgccgg ctatcgagat ccgcgtggtc ggattcaagt tgcgcgaccc
     2341 ttgccattgc cgcagcaagc gccgtgcgcg cctcggcgag ggcggtcgtg gtggtctcga
     2401 gctcgccgcg ggcgtttgca agctcctcga gcgtgcggcg gtgcgccgtc tcgatcgcga
     2461 ccagcgtctc ctggccggcg gcgagggcct gtttggtgga cagcagttcg gcatcgagct
     2521 cggcgacccg cgcgcgaacg tcggcgaggt ctcgctcgcc tgcgccgatt cggccgtcac
     2581 gcacggcgag ttccgcttca agggcttcga tgcggaccgc acggcggcca agctcgtcca
     2641 tgtcctggtg cttgccggcc tgcgcctcct cgaccttgcg ctccaggcgg cgttgcagaa
     2701 ccgcgaattc ggcgcgcagg tggtccttct cggcggtgag ctcggtgatg gaaagcggaa
     2761 acagcgcctc caggcgccgt cgcgcgagcc gctcggcgcg agcattgatc gccggaatga
     2821 tcaggagcgc gatcaagccc gccacgagga acccgagcgc aaaaaacatc agggcttcaa
     2881 tcacgcgaaa gcgaactccg gtggcgtcag tcggaagcgg ggcaccctgc cacgggggcg
     2941 cgccgctttc cagagtaatc cccgtccggc gaaggcgggc ccggtcgcgt cagcatccgg
     3001 actgggtggg gaacggcgag gtcaattctg cgaccggggt aacctcaccc cggcggcctt
     3061 gcatgacagg gctctcctcg gaagggggaa agacaagctg tcagaacggg ttccaggtcg
     3121 ggtccggcgt gaacttgaga tagccgacat tgaccccgag ccgggcgccg acacccgtgc
     3181 ggatgggcac gaccaccatc t
//
LOCUS       DATAIQ010000807         1500 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_134324, whole genome shotgun sequence.
ACCESSION   DATAIQ010000807 DATAIQ010000000
VERSION     DATAIQ010000807.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1500)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1500)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1500
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_134324"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(142..642)
                     /locus_tag="VHN20_13265"
     CDS             complement(142..642)
                     /locus_tag="VHN20_13265"
                     /inference="COORDINATES: protein motif:HMM:NF015715.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease"
                     /protein_id="HEX2726783.1"
                     /translation="MIGALVLWALAIVLAIWALRRSTAKARVAIATAGERFLEIMPRI
                     ALALMAAGFIGVLVPSEPVARYIGSDSGLLGILIASFVGGFVPGGPILSFPLVVVLYK
                     AGAGIPQLIAFLTAWSVFAFHRVAIYEVNLMGWRFSAVRLISSLVLPPMAGLLSMALS
                     TVLEVH"
     gene            complement(639..1190)
                     /locus_tag="VHN20_13270"
     CDS             complement(639..1190)
                     /locus_tag="VHN20_13270"
                     /inference="COORDINATES: protein motif:HMM:NF015715.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease"
                     /protein_id="HEX2726784.1"
                     /translation="MAAGARLKKIFDRSFWIVAFLTALSGVACYWVRGAELFFESFKT
                     DLELVGMITPRLGAALLIAASIQVLLPREKVARWLGDQAGLKGMLIATGAGMVTPGGP
                     MTSFPVVNALHEAGTGRRALVAYLTSWSTQGFQRILMWELPMMGLEFATFRFIVSLPL
                     PIVAGMISRYVPIDTDPVDAETR"
BASE COUNT          294 a          498 c          512 g          196 t
ORIGIN      
        1 gttgatcgga tgcggcaggg ggaccggcgc cgtcgtacac ggtcgcagcg tcccttcagc
       61 ggctgaagaa cgtgtccgca cctatacggg acaacgcgcg gcagacaaat cctttcctgc
      121 gccccgccgc ccggaccagg ctcaatgcac ctcgaggacc gtcgacagcg ccatcgacag
      181 gaggccggcc atgggcggca gcaccagcga cgagatcagg cgcacggcgc tgaagcgcca
      241 gcccatcagg ttgacctcgt agatggcgac ccgatggaag gcgaagaccg accaggcggt
      301 caggaaggcg atcagctggg ggatgccggc gcccgccttg tagagaacga cgaccagcgg
      361 gaacgagagg atcgggccac cgggcacgaa gccgccaacg aaggaggcga tcaggatgcc
      421 gaggaggccg ctgtcagacc cgatgtagcg cgccaccggc tcgctcggca cgagcacgcc
      481 gatgaagccg gccgccatca acgcgagggc gatgcgcggc atgatctcga gaaagcgctc
      541 tccggcggtc gcgatggcca ctcgcgcctt cgcggtgctg cgccgcaagg cccagatcgc
      601 caggacgatg gcgagcgccc atagaaccag cgcgccgatc atcgcgtctc cgcgtcgacg
      661 gggtcggtgt cgatcggaac gtagcgcgag atcatgccgg cgacgatcgg cagcggcagc
      721 gagacgatga agcggaaggt cgcgaattcc agccccatca tcggcagctc ccacatgagg
      781 atgcgctgaa atccctgggt cgaccacgag gtgagataag cgaccagcgc gcgccggccg
      841 gtgccggcct cgtgcagcgc gttgacgacg ggaaacgagg tcatcggccc gccgggggtc
      901 accatgccgg ctcccgtggc gatgagcatg cccttcaatc cggcctggtc gccgagccac
      961 cttgccacct tttcgcgcgg cagcagcacc tggatggacg cggcgatgag cagggccgct
     1021 cccagccgcg gcgtgatcat gccgacgagc tcgaggtcgg tcttgaagct ctcgaagaaa
     1081 agctccgccc ccctcaccca gtaacaggcc acgccgctca gcgccgtcag gaaggcgacg
     1141 atccagaagg accgatcgaa aatttttttc agtcgggcgc cggcagccat gtcgtgtgcg
     1201 tcgtaagtcc ccgccccgga attcgcgcaa cgaagcggac gctacatggc ttcgcatcat
     1261 cagcacgcgg ccggcgtagc catgcggacc tgccgcaagc cgccgcgatg gtcgtcgagc
     1321 cgcagggcct ccggcgtgac gatcgacggc gccgctgtta gcagcgccag gcaacaaacg
     1381 cgagtcgcaa ggtcacgccc gcaaggctgt cagcatgacc tcgatgtagt cgcggccgct
     1441 ggcaatcacg agcatcttgg cgaaggggcg catgtggccg agggtgcggg acaggtcctc
//
LOCUS       DATAIQ010000808         3515 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_411117, whole genome shotgun sequence.
ACCESSION   DATAIQ010000808 DATAIQ010000000
VERSION     DATAIQ010000808.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3515)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3515)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3515
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_411117"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..187)
                     /locus_tag="VHN20_13275"
     CDS             complement(<1..187)
                     /locus_tag="VHN20_13275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX2726785.1"
                     /translation="MAETTAPRVLSGKRGLILGVANNRSIAWGIAKAAHAHGAELAFT
                     YQGDALKKRVEPLAGELN"
     gene            complement(262..1176)
                     /locus_tag="VHN20_13280"
     CDS             complement(262..1176)
                     /locus_tag="VHN20_13280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="J domain-containing protein"
                     /protein_id="HEX2726786.1"
                     /translation="MRDPYVVLEVPRSASEADIKKAYRKLAKSYHPDRNKNDPKAKDK
                     FAELNSAYEILGDATKRAQFDRGEIDALGKPRFQGFGAGGTREGFEGFQFGFGGGGPF
                     GRRKSARGAAGADDDVFSQLFGEAFRSGERGAQPRPGRGADVSAKLTVTLEDIVNETK
                     KRVVLGGREVEVTIPKGVADGQTIRLRGLGEASSGGTGDALLTIHIAPHERFTVEGDN
                     IRVHQPVDLEDAVLGGKVRVPTLSGQVEMTIPPMTSSGRTFRLRGKGLPGKSGMGDLL
                     VAIEIRLPESADETLLDYARKRRAARVE"
     gene            complement(1305..1706)
                     /locus_tag="VHN20_13285"
     CDS             complement(1305..1706)
                     /locus_tag="VHN20_13285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RT0821/Lpp0805 family surface protein"
                     /protein_id="HEX2726787.1"
                     /translation="MALALPAGGCGISYPLTSLVPETETTGSTKPKVVSPLSAELGEE
                     DWRRARGALTIALDPQGNGSSVAWDNPDSLMKGNFAPVGQPFVKTDEICRAFLASVTG
                     QSGSSSLQGTACRPSGGEWVIKDVKPWRKPT"
     gene            1809..2450
                     /gene="pdxH"
                     /locus_tag="VHN20_13290"
     CDS             1809..2450
                     /gene="pdxH"
                     /locus_tag="VHN20_13290"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018698594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004733 - pyridoxamine phosphate oxidase
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase"
                     /protein_id="HEX2726788.1"
                     /translation="MFERTTDKDQTPDPLKSGDFTESGEPWALFERWFAEAAQGEPND
                     PNAMALATADAGGMPNVRMVLLKGVDADGFVFYTNVDSAKGTELTANPKGALLFHWKS
                     LRRQVRARGTVTRVSDAEADDYFATRPRDSRIGAWASQQSRPLESRFAFEKAIALYAA
                     RYAVGDVPRPPYWTGFRLAPLSIEFWQDRPFRLHDRVVFTRSEGGWAKTRLYP"
     gene            2529..3251
                     /locus_tag="VHN20_13295"
     CDS             2529..3251
                     /locus_tag="VHN20_13295"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018043428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX2726789.1"
                     /translation="MLLTGASRGIGHATVKRFSAAGWRVITCSRHAFPENCPWEMGPE
                     DHLQVDLANPRDTVRAIDEVKNRLEPEGGVLHALVNNAGISPKGTGGSRLGALKTAFE
                     DWQHVFQVNFFAPILLARGLVEELALAKGSVVNVTSIAGSKVHPFAGAAYATSKAALA
                     ALTREMAEDFGPLGVRVNAISPGEIDTAILSPGTDKLVEQIPLRRLGTPDEVAKAIYF
                     LCTEASSYVNGAELHINGGQHV"
BASE COUNT          546 a         1219 c         1177 g          573 t
ORIGIN      
        1 cgttcagctc gccggccaag ggctcaaccc gcttcttcag ggcgtccccc tgatacgtga
       61 aggcaagctc ggccccgtgc gcgtgcgccg ccttggcgat gccccaggcg atcgagcggt
      121 tgttggcgac gcccaggatc aagccgcgct tacctgaaag aacgcgtggc gccgtcgtct
      181 ccgccataaa gcaccttgag tgttggcccg gtggaatgcc gcgcctcttt agccgaggcg
      241 ggcacgtgac ggaagcccgc tttactccac ccgtgccgcc cgccgcttgc gcgcgtaatc
      301 gagcagggtc tcgtcggcgc tctcgggcag gcggatctcg atggcgacga gcaggtcgcc
      361 catgcccgac ttgcccggca gccccttgcc gcgcaggcgg aacgtgcggc ccgagctggt
      421 catcggcgga atggtcattt cgacctgccc ggacaatgtc ggcacgcgca ccttgccgcc
      481 caggaccgcg tcctcgagat cgacgggctg gtgcacccgg atgttgtcgc cctcgacggt
      541 gaaacgctcg tgcggcgcga tatggatggt cagcagcgcg tcgccggtgc cgccggaact
      601 cgcctcgccg agcccgcgca ggcggatcgt ctggccgtcg gcgacgcctt tgggaatcgt
      661 gacctcgact tcacggccgc cgagcacgac gcgcttcttg gtttcgttga cgatgtcctc
      721 gagggtcacc gtcagcttgg ccgagacgtc ggcgccgcgg cccggccgcg gctgggcgcc
      781 gcgctcgccg gagcggaacg cctcgccgaa cagctgcgag aaaacgtcat cgtcggcgcc
      841 ggcggcgccg cgcgccgact tgcgccggcc gaacggcccg ccgccgccga agccgaactg
      901 gaagccttca aatccctcgc gcgttccgcc cgccccaaag ccctggaagc gcggcttgcc
      961 cagggcgtcg atctcaccgc ggtcgaactg cgcccgtttg gtcgcgtcgc cgaggatctc
     1021 gtaggcgctg ttcagctcgg cgaacttgtc cttcgccttc gggtcgttct tgttgcggtc
     1081 cgggtgatag ctcttggcga gcttgcggta cgccttcttg atgtccgcct cgctcgccga
     1141 gcgcggaact tccaagacga cataggggtc gcgcatcatc cctccgaacg acttcgatcg
     1201 cgagacttcc ctcgcaataa cgcttccccg gatatgggaa aattgttgct tctttgcaac
     1261 ggcacccgtc ggggcgcggc aggaatatct tgccggaagg accgctaggt cggcttgcgc
     1321 cagggcttca cgtccttgat cacccattcg ccgcccgacg gccggcaggc ggtgccttgc
     1381 agggatgagc tgccggactg acccgtgacg ctcgccagga aggcccggca gatctcgtcg
     1441 gtcttgacga agggctggcc gacgggcgca aagttgccct tcatcaggct gtccgggttg
     1501 tcccaggcga ccgacgagcc gttgccttgc gggtcgagcg cgatggtcag ggcgccgcgc
     1561 gcccggcgcc agtcctcctc gccgagctcg gccgacaagg gcgagacgac cttcggcttg
     1621 gtcgagcccg tcgtctcggt ctcggggacg agagaggtga gggggtagga gatgccgcag
     1681 ccgccggccg gcaaggcgag ggccatggcc acggccaagc cagcccaggc acgcgccgga
     1741 gtttcgctcc ggtcggcaac tgacctataa acgcagggcg ctacgatcgc ggtcacgagg
     1801 acctacactt gttcgagaga acaacggaca aagatcaaac cccggatccg ttaaaatccg
     1861 gtgacttcac cgaatcgggc gagccctggg cgctgttcga gcgctggttc gccgaggcgg
     1921 cgcagggcga gccgaacgac cccaacgcga tggcgctggc gacggccgac gccggcggca
     1981 tgccgaacgt gcgcatggtc ctgctcaagg gcgtcgatgc ggacggcttc gtgttctaca
     2041 ccaacgtcga ttcggccaag ggcaccgagc tcacggccaa tcccaaaggc gccctgctgt
     2101 tccactggaa gagcttgcgc cgccaggtgc gcgcccgcgg cacggtcacg cgggtcagcg
     2161 acgccgaggc cgacgattat ttcgccacgc gtccgcgcga cagccgcatc ggcgcctggg
     2221 cgagccagca gtcgcggccc ctcgagagcc gcttcgcctt cgagaaggcc atcgccctct
     2281 acgccgcgcg ctacgccgtg ggcgacgtcc cgcgcccgcc ctactggaca gggttccgcc
     2341 tggcgccgct gtcgatcgag ttctggcagg accggccgtt ccgcctgcac gaccgcgtcg
     2401 tgtttacccg cagcgaaggc ggctgggcca agacgcggct ttatccgtga caccgggggg
     2461 ccggcaccct agatgaaggc gagcatcagg gggatcgcgt gcctcaaacg aaccagagcc
     2521 gtcgggtcat gctgctgacc ggcgcgagcc gtggcatcgg ccatgcgacc gtgaagcgtt
     2581 tctcagccgc cggctggcgg gtgatcacgt gctcgcggca cgcctttccg gagaattgcc
     2641 cgtgggagat gggcccggag gatcatcttc aggtcgacct cgccaacccg cgcgacaccg
     2701 tgcgcgccat cgatgaggtc aagaaccgcc tcgaacccga gggaggcgtc ctgcacgccc
     2761 tcgtcaacaa tgccggcatc tcgccgaagg ggacgggcgg ctcccggctg ggtgcgctca
     2821 agaccgcctt cgaggattgg cagcacgtct tccaggtcaa ctttttcgcg ccgatcctgc
     2881 tcgctcgcgg gctcgtcgag gagctggcgc tcgccaaagg atcggtcgtc aacgtgacct
     2941 cgatcgccgg ctcgaaggtg catcctttcg cgggtgccgc ctatgccacg tcgaaggcgg
     3001 ctctggccgc cctgacccgc gagatggctg aggatttcgg gccgctcggc gtacgcgtga
     3061 acgccatctc gcccggcgag atcgacacgg ccatcctgtc tcccggcacc gacaagctgg
     3121 tcgagcagat tccgctgcgc cgcctcggaa cgcccgacga ggtcgccaag gcgatctact
     3181 tcctgtgcac cgaagcctcg tcctacgtga acggggccga actgcacatc aacggcgggc
     3241 agcatgtgta acgaccgtgc cggcggcaac gcgctcgacg agtccggaac cggcggcgct
     3301 cgctcgtaat ctgcgcgaaa ccattttcga tcatcagcat ggccgtgcat gagcctggtt
     3361 cgaacaaaag gcgccaaccc tcccgttgaa tcctctcttc cgggggaggc cgccgcgtcc
     3421 gagcgcctgt atccggcgcg cccgctgctg gccgcctccg tggcggtgct gcgcgacgcg
     3481 cgcgtgctcg tggcagcgcg gggcaggggg ctgat
//
LOCUS       DATAIQ010000809         1984 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_341382, whole genome shotgun sequence.
ACCESSION   DATAIQ010000809 DATAIQ010000000
VERSION     DATAIQ010000809.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1984)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1984)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1984
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_341382"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1762
                     /locus_tag="VHN20_13300"
     CDS             <1..1762
                     /locus_tag="VHN20_13300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015823400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HEX2726790.1"
                     /translation="NVGFNRVVDFMRDHPTWPVGALLRRRAEENLLLDRKPAAVVRAY
                     FATQRPVTPSGKLALALAFKADGLDRDAAALIRETWRRDSLGREFESKILASFPDVLT
                     QADHRFRMERMLFKESWQSALRAAGHAGKDYVALAKARMAVAGEGGNAVKLLDAVPAA
                     LRSDTSYVFSRAQQLRRKKNAAEAAKVIAGVPRDPAILADGDEWWTERRLIARKLLDD
                     GDAKTAYEVVRDHAAETSALRIEAEFHAGWIALRFLNDAALASGHFDSAAAIAETPIS
                     VARAAYWQGRAAEAAGQQEAAQRHYERAAQQAITYYGQLASAKLGRETLALRSADGGP
                     ASREAFHNLTAVQALKLLNEAGVRDLAMPLYIDLAQRLGDPAQLHALGDLALEQRDAK
                     TLLSIGKTAVQRGMPLDLHAFPTIGIPAYDPVGDRVEKAMVYAIARQESMFDAKAQSH
                     AGARGLMQLMPATARRTAKRFGVDFDVNKLISDASYNAKIGAAHLGELMDDWKGSYIL
                     AFASYNAGGGNVKKWIDAYGDPRSPQVDAVDWVERIPFSETRNYVQRVMENLQVYRRR
                     LSERSVLLIDEDLRGKRAVQ"
BASE COUNT          316 a          716 c          667 g          285 t
ORIGIN      
        1 caatgtcggg ttcaaccggg tggtcgactt catgcgcgat catccgacct ggccggttgg
       61 cgcgctgctc cgccgccggg ccgaagagaa tctcctgctc gaccgcaagc ccgcggccgt
      121 cgtgcgcgcc tatttcgcga cgcagcggcc ggtcacgccg tcgggcaagc tggccctcgc
      181 cctcgccttc aaggccgacg ggctcgaccg cgacgcggcg gcgctgatcc gggagacgtg
      241 gcggcgcgac tcgctcggac gcgagttcga aagcaagatc ctggcgagct tcccggacgt
      301 gctgacgcag gcggatcacc gcttccgcat ggagcgcatg ctgttcaagg agagctggca
      361 atcggccctg cgcgccgccg gccatgccgg caaggattac gtcgcgctcg ccaaggcgcg
      421 catggcggtc gccggcgaag gcggcaatgc cgtcaagctg ctcgacgccg tgccggccgc
      481 ccttcgctcc gacacgtcct acgtgttctc gcgcgcgcag cagctgcgcc gcaagaagaa
      541 cgcggccgag gccgccaagg tcatcgccgg cgtcccgcgc gatccggcga tcctcgccga
      601 cggcgacgaa tggtggaccg agcgccggct gatcgcgcgc aagctgctcg acgacggcga
      661 cgccaagacc gcctacgagg tcgtgcgcga ccacgccgcc gagacctcgg cgctgcgcat
      721 cgaggccgag ttccatgccg gctggatcgc cctgcgcttc ctcaacgatg cggccctggc
      781 ctcaggccat ttcgattccg ccgcggcgat cgccgagacg ccgatctcgg tcgcccgcgc
      841 tgcctattgg caggggcgcg cggcggaagc cgcggggcag caggaggcgg cgcagcggca
      901 ttacgagcgc gccgcgcagc aggcgatcac ctattacggg cagctcgcga gcgccaagct
      961 cgggcgcgag acgctggcgc tgcgctctgc cgacggcggc cctgcgagcc gcgaggcgtt
     1021 ccacaacctc accgccgtgc aggcgctcaa gctcctgaac gaggcgggcg tgcgcgatct
     1081 cgccatgccg ctctacatcg acctggcgca gcgcctcggc gacccggcgc agctgcacgc
     1141 gctcggcgac ctcgccctcg agcagcgcga cgccaagacc ctcctgtcga tcggcaagac
     1201 cgccgtgcag cgcggcatgc cgctcgacct gcacgccttc cccaccatcg gcatcccggc
     1261 ctacgacccg gtcggcgacc gcgtcgagaa ggcgatggtc tatgccatcg cgcggcagga
     1321 gagcatgttc gatgcgaaag cgcagtcgca cgccggggcg cgcgggctca tgcagctgat
     1381 gcccgctacc gcgcggcgta cggcaaagcg cttcggcgtg gacttcgacg tcaacaagct
     1441 gatcagcgac gcgtcctaca atgccaagat cggcgcggcg catctcggcg agctgatgga
     1501 cgactggaaa ggctcctaca tcctcgcctt tgcgtcgtac aatgccggcg gcggcaacgt
     1561 gaagaaatgg atcgacgcgt atggcgaccc gcgctcgccg caggtcgacg cggtcgactg
     1621 ggtggaacgc atcccgttct cggaaacgcg caactacgtc cagcgtgtca tggagaacct
     1681 gcaggtctat cgccggcgcc tcagcgagcg cagcgtgctc ctgatcgacg aagacttgcg
     1741 cggcaagcgg gccgtccagt aggcgcgcgc ccatgaccat cgatgccggc gtgttcacgc
     1801 agggctgaag caagcacagg tctcgatccg gccctatgac cacccagcca tatgacgacc
     1861 tgttcgtgtc ggccagcgac ggcctgcgcc tctacgcgcg cctctacggt cggcgcgcgg
     1921 aaaacgcctt cccggtggtc tgcctgcccg gcctcgcgcg cacgtcggcg gattttcatg
     1981 acgt
//
LOCUS       DATAIQ010000810         1762 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_456677, whole genome shotgun sequence.
ACCESSION   DATAIQ010000810 DATAIQ010000000
VERSION     DATAIQ010000810.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1762)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1762)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1762
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_456677"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..923)
                     /gene="solA"
                     /locus_tag="VHN20_13305"
     CDS             complement(<1..923)
                     /gene="solA"
                     /locus_tag="VHN20_13305"
                     /EC_number="1.5.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012634401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050131 - N-methyl-L-amino-acid oxidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-methyl-L-tryptophan oxidase"
                     /protein_id="HEX2726791.1"
                     /translation="MQHFDTIVIGVGAMGSAALWQLARRGQRVLGLERFDLGHAMGSS
                     HGLNRIIRLAYFEHPNYVPLLRRAYELWRETEKLAGEQLLFVTGGLDAGHPEGRVVKG
                     SLKACREHALSHELLTSAELTRRFPGYRLPADYVGVYQPDGGFVASERAIMAHATLAV
                     AAGAEIHAREKVVAVEPKSGRAVVVTDRARYEAGRVIVSAGAWVSDLLPDLAGKAVPE
                     RQVLGWFQPKKPELFAPAVFPVSNLLSDIGHFYQFPSWGIPGFKIGLYNHLHEHGHAD
                     RLSREPTPADEEALRRAVRAFFPDADGPTLRL"
     gene            complement(1065..>1762)
                     /locus_tag="VHN20_13310"
     CDS             complement(1065..>1762)
                     /locus_tag="VHN20_13310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="sugar nucleotide-binding protein"
                     /protein_id="HEX2726792.1"
                     /translation="AVINAAGYVKVQDAAREPDLCMRENARAAEVLASACAARGLPFV
                     TFSSDLVFDGRLGRAYVETDHPNPRCVYGESKALAERAVLAACPEALVVRTSAFFGPW
                     DRYNFVFDALQAMAAGKAFEASSDVVSPTYVPDLVHVVLDLLIDGARGTWHLTSGTAL
                     SWHELAAAAAARAGLDGSRAYRRAAGEAVRHTALTSERGILLPPLDSALDRFLLDCAC
                     PWRPGEQLAAAAE"
BASE COUNT          270 a          613 c          628 g          251 t
ORIGIN      
        1 aggcgcagcg tcgggccgtc ggcgtcgggg aagaaggcgc gcaccgcgcg gcgcagggcc
       61 tcctcgtcgg cgggcgtcgg ctcgcgcgag agccggtcgg cgtgcccgtg ctcgtgcaga
      121 tgattgtaga gcccgatctt gaagccggga atgccccaag acgggaactg gtagaaatgg
      181 ccgatgtcgc tgaggaggtt cgagaccggg aagacggccg gcgcaaacag ctccggtttc
      241 ttcggctgga accagccgag cacctgccgt tccggcacgg ccttgccggc gaggtcgggg
      301 agcaggtcgg acacccaggc gcccgccgac acgatcacgc gcccggcctc gtagcgcgcg
      361 cggtcggtga ccacgacggc gcggccgctt ttcggctcga cggcaaccac cttttcgcgc
      421 gcatggatct cggcgcccgc ggccaccgcc agcgtcgcat gcgccatgat cgcccgttcg
      481 gacgcgacga agccgccgtc cggctgatag acgccgacgt agtccgcggg cagccgatac
      541 cccggaaagc ggcgggtcag ttcggcgctc gtcagcagct cgtgcgacag cgcgtgctcg
      601 cggcaggctt tcagcgagcc cttgacgacg cggccttccg gatggccggc gtcgaggccg
      661 cctgtcacga acaggagctg ctcgccggcg agcttttccg tctcgcgcca cagctcgtag
      721 gcgcggcgca ggagcggcac gtagttggga tgctcgaaat aggcgagccg gatgatccgg
      781 ttgaggccgt gcgacgagcc catggcgtgg ccgagatcga agcgctcgag gccgagcacg
      841 cgctgccccc tgcgggccag ctgccacaga gccgccgagc ccatggcgcc gacgccgatc
      901 acgatcgtgt cgaaatgctg catgccccat cgtaagcgga ccgcggcggc cctgccaact
      961 ccggatgaaa ggcggcttgc agcgctcgcc cttcctcgat cgggcgcgcg ggctcgatgc
     1021 gagctgcaga tgagctcccc ttgcctgctc ccgtcgctgc agggctactc cgccgcagcg
     1081 gcgagttgtt cgcctggcct ccagggacat gcgcagtcga gcaggaagcg atcgagcgca
     1141 ctgtccaatg gcggcagcag gatcccgcgc tcggacgtca gtgccgtgtg gcgcaccgcc
     1201 tccccggcgg cgcgccgata ggcccggctc ccgtccagcc ctgcgcgcgc cgcagccgcg
     1261 gccgcaagct catgccacga caacgcagtg ccgctggtga ggtgccaggt tccgcgggcg
     1321 ccgtcgatca gaaggtcgag cacgacgtgg acgaggtcgg gaacgtaagt cggcgagacg
     1381 acgtcgctgc ttgcctcgaa tgccttgccg gccgccatgg cctgcagcgc gtcgaagacg
     1441 aagttgtagc ggtcccatgg gccgaagaag gcgctcgtgc gcaccacgag cgcttccgga
     1501 cacgccgcga gcacggcccg ttcggccagc gccttgctct ctccatagac gcagcgcggg
     1561 ttcggatggt cggtctcgac atatgcacgg ccgagccggc cgtcgaacac gaggtcgctc
     1621 gagaatgtga cgaacggcag gcctcgcgcg gcgcatgcgc tcgccaggac ctccgcggcc
     1681 cgcgcgttct cgcgcatgca caggtcgggc tcgcgggccg cgtcttggac cttgacgtag
     1741 ccggccgcgt tgatgacggc cc
//
LOCUS       DATAIQ010000811         2949 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_41669, whole genome shotgun sequence.
ACCESSION   DATAIQ010000811 DATAIQ010000000
VERSION     DATAIQ010000811.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2949)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2949)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2949
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_41669"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1146)
                     /locus_tag="VHN20_13315"
     CDS             complement(<1..1146)
                     /locus_tag="VHN20_13315"
                     /EC_number="2.6.1.83"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015932449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LL-diaminopimelate aminotransferase"
                     /protein_id="HEX2726793.1"
                     /translation="MSDFHRIKRLPPYVFEQVNRIKAAARAGGADIIDLGMGNPDLPA
                     PPHVVAKLCETAGKPRTDRYSASKGIAGLRRAQAGYYERRFGVKLNPETQVVATLGSK
                     EGFANMAQAITAPGDVVLVPNPSYPIHAFGFLMAGGVIRSVPCEPTPAFFPALERAVD
                     YSIPKPIAIVVCYPSNPTACVASLDFYRDLVAFAKKHDLILLSDLAYAEVYFDGEPPP
                     SVLQVPGAMDVTVEFTSMSKTYSMAGWRIGFAVGNERLLAALARVKSYLDYGAFTPVQ
                     VAATAALNGPDDCVREMRAIYTRRRDVLVDSFAKAGWPIPSPSASMFAWVPIPEKFRG
                     LGSLEFSKLLVENPGRPAPRRRRPAVCRDGHRPGHHRARRRPRRPPGR"
     gene            complement(1238..1597)
                     /locus_tag="VHN20_13320"
     CDS             complement(1238..1597)
                     /locus_tag="VHN20_13320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726794.1"
                     /translation="MKRRAHRTWLDLGAAAALLALAACSSDTNPVRDIALSTGVSTPP
                     AKSADFVERSRPDSLDYQPVGVLPPNRAKAKTADEVKAVEAEMDQARAQNETKATSAR
                     QLGATPAPSPGNAPRTP"
     gene            1878..>2949
                     /locus_tag="VHN20_13325"
     CDS             1878..>2949
                     /locus_tag="VHN20_13325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020185619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I poly(R)-hydroxyalkanoic acid synthase"
                     /protein_id="HEX2726795.1"
                     /translation="MAQFVEEAGKATAAYLKPVEDGRAPGGGLADEVGEIVKTLGHVA
                     ENWFTDPQKAIEAQTRLGSSFLSLWAGTLKRMQGQEAQPVAVPDPKDNRFRDPEWTDN
                     PVFDFLKQAYLVTTRWAEDLVEDAEGLDEQTKRKARFYVRQLASALSPSNFVATNPEL
                     IRETLKQSGANLVRGMRMLAEDIEAGGGEVKLRQTDPSRFEVGVNVADAPGKVIYRND
                     LIELIQYAPTTETVLKRPLLIVPPWINKYYILDLNKEKSFIRWAVGQGLTVFVISWVN
                     PDERHAGKGFAEYMREGIFAALVAIKEATRERQVTAIGYCVGGTLLASALAYMAAMGD
                     DRIQSATFFTAQVDFTHAGDLKV"
BASE COUNT          475 a          949 c         1069 g          456 t
ORIGIN      
        1 gcggcctgga gggcggcgcg ggcggcggcg agctcggtga tgtcctgggc gatgcccatc
       61 ccggcaaacc gctgggcggc ggcgccgcgg agcgggacga cctggattct cgaccaggag
      121 cttcgagaac tcgaggctgc cgagaccccg gaatttctcc gggatcggca cccacgcgaa
      181 catggacgcg ctcgggctcg ggatcggcca gccggccttg gcgaaggaat cgacgagcac
      241 gtcgcgccgc cgcgtgtaga tggcgcgcat ctcgcggacg cagtcgtcgg ggccgttcag
      301 cgccgcggtc gccgccactt gcaccggcgt gaaggcgccg taatcgaggt acgacttgac
      361 gcgcgccagc gccgccagca gccgctcgtt gccgaccgcg aagccgatgc gccagccggc
      421 catcgaatag gtcttggaca tcgaggtgaa ctcgaccgtc acatccatgg cgccgggcac
      481 ctgcagcacg gacggcggcg gctcgccgtc gaaatagacc tcggcgtaag cgaggtcgga
      541 gagcaggatc aggtcgtgct tcttcgcgaa ggcgacgagg tcgcggtaga agtcgagcga
      601 ggcgacgcac gcggtcgggt tcgagggata gcagacgacg atggcgatcg gcttcgggat
      661 cgaatagtcg acggcgcgct cgagggccgg gaagaaggcg ggcgtcggct cgcacggcac
      721 ggagcggatc accccgcccg ccatcaggaa gccgaaggca tggatcgggt agctcggatt
      781 gggcaccagc accacgtcgc ccggggcggt gatcgcctgg gccatgttgg cgaagccctc
      841 cttggagccg agcgtcgcca cgacctgcgt ctcggggttg agcttcacgc cgaagcggcg
      901 ctcgtaatag ccggcctggg cgcggcgcag gccggcgatg cccttggagg ccgagtagcg
      961 gtcggtgcgc ggcttgccgg cggtctcgca cagcttggcg accacgtgcg gcggcgccgg
     1021 caggtccgga ttacccatgc cgaggtcgat gatgtcggcg ccgcccgccc gcgccgccgc
     1081 cttgatgcgg ttcacctgct cgaacacgta aggcggcagg cgtttgatgc ggtggaagtc
     1141 gctcatgctc cgggggtcct ttcggcgggc gccgcagggt ggccccacct gcttagcatc
     1201 gccggtgcgg cctgggcagc cctattggca gaggcggtta aggggttcgg ggggcgttgc
     1261 ccgggctcgg cgccggggtc gccccgagct ggcgggccga cgtggccttg gtttcgttct
     1321 gggcccgcgc ctggtccatc tcagcctcga ccgctttgac ctcgtcggcg gtcttggcct
     1381 ttgcgcgatt cggcgggagc accccgacgg gctggtagtc gaggctgtct ggccgcgacc
     1441 gctcgacgaa gtccgcggat ttggccggcg gggtgctgac ccccgtcgac agggcgatgt
     1501 cgcgcaccgg gttggtgtcg ctcgagcagg cggccagcgc cagcagcgcg gcggcggcgc
     1561 cgagatcgag ccaggtgcgg tgcgcgcgtc gtttcatggc cgtctggatg cggtcttcgg
     1621 gagggtcgga attcgttgca tggaatgtag caaaaatgct cgctagagcg ttaagatgtc
     1681 gaaaagacgg cttgcgccag agcgggggcg gggccaccaa agccggactg attccgcccc
     1741 ccattttttg tcgcatgacc ggctcggcaa agcgagttcg cgcttgccgt aggttcgagg
     1801 aggatcgctt ggagcgtgcg caacaggacc ccgcgtctca ggttccggtt cccgatttcg
     1861 aggctctctc gcgcaacatg gcgcagttcg tcgaggaggc cggcaaggcg actgccgcct
     1921 acctgaagcc ggtcgaggac ggccgcgccc ctggcggcgg gctggccgac gaggtcggcg
     1981 agatcgtcaa gacgctcggc cacgtggccg agaactggtt caccgatccg cagaaggcga
     2041 tcgaggcgca gacgcggctc ggctcgagct tcctcagcct gtgggccgga accctgaagc
     2101 gcatgcaggg ccaggaggcg cagcccgtcg ccgtgcccga cccgaaggac aaccgcttcc
     2161 gcgatccgga atggaccgac aacccggtct tcgacttcct caagcaggcc tatctcgtga
     2221 cgacgcgctg ggccgaggac ctggtcgagg acgcggaggg tctggacgag cagaccaagc
     2281 gcaaggcgcg cttctacgtg cgccagctcg caagcgcgct gtcgccctcg aacttcgtcg
     2341 ccaccaatcc ggagctgatc cgcgaaaccc tcaagcagag cggcgccaac ctcgtgcgcg
     2401 gcatgaggat gctggccgag gacatcgagg ccggcggcgg cgaggtcaag ctgcgccaga
     2461 ccgacccgtc gcgtttcgag gtcggcgtca acgtcgccga cgcgcccggc aaggtgatct
     2521 accgcaacga cctgatcgag ctgatccagt atgcgccgac cacggagacg gtgctgaagc
     2581 gcccgctgct gatcgtgccg ccgtggatca acaaatatta catcctcgat ctcaacaagg
     2641 agaagagctt catccgctgg gcggtggggc agggtctcac cgtgttcgtg atctcatggg
     2701 tcaatcccga cgagcgccac gccggcaagg gttttgccga atacatgcgc gagggcatct
     2761 tcgcggcgct cgtggcgatc aaggaagcga cgcgcgagcg gcaggtgacg gcgatcggct
     2821 attgcgtcgg cggcacgctg ctcgcctccg cgctcgccta catggcggcg atgggcgacg
     2881 accgcatcca gagcgcgacc ttcttcaccg cgcaggtcga tttcacccac gccggcgacc
     2941 tgaaggtct
//
LOCUS       DATAIQ010000812         1924 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_41792, whole genome shotgun sequence.
ACCESSION   DATAIQ010000812 DATAIQ010000000
VERSION     DATAIQ010000812.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1924)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1924)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1924
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_41792"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..433
                     /locus_tag="VHN20_13330"
     CDS             <1..433
                     /locus_tag="VHN20_13330"
                     /inference="COORDINATES: protein motif:HMM:NF019118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="HPr kinase/phosphatase C-terminal
                     domain-containing protein"
                     /protein_id="HEX2726796.1"
                     /translation="LRLSSENVHATAVAQDGRAVLICGPSGSGKSDLALRLIDRGFTL
                     VSDDRTMVRKNGSRLVASAPETIRGKIEVRGIGIVDMSDVQDVPVALVVELASDIQRL
                     PDDSRERSYLGLAVPLVSIDPRSASAAAKVALALDRLGLAS"
     gene            430..1356
                     /gene="rapZ"
                     /locus_tag="VHN20_13335"
     CDS             430..1356
                     /gene="rapZ"
                     /locus_tag="VHN20_13335"
                     /inference="COORDINATES: protein motif:HMM:NF015620.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HEX2726797.1"
                     /translation="MTGEPAGQPRLLLVTGLAGAGKSTVLAALEDMGWDTVDNLPLDL
                     LEAFVRGETRDRGPVPVAVGMDSRSRGFDAERLPAIVRAIPGVRAEILYLDCAGAELI
                     RRYDESRRRHPLAPDRPAEDGIARERGVTATLRSQADWVLDTSDLSPAELREELRRRY
                     GEDRDRPVVTIASFGFSRGISRTADLVFDMRFAPNPHWVDELRPLTGLDQPVRAYCAA
                     DPTWSATMASAEALLVRLIPRYWAAGKTYLTVAFGCTGGRHRSVAAAAEMAERLHAAG
                     IPAIVRHRDLATRPSDRVEDSPPAGAGSNSGD"
     gene            1357..1764
                     /locus_tag="VHN20_13340"
     CDS             1357..1764
                     /locus_tag="VHN20_13340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010163554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1902495 - transmembrane transporter
                     complex [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HEX2726798.1"
                     /translation="MIGLILVTHGRLAAEFITALEHVVGPQQGIEGICIDADDDMEAR
                     RGDIAEAIGRVNEGDGVIILTDLFGGTPSNLAISLMKDTGIEVIAGVNLPMLIRLEGA
                     RKVMGVRAAVAAAREAGRKYISVASEILGEAAA"
     gene            1761..>1924
                     /locus_tag="VHN20_13345"
     CDS             1761..>1924
                     /locus_tag="VHN20_13345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007798031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HPr family phosphocarrier protein"
                     /protein_id="HEX2726799.1"
                     /translation="MSHCSRQITVGNRRGLHARASAKFVNLVHSLPASVEVEKDGNRV
                     TGTSIMGLMML"
BASE COUNT          296 a          664 c          654 g          310 t
ORIGIN      
        1 ccttcgcctg agctccgaga acgtccatgc caccgccgtc gcgcaggatg gccgggcagt
       61 gctgatttgc ggcccgtccg gatcgggcaa gtccgacctt gcgttgcgcc tgatcgaccg
      121 cggcttcacg ctggtcagcg acgaccgcac gatggtccgc aagaatggaa gccgactggt
      181 cgcgagcgca cccgagacga tccgcggcaa aatcgaagtt cgcgggatcg ggatcgtcga
      241 catgtccgac gtccaggacg ttccggtggc actggtggtc gagcttgcga gcgacatcca
      301 gcgtctgccc gacgacagtc gcgagcgctc gtatcttggc ctggcagtac cgctcgtatc
      361 gatcgatccg cgatccgcgt cggccgcggc caaggtcgcg cttgcgctcg accgcctggg
      421 actggcgtcg tgacgggcga gccggccggc cagccacggc tgctgctcgt caccgggctc
      481 gccggcgctg gcaagtcgac cgtcctcgcc gccctcgagg acatgggctg ggacacggtc
      541 gacaatcttc cgctcgattt gctcgaggcg ttcgtgcgcg gcgagacccg cgaccgcgga
      601 ccggtcccgg tcgccgttgg catggactcg cgcagccgcg gcttcgatgc cgagcggctg
      661 ccggcaatcg tccgagctat tccgggcgtt cgcgccgaaa tcctttacct cgattgcgcc
      721 ggagccgagc taatccgccg ctatgacgaa tcgcgtcgcc gccatccgct cgcgcccgac
      781 cgcccggcag aggacgggat cgcccgcgag cgcggcgtga ccgcgacgct tcgaagccag
      841 gccgactggg tgctcgacac cagcgacctc agcccggccg agctgcgtga ggagcttcgc
      901 cgccgctatg gcgaggaccg cgaccggccg gtggtgacga tcgcctcgtt cggcttctcg
      961 cgcggcatct cgcgcaccgc cgatttggta ttcgacatgc gcttcgcgcc caatccgcac
     1021 tgggtcgacg agcttcgtcc gctgaccggg ctcgaccagc cggtccgcgc ctattgcgca
     1081 gccgacccga cctggtcggc gacgatggcc agcgccgaag cgcttctcgt gcggctcatt
     1141 ccccgctatt gggccgcggg caagacctac ctgacggtgg ccttcggctg taccgggggg
     1201 cggcaccggt cggtcgcggc ggcagccgag atggccgagc ggttgcacgc ggcggggatt
     1261 ccggcaattg tccggcaccg cgacctcgcc actcggccga gcgaccgcgt cgaggattca
     1321 cctcccgccg gggcgggcag taattcgggt gactgaatga tcggactcat actggtgacc
     1381 cacggccggc tcgcggccga gttcatcacg gccctggagc atgtcgtcgg cccgcagcag
     1441 gggatcgagg gcatttgcat cgacgccgat gacgacatgg aagcgcgccg cggcgacatc
     1501 gccgaggcga tcggccgggt caacgagggc gacggagtga tcatccttac cgacctgttc
     1561 ggcggaacgc cgtcgaatct tgcgatcagc ctgatgaagg acaccggcat cgaggtcatt
     1621 gccggagtca atttgccgat gctgatccgg ctcgagggtg cgcgcaaggt gatgggcgtc
     1681 cgcgccgccg tcgccgcagc ccgcgaagca ggccgcaagt acatctcggt agcctccgaa
     1741 atcctcggcg aggccgcggc ttgagtcact gctcgcgcca gatcacggtc ggcaatcgcc
     1801 gcgggctcca tgcccgggca agcgccaagt tcgtcaacct ggtccattcg ctgccggcct
     1861 cggtcgaagt cgagaaggac ggcaaccgcg tcaccggaac ctcgatcatg ggcctgatga
     1921 tgct
//
LOCUS       DATAIQ010000813         2838 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_411607, whole genome shotgun sequence.
ACCESSION   DATAIQ010000813 DATAIQ010000000
VERSION     DATAIQ010000813.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2838)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2838)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2838
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_411607"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..526
                     /locus_tag="VHN20_13350"
     CDS             <1..526
                     /locus_tag="VHN20_13350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726800.1"
                     /translation="ILDSLHARHRLLRISQGHQSRTEGSAMRHPFPNEIRQLSDEELE
                     SRNRVLLLMLFEMLRATHRTFLDEPQRFGRDLDILFVGLAIWLGDYEGRPMTPHKLAE
                     YLGMPRATTIRKIEELKRRGIAQDGPDNAVLIVPDVLKTEKARDRKRYWINTFWAGVD
                     QMSKLDAQPADLVQ"
     gene            complement(697..781)
                     /locus_tag="VHN20_13355"
     tRNA            complement(697..781)
                     /locus_tag="VHN20_13355"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(745..747),aa:Leu,seq:cag)
     gene            948..2027
                     /locus_tag="VHN20_13360"
     CDS             948..2027
                     /locus_tag="VHN20_13360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019906699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="complex I NDUFA9 subunit family protein"
                     /protein_id="HEX2726801.1"
                     /translation="MTDPERPYSPQPVTVFGGSGFLGRYVVDALAERNYRVRVAVRRP
                     NLVGYPQTYGMVGQVQAVQANLRYRQSIEHAVRGASAVINLVGILHPGSRQTFEAVHV
                     DGARAVAEAAAAAGARMIHVSAIGADPNSDSAYARTKAEGEAAVLAAHPNAIVMRPSL
                     MFGPGDGLFNRFAALAQFLPVLPLAGAESRFQPVFAGDVAKAIAQAVDGNVAGGRIYE
                     LGGPEVKSLRDLVTYMLAVIRRRRLVVGLPPGMARAQAALTEVAHLLSLGLLPDTLRL
                     SRDQVALLQHDNVVSDAARREGRTLEGLGIVPTTIEAIVPAYLVRFRKKGQFEVGRNA
                     GLGAPNLDQRAPGPTSSRAGEPGPP"
     gene            complement(1973..2710)
                     /locus_tag="VHN20_13365"
     CDS             complement(1973..2710)
                     /locus_tag="VHN20_13365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012319644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate transporter family protein"
                     /protein_id="HEX2726802.1"
                     /translation="MLIQAAFAAWRQVLFGPLRRILWRTLGLTVALLVLLWFGLTRLM
                     SYYLEGRQFGVDHPWIEGFAFFFAGAGLVIALVYFLPAVSALVAGYFLDDAAEIVERT
                     DFAADPPGQPLPMGRALLYGLRFAGLALLVNLAALTLFFVPVVNVGVFFAANAYLLGR
                     EYFELAAGRFRPMSEAAAMRKAHHGTVLLAGAMTAALLLVPLLNLLTPLFGVALMVHV
                     HKRLSARALSYGGPGSPARLEVGPGAR"
BASE COUNT          494 a          951 c          984 g          409 t
ORIGIN      
        1 cattttggac agcttgcacg cgcgacacag gctgttacga atttcgcagg ggcaccaatc
       61 ccgcacagag gggtcagcca tgcggcatcc attcccgaac gaaatccggc agctgagcga
      121 cgaggagctc gaaagccgca accgcgtcct gctgctgatg ctcttcgaga tgctgagggc
      181 aacgcaccgg acgttcctgg acgaacccca gcgcttcggc cgcgacctgg acatcctgtt
      241 cgtcgggctc gcgatctggc tcggcgacta cgaggggcgg ccgatgacgc cgcacaagct
      301 cgccgagtat ctcggcatgc cgcgcgccac caccatccgg aaaatcgagg agttgaagcg
      361 gcgcgggatc gcgcaggatg ggcctgacaa tgccgtgctg atcgtacccg acgtgctgaa
      421 aacggagaag gcgcgcgacc gtaaacgtta ctggatcaac accttttggg caggcgtgga
      481 ccagatgtcc aagttggacg cccagcccgc ggatctcgtg cagtagcgag tgacagctca
      541 cgcattcatg cggcgtttga cgccgcaagc ctgtacgctc cgcggcgcgt ccattgcgaa
      601 ttcgagatga cgacgatgtc tctctgctgt gtgtcgggac gagaagttgt ccgtgcggcc
      661 ttcaacgtct ttccgtcgca aggagcttag aaggggtggt gcccaggaga ggactcgaac
      721 ctccacggct ttcaccactg gtacctgaaa ccagcgcgtc taccaattcc gccacctggg
      781 catgccatcg agatggcgcg tcccgtttaa gggggcgcgg cggcgccgtc aatcggcggg
      841 cgtgatccga atcgccgctg gagataaccg cgtcgcggcg gcattcgtgc ccttcacagg
      901 acggcagcct cagcctaagg aacgccaatc gttgaccgga gctttcgatg actgacccgg
      961 agcgcccgta ttcgccgcag ccggtgacgg tgttcggcgg ctcgggcttc ttaggccgct
     1021 acgtcgtgga cgcgctcgcc gagcgcaatt accgggtgcg cgtcgccgtg cgccgcccca
     1081 acctcgtcgg ctacccgcag acctacggca tggtcggcca ggtccaggcg gtgcaggcca
     1141 acctgcgcta tcgccagtcg atcgagcatg cggtgcgggg cgccagcgcc gtgatcaacc
     1201 tcgtcggcat cctgcatccg ggcagccggc agacgttcga ggccgtgcat gtcgacggcg
     1261 cccgcgcggt cgccgaggcg gccgccgcgg ccggcgcgcg catgatccat gtctcggcga
     1321 tcggcgccga tcccaattcc gactcggcct acgcgcgcac caaggcggaa ggagaggccg
     1381 ccgtgcttgc cgcgcacccg aacgcgatcg tgatgcggcc ctcgctcatg ttcggccccg
     1441 gcgacggcct cttcaaccgc ttcgcggcgc tggcgcagtt cctgccggtg ctgccgctgg
     1501 ccggcgccga gtcgcgcttc cagccggtct tcgcaggcga cgtggccaag gcgatcgcgc
     1561 aggcggtcga cgggaatgtc gccggcgggc ggatctatga gctcggtggc cccgaggtga
     1621 agagcctgcg cgatctggtg acctacatgc tcgccgtgat ccgtcgcaga cgcctggtgg
     1681 tgggcctgcc gcctggaatg gcgcgcgcgc aggcggcgct gacggaagtc gcccacctcc
     1741 tgagcctcgg gctcctgccc gacacgctcc ggctgtcgcg cgaccaggtc gcgctgctgc
     1801 agcacgacaa cgtggtgtcg gacgcggcgc gccgcgaagg ccgcacgctc gaggggctcg
     1861 gcatcgtgcc gacgacgatc gaggcgatcg tgcccgccta tctcgtgcgc ttccgcaaga
     1921 aggggcagtt cgaggtcggc cgcaacgctg ggctgggagc gccgaacctc gatcagcggg
     1981 cgccgggtcc gacctccagc cgggccggcg agcccgggcc tccgtaggac agcgcgcgcg
     2041 ccgacaggcg cttgtgcacg tggaccatca gggcgacgcc gaacaaaggc gtcagaaggt
     2101 tcaacagggg cacgagcaga agcgccgccg tcatggcgcc ggcgaggagc accgtgccgt
     2161 gatgcgcctt gcgcatcgcc gccgcctcgg acatgggccg gaagcgcccc gccgcgagct
     2221 cgaaatattc gcgcccgagc aggtaggcgt tcgcggcgaa gaacaccccg acgttgacga
     2281 ccggaacgaa gaacagcgtc agcgccgcga gattgacgag cagcgcgagg ccggcgaagc
     2341 gcaggccgta gagaagggcg cggcccatcg gcagcggctg ccccggcgga tccgccgcga
     2401 aatcggtgcg ttcgacgatc tcggcggcat cgtcgaggaa atagcccgcg accagcgccg
     2461 acacggcggg caggaaatag accagcgcga tgacgaggcc cgcgccggcg aagaagaatg
     2521 caaatccctc gatccacggg tggtcgacgc cgaactggcg gccctcgagg taatagctca
     2581 tgagccgggt cagcccgaac cagaggagga cgagcagggc cacggtcagg ccgagcgtgc
     2641 gccacaggat gcgccgcaag gggccgaaca ggacctgccg ccatgccgcg aaggccgcct
     2701 ggatcagcat cggggatcac tcaatagggc gtgccgtcct tgcggaagaa gcggcgcttg
     2761 accgcgccgt ccggccgcac ctcgatgtcg tcgtcgggat agaagaccgc gtcggcgccg
     2821 gggcgccgcg atccgacc
//
LOCUS       DATAIQ010000814         3068 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_319261, whole genome shotgun sequence.
ACCESSION   DATAIQ010000814 DATAIQ010000000
VERSION     DATAIQ010000814.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3068)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3068)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3068
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_319261"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..574)
                     /locus_tag="VHN20_13370"
     CDS             complement(<1..574)
                     /locus_tag="VHN20_13370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008597674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX2726803.1"
                     /translation="MAGAAVPVQIRDVRKSFGHQEVISGVHIAIEPGEFVALVGPSGC
                     GKSTLLRMVAGLEEITSGEIVIDGTVVNALAPKERDVAMVFQSYALYPQKTVYDNMAF
                     GLRMRKVPAESIRERVAKAADMLGLGFAMSRLPKQLSGGQRQRVAMGRAMVRAPKVFL
                     FDEPLSNLDAKLRGQMRTEIKARHAALATTT"
     gene            688..1626
                     /locus_tag="VHN20_13375"
     CDS             688..1626
                     /locus_tag="VHN20_13375"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HEX2726804.1"
                     /translation="MLNLRQLEIFRAVMVAGSLTAAGRRLHMSQPAVSKAVRRMEDVL
                     GFQLFRRVHGRAQPTAEAGNLFREVDKIFHSVAVVEKYARDLKETHSGVLTLACTPTL
                     SCSFVPGAIAKFRRDHPKVRIWLQVTTTKEIIDLAASAQVDVGLIYAPADHSAVAVTP
                     LFETELVCVMSSDHPLADKPVIRPADLDQHAIIANVRNEPLHELLGAAFKEADLDNKV
                     MIGTNSTITACSLVQTGSGIAIVEPMGIRELFPRTVLRPFRPRIAITPRAINSRQVPL
                     SRIGRAFLGMLQESAVTQTVASSDESACFAHGYLRS"
     gene            1876..2961
                     /locus_tag="VHN20_13380"
     CDS             1876..2961
                     /locus_tag="VHN20_13380"
                     /EC_number="2.3.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020175282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-acetyltransferase"
                     /protein_id="HEX2726805.1"
                     /translation="MIVQKQVFELPRITTENGAVLKQVRIGWESYGTLNAERSNAVLV
                     THYFSGTSHAAGRYDPRDELPGYWDAIIGPGKAIDTDRYFVLSSDTLVNINARDPNVV
                     TTGPASIDPDTGKPYGMRFPVVSIGDFVNVQKALVESLGITRLKAIVGPSMGALQAYQ
                     WAVAWPHMVDRIIAVIGAAGGDPFLMAWLKLWAQPIRLDPKWNGGDYYDGEPPLDGLT
                     AAFETVILHASQSQWAREVFGRAPADPDKDPAHALDNPFRIEAAVRLAAAARAALADA
                     NNFLYMVRANQLASADPAKITTPALIVSSPTDLVFPAEWVARTVAAIRGNGTRVETAT
                     IAGPLGHLNGLQSIGQAAAPIADFLGG"
BASE COUNT          556 a         1002 c          963 g          547 t
ORIGIN      
        1 tcgtcgtcgt agcaagggca gcgtggcggg ctttgatctc ggtacgcatc tgcccgcgga
       61 gcttggcgtc gaggttggag aggggctcgt caaacaggaa caccttgggc gccctcacca
      121 tggcccgacc catagcgacc cgctggcgct ggccgcccga gagctgcttt ggcagccggg
      181 acatggcgaa accgaggccg agcatatcgg ccgccttggc gacccgctcg cgaatggact
      241 ccgccggaac cttccgcatg cgcagcccga acgccatgtt gtcgtagacg gttttctgcg
      301 ggtagagcgc gtagctctgg aacaccatgg cgacgtcgcg ctccttgggc gcgagggcgt
      361 tcacgacagt gccgtcgata acgatttcac cgctggtgat ttcctcgaga cccgcaacca
      421 tgcggaggag ggtcgacttt ccgcaaccgg acggaccgac gagcgccacg aactcgccgg
      481 gctcgattgc gatgtgcacg cccgagatga cttcctgatg tccgaaagac ttacggacgt
      541 cccgtatttg taccggcact gcagccccgg ccaatgctta cctcccgccg gccttttggc
      601 agggccttgc gatgggcagc atgggatggc accgtccatt cgtctaccct tattggggca
      661 acatcacata actctaggtt atcgacgatg ctcaatctcc gccagcttga gatctttcgg
      721 gcggtaatgg tcgccggcag cctgacggcg gccggacggc gccttcacat gtcccagccg
      781 gccgtcagca aggccgtccg ccgcatggag gatgtccttg gtttccagct tttccgccgg
      841 gtccacggcc gcgcccagcc gacggccgaa gccggcaatc tgtttcgcga ggtcgacaag
      901 atcttccact cagtggcggt agtcgagaag tacgcccgcg acctgaagga aacgcattcg
      961 ggggtgctca cccttgcttg cacgcccaca ctgtcatgca gctttgtgcc tggggccatt
     1021 gccaagttcc gccgcgatca cccgaaagtc cgcatctggc tacaggtgac caccacgaag
     1081 gaaatcatcg atctcgcggc gagcgctcag gtggacgtcg gattgatcta tgcgcctgcc
     1141 gatcattcgg ccgtcgcggt caccccactt ttcgagaccg agttggtctg cgtgatgtcc
     1201 tcagaccatc ctttggcgga caagccggtg atccgaccgg ctgacctcga tcagcacgcg
     1261 attatagcca acgtgcgcaa cgagccgctg cacgagctcc tcggcgccgc gttcaaggag
     1321 gcggatctcg acaacaaggt catgatcggg acgaacagca cgatcacggc gtgctcgctc
     1381 gtgcagaccg ggagcggcat cgccattgtc gagccaatgg gcattcgcga gctttttccg
     1441 cggacggtgc tgcggccctt ccgtccacgc attgcgatca cgcctcgcgc catcaactcc
     1501 cgtcaagttc cattatcccg catcggacgg gcattcctcg gaatgctgca agagagtgcc
     1561 gtaactcaga cagttgcgtc ttcggacgaa tctgcctgtt tcgcgcacgg ttatttgcgc
     1621 agttgatcat gtcagagatc catgatcacc ccgaatggga agaaaccgac accggaagcc
     1681 gagtagcgta ggggaggctt tcaagaaggc agaacattgc gacgagacat acctgcactt
     1741 gcggcgaagg cggcggagtc cgcttgcacg gtaggcggcc caaaatcgga ccgtcggcgg
     1801 ccaccttcgg agaaatcgcc cccttgcagc atggcccggg atgcgaaaga tcaccggaat
     1861 gacggagttg ctccggtgat cgtccagaag caggtgttcg agctgccgcg aatcacgacc
     1921 gagaacggcg cggtgctgaa gcaggtgcgg atcgggtggg agagctacgg cacgctcaac
     1981 gccgagcgtt ccaacgcggt cctcgtgacg cactatttct ccggcacgag tcatgccgcc
     2041 ggccgctacg atccgcgtga cgagctgccc ggctactggg acgcgatcat cgggcccggc
     2101 aaggcgatcg acacggaccg ctatttcgtc ctgtcgtcgg acacgctcgt caacatcaac
     2161 gcgcgcgacc cgaacgtcgt gacgaccggg ccggcgtcga tcgacccgga caccgggaag
     2221 ccttacggca tgcgcttccc ggttgtgtcg atcggcgact tcgtcaacgt gcagaaggcg
     2281 cttgtcgaaa gcctcggcat cacgcggctg aaagccatcg tcggtccgtc gatgggcgcg
     2341 ctccaggcct atcaatgggc ggtcgcatgg ccgcacatgg tcgatcgcat catcgccgtg
     2401 atcggcgccg ccggcggcga cccgttcctg atggcctggc tgaagctctg ggcgcaaccc
     2461 atccggctcg acccgaaatg gaatggcggc gactactacg atggcgagcc gccgctcgac
     2521 ggcctgaccg ccgcgttcga gaccgtcatc ctgcacgcca gtcagtcgca atgggcgcgc
     2581 gaggttttcg ggcgggcgcc tgccgacccg gacaaggatc ccgcgcacgc gctggacaat
     2641 ccgttcagga tcgaggctgc cgtgcgcctt gcggccgctg cgcgcgcggc gctcgccgat
     2701 gccaacaact ttctctacat ggtgcgcgcc aaccagctcg cctcggccga tccggcgaag
     2761 atcacgacgc cggcgctgat cgtctcgtcg ccgaccgacc tcgtttttcc ggcggaatgg
     2821 gtggcgcgca cggtagcggc gatccgcggc aacggaaccc gcgtcgagac cgccaccatc
     2881 gccggcccgc tcgggcacct caacgggctg caatccatcg gccaggcggc agccccgatt
     2941 gccgattttc tgggcgggtg agatgagatt ccatcccttg ttattatcga ctttcccgag
     3001 gaggacgagg gcccggtatc gcgcgagcgc gtgctcgacg ccgcgcaacg cgcgatcgag
     3061 gcgatcga
//
LOCUS       DATAIQ010000815         4338 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_319262, whole genome shotgun sequence.
ACCESSION   DATAIQ010000815 DATAIQ010000000
VERSION     DATAIQ010000815.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4338)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4338)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4338
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_319262"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..338
                     /locus_tag="VHN20_13385"
     CDS             <1..338
                     /locus_tag="VHN20_13385"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEX2726806.1"
                     /translation="IRAGAARAIGVTSAKRLKAFPDVPTFAEAGFPELVGITWFSISG
                     PKGMPKDVVDKLNKEIVRIMALPQVQERLARDEITTEPYTAEQFTKFVTDEAAKWGPI
                     AKASGAQPE"
     gene            complement(466..1413)
                     /gene="pip"
                     /locus_tag="VHN20_13390"
     CDS             complement(466..1413)
                     /gene="pip"
                     /locus_tag="VHN20_13390"
                     /EC_number="3.4.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007198117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0030163 - protein catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl aminopeptidase"
                     /protein_id="HEX2726807.1"
                     /translation="MRRLYPPIEPYRSGALEVGDGHCIYWELCGNPRGKPAVFLHGGP
                     GGACNRDHRRFFDPERYNVLLFDQRGCGRSTPHASLEANTTWHLVADLERLRTMLGVE
                     RWLVFGGSWGATLALAYAESHPQRVSELVLRGVFTVRRSELHWLYQEGASLLFPDKWE
                     RFLAPIPERERGDLMAAYYERLTGADRDVQLRAAKAWSGWEGEIVTLLPNARAVAQHA
                     EDNFALAFARIEAHYFVHGGFLEEGQLIRDAGRLAAIPGTIVQGRYDVVTPAVTAWQL
                     REAWPRAVLHLVDDAGHASSEPGIVNRLIEALDAYAGGA"
     gene            complement(1478..2995)
                     /locus_tag="VHN20_13395"
     CDS             complement(1478..2995)
                     /locus_tag="VHN20_13395"
                     /inference="COORDINATES: protein motif:HMM:NF018032.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine ammonia-lyase reactivating factor
                     EutA"
                     /protein_id="HEX2726808.1"
                     /translation="MADDEGGRIFFSNIGRSLEEEDEIRLTSVGVDIGSSTSHLVFSR
                     LVLERLDNRYMVSVRVVFHESDVLLTPYADDMTIDAERLGAFIAEQYRLAGLDHDAID
                     TGALILTGVAVRRRNARAIGELFANQAGKFVAVSAGDALETTLAAFGSGAAARSIRES
                     SRVMNVDIGGGTSKIAVCEGGEVVDQTAIDVGARVISFDDDGNVIRIEEAGRRFAAEA
                     GVPLEIGDCPSEGMLLKIVERMVERLFEAMGGAPLSEASAALLRLEPLRNGRPPDALT
                     FSGGVSEYIYGHEQSDFGDLGPLLADLIKARVKGWAPRIEPPVEGIRATVVGASQYTI
                     QVSGSTIFVTPLDVLPLRNLPVITPDLALDDEVLNPGALAAAVHGALRRLDLHGGKQA
                     VALCYRWRGSATFARLDAFCRGVADGLASILSRGFPLVLVGDGDIGGLVGIHCREEAQ
                     LGCPVVSIDGIVLKEFDFVDIGAMLEASGAVPVVIKSLVFPTTAALGRVDSEVAA"
     gene            complement(3029..4276)
                     /locus_tag="VHN20_13400"
     CDS             complement(3029..4276)
                     /locus_tag="VHN20_13400"
                     /inference="COORDINATES: protein motif:HMM:NF012417.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX2726809.1"
                     /translation="MPHDAPGQGTVHWHEPSGHKKAGFGQFKKQPTPYDAFMESEGIP
                     VFRDIGISKVQNLPLMPWKRKGGRGHYIQLYGTETKWGCYVVEVPPGGALNPEKHMYE
                     EIFLVVEGRGTTEVWVEGDQKKHVFEWQKGSMFSIPMNAWHRIVNATSGGALLLAGTT
                     APNVLNQLNNVDAVFNNPFVFRDRFSGADDFFKPKDDIEPDPVRGLAMRRTNFIPDVI
                     DCELPLDNRRSPGYRRIEPFMTNNVFYFWIGQHEAGRYSKAHAHTSAAVLICIKGKGY
                     TYSWPERLGETPWQDGHADQVRRLDYEPVGLVTAAPGGARWYHQHFSVSKEPFRLTAW
                     FGPHNPGRDPGAPGEKHTDYTAIDVHEGGTAIPYWMEDPYVRKEYEETLRRNGVDSRM
                     DPAWFNKPPGVEWPPRSRAVAAE"
BASE COUNT          733 a         1464 c         1441 g          700 t
ORIGIN      
        1 atatccgcgc gggcgccgcg cgcgccatcg gcgtgacgtc ggccaagcga ctcaaggcct
       61 tcccggacgt gccgaccttc gccgaagccg gctttcccga gctcgtcggc atcacctggt
      121 tctcgatctc cggtcctaag ggcatgccca aggacgtggt cgacaagctc aacaaggaga
      181 tcgtgcgtat catggcgcta ccgcaggtcc aggagcgtct cgcccgcgac gagatcacca
      241 cggagcccta tacggccgag cagttcacga aattcgtgac cgacgaagcg gcgaagtggg
      301 gcccgatcgc caaggcttcg ggcgcgcagc ccgaatagcg gacgcgcctg acgacagctg
      361 ccagagcagg atcgcttcag ccgaggcgac cccgctcttc ttatcaggcc gcatgatctt
      421 ttcggcgaag cggtatcgac ttcgccggat catgcgctgg gactttcatg ctccgcccgc
      481 gtaggcgtcg agcgcctcga tcagacggtt tacgatgccg ggctcgctcg acgcatggcc
      541 ggcgtcgtcc acgagatgca gcacggcgcg aggccacgcc tcgcgcagct gccatgcggt
      601 gaccgccggc gtcaccacgt cgtagcggcc ctgcacgatc gtgccgggga tggcggcgag
      661 gcggccggcg tcgcggatca gctggccctc ctcgagaaag ccgccgtgca cgaaataatg
      721 cgcctcgatg cgcgcgaagg cgagcgcgaa gttgtcttcg gcatgctgcg caacggcgcg
      781 cgcgttcggg agcagcgtta cgatctcgcc ctcccacccg ctccacgcct tggccgccct
      841 gagctgcacg tcgcggtcgg cgcctgtgag ccgctcgtaa taggcggcca tgaggtcgcc
      901 gcgctcgcgt tccgggatcg gagccaggaa gcgctcccat ttgtccggga acagaagcga
      961 agcgccctcc tgatagagcc agtggagttc gctgcggcgg accgtgaaga cgccgcgcag
     1021 cacgagctcg ctgacccgct gcgggtggct ttcggcgtaa gcgagcgcga gcgtcgcgcc
     1081 ccacgagccg ccgaacacga gccagcgctc gacgccgagc atggtgcgca gccgttcgag
     1141 atcggcgacc agatgccagg tggtgttggc ctcgaggctg gcatggggcg tcgagcggcc
     1201 gcagccgcgc tgatcgaaga gcagaacgtt atagcgctcc gggtcgaaga agcggcggtg
     1261 gtcgcgattg caggcgccac cgggcccacc gtgcagaaac accgccggtt tgccgcgcgg
     1321 gttgccgcac agctcccaat aaatgcagtg gccgtcgccg acctcgaggg cgccgctgcg
     1381 gtaaggctcg atgggcgggt agagccggcg catgcctcct ggcgccgcac tggacggcgg
     1441 cccctcttgc tcctgctccg cgtcccggct cataccctca cgcggcgacc tcgctgtcga
     1501 cgcgaccgag cgcggcggtg gtcgggaaga cgagcgactt gatcacgacc gggacggcgc
     1561 cggaggcctc cagcatcgcc ccgatgtcga cgaagtcaaa ttccttgagc acgatgccgt
     1621 caatggagac gaccggacaa ccgagttgtg cctcttcgcg gcagtggatg ccgacgaggc
     1681 cgccgatgtc gccatccccg accagcacga ggggaaatcc gcgcgacagg atgctcgcca
     1741 gaccatcggc aacgccacgg cagaacgcat cgaggcgcgc aaaggtcgcc gacccgcgcc
     1801 aacgatagca cagcgcaacc gcctgctttc ccccgtgcag gtcgagacgg cgcaaggcgc
     1861 cgtgaactgc cgccgcgagg gcgccgggat tcagcacttc gtcgtcgagc gccagatcgg
     1921 gcgtgatgac cggaaggttg cgcagcggca ggacgtcgag cggcgtcacg aaaatcgtgc
     1981 tgccgctcac ctggatcgtg tattgcgacg cgccgacgac ggtggcgcgg attccttcga
     2041 cgggcggctc gatgcgcggc gcccatccct tcacgcgcgc cttgatcagg tcggcgagga
     2101 gcgggccgag atcgccgaaa tcgctctgct cgtgcccata gatgtattcc gagacgccgc
     2161 cggaaaatgt cagcgcgtcg ggcggacggc cgttcctgag cggctcgagc cgcaacagcg
     2221 cagcgctggc ctcgctcagg ggagcgccgc ccatcgcctc gaacaggcgc tccaccatgc
     2281 gctccacgat cttgagcagc atgccttcgc tcggacaatc gccgatctcg agcggcacgc
     2341 cggcttccgc cgcgaaccgc cggccggcct cctcgatgcg gatcacgttg ccgtcgtcgt
     2401 cgaacgagat cacccgcgcc ccaacatcga tcgcggtctg gtcgaccacc tcgccgccct
     2461 cgcagacggc gatcttcgag gtgccgcccc cgatatcgac gttcatcacg cgagaggact
     2521 cgcggatcga gcgggccgcg gcgcccgaac cgaaggcggc aagcgtcgtc tcgagcgcgt
     2581 cgcctgcgct cacggcgacg aacttcccgg cctggttcgc gaacaattcg ccgatggcgc
     2641 gggcgttgcg ccgccggacc gcaaccccgg tcaggatcag cgcgcccgtg tcgatggcgt
     2701 cgtgatcgag gccggccagg cgatactgct ccgcgatgaa ggcgccgaga cgctccgcat
     2761 cgatcgtcat gtcgtccgca tacggcgtca gcagcacgtc cgactcgtga aacaccacgc
     2821 gcacggacac catgtagcgg ttgtcgagcc gctccagcac cagacgcgag aacacgaggt
     2881 gcgaagtgga cgagccgata tcgacgccca cgctggtgag ccggatctcg tcctcctcct
     2941 cgaggctgcg cccgatattg gaaaagaaga tccggccgcc ttcatcatcg gccatgcgtc
     3001 ctgccccctt gctcgtcagt tgcccaagtt attcggcagc gaccgcacgc gaccgcggcg
     3061 gccactcgac gccgggcggc ttgttgaacc aagcgggatc catgcggctg tcgacgccgt
     3121 tgcggcgcag cgtttcctcg tattccttgc ggacgtaagg atcctccatc caatacggga
     3181 tcgcagtgcc gccctcatgc acgtcgatgg cggtgtagtc cgtgtgcttc tcgccgggcg
     3241 cgccggggtc gcggccggga ttgtgcggcc caaaccacgc ggtgagccgg aacggctcct
     3301 tcgagacgct gaaatgctgg tgataccagc gcgcgccgcc cggcgcggcg gtcaccagcc
     3361 cgaccggctc gtagtcgagg cggcgcacct gatcggcatg accgtcctgc cagggcgtct
     3421 cgccaaggcg ttcgggccag gaataggtgt agcccttgcc cttgatgcag atcagcacgg
     3481 cggcggaggt gtgcgcatgc gccttcgaat agcgcccggc ctcgtgctgc ccgatccaga
     3541 agtagaacac gttgttggtc atgaacggct cgatgcgccg atagcccgga gaacgccggt
     3601 tatcgagggg caactcgcaa tcgatgacgt ccgggatgaa gttcgtgcgg cgcatggcca
     3661 gaccgcgcac cggatcgggc tcgatgtcgt ccttcggctt gaagaagtcg tcggcgccgc
     3721 tgaagcggtc gcggaacacg aacggattgt tgaacaccgc gtcgacgttg ttgagctggt
     3781 tcagcacgtt cggcgcagtc gtgccggcga gcagcagcgc gccgcccgag gtggcgttga
     3841 cgatacgatg ccaggcattc atcgggatcg aaaacatcga tcccttctgc cattcgaaga
     3901 cgtgcttctt ctggtcgcct tcgacccaca cttcggtggt gccgcggcct tccacgacga
     3961 ggaaaatctc ctcgtacatg tgcttctcgg gattgagcgc gccgccgggc ggcacctcga
     4021 ccacatagca gccccatttg gtctcggtcc cgtagagctg gatgtagtgg ccgcgcccgc
     4081 ctttgcgctt ccatggcatc aggggcaggt tctgcacctt gctgatgccg atgtcgcgga
     4141 acaccggaat gccctccgat tccatgaagg cgtcgtacgg ggtcggctgc ttcttgaact
     4201 ggccgaagcc ggccttcttg tggcctgacg gctcgtgcca atggactgtg ccttggccgg
     4261 gagcatcatg cggcatggtt ccctcctgaa cgttagcggg tgcggcagca gggcaacggg
     4321 cgccgtagga agacggtc
//
LOCUS       DATAIQ010000816         3578 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_411826, whole genome shotgun sequence.
ACCESSION   DATAIQ010000816 DATAIQ010000000
VERSION     DATAIQ010000816.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3578)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3578)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3578
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_411826"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..465
                     /locus_tag="VHN20_13405"
     CDS             <1..465
                     /locus_tag="VHN20_13405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012111605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA ester lyase"
                     /protein_id="HEX2726810.1"
                     /translation="LGTFMHTSPRLAGMTWGGEDLSVDVGAETNRDEGGRYTEPYRLA
                     RSLTLFGAAAAGVDPIDAVYTNFRDEAGLLAECRDARRDGFVAKMAIHPAQVAVINEA
                     FTPSAEALAKARAIVDAFARSPGAGVVGLDGEMLDRPHLERAERLLARMGKA"
     gene            complement(540..992)
                     /locus_tag="VHN20_13410"
     CDS             complement(540..992)
                     /locus_tag="VHN20_13410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726811.1"
                     /translation="MNIIPFIPAASSSRSWNAHELETLVSVYQAHASRGDATAWDVGA
                     TELDDPQFFVVGPAPEAACIVAISRVGRIYVLEDGSGHVLQEGTSLEPVAARAKAPLG
                     ESRPLRLIARVTLALTAFRMAVEQKVEPILAEGEEILLRIAPQLASLV"
     gene            complement(989..1294)
                     /locus_tag="VHN20_13415"
     CDS             complement(989..1294)
                     /locus_tag="VHN20_13415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012329644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEX2726812.1"
                     /translation="MAASIQFASASPDAKQLRKAAGRWLQEQRKKAGLSQIQLAELLG
                     LKYYTFVSQVENGFGRVPSDSMEGWARALGLAPAEFARHLLSFYDPELHRLLFKDEA"
     gene            1438..1755
                     /locus_tag="VHN20_13420"
     CDS             1438..1755
                     /locus_tag="VHN20_13420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726813.1"
                     /translation="MATHARSHGDDADGPEFALAGASALTAATVVASAWKLPFELILP
                     VTSLVLLASGFALALAAWRRPVRADRLSYRDVAGLLVFFGFGAALMSDTAALSPLFAG
                     DSR"
     gene            1839..2537
                     /locus_tag="VHN20_13425"
                     /pseudo
     CDS             1839..2537
                     /locus_tag="VHN20_13425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018072717.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
     gene            2854..>3578
                     /gene="deoC"
                     /locus_tag="VHN20_13430"
     CDS             2854..>3578
                     /gene="deoC"
                     /locus_tag="VHN20_13430"
                     /EC_number="4.1.2.4"
                     /inference="COORDINATES: protein motif:HMM:NF013916.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004139 - deoxyribose-phosphate aldolase
                     activity [Evidence IEA];
                     GO_process: GO:0009264 - deoxyribonucleotide catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribose-phosphate aldolase"
                     /protein_id="HEX2726814.1"
                     /translation="MVDLTTLEGQDTHGKVRALAAKAMHPDPADPSCPMTAAVCVYPD
                     LVATAREVLGDSGVHVAAVATAFPSGRAALGIKLADTRDAVEAGADEIDMVIDRGAFL
                     SGRFLDVHDEIVAVREACVRPDGSSAHLKVILETGELQTYDNVRRASWLAMAAGAHFI
                     KTSTGKVQPAATLPVTLVMLEAVRDFREATGAMVGVKPAGGIRSTKDAIKYLVMVNEV
                     AGAGWLDPNWFRFGASTLLNDLL"
BASE COUNT          553 a         1217 c         1193 g          615 t
ORIGIN      
        1 ctcggcacct tcatgcacac gagcccgcgc ctcgccggga tgacgtgggg cggcgaggac
       61 ttgtcggtcg atgtcggcgc cgagaccaac cgcgacgagg gcgggcgcta caccgagccg
      121 tatcggctgg cgcgcagcct cacgctgttc ggcgccgcgg ccgccggcgt cgatccgatc
      181 gacgcggtct acaccaattt ccgcgacgaa gccggcctcc tcgccgagtg ccgcgacgcg
      241 cgccgcgacg gcttcgtcgc caagatggcg atccatccgg cgcaggtggc ggtgatcaac
      301 gaggccttca cgccctccgc ggaagccctc gccaaggccc gcgccatcgt cgatgccttc
      361 gcacgcagtc ccggagccgg cgtggtcggc ctcgacggcg agatgctcga ccggccgcat
      421 ctcgagcgtg ccgagcgcct gctcgcacgg atgggaaaag cttgaacacc cctgtcattc
      481 cggggcggcc caatgggccg aacccggaac ctgcgaccgg gtgcaaacgc ccgtaatttc
      541 taaacgagcg acgccagctg cggggcgatg cgcagcagga tctcttcgcc ttcggcgagg
      601 atgggctcga ccttctgctc gaccgccatc ctgaacgcgg tcagggcgag cgtgacgcgg
      661 gcgatcagcc gcagcggccg gctttcgccg agcggcgctt tggcacgcgc agcgacgggt
      721 tcaagcgacg tgccttcctg gagcacgtgc ccgctgccgt cctcgagcac gtagatccgt
      781 ccgacgcgcg agatggcgac gatgcaggcg gcttcgggcg cgggcccgac gacgaagaac
      841 tgcgggtcat caagctcggt cgcgccgacg tcccacgcgg tcgcgtcgcc gcgcgacgca
      901 tgcgcctggt agacggacac cagcgtctcg agctcgtgcg cgttccagga cctggagctc
      961 gaagccgcgg ggatgaaagg gataatgttc atgcctcatc cttgaaaagc aggcggtgga
     1021 gttcggggtc gtagaaagac aggagatggc gggcgaactc ggcgggggca agcccgagcg
     1081 cgcgggccca tccttccatg ctgtcggacg ggacccggcc gaagccgttc tccacctgcg
     1141 acacgaaggt gtaatatttg agccccagca attcggcgag ctggatctgc gacaatcccg
     1201 ccttcttgcg ctgttcctga agccagcggc cagccgcctt gcgcagctgt ttcgcgtcgg
     1261 gtgacgcgct ggcgaactga atcgatgctg ccatcgagaa ccctcttgcg ccgcgcctat
     1321 ttcaaagtta cgaaacgtag tgtcgcgcta cgcgtgacat ataaatttat tagcacgcca
     1381 tgtgcgcgag gcaaagcggg cgcgcgggcg tggcaggccg cattggagtg aaacgtcatg
     1441 gcgacccatg cccgttctca tggagacgac gccgacggac cggagttcgc actcgccgga
     1501 gcctcggccc tgacggcggc aaccgtcgtg gccagcgcat ggaagctgcc cttcgagctc
     1561 atattgcccg tcacgagcct cgtgctcctg gcgagcggct ttgcgctcgc cctcgccgcc
     1621 tggaggcgcc cggttcgggc cgaccggctt tcctaccgcg acgtggccgg gctgctcgtc
     1681 ttcttcggct tcggcgccgc cctcatgagc gacaccgcgg cgctgtcgcc gctttttgcc
     1741 ggcgacagcc gctgaccgca cccgcttgca aaggcgacct ttttcacatc gcccggcacg
     1801 tcgctggtgt ccgcggcatc agggccagag catcgtaaat ggaatatttg atcagccttg
     1861 ccgtcgatcc gaccgtctgg gcggccctcg tcgccctcat cggcatggag gtcgtgctcg
     1921 gcatcgacaa cctgatcttc atctcgattc tcaccaacaa gctgccggcc agctaccagt
     1981 cgcgggcgcg gcgcatcggc atcggtctcg cgctcggcat gcgcctgatc ctcctcggca
     2041 gcatcgcctt catcgtccag ttgaccgagc cgctgttcga ggtgttcggc ctcgatttct
     2101 cctggcgcga cctgatccta atcggcggcg gcctattcct cgtgtggaaa tcgaccaccg
     2161 agatccatca caacctcacg cccgaccacg gctccgacgt gttcggctcg agcgccgcca
     2221 cgctcggctt cggcgccgcg atcgtgcaga tcatcctgct cgaccttgtc ttctcgctcg
     2281 acagcatcat caccgccgtg ggcatgactg atcacctgcc gatcatggtg atcgcggtgc
     2341 tcgtcgcggt tttgaccatg ttgctggcgg cggacccgct ggcgcgcttc atccacaaca
     2401 acccgaccgt ggtgatgctg gcgctgagct tcctcctgat gatcggcatg acgctgatcg
     2461 ccgagggttt tggcgcgcat gtgcagaagg gctacgtcta cgcggcaatg gccttctcga
     2521 cgctggtgga ggcgctgact ccgagctgga aaagatcggg gacactgaga cctgtcaggg
     2581 tctgtgatcc tccgccggcc gggcatctcg gtgcccggcc ggcccccttt acgaaaggac
     2641 acagaggtgc tgtcacccac tcgggccccc ggaagccccg tgcggcagtc cgcggacttc
     2701 tccgacgtga cccggtccga ggcgtcgttg cgtcggttcc tgcatgggct gccgggtgtc
     2761 gaccaggtgg gcgccgaggc gcgtgcggcg gcgctcgggt cccgctcgat caagacgacc
     2821 gcgaaggcgt tcgccatcga cctggccatc cggatggtcg atctgaccac cctggagggc
     2881 caggacaccc atgggaaggt ccgtgcgctg gcggccaagg cgatgcaccc ggacccggcc
     2941 gatccgtcgt gcccgatgac ggcggcggtc tgcgtgtatc ccgatctggt ggccaccgct
     3001 cgcgaggtgc tcggcgacag tggcgtgcac gtggccgcgg tggccacggc gttccccagt
     3061 ggccgggcgg cgctgggcat caagctggct gacacccgcg atgcggtcga ggccggtgcc
     3121 gacgagatcg acatggtcat cgaccggggc gcgttcctct cggggcgctt cctcgacgtg
     3181 cacgacgaga tcgtcgcggt ccgtgaggcg tgcgtgcgtc ccgacggctc gagtgcgcac
     3241 ctgaaggtga tcttggagac cggcgagctg cagacctacg acaacgtgcg tcgtgccagc
     3301 tggctggcga tggcggccgg tgcccacttc atcaagacct ccaccggcaa ggtgcagccg
     3361 gcggccaccc tgccggtgac cctggtgatg ctcgaggcgg tccgcgactt ccgtgaggcg
     3421 accggggcga tggtcggcgt gaagccggcc ggcggcatcc gcagcaccaa ggacgccatc
     3481 aagtacctcg tgatggtcaa cgaggtggcc ggggcgggct ggctggaccc gaactggttc
     3541 cgcttcggcg cctccacgct gctcaacgac ctgctgat
//
LOCUS       DATAIQ010000817         2394 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_249952, whole genome shotgun sequence.
ACCESSION   DATAIQ010000817 DATAIQ010000000
VERSION     DATAIQ010000817.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2394)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2394)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2394
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_249952"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..375)
                     /locus_tag="VHN20_13435"
     CDS             complement(<1..375)
                     /locus_tag="VHN20_13435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726815.1"
                     /translation="MAAAARLQAQQDMAAVLERLDRLERQNRELIEEVRALRAEVSGR
                     DAGPPAEATLDERLSVQERRVEEQAQAKVESGRKVPMRVTGVVLFNAFLNTSRFAGTA
                     DYPTAAALTPGPRTSGGSLRQST"
     gene            complement(392..790)
                     /locus_tag="VHN20_13440"
     CDS             complement(392..790)
                     /locus_tag="VHN20_13440"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX2726816.1"
                     /translation="MSVCNGTVLVVEDAGPCATTLEIALARVAGLRVRVVSTVEDACA
                     ALADDAGVCAVVTDLHIGKESGLDLIRWMRRGGGRRLPIIVISGDSDPETPAASLRLG
                     ADAYFAKPFSPAEVRHKLEDLIHGDDSSPL"
     gene            complement(787..1461)
                     /locus_tag="VHN20_13445"
     CDS             complement(787..1461)
                     /locus_tag="VHN20_13445"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX2726817.1"
                     /translation="MQTVLVIDDDESLRDTIGVLLEQEGFRAVQAADGRTGLEQALAL
                     KPDLLLVDLRLPGLSGMEVCKNVRAAGLASAVIVLSALGDEIDKVLLLELGADDYVVK
                     PFGTRELMARIRAVLRRTGPERSRLIQFDETEVDLEHRIVRRRGEEVRFTPAEYNLLT
                     FFLQNPNKPLTRDLILNSVWGYESYPNTRTVDAHVVRLRQKLEPEPNTPRHFVTVHGV
                     GYRFLP"
     gene            1669..2376
                     /locus_tag="VHN20_13450"
     CDS             1669..2376
                     /locus_tag="VHN20_13450"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEX2726818.1"
                     /translation="MVALSMTSPSIAWLPSPAHETAESRSGGAPAGGAAFPDTPRPEQ
                     LFCAPSPAESDQELIRRTSLGDRGAFDLLIARHAEAVLRYLRVLAQSHHDAEDILQET
                     LLAAYRFAGQYRGDASFRTWLYRIAANAYRQERRKSRRAPSPVSLGIDPPQSPEQMAI
                     DRQRRAILDRVLGGLPATDRDVIMLRDISDLSTEQTAHALGIGVPAVKTRLHRARVRL
                     ASELTRRRAIARCAGAA"
BASE COUNT          365 a          977 c          648 g          404 t
ORIGIN      
        1 cgtgctctgt cgaagcgatc ccccgctcgt ccgtggaccc ggcgtcagtg ccgccgctgt
       61 cggatagtcg gctgtccccg caaaccggct cgtgttcaga aacgcgttga acagcaccac
      121 gccggtcacg cgcatcggaa ccttgcggcc cgactccacc tttgcctgcg cctgctcctc
      181 gacccgccgc tcctgcacgg acaggcgctc gtctagcgtc gcctcagccg gcggccccgc
      241 gtcgcgcccg ctcacctctg cccgcagcgc ccggacctcc tcgatcaatt cccggttctg
      301 ccgttcgaga cggtccaagc gctcgagcac cgccgccata tcctgctgcg cttgcagccg
      361 cgctgccgcc gccattaccg ccagcaccgc gctacagcgg agagctgtcg tccccatgaa
      421 tcaggtcctc cagtttgtgc cgcacctcgg ccggcgagaa gggcttggcg aagtatgcgt
      481 ccgctcccag ccgcaaactc gccgcaggcg tctccggatc cgagtcgccg ctgatcacga
      541 tgatcggcag ccgccgccct ccgccgcgcc gcatccaccg gatcaggtcc agcccgctct
      601 cttttccgat atgcaggtct gtcacgaccg cgcatacgcc ggcatcgtcc gccagcgccg
      661 cgcacgcatc ctccaccgtc gacaccacgc gcacccgcag ccctgccacc cgcgccagcg
      721 cgatttcgag cgtcgtcgcg cacggcccgg cgtcctccac taccagcact gtcccgttgc
      781 agacgctcat ggcaggaatc ggtaccccac cccgtggacc gttacgaaat gacgcggcgt
      841 gttcggctcc ggctccagct tctgccgcag ccggaccacg tgtgcgtcaa ccgtccgcgt
      901 gttcggatac gattcgtatc cccacacgga attcagaatc agatcgcgcg tcagcggctt
      961 gttcggattc tgtaggaaga aggtcagcag gttgtactcg gccggcgtga accgcacctc
     1021 ctccccccgc ctccgcacga tccggtgctc gagatccact tccgtctcgt cgaactggat
     1081 cagccgcgac cgctccgggc cggtccgccg cagcactgcc cggatccgcg ccatcagttc
     1141 gcgcgtgccg aacggcttca ccacgtaatc gtccgcgccg agttcgagca gcagcacctt
     1201 gtcgatctca tcgccgagcg cgctcagcac aatcactgcc gaggccagcc ccgccgcccg
     1261 cacattcttg cagacctcca ttccgctcaa cccgggaagc cgcagatcga ccagcagcag
     1321 gtccggcttc agcgccagcg cctgctcgag gcccgttcgt ccgtccgccg cctgcaccgc
     1381 acggaagccc tcctgctcga gcagcacgcc gatcgtatcg cgcagactct catcgtcgtc
     1441 gatcaccagc accgtctgca tgctggttcg attctacgcg cccctgcaag accgccgccc
     1501 cacggaagcc gccctcgtcc cgttccccca atgccggatt tgtgaacgaa ttgtaaacgc
     1561 cgcccggcgt gagcccgcgc acgccgcacc tgccgccctc acatctgttc gcaaatcctt
     1621 tacatcttct ttgcgactcc acgccctcgc aggcactaca gtggccgcat ggtcgcactc
     1681 agcatgacct ccccatcgat tgcgtggctt ccttctccag cccacgaaac cgctgagtct
     1741 cgcagcggtg gggctccggc cggaggcgct gccttccctg acaccccccg gccggagcag
     1801 cttttctgcg cgccctcgcc cgccgaatcc gaccaggagc tcattcgccg cacctcgctc
     1861 ggcgaccgcg gcgccttcga cctgctcatc gcgcgccacg ccgaagccgt cctccgatat
     1921 ctccgcgtcc tcgcgcagtc gcaccacgac gccgaggaca tcctccagga aactctgctc
     1981 gccgcctatc gatttgcggg acaatatcgg ggcgatgcgt cgttccgcac ctggctctac
     2041 cgcatcgccg ccaatgccta ccggcaggag cgacgcaaat cgcgccgcgc gccctcccct
     2101 gtctcgctcg ggatcgatcc gccgcaaagc cccgagcaga tggccatcga ccgccagcgc
     2161 cgcgccatcc tcgatcgggt tctcggaggc cttcctgcta ccgaccgtga cgtcatcatg
     2221 ctccgcgaca tctccgatct ctccaccgaa cagaccgcgc acgcgctcgg gatcggcgtc
     2281 cccgccgtca agacgcgcct gcatcgcgcc cgcgtccggc tggcatctga gctgacgcgc
     2341 cgccgcgcga tcgcccgttg cgccggcgcc gcatgatccg ctacagcccg cgcc
//
LOCUS       DATAIQ010000818         2840 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_411861, whole genome shotgun sequence.
ACCESSION   DATAIQ010000818 DATAIQ010000000
VERSION     DATAIQ010000818.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2840)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2840)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2840
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_411861"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..547)
                     /locus_tag="VHN20_13455"
     CDS             complement(<1..547)
                     /locus_tag="VHN20_13455"
                     /inference="COORDINATES: protein motif:HMM:NF020448.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1835 domain-containing protein"
                     /protein_id="HEX2726819.1"
                     /translation="MPETLVITNGDAAVERLAAAGITGEILRWRDVLHDGPVPSLPAE
                     DLARVRTCFLTDAFAAARDDVAGSFAQRDALLAAHRDFERIEIWLEHDLYDQLQLLQI
                     LDRLAAVGRTDTVWLVQSDDYLGPMHEDAVRALVARAAPATPAQFALAARGWAAFTAT
                     TPTGLAQLLSQDLSPLPWLCPA"
     gene            complement(547..999)
                     /gene="queF"
                     /locus_tag="VHN20_13460"
     CDS             complement(547..999)
                     /gene="queF"
                     /locus_tag="VHN20_13460"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015932852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033739 - preQ1 synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preQ(1) synthase"
                     /protein_id="HEX2726820.1"
                     /translation="MNDHTLQLGRAAPLPASPDEARLDRVPNPHPDTDYVARFTAPEF
                     TSLCPVTGQPDFATLVIDYVPDRWLVESKSFKLYLGSFRNHGAFHEDCTVSIGKRLVE
                     LLEPRYLRIGGYWYPRGGIPIDVFWQTGEVPRSVWLPDPGVAPYRGRG"
     gene            1112..2395
                     /gene="eno"
                     /locus_tag="VHN20_13465"
     CDS             1112..2395
                     /gene="eno"
                     /locus_tag="VHN20_13465"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004634 - phosphopyruvate hydratase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HEX2726821.1"
                     /translation="MTAIVDVVARQILDSRGNPTVEVDVTLEDGAFGRAAVPSGASTG
                     AHEAVELRDGDKKRYGGKGVLKAVEAVNGEILDTIGGMDAENQVAIDETMIGLDGSAN
                     KARLGANAILGVSLAVAKAAAQSVGLPLYRYVGGTQARVLPVPMMNIINGGAHADNPI
                     DFQEFMVMPVGAPSLEEAVRMGSEVFHTLRGALKAAGHNTNVGDEGGFAPNLPSAEAA
                     LDFVMKAIEQAGYKPGADIVLALDCAATEFFKNGAYVYEGEGCTRKPAEQAQYLAKLV
                     GDYPIVSIEDGMAEDDWDGWAALTSAAGTRVQLVGDDLFVTNVTRLREGIAKGVANSI
                     LVKVNQIGTLTETLAAVDMAHRAGYTAVMSHRSGETEDATIADLAVATNCGQIKTGSL
                     ARSDRTAKYNQLIRIEEELGPQARYGGRAALKALR"
     gene            2571..>2840
                     /locus_tag="VHN20_13470"
     CDS             2571..>2840
                     /locus_tag="VHN20_13470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012454783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation initiator family protein"
                     /protein_id="HEX2726822.1"
                     /translation="MVVRSRVRNVLIPLALYSLAVLVVGYFVHHAHHGSRGLHAKRQL
                     KAQIHELSKELETVKNERNEWERRIALLRSDHIDRDLLEERARTFL"
BASE COUNT          484 a          972 c          986 g          398 t
ORIGIN      
        1 gcgccggaca gagccagggc aatggggaga ggtcctgcga gaggagctgc gccaggccgg
       61 tcggcgtcgt cgccgtgaag gcggcccagc cgcgcgccgc gagcgcgaac tgggcgggcg
      121 tcgccggcgc cgcgcgtgcc acgagggcgc gcaccgcgtc ctcgtgcatc gggccgagat
      181 agtcgtcgga ctggacgagc cagacggtat cggtgcgccc gacggccgcg agccggtcga
      241 ggatctgaag cagctgcagc tggtcgtaga gatcgtgctc gagccagatc tcgatgcgtt
      301 cgaaatcccg gtgcgcggcg agcagggcgt cgcgttgcgc gaagctgccg gcgacgtcgt
      361 cgcgcgccgc agcgaacgcg tcggtcagaa agcacgtgcg gaccctggcg aggtcttcgg
      421 ccggaagact cgggaccggg ccgtcatgca gtacatcgcg ccaccgcaaa atctccccgg
      481 tgatgccagc ggcggcgagc cgctcgacgg cggcatcgcc gttcgtgatc accagggttt
      541 cgggcatcag ccccggccgc gataaggcgc gacccccggg tcgggcagcc acacgctcct
      601 cggcacctcg ccggtctgcc agaacacgtc gatgggaatg ccgccgcgcg gataccagta
      661 gccgccgatg cgcaggtagc gcggttcgag aagctcaacg agccgcttgc cgatgctcac
      721 ggtgcagtcc tcgtggaagg cgccgtggtt gcggaagctg cccaggtaca gcttgaagga
      781 cttggactct acgagccacc ggtcgggcac gtagtcgatc accagcgtcg cgaaatccgg
      841 ctggcccgtc accgggcaca gcgaggtgaa ttcgggcgcg gtgaagcgcg ccacgtagtc
      901 ggtgtcggga tgcgggttgg gcacccggtc gagccgcgcc tcgtcgggag aagcggggag
      961 gggggctgcc cgtccaagtt gcagagtgtg gtcgttcatc ggggccgcct caggccaggg
     1021 cgtaacatgc accttccctt gcccgttccg gcttttcggt caataagccg ccgcgacaca
     1081 gggggccgtt gccccgccag gagccagaag aatgaccgcg atcgtcgacg tcgtcgcccg
     1141 ccagatcctc gacagccggg gcaatccgac ggtcgaagtc gacgtgaccc tcgaggacgg
     1201 cgccttcggc cgcgccgcgg ttccgtccgg cgcctcgacc ggcgcgcacg aggcggtcga
     1261 gctgcgcgac ggcgacaaga agcgctatgg cggcaagggc gtgctcaagg cggtcgaggc
     1321 ggtcaacggc gagatcctcg acaccatcgg cggcatggac gccgaaaacc aggtcgccat
     1381 cgacgagacg atgatcggcc tcgacggcag cgcgaacaag gcccgcctcg gcgccaatgc
     1441 catcctcggc gtgtcgctgg cggtggccaa ggccgcggcc cagagcgtcg gcctgccgct
     1501 gtatcgctac gtcggcggca cccaggcgcg cgtgctgccg gtgcccatga tgaacatcat
     1561 caacggcggc gctcacgccg acaatccgat cgatttccag gaattcatgg tcatgccggt
     1621 gggcgcgcca agcctcgagg aggcggtgcg catgggctcg gaggtcttcc acaccctcag
     1681 gggcgccctc aaggcggccg gccacaacac caatgtcggc gacgaaggcg gattcgcccc
     1741 caacctgccg tcggccgagg cggcgctcga cttcgtgatg aaggccatcg agcaggccgg
     1801 ctacaagccg ggcgcggaca tcgtgctcgc gctcgactgc gccgccacgg agttcttcaa
     1861 gaacggcgcc tatgtctacg agggcgaggg gtgcacgcgg aagccggccg agcaggccca
     1921 gtatctggcc aagctcgtcg gcgactaccc gatcgtgtcc atcgaggacg gcatggccga
     1981 ggacgactgg gacggctggg ccgcgctcac ctcggccgcc ggcacacggg tccagctggt
     2041 cggcgacgac ctgttcgtca ccaacgtgac gcgcctgcgc gagggcatcg ccaagggcgt
     2101 cgccaactcg atcctggtga aggtcaacca gatcggcacg ctcaccgaga cgctcgccgc
     2161 cgtcgatatg gcccaccgcg ccggctacac cgcagtgatg tcccaccgct ccggggagac
     2221 ggaggatgcg accatcgccg acctcgccgt cgccaccaat tgcgggcaga tcaagaccgg
     2281 ctcgctcgcc cgctcggacc gcaccgccaa atacaaccag ctgatccgca tcgaggagga
     2341 gctcgggccg caggcccgtt acggcggccg cgccgccctc aaggcgctgc gctagcctcc
     2401 cgaacgcaag tcgggtgttc ccgactgccg cggtcatgag cagatctcgg gaataccggg
     2461 gaaggtcggt gtgagacggc gctggccctc acccggtccg ctgccgcgga ctcgacctct
     2521 cccgcgccgc gggagagggt atgttaaccc cctcgtccta gcctcgcccg atggtcgtcc
     2581 ggagccgcgt cagaaacgtc ttgatccctc tggcgctcta cagcctcgcc gtgctcgtgg
     2641 tcggctattt cgtgcaccat gcccaccacg gcagccgcgg actgcatgcc aagcggcagc
     2701 tcaaggccca gatccacgaa ttgtccaaag agctggagac cgtgaaaaac gagcggaacg
     2761 agtgggagcg ccgcatcgcg ctgctgcgca gcgaccacat cgatcgcgac cttctcgagg
     2821 agcgcgcgcg cactttcttg
//
LOCUS       DATAIQ010000819         3446 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_457264, whole genome shotgun sequence.
ACCESSION   DATAIQ010000819 DATAIQ010000000
VERSION     DATAIQ010000819.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3446)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3446)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3446
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_457264"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..128
                     /locus_tag="VHN20_13475"
     CDS             <1..128
                     /locus_tag="VHN20_13475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018429411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HEX2726823.1"
                     /translation="EKKAREKAEAVRRARKLVRKRMQREGLLPSKPRPQPAAKPR"
     gene            259..1122
                     /locus_tag="VHN20_13480"
     CDS             259..1122
                     /locus_tag="VHN20_13480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020092402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX2726824.1"
                     /translation="MIVERIRHLATLGALAACVALAGCDTVARGGPSAGIAVLEEESK
                     ETTSANIGSLSEVIQRNPNDPSAYNTRGAAYAKVGRYNDAIADFNKAVQVDPDYAPAY
                     MNRGLAYRQTSRNDAALADFSRAIASDANYGAAYIARANLLRVQGNFPEALTDLTQAI
                     RLTPESAEALHARGLLYQRMGQHQKAILDFDAAVDRNPFVAAPYTARGQSLVAVNQHD
                     KAIEDFNAALNVDNRNAEAWAWRGVAQERLGQRQEAIESYQRAISVDPNNGTAKPGLR
                     RLQGGMATLFR"
     gene            complement(1153..1968)
                     /locus_tag="VHN20_13485"
     CDS             complement(1153..1968)
                     /locus_tag="VHN20_13485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007596276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX2726825.1"
                     /translation="MLLLVRLIGFAALLYAALLVLLVVLERTFLYPASAERVTAPEAG
                     LGDFQDLTLTTDDGERLVAWWKPPQPGRAILLYFHGNGGSLSNRRNRARLLADDGRGF
                     LIVSYRGYSGSTGTPTESGLREDARTAHAWLAKQYRPERIVLYGESLGSGVAVRLASE
                     RPVGGLVLEAPYTSTADVAKLTYWFVPVDLLMRDQFRSIEAIAQVRSPLLVLHGEEDG
                     LIPIRLGEKLYEAAPGPKRFIRLPGVGHLDALERGALEPVRAFLREVEKQTPA"
     gene            complement(2039..3436)
                     /locus_tag="VHN20_13490"
     CDS             complement(2039..3436)
                     /locus_tag="VHN20_13490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019403307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)(+) transhydrogenase (Re/Si-specific)
                     subunit beta"
                     /protein_id="HEX2726826.1"
                     /translation="MSANLAALLYLASGVLFILALRGLSHPETSRQGNLFGMVGMGLA
                     IATTLVGAPPSGFFGWILTLLGLAVGGGIGATIARRVPMTAMPQLVAAFHSLVGLAAV
                     LVAAAALYAPQAFGIGIVGAIKRGSLFEMAPGAAIGAITFTGSVIAFLKLDGRMSGKP
                     IMLPNRHIVNIGLAVLLVILLAAFIGGESRGIFWLLVLVSFALGVLLIIPIGGADMPV
                     VISMLNSYSGWAAAGIGFTLGNLALIITGALVGSSGAILSYIMCKGMNRSFISVILGG
                     FGGETAGPAGAIEQRPVKAGSAEDAAFIMKNASKVIVVPGYGMAVAQAQHALREMADQ
                     LKEHGVAVKYAIHPVAGRMPGHMNVLLAEANVPYDEVFELEDINGEFPQADVAFVIGA
                     NDVTNPSAKTDPQSPIYGMPVLDVEKAKTVLFVKRGMGSGYAGVENELFFRDNTMMLF
                     GDAKKMVDEILKSLD"
BASE COUNT          597 a         1196 c         1171 g          482 t
ORIGIN      
        1 cggagaagaa ggcccgcgag aaggcagagg cggtgcgacg ggcccgcaag ctggttcgca
       61 agcgcatgca gcgcgagggg ttgcttccgt cgaagccgcg gccccaaccg gccgcgaagc
      121 cgcgctgatc gcccctctcc cgccttgttt gcatgttgat tcggcgcctg tctgcatcag
      181 ccaggcgctg attgcgtcca gtccccggcc acggggcgcg cacacaccgc cggcggaagc
      241 cggcgatgga gacgggggat gatcgtggag agaattcggc atttggctac gctcggcgcg
      301 ctcgccgcgt gcgtcgcgct tgccggctgt gacaccgtcg cccgcggcgg tccgtcggca
      361 ggcattgcgg tcctcgagga ggagagcaag gagacgacga gcgccaatat cggctctctc
      421 tccgaggtca tccagcgcaa cccgaacgat ccgagcgcct acaacacgcg cggcgccgcc
      481 tatgccaagg tcggccgcta caacgacgcc atcgccgact tcaacaaggc ggtgcaggtc
      541 gatcccgatt acgctccggc ctacatgaac cgcggtctcg cctaccggca gaccagccgc
      601 aacgacgcgg cgctcgccga tttcagccgc gccatcgcca gcgacgccaa ttacggcgcg
      661 gcctatatcg cccgcgccaa cctgctgcgc gtacagggca attttcccga ggccctgacc
      721 gacctgacgc aggccatccg cctgacccct gaatcggccg aggcgctgca tgcgcgcggc
      781 ctgctctacc agcgcatggg ccagcaccag aaggcgatcc tcgacttcga tgccgccgtc
      841 gaccgcaatc cgttcgtcgc cgcgccctat accgcccgcg gccagagcct cgtggcggtg
      901 aaccagcacg acaaggcgat cgaggacttc aacgcggccc tcaacgtcga caaccgcaac
      961 gccgaggcgt gggcctggcg cggcgtcgcg caggagcgcc tgggccagcg ccaggaagcc
     1021 atcgaaagct accagcgcgc catttcggtc gaccccaaca acggcaccgc caagccgggg
     1081 ctccgccggc ttcagggcgg catggcaacc ctgttccggt agccgcccaa gcccttttcc
     1141 taacgcttga agctacgccg gggtctgctt ttcgacctcg cgcaggaagg cgcgcaccgg
     1201 ctccagggct ccgcgctcga gcgcgtcgag atggccgacg ccgggcagcc ggatgaagcg
     1261 cttcggtccg ggcgccgcct cgtagagctt ctcgccgagg cggatcggga taaggccgtc
     1321 ctcctcgccg tgcaagacca ggagcgggct tcgcacctgc gcgatcgcct cgatcgagcg
     1381 gaactggtcg cgcatcagaa ggtcgaccgg cacgaaccag taggtgagct tggccacgtc
     1441 cgccgtcgag gtgtagggcg cctcgaggac gaggccgccg accgggcgct cgctcgccag
     1501 ccgcaccgcc acgcccgagc cgagggattc gccatagagc acgatgcgtt ccggccggta
     1561 ctgcttcgcc agccaggcat gggccgtgcg cgcgtcctca cgcaggccgc tttccgtcgg
     1621 cgtgccggtc gagcccgagt agccgcgata gctgacgatc aggaagccgc gcccgtcgtc
     1681 ggcgagcagc cgcgcccggt tgcgccggtt cgacaggctg ccgccattgc catgaaaata
     1741 gagcaggatg gcccggcccg gctgcggcgg cttccaccag gcgacgagcc gctcgccgtc
     1801 atcggtggtg agcgtcaggt cctggaaatc gccgagtccg gcctcaggcg ccgtcacccg
     1861 ttccgccgaa gccggataga ggaaggtccg ctccaggacg acgagcagga caagcaaagc
     1921 cgcgtagagc agcgcggcga aaccgatcag gcggacgagg aggagcatgg gccccgacgg
     1981 aaagagcaaa ggccggcttt tttgagccgg gcaccacggc ggatcgagcc gctctcggct
     2041 agtcgaggct cttcaggatc tcgtcgacca tcttcttggc gtcgccgaac agcatcatgg
     2101 tgttgtcgcg gaagaacagc tcgttctcga ccccggcgta gcccgacccc atgccgcgct
     2161 tcacgaacag caccgtcttg gccttctcca cgtcgagcac cggcatgccg tagatcggcg
     2221 attgcgggtc ggtcttggcg gacgggttgg tgacgtcgtt ggcgccgatc acgaaggcga
     2281 cgtcggcctg ggggaattcg ccgttgatgt cctccagctc gaacacctcg tcgtagggca
     2341 cgttggcctc ggcgagcagc acgttcatgt gcccgggcat gcggccggcc accgggtgga
     2401 tggcgtattt caccgcgacg ccgtgctcct tgagctggtc ggccatctcg cgcagggcgt
     2461 gctgggcctg cgccacggcc atgccgtaac ccggcacgac gatcaccttg gacgcgttct
     2521 tcatgatgaa ggcggcgtcc tccgccgagc cggccttgac cggcctttgc tcgatcgcgc
     2581 ccgccgggcc ggcggtctcg ccgccgaagc cgccgaggat gacggagatg aagctgcggt
     2641 tcatcccctt gcacatgatg taggacagga tggcgcccga ggagccgacc agggcgccgg
     2701 tgatgatcag cgccaggttg ccgagggtga agccgatgcc cgccgccgcc catcccgagt
     2761 aggagttcag catcgagatc acgaccggca tgtcggcgcc gccgatcggg atgatgagca
     2821 gcacgccgag ggcgaagctg accagcacca gcagccagaa gatgccccgg ctctcgccgc
     2881 cgatgaaggc ggcgagcagg atcacgagca ggacggcgag gccgatattc acgatgtgcc
     2941 ggttcggcag catgatcggc ttgcccgaca tgcggccgtc gagcttgagg aaggcgatca
     3001 ccgagcccgt gaaggtgatg gcgccgatgg cggcgccggg cgccatctcg aacaggctgc
     3061 cgcgcttgat cgcgccgacg atgccgatgc cgaaggcctg cggagcatag agcgcagcgg
     3121 ccgccaccag caccgccgcc aggccgacga gcgagtggaa cgccgcgacc agctgcggca
     3181 tcgccgtcat gggcacgcgg cgcgcgatgg tggcgccgat gccgccgccc acggcgagcc
     3241 cgagcagcgt caggatccaa ccgaagaacc ccgacggcgg cgcgccgacg agcgtcgtcg
     3301 cgatggccag ccccatgccg accatgccga agagattgcc ctgccgcgac gtctccggat
     3361 gcgacaggcc ccgcagggcg agaatgaaca ggacgccgga ggcgagatag agcagggctg
     3421 cgaggttcgc ggacatcgcc tcaacc
//
LOCUS       DATAIQ010000820         2452 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_250058, whole genome shotgun sequence.
ACCESSION   DATAIQ010000820 DATAIQ010000000
VERSION     DATAIQ010000820.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2452)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2452)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2452
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_250058"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            147..1505
                     /gene="hmgA"
                     /locus_tag="VHN20_13495"
     CDS             147..1505
                     /gene="hmgA"
                     /locus_tag="VHN20_13495"
                     /EC_number="1.13.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015927894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004411 - homogentisate 1,2-dioxygenase
                     activity [Evidence IEA];
                     GO_process: GO:0006559 - L-phenylalanine catabolic process
                     [Evidence IEA];
                     GO_process: GO:0006572 - tyrosine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homogentisate 1,2-dioxygenase"
                     /protein_id="HEX2726827.1"
                     /translation="MNVQDAKTFERESRSGQGALTAGYMSGFGNGFETEALPGALPMG
                     RNSPQKCAYGLYAEQLSGSPFTAPRATNERSWLYRIRPTVAHWGQFAKVDAGLWRTAP
                     CHEVDVPLAPLRWDPIAIPDESLSFVAGGVRTITVAGDAGAQAGMGAHVYLVTRSMQD
                     EYFYNADGEMLLVPQQGGLRLWTEFGIIDIAPGEVAVIPRGVKIRVELTNGPARGYLC
                     ENYGGAFSLPERGPIGANCLANPRDFLTPVAAYEDRDGPARMVVKCGGNLWAAALAHS
                     PLDVVAWHGNYAPYKYDLRNYSPVGPVLFDHADPSIFTVLSSPSETPGTANVDFLIFP
                     DRWLVAENTFRPPWYHMNVMSEFMGLIYGQYDAKPHGFVPGGASLHNSMLPHGPDADA
                     FESASNAELAPHRLENTLAFMFETRFPQRVTAYAMQCDAFQKSYGAYGRRLQKHFDPG
                     QP"
     gene            1607..>2452
                     /locus_tag="VHN20_13500"
     CDS             1607..>2452
                     /locus_tag="VHN20_13500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009492711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEX2726828.1"
                     /translation="MTSANGHLDFPIQNLPLGVFSPRGSALRRGGVAIGDMIFDLRVA
                     AEAELFTGAARDAAEKASSWALNAVLALGTEPRRALRQQLVDILDVAAPGGAPSEDLY
                     RRLLHPMDECVLYLPAHIGDYTDFYAGIHHATNVGKQFRPDNPLLPNYKHVPIGYHGR
                     ASSIVPSGTPIRRPWGQSKPADAAEPSFAPSRRLDYELELGIWIGPGNELGEPIPVAD
                     ADRHIAGFCLLNDWSALDVQAWESQPLGPFLSKSFATTISPWIITPEALAPFAMAQAR
                     RPQDDP"
BASE COUNT          402 a          859 c          790 g          401 t
ORIGIN      
        1 agatccgccg cggcgtgctg aagccggcag acaatggcag gatcggctca ggttgaggcg
       61 ttgctgcgcc tctgttcggc gatagcgcgc gccgcggatc actgcggcgg gcttcgccgg
      121 atcatgctcg tgaggagaag cgcgtcatga acgtccagga tgccaagact tttgaacgcg
      181 agagccgctc gggccagggc gcgctgacgg ccggctacat gtcgggcttc ggcaacggtt
      241 tcgagaccga ggcgttgccg ggcgcgctgc cgatggggcg caactccccg caaaaatgtg
      301 cctacggact ttatgccgaa cagctcagcg gctcgccgtt cacggccccg cgcgccacta
      361 acgagcgctc gtggctgtat cgcatccgcc cgacggtcgc gcattggggt cagttcgcga
      421 aagtcgatgc cggcctgtgg cgcacggccc cctgccacga ggtcgatgtg ccgcttgccc
      481 cgctgcgctg ggatccgatc gccattcccg acgagagcct gtcgtttgtc gcgggcggcg
      541 tccgcaccat caccgtcgcc ggcgacgcgg gcgcgcaggc tggcatgggc gcgcatgtct
      601 acctcgtcac ccgatcgatg caggacgaat atttctacaa cgccgatggc gagatgctgt
      661 tggtgccgca gcagggcggg ctgcggctgt ggaccgagtt cggcatcatc gacatcgcgc
      721 ccggcgaggt cgccgtgatc ccgcgcggcg tgaagatccg cgtcgagctg acgaacgggc
      781 cggcacgcgg ttacctgtgc gagaactatg gcggcgcctt ttcgctgccg gagcgggggc
      841 cgatcggcgc caactgcctc gccaacccgc gcgacttcct gacgcccgtt gccgcctacg
      901 aggaccgtga cggcccggcg cgcatggtgg tcaaatgcgg cggcaacctg tgggcggccg
      961 cgctcgcgca ttcgccgctc gacgtggtcg cctggcacgg caactacgcc ccctacaaat
     1021 acgacctgcg taattactca cccgtcggcc cggtcctgtt cgaccacgcc gacccgtcga
     1081 tcttcacggt gctgagctct ccctccgaga cgcccggcac tgccaacgtc gacttcctga
     1141 tttttcccga ccgctggctc gtcgccgaga acacgttccg gccgccgtgg taccatatga
     1201 acgtgatgag cgagttcatg ggcctgatct acggccaata tgacgccaag ccgcacggct
     1261 tcgtgccggg cggcgcctcg ctgcacaaca gcatgctgcc gcacggcccg gacgcggacg
     1321 ccttcgaaag cgccagcaat gccgagctcg ccccacaccg cctcgaaaac acgctggcat
     1381 tcatgtttga gacgcgcttc ccgcagcgcg tcaccgccta cgccatgcaa tgtgacgcgt
     1441 tccagaagag ctatggcgcc tacggccggc gcttgcagaa acatttcgat ccgggccagc
     1501 cttagaccag aggaggagag caggatcgat tcactccgaa gcgatcccgt tcgcgcacgc
     1561 gatggcgcag attgacgcga cgcatgaccc gaggcgccag agttgggtga cctccgccaa
     1621 cgggcacctg gatttcccga tccagaacct gccgctcggc gtgttctcgc cacgcggcag
     1681 cgcgctgcgt cgcggcgggg tggcgatcgg cgacatgatc ttcgatctgc gcgtcgcggc
     1741 cgaggcggaa ctcttcaccg gcgcggctcg cgacgcggcc gagaaagcgt cgtcgtgggc
     1801 gctcaacgcc gtactcgccc tcggcaccga gccgcggcga gccttgcgcc agcaactcgt
     1861 cgatatcctc gacgtggccg cgccgggcgg cgccccgtcg gaggaccttt accggcggct
     1921 gctgcatccg atggatgaat gcgtgctgta tttgccggcg catatcggcg actacaccga
     1981 cttctatgcg ggcattcacc acgccaccaa tgtcggcaag caattccggc ccgacaatcc
     2041 gctgctgccc aactacaagc acgtgccgat cggctatcac ggccgcgcct cgtcgatcgt
     2101 gccctccggc acgccgatcc gccggccgtg gggacaatcc aagccggccg atgcagccga
     2161 gccgagcttc gcgccgagca ggcggctcga ctacgagctc gagctcggca tctggatcgg
     2221 gcccggcaac gagctcggcg agccgatccc cgtggccgac gccgatcgcc acatcgccgg
     2281 attctgcctc ctgaacgact ggtcggcgct cgacgtgcaa gcctgggaat cgcagccgct
     2341 cggcccattc ctgtcgaaga gtttcgcgac gacgatttcg ccatggatca tcacgcccga
     2401 agcgctggcg ccattcgcga tggcgcaagc gcgccggccg caggacgatc cc
//
LOCUS       DATAIQ010000821         5648 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_412209, whole genome shotgun sequence.
ACCESSION   DATAIQ010000821 DATAIQ010000000
VERSION     DATAIQ010000821.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 5648)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5648)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5648
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_412209"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..753
                     /locus_tag="VHN20_13505"
     CDS             <1..753
                     /locus_tag="VHN20_13505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726829.1"
                     /translation="LRLFRNDPRIRFEGIIYETVRESVEAVCLADRRLIRDTSVCIEH
                     VGYDGDQSLKHRRNLALLRRAVADRPDSAFYWSRLAETLAALGERDAAVVAARNAVAI
                     VRANDCRDEDPTVTVAYQTLAALSAEAIEDRLAVIEEGLRAFPDNFALRLARARGLID
                     TGCLTDALAIIDGLVAIDPEAIRPYCAGHDVRIFGEFAHDLRGMALVRLERFAEAAAA
                     FEAAAAAAPHELSYRAKAAAMRGHAMRTTPGA"
     gene            complement(762..1892)
                     /locus_tag="VHN20_13510"
     CDS             complement(762..1892)
                     /locus_tag="VHN20_13510"
                     /inference="COORDINATES: protein motif:HMM:NF026257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HEX2726830.1"
                     /translation="MDHQPMPRRASIELLGRCLAFRRDPGEHAALREQLFASPTLWGE
                     LTDLAVHEDLAQPLEQSLRACALLPSQFVPAHAGAEAADCGLIGAAMARGQRREALAR
                     ELREVLARLNRVGIAPIVIKGAQSLLTGEPAWRSMADFDLLAPDRAEEAQAQLMAMGY
                     SVPDGYAERTQRHHLPPLLRDGCGAAIEIHRRSGNQYVRTLLPTRELADASIPGSQDG
                     VRFRLLPLPLHVLYGVVHNHVGHAGDARGNIILRSLYEFAWDMSRMGEPDRIALKARA
                     DRHPRLGAALDMWIAAAAELFRLPVEAPFAVRDDAVRRWKGTLARIGQPRPWYKYPGY
                     PDEIRMGLAAHRVRAAPGGAHLPGRMWTRTRVIRSFFPRFAK"
     gene            2141..2758
                     /locus_tag="VHN20_13515"
     CDS             2141..2758
                     /locus_tag="VHN20_13515"
                     /inference="COORDINATES: protein motif:HMM:NF015961.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF374 domain-containing protein"
                     /protein_id="HEX2726831.1"
                     /translation="MAAAGAVLAAYLWLCRSTSRLVWLRPPPQAWGKEAVVLASWHGR
                     LWACGLARPPNGVTRCLVSSHRDGRLMGAIAGWFGLEPVFGSSRRGGLSALVALTRTL
                     REGGNVAIAPDGPVGPRRRARPGAVRLADSCGVPLLPCAVSARRVIELQSWDRLLFPL
                     PFTTLYLVVGEPLATPSPTLLTLTLDELQHAVDVAAGRLPEAAAT"
     gene            2761..3540
                     /locus_tag="VHN20_13520"
     CDS             2761..3540
                     /locus_tag="VHN20_13520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018701146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004721 - phosphoprotein phosphatase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-protein phosphatase"
                     /protein_id="HEX2726832.1"
                     /translation="MPPPARLARKYQRRERRIARWRQPLTTRGRRLRAWLSMLLADHG
                     VLRFVFPNRHKVSDKLWRSAQPLPRDIAWAAQNGIRTVINLRGGREFGCWPLEREACE
                     RHGIRLIDMPLHARGVPRVEAIRWARELFDTIAYPALMHCKSGADRTGLAAALYLLLH
                     EKRPLGEATAQLHRRFGHLRSTATGVLDAFFEAYARDAEAAAARGAELDFLDWVERIY
                     DPAALRASFVPASRLTRARMRWQNWRLGLPRAAQAARRSPD"
     gene            complement(3513..4247)
                     /locus_tag="VHN20_13525"
     CDS             complement(3513..4247)
                     /locus_tag="VHN20_13525"
                     /inference="COORDINATES: protein motif:HMM:NF016974.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartyl/asparaginyl beta-hydroxylase
                     domain-containing protein"
                     /protein_id="HEX2726833.1"
                     /translation="MKLDYHIFKSAVNAYFDRYTGGADRPTFFDIRATCPELDAVTAA
                     YPTIKAEFDRLPISPEALPQYHEIDPGEVKISNTTPKRWTVFMLEILGHRLEANRALC
                     PETSRLLDRVPNLIQAFISILEPGKSVPEHEGPYRGYLRYHLGLRVPKHNPPKLVVNG
                     QDYVWKEGEAVMFDDSWPHAVVNDSSETRAVLIVDIRRPLPAIPDRINRFVTDVAARH
                     TYGRKVARTAQQFAAGAAQSGERRAA"
     gene            4299..>5648
                     /locus_tag="VHN20_13530"
     CDS             4299..>5648
                     /locus_tag="VHN20_13530"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HEX2726834.1"
                     /translation="MTSRIDSWASHRVIDAAPAAQAAPARSGLIRDRFDALALVLIVG
                     HGLYWTLMPALTTGTFALDTGEALFWGREWQLGYYKHPPLMAWLAESGVAVFGRSLVA
                     VYLVPQLCVAAAFAAMWWLARRLVSSAGALLALAALMLVLPFTVGSPTFNANIALLPF
                     WAWTIAFAWDALERNEAWRWLRLGLVVGLGFLAKYAILILCAAIALYCLRTPSRRWVL
                     RARGPWLAVAAAVLVASPHLYWLLREDELPLAYATASKAVTAISEALPQFGLFVAHQG
                     LIYLPLLVVAALWAIASGRRIGVVRVSRDGVDRQPLRFLLFAGFAPVVVTVAAALATR
                     QKPPMSWGDCFPIVAGLLACLAWPWLARDLAEGRAPRAAPGAFAALVLALWAAPPVRL
                     LAWAGVGLAPPKTAFDGAAHGAILDAFWAQRRQQPLRYQVSHFGDADDRALGSSTAFF
                     "
BASE COUNT          720 a         1979 c         2004 g          945 t
ORIGIN      
        1 ctgcggctct tccggaacga tccgcgcatc cgcttcgagg gcatcatcta cgagaccgtg
       61 cgcgaaagcg tagaggcggt ttgtcttgcc gaccggcgcc tgatccgcga cacgtccgtt
      121 tgcatcgagc atgtcggcta tgacggcgat cagagcctca agcaccggcg caatctcgcg
      181 cttctgcgcc gcgccgtggc ggatcggccg gacagcgcct tctattggag ccgcctcgcc
      241 gagacgctcg ccgcgctcgg cgagcgcgac gcggccgtcg tggccgcgcg caacgccgtc
      301 gcgatcgttc gtgccaacga ctgcagggat gaggacccga ccgtcaccgt cgcgtatcag
      361 acgctcgcgg cgctgtcggc ggaggccatc gaggatcggc tcgcggtcat cgaggaaggc
      421 ctcagggcat tccccgacaa cttcgctctg cggctggcgc gtgcgcgggg gctgatcgac
      481 acaggctgct taacggacgc gcttgccatc atcgacggtc tggtggcgat cgacccggaa
      541 gcgatccgcc cctactgcgc gggccatgat gtgcgcatct tcggcgagtt cgcccatgac
      601 cttcgcggca tggcgctggt gcgcctcgaa cgtttcgccg aggcggcggc cgcgttcgag
      661 gccgcggcgg cggcggcgcc gcacgagctg tcgtatcgcg ccaaggctgc cgcgatgcgc
      721 gggcacgcga tgcgcacgac gccgggtgcg tgagcatcac gctatttggc gaagcgcgga
      781 aagaacgagc ggatcactct cgtgcgcgtc cacatgcggc cgggcagatg ggcgccgccc
      841 ggcgcggcgc gtacccggtg cgccgcgagc cccatgcgga tctcgtcggg atagcccgga
      901 tatttgtacc agggccgcgg ctggccgatg cgcgccagcg ttcccttcca tctgcgcacg
      961 gcgtcgtcgc gcaccgcgaa cggcgcttcg accggcaggc ggaacagctc cgcggcggct
     1021 gcgatccaca tgtcgagggc ggcgccgagc cgcggatgac gatcggcgcg cgccttgagc
     1081 gcgatgcgat ccggctcgcc catgcggctc atgtcccagg cgaattcata gaggctgcgc
     1141 aggatgatgt ttccgcgcgc gtcgccggcg tggccgacgt ggttgtggac gacgccgtag
     1201 agaacatgca gcggcaacgg caggagccgg aaacgcacgc cgtcctgtga tccggggatg
     1261 cttgcatcgg ccagctcccg cgtcggaagc agcgtgcgga catattgatt tcccgagcgc
     1321 cggtggatct cgatcgcggc gccacagccg tcgcgcagga gcggcggcag atggtggcgc
     1381 tgcgtgcgct cggcgtagcc gtcgggaacg ctgtagccca tggccatgag ctgcgcttgc
     1441 gcctcctcgg cgcggtcggg cgccagcagg tcgaaatccg ccatcgagcg ccacgccggc
     1501 tcgccggtga gcagcgactg cgcgcccttg atgacgatcg gcgcgatgcc gacgcggttc
     1561 agccgggcca ggacctccct cagctcgcgc gcgagtgcct cccgccgttg cccgcgggcc
     1621 atggccgcgc cgatgagccc gcaatctgcg gcttccgcgc cggcatgcgc cggcacgaac
     1681 tgcgatggca gcagggcgca cgcgcgcagg ctttgctcga gcggctgggc gaggtcttcg
     1741 tgcaccgcga gatcggtcag ctcgccccac agcgtcggcg acgcgaacag ctgctcgcgc
     1801 agcgcggcgt gttcgccggg gtcgcggcgg aacgcgaggc agcggccgag cagctcgatc
     1861 gaggcccgcc gcggcatggg ctggtggtcc attgctatgt cccccctcgg ccatgataga
     1921 aagcttcacg ggcgcgtgcc aatggcccac gccaagccag gcgacgcgtc tcccgtaagg
     1981 aagggttgcg atcgtcgtgg tcgagtgggc agccgccggg aaacaggccg cggatggggc
     2041 ggcgtcggcc tccgtcgcgg cggccgaatc tgtgcggcgc gccggcccgc ccgccgcgct
     2101 ccaggggcaa ccgggcgccc gccgggtgga gccgctgctg gtggcggcag ccggtgcggt
     2161 gctggccgcc tatctgtggt tatgccggag cacgagccgt ctcgtctggc ttcgcccgcc
     2221 gccgcaggca tggggcaagg aagcggtcgt gctggccagc tggcatggcc gcttgtgggc
     2281 ctgcggcctg gcgcggccgc cgaacggcgt gacgcgctgc ctcgtctcca gccaccgcga
     2341 cggccgcctc atgggcgcga tcgccggctg gttcgggctg gagcccgtct tcggttcatc
     2401 gcgccgcggc ggtctctccg ctttggttgc gctcaccagg acgctgcgcg agggcggcaa
     2461 cgtcgcgatt gcgcccgatg gtcccgtcgg cccgcgccgc cgcgcccgtc cgggcgcggt
     2521 gaggctcgcc gacagctgcg gcgttccgct gttgccgtgc gccgtcagcg cgcggcgcgt
     2581 gatcgagctc cagtcgtggg accggctgct gtttccgctg cccttcacca cgctctacct
     2641 tgtcgttggc gagccgctcg cgacgccttc gccgacgctg ctcacgctca cgctcgacga
     2701 gctgcagcac gccgtcgatg tcgcggcagg gcgcctgccg gaagcggccg cgacctgacg
     2761 atgccgccgc cagcccggct cgcccgcaaa taccaacgtc gcgagcggcg catcgcgcgc
     2821 tggcgacaac cgctgacgac gcgcggtcgc cgcctgcgcg cctggctcag catgctgctc
     2881 gccgaccacg gtgtcctgcg gttcgtcttt cccaaccgtc acaaggtcag cgacaagctg
     2941 tggcgatcgg cgcagccgct gccgcgcgac atcgcctggg cggcgcagaa cggcatccgc
     3001 acggtgatca atctgcgcgg cggccgtgaa ttcggctgct ggccgctcga gagggaagct
     3061 tgcgaacgtc acggcatccg cctcatcgac atgccgcttc acgcgcgcgg cgtgccgcgc
     3121 gtcgaggcga tccgctgggc gcgcgaactg ttcgacacga tcgcgtatcc ggcgctgatg
     3181 cattgcaagt ccggcgccga ccggacgggg cttgcggcgg cgctgtacct gttgctgcac
     3241 gagaaacgcc ccctcggcga ggcgaccgcg cagctgcacc ggcgtttcgg gcacctccgc
     3301 tcgaccgcca ccggcgtgct cgacgcgttc ttcgaagctt atgcgcgcga tgcggaggct
     3361 gcggccgcgc gcggcgccga gctggacttc ctcgactggg tcgagcgcat ctacgatccg
     3421 gccgcgctca gggcgagctt cgtgccggct tcgaggctga cacgggcgag gatgcgctgg
     3481 cagaactggc ggctcgggct gccacgcgcc gctcaggcgg cgcgccgctc tcccgactga
     3541 gccgcccccg cggcgaattg ctgggccgtg cgcgccacct tgcgcccata ggtgtggcgc
     3601 gcggcgacgt cggtgacgaa gcggttgatg cggtccggga tggccggcag cggccgccgg
     3661 atatcgacga tcaggaccgc ccgcgtctcg ctgctgtcgt tgaccaccgc gtgcggccag
     3721 ctgtcatcga acatcacggc ctcgccctct ttccagacat agtcctgacc gttcacgacc
     3781 agcttcggcg ggttgtgctt gggaacgcgc agcccgaggt ggtagcgcag gtagccgcgg
     3841 taagggcctt cgtgctcggg aaccgacttg cccggctcca ggatcgagat gaaggcctgg
     3901 atcaggttag gcacccggtc gagcaggcgg ctcgtctccg ggcagagcgc gcgattggcc
     3961 tccagccggt ggccgaggat ctcgagcatg aacaccgtcc agcgcttcgg cgtcgtgttc
     4021 gagatcttga cctcgcctgg atcgatctcg tggtattgcg gcagcgcctc cggcgagatc
     4081 ggcagacggt cgaactccgc cttgatggtc ggataggcgg ccgtcacggc gtcgagctcg
     4141 gggcaggtgg cccggatgtc gaagaaggtc gggcgatccg cgccgcccgt atagcggtcg
     4201 aaataggcgt tcaccgccga tttgaagatg tgatagtcaa gcttcacgga gaatctccgg
     4261 gcaaaaggtc ggcgtttttt taacccactt gcagggggat gacgagccga atcgattcct
     4321 gggcgtcgca tcgcgtcatc gacgcggcgc cggcggcgca ggcggcgccc gcgcgctccg
     4381 gcctgatccg cgaccgattc gacgccctcg cgctcgtgct gatcgttggc cacgggctct
     4441 actggaccct catgccggcg ctgacgaccg gcacgttcgc cctcgacacg ggcgaggcgc
     4501 tgttctgggg ccgcgagtgg cagctcggct actacaagca cccgccgctg atggcctggc
     4561 tcgccgagag cggcgtcgcc gttttcggac gctccctggt cgcggtctat ctggtcccgc
     4621 agctttgcgt ggccgcggcc ttcgccgcca tgtggtggct tgcccggcgg ctggtgtcgt
     4681 cggccggggc gttgctggcg ctcgccgccc tcatgctggt gcttcctttc accgtcggct
     4741 cgccgacctt caacgccaat atcgcgctgc tgccgttctg ggcctggacc atcgccttcg
     4801 cctgggacgc gctcgaacgg aacgaggcgt ggcggtggct gcgcctcggc ttggtcgtcg
     4861 ggcttgggtt cctcgccaaa tacgcaatcc tgatcctgtg cgccgcgatc gcgctctact
     4921 gcctgcggac gccgtcgcga cgctgggttc ttcgcgctcg cggcccgtgg ctcgccgttg
     4981 ccgccgctgt tctggtggcc tcgccgcacc tctattggct tcttcgtgaa gacgagctcc
     5041 cgcttgccta cgcgaccgct tccaaagccg tgaccgcgat aagcgaggcg cttccgcagt
     5101 tcggcctgtt cgtcgcgcac cagggtctga tctacctgcc gctgctcgtg gttgctgcgc
     5161 tgtgggcgat cgcctccggg cgccgcatag gcgtcgtgcg cgtgtcgcgc gacggcgtcg
     5221 accggcagcc gctccggttc ctgctctttg ccggctttgc ccccgtcgtc gtgactgtcg
     5281 ccgcggcatt ggcgacccgg cagaagccgc cgatgagctg gggggactgc tttcccatcg
     5341 tggccggcct gctcgcttgt ctcgcctggc catggctcgc gcgtgacctg gccgaagggc
     5401 gggcgccgcg cgcggcgcct ggcgccttcg ctgcgctcgt gcttgctctg tgggcagcgc
     5461 cgcccgttcg cctgttggcg tgggcgggcg tcgggttggc gccgccgaaa acggctttcg
     5521 acggtgccgc gcacggcgcc atcctcgacg ccttctgggc gcagcgccgt cagcagccgc
     5581 tgcgctacca ggtgagccat ttcggcgacg ccgacgaccg cgcccttggc agcagcaccg
     5641 ccttcttc
//
LOCUS       DATAIQ010000822         2362 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_158197, whole genome shotgun sequence.
ACCESSION   DATAIQ010000822 DATAIQ010000000
VERSION     DATAIQ010000822.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2362)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2362)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2362
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_158197"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            187..699
                     /gene="cueR"
                     /locus_tag="VHN20_13535"
     CDS             187..699
                     /gene="cueR"
                     /locus_tag="VHN20_13535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015927536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0006878 - intracellular copper ion
                     homeostasis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Cu(I)-responsive transcriptional regulator"
                     /protein_id="HEX2726835.1"
                     /translation="MNIGQASDASGVSAKMIRYYESIDLIPRSARRDSGYRDYGPADI
                     HRLAFIRRARDLGFSIDQIRDLLRLWSDGRRSSAEVKAIALEHVDELKQRARRLNEMA
                     DALKHLAAACEGDSRPECPIIKGLEGKLAIDLHATHVATCNGEPRPSPASRRKVKSGT
                     KARSRAAGHA"
     gene            696..1169
                     /locus_tag="VHN20_13540"
     CDS             696..1169
                     /locus_tag="VHN20_13540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726836.1"
                     /translation="MILPYVRLAVVFLVLNLIWELLQLPLYTIWWSEPWPRIAFALFH
                     CTLGDLLIGAVAFTFALVITGRRWPADRLARRRVVILTTLAGVAYTMFSEWLNVEARQ
                     TWAYTEVMPRLPFVGTGLTPLLQWLLLPGVAIRFVAAVAVPAVPAVPEQMHERAK"
     gene            complement(1074..1283)
                     /locus_tag="VHN20_13545"
     CDS             complement(1074..1283)
                     /locus_tag="VHN20_13545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015821579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2933 domain-containing protein"
                     /protein_id="HEX2726837.1"
                     /translation="MVRTPLGWGITVAFAALGAYLLATHSGHILSALPYLLLLLCPLM
                     HLFGHGGHGGHGHGRHEPDRDTRQQ"
     gene            1617..2159
                     /locus_tag="VHN20_13550"
     CDS             1617..2159
                     /locus_tag="VHN20_13550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011440698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HEX2726838.1"
                     /translation="MKEWIAVLKAADAAARWHVHDRRKGAAEEPYINHLLEVASLVAE
                     ATDGKDPNLVIAALLHDAIEDQEVPRDMIAETFGEDVARLVEELTDDKTLDQKARKRA
                     QVEHAPHKSQRAKIIKLADKTSNVRGITASPPSDWSVKRRLDYVKWGREVVAGLRGAN
                     AWLEQEFEKAAAAAEESLRP"
BASE COUNT          407 a          779 c          769 g          407 t
ORIGIN      
        1 cgtgatgatg atcgtggcca tgcccgtgag gggccgagcc tgcgctctcc ttggcgtctg
       61 ctttggcgcg gcgggtatct cgttggtcgg ccatcatggc ctcctgactt cagtccggtg
      121 tcactagccg gtttgcctac accttcccac ggtggtaagg tcaacagcat atgtgaaagt
      181 gcagccatga atatcggtca ggcctcggac gcctcgggcg tctcggccaa gatgatccgc
      241 tactacgaga gcatcgatct gatcccgcgc tcggccagac gcgacagcgg ataccgcgat
      301 tacgggccgg ccgacatcca tcgcctggca ttcatccgcc gtgctcgcga ccttggcttc
      361 tcgatcgacc agatccgcga cctcctgcgc ctgtggagtg acggccgccg cagcagcgcc
      421 gaggtcaagg ccatcgcact cgaacacgtc gacgagctca agcagcgtgc gcgccgtctc
      481 aacgaaatgg ccgatgctct caagcacttg gccgcggcct gcgagggcga cagccgtccg
      541 gagtgtccca tcatcaaggg tctcgaaggt aaactggcga tagacttgca tgcgacccac
      601 gtcgctacat gtaacggcga gcctcgcccc tctccggcaa gccgaaggaa agtgaaatcg
      661 ggaacgaagg cccggtcgcg cgctgccggt cacgcatgat cctgccttac gtacggctcg
      721 cggtcgtttt cctggtcctg aacctcatct gggagctcct gcagcttccg ctttacacca
      781 tctggtggtc ggagccgtgg ccgcgaattg cgttcgcgct tttccactgc acgctcggcg
      841 acctgctgat cggcgccgtt gcattcacct tcgcgctcgt catcaccggg cgtcgttggc
      901 ccgccgacag gctggcgcga agacgcgtcg tgatcctcac cacccttgca ggcgtcgcct
      961 ataccatgtt cagcgagtgg ctgaacgtcg aagcccgcca aacctgggct tacacggagg
     1021 tgatgccgcg actgcccttc gtcggcaccg gactgacgcc actcctgcag tggctattgt
     1081 tgcctggtgt cgcgatcagg ttcgtggcgg ccgtggccgt gcccgccgtg cccgccgtgc
     1141 ccgaacagat gcatgagcgg gcaaagtaga agaagaaggt acggcagcgc gctcaggatg
     1201 tgccccgaat gggtggcgag cagatacgcg ccaagggccg caaaggcgac cgtgatcccc
     1261 caaccaagcg gggtgcggac cagtttggag cgccagtcgc tccgttcaac gacatgctgg
     1321 gtgggcggca tagcagcttc tcctcgctgg ctcaggttgg ctcgctttcc gttcgccgcg
     1381 ttgatccagg tcaagcggcg gacgcggcct gcagcgtcgc gttgcgaagt cgggatcctc
     1441 cgcgaggcgg cgccctgcga tgcgggcggt gacttaggat ttaccgggcg gcctgagcgg
     1501 cagcctgtgc ggcgttgcct ttgtcggcgt tgcctttgtc ggcgtggcgc gttttgtggg
     1561 gcgagccgcg cgccgggaaa tctgcgatcg ggtcaatcac acgcgaagga aacacgatga
     1621 aagaatggat cgccgtcctc aaggcggccg acgccgctgc gcgctggcat gtgcatgacc
     1681 gccgcaaagg cgcggccgag gagccctata tcaaccacct gctcgaggtc gcctcgctcg
     1741 tcgccgaggc gaccgacggc aaggacccga acctcgtgat cgcggcgctg ctgcacgacg
     1801 ccatcgagga ccaggaggtg ccgcgcgaca tgatcgcgga aacctttgga gaggacgtgg
     1861 cgcgcctcgt cgaagagctc accgacgaca agactctcga tcagaaggcg aggaagcgtg
     1921 cccaggtcga gcacgccccg cacaagtcgc agcgcgccaa gatcatcaag ctggccgaca
     1981 agaccagcaa cgtgcgcggc atcacggcga gcccgccgtc cgactggtcg gtcaagcgcc
     2041 ggctcgacta cgtcaaatgg ggacgcgaag ttgtcgccgg gctgcgcggc gccaacgcgt
     2101 ggctcgagca ggaattcgaa aaggccgccg ccgctgccga agaatcgctg cggccataac
     2161 cgcacgcgcc agccctctcc ccgcttgcgg ggagaggcga ctcgcgaagc gagcgggtga
     2221 ggggcggatc aggatgtgcc ctatccccac cgccccctca ccttcgctcc gctgcgcttc
     2281 gcttgcctcg gacccggcaa ggggtcctcg gccctctccc cgcaagcggg gagaggggtt
     2341 agcggtcact tctgcacgtg cg
//
LOCUS       DATAIQ010000823         3679 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_42578, whole genome shotgun sequence.
ACCESSION   DATAIQ010000823 DATAIQ010000000
VERSION     DATAIQ010000823.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3679)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3679)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3679
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_42578"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(259..1641)
                     /locus_tag="VHN20_13555"
     CDS             complement(259..1641)
                     /locus_tag="VHN20_13555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018259685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase family protein"
                     /protein_id="HEX2726839.1"
                     /translation="MTFSALDSQILGPLFASDEMRAVFGDRARLAAMLRVEAALAWAQ
                     SRFGMVPEELPAAIKALRAEKLDIADIGAQTVLAGVPTIPFVKAVQAKLPKEVEPYFH
                     KGATTQDVVDTALVLQMRDAFALIAGELDAILDGLAGLAREHRQTPCVGRTYGQHAAP
                     VTFGYKVGVWAAGIAEVADQLPWLRERALVVSLGGPVGTFTAAGAQGPAVVEAFAEEL
                     GLGTTPVTWHTLRARMVDTGAWLATLMGALAKMATDVVHLASTEVGEVAEPYVPGRGG
                     SSAMPHKRNPVSATVILAAHAAGKGHVGTLHDAMAASHERPAGPWHAEWQALPQLFGL
                     VSGSLREARTLATGLMVDASRMRQNIDATRGLLFADAVAARLAPKLGRHRAHRLVEDA
                     AGKVRTGGAPLRDVLASDPHFTADVPAEALNAAFDLAPSIESAGAWVDRALGEIARVR
                     TRLAVTAQAS"
     gene            complement(1658..2839)
                     /gene="pobA"
                     /locus_tag="VHN20_13560"
     CDS             complement(1658..2839)
                     /gene="pobA"
                     /locus_tag="VHN20_13560"
                     /EC_number="1.14.13.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012977735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018659 - 4-hydroxybenzoate
                     3-monooxygenase activity [Evidence IEA];
                     GO_process: GO:0018874 - benzoate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoate 3-monooxygenase"
                     /protein_id="HEX2726840.1"
                     /translation="MRTQVGIVGAGPAGLFLSHLLHREGIASVIVEDRSRKYVEERIR
                     AGVLEQGTADLMVETGVGERMRREGLVHHGIELRFKGKGHRIDFAELANGQGVTVYGQ
                     HEVVKDLIAARLGAGGEIVFEARDVSVHDLDGPTPKIRFVKDGEPREVACDVIAGCDG
                     FHGICRPSIPAGVLTTFERVYPFAWLGILARAQPVSHELIYAHHERGFALFSMRTPQI
                     SRLYIQCAPDEDIGAWPDARIWAELKTRLDGGSDWALTEGPVLQKGITGMRSFVVEPM
                     QYGRLFLAGDAAHIVPPTGAKGMNLAVADVRVLARALTEFYRAGRTDLLARYSETCLR
                     RVWKAQRFSWWMTSMLHRHDDASPFDHRRQIAELDYVTSSRAAATALAENYVGLPMEW
                     A"
     gene            complement(2870..3481)
                     /gene="pcaG"
                     /locus_tag="VHN20_13565"
     CDS             complement(2870..3481)
                     /gene="pcaG"
                     /locus_tag="VHN20_13565"
                     /EC_number="1.13.11.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018644350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018578 - protocatechuate 3,4-dioxygenase
                     activity [Evidence IEA];
                     GO_process: GO:0046278 - 3,4-dihydroxybenzoate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protocatechuate 3,4-dioxygenase subunit alpha"
                     /protein_id="HEX2726841.1"
                     /translation="MTEKKAAKALGISPSQTVGPFFAYCLTPRAYGYAEVVTSDLVTE
                     DAAGDRIRIEGRVFDGDGQPVPDAMVEIWQADGQGRYAHSADRRALPNARFKGFGRSG
                     TDAEGRYRFTTIKPGQVPGPNGGTQAPHVNVNVFARGMLRHAFTRIYFEGEAANAADP
                     ILTLVPEDGRGTLIAKRTTQGGEPTYTFDIRLQGKNETVFFEA"
     gene            complement(3474..>3679)
                     /locus_tag="VHN20_13570"
     CDS             complement(3474..>3679)
                     /locus_tag="VHN20_13570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002712829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="protocatechuate 3,4-dioxygenase subunit beta"
                     /protein_id="HEX2726842.1"
                     /translation="ITQMYFPGDPLFAYDPIFNSIADAAARERLISKFDLETTQPEWA
                     LGYKFDIVLRGRSATPFEEPHDD"
BASE COUNT          554 a         1263 c         1320 g          542 t
ORIGIN      
        1 cggaagcggt cggcaaaggc gcgcgcctgc gcgtcccaca tctcgagcgt ggcgccgacc
       61 gagttcgaga acacgacgac cggcgcgtcc tccggtccgg tgaggtcata gaacagctca
      121 acgccgttgg cgcgaatggt cggcatggta ctgacgctcc tggagcatga tccggcgaag
      181 tggctaccac ttcgccgaaa agatcatgcg gctcaacagg gaatagagcg ggatcgattc
      241 gatctgaagc gatcccgctc aagaagcttg ggcggtgacg gccagccgcg tgcggacgcg
      301 ggcgatctcg ccgagcgctc gatcgaccca cgctccggcc gactcgatcg acggcgcgag
      361 atcgaaggcg gcgttcagcg cctccgcggg aacatcggcg gtgaagtggg gatcgctcgc
      421 cagcacgtcc cgcagcggcg ccccgcccgt gcgcaccttg ccggccgcgt cctcgacgag
      481 ccggtgcgcg cggtgacgcc cgagcttcgg cgccagccgc gcggcgacgg catcggcgaa
      541 gagcaggccg cgggtcgcgt cgatgttctg gcgcatgcgc gaggcgtcga ccatgagccc
      601 ggtagccagc gtgcgcgcct cgcgcaggct gcccgagacg aggccgaaca gctgcggcag
      661 cgcctgccac tcggcatgcc aggggccggc gggccgctca tgcgaggcgg ccatcgcgtc
      721 gtggagcgtg ccgacatggc ctttgcccgc ggcatgcgcc gccaggatca cggtcgccga
      781 gacggggttg cgcttgtgcg gcatggcgga cgagccgccg cggcctggaa cgtagggctc
      841 ggccacctcg ccgacctcgg tcgaggcgag gtgcacgacg tcggtcgcca tcttggcgag
      901 cgcgcccatc aaggtggcga gccaggcgcc tgtgtcgacc atgcgcgcgc gcagcgtatg
      961 ccaggtgacg ggcgtggttc cgagccccag ctcctcggcg aacgcctcga ccaccgcagg
     1021 cccctgcgcg ccggcagccg tgaaggtgcc gaccggtccg ccgagcgaca cgacgagggc
     1081 gcgctcgcgc aaccacggca gctgatcggc gacctcggca atgccggcgg cccagacgcc
     1141 gaccttgtag ccgaacgtga ccggcgccgc gtgctgaccg taggtgcggc cgacgcacgg
     1201 cgtctggcga tgctcgcgcg ccagcccggc aagcccgtcc aggatggcgt cgagctcgcc
     1261 ggcgatcagc gcgaaggcgt cgcgcatctg caggaccagc gccgtgtcga cgacgtcctg
     1321 ggtcgtggcg cccttgtgga aataaggctc gacctccttg ggcagcttcg cctgcacggc
     1381 cttgacgaag gggatggtcg gcacgccggc caggaccgtc tgcgcgccga tgtcggcgat
     1441 gtcgagcttc tcggccctga gcgccttgat cgcggccggg agctcctcgg gcaccatccc
     1501 gaaccggctt tgggcccagg ccagggcggc ttcgacgcgc agcatcgccg cgagccgggc
     1561 gcggtcgccg aacacggcgc gcatctcgtc gctggcgaag agcgggccaa ggatctggga
     1621 atcgagggcg gaaaaggtca tgtcggagca acggtgttca cgcccactcc attggcagac
     1681 cgacatagtt ctcggcaagt gcggtcgcgg ccgcccgcga gctcgtgacg tagtcgagct
     1741 cggcgatctg gcgccggtgg tcgaacgggc tcgcgtcgtc gtgccggtgc agcatcgagg
     1801 tcatccacca cgagaagcgc tgcgccttcc agacccggcg caggcaggtc tccgagtagc
     1861 gcgcgagcag gtcggtgcgg cccgcccggt agaactcggt gagcgcccgc gccagcacgc
     1921 gcacgtcggc gacggcgagg ttcatgccct tggcgccggt cggcggcacg atatgggcgg
     1981 cgtcgccggc gaggaacagc cgcccgtatt gcatcggctc gacgacgaag ctgcgcatgc
     2041 cggtgatgcc cttctgcagc accgggccct ccgtcagcgc ccagtcgctg ccgccgtcga
     2101 gcctggtctt cagctcggcc cagatgcgcg cgtcgggcca cgcgccgatg tcctcgtcgg
     2161 gcgcgcactg gatgtagagg cggctgatct gcggcgtgcg catgctaaaa agggcgaagc
     2221 cgcgctcgtg atgcgcgtag atcagctcgt gcgagaccgg ctgcgcccgc gccaggatgc
     2281 cgagccaggc gaatggatag acgcgttcga acgtggtcag cacgccggcc gggatggacg
     2341 ggcggcagat gccgtgaaag ccgtcgcagc cggcgatcac gtcgcaggcg acctcccgcg
     2401 gctcgccgtc cttcacgaag cggatcttcg gcgtcggccc gtcgagatcg tggacgctga
     2461 cgtcgcgggc ctcgaacacg atctcgccgc cggcgccgag ccgcgccgcg atcaggtcct
     2521 tgaccacctc gtgctggcca tagaccgtca cgccctgccc gttcgccagc tcggcgaaat
     2581 cgatgcggtg gcccttgccc ttgaagcgca gctcgatgcc atggtggacg aggccttcgc
     2641 ggcgcatgcg ctcgccgacg cccgtctcga ccatgaggtc ggccgtgccc tgctcgagga
     2701 cgccggcgcg gatgcgctct tccacgtatt tgcggctgcg gtcctcgacg atgaccgacg
     2761 cgatgccctc gcggtgcagg aggtgggaca ggaagaggcc ggccgggccg gccccgacga
     2821 tcccgacttg agtgcgcatc acccgcgtcc gcccggcgcg cgccttcgcc tatgcctcga
     2881 agaacacggt ctcgttcttg ccctgcaggc ggatgtcgaa ggtgtaggtc ggctcgccgc
     2941 cctgcgtcgt ccgcttggcg atcagcgtgc cgcgcccatc ctcgggcacg agcgtcagga
     3001 tcgggtcggc ggcgttggcg gcctcgccct cgaaatagat gcgcgtgaag gcgtggcgca
     3061 gcatgccgcg cgcgaacacg ttgacgttga catgcggcgc ctgcgtgccg ccgttcgggc
     3121 ccgggacctg gcccggcttg atggtcgtga agcggtaacg gccctcggcg tcggttccgg
     3181 agcgcccgaa acccttgaag cgggcgttcg gcagggcgcg gcgatcggcc gaatgggcgt
     3241 agcgcccctg cccgtccgcc tgccagatct cgaccatggc gtcgggcacc ggctggccgt
     3301 cgccgtcgaa gacgcggccc tcgatgcgga tgcggtcgcc ggcggcgtcc tcggtgacga
     3361 gatcgctggt gaccacttcg gcatagccgt aggcccgggg cgtcaggcaa taagcgaaga
     3421 acggcccgac ggtttgcgac gggctgatgc cgagcgcctt cgcagccttc ttctcagtca
     3481 tcatgcggct cctcgaaggg ggtcgcgctg cgcccgcgca gcacgatgtc gaacttgtat
     3541 ccgagcgccc attccggctg cgttgtctca agatcgaact tggagatcag ccgctcccgc
     3601 gccgccgcat ccgcaatcga attgaagatg ggatcgtagg cgaagagcgg atcgcccggg
     3661 aaatacatct gcgtgatga
//
LOCUS       DATAIQ010000824         2599 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_250158, whole genome shotgun sequence.
ACCESSION   DATAIQ010000824 DATAIQ010000000
VERSION     DATAIQ010000824.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2599)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2599)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2599
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_250158"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            116..670
                     /locus_tag="VHN20_13575"
     CDS             116..670
                     /locus_tag="VHN20_13575"
                     /inference="COORDINATES: protein motif:HMM:NF013854.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047429 - nucleoside triphosphate
                     diphosphatase activity [Evidence IEA];
                     GO_process: GO:0009143 - nucleoside triphosphate catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="non-canonical purine NTP pyrophosphatase"
                     /protein_id="HEX2726843.1"
                     /translation="MRLRFLSSNPNKIAEAKAILTDAGHELAAVRTKLDEMQSDDVEL
                     LVRDKTIRAFRLIGRPVFVEHTGLFIDALNGFPGGLTQIFWDRLGADRIARLFSREDG
                     GRAVARTRIGYCDGRCVHQFEGEVRGRLAPEPRGDRSQWDCIFILEGSNQTFAEMGER
                     KNEVSMRRKALECFAAFLSEADDD"
     gene            663..1475
                     /locus_tag="VHN20_13580"
     CDS             663..1475
                     /locus_tag="VHN20_13580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIR2 family protein"
                     /protein_id="HEX2726844.1"
                     /translation="MIEDLVAAIRNRQAILFAGAGISMSVGLPSWRTLIEHMGKELGF
                     EPEIFANPDTSYFALAEYYRLQQGSIGPLRSWMDRNWQIPEEDLRKSRVHELIVALDF
                     PIIYTTNFDRNLETSFQLRGKKFVKVTNAKDVARVQDGVTQIVKFHGDFDDDQTLVLA
                     ETDYFNRLAFETPLDIKFQADALGKTILFAGYSLSDINIRLILYRLWRRWHESGYEKD
                     RPKSYVFMMRPNPVEEAVLQQWGITAISEETDDPERALEVFLAKLKERADAA"
     gene            1620..>2599
                     /locus_tag="VHN20_13585"
     CDS             1620..>2599
                     /locus_tag="VHN20_13585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family metallopeptidase"
                     /protein_id="HEX2726845.1"
                     /translation="MQANVAAASASDDPFAADWETPFGLPPFERIAPEHFAPAFASAM
                     DEQRQQVDVIAADPAEPSFDNTIAALELGGRRLRRVAAVFFNLTGAHTNDALQAIERE
                     MAPRLAKHRNDIFMNEALFRRVEAVHDRRDTLGLDAEQKRVLARYHTIFTRAGACLAP
                     HGKQRLAAITERLATLGTQFSQNVLADEKDYTLVLERDDDLAGLPDFARAAAAQAAAE
                     RGLAGKHVITLSRSSIEPFLQFSKRRDLREQAFRAWIGRGDQGGATDNKAIVAEMVAL
                     RAERAKLLGYETFAHFKLADMMAKTPAAVLGLLDEVWGPARIRAEQEADA"
BASE COUNT          458 a          878 c          858 g          405 t
ORIGIN      
        1 gttattgggc acggggctgt cgctcgaagg agggttgatc gattttgcgc tcttatcaat
       61 ggccgggccg gcaaagcgtt ccggcggccg cggacgcgcc cgggagaagc gcgccatgag
      121 gctgcggttc ctgtcgagca accccaacaa gatcgccgag gcgaaggcga tcctgaccga
      181 tgcgggccac gagctggccg cggtccggac gaagctcgac gagatgcaga gcgacgacgt
      241 cgagctgctg gtgcgtgaca agacgatcag ggcattccga ctcatcggcc ggccggtctt
      301 cgtcgaacat acgggcctgt tcatcgacgc cctcaacggc tttcccgggg ggctcaccca
      361 gatcttctgg gaccggctcg gggcggaccg catcgccagg ctgttctccc gggaagacgg
      421 cgggcgcgcc gtcgcccgca cccgcatcgg ctattgcgac gggcgctgcg tccaccagtt
      481 cgagggcgag gtgcgcggca ggctagcgcc cgagccgcgc ggcgaccgct cgcaatggga
      541 ctgcattttc atcctcgaag gctccaacca gacgttcgcc gaaatgggcg agcgcaagaa
      601 cgaggtctcg atgcgcagga aagccctcga gtgcttcgcc gccttcctga gcgaggcgga
      661 cgatgattga ggacctcgtc gcggcgatca ggaaccggca ggcgatcctg ttcgccggcg
      721 ccggcatctc gatgagcgtc gggctgccgt catggcgcac cctgatcgag catatgggca
      781 aggagctcgg cttcgagccg gagatcttcg ccaacccgga cacgagctat ttcgcgctcg
      841 ccgaatatta caggctgcag cagggcagca tcggcccgct gcgcagctgg atggaccgca
      901 actggcagat cccggaggag gacctcagga agtcgcgggt gcacgagctg atcgtcgcgc
      961 tcgatttccc gatcatctac accaccaatt tcgaccgcaa tctcgagacc tccttccagc
     1021 tgcgcggcaa gaaattcgtc aaggtcacga acgccaagga cgtggcgcgc gtgcaggacg
     1081 gcgtcacgca gatcgtcaag ttccacggcg atttcgatga cgaccagacg ctcgtgctgg
     1141 cggagacaga ctacttcaac cggctcgcct tcgagacgcc cctcgacatc aagttccagg
     1201 cggatgcgct cggcaagacc atcctgttcg ccggctacag cctgtccgac atcaacatta
     1261 ggctgatcct ctaccgtctg tggcgcaggt ggcacgagtc cggctacgag aaggaccgcc
     1321 ccaaatccta cgtgttcatg atgcgcccga acccggtcga ggaagcggtg ctgcagcaat
     1381 ggggcatcac tgcgatcagc gaggagacgg acgaccccga gcgcgcgttg gaggtgttcc
     1441 tcgccaagct caaggagcgc gccgacgcgg cgtagccgcg gacgtgcgtt gtcgacgcgg
     1501 gaagcttctc cggccgacgc cgtgactttc gtcatggcgc tcgctatgtg gtacgcactc
     1561 agaatgccac gcgatttgag atgagccgcc gcgacgcggt gcccttgaag gaccatccta
     1621 tgcaagcgaa tgtggcggcc gcgtcagcct ccgatgatcc cttcgccgcc gactgggaga
     1681 ccccgttcgg cctgccgccg ttcgagcgca ttgcgccgga gcattttgcg ccggccttcg
     1741 ccagcgccat ggatgagcag cggcagcagg tcgacgtcat cgccgccgat ccggccgagc
     1801 cgagcttcga caacaccatc gcggccctcg agctgggcgg gcgccgtctt cgccgcgtcg
     1861 cggccgtgtt cttcaatctc accggcgccc ataccaacga tgcgctccag gcgatcgagc
     1921 gggagatggc gccgcggctc gccaagcacc gcaacgacat cttcatgaac gaggccttgt
     1981 tccggcgggt cgaggccgtc cacgaccgcc gcgacacgct cggcctcgac gccgagcaga
     2041 agcgcgtgct cgcccgctac cacacgatct tcacgcgcgc cggtgcgtgc cttgcgccgc
     2101 acggcaagca gcggctcgcg gcgatcaccg agcggctggc gacgctcggc acgcagttca
     2161 gccagaacgt gctcgccgac gagaaggatt acacgctggt cctcgagcgc gatgacgacc
     2221 tcgccggcct gccggatttc gcgcgcgccg cagccgccca ggccgccgcc gagcgcggcc
     2281 tcgccggcaa gcacgtcatc acgctgtcgc gatcgagcat cgagccgttc ctgcaattct
     2341 ccaagcgccg cgacctgcgc gagcaggcgt tccgggcctg gatcgggcgc ggcgaccagg
     2401 gcggcgcaac cgacaacaag gccatcgtcg ccgagatggt ggcgctgcgc gccgagcggg
     2461 cgaagctgct cggctacgag actttcgcgc atttcaagct tgccgacatg atggcgaaaa
     2521 cgcccgccgc cgtgctcggg ctgctcgacg aagtgtgggg gccggcgcgc atccgcgccg
     2581 agcaggaagc cgacgcgtt
//
LOCUS       DATAIQ010000825         4290 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_158253, whole genome shotgun sequence.
ACCESSION   DATAIQ010000825 DATAIQ010000000
VERSION     DATAIQ010000825.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4290)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4290)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4290
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_158253"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(121..861)
                     /locus_tag="VHN20_13590"
     CDS             complement(121..861)
                     /locus_tag="VHN20_13590"
                     /inference="COORDINATES: protein motif:HMM:NF015549.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AzlC family ABC transporter permease"
                     /protein_id="HEX2726846.1"
                     /translation="MSAPVTANGGDLSNSDAAWRGVRDALSLPAWVVGCSLLGVGSLA
                     RDAGFPAGAAVLSTVFIWAAPAQAIFFASVAAGTSLPAIGLAICLSSIRFLPMTLAIL
                     PLMRRPGQSLVTLIAAAHLVAVTTWVEGLRRMPAMPPPRRLPYFFGFALACIGVSATT
                     TFIGYFLVGALPIPLAAGLLFLTPVFFSVSLVAGARGVGDWTAIVLGFLLAPAGNVVL
                     GKDFDLLAAGLIGGTAAYFAGQWRHKGP"
     gene            complement(858..1586)
                     /locus_tag="VHN20_13595"
     CDS             complement(858..1586)
                     /locus_tag="VHN20_13595"
                     /inference="COORDINATES: protein motif:HMM:NF015549.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AzlC family ABC transporter permease"
                     /protein_id="HEX2726847.1"
                     /translation="MREGHDHRLGRAAFWRGARDALSLPAWVLGFSVLGIGSLVRDAG
                     FPAGAAALSTVVMWAGPAQAIFFASVAAGVSYPVIALAVTLSSIRLLPMTVAILPLLR
                     RPGQGLLTQLAAAHFIAVTMWVEGLRRLPPLPPPERVPYFFGFALACLVVCTTTTYIG
                     YFLLGALPVPLAAGLLFLTPIFFTVSLVAGATSLADWAAMLLGAALAPAFHILLSKDV
                     DLLAAGLVGGTAAYAIGKAGAARR"
     gene            1742..2479
                     /locus_tag="VHN20_13600"
     CDS             1742..2479
                     /locus_tag="VHN20_13600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter permease"
                     /protein_id="HEX2726848.1"
                     /translation="MWNLANPARFMALSGQLMPWLAGAAALLLAAGLYMGWFLAPADY
                     QQGETVRIMFLHVPAAWLGLFFYLVMATSALGTLVWRHPLADVSQKAAAPIGAAFTLI
                     CLITGALWGKPMWGTYWVWDARLTSVLVLFLMYCGILALWRTIEEPNRAARAVSILTL
                     IGVVNLPVIKFSVDWWNTLHQPASVVRLGGPTIHPSMLYPLLVMAVGFTMLGIVLHLA
                     GMRTEILRRRVRTLTILEAERLDRQAA"
     gene            2483..2698
                     /gene="ccmD"
                     /locus_tag="VHN20_13605"
     CDS             2483..2698
                     /gene="ccmD"
                     /locus_tag="VHN20_13605"
                     /EC_number="7.6.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006202679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0015886 - heme transport [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmD"
                     /protein_id="HEX2726849.1"
                     /translation="MDLGPHAFFIVAAYAVTAMIVAGLILRAVIDHRAQQRALAALEG
                     RGVRRRSEAAAATAADGVPGKGARVGA"
     gene            2727..3317
                     /locus_tag="VHN20_13610"
     CDS             2727..3317
                     /locus_tag="VHN20_13610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019403733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbE family thiol:disulfide interchange protein"
                     /protein_id="HEX2726850.1"
                     /translation="MVGAPSLETAEPQPRVRLLYLLPVLVFTALALLFLVRLFSGDPS
                     RVPSALIGRPVPAFALEPLPGLAQAGQPVPGLADADLKGRVTVVNVWASWCGPCRQEH
                     PMLIALARNPSVRVVGINYKDNPENARRFLGALGNPFAAVGIDPSGRAAIDWGVYGVP
                     ETFVIGPDGTIRHKHIGPLAPAQMSAFLEQIRAAAR"
     gene            complement(3350..3955)
                     /locus_tag="VHN20_13615"
     CDS             complement(3350..3955)
                     /locus_tag="VHN20_13615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012254097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septation protein A"
                     /protein_id="HEX2726851.1"
                     /translation="MSDRKHLNPLLKLVLELGPLVVFFMANAYGDRFGIAEDRRIFAA
                     TAVFIVVTLVALTVHYALVRKLPIMPLVSGIVVVVFGGLTLWLDNETFIKLKPTIVNT
                     LFGVVLLVGLYFGKPLLAIVLDSVFELTDEGWRKLTFRWALFFFVLALLNEIVWRTQT
                     TDTWVSFKVFGIMPITVLFALLQTPLLMRHEVKREGAADSP"
     gene            complement(3952..>4290)
                     /locus_tag="VHN20_13620"
     CDS             complement(3952..>4290)
                     /locus_tag="VHN20_13620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HEX2726852.1"
                     /translation="QNKAGLMAELEKVVRVMKKLDADAPHAVLLVLDATVGQNAISQV
                     ELFRQVAGVTGLVMTKLDGTARGGILVALAARFGVPVHFIGVGEGVDDLEPFAARDFA
                     RAIAGLEQAA"
BASE COUNT          736 a         1475 c         1479 g          600 t
ORIGIN      
        1 cgttgaggcc gcgcgacagg aacaccgcaa gcacgcgcca gatttcgctc ggcaaaaagc
       61 cgaagacgat gatcaaaagg taaggccacc aggtgcccgc cccggtgatc gcatccgcgc
      121 tcatggccct ttgtgcctcc attgaccggc gaaataggcc gccgtgccgc cgatcagccc
      181 ggcggcgaga agatcgaaat ccttgccgag gacgacgttg ccggccggcg ccaggaggaa
      241 accgagcacg atcgcggtcc agtcgccgac gccgcgcgcg ccggcgacga gcgagacgct
      301 gaagaagacc ggcgtcagga aaagcaggcc tgccgcgagc ggaatcggca gcgccccgac
      361 cagaaaatag ccgatgaagg tggtggtggc gctgacgccg atgcaggcga gcgcgaaccc
      421 gaagaaatag ggcaggcggc gcggcggcgg catggccggc atgcgccgca gaccctccac
      481 ccacgtggtc acggcgacga gatgcgctgc cgcgatcagc gtgacgaggc tctgcccggg
      541 ccgccgcatc agcggcagga tggccagggt catcggcagg aagcggatcg acgacaggca
      601 aatggcgaga ccgatcgccg gcaggctcgt gccggccgcg acgctcgcga aaaagatcgc
      661 ctgcgcggga gccgcccaga tgaagaccgt cgacagcacc gccgcgccgg cgggaaagcc
      721 ggcgtcgcgc gccaggctgc cgacgccgag cagcgagcag ccgaccaccc aggccggcag
      781 cgacagcgca tcgcgcacgc cgcgccaggc tgcgtccgag ttcgagaggt cgccgccgtt
      841 ggcggtcacg ggtgcgctca tcgccgcgcc gccccggcct tgccgatcgc ataggcggcg
      901 gtgccgccga cgagcccggc ggcgagcaga tcgacgtcct tgctgagcag gatgtggaag
      961 gccggcgcca gcgcggcgcc gagcagcatc gcggcccagt cggcgagcga ggtggcgccg
     1021 gcgacgagcg acaccgtgaa gaagatcggc gtgaggaaca ggaggccggc cgcgaggggc
     1081 accggcagcg cgccgagcag gaagtagccg atatacgtcg tcgtcgtgca cacgacgagg
     1141 caggcgaggg cgaaaccgaa gaaatacgga acgcgctccg gcggcggcag cggcggcagg
     1201 cgccgcaatc cctcgaccca catcgtgacc gcaatgaaat gcgcggcggc aagctgcgtg
     1261 agaaggccct ggcccggacg gcgcagaagc ggaagaatgg ccacggtcat cggcagcagg
     1321 cggatcgacg acaaggtcac cgccagggcg atcaccggat agctgacgcc ggcggcgacg
     1381 ctggcgaaaa agatcgcctg ggcagggcct gcccacatga cgacggtcga cagcgcggcg
     1441 gcgccggcgg gaaacccggc gtcgcgcacc aggctgccga tgcccagaac cgaaaagccg
     1501 aggacccagg cgggcagcga aagggcgtcg cgcgcgccgc gccagaatgc ggcgcggcca
     1561 agccggtgat cgtgcccctc tctcatcgga gcgcttatag acgaaccgtt ccgccaaagc
     1621 ccagatcggt gccgccggcg ctcccagctt tgcgccccga cgggcgcgtg ccaggcgcat
     1681 ggcccgtgga cgggcattcg ccgcattgcc gacccgggcc gccgccgcta catcgtgaag
     1741 catgtggaat ctggccaacc cggcccgctt catggccctg agcgggcaac tgatgccgtg
     1801 gctcgccggc gcggccgcgc tgctgctggc ggctgggctc tatatgggct ggttcctggc
     1861 gcccgccgat taccagcagg gcgagaccgt gcgcatcatg ttcctgcatg tgccggcggc
     1921 atggctcggc ctgttcttct acctcgtcat ggcgacgtcg gcgctcggca cgctggtgtg
     1981 gcgccatccc ctcgccgacg tctcgcaaaa ggcggctgcg ccgatcggcg ccgcgttcac
     2041 gctgatctgc ctgatcacgg gcgccctgtg gggcaagccg atgtggggca cctactgggt
     2101 ctgggacgcg cggctgacct cggtgctcgt actcttcctg atgtattgcg gcatcctggc
     2161 cttgtggcgc acgatcgagg agccgaaccg cgcggcgcgc gccgtgtcga tcctcacgct
     2221 gatcggcgtc gtcaacctgc cggtcatcaa gttctccgtc gactggtgga acacgctgca
     2281 ccagccggct tccgtggtgc ggctcggcgg acccacgatc cacccgtcga tgctctatcc
     2341 cctgctcgtg atggcggtcg gcttcacaat gctcgggatc gtgctgcatc ttgccggcat
     2401 gcgcacggag atcctgcgtc gccgcgtgcg cactctcacc atcctcgagg cagagcgcct
     2461 cgaccggcag gccgcctgag ccatggatct cgggccgcac gccttcttca tcgtcgctgc
     2521 ctacgcggtc acggccatga tcgtcgcggg gctgatcctg cgcgcggtca tcgatcaccg
     2581 tgcccagcag cgcgccctgg cggccctgga aggccgcggc gtgcggcgcc ggtccgaagc
     2641 ggcggccgcc acagcggccg acggcgttcc aggcaaggga gcgcgcgtcg gtgcctgaga
     2701 tcacgtcgcc caacacggat cgtgcaatcg tcggcgctcc ttccctggag acggccgagc
     2761 ctcagccgcg tgtccgtctc ctctatctgc tgccggttct ggtgttcacg gcgctggcgt
     2821 tgctcttcct ggtgcggctg ttctccggcg atccttcgag agtgccgtcg gcgctgatcg
     2881 ggcggcccgt gcccgccttc gcgctcgagc cgctgccggg cctcgcgcag gccggccagc
     2941 cggtgccggg cctcgccgac gccgatctca aagggcgggt caccgtggtc aatgtctggg
     3001 cgtcgtggtg cggcccgtgc cgccaggagc acccgatgct gatcgcgctg gcccgcaacc
     3061 cctcagtccg cgtggtcggc atcaactaca aggacaatcc cgagaacgcg cggcgcttcc
     3121 tcggcgccct cggcaatccg tttgcggccg tcggcatcga cccgagcggg cgggcggcca
     3181 tcgactgggg cgtctacggg gtgcccgaga cattcgtgat cgggccggac ggcaccatcc
     3241 gccacaagca tatcggaccg ctcgcgccgg cgcagatgtc cgcgttcctg gaacagatcc
     3301 gcgccgcagc ccggtagggc actgccgact gcctactgcc gattgccgct taaggcgaat
     3361 cggcggcgcc ttcgcgcttc acttcgtggc gcatgagcag cggcgtctgc agcagcgcga
     3421 acaggaccgt gatcggcatg atgccgaaca ccttgaagct cacccacgta tcggtcgtct
     3481 gcgtgcgcca gacgatctca ttgaggagcg cgagcacgaa gaagaacaag gcccagcgaa
     3541 aggtcagctt gcgccagccc tcgtcggtga gctcgaacac gctgtcgagc acaatcgcga
     3601 gcagcggctt gccgaaatac agcccgacga gcagcacgac gccgaacagc gtgttgacga
     3661 tggtcggctt cagcttgatg aaggtttcgt tgtcgagcca cagggtgagg ccgccgaaca
     3721 cgaccacgac gatgccggag acgagcggca tgatcggcag cttgcggacc agcgcgtaat
     3781 gcacagtcag ggccaccagc gtcacgacga tgaacacggc cgtcgccgcg aagatgcggc
     3841 gatcctcggc gatgccgaac cggtcgccat aggcgttggc catgaagaac acgaccagcg
     3901 ggccgagctc gagcaccagc ttgagaagag gattcaggtg tttgcggtcg ctcatgcggc
     3961 ctgctccagt ccggcgatgg cgcgcgcgaa atcgcgcgcc gcgaatggct ccagatcgtc
     4021 tacgccttcg ccgacgccga tgaagtgcac cggcacaccg aacctcgcgg ccagggcgac
     4081 gagaatgcca ccccgcgccg tgccgtcgag cttggtcatg acgaggcccg tgaccccggc
     4141 cacctgccgg aacagctcga cctgcgagat ggcattctgg ccgaccgtgg cgtcgaggac
     4201 cagaagcacg gcatgcgggg cgtccgcatc gagcttcttc atcacgcgca ccaccttttc
     4261 gagctccgcc atcagtccgg ccttgttctg
//
LOCUS       DATAIQ010000826         1616 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_135575, whole genome shotgun sequence.
ACCESSION   DATAIQ010000826 DATAIQ010000000
VERSION     DATAIQ010000826.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1616)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1616)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1616
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_135575"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            431..898
                     /locus_tag="VHN20_13625"
     CDS             431..898
                     /locus_tag="VHN20_13625"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX2726853.1"
                     /translation="MPVDRTIPVLIVEPHETIVVLVERMLRELGFEKVQRASDSTSAW
                     EMLREAAQTLVIADLHLQPSNGLQLLRMIRADQKLRRCPFLIMAETLTADEALAVKQA
                     GVDGLMLKPFKPDALEPKLEAALRNTGRSRVAEAGPLRKAHVALGRRHQYLPG"
     gene            1052..1261
                     /locus_tag="VHN20_13630"
                     /pseudo
     CDS             1052..1261
                     /locus_tag="VHN20_13630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012334643.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          285 a          520 c          537 g          274 t
ORIGIN      
        1 ggcagcttga ccgacgccgg aacctcgatc ttggcgccgc ccgacgagag gtcgcggatg
       61 acgcatctcg cctcgaggtt gcggccgagg atcagcgccg tgcccatgac cttgcgccgc
      121 gccgcacggc ggttttccca cctcaggtca ttggggttca ggttcgggtt ggccgtcatc
      181 gcattcgcgc cgccgtcgcg tggtacgccg ctcccggcat gctagggccg caaccgttaa
      241 gcgttcctta acttgattgt tggccggccg gctcgctggc cgatgtcggc tcgcaggatg
      301 cgtgtcgtgc cgtcccttga tgggatcacg ccgggaaaca taaaattcga ctaaaacgtt
      361 tggcggggcg tcaaagcccg gcgtgctacg gtctgctctt cggaagcatt cctttgcggt
      421 gcgggacatc atgccggtcg acagaaccat tccggttctc atcgtcgagc cacacgagac
      481 catcgtcgtg ctcgtcgagc gcatgttgcg cgagctgggc tttgaaaaag ttcagcgcgc
      541 atccgacagc acgtccgcgt gggagatgct gcgggaagcg gctcagacgc tggtcatcgc
      601 cgatcttcac ctgcagccct cgaacgggct gcagctgctg cgcatgatcc gggccgacca
      661 gaagctcaga cgctgcccgt tcctgatcat ggccgagacc ctgaccgcgg acgaggccct
      721 cgccgtcaag caggccggcg tggacggcct gatgctgaag ccgttcaagc ccgacgcgct
      781 cgagccgaag ctcgaggcgg cgctcaggaa caccggcagg tcgcgcgtgg cggaggccgg
      841 tcctctgcgg aaagcgcatg tcgcgctcgg ccgccgccat cagtaccttc ccggatagcg
      901 cggacctgat cgcaccgcga ttgtcgcgtg cgcgtcgttc tccatctgcc caagagcgaa
      961 tgcgaggcgt gaacctgacg acgccggcgg cgttgacaag gtccaaccct cctttccgat
     1021 actccgtcga gggcatgatc aggagaaacg aatggccaat gcgagcaagc ggcacgccgg
     1081 gcccggcacc cagggcaaga gcgccggcac gggggcaatg accgaactgc cggaaggcgt
     1141 gctggaagag aacatggtcc tcagcaatcg cgacaaatcc cggcacagcg acggccgcgg
     1201 gctcgacagc aagatggtgc agacggacca gtatcaggat catgcgggca accgccggaa
     1261 cgtcgacccc gcgcccggcg attcgagatc gcgatagcgc atcggcgacg acgctcagag
     1321 acagttcgct tcgacgaaag cagtggctag gcgccttcgc gtggcgccgg cccgtcgccg
     1381 cgcgcgtcct gtgtgatgcg gatcacgtcg gccgtgcggt tcaggaggta taccgcatcc
     1441 gacctcgtga aggggggagc cgaatgcgac ccttgatgcc gatcgtcggt cattgcctgc
     1501 tgatcgccgt ggcgatcggc gcgctgatcc aggcgctgtt ttagggcgac acgtggcgcc
     1561 gccagtcaac gacctcatgg tgcgcttgcc agacgctggt ctgacgcgcg aagtta
//
LOCUS       DATAIQ010000827         1700 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_158269, whole genome shotgun sequence.
ACCESSION   DATAIQ010000827 DATAIQ010000000
VERSION     DATAIQ010000827.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1700)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1700)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1700
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_158269"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            259..1530
                     /locus_tag="VHN20_13635"
     CDS             259..1530
                     /locus_tag="VHN20_13635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012333915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HEX2726854.1"
                     /translation="MGRSIGLDVHRDFCEVAIADGGRARSAGRIAAMPERLELFAQSL
                     APDDRVVMEATGNALAIARILQAHVGEVVLAHAKQVRAISHARIKTDKVDARVLADLL
                     AADLIPAVWIGDERCRMLRRLVSRRRGLVKRRTQIKNEIAAALHRNLKGRNPASDPFG
                     KKGREWIAAQQLPIDERLTVDGCLRQLDFLGAELAQIDEIIAQQALGDEDARRLMTIP
                     GIDVVCAATLVAVIGDIRRFPSSRHLVGYLGLHPTIRQSGNGPARHGRVSKEGSAAAR
                     HVLVESAWSAAKSPGPLRAFAQRTAARRGRHVATVAVARKLAVLAWHLLTRGEDYAFA
                     RPSLVRRKIRRLELTAGAPRAKPGPKPDPVWNTTAEAAEKRLALQAETAYRRLIADWQ
                     ASGPKVGAGATPERASQRPSKGKAARQAHCS"
BASE COUNT          251 a          599 c          595 g          255 t
ORIGIN      
        1 ccgaagcaga gttgtgtcct cggggcatga aactgctcat cggaggccgc gtccgggccg
       61 gcggctacgg tcggcggacc tggcacaggg gccttctggg agaacagatg ttgggcaggc
      121 cgttattcgt cgatgggctg cgagcccgag cttttcattg gccgcccctg cgacttgccc
      181 gggtgcgctg cgagcgcgaa tccgtaggtg tcgttcttgc ccgccgtctt ctcgttgtcg
      241 tcgagctggg aggtccggat gggcagatcg atcggtttgg acgtgcatcg cgacttctgt
      301 gaggtcgcga tcgccgatgg cggccgggcg cgctcggcgg ggcggatcgc cgcgatgccc
      361 gagcggctag agctgttcgc gcagagcctt gcccccgacg atcgggtcgt gatggaggcc
      421 acgggcaacg cgttggcgat cgccaggatc ctgcaggctc atgtcggcga ggtggtgctc
      481 gcgcatgcca agcaggtgcg cgcgatcagc cacgcgcgga tcaagaccga caaggtcgac
      541 gccagggtgc tcgccgacct gctggctgcg gacctgatcc cggcggtgtg gatcggcgac
      601 gagcgctgcc ggatgctgcg ccggttggtg tcgcgtcgcc gcgggctggt caagcgccgc
      661 acgcagatca agaacgagat cgccgcggcg ctgcatcgca acctcaaggg ccgcaatccg
      721 gccagcgacc cgttcggcaa gaaaggccgc gagtggatcg ccgcccagca gctgccgatc
      781 gacgagcgct tgaccgtcga cggctgcctg cgccagctgg acttcctcgg cgccgagctc
      841 gcgcagatcg acgagatcat cgcccagcag gcgctcggag acgaggacgc gcgccggctg
      901 atgacgatcc ccggcatcga cgtcgtgtgc gccgccacgc tggtcgccgt gatcggcgac
      961 atccgccgct tcccgagttc tcgccaccta gtcggctacc tcggactgca cccgacgatc
     1021 cgccagtcgg gcaacggccc tgcccgccac ggccgcgtct ccaaggaggg ctcggcggcg
     1081 gcccggcacg tgctcgtcga gtccgcgtgg tcggctgcga agagcccggg gccgctgcgc
     1141 gcgttcgccc aacgcaccgc cgccaggcgc ggacggcacg tcgccacggt cgcggtcgcg
     1201 cgcaagctcg ccgtgctcgc ctggcatctg ctcacccgcg gcgaggacta cgccttcgcg
     1261 cggcccagcc tcgtccggcg caagatccgc cggctcgagt tgactgccgg cgcgccccgg
     1321 gccaagcccg gcccgaagcc cgatcccgtc tggaacacga ccgccgaggc cgccgaaaaa
     1381 cgcctggcgc tgcaggccga aacggcctac cgacgcctga tcgccgactg gcaggccagc
     1441 ggaccgaagg tgggtgcggg cgcgacaccg gagcgcgcat ctcaaaggcc ctcgaagggt
     1501 aaggccgcgc ggcaggccca ctgctcctga cgcctgcact tcgccacgtc agtcacccgc
     1561 acccgcgacc agcgttgcag aggaggcccc aaccgtccag acgaattgac tttcatccgt
     1621 aagagcgcgg cgcctcgctc gtcggtgatg acgttggcgg ctcaggccgc ttggagttgg
     1681 gccacctcct ccttgttctc
//
LOCUS       DATAIQ010000828         2613 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_204077, whole genome shotgun sequence.
ACCESSION   DATAIQ010000828 DATAIQ010000000
VERSION     DATAIQ010000828.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2613)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2613)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2613
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_204077"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(99..1214)
                     /locus_tag="VHN20_13640"
     CDS             complement(99..1214)
                     /locus_tag="VHN20_13640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015933709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX2726855.1"
                     /translation="MGIALSLSIPLLSLEMERMGVSGTLIGLNTAVAGIASICAIPFV
                     PRLAARVGVLPLLWVCVVVAAVTLLAFKAMYSFAWWFPLRFVFSAALGPLFVLSEYWI
                     NAAAPPQRRGLVMGIYATILSLGFAAGPGVLTAVGTSGWAPYVAGTALFSLAALPLLM
                     GRGLSPELGDRPSRGVASFVVAAPSATIAALIFGTAETGGFALLPVYGLQLGFDAAAA
                     AFLVSVLALGNVIFQVPIGILSDRVDRRRLLLAIAAFGCIAGALIPAVAHHRPALYGL
                     LFVWGGITGAVYTVGLAHLGARFSGADLASANAAFVLLYSIGLVVGPPAVGAAMDAVP
                     PHGFAFSLAALFGIYVVIVLWRIRSARRLDASRPIGH"
     gene            complement(1324..2049)
                     /locus_tag="VHN20_13645"
     CDS             complement(1324..2049)
                     /locus_tag="VHN20_13645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HEX2726856.1"
                     /translation="MTERLTAAERERRWPNRRPRDAATLIIIDRSGREPKILMGRRHP
                     GHAFMPGKFVFPGGRIEAGDRRMVAAGTLHPRAEIALNARVPKPSPQRGRALALAAIR
                     ETFEETGLLLGTDAYGPPDGVPEGAWSAFREHGVFPDLEAMHLVARAITPPNRPRRFD
                     TRFFAIDRAAVAADVGGVTGPDAELIELAWVTLANANKLDLPTITQVILEELGDRLKA
                     GFAHELPVPFYYERRGRFVRELL"
     gene            complement(2087..2479)
                     /locus_tag="VHN20_13650"
     CDS             complement(2087..2479)
                     /locus_tag="VHN20_13650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012336300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF983 domain-containing protein"
                     /protein_id="HEX2726857.1"
                     /translation="MSDRPNWRSAIARGLRARCPACGQGRLFHRFLKVADTCEACGTE
                     LHHHRADDLPPYLVIFLVGHLVVWAILMTETRLEVPLWVQLALWPPLGLILCLALLQP
                     VKGAVVGLQYALGMHGFGVAEAQSRRGE"
BASE COUNT          460 a          872 c          935 g          346 t
ORIGIN      
        1 tgatggtgac ggctttggcc attgcgaaac ctcttgcagg cgtccgggcc agccgaacgc
       61 aaacgggccg gggagggccc cggccgaatt ccagccgctc aatgcccgat tgggcggctt
      121 gcgtcaaggc gccgggctga acggatgcgc cacagcacga tgacgacgta gatcccgaac
      181 agcgccgcaa gcgagaacgc gaagccgtgc ggtggcactg catccatcgc cgcgcccacg
      241 gcgggtggtc ccacgacgag cccgatgctg tagaggagca cgaatgcggc gttggcgctg
      301 gccagatcgg cgccgctgaa gcgggcgccg agatgggcga gacccacggt gtaaaccgcg
      361 ccggtgatgc cgccccacac gaacagcagc ccgtacaggg cgggtctgtg gtgcgcgact
      421 gcggggatga gcgccccagc gatgcagccg aaggcggcga tggcgagcag caggcggcga
      481 cggtccaccc ggtccgacag gatgccgatg ggcacctgga agatcacgtt gccgagcgcg
      541 aggacgctga ccaggaacgc ggccgcggcg gcgtcgaagc cgagctgcag gccgtagacc
      601 ggcagcaagg cgaagccgcc ggtctccgcc gtgccgaaga tcagggcggc gatcgtcgcc
      661 gacggcgcgg cgacgacgaa cgaggcgaca ccgcggctgg ggcgatcacc cagctccggc
      721 gacaggccgc ggcccattag gagcggaagc gcggcgagcg agaacaacgc ggttccggcc
      781 acgtagggcg cccagccgct cgttccgacc gccgtcaaga cccccggtcc ggcggcgaag
      841 ccaagcgaca ggatggtggc gtagatgccc atcacaaggc cgcgtcgctg cggcggggcg
      901 gccgcgttga tccagtattc cgagaggacg aacaaaggcc cgagcgccgc cgagaacacg
      961 aagcgcagcg ggaaccacca ggcgaagctg tacatcgcct tgaaggcgag cagcgtgacc
     1021 gccgcgacga cgacgcagac ccacagcagc ggcagcacgc cgacgcgtgc ggcaaggcgc
     1081 ggcacgaagg ggatcgcgca gatgctggcg atgcccgcca ccgccgtgtt gaggccgatt
     1141 aaggtgcccg agacgcccat gcgttccatc tcgagcgaca gcaggggaat ggagaggctc
     1201 agtgcaatgc ccacggcgct gacacagccg atcgccgcgg caattgccgc gattcgcgat
     1261 cgatcaaagc tctcgcgctc ggccgcttgt atgtgagagg agctcatgcg ccgagctgtg
     1321 ccgtcacagc agctcgcgca cgaaacgccc gcgacgctcg tagtagaacg ggacgggaag
     1381 ctcgtgggcg aacccggcct tcagccgatc ccccagttcc tccaggatca cttgagtgat
     1441 cgtcggcagg tcgagcttgt tcgcgttagc gagggttacc caggcgagct cgatcagctc
     1501 ggcatccggg ccggtgacgc cgccgacgtc ggcggcgact gccgcgcggt cgatcgcgaa
     1561 aaagcgcgtg tcgaagcggc gcggccggtt cggcggcgtg atggccctgg cgaccaggtg
     1621 catggcttcg aggtcgggaa aaaccccgtg ctcgcggaac gcgctccagg cgccttcggg
     1681 cacgccgtcc ggtgggccat acgcgtcggt tccgagcagc aggccggtct cctcgaatgt
     1741 ttcgcggatc gcggcgaggg caagggcacg gccgcgttgc ggggagggtt ttgggacccg
     1801 ggcgttgagc gcgatctcgg cgcgcggatg aagcgttccg gccgccacca tgcggcggtc
     1861 gcccgcctcg atgcggccgc cgggaaacac gaactttccc ggcatgaagg catgtcccgg
     1921 atgtcgccgg cccatgagga tcttcggctc gcgcccggac cggtcgatga tgatcaaggt
     1981 cgcggcatcc ctcggccgcc gattgggcca gcgccgctct cgctcggccg cagtgagacg
     2041 ctccgtcagg ctttgcgccc gggcttcggt cacgccaaaa ctccgattat tcgccgcgtc
     2101 tagactgcgc ctcggccacg ccgaagccgt gcatccctag cgcgtattgc aggccgacga
     2161 cagcgccctt cactggctgc agcagcgcga ggcacaggat caggccgagg ggcggccaga
     2221 gcgcgagttg cacccagagc ggaacctcga gccgcgtctc ggtcatgagg atggcccaga
     2281 cgacaagatg gcccacgagg aagatcacca gataaggcgg caggtcgtcg gcccggtggt
     2341 ggtgcagctc ggtaccgcac gcctcgcacg tgtccgcgac cttaaggaag cgatggaaca
     2401 ggcggccttg gccacaggcg ggacagcggg cgcgcaagcc gcgcgcgatc gcagagcgcc
     2461 agttcgggcg atcgctcact cgtcgagcgg cgtccacgcc gatcccctgt ctctgtcgcg
     2521 ccgctcgccg cgaaccttta cgcgcggcgt cgtcctgcgc ttgggcctca caccgttgct
     2581 gcctttgcga tgctgctcgc gcgccttgcc gag
//
LOCUS       DATAIQ010000829         2566 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_204164, whole genome shotgun sequence.
ACCESSION   DATAIQ010000829 DATAIQ010000000
VERSION     DATAIQ010000829.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2566)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2566)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2566
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_204164"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(482..1201)
                     /locus_tag="VHN20_13655"
     CDS             complement(482..1201)
                     /locus_tag="VHN20_13655"
                     /inference="COORDINATES: protein motif:HMM:NF025736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HEX2726858.1"
                     /translation="MVLALYGLYELTRGLVVGDAGVASAHANRLVAVERSLHLLFEAN
                     VQRAVHALPGLTGLLGVAYLTLHLAVTAGVLLWLHQRRPAAFPYVRTTLVLASGLALV
                     GFLVYPTAPPRLAGIGIADTVSNGHVDLNKGLVSSLYNPYAAVPSMHIGYAVIVGAIL
                     LRHGRRPLVRALGALYPPFVLLVVVATGNHFFFDAAAGALVAVVAAAAAAPLTRPAVP
                     IRISELPTRPEPQPAYEELAA"
     gene            complement(1291..>2566)
                     /locus_tag="VHN20_13660"
     CDS             complement(1291..>2566)
                     /locus_tag="VHN20_13660"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX2726859.1"
                     /translation="FGGFLLLGGRMADLLGRRLMLVTGLVVFAGSSLMGGLADSESLL
                     IAARFAQGIGAAMLSPAALSTLTSTFRTTRDRNTALGVWAAVSGIGGAAGVLFGGLLT
                     EGPGWRWVLFINVPFSAVAFVGAFLLLKRERIHAARLASFDALGAFLVTGGVLLLVYS
                     LVKAPDVGWATGRTFGGLAGAAVILAAFVVNELRVANPLIPLSILRVKGIAAADATQL
                     VAVAGFLPMFFFLTLYMQTVLGYSPIQTGVAYLPLTGGFIIAASISSQLFAHIGTKPI
                     VVLGAVITAGGLYWLSRIPLDGSYVSDILPGLLVVSIGMGGVYTGLTTAANAGVDADK
                     AGLAAGLLNTGVQLGAALGLAILSAVATARTTSVLDAGHGLAQASTDGFQLALLTGAF
                     IVLAATVIALLTPNRRETRSAVEEEPALDLAA"
BASE COUNT          476 a          816 c          921 g          353 t
ORIGIN      
        1 agtcatgatg cctcctccat cttctatccc tcgattgggg aaatcgattc gatgccaacg
       61 caccgaccgc ggcatcggga aggcacccta acgggcgtgc cggcatcggg ggccgtgcct
      121 gcatcgcaca atcagcagac cctgccggac gctgcatata ggtagcccgc gtccacgagt
      181 atccgccgaa tgcttcgcaa cggtccgtca ccgcccgatc gggccgcggc caattcgctt
      241 catttacggg gccttcccct tgagtcggtt agtagaaagg tgatgccccc ggcaagaatc
      301 gaacttgcgc acgtggttta ggaagcttct cgcgcgctcg gagaagtccc tgcattcgag
      361 gcgattccca acaatctggg cgaagcgagt gatcgcgcca gttctcctac tgtcccgacg
      421 ttggcggcga gaggtctgag caacctaagc gccgccacga ccgggttgtt cgcaccggtg
      481 gtcatgccgc gagctcctcg tacgcgggct ggggctccgg tcgggttgga agctcactga
      541 tccggatcgg aacggcgggt cgtgtcagtg gggcggccgc cgcggcggct accacggcga
      601 ccagtgcgcc ggcggcggcg tcgaagaaga agtggttgcc ggtggcgacg accacgagca
      661 gcacgaacgg cggatagagc gctccaagcg cgcgcacgag cgggcggcgc ccgtggcgga
      721 gcaggatggc gccgacgatc accgcgtagc cgatgtgcat gctggggacg gcggcgtagg
      781 ggttgtagag cgagctgacg aggcctttgt tgaggtcaac gtggccgttc gagacggtgt
      841 cggcgatacc gatgccggcc agccgcggcg gcgccgtcgg gtagacgagg aagccgacga
      901 gggccagccc gctcgcgagc acgagcgtgg tgcgaacgta cgggaacgcc gcggggcgac
      961 gctggtgcag ccagagcagc acgcctgcgg tcactgcgag gtgcagcgtc aggtacgcga
     1021 cgccgagcag gccggtgaga cccgggagag cgtgcacagc gcgctgcacg tttgcttcga
     1081 aaagcaggtg cagtgaccgc tcgaccgcga cgagccggtt ggcgtgagca gacgcgacgc
     1141 ctgcgtcccc gacgacgagc ccgcgcgtca gctcgtagag gccgtacagc gctagaacca
     1201 cgacggcttc ggttcggagc gaatgccgta cggacagcca gcgggggacc cggccggccg
     1261 tccgtacggc cttcaaagcc gccatgatgg tcacgctgcg aggtcgagcg ccggctcttc
     1321 ctccacggcc gaccttgtct cgcgcctgtt cggggtcagc agtgcgatga ccgtcgccgc
     1381 gagcacgatg aacgcgccgg tgaggagcgc gagctggaac ccatcggtag acgcctgggc
     1441 cagaccatga ccggcgtcca gcaccgacgt cgtgcgagcc gtggcgaccg ccgagaggat
     1501 cgcgaggccc agcgcggcac cgagctgcac gccggtgttg aggagcccgg ccgcaagacc
     1561 cgccttgtcg gcgtcgacgc ctgcgttggc tgccgtggtc agacccgtat agaccccgcc
     1621 cataccgatc gagacgacca gcaggccggg caggatgtcg gacacgtagg agccgtcgag
     1681 tggaatccgt gacagccagt agaggccgcc ggccgttatc acggcgccga gaaccacgat
     1741 cggcttggtg ccgatatgtg cgaacagctg ggagctgatg ctggccgcga tgatgaatcc
     1801 acctgtcaac ggcagatagg cgacgccggt ttggatcggc gagtagccga gcacggtctg
     1861 catgtaaagg gtgaggaaga agaacatcgg caggaagccg gccacggcaa ctagctgcgt
     1921 tgcgtcggcc gcagcgattc ctttgacgcg caagatcgac agcgggataa gcggattggc
     1981 cacacgcagc tcgttgacga cgaatgccgc caggatcacc gcagcgccgg cgagcccccc
     2041 gaacgtgcgc cccgtggccc agccgacgtc cggcgccttc acgagcgagt agacgaggag
     2101 gagcacaccg ccggtcacga gaaacgcccc gagggcgtcg aagctcgcca gccgtgcggc
     2161 gtggatccgc tcgcgcttga gcaggaggaa ggcgcctacg aaggcgactg cgctgaacgg
     2221 gacgttgatg aacaggaccc agcgccagcc tgggccttct gtgaggagcc cgccgaacaa
     2281 cacgccggcg gcgccgccga tcccggagac ggcggcccaa actccgaggg cggtgttgcg
     2341 gtcccgggtc gtgcggaacg tgctggtgag ggtcgacaac gcggcgggcg agagcatcgc
     2401 ggctccgatg ccttgggcga agcgggctgc gatgaggagc gattcgctgt cggccaggcc
     2461 acccatcaag gacgagccgg cgaacacaac caggccggtg acgagcatca ggcgccggcc
     2521 gagcaggtcc gccatgcggc caccgagcag caggaagccg ccgaag
//
LOCUS       DATAIQ010000830         1726 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_412727, whole genome shotgun sequence.
ACCESSION   DATAIQ010000830 DATAIQ010000000
VERSION     DATAIQ010000830.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1726)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1726)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1726
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_412727"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..576
                     /locus_tag="VHN20_13665"
     CDS             <1..576
                     /locus_tag="VHN20_13665"
                     /inference="COORDINATES: protein motif:HMM:NF012790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HEX2726860.1"
                     /translation="LSNNDFNAAARVYWTLKVAGHERVSVLDGGFSGWTSDPSRPLEA
                     GAAQPKAASPYPVKLNAALRAELADVERALGGRSATLVDARSQKAFEGGEKSPQARVP
                     GRLPGAVLVDQGKAYDAGSNRLKPADELERLFAGVPNEAISYCNTGHSAAGSWFVLSE
                     LLRRPGVRMYDGSMSEWTQDPARPVETGPAK"
     gene            complement(587..>1726)
                     /locus_tag="VHN20_13670"
     CDS             complement(587..>1726)
                     /locus_tag="VHN20_13670"
                     /EC_number="4.2.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-succinylhomoserine sulfhydrylase"
                     /protein_id="HEX2726861.1"
                     /translation="EGSLRSQFGETSEALFLTQGHVYPSAEECEARFAGQSKGFIYAR
                     FSNPTVTMFEKRMAAFEGAEAARATATGMAAVTASLMGQLRAGDHVVAARALFGSCRY
                     VIAELLPRFGVPSTLVDGTDLDAWRAAVRPETKVFFLESPANPTLEVIDIAAVARIAK
                     EAGATLVVDNVFASPIWQKPFELGADCVVYSATKHIDGQGRCLGGVILGSEDFIQTHI
                     HTFLRQTGPAMSPFNAWVMLKSLETLPLRVERQTATAEKVADKLAGHPKIRKLIYPGR
                     PDHPQADLVARQMKRGSNLIAMDIAGDKPGAFRFQNALQLVKISNNLGDAKSLITHPA
                     TTTHQRFTPQERGEMGVTEGLVRLSVGLEHPDDLLADLLQALERA"
BASE COUNT          263 a          578 c          614 g          271 t
ORIGIN      
        1 ctcagcaaca acgacttcaa cgccgccgcg cgggtctact ggacgctgaa agtcgccggc
       61 cacgagcgcg tctcggtcct cgacggcggc ttctccggct ggacgagcga cccgtcgcgg
      121 ccactcgaag cgggtgccgc gcagccgaaa gccgcgtcgc cgtatcccgt gaagctcaat
      181 gcggcgctca gggcagagct cgccgacgtc gagcgcgcgc tcggcggccg ctctgcgacg
      241 ctggtcgacg cgcgctcgca aaaagccttc gagggcggcg agaagagccc gcaggcgcgc
      301 gtgccgggcc gcctgcccgg cgccgtcctg gtcgaccagg gcaaggctta cgacgcgggc
      361 agcaaccgcc tgaagcccgc cgatgagctc gagaggctgt tcgccggcgt gcccaacgag
      421 gcgatcagct actgcaacac cggccacagc gccgccggca gctggttcgt gctctcggaa
      481 ttgctgcgcc ggccgggcgt gcgcatgtac gacggctcga tgagcgagtg gacgcaggat
      541 ccggcgcgcc cggtcgagac ggggcccgcc aaatgatctg agtgcgtcag gcgcgttcga
      601 gcgcctgcag caggtccgcg agcaggtcgt ccgggtgctc gagcccgacc gagaggcgca
      661 cgaggccctc ggtcacgccc atctcaccgc gttcctgcgg cgtgaagcgc tgatgcgtcg
      721 tggtcgccgg atgggtgatc aggctcttgg cgtcgccgag attgttggag atcttgacca
      781 gttgcagggc gttctggaag cggaacgccc ccggcttgtc gccggcgatg tccatggcga
      841 tcaggttcga gccgcgtttc atctgcctgg cgacgaggtc ggcctgcggg tgatccggac
      901 gtcccggata gatgagcttc ctgatcttcg gatggccggc gagcttgtcg gcgacctttt
      961 ccgcggtggc ggtctggcgt tcgacccgca gcggcagggt ctcgaggctc ttcagcatca
     1021 cccacgcatt gaacggcgac atggccggcc cggtctgccg caggaaggtg tggatgtgcg
     1081 tctggatgaa atcctcggag cctaggatga cgccgcccag gcagcggccc tggccgtcga
     1141 tgtgcttggt cgcggaatag accacgcagt cggcgccgag ttcgaagggc ttttgccaga
     1201 tcgggctcgc gaagacgttg tcgaccacga gggtcgcgcc ggcttccttg gcgatcctgg
     1261 ccaccgccgc gatgtcgatc acctcgaggg tcgggttggc ggggctttcc aggaagaaca
     1321 ccttggtttc cggccgcacc gcggcgcgcc acgcgtcgag gtcggtgccg tcgacgaggg
     1381 tcgacggaac gccgaagcgc ggcagcagct cggcgatgac gtagcggcac gacccgaaca
     1441 gcgcccgcgc cgcgacgacg tggtcgccgg cgcgcagctg gcccatcagc gacgccgtca
     1501 ccgccgccat gccggtggcc gtcgcgcgcg ccgcctcggc gccttcgaac gcggccatgc
     1561 gcttctcgaa catggtcacg gtcggattgg agaagcgtgc gtagatgaaa cccttgctct
     1621 gcccggcaaa gcgcgcctcg cattcctcgg cgctcggata gacgtggccc tgggtgagga
     1681 aaagcgcttc cgacgtctca ccgaactggg agcggaggct cccctc
//
LOCUS       DATAIQ010000831         4399 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_412732, whole genome shotgun sequence.
ACCESSION   DATAIQ010000831 DATAIQ010000000
VERSION     DATAIQ010000831.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4399)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4399)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4399
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_412732"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..209
                     /locus_tag="VHN20_13675"
     CDS             <1..209
                     /locus_tag="VHN20_13675"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HEX2726862.1"
                     /translation="TGSTLRTRPPEFKAQVAAELKAKVWPQIESGRIRVVTSQTFALA
                     EAARAHALMESARHTGKVLLLPQA"
     gene            357..1529
                     /gene="metK"
                     /locus_tag="VHN20_13680"
     CDS             357..1529
                     /gene="metK"
                     /locus_tag="VHN20_13680"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020091324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004478 - methionine adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006556 - S-adenosylmethionine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HEX2726863.1"
                     /translation="MLKGSNFQFTSESVSEGHPDKVCDQISDAILDAYLAQDANSRVG
                     LESLCTKNHIVLAGEVRSAAQLSPKDLEQIARETVRDIGYDFPGFDWRTVEVTVLAHS
                     QSPDIAIGVDAGKRKSEGAGDQGMMFGYACNETAELMPAPIYFAHRILQELAGARKSG
                     AAAGLRPDAKSQVTMRYANEKPVGIDTIVVSTHHSADLSQEDVRKLVLPVIETALPNG
                     WRCSPDRILVNPTGRFVVGGPESDTGLTGRKIIVDTYGGAALHGGGAFSGKDPTKVDR
                     SAAYAARYLAKNVVAAGLADRCLIQLAYAIGVPEPVSVYVQTDGGPGVPAEDISKALR
                     DLVDLTPRGIINQLELSRPIYKPTATYGHFGRPGDNAGFFTWERLDLVEGLRRALA"
     gene            complement(1681..2379)
                     /locus_tag="VHN20_13685"
     CDS             complement(1681..2379)
                     /locus_tag="VHN20_13685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726864.1"
                     /translation="MGRFVSIRGSGSWAHFPTRLLFLSLLLPCAALLGAVFLQPWMPA
                     VDVLRAPPAPTPGNLFAGAVGRLGGLLCVATASVCLFTALLAHIAGAGRSRSLFFVAA
                     ALFSIGLGVDASLRFSAGAAAAGKAQGISALVLAAGLMAYAAASWRFVLAGRATLLMT
                     GGMALAASEALPVAVSDPTPLWLFAEDALRFVGITFWTGFHIVAAAQSGEAFATGRVT
                     TVTLSPERIIRRAA"
     gene            2661..3359
                     /locus_tag="VHN20_13690"
     CDS             2661..3359
                     /locus_tag="VHN20_13690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015951743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HEX2726865.1"
                     /translation="MRTIAFVTQKGGSGKSTLCINLSVAAQQAGRTVCILEMDRQATV
                     SDWAEQRDEEGPEVAQVDATQVDAVIARLKGSGYDFVFIDTPGIDSAGTLSAIRNADL
                     CVIPCRPTPADLRAFKPTLAAIYRLDKRFAFVLNQTPPRSYRVRDAADGLAVLGVVPD
                     VNIVLRNDHQDAIGVGKGVTELNPDGPASQEIRQLWSWIEKRMKLGASPSLDTRAPAT
                     SAKRHQASRNAKAA"
     gene            3343..3672
                     /locus_tag="VHN20_13695"
     CDS             3343..3672
                     /locus_tag="VHN20_13695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015823558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribbon-helix-helix domain-containing protein"
                     /protein_id="HEX2726866.1"
                     /translation="MPKPPKPSLKAIVAQAVPAAQDAARVVRFRAETTGSGVRGRGTL
                     KERSKQLSVYLDPAVYEQLRDLAYTERTKIHPLMLEALDLLFSKRGALSIGELEARSG
                     AGFGGLG"
     gene            complement(3679..3933)
                     /locus_tag="VHN20_13700"
     CDS             complement(3679..3933)
                     /locus_tag="VHN20_13700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726867.1"
                     /translation="MPCYYFHAKFDGHLIRDERGDELADDEAALQRAVETARILLQAG
                     SRNARVWTGCVFEVTDEHGEPVWTVPMSRIAAMATRSPLP"
BASE COUNT          758 a         1524 c         1470 g          647 t
ORIGIN      
        1 atacggggtc gaccctgcgc acccgcccgc ccgagttcaa ggcgcaggtg gccgccgagc
       61 tcaaggcaaa ggtctggccg cagatcgaaa gcgggcgcat ccgcgtcgtg acgagccaga
      121 ccttcgccct cgccgaggcc gcccgggcgc acgctctgat ggagagcgcg cggcataccg
      181 gcaaggtcct gctgttaccc caggcctgag acgcgccggc cggcgccgcc gccgagatgt
      241 gggtggggtg atttgcgcca cccggaaggc tagggaattg ttggttttgc ggttgcggaa
      301 ccggcaggct ccgtctatcg ctcccccaac acaagcgaca aggacgtcga ggggccatgc
      361 taaagggcag caacttccaa ttcaccagcg agtcggtgtc cgagggccac cccgacaagg
      421 tctgcgacca gatctcggac gcgattctcg acgcctacct ggctcaggac gcgaattcgc
      481 gtgtcggcct cgagagcttg tgcaccaaga accacatcgt gctggccggc gaggtgcgca
      541 gcgccgcgca actgagcccc aaggatctcg agcagatcgc gcgcgagacg gtgcgtgata
      601 tcggctatga ctttcctggc ttcgactggc ggacggtcga ggtcaccgtt ctcgcccaca
      661 gccagtcccc ggacattgcc atcggcgtcg atgccggcaa gcgcaagagc gagggcgccg
      721 gcgaccaggg catgatgttc ggctacgcct gtaacgagac cgccgagctg atgccggcgc
      781 cgatctattt cgcgcatcgc atccttcagg agctcgccgg cgcgcgcaaa tccggcgcgg
      841 cggccgggct caggccggac gccaagtcgc aggtcacgat gcgctatgcc aacgagaagc
      901 cggtcggcat cgacaccatc gtggtctcga cgcatcacag cgccgatctg tcgcaagagg
      961 atgtgcgcaa gctggttctg ccagtgatcg agacggcttt gcccaacggc tggcgctgct
     1021 cgccggaccg catcctcgtc aatccgaccg gccgtttcgt ggtgggcgga cccgagagcg
     1081 acaccggcct gaccgggcgc aagatcatcg tcgacacgta tggcggcgcg gcgcttcatg
     1141 gcggcggcgc cttttccggc aaggacccca cgaaggtcga ccgctctgcg gcctacgccg
     1201 cgcgctatct ggccaagaac gtggtcgcgg ccggcctcgc cgaccgctgc ctgatccagc
     1261 tcgcctatgc catcggcgtg cccgagcccg tgtcggtcta cgtgcagacc gacggcggtc
     1321 ccggcgtgcc ggcggaagac atcagcaagg ccctgcgcga tctcgtcgac ctgacgccgc
     1381 gcgggatcat caaccagctc gagctttcgc gtccgatcta caagccgacc gcgacctacg
     1441 gccatttcgg ccggcctggc gacaatgccg gcttcttcac gtgggagcgt ctcgacctgg
     1501 tggaaggcct gcgccgcgcg ctggcatgac gcgggctccc ttccgcaagc gggagggacg
     1561 ccactcgggc gcgcgatcgg attgaaccgg tcggactgca ttcctctttg cgccgcatga
     1621 tcccggatcc tgtccgggac agccgcagcg gcaaagtggc gaccactttg ccggtcgtgc
     1681 ttaggccgcg cggcggatga tgcgttcggg cgacaaggtg acggtcgtca cgcggccggt
     1741 ggcgaaggcc tcgcccgact gcgcggccgc cacgatatgg aagcctgtcc agaacgtgat
     1801 gcccacgaat ctcagggcat cctcggcgaa cagccagagc ggcgtcgggt ccgacaccgc
     1861 cacgggcaag gcctcgctcg ccgccagcgc catgccgccg gtcatgagga gagtcgcccg
     1921 cccggccagg acgaaacgcc aggacgccgc ggcataggcc atgaggccgg ctgcgagcac
     1981 cagagccgag attccctgag ccttgccggc cgccgcagcg cctgctgaaa agcgcaggct
     2041 ggcgtcgacg ccgaggccga tcgaaaacaa ggcggccgcc acgaagaaca agctccggct
     2101 tcggcccgcg ccggcgatgt gagccagcag ggccgtgaac aggcagaccg aggcggtggc
     2161 gacgcacagc aggccgccga gcctgccgac ggcgccggcg aacagattgc ccggtgtcgg
     2221 cgccggcggc gcgcgcagca cgtcaacagc cggcatccac ggctgcagga acaccgcgcc
     2281 gaggagggcc gcacagggca gcagcaggct caggaacagc aggcgcgtcg gaaaatgcgc
     2341 ccacgaacca ctgccacgaa tcgatacgaa acgtcccact ctggaacacc tttttcgcct
     2401 cttaccagga ctgcgcaatc gccgtaccac gggccgtttg cagggagatc gcgggcagcg
     2461 atgctcgccg gcgtaagatt gcgttaacca tgacgttcca tgatcggccg gtagcttagg
     2521 gtattttgcg ggtcgcctga tcacaggatg acgggactgc tcaagcgatc gagagcccga
     2581 tcccgtctcg cgacccacgg accacgacat tgccaggcga cccggaccag cccgcttggg
     2641 tcctgaccga ggacgaattc atgcgaacga ttgctttcgt gacgcagaag ggtggcagcg
     2701 gtaagagcac gctgtgcatc aatctctcgg tcgccgccca gcaggcgggg cgcacggtct
     2761 gcatcctgga gatggaccgg caggcgaccg tcagcgactg ggccgaacag cgcgacgagg
     2821 aggggcccga ggtcgcccag gtcgacgcga cccaggtcga cgcggtgatc gcccgcctca
     2881 agggatccgg ctacgacttc gtcttcatcg acacgcccgg catcgacagc gccggcacgc
     2941 tgtcggcgat ccgcaacgcc gacctgtgcg tgatcccgtg ccggccgacc ccggccgacc
     3001 tgcgcgcctt caagccgacc ctggccgcca tctaccgcct cgacaagcgc ttcgccttcg
     3061 ttctgaacca gacgccgccg cgcagctacc gcgtgcgcga tgccgccgac ggcctcgccg
     3121 tcctcggcgt cgtgcccgac gtcaacatcg tgctgcgcaa cgaccaccag gacgcgatcg
     3181 gcgtgggcaa gggcgtcacc gagctcaacc cggatggccc ggcctcccag gagatcaggc
     3241 agctgtggtc gtggatcgaa aagcgcatga agctgggcgc gtcgccgtcg ctggacacgc
     3301 gcgcgccggc cacttcggcc aagcgtcatc aagcgagccg aaatgccaaa gccgcctaag
     3361 ccgagcctca aggcgatcgt cgcccaggcg gttccggccg cgcaggatgc ggccagggtc
     3421 gtccgtttcc gggccgagac gacaggctcc ggcgtgcgcg gccgcggcac cctcaaggag
     3481 cgctcgaagc agctctccgt ctatctcgat cctgcggtct acgagcagct tcgcgacctc
     3541 gcctacacgg agcgcaccaa gatccacccg ctgatgctcg aggcgctcga cctcctgttc
     3601 agcaagcgcg gcgccctctc gatcggcgaa ctggaggcga ggtcaggcgc ggggttcggc
     3661 ggtctcgggt gaagctcatc agggcagggg gcttctggta gccatcgcgg cgatccgcga
     3721 catcggcacc gtccagaccg gctcgccgtg ctcatccgtc acctcgaaca cgcagcccgt
     3781 ccacaccctc gcgttgcgcg agccggcctg caggaggatg cgagcggttt ccacggcccg
     3841 ttgcagcgcc gcctcgtcgt ccgcaagctc gtcgccgcgt tcgtcgcgga tcaggtgccc
     3901 gtcgaacttg gcgtgaaagt agtagcaggg catcggcggt ctcggcgcgt ctgccgtccg
     3961 ttatcgcgag gcggcgcctc ggagcaatcg gccgacacgg gaatgtgacg gggggcccaa
     4021 cagcacgcaa gccgtcccca tgtccatgga aacggctcgg ttctctcgaa aagccactgc
     4081 cagggcaagt ggataccccg ccgtgtcagg tccggacgcc gggcgtcccg gaagcggggt
     4141 cgattcggat tcaagcgacc ccgcgccaaa tcctttgcag cggcatgatc ctgtgcggcg
     4201 aagcggcgcc cacccccgga tcaggtccgg gggcagggct tcgctggatc atgctcagag
     4261 gctgcggagc tcgctgcgca ggcgctgcgc gttcacgatc gtgcgcgcat actggtccca
     4321 ggcgccgcgg gtccactggc agatgccggc cagcgtcacg acggtctttt ccaggtcctc
     4381 gagcgccgcg gcgttcttg
//
LOCUS       DATAIQ010000832         3206 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_250330, whole genome shotgun sequence.
ACCESSION   DATAIQ010000832 DATAIQ010000000
VERSION     DATAIQ010000832.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3206)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3206)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3206
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_250330"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            218..2659
                     /locus_tag="VHN20_13705"
     CDS             218..2659
                     /locus_tag="VHN20_13705"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase"
                     /protein_id="HEX2726868.1"
                     /translation="MHHKRRLLIALAMTGGIGVGLGTIASPAAAVQRTFELTLLGNIK
                     RTITLDIPADTPLDQVKVPGLKLPLLSLVETTSPSTPSGPLLSIKPTAPAQGAPAAPA
                     SPAAEAQDQLLDVLKPSKKKGKPSKGQPVFDSAGRLLSTQLPERERPTKTRLRHSNGV
                     PTLTNPALSLATLGPVPVGVPNFFINKFRIPPFLLSIYQAAGIQYGVRWEVLAAINEI
                     ETDYGRNLNVSSAGAMGWMQFIPSSWKSFGVDANGDGKKDPYNPVDAIFAAARYLKAA
                     GADQDLRKAIFAYNHADWYVDSVLMRARFIGGMPSDLVGSLSGLTQGLFPVHAAAKYA
                     DDISERDVNRRVARGKNAALPVEGVTTRRGINIFAKAGSPVVAVQDGKIVKVGQNKRL
                     GNFVMLRDVYGNTYTYAGLKKVASQVPVPKPKTQSKESIAKELALPKAEAAPKQAASA
                     GSNKVKSVVKKVVEPVVDATAKLTKERLFANPTRPNAMSAGGKEQLLESESALADGTS
                     IKSYFTGVYGLNRDDVVLKSLVPGRRVIAGTVLGRIGTTAKGVAPHTLFEIRPAGRGA
                     PRIDPKPILDGWKLLESTAIYRAQGKNPFFGEDARGATIGQIMLMSKDTLIQRVLANP
                     RIELYSCGRRDIEAGVVDRRVLAALEFLASSGLKPTITSLRCGHGLYTTAGNVSAHSS
                     GNAVDIAKINGIPIMGNQGAGSITDITVRRLLSLQGTMKPAQIITLMNYEGADNTLAM
                     GDHADHIHLGYRPQFDPSTKAGRLAESVLKPSQWFKLIDRLGQIDNPVIQLKPSKYAI
                     KTSQLGRASQAHKAE"
     gene            2693..>3206
                     /locus_tag="VHN20_13710"
     CDS             2693..>3206
                     /locus_tag="VHN20_13710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726869.1"
                     /translation="MTSESRRFRFVQFEFPWALGPEPGRYTIREQLGEPPAHVLVIAV
                     LGAPQHHLLPRRRRGRATAAPPDPAPEPVLTSRATLVDTEALAGYEAAAAWLAGADLD
                     ALAAAALARLNRVLHAHRIAAADPHAREVVRAQALVVRVGFGNGERVAEGRWDRAREL
                     ARAGPAALRPR"
BASE COUNT          521 a         1179 c         1046 g          460 t
ORIGIN      
        1 ggcgcgcgtg acccctaggc gccgatcggc cggcgcctgc gcgagccgca tgatgcaaac
       61 cgtcccttgc cgtcgtccgc ctcgcccgct gtaatgcggc cacgcgcgca gtgcttatcg
      121 cgggtttagc gttcgccgcc gattcccgat agtctgccgc gcacgcgcat cgggctcgcg
      181 tattcgggac acctccaggg gggagatgca ggaacacatg caccacaagc gtaggcttct
      241 catcgccttg gccatgaccg gcggcatcgg cgtcggtctt ggaaccattg cgtcaccagc
      301 ggcggccgtg cagcgcactt tcgagctcac gctccttggc aacatcaagc ggacgatcac
      361 gctggacatt ccggcggaca cgccgcttga ccaggtcaag gtccctggcc tgaagctgcc
      421 actgctgagc ctcgtcgaga cgacgtcgcc cagcacgccg tccggcccgc tgctgtccat
      481 caagccgacg gcgcccgcgc aaggggcccc ggccgctccc gcgtcgcccg ccgcggaggc
      541 acaggaccaa ctgctggacg tcctcaagcc gagcaagaag aagggcaagc cctccaaggg
      601 ccagcccgtc ttcgattccg ccggtcgtct tctgagcacg cagctgcccg agcgcgagcg
      661 ccccacgaag acccggctgc gtcactccaa cggcgtcccc accctcacga accccgccct
      721 gtcgctggca acccttgggc cagtgccggt cggcgttccg aacttcttca tcaacaagtt
      781 ccgcatcccg ccgttcctgc tgtcgatcta ccaggccgcc ggcatccagt acggcgtgcg
      841 ctgggaggtc ctggccgcga tcaacgagat cgagaccgac tacggccgca acctcaacgt
      901 ctcgtcggcc ggcgcgatgg gctggatgca gttcatcccg tcgagctgga agtccttcgg
      961 cgtcgatgcc aacggcgacg gcaagaagga cccctacaac ccggtcgacg cgatcttcgc
     1021 ggctgcgcgc tacctcaagg cagcgggcgc cgaccaggat ctgcgcaagg cgatcttcgc
     1081 ctacaaccac gccgactggt atgtcgattc cgtgctcatg cgggcacggt tcatcggcgg
     1141 catgccgtcc gacctggttg gctcgctgag cggcctgacg cagggcctgt tcccggtgca
     1201 tgccgcggcg aagtacgccg acgacatctc cgagcgcgac gtcaaccgcc gcgtggctcg
     1261 cggcaagaac gccgcgctgc cggtcgaggg cgtcacgacg cgtcgcggga tcaacatctt
     1321 cgcgaaggcc ggatcgccgg tcgtcgccgt ccaggacggc aagatcgtca aggtcggcca
     1381 gaacaagcgc ctcggcaact tcgtgatgct gcgcgacgtc tacggcaaca cgtacaccta
     1441 cgcgggcctg aagaaggttg cgtcgcaggt gccggtgccc aagcccaaga cgcagagcaa
     1501 ggagtccatc gccaaggagc tcgcgctgcc gaaggccgaa gccgcgccga agcaggccgc
     1561 gagcgccggt tccaacaagg tcaagagcgt cgtcaagaag gtcgtcgagc cggtcgtcga
     1621 cgccacggcg aagctcacga aggagcgcct gttcgccaac ccgacgcgcc ccaacgcgat
     1681 gtcggcgggc ggcaaggagc agctgctcga gtcggagtcc gcgctggcgg acggcacgag
     1741 catcaagtcc tacttcaccg gggtctacgg cctcaaccgt gacgacgtgg tcctcaagag
     1801 cctcgtcccc ggtcgccgcg tgatcgccgg cacggtgctg ggccgcatcg gcacgaccgc
     1861 gaagggcgtt gcgccgcaca cgctgttcga gatccgcccg gccggccgcg gtgctccgcg
     1921 gatcgatccg aagccgatcc tcgacggctg gaagctgctc gagtcgaccg cgatctaccg
     1981 cgcccagggc aagaacccgt tcttcgggga ggacgcccgc ggcgccacga tcggccagat
     2041 catgctgatg agcaaggaca cgctcatcca gcgcgtcctg gccaacccgc ggatcgagct
     2101 gtactcctgc ggtcgccgcg acatcgaggc cggggtggtc gaccgccgcg tgctcgctgc
     2161 gctggagttc ctcgcctcgt cgggcctgaa gcccacgatc acgtcgctgc gttgcggcca
     2221 tggcctgtac acgacggccg gcaacgtctc cgcgcactcg tcgggcaacg ccgtcgacat
     2281 cgcgaagatc aacggcatcc cgatcatggg caaccagggc gcagggtcga tcacggacat
     2341 caccgtccgc cgcctgctct cgctgcaggg cacgatgaag cccgcgcaga tcatcacgct
     2401 catgaactac gagggtgcgg acaacacgct ggcgatgggc gatcacgccg atcacatcca
     2461 tctcggctac cgcccgcagt tcgatccctc gacgaaggcc ggccggctcg ccgagtccgt
     2521 cctgaagccg tcgcagtggt tcaagctcat cgaccgcctc ggccagatcg acaatccggt
     2581 gatccagctg aagccgtcga agtacgcgat caagacgtcg cagctcggtc gcgccagcca
     2641 ggcgcacaag gccgagtagc tcacgtcaca tagggacgca cccgagaccg ccgtgacttc
     2701 cgagtcgcgg cggtttcgct ttgtgcagtt cgagtttccg tgggcgctcg ggcccgagcc
     2761 cgggcgctac acgattcgcg agcagctcgg cgagccgccg gcgcacgtgc tcgtcatcgc
     2821 cgtgctgggt gccccgcagc accacctgct gccgcgccgc cggcgcggcc gggcgaccgc
     2881 cgcgccgccc gacccggcac cggagccggt cctgacgtcg cgcgcgacgc tcgtcgacac
     2941 cgaagcgctc gccggctacg aggccgccgc ggcgtggctg gccggcgccg atctcgatgc
     3001 gctcgcggcc gccgcgctcg cccgcctgaa ccgcgtgctg cacgcccatc gcatcgcggc
     3061 cgccgatccc cacgcgcgcg aggtcgtgcg ggcgcaggcg ctcgtcgtgc gcgtcggctt
     3121 cggcaacggc gagcgcgtcg ccgaggggcg ctgggaccgc gcccgcgagc tggcgcgcgc
     3181 cgggcccgcc gcgctgcgcc cgcgca
//
LOCUS       DATAIQ010000833         1564 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_43082, whole genome shotgun sequence.
ACCESSION   DATAIQ010000833 DATAIQ010000000
VERSION     DATAIQ010000833.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1564)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1564)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1564
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_43082"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..587
                     /locus_tag="VHN20_13715"
     CDS             <1..587
                     /locus_tag="VHN20_13715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020185472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="GTPase"
                     /protein_id="HEX2726870.1"
                     /translation="LLFATLDPTMREVRLPGHGKAILSDTVGFVSDLPTELIAAFRAT
                     LEEVTAADLILHVRDIAHPDSEAQATDVAAVLGSLGLEEGSGPPLIEVWNKADMLDED
                     DRLAIAGEAARRDDVILISALTGEGGDVLRERIAMALTASAEEREVALPHDSGERIAW
                     LHAHGRVEDQSVAGDRMVLRVRMAPADWAKFEAL"
     gene            complement(584..1318)
                     /gene="mazG"
                     /locus_tag="VHN20_13720"
     CDS             complement(584..1318)
                     /gene="mazG"
                     /locus_tag="VHN20_13720"
                     /EC_number="3.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013166583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphate pyrophosphohydrolase"
                     /protein_id="HEX2726871.1"
                     /translation="MALERLAMIMRRLRDPVSGCEWDRAQDFASIAPYTIEEAYEVAD
                     AIERDDMDALADELGDLQLQVVFHAQMAAEAGHFTLDDVINRICDKLERRHPHIFGGA
                     EASPGWEALKAAERAVKGHDSALDGVALGLPALERAVKLQQRAARTGFDWPDASGARA
                     KVDEELAELDAETDPDRIEEELGDLLFAVVNLARKLSIAPEHALRKANSKFERRFRAI
                     EREPGFAAMTLDEQEALWVRAKRDSP"
BASE COUNT          256 a          512 c          527 g          269 t
ORIGIN      
        1 acctgctgtt cgcgacgctc gatccgacga tgcgcgaggt gcgcctgccg ggccacggca
       61 aggcgatcct gagcgacacg gtcggtttcg tgtccgacct cccgaccgag ctgatcgcgg
      121 cgttccgggc gacgctcgaa gaggtgaccg cggccgacct cattctccac gtccgcgaca
      181 tcgcccatcc cgacagcgag gcgcaggcga ccgacgtcgc cgcggtgctc ggctctctcg
      241 ggctggagga aggcagcggg ccgccgctaa tcgaggtgtg gaacaaggcc gacatgctgg
      301 acgaggacga ccgcttggca attgccggcg aagcggcccg gcgcgacgac gtcatcctga
      361 tctcggcgct gaccggcgag ggcggcgatg tcctgcgcga gcggatagca atggcgctca
      421 ccgcttcggc cgaggagcgc gaggtcgcgc tgccccacga ttcgggcgag cggatcgcct
      481 ggctccatgc ccatgggcgg gttgaggatc agtcagtggc gggcgaccga atggtgcttc
      541 gggtgcggat ggcgccggcc gactgggcga agttcgaggc tctctagggc gaatcgcgct
      601 ttgcgcgcac ccataaagct tcctgctcgt cgagggtcat tgccgcgaac ccgggctcac
      661 gctcgattgc gcggaagcgg cgctcaaatt tagaattcgc ttttcgtaga gcatgttccg
      721 gtgcgatgct gagcttccgc gccaggttga ccacagcgaa cagcaggtcc cccagctctt
      781 cttcgatgcg gtcgggatca gtctcggcat cgagctcggc cagctcctca tcgaccttgg
      841 cccgggcgcc ggacgcgtct ggccagtcaa aacctgtgcg ggcggcgcgc tgctggagct
      901 tcaccgcacg ctccagcgcc ggcaggccga gcgcgacccc gtcgagcgcg ctgtcatggc
      961 ccttgacggc gcgctcggcc gccttgagcg cctcccagcc ggggctggcc tcggcaccgc
     1021 cgaaaatgtg cgggtggcgg cgctcgagct tgtcgcagat gcggttgatc acgtcgtcga
     1081 gtgtgaagtg gccggcttcg gccgccatct gcgcgtggaa cacgacctgc agctggaggt
     1141 cgccgagctc gtcggcgagg gcgtccatgt catcgcgctc gatcgcgtcg gcgacctcat
     1201 aggcctcctc gatcgtatag ggggcgatcg aggcgaaatc ctgggcgcga tcccattcgc
     1261 agccactgac cgggtcgcgc agccggcgca tgatcatagc gagccgttca agcgccatta
     1321 gaggggaccc tacctcggaa atctgtaagt ctgataatat gcattatgta aagtccgccg
     1381 atatggggca ttgagataaa gcccctcagc cttctagcac gagccagcgg ccctcgacgc
     1441 cccagcgatc gagcgtcgac aggaaattca tgccgagcac gttgatgttg tccatctcgg
     1501 caatgtgcag ccgaacccgc cgccgctcga tcgcgccgat tgcgacttgg cccgcagtag
     1561 cgct
//
LOCUS       DATAIQ010000834         1592 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_250368, whole genome shotgun sequence.
ACCESSION   DATAIQ010000834 DATAIQ010000000
VERSION     DATAIQ010000834.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1592)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1592)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1592
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_250368"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..476
                     /locus_tag="VHN20_13725"
     CDS             <1..476
                     /locus_tag="VHN20_13725"
                     /inference="COORDINATES: protein motif:HMM:NF015445.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HEX2726872.1"
                     /translation="IRSPQSPVNLAVTKALGGIPIAIPYGEVYTAIQQKTIDGQENAV
                     INIYPARLYEVQKFMSMTNHLLSFTVLLMNEQLYSRLPEDQKQAVTAAAREAMDYQRQ
                     VSKRLSDELTAEMEKKGVQVNRPDLAAFRDAVAPIHQEHIGKSFSRELYDLVRAK"
     gene            486..1013
                     /locus_tag="VHN20_13730"
     CDS             486..1013
                     /locus_tag="VHN20_13730"
                     /inference="COORDINATES: protein motif:HMM:NF016200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HEX2726873.1"
                     /translation="MLRTYGHLRRAIETTTWVLTGLLVVLVVANVFARYVLEIGILWA
                     EELSRLAFVWVVFLGSYVALCRKGHMAMEVGVQQLPVAAQRPVLIASRFLVLIFLAAL
                     VFSGAKLVLTTVGFGRLSPILGISAGWGYLSVPVSAALMFLEVLRELIAGDLPPLTEA
                     EALKPGVTPEAEAAG"
     gene            1010..>1592
                     /locus_tag="VHN20_13735"
     CDS             1010..>1592
                     /locus_tag="VHN20_13735"
                     /inference="COORDINATES: protein motif:HMM:NF018513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HEX2726874.1"
                     /translation="MSTAAFTLFLCAFLALRIEIAFALGLGTLLYLLIFLPNLSLATI
                     AQQMYAGADSFSLTAIPFFVLVGELMTSGGISRRLVDFSHTIVGHLKGGMGIVELVSS
                     LIFASFSGSAVANAAGTGSITIPAMIQSGYPRGLAAAVESSSSSLGAILPPSIPLIVY
                     ASIAGVSVTGLFLGSYIPGLILSLGLAVVIRWQA"
BASE COUNT          239 a          534 c          503 g          316 t
ORIGIN      
        1 agatccgcag cccgcaaagc ccggttaacc tcgcagtcac caaggcgctt gggggcattc
       61 cgatcgcgat tccttacggc gaggtctata cggccatcca gcagaagacc atcgacgggc
      121 aggagaacgc ggtcatcaac atctatccgg cgcgcctcta cgaagtgcag aagttcatga
      181 gcatgacgaa ccatctgctc tccttcacgg tgctgctcat gaacgagcag ctctacagcc
      241 gcctgcccga agaccagaag caggccgtga ccgcggcggc gcgcgaagcg atggactacc
      301 agcgccaggt gtcgaagcgc ctctcggacg agctgaccgc cgagatggag aagaagggcg
      361 tccaggtgaa ccgcccggat ctcgccgcgt tcagggacgc ggtcgcgccg atccatcagg
      421 agcatatcgg caagagcttc agccgcgagc tctacgacct ggtccgcgcg aagtagagga
      481 ctgtcgtgct gcgcacctac gggcatttgc ggcgagcgat cgagacgacg acgtgggtcc
      541 tcacgggcct gctcgtcgtg ctcgtggtcg ccaacgtgtt cgcgcgctac gtcctcgaga
      601 tcggcatcct gtgggccgag gagctcagcc gcctcgcctt cgtgtgggtc gtcttcctcg
      661 gctcttatgt ggccctttgc cggaagggcc acatggcgat ggaagtcggc gtgcagcagc
      721 ttccggtggc ggcgcagcgg ccggtgctga tcgcatcgcg ctttctcgtg ctgatcttcc
      781 tcgcggcatt ggtcttctcc ggcgccaagc ttgtcctgac gaccgtcggc ttcgggcggc
      841 tgtctccgat cctcggcatc tcggcaggct ggggctatct cagcgtgccg gtatcggccg
      901 ctctgatgtt ccttgaagtg ctgcgcgagc tgatcgccgg cgacctgccg cccctgaccg
      961 aggcggaagc cctgaagccg ggggtgacgc ccgaggcgga ggccgccgga tgagcacggc
     1021 tgcgttcacc ctcttcctgt gcgcgtttct cgcccttcgc atcgagatcg ccttcgcgct
     1081 cggcctcggc acgcttctct acctcctcat cttcctgccc aacctgtcgc tcgcgacgat
     1141 cgcgcagcag atgtatgcgg gcgccgattc cttctccctc accgccattc cgtttttcgt
     1201 gctggtcggg gaattgatga catcaggcgg catttcccgg cgcctggtgg atttctctca
     1261 cacgatcgtc gggcacctga agggcgggat gggcatcgtc gagctggtct cgagcctgat
     1321 cttcgcgagc ttctccgggt cggccgtggc caacgcggcc ggcaccggca gcatcacgat
     1381 cccggcgatg atccagtcgg gctatccgcg cgggctcgcc gcggccgtcg agtcgtcgtc
     1441 gagcagcctc ggcgcgatcc ttccaccaag cattcccctg atcgtctatg cgagcatcgc
     1501 cggggtgtcc gtcaccgggc tcttcctcgg atcctatatc ccgggtctca tccttagcct
     1561 cgggctggcc gtcgttatcc gttggcaggc gg
//
LOCUS       DATAIQ010000835         1631 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_320400, whole genome shotgun sequence.
ACCESSION   DATAIQ010000835 DATAIQ010000000
VERSION     DATAIQ010000835.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1631)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1631)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1631
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_320400"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1463)
                     /locus_tag="VHN20_13740"
     CDS             complement(<1..1463)
                     /locus_tag="VHN20_13740"
                     /inference="COORDINATES: protein motif:HMM:NF012876.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HEX2726875.1"
                     /translation="MRIRDKVALVGGIPVVIAAAIAVTAWLLLSEAERARDGAVLAGA
                     AYRDLATVTTARNNYVLSAPAARDRHAKAFDDAAQSASRQLKALGTSARDSLHRMATS
                     EVGEALRRHREQMAELQAVSRRNDQLIGEMNARAAHVISLADTARERQHQSNADIIAS
                     LRDGDRRLRALRELVDRAFELRAAAASLEIQRLNGAAHRSQADPELSFSRARLRNAVL
                     DVVHVLRANNQSAAADELRTLARAHGVGAEAEQGPGGALAPWQELANWVERLTKVNAS
                     EHRALHDELAQLLTYSVAAAETEQATQNIAIATLKLGQRTAEALAARDATATGAMLAE
                     AQLLSRTMAALPISPLIQSEMIDAIERWREGLATTADGLRVQKDILQRMDATAESMIQ
                     EAGAINEMFGSEADRMGRFVQTILALGAALGLLLGSGTAFFVARSITRPVKRLEQHMR
                     ALAANPVGGMLPEAARGDELGAMARAANFFVTEIGRR"
BASE COUNT          235 a          575 c          549 g          272 t
ORIGIN      
        1 tcccgccgcc cgatctcggt gacgaagaag ttggcggcgc gcgccatggc gccgagctcg
       61 tcgccgcgcg ccgcttccgg aagcatgccg ccgactgggt tggcggcaag cgcccgcatg
      121 tgttgctcga gccgcttgac cgggcgcgtt atcgagcgcg cgacgaagaa cgcggtgccc
      181 gatccgagca gcaggcctag cgccgcgccg agcgccagga tggtctgcac gaagcggccc
      241 atccggtccg cctcgctgcc gaacatctcg ttgatggcgc cggcttcctg gatcatgctc
      301 tcggcggtcg catccattcg ctgcaggatg tccttctgaa cccggaggcc gtcggcagtc
      361 gtcgccagcc cctcccgcca gcgctcgatg gcatcgatca tctcactctg gatgagcggc
      421 gagatgggca gcgccgccat ggtcctggac agcagctgcg cctcggcaag catggcgccc
      481 gttgccgtcg cgtcgcgcgc cgccagcgct tcagccgtgc gttgcccgag cttcaacgtg
      541 gcgatggcga tattctgggt cgcctgttcg gtctcggccg ctgcaacgga ataggtcagc
      601 agctgggcca gctcgtcgtg cagcgcccga tgctcggacg cgttgacctt cgtcagccgc
      661 tcgacccagt tcgcgagctc ctgccacggc gccaacgcac cgcccggacc ctgctccgcc
      721 tcggccccga ctccgtgggc ccgggcgagc gtccgcagct cgtcggcggc cgcggattga
      781 ttgttggcgc gcagcacgtg gacgacgtcg agaacggcat tgcgcagccg cgcccgcgag
      841 aacgaaagct ccgggtccgc ttggctgcga tgcgcggccc cattcagccg ctggatttcg
      901 agcgatgccg cggccgcccg caattcgaac gcccggtcga cgagctcgcg cagcgcccgc
      961 agccggcggt caccgtctcg cagcgatgcg atgatatccg cgttcgactg gtgttgccgc
     1021 tcgcgcgccg tatcggcaag gctgatcacg tgagccgcgc gcgcattcat ctcgccgatg
     1081 agctgatcgt ttcgtcgcga cacggcctgc agctccgcca tctgctcgcg gtggcggcgc
     1141 agcgcctcgc cgacctcgct cgttgccatg cgatgcaggc tgtcgcgtgc gctcgttccc
     1201 agcgccttaa gctgccggct ggcgctttgc gcggcgtcgt cgaaggcttt tgcatgccga
     1261 tcgcgcgcgg cgggcgcgct cagcacgtaa ttgttgcggg cggtcgtcac ggtggcgagg
     1321 tcgcggtaag ccgcgcccgc gaggaccgct ccgtcgcgcg cgcgttcggc ctcgctgagc
     1381 agcagccaag cggtcacggc gatggcggcg gcaatgacaa ccggtatccc gccgaccagg
     1441 gcgactttgt cccgaattcg catgaaaccg tctgaacttc gaagcgggac agacatccga
     1501 tgcggagcgc cggccaagat gtgccgcagc gcacatacag cgttcagggc aagtccggcg
     1561 gcgtggtctc gacttcgccg gaaaagatca tgcggccgcg gcagcaacag gggagcatcc
     1621 aattttatcc c
//
LOCUS       DATAIQ010000836         3053 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_43319, whole genome shotgun sequence.
ACCESSION   DATAIQ010000836 DATAIQ010000000
VERSION     DATAIQ010000836.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3053)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3053)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3053
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_43319"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(138..302)
                     /locus_tag="VHN20_13745"
     CDS             complement(138..302)
                     /locus_tag="VHN20_13745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726876.1"
                     /translation="MQRIASDLSLARVVLSQAVVHHLHGDPEARVEIEIGEHAAQKKA
                     GSIQAGRIPL"
     gene            628..804
                     /locus_tag="VHN20_13750"
     CDS             628..804
                     /locus_tag="VHN20_13750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726877.1"
                     /translation="MVDKRSAHRTSARREARRLARQCRRFPVCTLLLGSLVLLGVASA
                     VTSIMAMSPVNGIP"
     gene            973..1449
                     /locus_tag="VHN20_13755"
     CDS             973..1449
                     /locus_tag="VHN20_13755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726878.1"
                     /translation="MRRLRTGSIAQPAVTRAQHVRQRRTARAAVALACLLGSVVAAIA
                     ADPIRLELNAAEVIQGRCRLSFVVENPSDQNIDGLTLDLVLFNREGSIQQRLLAELAP
                     VRRAKTMVKAFEVEGDCARIGSILLNDVTVCLPAAIGDCLDRLVLAARVPTIKFFK"
     gene            1628..2566
                     /locus_tag="VHN20_13760"
     CDS             1628..2566
                     /locus_tag="VHN20_13760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726879.1"
                     /translation="MLVGLAVAAAAWIVHSSPTFQRCMSNQPAGAGGQSLAERAADLL
                     ARLGPYQQCVGEFVYANGALMVALITIVLAVATVLAWQAGKSLLKTVEVQMKRAEAVA
                     AQQAHDVHAVITEARRAAEAAENIFVATQRPWVKVSIDVAGPLAYDETGANVAFRFTL
                     ENIGNSPARNVWVEARLIAQGIGVTDEPLSDARHIQRQLIAALKGRGPSPYGFVLFPK
                     DVAAQDIPFTIPQDELTRITQRVDFMHIQLVGAVDYCSGFSAEPHQTGFVVEVGRRNG
                     AADSASPPAPIYINEQDVAAEDLRLFRSMIHGSYAD"
     gene            2641..2889
                     /locus_tag="VHN20_13765"
     CDS             2641..2889
                     /locus_tag="VHN20_13765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726880.1"
                     /translation="MRNLITWSVRKLTETAPKLAFQVTASVAATLCVAFLSNAFVNTT
                     GRERAAAAPDVVIADFGAHLLKASFTEGGIRIRSSLSH"
     gene            2855..>3053
                     /locus_tag="VHN20_13770"
     CDS             2855..>3053
                     /locus_tag="VHN20_13770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726881.1"
                     /translation="MESVFAAAYPTEFDEVFGAAPDRLATGIAWPEPARATEAVQAQA
                     THPEKQLAGRPCTGDCGRKAVA"
BASE COUNT          490 a         1058 c         1003 g          502 t
ORIGIN      
        1 ggccgcgagc gccgcgcctg agaccatgat ccggcgcgtg ccggtccgga tctgtccggg
       61 cgcggcagcc gtgcgccgga cgcggccttg atccggactc tgccccggac ttgacccgcg
      121 gtcatgcgcc atgaaactca gagcgggatc cgtccagcct ggatcgatcc cgctttcttt
      181 tgggcagcgt gttcgccaat ttcgatttcg acgcgcgctt ccggatcgcc gtgaagatga
      241 tggacaaccg cctgggacag cactacccgt gccaggctca agtcgctggc gatgcgttgc
      301 atgcgcaaag gcggcggagg tgtagcgcgc ttccgccgga cgcgcaccac gcgcaactcg
      361 atcgcgttga tcggctagcg gcgccccggc gcccattgca catgcaaagc tccatcctgt
      421 cccatgagcc ctcgccgcga cgggcagatc agaagcgaga ggtgacgagg actccctgcc
      481 gttctgtgct gcggatcaca cgtcgcgacc ggctgtcgtg ataatccctg gcgcgaaatt
      541 ggccgtccgg cacaggcatc cctgctgccg cagcggtcga acatgatcat cgcgagggat
      601 gtcgccggga ccaagagggt ttgggtcatg gtcgacaaaa ggtcagctca ccgcaccagc
      661 gcgcgcaggg aagcgcggcg cctggcacgc cagtgccgcc ggtttccggt ctgcacgctg
      721 ctgctcggga gtctcgtgct gctcggcgtc gcgtccgccg tcacctcgat catggccatg
      781 agccccgtca acggcatccc gtagcggtcg cgcccgccgc ggaaaccggt ctcgggtgca
      841 cacgacggcc gtctccgcga tcagaatcgc ggcgagttgt gcgaacgtac cacaacgcca
      901 tcgcaccgca gtgttatgat cgtccgtcgt ccggtcccgg gcgacagcga ctttccttcg
      961 cgagccccag ccatgcgtcg cctccgaaca ggttcgatcg ctcagcccgc cgtcacgcgc
     1021 gcgcaacacg ttcggcaacg ccgcacggcg cgcgccgcag ttgcgctcgc gtgcctgctc
     1081 gggtccgtcg tcgccgccat tgccgcggat ccgatccgcc tcgagctcaa tgccgccgag
     1141 gtcatccagg gccgctgccg cctgtccttc gtggtcgaga acccgagcga ccagaacatc
     1201 gacggcctca cgctcgatct tgtccttttc aaccgcgagg gctcgatcca gcagcggctg
     1261 ctggccgagt tggcgccggt gcgccgggcc aagaccatgg tcaaggcgtt cgaggttgag
     1321 ggggactgtg cccgcatcgg ctccatcctg ctcaacgacg tgaccgtctg cctgccggcc
     1381 gccatcggcg actgcctcga ccggctggtg ctggccgcgc gcgtgccgac catcaaattc
     1441 ttcaagtgag cgcgcccggc tcggacccgt ccgcgtccgg ggcccccctg agggggacgg
     1501 ataatcgcac ccgccgcgca accgcaggca ccttggcgac atgaaataag ccgctaagct
     1561 gagccccagg ggaggcgacg ccggcgcggg gcttcgcatg cgtaaggggc gcagaggacg
     1621 cggattgttg cttgtcgggc tggctgtcgc cgcggcggcc tggatcgtcc acagctcgcc
     1681 gaccttccag cgctgcatga gcaatcagcc ggctggggcc ggcggccagt ccctcgccga
     1741 acgggccgcc gatctcctgg cccgcctcgg gccatatcag caatgcgtcg gcgagttcgt
     1801 gtatgccaat ggcgcgctga tggtcgcgct gattaccatc gtcctggcgg tcgcgacggt
     1861 tcttgcctgg caggcgggca aatcgcttct caagaccgtg gaagtgcaga tgaagcgtgc
     1921 agaagcagtc gcagcgcagc aggcgcacga cgtgcatgcc gtgatcaccg aggcgcgccg
     1981 ggcggccgag gccgccgaga acattttcgt cgcgacgcag cgcccctggg tcaaggtcag
     2041 catcgacgtc gccgggccgc tcgcctacga cgagaccggc gccaacgtcg ccttccgctt
     2101 cacgctcgag aacatcggca actcgcccgc caggaatgtc tgggtcgagg cccggctcat
     2161 cgcgcaaggc atcggagtca ccgacgagcc gttgtcggac gcccgtcaca tccagcggca
     2221 gctgatcgcc gcgctcaagg ggcgcggtcc gagcccctac ggcttcgtcc tgttccccaa
     2281 ggacgtcgcc gcgcaggaca ttccattcac gatcccgcag gatgagctga cgcgcatcac
     2341 acagcgggtc gacttcatgc acatccagct cgtcggcgcc gtcgactatt gctccggctt
     2401 cagcgccgag ccgcatcaga ccgggttcgt ggtcgaggtc gggcggcgca acggcgccgc
     2461 ggatagcgcg tcgccaccgg cgccgatcta catcaacgag caggacgtgg ccgccgagga
     2521 tcttcggctg ttccgctcca tgattcacgg cagctacgcg gactgagcgc cgccgccatg
     2581 gttttggctg aaacaggagt ttgaaattaa aacacctgtt tgatcaggcc cgaggatccc
     2641 atgcgcaacc tgatcacgtg gtccgtgcgt aagctcaccg agacggcgcc gaagctggct
     2701 ttccaggtga ccgcatccgt ggctgccacc ctgtgtgtcg cctttctgag caacgcgttc
     2761 gtgaacacca ctggccggga acgggccgcg gccgcgcccg acgtcgtcat cgccgatttc
     2821 ggtgcgcacc tgctcaaggc gagtttcacg gagggtggaa tccgtattcg cagcagctta
     2881 tcccactgag ttcgacgagg tcttcggcgc cgcgccggac aggttggcga ccggcatcgc
     2941 gtggcccgag ccggcgcgcg cgacggaggc ggtgcaggcg caggccactc atccggagaa
     3001 gcagctggcg gggcgcccgt gcacaggcga ctgcggccgc aaggccgtcg ctg
//
LOCUS       DATAIQ010000837         2237 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_320549, whole genome shotgun sequence.
ACCESSION   DATAIQ010000837 DATAIQ010000000
VERSION     DATAIQ010000837.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2237)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2237)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2237
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_320549"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..378)
                     /locus_tag="VHN20_13775"
     CDS             complement(<1..378)
                     /locus_tag="VHN20_13775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020095332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX2726882.1"
                     /translation="MADSGDLFDGARGGGAARNGSGKTNMKKPAAKPALTRGAASVAK
                     SKSMPAEAGYDASAIEVLEGLEPVRRRPGMYIGGTDEKALHHLFAEVIDNAMDEAVAG
                     HASFIEVELEESGALAVTDNGRGI"
     gene            626..2011
                     /locus_tag="VHN20_13780"
     CDS             626..2011
                     /locus_tag="VHN20_13780"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012453857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003849 - 3-deoxy-7-phosphoheptulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase class II"
                     /protein_id="HEX2726883.1"
                     /translation="MSERWTPDSWRAKPIQQVPAYPDAQALAGVEHQLAGFPPLVFAG
                     EARKLKRALANVAAGEAFLLQGGDCAESFAEHSADNIRDWFRVFLQMAVVLTFAGSCP
                     VVKVGRIAGQFAKPRSAPTETIDGAELPSYRGDIINDIEFTPGGRTPDPVRQISAYRQ
                     SAATLNLLRAFATGGYANLENAHRWMLGFVKDSPQSSRYQELAGRITEALDFMRAIGI
                     DPETHPEMRSTDIYTSHEALLLGFEQAMTRVDSTSGDWYATSGHMVWIGDRTRQPDHA
                     HVEYARGVKNPIGIKCGPSLKPDELLSLIDILNPTDEAGRITLICRFGDEKVFDHLPG
                     LVRAVKREGRTVVWSCDPMHGNTIKAASGYKTRPFEMIMREVQNFFAVHQAEGTHAGG
                     VHLEMTGKNVTECTGGARALTDADLHDRYHTYCDPRLNAEQALEIAFLTAELIKRERQ
                     GRTRPRVEAAE"
BASE COUNT          390 a          757 c          723 g          367 t
ORIGIN      
        1 gatgccacgg ccgttgtccg tcacggcgag ggcgccgctc tcctcgagct cgacctcgat
       61 gaagctggca tggcctgcca cggcctcgtc catggcgttg tcgatcacct cggcgaacag
      121 gtggtgcagc gccttctcgt cggtgccgcc gatatacatg cccgggcgcc ggcgaaccgg
      181 ctcgaggcct tccagcacct cgatcgccga ggcgtcgtag ccggcttcgg caggcatgct
      241 cttggacttt gcgaccgagg cggcaccgcg ggtcagcgcc ggcttcgcgg caggcttttt
      301 catgttggtt ttgccactgc cattgcgcgc ggcgccgccg ccgcgagcgc cgtcgaacag
      361 atcgccgctg tcggccattt tgcctttgcc cccgcgtgat tcgcgctgtt tcgcattata
      421 gctcatcggg cctcatatat gagaacgaaa ggtaaacgcc aagcgcgtcg tcgctgctca
      481 tgtggatgcg tttggataac ccggcgtcgg agcgccgttg ccgccccagg ctcgccttcg
      541 acgcccgatc tcgctataac ccgcgcctaa attgaggcgg aatggcgcgc taaagcaaaa
      601 cgccatgggc gaccaggaga aggcgatgag cgagcggtgg acacctgaca gctggcgggc
      661 gaagcccatc cagcaggtgc cggcttatcc cgacgcgcag gcccttgccg gcgtcgagca
      721 ccagcttgcc ggctttccgc cgctggtctt tgccggcgag gcgcgcaagc tcaagcgcgc
      781 ccttgcgaac gtggccgccg gagaagcctt cctgctgcag ggcggcgact gcgccgagag
      841 tttcgccgag cattcggcgg acaacatccg cgactggttc cgcgtcttcc tgcagatggc
      901 ggtggtgctc accttcgcgg gctcctgccc ggtcgtgaag gtcggccgta ttgccggaca
      961 gttcgccaag ccgcgcagcg cgccgaccga aacgatcgac ggcgcggagc tgccgagcta
     1021 ccgcggcgac atcatcaacg acatcgagtt cacgcccggc gggcgcacgc ccgatccggt
     1081 ccgccagatc tcggcctatc gccagtcggc cgccaccctc aacctcctgc gcgccttcgc
     1141 gacgggcggt tacgccaatc tcgagaatgc gcaccgatgg atgctgggct tcgtcaagga
     1201 cagcccgcaa tcatcgcgct accaggagct cgccggacgc atcaccgagg cgctcgattt
     1261 catgcgggcc atcggcatcg atccggagac gcatccggag atgcgctcga ccgacatcta
     1321 cacgagtcac gaggcgctgc tgctcggctt cgagcaggcc atgacgcgcg tcgactcgac
     1381 gagcggcgac tggtacgcga cctccggcca tatggtctgg atcggcgacc ggacgcgcca
     1441 gcccgatcat gcgcacgtgg aatatgcgcg cggcgtcaag aacccgatcg gcatcaagtg
     1501 cggcccgtcg ctcaagccgg acgagctgct gtcgctgatc gatatcctga atccgaccga
     1561 cgaagccgga cgcatcacgc tgatctgtcg gttcggcgac gagaaggtgt tcgatcacct
     1621 gccggggctc gtccgcgccg tgaagcgcga agggcgcacc gtcgtgtggt catgcgaccc
     1681 catgcacggc aacaccatca aggccgcttc gggctacaag acgcgtccgt tcgagatgat
     1741 catgcgtgag gtgcagaact tcttcgccgt gcaccaggcc gaagggacgc atgccggcgg
     1801 cgtgcatctc gagatgaccg gcaagaacgt caccgaatgc acgggcggcg cgcgtgcgct
     1861 gaccgacgcc gacctgcacg accgctatca cacctattgc gatccgcgcc tcaacgccga
     1921 gcaggcgctg gagatcgcgt tcctgacggc cgagctgatc aagcgtgagc gccagggccg
     1981 cactcggccg cgcgtggaag cggccgaata gcgcggcgcg attggcctca gcccgttcgg
     2041 acgctcaccg gaagaagaag aaccagagca gcaggacgat cggcaagggg atgccaacca
     2101 gccagagaag cgcggcgcga cccataatct aagctcccaa ggttactgtt gtccttttca
     2161 caacggcttt tgggcttggc ggttccggct ccggcagggc gtcaaggcca ggcgctcaag
     2221 cgcccgcatg gccgcgc
//
LOCUS       DATAIQ010000838         1773 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_458405, whole genome shotgun sequence.
ACCESSION   DATAIQ010000838 DATAIQ010000000
VERSION     DATAIQ010000838.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1773)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1773)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1773
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_458405"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            294..>1773
                     /locus_tag="VHN20_13785"
     CDS             294..>1773
                     /locus_tag="VHN20_13785"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008836707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-translocating pyrophosphatase"
                     /protein_id="HEX2726884.1"
                     /translation="MTDFLTDYGVIVALVCALAAVVYGLTTSRWLLAKSAGNDRMQEI
                     SKAVQEGAQAYLTRQYTIIGAVAIVLAILLAIALDIETAIGFVIGGILSAAAGFIGMN
                     VSVRANARVAETARGGIGGALDVAFKGGAVTGMLVAGLALLGVAGYYGILQIADLDER
                     DAVDALVGLGFGGSLISVFARLGGGIFTKAADVGADLVGKVEAGIPEDDPRNPAVIAD
                     NVGDNVGDCAGMAADLFETYAVTAVAVMLLGVIVFENVSAAAVYPLVIGGVSIIASII
                     GTFAVKSAAGNVERALYQGLIVSGVLAAAAFYPITKWLMDEQPFKEGASSLITGGGAP
                     PTAVELWVCTLIGVAITALLFVITDYYTSTRFRPVRTTARASQTGHATNIIQGLAQGF
                     QSTAAPAIVLALGILAANEIAGIYGIGVAVMAQLSLTGLIVALDAFGPITDNAGGIAE
                     MADLPEEVRNVTDPLDAVGNTTKAVTKGYAIGSAVLAALVLFA"
BASE COUNT          247 a          650 c          604 g          272 t
ORIGIN      
        1 tggcctatgc ccgcgaggcg cagggcggag gcgcccccgg aggcggcgag cccggtgggg
       61 aacccgaggc cgcgcccgag cagtcgcagg aggacgcaga acgcgccaag gcgcggtcga
      121 agctctggac gccgcccggc acctgattca ccggcttcgt ccgccgggcc ccgctagact
      181 gccccgccgt tgggggcgcc accctgtttg ggttcgcgcc ccgatctttg tctgcgctgg
      241 gcgccggaag ggcgaccacg cacggctgac cgacccacac cggaggcttc cccttgactg
      301 actttctcac cgactacggc gtcatcgtcg cgctcgtctg cgcgctcgct gccgtcgtgt
      361 acgggctcac aacttcgcgc tggctgcttg cgaagtcggc cggcaacgac cggatgcagg
      421 agatctcgaa ggccgtgcag gaaggcgcac aggcctacct cacccgccag tacacgatca
      481 tcggcgcggt cgcgatcgtg ctcgcgatcc tgctggccat cgcgctcgac atcgagaccg
      541 cgatcggctt cgtgatcggc ggcatcctgt ccgccgcggc cggcttcatc ggcatgaacg
      601 tgtcggtgag ggcaaacgcc cgcgtggccg agaccgcccg tggcggcatc ggcggcgcgc
      661 tcgacgtggc cttcaagggc ggcgccgtga ccggcatgct cgtggcgggc ctcgccctcc
      721 tcggcgtggc gggctactac ggcatcctcc agatcgcgga cctcgacgag cgcgacgcgg
      781 tcgacgccct cgtgggcctc ggcttcggcg gctcgctgat ctccgtcttc gcccgactcg
      841 gcggcggcat cttcaccaag gcggccgacg tcggcgccga cctcgtcggc aaggtcgagg
      901 cgggcatccc cgaggacgac ccgcgcaacc cggccgtgat cgccgacaac gtgggcgaca
      961 acgtgggcga ctgcgccggc atggcggcgg acctgttcga gacctacgcg gtcaccgccg
     1021 tcgccgtgat gctgctcggc gtgatcgtgt tcgagaacgt cagtgccgca gccgtgtacc
     1081 cgctcgtgat cggcggcgtg tcgatcatcg cctcgatcat cggcaccttc gccgtgaaga
     1141 gcgccgccgg caacgtggag cgcgcgctct accagggcct gatcgtctcg ggcgtcctgg
     1201 ccgcggccgc gttctacccg atcaccaagt ggctcatgga cgagcagccc ttcaaggagg
     1261 gcgcctccag cctgatcacc ggcggcggcg cgcccccgac ggcggtcgag ctgtgggtct
     1321 gcacgctcat cggcgtggca atcaccgcgc tcctgttcgt catcaccgac tactacacgt
     1381 ccacccgctt ccgcccggtg cggaccacgg cgcgggcgtc gcagaccggt cacgcgacga
     1441 acatcatcca gggcctcgcc cagggcttcc agtccaccgc ggcgcccgcc atcgtgcttg
     1501 cgctcggcat cctggcggcg aacgagatcg ccggcatcta cggcatcggc gtggcggtga
     1561 tggcccagct ctcgctgacc ggcctgatcg tggcgctcga cgccttcggc ccgatcaccg
     1621 acaacgccgg cggcatcgcc gagatggcgg atctgcctga ggaagtgcgc aacgtgaccg
     1681 acccgctcga cgcggtcggc aacaccacca aggcggtgac caagggttat gcgatcggct
     1741 cggccgtgct cgcggcgctc gtgctgttcg ccg
//
LOCUS       DATAIQ010000839         2947 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_413013, whole genome shotgun sequence.
ACCESSION   DATAIQ010000839 DATAIQ010000000
VERSION     DATAIQ010000839.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2947)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2947)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2947
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_413013"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..310)
                     /locus_tag="VHN20_13790"
     CDS             complement(<1..310)
                     /locus_tag="VHN20_13790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726885.1"
                     /translation="MPALDFTTDAATAADTTHTAIETADFPTGGDDLTIAGGVTVIVT
                     SGNLTLIAGDDVILQSGSRAIASGSVLVAIGGRSGDLDSLGGIQSHGLVQGTNVTFVG
                     F"
     gene            complement(659..2947)
                     /locus_tag="VHN20_13795"
     CDS             complement(659..2947)
                     /locus_tag="VHN20_13795"
                     /EC_number="1.1.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015933405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004470 - malic enzyme activity [Evidence
                     IEA];
                     GO_function: GO:0004471 - malate dehydrogenase
                     (decarboxylating) (NAD+) activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent malic enzyme"
                     /protein_id="HEX2726886.1"
                     /translation="MNEQRPIRRNRPTFTDQEALQFHSQGRPGKLEVVATKPMATQRD
                     LSLAYSPGVAVPVLAIAENPGCAYDYTAKGNMVGVVSNGTAILGLGNRGALASKPVME
                     GKAVLFKRFADIDAFDLEVGTEDPDEVINCVRFLGPTFGGINLEDIKAPECFIIEERL
                     RELMDIPVFHDDQHGTAIIAAAGLINALHLTGRDIASTRLVVNGAGAAGIASIELLKA
                     MGFAPNNVLLCDTKGVVYKGRSEGMNQWKSAHAAETSARSLEEAMRGADVVFGLSVKG
                     AFTPDMIRSMAPNPVIFAMANPDPEITVEEVAAIRSDAIMATGRSDYPNQINNVLGFP
                     YIFRGALDVRAKTINMEMKIAAAQALADLAREDVPDEVAAAYQGSRPRFGRDYIIPVP
                     FDPRLISMVPPAVAKAAMDTDVARKPIEDMHAYKAQLSARRDPVAGTLNRIYERVRKF
                     PKRVVFAEGEEEQVIRAAISFVNQGLGTAILVGREERITETAENAGIDLAGRDGIEIT
                     NARLSHRNSTYARFLYERLQRRGYLFRDCQRMINQDRNHFAASMVALGDADAMVTGVT
                     RNFSIALQDVRHVIDAKPGHRVIGVSICLSRGRTVLVADTAIHEMPSAQELAEIAIGA
                     AGVARRLGYDPRVALLSFSTFGHPKAERAEKIQEAVRILDTMRVDFEYDGEMSAEVAL
                     DRDQMAQYPFCRLTGPANVLIMPAFHSASISTKLLQELGGAMVIGPLLVGLDKPVQIV
                     SLGATDTDLVNMAVLAGYNVGG"
BASE COUNT          458 a          940 c         1038 g          511 t
ORIGIN      
        1 ggaagccgac gaaggtgacg ttcgtcccct gaacgagccc gtgcgactgg atcccgccaa
       61 ggctgtcgag atcgccgctg cggccaccga ttgcgacgag gacgctgccc gatgcgatcg
      121 cccgactgcc gctttgcagg atcacgtcat cgccggcgat cagcgtcaga ttgccagacg
      181 tgacgatgac ggtaacgccg ccggcgatcg tgagatcatc gccgccggtc gggaaatctg
      241 ccgtctcgat cgccgtgtgc gtggtgtcgg cagctgtcgc ggcatcggtc gtgaaatcga
      301 gagcgggcat ggatagctcc tctctccatg cctgaacccc gactcgaaag gcgggatgtt
      361 gttcgctcgc gggggaatgg gagcaaggcc acgcgggccc gctatgcgcc gctcaccccg
      421 ttgtccgaac agttatcgtc gcgatcgtgc ctgagttcgc ttattgccat cctgatggcg
      481 gagccaagtc gccgtcaaca cgcgcgggcc aaatacttcg tgagtgcggc aggcgtgcag
      541 cgatcatcat cgccgacgcg cgtcgacgtc ggtccgcggt acccaggaat ccagtgccct
      601 tttcggaatt tgctccgcca gcggtgacga tcgagcgtac gcgcgtccct taggaggctc
      661 agcccccgac gttgtagccg gcgagcaccg ccatgttgac gaggtcggta tcggtcgcgc
      721 cgagcgagac gatctggacc ggcttgtcga ggccgacgag cagcgggccg atcaccatgg
      781 cgccgcccag ctcctgcagc agcttggtcg agatcgaggc cgagtggaag gccggcatga
      841 tcagcacgtt ggcgggaccg gtcaggcggc agaacggata ttgcgccatc tgatcgcggt
      901 cgagcgccac ctcggccgac atctccccgt cgtattcgaa atcgacgcgc atcgtgtcga
      961 ggatgcgcac tgcctcctgg atcttctcgg cgcgctcggc cttggggtgg ccgaaggtgg
     1021 agaacgatag aagcgcgacg cgcggatcgt agccgaggcg gcgcgccacg ccggccgcgc
     1081 cgatggcgat ctcggcaagc tcctgcgcgc tcggcatctc gtggatggcc gtgtcggcaa
     1141 cgagcacggt gcgtccgcgc gacaggcaga tcgacacgcc gatcacccgg tggccgggct
     1201 tggcatcgat cacatggcgc acgtcctgca gcgcgatcga gaagttgcgc gtgaccccgg
     1261 tgaccatcgc gtcggcgtcg ccgagcgcca ccatcgacgc ggcgaagtgg ttgcggtcct
     1321 ggttgatcat gcgctggcag tcgcgaaaca ggtagccccg ccgctgcagc cgctcgtaga
     1381 ggaagcgcgc gtaggtggaa ttgcggtgcg agaggcgcgc gttggtgatc tcgatgccgt
     1441 cgcgcccggc gagatcgatg ccggcattct cggccgtctc ggtgatgcgc tcctcgcgcc
     1501 cgaccaggat ggcggtgccg agaccctggt tgacgaacga gatcgcggcg cggatcacct
     1561 gctcctcctc gccctccgcg aacacgacgc gtttcgggaa cttgcgcacg cgctcgtaga
     1621 tgcggttgag cgtgccggcg accgggtcgc ggcgtgccga cagctgcgcc ttgtaggcgt
     1681 gcatgtcctc gatcggcttg cgcgcgacgt ccgtgtccat cgccgccttg gcgacggccg
     1741 gcggcaccat cgagatgagg cgcgggtcga acggcaccgg gatgatgtag tcgcgcccga
     1801 atcgcgggcg cgagccctga taggccgcgg ccacttcgtc gggcacgtct tcgcgcgcga
     1861 gatcggcgag cgcctgcgcg gcggcgatct tcatctccat gttgatggtc ttggcgcgga
     1921 cgtcgagggc gccgcggaag atgtacggga atccgagcac gttgttgatc tggttcgggt
     1981 agtcggagcg tccggtggcc atgatggcgt cgctgcggat cgccgccacc tcctcgaccg
     2041 tgatctcggg atcggggttg gccatcgcga agatgaccgg gttcggcgcc atcgaacgga
     2101 tcatgtcggg cgtgaaggcg cccttgaccg acaggccgaa cacgacgtcg gcgccgcgca
     2161 tcgcctcctc gaggctgcgc gcagaggtct cggcggcatg cgccgacttc cactggttca
     2221 tgccttcgct gcggcccttg tagacgacgc ccttggtgtc gcacaggagc acgttgttgg
     2281 gcgcgaaacc catcgccttg agcagctcga tcgaggcgat gccggcggct ccggcgccgt
     2341 tgaccaccag cctggtcgaa gcgatgtcac gtccggtgag atgcagcgcg ttgatcagcc
     2401 ccgcggccgc gatgatggcg gtgccgtgct ggtcgtcatg gaataccggg atatccatga
     2461 gctcgcgcag gcgctcctcg atgatgaagc attccggcgc cttgatgtcc tcgaggttga
     2521 tgccgccgaa ggtcgggccg aggaagcgca cgcagttgat cacctcgtcc gggtcctcgg
     2581 tgccgacctc gaggtcgaag gcgtcgatgt cggcgaagcg cttgaacagg acggccttgc
     2641 cctccatcac gggcttcgag gcgagcgcgc cgcggttgcc gaggccgaga atggcggtgc
     2701 cgttggagac gacgccgacc atgttgccct tggcggtgta gtcgtaggcg cagcccggat
     2761 tttcggcgat ggccagcacc ggcacggcga cgcccggcga ataggcgagc gacagatcgc
     2821 gctgcgtcgc catcggcttg gtggccacca cctcgagctt gccggggcgg ccctgcgagt
     2881 ggaactgcag cgcctcctga tcggtgaagg tcggccggtt gcggcggatc gggcgctgct
     2941 cgttcat
//
LOCUS       DATAIQ010000840         3404 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_458416, whole genome shotgun sequence.
ACCESSION   DATAIQ010000840 DATAIQ010000000
VERSION     DATAIQ010000840.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3404)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3404)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3404
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_458416"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..279
                     /locus_tag="VHN20_13800"
     CDS             <1..279
                     /locus_tag="VHN20_13800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014496636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEX2726887.1"
                     /translation="IGMALHEETLYDHRFGRVMNANIAEYHVPVHADVHDIEVIFIDE
                     PDDKINPLGIKGVGEIGIVGVAAAVANAVYHATGKRVRNLPITLDKLD"
     gene            498..1187
                     /locus_tag="VHN20_13805"
     CDS             498..1187
                     /locus_tag="VHN20_13805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011474674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin III family protein"
                     /protein_id="HEX2726888.1"
                     /translation="MSRARQDPADDSTSSPGSVWWPYDRTEIVADAIVHGLGVLAGVA
                     GIIVLVALAAGRVGPWELTSLLTYGGALLAMLVASALYNLWPVSPAKWVLRRFDHSAI
                     YLLIAGTYTAFISQMRVGWESIVLLIGIWVTALAGSAIKLRYPGRFDRLSVVLYLVAG
                     WSGLMAYEALAGLPDSTVRLIVLGGVLYTVGVIFHAWRSLRFQNAIWHGFVLAAAGCH
                     YGALLDCMVLT"
     gene            1356..1577
                     /locus_tag="VHN20_13810"
     CDS             1356..1577
                     /locus_tag="VHN20_13810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726889.1"
                     /translation="MPPDQRPPHPAAAAVKKVALFLAIMIAAFVVMYEIAVYLLGSGN
                     DVIVTAVAALSALLASMINDRVWRNVQRS"
     gene            complement(1579..2023)
                     /locus_tag="VHN20_13815"
                     /pseudo
     CDS             complement(1579..2023)
                     /locus_tag="VHN20_13815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011581210.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1003 domain-containing protein"
     gene            complement(2493..>3404)
                     /locus_tag="VHN20_13820"
     CDS             complement(2493..>3404)
                     /locus_tag="VHN20_13820"
                     /inference="COORDINATES: protein motif:HMM:NF012573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005509 - calcium ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HEX2726890.1"
                     /translation="SGNDRIFGDAGNDQMFGNAGNDFLDGGSGADTMRGGTGHDTYVV
                     SNSGDLVIESFGQGIDLVFSSRASFTLGANVENLTIFGLTGFNGTGNSLNNVMIGNGN
                     ANLMSGLNGDDRISGNSGNDRLFGGNGNDRLSGGNQHDLLDGGLGSDVLGGGAGRDTL
                     IGSFGNDILLGGADGDLLVGGFGRDIMSGGSGGDVFRFLSVSDSPPSPNPFLTEDIIR
                     DFDRLQGDRIDLRAIDADVTTGANEAFIFDVIANSSPAKGHLSWFLGTSGEVFVQGNV
                     DNDEDIEIQFRVFGSAVPGSQAGDYLL"
BASE COUNT          544 a         1095 c         1117 g          648 t
ORIGIN      
        1 atcggcatgg ccctgcacga ggaaaccctc tacgaccacc gcttcggccg cgtcatgaac
       61 gcgaacatcg ccgaatacca cgtgccggtg cacgccgacg tgcacgatat cgaggtgatt
      121 ttcatcgatg agccggacga caagatcaat cccctcggca tcaagggggt cggcgagatc
      181 ggcatagtcg gcgtcgcggc ggcggtcgcc aatgcggttt atcacgcgac cggtaagcgc
      241 gtgcgcaacc tgccgatcac cctcgacaag ctggactgac gcccccgcga cgagccgcgg
      301 ccggctgtcg ttggcaccac cgccgtatga gacgcccctt cgcgcgagtg acaaaccgtg
      361 cgagcgcctc ggctgccgga aggtcaacag tcgtgacgcc ggagccgact cccgttaagc
      421 tggagccggg gctttcgttt gacgccacgg gcaagcgcgg cgggcctctc ggccgagcca
      481 tagcgggggt cgcacggatg tcgcgcgcga ggcaggatcc agccgacgat tcgacctcgt
      541 caccgggcag tgtctggtgg ccgtacgatc ggacggagat cgtggccgac gccatcgtgc
      601 acggcctcgg cgtgttggcg ggggtcgcgg gcatcatcgt cctggttgca ttggccgcgg
      661 gacgggtcgg gccgtgggag ctgacctccc ttctgaccta tggcggcgcc ctgctggcga
      721 tgctcgtcgc ctcggcgctc tacaatctgt ggccggtgtc tccggccaaa tgggtgctgc
      781 gccgcttcga ccactcggcg atctatcttt tgatcgccgg cacctacacg gcattcatct
      841 cacagatgcg ggtcgggtgg gaatcgatcg tacttctgat cgggatctgg gtgacggcac
      901 tggccggctc cgcgatcaag ctccgctacc ccgggcgctt tgaccgtctt tcggtcgttc
      961 tctacctggt cgcaggctgg agcgggttga tggcgtacga ggccctcgcg ggtttgcccg
     1021 actcgacggt tcgcctgatc gtgctcggcg gcgttctcta caccgtcggc gtgatcttcc
     1081 acgcgtggcg gagcctgcgt ttccagaacg cgatctggca tggcttcgtg ctcgccgccg
     1141 ccggctgcca ttatggggcg ctgctcgact gcatggtgct gacctagggt tgctcgcttc
     1201 agattactcc tgctgtgatt gcttttagcg catgatcgtg tccgatgcag cggtggcgac
     1261 ttcgcccgac catgctgtag aggagaggtc ctgacctggc ctcaaccagg tgcgaggctg
     1321 cacctgtccc gacagccatg cggagaagtt cgattttgcc ccccgaccaa aggccgcccc
     1381 atccggcggc ggcggccgtc aagaaggttg ccctgtttct tgcgatcatg atcgcggcct
     1441 ttgtcgtgat gtacgagatt gccgtctatc tgctgggcag cggcaacgac gtgatcgtca
     1501 ctgcggttgc ggccttgtca gccttgctcg cgtccatgat caacgaccgg gtctggcgca
     1561 acgtgcagcg aagctagttt atcgccgaac cccttcgatc tcgtcgagaa ccgcttcggg
     1621 cgcgacgccc tgcttgatcc cctccatctc cgcgtcggct tccgttgtga cgccgacgcg
     1681 ctcggcgatg gccgccacga gagcggcgag cctgctcacc tcgtgcccgg ccagcaggct
     1741 gatctgcaga tcgagatcgg cgcgtttgtc ggccaacgcg gccgggcggt tctggctgat
     1801 cagcacaaag gtcgacagga agatcgcctc gacggacgct gggaatgccc ggaaccccgc
     1861 cgagattggc gacgatccgg aagccgaacg cggccagatg catgtagacg aaggtcatgc
     1921 tgccggtgaa gcgggtgatc gcgtcggcga gccggttctg cattgatgct cgcggctcgt
     1981 cccgctcgcg gcgctccttg agggaccgga tattgcgcgc cagaaccgtg ccgagcccgc
     2041 tcgccggcgg gggtaggtag gtaggggcac caagggtgtc ggtcgccgtg cgcggcaggg
     2101 ccgtcacgtg ttgccaggtc tttaatcgat ctgtcgaccg cccctgcttc aatgccggcc
     2161 aacggcttcg cgtcccccgc cgtaggcccg ctcgccgggg gcatgggctt tcggttgtga
     2221 gtgccggaga aagcgccgaa cagagtgacc tttgtccgga ttgcgaggca cgcgcgatcg
     2281 gagcgggcgc gattcgacgc cgaatcgatc ccgctccggg agcttggcac gtcgccggta
     2341 gttaagcggg gcggctgcgg ccctccgtcc ccggcaaggt ggatgcagct tgcctcagac
     2401 ccttggcgcc aatcggcgac cgccacaagc tgctgggagc cggacagacg cacccgttca
     2461 tccaggtgca tgcctgcgcc cgcgctcggc gcttacagga ggtagtcgcc cgcctggctt
     2521 cccgggacgg ccgacccgaa gacgcggaac tgaatttcga tgtcttcgtc gttgtcgacg
     2581 ttgccctgca cgaagacctc cccgcttgta cccagaaacc aactgagatg gcccttcgcc
     2641 ggcgaactgt tggcaatcac gtcgaagatg aaggcctcat tggcgccggt ggttacatcc
     2701 gcgtcgatgg cgcggaggtc gatccggtcg ccctgaagcc tgtcgaagtc gcggatgatg
     2761 tcctccgtga ggaagggatt cgggctgggc gggctgtcgg ataccgagag gaacctgaag
     2821 acatcgcctc cggaaccgcc ggacatgatg tctcggccga atccgcccac cagcaggtcg
     2881 ccgtcagcgc cgccgagcag gatgtcgttg ccgaagctac cgatgagggt gtcgcggccg
     2941 gccccgccgc ccaggacgtc gctgcctaga cccccgtcga gcagatcgtg ctggttgccg
     3001 ccggacaggc gatcattgcc gttaccgccg aacagacggt cgttgccgga gttgccgctg
     3061 atcctatcat cgccgttcaa gccgctcatg aggttggcgt tgccgtttcc gatcatcacg
     3121 ttgttcaggc tgttgccagt gccattgaac ccggtcagcc cgaagatcgt caggttttcg
     3181 acattggcgc cgagagtgaa ggacgcgcgc gagctgaaga cgaggtcgat cccctggccg
     3241 aaggattcga tcaccaaatc cccggaattt gagacgacgt aggtgtcgtg acctgttccg
     3301 ccgcgcatgg tgtcggcgcc gctgcccccg tccagaaagt cattgccggc gttgccaaac
     3361 atctgatcat tgccggcatc gccgaatatc cggtcgttac cact
//
LOCUS       DATAIQ010000841         2246 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_320582, whole genome shotgun sequence.
ACCESSION   DATAIQ010000841 DATAIQ010000000
VERSION     DATAIQ010000841.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2246)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2246)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2246
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_320582"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..560)
                     /locus_tag="VHN20_13825"
     CDS             complement(<1..560)
                     /locus_tag="VHN20_13825"
                     /inference="COORDINATES: protein motif:HMM:NF016764.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0031267 - small GTPase binding [Evidence
                     IEA];
                     GO_process: GO:0006888 - endoplasmic reticulum to Golgi
                     vesicle-mediated transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Yip1 family protein"
                     /protein_id="HEX2726891.1"
                     /translation="MNNVVDRAKNIVVTPKTEWAVVDAEPASVQDIYTRYLVPLALIP
                     AVAGFIGMAIVGISIPGLGTIRTGFFASVMQAILQFGVSLAMVYLFAVIIDALAPTFG
                     GQRNPLAAFKVSAYSMTPAFLAGIFSLIPALSFLGIVGLYAIYLLYLGLPRLMRAPDD
                     KAVAYTAVVVVAAIALWIVIFGILAF"
     gene            785..>2246
                     /locus_tag="VHN20_13830"
     CDS             785..>2246
                     /locus_tag="VHN20_13830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2726892.1"
                     /translation="MERNPVRFVWKTTRALHAAAIGLLLLAIPVLWLGLDLVRVAIDD
                     AIAGRAFAGQSTAPFLRVALTLPERIAEEPIVLLKGIPLERGKFVMATVAVLLGVALA
                     LSIGALLFGAIQSVAGARVLARLRRTIVDGIVGARPSARDDVQHAAALAGEGLAREGA
                     FLGTAVLTPALGATVIAVALTYAGSVDWWLSVALVLTLLIIAFVWPRRLDALSRLSDN
                     RLGEGAALRRLLIDLGRRLPAMRAHGTAGFERSRVSEDLAQRRQTARPAERDASAAAA
                     LTTLASAFVLVAIVAAGAWVGPARGITAGEMAAVLAAAAAAVLALDRMMDWQRALEAS
                     RRLFEEIARALGGFQSRGRGAHGGALSGSGALAAEGVAAYDPATGARITGVNLSIVMP
                     AHVALVDGSGGAARVFAALIGGQIDPSVGRLTFAGADLPFTDPVERARRIAYAGGDTI
                     LIAGSLRQNLLYGCRDAAAADIEQRLLEAVTTAGLDG"
BASE COUNT          326 a          775 c          789 g          356 t
ORIGIN      
        1 ataaatgcaa ggatgccaaa gatcacgatc cacagggcga ttgccgcgac caccacgacc
       61 gccgtgtagg cgaccgcctt gtcgtccggc gcgcgcatca ggcgcgggag cccgaggtag
      121 agcaggtaga tcgcgtagag accgacgatg ccgaggaacg acagcgccgg aatcagggag
      181 aagatgccgg cgagaaaggc cggcgtcatc gaataggcgg agaccttgaa ggcagccagc
      241 gggttcctct ggccgccgaa ggtcggcgcg agcgcgtcga tgatcacggc gaacagatag
      301 accatcgcca gagagacgcc gaactgcagg atggcctgca tcacactggc gaagaagccg
      361 gtgcggatcg tgccgaggcc cggaatgctg atcccgacga tcgccatgcc aatgaagccg
      421 gcaacggcgg ggatcaaggc aagcggaacc agataacgcg tgtagatgtc ctgaacgctc
      481 gccggctcgg catcgacgac ggcccactcc gtcttcggcg tcaccacgat gtttttcgcg
      541 cggtcgacaa cattgttcat gattagtccc ccagtccggt ccgctacgtc agcttgacat
      601 taagcatgtc ccttgattcg gcgtagcgac agcccgtgcc tcttaccagc ctcccggctc
      661 ggctgctaat cgcttggcgc ccgttgccga ctgtcatatc tgggcgccgg ccagggcttc
      721 ggttgcgcca gggggggccg gccgggtaac ttggccatat ccgaattcct cgccaggacc
      781 tttcatggag cgtaacccgg ttcgtttcgt ctggaagacc acgcgcgcgc tccatgccgc
      841 ggccatcggt ctgttgctgc tcgccatccc ggtcctgtgg ctcgggctcg acctcgtccg
      901 ggtggcgatc gacgacgcca tcgccggccg tgctttcgcc gggcaatcga cggcgccgtt
      961 cctgcgcgtc gcgctcacct tgcccgaacg gatcgccgaa gagccgattg tgctcctgaa
     1021 aggaattccg ctcgagcgcg gcaagttcgt gatggcgacg gtcgccgtgc tgctgggggt
     1081 cgccctggcg ttgtcgatcg gcgccctcct gttcggagcg atccaatcgg tggccggcgc
     1141 gcgcgtcctc gcccggctgc ggcggaccat cgtcgacggc attgtgggcg cacgcccctc
     1201 ggcgcgggac gacgtgcagc acgccgcggc ccttgccggc gagggcctcg cgcgcgaggg
     1261 cgcgttcctc ggcacggccg tgctcacgcc cgcattgggc gcgaccgtca tcgcggtcgc
     1321 gctcacctat gccggctcgg tcgactggtg gctctcggtg gcgctcgtcc tgacgctgct
     1381 gatcatcgcc ttcgtctggc cgcgccgcct cgacgcgctc agccgcctca gcgacaaccg
     1441 gctcggcgag ggagcggcgc tgcggcgcct gctcatcgat ctgggaagac gcctgccggc
     1501 catgcgtgcc cacggcacgg ccgggttcga acggagccgc gtcagcgagg atcttgccca
     1561 gcgccgccag acggcgcggc cggccgaacg ggacgcgagc gccgcggccg cccttaccac
     1621 ccttgcatcg gcattcgtgc tcgtcgcgat cgtggcggcg ggcgcatggg tcgggccggc
     1681 acggggcata accgcgggcg aaatggccgc cgtgctggcg gcggcagccg ccgcggtgct
     1741 ggcgctcgac cgcatgatgg actggcagcg cgccctggaa gcctcgcggc gcctgttcga
     1801 ggagatcgcg cgcgccctcg gcggcttcca gtcgcgcggg cgcggggcgc atggcggcgc
     1861 gctgtccggc tcgggcgccc ttgccgccga gggggtcgcg gcctacgatc cggcgacggg
     1921 cgcacgcatc accggcgtca acctgtcgat cgtgatgccg gcgcatgtcg cccttgtcga
     1981 cggctcaggc ggcgcggcgc gggtgttcgc cgcgctgatc ggcggccaga tcgatccgtc
     2041 cgtcgggcgc ctcaccttcg cgggcgccga tctgcccttc acggacccgg tggagcgggc
     2101 gcgccgcatc gcgtatgccg gcggcgacac catcctgatc gccgggtcac tgcgccagaa
     2161 cctgctgtat ggatgccggg acgcggccgc cgccgacatc gagcaacgcc ttctcgaggc
     2221 ggtgacgacg gcgggcctgg acggtt
//
LOCUS       DATAIQ010000842         1924 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_342155, whole genome shotgun sequence.
ACCESSION   DATAIQ010000842 DATAIQ010000000
VERSION     DATAIQ010000842.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1924)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1924)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1924
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_342155"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..612
                     /gene="dapF"
                     /locus_tag="VHN20_13835"
     CDS             <1..612
                     /gene="dapF"
                     /locus_tag="VHN20_13835"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015926942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008837 - diaminopimelate epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HEX2726893.1"
                     /translation="DPVMARPSGKSLLLETKAGLLPVARVSEREFTVDMGKPHLRWDE
                     IPLRDPFQDTRYIELQIGPIDDPILHSPSVVSMGNPHAIFWVDNVAAYDLGRIGPLLE
                     NHPIFPERANISLAEIRSPEHIVLRVWERGAGLTKACGSAACAALVAAARKKLTGRKA
                     TVTLPGGDLTIEWRASDDHVLMTGPVELEHEGTFAPALFAGAA"
     gene            612..1859
                     /gene="mtaB"
                     /locus_tag="VHN20_13840"
     CDS             612..1859
                     /gene="mtaB"
                     /locus_tag="VHN20_13840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-
                     methylthiotransferase MtaB"
                     /protein_id="HEX2726894.1"
                     /translation="MAVEVVTFGCRLNTYESEAMRAQAEAAGHEQLVIVNTCAVTAEA
                     TRQARQTIRKLARENPDAKIVVTGCAAQVEPQTFAAMPEVTQVVGNHEKMQAATWRRL
                     DDVADDEKIRVNDIMAVRETAVHLIDGMRGRTRAFVQVQNGCDHRCTFCIIPFGRGNS
                     RSVAMGVVVDQVRTLVEHGTREVVLTGVDITSYGKDLPGAPKLGALVKNILRHVPELE
                     RLRISSIDSVEADADLLDALAREERLMPHLHLSLQAGDDLVLKRMKRRHLRDDAIRFC
                     NDVRRLRPDVVFGADLIAGFPTEGEDMFARSLDIVDACGLTHLHVFPFSPRPGTSAAR
                     MPQVARDVVKDRARRLRDKGEAALRKHLASEIGARRRVLTETDRLGRTEGFTLVRFET
                     PVRPGEILDVAIGGHDGRELLAA"
BASE COUNT          311 a          670 c          661 g          282 t
ORIGIN      
        1 gaccctgtca tggcccgccc gtccggcaag agccttctct tggaaacgaa ggccgggctc
       61 ctgcctgtcg cgcgggtgtc ggagcgcgag ttcacggtcg atatgggcaa gccgcacctg
      121 cgctgggacg agatcccgct gcgcgacccg ttccaggaca cgcgctacat cgagctgcag
      181 atcgggccga tcgacgatcc gatcctgcat tcgccctcgg tcgtcagcat gggcaatccg
      241 cacgccattt tctgggtcga caacgtcgcc gcgtacgatc tcgggcgcat cgggccgctg
      301 ctcgagaacc atccgatctt ccccgaacgc gccaacatct cgctggcgga gatccgcagc
      361 cccgagcaca tcgtgctgcg cgtgtgggag cgcggcgccg gcctcacgaa agcgtgcggc
      421 tcggcggcct gcgcggcgct cgtcgccgcc gcgcgcaaga agctcaccgg gcgcaaggcg
      481 acggtgacct tgccgggcgg cgacctgacg atcgaatggc gcgcgagcga cgaccacgtg
      541 ctgatgaccg gtccggtcga gctggagcac gaaggcacct tcgcgccggc gctgttcgcg
      601 ggagccgcgt gatggccgtc gaagtggtca cgttcggctg ccgcctcaac acctacgagt
      661 ccgaggcgat gcgcgcccag gccgaggccg ccggccacga gcagctcgtg atcgtcaaca
      721 cctgcgcggt cactgcggaa gcgacgcggc aggcgcggca gacgatccga aagctggcgc
      781 gcgagaaccc ggacgcgaag atcgtggtga ccggctgcgc ggcgcaggtc gagccgcaga
      841 cattcgcggc catgcccgag gtgacgcagg tggtcggcaa ccacgagaag atgcaggctg
      901 ccacgtggcg tcgtctcgac gacgtcgccg atgacgaaaa gatccgcgtc aacgacatca
      961 tggccgtgcg cgagacggcg gttcacctga tcgacggaat gcgcggccgc acgcgcgctt
     1021 tcgtgcaggt gcagaacggc tgcgatcacc gctgcacgtt ctgcatcatc ccgttcgggc
     1081 gcggcaactc gcgctcggtc gcgatggggg tcgtggtcga tcaggtgcgc acgctcgtcg
     1141 agcacggcac gcgcgaggtc gtgctcaccg gcgtcgacat caccagctac ggcaaggacc
     1201 ttcccggcgc gccgaagctc ggggcgctgg tcaagaacat cctccgtcac gtaccggagc
     1261 tggagcggct gcgcatctcg tcgatcgact cggtcgaggc cgacgccgac ctcctcgacg
     1321 cgctggcacg cgaagagcgg ctcatgccgc atctgcacct gtcgctgcag gcgggcgacg
     1381 atctcgtgct gaaacgcatg aagcggcgcc atctgcgcga cgacgcgatc cgcttctgca
     1441 acgacgtccg ccgcctgcga cccgacgtcg tcttcggcgc cgacctgatc gccggcttcc
     1501 cgacggaggg cgaggacatg ttcgcgcgct cgctcgacat cgtcgacgca tgcgggctca
     1561 cgcacctgca cgtcttcccg ttctcgccgc ggcccggcac gtcggcggcg cgcatgccgc
     1621 aggtggcgcg cgacgtcgtc aaggaccgcg cccgccgcct gcgcgacaag ggcgaagccg
     1681 ccttgcgcaa gcatctcgcc agcgagatcg gcgcgcgccg gcgcgtgctg accgagaccg
     1741 acaggctcgg ccgcaccgaa ggttttacgc tcgtgcgctt cgaaacgccg gtccggccgg
     1801 gcgagatcct cgacgtcgcc atcggcggcc acgacgggcg cgagcttctg gcggcgtgag
     1861 ttgagcctcg cctctaaaga atgaacgagt cggccgtgat ggttgccgat ggcacgtgga
     1921 tcac
//
LOCUS       DATAIQ010000843         3004 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_413088, whole genome shotgun sequence.
ACCESSION   DATAIQ010000843 DATAIQ010000000
VERSION     DATAIQ010000843.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3004)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3004)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3004
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_413088"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..388)
                     /locus_tag="VHN20_13845"
     CDS             complement(<1..388)
                     /locus_tag="VHN20_13845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012335535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HEX2726895.1"
                     /translation="MKRAIAAIAFGVTAAVFSSGVSAQATLNNVKQKGFLACGSNPAL
                     AGFGVPDAQGNWTGLDVEFCRAIAAAIFNDPTKVRFIPLTAKDRFTALQSGEVDVLAR
                     NSTATMSRDTQLNLDFPVINYYDGQGF"
     gene            624..1844
                     /gene="metC"
                     /locus_tag="VHN20_13850"
     CDS             624..1844
                     /gene="metC"
                     /locus_tag="VHN20_13850"
                     /EC_number="4.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018263773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004121 - cystathionine beta-lyase
                     activity [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cystathionine beta-lyase"
                     /protein_id="HEX2726896.1"
                     /translation="MAKFSSTDLRRYRKRTRLVHAGRDPWDHHGFINTPVYRGSTVLF
                     RTMDDLRHRRGRYVYGTVGTPTRDSLEEAWTDLTGAAGTVLTPSGLAAVSLALMSCLK
                     SGDHLLVSDSVYRPTRVFCDTVLKRFGVKTTYYDPGLGERIDGLFRPNTAAVFTEAPG
                     SQSFEMQDIPAIAQVAHARGAVVLMDNTWATPLFFPAHERGVDMSIEAGTKYLSGGSD
                     LLLGLVSANQRCWRNLRQTFDALAASPGPEDVFLALRGLRSLELRLKEHERQALAMAR
                     WLDSRPEVDQVLHPALEQDPGHAIWKRDFKGSTGLFSVILKPVSDDALAAMLDGLELF
                     GMGFSWGGFESLVIPFDCASYRTATAWRPDGPALRFYIGLEDVEDLKADLEAGFARLR
                     DVQANPVPPGRELE"
     gene            complement(1868..2656)
                     /locus_tag="VHN20_13855"
     CDS             complement(1868..2656)
                     /locus_tag="VHN20_13855"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020085940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HEX2726897.1"
                     /translation="MLVPLHDLDNPVRHIKRPYVNWALIAANVIIFATLQSGLVIDAR
                     VGDAFVALAGVIPFEVTTSGQIIPDARVVPETLTLLTYMFLHAGWLHLGGNMLFLWIL
                     GDNVEDSMGHGRYFLFYLVCGVAGALGHVLIHPQSADPLIGASGAIAGIVVAYLFLHP
                     GVHLWCLLGRFPIRLRAKYALGGWALMQLGFAVLLTDDGTAWWAHVGGMAAGAALIIV
                     MRRAGVSLFGRAAVGPQAVGSLHAAAPDARRIADAAEDASRKQG"
     gene            complement(2685..>3004)
                     /locus_tag="VHN20_13860"
     CDS             complement(2685..>3004)
                     /locus_tag="VHN20_13860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011926812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase N-terminal
                     domain-containing protein"
                     /protein_id="HEX2726898.1"
                     /translation="DVFVARFDFWLVFGMVAQLVFGARFIVQWIVSERAGKSVMPLAF
                     WFLSVDGGLMTLVYGLVRREPVIIFGQALSTIIYVRNLMLIFRERRQLAQLARDGRAS
                     TPS"
BASE COUNT          517 a         1007 c         1009 g          471 t
ORIGIN      
        1 tgaagccctg gccgtcatag tagttgatca ccgggaaatc gagattgagc tgggtatcgc
       61 gcgacattgt tgccgtcgag ttgcgcgcca gcacatcgac ctcgccggac tgaagggccg
      121 tgaaacggtc cttggcggtc agcgggatga agcgcacctt ggtcgggtcg ttgaagatcg
      181 ccgccgcgat ggcgcggcag aactccacgt cgaggccggt ccagttgccc tgcgcgtccg
      241 gcacgccgaa gccggcgagc gccgggttcg aaccgcaggc caggaaaccc ttctgcttga
      301 cgttgttgag ggtcgcctga gccgagacgc cgctcgaaaa gacggcggcc gtgaccccga
      361 aggcgatcgc agcgatggct cgtttcatgt ctgatgtctc ccactttggg ttttttagcc
      421 ggcggatgag gtccgggatg gttaggcccc gcaaacatca tgccgcaggc cggatttgat
      481 gccgccgcag gcaaggccgc ctgcggcatt gccgccatca catgcgacat ttgccatccg
      541 gtcaaggtgc atggcgccgt ctcccttgac ggcggcgccc ccagacggct gacatcgtta
      601 acggctgctc taagacatat ggcatggcaa aattttcctc caccgacctc cgccgctatc
      661 gcaagcgcac gcgcctggtg catgccgggc gggacccctg ggaccaccac gggttcatca
      721 acaccccggt ctaccgcggc tcgacggtgc tgttccggac catggacgac ctccgccacc
      781 ggcgcggccg ctacgtctac ggcaccgtgg gaacgcccac ccgggactcg ctcgaggagg
      841 cctggacgga cctgaccggg gccgccggga ccgtgctgac gccctccggc ctggcggcgg
      901 tctcgctcgc cctcatgtcc tgcctcaaga gcggcgacca cctgctcgtg tcggactcgg
      961 tctaccggcc gacgcgcgtc ttctgcgaca cggtgctcaa acgcttcggc gtcaagacga
     1021 cgtattacga cccgggcctc ggcgagcgaa tcgatggcct gtttcgcccc aacacggccg
     1081 ccgtcttcac cgaggcgccg gggtcgcaat cgttcgagat gcaggacatt ccggcgatcg
     1141 cgcaggtggc gcatgcgcgc ggcgccgtgg tgctgatgga caatacctgg gcgacgccgc
     1201 tgttctttcc cgcccacgag cgcggcgtcg acatgtccat cgaggccggc accaaatatc
     1261 tgagcggcgg atccgatctc ctgctgggcc tcgtctcggc caaccagcgc tgctggcgca
     1321 atctgcgtca gaccttcgac gcgctcgcgg cgtcgccggg gccggaagac gtatttctcg
     1381 cgctgcgcgg cctgcgcagc ctcgagttgc gcctgaagga gcacgagcgc caggcgctgg
     1441 cgatggcgcg ctggctcgac tcacggccgg aggtcgacca ggttctgcat ccggcgctcg
     1501 aacaggatcc cggccacgcc atctggaaac gcgacttcaa gggctcgaca ggcctgttct
     1561 cggtgatcct caagccggtc tcggatgacg cgctcgcagc catgctcgac ggcctcgagc
     1621 tgttcggcat gggtttctcg tggggcggct tcgaaagtct cgtgatcccg ttcgactgcg
     1681 ccagctaccg cacggcgacc gcgtggcggc cggacggacc ggccctgcgc ttctatatcg
     1741 ggctcgagga tgtcgaggac ctgaaagccg atctcgaggc cggcttcgcg cggctgcgcg
     1801 acgtgcaggc caatcccgtg ccgccgggcc gggagctgga gtaagagcgc cgcgggcgcc
     1861 ttatgctcta tccctgcttc cggctcgcat cttcggcagc atcggcgatg cgccgggcat
     1921 cgggcgcggc agcgtgcagg gagcccaccg cctgcggacc caccgcagcc cggccaaaca
     1981 gggacacgcc cgccctgcgc atcacgatga tcagcgccgc gccggcggcc atgccgccga
     2041 catgcgccca ccacgcagtg ccgtcgtccg tgagcagcac ggcgaagccc agctgcatga
     2101 gcgcccagcc gccgagcgcg tatttcgccc tgaggcggat gggaaagcgg ccgagcaggc
     2161 accacaggtg gacgcccgga tgcaggaaca gataggccac gacgatgccg gcgatcgctc
     2221 ccgaggcgcc gatcagcggg tccgcggact gcgggtggat gaggacatga ccaagcgcgc
     2281 cggcgacgcc gcacaccagg tagaacagga agtagcggcc gtgacccatg gaatcctcga
     2341 cgttgtcgcc gagaatccag aggaacagca tgttgccgcc gagatgcagc cagccggcgt
     2401 gcaggaacat gtaggtgagg agcgtgaggg tctcgggcac gacgcgcgcg tccgggatga
     2461 tctggcccga ggtcgtgacc tcgaatggta tgacgcctgc gagcgccacg aacgcgtcgc
     2521 cgacgcgcgc atcgatcacg agcccgctct gcagcgtggc gaagatgatc acgttcgccg
     2581 cgatcaacgc ccagttcacg tacggccgct tgatgtgccg aaccggatta tcgagatcgt
     2641 gaagcggcac gagcatcgcg gcttgccctg gatcgagcgt gcggtcagct gggcgtgctg
     2701 gcgcgcccgt cgcgcgcgag ctgcgccagc tgccgccttt cgcggaagat cagcatgagg
     2761 ttgcgcacgt agatgatggt cgagagggcc tggccgaaga tgatgacggg ctcgcgtcga
     2821 acgaggccgt agaccagtgt catcaacccg ccgtcgaccg agagaaacca gaaggcgagc
     2881 ggcatcacgc tcttgccggc gcgctcgctg acgatccatt gcacgatgaa gcgcgccccg
     2941 aagacgagct gcgcgaccat gccgaagacg agccagaagt cgaagcgcgc cacgaacacg
     3001 tcgt
//
LOCUS       DATAIQ010000844         3003 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_65779, whole genome shotgun sequence.
ACCESSION   DATAIQ010000844 DATAIQ010000000
VERSION     DATAIQ010000844.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3003)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3003)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3003
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_65779"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            163..1023
                     /locus_tag="VHN20_13865"
     CDS             163..1023
                     /locus_tag="VHN20_13865"
                     /inference="COORDINATES: protein motif:HMM:NF012618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WD40 repeat domain-containing protein"
                     /protein_id="HEX2726899.1"
                     /translation="MIAAGGFKEVRLLDAAGKQVVATLPGHAEVVRAVVFTRDGKRLV
                     AAGGVPGRKGEVKIWDVDQRAPVSAIAGHADTIYGLAVSPDGKMVATSSYDKLIKLWD
                     VDSGKEIRTLKDHIDAVYALAVTADGKRLVSGAADRTVKIWDVATGTRLYTLGDATDG
                     INAVALSPDGKLAAAAGIDKTIRVWALGEKSGRLLHTLIAHEDAILQLAWSPDGRTLV
                     SSSADKSIKVFRAADLSEVRQIAAQPDWTYGLAFSPDGRRFAAGRYDGSLTLYEVGAR
                     EGATVTAESR"
     gene            1032..>3003
                     /locus_tag="VHN20_13870"
     CDS             1032..>3003
                     /locus_tag="VHN20_13870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726900.1"
                     /translation="MKRLLLPLVTMSLTLTNAPAQTEPHPTGPRITPPTLNVVAPRGI
                     SRGTTVEMTVEGLNLARAHAIYFDSPGLKGRIVRVKELPDLPDIRLGSNGTPSTVDLG
                     PLPPRNQVTVEVDVSPQAAIGPVNFRLHTPLGTTAPGTFLVEPYYGESPDREPNDTFE
                     NAFETYLPSILVGEIARAGDVDHFKIQVKAGEELVFENGAMLTGSTLQPVVSILREDH
                     SVAAEFGADGGPSVTAFAHKFDKPGTYYIRVADYQQSGRSGHTYRIKVGGFPLATSVF
                     PLGLQKGTTAEVALRGYRLGSDRIEVKGEPSPGEQDLLRLRPKTKAGLSFSEVKLAIG
                     TDPEVLSTAENTALARAQRVSTPVTVNGRIAASGEAHYFRFAAKRGETTVLEVNARRL
                     DSDLDSAIEVLDAAGKPIEVATVRSVVETFTTLRDHDSAARNMRLQSITGLKVGDWMM
                     IGGEIGRLEALPRTPDDDIILESFAGQRLTFFGTSAETHAVDKGIYKVQILPPGTQLT
                     PNGLPIVRLYARNDDGGPGFGKDSRLEFTAPADGEYIVCIRDVRGMGGENFAYRLSIR
                     PRRPDFRLAVAPRNPNVPLGGSIPLTVTALRLDGFDGKIDVVLEGLPKGLTATPGVIG
                     PGQVSTTVLLSAAVDAKLNEAAPLRVAGKAAGS"
BASE COUNT          545 a          972 c          991 g          495 t
ORIGIN      
        1 aggcgctcga ggacatggct tggtccatgc tgacgagcaa agaattcatg ttcaaccact
       61 gatatgagac acgccaccgg gcttctcatg gttgccgcgg ccgtgctcac agcggctccg
      121 aagcagcaga tcttctcgct cgcttaccgc ccggacggat cgatgatcgc cgccgggggc
      181 ttcaaggaag tgaggctgct cgatgccgct ggtaagcagg tcgtcgcgac gctgcctgga
      241 catgctgaag tagtgcgcgc cgtcgtgttc acccgggacg gcaaacgcct ggttgcggca
      301 ggcggggtac caggacgcaa gggagaggtg aagatctggg atgtcgatca gcgcgctccg
      361 gtctccgcca tcgccggcca cgcggacacc atctacggcc tcgccgtctc gcccgacggc
      421 aagatggtcg cgacctcgag ctacgacaag ctgatcaagc tctgggatgt agattcgggg
      481 aaagagatcc ggaccctgaa agaccatatc gacgccgtgt atgcgctcgc ggtcacggcc
      541 gacggcaagc gcctggtgtc gggcgcggcc gaccggacgg tcaagatctg ggacgtggcg
      601 acgggcaccc gcctctacac tctcggcgat gctacggacg gcatcaacgc tgtcgccctg
      661 tctccggatg gcaaactcgc agccgccgcg ggcatcgaca aaaccatccg ggtgtgggcg
      721 ctgggcgaga agagcggacg cctgctgcac acgctgatcg cgcatgaaga cgcgatcctg
      781 cagcttgcgt ggtcgccgga cggccgcacg ctggtgtcgt catccgccga caaatcgatc
      841 aaggtattcc gagcggcgga tctctccgaa gtccggcaga tcgccgccca acccgactgg
      901 acctacgggc tcgccttttc acccgacggc cggcgcttcg ccgcgggccg ctacgacgga
      961 tcgttgacgc tgtacgaggt cggggcgcgc gaaggcgcca ccgtcaccgc cgaatcgagg
     1021 taactgtcgc gatgaaacgc ctgctgcttc cgctggtcac catgtcgctc acgctgacaa
     1081 atgcgccggc gcagaccgag ccgcatccta ccggtccacg catcacgcct ccgacgctca
     1141 acgtcgtcgc gccgcggggc atatcgcgtg gcaccacggt ggagatgacc gtcgaagggc
     1201 tcaacctggc gcgcgcgcac gccatctatt tcgacagccc cgggctcaag gggcggatcg
     1261 tgcgcgtgaa ggagttgccg gatctgcccg acatccgcct gggatcgaac ggcacgccgt
     1321 cgaccgtgga cctcggaccg ctgccgccgc gcaatcaggt gacggtggag gtggacgtca
     1381 gtccacaggc cgcgatcggt cccgtgaact tccggctgca caccccgctc ggcactactg
     1441 cgccggggac gtttctggtc gagccgtact acggtgagag tcccgaccgg gagccgaacg
     1501 acacgttcga gaatgcgttc gagacgtacc tgccgtcgat attggtcggc gagatcgccc
     1561 gcgcgggtga cgtggatcat ttcaagattc aggtcaaggc cggcgaggag ttggtgttcg
     1621 agaatggcgc gatgctcacc gggtcgacgc tgcagccggt agtgagtatc ctgcgtgagg
     1681 atcactcagt ggccgccgag ttcggcgccg acggcggccc gagcgtcacc gcgttcgcgc
     1741 ataagttcga caagccgggg acatattaca tccgagtcgc ggattatcag cagagcggcc
     1801 gcagtggcca cacgtaccgg atcaaggtag gcggctttcc gctggcgact tcggtcttcc
     1861 cgctcggctt gcagaaaggg accaccgctg aggtggcgct gcgcggctac cggctagggt
     1921 ccgacaggat cgaagtgaag ggcgaaccgt cgccgggcga gcaggacctg ctgcgtctgc
     1981 gtccgaagac caaggcgggg ctctccttct ccgaagtaaa actcgccatc gggaccgacc
     2041 ccgaggtgct gtccacagca gaaaacacgg cgctcgcgcg ggcgcaacgc gtgagtactc
     2101 cggtgactgt gaacggccgt atcgccgcct ctggcgaagc gcactatttc cgcttcgccg
     2161 caaaaagggg ggagaccacg gtgctcgagg taaatgctcg ccgtctcgat tccgatctcg
     2221 attccgccat cgaggtgctc gatgccgccg gcaagcccat cgaagttgcc accgtgcggt
     2281 cggtagtcga gaccttcact accttgcgcg accacgattc ggcggcgcgg aacatgcggc
     2341 tccagtcgat caccggcttg aaggtgggcg actggatgat gatcggggga gagatcggac
     2401 gtctcgaagc gttgccccgc acgcctgacg acgacattat cctcgagtcc ttcgccggcc
     2461 agcggctgac gttcttcggc accagcgctg agacgcacgc cgtcgacaaa ggaatctata
     2521 aggtccagat actgccgccg ggcacccagt tgacgcccaa cgggctgccc attgtgcgcc
     2581 tatatgcccg caatgacgac ggcggtcccg gtttcggcaa ggattcccgc ctcgagttca
     2641 ctgcgcccgc cgacggcgag tacatcgtgt gcatccgtga cgtgcgcggg atgggcggcg
     2701 agaacttcgc ctaccgcctg agcatccgcc cgcgacggcc cgatttccgg ctcgcggttg
     2761 caccccgcaa cccgaacgtg cctctcgggg ggagcatccc gctcacagtc acagcgctgc
     2821 ggctcgacgg attcgatgga aagatcgacg tagtactcga aggactcccc aagggtctca
     2881 ccgctacgcc gggcgtgatc ggccccggtc aggtgtcgac cacggtgctg ctgtccgcgg
     2941 cggtggacgc gaagctgaac gaggccgcgc ctttacgcgt ggcggggaaa gcggcgggca
     3001 gca
//
LOCUS       DATAIQ010000845         3472 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_158675, whole genome shotgun sequence.
ACCESSION   DATAIQ010000845 DATAIQ010000000
VERSION     DATAIQ010000845.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3472)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3472)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3472
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_158675"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..694)
                     /locus_tag="VHN20_13875"
     CDS             complement(<1..694)
                     /locus_tag="VHN20_13875"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HEX2726901.1"
                     /translation="MTAASVVYESDEKVGIVTLNRPDKLNALTMDMRLELQKVLRSAD
                     DDPGTSVIVLRAEGRAFCVGFDIGGGGSDPARAASRHDALRYHQRLGISLQALMTPWT
                     LRKPVIASVQGYALGGGCELAMFCDLTIAAEDAQFGEPEIRLSQAGPAILMPWIIGHK
                     RARELLYFGERIDAKEALALGMINRIAPAGDLRDATLAYARRLAQVGPEPLAAMKLAI
                     NRGMDAAGFRNAI"
     gene            complement(802..1854)
                     /locus_tag="VHN20_13880"
     CDS             complement(802..1854)
                     /locus_tag="VHN20_13880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726902.1"
                     /translation="MLTCREHVHEHKRARLRLRGILAALAASIVLSVFPASAQDFYKG
                     KTLSIVVGYAVGGGYDQYARLLARHMERYVPGNPSIVVVNMPGAATLTALRHMDTNAA
                     KDGTVIVLFDFFQIGNSLLAPEKVNTDFRKYQWIGSISEDLSVCYIWHTIAANSVEDL
                     RKGQQIHMGLTAAGTMNEVRQKILKNMLGLNIRTVSGYKGSAEEKLAMERGELEGGCG
                     GWSSVPPDWRRDGKVKTIVKLVPARAPDMPANVPYVADLVSSSRDRQIIELLTQPAQL
                     GKPIVASAAVPRDRIEVLQKAFDQAVKDPQFIAEAEKMQLEVSPRSAAEAMKVLDDIY
                     ALPADIVQEAKRVISN"
     gene            1981..3054
                     /locus_tag="VHN20_13885"
     CDS             1981..3054
                     /locus_tag="VHN20_13885"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF014698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEX2726903.1"
                     /translation="MGEFRSFRTAVRVPAEAMRPVVDPAGWTAADLQDVGSWSYGITE
                     RDADELVEAVDAARRAGVAVVDVRPDNFPLRDFAGTLHDIRRELIDGRGIVMMHNFPI
                     DRLDREGVATAYLGLGAYLGEPMSQNKEGHILGHVKDLGGDYNDQNTRGYMTSAEMRF
                     HADGCDYVGLLCLNTSKNGGESRVASSVTIYNRILERRPDLAEVLTQDFYRSRSGEVS
                     PGQEPYFKQPIFSVTDGYFSATGAGAVIDKAQKLPGVPQFTALQKEAIEVYREVAEEC
                     AVDIGFRAGDIQFLNNFVTLHTRRAYEDWPEASRKRHLLRLWLSDPEARPVPREQREG
                     RAGRGVRIEGVPLTAPLDVQAAA"
     gene            complement(3170..3343)
                     /locus_tag="VHN20_13890"
     CDS             complement(3170..3343)
                     /locus_tag="VHN20_13890"
                     /inference="COORDINATES: protein motif:HMM:NF037848.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016989 - sigma factor antagonist activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NepR family anti-sigma factor"
                     /protein_id="HEX2726904.1"
                     /translation="MKVIKSEAFLPRINAVPTIVTAAAVGRVLQRLYADTLDEPLPDD
                     ITVLLRQLDGPRC"
BASE COUNT          581 a         1118 c         1137 g          636 t
ORIGIN      
        1 ggatggcgtt gcggaaaccg gcggcgtcca tgccgcggtt gatcgcgagc ttcatggccg
       61 ccagcggttc ggggccgacc tgggcaaggc gccttgcata tgcgagcgtc gcgtcgcgca
      121 ggtcgccggc gggcgcgatg cggttgatca tgccgagggc gagcgcctcc ttggcgtcga
      181 tgcgctcgcc gaagtagagc agctcgcggg cgcgcttgtg gccgatgatc cagggcatca
      241 ggatcgccgg ccctgcctgg gacagtcgaa tctcgggctc gccgaactgc gcgtcctccg
      301 ccgcgatggt gaggtcgcag aacatggcga gctcgcagcc gccgccgagg gcatatccct
      361 gcaccgaggc gatgaccggc ttgcgcaggg tccacggcgt catcagcgct tgcaggctga
      421 tgccgaggcg ctggtgatat ctgagtgcgt cgtgccgcga ggcggcgcgc gccgggtcgg
      481 agccgccgcc acctatgtca aagccgacgc agaaggcgcg gccctccgcc cgcagcacga
      541 tcacgctcgt ccccgggtcg tcgtccgcgc tcctcagcac cttctgcagc tcgaggcgca
      601 tatccatcgt cagggcgttg agcttgtcgg gacggttcag ggtgacgatg ccgaccttct
      661 catcgctctc gtaaacgacg ctcgccgccg tcatgccgga tgtccttcct tgcgtgttga
      721 tgaatcaaag cgtttgacgc cggcgaagcg gtggcggacg cggcggtcgc atcgtcgccg
      781 cgcgctgcac ctcagttgcg cttagttgct gatcacccgc ttcgcctcct gcacgatatc
      841 ggctggcagc gcgtagatat cgtcgagaac tttcatcgcc tcggcagcgc ttctcgggct
      901 gacctcgagt tgcatcttct cggcttcggc gatgaactgc gggtccttca cggcctgatc
      961 gaacgccttt tgcagaacct cgatgcgatc acgggggacg gcggccgagg cgacgattgg
     1021 cttgccgagt tgcgcaggct gcgtcagcag ctcgatgatc tgcctgtccc ggctgctcga
     1081 caccaggtcg gccacgtagg gcacgtttgc aggcatgtcc ggtgcccggg cggggaccag
     1141 cttgacgatc gtcttgacct tgccgtcgcg ccgccagtcg ggcggaacgc tgctccagcc
     1201 gccgcagccg ccttcgagct cgccgcgctc catggcgagc ttttcctccg cgctgccctt
     1261 gtagcccgag accgtgcgga tgttgaggcc gagcatgttc tttaggattt tctgacgcac
     1321 ttcgttcatg gtcccggctg ccgtcaggcc catgtggatc tgctgcccct tgcgcagatc
     1381 ctcgaccgag ttcgccgcga tcgtgtgcca gatgtagcag acgctcaggt cctcgctgat
     1441 gctgccgatc cactggtatt tgcggaagtc agtgttcacc ttttcggggg cgagcagcga
     1501 gttgccgatc tggaagaagt cgaacagcac gatcaccgtg ccgtctttgg cggcgttggt
     1561 atccatgtgg cgcagcgccg tcagcgtcgc ggcgcccggc atgttcacta ccacgatgct
     1621 cggattgccg ggaacgtaac gctccatatg ccgagccagc aggcgcgcat actggtcgta
     1681 accgccgccg accgcgtagc cgacgacgat gctgagcgtc ttgcccttgt agaagtcttg
     1741 cgcggacgcc gggaacacgc tcaacacgat gctcgccgcc agagccgcga gaatgccgcg
     1801 caaccgcagc cgcgcgcgct tgtgctcgtg gacgtgctca cgacaggtca gcatcggcaa
     1861 tcctcccaaa tcggcctctt cagaagctcc agttgggtcg atgctagcga gcagcgtctt
     1921 gcggggccat accttttttg gcagctttac ccaaaatcgg aacgatgggg aggatcggtg
     1981 atgggcgagt ttcgtagctt caggacggcg gtcagggtcc ctgcggaagc gatgcggccc
     2041 gtcgtcgacc cggcagggtg gacggcggcc gatctccagg acgtgggttc gtggagctac
     2101 ggaatcacgg agcgggatgc ggatgagctg gtcgaggcgg tggatgccgc gcgccgcgcc
     2161 ggcgttgccg tcgtcgacgt gcgccctgac aacttcccgc tgcgcgactt cgccggaacg
     2221 ctgcatgaca tccgccgcga gctgatcgac ggccgcggca ttgtcatgat gcacaatttc
     2281 ccgatcgatc gcctggatcg cgaaggcgtc gccaccgcct atctcggcct tggcgcctat
     2341 ctcggcgagc ccatgtcgca aaacaaggaa gggcacatcc tcggccacgt caaagacctg
     2401 ggcggcgatt acaacgacca gaacacgcgc ggctacatga ccagcgccga gatgcgcttt
     2461 catgcggacg gctgcgacta cgttggtctt ttgtgcctca acacctccaa gaacgggggc
     2521 gagagccgcg ttgcgagctc ggtcacgatc tacaaccgga tccttgaacg gcgccccgat
     2581 ctcgccgagg tcctcacgca ggatttctac cgctcgcgca gcggcgaggt cagcccaggc
     2641 caggagccgt atttcaagca gccgatcttt tccgtcacgg acggttattt cagcgccacg
     2701 ggcgccggcg ctgtcatcga caaggcgcag aagcttcccg gcgtgccgca gttcacggcc
     2761 cttcagaagg aagccataga ggtctaccgc gaggtggccg aggaatgcgc cgtcgacatc
     2821 ggattccggg caggggacat ccagttcctg aacaatttcg tcacgctgca cacgcggcgc
     2881 gcttacgagg attggccgga ggcatcgcgc aagcggcacc tgctgcggct gtggctcagc
     2941 gatcccgagg cgcgcccggt cccgagggag cagcgcgagg ggcgcgcggg gcgcggcgtg
     3001 cggatcgagg gcgtgccgct caccgcgccg ctcgacgtgc aggccgccgc atagaacgga
     3061 tgtgaggaac agagcgctat gagctcaatc tgaattgatt gcgctcgcct tatacctctg
     3121 ggtcgcatgg attctccggc aagccggctc ccactggccg gagcacgatc tagcagcgcg
     3181 gcccatcaag ttgcctgagc agaacggtga tgtcgtcagg cagcggctca tccagcgtgt
     3241 cagcatacag gcgctgaagc acacgcccga ccgcagccgc cgtaacaatg gtcggaacgg
     3301 cgttgattcg cgggagaaaa gcttccgact tgatgacttt catcgcaaat gacctccggc
     3361 gaccacgctt cctgccattc gcgcggtcgg caacctgtca cgaagataaa gcgccagcgg
     3421 ccggacggtt tcagcttgac ggtacgttcc ccacagcgat ctccgaagct gg
//
LOCUS       DATAIQ010000846         2820 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_342321, whole genome shotgun sequence.
ACCESSION   DATAIQ010000846 DATAIQ010000000
VERSION     DATAIQ010000846.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2820)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2820)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2820
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_342321"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..305
                     /locus_tag="VHN20_13895"
     CDS             <1..305
                     /locus_tag="VHN20_13895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018408208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF559 domain-containing protein"
                     /protein_id="HEX2726905.1"
                     /translation="ARLVVEVDGATHSTDAEVERDRRRDVWLAAVGYETLRIHNDEIY
                     HNRDGILETIRLRLAERRRASDTSPSQPSPSSKSGVPDLRNSHAYLGRAPRYVGEG"
     gene            complement(310..684)
                     /locus_tag="VHN20_13900"
     CDS             complement(310..684)
                     /locus_tag="VHN20_13900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006019430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome C oxidase subunit IV family protein"
                     /protein_id="HEX2726906.1"
                     /translation="MAHATIAHAETAGHAPAATQEHGQQHPIKLYLVVWSWLFVLSTF
                     SYLVDYFHLQGLLRWTLILLFMMLKAGLIVAVFMHMAWERLALIYAILLPPLLVLVFV
                     GIMVFESNYTLLMRVLHFALGS"
     gene            complement(693..1418)
                     /locus_tag="VHN20_13905"
     CDS             complement(693..1418)
                     /locus_tag="VHN20_13905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006019429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-copper oxidase subunit III family protein"
                     /protein_id="HEX2726907.1"
                     /translation="MAETALRSTSGFAARGRAQWDALATDWSSDQRAFKKVSWGKAMM
                     WIFLLSDTFIFSCFLLSYMTVRMSTTVPWPNPSQVFALHIGGQDIPLILIAIMTFVLI
                     TSSGTMAMAVNFGYRRDRRKTAILMLVTAALGATFVGMQAFEWTKLIMEGVRPWGNPW
                     GAPQFGSTFFMITGFHGTHVSIGVIFLIVVAIKVWRGDFDTGRKGFFTSRTGQYEHVE
                     TMGLYWHFVDLVWVFIFAFFYLW"
     gene            complement(1453..2118)
                     /locus_tag="VHN20_13910"
     CDS             complement(1453..2118)
                     /locus_tag="VHN20_13910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018645524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit 3"
                     /protein_id="HEX2726908.1"
                     /translation="MGATILFFSGLAVVAVWWLSKHRIASKPWLEPGAAGELPGTGVS
                     AIPMAKVGLGVLLASLGALFGLFISAYVMRMGFADWRPVPKPTLLWINTGMLMLSSAA
                     LQWARGAADRKDPASVRTGVLAAAGAALAFVAGQLLAWQQLSGSGYFVASNPASSFFY
                     LITGLHGLHLLGGLVALGLVTARAWRGGEPGKLPLSLDLCSMYWDFLLLIWLVLFGLL
                     LLT"
     gene            complement(2133..>2820)
                     /locus_tag="VHN20_13915"
     CDS             complement(2133..>2820)
                     /locus_tag="VHN20_13915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016557192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /protein_id="HEX2726909.1"
                     /translation="YNWTLTLWRGDIHLTVPMLFAIAFIVTFVNGGLTGLFLGNAVVD
                     VPLSDTMFVVAHFHMVMGVAPILVVFGAIYHWYPKITGRMFNEALGQFHFWVTFLGAY
                     LIFLPMHYLGIVGVPRRYHDLAGTSFIPDSAHDLNMFISVIALIVGFAQMVFLFNLFW
                     SVRHGREAGGNPWRATTLEWQTPETPPGHGNWGKEVPVVYRWAYDYSVPGAAQDYIPQ
                     NQPHTAPRPA"
BASE COUNT          562 a          916 c          928 g          414 t
ORIGIN      
        1 gcgcgcggct cgtggtcgag gtggatggcg cgacgcattc gaccgatgca gaggtagaac
       61 gggatcgcag acgagacgtt tggcttgccg cggtcggata cgaaacgctg cgcatccaca
      121 atgacgagat ttaccacaat cgcgacggca tcctcgagac gatccgcttg cgcctcgccg
      181 aacggcggcg cgcctcggac acttccccct cccaaccctc cccctcaagc aagtcgggtg
      241 ttcccgactt gcgcaattct catgcgtatc tcgggcgagc cccgagatac gtgggagagg
      301 gctaaggcgt cacgacccca gggcgaagtg gaggacgcgc atcagcagcg tgtagttgga
      361 ttcgaacacc atgatgccga cgaacacgag caccaggagc ggcggcagca ggatggcgta
      421 gatcagcgcc agccgttccc aggccatgtg catgaacacg gcgacgatca ggcccgcctt
      481 gagcatcatg aacaggagga tcagggtcca cctgagcagg ccctgcaggt ggaagtagtc
      541 gacgagatac gaaaaggtgc tgaggacgaa aagccagctc cagaccacga gatacagctt
      601 gatcgggtgc tgctgaccgt gttcctgcgt cgccgccggc gcgtgcccgg cggtctcggc
      661 gtgtgcgatc gttgcgtgcg ccatcggtca cctcaccaca gatagaagaa cgcgaagatg
      721 aagacccaga cgaggtcgac gaagtgccag tagaggccca tcgtctcgac atgctcgtac
      781 tgccccgtcc ggctcgtgaa gaagcccttc cggccggtgt cgaaatcgcc ccgccagact
      841 tttatagcga cgacgatcag gaagatcacg ccgatgctca catgcgtgcc gtggaagccg
      901 gtgatcatga agaaggtcga gccgaattgc ggcgcgcccc acgggttccc ccacggtcgc
      961 acgccctcca tgatcagctt cgtccactcg aaggcctgca tgccgacgaa ggtggcgccg
     1021 agcgccgccg tcacgagcat caggatggcg gtcttcctgc ggtcgcggcg gtagccgaaa
     1081 ttgaccgcca tcgccatggt gccgctcgag gtgatcagca cgaaggtcat gatggcgatc
     1141 aggatcaggg gaatgtcctg gccgccgata tgcagggcga agacctggct cgggttgggc
     1201 catggcacgg tggtcgacat gcgcacggtc atgtacgaca agaggaagca gctgaagatg
     1261 aaggtgtcgc tgaggaggaa gatccacatc atggccttcc cccacgacac cttcttgaag
     1321 gcgcgctgat ccgaggacca gtcggtcgcc agcgcatccc actgggcccg gccgcgcgcg
     1381 gcgaagcccg acgtgctcct cagcgcagtt tccgccatca gtcgctccct cccaacattg
     1441 ccggcgctcg cgtcacgtga gcagcagcag cccgaacaag acgagccaga tcaaaagcag
     1501 gaagtcccaa tacatgctgc agagatcgag gctcagcggc agcttgccgg gctccccgcc
     1561 gcgccacgcg cgcgcggtga ccaggccgag cgcgacgagg ccgccgagca ggtgcagccc
     1621 gtgcaggccg gtgatcaggt agaagaacga gctcgccgga ttcgacgcca cgaagtaacc
     1681 ggatccggac agctgctgcc acgccagcag ctgcccggcc acgaaggcga gggccgcgcc
     1741 cgctgccgcc agcacgccgg tgcgcacgct ggcgggatct ttgcggtcgg cggcgccgcg
     1801 cgcccattgc agcgcggcgc tgctcagcat cagcatgccc gtgttgatcc acagaagcgt
     1861 cggcttgggc accggccgcc agtcggcgaa gcccatacgc atcacgtagg cgctgatgaa
     1921 cagcccgaac agcgctccca gggaggcgag cagcacgccg agcccgacct tggccatggg
     1981 tatcgccgac acgccggtgc ccggcagctc gccggccgcg cccggctcga gccacggctt
     2041 cgacgcgatc ctgtgcttcg agagccacca gaccgcgacc acggccaggc cggagaagaa
     2101 caggatcgtc gcgcccatgg cggcccagtc cttcaggccg gccgcggcgc cgtgtgcggc
     2161 tggttctggg ggatgtaatc ctgcgccgcg cccggaacgc tgtagtcgta ggcccaccgg
     2221 tagaccaccg gcacttcctt gccccagttg ccatgccccg gcggcgtttc cggcgtctgc
     2281 cattcgagcg tggttgcgcg ccacgggttg ccgccggcct cccggccgtg ccgcacgctc
     2341 cagaacaggt tgaacaggaa caccatctgg gcgaagccga cgatcagcgc gatgacgctg
     2401 atgaacatgt tgaggtcatg cgccgagtct gggatgaagc tggtccccgc cagatcgtgg
     2461 tagcggcgcg gcacgcccac gatgccgaga tagtgcatcg gcaggaagat caggtaggcg
     2521 ccgaggaacg tgacccagaa gtggaactgg cccagcgcct cgttgaacat gcgcccggtg
     2581 atcttcggat accaatggta gatggcgccg aagacgacca ggatcggcgc gacgcccatc
     2641 accatgtgga aatgcgcgac cacgaacatc gtgtccgaca gcggcacgtc gacgaccgcg
     2701 ttgccgagga acaggccggt gagccccccg ttcacgaagg tgacgatgaa ggcgatcgcg
     2761 aacagcatgg gcacggtcag atggatgtcg ccgcgccaca aggtgagcgt ccagttgtag
//
LOCUS       DATAIQ010000847         1723 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_43815, whole genome shotgun sequence.
ACCESSION   DATAIQ010000847 DATAIQ010000000
VERSION     DATAIQ010000847.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1723)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1723)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1723
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_43815"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(143..445)
                     /locus_tag="VHN20_13920"
     CDS             complement(143..445)
                     /locus_tag="VHN20_13920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylphosphatase"
                     /protein_id="HEX2726910.1"
                     /translation="MTARRFIHATIRGNVQGVGFRAFVERQALERGLDGWVRNRRDGA
                     VEAVFAGPANAVEAMIEICRHGPAGSHVTDVDLREEEAAGLIPSSRPAGFYVLPTV"
     gene            complement(641..1153)
                     /locus_tag="VHN20_13925"
     CDS             complement(641..1153)
                     /locus_tag="VHN20_13925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009492263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamylcyclotransferase family protein"
                     /protein_id="HEX2726911.1"
                     /translation="MPVYFAYGSNMDTSAMAARCPASRQLGPARLAGRRFVISREGYA
                     SVVRDPRHTVWGLLWDIAFADMPALDRYESVASGLYVKLNQPVLAAYGSRRALIYVAR
                     SGGTGQPRPGYLEGVVAAARAAALPEAYIREIEAWSPQIAATRQAPAGAAEPRPVRPL
                     WSSPRARDQG"
     gene            complement(1196..>1723)
                     /locus_tag="VHN20_13930"
     CDS             complement(1196..>1723)
                     /locus_tag="VHN20_13930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003599287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HEX2726912.1"
                     /translation="ELRFERKRVVMLGRDRHEVAIEDAPGGITAVVFGDGTAWPVASS
                     WRPGAPVWFGSVKGEPIAVQVRAILNGVMLAHAGASVEARVYTRREAELAARMPEKNS
                     SAAGKQLLCPMPGLVKAILVKPGQEVKTGEALCIVEAMKMENVLRAERDATVATIAAR
                     EGDSLGVDALILEFA"
BASE COUNT          282 a          618 c          578 g          245 t
ORIGIN      
        1 acttcgatcg cgacgtgata gccgagccac gacaacagaa agaacgcgag tgcaaaggaa
       61 tcgagccacg agaatcccgg cacagcgcct ctccttcgaa tcgttatctc cggccgatcg
      121 gacctgacgg ccggcgcggg aatcagaccg tcggcagcac gtagaagccg gccggccgtg
      181 acgacgggat caagccggcc gcctcctcct cgcgcaggtc cacgtcggtc acatgcgagc
      241 ctgccggccc gtggcggcag atctcgatca tggcctcgac ggcgttggcc ggacctgcga
      301 acaccgcctc cactgcgccg tcgcgccggt tgcgcaccca gccgtcgagc cctcgctcga
      361 gcgcctgacg ctcgacgaag gcgcgaaagc cgaccccctg cacgtttccg cggatggtgg
      421 cgtggatgaa gcgtcgcgcg gtcatcggca aagcccggca ggaagcatcg gcgcacaatg
      481 gccgcgtgac gcggcgcggg tcaacgccgg ctggcggggc gggtccgtgc gacacaccga
      541 aaaagcgccc ctgtaactgg atcatccgga tctcgccgaa cgtcctgtga acccacgcaa
      601 tcacgcatca cgttggaagc aggctttcgc cgcatccggc tcaaccctgg tcgcgggcgc
      661 gtggactcga ccaaagtggc cgcaccgggc gcggctcggc cgccccggca ggcgcctggc
      721 gtgtcgccgc gatctgcggt gaccacgcct cgatctcgcg gatgtaagcc tcgggaagcg
      781 cggccgcacg cgccgcggcg acgacgcctt ccagatagcc cggacggggc tggcccgtac
      841 cgccgctgcg cgccacgtag atcagggcgc gccgagagcc atacgcggcg agcaccggct
      901 gattgagctt gacgtaaagg ccgctggcga cgctctcgta tctgtcgagc gccggcatgt
      961 cggcgaaggc gatgtcccag aggagccccc acaccgtgtg ccgcggatcg cgcaccaccg
     1021 aagcgtagcc ttcgcgcgag atcacgaaac ggcggcccgc gaggcgagcc ggcccgagct
     1081 gacgcgacgc cgggcagcgc gccgccatgg cggacgtatc catgttcgag ccgtaggcga
     1141 aatagacggg cattgtcggt ctatgtatct cctcgacccg ctcgcgggga gaggtttacg
     1201 cgaactcgag aatgagggcg tcgacgccga ggctgtcgcc ttccctggcg gcgatcgtgg
     1261 cgacggtggc gtcgcgctcg gcgcgcagca cgttctccat cttcatcgcc tcgacgatgc
     1321 agagcgcctc gccggtcttc acctcctgtc ccggcttgac caggatggcc ttgaccaggc
     1381 ccggcatcgg acagagcagc tgcttgccgg cggcgctgct gttcttctcc ggcatgcgtg
     1441 cggcgagctc cgcctcgcgc cgcgtgtaca cccgcgcctc gacggacgcg ccggcatggg
     1501 cgagcatgac gccgttgagg atcgcgcgca cctgcacggc gatgggctcg cctttgacgc
     1561 tgccgaacca cacgggcgcg ccggggcgcc atgacgacgc caccggccag gccgttccgt
     1621 cgccgaacac gacggcggtg atgcctccgg gcgcgtcctc gatcgcgacc tcgtgccgat
     1681 cgcggcccag catcaccacc cgtttacgct cgaagcgcag ctc
//
LOCUS       DATAIQ010000848         3307 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_321057, whole genome shotgun sequence.
ACCESSION   DATAIQ010000848 DATAIQ010000000
VERSION     DATAIQ010000848.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3307)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3307)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3307
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_321057"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(616..1389)
                     /locus_tag="VHN20_13935"
     CDS             complement(616..1389)
                     /locus_tag="VHN20_13935"
                     /inference="COORDINATES: protein motif:HMM:NF013625.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding domain-containing protein"
                     /protein_id="HEX2726913.1"
                     /translation="MTALAQSPTMPAAQPSLRGYSEARRAFDSLPVQDRMRLEMLLVA
                     AGYLRPAANERFSAPLLQAIQDFQRDNGLAPDGVLSGTAVARLQAEAGPFLTSWDMQQ
                     RFHIFTMQELWVPVGLLQIAQPISTGMRYTDPFGRARMEHSFIEDGALAASYRRSLET
                     ARAERGTVTFRIIRPDFYTVAWTSADGGGTYMRYHRSGTGLYGFSLFWNRTARTLEPD
                     RIATLVSMSLTWALRGRALIDPATILRPAPAIVVSAPTP"
     gene            complement(1596..2345)
                     /locus_tag="VHN20_13940"
     CDS             complement(1596..2345)
                     /locus_tag="VHN20_13940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1194 domain-containing protein"
                     /protein_id="HEX2726914.1"
                     /translation="MTAVTGSPARATEVDLALVIAVDISYSMEPDEQELQRDGFAEAF
                     RSPLVHDAIRKGVLGRIAVTYLEWASESDQRVVLPWTVIDNLESVMSFADQIAAIPLR
                     RSQRTSISGAIDAAARLFDNYGLEATRRVIDISGDGANNQGRPVAAARDAAVARGLII
                     NGLPIMLKQPGFLDVPELDIYYRDCVIGGPGAFMIPARDRAQFQDAIKNKILLEVAGG
                     FVPPLIRHAQDQRKQADCLTGEMQWRERMGN"
     gene            3020..>3307
                     /locus_tag="VHN20_13945"
     CDS             3020..>3307
                     /locus_tag="VHN20_13945"
                     /inference="COORDINATES: protein motif:HMM:NF013959.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VCBS repeat-containing protein"
                     /protein_id="HEX2726915.1"
                     /translation="MPVTLTTPINTATAPRPFEMAAGDLNGDGRTDLVTITLGNSSNG
                     HNEQATVLLGDGQGGFQTSQTFGVGSGPITTGSGQFQTTYAGWHATGIALAD"
BASE COUNT          592 a         1068 c         1086 g          561 t
ORIGIN      
        1 tgggacggga acgcctccga aaagacgtcg ccaaccttat aggcccaccc accgtcatgc
       61 tcgacgatct gatacgtgat cttggtcatc catccgtcct ccgcgccgac tgcacacctc
      121 gatccttcaa cgaatgaggt cggcttccgg tgcctcctgt gcgcgaagtc cagtcgcggg
      181 gtccatgccg cgcaggaatt gcgaaggaac acgatcaggt cgggaacagg cgcggtcgca
      241 cccgaccaca aaaactatcc gtgccagggc gggctcttgc gggtttcgca ctcctgctgg
      301 agtcgtccgt tcaggccgac gagccagtcc aatgcttgcc tgatcccggc ctcgtgttcc
      361 gagacgagcc tgtgtgggct ggaaattgcg gcgtcggcgc gatccagcat ttgcctgccg
      421 taatccggat gttctggcgg tcgccggacc tcgtccatga cggctcctgg ggcgctgcag
      481 gcgggagcgc acctggctcc cagtcaccga gcgcccgccg actcgcttgc tggtgacgaa
      541 tgacaacctc ccggcggatc gtttcgttcc ggaaagaccc ggagacagcg ctgggcacgg
      601 cgcgaccgca gtcactcacg gggtaggcgc gctcacgacg attgcgggcg cgggccgcag
      661 gatcgtcgca gggtcgatga gcgcacgacc gcgaagcgcc cacgtcaggg acatggacac
      721 gagcgtcgca atgcgatcgg gttcgagggt gcgcgccgtc ctgttccaga acagcgagaa
      781 cccgtagagg ccggtcccgg agcgatgata ccgcatgtag gtgccgcctc cgtccgcgga
      841 agtccacgcc accgtgtaga agtccggcct gatgatcctg aacgttaccg tcccgcgctc
      901 tgcccgagcc gtttccaatg atcgccgata ggacgccgcc agggcgccat cctcgatgaa
      961 cgaatgctcc atgcgggcgc gaccaaaagg gtccgtgtag cgcattcccg tgctgatcgg
     1021 ctgcgcgatc tgcaacagcc ccacgggaac ccagagctct tgcatcgtga agatatggaa
     1081 ccgctgctgc atgtcccagc tggtgaggaa gggtccggct tccgcctgca gccgcgccac
     1141 ggcggtccca gagaggacgc cgtcaggagc gagcccgttg tcccgttgga agtcctggat
     1201 cgcttggaga aggggggcgc tgaaacgctc gttcgccgcg ggccgcaggt agccggcagc
     1261 gaccagcaac atttcgagcc gcatgcggtc ttggacaggc agggagtcga acgcccgcct
     1321 tgcctcggaa tagccgcgga gcgatggctg cgcggcgggc attgtcgggc tttgcgccaa
     1381 cgccgtcatg acgggccggt tcgcgacgac cggggcagcc gtcatgccga tcagcgcgat
     1441 gagctcccgc cgtctcattg gaccatctta ctccaacagg cccgttgatc ccagcctggc
     1501 gccgaagctg catccattcc accaccggca atgatttgcg acccggagca aaaatcgcgt
     1561 cggcgcacgc gacacgatgc gtcctggcgg ccagttcaat tgcccatgcg ctcacgccac
     1621 tgcatctcgc cggtcaggca gtcggcctgc tttctctggt cctgggcatg gcggatcagc
     1681 gggggcacga acccgccggc gacctcgagc aggatcttgt tcttgatggc gtcctggaat
     1741 tgggccctgt cgcgggccgg gatcatgaag gcgccgggcc cgccgatgac gcagtcgcga
     1801 tagtagatgt cgagctccgg gacatcgaga aagccgggct gcttgagcat gatcggcagg
     1861 ccgttgatga tgaggcccct cgcgaccgcc gcgtcgcgcg cggcggcgac cgggcggccc
     1921 tggttgttgg cgccgtcgcc ggagatgtcg atgacgcggc gcgtcgcctc gaggccgtag
     1981 ttgtcgaaca gcctggcggc ggcgtcgatc gcgccggaga tcgacgtgcg ctggctccgg
     2041 cggagcggaa tggcggcgat ctgatcggcg aacgacatga ctgattccag gttgtcgatc
     2101 acggtccagg gcagcacgac gcgctggtcg gattcgctcg cccattcgag ataggtcacg
     2161 gcgatgcgcc cgagcacgcc cttgcggatc gcatcgtgca ccaggggcga tcggaacgcc
     2221 tcggcgaagc cgtcccgttg cagctcctgc tcgtcgggtt ccatcgagta ggagatgtcg
     2281 acggcgatca ccagcgcaag gtcgacctcc gtggcccgtg ccggcgagcc ggtcacggcc
     2341 gtcaccagag ccaatcctag aagagcggaa cgcaaccacg ccatggtcga cctccaagct
     2401 gcgccccaga ggaaagttgg acaggatgtt gcgtcgcgcc tgcgccgccc ttgtcacgcg
     2461 ttggcgacgt aacgcgacaa agcgaacaag ggttcggttc gaagtttcca cgtgcgatcg
     2521 agccggcggg cttgttggca ggctctcggc gcgccctcac gcaacgtctt gaagaggcga
     2581 agatcaatac agggcgagcc gcactccggc gcgtttcatg cgcagcttgc taagtaacct
     2641 tggcctttat ttcgctcccg gttgccagct taaccatgac tagtgttaag ctagactgta
     2701 gtgctatttt cgcggggtgg tcggcaattt ctattgccaa cgcacgcggt gcatgattag
     2761 tgaattatta accgacagcg ctccccgccg cctcgccgcg gcaacaacaa aagcgaacaa
     2821 cccggcgaac accgtggatg aagcgggccc ggctcacgac cgagccggcc aggggtgctg
     2881 gatttccatg acacgtgcag gtgtgcgcgg caggggtcgt acgacctcgg gccgagcggg
     2941 tcggctttaa ccaacgcagc gggctgccga tggcacgcgg gatggcccct cgcgcgccgc
     3001 ggcggatggg ggatttacga tgcctgtcac tctgaccacg ccgatcaaca ccgccacggc
     3061 accacgtccc ttcgagatgg cggcaggcga tctcaacggg gacggccgca ccgatcttgt
     3121 gacgatcacg ctcggcaaca gctccaacgg gcacaacgag caagcgaccg ttcttcttgg
     3181 agatggccaa gggggctttc aaacaagcca gaccttcggg gtcggcagcg ggccgatcac
     3241 caccggttcg ggtcagttcc agacgaccta tgcgggctgg cacgcgaccg gcatcgccct
     3301 tgcggac
//
LOCUS       DATAIQ010000849         2276 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_413551, whole genome shotgun sequence.
ACCESSION   DATAIQ010000849 DATAIQ010000000
VERSION     DATAIQ010000849.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2276)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2276)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2276
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_413551"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..596)
                     /locus_tag="VHN20_13950"
     CDS             complement(<1..596)
                     /locus_tag="VHN20_13950"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017484501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008177 - succinate dehydrogenase
                     (ubiquinone) activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase iron-sulfur subunit"
                     /protein_id="HEX2726916.1"
                     /translation="MAQFTLPKNSKYSEGKTWPKAGGKRTTAFRIYRWNPDDGKNPRI
                     DTYHVDRDDCGPMVLDALIWIKNKVDPTLVFRRSCREGICGSCAMNIMGENTLACTLA
                     IDDCQSDTVKIYPLPHMPVMKDLVPDLTSFFAQYATVEPWLKTETPEPETEWRQTPED
                     RSKLDGLYECILCACCTTSCPSYWWNGDRFLGPAALLQS"
     gene            complement(666..>2276)
                     /gene="sdhA"
                     /locus_tag="VHN20_13955"
     CDS             complement(666..>2276)
                     /gene="sdhA"
                     /locus_tag="VHN20_13955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004446645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase flavoprotein subunit"
                     /protein_id="HEX2726917.1"
                     /translation="LGNMGPDDWRWHMYDTVKGSDWLGDQDSIEYLVRNAPAAVYELE
                     HWGVPFSRTEDGKIYQRPFGGMTTDYGKGIAQRTCAAADRTGHAMLHTMYGQAVRNQT
                     NFFVEYFALDLIMEEGRCRGVVALDIATGEIHRFRAHMTILATGGYGRAYFSATSAHT
                     CTGDGNAMVLRAGLSLQDMEFVQFHPTGIYGSGCLITEGARGEGGYLTNGAGERFMER
                     YAPSAKDLASRDVVSRSMTIEIREGRGVGKNNDHIFLHLDHLDPKILAERLPGISESA
                     KIFAGVDVTREPIPVIPTVHYNMGGIPTNYHGEVVTLRNGDADHVVPGLMALGEAACV
                     SVHGANRLGSNSLIDLVVFGRAAALRCAEILEPNDKHADLPKDSADKALARLDRFRHA
                     AGGTPTAQLRDRMQRTMQNNCAVFRTGEVLEEGKRLIHDVWRGAGDIHVTDRSLVWNT
                     DLIETLEFDNLIQQAVVTMESAVVRTESRGAHAREDYPDRDDRNWMKHTLVWLDERSH
                     QVKIDYRPVHTYTMSNDIQYIEPKARVY"
BASE COUNT          333 a          720 c          795 g          428 t
ORIGIN      
        1 gattgcagca gcgcggcggg cccgagaaaa cggtcgccgt tccaccagta gctcgggcag
       61 gaggtcgtgc agcaggcgca caggatgcat tcgtagaggc cgtcgagctt gctgcgatcc
      121 tcgggcgtct gccgccattc cgtttccggc tccggcgtct ccgtcttcag ccacggctcg
      181 acggtggcgt attgcgcgaa gaagctcgtc aggtccggca ccaggtcctt catcaccggc
      241 atgtgcggca gcgggtagat cttgaccgtg tcggactggc agtcgtcgat cgcgagcgtg
      301 caggcgagcg tgttctcgcc catgatgttc atggcgcacg agccgcagat gccttcgcgg
      361 cacgagcgcc ggaagacgag cgtcgggtcg accttgttct tgatccagat cagcgcgtcg
      421 aggaccatcg ggccgcaatc gtcgcggtcc acatgatagg tgtcgatgcg cggattcttg
      481 ccgtcatccg gattccagcg gtagatgcgg aaggcggtcg tgcgcttgcc gcccgccttc
      541 ggccatgtct tgccttcgct atatttggaa ttcttgggaa gcgtgaactg ggccatgacg
      601 ctctctggat tctggtctcg tcctcgccgg gtcccggccc ggcgacaggt gcaattaacg
      661 cgcggtcaat acacgcgtgc cttgggctcg atgtactgga tgtcgttcga catcgtgtag
      721 gtgtgcaccg gccggtaatc gatcttcacc tggtgcgagc gctcgtcgag ccacaccagc
      781 gtgtgcttca tccagttcct gtcgtcgcgg tccggatagt cctcgcgcgc atgggcgccg
      841 cgcgactcgg tgcgcacgac ggcgctttcc atcgtgacga ccgcctgctg gatcaggttg
      901 tcgaactcga gcgtctcgat caggtcggtg ttccagacga gcgagcggtc ggtgacgtgg
      961 atgtcgcctg cgccgcgcca gacgtcgtgg atcaggcgct tgccttcctc gagcacctcg
     1021 ccggtgcgga acacggcgca gttgttctgc atggtgcgct gcatgcgatc gcgcaattgc
     1081 gccgtcggcg tgccgccggc ggcgtggcgg aagcggtcga gccgcgccag cgccttgtcg
     1141 gccgagtcct tcggcaggtc ggcatgcttg tcgttcggct cgaggatctc cgcgcagcgc
     1201 agcgctgcgg cgcggccgaa cacaacgagg tcgatgagcg agttggagcc gagccggttg
     1261 gcgccgtgca ccgacacgca ggcggcctcg ccgagcgcca tcaggcccgg caccacgtga
     1321 tcggcgtcgc cgttgcgcaa ggtcacgacc tcgccgtgat agttcgtcgg gatgccgccc
     1381 atgttgtaat gcacggtcgg gatcaccggg atcggctccc tggtcacgtc gacgccggcg
     1441 aagatcttcg cgctctccga gatgcccggc aggcgctccg ccaggatctt cgggtcgagg
     1501 tgatcgaggt gaaggaagat gtggtcgttg ttcttgccga cgccgcgtcc ttcgcggatc
     1561 tcgatggtca tcgagcgcga gacgacgtcg cgcgaggcga ggtccttggc cgacggcgcg
     1621 tagcgctcca tgaagcgctc gccggcgccg ttggtcaggt agccgccctc gccgcgcgcg
     1681 ccttccgtga tcaggcagcc ggagccgtag atgccggtcg gatggaactg cacgaattcc
     1741 atgtcctgca gcgacaggcc ggcgcgcagc accatggcgt tgccgtcgcc cgtgcaggta
     1801 tgcgccgagg tcgccgagaa ataggcgcgc ccgtagccgc ccgtcgccag gatcgtcatg
     1861 tgggcgcgga agcggtggat ctcgccggtg gcgatgtcga gggcgaccac gccgcggcag
     1921 cggccctcct ccatgatcag gtcgagcgca aaatactcga cgaagaagtt ggtctggttg
     1981 cgcacggcct ggccgtacat ggtgtgcagc atggcgtggc cggtgcggtc ggcggccgcg
     2041 caggtgcgct gcgcgatgcc cttgccgtag tcggtggtca tgccgccgaa ggggcgctgg
     2101 tagatcttgc cgtcctcggt gcgcgagaag ggcacgcccc aatgctcgag ctcgtagacg
     2161 gccgcgggcg cgttgcgcac caagtattcg atcgagtcct ggtcgccgag ccagtccgag
     2221 cccttgacgg tgtcgtacat gtgccagcgc cagtcgtccg gccccatgtt gccgag
//
LOCUS       DATAIQ010000850         2106 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_66000, whole genome shotgun sequence.
ACCESSION   DATAIQ010000850 DATAIQ010000000
VERSION     DATAIQ010000850.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2106)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2106)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2106
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_66000"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..699)
                     /locus_tag="VHN20_13960"
     CDS             complement(<1..699)
                     /locus_tag="VHN20_13960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlyA family RNA methyltransferase"
                     /protein_id="HEX2726918.1"
                     /translation="MPRQRADLLLLERGLFESRAKAQAAIAAGLVSAGGVTVRKPSEM
                     VDTAADVLAEAAHPYVSRGGVKLAAALDAFGIDPSGTTCLDLGASTGGFTDVLLRRGA
                     ARVYAVDVGQGQLHASLAHNPRVVSLERTDARRLDAVLVPEPIDVLVADLSFISLKLA
                     LAPAVARLAQGGSLVALIKPQFEAGRARVGKGVVRDEAVQRAVCDDIATFLGDIGLTV
                     LGVMPSPILGGEGNR"
     gene            875..1396
                     /locus_tag="VHN20_13965"
     CDS             875..1396
                     /locus_tag="VHN20_13965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015824394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006801 - superoxide metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase family protein"
                     /protein_id="HEX2726919.1"
                     /translation="MKAAFVSLLLAGALAAPALAQQGVETFEGTILGAKGQPIGKVAI
                     RSGENATLLRITIGPGGLTPGWHGAHFHQVGDCSDAGQFQLSKGHVNHENAKHGLLNP
                     DGPDEGDLPNLFANADGSVNAEISSEGIVLSGEQGLKDADGSALVIHANEDDHTSQPI
                     GNAGGRVACAVIK"
     gene            complement(1579..>2106)
                     /locus_tag="VHN20_13970"
     CDS             complement(1579..>2106)
                     /locus_tag="VHN20_13970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase C-terminal domain-containing
                     protein"
                     /protein_id="HEX2726920.1"
                     /translation="AAAYDAGPIAFRYPRGEGVGIDLPERGVPLAIGKGRVVKEGTRV
                     ALLSLGTRLAEALDAAEELDARGLSTTVADARFAKPLDEELILRLARNHEVLVTVEEG
                     SVGGFGSHVLQLLAERGVLDSGVKVRAMALPDVFLDHDRPERMYASARLDARGIVTKV
                     FEALGRDAGSLKVIA"
BASE COUNT          342 a          729 c          731 g          304 t
ORIGIN      
        1 gcggttgcct tcgccgccga ggatcggcga cggcatcacg ccgagcaccg tcaggccgat
       61 atctcccagg aatgtggcga tgtcgtcgca cacggcgcgc tgcacggctt cgtcgcgcac
      121 cacgcccttg ccgacacgcg cccgtccggc ctcgaattgc ggcttgatca gcgcgacgag
      181 actcccgcct tgcgcgaggc gcgcgacggc cggcgccagc gcaagtttca gcgagatgaa
      241 gctgagatcg gcgacgagga cgtcgatcgg ctccgggacg agtaccgcat cgagccggcg
      301 cgcatcggtg cgctcgaggc tcacgacgcg cgggttgtgc gcgaggctcg catgcagctg
      361 cccctgcccg acatcgaccg catagaccct cgcggcgccg cggcgcagca gcacgtcggt
      421 gaagccgccg gtcgaggcgc cgaggtcgag gcaggtcgtg ccggacggat cgatgccgaa
      481 ggcgtcgagc gccgccgcca gcttgacgcc gccgcgcgac acgtaagggt gcgccgcctc
      541 ggcgagcacg tccgcggcgg tatcgaccat ctcggaaggc ttgcgcacgg tgacgccgcc
      601 cgccgagacg agcccggcgg cgatggcggc ctgcgccttg gcgcggctct cgaacaaccc
      661 gcgttcgagg aggagaaggt cggcacgctg acgcggcatg gccttgcgcc tagccgcttt
      721 cgccggcgcc tgcaacgcag cgggaacgcg ctcccttcac ccgtccggga aaggcgctaa
      781 ggtgcgcccg ggcggctcat cggaggacaa gcgtggcagg gagccaatcg cagcttcgtg
      841 cgtttgtccc actcacgcga tggaggaaag ggtcatgaaa gcagcatttg tcagcctgct
      901 cctggcaggc gcgctcgccg cccccgctct ggcacagcag ggcgtcgaga cgttcgaggg
      961 caccatcctg ggcgccaagg ggcagcccat cggcaaggtc gccatcagga gcggcgagaa
     1021 cgcgacgttg ctgcgcatca ccatcgggcc cggcggcctc actcccggct ggcatggggc
     1081 gcacttccac caggtcggcg actgttcgga cgcgggccag ttccagctct cgaagggtca
     1141 tgtgaaccac gagaatgcca agcacggcct gctcaatccc gacggcccgg acgagggcga
     1201 cctgccgaac ctgttcgcca atgccgacgg ctcggtcaac gccgagatct cgtcggaagg
     1261 catcgtgctc tcgggcgagc agggcctcaa ggacgccgac ggctcggccc tcgtgatcca
     1321 cgccaatgag gacgaccaca ccagtcagcc aatcggcaat gccggcggtc gcgtcgcctg
     1381 cgcggtgatc aaatagaacg gggtcgcttc agcgcgaagc gaccggttct gatccttcgg
     1441 gacacatgat cttatgcggc gaagtgagcc tcacccccga ccaggtccgg ggcaggcttt
     1501 cgccggatca tggtgcaggg tcggtcgcat gatgttctgc ggcgaagtgg tgtacacttc
     1561 gccggatcat gctgtaggtc aggcgatcac tttcagagat ccggcgtcgc ggcccagggc
     1621 ctcgaacacc ttcgtgacga tgccgcgcgc gtcgagccgg gcgcttgcgt acatgcgctc
     1681 gggccggtcg tggtcgagga acacgtccgg cagcgccatg gcgcgcacct tgacgccgct
     1741 gtcgagcacg ccgcgctcgg cgagcagttg caggacgtgg ctgccgaagc cgccgaccga
     1801 gccttcctcg accgtgacca gcacctcgtg gttgcgcgcc agccgcagga tcagctcctc
     1861 gtcgagcggc ttggcgaagc gcgcgtcggc gacggtcgtc gagagcccgc gcgcgtcgag
     1921 ttcctcggcc gcatccagcg cctcggcgag acgggtgccg agcgaaagca gggcgacacg
     1981 cgtgccttcc ttgacaacgc ggcccttgcc gatggcgagc ggcacgcccc tttccggcag
     2041 atcgatgccg acgccctcgc cgcgcggata acggaacgcg atcgggcctg cgtcatacgc
     2101 ggccgc
//
LOCUS       DATAIQ010000851         1589 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_342429, whole genome shotgun sequence.
ACCESSION   DATAIQ010000851 DATAIQ010000000
VERSION     DATAIQ010000851.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1589)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1589)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1589
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_342429"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1261)
                     /locus_tag="VHN20_13975"
     CDS             complement(<1..1261)
                     /locus_tag="VHN20_13975"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEX2726921.1"
                     /translation="MCGTAVTADYGRFARRSAALASALARLGLAPGDRVAIAAHNCRE
                     YLEVLFGIWWGGFAAVPVNAKLHPAEIGWILDHSGARVVFASEDLAGGLSDRAAARLI
                     ALGSADYEGLAAHEAGALVPRHAGDLAWLFYTSGTTGRPKGAMLSHRNLVAMSLAYLS
                     DVDPTGPGDALLHAAPMSHGSGLYAMAHVCRMAVNAVPESGGFDPGEVLKSFRQVPRM
                     SMFAAPTMIRRLIDCPDDADPSAIRTIVWGGAPMHVADVLRALDRFGPCFAQIYGQGE
                     TPMTTTVLSKADIADRDHPRWRERLGSAGIANSVAEVRVADGDDRDVAVGAPGEVLVR
                     GDTVMTGYWANPEATRAALRDGWLHTGDIGAFDADGYLTLKDRSKALIISGGANLYPR
                     EVEEVLLTHPRVREASVIGRPDQEWGEV"
BASE COUNT          244 a          566 c          553 g          226 t
ORIGIN      
        1 ccacctcgcc ccattcctgg tccgggcggc cgatcaccga cgcctcgcgg acccgcggat
       61 gcgtgagcag gacctcctcc acttcgcgcg ggtagaggtt ggcgccgccg gagatgatca
      121 gggcctttga ccggtccttg agggtgaggt atccgtccgc gtcgaacgcg ccgatgtcgc
      181 cggtgtgcag ccacccgtcg cgcagcgccg cgcgcgtggc ctccgggttg gcccaatacc
      241 cggtcatgac cgtgtctccg cgcaccagga cctcgcccgg cgcgccgacg gccacgtcgc
      301 gatcgtcgcc gtcggcaacc cggacctccg ccaccgagtt ggcgatgcct gccgaaccga
      361 ggcgctcgcg ccagcgcggg tgatccctgt cggcgatgtc ggctttcgac agcacggtcg
      421 tcgtcatcgg cgtctcgccc tggccgtaga tctgcgcgaa gcacggcccg aagcgatcga
      481 gcgcgcgcag cacgtcggcg acgtgcatgg gcgcgccgcc ccagacgatg gtgcggatcg
      541 ccgacggatc ggcgtcgtcc gggcagtcga tcagccgccg tatcatggtc ggcgctgcga
      601 acatcgacat gcgcgggact tgcctgaagg acttgagcac ctcgcccggg tcgaagccgc
      661 ccgactcggg cacggcgttc accgccatgc ggcagacatg cgccatcgcg tagaggccgg
      721 agccgtggct catcggcgcg gcatgcagca gcgcgtcgcc cggacctgtc ggatcgacgt
      781 cggacaggta ggcgaggctc atggcgacca ggttgcggtg gctgagcatc gcccctttcg
      841 gccggccggt cgtgccggac gtgtagaaca gccaggcgag gtcgccggca tgacgcggca
      901 cgagcgcgcc tgcctcatgc gcggcgagac cctcgtagtc ggccgagccc agggcgatga
      961 gtcgtgccgc ggcgcgatcc gaaagcccgc ccgcaagatc ctccgacgcg aacacgaccc
     1021 gcgctcccga atggtccaaa atccagccga tctcggccgg gtgcagcttg gcgttcaccg
     1081 ggacggcggc gaagcctccc caccagatcc cgaaaagcac ttccagatat tcgcggcagt
     1141 tatgggcggc gatggcgacg cggtcgccgg gcgccaggcc gagccgggcg agcgcgctcg
     1201 cgagcgccgc ggaccggcgc gcgaagcggc cgtaatcggc cgtgaccgcg gtcccgcaca
     1261 tgagcgcagg cagtcgggga tgggacctgc cggcccgctc gagccaatgg gcgatgttca
     1321 tcggacgccg tgtcgcaaga gccgcgagca tgcccgacta gcgccccggg tcaaccggac
     1381 aacggtcgct ccgccctttc gcactctttc ggctggtgtc tcgcgcgatc ctgccggcac
     1441 ccgctcgcca tgcatcgggc catgcgtgcc atgcgggcat gtgcagcaga tgcaaagcgg
     1501 gacgagatcg cccgcttccg ctaacaggag cggttctaga gcatgatccg gcgaaagcct
     1561 gcccccggac ttgatccggg ggtggacac
//
LOCUS       DATAIQ010000852         5266 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_44074, whole genome shotgun sequence.
ACCESSION   DATAIQ010000852 DATAIQ010000000
VERSION     DATAIQ010000852.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 5266)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5266)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5266
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_44074"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(335..3595)
                     /locus_tag="VHN20_13980"
     CDS             complement(335..3595)
                     /locus_tag="VHN20_13980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011442713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HEX2726922.1"
                     /translation="MSSAAAEPQTDEKLCRDDVFTTDRLLEAEAHELGHPKELTALCL
                     SGGGIRSAAFALGVVQALARKGLLPHFHYLSTVSGGGYLGAWLSRWIEEEKRALTNVA
                     ASATQGNATSTAATAPPGDGAAYRREIAPGAKPNMPEAQGAECSALLNVQAALAGRDS
                     GTGAEPPPIRWLRENSNFITPRIGLASADTWTAIAMSVRNVLINWLVFLPALLVAAAI
                     PNLGASLLVVSSGWFADLCLIVGILLIGLASYKGAYNLPSHLPPGDRRDGGYVFSRVV
                     APAALGAAALAGGVAPHLLAPDAAALDRPFARLLHQGWFTFLTDKPLVAETLEVAFAC
                     AFLGMVGGYLVAAAAASRVARLGASNRKGFVRNFPLWLGGAAFAAAFYVAGLAMVPRV
                     PCPAGVSSCGLRVDVLATLAVFWGILAQLVVTIVFVAFRWVGRDQKLTPDLDREWLAR
                     LSAQKLRVAIAWTLFAGPVLLLWHLVVWLFVGVAGEGGPNYPVVVQWLTGAVGAVSGL
                     AAALGGKARRDATSWTERLLSSGVVLSVATFVSLLFLLLLMGRAEFGLAAWLAGYLAG
                     SWSLALAHVVVLAVVGWVLWKTSSYVKVNRFSLNGLYRNRLTKTFLGAARTVRPDADP
                     FTGFAPSDNIRLHALRAEHPVTGHRVLMPVINVALNLVGGSRLAWQERKAQAFVFTPL
                     ACGSAALGDLPEEPWDARLKRLVTHARDVIVSNDARRRALVAARKSLRTLRVPRIDRE
                     PDDAGGGRALSGPMRAPESEPAGRYIASTIYGGNEPDLGLNDIVAERGVSLGTAVAIS
                     GAAASPSMGYHSSAPTAFLMTLFNVRLGAWLPNPARTDLPQKAMMSSGPPNALLPLIR
                     ELLGLTNAQGTAVYLSDGGHFENLGLYEMVRRRCRYIVVSDAGCDPAAAFADLGNAIR
                     KIRIDLGVEIRIETVRIAARDKWDEKSSTYFALGTIKYPGQTPDGDLLYIKPSCAAGV
                     PSDVRAYALASKDFPHESTADQWFSESQFESYRSLGASLVEWLPNPKAPFKSYAKEGL
                     EGFFKDLRDAAAKPAGHEGDRPGLTADGLAGALANLCKAGPPPADAIIRNAPSETR"
     gene            complement(4034..4693)
                     /locus_tag="VHN20_13985"
     CDS             complement(4034..4693)
                     /locus_tag="VHN20_13985"
                     /inference="COORDINATES: protein motif:HMM:NF015682.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RraA family protein"
                     /protein_id="HEX2726923.1"
                     /translation="MQDIVSRLASLDTCAVSDALDKLGLPGCVTGLAPLSCQRRIAGR
                     VHTVKLAKKDEAAATSGPPRHLGSNAILAAEPGDIIVVEQRTGIDAGSWGGILSLGAK
                     LRDVAGVIADGPVRDVDEARQMDFPIYGRRPTARTARGRIAEIATDVPVTIGDVVVNP
                     GDFALADGSAVVFIPAAEAERVAAEAEKIAAREAAMADALRQGKPITEVMGADYEHML
                     R"
     gene            complement(4732..>5266)
                     /locus_tag="VHN20_13990"
     CDS             complement(4732..>5266)
                     /locus_tag="VHN20_13990"
                     /inference="COORDINATES: protein motif:HMM:NF014899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="extradiol ring-cleavage dioxygenase"
                     /protein_id="HEX2726924.1"
                     /translation="SDLANYLISTLIDDGFDIASTDQVREGAALDDAFTFPLEWLLDG
                     ETLPMVPFLLSRDLPNQAPPRRCYQLGLALRRAIAAWPRNERIGLVASGGLSHQIVDE
                     DFDREVIDALVSGNGEALAGLSRERLNRAPGTPETLNWVAVAAAMAPTRMTLVDYIPC
                     YRSAAGTGHGLTFGYWQ"
BASE COUNT          856 a         1775 c         1787 g          848 t
ORIGIN      
        1 accagggcca acccttgatt ttcctcaata acccgtcgct ggcggcgtgt tgttctcttg
       61 gtgaggacga cgcagctcgg tccaatgcgc cgccctcggc ctcggctcgc ggctgcggcg
      121 ccgcgggttg aggttccact gaaacggccg atggttcgtg agaggcggcg caggcaatcg
      181 cattcagcca ttgggcaagg ccggccgtgg cgcttttcgg gatcgtgtcg gatcatgctg
      241 tcgcccatca cctcccgcgc ggacgtctct cggcgcagta ttcctgttcg gcgcgcgacg
      301 tcgttctgag gacggcgatg tttcctggcg cggcttacct cgtctccgag ggcgcgttgc
      361 ggatgatcgc gtcggcaggc ggggggccgg ctttgcaaag gttggcgagg gcgcccgcga
      421 gtccgtcggc cgtcaggccc ggcctgtcgc cctcgtgccc ggcgggtttc gcggctgcgt
      481 cgcggagatc cttgaagaag ccttcgaggc cttcctttgc gtagctcttg aacggtgcct
      541 tcgggttcgg gagccactcg acgaggctcg cgccgaggct tctgtagctc tcgaactgcg
      601 actcgctgaa ccattggtcg gccgtcgact cgtgcgggaa atccttgctc gccagcgcat
      661 acgccctgac gtcgctcggc acgcccgccg cgcagctcgg cttgatgtag agcaggtctc
      721 catcaggggt ttgccccgga tacttgatcg tgccgagcgc gaagtacgtc gagcttttct
      781 cgtcccactt gtcgcgagcg gcgatgcgca cggtttcgat cctgatttcg acaccgaggt
      841 cgatcctgat ctttcggatc gcgttgccga gatccgcgaa agcggccgcg ggatcgcatc
      901 cggcatcgct gacgacgatg tagcggcacc tgcgccggac catctcgtac aatccgagat
      961 tctcgaaatg accgccgtcc gacagataga ccgcagtacc ttgcgcgttc gtcaggccga
     1021 gcagctcgcg gatcagcgga agaagcgcgt tcggcgggcc ggagctcatc atcgccttct
     1081 gcggcaggtc ggtccgggcc ggattgggca gccaggcgcc gagccggacg ttgaagagcg
     1141 tcatcaggaa cgccgttggc gccgaggagt gatagcccat gctcgggctc gcggcagcgc
     1201 cggagatcgc caccgccgtg ccgagcgaca cgccgcgttc ggcgacgatg tcgttgagcc
     1261 cgaggtccgg ttcgttcccg ccatagatcg tcgacgcgat atagcggccc gccggctcgc
     1321 tctcgggcgc ccgcatcggg cccgacaagg cgcgtcctcc gccggcatca tcgggttcgc
     1381 ggtcgatccg agggacgcgg agcgtcctca gggacttcct ggccgccacg agggcccgcc
     1441 gccgggcgtc gttgctgacg atgacgtcgc gcgcgtgagt cacgagccgt ttcaggcggg
     1501 cgtcccacgg ctcttccggc aggtcgccga gcgcggcgct tccgcaggcg agaggcgtga
     1561 acacgaacgc ctgcgccttg cgttcctgcc aggcgaggcg cgagccgccg acgaggttga
     1621 gcgcaacgtt gatgaccggc atcagcacgc gatggcccgt taccgggtgc tccgccctca
     1681 gcgcgtgcag gcggatgttg tcggatggcg cgaagccggt gaacgggtcg gcgtcgggac
     1741 gcaccgtgcg ggccgcgccg agaaacgtct tggtgagacg gttccggtag aggccgttca
     1801 gcgagaagcg gttcaccttg acgtacgacg acgtcttcca gagcacccag ccgacgacgg
     1861 cgaggacgac gacatgcgcc agcgctagcg accacgagcc ggcgaggtag cctgccagcc
     1921 aggcggcaag gccgaactcg gcacggccca tcagcagaag caggaacagc agcgacacga
     1981 aggtggcgac gctgaggacg acgcccgacg acaggagccg ctccgtccag ctggtcgcgt
     2041 cccggcgcgc cttgccgccg agcgccgcgg cgaggccgga caccgcgccc accgctcccg
     2101 tcagccattg cacgacgacc gggtaattcg gccctccttc tccggcgacc ccgacgaaca
     2161 gccagacgac gaggtgccac aagaggagga caggtccggc gaacagggtc cacgcgatcg
     2221 ccacgcggag cttctgcgcg ctcagtcggg cgagccattc gcggtcgaga tcgggcgtga
     2281 gcttctggtc cctgccgacc cagcggaacg cgacgaaaac gatcgtgacc acgagctggg
     2341 cgaggatgcc ccaaaatacg gcgagcgtgg caagcacatc gacacgcagt ccgcaactcg
     2401 acaccccggc ggggcagggg acgcgcggga ccatggcgag gcccgcgaca tagaacgccg
     2461 ccgcgaacgc cgcgccgccg agccacaggg ggaagttgcg cacgaagcct tttcggttcg
     2521 acgcgccgag acgtgcgacc cgtgacgccg cggccgccgc gacgaggtag cctccgacca
     2581 tgccgaggaa cgcacaggcg aacgccacct cgagcgtttc cgcgacgagc ggcttgtccg
     2641 tcaggaacgt gaaccagccc tggtgcagca gccgcgcgaa cggacggtcg agcgccgccg
     2701 cgtccggcgc aagcagatgc ggcgcgacgc cgcctgccag tgcggcagcg cccagcgccg
     2761 ccggcgcgac cacacgcgaa aacacgtagc cgccgtctct ccggtcgccg ggtgggagat
     2821 ggctcggcag gttgtacgcg cccttgtagc tggcaagacc gatcaggagg atgccgacga
     2881 tcaggcacag atcggcgaac cacccgctcg agacgacgag aagagatgcg ccaagattcg
     2941 ggatggctgc cgcgacaagc agcgcgggca ggaacaccag ccagttgatc agcacgttgc
     3001 gcaccgacat ggcgatcgcc gtccacgtgt cggcgctcgc aaggccgatc cgcggcgtga
     3061 tgaagttcga gttttcgcgc agccagcgga tcggcggtgg ctccgcgccg gttccgctgt
     3121 cgcggcctgc gagcgcagcc tgcacgttca acagcgccga acattccgcg ccttgagctt
     3181 ccggcatgtt gggctttgcg ccgggcgcga tctcacggcg ataggccgct ccgtcaccgg
     3241 gcggcgcggt tgcggccgtg ctcgtcgcgt tgccctgcgt tgccgaagcc gcaacattcg
     3301 tcagcgcgcg cttttcctcc tcgatccagc gcgacagcca cgcgccgaga tagccgcctc
     3361 ccgacaccgt cgagagataa tgaaagtgcg gcagaagccc tttgcgggcg agcgcctgaa
     3421 cgacgccgag cgcgaaggcc gcgctcctga tccccccgcc ggacaggcag agggcggtca
     3481 gctccttcgg gtggccgagt tcatgtgcct cggcctcgag cagccggtcc gtcgtgaaca
     3541 cgtcgtcccg acacagtttc tcgtccgtct ggggttctgc ggccgcgctc gacatgctga
     3601 cctcgctttg gcatccgcgt tccggaagat cgtcgccttc aggattcgcc ggttgcgtcg
     3661 cggcgcgggc tgcgggtgca gggccacacc caacgggaca tgcgggtgtg caaggctcgg
     3721 ccgacgcgct acccagcccg catagggctc acatccggca aatctgaacg cgcatggaaa
     3781 tctccaccgc acgttgtgac ggagctcacc ttagccaaaa tgctccaggc gcaatgtgga
     3841 gcgcttcaca cgtcctgcgg catgatgctc gccggaattg ggtgccatgt cgaaccttcg
     3901 aaggcccggg cggtgccgac gagaagaagg acggcagaga taagtgtgac gctcgaccag
     3961 ctgccttagc gccgaacatg cagcatcgcc gcgcgctgct gacgtttctc tcgatcactg
     4021 cccatgtcgc tgcttagcgc aacatgtgct cgtaatcggc ccccatcacc tcggtgatcg
     4081 gctttccctg tctcagggcg tcggccatcg cggcttcgcg cgccgcgatc ttctccgcct
     4141 ctgcggccac gcgctcggcc tcggccgcgg ggatgaacac gacggcgctg ccgtcggcaa
     4201 gggcgaagtc gcccggattc acgaccacgt cgccgatcgt gaccggtaca tcggtggcga
     4261 tctcggcaat gcgcccgcgt gcagtccggg ctgtgggcct gcgcccataa atcggaaaat
     4321 ccatctggcg ggcttcatcg acgtcgcgca cgggaccatc agcgatcacg ccagcgacgt
     4381 cacgcagctt ggctccgagg gacaggatgc cgccccacga gccggcgtcg attcccgtcc
     4441 tctgctcgac cacgatgatg tcgcccggct ccgcggccag aatggcgttg ctgccgaggt
     4501 ggcgcggagg accggacgtt gctgccgcct catccttctt cgcgagcttc accgtgtgga
     4561 cgcgtccggc gatcctccgc tggcatgaca ggggagcaag acccgtgacg catccgggca
     4621 gcccgagctt gtcgagcgcg tcggagactg cgcatgtgtc gaggctcgcc agtcgcgaaa
     4681 cgatgtcctg cattctctgc gctcccctgt gcccggccgt cgctcgcgac atcactgcca
     4741 gtagccgaat gtgagcccgt gcccggttcc cgcggccgag cggtaacatg gaatgtagtc
     4801 gacaagcgtc atgcgggtcg gcgccatcgc ggcggcgacg gcgacccagt tcagcgtctc
     4861 gggtgttcca ggcgcccggt tcagccgctc gcgcgaaagc ccggctagcg cctcgccgtt
     4921 gccgctcacc agcgcgtcga tcacctcgcg atcgaagtct tcgtcgacga tctggtgact
     4981 gaggccgccg gatgcgacga gcccgatgcg ttcgttcctg ggccatgcgg caatggctcg
     5041 gcgcagggcg agtccgagct gatagcagcg gcgcggcggg gcttggttgg gcagatcgcg
     5101 gctcagcagg aacggcacca tcgggagcgt ctcgccgtcg agcagccatt ccaacggaaa
     5161 ggtgaatgcg tcgtcgagag cagcgccttc ccgcacctgg tccgtcgagg cgatgtcgaa
     5221 gccgtcgtca atgagcgtgc tgatgaggta attggcgagg tcgctg
//
LOCUS       DATAIQ010000853         3621 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_413801, whole genome shotgun sequence.
ACCESSION   DATAIQ010000853 DATAIQ010000000
VERSION     DATAIQ010000853.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3621)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3621)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3621
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_413801"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..288
                     /locus_tag="VHN20_13995"
     CDS             <1..288
                     /locus_tag="VHN20_13995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726925.1"
                     /translation="RSMSERPLTGVASAFYAQFRFTRVNLPQAARLPSCRRPLLCLIG
                     VAAPLTPVFATPGPDGPSVPEQAEAPIGVRALMAMALRRTPLGGLPRQARQ"
     gene            412..1182
                     /locus_tag="VHN20_14000"
     CDS             412..1182
                     /locus_tag="VHN20_14000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018262582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine 5'-nucleotidase"
                     /protein_id="HEX2726926.1"
                     /translation="MNAVPQLKPHLSATDARRFGHIDTWIFDLDNTLYPSEARVWPQV
                     DDRITLFIANLYGIDGLSARALQKYFYHRYGTTLKALMDEDGIDPYEFLDFAHDIDHS
                     DIELNPLLGEAIEKLPGRKLILTNGSRKHAETVAMKLGIYDHFEDVFDIVASDYVPKP
                     ERRAYEKFLSKHVVDPQRSAIFEDIAKNLVVPHDLGMTTTLVIPKIIDPFRESFEQEA
                     VEAPHIDYITNDLAGFLKEQIGVNGAPSPPKRERSSPQ"
     gene            complement(1265..2026)
                     /locus_tag="VHN20_14005"
     CDS             complement(1265..2026)
                     /locus_tag="VHN20_14005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002712884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX2726927.1"
                     /translation="MNLEAVRAIYLFEMARTGRTLLQSIVSPVISTSLYFVVFGAAIG
                     SRITEIEGVAYGAFIVPGLIMLMLLTQSVANASFGIYFPRFTGTIYELLSAPVSYVEI
                     VIGYVGAATTKSIILGLIILATAGLFVPLRIAHPVWMLAFLLLTAVTFSLLGFIIGIW
                     ADGFEKLQLVPLLILTPLTFLGGTFYSVSVLPPIWQKLALLNPVVYLISGFRWSFFET
                     ADVSVGVSLAMTLVFLAACLALTWWIFRTGYRLKT"
     gene            complement(2032..2955)
                     /locus_tag="VHN20_14010"
     CDS             complement(2032..2955)
                     /locus_tag="VHN20_14010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007613497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2726928.1"
                     /translation="MAPIIHVSDLSKTYASGFRALKHVDLGIARGEIFALLGPNGAGK
                     TTLINIICGIVNPSAGKVTVDGHDIITDFRAARSLIGLVPQELTTDAFETVRATVSFS
                     RGLFGKRADPDHIARVLKDLSLWDKRDAKIMTLSGGMKRRVLIAKALAHEPQILFLDE
                     PTAGVDVELRQDMWELVRSLRASGVTVILTTHYIEEAEEMADRVGVINKGEIILVEDK
                     VALMRKLGRKQLTLHLHQRLEAVPAALAAHRLTLADQGTELVYSYDTQGERTGITRLL
                     DDLAAAGITFRDLHTTQSSLEDIFVDLVRRT"
     gene            3098..>3621
                     /locus_tag="VHN20_14015"
     CDS             3098..>3621
                     /locus_tag="VHN20_14015"
                     /inference="COORDINATES: protein motif:HMM:NF016999.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0010468 - regulation of gene expression
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB family transcriptional regulator"
                     /protein_id="HEX2726929.1"
                     /translation="MRSYLPDSTTVRRVAETVVIGAIGGMIFHYAGFPAGLVSGSIVA
                     AAIAALAGRPLMVPTRMVRVILVLVGIALGSVVTPDTLRGFATYPVSIAFLCLSTIGI
                     TAAAGVYLLYVHRWNPVSALLGASPGALAQAIALSAEIGADARGVVVVQTIRVVLLAI
                     GIPAGLAWFGLSGGG"
BASE COUNT          604 a         1168 c         1228 g          621 t
ORIGIN      
        1 cggagcatga gcgaaaggcc tttgactgga gtggcttcgg ccttttatgc gcaatttcgt
       61 ttcacccgcg taaacttgcc gcaggcggct cgacttcctt cgtgccgtcg tccgctgctt
      121 tgcctcatcg gtgttgccgc cccgctcacg cccgtgtttg ccacgcccgg tcctgatggt
      181 ccttcggtgc ccgaacaggc tgaagcgccg atcggggtcc gggcattgat ggcgatggcg
      241 ttgcggcgca cgccgcttgg tggattgccg cgtcaagcgc ggcaatgacg acgacgaggc
      301 ttgcctatca ccaggggccc agcagggctg gcgaaaccct ttgcgtaacc agtcgttaac
      361 gctatcctag gaccctgaat ggggccgttc gggccccatt ttcgtctccc catgaacgcc
      421 gtgccgcaac tcaagcccca cctctccgcc accgacgcgc gcaggttcgg gcatatcgac
      481 acctggattt tcgacctcga caatacgctc tatccgagcg aagcgcgggt gtggccgcag
      541 gtagatgacc gcatcacgct gttcatcgcc aacctttacg gcatcgatgg cctgtcggcg
      601 cgggcgctgc agaaatactt ctaccaccgc tacggcacca ccctgaaggc gctgatggac
      661 gaggacggca tcgacccgta cgagttcctc gacttcgcgc atgacatcga ccactcggat
      721 atcgagctca atccgctgct cggcgaggcg atcgagaagc tgcccgggcg caagctgatc
      781 ctgaccaacg gctcgcgcaa gcatgccgag acggtcgcca tgaagctcgg catctacgac
      841 catttcgagg atgtgttcga catcgtcgcg tccgattacg tgccgaagcc cgagcggcgc
      901 gcctacgaaa aattcctcag caagcacgtg gtcgatccgc agaggtcggc catcttcgag
      961 gacatcgcca agaatctcgt cgtgccgcac gacctcggca tgaccacgac cctcgtgatc
     1021 ccgaaaatca tcgatccgtt ccgcgagagt ttcgagcagg aggcggtcga ggcgccgcat
     1081 atcgactaca tcaccaacga cctcgcggga ttcctgaagg agcagatcgg ggtgaacggc
     1141 gctccctctc ccccgaagcg ggagaggtcg agtccgcaat agcggaccgg gtgagggcca
     1201 gcgcccctct cccgtctccc ctccccctcc tctcccgtaa gcgggagagg gagcgcgtcg
     1261 cgcctcacgt cttcaggcga tagccggtcc tgaagatcca ccaggtcagg gcgaggcagg
     1321 cggcgaggaa gacgagggtc atcgcgaggc tcacgccgac gctgacgtcc gcggtctcga
     1381 agaagctcca gcggaagccg ctgatcaggt agacgaccgg gttgagcagc gcgagcttct
     1441 gccagatggg cggcaggacg ctgaccgagt agaaggtgcc gccgaggaag gtgagcggcg
     1501 tcaggatcag gagcggcacg agctgcagct tctcgaagcc gtcggcccag atgccgatga
     1561 tgaagccgag caggctgaag gtcacggcgg tgagcagcag gaaggcgagc atccagaccg
     1621 gatgggcgat gcgcaacggc acgaacaggc cggcggtggc gaggatgatc aggccgagga
     1681 tgatcgactt ggtggtggcg gcgccgacat agccgatgac gatctcgaca tacgagacgg
     1741 gcgccgacag gagctcgtag atggtgccgg tgaaacgcgg gaaatagatg ccgaacgagg
     1801 cgttggcgac gctctgcgtg agcagcatca gcatgatcag gccgggcacg atgaaggcgc
     1861 cgtatgcgac tccctcgatc tcggtgatgc gcgagccgat ggcggccccg aacacgacga
     1921 aatacagcga ggtcgagatc acgggcgaga cgatgctctg caggagcgtg cgcccggtgc
     1981 gcgccatctc gaacaggtag atggcccgca ccgcctcgag attcatcccc ttcatgtgcg
     2041 cctcacgaga tcgacgaaga tgtcctcgag cgagctttgc gtcgtgtgca gatcgcggaa
     2101 cgtgatgccg gccgcggcga gatcgtcgag caggcgcgtg atgccggtgc gctcgccctg
     2161 ggtgtcgtag ctgtagacca gctccgtgcc ctggtcggcg agggtcagcc ggtgcgccgc
     2221 gagcgcggcc gggaccgcct cgagccgctg atgcaggtgc agcgtgagct gcttcctgcc
     2281 gagcttgcgc atgagcgcga ccttgtcctc gaccaggatg atctcgccct tgttgatcac
     2341 gccgacgcgg tcggccatct cctcggcctc ctcgatgtag tgcgtggtca ggatcacggt
     2401 gacgcccgag gcgcgcaggc tgcgcacgag ctcccacatg tcctggcgca gctcgacgtc
     2461 gacgccggcg gtcggctcgt cgaggaacag gatctgcggc tcgtgcgcga gcgccttggc
     2521 gatcagcacg cgccgcttca tgccgcccga cagggtcatg atcttggcgt cgcgcttgtc
     2581 ccataaggac aggtccttga gcaccctggc gatgtggtcg ggatcggcgc gcttgccgaa
     2641 caggccgcgg ctgaaggaga ccgtcgcccg cacggtctcg aaggcgtccg tggtgagctc
     2701 ctgcggcacg aggccgatca gcgagcgggc ggcgcggaag tcggtgatta tgtcgtggcc
     2761 gtcgacggtc accttgccgg cggacgggtt gacgatgccg cagatgatgt tgatcagcgt
     2821 cgtcttgccg gcgccgttgg gcccgagcag cgcaaagatc tcgccgcggg cgatgccgag
     2881 gtcgacgtgc ttcagcgccc ggaagcccga cgcgtaggtc ttcgacagat cggagacgtg
     2941 gatgatggga gccatggtcc tggtcgccgg cgcgggaacc ctgcctatgg ggtgcagggg
     3001 gcgaggtgtt aaggggcggc cggccggaag tccaattcat tccgggcatg ccgtggctgc
     3061 gctttgcacc tgcggcacct ccccctaaga gagcctgatg cgctcctacc tgcccgactc
     3121 gaccacggtg cgccgcgtcg ccgagaccgt cgtgattggc gccatcggcg ggatgatttt
     3181 ccattacgcc ggatttccgg cgggcctggt gtcgggctcc atcgtcgccg cggcgatcgc
     3241 ggccctggcg ggccgcccgc tcatggtgcc gacgcgcatg gtgcgggtga tcctcgtgct
     3301 ggtcggcatc gcgctcggct cggtggtgac gccggatacc ctgaggggct tcgccaccta
     3361 tcccgtcagc atcgcgttcc tgtgcctctc gaccatcggc atcacggccg cggccggcgt
     3421 ctatctcctc tacgtgcacc ggtggaaccc ggtctcggcc ctgctcggcg cgagcccggg
     3481 cgccctggcg caggccatcg ccctgtcggc cgagatcggc gccgacgcgc gcggcgtcgt
     3541 tgtggtgcag accatccgcg tcgtgctgct ggcgatcggc atcccggccg gcctcgcctg
     3601 gttcggcctg tccggcggcg g
//
LOCUS       DATAIQ010000854         4021 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_342502, whole genome shotgun sequence.
ACCESSION   DATAIQ010000854 DATAIQ010000000
VERSION     DATAIQ010000854.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4021)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4021)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4021
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_342502"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1755
                     /locus_tag="VHN20_14020"
     CDS             <1..1755
                     /locus_tag="VHN20_14020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018856978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HEX2726930.1"
                     /translation="GDVMEATSRLYGTADAEPTPQLRFDAKWVIIGLSVALVAWLALV
                     PLVFLLWQSAMTPETASKPAEFTLGNYVDAYTSGDTLHLFWNSVQFATGTALLALTVG
                     TFFAWVNERTNTPFKALFFAISIVPLIIPGILFTVAWIMLASPKIGILNLVLQNWFGV
                     TGPVFDVYSMAGMIWVDGLHYSPVAFLLVTAALRSMDPSLEESAVMSGASIFHIAYHI
                     TLKLAWPAVLAAFIILFVRAIESFEVPALLGLPVGIEVFTSSIYQAIHRYPSNVGLAS
                     AYAVTLLLLTSIGIYFQTRLSSQGSKFSTVTGKGFRPRVINLGRWRYLTGGIFVVYGL
                     LVIVLPFLVLVWSSLQKYYSVPSWAALSKVSLDAYRTVLDYPGFATSVWNSITLSLGS
                     ATIIMLLTAVIGWIVVRTKIPGRWLLDNLASLPLVFPGIVLGLSIMICYLTLGGGIYG
                     SIWIMLIAYVTRFLPYGMRYNMTSMIQIHKELEESAAMSGASWSTTFRRILLPLLKPG
                     MLAGWIYVVIVSIRELSSSILLYSPGNEVVSIMIWEFWQNGQYVELSAFGVMLIAFLF
                     VFVMLAQLAGKRFGVKEA"
     gene            1774..2901
                     /locus_tag="VHN20_14025"
     CDS             1774..2901
                     /locus_tag="VHN20_14025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018856975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2726931.1"
                     /translation="MLSVRSLNTEYPSQRGPAVKAAQNVTFEVPEGELFTLLGPSGCG
                     KTTTLRSIAGLERPTSGEIQVGGRVVYSSQRRVFVPPNKRDFGMVFQSYAIWPHMNVF
                     QNAAFPLQVRSSKLSTQQIRDKVMRVLNAVGLDHLADREATKLSGGQQQRLALARALV
                     MEPKLLLLDEPLSNLDAKLRERMRFELKRIQRELRLTTIYVTHDQSEALALSHEIAVM
                     NEGKIVQIGSPRDIYERPQAKFVADFIGTTNFIDGTVAGRDERSGRWQVNTPLGMLRV
                     NAESLTRDAPVVISVRPEDVELSDAPPANADAYNVTRGIVDQKVFLGEYVDFQVKVGN
                     TILLARAHPSLRTPIGDPIHVRMDPEKCIALPEAMGIREAA"
     gene            2952..>4021
                     /locus_tag="VHN20_14030"
     CDS             2952..>4021
                     /locus_tag="VHN20_14030"
                     /inference="COORDINATES: protein motif:HMM:NF014136.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX2726932.1"
                     /translation="MAKDAIVSDELAKKFATEKDTPYTRWVREEGLDIVSAHYVRNLR
                     TVELKPWARRGGKGVFINHEASRTSNDCYVCEIAPGSKLAPQRQLFEEMILVLEGRGS
                     TSVWNDAGQRITFEWKAGVLFAIPLNTWHQHFNGSGQEPARFVSVTNMPPVMNLYEDV
                     EFLFNTSYDFKSRFAGEPDYFSNKGEQKGLLLETNFVADAVNLPLISAKERGAGGGHI
                     RFNMAKGSMNSHISQFPIGTYKKGHRHGPGAHVIILSGEGYSLMWPEGEEPRRYDWEV
                     GTMIVPPNMWFHQHFNTGTTPARYLAFKHEVVSIRNAQGVPKAWISMRIGGDQIDYAD
                     ERPLVRTMFADELGKHGLKPRM"
BASE COUNT          693 a         1310 c         1262 g          756 t
ORIGIN      
        1 ggagacgtca tggaagcgac cagtcggctg tatgggacgg ccgatgccga accgacgccg
       61 cagctgcggt tcgacgccaa atgggtgatc atcggcttgt cggtcgcgct cgtggcgtgg
      121 ctggcgctgg taccgctcgt cttccttctc tggcagagcg cgatgacccc ggagacggcg
      181 tcaaagccgg cggagttcac gctcggcaac tacgtcgacg cctacacgag cggcgacacg
      241 ctgcatctgt tctggaattc ggtgcagttc gcgaccggca ccgcgcttct ggcgcttacg
      301 gtgggcacgt tcttcgcctg ggtcaacgag cgtaccaaca cgccgttcaa ggcgttgttc
      361 ttcgccattt ccatcgttcc gctgatcatt cccggcatcc tcttcacggt cgcctggatc
      421 atgctggcga gtccgaagat cggcattctc aacctggtcc tgcagaactg gttcggggtg
      481 accggcccgg tcttcgacgt ctattcgatg gccggcatga tctgggtcga cggcctgcac
      541 tactccccgg tcgcctttct gctggtgacc gctgcgctcc gctcgatgga tccctccctc
      601 gaggaatcgg cggtcatgag cggtgcgtcg atcttccaca tcgcctacca catcacgctg
      661 aagctggcgt ggccggcggt gctggcggcg ttcatcatcc tgttcgtgcg cgccatcgag
      721 tcgttcgaag tgccggccct gctcggcctg ccggtgggca tcgaggtgtt cacgtcgtcg
      781 atctaccagg cgatccatcg ctacccgagc aatgtcgggc tggcctcggc ctacgccgtg
      841 acgcttctcc tgctcacctc gatcggcatc tatttccaga cgcgtctgtc cagtcagggc
      901 agcaagttct cgaccgtgac tggcaagggc ttccggccgc gggtcatcaa tctcggccgc
      961 tggcgctacc tgacgggcgg aatcttcgtc gtctacggcc tgctggtgat cgtgctgcca
     1021 ttcctggttc tggtctggtc gtcgctgcag aaatactaca gcgtcccgag ctgggcggcg
     1081 ctcagcaagg tatcgctcga cgcctaccgc acggtcctcg actacccggg cttcgccacg
     1141 tcggtgtgga acagcatcac gctgtcgctc ggctcggcca cgatcatcat gctgctgacg
     1201 gccgtgatcg gctggatcgt cgtgcggacc aagatcccgg gccgctggct gctcgacaac
     1261 ctcgcctcgc tgccgctggt cttccccggc atcgtgctcg gcctttcgat catgatctgc
     1321 tacctgaccc tgggcggcgg catctacggc tcgatctgga tcatgctgat cgcctatgtg
     1381 acgcgcttcc tgccctacgg catgcgttac aacatgacct cgatgatcca gatccacaag
     1441 gagctcgagg agtcggcggc catgagcggc gcttcgtgga gcacgacgtt ccggcgcatc
     1501 ctgctcccgc tcctgaagcc cggcatgctc gccggctgga tctacgtcgt gatcgtctcg
     1561 atccgcgagc tgtcgagctc gatcctgctc tacagcccgg gcaatgaggt cgtctcgatc
     1621 atgatctggg agttctggca gaacggccag tatgtcgagc tgtcggcctt cggcgtcatg
     1681 ctaattgctt tcctattcgt ttttgtcatg ttggcgcagc ttgccggcaa gcgcttcggc
     1741 gtgaaggaag cctgaggatc ggggggaaat cgcgtgctca gcgtcaggtc attgaatacc
     1801 gaatatccgt cgcagcgcgg cccggccgtc aaggcggcgc agaacgtcac gttcgaggtg
     1861 cccgaaggcg agctgttcac gctgctcggc ccgagcggct gcggcaagac gacgaccctg
     1921 cgctccatcg ccggcctgga aaggccgaca tccggggaga ttcaggtcgg cggccgcgtc
     1981 gtttattcgt cgcagcgccg cgtcttcgtc ccgcccaaca agcgcgactt cgggatggtg
     2041 ttccagtcgt acgcgatctg gccgcacatg aacgtgttcc agaacgccgc ctttccgctg
     2101 caggtgcgct cgagcaagct gagcacgcag cagatccgtg acaaggtgat gcgcgtcctc
     2161 aatgccgtcg gcctcgatca tctcgccgac cgcgaagcaa ccaagctgtc gggcggccag
     2221 cagcagcgtc tggcgcttgc gcgcgcgctg gtcatggagc cgaagctgtt gctgctcgac
     2281 gagcctctat ccaatctcga cgccaagctg cgcgagcgca tgcgcttcga gctgaaacgc
     2341 atccagcgtg agctcaggct gacgacgatc tacgtgaccc acgaccagag cgaggcgctc
     2401 gcgctctcgc acgagatcgc ggtgatgaac gaaggcaaga tcgtgcagat cggctcgccg
     2461 cgcgacatct acgagcggcc gcaggcgaaa ttcgtggccg acttcatcgg cacgaccaac
     2521 ttcatcgacg gcaccgtcgc cggccgggac gagcgcagcg ggcgctggca ggtgaacacg
     2581 ccgctcggaa tgttgcgggt caatgccgag agcctcaccc gtgacgcgcc ggtcgtgatt
     2641 tccgtgcggc ccgaggatgt cgagctctcc gatgctcctc ccgccaatgc ggatgcctac
     2701 aacgtgacgc gcggcatcgt cgaccagaag gtgttcctgg gcgagtatgt ggacttccag
     2761 gtcaaggtcg ggaacacgat cctgctcgcc cgcgcgcatc cctctctgcg cacgccgatc
     2821 ggcgatccga tccacgtccg catggatccc gagaaatgca tcgcgctccc cgaagcgatg
     2881 ggaatccgcg aagccgcctg aggtcacgcc cttacattca tccgccgagt gccaacaacc
     2941 aggagtgcgc catggcaaag gacgccattg tttccgacga actcgcgaag aaattcgcca
     3001 ccgagaagga cacgccgtat acgcggtggg tgcgcgagga gggtctcgac atcgtcagcg
     3061 cgcattacgt gcgcaacctg cgcacggtcg agctgaagcc gtgggcccgg cgcggcggca
     3121 agggcgtgtt tatcaaccac gaggcgtcgc gcacgtccaa cgattgctac gtctgcgaga
     3181 tcgcgcccgg gagcaagctg gcgccgcagc gccagctgtt cgaggagatg atcctggtgc
     3241 tcgagggtcg cggctcgacg agcgtgtgga acgacgccgg ccagcgcatc accttcgagt
     3301 ggaaggctgg cgtcctgttc gcgatcccgc tcaatacctg gcatcagcac ttcaacggct
     3361 cgggccagga gccggcgcgc ttcgtgtcgg tcaccaacat gccgccggtg atgaacctct
     3421 atgaggacgt cgagttcctg ttcaacacgt cctacgactt caagagccgt ttcgccggcg
     3481 agcctgacta tttcagcaac aagggcgagc agaagggcct gctgctggag acgaacttcg
     3541 tcgccgacgc ggtcaacctg ccgctcatca gcgccaagga gcgtggggcc ggcgggggcc
     3601 acatccgctt caacatggcc aagggctcga tgaacagcca tatctcgcag ttcccgatcg
     3661 gcacctacaa gaaaggccac cggcacggcc caggcgccca cgtcatcatc ctcagcggcg
     3721 agggttactc actgatgtgg ccggaaggcg aggagccccg gcgctacgat tgggaagtcg
     3781 gcactatgat cgtgccgccg aacatgtggt tccaccagca cttcaacacc ggcacgacgc
     3841 cggcgcgcta tctggcgttc aagcacgagg tcgtctcgat ccgaaacgcg cagggcgtgc
     3901 cgaaggcgtg gatcagcatg cgcatcggcg gcgatcagat cgattacgcc gacgagcggc
     3961 cgctggtgcg cacgatgttc gccgacgagc tcggcaagca cggcctcaag ccgcgcatgg
     4021 a
//
LOCUS       DATAIQ010000855         1505 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_459335, whole genome shotgun sequence.
ACCESSION   DATAIQ010000855 DATAIQ010000000
VERSION     DATAIQ010000855.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1505)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1505)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1505
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_459335"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..517
                     /locus_tag="VHN20_14035"
     CDS             <1..517
                     /locus_tag="VHN20_14035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726933.1"
                     /translation="VPPRARRPLPPFEDETMRTERVQPQPGDEPTRAQRPQAQPERRA
                     VRNEPPSRAPAGAAPSRRSTQPAAPAAAPAAPAPVVEKPKEDRSAQEKPATAAVPAPA
                     PKQEASPAVPPVPAPPPVEAAKLAKPEPAKTAEKAPEERPGPAGPVRIIEGVTPVLPQ
                     KQPAEGQAAND"
     gene            complement(586..1044)
                     /locus_tag="VHN20_14040"
     CDS             complement(586..1044)
                     /locus_tag="VHN20_14040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015928411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20 family protein"
                     /protein_id="HEX2726934.1"
                     /translation="MRQFDLSPFYRNTVGFDRLFSMLDQLGSFDSAPSYPPYNIERTD
                     ENAYRISVAVAGFTQDDLSIEVKENTLTIRGEKAPESEPKAEVLYQGIAARAFERRFQ
                     LADGVLVTGAALANGLLHLDLVREIPEAKKPRRIEIGGEAAKTIEARKAA"
     gene            1276..>1505
                     /locus_tag="VHN20_14045"
     CDS             1276..>1505
                     /locus_tag="VHN20_14045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015952710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX2726935.1"
                     /translation="MTQIETRDGIALRVARWRQTTRRVRDTVCILQGRAEFIERYFEV
                     ITELRRRGFAVVAFDWRGQGRSGREVDNPRKG"
BASE COUNT          250 a          522 c          531 g          202 t
ORIGIN      
        1 ggtgccgccg cgggcgcgcc gcccgctccc tccgttcgag gacgagacga tgcgtacgga
       61 gcgcgtccag ccccaacccg gcgacgagcc gacgcgggcc caacgcccgc aggcccagcc
      121 ggagcgcagg gccgtccgca acgagcctcc cagtcgcgcg cccgcaggcg ccgccccgtc
      181 ccggcgcagc acgcagccgg cagctccggc ggcggccccc gccgcaccgg cgccggtcgt
      241 cgaaaagccg aaggaggatc ggtcggcgca ggagaagccc gcgactgccg cggtcccggc
      301 gcctgcgccc aagcaggagg cgtcgccggc cgtgccgccc gtgccggccc cgccgccggt
      361 cgaggctgcc aagcttgcca agccggagcc agccaagacc gccgaaaagg cacccgagga
      421 gaggcccggg ccggccggcc cggtccggat catcgaaggt gtcacgccgg tcctgccgca
      481 gaagcagccg gcggaaggcc aggccgctaa cgactaagtt gccaatcagg cccgtacaag
      541 aaaaagcgcc ccggaaaccg gggcgctcgg cactcagggc gttcgttacg cggccttcct
      601 ggcctcgatg gtcttggcgg cctcaccgcc gatctcgatg cggcggggct tcttggcctc
      661 cgggatctcg cgcacgaggt cgagatgcag gagcccgttc gccagggccg cgccggtcac
      721 caggacgcca tcggcaagct ggaagcggcg ttcgaaagcc cgggcggcaa tgccctggta
      781 gagaacctcg gccttcggct cgctttcggg ggccttctcg ccccggatgg tcagcgtgtt
      841 ctccttcacc tcgatggaca ggtcgtcctg ggtgaagccg gcgaccgcca cggaaatccg
      901 gtaggcgttc tcgtcggtgc gctcgatgtt gtagggcggg taggacggcg cgctgtcgaa
      961 gctgccgagc tggtcgagca tcgaaaacag gcgatcgaag ccgacggtgt tgcggtagaa
     1021 gggcgaaaga tcaaactgtc gcatggcata tcctccgttg aagcgacatg caggcggtcc
     1081 gccgtgaggc cggacccggt acgcgccgcc gttaggccgg cgctcataaa agctgggtat
     1141 aaggaagccg ttgttcaagg ccgccgaacc ttgaaaggtt aacggtttgt aaccagatcg
     1201 gctcgtcctc ggcgcagggt tcccccggtg cagctcctcg aaactcccga caacccgatc
     1261 ccaaggcggc ctgtggtgac acagatcgag acccgtgacg ggatcgccct gcgcgtggcg
     1321 cgctggcgcc agacgacgcg ccgcgtgcgc gacacggtct gcatcctgca gggccgggcc
     1381 gagttcatcg aacgctattt cgaggtgatc acggaactgc gccggcgcgg cttcgcggtc
     1441 gtggcgttcg actggcgcgg ccagggccga tcggggcgcg aggtcgacaa tccgcgcaag
     1501 ggcca
//
LOCUS       DATAIQ010000856         2870 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_321537, whole genome shotgun sequence.
ACCESSION   DATAIQ010000856 DATAIQ010000000
VERSION     DATAIQ010000856.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2870)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2870)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2870
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_321537"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..701)
                     /locus_tag="VHN20_14050"
     CDS             complement(<1..701)
                     /locus_tag="VHN20_14050"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX2726936.1"
                     /translation="MVTTADARWILGARALRAFGDGYVAVLLPVHLALRGFDAFAIGA
                     ISTATLLGSAILTITLGLSAHRGARRPALFAASLLMLATGVSFAFAESFVPLLVIAFV
                     GTLNPSSGDVSVFLPLEHTMLAQAAADGDRTAVFARYSFIGSVVAAVGALAAGIVDWG
                     ESGEQRRMIVDAMFGLYGALGIATFLIYRNLSPAVEGDADKPAAPLGPSRRRVYGLAT
                     LFALDAFGGGFVVNSL"
     gene            931..2193
                     /locus_tag="VHN20_14055"
     CDS             931..2193
                     /locus_tag="VHN20_14055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-propeller fold lactonase family protein"
                     /protein_id="HEX2726937.1"
                     /translation="MPKGPFVFVSGRWDNVVSIVDVAAAMQPANNATPAAIVNQVRVT
                     PDIDSAGVVETASGQPVNLVIAADGRHAYVVNHSGRVTPAAAAAFQHGHPGTITVLDV
                     AKALDPASRGTTNAIVDIIDTGTAGPVGIALTPDQKHLVVSSAEAAGSEDGVDRITLI
                     DTASRKVVRQVKQALAGEGDGAPRPNPHAAPHAGYGRFPNANGVAVSPLDGGIIVTGN
                     GGTDDVSVISLARALKGEPAEMARVPVQTGPFGVAVSPDGRLAAVASRESMRTGIEGN
                     TISLIDLARATSDAGKAEMARVRVGTDRADEATRPFAVAFTRDGRSVLASCFRSNMIS
                     LVDVERALAGAPAERRLHVATSSGGPGRPRGVAMLPDGRHAAVIGGAKAGAGSSLVWI
                     IDLERLTPVGCVTGVGNGSYLLDVLPVA"
     gene            2317..>2870
                     /locus_tag="VHN20_14060"
     CDS             2317..>2870
                     /locus_tag="VHN20_14060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018388852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEX2726938.1"
                     /translation="MKLSRRELLASVATVACVDLPGEVFAQAEWKPTREVEFVIPFAV
                     GGGADLMARVIHKIITEEKLVPVPVALVNRPGGGGAVGIGYVAASRKADPHTLVLVNG
                     STQITPILNPSARTLTEVQPVMNVMLDDFVFFVKGDAPWKTAADFANDAKSKPPKTYA
                     FATGGTTDVMAVTILGKATGTELN"
BASE COUNT          491 a          966 c         1027 g          386 t
ORIGIN      
        1 agggaattga cgacgaagcc gccgccgaag gcgtcgagcg cgaacagcgt ggcgagcccg
       61 tagacgcgcc tccgcgacgg gccgagcggg gcggcgggct tgtcggcgtc gccttcgacg
      121 gcgggcgaca ggttccggta gatcaggaag gtggcgatgc cgagggcgcc gtagagcccg
      181 aacatggcat cgacgatcat gcggcgctgc tcgccgctct cgccccagtc gacgatgccg
      241 gcggcgagcg ccccgacggc cgcgaccacg gagccgatga agctgtagcg ggcgaacacc
      301 gccgtgcgat cgccgtcggc ggccgcctgc gccagcatgg tgtgctcgag cggcaggaaa
      361 acgctcacgt cgccgctcga cgggttcagc gtgcccacga acgcgatcac caggagcggc
      421 acgaaggatt cggcgaaggc gaagctgacg ccggtggcca gcatcagaag gctggcggcg
      481 aagagggcag ggcggcgcgc gccgcggtgc gcggacagcc cgagcgtgat cgtcaggatc
      541 gcggagccga gcagggtcgc ggtcgagatt gcgccgatgg cgaaggcgtc gaagccgcgc
      601 aaggccagat gcaccggcag cagcaccgcc acgtagccgt cgccaaaggc ccgcagcgcg
      661 cgggccccca ggatccagcg cgcatccgca gtcgtcacca tcaatgcccc cgtgtcggct
      721 ccaaacctcc ctcatttgtc attgccggac ttgaccctgc aatccacacc gccgctaatc
      781 gcgcccgcct cgtcggcagg acgacgcacg gatcatgttc gtgccggtct cgcctggaca
      841 ggcgggggtc acaaagcggg gcaatgccaa ctacaggcaa ctgcgggtct ggatgatcgg
      901 gcaggagccg gccgggggag ggaaatcatc gtgccaaagg ggccgtttgt gttcgtcagc
      961 ggacgttggg acaacgtcgt gtcgatcgtc gacgtggctg ccgccatgca gccggccaac
     1021 aacgccacgc cggcggcgat cgtgaaccag gtgcgcgtca cgcccgacat cgacagcgcg
     1081 ggcgtcgtcg aaaccgcgag cgggcaaccc gtcaacctcg tgatcgccgc ggacggccgg
     1141 cacgcctacg tggtcaacca ttcggggcgg gtgacgccgg cggcggcggc agccttccag
     1201 cacggccatc cgggcaccat cacggtgctc gacgtcgcca aggcgctcga tcccgccagc
     1261 cgcggcacga ccaacgccat cgtcgacatc atcgacacgg ggaccgccgg cccggtcggc
     1321 atcgcgctga cgcctgatca gaagcacctc gtcgtctcgt ccgccgaagc cgcaggttcc
     1381 gaggacggcg tcgatcgcat cacgctgatc gacacggcgt cgcgaaaggt ggtgcggcag
     1441 gtcaagcagg cgctggcggg cgagggtgat ggcgcgcctc ggccgaaccc gcacgccgcg
     1501 ccgcatgcgg gctacgggcg atttccgaat gcgaacggcg tcgccgtgag cccgctcgac
     1561 ggcggcatca tcgtcaccgg caacggcggc acggacgacg tctcggtgat cagcctggcg
     1621 cgcgccttga aaggcgagcc cgccgagatg gcgcgcgtcc ctgtgcagac agggccgttc
     1681 ggcgtcgcgg tgagccccga cggccgtctc gccgccgtgg cgagccgcga gagcatgcgc
     1741 accggcatcg agggcaacac gatctcgctg atcgatctcg cgcgcgcgac cagcgacgcc
     1801 ggcaaggccg agatggcgcg cgtgcgcgtc ggaacggatc gggcggacga ggcgacacgg
     1861 cccttcgcgg tcgccttcac gcgcgacggc aggagcgtgc tggcgagctg ctttcgcagc
     1921 aacatgatct cgctggtcga cgtcgagcgg gcgctcgccg gtgcgccggc ggagcggcgc
     1981 ctgcatgtgg cgacttcgag cggcggcccc ggcaggccgc gcggcgtcgc catgctgccc
     2041 gacggccgcc acgcggcggt gatcggcggt gccaaggcgg gggcgggcag cagcctcgtc
     2101 tggatcatcg acctcgagcg cctgacgcct gtgggctgcg tcaccggcgt cggcaacggg
     2161 tcttacctgc tcgacgtgct gcccgtcgcg tgatgccgga ggcggccgaa ggccaacgaa
     2221 aacgtgtcgt atcgggtcgg ggccgccgtt gacgcacttc ggtccgcgtc tatgatctcc
     2281 caaaataaaa aaccgaagaa cacttgggag gaacagatga aattatcccg gcgggagttg
     2341 ctggccagtg ttgcaaccgt tgcttgcgtc gatcttccgg gcgaagtctt tgcgcaggcc
     2401 gagtggaagc cgacgcgcga agtcgagttc gtgatcccgt tcgcggtcgg cggcggcgcc
     2461 gacctgatgg cgcgcgtgat ccacaagatc atcaccgagg agaagctcgt gccggtgccg
     2521 gtggcgctgg tgaaccgtcc cggcggcggc ggcgccgtcg gcatcggcta cgtggccgcg
     2581 agccgcaagg ccgatccgca tacgctcgtt ctcgtcaacg gctcgacgca gatcacgccg
     2641 atcctcaatc cgagcgcgcg cacgctgacc gaggtgcagc cggtcatgaa cgtgatgctc
     2701 gacgacttcg tgttcttcgt gaagggcgac gcgccctgga agaccgccgc cgatttcgcc
     2761 aacgacgcca agtcgaaacc gccgaagaca tatgcattcg cgaccggcgg cacgaccgac
     2821 gtgatggccg tgaccatcct cggcaaggcg accgggaccg agctgaacat
//
LOCUS       DATAIQ010000857         1866 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_137147, whole genome shotgun sequence.
ACCESSION   DATAIQ010000857 DATAIQ010000000
VERSION     DATAIQ010000857.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1866)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1866)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1866
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_137147"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1545)
                     /locus_tag="VHN20_14065"
     CDS             complement(<1..1545)
                     /locus_tag="VHN20_14065"
                     /inference="COORDINATES: protein motif:HMM:NF019219.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1549 domain-containing protein"
                     /protein_id="HEX2726939.1"
                     /translation="MWKLLLPAAFAAAALAQTADFVRDVQPVLTARCLACHSGEGAQA
                     GLKIHTRDELLAGGKSGPAIVPGKADASLLVERIEGRKGMRMPPSGPPLEPAEIDRIR
                     QWIDQGARFEGRATPVAGRVAPLAPRMPPVPAGAAANPIDRFIDSYLAQKKLPAPPLV
                     SDALFARRVWLDLHGLPPPPEALAAFLASHDKDKRTRLIDRLLAERKPYAEHWISFWN
                     DLLRNDEGVIYHGERKSISTWLLGALEQNVPYDAMVRALLDPPAKTGPEGFLVGVTWR
                     GVVSASQVPPMQAAQNAAQVFLGINLKCAACHDSFINRWKLRDTYGLAGLFSEEPLEL
                     ARCDVKLGGHETARFLYSDFGVKFDDSAAARRKAAADWFVHRENGRFSRTLVNRYWRQ
                     LFGRGIVEPPDDMDGPPWSEDLLDWLASDFSAHGYDLRHLLRQITTSRAYQSEAVREV
                     GESRDYVFRGPRLRRLSAEQFSDTISAVTGDWRLHSPRTENFATYSREWRLKSDPLSR
                     ALGRPIR"
BASE COUNT          321 a          589 c          643 g          313 t
ORIGIN      
        1 gcggatggga cgtccgagcg cccggctgag cgggtctgat ttcaagcgcc attcgcggct
       61 gtaggtcgcg aaattttcgg tgcgggggct gtgcagccgc cagtcaccgg tcaccgcgga
      121 aatagtgtcg gagaactgct ccgcgctcaa ccggcgcagg cgggggccgc gaaacacgta
      181 atccctgctc tcgcccacct cgcgcactgc ctccgactgg taggcacgcg acgtcgtgat
      241 ctgccgcagc aggtgcctga ggtcatagcc gtgtgcggag aagtcggacg cgagccagtc
      301 gagcagatcc tcgctccagg ggggaccatc catatcgtcc ggcggctcga cgatgccgcg
      361 tccaaagagc tgacgccagt agcggtttac cagcgtgcgg gaaaagcggc cattctcacg
      421 atgcacgaac cagtcggcgg cggccttgcg gcgcgcggcc gcgctgtcgt cgaacttcac
      481 gccgaagtcg gagtagagaa aacgcgccgt ctcgtggccg ccgagtttca cgtcgcaccg
      541 cgccaattcg agaggctctt ccgagaagag gccggcgagc ccgtaggtat cgcgcagctt
      601 ccagcgattg atgaagctgt cgtggcaggc cgcacatttc agattgatgc cgaggaagac
      661 ttgggcggcg ttctgcgccg cctgcatcgg gggcacctgg ctcgcgctca ccacgccccg
      721 ccacgtcacg ccgaccagaa agccttcagg gcccgtcttc gcgggaggat cgagcagcgc
      781 ccgcaccatc gcgtcgtatg ggacgttctg ctcgagcgcg cccaggagcc acgtggagat
      841 cgacttgcgc tcgccgtgat agatgactcc ctcgtcgttg cgcagcagat cgttccagaa
      901 gctgatccaa tgctccgcat acggcttacg ctcggcgagc aggcggtcga tcaggcgcgt
      961 gcgcttgtcc ttgtcgtgcg atgcgaggaa ggcggcgagc gcttcgggcg gcggcggcag
     1021 accgtgaagg tcgagccaga cacgccgggc gaacagggca tcggagacaa ggggcggagc
     1081 cggcaacttc ttttgcgcca ggtacgagtc gatgaagcga tcgatcggat tcgcggcggc
     1141 gccggcaggt accggcggca tgcgtggcgc gagcggggcg actcgaccgg caacgggcgt
     1201 ggcccggccc tcgaatctgg cgccctggtc gatccactgc cggatgcgat cgatctcggc
     1261 gggctcgagg ggaggtcctg aaggcggcat acgcattccc ttgcgtccct cgatacgttc
     1321 gaccaggagg ctcgcatccg ccttgccggg gacgattgcc ggaccactct tgccgcccgc
     1381 cagcaactcg tcgcgggtgt gaatcttcag gcccgcctgg gcgccctctc ccgagtggca
     1441 ggcgaggcag cgcgctgtga gcacaggctg cacgtcgcga acgaaatccg cggtctgtgc
     1501 caaagccgcg gcggcgaagg cggcggggag aagcagtttc cacatagaat cggagccggc
     1561 agtccggagt gtatcaagag cgggtccgga gttctgtgct acatttccgg aacacggcat
     1621 gaagcgtgcg gtctttgtcc tgttcctggg aagcctgctc gggccctcgg cttgggcgca
     1681 aggctgagtc gcggcacggc tgggtacacc cgtgctcagc gctctctgcg gtcgcaggga
     1741 ttatgcccgc aagtggaact ttgctgcagg ttaccgcttc cagccgtcgt cgcgccatta
     1801 cgtcgggacc gttgagcaga cgcagcgcga acggctgggc aaccagatcc agaatacgta
     1861 tcacct
//
LOCUS       DATAIQ010000858         2245 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_459492, whole genome shotgun sequence.
ACCESSION   DATAIQ010000858 DATAIQ010000000
VERSION     DATAIQ010000858.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2245)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2245)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2245
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_459492"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..891)
                     /locus_tag="VHN20_14070"
     CDS             complement(<1..891)
                     /locus_tag="VHN20_14070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013500972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEX2726940.1"
                     /translation="MDASQGAAPRASLTVADGVAIMVGIVVGVGIFKMPPLVAANVPS
                     DGAFIAVWLLGGLVTLIGALSYAELAAAYPSAGGEYHFLFRAYGRSVAVLFAWARGTV
                     IQTGAIALVAFVFGDYAAQLVPLGPYGPAIYAALAVVILSGINLLGTPQGARTQNIFT
                     ILTVVTLLVVIATGLAVTVNGAPAPAPAATSGASGAIGLAMVFVLLTYGGWNEAAYLS
                     AEMRDVGRNMVRVLVFGTLVLVVLYALMNYAYLHAFGLHGLRASDAPAADLMRRAGGD
                     WGAAVLSLTVCCAALSTLNGT"
     gene            complement(949..1824)
                     /locus_tag="VHN20_14075"
     CDS             complement(949..1824)
                     /locus_tag="VHN20_14075"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF018076.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX2726941.1"
                     /translation="MQHLTMPRSRRFAAPLAAPLVAAWCVLSPAAMAQSAQPAQAQEQ
                     PKLDVIYVPTPQEVVDRMLEMAQVRADDFVIDLGCGDGRMPVTAAKVYGARGFGVDID
                     PARIKEAKENAEKAGVADKVDFRVANLFETKISDATVMTMYLLSTINLKLRPRILDEL
                     RPGTRIVSHAFDMGDWEPDDRDTIGYRNVYFWLVPAKVEGRWNLRTGDGQTIALDLKQ
                     RFQKVDGTATVNGRAVPLRDARLRGADISFVVDAGDGRATTFTGRVDGGSMRATEAGA
                     SAAGGRAKDWQATRT"
BASE COUNT          382 a          729 c          802 g          332 t
ORIGIN      
        1 cgtgccgtta agcgtgctga gcgcggcgca gcagaccgtg aggctgagca cggccgcgcc
       61 ccagtcgccg ccggcccggc gcatcaggtc ggcggcgggc gcatcggacg cgcgcaggcc
      121 gtgaagcccg aaggcgtgca ggtaggcata attcatcaac gcatagagaa ccacgagcac
      181 aagcgtgccg aagaccagga cacgcaccat gttgcggccg acgtcgcgca tctccgcgga
      241 gagataggcg gcttcgttcc aaccgccgta ggtgaggagc acgaagacca tggcgaggcc
      301 gatggcgccg cttgcacccg acgtcgctgc cggcgccggc gccggcgcgc cgttgacggt
      361 cacggccaac cccgtggcga tgaccacgag gagcgtgacg acggtcagga tcgtgaagat
      421 gttctgggtg cgagcaccct gcggcgtgcc gagaaggttg atgccggaca ggatcaccac
      481 cgccagggcg gcgtagatag ccgggccata ggggccgagc ggcaccagct gggcggcgta
      541 atcgccgaac acgaaagcga cgagcgcgat cgcgccggtc tggatgacgg ttccgcgcgc
      601 ccaggcgaac agcacggcga ccgagcggcc gtaggcgcgg aacaggaaat ggtattcgcc
      661 gccggcgctc ggatacgccg ccgccagctc ggcgtagctg agcgcgccga tcagcgtcac
      721 cagcccgcca agcagccaga cggcgatgaa agcgccatcg ctgggcacgt tggctgccac
      781 gagcggcggc atcttgaaga tgccgacgcc aacgacgatg ccgaccatga tggcaacgcc
      841 atcggcaacc gtgaggctcg ctcgcggcgc ggcgccttga gatgcatcca tgaagacctc
      901 gtgtgggtag atgggaggcg gcgggcgggc tcgtcttacc gctctagctc acgtgcgggt
      961 cgcctgccag tccttggccc gtccgccggc cgcggatgcg cccgcttcgg tggcgcgcat
     1021 ggacccgccg tcgacgcggc cggtgaaagt ggtcgcgcgc ccgtcgccag cgtcgacgac
     1081 gaagctgata tcggcgccac gcaggcgcgc gtcgcgcaac ggcacggccc ggccgttcac
     1141 ggtcgccgtt ccatcgacct tctggaaacg ctgcttgagg tcgagcgcga tggtctggcc
     1201 gtcgccggtg cggaggttcc agcgcccctc gactttcgcc ggaacgagcc agaagtagac
     1261 gttgcgataa ccgatggtgt cgcggtcatc gggctcccag tcgcccatgt cgaaggcgtg
     1321 cgagacgatc cgggtgccgg ggcgcagctc gtccaggatg cgcggcctga gcttgaggtt
     1381 gatcgtcgac aacaggtaca tggtcatgac cgtggcgtcg ctgatcttgg tctcgaacag
     1441 gttggcgaca cggaagtcga ccttgtcggc gacgcccgct ttttcggcgt tctccttggc
     1501 ctccttgatg cgagcgggat cgatgtcgac gccgaacccg cgcgcgccat agacctttgc
     1561 ggccgtcacc ggcatgcgtc cgtcgccgca gccgagatcg atcacgaaat cgtcggcccg
     1621 cacctgcgcc atttccaaca tccggtcgac gacctcctgg ggggtcggca cgtagatgac
     1681 gtcgagcttg ggctgctcct gcgcttgtgc cggctgagcg gactgggcca tggcggcggg
     1741 cgagaggacg caccacgcgg cgacaagggg ggcggccaaa ggggcggcga agcggcggga
     1801 gcggggcatg gtgaggtgct gcacgtgtga tcctcgcgat gtagtgaaca acgacggaag
     1861 aactggcgtc cgaccattca cggggccagc gtccgaggcg acccctggtg cgctgcgcgg
     1921 ccgtcttaac cctcagcttt caacagagtt ttcccattgt aaccggctaa ctcgatcggc
     1981 tctcgatcat ttgaaccggc gccgagcggg cccggcggcc gccatcattg ccgccggacg
     2041 gcggcggtca agagcccacc agcggcaagg aacctcgggc ccccgggctc gcctcgggcg
     2101 ccgacgctgg gggcggcccg gtcatgcggg tggagtgggg cggccgcgcg tttcgggttg
     2161 cgcccccacg ggcgcttgcc tttaatggcg cacccaagga gagacataat gcctaaaaca
     2221 acaggtctga tggcgggact ggcct
//
LOCUS       DATAIQ010000859         1510 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_66237, whole genome shotgun sequence.
ACCESSION   DATAIQ010000859 DATAIQ010000000
VERSION     DATAIQ010000859.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1510)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1510)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1510
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_66237"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1352
                     /locus_tag="VHN20_14080"
     CDS             <1..1352
                     /locus_tag="VHN20_14080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012113377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEX2726942.1"
                     /translation="VFEKIARGRAADVDLAVAAARRALHGPWGRMTATERGRIMQRLG
                     QLILEHGEELAQVEARDTGKPMSVARADAKAVARYFEFYGGAADKVHGQTIPYLNGYN
                     VSVVRIPHGVTAHIIPWNYPAQMMWRTLAPALAMGNAAVVKPSEDACLSALKLAELAM
                     LAGLPPGALNIVTGYGTEAGAALTAHPDINFATFTGSPEVGAQVQQSTARHHVPCVLE
                     LGGKSPQIVFDDADLAKAAPIIVRALVQNAGQTCSAGSRLLVQEGIYDRFVSTIAASF
                     EALKVGAPEMDLDCGPLINARHHQRVNAFIADAVAMGVPKLAEGSLAPGISGEGFFVK
                     PVLFGPVPRNHRLACQEVFGPVLSVMPFKDEDDAVQLANATEYGLVAGIWTENGSRQA
                     RMAQRIASGQVFINCYGAGGGVELPFGGVKKSGYGREKGLLALEEMSTTKTIVQHYE"
     gene            1364..>1510
                     /locus_tag="VHN20_14085"
     CDS             1364..>1510
                     /locus_tag="VHN20_14085"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX2726943.1"
                     /translation="MSRLSNKIAIVTGAGSGFGAAIARAYIKENAKVILADVNLEAAR
                     GIAAE"
BASE COUNT          278 a          488 c          508 g          236 t
ORIGIN      
        1 aggtgtttga aaaaattgcg agaggccggg ctgcggatgt cgacctcgcg gtggctgcgg
       61 cgcgccgcgc gctgcatgga ccctgggggc gcatgaccgc cacggagcgc ggacgcatca
      121 tgcagcgtct ggggcagctc atcctggaac acggcgagga actggcgcag gtggaagccc
      181 gcgataccgg caagcccatg tccgtggccc gcgcggacgc caaggcggtg gcacgttatt
      241 tcgagttcta cggcggtgcg gccgataagg tgcacggcca gaccattccc tacctgaatg
      301 gctacaacgt gagcgtcgtg cgcattcccc acggcgtcac ggcccacatc attccgtgga
      361 actaccccgc gcagatgatg tggcgcacgc tcgcccccgc gctggccatg ggcaacgcgg
      421 cggtggtcaa accctccgag gacgcgtgcc tgagcgcctt gaagctcgcc gaactggcca
      481 tgctcgcggg gttgccaccg ggtgcgctga acattgtgac cggctatggc accgaggccg
      541 gtgcggcgct gacggcgcac ccggacatca acttcgcgac gttcacgggc tcgcccgagg
      601 tcggcgcgca ggtgcagcaa tccaccgcgc gccaccatgt gccctgtgtg ctcgaactcg
      661 ggggaaaatc gccccagatc gttttcgatg atgccgacct agccaaggcc gcgcccatca
      721 tcgtgcgggc cctggtccag aacgccggcc agacctgctc cgccggcagc cgcctgctcg
      781 tgcaggaagg catctacgac cgcttcgtct cgacgatcgc cgccagcttc gaggcgctga
      841 aggtcggggc gccggagatg gacctcgact gcggtccgtt gatcaacgcc cggcaccacc
      901 agcgcgtgaa cgccttcatc gccgacgccg tcgccatggg tgtgcccaaa ttggccgaag
      961 gcagcctggc gcccgggatt tccggcgaag gcttcttcgt caaacccgtg ctgttcggcc
     1021 cggtgccgcg caatcaccgc ctggcatgcc aggaagtgtt cggcccggtg ctgtcggtca
     1081 tgccgttcaa ggacgaggac gacgcggtgc aactggccaa tgccacggag tacggcctcg
     1141 tcgcaggcat ctggacggag aacggcagcc gccaggcgcg catggcgcag cgcatcgcaa
     1201 gcggacaggt ttttatcaat tgctacggcg cgggcggggg tgtcgagctg ccgttcggcg
     1261 gcgtcaagaa aagcggttat ggccgcgaga aagggctgct cgctctggaa gagatgagca
     1321 ccaccaagac cattgttcag cactacgaat aaggaagaca accatgtcca gattgagcaa
     1381 caagatcgcg atcgtcaccg gcgccggcag cggattcggc gcagcgatcg cgcgggccta
     1441 catcaaggag aacgcgaagg tgattcttgc ggacgtcaac ctcgaagcgg cgcgcgggat
     1501 cgccgctgaa
//
LOCUS       DATAIQ010000860         6168 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_414110, whole genome shotgun sequence.
ACCESSION   DATAIQ010000860 DATAIQ010000000
VERSION     DATAIQ010000860.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 6168)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6168)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6168
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_414110"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1437)
                     /locus_tag="VHN20_14090"
     CDS             complement(<1..1437)
                     /locus_tag="VHN20_14090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014494468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="von Willebrand factor type A domain-containing
                     protein"
                     /protein_id="HEX2726944.1"
                     /translation="MSDDQLKVLLPDPPSPSPEAKRGAVDAALARFDETFPSRDAQAS
                     DAGVRLTERTGAVPRRNHGTDAMTRTKRIGRTQGIAASLFLTAGLIGAGTYVFQQQGE
                     HRTPALNRASGEAHVVQSPHVSARHDEIALPKGSAPAPSPPASRPADGRVRAAKEREV
                     LRVETRQAVPSEAAPVSAPPRIMAGADTGRALPPLPERPPVAAEPHGRDQFAGEAENP
                     FKVVREHPVSTFSADVDTASYSFVRASLNRNTLPAKAAVRTEELVNYFPYAYPAPSDA
                     RESFRTTVSVFPSPWNEGRRIVHIGIKGYAVQPAERPRANLVFLIDTSGSMNAPNRLP
                     LAKQALAMLVDQLDARDSVAIVTYAGSAGTALEPTPASQKAKILAAIERLESGGSTAG
                     AEGIRQAYALAEASFDANGVNRVLLATDGDFNVGITSRDELKGFVERKREKGIFLSVL
                     GFGMGNYNDALMQALAQNGNGTAAYIDTL"
     gene            complement(1427..1981)
                     /locus_tag="VHN20_14095"
     CDS             complement(1427..1981)
                     /locus_tag="VHN20_14095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014494466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HEX2726945.1"
                     /translation="MNAAMDPDAELVSRAIAGDRASFGALLERHYERMHRIAWRLTGS
                     AHDAEDIVQDVCCALVGRIRFFRGEAKFATWLIGIVVNACRDHRRRAGAFGRMRERLS
                     VVVGLGPGPDGRDLFRATWLASEISRLSPDVRAAVVLVAGEGLSHAEAAKILGCAEST
                     VSWRLHEARKRLKAEAVDEVLDVR"
     gene            complement(2158..3462)
                     /locus_tag="VHN20_14100"
     CDS             complement(2158..3462)
                     /locus_tag="VHN20_14100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726946.1"
                     /translation="MLNTDPRGGFAADDAGVLLTIGGRFTNEPSGISMLGSSQDWQSR
                     LFAQIDGSAPEPLVPALQEALDFPQAVFWSRILDGFVVSSQRGGPVIESRTSLLRRSG
                     EVKALRPHGGVTLVEDLPRLGVAALLDAGFLAFVDRDGRVADVARLNSGDDPYGSHEV
                     YETRDEGWLYVRGAQSDHAVHVGNADGAWRATRILRIVEEDGRFGGLVRTLVGLRDAQ
                     AGRGPPDIVRAGSCRRFSTVVQRMIFCDATDGVMREMRAGEIAAIEGRGTHLTEFIGD
                     ADGLGAALFRDWAGRVYAYDGMRLHAVAGAAIGARGVVQNVKHSRRTFISTSGAVFEI
                     KGNAPDKLEIVQLEAPQGSASALIRFVDAADETFAFLRDGIYLVGRERLERRWVAREA
                     IDVTGPTIPTEVPGWGGTLFATQAQDGSRRFHLLASCLLTSQ"
     gene            complement(3933..>6168)
                     /locus_tag="VHN20_14105"
     CDS             complement(3933..>6168)
                     /locus_tag="VHN20_14105"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEX2726947.1"
                     /translation="WLELPIAAIAALLALANLVAAYITLRLLSRLVLKAVARAILRFV
                     YRVEARGIENFGRAGARRIVVANHQSFLDGLVLAAFMPGDPVFAVNTEIAKRWWARPL
                     LSLVDFAALDPTKPMALKSLAHAVEKGRPVVIFPEGRLTVTGSLMKVYDGPAMVADKT
                     GADLIPVRLDGTQHTPFTRLKGRVAKRFAPQIRVTAMPPRRLDVDPSLKGRLRRKAAG
                     QALYELMSETLFATTNIDETLFRSLIKAARLNGLRRTIVEDVDFSPLSYLRVLTGAFV
                     LGDKLKPLTREGEAVGVLLPNSAGAVVTFFALQAIGRVPAMLNVSSGARRMVSACRTA
                     EVRTVLCSRRFVERGKLQALLAEMEAAVDVVYLEDVKAQVGRLDKISGLVRALGAGAF
                     YSDGDANAPAVIMFTSGSEGAPKGVVLSHRNINANRHQVGARIAFNAQDIVFNALPMF
                     HSFGLTVGTLLPILAGIRTFLYPSPLHYRIVPELVYQTNATVFFGTDTFLRGYARMAN
                     PYDFHSVRIVGAGAERVSEETRRLWNDLFGIRILEGYGATETAPVVAFNTPMHFRAGT
                     VGRLMPAITHRLEPVPGIAEGGRLSVKGPNVMLGYLLESAPGEIQPVADGWYDTGDIV
                     AIDADGYVRIQGRAKRFAKIAGEMVSLGAVEALAAEASPSFRHAAVSRPDLRKGEQVV
                     LVSEDPGLTRQRYLEVAGAKGTPEIMIPREVIYLEKLPVLGTGKTDYPALEELVRKPV
                     QEVA"
BASE COUNT          955 a         2091 c         2195 g          927 t
ORIGIN      
        1 gagcgtgtcg atgtaggcgg cggtgccgtt gccgttctgc gccagggcct gcatcagggc
       61 gtcgttgtag ttgcccatgc cgaagccgag cacggacagg aaaatgcctt tctcacgctt
      121 gcgctcgaca aatcccttga gctcgtcgcg cgaggtgatg ccgacattga agtcgccgtc
      181 ggtggcgagc aggacgcggt tcacgccgtt cgcgtcgaag ctcgcctccg ccagagcgta
      241 ggcttggcgg atgccttccg cgcccgccgt cgagccgccc gactcgagcc gctcgattgc
      301 cgccaggatc ttggccttct gcgacgccgg cgtcggttcg agcgccgtgc ccgcgctgcc
      361 ggcgtaggtg acgatcgcca cgctgtcgcg ggcgtccagc tggtcgacca gcatggcgag
      421 cgcctgcttg gcgagcggca gccggttcgg cgcgttcatc gagccggacg tgtcgatcag
      481 gaacacgagg tttgcgcgcg gccgctcggc cggctgcacc gcatagcctt tgattccgat
      541 atgcacgatg cggcggccct cgttccacgg gctcgggaac accgacacgg tcgtgcggaa
      601 cgactcgcgc gcatcgctgg gggccgggta ggcataagga aaatagttga cgagctcctc
      661 ggtgcgcacc gccgccttgg ccggcagcgt gttgcggttg agcgaggcgc gcacgaagga
      721 atacgacgcc gtgtccacgt ccgccgagaa tgtcgagacc ggatgctcac gcaccacctt
      781 gaacggattc tcggcctcgc cggcgaactg atcgcggcca tgcggctcgg ccgcgacggg
      841 cggccgttcc ggcaagggcg gcagtgcccg gcccgtgtcc gcgcccgcca tgatccgggg
      901 cggggcggat accggcgcag cctcgctcgg gaccgcctgg cgcgtctcga cgcgcaacac
      961 ctcgcgctcc ttcgccgccc gaacccgccc gtcggcgggc cggctcgcag gcggggatgg
     1021 ggccggtgcg ctgcccttcg gaagagcgat ctcgtcgtgc cgcgcggaga cgtgcgggct
     1081 ctgcacgacg tgcgcttcgc ctgacgcccg gttcagggcc ggcgtgcggt gctcgccctg
     1141 ctgctggaag acgtaggtcc ctgcgccgat gagccccgcg gtcagaaaca agctcgcggc
     1201 gatgccctgt gtgcgaccga tccgtttcgt ccgagtcatg gcgtctgtcc catggttgcg
     1261 gcggggaaca gcccccgtcc gctccgtgag acgcacgccg gcatcggaag cttgggcgtc
     1321 gcgcgacggg aaggtttcgt cgaagcgcgc gagcgccgcg tccaccgcgc cccgcttcgc
     1381 ttccggcgaa ggggagggcg ggtcgggcag aagcaccttc agctgatcat cggacatcga
     1441 gaacctcatc gaccgcttcg gccttgaggc gcttgcgcgc ctcgtgcagc cgccacgaca
     1501 ccgtggattc ggcgcagccg agaattttcg ccgcttcggc gtggctcaga ccttcccccg
     1561 ccacgaggac gaccgcggcg cgcacgtccg gcgagaggcg ggagatctcg ctcgcgagcc
     1621 acgtggccct gaacaggtcg cgaccgtcgg ggcccgggcc gaggccgacg acgacgctga
     1681 gccgctcgcg catgcggccg aaagcgccgg cgcggcggcg atggtcgcgg caggcgttga
     1741 cgacgatgcc gatcagccag gtcgcgaact tcgcctcgcc gcgaaagaag cggatcctgc
     1801 cgaccagggc gcagcagacg tcctggacga tgtcctccgc gtcatgggcc gagccggtca
     1861 gccgccaggc gatgcggtgc atgcgctcgt aatgccgttc gagcagcgcg ccgaaggatg
     1921 cgcggtcgcc cgcgatcgcc cgggagacaa gctccgcgtc cgggtccatc gcggcgttca
     1981 cgggcgcacg gcgtcccgcc gcaaggtccg acgtggggtc tgtcgcatgg ctcggtctcc
     2041 gccctcgtca cttaagacgc agggacatgg cggatccttg gaggtctgga aaaaaacttt
     2101 tccgcaggcc tcggccgcgt cgccatgagc tggtggcagc ccgccgaagg ccggcgttca
     2161 ctggctcgtc agcaggcacg acgcgagaag gtgaaagcgg cggctgccgt cctgtgcctg
     2221 cgtcgcgaac agcgttccac cccagccggg cacctcggtc gggatggtgg ggccggtgac
     2281 gtcgatagcc tcgcgcgcga cccagcggcg ctccagtcgc tcacggccga cgaggtagat
     2341 tccgtcgcgc aggaaagcga atgtctcgtc cgccgcgtcg acgaagcgga tcagggccga
     2401 cgcgctgcct tgcggagcct cgagctgcac gatctcgagc ttgtcggggg cgtttccctt
     2461 gatctcgaac acggcgccgg aggtcgagat gaacgtgcgc ctactgtgct tcacgttctg
     2521 cactacgccc cgcgccccaa tggcggcgcc cgcgacggcg tgcaggcgca tcccgtcata
     2581 ggcgtaaacg cgaccggccc agtcgcggaa cagcgcggcg ccgagcccat cggcatcgcc
     2641 gatgaactca gtcaggtgcg tgccgcggcc ttcgatggcg gcgatctcgc cggcacgcat
     2701 ctcgcgcatc acgccgtccg tggcatcgca gaagatcatt cgctgcacga ccgtgctgaa
     2761 gcgccggcaa cttccggcgc gtacgatgtc cggcgggccg cgcccggcct gtgcgtcgcg
     2821 caggccgacg agcgtgcgca caagcccgcc gaagcgcccg tcctcctcga cgatgcgcag
     2881 gatgcgggtg gcgcgccacg cgccgtctgc gttgcccaca tggacggcgt gatcggattg
     2941 cgctcccctt acgtaaagcc agccctcgtc gcgcgtctcg tagacctcgt gagatccata
     3001 ggggtcgtcg cccgagttga gccgcgccac gtcggcgacg cgcccgtcgc ggtcgacgaa
     3061 cgcgaggaag ccggcgtcga gaagggcggc gacgccgagg cggggaaggt cctcgaccag
     3121 cgtcaccccg ccgtgcggcc ggagcgcctt cacctcgccg ctgcggcgca gcaggctcgt
     3181 gcgcgattcg atcacggggc cgccgcgttg cgacgacacc acgaagccgt caaggatgcg
     3241 gctccagaac accgcctgag ggaagtcgag cgcctcctgc aaggccggca cgaggggctc
     3301 cggcgccgat ccgtcgatct gcgcgaatag gcggctctgc cagtcttgcg acgagccgag
     3361 catgctgatg ccgcttggct cgtttgtgaa gcgcccgccg attgtcagca gcacgccggc
     3421 atcgtccgcc gcgaagccgc cgcgcggatc ggtattgagc acgaaaccgg tttcgtgtgg
     3481 cccggccagc tctcgcggcc cgcggctcca cacgggggtg cgggtttcgc gggcgccgtt
     3541 cggcgccgct acggaacgca gcgcgtggac gagcggaaac ggagccgatg gcgggcgatc
     3601 gacgtgaccg ggagcaacgt ccctgccgtc gagcaggagc gggtcgccgc gcggcccagc
     3661 ctcctggccg ggcggaacga tcgggatttc ctggaggcac gatcccgagg cggaggccgg
     3721 ggtgggccag ctggcgccaa ggagggacag cccggcgccg aagagggcac cccgaacgat
     3781 gttaagattt cgttgcacgc atgcacgacg ttttgtcccg ccaggaccag gctacgactg
     3841 ccgcatgaac aaggtgttca tcgaaccgtc gccgcacgcg gcaggacggc tcgccgaggc
     3901 ggagcctcga ctcatggtga acgagtcgct gctcaggcga cctcctggac gggcttgcgg
     3961 accagttcct cgagggcggg gtagtcggtc ttgcccgtgc cgaggaccgg cagcttctcg
     4021 aggtagatga cctcgcgcgg gatcatgatc tccggtgtgc ccttggcgcc ggcgacctcg
     4081 aggtagcgct ggcgggtgag gcccggatct tcgctcacga gcacgacctg ctcgcccttg
     4141 cgcaggtcgg ggcgcgagac ggcggcgtgc cggaagctgg gcgacgcctc ggcggcgagg
     4201 gcctcgacgg cgccgagcga gaccatctcg ccggcgatct tggcgaagcg cttggcacgg
     4261 ccctggatgc gcacgtagcc gtccgcatcg atggccacga tgtcgccggt gtcgtaccag
     4321 ccgtcggcga cgggctggat ctcgcccggc gccgactcga gcagatagcc gagcatcacg
     4381 tttgggccct tgacgctgag gcgtccgcct tcggcgatgc cggggacggg ctcgaggcga
     4441 tgcgtgatcg ccggcatcag gcgcccgacc gtgccggcgc ggaaatgcat cggcgtgttg
     4501 aacgcgacca ctggcgccgt ttcggtggcg ccgtagcctt cgaggatgcg gatgccgaac
     4561 aggtcgttcc acagccgccg ggtctcctcc gagacgcgct cggcgccggc gccgacgatg
     4621 cgcacggaat ggaagtcgta cgggttcgcc atcctggcgt agccgcgcag gaacgtgtcg
     4681 gtgccgaaga acaccgtcgc gttcgtctgg tagacgagtt cgggcacgat gcgatagtgc
     4741 agcggcgacg gatagaggaa cgtcctgatc cccgcgagga tcggcagcag cgtgccgacc
     4801 gtcagcccga aggagtggaa catcggcagc gcgttgaaca cgatgtcctg cgcgttgaag
     4861 gcgatgcgcg cgccgacctg atgtcggttg gcgttgatgt tccggtgcga gagcacgacg
     4921 cctttgggcg ccccctccga tccggacgtg aacatgatca ccgcgggcgc gtttgcgtcg
     4981 ccatcgctgt agaacgcgcc ggcgccgagc gcgcgcacca gccccgaaat cttgtcgaga
     5041 cggccgacct gcgctttgac gtcctcgaga tagacgacat cgacggccgc ctccatctcg
     5101 gcgagcaggg cctgcagctt gccgcgctcg acgaagcggc gcgagcagag cacggtgcgc
     5161 acctcggccg tgcggcacgc cgagaccatg cgtcgcgcgc ccgacgacac gttgagcatg
     5221 gccgggacgc gcccgatcgc ctgcagcgcg aagaacgtca ccacggctcc ggcggaattg
     5281 ggcagcagca cgccgacggc ttcgccttcg cgcgtcagcg gcttcagctt gtctcccagc
     5341 acaaaggcgc cggtgagcac gcggagatag ctgagcggcg agaaatcgac gtcctcgacg
     5401 atggtgcggc gcaggccgtt gagacgcgcc gccttgatca gcgagcggaa cagcgtctca
     5461 tcgatgttgg tcgtcgcgaa cagcgtctcc gacatgagct cgtagagcgc ctggccggcg
     5521 gccttgcggc gcaagcggcc cttcagcgac gggtcgacgt cgaggcggcg cggcggcatc
     5581 gccgtgacgc ggatctgcgg cgcgaagcgc ttcgccacgc gtcccttgag ccgcgtgaac
     5641 ggggtatgct gcgtgccgtc gagccgcacc gggatcaggt cggcgccggt cttgtcggcc
     5701 accatcgccg gcccgtcata gaccttcatc agcgagccgg tgaccgtcag ccggccttcc
     5761 gggaagatca cgacggggcg gcctttctcg accgcatgcg caagcgattt cagtgccatc
     5821 ggcttggtcg gatcaagcgc cgcgaagtcg acaaggctca gaagcgggcg cgcccaccat
     5881 cgcttggcga tttccgtgtt gacggcgaag accgggtcgc cgggcatgaa cgcggcaagc
     5941 accagcccgt cgagaaacga ctgatggttg gcgacgacga tccggcgcgc tccggcgcgt
     6001 ccgaaattct cgatgcctct cgcctccacg cggtagacga atctcaggat ggcgcgcgcc
     6061 acggccttga ggacgaggcg cgagagcagc cgcagggtga tatacgccgc gaccagattg
     6121 gccagcgcca gcagcgccgc gattgccgcg atcggaagct cgagccag
//
LOCUS       DATAIQ010000861         4015 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_159142, whole genome shotgun sequence.
ACCESSION   DATAIQ010000861 DATAIQ010000000
VERSION     DATAIQ010000861.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4015)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4015)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4015
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_159142"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(54..1022)
                     /gene="argC"
                     /locus_tag="VHN20_14110"
     CDS             complement(54..1022)
                     /gene="argC"
                     /locus_tag="VHN20_14110"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008131602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003942 -
                     N-acetyl-gamma-glutamyl-phosphate reductase activity
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HEX2726948.1"
                     /translation="MLTTTDTLSARQRTATVFIDGEAGTTGLGIRDRLRAVPGVEIRS
                     IAPERRKDPAAKRELLGEVDLVVLCLPDDGARETVALVDAMGADGPRVLDASTAHRVA
                     PGWVYGFAELEPGQADAIAAARRVANPGCYPTGAIALIRPLVDAGLLPPDYPVAINAV
                     SGYSGGGRSMIEAYEAGQAPAFELYGLGFEHKHVPETQKYSALTRRPIFVPSVGNFRQ
                     GMLVSVPLHLDMLPARPSARDLHEALRQRYPEGGLVRVAATTESGKAVERLEPEALND
                     TDLLELRVFGHKAYPHAVLVARLDNLGKGASGAAVQNIRLMLGLGD"
     gene            complement(1130..1609)
                     /gene="rpsI"
                     /locus_tag="VHN20_14115"
     CDS             complement(1130..1609)
                     /gene="rpsI"
                     /locus_tag="VHN20_14115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015926908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HEX2726949.1"
                     /translation="MATLQSLADLAGQPAQPASPEAPVHVQKLDAQGRAYATGKRKDA
                     VARVWIKPGPGQIIVNDKPVETYFARPVLRMILQQPLHVANRAGQYDVVVTVNGGGLS
                     GQAGAVRHGLAKALTHFEPELRPSLKREGFLTRDARVVERKKYGKKKARRSFQFSKR"
     gene            complement(1612..2073)
                     /gene="rplM"
                     /locus_tag="VHN20_14120"
     CDS             complement(1612..2073)
                     /gene="rplM"
                     /locus_tag="VHN20_14120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012116314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HEX2726950.1"
                     /translation="MKTLSLKPAEVEKKWVVIDATGLVVGRLASIVAMRLRGKHKANY
                     TPHVDCGDNVIIINADKVVLTGNKRDQKVYYHHTGYPGGIKERSARHILEGRFPERVV
                     EKAVERMLPRGPLFRRILGNLRVYKGTEHPHAAQQPELLDVAALNRKNVRH"
     gene            complement(2282..2695)
                     /locus_tag="VHN20_14125"
     CDS             complement(2282..2695)
                     /locus_tag="VHN20_14125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015824279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX2726951.1"
                     /translation="MGTTLQLEQGRDTGPAVSARTVLVVEDETLVRETIACELEDAGF
                     VVIEAETAEAGFAILQQRPVGLLFTDIRLPGHMDGWELAERARSLHPTLPVIYATGFS
                     TEEPRFVSHSIFLRKPYLPSAVVAAIEKLWDETPE"
     gene            complement(2776..3195)
                     /locus_tag="VHN20_14130"
     CDS             complement(2776..3195)
                     /locus_tag="VHN20_14130"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015926906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016790 - thiolester hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HEX2726952.1"
                     /translation="MMTRDEVEAFLDREFPQIHEGGRIYSVEEVGPLSARLRMACDAR
                     HIRPGGTLSGPSIMTLADLALYVAILAQIGPVALAVTTSLSFNFLRKPAQRDLIAECR
                     LLKLGKRLAVGEVFVRSDGDSEIACHATGTYSIPDRQ"
     gene            complement(3192..3680)
                     /locus_tag="VHN20_14135"
     CDS             complement(3192..3680)
                     /locus_tag="VHN20_14135"
                     /inference="COORDINATES: protein motif:HMM:NF020317.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GYD domain-containing protein"
                     /protein_id="HEX2726953.1"
                     /translation="MAIFISQGRYTRDAIQGMTVSPEDRSKPVGKLIKAAGGKLLSYY
                     LTFGEYDFLLVAEAPDEKAMAAAVLAAAGGGGVSDVRTTLALTPGDAMQAFEQARGLG
                     ESFRSAGQGAPAGRGQGGMAARAEGRSGARGEGRAAGAPDETDRAAVATRRTRGGRAS
                     PT"
BASE COUNT          602 a         1361 c         1401 g          651 t
ORIGIN      
        1 tgggcaatcg gcagtcggaa ctcgtcggcg attgactgcc gactgccgat cgcctaatcg
       61 cccaggccga gcatcagcct gatgttctgg accgcggcgc cggaggcgcc cttgccgagg
      121 ttgtcgaggc gggccaccag caccgcgtgg gggtaggcct tgtggccgaa gacgcgcagc
      181 tcgaggagat cggtgtcgtt gagcgcctcc ggctcgagcc gctctaccgc cttgccgctt
      241 tcagtcgtcg cggcgacgcg cacgagcccg ccttccggat agcgctggcg cagcgcctca
      301 tggaggtcgc gggcggacgg cctggccggg agcatgtcga gatgcagggg cacgctcacc
      361 agcatgccct ggcggaagtt gccgacggac ggcacgaaga tcggccgccg cgtcaacgcc
      421 gaatatttct gcgtttccgg cacgtgcttg tgctcgaagc cgagcccgta aagctcgaag
      481 gccggcgcct gtcccgcttc gtaggcctcg atcatcgagc gcccgccgcc gctgtagccg
      541 ctgacggcat tgatggcgac cgggtagtcc ggcggcagca ggcctgcatc gacgagcggg
      601 cggatcaagg cgatcgcgcc ggtggggtag cagcccggat tggcgacccg gcgcgcggcc
      661 gcgatggcgt cggcctggcc cggctccaac tcggcgaagc cgtagaccca gccgggagcg
      721 acccggtggg cggtcgaggc atcgagaacg cgcgggccgt ccgcgcccat ggcgtcgacg
      781 agggcgaccg tctcgcgcgc cccatcgtcc ggcaggcaca gcacgacgag atccacctcg
      841 ccgagcagct cgcgcttggc cgccgggtcc ttgcgccgct ccggcgcgat gctcctgatc
      901 tcgaccccgg gcaccgcgcg cagccggtcg cggatgccga gcccggtggt gccggcctcg
      961 ccatcgatga acacggtggc ggtgcgctgc cgcgcgctca atgtgtcggt ggtcgtcagc
     1021 atgggtgacc ctcgcgggaa tgcgccgttg atatatgggc cggaccggcc ggcaaacaaa
     1081 agggcggccg aagccgccct tgtctcgtct ccgtcgggag gacggcgaat cagcgcttcg
     1141 agaactggaa gctgcggcgg gctttcttct tgccgtattt cttgcgctcg acgacgcgcg
     1201 cgtcgcgggt caggaagccc tcgcgcttga gggaggggcg cagctccggc tcgaagtggg
     1261 taagcgcctt ggcgaggcca tggcgcacgg cgcccgcctg cccggacagg ccgccgccat
     1321 tgacggtcac gaccacgtcg tactggccgg cgcggttggc gacgtgcaga ggctgctgca
     1381 ggatcatgcg cagcacggga cgggcgaaat acgtctcgac cggcttgtcg ttgacgatga
     1441 tctggccggg ccccggcttg atccagacgc gcgccaccgc gtccttgcgc ttgccggtgg
     1501 cgtaggcgcg cccttgcgcg tcgagcttct ggacgtggac cggcgcctcg gggctggcgg
     1561 gctgcgccgg ctggccggct agatcggcga gggattgcaa ggtcgccatg gtcagtgtct
     1621 cacgttcttg cggttgagag cggcaacgtc gagcagctcg ggctgctgcg ccgcgtgcgg
     1681 gtgctcggtg cctttgtaga cgcgcaggtt gccgaggatc cgccggaata acggaccgcg
     1741 cggcagcatg cgctcgaccg ccttctcgac gacgcgctcg gggaagcggc cttccaggat
     1801 gtggcgcgcc gagcgctcct tgatgccgcc aggatagccg gtgtggtggt agtagacctt
     1861 ctggtcgcgc ttgttcccgg tgagcacgac cttgtcggcg ttaatgatga tgacgttgtc
     1921 gccgcagtcg acgtgggggg tgtagttcgc cttgtgcttg ccgcgcaggc gcatggcaac
     1981 aatcgaggcc agacggccga ccacgaggcc ggttgcgtcg atcacgaccc actttttctc
     2041 gacttcggcg ggtttcagcg aaagcgtttt cattgcgctg catcccgtgg agccctggct
     2101 ccggtttcaa aaaagacaaa ccgccgcgga agcgcggcgg cgatggcggg cctgatacgg
     2161 gaaggcgcac ccgctgtcaa tcgttttcgg catccagaac gacggcgaaa cccttgtacg
     2221 gcctaggttt gcgcgtgacg gtattataat accgcgatgt ccgggcggcg ccgcgccgcc
     2281 gtcattccgg cgtctcgtcc cacagtttct cgatggccgc cacgaccgcc gagggcaggt
     2341 agggcttgcg caggaagatg ctgtgggaga cgaagcgcgg ctcctcggtg gaaaagccgg
     2401 tcgcgtagat caccgggagc gtcgggtgca gcgagcgcgc cctttcggcg agttcccagc
     2461 catccatatg gccaggcagg cggatatccg tgaacagaag gccgaccggc cgctgctgga
     2521 ggatcgcgaa tcctgcctcg gcggtctccg cctcgataac cacgaacccg gcatcctcga
     2581 gttcacaggc gatggtctcg cggacgagcg tctcgtcctc cacgaccagg acggtccgtg
     2641 ccgagactgc cgggccggtg tcccggcctt gctcgagctg cagtgtcgtt cccattcctc
     2701 gaccccgcga acgttcacgc cgccgccgga ggtatagtcg aaggatgggg cgcaggccaa
     2761 gcgggccgtt tcgccttact ggcgatccgg gatcgaatag gtgccggtgg cgtgacaggc
     2821 gatctccgaa tcgccgtcgc tgcgcacgaa gacctcaccg acggcgaggc gcttgcccag
     2881 cttgaggagc cggcactcgg cgatcagatc ccgctgcgcc ggcttgcgca ggaagttgaa
     2941 cgacaggctc gtggtcacgg ctagcgccac aggcccgatc tgcgcgagaa tcgccacgta
     3001 gagggcaaga tccgccagcg tcatgatcga cggccccgac agcgtgccgc cagggcggat
     3061 atggcgcgcg tcgcacgcca tgcgcagacg cgcggagagc ggccccacct cttccacgga
     3121 atagatgcgg ccgccctcat ggatctgagg gaactcgcga tcgagaaagg cctcgacctc
     3181 gtcgcgggtc atcatgtcgg agatgcgcgc ccgccgcgcg tccgtcgggt ggcgacggcc
     3241 gcgcgatcgg tctcgtcggg cgcccccgcc gcgcgaccct cgccgcgcgc gccggagcgg
     3301 ccctcggccc gcgccgccat cccgccctgc ccgcgccccg caggagcgcc ctgcccggcg
     3361 gaccggaacg attcgccaag gccgcgcgcc tgctcgaagg cctgcatggc gtcacccggc
     3421 gtcagggcga gcgtggtgcg cacgtcgctg accccgccgc ccccggctgc ggccagcacg
     3481 gccgccgcca tcgccttctc gtcgggcgcc tcggcgacca gcaggaagtc gtattcgccg
     3541 aaggtcaggt aatatgacag aagcttgccg ccggccgcct tgatgagctt tccgacaggt
     3601 ttcgagcggt cttccggact gaccgtcatc ccctggatgg cgtcgcgcgt gtagcgtccc
     3661 tgagaaatga agattgccat cgtcccctcc cgttcaggac ggctcattca tgcaccgccc
     3721 ggcctctctg gcaatcgccg cgagccacgt tcttgacgtg ccgcggcaaa cgcttagaca
     3781 cgttcgaaag gcgccgcagc tggcgagccg gcgccgccat atctccggcg ggagtaccct
     3841 cagggtgcag cccaatgctg ctccaccgcc ctcgacctgt tctgaccgga ggtctcccat
     3901 gaagctcttg cggccggttg ctgcgctcgg cgcaatgctg atggcgtgcg tgccggtcgc
     3961 cgcgcgcgcc cagccggcgg acgtgaccgt gttcgccgca gcgagcctca agaac
//
LOCUS       DATAIQ010000862         1899 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_414260, whole genome shotgun sequence.
ACCESSION   DATAIQ010000862 DATAIQ010000000
VERSION     DATAIQ010000862.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1899)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1899)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1899
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_414260"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            239..>1899
                     /gene="typA"
                     /locus_tag="VHN20_14140"
     CDS             239..>1899
                     /gene="typA"
                     /locus_tag="VHN20_14140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014490708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HEX2726954.1"
                     /translation="MKLRNIAIIAHVDHGKTTLVDRLLQQSGAFRDNQRVAERVMDSN
                     DLERERGITILAKATSVVWKDTRINIVDTPGHADFGGEVERILNMVDGAIVLVDAAEG
                     PMPQTKFVVGKALKIGLKPIVLINKVDKPDGRPNEVINEVFDLFAALDANDEQLDFPI
                     LYGSAKEGWIADNAEGPKDQGMAPLFDLVLKHVASPQVEEGSFRLLGTILEANPYLGR
                     IVTGRITSGTIKPNQSIKVLSRDGKLVEQGRVSKILAFRGIERQPIELGEAGDIISIA
                     GLEKGTVADTFCDPAVEAPLPAQPIDPPTVAMTFLVNDSPLAGTEGDKVTSRVIRDRL
                     LKEAEGNVALKIQESTDKDAFEVAGRGELQLAILIETMRREGFELGVSRPKVVLTRDD
                     ATGALLEPVEEVVIDVDEEHSGVVVQKMSERKAEMIEMRPSGGNRQRLVFHAPTRGLI
                     GYQGELLTDTRGTAIMNRLFHDYQPFKGDIAGRRNGVLISNDAGEAVAYALWNLEDRG
                     PMMIEPGWKVYQGMIVGEHTRDNDLVVNPCKKKHLTNMRASTSDES"
BASE COUNT          355 a          639 c          603 g          302 t
ORIGIN      
        1 tgtcccatgc ggcggaatag ttaacggcag tcccgggcga gcgaagcgag acccgggacc
       61 acgtgccgga ccggttgctg ggcttccggc gcgatcccgg ctcgggcttc gcccggtccc
      121 ggcttacgat tcaggggttt ccgccctggt cctgccgtct tttccgcact atatggcggt
      181 gcaagagaat cgtgctgccc ggcctgcgcc gggcagcttt gcttttggaa tgccctcaat
      241 gaagctgcgc aatatcgcca tcatcgctca cgtcgaccat ggcaagacca cgctcgtcga
      301 ccggctgctg cagcagtcgg gcgccttccg cgacaaccag cgtgtcgccg agcgcgtcat
      361 ggactccaac gacctcgagc gcgagcgcgg catcaccatc ctggccaagg ccacctcggt
      421 ggtctggaag gatacccgca tcaacatcgt cgacacgccc ggccacgccg atttcggcgg
      481 cgaggtcgag cgcatcctca acatggtgga tggcgccatc gtgctggtcg acgccgccga
      541 agggcccatg ccgcagacca agttcgtcgt cggcaaggcg ctcaagatcg ggctcaagcc
      601 gatcgtgctc atcaacaagg tcgacaagcc ggatgggcgg ccgaacgagg tcatcaacga
      661 ggtgttcgac ctgttcgcag cgctcgatgc caatgacgag cagctcgact ttccaatcct
      721 ctacggctcc gccaaggagg gctggatcgc cgacaacgcc gaaggtccca aggaccaggg
      781 catggcgccg ctcttcgacc tcgtgctcaa gcatgtcgcg tcgccgcagg tcgaggaggg
      841 ctcgttccgc ctgctcggca cgatcctcga agccaatccg tatctcggcc ggatcgtcac
      901 cggccgcatc acctcaggca ccatcaagcc gaaccagagc atcaaggtgc tctcgcgcga
      961 cggcaagctc gtcgagcagg ggcgcgtgtc gaagatcctc gcgtttcgcg gcatcgagcg
     1021 ccagccgatc gagcttggcg aagcgggaga catcatctcc atcgccggtc tggagaaggg
     1081 caccgttgct gacaccttct gcgatccggc cgtcgaggcg ccgctgccgg ctcagccgat
     1141 cgatcccccg accgtcgcca tgaccttcct ggtcaacgat tccccccttg ccggcacgga
     1201 aggcgacaag gtgacgagcc gcgtcatccg cgaccgcctc ctcaaggagg cggagggcaa
     1261 cgtcgcgctg aagatccagg aaagcaccga caaggacgcg ttcgaggtgg ccgggcgcgg
     1321 cgaactgcag ctcgccatcc tgatcgagac catgcgccgc gaaggtttcg agctcggcgt
     1381 ctcgcggccg aaggtcgtgc tgacgcgcga cgacgccacg ggcgcgctgc tcgagcccgt
     1441 cgaagaggtg gtgatcgacg tcgacgagga gcattccggc gtcgtggtgc aaaagatgtc
     1501 ggaacgcaaa gccgagatga tcgagatgcg gccgtccggc ggcaatcgcc agcgcctcgt
     1561 ctttcatgcg ccgacgcgcg gcctgatcgg ctaccagggc gagcttctca ccgacacgcg
     1621 cggcacggcc atcatgaacc gcctgtttca cgactaccag ccgttcaagg gcgacatcgc
     1681 cgggcgccgc aacggcgtgc tgatctccaa cgacgccggc gaggcggtcg cctacgcgct
     1741 gtggaacctc gaggaccgcg gtccgatgat gatcgagccg ggctggaagg tgtaccaggg
     1801 gatgatcgtc ggcgagcaca cgcgcgacaa cgacctcgtg gtcaatcctt gcaagaagaa
     1861 acatctgacc aacatgcgcg cctcgacctc cgacgaatc
//
LOCUS       DATAIQ010000863         4264 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_414416, whole genome shotgun sequence.
ACCESSION   DATAIQ010000863 DATAIQ010000000
VERSION     DATAIQ010000863.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4264)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4264)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4264
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_414416"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(104..376)
                     /locus_tag="VHN20_14145"
     CDS             complement(104..376)
                     /locus_tag="VHN20_14145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726955.1"
                     /translation="MRTIDGTAMRIFRRDFRLLWIGLAATAVSLIFGFTPLLWMIKSW
                     LWGVEPHDYPEIFWIFVALPMSLGVVLAGIVYAWIVLNPFGPPDPK"
     gene            complement(363..1514)
                     /locus_tag="VHN20_14150"
     CDS             complement(363..1514)
                     /locus_tag="VHN20_14150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012383355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX2726956.1"
                     /translation="MTLTIRDVSITGYRSLRRIRFPVEPLTVFVGPNGVGKTNLYRAL
                     QLVQAAAAGTFARDLAREGGMQSALWAGERGALDKPRIVLGVSLASSETGLNFDYEIA
                     AGLIPQGKDVTLGAAFPLEPQVKSERLALAGQSRPVVLLERKGPAGFVRDEKGVRREL
                     GMSLLATDTALGSLEDAARLPELHWLRQTMLSWRFYHDFRTDHAAPLRQPCLAVTTPT
                     LSSDGSDLAAVFATLVHIRQDTADIDGMIDEAFPGARLVVPMPDRTATFGMIFPDYPK
                     RVFEAGELSDGTLRYLALAGSLLSYRLPPFVALNEPEASLHPDLLEPLARLIVRAAER
                     TQIWLVTHSERLAAAIAEHGRVTPRRVVKQDGATWFEGLRLTGEFDEDD"
     gene            complement(1673..2359)
                     /locus_tag="VHN20_14155"
     CDS             complement(1673..2359)
                     /locus_tag="VHN20_14155"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEX2726957.1"
                     /translation="MLAYDWIRGHGRELFRVTVTDRRAASVEAETRACLEAAFAAIRE
                     TGLPLEHIVRSRLWTRDAEARRRASDTRRAELAGRLRGASASLIAPARLPADTSVAID
                     LIVLRAGAPTAEKAIAEYDPPIAPPEFVSLDGMVFLSGNTSTAPGFDTQLTRIQSQIH
                     TSLGKTGGTWSRVVHVSAFVSETLDQDGARRQIRERFPELACPLEMTSVAGFSAPEKL
                     VEIEVTADLR"
     gene            complement(2383..3891)
                     /locus_tag="VHN20_14160"
     CDS             complement(2383..3891)
                     /locus_tag="VHN20_14160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007773247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HEX2726958.1"
                     /translation="MDVLSGLLHGFAVALQPVNLFWCFVGCLLGTVVGIMPGLGPAAT
                     IAMLMPLTFGMDPTGGIIMLAGIYYGAKYGGSTTSILLNMPGESSSVVTCIDGYQMAR
                     RGRAGAALGIAAIASFVAGTVGVLLLTLVAPPIAAFALSFSSPEYFALMCLGLALVVL
                     LSGTSLVKGLLSLLVGLWLTTMGTDLFTAQSRFTFGQSSLLGGLDFMVIAIGVFAIAE
                     VLASVEAGSAARMLPVPRGIRNLLPSREELKACRFAFVNGSITGFIIGVLPGAGSSIA
                     SFIAYGIEKAASKHPEKFGTGVPEGLAAPEGANNADTGGALVPLLTLGIPGGGTTAIL
                     LSVLILWGIRPGPLMMTDAPDVFWGLVASMYIGNVVLLLMNLPLVPLFAQILRIPAFI
                     LYPVILGISVVGAYSVSGRVFDVALLAGFGLLGYAMVKLHYPTAPLILGFVLGDAMER
                     AVRQSLMMSQGDLSILVSRPLSAGMLAAAALILVSPAVGAIRRRRVAAVAQG"
     gene            complement(3893..>4264)
                     /locus_tag="VHN20_14165"
     CDS             complement(3893..>4264)
                     /locus_tag="VHN20_14165"
                     /inference="COORDINATES: protein motif:HMM:NF018979.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter TctB
                     family protein"
                     /protein_id="HEX2726959.1"
                     /translation="YSAPDGPGPGFFPIWYGVGIIVLSLVLVARSLLSPAREDAEPAD
                     RIGLLRALGTWLAFATAVALLKPLGFTISFALLTFVIVAVVFRRPLVVAGVTALATAA
                     AFYLTFPLALGVPLPAGPLGF"
BASE COUNT          771 a         1390 c         1518 g          585 t
ORIGIN      
        1 aggcagcggt ttttggtacc gccattccca ggttcgaatc ctggcgcccc agccactccc
       61 gcttggtcca ttccgatgac atgggtggcg gatagctggc cgctcacttc ggatcgggcg
      121 gcccgaatgg gttgaggacg atccacgcat agacgatgcc ggcgaggaca acaccgagcg
      181 acatcggcag cgccacaaag atccagaaga tctcggggta gtcgtgcggc tccacgcccc
      241 acagccagct cttgatcatc caaaggagcg gcgtgaagcc gaagatgagc gagaccgccg
      301 ttgcggcgag cccgatccac aggagtcgga aatctcgtcg gaagatgcgc atggcagtcc
      361 cgtcaatcgt cctcatcgaa ttcaccggtc aggcggaggc cctcgaacca tgtcgcgccg
      421 tcctgcttca cgacccggcg tggcgtgacc ctgccatgct cggcaatcgc cgccgcgagc
      481 cgctccgaat gcgtcacgag ccagatctgg gtgcgctccg cagcccggac gatcaggcgc
      541 gcaagcggct cgaggagatc ggggtggagg ctcgcctcgg gctcgttcag cgccacgaag
      601 ggcggcagcc gatacgacag aagggacccg gcgagggcga ggtagcgcag cgtgccgtcg
      661 gacagctcgc cggcctcgaa cacccgcttc gggtagtcgg ggaagatcat gccgaaggtc
      721 gccgtgcggt cgggcatggg aaccacgagc cgcgcgcctg ggaatgcctc gtcgatcatg
      781 ccatcgatat ccgccgtgtc ctggcggatg tgcacgagcg tcgcgaacac ggcggcgaga
      841 tcggagccgt cggacgatag ggtcggcgtc gtgaccgcaa ggcacggctg ccgcaacgga
      901 gccgcgtggt cggtgcggaa gtcgtgatag aagcgccagc tcagcatcgt ttggcgcagc
      961 cagtgcagct ccggcaggcg ggcggcgtcc tccagcgacc ccagcgccgt gtcggtggcg
     1021 agaaggctca ttccgagctc gcgccggact cccttctcgt cgcgcacgaa gccggccggg
     1081 cccttgcgtt cgaggaggac gacaggccgg ctctgtcccg cgagggcgag cctctccgac
     1141 ttcacctgcg gctcgagcgg gaaggcggcg ccgagagtga cgtccttccc ctgcgggatc
     1201 agtcccgcgg caatctcgta atcgaagttc aatccggttt cggaagaggc aagcgacacg
     1261 ccgagcacga tgcgtggctt gtccagggct cctcgctcac ccgcccacaa ggccgactgc
     1321 atccctccct cgcgggccag gtcgcgcgca aaagtgcccg cggcggccgc ctggacgagc
     1381 tgcagggcgc ggtacaggtt cgtcttgccg acgccgtttg gcccgacaaa cacggtcagg
     1441 ggctcgacag gaaagcgaat ccggcggagc gagcggtagc cggtgatcga aacgtcgcga
     1501 atggtcagcg tcatgggcca ttcccccggc tggcgcgagc gccgtgcaac actccgggcc
     1561 cccgcaacga tgcaggacta tattctttgc caatatggat gtcactggtg tggggtcccg
     1621 agcgggttcg cgccgcattt tgcggtgcgc tctacctagc gcgggaatgt cctcaccgca
     1681 ggtctgccgt cacctcgatc tcgacgagct tttccggcgc cgaaaagccg gcgacgctcg
     1741 tcatctcgag agggcatgcg agttcgggga agcgctccct gatctgccgg cgggcgccgt
     1801 cctggtcgag ggtttcggag acgaaggcgg agacgtgcac cacgcggctc catgtgcctc
     1861 cggtcttgcc caggctcgtg tggatctggc tctggatgcg ggtcagctgg gtgtcgaagc
     1921 caggggcggt gctggtgttg ccggacagga agaccatgcc gtcgaggctt acgaattccg
     1981 gcggcgcgat cggcggatcg tattcggcga tcgccttctc cgcggtcggc gcgccggcgc
     2041 gcagcacgat caggtcgatg gcgacggacg tatcggcggg gaggcgggcc ggagcgatca
     2101 ggctggcgct ggcgccgcgg agacggccgg cgagctcggc gcggcgcgta tcgctggcgc
     2161 ggcgccgcgc ttcggcgtcg cgggtccaga ggcggctacg cacgatgtgc tcgagcggca
     2221 gcccagtctc gcggatagcc gcgaaggcgg cctcgagaca tgccctggtt tcggcctcca
     2281 cgctcgccgc gcgccggtcg gtgacggtga cgcggaacag ctcgcgtcca tgcccccgga
     2341 tccagtcgta agcgagcatc tcgaaagtcc gatttggcct aatcaacctt gcgcgacggc
     2401 ggcgacgcgg cgccgcctga tggcgccgac cgccggcgac accaggatca gcgccgccgc
     2461 tgcgagcatg ccggccgaaa gcgggcgcga gacgaggatg ctgagatcgc cctgcgacat
     2521 catcagggac tggcgcaccg cacgctccat agcgtcgccg agcacgaagc caaggatcag
     2581 cggcgccgtc ggatagtgca gcttcaccat cgcgtatccg aggaggccga acccggcaag
     2641 cagggcgacg tcgaagaccc ggccggagac actgtacgcg ccaaccaccg agataccgag
     2701 gatcaccgga tagaggatga aagcggggat gcgcaggatc tgcgcgaaga gcggcacgag
     2761 cggcaggttc atcagcagca gcacgacgtt gccgatatac atgctggcga cgaggcccca
     2821 gaagacgtcg ggtgcgtccg tcatcatcag cggcccgggc ctgatgcccc acagaatcag
     2881 caccgagagc aggatcgccg tggtgccgcc gccgggaatg ccgagcgtca gcagcggcac
     2941 cagcgcgccg ccggtgtcgg cgttgttggc gccctcgggc gcggccagcc cttccggcac
     3001 cccggtgccg aacttttccg gatgcttcga ggcggccttc tcgatgccgt aggcgatgaa
     3061 cgaggcgatc gacgacccgg cgccgggcag gacgccgatg atgaagccgg tgatcgagcc
     3121 gttgacgaag gcaaaacggc acgccttgag ctcctcgcgg ctcggcaaca ggttgcggat
     3181 gccgcgcggc accggcagca tcctggcggc gctgcccgcc tcgacgctcg ccagcacctc
     3241 ggcgatggcg aagacgccga tggcgatcac catgaagtcg aggccgccga gcagcgagct
     3301 ctgcccgaac gtgaagcgcg actgcgccgt gaacaggtcg gtgcccatgg tcgtgagcca
     3361 caggccgacg agcagcgaca ggaggccctt gaccagcgag gtgccggaca gcagcaccac
     3421 gagcgccagc cccaggcaca tcagcgcgaa atattcgggc gagctgaacg acagggcgaa
     3481 ggcggcgatg ggcggcgcca ccagcgtgag cagcaggacg ccgacggtgc cggcgacgaa
     3541 ggatgcgatg gcggcgatgc cgagggcggc gccggcgcgg ccgcggcgcg ccatctggta
     3601 gccgtcgatg cacgtcacga ccgacgacga ttcgccgggc atgttgagca ggatcgacgt
     3661 ggtcgagccg ccgtatttgg ccccgtaata gatgccggcg agcatgatga tgccgcccgt
     3721 cgggtccatg ccgaaggtga gcggcatgag catcgcaatg gtcgccgccg gaccgaggcc
     3781 gggcatgatg ccgaccacgg tgcccaggag gcagccgacg aagcaccaga acaagttcac
     3841 gggctgcagt gcgaccgcga acccgtgcag aagcccgctc agcacgtcca tgtcagaacc
     3901 cgagcggccc ggcgggcagg ggcacgccca gcgccagcgg gaaggtgagg tagaacgccg
     3961 cggcggtggc cagcgcggtc acgccggcga cgaccagcgg ccgccgaaac accaccgcga
     4021 cgatgacgaa cgtgagcagt gcgaagctga tggtgaagcc gagcggcttc agcaaggcaa
     4081 cggcggtcgc gaaggcgagc caggtgccga gcgcgcgcaa gaggccgatc cggtctgctg
     4141 gttcggcgtc ctcgcgcgcc gggctcagca gcgatcttgc caccagcacg agcgagagga
     4201 cgataatgcc gacgccgtac cagatcggaa agaagccggg tccagggccg tcaggcgccg
     4261 aata
//
LOCUS       DATAIQ010000864         2461 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_342775, whole genome shotgun sequence.
ACCESSION   DATAIQ010000864 DATAIQ010000000
VERSION     DATAIQ010000864.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2461)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2461)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2461
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_342775"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..262
                     /locus_tag="VHN20_14170"
     CDS             <1..262
                     /locus_tag="VHN20_14170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015931081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726960.1"
                     /translation="RAAAVSLGGGFAAVVISPGEAKDCRRENVPPGVRVAQQVGCKPT
                     PQPAAKERAVLKAGRRPGFIDLGNGTELRISGDAGLDAGYRR"
     gene            348..704
                     /locus_tag="VHN20_14175"
     CDS             348..704
                     /locus_tag="VHN20_14175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009492655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726961.1"
                     /translation="MLLAACEGQHWCYEICEHTDGYLVQMRDLETGDLNEEFATIFRT
                     MPVAFAYAEMSAAFDRFAAAEMEDSEDEDFAIDVVLQERNFIDLSDRLGDTGLNGLTL
                     KAWERASHNGPRRVCH"
     gene            complement(717..1559)
                     /gene="panC"
                     /locus_tag="VHN20_14180"
     CDS             complement(717..1559)
                     /gene="panC"
                     /locus_tag="VHN20_14180"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003612870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004592 - pantoate-beta-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HEX2726962.1"
                     /translation="MAVPVARTATALRQAVAGWRDAGEHIALVPTMGALHEGHLALVR
                     QGRRRAGRVVVSIFVNPTQFGPGEDLSKYPRTFADDRRRLDGLADLIFAPAVEEMYPE
                     GAATTVSVAGPAAVGLEDRFRPTHFPGVATVVAKLLIQATPDVALFGEKDYQQLKVVT
                     RMAADLLLPVRIVPGATVREPDGLALSSRNRYLSPADRAKAPLLHRSLQACAAAVRAG
                     APLADALAQARQSVTSAGFDLDYLEARDAETLAPVASPGEAPLRLLVAARIGTTRLID
                     NIAV"
     gene            1692..2426
                     /locus_tag="VHN20_14185"
     CDS             1692..2426
                     /locus_tag="VHN20_14185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009489728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEX2726963.1"
                     /translation="MTDKKDVASEGIAGVVAPSPGAAIETFLHQARQVSPAPERSPLA
                     RLVFALDATMSRQPTWDLACRVQGDMFETAADIGGLSVQLVYFRGFNECRASKWVAEP
                     RALTDLMARIGCRGGNTQIGRVLRHVRNEAHRGPLKAFVYVGDAMEEPVDDLCAVAGE
                     LGLLGVKGFLFHEGGDPVAAGAFQEIARLTGGAYARFDTGAPRSLAGLLRAAAAYASG
                     GASALERLAGRDGDARKLLSAMSTGR"
BASE COUNT          377 a          816 c          899 g          369 t
ORIGIN      
        1 gcgcgcggcg gcggtttctc tcgggggtgg cttcgccgcg gttgtcatct cgccgggcga
       61 agcgaaagat tgtcggcgcg agaacgtgcc gcccggagtc cgggtggcgc aacaggtcgg
      121 ttgcaaaccg acgccgcagc cagcagccaa ggagcgcgcc gtcctcaagg ccggccgccg
      181 ccccggcttc atcgacctcg gcaacggcac cgagctgcgc atcagcggcg atgccggtct
      241 ggacgcgggc taccggcgct gacggcgccg catgaggcgg accaaggcgc ggacggaacc
      301 ccaagccgct ggtcagcatt gcatcttctg aagagctgga gggtacgatg ctcctcgccg
      361 cgtgcgaagg acagcactgg tgctacgaga tctgcgagca cacggacggc tacctcgtcc
      421 agatgcgcga tctggagacc ggcgatctca acgaggagtt cgcgacgatc ttccgcacca
      481 tgccggtcgc cttcgcatat gcggagatgt cggccgcctt cgaccgcttc gccgctgccg
      541 agatggagga cagcgaggat gaggacttcg ccatcgacgt cgtcctgcag gagcggaact
      601 tcatcgacct gagcgacagg ctcggcgata ccgggctgaa cggcctgacc ctgaaggcgt
      661 gggagcgggc cagtcataac ggtccccgcc gggtctgcca ctgagcggcg gcgcgttcaa
      721 accgcaatgt tgtcgataag gcgggtggtg ccgattcgcg ccgccacgag gagccgcagc
      781 ggcgcctcgc ccggcgacgc gaccggtgcg agcgtctcgg cgtcgcgcgc ctcgaggtag
      841 tccagatcga acccggccga ggtcacgctc tgccgcgctt gtgccagggc gtccgcgagc
      901 ggggcgccgg cccggaccgc cgccgcgcag gcctgcagcg agcggtgcag caggggggct
      961 ttcgcccggt ctgcggggct caggtagcgg ttgcgggacg acagcgcgag gccgtcgggc
     1021 tcgcgcaccg tcgcgcccgg gacgatgcgg accggcagga gcaggtcggc ggccatgcgc
     1081 gtcacaacct tgagttgctg gtagtccttc tccccgaaca gggcgacgtc cggcgtcgcc
     1141 tggatcagga gctttgccac cacggtcgcc acgccgggga aatgcgtcgg ccggaaacgg
     1201 tcctccaggc cgaccgcggc cggtccggca accgagacgg tcgtggcggc accctctgga
     1261 tacatttcct ccacggcggg cgcgaagatc aggtcggcga gtccgtcgag ccggcgccgg
     1321 tcgtcggcaa atgtgcgcgg gtatttcgac agatcctccc cgggcccgaa ctgcgtcgga
     1381 ttgacgaaga tcgagacgac gacccgcccg gcgcgccggc gcccttgccg gacgagtgcg
     1441 aggtggccct cgtgcagggc gcccatggtc ggcacgaggg cgatgtgctc gcccgcgtcg
     1501 cgccagccgg cgacggcttg gcggagggct gttgcggtgc gagcgaccgg gacggccatc
     1561 gaaatctcat gcgagggaac aaagctgcag gccgccccta gcagcctgcc ctcgctgcgg
     1621 caattcccgg ccggtcaggc gattgcatgc gcgtcgggaa aatccaaaat cttccgtgcg
     1681 ggggagcatt gatgaccgac aaaaaagacg ttgcgagcga aggaatagcg ggggtggtgg
     1741 ccccttcgcc gggcgcggcg atcgaaacat tcctccacca ggcacggcag gtcagccctg
     1801 cgcccgagcg cagcccgctt gcccggctcg tgtttgccct cgatgcgacc atgagtcggc
     1861 agccgacctg ggatctggcg tgccgagtgc agggggacat gttcgagacg gcggctgaca
     1921 tcggcggcct ttcggttcag ctcgtctatt tccgtggctt caatgagtgc cgggcctcga
     1981 aatgggtggc cgagccgcgt gcgctgaccg acctgatggc gcggatcggc tgccgcggcg
     2041 gcaataccca gatcggccgg gtgctgcggc acgtgcgcaa cgaggcgcac cgaggcccct
     2101 tgaaggcctt cgtctatgtg ggcgacgcga tggaagagcc ggtcgatgat ctgtgcgccg
     2161 tggccggcga gctcgggctc ctcggcgtca aaggtttttt gttccacgag gggggcgacc
     2221 cggtcgcggc cggtgccttc caggagatcg cccgtctgac agggggcgcc tacgcgcggt
     2281 tcgacaccgg cgcaccgcgg tcgttggcgg gcttgttgcg ggccgccgcc gcctatgcga
     2341 gcggcggcgc cagcgccctc gagcggctcg ccggccgcga cggcgacgcc cgcaagctgc
     2401 tgagcgccat gagcacgggc cgatgatcac gctgttttac ggcctcgccg ccgtcgcctt
     2461 g
//
LOCUS       DATAIQ010000865         1765 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_342842, whole genome shotgun sequence.
ACCESSION   DATAIQ010000865 DATAIQ010000000
VERSION     DATAIQ010000865.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1765)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1765)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1765
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_342842"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(203..1255)
                     /locus_tag="VHN20_14190"
     CDS             complement(203..1255)
                     /locus_tag="VHN20_14190"
                     /inference="COORDINATES: protein motif:HMM:NF033542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HEX2726964.1"
                     /translation="MEYVGIDWSYRRAAWCALSDAGAIVGEGAVSSDEDGLARLVMER
                     GTEVRAVVEMMSGAIWVRDTLVTAGWEVQIAHARKVRDVAPLACKTDKVDARVLAELC
                     RRDLVPELWVPALVDRELRERLRRRMHLVRMRASAMNRIFGLLTQWGLRFSLKRLREP
                     DAMTLLEQRGVPLVWRRSIAEALAVIELLDARIGAIDAELGPLARADTRVALLDTIPG
                     VGVLLGLTIASEIGDVARFASPRKLVGYAGMAPKVSQSGDRSRTGALSKAGSRTLRWA
                     AVEAAQHAWRPTNPWHQLYTDVAKRAGKNPAKSAVARKILIAAWHVLSRQQPFKPAAP
                     RRAHPASASSRCFLAA"
     gene            complement(1370..>1765)
                     /locus_tag="VHN20_14195"
     CDS             complement(1370..>1765)
                     /locus_tag="VHN20_14195"
                     /inference="COORDINATES: protein motif:HMM:NF024627.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="right-handed parallel beta-helix
                     repeat-containing protein"
                     /protein_id="HEX2726965.1"
                     /translation="GDGIAIENASGNRVARNVILDARKNGIYLGLNEPPIGGVNNVVR
                     RNVVRRSGEDGFKVRSKDHHSLLKGNLARRSGDDGFDVDSSTTTLTGNRARRNGDLGI
                     EAVFGVINGGGNLASGNGNPLQCLNVTCH"
BASE COUNT          248 a          595 c          618 g          304 t
ORIGIN      
        1 ggacgccgcg gtcaagcacc gtttcggcga ctggcaatgg gcggcggcgt gtcggtgctc
       61 gacggcggag gccggcaagc tggtgccggt gtggccgcgt cgtgacccgg atgtggagcg
      121 gtgctcagtt ctgtttcggc gctcgggtct cgcggagtgt tcgttggagc tgtctcggct
      181 tctcaatttc catgcagggc cgtcaggcgg ccagaaagca gcgggagctt gccgaggcag
      241 ggtgggcccg gcgtggcgcg gcgggcttga acggctgctg gcgcgacagg acgtgccagg
      301 cggcgatgag gatcttgcgg gcgacggcgg acttggcggg gttcttgccg gcgcgtttgg
      361 cgacgtcggt gtagagctgg tgccaggggt tggtgggtcg ccaggcgtgt tgggcggctt
      421 cgacggcggc ccagcgcagc gtccgcgatc ccgccttcga caaggcgccg gtccgtgatc
      481 ggtcgccgga ctggctgacc ttcggcgcca tgcccgcgta gccgacgagt ttgcgtggcg
      541 aggcgaagcg cgcgacgtcg ccgatctcag acgcgatcgt gagtccgagc aggacgccga
      601 cgccggggat ggtgtccagc agcgcgacgc gcgtgtcggc gcgcgcgagc gggccgagct
      661 ctgcgtcgat cgcgccgatg cgcgcgtcga gcagctcgat cacagcgagc gcttcggcaa
      721 tcgagcgtcg ccagaccagc gggacgccgc gttgctcgag cagcgtcatc gcgtcgggtt
      781 cgcgcaaccg cttgagtgag aaccgcaggc cccactgcgt cagcagcccg aagatgcggt
      841 tcatcgccga cgcgcgcatg cggaccaggt gcatccgccg acggagccgc tcgcgcagct
      901 cgcggtccac cagcgccggc acccacaact cgggcaccag gtcacggcgg cacagctcgg
      961 cgagaacgcg cgcgtcgact ttgtcggtct tgcacgccag cggcgcgacg tcgcggacct
     1021 tgcgcgcgtg cgcgatctgc acctcccagc ccgcggtcac aagcgtgtcg cggacccaga
     1081 tcgccccgct catcatctcc acgaccgcac ggacctcggt gccgcgctcc atcacgagcc
     1141 gcgcgagacc gtcctcgtcg ctggacaccg caccctcgcc gacgatcgcg ccggcgtcac
     1201 tgagcgcgca ccacgccgca cgccgatagg accaatcgat gccgacatac tccaccgcag
     1261 ggcctccctc tcgcggggtt gagattcaga cgacctcagt gtcctgcggg gaggccctcc
     1321 tcatgacatt ccatgcaacg caccacttcg gcctcgtcgg ggaacgctgc tagtggcatg
     1381 tgacgttcag gcactggagc gggtttccgt tgccgctggc gaggttgccg ccaccgttga
     1441 tcacgccgaa caccgcctca atgccgaggt cgccgttgcg tcgcgcccgg ttgccggtca
     1501 gcgtggttgt gctgctgtcc acgtcgaagc cgtcgtctcc ggaccgcctt gcgagattgc
     1561 ctttgaggag gctgtggtgg tccttgcttc tgaccttgaa cccatcctcg ccgctcctcc
     1621 tgaccacatt tcggcgaacg acgttgttga cgccgccgat cggaggctcg ttgagtccga
     1681 ggtagatgcc gttctttcga gcgtcgagaa tgacgttgcg cgcaacccga ttgccgctcg
     1741 cgttctcgat cgcgatgccg tctcc
//
LOCUS       DATAIQ010000866         4015 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_205028, whole genome shotgun sequence.
ACCESSION   DATAIQ010000866 DATAIQ010000000
VERSION     DATAIQ010000866.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4015)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4015)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4015
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_205028"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..673
                     /gene="phoB"
                     /locus_tag="VHN20_14200"
     CDS             <1..673
                     /gene="phoB"
                     /locus_tag="VHN20_14200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0006796 - phosphate-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="phosphate regulon transcriptional regulator
                     PhoB"
                     /protein_id="HEX2726966.1"
                     /translation="EESLTLLLRYNLEAAGYDVESVARGDEADLRIREQAPDLVLLDW
                     MLPGLSGMELCRRIRAREDTAGLPVIILTARGEEADRVRGLATGADDYIVKPFSVPEL
                     LARVRALLRRANPATLANRLMVGDIDLDRETWRVRRAGEELHLGPTEFKLLEFLMQSP
                     GRVFSREQLLDKVWGHGVYIDERTVDVHIGRLRKAIGRDGQPDPIRTVRGAGYAFDET
                     YMQSA"
     gene            702..1241
                     /locus_tag="VHN20_14205"
     CDS             702..1241
                     /locus_tag="VHN20_14205"
                     /EC_number="1.20.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009338245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030612 - arsenate reductase (thioredoxin)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase ArsC"
                     /protein_id="HEX2726967.1"
                     /translation="MVDPVRNVLFLCTGNSARSILAEGILRKDGAGRFNAFSAGSQPK
                     GTINPFAIKVLGAMDYPTDGCRSKTWDEFALPGAPAMDFVFTVCDQAAGEACPVWPGH
                     PATAHWGIEDPALVEGADIEKERAFVQAAKYLKNRISVFLNLPLASLDALSLERRLKD
                     IGNLEGATSPVPTFDRQAT"
     gene            1238..1948
                     /locus_tag="VHN20_14210"
     CDS             1238..1948
                     /locus_tag="VHN20_14210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015932123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MIP/aquaporin family protein"
                     /protein_id="HEX2726968.1"
                     /translation="MSASPITQEAVGTDFPLSRRVAAEALGTGLLVATVVGSGIMADN
                     LAGGNVAIALLGNTIPTGAILVVLILALASVSGAHLNPAVSLVMGMADSLPWREVGAY
                     AVAQVLGGCVGTLVAHAMFDLPLLQLAGKARTGPAQWFAEFVATFGLILTILMVARFR
                     DAAIPYAVGLYITAAYWFTASTSFANPAVTLARSLTDTFAGIAPNHVIPFAIAQATGA
                     VAGLLVARWMLRQVPERR"
     gene            2157..3371
                     /locus_tag="VHN20_14215"
     CDS             2157..3371
                     /locus_tag="VHN20_14215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018044311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX2726969.1"
                     /translation="MRRSRPLVIAVLGVGQIFGWGSSYYLPAVLAKPIAEDTGWSLPW
                     VVAGLTIGSLAAGLISARVGHGIQARGGRPVMMLGTALLASGLMALGLSQNLTLHLLA
                     WIVIGTGMGCSLYDAAFATLGRLYGQDARRAITHLTLFGGFASTVCWPLSALCLEWLG
                     LGWRATCFAYAAVHLGLVLPLYALVLPGRAEPPKFDASIARTGVGPEIPGATPKRQWM
                     LFGLMATAFSLGWGISSVLSVHLLTILQARGLELAGAVALGALVGPSQVGGRVLEMIF
                     GKHYRPIHTLLISVVLVASGVGLLAANVPMLAFALVAYGAGIGIASIARGTLPLVVFG
                     HERYAVWVGRLAGPALVAGAVSPTLAAGLLDLGGPAVTLCVLEALALVNIGVALLLWS
                     FVRSPNASGTEG"
     gene            complement(3383..>4015)
                     /locus_tag="VHN20_14220"
     CDS             complement(3383..>4015)
                     /locus_tag="VHN20_14220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012321555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase D family protein"
                     /protein_id="HEX2726970.1"
                     /translation="IDMRSYRGPNTDNAQAEPGPETVFLGAEQLAWLKRELINSHATW
                     KVIASDMPLGVIVWNDAQNKKGSEAIAQGDGPALGRELEIANLLSFIKHASVRNVVWL
                     TADVHYTAAHYYDPSRAQFQDFEPFWEFVSGPLHAGTFGPGDLDNTFGPQLRYVKAPA
                     PDQGQNLPPSLGLQFFGHVRIDGNTEQMTVTLKDVADADLFKVTLDPARP"
BASE COUNT          569 a         1312 c         1370 g          764 t
ORIGIN      
        1 cgaggagtcc ctgacgctgc tgttgcgcta caacctggaa gccgccggct acgacgtcga
       61 gagcgtcgcg cgcggcgacg aggccgacct tcgcatccgt gagcaggcgc cggacctcgt
      121 gctgctcgac tggatgcttc cgggcctgtc gggcatggag ctgtgccgcc gcatccgggc
      181 gcgcgaggac accgccggcc tgccggtgat cattctgacc gcgcgcggcg aggaagcgga
      241 ccgggtgagg ggactggcga ccggcgcgga cgactacatc gtcaagccgt tctccgtccc
      301 tgagctgctg gcacgggtgc gggcgctcct gcgccgcgcc aatccggcga ccctggcgaa
      361 tcgactgatg gttggcgaca tcgatctcga ccgcgagacc tggcgcgtgc gccgcgccgg
      421 cgaggaactg catctcggcc ccaccgagtt caagctgctc gaattcctga tgcagagccc
      481 cggccgcgta ttctcgcgcg agcagctgct cgacaaggtc tggggccacg gcgtctacat
      541 cgacgagcgc actgtcgacg tccatattgg ccggctcagg aaggccattg gccgggatgg
      601 tcaaccggat ccgatccgca ccgtccgcgg cgccggctat gccttcgacg aaacgtatat
      661 gcaatcggct tgaggaagcg gccgggcaaa ggggcgtgat gatggtcgat ccggtccgca
      721 acgttctctt cctgtgtacc ggcaattcgg cgcgctcgat cctggccgaa ggtatcttgc
      781 gcaaggatgg ggcagggcgg ttcaatgcgt tctcggccgg cagccagccg aagggaacga
      841 tcaatccgtt cgcgatcaag gtactgggtg cgatggacta tccgacggat ggctgccgct
      901 ccaagacatg ggacgagttc gcactacctg gcgcgccggc gatggacttc gtcttcacgg
      961 tctgcgacca ggccgccgga gaggcgtgcc cggtatggcc cgggcacccc gcgacggcgc
     1021 actggggcat cgaggatccg gccctcgttg aaggtgcgga tatcgagaag gaacgcgcct
     1081 tcgtgcaggc cgccaaatac ctcaagaaca ggatttccgt gttcctgaac ctgccgcttg
     1141 cttcgctcga tgcgctgtcg ctcgagaggc ggctcaagga catcggcaac ctggaaggtg
     1201 cgacatcgcc ggttccgacg ttcgaccggc aagcgacgtg agcgcgagtc cgatcacgca
     1261 ggaagccgtc gggaccgact tcccgctctc gcgccgcgtt gcggcggaag ctctcggcac
     1321 cggcctgctg gtcgctaccg tcgtcggctc cggcatcatg gcggataatc tcgcaggcgg
     1381 gaacgtcgcc atcgcgctgc tcggcaacac cattccgacc ggcgccattc tcgtcgtgct
     1441 gatcctggcg ctcgcctcgg tctcgggcgc ccacttgaat ccggccgtgt cgctggtcat
     1501 ggggatggcc gattccctgc cctggcggga ggtcggcgcc tacgcggtcg cccaagtcct
     1561 gggcggctgt gtcggaacgc ttgtcgccca cgccatgttc gacttgccct tgcttcaact
     1621 cgccggtaag gcgcgaacgg ggccggcaca atggtttgcg gagttcgtcg ccacattcgg
     1681 cctcatcctc acaatcctca tggtcgcgcg atttcgcgat gcggccattc cttatgcggt
     1741 cggtctctat ataacggcgg cctattggtt caccgcatcg acatccttcg ccaatcccgc
     1801 cgtcacgctc gcccgctcac tgaccgatac gttcgccggc atcgctccca accacgtgat
     1861 tcctttcgcc atcgcgcaag cgaccggagc ggtggcgggc ctccttgtgg ctaggtggat
     1921 gttgcggcag gtgccggagc gacgctgacg cacttggtca cgaggttggg ggattgcggg
     1981 gccatgcgtt ccttgcaaaa ccgacgcgat tttacgtgag tggcacggct cgtttttgcg
     2041 agagtcggcc gttggacacg cgcgggtccc ctctttcatc tgacgcacca acactcttag
     2101 atgggctgga agggaaatgt gggcggggga gttatcgttt gagagcggat ctgccggtgc
     2161 ggcggtcacg cccgctcgtg atcgccgtcc tcggcgtcgg ccagatcttt ggctggggat
     2221 catcgtatta cctgccggcc gttctcgcga agccgatcgc ggaggacacg gggtggtcgc
     2281 tgccgtgggt cgttgcgggg ctgaccatcg gctcgctcgc ggccggactc atctcggctc
     2341 gcgtcggtca cggcattcag gcccgtggcg gcaggccggt catgatgctc ggcaccgcgc
     2401 tgctcgcctc agggctgatg gcgctcggac tgagccaaaa cctgacgctg catctccttg
     2461 cctggatcgt gatcggcacc ggcatggggt gcagcctgta tgacgcggcg ttcgccaccc
     2521 tcggccgcct ctacggccag gacgctcgcc gggcgatcac gcatctgacg ctgttcggcg
     2581 gcttcgccag cacggtctgc tggcccctga gcgccctgtg cctcgaatgg ctggggctgg
     2641 gctggcgcgc gacgtgcttt gcctacgctg ccgtgcatct cggtctcgtg ctgccgcttt
     2701 acgcgcttgt cctcccgggg cgagcggagc cgcccaaatt cgatgcttcg atcgcgcgga
     2761 cgggcgtcgg acctgagata cctggcgcca cgccgaagcg gcagtggatg ctgttcgggc
     2821 tcatggcgac ggcgttcagc ctcggctggg ggatctcgtc ggtcttgtcg gtccatctcc
     2881 tgaccatcct tcaggcgcgc ggactggagc ttgcgggcgc cgtcgcgctc ggtgcgctgg
     2941 tcggaccctc gcaggtcggc gggcgggtgc tcgagatgat attcggcaag cattatcgcc
     3001 cgatccacac gctgctgatc tccgtcgtgc tggtcgctag cggggtcggc ctcttggccg
     3061 ccaatgtccc gatgcttgcg tttgcgctcg tcgcatacgg cgccggaatc gggattgcct
     3121 cgatcgcgag gggcaccttg ccgctcgtgg tcttcgggca cgagcgctac gcggtctggg
     3181 tcgggcggct cgcagggccg gcgctggtcg cgggcgcggt gtcgccgacg ctcgcggccg
     3241 gcctgctcga tctcggcggg ccggccgtta cgctctgcgt gctcgaagcc ctggcgctcg
     3301 tgaacatcgg cgtggcgctg ctgctctggt cgtttgtccg gagccccaat gcgtcaggaa
     3361 ccgaaggctg atgccgccgc gcttacggcc gcgccgggtc gagcgtgacc ttaaacaggt
     3421 ccgcgtcggc gacgtccttg agggtcacgg tcatctgctc cgtgttgccg tcgatgcgca
     3481 catggccgaa gaactgcagc ccgagcgacg gcggcaggtt ctggccctgg tccggcgccg
     3541 gcgccttcac gtatctgagc tgcgggccga aggtgttgtc gagatcgccc gggccgaagg
     3601 tgccggcgtg cagcgggccc gagacgaatt cccagaacgg ctcgaaatcc tggaactgcg
     3661 cgcggctcgg gtcgtaataa tgcgccgccg tgtaatgaac gtcggccgtc agccacacca
     3721 cgttcctgac gctggcatgc ttgatgaacg agagcaggtt ggcgatctcg agctcgcggc
     3781 cgagcgccgg cccatcgccc tgcgcgatcg cctccgagcc cttcttgttc tgggcgtcgt
     3841 tccacacgat gacgccgagc ggcatgtcgg atgcgatcac cttccaggtg gcgtgcgagt
     3901 tgatcagctc gcgcttgagc caggcgagct gctcggctcc gaggaacacc gtctcgggcc
     3961 ctggctcggc ctgcgcattg tccgtgttgg gcccgcggta gctgcgcatg tcgat
//
LOCUS       DATAIQ010000867         5979 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_45145, whole genome shotgun sequence.
ACCESSION   DATAIQ010000867 DATAIQ010000000
VERSION     DATAIQ010000867.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 5979)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5979)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5979
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_45145"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..462)
                     /locus_tag="VHN20_14225"
     CDS             complement(<1..462)
                     /locus_tag="VHN20_14225"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015888206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-transferase"
                     /protein_id="HEX2726971.1"
                     /translation="MARFASLTEAVAELVRDGDMVAMEGFTHLIPYAAGHEVIRQGRK
                     RLTLVRMTPDLIYDQLIGMGCAEKLIFSWGGNPGVGSLHRLRDAVENGWPNPLALEEH
                     SHAAMANAYEAGAANLPFAVFRGYKGADLPKVNASIRTVTCPYTAEVLATVP"
     gene            796..1695
                     /gene="pqqB"
                     /locus_tag="VHN20_14230"
     CDS             796..1695
                     /gene="pqqB"
                     /locus_tag="VHN20_14230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012453680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0018189 - pyrroloquinoline quinone
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline quinone biosynthesis protein
                     PqqB"
                     /protein_id="HEX2726972.1"
                     /translation="MRILVLGSAAGGGCPQWNCRCPVCDLAWAGDRRVRPRTQASIAV
                     SADGVRWLLLNASPDLRQQIIATRELQPRAPGRHSPIGAVALTNADVDHVAGLLALRE
                     RQSFAIYASRPVLRVLRENSIFRVLDPTLVARVPVTLEQPIETGLGLQLAAFAVPGKV
                     ALHQETGDVDIGREGDETIGFRVTGAGASFFYVPGCAAVTPGLLERLRGADLVFFDGT
                     TYDDDEMVRLGLSEKTARRMGHVAMNGPDGSLARFAAQPIRRKIYIHINNSNPALVED
                     SVERRTIEAAGWEIAFDGMEVVL"
     gene            1704..2423
                     /gene="pqqC"
                     /locus_tag="VHN20_14235"
     CDS             1704..2423
                     /gene="pqqC"
                     /locus_tag="VHN20_14235"
                     /EC_number="1.3.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011502450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0018189 - pyrroloquinoline quinone
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline-quinone synthase PqqC"
                     /protein_id="HEX2726973.1"
                     /translation="MSADELEAALRRIGKSRYHNLHPFHRRLHGGQCTRAEVQAWALN
                     RYFYQAMIPIKDATVLTRMDDPALRREWRRRIVDHDGREDGDGGIARWLKLTAGLGLD
                     REYVVSTKGILPATRFAVEAYVNFCRTRSLLEAIASSLTELFSPPIIEERVGGMLRHY
                     DFVTPETLAYFTARPPQAQRDSDFALGYVREHARGPDDQDKVMRALEFKCDVLWVQLD
                     ALWHAYVEGHVPPGAWTPEAA"
     gene            2423..2713
                     /gene="pqqD"
                     /locus_tag="VHN20_14240"
     CDS             2423..2713
                     /gene="pqqD"
                     /locus_tag="VHN20_14240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020178243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_process: GO:0018189 - pyrroloquinoline quinone
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline quinone biosynthesis peptide
                     chaperone PqqD"
                     /protein_id="HEX2726974.1"
                     /translation="MSEAAAPPDDRAKPRLPKGVRLRHDEGRGEWLLLAPERVLRPDA
                     VAVEILKRCDGERTIRAIVDDLAATFVADRALIDRDVRALLGDLAAKRVLDL"
     gene            2710..3810
                     /gene="pqqE"
                     /locus_tag="VHN20_14245"
     CDS             2710..3810
                     /gene="pqqE"
                     /locus_tag="VHN20_14245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012386226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0018149 - peptide cross-linking [Evidence
                     IEA];
                     GO_process: GO:0018189 - pyrroloquinoline quinone
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline quinone biosynthesis protein
                     PqqE"
                     /protein_id="HEX2726975.1"
                     /translation="MNAPAPPLGLLAELTHRCPLGCPYCSNPLELEGRDRELDTATWK
                     RVLSEAAALGVLHVHLSGGEPTARRDLAEIVRHCAEAGLYTNLITSGIGLTEARVAEL
                     LQAGLDHVQLSIQDAEPVSADRIAGYEGAFARKRDVARWVTATGTPLTVNAVIHRANV
                     SRAGAMVELAIALGARRVEIAHTQYYGWALRNRPALMPSRAEAEAAIAEVERLKALHA
                     ATIVIDHVLPDYHARYPKACMGGWGRRILNIVPSGKVLPCHAAETIPGLEFWTVHDHS
                     LSEIWHASPAFQAFRGTDWMREPCRSCDRREIDFGGCRCQAMALAGDARAADPACHLS
                     PHHAAITEALREAVPGDMPYVYRRMAPRPVDA"
     gene            3942..5183
                     /locus_tag="VHN20_14250"
     CDS             3942..5183
                     /locus_tag="VHN20_14250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018273075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HEX2726976.1"
                     /translation="MRRHRRISLVLAGATALAACTSGFAVAQQAPAPGAAPGAPPAPP
                     SWAQGRTGGQAASALAPHNAPLTAKNPEEIPVHKIKVPQGFEVTLWASGMPNARSMAV
                     GEKGTLFVGSRLVGRVYAVVEKDGKREVKTIAQGLHRPNGVAVKDGALYVAELSRVVR
                     FDDIENRLDNPPEPKVVYDDLPKDEPHGWKFIAFGPDGMLYVPVGAPCNICDPPATHA
                     QIRRIKPDGSGAEVVARGVRNTVGFDWHPDTRELWFTDNGRDWLTNNQPEEELNRVTK
                     VGQHFGFPACHAGTVVDPEFGKGKTCDEYERPVALLGPHAAALGMRFYTGSMLPAEYK
                     NRIFVARHGSWNRERKEGYDVLLVTPQEKGLALVETFAHGWLEGDNFWGRPVDVHVMR
                     DGSLLVSDDWNGAIYRIAHKH"
     gene            5228..5806
                     /locus_tag="VHN20_14255"
     CDS             5228..5806
                     /locus_tag="VHN20_14255"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEX2726977.1"
                     /translation="MNHHSYATLVAGALLFTPAAAADAARGQEMAAACAGCHGDNGNS
                     KTENVPSLAGHPAPYLVVQLILFREQQRHNDVMTPLAKALSDQDIENLAAYFSKHQRV
                     PADAPLVSPKADRGKTIADAGRCGACHLPDYSGREQIPRLAAQREDYLVKTMRDYKAG
                     KRSGLDGMMTSVLYNYADDDLAALAAYLARLP"
BASE COUNT          938 a         2061 c         2004 g          976 t
ORIGIN      
        1 cggcacggtc gccaggacct cggccgtata ggggcacgtg acggtgcgga tgctggcgtt
       61 gaccttcggc agatcggcgc ccttgtagcc gcggaacacc gcaaaaggca ggttcgcggc
      121 gccggcctcg taggcattgg ccatggcggc gtgcgagtgc tcctccagcg ccagcggatt
      181 gggccagccg ttctcaaccg cgtcgcggag gcggtgcagg gagccaacgc cggggttgcc
      241 gccccatgag aagatcagct tctcggcgca gcccatgccg atgagctggt cgtagatcag
      301 gtccggcgtc atgcgcacga gggtcaggcg cttgcgcccc tggcggatca cctcgtggcc
      361 ggcggcgtac gggatgaggt gcgtaaatcc ttccatcgcg accatgtcgc cgtcgcgcac
      421 cagctcggcg accgcctcgg tcagcgaagc aaaacgagcc aaagttgaat ctcctgtctt
      481 cggtcgggcg cttctttgca cattatcgtg agcgccagca atggcacgcg gcgcacccct
      541 tttcccctcg gaaacgcgcc ctggcggctt cgtacgggga gcccgcgcgg caaaagcggc
      601 tctggcgcgt tccggtgggg taagctatcg tggttaacgc gccgccccag ccgtctggag
      661 cggcccgaac gggagggacg acatggcttg gacgacccca cgggtggtgg aagtttgcgt
      721 cggcatggaa gtgacgagct acgaatccgc tgagtagctg gtcgacacca ttgattgcct
      781 gatcgattga tgtcgctgcg gatcctcgtt ctcgggtccg cggccggggg cggctgtccg
      841 caatggaatt gccggtgtcc cgtttgtgat ctggcctggg cgggcgaccg gcgggttcgc
      901 ccgcgcaccc aggcgagcat cgcggtgagc gccgacggcg tgcgctggct gctcctcaat
      961 gcctctccgg acctgcgcca acagatcatc gccacccgcg agttgcagcc gcgcgcgccg
     1021 ggccggcaca gcccgatcgg cgccgttgcc ctcaccaatg ccgatgtcga ccatgtcgcg
     1081 ggccttctgg cgctgcgcga gcgccagagc ttcgcgatct atgccagccg accggtgctg
     1141 cgggtgttgc gcgagaattc gattttccgg gtgctcgacc cgacgctggt cgcgcgcgtc
     1201 cctgtaactt tggagcagcc catcgagacc gggctcggcc ttcagctcgc ggccttcgcc
     1261 gtccccggca aggtggccct gcatcaggaa accggtgacg tcgatatcgg ccgcgaaggc
     1321 gacgagacca tcggcttccg tgtcaccgga gccggcgcga gcttcttcta cgtgccgggc
     1381 tgcgcggccg tcacacccgg gctgctcgag cgcctgcgcg gcgccgatct cgtcttcttc
     1441 gatggcacca cgtatgacga cgacgagatg gtgcgcctcg gcctgtccga gaagaccgcg
     1501 cgtcgcatgg gacacgtcgc catgaacggc ccggacggat cgctggcgcg ctttgccgcc
     1561 cagccgatca ggcgcaagat ctacatccac atcaacaaca gcaatcccgc cctggtcgag
     1621 gattcggtgg aacgccgcac gatcgaggcg gccggctggg aaatcgcctt tgacggcatg
     1681 gaggtggtgc tgtgagccgg acaatgtcgg ccgacgagct cgaggcggcc ctgcgccgga
     1741 tcggcaaaag tcgctaccac aacctgcacc cgtttcaccg ccggctgcat ggcggtcaat
     1801 gcacccgcgc cgaggtccag gcctgggccc tgaaccgcta tttctaccag gccatgatcc
     1861 cgatcaagga cgccaccgtc ctgacgcgca tggacgatcc ggccttgcgg cgcgaatggc
     1921 ggcggcgcat cgtcgatcat gacgggcgcg aggacggcga cggcggcatc gcgcgctggc
     1981 tgaagctcac cgccggcctc ggcctcgatc gtgaatacgt ggtctcgacg aaaggcatcc
     2041 tgcccgcgac ccggtttgcc gtcgaggctt acgtcaattt ctgccgcacc cgctcgttgc
     2101 tcgaggcaat cgcctcctcc ctgacagagc tgttctcgcc gccgatcatc gaggagcgcg
     2161 tcggcggcat gctccggcat tacgatttcg tcacccctga aacgctcgcc tatttcaccg
     2221 cccgcccgcc gcaggcgcag cgcgactccg acttcgcttt gggctatgtt cgggagcacg
     2281 cccggggccc ggacgaccag gacaaggtca tgcgcgcgct cgagttcaaa tgcgacgtgt
     2341 tgtgggtgca gctcgacgcg ctgtggcatg cctatgtcga gggtcacgtg ccgccaggcg
     2401 cgtggacacc ggaggcggcg tgatgagcga ggccgctgcc cctcccgacg atcgagcgaa
     2461 gccgcgcctg ccgaagggcg tgcgcctgcg ccacgacgaa ggccgcggcg agtggctgct
     2521 gctcgccccg gagcgggttt tgcgccccga cgcggtggcc gtggagatcc tgaaacgctg
     2581 tgacggcgag cgcaccatcc gcgccatcgt cgatgacctc gccgcgacct tcgtcgccga
     2641 ccgggcgctc atcgaccgcg acgtccgggc gctgctcggc gatctcgcgg ccaagcgggt
     2701 gctggacctg tgaacgcgcc ggcgcccccg ctcgggcttc tggcggagct cacgcatcgc
     2761 tgcccgctcg gctgccccta ctgctccaac ccgctcgagc ttgaagggcg cgatcgcgag
     2821 ctcgacactg cgacgtggaa gcgtgtgctg tcggaagcgg ccgccctcgg cgtgctgcat
     2881 gtccatcttt cgggcggaga gcccacggcc cggcgcgacc tcgccgagat cgtgcgccac
     2941 tgcgccgagg ccgggctcta caccaacctg atcacgtcgg ggatcggtct gaccgaggcg
     3001 cgcgtggcgg agctgctcca ggcagggctc gaccacgtgc agctgtcgat ccaggacgcc
     3061 gagccggtct cggccgatcg catcgccggc tatgagggtg cctttgcgcg caagcgcgac
     3121 gtcgcgcgct gggtcaccgc gacgggcacg ccgctcaccg tcaatgccgt catccaccgg
     3181 gcgaacgtgt cgcgtgccgg ggcgatggtg gagctcgcga tcgcgctcgg cgcccgccgg
     3241 gtcgagatcg cgcacacgca gtattacggc tgggctttgc gcaatcggcc ggccctgatg
     3301 ccgtcgcggg ccgaggctga ggcggccatc gccgaggtcg aacgcttaaa ggccctgcac
     3361 gccgcgacga tcgtgatcga tcacgtgctg ccggattacc acgcgcgcta tccgaaagcc
     3421 tgcatgggcg gctggggccg ccgcatcctc aacatcgtgc cgtccggcaa ggtgctgccg
     3481 tgtcacgccg cggagacgat tcccggcctc gaattctgga ccgtccacga ccacagcctg
     3541 tccgagatct ggcacgcgtc gccggccttc caggccttcc gcggcacgga ctggatgcgt
     3601 gagccgtgcc ggtcctgcga ccgccgggag atcgacttcg gcggctgccg ctgccaggcg
     3661 atggcgctag ccggcgacgc ccgcgcagcc gatccggcct gccatctctc gccgcatcac
     3721 gcggccatca ccgaagcgtt gcgcgaggct gtgccaggcg atatgccgta tgtctaccga
     3781 cgcatggcgc ctcgcccggt cgatgcatag gcgctggcgt cgctgcagcg acgccagcgc
     3841 cgccgcgcgg gggcgacgct gcgcccgcaa agaatgtcgg gcttggcacg ccgcgcgaac
     3901 aagagcagtc tcaccggcaa gatcaatcag ggaggtaacg catgcgtcga catcgtcgga
     3961 tttcgctcgt tctcgcggga gctaccgcgc tcgcggcctg cacgtcgggc ttcgccgtcg
     4021 cgcagcaggc gcccgcgcca ggtgccgcgc cgggcgcgcc gccggcgcct ccctcctggg
     4081 cgcaaggccg cacgggcggc caggcggcct cggcgctggc gcctcataat gcgccgctga
     4141 cggccaagaa cccggaggag atcccggtcc acaagatcaa ggtgccgcaa ggtttcgagg
     4201 tcactctatg ggcgagcggc atgcccaatg cacgttccat ggcggtgggc gagaaaggca
     4261 cgctgttcgt cggctcgcgt ctggtcggcc gcgtctacgc cgtcgtcgag aaggacggca
     4321 agcgcgaggt caagacgatc gcgcaaggct tgcatcgccc caacggcgtc gccgtcaagg
     4381 acggcgccct ctatgtcgcc gagctcagcc gggtggtgcg tttcgacgac atcgagaacc
     4441 ggctcgacaa tccgcccgag ccgaaagtcg tctacgacga tctgccaaag gacgagccgc
     4501 atggctggaa gttcatcgcc ttcggccctg acgggatgct ctatgtgccg gtcggcgcgc
     4561 cgtgcaacat ttgcgatcct ccggccacgc acgcgcaaat ccgccgcatc aagccggacg
     4621 gcagcggcgc cgaggttgtc gcgcgcggcg tgcgcaacac ggtcgggttc gactggcatc
     4681 ccgacacgcg cgagctttgg ttcaccgaca acggccgcga ctggctcacc aacaaccagc
     4741 ccgaggagga gttgaaccgc gtcaccaagg tcgggcagca tttcggcttc ccggcctgtc
     4801 atgcgggcac cgtggttgac cccgagttcg gcaagggcaa aacgtgcgac gaatacgagc
     4861 ggccggtggc gttgctcggg ccgcacgcgg cggcgctcgg catgcgcttc tatacgggca
     4921 gcatgttgcc ggccgaatac aagaaccgca tcttcgtcgc tcggcacggc tcctggaatc
     4981 gcgagcgcaa ggaaggctat gacgtgcttc tggtgacgcc gcaggagaaa ggcttggctc
     5041 tcgtggagac atttgcccac ggctggctcg agggcgacaa tttctggggc cgcccggtcg
     5101 acgtgcacgt gatgcgcgac ggctcgctcc tcgtctccga cgactggaac ggcgccatct
     5161 accgtatcgc gcacaagcac tgaccatttg gccgccggtc atccggcggc ctcctcccct
     5221 tcccgctatg aaccatcatt cctatgccac gctcgtcgcg ggcgcgttac tgttcacgcc
     5281 ggcggccgcc gccgatgctg cgcgtgggca ggagatggcg gccgcttgcg cggggtgtca
     5341 cggcgacaac ggcaactcga agaccgagaa cgtcccgtcg ctggcaggtc atccggcgcc
     5401 gtatctcgtg gtgcagttga tcctgttccg cgagcagcag cggcacaacg acgtcatgac
     5461 accgttggcg aaagcgcttt cggaccagga tatcgagaat ctggcggcct atttttccaa
     5521 gcatcagcgc gtcccggcag atgcgcctct tgtctcgccg aaggctgatc gcggcaagac
     5581 gatcgccgat gcgggccgct gcggtgcatg ccaccttcct gattattccg gccgcgagca
     5641 gattccgcgc cttgccgcgc aacgcgagga ttacctcgtc aagaccatgc gtgactacaa
     5701 ggccggcaaa cgctccggcc tcgacggcat gatgacgagc gtcctctaca actacgccga
     5761 cgacgatctc gccgccctcg ccgcctacct ggcgcggctg ccgtgaccgt ctcctctacc
     5821 cactttcggg aagaggccga gtctgcagag cagaccgggt gagagccgcc ctcaccttcg
     5881 cccttcggtc tcgctgcggc cgccggtgcg gtcgcagccc tctcccgcaa gcggggagag
     5941 gagctcatga cggcacctgt tacggcagcc cgagcaggc
//
LOCUS       DATAIQ010000868         2031 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_342896, whole genome shotgun sequence.
ACCESSION   DATAIQ010000868 DATAIQ010000000
VERSION     DATAIQ010000868.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2031)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2031)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2031
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_342896"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            37..1053
                     /locus_tag="VHN20_14260"
     CDS             37..1053
                     /locus_tag="VHN20_14260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019403667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HEX2726978.1"
                     /translation="MALPDFSMRQLLEAGAHFGHQAHRWNPKMSQYIFGTRNNIHIID
                     LAQTVPMLYRALQAVSDTVSKGGRVLFVGTKRQASDSVADAAKRSAQYYVNSRWLGGM
                     LTNWKTISASIQRLRKLDEILTGGGPGLTKKERLMLSREKEKLEKALGGIKDMGGTPD
                     LLFVIDTNKEQLAIKEARRLGIPVAAIVDTNCNPDGIAFPVPANDDAGRAITLYCDLI
                     ARAAIDGISRSQGELGVDIGAAEKPVIEELPAANTNVADEQTENFEQLAAPRGAPDDL
                     TKLTGVGPQLEKKLNDAGIYHYWQLAAMKPDDIARVDRDLKLHGRIERDNWISQSRGL
                     IEAA"
     gene            1147..>2031
                     /gene="tsf"
                     /locus_tag="VHN20_14265"
     CDS             1147..>2031
                     /gene="tsf"
                     /locus_tag="VHN20_14265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008961414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor Ts"
                     /protein_id="HEX2726979.1"
                     /translation="MANISAAMVKDLRDKTGAGMMDCKAALAETGGDVEAAVDWLRKK
                     GLAKAAKKAGRVAAEGLVAVESAGHTAAIVEVNSETDFVARNDQFQAFAREAAKIALM
                     TDGTVPALEAARVPGSQTTVKDRLQELVATIGENMNLRRVTRLQVGKGVIASYVHNAV
                     AEGLGKIGVLVALESPGNVDQLAALGRQLAMHVAAMSPLALDAAAIPAATIERESAIL
                     REKNAGKPDHVLQKIVDSGLKSFYKEATLLDQAYVHEASKSVSQVLKEAEGRVGGPVK
                     ITGFVRYALGEGIEKEESD"
BASE COUNT          390 a          670 c          675 g          296 t
ORIGIN      
        1 ctcccgcgtc cgcggcggct ttaaccggag aataccatgg cgcttcccga cttctcgatg
       61 cgccagctgt tggaggctgg cgcgcacttc ggccatcagg cccaccgttg gaacccgaag
      121 atgtcgcaat acattttcgg cacccgcaac aacatccaca tcatcgacct cgcccagacc
      181 gtgccgatgc tctatcgcgc cttgcaggcc gtgagcgaca cggtttccaa gggcgggcgc
      241 gtcctgttcg tcggaaccaa gcggcaggcc tcggattcgg tcgccgacgc ggccaagcgc
      301 tctgcgcaat actacgtcaa ctcgcgctgg ctcggcggca tgctgaccaa ctggaagacg
      361 atctcggcgt cgattcagcg cctgcgtaag ctcgacgaga tcctcacggg gggcgggccg
      421 ggcctgacca agaaggaacg cctgatgctc tcccgcgaga aggagaagct cgagaaggcg
      481 ctcggcggca tcaaggacat gggcggcacg cccgatctcc tgttcgtcat cgacaccaac
      541 aaggagcagc tggcgatcaa ggaagcgcgg cgcctgggca tcccggtcgc ggcgatcgtc
      601 gacacgaact gcaatccgga cggcatcgcc ttccctgtgc cggctaacga tgacgcgggt
      661 cgcgccatca cgctctactg cgatctgatc gcgcgcgccg cgatcgacgg catttcgcgc
      721 agccagggcg agctcggcgt cgacatcggt gcggccgaga agcccgtgat cgaggagctg
      781 cccgcggcca acaccaatgt ggccgacgag cagaccgaga acttcgagca gctggccgcg
      841 ccgcgtggcg cgccggacga tctcaccaag ctcacgggcg tcggcccgca gctcgagaag
      901 aagctcaacg acgccggcat ttatcactac tggcagcttg ccgcgatgaa gccggacgac
      961 atcgcccggg tcgatcgcga tctcaagctg cacggccgca tcgagcggga taactggatc
     1021 tcgcaatcgc ggggcctgat cgaagcggcc tgatcccgat gccggcgcgc aggcgaccgt
     1081 aaaacttccg ggcccgggct ttcacgagcg ccgggcctcc ctcatttcag atcgaaagga
     1141 tcagccatgg cgaacatatc ggccgcgatg gtaaaggacc tgcgcgacaa gaccggcgcg
     1201 ggcatgatgg attgcaaggc ggcgctcgcc gagaccggcg gcgacgtcga ggcggcagtc
     1261 gactggctgc gcaagaaggg cctcgccaag gccgccaaga aggccgggcg cgtcgccgcc
     1321 gaaggtctag tggccgtgga gtcggcgggc cacacggccg cgatcgtcga ggtcaactcg
     1381 gagaccgact tcgtcgcccg caacgatcag ttccaggcat tcgcgcgcga ggcggccaag
     1441 atcgcgctga tgaccgacgg cacggttccc gccctcgagg cggcccgcgt tcccggctcg
     1501 cagacgacgg tgaaggaccg cctccaggaa ctcgttgcca cgatcggcga gaacatgaac
     1561 ttgcgccgtg tgaccaggct gcaagtgggc aagggcgtca tcgccagcta cgtgcacaac
     1621 gcggtcgccg agggcctcgg caagatcggc gtgctcgtgg cgctcgagtc gcccggcaat
     1681 gtcgaccagc tggcggcgct cggccgccag ctcgccatgc atgtcgccgc gatgagcccg
     1741 ttggccctcg acgcggcggc gatcccggcg gcgacgatcg aacgcgagtc ggcgatcctg
     1801 cgcgagaaga acgccggcaa gcccgatcac gtcctgcaaa agatcgtcga tagcggtctc
     1861 aagagcttct acaaggaagc gacgcttctc gatcaggcct atgtgcacga ggcgtcgaaa
     1921 tccgtgagcc aggtgctcaa ggaagcggag ggccgcgtcg gcgggccggt gaagattacc
     1981 ggcttcgtcc gctatgccct cggtgaaggc atcgagaagg aagagagcga c
//
LOCUS       DATAIQ010000869         2695 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_460228, whole genome shotgun sequence.
ACCESSION   DATAIQ010000869 DATAIQ010000000
VERSION     DATAIQ010000869.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2695)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2695)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2695
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_460228"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..341
                     /locus_tag="VHN20_14270"
     CDS             <1..341
                     /locus_tag="VHN20_14270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013166016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEX2726980.1"
                     /translation="EDTPDEYRRHTGERAARILASAAAIAAREGVAPNKIHVKEDQPY
                     RAIIAAAEDERCDLIVMASHGRRGISALVLGSETTKVLTHSSVPVLVYRSSNRAHHGR
                     ATTTAAPELV"
     gene            complement(620..1309)
                     /locus_tag="VHN20_14275"
     CDS             complement(620..1309)
                     /locus_tag="VHN20_14275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018268801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX2726981.1"
                     /translation="MHTTLATTAVPAPTDGIRFPAAPLARPARDTVTPAVGATRRLGK
                     DEEVFGEGDRAAYFYKVVSGAVRTSKLLSDGRRQIDAFHLAGDMFGIESGDEHRFSAE
                     AVGDAAVVVYRRCALDTLAAQDGAFAREIVAAMMRALERAQEHMLLLGRKSAIEKIAS
                     FLLDMAERACDNAIELPMSRIDIADHLGLTIETVSRSLTQLERKGLIALPAQRRTIRL
                     RHKAALENLRA"
     gene            complement(1389..1898)
                     /locus_tag="VHN20_14280"
     CDS             complement(1389..1898)
                     /locus_tag="VHN20_14280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012319539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX2726982.1"
                     /translation="MLIRTAPAFETGQAGELADGITFEPTFQESGFAMSPSAGIVIVV
                     DDDAAVRNALRFALELEGFDVRTYESGREMLAEAAVASDGCLVVDQYMPEMTGIDLVD
                     RVHERYPDVPAILITAKATDRLRLAAALSGIRKVLEKPLEGGALFDSINEALTAAPRT
                     RRGDLRETP"
     gene            complement(2057..2683)
                     /gene="fixJ"
                     /locus_tag="VHN20_14285"
     CDS             complement(2057..2683)
                     /gene="fixJ"
                     /locus_tag="VHN20_14285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015316355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0001216 - DNA-binding transcription
                     activator activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0045893 - positive regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator FixJ"
                     /protein_id="HEX2726983.1"
                     /translation="MANDAIVHVVDDDVDVRHSLSFLLATAGLPVRLHESASAFLSAV
                     KEPPSGCILTDVRMPGIDGIELLRRLRARGFSVPVIVMTGHADVPLAVEAMKQGAADF
                     IEKPFDDDLLVAAIRSALAAHGRAAEQAQQAAAVQARFASLSERERQVLAALVAGKPN
                     KVIAHDLGISPRTVEIYRANVMSKMEAGSLSELVRMALQIGDAAIGAA"
BASE COUNT          429 a          876 c          942 g          448 t
ORIGIN      
        1 tggaggacac gcccgatgaa taccggcgcc acacgggcga acgcgccgcg cgcatcctgg
       61 cgtcagcggc ggcgatcgcc gcccgcgaag gggtcgcacc gaacaaaatt cacgtgaagg
      121 aggaccagcc ctatcgggca atcatcgccg ccgccgagga cgagcgctgt gatctcatcg
      181 tcatggcatc gcatgggcgg cgcgggattt cggccctcgt cctcggcagc gagacgacga
      241 aggtgctgac ccattcttcc gttccggtcc tggtttaccg ctcgtcgaac cgggcacatc
      301 atggacgcgc aaccacgact gccgcgcctg agctggtgtg atcccgtcgg gcgccatggc
      361 gatttggtcg cggccgccgc tccattcgat caaaggcgcg ggcgagatcc cttgcttgcg
      421 accggagggg accgtagtca tcgagcatcc aggccgcccc ggccacggac tgggaatcga
      481 cgctctgctg ccggtcagat cgcgcgacgg gccgaggcgc tcggcgcagt cggcgagggc
      541 ggtctggtcg gcgcagtccg ttggttcgta tatcttcgcc cgcacggtcg cgcctgaccg
      601 ctgcggcgcg gatgcagaac taggcccgca agttctccag agccgccttg tggcgcaggc
      661 ggatggtgcg gcgctgggcg gggagggcga tcagcccctt gcgctcgagc tgggtgaggg
      721 agcgcgacac ggtctcgatc gtgaggccga gatgatccgc gatatcgatg cgcgacatcg
      781 gcagctcgat cgcgttgtcg caggcgcgtt cggccatgtc gagcaggaag ctggcgatct
      841 tctcgatcgc cgacttgcgg ccgaggagca gcatgtgttc ctgcgcgcgt tccagcgcgc
      901 gcatcatggc ggcgacgatt tcgcgcgcga aggcgccgtc ttgcgcggcg agcgtgtcga
      961 gggcacagcg gcggtagacc accacggcgg cgtcgccgac cgcctcggct gagaagcggt
     1021 gctcgtcgcc ggactcgatg ccgaacatgt cgccggcaag atggaaggcg tcgatctgcc
     1081 ggcgcccgtc gctgagcagc ttgctggtgc gtacggcgcc ggagacgacc ttgtagaaat
     1141 acgcggcacg gtcgccctcg ccgaagactt cctcgtcctt gccaagccgc cgggtagcgc
     1201 ccacggcggg ggtgacggtg tcccgggccg gtcgggcgag cggtgcggcc ggaaaacgga
     1261 tgccgtcggt gggagccgga acggcggtcg tggcgagtgt ggtgtgcatc ggaccctcgt
     1321 cagtgagtcg ctgaacttgg gaccatcatt acgcccgcac ggcgccgccg aaaattcaga
     1381 tgctttgcct aaggggtttc ccggaggtcg ccgcggcggg tacggggcgc agccgttaac
     1441 gcttcgttga tgctgtcgaa aagggcgccg ccctcgagcg gcttctcgag cacctttcgg
     1501 atgccgctca aggcggccgc gagtcggagg cgatcggtgg cttttgcagt gatcagaatg
     1561 gcgggaacgt cgggatagcg ttcgtgaacc cggtcgacga gatcgatgcc ggtcatctcg
     1621 ggcatatatt ggtcgaccac gaggcagccg tccgaagcca cggccgcctc ggccagcatc
     1681 tcgcggccgc tctcataggt gcgcacgtcg aagccctcga gttcgagcgc gaatcgcaac
     1741 gcgtttcgga ccgcggcgtc gtcgtcgacg acaatcacga tgcccgcgga tggggacatg
     1801 gcaaagcctg attcctgaaa tgtcggctcg aacgttatac cgtccgccag ctccccggct
     1861 tgacctgtct caaacgccgg cgccgttcgg atcagcaatt gtccttatcc cgcgaaagcc
     1921 tgctccacga cttgacccgc ggccggcgcc gcctcgccga ctgaggcttg tctcggtccg
     1981 ccctgcctgc ataggatatt gatccggggc atgcgcgcct cgacagcggg ccccctcctt
     2041 gatgggcagg gtgacgctag gcggcgccga tggccgcgtc gccgatctgc agcgccatgc
     2101 gcaccagctc ggacaggctg ccggcctcca tcttgctcat cacgttggcc cggtagatct
     2161 cgactgtgcg cgggctgatg ccgagatcat gggcgatcac cttgttgggc ttgccggcga
     2221 ccagcgccgc caggacctgc cgttcacgtt ccgacagcga cgcgaaacgg gcctggaccg
     2281 ccgccgcctg ctgagcctgt tccgcggccc gcccgtgtgc cgcgagggcc gaccggatgg
     2341 ccgcgacgag caggtcgtca tcgaacggct tttcgatgaa gtcggcggcg ccctgcttca
     2401 tggcctcgac tgcgagcggc acgtcggcat ggccggtcat gacgatcacc gggacggaga
     2461 agccgcgtgc gcgcaggcgc cgcagcagct cgatgccgtc gatgccgggc atgcgcacat
     2521 cggtgaggat gcagccggaa ggcggttcct tgacggcgct gagaaaggcg cttgcggatt
     2581 catgcagacg cacgggcagg ccggccgtcg cgagcaggaa cgaaagcgag tggcgtacat
     2641 cgacgtcgtc gtcgaccaca tggacgatcg cgtcattcgc catgcgccag ctcct
//
LOCUS       DATAIQ010000870         3380 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_251278, whole genome shotgun sequence.
ACCESSION   DATAIQ010000870 DATAIQ010000000
VERSION     DATAIQ010000870.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3380)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3380)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3380
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_251278"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..756
                     /locus_tag="VHN20_14290"
     CDS             <1..756
                     /locus_tag="VHN20_14290"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF026183.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX2726984.1"
                     /translation="SAAATPAELAARSEALITILTDAKAVDAVYRGASGVLSADIKGK
                     LVIEMSTVQPETETALADEVRAKGATFVECPVGGTTGPARTGKLIGLVGGEAADVARA
                     RPILDQLCRRIEHVGPVGAGASMKLAINLPLLVFYQAMGEAYTLCRHLDLDPVAVMDL
                     FADTSGGPNILKVRGPAIAAALAGGPPAQPTFDVDSIRKDLRTMLAEGKKRGVDLPLV
                     ARALAVYDEASAAGWGGRDGSSLPAFWPNRSAS"
     gene            796..1239
                     /locus_tag="VHN20_14295"
     CDS             796..1239
                     /locus_tag="VHN20_14295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006936646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-binding protein"
                     /protein_id="HEX2726985.1"
                     /translation="MSAITLAQASTIVDAALKKGRELNLAPLTVVVLDAGGHAVALKR
                     EDRSGIMRVDIATGKAWGALGMGFGSRELFERSSKQPIFITVLAAVSQGRMVPVPGGV
                     LIRDAAGDVVGAVGISGDVSDKDEACAVAGIEAAGLKPETGVVAS"
     gene            1258..2238
                     /locus_tag="VHN20_14300"
     CDS             1258..2238
                     /locus_tag="VHN20_14300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012333244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-2-hydroxyacid dehydrogenase"
                     /protein_id="HEX2726986.1"
                     /translation="MTSPLLPDRDKLQICFAHAAYQLGDEFSARNTGMRHFEVRDLGE
                     LQARIGEADVLVVSGLWRNELLERAGRLRFIQSVSAGTDQYARDLLRAKGVRLASAQG
                     ANERAVAEHAIALILALERQLPQARDNQASRTWRGMIANRSRREDELGGKTLVIVGLG
                     RIGSRVAMLARAFGMRVIGIRRSAGAAPDAVDAVVGPDRLLEVLPDADFVALTCPLTP
                     ETEGLIGAPQLSAMKRSAYLINVARGRVVDEAAMLSALQDGRIAGAGLDCFHDEPLPT
                     SSPFWGFANVLITPHTAGETRRYESNVVDLLLDNLERLFSGNPALRNEIV"
     gene            2336..2764
                     /locus_tag="VHN20_14305"
     CDS             2336..2764
                     /locus_tag="VHN20_14305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726987.1"
                     /translation="MTRGKLLFFLAASFLAMDAHAAPKPAECPYPGSVVYDLDKVEEG
                     LKTAPSCDAAFELFSSCMMGSTSDVRMSGFVVEKCEADFEAKLSKGQRRAYDKALNGC
                     ERKYQRQSGSEARAMEALCVAEVARAYSRRSRSTKPPRRS"
     gene            complement(2974..>3380)
                     /locus_tag="VHN20_14310"
     CDS             complement(2974..>3380)
                     /locus_tag="VHN20_14310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019406725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX2726988.1"
                     /translation="RAGAAARARELLARGGVVEHAGRYPANLSGGQQQRVAIARALAM
                     DPEVMLFDEPTSALDPETIGEVLNVMKTLADEGMTMVVVTHEMSFARRVGDWILVFDH
                     GRIVEEGPPRQIFDAPQQERTRDFLSHLGWSG"
BASE COUNT          518 a         1171 c         1188 g          503 t
ORIGIN      
        1 agcgcggctg cgactccagc ggagctcgcc gcgcgcagcg aggcgctcat caccatcctg
       61 accgatgcga aagccgtcga cgcggtctat cgcggcgcgt cgggcgtgct ctcggccgac
      121 atcaagggca agctcgtgat cgagatgagc accgtgcagc ccgagaccga gaccgcgctc
      181 gccgacgagg tgcgggccaa gggcgcgact ttcgtcgaat gcccggtcgg cggcacgacc
      241 gggccggcgc gcaccggcaa gctgatcggc ttggtcggcg gcgaggccgc cgacgtggcg
      301 cgcgcgcggc cgatcctcga tcagctgtgc cgacgcatcg agcatgtcgg cccggtcggc
      361 gccggcgcaa gcatgaagct cgccatcaat ctgccgctgc tcgtgttcta ccaggcgatg
      421 ggcgaggcct acacgctctg ccgccatctc gacctcgacc cggtcgcggt gatggacctg
      481 ttcgccgaca cgtccggggg acccaacatc ctgaaggtgc gcgggccggc catcgccgcg
      541 gcgctggcgg gcggcccgcc ggcccagccg accttcgacg tcgactcgat ccgcaaggac
      601 ctgcgcacca tgctggctga gggcaagaag cgcggcgtcg acctgccgct cgtggcgcgc
      661 gcgctcgccg tctacgacga ggcgagcgcc gccggctggg gcgggcgcga cggctcgagc
      721 cttcccgcct tctggccgaa ccgcagcgcc agctgattca gccgcggatc gcgcggcaat
      781 attccggagg ttgtcatgtc ggccatcacc ctcgcccagg cgagcaccat cgtcgatgcg
      841 gctttgaaga aggggcgcga gctgaacctc gcccccctca ccgtcgtcgt gctcgacgcc
      901 ggcggccacg ccgtggcgtt gaagcgcgag gaccgctccg gcatcatgcg cgtcgacatc
      961 gccaccggta aggcgtgggg cgcgctcggc atgggcttcg gcagccgcga gctgttcgag
     1021 cgctcgagca agcagccgat cttcatcacc gtgctcgccg ccgtgagcca gggccgcatg
     1081 gtgccggtgc ccggcggcgt gctgatccgc gacgccgctg gcgacgtggt cggcgccgtc
     1141 ggcatctcgg gcgacgtgtc cgacaaggac gaggcctgcg cggtcgccgg catcgaggcc
     1201 gcggggctca agccggagac gggcgtggtg gcgagttagg gctaggttgt cccgaccatg
     1261 acctcccctc tcctgccaga ccgcgacaag cttcaaatct gcttcgcgca tgccgcctat
     1321 cagctcggcg acgagttctc cgcgcgcaat accggcatgc gccatttcga ggtgcgcgat
     1381 ctcggcgagc tgcaggcgcg catcggcgag gccgacgtcc tggtggtctc gggcctctgg
     1441 cgcaacgagt tgttggagcg cgccgggcgc ctgcgcttca tccagtcggt gagcgccggc
     1501 accgaccagt atgcgcgcga cctcttgcgc gcgaagggcg tgcggctggc gagtgcgcag
     1561 ggcgccaacg agcgggccgt cgccgagcac gcgatcgcgc tgatcctggc gcttgagcgg
     1621 cagctcccgc aggcgcgcga caaccaggcg agccgcacgt ggcggggcat gatcgccaac
     1681 cgctcgcggc gcgaggacga gctcggcggc aagacgcttg tgatcgtcgg gctcggccgc
     1741 atcggctcgc gtgtcgcgat gctcgcgcgc gccttcggca tgcgcgtcat cggcatcagg
     1801 cgcagcgccg gcgcggcgcc cgacgccgtc gacgcggtgg tcgggccgga ccgcctgctc
     1861 gaggtcttgc cggacgccga tttcgtcgcc ctcacctgcc cgctgacgcc ggaaacggaa
     1921 gggttgatcg gcgcaccgca actttcggcc atgaagcggt ccgcctatct gatcaacgtg
     1981 gcgcggggcc gggtggtcga cgaggcggcg atgctgagcg cgctccagga cgggcgcatc
     2041 gccggcgccg ggctcgactg cttccacgac gagccgctgc cgacctcctc accgttctgg
     2101 ggcttcgcga acgtcctcat cacgccccac acggcgggcg agacgcgccg ctacgagagc
     2161 aacgtcgtcg acctgctgct cgacaacctg gagcggctat ttagcggcaa cccggcgctg
     2221 cgcaacgaga tcgtctagga gcaatcagac ggcgatccgg cctcgcgagc cggcgtccct
     2281 gacgccagca ccggaagatg ttacactggc cgacgatcct gcacgggagc tgccgatgac
     2341 ccgcggcaag ctgcttttct ttctggcggc ctcgttcctc gccatggacg cgcacgccgc
     2401 gccgaaacct gcggagtgcc cgtatcccgg aagcgtcgtc tatgacctcg acaaggtcga
     2461 ggagggactg aagaccgccc cgtcatgcga cgcagctttc gagttgttca gctcctgcat
     2521 gatgggttcg acgagcgacg tcaggatgag cggcttcgtg gtcgaaaagt gcgaagccga
     2581 tttcgaggcg aagctgagca agggccaacg gcgcgcctac gacaaggctc tgaacggctg
     2641 cgagcggaaa tatcagcgtc agtcgggatc cgaggctcgc gccatggaag cgctatgcgt
     2701 cgccgaagtg gcgcgcgcgt attcacgccg ctcgcgcagc acgaagccgc cacgccgatc
     2761 gtaagagccc gcgagcgcga ggctttcgtc atggccgggc ttgtcccggc ttgtccaggc
     2821 catccacgcc ttcggccgtt gccagatgcg aaaggcggct ggcttcacat ctgccggcgc
     2881 agcgccaatc cacgcgtaag acgtggatgg ccgggccaag cccggccatg acgacaagag
     2941 agcggaccgg atcacacttc aagatcgaag ccgttacccg ctccagccga gatggctgag
     3001 gaagtcgcgg gtgcgctcct gctgcggagc gtcgaagatc tgtcgcggtg ggccttcctc
     3061 gacgatgcgg ccgtggtcga acacaaggat ccagtcgccg acccggcggg cgaagctcat
     3121 ctcgtgcgtg acgaccacca tcgtcatgcc ctcgtcggcg agcgtcttca tgacgttcag
     3181 cacctcgccg atggtctccg ggtcgagggc cgaggtcggc tcgtcgaaca gcatgacctc
     3241 cgggtccatg gcgagcgcgc gggcgatggc gacgcgctgc tgctggccgc cggacaggtt
     3301 cgccgggtag cgtccggcat gctcgacgac gccgccgcgg gcgagcagct cgcgggcgcg
     3361 cgccgcggca ccggcgcgat
//
LOCUS       DATAIQ010000871         5078 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_460302, whole genome shotgun sequence.
ACCESSION   DATAIQ010000871 DATAIQ010000000
VERSION     DATAIQ010000871.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 5078)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5078)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5078
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_460302"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..629)
                     /locus_tag="VHN20_14315"
     CDS             complement(<1..629)
                     /locus_tag="VHN20_14315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018698693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016811 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in linear amides
                     [Evidence IEA];
                     GO_process: GO:0006672 - ceramide metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ceramidase domain-containing protein"
                     /protein_id="HEX2726989.1"
                     /translation="MNLSAYCERLDAGFWAEPFNAVTNLAFFAAALAAWRLWRRDDRR
                     DRPVLVLIGLAALIGVGSFLFHTMPARWSALADVIPIQLFAFGYFCLAMRRFLGLGAC
                     AAAIATVAFVAASFALQRGLGPLLPPGARGSAAYASFVIALFATAWLVRRRVGVGAGT
                     SSAAALAFAGVLFALSLTLRSIDQAVCAALPVGTHFLWHLLNAGVVFGLL"
     gene            713..1003
                     /locus_tag="VHN20_14320"
     CDS             713..1003
                     /locus_tag="VHN20_14320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726990.1"
                     /translation="MDPFDRDQRQLIRVERWGAPGGILAVTVTLAELCREAVNRYGDD
                     WPRIERLIALRGDELPADERLRLDADVARILGFRAPAARAGALAEPAKPARN"
     gene            1030..1536
                     /locus_tag="VHN20_14325"
     CDS             1030..1536
                     /locus_tag="VHN20_14325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018009792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726991.1"
                     /translation="MTRRTIVVEDAMQRDYRYELSAPVGRDFDPAFRPDLSPAQMLRL
                     GVFGGKYMTDCRDEFPKSWFAGARLSPGRRDPALNFFGVDASQPLSVWRAKGWIHPDD
                     PRGWFQWYCRYYRGRRMEDDARQIGRWLRMRRHVRQIERHCEKGDLFCRRRQRQALLH
                     WAYDSRLI"
     gene            2033..2386
                     /locus_tag="VHN20_14330"
     CDS             2033..2386
                     /locus_tag="VHN20_14330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726992.1"
                     /translation="MILNRILLSLVPALLALLLAAGVVELGTAFDSDVGITDGGPLKG
                     RGSPNRLIAVRTIFIPGLFEDQDTEDRPSLKAPAGSGWVAEQGAGSEVAMPTSRTGPS
                     CVWRCATPPRGPPLA"
     gene            2490..4598
                     /locus_tag="VHN20_14335"
     CDS             2490..4598
                     /locus_tag="VHN20_14335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007759285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HEX2726993.1"
                     /translation="MESVVGELAFMGGAASKALFILLEPERLMFLGLGCIMGLVLGIV
                     PGIGGLAGTAMLLPFTFTMDPYSAFALLLGLGATTATGDPIPAVLFGVPGGAASAATV
                     LDGFPMAKRGEAGRALSAAYMSSLMGGIFGAALLAITIPILRPVMLYIGSPELLAFSV
                     LGISMVAILSGNAPLRGLTAGCFGVMLAMIGSDPQTGTLRWTFNSLYLWEGLPLTPLL
                     LGLFALPELCDLLISRTAIAQGVTNKDIYKGQWQGVKDCFQNWWLILRCSWIGGGIGS
                     IPGISASVVDWLAYGHALKTEKGASQTFGKGDVRGVIASESSNNAKEGGALVPTVAFG
                     VPGSASMAILLGAFLIHGLVPGPDMLHKNLDVTYSMVWSVALANIVGAGACYAFSPQF
                     AKLATLRYTLILPAVLGIVYIGAFEASRQWQDMFSLLGFGVLGWVMKQFRWPRPPLVL
                     GVVLGDSIERYLFISVERYGIAWFARPVVAILFAIAIIGLIRPFLHDVRIHGGFKRMV
                     TEFQAPTFRYGQAFTLFMLAVIAGLLALSMDWNFSARIVPTVVGITALTACGLSLFND
                     LCRKPEALKTESLAEQAIHQVEGQMGSQEAGKIHMDLTSDTDHLPVRTIVTRAGIFFA
                     YLLGFMAVMSVIGLIPTAFLFVIVFMRMEGPERWKIVLPYAVILVTGIYIAFDQVMSV
                     PWPPTLLGTWFPAAKVIPSV"
     gene            4775..4975
                     /locus_tag="VHN20_14340"
     CDS             4775..4975
                     /locus_tag="VHN20_14340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726994.1"
                     /translation="MATMKKLARFAAEPSDGGARLTIEAEDGATFEIEADFDQLEDLA
                     DTLDDILSANEDALEVKDEAST"
BASE COUNT          831 a         1689 c         1686 g          872 t
ORIGIN      
        1 aggagcccga acaccacgcc cgcgttgagc aggtgccaga ggaaatgcgt gccgaccggc
       61 agggccgcgc acactgcctg gtcgatcgac cgcaaggtca gcgacagggc gaacagcacg
      121 ccggcaaacg ccagcgcggc cgcagacgat gtgccggcgc ccacccctac ccggcgccgg
      181 acgagccatg cggtcgcgaa cagggcgatg acgaacgagg cataggccgc ggatccccgc
      241 gccccgggcg gcagcagcgg gccgagcccg cgctgcagcg cgaaggacgc ggcgacgaag
      301 gccacggtcg cgatagcggc ggcgcacgcg ccgagcccga ggaagcggcg catggcgagg
      361 caaaagtagc cgaaggcaaa gagctggatc gggatcacgt cggcgagggc gctccagcgc
      421 gccggcatgg tgtggaacag aaagctcccc acgccgatca gggccgccaa gccgatcagc
      481 acgagcaccg gccgatcgcg tcgatcgtcc cgccgccaca ggcgccatgc cgccaaggcc
      541 gcggcgaaaa aggcgaggtt ggtgacggca ttgaacggct cggcccagaa gccggcgtcg
      601 agccgctcac aataggccga caggttcatg aacctcgccc ttgaggaaga gagttgccgg
      661 ttcggcgaac gtcttggttg cttctgcccg ggccatgatc aattttaggg caatggaccc
      721 gttcgaccga gaccagcgcc agctcatccg tgttgaacgc tggggagcgc ccggagggat
      781 tttagcggtg accgtaactc ttgctgaact ctgccgggag gcggtcaacc gctacgggga
      841 cgactggccc agaatcgagc gtcttatagc gctgcggggc gacgagctgc cggccgacga
      901 gcggctgcgc ctcgacgccg atgtcgcccg catcctcggc tttcgtgccc cggcggcaag
      961 ggccggcgcc ctcgccgagc ccgcgaaacc ggcacgcaac tgaacagcaa atccggcggc
     1021 gcatcggcaa tgacccggcg gacgatcgtc gtcgaagacg ccatgcagcg ggattaccgc
     1081 tacgagctga gcgcgccggt cggccgcgac ttcgatccgg cgttccggcc cgacctttcg
     1141 ccggcgcaga tgctgcggct cggcgtgttc ggtggcaaat acatgaccga ttgccgggac
     1201 gagtttccca aaagctggtt cgccggcgcc agattgtcgc cgggccggcg cgaccccgcg
     1261 ctcaacttct tcggcgtcga tgcgagccag cctttgtcgg tctggcgcgc caagggctgg
     1321 atccatccgg acgacccgcg cggctggttc cagtggtatt gccgctatta ccgggggcgg
     1381 cgcatggagg acgacgcacg gcagatcgga cgctggctca ggatgcgccg ccatgtccgg
     1441 cagatcgagc ggcactgcga gaaaggcgac ctcttctgcc ggcgtcggca gcgccaggcg
     1501 ctgctgcact gggcctacga cagccgcctc atctgagccg cgcgcgcgtc actgccaagg
     1561 tgttcgtcat gcgcacaaaa tcggtttgcg ggtcagaccg tgcgtagccg ccgcctcgcg
     1621 accctctgcg cgacaacttt ccacacaact tctctggcga gcgccggctc gcctgcaacg
     1681 gccccagcgc gcgggcgcgc gcgccatagg cccggcggaa tgcacttttt cgatacatag
     1741 gctcattcga caaatacacg gaatcttgcg cacgccgcca tgaaggcatg acacgaaatc
     1801 tttgcgggat cattggcgca attacgcgcc gagccggtca cgcggggatc agatttgctc
     1861 accttccgcg aaatctgagc tccgcgaggg tttcaccggg gtcggcgaaa tcgccagcgc
     1921 gtgcgaccct tggtcgagcc atgcaaaaac agccgcgcgc gcttgctttt tacgcaaagg
     1981 agtggatgat cctgccggcc cgcaccaagc gggtgcttgc ggctgtacgt ttgtgatcct
     2041 gaaccgcatc ctcctcagtc tggtcccagc actgttggcc ctcctgcttg ccgcaggtgt
     2101 ggtcgagctg gggacggcgt tcgattccga cgtgggcatc acggacggcg ggcccctgaa
     2161 aggacgcggc tcaccgaacc gattgattgc cgtacgcacc atcttcattc ctggcctgtt
     2221 cgaggatcaa gacaccgagg atcgtccgtc gctgaaagcg ccggccggaa gcgggtgggt
     2281 ggccgagcaa ggcgccggga gcgaggtcgc catgccgacc agccgcaccg gcccgtcctg
     2341 cgtctggcgg tgcgcaacac cgcccagggg accgcccctg gcctgacgca ccggcgcacg
     2401 cgcaggcggg cgctgcaatt ttctcaactt tggcgtggcc gcaccttgtt cggtgtggcc
     2461 gcgggggaac gtcttggaga tcgataaaga tggaaagcgt tgtgggtgaa ttggccttca
     2521 tggggggggc ggcttcgaag gccctgttca tattgctcga gccggagcgg ctcatgtttc
     2581 tcgggctcgg ctgcatcatg ggcctcgtgc tgggcatcgt gcccggcatc ggcgggcttg
     2641 ccggcacggc gatgctactg ccgttcacgt tcacgatgga tccgtattcg gcgttcgccc
     2701 tgctgctcgg gctcggcgcc accaccgcga cgggcgatcc gattccggcg gttttgttcg
     2761 gcgtacctgg aggtgccgcc tcggcggcaa ccgtgctcga cggtttcccg atggcgaagc
     2821 ggggcgaggc cggccgagcg ctcagcgccg cctacatgtc gtcgctgatg ggcggcatct
     2881 tcggcgccgc gctccttgcc atcaccattc cgatcctgcg gccggtgatg ctctatatag
     2941 gctcgccgga actactagcc ttttcggtac tcggcatctc gatggttgcc atcctgtccg
     3001 gcaacgcgcc gctgcgcggg ctgaccgccg gctgcttcgg cgtcatgctg gcgatgatcg
     3061 gctccgatcc gcagaccggc acgctgcgct ggactttcaa cagcctctac ctctgggaag
     3121 gcctgccgct cacgccgctc ttgctcggcc tgttcgccct gccggaactc tgtgacctgc
     3181 tcatctcccg caccgcgatc gcccaaggcg tcaccaacaa ggacatctac aagggccagt
     3241 ggcagggcgt gaaggattgc ttccagaact ggtggctgat cctgcgctgc tcgtggatcg
     3301 gcggcggcat cggctcgatc cccggcatca gcgcctcggt ggtcgactgg ctggcctacg
     3361 gccacgccct caagaccgag aagggggcga gccagacgtt cggcaagggc gacgtgcgtg
     3421 gcgtgatcgc gtccgaaagc tccaacaacg ccaaggaagg cggcgccctg gtgccgactg
     3481 tcgcgttcgg cgtgccgggc agcgccagca tggccatcct gctcggcgcg ttcctgatcc
     3541 acggcctcgt gccgggaccg gacatgctgc acaagaacct cgacgtcacc tactcgatgg
     3601 tgtggtcggt ggcgctcgcc aacatcgtcg gcgccggcgc ctgttatgcc ttcagcccgc
     3661 aattcgccaa gctggcgacg ctgcgctaca cgctgatcct gccggcggtg ctcggcatcg
     3721 tctatatcgg cgcgttcgag gcgtcgcggc agtggcagga catgttctcg ctgctcggct
     3781 tcggcgtgct cggctgggtg atgaagcagt tccgctggcc gcggccgccg ctggtgctcg
     3841 gcgtggtgct cggcgacagc atcgagcgct acctgttcat ctcggtcgag cgatacggca
     3901 tcgcctggtt cgcccgtccg gtcgtggcga tcctgttcgc gatcgccatc atcggtctca
     3961 tccggccgtt cctgcacgac gtgcgcatcc acggcggctt caagcgcatg gtgaccgagt
     4021 tccaggcgcc gaccttccgc tacggccagg ctttcacgct gttcatgctg gcggtgatcg
     4081 ccgggctgct ggcgctgtcg atggactgga atttcagcgc gcgcatcgtg ccgaccgtcg
     4141 tcggcatcac ggccctgacc gcgtgcgggc tcagcctgtt caacgacctg tgtcgcaaac
     4201 ccgaagccct caagaccgaa agccttgcgg agcaggcgat tcatcaggtc gaggggcaga
     4261 tgggtagcca ggaggccggc aagatccaca tggatctgac ctccgacacc gatcatctgc
     4321 cggtgcgcac gatcgtcacg cgggcgggga tcttcttcgc ctacctgctc ggcttcatgg
     4381 ccgtcatgtc ggtgatcggg ctgatcccga ccgccttcct gttcgtgatc gtcttcatgc
     4441 gcatggaagg gccggaacgc tggaagatcg tccttccgta tgccgtgatc ctcgtcaccg
     4501 gtatttacat tgccttcgac caggtcatgt cggtgccgtg gccgccgacc ctgctcggga
     4561 cgtggttccc ggccgcgaag gtcatcccgt ccgtctaggg cgaggcgctt cggcacgagc
     4621 ctgaacgaat tgcgttgggg gcgccttgtg cgcccccttc cattttgttc tccactgcca
     4681 tcccgccgcc aggttctggt gcgcaccggt cgcgagatcg gctgcagcca attcgcaatc
     4741 tcgcgcgttg tcccatccca acaggaggag agccatggcg accatgaaaa agctggcgcg
     4801 cttcgccgcc gaaccgagcg acggcggcgc gcggctgacc atcgaggccg aggacggcgc
     4861 gacgttcgag atcgaggcgg atttcgacca gctcgaagac ctcgcggaca cgttggacga
     4921 catcctgtcg gccaacgaag acgccctcga ggtcaaggac gaagccagca cgtgaacggc
     4981 tgacgggggc tgcgcgcaag gcctggagct cacggccacc gccgagatgt ctcatgcaaa
     5041 accgatggcg tgcggccccg agttgacgcc gacgtccc
//
LOCUS       DATAIQ010000872         1588 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_45406, whole genome shotgun sequence.
ACCESSION   DATAIQ010000872 DATAIQ010000000
VERSION     DATAIQ010000872.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1588)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1588)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1588
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_45406"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..509
                     /locus_tag="VHN20_14345"
     CDS             <1..509
                     /locus_tag="VHN20_14345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002713330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX2726995.1"
                     /translation="LLGPLVGIDNGLNAVWRALTGERLGLVLMGSAAAIVVAYTVRFL
                     SIATGSLAAGFERVSGGIDDAARTLGASARELVLRIQLPLLRPALASAALLVFVDCLK
                     ELPATLLLRPLNTETLATLVYGHASRGAFEDGALAALVIVAVGVWPVLQLTRSAELAH
                     LSRRQRSG"
     gene            complement(506..1165)
                     /locus_tag="VHN20_14350"
     CDS             complement(506..1165)
                     /locus_tag="VHN20_14350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012384140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacid CoA-transferase subunit B"
                     /protein_id="HEX2726996.1"
                     /translation="MAWTRDQMAARAAKELRDGFYVNLGIGIPTLVSNYIPHGMNVQL
                     QSENGMLGMGPFPFEGEEDADLINAGKQTITELPTTSYFSSADSFAMIRGGHIDLSIL
                     GAMQVAENGDLANWMIPGKMVKGMGGAMDLVAGVKKVVVVMEHTAKDEPKLLKRCNLP
                     LTGAGVVDMVITDLGVFTIDKKGGGGMALVELAPGVTADEIRAKTEANYRVALQREAA
                     A"
     gene            complement(1165..>1588)
                     /locus_tag="VHN20_14355"
     CDS             complement(1165..>1588)
                     /locus_tag="VHN20_14355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012046653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="3-oxoacid CoA-transferase subunit A"
                     /protein_id="HEX2726997.1"
                     /translation="ERIRAGGAGIPAFVTKTGAGTIIAEGKETRSFDGEDYIMERGLF
                     ADLAIVHAWKGDTEGNLVYRKTARNFNPMMATAAKVTIAEVENLVQPGEIDPDHIITP
                     GIFVQRMVHVPAARKHIEQRTTRKRAAAAAPAGAGEEV"
BASE COUNT          210 a          539 c          546 g          293 t
ORIGIN      
        1 gcctgctcgg accgctcgtg gggatcgaca acgggctgaa cgcggtctgg cgggcgttga
       61 cgggcgagag gctcggcctc gtcctcatgg ggtcggccgc ggcgatcgtg gtcgcctaca
      121 cggtccgctt cctgtcgatc gcgacgggct cgctcgcggc cgggttcgag cgcgtctcgg
      181 gcggcatcga cgacgcggcg cgcacgctcg gcgcgagcgc gcgtgagctg gtgctgcgca
      241 tccagctgcc gctgctgcgc ccggctctgg cgagcgcagc gctgctcgtc ttcgtcgatt
      301 gcctcaagga gctgccggcg acgctgctcc tgcgcccgct caacaccgag acgctggcaa
      361 cgctggtcta cggccatgcc tcgcgcggcg ccttcgagga cggcgcgctg gcggcgctgg
      421 tgatcgtcgc cgtcggggtg tggccagtgc tgcagctgac gcgcagcgcc gagctggccc
      481 acctgtcccg gaggcagagg tcgggctagg ccgcggcctc gcgctggagc gcgacgcggt
      541 aattcgcctc ggtcttggcg cggatctcgt cggcggtgac gccgggcgcc agctcaacga
      601 gggccatgcc gccgccgccc ttcttgtcga tggtgaagac gccgagatcg gtgatcacca
      661 tgtcgacgac gccggcgccc gtcagcggca ggttgcagcg cttgagcagc ttcggctcgt
      721 ccttggcggt gtgctccatc acgacaacca ccttcttgac gccggcgacg aggtccatgg
      781 cgccgcccat gcctttcacc atcttgcccg ggatcatcca gttggcgagg tcgccgttct
      841 cggcgacctg catggcgccg aggatggaca ggtcgatatg cccgccgcgg atcatggcaa
      901 agctgtccgc gctcgagaaa tagctcgtgg tcggcagctc ggtgatggtc tgcttgccgg
      961 cgttgatcag gtccgcgtct tcctcgccct cgaacgggaa gggccccatg ccgagcatgc
     1021 cgttctcgct ttgcagctga acgttcatgc cgtgcgggat gtagttcgag acgagcgtcg
     1081 ggatgccgat gccgagattg acgtaaaaac cgtcgcgcag ctccttcgcc gcacgggcgg
     1141 ccatctggtc gcgtgtccag gccatcagac ttcctcccct gctcccgccg gcgccgcggc
     1201 ggcagcgcgc ttgcgcgtcg tgcgctgctc gatgtgcttc cgcgcggccg gcacatgaac
     1261 catgcgctgg acgaaaattc ccggcgtgat gatgtgatcg ggatcgatct cgcccggctg
     1321 caccagattc tccacctcgg cgatggtcac cttggcggcc gtcgccatca tcggattaaa
     1381 attgcgcgcc gtcttgcggt agacgaggtt gccctcggta tcgcccttcc aggcatggac
     1441 gatggcgagg tcggcgaaca ggccacgctc catgatgtag tcctcgccgt cgaagctgcg
     1501 cgtttccttg ccctcggcga tgatcgtccc ggcgccggtc ttggtgacga aggccggaat
     1561 gccggcgccc cctgccctga tgcgctca
//
LOCUS       DATAIQ010000873         1523 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_45443, whole genome shotgun sequence.
ACCESSION   DATAIQ010000873 DATAIQ010000000
VERSION     DATAIQ010000873.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1523)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1523)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1523
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_45443"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..61)
                     /gene="rpsL"
                     /locus_tag="VHN20_14360"
     CDS             complement(<1..61)
                     /gene="rpsL"
                     /locus_tag="VHN20_14360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007682177.1"
                     /note="interacts with and stabilizes bases of the 16S rRNA
                     that are involved in tRNA selection in the A site and with
                     the mRNA backbone; located at the interface of the 30S and
                     50S subunits, it traverses the body of the 30S subunit
                     contacting proteins on the other side; mutations in the
                     S12 gene confer streptomycin resistance; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HEX2726998.1"
                     /translation="MPTINQLIRKGREPQKAKSK"
     gene            389..628
                     /locus_tag="VHN20_14365"
     CDS             389..628
                     /locus_tag="VHN20_14365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2726999.1"
                     /translation="MGKVHFWLMGFGIGFILVNWFFDFPFGFAGMGIAVGALLLGIRQ
                     WFMASAHEERARGAFSNAYVGADRKNLTYHGPDWD"
     gene            complement(633..>1523)
                     /locus_tag="VHN20_14370"
     CDS             complement(633..>1523)
                     /locus_tag="VHN20_14370"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX2727000.1"
                     /translation="EGGVTLALRDAIARGWVQGPRIVDAAESISTTGGHMDGRGALND
                     ELVANLPSPQNLCDGPEDCRKAVRRQVDRGADVIKFATTGGVNSGTGLATRMTEAEAR
                     ALVETAHAYGRKVAVHAHGADGIKLALRAGADSIEHGTVMDEEIVRAMRTRGTYYVPT
                     LSTVNGYLERIAADPNAYAPAVRKQIDWRIAITGQSLAKAWPAGVRIAFGTDAGVSKH
                     GRNADEFELMVKFGMPPAETIKAATVNAADLLGIAQETGTIEPGKSADIIAVAGDPQQ
                     DVTILKRVDFVMARGEVIKR"
BASE COUNT          215 a          499 c          508 g          301 t
ORIGIN      
        1 ccttcgactt ggccttctgc ggttcgcgac ccttgcggat cagctggttg atcgtcggca
       61 tgaagccttc acctttcctc gggtcccacg aaagcagtac tttcgggggg tcccatcgtt
      121 gcggggaagt ccccgcggtt actttgtccc tttcagcacg aaatgccgga tgccttgcgg
      181 ctccggcgtc ccacgcgtgc caggacaatg ttcagctctg cccggaagcg gcgatacgaa
      241 atcgccctcg cccggacgag cggcccctta agcagctttg gcagcgaggt caacgggggc
      301 agaggcgcac cggaacccga ctcgttcacg atttctttgc cgatgatgga ctaacgcgcg
      361 gtagttgggt gtgaagaagg ggcgtagcgt gggcaaggtt catttctggc tgatggggtt
      421 cggcatcggc ttcatcctcg tcaactggtt ctttgacttc ccgttcggct ttgccggcat
      481 gggcatcgca gtaggtgcgc tgctgctcgg cattcgtcag tggttcatgg cgagcgctca
      541 cgaggaacgg gcgcgcggcg ccttctccaa cgcctatgtc ggcgcggacc gcaagaacct
      601 gacttatcac ggccccgact gggactgagc gcctagcgct tgatcacttc gccgcgagcc
      661 atgacgaagt cgacccgctt gaggatggtc acatcctgtt gcgggtcacc ggcgacggcg
      721 atgatgtcgg cgctcttgcc cggttcgatc gtgccggttt cctgcgcgat tccgagcaag
      781 tcggcggcat tgacggtggc cgccttgatc gtctcggccg gcggcatgcc gaatttgacc
      841 atcagctcga actcgtcggc gttgcggccg tgcttgctga ccccggcgtc tgtcccgaag
      901 gcgatcctga ccccggccgg ccaggccttg gctagcgact ggccggtgat cgcgatgcgc
      961 cagtcgatct gctttcggac ggcgggcgca taagcgttgg ggtcggccgc gatccgctcg
     1021 aggtagccgt tcaccgtcga tagcgtcggg acgtaatagg tgcccctggt gcgcatcgcg
     1081 cggacgatct cctcgtccat caccgtgcca tgctcgatcg aatcggcgcc ggcgcgaagc
     1141 gccagcttga ttccgtcggc gccgtgggcg tggaccgcga ccttgcggcc ataggcatgg
     1201 gcggtctcga ccaaggcgcg cgcctcggcc tccgtcatcc gcgtggcgag gccggtgccg
     1261 ctgttgaccc cgccggtggt ggcgaacttg atgacgtcgg cgccgcggtc gacctggcgg
     1321 cggacggcct tgcggcaatc ctccggcccg tcgcacaaat tctgcgggct cggcaggttg
     1381 gcgaccagct cgtcattcag cgcgccgcgg ccgtccatat ggccgccggt ggtcgagatg
     1441 ctctcggccg catcgacgat ccgcgggccc tggacccagc cgcgggcaat cgcgtcgcgc
     1501 agcgccaggg tcaccccgcc ctc
//
LOCUS       DATAIQ010000874         1504 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_322486, whole genome shotgun sequence.
ACCESSION   DATAIQ010000874 DATAIQ010000000
VERSION     DATAIQ010000874.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1504)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1504)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1504
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_322486"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            370..1404
                     /gene="hemE"
                     /locus_tag="VHN20_14375"
     CDS             370..1404
                     /gene="hemE"
                     /locus_tag="VHN20_14375"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004853 - uroporphyrinogen decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HEX2727001.1"
                     /translation="MRRTTKPILRVLDGEAVWPPPIWMMRQAGRYLPEYREVRARAGS
                     FLDLCYTPQLAAEVTLQPIRRFGFDAAIMFSDILVIPHALGQDVRFVENEGPRLEPVA
                     EARDLGRLAEALPLDRLAPVFETLERVKRALPGDTTLLGFCGAPWTVASYMIAGKGTP
                     DQAPARLTAYRDADFMRSLIDRLVAASTAYLIAQIDAGAEAVQIFESFGAALPPALLG
                     PLSLEPIGRIVRGLKAARPQAKAIVFVRGGGASLARIAGAVPADALALDWSVDVANAV
                     RSLPPELATQGNLDPLALVGGGQPLKDGVAAILAAARGRPHIFNLGHGILPETPVGHV
                     EQMIAQVRAA"
BASE COUNT          225 a          506 c          503 g          270 t
ORIGIN      
        1 acggggagtc gacggctgtg gatagatcac ggctccggcg gggtccagcc gcacccccct
       61 ctggatatct cggttcccgg tcaacaggcc gagcttccgg aataagtttg gcggcgacgt
      121 gggagaatcc gggacggcgg actccccgcc tccctcgcgc gggccgcgca atatctctta
      181 acgctttgtt aatgtttacg attcgtaaac caatcagcga cccggcctgc ccgcgacaag
      241 gccgctaatg gaggcctgcc ccatgtgcac gggatgtgga cggggttgcg cctccaggag
      301 tcacggccca agagaaacaa caaagattca agattcaatt ttcttttctt ttagagagcc
      361 ggtcaccgcg tgaggcgaac aaccaaaccg atcctacggg ttctcgacgg cgaggccgtc
      421 tggccaccgc cgatctggat gatgcgccag gccggccgct acctgcccga gtatcgcgag
      481 gtccgggccc gggccggttc cttcctcgat ctctgctaca cgccgcagct cgccgccgag
      541 gtcacgctgc agccgatccg acgctttggc ttcgacgcgg cgatcatgtt ctcggacatt
      601 ctcgtcatcc cgcatgcgct cggtcaggat gtgcgcttcg tcgagaatga ggggccgcgg
      661 ctcgagcccg tcgcagaggc gcgcgatctc ggcaggctcg cggaggcgtt gccgctcgat
      721 cggcttgcgc ccgtgttcga gaccctcgag cgggtcaagc gcgccctccc cggcgacacc
      781 acgctcctcg gcttctgcgg cgcgccctgg acggtggcga gctatatgat cgccggcaag
      841 gggacgcccg atcaggcgcc ggcgcgtctg acggcatatc gtgacgcaga tttcatgcgc
      901 tccctgatcg acaggctggt cgccgcgtcc acggcctatc tgatcgccca gatcgatgcc
      961 ggcgccgagg ccgtgcaaat tttcgagagc ttcggtgcgg cgctgccccc tgccctgctt
     1021 gggccgctct ccctcgagcc gatcggccgc atcgttcggg ggctgaaggc ggcgcggccg
     1081 caggccaagg cgatcgtgtt cgtccgtggc ggcggagcga gcctggcgcg gatcgcgggg
     1141 gctgtaccgg ccgacgcgct ggccctcgat tggagcgtcg acgtcgcaaa tgcggtgcgg
     1201 tcgttgccgc cggaattggc gacgcagggc aatctggacc cgctggcgct ggtcggcggc
     1261 ggccagccgc tcaaggacgg cgtcgccgcg atcctcgccg cggcccgcgg ccggccgcat
     1321 attttcaacc tggggcatgg catcctgccg gagacaccgg taggtcatgt ggagcagatg
     1381 atcgcccagg tccgtgcggc ctgaagcggc ttccgctcag tcgcgatccg ctgccccttc
     1441 gtttacccaa ccggtgtttg gcggcttcca ggctcacccg ggcggcgaac cgtggtgagg
     1501 ctct
//
LOCUS       DATAIQ010000875         2918 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_322526, whole genome shotgun sequence.
ACCESSION   DATAIQ010000875 DATAIQ010000000
VERSION     DATAIQ010000875.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2918)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2918)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2918
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_322526"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..767)
                     /locus_tag="VHN20_14380"
     CDS             complement(<1..767)
                     /locus_tag="VHN20_14380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006088071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX2727002.1"
                     /translation="MDEKGIGAQLEGKVAVVTGGTQGLGEAIARLFAARGAKGIVICG
                     RNAERGAAVAADMARQGCRVAYVRADLALIDDTRAVVAEADRVFGRVDVLVNAAGITD
                     RGTIFDTSPELFDRMFAVNTRAPFFLMQDAAKIMRREGIEGAIVNILSMSAHGGQPFI
                     TAYSGSKGALATLTKNAAFSLMPWRIRVNALNIGWMNTPGEDRIVRLYHGAQDGWLEK
                     AAAEQPFGRLIDPHEVARACAFLVSAESGLMTGSIID"
     gene            871..1890
                     /gene="iolG"
                     /locus_tag="VHN20_14385"
     CDS             871..1890
                     /gene="iolG"
                     /locus_tag="VHN20_14385"
                     /EC_number="1.1.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018183594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050112 - inositol 2-dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0019310 - inositol catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inositol 2-dehydrogenase"
                     /protein_id="HEX2727003.1"
                     /translation="MAGSKLRMGLLGAGRIGRIHGGNIAAHPDAQLVAVADASFEAAS
                     SLAQATGAAVQDIDAVLGSDEVDAVVICTPTDMHADLIERAARAGKAIFCEKPISLNS
                     ERTRACLEVAQETGAKLMIGFNRRFDPSFAALRERIRDGEIGKVELVTILSRDPSPPP
                     TDYLSRSGGLFRDMMIHDFDMARFLLGEEVVEVHAVASCLVDPAIRAAGDVDTAAVMM
                     KTASGKIAQISNSRRATYGYDQRIEVHGSLGLLSAGNRRTTTVELANAGGYSRDPALP
                     FFLERYAEAYRAELDAFVTGVLGGRALSPTGEDGLKAQRLADAATAAARTGKAMRLTP
                     GTGAP"
     gene            1887..2678
                     /locus_tag="VHN20_14390"
     CDS             1887..2678
                     /locus_tag="VHN20_14390"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008934 - inositol monophosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006020 - inositol metabolic process
                     [Evidence IEA];
                     GO_process: GO:0046855 - obsolete inositol phosphate
                     dephosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HEX2727004.1"
                     /translation="MTPANEALDLRLFAAAAIAREAGGLARRHFRNRPKTLHINFKGD
                     QDYVSATDAEVEALIRTRLHETFPGDGFYGEEGGGTFGDSVWVVDPIDGTANFMRRIP
                     QFCISIAFVRDGRCEVGVIYDPIQDELFAARRGGGARLDGHPMHVSGLADIRQATVEA
                     GWSTRLPSDAYTALVQTLKNEGAGVRRGGSGALALAYVADGRVDAYCELHMNSWDALA
                     GLLLVQEAGGWTNDFLANEGLTQGNPILGCTPALTDILRRAMGLK"
BASE COUNT          473 a         1036 c          963 g          446 t
ORIGIN      
        1 aagtcgatga tggagccggt catcagtccg gactcggcgc tcaccaggaa ggcgcaagcg
       61 cgtgccacct cgtgcggatc gatgagacgg ccgaagggct gctcggccgc ggccttttcg
      121 agccagccgt cctgcgcgcc gtgatacagg cgcacgatgc ggtcctctcc cggcgtattc
      181 atccagccga tattgagcgc attcacgcgg atgcgccacg gcatcaggct gaaggccgcg
      241 ttcttcgtca gcgtcgcgag cgcgcctttc gagcccgagt aagccgtgat gaacggctga
      301 ccaccatgcg ccgacatcga caggatgttg acgatggcgc cttcgatgcc ctcccgccgc
      361 atgatcttcg cggcatcctg catcaggaag aagggcgccc gcgtgttgac cgcgaacatg
      421 cggtcgaaca gctccggcga ggtgtcgaaa atggtgccac ggtcggtaat cccggcggcg
      481 ttgacgagca cgtcgacgcg accgaacacg cgatcggcct ctgccaccac agcgcgcgtg
      541 tcgtcgatca gcgccagatc cgcgcgcaca tatgcgacgc ggcaaccctg ccgggccata
      601 tcggcagcga cggcggctcc gcgctcggcg ttacggccgc agatcacgat gcccttggcg
      661 ccacgcgcgg cgaacagccg ggcgatcgcc tcaccgagcc cctgcgtgcc gccggtcacg
      721 accgcgacct tgccctcgag ctgcgctcca atcccctttt cgtccatgcg ccccctgtcc
      781 ccagcttgtt gcggcggcca tcctgcgccg gttgcggcca gatttccatc ggttactgtc
      841 tcggcaattg gtcgatgaga gcgggtggga atggccggaa gcaaactacg gatgggactg
      901 ctcggggcgg gtcgcatcgg acgtatccac ggcggcaaca tcgccgcgca cccggatgcg
      961 caactcgtcg cggtggccga tgccagcttc gaggcggcga gcagccttgc ccaggcaacg
     1021 ggggcggccg tgcaggatat cgacgccgtc ctaggctcgg acgaggtcga tgccgtcgtc
     1081 atctgcacgc ccacggacat gcatgccgac ctgatcgagc gcgccgcgcg cgccggcaag
     1141 gcgatcttct gcgagaagcc gatcagcctc aattcagagc gcacgcgcgc ctgcctcgag
     1201 gtcgcgcaag aaaccggcgc caagctgatg atcgggttca accgtcgctt cgacccgagc
     1261 ttcgcggccc tgcgcgagcg tatccgtgac ggcgaaatcg gcaaggtcga gttggtcacg
     1321 atcctgtccc gcgacccgtc cccgccgccg acggactacc tttcccgctc gggcggcctg
     1381 tttcgggaca tgatgatcca cgacttcgac atggcccgct tccttctcgg cgaggaggtg
     1441 gtcgaagtgc acgccgtcgc ctcctgcctc gtcgatcccg ccattcgcgc ggccggcgac
     1501 gtcgacaccg ccgcggtgat gatgaagacc gcgtccggca agatcgccca gatctcgaac
     1561 tcgcgtcggg cgacatacgg ctacgaccag cgcatcgagg tgcatggcag cctcggcctc
     1621 ctgagcgccg gcaaccgccg caccacaacg gtcgaactgg ccaatgccgg gggctattcg
     1681 cgcgatcccg ccctgccctt ctttctcgag cgctacgccg aggcgtatcg cgccgagctc
     1741 gatgcattcg tgacaggcgt gctcggcggg cgcgcgctgt cgccgacagg cgaggacggc
     1801 ctcaaggcgc aacggctcgc cgacgcggcc acggcggcgg cgcggaccgg caaggccatg
     1861 cggctcacgc ccgggacggg tgcgccatga cgccggccaa cgaagccctc gatctgcgcc
     1921 tgttcgccgc cgccgccatc gcccgcgagg caggcggcct ggcccggcgg cacttccgca
     1981 accgcccgaa gacgctgcac atcaacttca agggcgacca ggactacgtc tccgcgacgg
     2041 acgcggaggt cgaagcgctc atccgcaccc ggctgcacga aaccttcccg ggcgacggtt
     2101 tttacggcga ggagggcggc ggcacgttcg gcgacagcgt gtgggtggtc gacccgatcg
     2161 acggcaccgc caacttcatg cgccgcatcc cgcagttctg catctcgatt gccttcgtgc
     2221 gcgacgggcg ctgcgaggtc ggcgtaatct acgaccccat ccaggacgaa ctgttcgccg
     2281 cccggcgcgg cgggggggcc cggcttgacg gccatcccat gcatgtcagc gggctggccg
     2341 acatccgcca ggcgacggtc gaggccggct ggtcgacgcg cctgccgtcc gatgcctaca
     2401 ccgccctcgt ccagacgctc aagaacgaag gcgcgggcgt gcggcggggc gggtccggcg
     2461 cgctcgccct cgcctacgtg gcagacgggc gcgtcgacgc ctattgcgag ctgcacatga
     2521 actcgtggga cgccctcgcc ggcctgctcc tggtccagga ggcaggcggc tggaccaatg
     2581 atttcctcgc caacgagggc ctcacgcagg gcaaccccat cctcggttgc acgcccgccc
     2641 tcactgacat cctgcggcgc gccatgggcc taaaatgacc cccgctcccc cggcacgcgc
     2701 aaagcacgtt gacgggccgc ctgatcggga atgagatgcg ggcacaacaa agaccattgg
     2761 gaggagatcc ggatgaccct tcagatcaag aggcggctgc tcggccgtct cgtggcttgc
     2821 gcgttcttcg gcgtcggcgc cgcgctggcg gcggcaccgg ccaaggcaca gggccagctg
     2881 gtcctctatt gcgcggtcaa cgaggaatgg tgccgcgc
//
LOCUS       DATAIQ010000876         1810 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_415092, whole genome shotgun sequence.
ACCESSION   DATAIQ010000876 DATAIQ010000000
VERSION     DATAIQ010000876.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1810)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1810)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1810
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_415092"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..446)
                     /locus_tag="VHN20_14395"
     CDS             complement(<1..446)
                     /locus_tag="VHN20_14395"
                     /inference="COORDINATES: protein motif:HMM:NF014653.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ldh family oxidoreductase"
                     /protein_id="HEX2727005.1"
                     /translation="MPVTPEAQVLVSEAELKSFCASVLSCVDVPEADAREIIDNLVEA
                     DLRGVESHGVVRLPIYVERLAAKATNPRPQVKVIRETPTSLVIDGDNGMGQLVGKRAM
                     ERAIEKAKQGLCVFASVRNSNHYGAAAYYAQMACPHDMIGLSFTIGG"
     gene            complement(474..1307)
                     /locus_tag="VHN20_14400"
     CDS             complement(474..1307)
                     /locus_tag="VHN20_14400"
                     /EC_number="3.1.1.99"
                     /inference="COORDINATES: protein motif:HMM:NF020039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HEX2727006.1"
                     /translation="MLGESPIWSSAESVLYWVDIHKPSILRADLAEGSVTEWPLPENV
                     GSIGFRPDGLVASLRLGFALFDTATGAVKRLAQPLAGRHNIRFNDGRVDRAGRFWAGT
                     VHEKRERGTAALYRLDPDGSCREMATGFTVSNGISWSPDNRTMYFADSQDRAVYAFDF
                     DLADGAIANRRLFARFSEGEGIPDGATVDVDGAYWVAHFDGGKITRYAPDGRVDRTIP
                     MPVPRPTSCAFGGPGLKTLYVTSASFGLSPEQRASAPLSGSVFALDVGTQGLPEPVFR
                     G"
     gene            complement(1372..>1810)
                     /locus_tag="VHN20_14405"
     CDS             complement(1372..>1810)
                     /locus_tag="VHN20_14405"
                     /inference="COORDINATES: protein motif:HMM:NF016200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015740 - C4-dicarboxylate transport
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HEX2727007.1"
                     /translation="MLVLLALGIFVRLVPVFSMSGYDEVIELLVAWTVFVGAVALWRE
                     GSLFKVELIDLLGSARLARAADLVARLLMLAFAVVFLVEGWEFTVGSIETMPFLFVSK
                     QPWYAAMPVAGALMTAYGIAGVVQWWFGRRPLPAEPPATQISV"
BASE COUNT          347 a          589 c          588 g          286 t
ORIGIN      
        1 ccgccgatcg tgaaactgag tccgatcata tcgtgcggac acgccatctg ggcgtaatag
       61 gcggcagcac cgtagtggtt gctgttgcgg accgacgcga acacgcacag cccctgcttc
      121 gccttttcga tcgcgcgctc catggcgcgt ttgccgacga gctggcccat gccgttgtcg
      181 ccgtcaatca cgagcgaggt cggagtctcg cgtatcacct tcacctgcgg tcgcgggtta
      241 gtggccttgg ccgcgagccg ctccacatag atcggcagcc gcacgacgcc gtgcgactcg
      301 accccccgca ggtcggcttc gacgaggttg tcgataatct cgcgggcgtc ggcttccggc
      361 acgtcgacac agcttagcac gctggcgcag aacgatttca attccgcttc ggagacgaga
      421 acctgggctt cgggcgtgac gggcaacggt ggatctcctg atggcgcgcg ggttcagccg
      481 cggaacacgg gctccggcag cccttgcgtg ccgacgtcca gcgcaaacac gctgccgctc
      541 agcggcgcgg aggcgcgctg ctcgggcgag agtccgaatg atgcggaggt gacgtagaga
      601 gtcttcaaac ccggtcctcc gaaggcgcag ctcgtcggcc gcggcaccgg catcgggatg
      661 gtccgatcaa cccggccgtc cggggcgtag cgggtgatct taccgccgtc gaaatgagcc
      721 acccagtagg cgccgtcgac gtcgacggtc gcgccatccg ggattccctc gccttcactg
      781 aagcgggcga aaagccgccg gttggcaatg gctccgtccg ccagatcgaa atcgaacgcg
      841 tagacagctc ggtcttgcga gtcggcaaaa tacatcgtgc ggttgtcggg gctccacgag
      901 atgccgttgg agaccgtgaa gcccgtggcc atctcgcgac aactgccatc cgggtcgaga
      961 cggtacaagg cggccgtgcc gcgctcacgc ttctcgtgga ccgttccggc ccagaaccgg
     1021 ccggcgcggt cgacgcgccc atcgttgaag cgaatgttgt gacgcccggc caatggctgg
     1081 gcgaggcgct tgaccgcgcc ggtggcggtg tcgaacagcg cgaatccgag tcgtagggac
     1141 gcgaccagcc cgtcgggtcg gaagccgatc gagccgacgt tctcgggcag cggccactcc
     1201 gtaacggagc cctcagcgag atctgcgcgc aaaatagaag gcttgtgaat gtccacccag
     1261 tagagaaccg attccgcgct actccagatc ggcgattccc cgagcaagga atccctcttc
     1321 aggacgcagt gtatggttgg cgtggggctc attcggctct cgtggacctc gtcagacgga
     1381 aatttgggtc gccgggggct ctgccggcaa gggacgacgc ccgaaccacc attgaacaac
     1441 gccggcgatg ccgtaagccg tcatcaatgc gccggcgacc ggcatcgccg cgtaccaggg
     1501 ctgcttggaa acgaacagga acggcatggt ctcgatcgac cctacggtga actcccagcc
     1561 ctcaacgagg aacaccactg cgaaggcaag catcagcagg cgcgcgacga ggtccgcggc
     1621 gcgcgccagc cgcgccgacc cgagcagatc tatgagttcg actttgaaca gggagccttc
     1681 gcgccacagg gcgacagcgc ctacgaaaac cgtccaggca accaggagct cgatcacctc
     1741 gtcatagccg ctcatcgaaa acacggggac gagccgaacg aaaatcccga gcgccagcag
     1801 gacgagcatg
//
LOCUS       DATAIQ010000877         5101 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_45490, whole genome shotgun sequence.
ACCESSION   DATAIQ010000877 DATAIQ010000000
VERSION     DATAIQ010000877.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 5101)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5101)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5101
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_45490"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            23..241
                     /locus_tag="VHN20_14410"
     CDS             23..241
                     /locus_tag="VHN20_14410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020177025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2093 domain-containing protein"
                     /protein_id="HEX2727008.1"
                     /translation="MNRFEGGGEAVIQYLDSNIRVVRPGSYVRCAVTGQPIPLDQLKY
                     WSVERQEAYASPDAVLDRLGLKPRDKST"
     gene            complement(261..1274)
                     /gene="lpxK"
                     /locus_tag="VHN20_14415"
     CDS             complement(261..1274)
                     /gene="lpxK"
                     /locus_tag="VHN20_14415"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017486223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009029 - tetraacyldisaccharide 4'-kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HEX2727009.1"
                     /translation="MRAPAFWWRPHSTPASILLRAPAALYGAIAARRMRARGQRAPLP
                     VACIGNFTVGGSGKTPAALAVAAMLAGEGHHPVFLTRGYGGRLAGPVRVDAARHAARD
                     VGDEPLLLARAFPVVVSRDRPAGAQLCAAEGASVIVMDDGLQNPSLVKNLALAVVDGA
                     SGVGNGLCLPAGPLRAPLAAQWPHVHAVVVVGDGAPGEAVAGEARRRGAPVLRARLEA
                     EATAAARLRGQRVLAFAGIGRPEKFYATLAACGADVVRTRSFPDHHPFAAAEIGALVA
                     AAAAENLAPVTTEKDLVRIAGLSHAASDAERIQALPVRLAFEDARALRELMAARLSAV
                     GAA"
     gene            complement(1274..2566)
                     /locus_tag="VHN20_14420"
     CDS             complement(1274..2566)
                     /locus_tag="VHN20_14420"
                     /EC_number="2.4.99.12"
                     /EC_number="2.4.99.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011440751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-D-manno-octulosonic acid transferase"
                     /protein_id="HEX2727010.1"
                     /translation="MSAHSPFLLKLYRGGLVALEPAAAGLLLWRQRKGKEDRERLQER
                     RGWATHGRPAGQLAWLHGASIGETLSLMPVVEQLMLRGIEVLVTSGTRTSAEVLARRL
                     PPGAMHQFVPLDVPRYVQRFLDHWQPDLVLFAESEVWPNIIMELERRRIPLVLVNGRL
                     SERSYQRWSRLPHVARALFQRFALCIAQSADDAERLARLGASRVSVAGNLKFDSPPPP
                     ADPRVLARLSGLVAGRPLWLAASTHPGEEEMIVDVHRGLMDRFPDLLTIIAPRHPHRG
                     TEAAEIASGAQLTVARRAGQENPSRDIDVYLADTVGELGLFYRLAPLVFMGGSLVPHG
                     GQNPIEPVKLGSAILHGPHVHNFTDVYRALDRAGGALPIPNAPTLVRALTELLADPRL
                     AREMSRAAGETVDNLGGGVARTMQSIEPFILQMKLEAR"
     gene            complement(2563..3309)
                     /locus_tag="VHN20_14425"
     CDS             complement(2563..3309)
                     /locus_tag="VHN20_14425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012455022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HEX2727011.1"
                     /translation="MSLAKRISRSRPVQELLGFLFARYLGLVQRTNRFVTEPADAYAR
                     IGPHMPVIAAMWHGQHFMIHFAKRPQDPAASLVSRSADGEFNAIALRHLGVRAIRGSG
                     ARGRDPRLKGGAEALRAMLRALDAGEMVVMTADVPKIARVCGEGIITLARLSGRPIVP
                     VAVVASRRIDFASWDRASLGLPFGRGAMVLGEPIFIDRHADEAALVGARRAVEDGLDQ
                     VHERAYALLGARDPGAATRPRQRLSQGSPA"
     gene            complement(3324..3557)
                     /locus_tag="VHN20_14430"
     CDS             complement(3324..3557)
                     /locus_tag="VHN20_14430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020177019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4170 domain-containing protein"
                     /protein_id="HEX2727012.1"
                     /translation="MTDSSPKQLLHLVFGGELAHLDSTDFKDLSQLDIVGVFPNYTSA
                     HAAWKGKAQATVDNAQMRYFIVHLHRLLDPADA"
     gene            complement(3570..4421)
                     /locus_tag="VHN20_14435"
     CDS             complement(3570..4421)
                     /locus_tag="VHN20_14435"
                     /EC_number="3.1.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008441 - 3'(2'),5'-bisphosphate
                     nucleotidase activity [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3'(2'),5'-bisphosphate nucleotidase CysQ"
                     /protein_id="HEX2727013.1"
                     /translation="MDSSADLPAHLARRLNPVVRHAAREAGTIAMRFFRSGLKTSARI
                     WSKAGGSPVTEADVAVDTFLKVKLSEALPQASWLSEETADDPSRIGRQLVWIVDPIDG
                     TRAFLSGSHDWSVSIALLAEGRPVLGVVYAPAHNTLYEARRGEGALRDGEPIEASPAE
                     RLPDVSIAGPNGMLDELEQRIGPFKRPPRIPSLALRLARVAEGAVDAGLVSANARDWD
                     IAAADLILAESGGVLSGLDEVPPAYNQTDPVHGELVAAPRRLHPRLIAAMQGRAQAPG
                     ESMSLRG"
     gene            4817..>5101
                     /locus_tag="VHN20_14440"
     CDS             4817..>5101
                     /locus_tag="VHN20_14440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727014.1"
                     /translation="MDTTPTAGAGSPRGSGPGVPPSVAAHLALGKRITGAASRLIGRH
                     DARPAGVALRLDPGAEASDAFDIALVDANARPLMVLGPFPEEDVVAVWRSL"
BASE COUNT          788 a         1778 c         1832 g          703 t
ORIGIN      
        1 cgatggccgt gaaaggatgc ggatgaacag gttcgagggt ggcggcgaag ctgtgatcca
       61 gtatctcgac tcgaacatac gagtcgtgag acctggctcg tatgtgcgct gcgccgtgac
      121 cgggcaaccg atcccgctcg atcagctgaa atactggagc gtcgaacggc aggaggcgta
      181 tgcctcgccg gacgccgtcc ttgatcggct cgggctcaag ccgcgcgaca agagcacctg
      241 atcgcgccgc gcgcgacgcc tcaggcggcg cccaccgccg acaagcgtgc ggccatgagc
      301 tcgcgcaacg cgcgcgcgtc ctcgaatgcg aggcgcacgg gaagcgcctg aatcctctcg
      361 gcgtcggatg cggcgtggct gagccccgca atccggacga ggtccttctc ggtcgtcacc
      421 ggcgcgagat tctctgccgc cgcggccgcg acgagggcgc cgatctcggc ggcggcgaac
      481 ggatgatgat cggggaatga tcgcgtccgc accacgtccg caccacacgc ggcgagcgtg
      541 gcgtagaatt tttccggccg cccgatgccg gcgaaggcga ggacgcgctg gccccgcagg
      601 cgcgccgcgg cggtcgcctc ggcttcgagc cgcgcccgca gcaccggcgc gccgcgccgc
      661 cgcgcctcgc cggccaccgc ctctcccggc gcgccgtcgc cgaccacgac cacggcatgg
      721 acatgcggcc attgcgcggc gagcggcgcg cgcagcggcc ccgccggcag gcacaagccg
      781 ttgccgacgc cgctggcgcc gtcgaccacg gccaaagcga ggttcttgac gagcgagggg
      841 ttctgcaggc cgtcgtccat gacgatgacg ctcgcgccct cggcggcgca gagctgcgcg
      901 cccgccgggc gatcgcgcga caccaccacc gggaacgcgc gcgccagaag cagcggctca
      961 tcgccgacgt cgcgtgccgc gtgccgcgcc gcgtcgacgc ggaccggacc ggcaaggcgg
     1021 ccaccatagc cgcgcgtcag gaagaccggg tgatggccct cgccggccag catcgccgcg
     1081 acggcgagcg ccgccggcgt ctttcccgag ccgccgacgg tgaagttgcc gatgcaggcc
     1141 accggcagcg gcgcccgctg gccccgcgcc cgcatgcgcc gggcggcgat cgctccgtag
     1201 agtgcggcgg gtgctcgcag caggatcgaa gcgggagttg aatgcggccg ccaccagaag
     1261 gcgggcgcgc gcatcagcgc gcctccagct tcatctgcag gatgaacggc tcgatcgact
     1321 gcatggtgcg ggcgacgccg ccgccgagat tgtcgacggt ctctccggcc gcgcgcgaca
     1381 tctcgcgggc caggcgcggg tccgccagga gctcggtgag cgcgcgcaca agcgtcggcg
     1441 cattggggat cggcaaggcg ccgccggcgc ggtcgagcgc ccggtagacg tcggtgaagt
     1501 tgtgcacgtg cgggccatgc aggatggcgc tgccgagctt gaccggttcg atcgggttct
     1561 ggccgccatg cggcacgagc gaaccgccca tgaacacgag cggagccagg cgatagaaga
     1621 ggccgagctc gccgaccgtg tcggcgaggt agacgtcgat gtcgcggctc ggattctcct
     1681 ggccggcgcg ccgggccacg gtcagctgcg ccccgctcgc gatttcggcg gcttcggtgc
     1741 cgcggtgcgg gtggcgcggc gcgatgatgg tcaggagatc cgggaaccgg tccatcaggc
     1801 cgcggtggac gtcgacgatc atctcctctt cgcccggatg ggtgcttgcc gccagccaca
     1861 gcggccgccc ggcgacgagt cccgacaacc tggcgaggac gcgcggatcg gccggcggcg
     1921 gcggggagtc gaacttcaga ttgcccgcca ccgacacccg cgacgcgccg agccgggcca
     1981 gccgctcggc gtcgtcggcg ctctgggcga tgcagagcgc gaagcgctgg aacagggcgc
     2041 gcgcgacgtg cggcagccgc gaccagcgct ggtacgagcg ctccgacagg cggccgttga
     2101 cgaggaccag cgggatgcgc cggcgctcca gctccatgat gatgttgggc cagacctcgg
     2161 attcggcgaa cagcacgaga tccggctgcc agtgatcgag gaagcgctgc acgtagcgcg
     2221 gcacgtcgag cggcacgaat tggtgcatcg ctcccggcgg cagccgccgc gccagcacct
     2281 ccgccgacgt ccttgtgccg gacgtcacga gaacctcgat gccgcgcagc atgagctgct
     2341 cgacgaccgg catcagcgac agcgtctccc cgatgctcgc cccgtgcagc caggcgagct
     2401 ggcctgcggg gcgcccgtgc gtggcccagc cgcgccgttc ctgaagcctt tcgcggtctt
     2461 ccttgccttt gcgctggcgc cacagcagca ggccggcagc ggccggctcg agcgccacga
     2521 gaccgccgcg gtaaagcttg agcaggaagg gcgaatgcgc gctcacgccg gggagccctg
     2581 gcttaggcgc tggcgcggac gcgtcgcggc gccgggatcg cgcgcgccga gcagggcgta
     2641 ggcgcgctcg tgcacttggt cgaggccgtc ctcgacggcg cgccgcgccc cgacgagggc
     2701 cgcctcgtcg gcgtgccggt cgatgaagat cggctcgccg agcaccatgg ccccgcgccc
     2761 gaacggaagg ccgaggctgg cccggtccca gcttgcaaaa tcgatgcgcc gactcgccac
     2821 cactgcaacg ggcacgatcg ggcggccgga cagccgcgcc agggtgatga tgccctcgcc
     2881 gcacacgcgc gcgatcttgg gcacgtcggc ggtcatcacc accatctcgc cggcgtcgag
     2941 cgcgcgcagc atggcgcgca aggcctcggc gccacccttg aggcgcgggt cgcggccgcg
     3001 tgcgccggag ccgcggatgg cgcgcacgcc gaggtggcgc aacgcgatgg cgttgaactc
     3061 gccgtccgcc gagcgcgaca cgaggctcgc cgccgggtcc tgtggccgct tggcgaaatg
     3121 gatcatgaaa tgctggccgt gccacatcgc ggcgatcacc ggcatgtgcg ggccgatccg
     3181 cgcataggcg tcggccggct ccgtcacgaa gcggttcgtg cgctggacga ggccgagata
     3241 gcgcgcgaac aggaaaccca aaagttcctg taccggccgg ctccggctga tccgcttcgc
     3301 aaggctcatc tacgcaaatc gaatcaagcg tccgccgggt cgagcaggcg gtggaggtgg
     3361 acgatgaaat agcgcatctg cgcgttgtcg acggtcgcct gcgccttgcc tttccaggcg
     3421 gcatgcgcgc tggtgtaatt ggggaagacg ccgacgatgt cgagctgcga caaatccttg
     3481 aagtcggtgc tgtcgagatg tgcgagctcg cccccgaaga cgaggtgcag aagctgcttt
     3541 ggtgagctgt ccgtcatgac gtcctcgcct tatccgcgca ggctcatgga ttcgcccggc
     3601 gcctgcgccc tgccttgcat ggccgcgatg agccggggat gcaaccggcg aggcgccgcg
     3661 acaagctcgc catgcaccgg atcggtttgg ttataggccg gcggcacctc atcaagcccg
     3721 ctcaggacgc cgcccgactc tgccaggatc aggtcggcgg cggcaatgtc ccagtcacgg
     3781 gcattggccg acacaagacc ggcatcgacc gccccctccg ccacccgggc gagccgcagg
     3841 gccagggatg ggatccgcgg cggacgcttg aacggcccga tgcgctgctc gagctcgtcg
     3901 agcatgccat tgggcccggc gatgctcacg tcgggcagcc gttcggcggg cgaggcctcg
     3961 atcggctcgc cgtcacgcag ggccccttcc ccccggcgcg cctcgtagag cgtgttgtgg
     4021 gcaggcgcat agaccacgcc gagaaccggc cggccttcgg caagcagcgc gatcgacacc
     4081 gaccagtcgt ggctgccgga caggaaggcg cgcgtgccat cgatcggatc gacgatccag
     4141 accagttgcc ggccgatgcg gctcgggtcg tcggcggtct cctcggagag ccagctcgcc
     4201 tgcggcagcg cttcggacag cttgaccttg aggaaggtgt cgaccgcgac gtcggcctcg
     4261 gtgaccggcg agccgccggc cttcgaccag atccgcgccg acgtcttgag gcccgagcgg
     4321 aagaaccgca tggcgatcgt gccggcctcc cgggcggcat gacggaccac ggggttcagg
     4381 cggcgcgcca ggtgagccgg caggtcagcg gaagagtcca tcgcggcagc gtattttcca
     4441 aacgattcaa gggtcgccct gaccatatgg gaagtcgccg ccggtcgccg caaatggtgg
     4501 cgatcagagc cgtcatggcg tcggcattcg ccgcgtcggg cgggggcagc atggttccgc
     4561 agcactttgt cgccaaggtt gcgaaaccgt aaaaatcggt tccctgctta ggggttccgc
     4621 cgtcgcccgg tcaagcagga cgcggttcct caacgaaagc ttttgttgat catcccgcgc
     4681 aaaagcgcag gcgcaaccgt agcttaaccg ttcctcttaa gccgccgctg cgagcttgca
     4741 cggcattgtc agcacaacgc acaggcggtc cgaatgcaaa gaggccgctg gcagcctgac
     4801 agggcagaca acagagatgg atacgacccc gaccgcgggg gccggctctc ctcgcgggag
     4861 cggccctggc gtccctccca gcgtcgcggc gcacctggcg ctcggcaagc gcatcaccgg
     4921 cgcggcttcg cggctgatcg gccggcatga tgccaggccg gccggcgtgg cgctgcgcct
     4981 cgatcctggc gccgaggcca gcgacgcgtt cgacatcgcg ctcgtcgacg ccaatgcgcg
     5041 gcccttgatg gtcctcggtc cgttcccgga ggaggacgtc gtcgccgtgt ggcgttcgct
     5101 c
//
LOCUS       DATAIQ010000878         2440 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_322621, whole genome shotgun sequence.
ACCESSION   DATAIQ010000878 DATAIQ010000000
VERSION     DATAIQ010000878.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2440)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2440)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2440
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_322621"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..560
                     /gene="tmk"
                     /locus_tag="VHN20_14445"
     CDS             <1..560
                     /gene="tmk"
                     /locus_tag="VHN20_14445"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013166578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004798 - thymidylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HEX2727015.1"
                     /translation="GSPKAEQIRESVLSGAAKAFGPFAEALMFSAARLDHLEQTIRPA
                     LARGEFVLCDRFADSTRAYQGALGRIDAGLIRALERAVVDDTRPHLTIVLDLPAEIGL
                     ARAAARRAGTRADRFEGEDPAFHEALRQAFLDIARQEPGRCVVIDANREPDVVEADIW
                     RVVEERLLPSRPTALVMAGEIDGGR"
     gene            547..1632
                     /locus_tag="VHN20_14450"
     CDS             547..1632
                     /locus_tag="VHN20_14450"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007562995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="HEX2727016.1"
                     /translation="MAADNDDRVEPDQLPGVPHPRQQFALFGHGDAEAAFLEAWRAGR
                     LHHAWLIGGPEGIGKATLAYRVARFLLADRPGRPGNAASLTIDADQPVARQVAALSHP
                     NLAVLRRAPATDKKAASATIPVDAVRRAVSLFGSTAADGGYRVCIVDSAEDLTISSAN
                     ALLKLVEEPPPRSAFLIVSHAPQRVLPTIRSRCRRLQLQPLADRDLRAVIGSLGAPWA
                     DVDAPKLDRAVAAAEGSVRRAIEMLDESNLTLVAEVKALLEALPRVDEKRVLTLAENL
                     ARRDADAAYALMLDTLSGWVSQQLNDKAALGAARLAPLVEVCEKVARAARDTDVYNLD
                     RRPLVLATFGDLADAVRRLREPEQSFA"
     gene            1645..>2440
                     /locus_tag="VHN20_14455"
     CDS             1645..>2440
                     /locus_tag="VHN20_14455"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004825 - methionine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HEX2727017.1"
                     /translation="MADKFYITTAISYPNGPPHIGHAYEVIASDAIARFKRLDGHDVY
                     FVTGTDEHGQKIQQTAARNATTPRAFVDEMAPKFRAMAERLWCSFDRFIRTTDADHLP
                     STQELWRRMERRGDIYLSTYSGWYSVRDEAYYDESELTKAPDGSWMAPTGTPVEWVEE
                     ESYFFRLSAYQDRLLAHYTAHPEFIGPDTRRNEIVSFVRGGLQDLSISRTTFDWGLPV
                     PGSPQHVMYVWVDALNNYVTACGFPDESSPRWRYWPADVHIIGKDIV"
BASE COUNT          369 a          880 c          829 g          362 t
ORIGIN      
        1 ggggctcgcc caaggccgag cagatccgcg agagcgtgct gtccggcgcg gccaaggcct
       61 tcggcccgtt cgccgaggcg ctgatgttct cggcggcgcg cctcgatcac ctcgagcaga
      121 cgatacggcc ggcgctggcg cgcggcgaat tcgtcctgtg cgaccgcttt gccgattcca
      181 cccgcgctta ccagggcgcg ctcggccgta tcgacgcagg cctgatccgc gcgctcgagc
      241 gggccgtcgt cgacgacacc cggccgcatc tgaccatcgt gctcgacctg cccgccgaga
      301 tcggcctcgc gcgggcggcg gcgcgccgcg ccgggaccag ggcagaccgg ttcgaaggcg
      361 aggaccccgc gttccacgag gcgctgcgcc aggccttcct cgacatcgcc cggcaggaac
      421 ccgggcgctg cgtcgtcatc gatgccaacc gcgagcccga cgtggtcgag gccgatatct
      481 ggcgcgtggt cgaggagcgg ctgctgccgt cgcggccgac ggcgctggtg atggcgggag
      541 aaatcgatgg cggcagataa cgacgacagg gtggagccgg accagctgcc cggcgtgccg
      601 cacccgcgcc agcagttcgc gctgttcggc cacggcgacg ccgaggcggc gttcctcgag
      661 gcctggcgcg ccggccggct gcatcacgcc tggctgatcg gcggtcccga agggatcggc
      721 aaggcgacgc tggcgtatcg cgtcgcccgc ttcctgctgg ccgaccgccc gggccggcca
      781 ggcaacgccg cgagcctgac gatcgatgcg gaccagcccg tggcgcggca ggtcgcggcc
      841 ctgtcgcatc cgaacctcgc cgtgctgcgg cgcgcacccg cgacggacaa gaaggccgcc
      901 tcggccacga tcccggtcga cgcggtgcgg cgggcggtgt cgctgttcgg ctcgaccgcc
      961 gccgacggcg gctatcgcgt ctgcatcgtc gacagcgccg aggacctgac gatctcgagc
     1021 gccaacgcgc ttctcaagct ggtcgaggag ccgccgccgc gatccgcctt cctgatcgta
     1081 agccatgcgc cgcagcgcgt cctcccgacc atccgctcgc gctgccgccg gctgcagctg
     1141 cagcccctcg cggaccgcga cctgcgcgcg gtgatcggct ccctcggcgc accatgggcc
     1201 gacgtcgacg cgccgaagct cgaccgggcc gtcgccgccg cggaagggtc cgtgcgccgc
     1261 gccatcgaga tgctcgacga gtccaacctg acgctggtgg cggaggtcaa agccttgctc
     1321 gaggcgctgc cgcgcgtcga cgagaaacgc gtcctcacgc tcgctgagaa cctggcgcgc
     1381 cgcgacgcgg atgccgccta cgcactgatg ctcgacacct tgtcagggtg ggtctcccag
     1441 cagctgaacg acaaggcggc gcttggtgcg gcgcgccttg cgccgctcgt ggaggtgtgt
     1501 gagaaggtcg cgcgcgcggc gagggacacc gatgtctata acctcgaccg gcggcctctc
     1561 gtcctggcca cgttcggcga tctcgccgac gccgtgcgtc ggctgaggga accggagcag
     1621 tcgttcgcct gaatgggtct tcgaatggcc gacaaattct atatcacgac ggccatctcc
     1681 tacccgaacg gtcctcctca tatcggccac gcctacgagg tgatcgcgag cgacgccatc
     1741 gcccgcttca agcggctcga cgggcacgac gtgtatttcg tcaccggcac cgacgagcac
     1801 ggccagaaga tccagcagac cgccgcccgc aacgcaacca cgccgcgcgc cttcgtcgac
     1861 gagatggcgc cgaaattccg cgccatggcc gagcgcctgt ggtgctcctt cgaccgcttc
     1921 atccgcacga ccgacgccga tcacctgccg tcgacgcagg aattgtggcg ccgcatggag
     1981 aggcgagggg acatctacct gtccacctat tccggctggt attcggtccg cgacgaggcg
     2041 tattacgacg aaagcgagct gaccaaagcg cctgacggct cgtggatggc gccgaccggc
     2101 acacccgtcg agtgggtcga ggaggagagc tacttcttcc gtctctcggc gtaccaggac
     2161 cggctgctcg cgcattatac ggcgcatccg gaattcatcg gccccgacac gcgccgcaac
     2221 gagatcgtga gcttcgtgcg cggcgggctg caggatcttt cgatcagccg caccaccttc
     2281 gactggggcc tgcccgtgcc gggcagcccg cagcacgtga tgtacgtctg ggtcgacgcg
     2341 ctcaacaact acgtgaccgc gtgcggcttt cccgacgaga gctcgccgcg ctggcgctac
     2401 tggccggccg atgttcacat catcggcaag gacatcgtgc
//
LOCUS       DATAIQ010000879         2021 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_415195, whole genome shotgun sequence.
ACCESSION   DATAIQ010000879 DATAIQ010000000
VERSION     DATAIQ010000879.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2021)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2021)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2021
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_415195"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(222..>2021)
                     /locus_tag="VHN20_14460"
     CDS             complement(222..>2021)
                     /locus_tag="VHN20_14460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HEX2727018.1"
                     /translation="NSPAVRSPSMAKSSRKPSPKRLGAPDIARALAELGQRTALAGGN
                     PYSARAYERAAQSLAALTTPLADVIARGELRDIPGVGPAIAETIRELYETGTHARLEA
                     LRGAVPSGVLEMLRVPGLRPDKILRLHQDFGIASVAELEEACRAGRLQDRKGFGPALQ
                     ARILQGLETLRHGDGQRLIHRAAQLLEAAQKNLARSHPELRRIVPAGDLRRGCELVGD
                     LSLVAEGPQGSGIETMRLNDEITLAIAEPSRYGLALLFATGAADHLRQLQVFAAEHGC
                     DLTPAALRRGKRALVCPDENAIYEALGLPFIAPELREGRGEIERGAARRLPTLIDQTD
                     LTGLLHCHTDASDGAHDLKTMADATRKRGYTYFGVADHSRSAAYAGGLSLDEIADQHA
                     HVDKLNRGYRGSFHIFKGIESDILRDGSLDYEDEVLGGFDFVVASVHSQFRLPQAVQT
                     ERIIRAVRNPHTTILGHMTGRMLLRRPGYEIDIEAVLKACAECGVAVEINGNPNRLDL
                     DWRWHQHALELGCMLSINPDAHSTAELDLTAWGVVMARKGGVPKERVLNCLDREALRA
                     HFEGRKRSRRSVPQRAHTGGSRKRPHARADSIE"
BASE COUNT          316 a          658 c          710 g          337 t
ORIGIN      
        1 cggcgccgac cgggccgccg acgatggcgc cgccgaccgc accggtcgtc gcgcctgctg
       61 ccgcgccgcc gccagactgc gcaaaggcgg gaccggccag cagtacgagg gccgcgcccg
      121 cggcaagaac ggtatgtctc atgagtaact cctgaattgc tatcgattac caacggcgtc
      181 ggggagcaat ggttcctcat taaacatcag aaatatgtaa tttactcgat gctgtctgcg
      241 cgcgcgtgag gccgcttgcg gctgccgccg gtgtgggccc tttgtggcac tgatctgcgc
      301 gaccgcttgc gtccctcgaa atgcgcgcgc agcgcctcgc gatcgaggca attgagcacg
      361 cgctccttcg gcacgccgcc cttgcgcgcc atgacgacgc cccacgcggt aaggtcgagt
      421 tccgcggtcg aatgcgcgtc gggattgatg ctgagcatgc agccgagctc gagcgcgtgc
      481 tgatgccaac gccagtcgag gtccagccgg ttggggttgc cattgatctc gaccgcgacg
      541 ccacattcgg cacaggcctt gaggactgct tcgatatcga tctcatagcc gggccgacgg
      601 agcagcatgc ggccggtcat atggccaagg attgtcgtat gcggattgcg cactgcgcgg
      661 atgatgcgtt ctgtctgcac cgcttgcggg agcctgaact ggctgtgcac gctcgccacg
      721 acaaagtcga atccgccaag gacctcgtcc tcataatcga gcgagccgtc gcgcaggatg
      781 tcggactcga tgcctttgaa gatgtggaag ctgccgcggt aaccgcgatt gagcttgtcg
      841 acatgtgcat gctgatcagc gatctcgtcg agcgacagcc cgccggcgta agctgcactc
      901 ctggaatggt cggcgacgcc gaaatacgtg tagccgcgct tgcgcgtggc gtcggccatc
      961 gtcttgaggt cgtgggcgcc atcggaggcg tcggtatggc agtgcaggag gccggtgagg
     1021 tcggtctggt cgatcagtgt cggcagccgg cgagcggcgc cgcgctcgat ctcgccgcgg
     1081 ccctcgcgca actcgggcgc gatgaaaggc agccccaaag cctcgtagat cgcgttctca
     1141 tccgggcaga ccaaggcgcg cttgccgcgc ctgagcgccg ccggcgtgag gtcgcagccg
     1201 tgctcggcgg cgaacacctg cagctgacgc agatgatcgg ccgcgccggt cgcgaacagg
     1261 agcgcgagtc cgtagcgcga cggttcggcg attgcgagcg tgatctcgtc gttcagccgc
     1321 atcgtctcga tgcctgatcc ctgcggcccc tcggccacga ggctcaggtc gccgaccagc
     1381 tcgcagccgc gccggagatc acctgccggc acgatgcggc gcagctcggg atgcgagcgc
     1441 gcaagatttt tttgcgccgc ctcgaggagc tgggcggcgc ggtggatcag acgttgccca
     1501 tctccgtgac gcagggtttc gaggccctgc aggatacgtg cctgcagcgc cggcccgaaa
     1561 cctttgcggt cctggagccg gccggcccga cacgcctctt ccagctcggc gacgctggcg
     1621 atcccaaaat cctggtgcag gcgcaagatc ttgtcgggcc tgaggccggg gacgcgcagc
     1681 atctcgagca cgccggacgg aacggcgccg cgcaaggcct cgagccgggc atgcgtgccc
     1741 gtctcgtaca gctcgcggat ggtctcggcg atcgccgggc cgacgcccgg gatgtcgcgc
     1801 agctctcccc gggcgatcac gtccgcaagc ggcgtggtca gggcggcgag gctctgcgcc
     1861 gcccgctcgt aggcgcgggc gctgtacggg ttcccgccgg caagggcggt gcgctgcccg
     1921 agctcggcca gcgcgcgtgc gatgtctggg gcgccaaggc gctttggaga gggcttgcgg
     1981 gacgacttcg ccatggaggg ggaacgcacg gcgggggaat t
//
LOCUS       DATAIQ010000880         2949 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_138430, whole genome shotgun sequence.
ACCESSION   DATAIQ010000880 DATAIQ010000000
VERSION     DATAIQ010000880.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2949)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2949)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2949
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_138430"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1248
                     /locus_tag="VHN20_14465"
     CDS             <1..1248
                     /locus_tag="VHN20_14465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018260482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEX2727019.1"
                     /translation="LLVILCAAPAQAQLRGHGGPVRALVVSPDGKTAMSGSFDQSAII
                     WALDRGAALQVLRFHDGAVNAAAVLPDGRFVSGGEDGRIAVWRTGEATPAQIIEAHKA
                     PIAGLAVSQDGTRIASASWDGTARVTPLSGGTVRVLQGHHGNVNAVAFLADGRIATAG
                     YDATVRIWPEDDRPPAVITLPTPLNAIAVTGDGEIVTAGADGLVRILNAGNRMRATVE
                     AQTTPIIGLALSPDGTRIAAAAIAGSVAVIDRAAAKVLFNLVGPGLPVWSLAFRPDGR
                     ELLTGGSDRVVRRWDMSNGEHIGEVVLNRPEDFLAGFTGDRGAELFQACAACHTLTPD
                     GGNRAGPTLHRVFGRRIATAAGYNYSESLKQLDIVWNAETIARLFEVGPSQYTPGTKM
                     PEQHINTAEDREALVRFLEKATK"
     gene            complement(1269..1985)
                     /locus_tag="VHN20_14470"
     CDS             complement(1269..1985)
                     /locus_tag="VHN20_14470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012334802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEX2727020.1"
                     /translation="MKSGAAAAALALTLLGGQGAAAESRSDTFVSGGKPVTAEWFAAS
                     GRDGSAPAVLILHGADGMTVPERYRFGARALAAAGYHVLLVRYFERTGGNGRADWARL
                     RDDAPLWVETVRDAVGHVARQPGVDADRIAVVGFSLGASLALAAAGKDPRIKAVVDVF
                     GPFPSGADNAARTPPVLILHGARDRVVPVEHAHRLEALLKARGVPHEVTIYPDQGHGF
                     FGAAQIDAASRILGFLGRHL"
     gene            complement(2136..2393)
                     /locus_tag="VHN20_14475"
     CDS             complement(2136..2393)
                     /locus_tag="VHN20_14475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727021.1"
                     /translation="MIEDLPEIREQLSRHWQKAGIDLVKHGFRPEAIFETMLTVGLAG
                     FVEMHGKEASAQRLLTLAQRLSDQVAKEAEAAEEAKRATKN"
     gene            complement(2565..2858)
                     /locus_tag="VHN20_14480"
     CDS             complement(2565..2858)
                     /locus_tag="VHN20_14480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727022.1"
                     /translation="MNKALSLGLAAACIVTSVAAQPRPSSVAMTCPQAASLVASRGAI
                     VLGTGGYTYDRFVAHRGFCLITEMTEPAWIPTRDTPQCFVGYRCKEAEFFLDR"
BASE COUNT          455 a         1017 c         1043 g          434 t
ORIGIN      
        1 cttctcgtga tcctctgtgc cgcgccggcg caggcgcagc tgcggggcca cggcggcccg
       61 gtgcgcgcac tcgtcgtttc acccgacggc aagacggcga tgtccggcag cttcgaccag
      121 tcggcgatca tctgggcgct cgatcgcggc gcagctttgc aggtgctgcg cttccatgac
      181 ggcgccgtga acgcagccgc ggtgctgccc gacggccgct tcgtgtcagg cggcgaggac
      241 ggacggatcg ccgtgtggcg gaccggcgag gcaacgcccg cacagatcat cgaggcgcac
      301 aaggcgccga tcgccggcct cgccgtgtcg caggacggca cgcgcatcgc ctcggcgtcg
      361 tgggacggga ctgcccgcgt cacgccgctc tcgggcggca ccgtgcgggt gctgcagggg
      421 catcacggca acgtcaacgc ggtcgctttc ctcgccgacg ggcgcatcgc caccgccggc
      481 tacgacgcca ccgtgcgcat ctggcccgag gacgaccggc cgcccgcggt catcaccttg
      541 ccgacgcctc tcaacgccat cgccgtcacg ggcgacggcg agatcgtcac cgccggcgcc
      601 gacggcctcg tgaggatcct caatgcgggc aaccggatgc gggccacggt cgaggcgcaa
      661 accacgccga ttatcgggct cgcgctgtcg ccggacggga cgcggatcgc cgcggcggcg
      721 atcgcgggct cggtcgccgt gatcgaccgc gccgccgcca aggtgctgtt caacctcgtc
      781 gggccaggcc ttcccgtctg gtcgctcgcc ttccggccgg acgggcgcga gcttctgacg
      841 ggcggcagcg accgggtggt gcggcgctgg gacatgagca acggcgaaca catcggtgaa
      901 gtggtgctga accggcccga ggattttctg gccgggttca cgggcgatcg cggtgccgaa
      961 ctgttccagg cctgcgccgc gtgccacacc cttacgcccg acggcggcaa ccgcgccggg
     1021 ccgacgctgc accgggtgtt cggccgccgc atcgcaacgg cggccggcta caactactcc
     1081 gagtcgctga aacagctcga catcgtgtgg aacgcggaaa ccatcgccag gctgttcgag
     1141 gttggcccgt cgcaatatac gccgggcacg aagatgccgg agcagcacat caacacggcc
     1201 gaggatcgcg aggcgctggt gcgtttcctg gaaaaggcga cgaaatagcc ggcgggcggg
     1261 agcggcttct acagatgccg gcccaggaag ccgagaatgc ggctggcggc atcgatctgc
     1321 gcggcgccga agaagccatg accctggtcc gggtagatgg tgacctcgtg gggcacgccg
     1381 cgggccttca ggagcgcttc gagacgatgc gcatgctcga ccggcacgac gcggtcgcgc
     1441 gcgccgtgga ggatcaggac cggcggcgtg cgcgccgcgt tgtcggcgcc tgaggggaaa
     1501 gggccgaaga cgtcgaccac ggccttgatg cgcggatcct tgccggccgc ggcgagggcc
     1561 agcgacgcgc ccagggagaa cccgaccacg gcgatgcgat ccgcatcgac gcccggctgg
     1621 cgggcgacat ggccgacggc gtcacgcact gtctcgaccc acagcggcgc gtcgtcacgc
     1681 agccgcgccc agtcggcccg gccattgccg ccggtgcgct cgaaatagcg caccaggagc
     1741 acgtggtagc cggccgccgc gagcgcccgc gctccgaagc ggtagcgttc cggaaccgtc
     1801 atcccgtccg ccccgtgcag gatcagcacg gccggcgccg acccgtcgcg gccgctcgcc
     1861 gcgaaccact cggccgtgac cggcttgccg ccgctgacaa acgtgtccga gcgcgactcg
     1921 gcggccgcgc cctggccgcc gagcaaggtc aaggcgagcg cagcggccgc cgcaccgctt
     1981 ttcatagctg ttctccaggg aaggtcggga aggtgagcca ggaatatggg atggcgaggc
     2041 gctgattgcc atccaacctg cccctcgcgg gagagccggg gaacccggct gcgcccgcgt
     2101 cggccgcgcg gccacgccgg cgggaccagc gtgatctagt tcttggtggc gcgtttcgct
     2161 tcttcggcgg cctcggcttc cttggcgacc tgatcggaca ggcgctgcgc cagcgtcagg
     2221 agccgctgcg cgctcgcttc cttgccgtgc atctcgacaa agccggcaag gccgaccgtc
     2281 agcatggtct cgaagatcgc ttccgggcgg aagccgtgct tcaccaggtc gattccggcc
     2341 ttctgccagt gacggctcaa ctgctcgcga atttcgggga gatcttcgat catggcgcgt
     2401 cttagccgat cctgcgccgg ctgtcgcgcg ctttgctgca ggcacatcgt cacctggcgc
     2461 cagagcggca tgcgatcgca atcgtcccgc cccgggtgtg tccggacggt gccttcccgc
     2521 tcggccaaag tcatcgctcg tggcgagtga cgctgcgatc agccttagcg gtcgagaaag
     2581 aactcggcct ctttgcagcg gtagccgacg aaacattgcg gcgtgtcgcg ggtgggaatc
     2641 caggccggct cggtcatctc ggtgatcagg caaaagccgc gatgggcgac gaagcgatca
     2701 taggtgtagc cgccggtgcc aagcacgatg gcgccgcgcg aggcaacgag gctggcggcc
     2761 tgggggcagg tcatggcgac gctcgagggg cgcggctgag cagcaacgct cgttacgatg
     2821 caggcagccg caaggcctaa ggacagggct ttgttcatgg cgctctcctg tccggatgtc
     2881 atccggtcca gcttgaggaa gccgcgacgc aatacttcag ctttcctccg ccgaaccagc
     2941 tgagctgcc
//
LOCUS       DATAIQ010000881         2501 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_251446, whole genome shotgun sequence.
ACCESSION   DATAIQ010000881 DATAIQ010000000
VERSION     DATAIQ010000881.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2501)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2501)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2501
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_251446"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            165..932
                     /gene="pgeF"
                     /locus_tag="VHN20_14485"
     CDS             165..932
                     /gene="pgeF"
                     /locus_tag="VHN20_14485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015823178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan editing factor PgeF"
                     /protein_id="HEX2727023.1"
                     /translation="MPIEAPELRSPHVRHAFFTREGGVSTGIYGSLNGGIGSSDDAAH
                     VAENRRRMAERFGIPDTALVSLYQIHSAEAVIVERPWGRDARPRADAMATRVPGIALA
                     ISTADCGPVLFADAEARVIGAAHAGWRGALGGVLEATLAAMESLGAARRRVTAVLGPT
                     ISQAAYEVGPELVDGFRQADPGNERFFRPGARDGHAMFDLPGYIGARLRKAGVGTVAD
                     LGRCTYREETLFYSYRRTTHRGEPDYGRLISAIALTP"
     gene            complement(922..1677)
                     /locus_tag="VHN20_14490"
     CDS             complement(922..1677)
                     /locus_tag="VHN20_14490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009494592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX2727024.1"
                     /translation="MSPVALVTGGAKRIGRAIALRLAQAGYGVAIHCQHSRAEATDVE
                     AAITGSGGRAGIFEADLADADALTRLVSDAAAALGPLTLLVNNASVFEADEVQNVAAD
                     LWDRHFDINLRAAVFLTRDFARQVPESGEGAVVNIIDQRVWKPTPQFFSYTLSKAALF
                     TATRTMAQALAPRIRVNAVGPGPTLTSPRQSQDDFARQASALPLGHGPTPEDIAEAVA
                     FLAKAQSVTGQMLAVDGGQHLAWQTPDIVGVTE"
     gene            complement(1674..2279)
                     /locus_tag="VHN20_14495"
     CDS             complement(1674..2279)
                     /locus_tag="VHN20_14495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HEX2727025.1"
                     /translation="MLVLRSSPPSPFGRKVKIAAALLGLSDRISIEKADTNDPNEKLR
                     TQNPLGKIPALILENGETLYDSRVILEFLDCLAGGGRLIPAGWARFEALRQQALADGI
                     MDASILQVYEARWRPEERREQKWVDHQRGKVERALEVAEATMSMPAQSIHVGHVALAC
                     ALGYLDLRFDGRWRRDHPKLAAWLADFEARVPAYGETRVVS"
     gene            complement(2339..>2501)
                     /gene="rlmJ"
                     /locus_tag="VHN20_14500"
     CDS             complement(2339..>2501)
                     /gene="rlmJ"
                     /locus_tag="VHN20_14500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012452790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0070475 - rRNA base methylation [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="23S rRNA (adenine(2030)-N(6))-methyltransferase
                     RlmJ"
                     /protein_id="HEX2727026.1"
                     /translation="DPARLNGSGLFVVNPPWPLEGEARRILPALARRLARTGYGAFRC
                     NWLRETAET"
BASE COUNT          347 a          922 c          869 g          363 t
ORIGIN      
        1 ggcgagcgcg gctcaggcga ccgacatcgc gcgcgcgctc gaccgcctca ccggctccgc
       61 ccggaacgag atggggacgc tgttcaaggc cctagcccta ggccatccgc agctgacctc
      121 cctgcccggc tttcctgctg caaaccagtc ctgaagtccc gtccatgccg atcgaagccc
      181 ccgaactgcg ctctccccat gtccgccacg ccttcttcac ccgcgagggc ggcgtctcga
      241 cgggcattta tggctcgttg aacggcggca tcggctcgtc cgacgacgcc gcgcacgtcg
      301 ccgagaaccg ccgccggatg gcggagcgtt tcggcatccc cgacaccgcc ctggtgagcc
      361 tctaccagat ccattcggcc gaggcggtca tcgtcgagcg gccctgggga cgcgacgctc
      421 ggccgcgcgc cgacgccatg gcgacgcgcg tgcccggcat cgccctcgcc atctcgacgg
      481 ccgattgcgg ccccgtcctg ttcgccgatg ccgaggcccg ggtgatcggc gccgctcacg
      541 cgggctggcg cggcgccctc ggcggcgtcc tcgaggcgac gctggcggcc atggagtcgc
      601 tcggcgccgc gcgccgccgc gtcacggccg tgctcggccc caccatcagc caggcggcct
      661 acgaggtcgg ccccgagctg gtggacggtt tccggcaggc cgatccgggc aacgagcgct
      721 tcttccggcc cggcgcccgc gacggtcacg ccatgttcga cctgccgggc tatatcggcg
      781 cgcgcctgcg caaggccggc gtcggcaccg tcgccgatct cggccgctgc acatatcgcg
      841 aggagacgct gttctacagc taccgccgca cgacgcaccg cggcgagccc gattacgggc
      901 ggctgatctc ggcgatcgcg ctcactccgt gacgccgacg atatcgggcg tttgccaggc
      961 gagatgctgg ccgccgtcga cggccagcat ctggcccgtg acgctctgcg ccttggccag
     1021 gaacgcgact gcctcggcga tgtcttccgg cgtcgggccg tggccgagcg gcagcgcgct
     1081 ggcctgcctg gcgaaatcgt cctggctctg gcgcgggctg gtcagcgtcg gccccggccc
     1141 gacggcgttg acgcggatgc gcggcgccag cgcctgggcc atggtgcggg tggccgtgaa
     1201 cagcgcggct ttcgacagcg tgtacgagaa gaattgcggg gtcggcttcc agacgcgctg
     1261 atcgatgatg ttgacgaccg cgccttcgcc gctctcgggc acctggcgcg cgaagtcgcg
     1321 ggtcaggaag acggcggcgc gcaggttgat gtcgaaatgc cggtcccaga gatccgcggc
     1381 gacgttctgg acctcgtcgg cctcgaacac cgaggcgttg ttcacgagca gcgtgagcgg
     1441 ccccaaagcc gccgccgcat cgctcaccag ccgggtgagc gcgtccgcgt cggcgaggtc
     1501 tgcctcgaaa atcccggcgc gcccgccgct gcccgtgatc gccgcctcga catccgtcgc
     1561 ctcggcgcgc gagtgctgac aatggatggc gacgccgtag cccgcttgcg ccagccgcag
     1621 ggcgatggcg cggccgatcc gcttcgcccc gcccgtcacc agcgcgaccg ggctcatgaa
     1681 acgacccgcg tctcgccgta ggccgggacc cgcgcctcga aatcggcgag ccacgccgcc
     1741 agcttcggat ggtcccggcg ccagcgcccg tcgaagcgca ggtccaggta gccgagcgcg
     1801 caggcgagcg ccacgtggcc gacatggatg ctttgcgccg gcatcgacat ggtggcctcg
     1861 gcgacctcga gcgcgcgctc gaccttgccg cgctggtgat ccacccattt ctgctcgcgc
     1921 cgctcttccg gccgccagcg cgcctcgtag acctgcagga tggacgcatc catgatgccg
     1981 tcggcgaggg cctgctggcg caacgcctcg aagcgcgccc agccggccgg gatcagccgg
     2041 ccgccgcccg ccaggcaatc gaggaactcg aggatgacgc gggaatcgta gagggtctcg
     2101 ccgttctcca ggatcagcgc cgggatcttg ccgagcgggt tctgcgtgcg cagcttttcg
     2161 ttcgggtcgt tggtgtcggc cttctcgatg gagatgcgat ccgacaggcc gagcagcgcc
     2221 gccgcgatct tgaccttgcg gccgaacggc gacggcggcg aggaacgaag cacgagcatg
     2281 acaaaatccc cttgcagacg cgcgcttgtc ccgcaagcgg ggccgctcgg caaccccatc
     2341 aggtctcggc cgtctcgcgc agccagttgc aacgaaaggc gccgtaaccc gtgcgcgcca
     2401 ggcggcgcgc gagcgccggc aggatgcggc gggcctcgcc ttccagcggc cacggcgggt
     2461 tgacgacgaa caggcccgag ccgttgaggc gcgcgggatc g
//
LOCUS       DATAIQ010000882         2145 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_460776, whole genome shotgun sequence.
ACCESSION   DATAIQ010000882 DATAIQ010000000
VERSION     DATAIQ010000882.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2145)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2145)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2145
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_460776"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..328
                     /locus_tag="VHN20_14505"
     CDS             <1..328
                     /locus_tag="VHN20_14505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012589185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="CreA family protein"
                     /protein_id="HEX2727027.1"
                     /translation="VPERGGLKGMFGVAEEVSDISLACRQVGPIRFKEKFEQGAVVFS
                     ERRSLIFKRMRIVRGCDAKRNVLVYMVYSDRPIEGSPKNSTSSVPIMPWGGGAAEIPR
                     CKEWVG"
     gene            complement(370..699)
                     /locus_tag="VHN20_14510"
     CDS             complement(370..699)
                     /locus_tag="VHN20_14510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010683832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727028.1"
                     /translation="MMRRAIALSGFVTILAVAAASLIVLPNGTSRAAGGETTFLIAAT
                     DGYGVADCLTGGTECGSIVANAWCESQGFSRAESFGLAAPETVTGSAQVGLTARSERP
                     ISITCIN"
     gene            995..>2145
                     /gene="cysS"
                     /locus_tag="VHN20_14515"
     CDS             995..>2145
                     /gene="cysS"
                     /locus_tag="VHN20_14515"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012255788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004817 - cysteine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006423 - cysteinyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HEX2727029.1"
                     /translation="MAPKLRLYNTLTRGKEDFVPLDPGNVRMYVCGPTVYDDAHIGNA
                     RPIIVFDLLFRLLRSLYGPDHVTYVRNVTDVDDKINARAAERGISIRELTESTLKRFH
                     DDVAALGVLAPTVEPRATEYIGEMKTLIERLVAAGHAYVAEEHVLFSVPSMPDYGALS
                     KRPLDELEAGARVEVAPYKRSPLDFVLWKPSKPGEPAWPSPAGIAAPGRPGWHIECSA
                     MSWKHLGEVFDIHAGGIDLVFPHHENEVAQSRCCFGTDVMARYWLHNGFLQVEGEKMA
                     KSAGNFVTIRELRATDNFGGRSWPGDVLRLAMLRTHYRQPIDWTVRALEEAERTLTRW
                     QRRLGESRDVQPIQDDQFLSLLGDDLNTPAAISRVHELINWGRWADPSAP"
BASE COUNT          385 a          703 c          696 g          361 t
ORIGIN      
        1 ggtgcccgag cgcggcggcc tcaagggcat gttcggcgtg gccgaggagg tctcggacat
       61 ctccctcgcc tgccggcagg tcggcccgat ccgcttcaag gagaaattcg agcagggcgc
      121 cgtcgtgttc agcgagcgcc gctcgctgat cttcaagcgc atgcgcatcg tgcgcggctg
      181 cgacgccaag cgcaacgtgc tcgtctacat ggtgtattcc gaccggccga tcgaaggctc
      241 gccgaagaac tcgacgtcga gcgtgccgat catgccgtgg ggcggcggcg cggccgagat
      301 cccgcgctgc aaggaatggg tgggatgaat tcctctcccg caagcgggag agcgggcttc
      361 gagagggaat tagttaatgc aggtgatgga gatcgggcgc tcggagcgcg ccgtcagccc
      421 gacctgggcc gagccggtga ccgtctccgg ggccgccagg ccgaaacttt ccgcccggct
      481 gaagccctgc gactcgcacc aggcattggc gacgatgctg ccgcattcgg tgccgccggt
      541 caggcagtcg gcgacgccgt agccgtccgt cgcggcgatc aggaaggtgg tctcgccccc
      601 ggccgcccgg gaggtgccgt tcggcaggac gatcagggag gcggccgcaa cggcgagaat
      661 cgtcacgaac ccggacaggg cgatggcgcg gcgcatcatg aatgcctcaa taaaaggaac
      721 gatgtgttgt cagttttcgg gtttgcgatg aaaaaactct taaacctgcg ctttgcctgg
      781 aaatacggcc tgcccccagc aaatcgcgtc aacgttaacc ccatcgcgtc ttgacggatt
      841 cggccagacg aggcaaacac ttcgccctat gacggccccg cggatcagcg cgatcatcat
      901 tatctgtggc tagcgtacca cgctggctgg agccgtctcg ttctcaattt cggatcgaaa
      961 cagccttccg gccggcggcc tggagatcgg tttcatggcg ccgaaattgc ggctctataa
     1021 caccctgacc cgcggcaagg aggacttcgt ccccctcgat cccggcaacg tgcgcatgta
     1081 cgtctgcggg ccgacggtct atgacgacgc ccatatcggc aacgcccgcc ccatcatcgt
     1141 cttcgacctg ctgttccggc tgctgcgcag cctctacggg cccgatcacg tcacctatgt
     1201 ccgcaacgtc acggacgtcg acgacaagat caacgcgcgc gcggccgagc gcggcatctc
     1261 gatccgcgag ctgaccgaga gcacgctgaa gcgctttcac gacgacgtcg ccgctctcgg
     1321 cgtgctggcg ccgacggtcg agccgcgcgc caccgaatat atcggcgaga tgaagacgct
     1381 catcgagcgg ctcgtcgctg cgggccacgc ctacgtggcc gaggagcatg tgctgttcag
     1441 cgtgccgtcg atgcccgatt acggcgccct ctcgaagcgc ccgctcgacg aactggaagc
     1501 gggcgcgcgc gtcgaggtcg ccccgtacaa gcgctcgccc ctcgatttcg tgctgtggaa
     1561 gccgtcgaag ccgggcgagc cggcctggcc gtcgccggcc ggcatcgctg cgcccgggcg
     1621 gcccggctgg cacatcgaat gctcggcgat gtcgtggaag catctcggcg aggtgttcga
     1681 catccatgcc ggcggcatcg atctcgtgtt tccccaccac gagaacgagg tcgcgcagtc
     1741 gcgctgctgc ttcggcaccg acgtgatggc gcgctactgg ctgcacaacg gcttcctcca
     1801 ggtggaaggc gagaagatgg ccaagtccgc cggcaacttc gtcaccatcc gcgagctgcg
     1861 cgccaccgac aatttcggcg gccgcagctg gccgggcgac gtgctgcgcc tcgccatgct
     1921 gcgcacgcat taccggcagc cgatcgactg gacggtgcgg gcgctggagg aagccgaaag
     1981 aacgttgacg agatggcaac gacgacttgg agagagccgt gacgttcaac ctatacaaga
     2041 cgatcagttc ctcagcttgc tcggagatga tctcaacaca ccggccgcca tctcacgtgt
     2101 tcatgaactc ataaattggg gacgatgggc cgatccatcg gcacc
//
LOCUS       DATAIQ010000883         3206 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_322900, whole genome shotgun sequence.
ACCESSION   DATAIQ010000883 DATAIQ010000000
VERSION     DATAIQ010000883.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3206)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3206)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3206
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_322900"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(233..910)
                     /gene="aat"
                     /locus_tag="VHN20_14520"
     CDS             complement(233..910)
                     /gene="aat"
                     /locus_tag="VHN20_14520"
                     /EC_number="2.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010683409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008914 - leucyl-tRNA--protein transferase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl/phenylalanyl-tRNA--protein transferase"
                     /protein_id="HEX2727030.1"
                     /translation="MHGGGRLEITPDILLKAYAAGIFPMAEDADDPSLFWVEPQERGV
                     IPLDAFHLPKRLARTLRADTFEVRVDHDFDAVISGCAEPGHDRDKTWINARIRRLYGE
                     LYDLGYCHTVEVYEDERLVGGLYGVSLGAAFFGESMFHRARDASKVALAHLVARLRRG
                     GFTLLDTQFVTDHLVQFGAVEVPRRVYKRMLRDAIETPADWSAWPRDRAVPGAEVVRA
                     LRNGGPA"
     gene            complement(1088..2443)
                     /gene="accC"
                     /locus_tag="VHN20_14525"
     CDS             complement(1088..2443)
                     /gene="accC"
                     /locus_tag="VHN20_14525"
                     /EC_number="6.3.4.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015932460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_function: GO:0004075 - biotin carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HEX2727031.1"
                     /translation="MFDKILIANRGEIALRILRACKELGIATVAVHSTADADAMHVRL
                     ADESVCIGPPTARDSYLNIPALIAACEITGADAVHPGYGFLSENARFAEVLAGHHITF
                     IGPKAEHIRIMGDKIEAKRTAKRLGIPCVPGSEGGVADEGEAKRVAADIGYPVLIKAA
                     AGGGGRGMKVARSEEDLAHALATARTEALAAFGDDAVYIEKYLEKPRHIEIQVLGDGQ
                     GHAIHLGERDCSLQRRHQKVWEEGPSPALNAAERERIGGTVATAMQQLGYAGAGTVEF
                     LYENGEFYFIEMNTRIQVEHPVTEMITGIDLVNEQIRVAAGAPLSVTQDEVKVEGHAI
                     ECRVNAEHPTTFRPSPGLITYFHPPGGLGVRVDSAVYQGYRIPPYYDSLVGKLIVHGR
                     TRNECLMRLRRALDEFVVDGIDTTLPLFRTLVRNPDMQNGLYDIHWLEGFLKTGGLEE
                     A"
     gene            complement(2457..2933)
                     /gene="accB"
                     /locus_tag="VHN20_14530"
     CDS             complement(2457..2933)
                     /gene="accB"
                     /locus_tag="VHN20_14530"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012252762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HEX2727032.1"
                     /translation="MAKASSPFDPELVRELANLLANTDLSEIEVEKGDLRIRVARTIT
                     TTVAVPVAPAVPSPAVALAGPAPTLDMVPAAKAAGPHPGAVISPMVGTAYRKPAPDAK
                     PFIEIGSRVEVGDKLLLIEAMKTFNDIVAPRAGTVTAIFVEDGQPVEYGEPLLVIE"
BASE COUNT          514 a         1061 c         1111 g          520 t
ORIGIN      
        1 cgcgacgctt ctacccgacc aaccagccgg cgaacccggt gggtggcttc ttcgacagcc
       61 tgttcggcgg ccgccgctag ttctttcctt gcacaatgat cccggatccg tcccggggcc
      121 gggtctgagc atgatccggc gaagtgggca ccacttcgcc gaagaagatc atgcgactca
      181 atgaaaagcg gagcgggatc gattcaatct gaattgagcc cgctctggcc gcttacgctg
      241 gccccccgtt ccgcaaggcg cgcacgacct ccgcgccggg caccgcccgg tcgcgcggcc
      301 acgccgacca gtccgccggc gtctcgatgg cgtcgcgcag catgcgcttg tagacccggc
      361 gcggcacctc gacggcgccg aactggacga ggtggtcggt cacgaactgc gtgtcgagga
      421 gcgtgaagcc gccgcgtcgg aggcgcgcca cgaggtgggc gagcgccacc ttggatgcgt
      481 cgcgcgcacg gtgaaacatg ctctcgccga aaaacgccgc tccgaggctg accccgtaga
      541 ggccgcccac aagccgttcg tcctcgtaga cctcgaccgt gtggcaatag ccgagatcgt
      601 acaactcgcc gtagaggcgg cggatgcgcg cgttgatcca ggtcttgtcg cggtcgtggc
      661 ccggctcggc gcagccggag atcaccgcgt cgaagtcatg atcgacgcgg acctcgaagg
      721 tgtctgcccg caacgtgcgc gccagacgtt tgggcaggtg aaaggcgtcg agaggaatca
      781 cgccgcgctc ctgcggctcg acccagaaca ggctcggatc gtccgcgtcc tcggccatcg
      841 ggaagatgcc ggcggcatac gccttcagca ggatgtcggg ggtgatctcg agtcgtccgc
      901 cgccgtgcat cgcggtccgt ccactccgtc gtctgtgccc ttctcaggac gtcctctgcc
      961 gcgctaagcg acagggcagg ggcgagagga aggcgcggtt ccggtgcgcc cctgacccgg
     1021 tccgccaacc ggaggcgtcc ccgggcccgg taatataacg cgccggccgg aaatatccga
     1081 cgggagatta cgcctcctcg agaccgccgg tcttcaggaa gccctcgagc cagtggatat
     1141 cgtagagccc gttctgcatg tcggggtttc gcacgagggt gcggaacagg gggagggtgg
     1201 tgtcgatgcc gtcgaccacg aactcgtcga gcgcacggcg gaggcgcatc aggcactcgt
     1261 tgcgggtgcg cccatgcacg atcagcttgc cgacgaggga gtcgtaatag ggggggatgc
     1321 ggtagccctg gtagaccgcg gaatcgacgc ggaccccgag cccgccgggc ggatgaaaat
     1381 acgtgatcag gcccggcgaa ggacggaagg tcgtcgggtg ctccgcattg acgcggcatt
     1441 cgatggcgtg cccctcgacc ttcacctcgt cctgcgtgac cgagagcggc gcgccggcag
     1501 caacccggat ctgctcgttg accaggtcga tgccggtgat catctcggtg accgggtgct
     1561 cgacctggat gcgcgtgttc atctcgatga aatagaactc gccattctcg tagaggaact
     1621 cgacggtccc ggcgccggca tagccgagct gctgcatcgc ggtggcgacg gtcccgccga
     1681 tgcgctcgcg ctcggcggcg ttcagggcag gggaggggcc ttcctcccag accttctggt
     1741 ggcggcgctg cagcgagcag tcgcgctcgc cgagatggat cgcgtgaccc tgcccgtcgc
     1801 cgagcacctg gatttcgata tggcgcggct tctcgagata tttctcgatg tagaccgcat
     1861 cgtcgccgaa cgccgccagc gcttccgtgc gcgccgtggc gagcgcgtgg gcgagatcct
     1921 cctcgctgcg cgccaccttc atgccgcgtc cgccgccgcc ggcggcggcc ttgatcagca
     1981 cgggatagcc gatgtcggct gcgacgcgtt tcgcctcgcc ctcgtcggcg acgccgcctt
     2041 ccgagcccgg cacgcaggga atgccgagcc gcttcgcggt gcgcttggcc tcgatcttgt
     2101 cgcccatgat gcggatatgc tccgccttgg ggccgatgaa cgtgatgtga tgccccgcca
     2161 ggacctcggc gaagcgggcg ttctcggaca gaaagccgta gccgggatgg actgcatccg
     2221 cgccggtgat ctcgcaggcg gcgatcagcg ccggaatgtt gaggtagctg tcgcgcgcgg
     2281 tcggcgggcc gatgcagacg ctctcgtcgg cgaggcgcac gtgcatggcg tcggcgtcgg
     2341 cggtcgaatg cacggcgacc gtggcgatgc cgagctcctt gcaggcgcgc aggatgcgca
     2401 gcgcgatctc gccgcggttg gcaatcagga tcttatcgaa catcacggcg cgacgcctac
     2461 tcgatcacga gcagcggctc gccgtattcg accggctgcc cgtcctcgac gaagatcgca
     2521 gtcaccgtgc cggcgcgcgg agcgacgatg tcgttgaacg tcttcatcgc ctcgatcagc
     2581 agcagcttgt cgccgacctc gacccgcgac ccgatctcga tgaagggctt ggcgtccggc
     2641 gccggcttgc ggtaggcggt gccgaccatc ggagagatga cagcccccgg atgcgggccg
     2701 gccgccttcg ccgccggaac catgtccaat gtcggggcgg gccccgcgag ggcaacggcg
     2761 ggagacggga cggcgggggc aaccggcacg gcgaccgtcg tggtgattgt gcgcgcgacg
     2821 cggatgcgca gatcgccctt ctcgacctcg atttcgctga gatcggtgtt ggcaagcagg
     2881 ttcgccagct cgcgcacaag ctcgggatcg aaggggctgc ttgccttggc catcagtgag
     2941 gttccttgaa aggaccagat tggttgtcgg cccggcgtcg tcgaaccgcc ggcgtgagcg
     3001 ccgagagcgc aggggaatcg cgccctctta gccaaaaggc cgggggagtc aaaggggagt
     3061 gcgggattct gccctcgaaa ccaagggata gccacgaccg ttgtccatgc ccgcccttgc
     3121 cgaaagcccg caagcttgac ctcgagaccg cgcagttcga cgcccgcgcg cgcaccgcgc
     3181 gtccgatccg gcacagcccg cgtcag
//
LOCUS       DATAIQ010000884         2670 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_45929, whole genome shotgun sequence.
ACCESSION   DATAIQ010000884 DATAIQ010000000
VERSION     DATAIQ010000884.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2670)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2670)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2670
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_45929"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..497
                     /locus_tag="VHN20_14535"
     CDS             <1..497
                     /locus_tag="VHN20_14535"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012320081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0050380 - undecaprenyl-diphosphatase
                     activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HEX2727033.1"
                     /translation="IKGVLFNPFLVCTTLIAGGLVLIVVDEMQFSRTQNDATRFPLSM
                     YLKIGLFQCVAMIPGVSRSGATIVGAMLMGADKRAAAEFSFFLAIPTMAGAFTYELAK
                     SYKTLSFNDSALIIVGFLTAFVAGLIVVRGLLAYVTRHGFKLFAWWRILVGTAGLAGL
                     LVYG"
     gene            501..749
                     /locus_tag="VHN20_14540"
     CDS             501..749
                     /locus_tag="VHN20_14540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012452889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727034.1"
                     /translation="MAASRDDVIGLSLALGIVVGTVVLGHVLPAKSPPAPASFDRDPS
                     CAEWTDGCVVCQRTEHGQACSTPGIACVRGEQQCVRRT"
     gene            complement(781..1596)
                     /gene="nth"
                     /locus_tag="VHN20_14545"
     CDS             complement(781..1596)
                     /gene="nth"
                     /locus_tag="VHN20_14545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013950272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HEX2727035.1"
                     /translation="MFIRKPLTTRKIAAPKAGRPEAVAARPARRPRPPKPVDQATLVE
                     IFRRFRETNPEPKGELEHVDAYTLTVAVVLSAQATDAGVNKATRELFKVADTPQKMVA
                     LGEERLRGYIKTVNFNPTKARNIIALSRKLVDEHGGVVPPARAVLESLPGVGRKSASV
                     VLNMAFGEPTIAVDTHIYRVSNRIPLVVTKTPDETQVALETIVPDEFRLHCHHWLILH
                     GRYVCKARKPECYRCLIRDLCRFEPKTPAPDPVSLAGKGRGRGRDATEPPLSD"
     gene            1617..2123
                     /locus_tag="VHN20_14550"
     CDS             1617..2123
                     /locus_tag="VHN20_14550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017487303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2244 domain-containing protein"
                     /protein_id="HEX2727036.1"
                     /translation="MDSGKLSPAPADCESPVFAAVITPHRSLGRDGFRIFMVVCCIAA
                     MAASIPFIVLGFWPVGGLFGLDVLALYAAFRINYHRARSFEEVVLTPIELLFRRVTHR
                     GEEREWRFNPLWTRLDRVDDEDYGLQKLALVSRGERLVIAGDLSPPERESLAEALGAA
                     LAQVKRGF"
     gene            2247..>2670
                     /locus_tag="VHN20_14555"
     CDS             2247..>2670
                     /locus_tag="VHN20_14555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HEX2727037.1"
                     /translation="MLDTLPPLASDSEWLPGRDDAAADYERVRRIVAFISERWREQPS
                     IEAIAAHLGLSATHVHHLFRRWCGLTPKAFLQALTLDHAKGLLADAASVLDATYEVGL
                     SGPGRLHDLFVTHEGMSPGEYKAGGAGLLMRFGFHPSPF"
BASE COUNT          373 a          921 c          903 g          473 t
ORIGIN      
        1 tcatcaaggg cgtgctgttc aacccgttcc tcgtctgcac gacgctgatc gcgggcggcc
       61 tcgtgctgat cgtcgtcgac gagatgcagt tcagccggac ccagaacgac gccacgcgct
      121 ttcccttgtc gatgtatctg aagatcggcc tgttccagtg cgtcgccatg atcccgggcg
      181 tgtcgcgctc gggcgccacc atcgtcggcg ccatgctgat gggcgccgac aagcgcgccg
      241 cggcggaatt ctcgttcttt ctcgccatcc cgaccatggc gggggccttc acctatgagc
      301 tcgccaagag ctacaagacc ctgtcgttca acgacagtgc gctcatcatc gtcggcttcc
      361 tgaccgcctt cgtcgcgggg ctgatcgtgg tgcgcggcct gctcgcctat gtcacgcgcc
      421 acggcttcaa gctgtttgcc tggtggcgca ttctcgtcgg aacggcgggc ctcgccggcc
      481 tgctcgtcta cggataagga atggcagctt cgcgcgacga cgtgatcggc ctgtccctcg
      541 ctctcggcat cgtggtcggg accgtggtgc tggggcacgt gctgccggcg aaatctcccc
      601 cggcgccggc ctcgttcgac cgcgacccga gttgcgccga atggaccgac ggctgcgtcg
      661 tctgccagcg gaccgagcac ggccaggcct gctcgacgcc gggcatcgcc tgcgtccgcg
      721 gcgagcagca atgcgtgcgg cgaacgtagg cagccgcgac caaccgccga accgccgggg
      781 tcagtccgac aggggcggct ccgtggcgtc ccgacccctg ccgcgacctt tcccggcaag
      841 cgagaccgga tctggcgcgg gcgtcttggg ctcgaagcgg cacaggtcgc ggatcaggca
      901 gcggtagcat tcgggcttgc gcgccttgca cacgtagcgg ccgtgcagga tcagccagtg
      961 gtggcagtgc agcctgaact cgtccggcac gatggtctcg agcgccacct gcgtctcgtc
     1021 cggcgttttc gtgaccacca gcggaatgcg gttcgagacc cggtagatat gcgtgtcgac
     1081 cgcgatcgtc ggctcgccga aggccatgtt gaggaccacg gaagccgatt tgcgcccgac
     1141 cccgggcagg ctctctagca cggcgcgggc cggcggcacg accccgccat gctcgtccac
     1201 gagcttgcgc gacagggcga tgatgttgcg cgccttggtg ggattgaagt tgacggtctt
     1261 gatgtagccg cgcaggcgct cctcgccgag cgccaccatc ttctgcggcg tgtcggcgac
     1321 cttgaacagc tctcgggtcg ccttgttgac gccggcgtcg gtcgcttgcg ccgacagcac
     1381 gacggccacg gtcagcgtat aggcatcgac atgctcgagc tcgcccttcg gctccggatt
     1441 ggtctcgcgg aagcggcgga agatctcgac cagggtggcc tggtcgacgg gcttcggcgg
     1501 acggggccgt cgggccggcc tggcggcgac cgcctcgggg cggccggcct tcggggcggc
     1561 gattttcctg gtcgtgagcg gcttccggat gaacatcgcc gcgttatatt cgccccatgg
     1621 acagcggcaa gctttccccg gccccggccg actgcgaaag tcccgtcttc gcggcggtga
     1681 tcacgccgca tcgctcgctc gggcgcgacg gctttcgcat cttcatggtg gtgtgctgca
     1741 tcgccgcgat ggcggcgagc atcccgttca tcgtgctcgg cttctggccg gtcggggggc
     1801 ttttcgggct cgacgtcctc gccctctatg ccgccttccg catcaactac caccgcgcca
     1861 ggtccttcga ggaggtggtc ctgacaccga tcgagctcct gttccggcgc gtgacgcatc
     1921 gcggcgagga gcgcgaatgg cgcttcaacc cgctctggac caggctcgac cgcgtcgacg
     1981 acgaggatta cgggctgcag aagctcgctc tcgtgtcacg cggcgagcgc ctcgtcatcg
     2041 ccggcgacct gtcgccgccc gagcgcgaaa gccttgccga agcgcttggc gccgccctcg
     2101 cgcaggtgaa gcggggattt tgaaggcgcg aatggccaat cgcggatggc cagcagggag
     2161 tggtgcccag gccggtccca cgcaggaatc gggtgtcgcc cggcatcggc gactcataga
     2221 gtgagccgca acaaggatag cagctcatgc tcgacacatt gccccccctc gcgtccgaca
     2281 gcgaatggct gccgggccgc gacgacgccg ccgccgatta cgagcgcgtg cgccgcatcg
     2341 tcgccttcat ctcggagcgc tggcgcgagc agccgtcgat tgaggcgatt gccgcgcatc
     2401 tcggactgtc ggcgacgcac gtgcatcatc tcttccggcg ttggtgcggc ctgacgccga
     2461 aagcgttcct gcaggcgctc acgctcgatc acgccaaggg cctcctggcg gacgctgcga
     2521 gcgtgctcga cgccacctac gaggtcggcc tgtcggggcc cggccgcctg cacgacctgt
     2581 tcgtgaccca cgagggcatg tcgccgggcg agtacaaggc gggcggcgcg gggctcctca
     2641 tgcgcttcgg cttccacccc tcgcccttcg
//
LOCUS       DATAIQ010000885         2813 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_461066, whole genome shotgun sequence.
ACCESSION   DATAIQ010000885 DATAIQ010000000
VERSION     DATAIQ010000885.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2813)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2813)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2813
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_461066"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..586)
                     /locus_tag="VHN20_14560"
     CDS             complement(<1..586)
                     /locus_tag="VHN20_14560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012331364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX2727038.1"
                     /translation="MERRTFLTGAAAAALATGITPAARGQGGQPEKTRIVLGVGGKAL
                     LYYLPLTIAERRNFFKEEGLEVEINDFGGGARSLQALVGGSVDVVTGAYEHTIRMQAK
                     GQDIRAVCELGRFPAIVIAVRKDKAGQIKSAADFKGAKIGVTAPGSSTALMAQFAMVK
                     AGLKPTDAAIIGAGAGPSAVAAMKKGEIDVISHLD"
     gene            complement(686..1477)
                     /locus_tag="VHN20_14565"
     CDS             complement(686..1477)
                     /locus_tag="VHN20_14565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX2727039.1"
                     /translation="MTRAKLIAWQVGVGLAMLALWHVLTVYPVIGEPKKIQFFFSTPL
                     DVLARVVREFTGGDIWHHLWITSLETILAFAFGAAGGILFGFLFARRELLAAVFDPYI
                     KAANALPRVVLAPIFALWFGLGIWSKVALGFTLVFFIVVFNVYQGVREVSPVVLANAR
                     MLGMNERQLLRHVYWPAALSWMFSSLHTSVGFALVGAVVGEYLGSSAGLGYKIQQAEG
                     VFDVTGVFAGMLILAVFVIVVDALVTVIENRLLAWRPGPSTSGQS"
     gene            complement(1724..2083)
                     /locus_tag="VHN20_14570"
     CDS             complement(1724..2083)
                     /locus_tag="VHN20_14570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020093282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease domain-containing protein"
                     /protein_id="HEX2727040.1"
                     /translation="MPNETPNLTPLARNLRRRQTDPERLLWSKLRDRRLGGWKFRRQM
                     PIGRYIVDFCCPDAWLIIELDGGQHTFDAAIARDTTRSRELEQCGYFVLRFWNAEVLE
                     NLEGICETILNAAQGRG"
     gene            complement(2102..>2813)
                     /locus_tag="VHN20_14575"
     CDS             complement(2102..>2813)
                     /locus_tag="VHN20_14575"
                     /EC_number="7.6.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2727041.1"
                     /translation="VAIVGPTGCGKSTLLNAAAGLLLPSAGAVGVFGAPLAGLNTRAG
                     YLFQQDALMPWKTALDNVAVALEPKRVARDEALRRAREWLQRVGLTSFADRYPHMLSG
                     GQRKRVALAQMLIRDPEILLMDEPFGPLDAQTRQIMGNLLLDLWAGDRKAVMFVTHDL
                     EEAIALADRVLVMSAGPAARMIGDFRVALPRPRDIAEVRLEPAFHRIHKEIWAQLRLE
                     VQKAYAQGEETLSPLGRG"
BASE COUNT          469 a          961 c          953 g          430 t
ORIGIN      
        1 ggtcgagatg cgagatcacg tcgatctcgc ccttcttcat ggcggcgacc gcactcggcc
       61 cggcgccggc gccgatgatg gccgcgtcgg tcggcttgag gccggctttg accatcgcga
      121 actgcgccat cagggccgtc gaggatccag gcgccgtgac gccgatcttg gcgcccttga
      181 aatccgccgc ggacttgatc tgtccggcct tgtccttgcg cacggcgatg acgatggccg
      241 ggaagcggcc gagctcgcac accgcgcgga tgtcctggcc cttggcctgc atgcggatgg
      301 tgtgctcgta ggcgccggtg acgacgtcga cggagccgcc gaccagcgcc tgcagcgagc
      361 gcgcgccgcc accgaaatcg ttgatctcga cctcgaggcc ctcttccttg aagaagttgc
      421 ggcgctcggc gatcgtcagc ggcaggtaat agagcagcgc cttgccgccg accccgagca
      481 cgatgcgggt cttctcaggc tggccgccct ggccgcgggc cgcgggcgtg atgccggtgg
      541 ccagggccgc ggcggcggcg ccggtcagaa aggtgcggcg ttccataggg ttcctccgat
      601 tgtcgtttgt caggttgggc gcaacgttag cttgtcagag tcgcattttc ttcggcgaac
      661 cgggcccact tcgccggaaa atgctttagc tctgcccgct tgtcgagggc cccgggcgcc
      721 aggcgaggag ccggttctcg atgacggtca cgagggcgtc gacgacgatc acgaacacgg
      781 ccaggatcag catgccggcg aagaccccgg tcacgtcgaa gacgccctcg gcctgctgga
      841 tcttgtagcc gagcccggcc gacgagccga gatactcgcc gacgaccgcg ccgaccaggg
      901 cgaagccgac cgacgtatgc agcgaggaga acatccagct gagcgccgcc ggccagtaga
      961 cgtgccgcag gagctggcgc tcgttcatgc cgagcatgcg cgcattggcg agcaccaccg
     1021 ggctcacctc gcgcacgccc tggtagacgt tgaagacgac gatgaagaag accagcgtga
     1081 agccgagcgc caccttcgac cagatgccga gcccgaacca cagggcgaag atcggcgcca
     1141 gcacgacgcg cggcagcgcg ttggcggcct tgatgtaggg gtcgaacacg gccgccagca
     1201 gctcgcggcg cgcgaacagg aagccgaaca ggatgccgcc cgccgcgccg aaggcgaagg
     1261 cgaggatggt ctcgagcgag gtgatccaca ggtggtgcca gatgtcgccg ccggtgaact
     1321 cgcgtacgac ccgcgccagc acgtcgagcg gcgtcgagaa gaagaactgg atcttcttcg
     1381 gctcgccgat gaccggatac accgtcagca cgtgccacaa cgccagcatg gcgagcccca
     1441 ccccgacctg ccacgcaatc agcttcgcgc gcgtcatctc aacaaccccc gtcattccgg
     1501 ggcggccgaa ggccgaaccc ggaacccacg ttcaagcgcg acctgaaccc tctccccgat
     1561 ggggagaggg tagggtgagg ggagcgcgac gctgctggat gaaacgcgtc gtgcgccgac
     1621 cacaaccgcg gtcgaggctt ccaacgcaac atctgcgctc tcaatgtagg agtgaggctc
     1681 accaccctcg tatcccctcc cccctcttcc gttcggtaga ggatcatccc ctaccctgcg
     1741 ccgcattgag gatggtctcg cagatccctt ccaggttctc gagcacctcg gcattccaga
     1801 agcgcagcac gaaataaccg cactgctcca gttcccgtga ccttgtagtg tcgcgcgcga
     1861 tggcggcgtc aaaggtgtgc tggccgccgt cgagctcgat gatcagccac gcgtccggac
     1921 agcagaaatc gacgatgtag cgcccgatcg gcatctgccg acggaacttc cagccgccga
     1981 ggcgccgatc gcgcagcttc gaccagagca ggcgttccgg gtcggtctgg cgccggcgca
     2041 ggtttctggc gagaggcgtc aggttgggcg tttcgttcgg caccgtcgcg ctcccctcac
     2101 cctaccctct ccccaatggg gagagggttt cctccccttg cgcgtaggcc ttctgcacct
     2161 cgaggcggag ctgggcccag atctccttgt ggatgcggtg gaaggcgggt tcgaggcgca
     2221 cctcggcgat gtcgcgcggg cgcggcagcg cgacgcggaa gtcgccgatc atgcgcgccg
     2281 ccgggcccgc cgacatcacc agcacgcggt cggccagggc gatggcctcc tcgaggtcgt
     2341 gggtcacgaa catcacggcc ttgcggtcgc cggcccacag gtcgagcagc aggttgccca
     2401 tgatctgccg cgtctgggcg tcgagcggcc cgaacggttc gtccatgagc aggatctcgg
     2461 ggtcgcggat cagcatctgg gcgagcgcca cgcgcttgcg ctgcccgccc gacagcatgt
     2521 gcgggtagcg gtcggcgaag cttgtcagcc cgacccgctg cagccactcc cgcgcccggc
     2581 gcagggcctc gtcgcgggcg acgcgcttcg gctcgagcgc gacggcgacg ttgtcgagcg
     2641 ccgtcttcca cggcatcagc gcgtcctgct ggaaaagata gccggctctc gtgttgaggc
     2701 cggcgagcgg cgcgccgaaa acgccgaccg cgcccgcgga cggcagcagc agtcccgcgg
     2761 cggcgttgag aagggtcgac ttgccacagc ctgtcggccc gacgatggcg acg
//
LOCUS       DATAIQ010000886         3470 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_343201, whole genome shotgun sequence.
ACCESSION   DATAIQ010000886 DATAIQ010000000
VERSION     DATAIQ010000886.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3470)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3470)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3470
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_343201"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..770)
                     /locus_tag="VHN20_14580"
     CDS             complement(<1..770)
                     /locus_tag="VHN20_14580"
                     /EC_number="2.6.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003602993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-amino-acid transaminase"
                     /protein_id="HEX2727042.1"
                     /translation="MSRTVFVNGTFVPYEDAKIPIMDRGFLFGDGIYEVSAVLAGRLV
                     DSDGHFARLDRSLREIRIGNPYGAAEWARLCEELVRRNGLAEGLVYMQVTRGVAERDF
                     AFPKDGAPTVVMFTQAKNITRSPQAETGVGVVTVPDLRWKRRDIKSVALLAQVLAKQA
                     AAEAGVAEAWMLEDGFVTEGSSSTAFIITRDKRVVTRPLSHAVLPGITRLSVMRLAAE
                     NGLVVDERLFTLEEALAASEAFLTSASMIVTPVVAIDGR"
     gene            1108..2043
                     /locus_tag="VHN20_14585"
     CDS             1108..2043
                     /locus_tag="VHN20_14585"
                     /EC_number="4.1.3.3"
                     /EC_number="4.2.1.41"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015933868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009436 - glyoxylate catabolic process
                     [Evidence IEA];
                     GO_process: GO:0071704 - organic substance metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HEX2727043.1"
                     /translation="MLDATAQGVYVIAPTPFHDDGRVDERSTDRMVDFFLESGVTGIT
                     VLGQMGEAPKLDHQEALDVASRVIRRAGSVPIVVGVSAPGFAAMRSLTHAVMAAGAAG
                     VMIAPPSTLRTDDQIVAYYRQAADAIGADVPFVIQDYPLTFSVVMSPGVIRRIVTDNP
                     SCVMLKHEDWPGLDKISALRGFEKDGSMRHISILCGNGGLFLDFEMERGADGANTGYC
                     FPDMLVDVVRLSKAGQRDAAHDLFDAHLPLIRYEQQPGVGLAVRKYVLMRRGILASEA
                     QRKPGAALGAAARAEVDYLLGRLARSDRRAGKLAA"
     gene            complement(2065..3090)
                     /locus_tag="VHN20_14590"
     CDS             complement(2065..3090)
                     /locus_tag="VHN20_14590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012752489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin-dependent carboxyltransferase family
                     protein"
                     /protein_id="HEX2727044.1"
                     /translation="MSALVVTTCGAMTSLQDFGRFGWQRHGVSNSGAMDRLALATANV
                     LVGNAPGAAGIEFMLLGGAFTLGGGSARVAVAGAPCTVTLDGNPAPHTASLTLRDGQM
                     LTIGAAQAGVFVYMAVAGGFALPAQLGSLSLHARARIGGLDGRALQPGDRLPLHRDEA
                     ARQADLMLDPVPLEPMAAIRVVLGPQDDYFSAAGRDAFLSSAYVVSPQADRMGYRLTG
                     PRVAHALGYNIVSDGIVAGSVQVPGSGEPIVMMADRQTTGGYPKIATVISSDLRVIAQ
                     RRPGAPVRFAAIDVADATRLARERARALSTLSSRARATAGKLPPNEDLLGQNLAGAAV
                     DALGRDD"
     gene            complement(3087..>3470)
                     /locus_tag="VHN20_14595"
     CDS             complement(3087..>3470)
                     /locus_tag="VHN20_14595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxyltransferase domain-containing protein"
                     /protein_id="HEX2727045.1"
                     /translation="GLTPAQLIARHAAPVYRVYMTGFLPGFAYLGGLDPSIATPRREN
                     PRSWTPEGTISIGGVQALVASIAAPSGWHLLGRTPMRNFMLDRDPVFILSPGDRVKFE
                     PIAAGRWQALDAAAAAGEIVAEALA"
BASE COUNT          552 a         1208 c         1175 g          535 t
ORIGIN      
        1 cggccgtcga tcgcgacgac cggcgtgacg atcatcgatg cactcgtcag gaacgcctcc
       61 gacgccgcga gcgcctcctc cagcgtgaac aggcgttcgt cgacgacgag gccgttctcc
      121 gcggcgagcc gcatgaccga cagccgggtg atgccgggca gcacggcatg cgaaagcggc
      181 cgcgtgacga cgcgcttgtc cctggtgatg atgaaagccg tcgacgagct gccttcggtg
      241 acgaagccgt cctccagcat ccacgcttcg gcgactccgg cttcggcggc cgcctgcttg
      301 gcgagaacct gcgccaaaag ggccacggac ttgatgtcgc ggcgcttcca gcgcaggtcg
      361 ggcaccgtga ccacgccgac gccggtctcg gcctgcgggg agcgcgtgat gttcttggct
      421 tgcgtgaaca tcacgaccgt cggtgcaccg tctttcggaa aggcgaagtc gcgctcggcg
      481 acgccgcgcg tgacctgcat gtagaccagc ccttcggcga gaccgttgcg ccgcaccagc
      541 tcttcgcaga ggcgcgccca ctcagccgca ccgtaggggt tgccaatccg gatctcgcgc
      601 agcgagcggt cgaggcgcgc gaaatgacca tcgctgtcga ccaagcgccc tgcgagcacc
      661 gcgctcactt cgtagatgcc gtcgccgaac agaaatccac ggtccatgat cgggatcttg
      721 gcgtcctcgt acggcacgaa ggtgccattg acgaacacgg tgcgcgacat gagcgatccc
      781 ttcctggtca cgtgcagccg ggcgcgacag gagcacgagg ctggccgtcc ggcaaggcac
      841 cgcgacattg atcgtgccaa cgcccttaac acgagcttcc aagcgatgtt gcgagcgtga
      901 gatccgcaat cgagcatcag gccaccggac cggaaggtcg ctgcggcggc tgcccccctc
      961 ccctctcagc cgtcccgtgg gacgcaagat aggctggtcc cttggcagcg cgacctggcg
     1021 cggcattttc ttgagcggga ctccccttcg cccgaaaatc ctctaagggt tctggccgga
     1081 ttttcgtttc cacaccggag agccgttatg ctcgatgcca ccgcccaggg cgtctatgtg
     1141 atcgccccga cgccttttca cgacgacggc cgcgtcgacg agcgatcgac cgaccgcatg
     1201 gtcgatttct tcctcgaatc gggcgtcacc ggcatcacgg tgctcggcca gatgggcgag
     1261 gcccccaagc tcgaccatca ggaagcgctc gacgtggcat cgcgcgtcat ccggcgggcc
     1321 ggctcggttc ccatcgtcgt cggggtttcg gctccgggct tcgcggcgat gcgctcgctc
     1381 acccatgcgg tcatggcggc cggcgcggca ggcgtgatga tcgccccgcc ctccaccctc
     1441 aggaccgacg accagatcgt cgcctattac cgacaggcgg ccgatgcgat cggcgccgac
     1501 gtgccgttcg tgatccagga ctacccgctg accttcagcg tcgtcatgag ccccggcgtg
     1561 atccgccgca tcgtcaccga caatccgtcc tgcgtcatgc tcaagcacga ggactggccg
     1621 ggcctcgaca agatcagcgc gttgcgcggc ttcgagaagg atggctccat gcgccacatc
     1681 tcgatcctgt gcggcaacgg cggcctgttc ctcgacttcg agatggagcg cggcgccgac
     1741 ggcgccaaca ccggctactg ttttccggac atgctggtcg acgtggtgcg cctgtcgaag
     1801 gccggccagc gcgacgcggc ccacgacctg ttcgatgcgc acctgccgct catccgctac
     1861 gagcagcagc ccggcgtcgg cctggcggtg cgcaaatacg tgctgatgcg gcgcggcatt
     1921 cttgcgtccg aagcgcagcg caagccgggc gcggcgctgg gcgcggccgc cagggcggaa
     1981 gtggattatc ttctcggccg tcttgcacgc tcggatcggc gcgccggcaa gctcgccgcc
     2041 tgaccggcag cgtcgaccta gcgctcaatc gtcccttccg agcgcgtcga cggcggcgcc
     2101 ggcgaggttt tggccgagca ggtcctcgtt cggcggcagc ttgccggcgg tcgcccgcgc
     2161 ccgcgacgac aaggtcgaga gggcacgggc gcgctcgcgc gcgaggcgcg tcgcgtcggc
     2221 gacgtcgatc gccgcaaagc gcaccggcgc tccgggcctg cgttgggcga tcacgcgcag
     2281 gtccgatgat atgacggtcg cgattttcgg atagccgccc gtcgtctgcc tgtcggccat
     2341 catgacgatc ggttcgccgg agcctggcac ctgcaccgat ccggcgacga tgccgtccga
     2401 cacgatattg tatccgagcg catgtgcgac gcgcggcccg gtcaggcgat atcccatgcg
     2461 gtccgcctgt ggcgagacga cataggccga cgacaggaac gcgtcgcgcc ctgccgcgga
     2521 gaagtaatcg tcctgaggtc cgagtacgac ccgaatcgcg gccatcggct cgaggggaac
     2581 tggatcgagc atcaagtcgg cctgtcgcgc tgcctcatcg cggtgcaacg gcaggcggtc
     2641 gcccggctgc agggcgcgac cgtcgaggcc gccgatgcgc gcgcgggcgt gcagcgagag
     2701 gctgccgagc tgcgcgggca gcgcaaagcc gccggcgacc gccatgtaga cgaacacgcc
     2761 ggcttgcgcc gctccgatcg tcagcatctg gccgtcgcgc agcgtcagcg aggcggtatg
     2821 gggcgccggg ttgccgtcga gcgtgacggt gcagggcgcg ccggccacgg ccacccgcgc
     2881 cgagccgccg cccagcgtga acgcgccgcc gagcagcatg aactcgatgc cggcggcacc
     2941 gggtgcattg ccgaccagca cgttggctgt ggcgagcgcg agccgatcca tggcgccgga
     3001 attggagacg ccgtgccgct gccagccgaa ccgaccgaaa tcctgcaggc tggtcatcgc
     3061 cccgcacgtc gtcacgacca gcgcgctcat gcgagcgcct ctgcgacaat ctctccggcc
     3121 gcagccgcgg catcgagggc ctgccatcgc ccggcggcga tgggctcgaa tttcacgcgg
     3181 tcgcccgggg agagaatgaa caccggatcg cggtcgagca tgaagttgcg catcggcgtg
     3241 cgcccgagca gatgccatcc gctcggcgcc gcaatcgagg cgacgagcgc ctgcacgcct
     3301 ccgatcgaga tggttccttc cggcgtccac gaccgtggat tttcgcggcg gggcgtggcg
     3361 atgctcgggt cgagcccgcc gagataagca aagcccggca ggaaacccgt catgtagacg
     3421 cggtagaccg gcgccgcatg gcgggcaatc agttgcgccg gcgtcaggcc
//
LOCUS       DATAIQ010000887         4687 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_46058, whole genome shotgun sequence.
ACCESSION   DATAIQ010000887 DATAIQ010000000
VERSION     DATAIQ010000887.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4687)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4687)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4687
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_46058"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1233)
                     /locus_tag="VHN20_14600"
     CDS             complement(<1..1233)
                     /locus_tag="VHN20_14600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011425132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HEX2727046.1"
                     /translation="MAGPTAAAKRRFQLLLIKPSHYDDDGYVVQWLRSAIPSNSLAVL
                     YSLAGDAAERQVLGPDVEIAITAVDECNTRVRPARIISEFRRGGSFGMVGLVGVQSNQ
                     FPRALDIARPLRAAEIPVVIGGFHVSGCLAMLPELQADLKAALDLGITLFAGELEGRF
                     DALLADVAANRAKPIYNYLDDLPGIEATPPPVLPARIVRRTAGHHTSFDAGRGCPFQC
                     SFCTIINVQGRKSRRRTPDDVEALIRMNWAQGIRHFFITDDNFARNKDWEPIFDRLIH
                     LREVEGINIRLIIQVDTLCHKLPNFIEKAARAGVTRVFIGLENINPDNLMAAKKRQNK
                     ITEYRKMLLAWKEAGVITYAGYILGFPADTPDSIRADIEIIKRELPLDVLEFFCLTPL
                     PGSEDHKTLWKKGVPMDAD"
     gene            1633..1920
                     /locus_tag="VHN20_14605"
     CDS             1633..1920
                     /locus_tag="VHN20_14605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727047.1"
                     /translation="MLERTQRIVESHREPRVCPAEVEPLMQTLLSTLADIDFEYEYER
                     RKLNCSAADRALKTMMRQRLEQRHNERRRPYVEELTRLHARLRTARDLERP"
     gene            complement(2156..2449)
                     /locus_tag="VHN20_14610"
     CDS             complement(2156..2449)
                     /locus_tag="VHN20_14610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727048.1"
                     /translation="MSKVSATEAARVAAASDVPAPGWGRALEATLSLLRDIDARYDQD
                     YAGIAQSSVTGETRTRLLQELDCRHRQQREPYVLAAADLHEKILRDTVLRVVH"
     gene            2591..3112
                     /locus_tag="VHN20_14615"
     CDS             2591..3112
                     /locus_tag="VHN20_14615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013165871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3280 domain-containing protein"
                     /protein_id="HEX2727049.1"
                     /translation="MTSLGIRLACLAACLCLATGSAGAETAAAIFDFDFTDTSLEASP
                     SSVRPDEARRLVLAADRLRELLREAGIAAVDLGPARDRIERARPLRACNGCEAEVARE
                     LGAALAVTGMVHKVSNLILTVDVMIRDARTGAVLRTGRADIRGNTDESWLRGVGYVVR
                     NRLLDPPLAAVEP"
     gene            complement(3174..3371)
                     /locus_tag="VHN20_14620"
     CDS             complement(3174..3371)
                     /locus_tag="VHN20_14620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727050.1"
                     /translation="MESDPLLARADAAIRESERLAEQVRRNLEASDRTLARLGDIFDM
                     LTGDDPRLHPPHRRRDEAIST"
     gene            complement(3393..3689)
                     /locus_tag="VHN20_14625"
     CDS             complement(3393..3689)
                     /locus_tag="VHN20_14625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727051.1"
                     /translation="MARFYFDIRLGECLIRDDGGTELVDQHEALAFALDEVEELLMTQ
                     AGSKITLPEARIDVCDDRRRLLFSVPFQEALAPRAARGVAGGRPAPELTSGPPA"
     gene            complement(3958..>4687)
                     /locus_tag="VHN20_14630"
     CDS             complement(3958..>4687)
                     /locus_tag="VHN20_14630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX2727052.1"
                     /translation="SPPWKGFTLAWFIATGAEFGKPGMPRDRAMLGSIAASFKLALPV
                     ALLAVLLGTANAFLLERARFRGKTLVAMMMLWPLVIPGVILGISILAFFSRLANGLED
                     WLQRDLDILRPGLGLIVLGQLSFILSLSTLIIAARLRRFDRALEEAAFDLGASRLRVL
                     RTVTLPYLRPALVGAGLVALLMSFENFNTTLMLVGSEPPLPVYMYGQMREGATPAVNA
                     VSVLLMLFAGGLAAVAVLGGRRAT"
BASE COUNT          794 a         1555 c         1570 g          768 t
ORIGIN      
        1 gtcggcgtcc atcgggacgc ccttcttcca caatgtcttg tggtcctccg atccgggcag
       61 cggggtcagg caaaagaatt cgagcacgtc gagcggcagc tcgcgcttga tgatctcgat
      121 gtcggcccgg atcgaatcgg gcgtgtcggc cgggaagccg aggatgtagc cggcatacgt
      181 gatcacgccc gcttccttcc aggcgagcag catcttgcgg tattcggtga tcttgttctg
      241 ccgcttcttg gcggccatca ggttgtcggg gttgatgttc tccagcccga tgaagacgcg
      301 cgtcacgccg gccctggcag ccttctcgat gaagttcggc agcttgtggc acaaggtgtc
      361 gacctggatg atgaggcgga tgttgatccc ctcgacttcg cgcaggtgga tcagacggtc
      421 gaagatcggc tcccagtcct tgttgcgggc gaagttgtcg tccgtgatga agaaatgccg
      481 gatgccctgg gcccagttca tgcggatcag cgcctcgacg tcgtccggcg tgcgccggcg
      541 cgacttgcgc ccctgcacgt tgatgatcgt gcagaacgag cattggaagg ggcagccgcg
      601 gccggcgtcg aagctcgtgt ggtggccggc ggtgcggcgc acgatccgcg ccggcagcac
      661 cggcgggggc gtcgcctcga tgcccggcag atcgtcgaga tagttgtaga tcggcttggc
      721 gcggttcgcg gcgacgtcgg cgagcagcgc gtcgaaacga ccctccagct caccggcgaa
      781 cagcgtgatg ccgagatcaa gcgccgcttt gagatcggcc tgcagctcgg gcagcatggc
      841 aagacagccg gacacgtgga agccgccgat caccacggga atttcggccg cccgcagcgg
      901 ccgggcgata tcgagggcgc gcgggaactg gttcgactgg acgccgacga gcccgaccat
      961 cccgaacgag ccgccgcggc gaaactcgct gatgatgcgc gccggcctga cgcgcgtgtt
     1021 gcattcgtcc acggcggtga tggcgatctc gacgtccggg ccgagcacct gccgctccgc
     1081 cgcgtcgccg gcgaggctgt agagcacggc cagggaattc gagggaatgg ccgaacgcag
     1141 ccattgcacc acgtagccgt cgtcgtcgta atgcgacggc ttgatcagca acagctgaaa
     1201 gcgccgtttc gcagccgcag tcggacccgc cattcgcttg ccccccgcca acgttgtttg
     1261 tcttgatttg gcggtgatct gagcgcccgg acaaggcgag aatgaggcgg agcctgccga
     1321 aaaatttcag gatttttttc ggccatgcgc gggcgttctt caccgcacgc ccccaggcag
     1381 aaccacgcgt tgggcgggac atcggatgac gaaccgatgt tcgtttccag atggaacacg
     1441 ggagtcggcc cgatcgttat gcaagccggg accgtgcgca ggccgaatgg ccgtgcaccc
     1501 aaaacaagtg cacaagggtt tcttgccagt cgactgccac cacgcccgcc cgagcgcgcg
     1561 tcacgagcct gtccggccgt aagcggctcg cagtatcgat tgcgttttct gaaacattgc
     1621 agggagacaa ccatgcttga gcgcacgcag cgcatcgtcg agtcacatcg tgagccccgc
     1681 gtttgccccg ccgaagtcga gcctctcatg cagaccctgc tgtcgacgct cgcggacatc
     1741 gatttcgagt atgaatacga acggcgcaag ctgaactgca gcgctgccga ccgagcgctc
     1801 aagacgatga tgcgccagcg cctcgagcag cggcacaacg agcggcgccg cccctacgtc
     1861 gaagagctca cccggttgca cgcgcgcctg cgcacagcgc gcgatcttga gcgaccataa
     1921 gcggcatgca tcttgccggc gaagtggcgt ccacttcgcc ggatcatccc ttgtccatag
     1981 tcgctccctg cctgcccgtt cgaagcgcct gatcttgcgc ggagacgtgc tgccatgatc
     2041 aggattgcga cggatcatgc gccagggctg gccggatcgg ggggccactt cggctcgctc
     2101 cgctgttctc aggagattgc cggcgggcgc cggcagcctc ccgaggatcg gtggctcagt
     2161 gcaccacccg caacacggta tcccgcaaaa tcttctcgtg cagatcagca gccgcgagga
     2221 catatggctc gcgctgctgg cgatggcggc aatcgagttc ctggagcagg cgcgtcctgg
     2281 tctctcccgt gaccgagctt tgcgcgatgc cggcgtagtc ctgatcgtat cgggcgtcga
     2341 tatccctgag cagcgacagc gtcgcctcca gcgcgcgtcc ccatcctggt gcgggaacgt
     2401 ctgaagccgc ggcgacccga gctgcttccg ttgccgagac cttcgacatg gcagccgtcc
     2461 tgttgattgc agggacccta gcaagcgtgg ccttaaagcg aaatcacttg cgttaaccgg
     2521 cagagggaat tgctgcttgc gagccctgaa gacagcctca tactgcgata agtttcgctg
     2581 cgaccggccc atgacgagcc tcgggatccg ccttgcctgc ctggccgcct gcctgtgcct
     2641 tgcgaccggg tcggccggcg ccgagaccgc ggccgccata ttcgacttcg atttcaccga
     2701 cacgagcctc gaagccagcc cttccagcgt ccggccggac gaagcccgcc gcctggtcct
     2761 cgcggctgac aggctgcgcg agctcctgcg cgaggccggc atcgccgcgg tggatcttgg
     2821 cccggcgcgc gaccggatcg agcgcgcaag gcccctgcgc gcatgcaacg gctgcgaggc
     2881 cgaggtcgcg cgcgagctcg gcgcggcgct ggccgtgacc ggcatggtcc acaaggtgtc
     2941 caacctgatc ctgaccgtcg acgtcatgat ccgcgacgct cgcaccggcg ccgtgctgcg
     3001 gacgggtcgt gccgacatcc gcggcaacac cgacgagtcg tggctgcgcg gcgtcggcta
     3061 cgtggtgcgc aaccgccttc tcgacccgcc gctggcggct gtggaaccgt gaagagcctt
     3121 gcgcctgccg ccagccccct gttcgcgcaa cgactccact cttcgcaggg cgatcaggtc
     3181 gaaatggcct cgtcgcggcg tctgtgaggc gggtgcaggc gcgggtcgtc gccggtcagc
     3241 atgtcgaaga tatcgccgag cctggcgagg gtccggtccg atgcctcaag gttcctcctg
     3301 acctgctcgg ccagccgctc gctttcgcgg atcgccgcgt cggcgcgggc caggagcggg
     3361 tcggattcca tgttctgcct cgtgcggcag cctcaagctg gcgggccgga cgtcaactcc
     3421 ggcgcgggcc tgcccccggc gacgcctcgc gcggctctcg gcgccagagc ttcctggaag
     3481 ggcacggaga acagaagccg ccgccgatcg tcacagacgt cgatccttgc ttcagggagc
     3541 gtgatcttcg accccgcctg ggtcatcagc agctcttcaa cctcgtcgag ggcaaaggcc
     3601 agcgcctcgt gctgatccac gagctccgta ccgccgtcgt cgcggatcag gcactcccca
     3661 agccggatgt cgaagtaaaa acgagccaac ccccacccct cgcgcgcgca tccgccaacg
     3721 cgcgagtgcc ctcggggttc cctgagcaag cgaatttatt tcgcaagggg cgttccggca
     3781 gcgattaacg caggtgaatg acgccggtca tcgcgcgggc gcgaattatt ggcggagggc
     3841 ttgcgtctct gaggttggct cctccgtcat tgcgaacggt gcgcaccggg gccccgccgc
     3901 ttccttctca gcacggcggg gcctttctat cgggcactgc cgaaggcacg aaacgcgtca
     3961 cgtcgcgcgc cgtcctccga gaacggcgac ggccgcgagc ccgccggcaa acagcatcag
     4021 cagcacgctg acggcgttga cggccggcgt cgcgccctcg cgcatctgcc cgtacatgta
     4081 gaccggcagc ggcggctccg agccgaccag catcagggtg gtgttgaagt tctcgaacga
     4141 catcagcagc gccaccagcc cggccccgac caacgccggg cgcagatacg gcagcgtcac
     4201 cgtgcgcaac acgcgcaggc gcgatgcgcc gagatcgaag gcggcctcct cgagggcgcg
     4261 gtcgaagcgg cgcagccgcg cggcgatgat cagcgtggac aggctcagga tgaacgagag
     4321 ctggccgagc acgatcaggc cgaggcccgg ccgcaagata tcgagatcgc gctgcagcca
     4381 gtcttcgagg ccgttggcga ggcgcgagaa gaaggcgagg atcgagatgc cgaggatgac
     4441 gccggggatc accaggggcc acagcatcat catggcgacc agggtcttgc cccggaaccg
     4501 ggcgcgctcg agcaagaagg cgttggcggt gccgagcaag acggcgagga gcgcaaccgg
     4561 gagcgcgagc ttgaagctcg ccgcgatgct gccgagcatg gcgcggtcgc gcggcatccc
     4621 gggcttgccg aactcggcgc cggtggcgat gaaccaggcg agggtgaagc ccttccacgg
     4681 cggcgac
//
LOCUS       DATAIQ010000888         3398 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_251645, whole genome shotgun sequence.
ACCESSION   DATAIQ010000888 DATAIQ010000000
VERSION     DATAIQ010000888.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3398)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3398)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3398
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_251645"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..304
                     /locus_tag="VHN20_14635"
     CDS             <1..304
                     /locus_tag="VHN20_14635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019904993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF2076 family protein"
                     /protein_id="HEX2727053.1"
                     /translation="PQRGGSGFLGTALMTAAGVAGGMMLGNALASAFGGQQGGHGAFG
                     GGKDGAATAGSGDYSDLSPFQDSGASGGSHLHDASYDPNEDFGGDFGGDADGGDWT"
     gene            complement(347..1111)
                     /locus_tag="VHN20_14640"
     CDS             complement(347..1111)
                     /locus_tag="VHN20_14640"
                     /EC_number="2.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015951318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0018104 - peptidoglycan-protein
                     cross-linking [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HEX2727054.1"
                     /translation="MLLFGIVTTGQTWAQALYHEPQVDAGFRSRAGRAPAGGPAGPGP
                     YGGGFIEFLMTGREPTPDMRPRRPSPFAAGTPEPAGTLYGRPGIAAVPGSPQAHDALA
                     LRRVVDPKFHRQVVVYDGAHGAGTVIIDTPRKFLYLVQDGGTALRYGIGVGRPGFTWA
                     GLKSVTMKREWPDWRPPAEMLKRRPDLPRYMAGGPENPLGARALYLGSSLYRIHGTNE
                     PWTIGQSVSSGCIRMMNEDVIDLYERTRVGTKVVVI"
     gene            1348..2097
                     /locus_tag="VHN20_14645"
     CDS             1348..2097
                     /locus_tag="VHN20_14645"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003600613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009288 - bacterial-type flagellum
                     [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0050920 - regulation of chemotaxis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein phosphatase CheZ"
                     /protein_id="HEX2727055.1"
                     /translation="MSFASKRYRIETTLRSDQRSAAGAPSVETAAASSGGPDSRLEEI
                     LATVTELKRLMDPAERLATDVIEAYRREISEVYQLRAELDAMKEAITSTKKEIASIHR
                     SDFEGKGMRRVAGELDAVVESTEKATTNILEALEEIESNANMLRAAGGSNGNSDYVGA
                     ILDRVVIMYEACNFQDLTGQRINKIVNVLKFVEDRLDKMIGVWGGLDAFKELVDQGAA
                     SPGGEDGLLNGPKLEQDEGHVAQNDIDALFD"
     gene            2376..2690
                     /gene="groES"
                     /locus_tag="VHN20_14650"
     CDS             2376..2690
                     /gene="groES"
                     /locus_tag="VHN20_14650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009489878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HEX2727056.1"
                     /translation="MKFRPLHDRVVVRRLDAEEKTKGGIIIPDTAKEKPQEGEVVAVG
                     PGARDENGKVQPLDVKAGDRVLFGKWSGTEVRIDGEDLLIMKESDIMGVIQGSSASRK
                     AA"
     gene            2732..>3398
                     /gene="groEL"
                     /locus_tag="VHN20_14655"
     CDS             2732..>3398
                     /gene="groEL"
                     /locus_tag="VHN20_14655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010682003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HEX2727057.1"
                     /translation="MAAKDVKFASDAREKMLRGVEVLADAVKVTLGPKGRNVVIEKSF
                     GAPRITKDGVTVAKEIELADKFENMGAQMVREVASKTNDLAGDGTTTATVLAAAIVKE
                     GAKSVAAGMNPMDLKRGIDIATAEVVKDIQGRAKKVKSSEEIAQVGTISANGDRSIGE
                     MIANAMQKVGNEGVITVEEAKTAETELDVVEGMQFDRGYLSPYFITNAEKMVAELDDP
                     YVLI"
BASE COUNT          629 a         1122 c         1134 g          513 t
ORIGIN      
        1 cccgcaacgg ggcggttccg ggttcctcgg caccgcgctg atgacggccg cgggcgtggc
       61 cggcggcatg atgctcggca atgccctggc gagcgccttc ggcggccagc agggcgggca
      121 cggcgctttc ggcggcggca aggacggggc cgcgaccgcg ggcagcggcg actacagcga
      181 cctcagtcct ttccaggatt ccggggcgtc cggaggcagc cacctgcatg acgcctccta
      241 cgatccgaac gaggatttcg gcggcgattt cggcggcgac gcggatggcg gcgactggac
      301 ctgacgtcca ccctctccct ctcccgacgt cgggagaggg agttcctcag atgacgacca
      361 ccttggttcc gacgcgggtg cgctcgtaga ggtcgatcac gtcctcgttc atcatgcgga
      421 tgcagccgga cgagaccgat tggccgatcg tccacggctc gttggtgccg tggatgcggt
      481 agagcgacga tccaagatac agcgcgcggg cgcccagcgg gttctccggc ccgccggcca
      541 tgtagcgcgg caggtccggc cggcgcttga gcatctctgc cggcggccgc cagtccggcc
      601 attcccgttt catcgtcacg ctcttgaggc ccgcccatgt gaagccgggg cggccgacgc
      661 cgatcccgta gcggagtgcc gtgccgccgt cttgcaccag gtagaggaac ttacggggtg
      721 tatcgatgat gaccgtgccg gccccatgcg cgccgtcata gacgacgacc tggcgatgga
      781 acttggggtc gacgacgcgc cgcagcgcca gcgcgtcgtg agcttgcggc gatccgggca
      841 cggcggcgat gcccggcctg ccgtacaagg tgccggctgg ttcgggtgtg ccggcggcga
      901 acggggaggg gcgccgcggc cgcatgtccg gcgtcggctc acgccccgtc atcaggaact
      961 cgatgaagcc gccgccgtaa gggcccggcc ctgcaggccc accggccggc gcccgccccg
     1021 cgcgcgaccg gaagccggcg tcgacctgcg gctcgtgata gagcgcctgt gcccaggtct
     1081 gccccgtggt cacgatcccg aacagcagca tgcagcctgc aaacgcgcgt cgcatcacgt
     1141 caacccactc agccggaacg ctcgactcgg acgagccggg ccgcggcctt actttggatc
     1201 gtcgtggtta ccgaccggct gatattcgtg gtgtacgaga gatgaagagc gcggcgcaga
     1261 ttcatgcggt cgaagtcacc acatttaatc tctcgcaatg aatgccgact atggtgcgga
     1321 cgctgattgt caggttccgg ttcctccatg tcctttgcca gtaagcgcta ccgcatcgaa
     1381 acgactcttc ggtccgacca gcgctccgcc gccggtgccc cgtccgtcga aaccgccgct
     1441 gcttcatcag gtggcccgga cagccggctc gaggagatcc tggcgaccgt aacagaactc
     1501 aagcgcctga tggacccggc cgagcgcctc gccacggacg tgatcgaggc ttatcgccgc
     1561 gagatcagcg aggtctatca gctgcgcgcc gagcttgacg ccatgaagga ggcgatcact
     1621 tcgaccaaga aggaaatcgc ctccatccac cgctcggatt tcgagggcaa gggcatgcgc
     1681 cgggtggccg gcgagctcga tgcggtggtc gagtcgaccg agaaggcgac gaccaacatc
     1741 ctcgaggcgc tcgaggagat cgaatccaac gccaacatgc tccgggcggc cggcgggtcg
     1801 aacggcaaca gcgattacgt gggggcgatc ctggatcggg tcgtgatcat gtatgaggcc
     1861 tgcaacttcc aggacctcac cgggcagcgc atcaacaaga tcgtcaacgt gttgaaattc
     1921 gtcgaggacc gcctcgacaa gatgatcggc gtatggggcg gcctcgacgc cttcaaggaa
     1981 ctggtcgatc agggggccgc cagccccggc ggcgaagacg gcctgctcaa cgggccgaag
     2041 ctcgagcagg acgaggggca cgtcgcccag aacgacatcg acgccctgtt cgattgatgg
     2101 caccgggccg cccgcgcgcc gcctgccccg ccccctcaaa agcgacactc cgacccctcg
     2161 ggccgccgcc ttgccggccg acggtccttg gccgtcggga ccctcttagg gatatgtcag
     2221 ggtcggcccg ggagtgccgg cgacgccgcc gcttgagcct tgactcggcc ccgcgacttt
     2281 cctatttcca cgccagcttt agcactcacc aagcttaagt gctaacagcg cgaccaaggg
     2341 tggcgggaag gccacgcaac cacaagagga agctcatgaa attccgtccg ctgcacgacc
     2401 gcgtcgtcgt tcgccgcctc gatgcggaag agaagacgaa aggcggcatc atcatcccgg
     2461 acaccgccaa ggaaaagccc caggagggcg aggtagtcgc cgtcggccca ggcgcccgcg
     2521 acgagaacgg caaggttcag ccgctcgatg tcaaggccgg tgaccgtgtg ctcttcggca
     2581 agtggtccgg caccgaagtc cgcatcgacg gcgaggatct cctgatcatg aaggaatccg
     2641 acatcatggg cgtcatccag ggctcgtccg catcgcggaa ggccgcgtaa gccccccgaa
     2701 accgaacaga aatcaacgga gtcacaggca aatggctgcc aaggacgtca aattcgcttc
     2761 cgacgcgcgc gagaagatgc tgcgcggcgt cgaggtcttg gccgatgcgg tcaaggtcac
     2821 cctcggtccc aagggccgta acgtcgtcat cgagaagtcg ttcggcgcgc cgcgcatcac
     2881 caaggacggt gtgacggtcg ccaaggagat cgagctcgcc gacaagttcg agaacatggg
     2941 cgcccagatg gtgcgcgagg tggcctcgaa gaccaacgat ctggccggcg acggcaccac
     3001 cacggcgacg gtgctcgccg cggcgatcgt caaggaaggc gccaagtcgg tggccgccgg
     3061 catgaacccc atggatctca agcgcggcat cgacattgcg accgccgagg tcgtgaagga
     3121 catccagggc cgcgccaaga aggtgaagtc gtcggaggag atcgcccagg tcggcacgat
     3181 ttcggccaac ggcgaccgct cgatcggcga gatgatcgcc aacgccatgc agaaggtcgg
     3241 caacgagggc gtcatcacgg tcgaggaggc caagaccgcc gagaccgagc tcgacgtggt
     3301 cgagggcatg cagttcgacc gcggctacct gtccccgtat ttcatcacga atgctgagaa
     3361 gatggtcgcc gagctcgacg acccctacgt cctgatcc
//
LOCUS       DATAIQ010000889         2034 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_343416, whole genome shotgun sequence.
ACCESSION   DATAIQ010000889 DATAIQ010000000
VERSION     DATAIQ010000889.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2034)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2034)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2034
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_343416"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..323
                     /locus_tag="VHN20_14660"
     CDS             <1..323
                     /locus_tag="VHN20_14660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000019167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HEX2727058.1"
                     /translation="FIGNLTRDTDVRHSENSARAVFDLAVNRVWRNAAGAKQEQTDFF
                     RIKSFGGLAENAGKYLGKGSKVFVQGRIEPTKYEKDGKTEYGFDFIAEEIEYLDTKAP
                     GGGQ"
     gene            370..1590
                     /gene="trfA"
                     /locus_tag="VHN20_14665"
     CDS             370..1590
                     /gene="trfA"
                     /locus_tag="VHN20_14665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011114072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid replication initiator TrfA"
                     /protein_id="HEX2727059.1"
                     /translation="MQNEFNEQEYRRKLIEGGLSEADATDLAARTAAARRDSGSAGGA
                     FRPAGSLFELPATAGDNEAALPPKLPTPASAAVERSERMAQESAELARTMGLPPEPRT
                     AVNKMAEQIGALAQDKRSSAMATKKRTAGGELAEKVSEAKQTALLKHTKQQIKDMQLS
                     LFDLAPWPDHMRALPNDFGRSAIFTVRNKKVPRAALQGQSIYHVNKDVEITYTGIELR
                     ADDDELVFAQVLEYAKRTALGEPVSFTFYELCQDLDWSINGRYYTRAEECLTRLQASA
                     MQFSSQRIGRLESVSLIRRFRVLDRGKRTSRCQVEIDAEIVVLFAGDHYTKFVWEKYR
                     KLSPTARRMFDYFATHKEPYPLKLETFRLMCGSDSTRPKKWREQVGEACDELRENGLV
                     ESAWVNDDLVHCKR"
     gene            complement(1703..>2034)
                     /locus_tag="VHN20_14670"
     CDS             complement(1703..>2034)
                     /locus_tag="VHN20_14670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005229638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MerR family DNA-binding protein"
                     /protein_id="HEX2727060.1"
                     /translation="PDKPYGSIRRYGEADVTRVRFVKSAQRLGFSLDEIAELLRLEDG
                     THCEEASSLAEHKLKDVREKMADLARMEAVLSELVCACHARRGNVSCPLIASLQGGAS
                     LAGSAMP"
BASE COUNT          411 a          664 c          645 g          314 t
ORIGIN      
        1 agtttatcgg taatcttacc cgcgataccg acgttcgcca tagcgaaaac agcgcccgcg
       61 ccgttttcga cctggctgtc aatcgcgtgt ggcgcaacgc agccggtgcg aagcaggagc
      121 agacggactt cttccgcatc aagtcgttcg gcggcctggc cgagaacgcg ggcaagtacc
      181 tgggcaaagg ctccaaggtg ttcgtccagg gccgcatcga gccgacgaag tacgagaagg
      241 acggcaagac cgaatacggc ttcgatttca tcgccgagga aatcgaatac ctggacacca
      301 aagcgccagg cggcggccag taaggccagg cccggccacg gccgggcagt atgctaggag
      361 ggagattaga tgcagaacga gttcaacgag caggaataca ggcgcaagct catcgagggc
      421 gggcttagcg aagccgacgc caccgacctt gccgcccgta ccgccgccgc tcgcagggac
      481 tcgggcagcg ccggcggggc cttccgcccc gccggttccc tcttcgagct gccggccacg
      541 gccggcgaca acgaggcggc tttgccgccg aagctaccga cgccggcaag tgccgccgtc
      601 gagcgatccg agcgcatggc gcaggaatcg gccgagcttg cgcgcacgat gggcctgccg
      661 cccgaaccgc gcaccgccgt gaacaagatg gccgagcaga tcggcgcgct ggcccaggac
      721 aaacggagta gtgcgatggc gaccaagaag cgaacggccg gcggtgagct ggccgagaag
      781 gtcagcgagg ccaagcagac ggccttgctc aagcacacga agcagcagat caaggacatg
      841 cagctctcgc tgttcgacct ggctccctgg ccggatcaca tgcgggcact gcccaacgac
      901 ttcgggcggt cggcgatctt caccgtccgc aacaagaagg tgccgcgcgc cgcgctgcaa
      961 ggccagtcga tctaccacgt caacaaagac gtggagatca cctacaccgg gatcgagctg
     1021 cgcgccgacg acgacgagct ggtattcgcc caggtgctgg agtacgcgaa gcgcaccgcg
     1081 ctcggagagc cggtttcctt cacgttctac gagctttgcc aggacttgga ctggtcaatc
     1141 aacggtcggt actacacaag ggccgaggaa tgcctgacgc ggctccaggc gtcggccatg
     1201 cagttctcat cccaacgcat cggccggctc gaatcggtgt cgctgatccg gcgcttccgc
     1261 gtcctggatc gcggcaagcg cacgtcgcgc tgccaggtcg agatcgacgc cgaaatcgtg
     1321 gtgctgttcg ccggcgacca ctacacgaaa ttcgtgtggg agaagtaccg caagctgtcg
     1381 cccaccgcgc ggcgcatgtt cgactacttc gccacccaca aggagccgta cccgctcaag
     1441 ctggagacgt tccggctgat gtgcggctcg gattccaccc ggccgaagaa gtggcgcgag
     1501 caggtaggcg aagcgtgcga cgagctgcgc gaaaacggcc tggtcgaaag tgcgtgggtg
     1561 aacgacgacc tggtgcattg caagcggtga tcgcccccct gccctcccct ggagccgccc
     1621 gagatcgagg cggctttttt tctcgagcat cgccacttcc ggcgaggcag gggtcgtctc
     1681 agaaaacgga aaataaagca cgctaaggca tagccgaacc tgccaagctt gctccaccct
     1741 gtagtgacgc gatcagcggg caggaaacgt tcccccttcg cgcatggcag gcgcacacca
     1801 actcagacag cacggcctcc atgcgcgcca ggtcagccat tttctcgcgc acgtccttga
     1861 gcttgtgctc ggccagactg ctggcttcct cgcaatgggt gccatcctcc agccgcagca
     1921 gctcggcgat ctcatccagg ctgaagccca gccgctgggc tgatttcacg aagcgcaccc
     1981 gcgttacatc cgcctcgcca tagcggcgga tgctgccata gggcttgtca ggct
//
LOCUS       DATAIQ010000890         1574 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_251949, whole genome shotgun sequence.
ACCESSION   DATAIQ010000890 DATAIQ010000000
VERSION     DATAIQ010000890.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1574)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1574)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1574
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_251949"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1121)
                     /locus_tag="VHN20_14675"
     CDS             complement(<1..1121)
                     /locus_tag="VHN20_14675"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015049.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBOAT family O-acyltransferase"
                     /protein_id="HEX2727061.1"
                     /translation="MLFNSVAFVFVFLPVTLALYALAGRAAGPAGARAALLAASLFFY
                     SWWDIRFLPVLITSYLINYVAGLALGATPPGAHGARLLLAGSIGVNLMMLGYFKYIAF
                     LVVTLNHAAGLTIAVPAVLLPLGISFFTFPQITYLVHVYRSGKAERDPVRYGLFVAFF
                     PQALAGPVTYAREMLPQFSHPAMGRLMAMDVAVGLAIFVIGLFKKVVLADSVAPYADL
                     VFGAAAHGARPTLIEAWLGVLAYTFQIYFDFSGYSDMAIGLARMFGIPLPLNFHSPYK
                     ATSIIEFWRRWHISLSRFLRDYLYIPLGGNRHGGARRLANLMITMVLGGLWHGAGWTF
                     VIWGALHGLYLVVNHLWRMLGARLGAPSPGWLAGPLTFAA"
     gene            complement(1129..>1574)
                     /locus_tag="VHN20_14680"
     CDS             complement(1129..>1574)
                     /locus_tag="VHN20_14680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727062.1"
                     /translation="ARIVANYRKNGVSVSLVVPPVAPTVRDLLAEGGRYRYIDELRAR
                     LHELDVPLADFHDAGAIPATDCEFVDGYHAGDITYLKMLAGMVRAWPWLAPLVDMRAV
                     ELTIATFDGNIIDQSAPERFRGLPELDFMEMGCNRRPSPGGGRAA"
BASE COUNT          330 a          493 c          540 g          211 t
ORIGIN      
        1 gccgcaaagg tgagcggccc cgcgagccag cccgggctcg gcgcgccaag ccgcgcgccg
       61 agcatccgcc acaggtggtt caccaccagg tacaagccgt gcagcgcgcc ccagatcacg
      121 aaggtccagc cggcgccatg ccagaggccg ccaagcacca tggtgatcat caggttcgcg
      181 aggcggcgtg cgccgccgtg gcggttgccg ccgagcggaa tgtaaaggta gtcgcgcagg
      241 aagcgcgaca gcgagatgtg ccagcggcgc cagaactcga tgatgctcgt ggccttgtag
      301 ggcgagtgga agttgagagg cagcgggatg ccgaacatgc gggcgaggcc gatcgccatg
      361 tcggaatagc ccgaaaagtc gaaatagatc tggaatgtat aggcgagaac gccgagccat
      421 gcttcgatca gcgtcgggcg ggcgccgtgc gcggcggcac cgaaaacaag gtcggcataa
      481 ggcgcgacgc tgtcggccag cacaaccttc ttgaacaggc caatcacgaa aatcgccagg
      541 ccgaccgcca cgtccatcgc catcaaccgc cccatcgccg ggtggctgaa ctgcggcagc
      601 atctcgcgcg cataggtgac cgggccggcg agcgcctgcg gaaagaaggc gacgaacagt
      661 ccgtagcgga ccggatcgcg ctcggccttt cccgatcggt agacgtgaac gagataagtg
      721 atctggggga aggtgaaaaa ggaaatgccg agggggagca gcacggccgg aactgcgatg
      781 gtcagtccgg cggcgtggtt caaggtgacg accaggaatg cgatgtattt gaaataccct
      841 agcatcatca ggttcacgcc gatcgagccg gcgagcagca ggcgtgcacc gtgcgctccc
      901 ggcggcgtcg cgccaagcgc caggcctgcc acgtagttga tcagatacga ggtgatcagc
      961 accggcagaa accggatgtc ccaccacgaa tagaagaaca gcgatgcggc gagcagcgcc
     1021 gcgcgcgctc cggccgggcc ggctgcgcgt cccgcgagcg cgtagagcgc cagcgtcacg
     1081 ggcaggaaca cgaaaacgaa tgcgacggaa ttgaacagca tcggccggct atgccgcgcg
     1141 accgccgccc ggcgagggac ggcggttgca gcccatctcc atgaaatcca gctcgggcag
     1201 ccccctgaag cgctcaggcg cgctctggtc gatgatgttg ccatcgaagg tggcgatcgt
     1261 gagctcgacc gcgcgcatat cgacgagcgg cgccagccag ggccatgcgc gaaccatgcc
     1321 cgccagcatc ttcaggtatg tgatgtctcc ggcgtgatac ccgtcgacga attcacaatc
     1381 agtcgcggga atcgcgccgg cgtcgtggaa atcggcgagc ggcacgtcca gctcgtgcag
     1441 ccttgcacgc agctcgtcga tgtagcggta ccgcccgccc tcggcgagca gatctcggac
     1501 cgtcggagcg acgggaggca ccacgagcga cacgctgacg ccgttcttcc ggtaattggc
     1561 gacgatgcgc gcga
//
LOCUS       DATAIQ010000891         2487 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_160026, whole genome shotgun sequence.
ACCESSION   DATAIQ010000891 DATAIQ010000000
VERSION     DATAIQ010000891.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2487)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2487)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2487
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_160026"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..914)
                     /locus_tag="VHN20_14685"
     CDS             complement(<1..914)
                     /locus_tag="VHN20_14685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015951649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX2727063.1"
                     /translation="MPAYKAPVDDVLFLLNDVFQIERYNNLPGFADATPDTVEAILTE
                     GAKFCEEVLAPLNRTGDIEGCKRHEDGRVTTPKGFKEAYEAFAQGGWIGLAMPPDYGG
                     QGLPYTLNVVINEFAIAANTALAMYPGLTMGAVAALLVHGSDEQKTTYVPKMIEGRWA
                     GTMNLTEPQCGTDLGLIKTRAVPNGDGSYAISGTKIFISAGEHDLAENIVHLVLARIE
                     GAPEGTKGISLFIVPKFLVNADGSLGEHNGVSCGSIEHKMGIHGNATCVMNYDGAKGW
                     LVGEANRGLNAMFVMMNEARLAVGVQGLA"
     gene            1240..>2487
                     /locus_tag="VHN20_14690"
     CDS             1240..>2487
                     /locus_tag="VHN20_14690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727064.1"
                     /translation="MRQYVAHPEPGRDSKHSDATQGNARRAGSRLDPRIAGTLHQASG
                     SDAHWNSPAQGSIDDDLDAVSAKLAELKRKAAHDRDLESILAAASVEQERRTRETAEK
                     TAAALDSVAQWVERTEDRLSETTRLASESQERTAVILNETLGMMTRRLEDIERKITES
                     AKPAAMDAALASVGRGDGPMAKGVYERSSRNGAPVEAARRGLEPRPSLISENIAHGAP
                     LASDRRAAASSSSDLRTAVADIRSRQAELEDAAERGRSHTHAAPANSRSQMDLLHSLR
                     DDLARLSMRIETGHAEPSGDGSATALRADINSLRDSTRDLATRDEVSAIERAIRELAD
                     QVSDGRGSDRDLASINEPFESLQAEVRRLAELVAGSVNSRAHVDVEALVHKLDSLGQS
                     GADASLLDRIARDLAEVRNSIRDA"
BASE COUNT          432 a          868 c          797 g          390 t
ORIGIN      
        1 gcgagccctt gcacaccgac cgccagccgc gcctcgttca tcatcacgaa catggcgttg
       61 aggccgcgat tggcctcgcc gacgagccag cccttggcgc cgtcgtaatt catcacgcag
      121 gtggcgttgc cgtggatgcc catcttgtgc tcgatcgagc cgcaggacac gccgttgtgc
      181 tcgccgaggc tgccgtcggc attgaccaga aatttcggga cgatgaacag cgagatgccc
      241 ttcgtgcctt ccggcgcgcc ttcgatgcgc gccagcacca ggtgcacgat gttctcggcg
      301 agatcgtgct cgccggccga gatgaagatc ttggttccgg aaatcgcgta ggatccgtcg
      361 ccgttcggaa cggcgcgggt cttgatcagc ccgagatcgg tgccgcattg cggctccgtc
      421 aggttcatgg tgccggccca gcggccctcg atcatcttcg gcacgtaggt cgtcttctgc
      481 tcatccgagc catggacgag aagggcggcg accgcgccca tggtcagacc gggatacatg
      541 gcgagcgccg tgttggcggc gatcgcgaac tcgttgatca cgacattgag ggtgtagggc
      601 aggccctggc cgccgtagtc cggcggcatg gcgaggccga tccagccgcc ctgcgcgaag
      661 gcctcataag cttccttgaa gcccttgggc gtcgtgaccc gcccgtcctc gtgacgcttg
      721 cacccttcga tatctccggt gcggttcagc ggcgccagga cctcctcgca gaacttggcg
      781 ccttcggtca ggatcgcctc gacggtgtcc ggggtggcgt cggcaaagcc cggcaggttg
      841 ttgtaacgct cgatctgaaa gacgtcgttg agcaggaaca gaacgtcgtc gacaggcgcc
      901 ttgtaggctg gcatcgcggc cccctcccca gggtattcag ggccgaaacg gagcgacgag
      961 gccccccctc accgcgccgc tccggagata gttcacatat aaactatctc gtagttgtat
     1021 taaagaaact tttcatcacg ctcgtcgccg aatcccaccg cggcactaac cggaccgggt
     1081 gttcttaacc acttgtttac cttcgcggcc acaaacccga cggtggcatg ggcgcgtggc
     1141 gtttactgat tcttcacgcc tgaacccgtg ttgcgacctg ctcgtagggg gcgagctggc
     1201 cgtcagcaac gcccctcttc atgtggcgcc ggcagcatca tgagacagta cgtcgcccat
     1261 cccgaaccag gtcgcgactc gaagcattcg gacgcgaccc agggcaacgc gcgccgggcc
     1321 ggatcgcggc tcgacccgcg tatcgcaggc acgcttcatc aggcgagcgg ctccgacgcg
     1381 cactggaatt cgccggcgca agggtcgatc gacgacgacc tcgacgcggt cagcgccaag
     1441 ctggcggaac tgaagcgcaa ggcggcgcac gaccgcgacc tcgaatccat cctcgccgcc
     1501 gcatcggtcg aacaggaacg gcgcacccgc gaaaccgcgg agaagaccgc cgccgcgctc
     1561 gactcggtgg cgcagtgggt cgagcgcacc gaagaccgtc tcagcgagac gacgcggctc
     1621 gcgtccgaaa gccaggagcg cacggcggtc atcctcaacg agacgctcgg catgatgacg
     1681 cgccgcctcg aagacatcga gcggaagatc accgaaagcg ccaagcctgc cgcgatggac
     1741 gcggccctcg caagcgtcgg ccgcggcgac ggccccatgg cgaaaggcgt ctacgagcgc
     1801 tcgtcccgga acggtgcgcc ggtcgaagcg gcgcggcgcg gcctcgagcc tcgccccagt
     1861 ctgatctccg agaacatcgc ccacggcgcg ccgcttgcgt ctgaccgccg tgcggcggcc
     1921 tcctcctcgt ccgacctcag aacggcggtc gccgatatcc gttcgcggca ggcggaactc
     1981 gaggacgcgg cggaacgcgg tcgcagccat acgcatgccg cgccggcgaa ctcgcgctcg
     2041 cagatggacc tgctccactc cctgcgcgac gacctcgccc gcctgtcgat gcggatcgaa
     2101 accggccatg ccgagccttc tggcgacggc tccgcgaccg cgctccgcgc cgacatcaac
     2161 agcctacgcg attcgacgcg cgacctcgcg acccgcgacg aggtgagcgc catcgagcgc
     2221 gccatccgcg aacttgccga ccaggtcagc gacggccgcg gcagcgaccg cgatctggcc
     2281 agcatcaacg agccgttcga aagcctgcag gccgaagtgc gccgcctcgc cgagttggtc
     2341 gccggaagcg tcaacagccg ggcccatgtc gacgtcgagg cactggtcca caagctcgat
     2401 tcgcttgggc agtccggcgc cgatgcgtcg ctgctggacc gcatcgcgcg cgacctcgcg
     2461 gaggttcgca acagcatccg ggacgcc
//
LOCUS       DATAIQ010000892         4290 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_206010, whole genome shotgun sequence.
ACCESSION   DATAIQ010000892 DATAIQ010000000
VERSION     DATAIQ010000892.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4290)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4290)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4290
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_206010"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..200
                     /locus_tag="VHN20_14695"
     CDS             <1..200
                     /locus_tag="VHN20_14695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015928889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX2727065.1"
                     /translation="AHSVTYRVIQEADHGLSKEPWQQAYTSLLVNWAAEMILGAREGG
                     AAPAAHTHVRPAPHRGPPQPA"
     gene            complement(237..1466)
                     /locus_tag="VHN20_14700"
     CDS             complement(237..1466)
                     /locus_tag="VHN20_14700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEX2727066.1"
                     /translation="MPDHFDDLETRDPAAREADLCARLPRAIAAALEAPAYRERLGGI
                     EAASIRSRDALASLPVLRKSELPALQKAAPPFGGFVAAPVAAFGRLFASPGPILEPEG
                     READPWRGARALHAAGFRRGDVVLNTFSYHLVPGGMMMDAAARALGCPVIPAGPGNTE
                     QQLEVMAAFRPAAYCGTPDFLKIVLDAAEAKGVPPSLKKALVSGAAFPRSLQDEIAGR
                     GVTAFQVYATAELGFIAYESEARDGLVVNEDLIVEIVRPGTGHPVPAGEVGEIVVTSL
                     DALHPQIRLALGDLSAIVPGISPCGRTNLRIRGWMGRADQAAKVKGMFVRPEQIADVV
                     GRHPEIGRVRLVVTREGERDSMTLMAESEMLDASLADAVAATLHVVTKLNGNVHLVAP
                     GTLPNDGKVISDERTLT"
     gene            complement(1503..2345)
                     /locus_tag="VHN20_14705"
     CDS             complement(1503..2345)
                     /locus_tag="VHN20_14705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2727067.1"
                     /translation="MTTAVQPMPAHEAAQPILNVNNIEVVYDHVILVLKGVSLSVPRR
                     GIVALLGANGAGKTTTLKAISNLLRAERGEVTKGSIAFEGECVERLSPNELVRRGCIQ
                     VLEGRHCFGHLTIEENLLTGAFTRRDGNAAIRRDLARIYDYFPRLAQRRSALAGYTSG
                     GEQQMCAIGRAMMSRPKMILLDEPSMGLAPQIVEEIFEIVRKLNETEGVSFLLAEQNT
                     HMALKYAVYGYILETGRVVMDGPAESLRQNEDVKEFYLGIAQGNRRSFRNVKSYKRRK
                     RWLS"
     gene            complement(2583..3908)
                     /locus_tag="VHN20_14710"
     CDS             complement(2583..3908)
                     /locus_tag="VHN20_14710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008190380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX2727068.1"
                     /translation="MSFRSSSFAAAAGLLFGAALAPAAAQDSIYVPLLTYRTGPFAGS
                     GIPIADGMHDYLRMLNERDGGIGGVRLTIEECETGYDTKKGVECYETVKGKSPVMVNP
                     YSTGITLQLIPKAAVDKVPVLSMAYGLSPSAEGTVFPWIFNPPVTYWDGASVFIKYVA
                     EKEGGLDKLKGKKIGLIHLDAPYGKEPIPVLEALAKDYGFQLLLYPVAAQDMQNQSSL
                     WLNIRRDRPDWLYNQGWGAMNPTAVKEAVRTGFPMSKFAGVWWAGGDDDARAGGDQAK
                     GYKTLSFHQAGPNFRVIDEIRKHVVDKGLSKYPKDKIGDNLYNRGVYNSMLIAEAVRT
                     AQQITGKKVVVGDDVRKGLEALNITDARLKELGMEGFAAPVKVSCEDHNGHHKVFVME
                     WDGSKWTKASDWMEPMKDKVRPLIEAGAKDYAEKNTGWPKRSETCARSS"
     gene            complement(3991..>4290)
                     /locus_tag="VHN20_14715"
     CDS             complement(3991..>4290)
                     /locus_tag="VHN20_14715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009467584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX2727069.1"
                     /translation="FDINQSFFILFMVIIGGLGSLIGSFVGAALIFMMPIALGTALPA
                     LLRPFGLGVGADTIEHLRFMIVGALIILFLIVEPHGLARLWQIAKQKLRVWPFPY"
BASE COUNT          679 a         1436 c         1434 g          741 t
ORIGIN      
        1 aggcgcattc ggtgacctat cgcgtgatcc aggaggccga ccacggcctc tcgaaagagc
       61 cgtggcagca ggcctacacg tcgcttctcg tcaattgggc ggccgagatg atcttgggcg
      121 cgcgcgaagg cggcgccgcg ccggcggcgc acacgcatgt gcggcccgcg ccgcacagag
      181 gcccgccaca gccggcttga tcctgctata tggctcgggt gtggccggcc ggaagctcac
      241 gtcagcgtcc gctcgtcgga aatcaccttg ccgtcattgg gcagcgtgcc tggcgcgacg
      301 agatggacgt tgccgttgag cttcgtgacc acgtgcaagg tcgcggcgac ggcgtcggcg
      361 agactcgcat cgagcatctc gctctcagcc atcagcgtca ttgaatcgcg ctcgccttcg
      421 cgcgtcacga cgagccgcac gcgcccgatc tccggatggc ggccgacgac gtcggcgatc
      481 tgctcgggcc gcacgaacat gcccttcacc ttcgcggcct ggtcggcgcg acccatccag
      541 ccgcggatgc gtagattggt gcgcccgcac ggactgatgc cgggaacgat cgcgctgaga
      601 tcgccgagcg cgaggcggat ctgcgggtga agcgcatcga gcgacgtgac gacgatctcg
      661 ccgacctcgc cggcgggaac gggatggccg gtgccggggc gcacgatctc gacgatcaga
      721 tcttcgttga cgacgagccc gtcacgcgcc tcgctttcgt aggcgatgaa gccgagctcg
      781 gccgtggcgt agacctggaa ggcggtgacg ccgcggcccg cgatctcgtc ctgcaacgat
      841 cttgggaacg cagcgccgga caccagcgcc tttttcagcg acggaggaac gcctttcgcc
      901 tccgccgcgt cgagcacgat cttcaggaaa tcgggagtgc cgcaatacgc ggcaggtcgg
      961 aaggccgcca tcacctcgag ctgctgctcg gtgttgcccg ggcccgccgg gatgaccggg
     1021 cagccgagcg cccgcgccgc ggcgtccatc atcatcccgc ccggcaccag atgataactg
     1081 aaggtgttga gcacgacgtc gccgcgccgg aatccggccg catggagcgc gcgggcgccg
     1141 cgccacgggt cggcctcgcg cccctccggc tcgaggatcg ggcccggcga tgcaaagagg
     1201 cgtccgaacg ccgccacagg cgcggcgacg aagccgccga agggcggcgc cgccttctgc
     1261 agagcgggca gctcggactt gcgcagcacc ggcaggctgg cgagcgcgtc gcggctgcgg
     1321 atcgacgccg cctcgatgcc gccgagccgc tcgcgatagg ccggcgcttc gagcgcggcg
     1381 gcgatcgccc gcggcagccg cgcgcacaga tccgcctccc gggcggcggg atcgcgcgtc
     1441 tcgagatcgt cgaagtggtc gggcatggcg gcgtcgctgc gctttcgaga tgacgggaac
     1501 gctcaggaga gccaccgctt gcggcgcttg tagctcttca cattgcggaa cgatcgccga
     1561 ttcccctggg cgatgccgag atagaactcc ttgacgtcct cgttctggcg cagcgactcg
     1621 gccgggccgt ccatgacgac acggccggtt tcgaggatat agccgtaaac cgcgtatttg
     1681 agcgccatgt gggtgttctg ctcggccagc aggaaggaga cgccttccgt ctcgttgagc
     1741 ttgcgcacga tctcgaagat ctcctcgacg atctgcggcg ccaatcccat cgacggctcg
     1801 tcgagcagga tcatcttggg ccggctcatc atggcgcggc cgatggcgca catctgctgc
     1861 tcgccgccgg acgtgtaacc cgccagcgcg ctccggcgct gcgcgaggcg cgggaaatag
     1921 tcgtagatgc gcgcgaggtc gcgccggatg gcggcgttgc cgtcgcgccg cgtgaacgcg
     1981 ccggtcagga gattctcctc gatcgtgaga tgaccgaagc aatgccggcc ttccagcacc
     2041 tggatgcagc cgcgccgcac gagctcgttt ggcgacaggc gctcgacgca ctcgccctcg
     2101 aacgcgatcg agcccttggt gacctcgccg cgctcggcgc gcagcaaatt cgagatcgcc
     2161 ttcagcgtcg tcgtcttgcc ggcgccgttg gcgccgagca gggcgacgat gccgcgccga
     2221 ggcacgctga gcgacacgcc tttgagaacg agaatgacgt ggtcgtagac gacctcgata
     2281 ttgttgacgt tgaggatcgg ctgtgccgcc tcatgcgcgg gcatgggctg aacggcggtg
     2341 gtcatggaag cacctcccct ccccttctcg tccttcctca tgctgaggtg cgaggagccc
     2401 ccgggtcccg cctccggcgg gcccgggggt aaactccgcg gcgagcctcg aggcaggcat
     2461 tgcgcccctg gagcatcctt cgaggctcag gccttcggcc ttcgcacctc aggatgaggt
     2521 tgatgcaatc ggctccgttc gtggaccccg gaagtctcgc gggatccacg gccataacga
     2581 cgctaggacg accgcgcgca ggtctcgctg cgcttcggcc agccggtgtt cttctcggca
     2641 tagtccttgg cgccggcctc gatcaggggt cgcaccttgt ccttcatcgg ctccatccag
     2701 tccgacgcct tggtccactt gctgccgtcc cattccatca cgaacacctt gtgatggccg
     2761 ttatggtcct cgcagctgac cttcacgggg gccgcgaagc cctccatgcc gagctccttg
     2821 aggcgcgcgt ccgtgatgtt gagagcctcg aggcctttgc gcacgtcgtc gccgacgacc
     2881 accttcttgc cggtgatctg ctgcgccgtg cgcacggcct cggcgatcag catcgagttg
     2941 tagacgccgc ggttgtagag attgtcgccg atcttgtcct tcgggtattt cgacaagccc
     3001 ttgtcgacca cgtgcttcct gatctcgtcg atgacgcgga agttggggcc ggcctgatgg
     3061 aagctcaggg tcttgtagcc ctttgcctga tcgccaccgg cgcgagcgtc gtcgtcgccg
     3121 ccggcccacc acacgccggc gaacttgctc atcgggaagc ccgtgcgcac cgcctccttg
     3181 acggccgtcg ggttcatggc gccccagccc tggttgtaga gccagtcagg ccggtcgcgg
     3241 cggatgttga gccacaacga gctctggttc tgcatgtcct gcgcggcgac gggatagagc
     3301 aggagctgga agccgtaatc tttcgcgagc gcctcgagga ccgggatcgg ctccttgcca
     3361 tagggcgcgt cgagatggat caggccgatc ttcttgccct tgagcttgtc gaggccgcct
     3421 tccttctcgg cgacgtattt gatgaacacc gaggcgccgt cccagtaggt caccggcgga
     3481 ttgaagatcc acgggaacac cgtgccttcc gccgacggcg acaggccgta ggccatcgac
     3541 agcacgggca ccttgtcgac cgccgccttc gggatcagct gcagcgtgat gccggtggaa
     3601 tacgggttca ccatcaccgg gctcttgccc ttgacggtct cgtagcattc gacgcctttc
     3661 ttggtgtcgt agccggtctc gcattcctcg atggtcagcc tgacgccgcc gatgccgccg
     3721 tcgcgctcgt tgagcatgcg cagatagtcg tgcatgccgt cggcgatcgg gatgcccgaa
     3781 ccggcgaacg ggccggtgcg ataggtgagg agcggcacgt agatggaatc ctgcgccgcc
     3841 gcgggcgcca gcgccgcgcc gaaaagaagc ccggccgcgg ctgcgaagct tgaactgcga
     3901 aacgacattc tcgttccctc ccgatgttgc cggccctcgc ggccggagat gctgtcggtg
     3961 tcctcgtctc cttttcgggt cccttgcgcg ctagtagggg aagggccaga cccggagctt
     4021 ctgtttcgcg atctgccaga gccgcgccag accgtgcggc tcgacgatca ggaataggat
     4081 gatcagagcg ccgacgatca tgaagcgcaa gtgctcgatg gtgtcggcgc ccacgccaag
     4141 gccgaagggc cgcagcagcg ccggcaaggc ggtgcccagg gcgatcggca tcatgaagat
     4201 cagcgccgcc ccgacgaacg atccgatcag gctgcccagc ccgccgataa tgaccatgaa
     4261 caggatgaaa aacgactggt tgatgtcgaa
//
LOCUS       DATAIQ010000893         4346 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_206749, whole genome shotgun sequence.
ACCESSION   DATAIQ010000893 DATAIQ010000000
VERSION     DATAIQ010000893.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4346)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4346)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4346
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_206749"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..396)
                     /gene="rpsD"
                     /locus_tag="VHN20_14720"
     CDS             complement(<1..396)
                     /gene="rpsD"
                     /locus_tag="VHN20_14720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018044769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HEX2727070.1"
                     /translation="MSKRVTAKHKLDRRMGPNIWGRPKSPVNRREYGPGQHGQRRKGK
                     MSDFGTQLRAKQKLKGYYANITEKQFRRYYAEAIRQKGDSGENLIGLLERRLDAVIYR
                     AKFVPTPFAARQFVNHGHVKVNGRRVNIAS"
     gene            complement(576..1466)
                     /gene="murI"
                     /locus_tag="VHN20_14725"
     CDS             complement(576..1466)
                     /gene="murI"
                     /locus_tag="VHN20_14725"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020095824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008881 - glutamate racemase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HEX2727071.1"
                     /translation="MRIDLLAGTMYALRNMVPRAPTILVFDSGLGGLTVLAEVRKARP
                     DARFVYAADDAGFPYGRLDEQTLVARVMAVMERLIAQHAPDLVVIACNTASTLVLPHL
                     RQRFPMPFVGTVPAIKPAAGLSRSKRVSVLATPGTVARDYTRGLIEAYAGDCRVTLVG
                     SRRLAALAEAELGGIPAADADIRAEIEPCFVADAEGRTDVVVLACTHYPLLLPRLERL
                     APWPVTWVDPAPAIARRVVQLLGETPSGRTARNGSLAVFTDGAAVAPGLRGALAERGL
                     ATIASEPMPLAGAGALTFQA"
     gene            complement(1623..2921)
                     /locus_tag="VHN20_14730"
     CDS             complement(1623..2921)
                     /locus_tag="VHN20_14730"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEX2727072.1"
                     /translation="MRIARRVFLAGAGAAIVSRAGAAADIDVAVIGAGAAGLAAAKSL
                     RAAGRSVVVLEARDRIGGRAHTDTTLGVPFDAGAQYIHWAERNPWKGIADELGVPLQE
                     DAAGAPPLVYADGVRVSDAERRRRRRGFERIWTALSLGAAADKSFADAVRGGPPEVVA
                     AAGGVTQFSLGEDPERVSIADYEQLWSGDDYLVPSGYGALVARYGADVPVRLGRPVSA
                     IRWDGQVVEVETSGGTLTAAAAVMTVPVGVLKAGSIRFVPELPARTRDALEGLGMGAY
                     TKIALRLDRARLGPLEGTDYFEILGDTAATSFEFWPFGDDLVVAVMGGDHGRGLCEAG
                     ERAAVDFVTERLAALVGSRVRDAVVAGRLAGWWTDPYARGSYSVARPGHVAARTVLRE
                     PVAGRIWLAGEATAAGGAMTVGGATLEGQRAAAEIARQLP"
     gene            complement(3072..4274)
                     /locus_tag="VHN20_14735"
     CDS             complement(3072..4274)
                     /locus_tag="VHN20_14735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019904593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase fold domain-containing
                     protein"
                     /protein_id="HEX2727073.1"
                     /translation="MAGRNLVRSFLPCLALGATLLLAPAAQAATPPPQPKSGPGGADY
                     VAGDVVKRAIGRTSAASFVFHAAGEAAQPRPVVVLFHAWGAANPQVYGGWIEHLARKG
                     YLVIFPRFQDVGRTRPGDATGNALALVRDAFAELESDPQARPDPSRVAFIGHTAGTGI
                     ALNLAAQAKTENLPQPKLLFVVMPGGIARDAKSRGIPLADLSQIDASTMLITMIGDRE
                     FRAADAAARRILQDASAVPANRKTFMRALSDDHGFPAISATLASPGSVKDAFDGAKIR
                     IPPDPPGDPRAQRQARQKWSPDMALSGEQSVLVSQLGANSTDSLDYWGYWKTFDMAAA
                     AAFSGKDALSLRNDANFTDMSRWSDGWPVKRLSAIDPPRADTPAPAKTAPAPTKVPVS
                     RGKPMSSR"
BASE COUNT          692 a         1488 c         1530 g          636 t
ORIGIN      
        1 gctcgcgatg ttgacgcggc gcccgttcac cttgacgtgg ccgtgattga cgaactggcg
       61 cgccgcgaac ggcgtcggca cgaacttggc gcgatagatc acggcatcga ggcggcgctc
      121 gagaaggccg atcaggttct cgccggaatc gcccttctga cggatcgctt cggcgtaata
      181 gcgccggaac tgcttctcgg tgatgttcgc gtaatagccc ttcagcttct gcttggcgcg
      241 cagctgcgtg ccgaagtcgg acatcttgcc cttgcggcgc tggccgtgct ggccgggacc
      301 atattcgcgg cggttgacgg ggcttttggg gcggccccag atattcgggc ccatgcggcg
      361 atcaagcttg tgcttcgccg tgactctctt tgacatcgcg tgtcctctgt tggttcaggt
      421 cgcttgttga ggaacgcgcc ctcctctccc tcgtcctcgg aggccaaggc catcccgagg
      481 ggcagggcga cagccttcgg atcgaaccga aggcacgggt gcgtaaaaaa gcacgcgcgg
      541 cccaaggacc gcgcgagccg ggctgactta gtctttcagg cctggaaagt caacgcgccg
      601 gcgcccgcca gcggcatcgg ctccgaggcg atcgtggcca agccgcgctc cgcaagcgcc
      661 ccgcgcaggc cgggcgcaac cgccgcccca tcggtgaaca ccgccaggga gccattccgg
      721 gcggtgcggc cggagggagt ctccccgagc agctggacca cccgccgggc gatggccggt
      781 gcggggtcta cccaggtcac cggccagggg gccaggcgct cgaggcgcgg cagcagcagc
      841 gggtaatggg tgcaggcgag gacgaccacg tccgtgcggc cctccgcgtc ggccacgaag
      901 caaggctcga tttcggcacg gatgtcggca tccgccgccg ggatgccgcc aagctcggct
      961 tcggccaagg cggctaggcg ccgcgaaccg accagggtga cccggcaatc gccggcataa
     1021 gcctcgatga ggccgcgcgt gtaatccctc gcgaccgtgc ctggggtggc tagcacgctg
     1081 acccgcttcg acctcgacaa gccggcggcc ggcttgatgg cgggcacggt tccgacgaac
     1141 ggcatcggga agcgctggcg cagatgcggc agaaccaggg tcgaggccgt gttgcaggcg
     1201 atcaccacca gatcgggggc atgctgcgcg atcagccgct ccataacggc catgacccgg
     1261 gcgaccagcg tctgctcgtc caggcggcca tagggaaagc cggcatcgtc ggcggcatag
     1321 acgaaccgcg cgtccggacg cgccttgcgg acctcggcca gcaccgtgag cccgccgagg
     1381 ccggaatcga acacgaggat ggtgggggcg cgcggcacca tgttgcgaag ggcgtacatg
     1441 gttccggcga gaaggtcgat acgcatggaa agatcggccg cgatcccgct cgggcatgat
     1501 ccggcgactt cggcacactt tgccgaagaa gatcatgcaa ttgcaaagag atgtagagcg
     1561 ggaccgatta atctgaagtg atcccgccgc agaaggccat ggccagggtt aacaagccct
     1621 tatcaaggca gctgccgggc aatctccgcg gccgctcgtt gcccctcgag ggtggcgccc
     1681 ccgaccgtca tggcgcctcc ggcagccgtc gcctctccgg ccagccagat gcgcccggcc
     1741 acgggctcgc gcaggaccgt ccgggcggcg acgtggccgg ggcgggcgac cgaatagctg
     1801 ccgcgggcat aagggtcggt ccaccagccg gcgagccgtc ccgccacgac agcatcgcgc
     1861 acgcggctgc cgacgagcgc cgcgagacgt tcggtcacga agtcgaccgc cgcccgctcg
     1921 cctgcctcgc acaggccgcg gccgtggtcg ccgcccatca ccgcgacgac gaggtcgtcg
     1981 ccgaacggcc agaactcgaa gctggtcgcg gccgtgtcgc cgaggatctc gaaataatcg
     2041 gtgccttcca gcgggcccag tcgtgcgcgg tcgagccgaa gggcgatctt ggtataggcg
     2101 cccattccga gcccctcgag cgcatcccgc gtccgcgccg gcagttcggg cacgaagcgg
     2161 atgctgccgg ccttcaacac gccgaccgga acggtcataa ccgccgccgc ggcggtcaag
     2221 gtgccgccgg aggtctcgac ctcgacgacc tggccgtccc agcggatggc gctcaccggc
     2281 cttccgaggc gcacggggac atcggcgccg tagcgggcaa cgagcgctcc gtagccgctg
     2341 gggacgagat agtcgtcgcc gctccacaat tgctcataat cggcgatcga tacgcgctcg
     2401 ggatcctcgc cgagcgagaa ctgcgtgacg ccgccggcgg ctgccaccac ttccggcggc
     2461 ccgccgcgaa cggcgtcggc gaacgacttg tcggccgcgg cgccgagcga cagcgccgtc
     2521 cagatccgct cgaagccgcg ccggcggcgg cgccgctcgg cgtcgctgac ccgcacgcca
     2581 tcggcgtaga cgagcggcgg cgcgccagcc gcatcctcct gcaaagggac gccaagctcg
     2641 tcggcgatgc ctttccacgg attgcgttcg gcccaatgga tgtattgcgc cccggcgtcg
     2701 aacggcacgc caagcgtggt gtcggtgtgg gcccggccgc cgatgcggtc ccgcgcctcg
     2761 agcacgacga cgctgcggcc ggctgcgcgc agggacttcg cggcggcaag gcccgcggcg
     2821 ccggctccga tgacggcgac atcgatgtcg gccgcggcgc cggcgcgcga gacgatcgca
     2881 gcacctgcgc cggcgagaaa gacgcgccta gcgatccgca tgcgaaatcc gtggctcgcg
     2941 ggcgctccgg acgcccatcg cgcgctgccc tggaagggct ttcgcgccca cctaacgcgg
     3001 aagtgagcag tgggttgcgg acctggcgac ggatcgcttc agatcaatcg gccctgctcc
     3061 ctgccttcga gtcagcggga gctcatcggc ttgccgcgag agactggcac cttggtcgga
     3121 gccggagctg tcttggcggg cgcaggcgta tcggcgcgcg gcggatcgat ggcgctgagc
     3181 cgcttgaccg gccatccgtc gctccaccgg ctcatgtcgg tgaagttcgc gtcgttgcgc
     3241 agtgaaagcg catccttccc cgaaaacgcg gccgcggcgg ccatgtcgaa ggtcttccaa
     3301 tacccccagt aatcgaggct gtcggtgctg ttggcgccaa gctgcgagac cagcacgctc
     3361 tgctcgccgc tgagggccat gtcgggagac catttttgcc gcgcctggcg ctgggcgcgt
     3421 ggatcgccag gtggatcggg cgggatgcgg atcttggctc cgtcgaacgc gtccttcacc
     3481 gagcccggcg aggcgagcgt cgccgagatc gccgggaagc catggtcgtc ggacagcgcc
     3541 cgcatgaacg tcttacggtt ggccggcacc gcgctcgcat cctgcaggat acgccgggca
     3601 gcggcgtccg cggcgcggaa ctcgcggtcg ccgatcattg tgatcagcat cgtggacgcg
     3661 tcgatctgcg agaggtccgc gaggggaatg ccgcgcgatt tcgcatcgcg cgcgatgccg
     3721 cccggcatca ccacgaagag gagcttgggc tggggcaggt tttcggtctt ggcctgcgcc
     3781 gcgaggttga gggcaatgcc ggtgccggcg gtgtggccga tgaatgcgac acggctcgga
     3841 tcgggccgtg cctgcgggtc cgactcaagc tcggcaaagg cgtccctgac cagcgccagg
     3901 gcattcccgg tcgcatcgcc aggccgtgtc cggccgacgt cctggaagcg cgggaagatg
     3961 acgagatagc ccttgcgggc gagatgctcg atccagccgc catagacctg cggattggcc
     4021 gcgccccagg cgtggaagag gacgaccacc ggccgcggct gcgccgcctc gccggccgca
     4081 tgaaacacga agctcgccgc gctggtcctg ccgatcgccc gcttcaccac gtcgccggcc
     4141 acgtaatcgg ccccgccggg cccgcttttg ggctgcggcg gcggagtggc ggcttgcgcc
     4201 gcgggcgcca gcagcagcgt agcgcccagc gccaggcaag gcagaaagga gcgcacgaga
     4261 ttgcgaccgg ccatcaggca gcgtccaagc actggtgtgg aacccggcta ttaacgatca
     4321 cactttgcag gctttctcaa ccgccg
//
LOCUS       DATAIQ010000894         1564 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_160467, whole genome shotgun sequence.
ACCESSION   DATAIQ010000894 DATAIQ010000000
VERSION     DATAIQ010000894.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1564)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1564)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1564
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_160467"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..750
                     /locus_tag="VHN20_14740"
     CDS             <1..750
                     /locus_tag="VHN20_14740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011579384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX2727074.1"
                     /translation="DLFEQPTVRKRSDGNRQLVIDVPIESHRFLFGTDANGRDLLTRT
                     LMAGRISISIGLLATFVALVIGVAYGAVAGYVGGWTDGVMMRIVDILYGLPFIFFVIM
                     LVVFFGRNFVLMFIAVGAVEWLDMARIVRGQTLSIKRQEFVQAAEALGVSTAGVIRHH
                     VIPNTLGPVVVFATLLIPKVILLESFLSFLGLGVQEPMTSWGVLISEGAKGIQDAAYL
                     LVFPSVFLVLTLLSLNFIGDGLRDALDPRDR"
     gene            765..>1564
                     /locus_tag="VHN20_14745"
     CDS             765..>1564
                     /locus_tag="VHN20_14745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014315865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX2727075.1"
                     /translation="MSSPPVLSIRGLHVRFRTGAGMLHAVRGVDLDVAQGETVAVVGE
                     SGSGKSQTMLAVMGLLAANGTVEGSARYRGQELIGLAPAALNRFRGARIGMVFQEPMT
                     SLDPLYRIGAQLSLPLVAHGRLSRRQARSRSVELLRLVRIDDPERRLGAYPHELSGGQ
                     RQRVMIAMALANNPDLLIADEPTSALDVTTQAHLLDLLGDLQQRLGMAVVFITHDLRL
                     VTRFARRVYVMKDGQVVESGGSHDVFSRPQHPYTRRLVDVEPHRRKAPV"
BASE COUNT          222 a          522 c          509 g          311 t
ORIGIN      
        1 gacttgttcg agcagcccac cgtgcgcaag cgatcggacg gcaacaggca gctcgtgatc
       61 gatgtcccga tcgagtctca tcgcttcctg ttcggcacag acgccaatgg cagggatctg
      121 ctcacccgca ccctgatggc cgggcggatc tcgatctcca tcgggcttct cgccaccttc
      181 gtggctcttg tgatcggggt cgcttacggc gccgtcgccg gttacgtcgg cggctggacg
      241 gacggcgtca tgatgcgcat cgtcgatatc ctttacggcc tgccttttat tttcttcgtg
      301 atcatgctgg tcgtcttctt cggccggaac ttcgtgctga tgttcatcgc cgtcggagcc
      361 gtggaatggc ttgacatggc gcgcatcgtg cgcgggcaga cgctctcgat caaacgccag
      421 gaattcgtgc aagcggcgga agcgctcggc gtctcgaccg ccggcgtgat caggcatcac
      481 gtcatcccga acaccctcgg tccggtcgtg gtgttcgcga ccctgctgat cccgaaggtg
      541 atccttctcg agagcttctt gtccttcctc ggtctcggcg tgcaggagcc gatgaccagt
      601 tggggcgtcc tgatctccga aggcgccaag gggattcagg atgcggccta cctgctggtc
      661 ttcccctccg tgttcctggt gctcacgctg ctgtccctga acttcattgg cgacggcttg
      721 cgcgacgcgc tcgatccgcg cgatcgctga tccggggccc gcctgtgtcg tcgccgcccg
      781 tcctgtcgat ccgtggcctg catgtccgct ttcgcacggg agccgggatg ctgcacgccg
      841 tcaggggcgt cgacctcgac gtcgcacagg gggaaacggt ggccgtggtc ggcgagtcgg
      901 gctcgggcaa gagccagacg atgctggccg tcatggggct gctcgcggcg aatggcaccg
      961 tcgaaggctc agcccgatat cgaggtcaag agctcatcgg tctggcgccg gcggcgctca
     1021 accgctttcg cggcgcccgg atcggcatgg tgttccagga gccgatgacg tctctcgacc
     1081 cgctgtacag gatcggcgcc cagctgagcc tgccgctcgt agcgcatggc aggctcagcc
     1141 gccgtcaggc gcgcagccgt tccgtcgagc ttttgcgctt ggtgcgcatc gatgacccgg
     1201 agcgacggct tggcgcctat ccgcacgagt tgtccggcgg ccagcgtcag cgtgtgatga
     1261 tcgcgatggc gctggccaac aatccggatc tcctgatcgc ggacgagccg accagcgcgc
     1321 tcgacgtgac gacccaggcc cacctgctcg atctgctcgg cgatctgcag cagcgcctcg
     1381 ggatggccgt cgtcttcatc acgcacgatc tgcgtctcgt gacgcgcttc gcgcgccgcg
     1441 tctacgtcat gaaggacgga caggtcgtgg agagcggcgg cagccacgac gtcttctccc
     1501 ggccccagca tccgtatacg cgccggctcg tcgacgtcga gccgcaccgc cgcaaggcgc
     1561 cggt
//
LOCUS       DATAIQ010000895         1678 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_344918, whole genome shotgun sequence.
ACCESSION   DATAIQ010000895 DATAIQ010000000
VERSION     DATAIQ010000895.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1678)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1678)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1678
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_344918"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..192)
                     /locus_tag="VHN20_14750"
     CDS             complement(<1..192)
                     /locus_tag="VHN20_14750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727076.1"
                     /translation="MLLSRHTKRRQFITLVGGAAATWPLVAGAQQLERMRHIGVLTGD
                     AEDDPGVKARVAASAGDPEA"
     gene            360..1328
                     /locus_tag="VHN20_14755"
     CDS             360..1328
                     /locus_tag="VHN20_14755"
                     /inference="COORDINATES: protein motif:HMM:NF033542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HEX2727077.1"
                     /translation="MAMLSFAGIDVSKDRLDVMVLPEEQCSSVSNDPTGWAKLVEQLR
                     GSSIAAIGLEASGGYERGVMRSLLAAGMSVRQVNPFKLRQFAKASGVLAKNDPLDARM
                     IASFVAIMPTRPAQPRAPALERLVEMLAVRRQLSAEKVAAENASRLLENAMLQRLSRR
                     RIARLAADIDMLDERLVEIVVADAALAHRYRLLTSMPGVGLVLACTLIALLPELGRMS
                     RKQVAALVGVAPYAFESGKLKGKRCVWGGRAPIRHVLFMAAMSASNWNPLLKRFHDRL
                     AATGKLPKVVIVAVMRKMITTLNAMVRDDVVWADRHRGQHSVPTAQ"
     gene            complement(1451..>1678)
                     /locus_tag="VHN20_14760"
     CDS             complement(1451..>1678)
                     /locus_tag="VHN20_14760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014498253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate binding protein"
                     /protein_id="HEX2727078.1"
                     /translation="EYMEAGLLASYGINRRENYRRGAGYVDRILKGAKPGDLPVEFPT
                     KIELIINLKTAKALGLDLPPSLITRADEVIE"
BASE COUNT          283 a          549 c          533 g          313 t
ORIGIN      
        1 cgcctcgggg tcgccagcgc tcgccgcaac gcgtgccttc actcccgggt catcctcggc
       61 gtcgcccgtg agcacgccga tgtgccgcat ccgctccagc tgctgcgcgc ccgccacgag
      121 cggccacgtc gccgccgcgc cgcccaccag cgtgatgaac tggcggcgct ttgtatgacg
      181 ggagaggagc attgtgaggg gtaacggggg ccgggtcatg accgaacccc cgtcgcgacc
      241 ggaagcccgc agccgcttcg gacccgagtc cgcgaatgag cttggagctc cggtcgcttc
      301 ttccacaccc gaacagttgc ttgggcacga gcccgcatca gcaaggaagg gatacgaaga
      361 tggcaatgct ctctttcgcc ggcatcgatg tgtcgaagga tcgtttggac gttatggtat
      421 tgcccgagga gcaatgctct tcggtcagca acgatcccac cggctgggcc aaactggtcg
      481 agcagctgcg cggctcctcg atcgcggcga tcggacttga ggctagcgga ggctacgagc
      541 gtggtgtcat gcgctcgttg ctcgcagccg gcatgtccgt gcgccaggtc aatccgttca
      601 agctgcggca gttcgccaag gcgagcgggg ttctggcgaa gaacgatccg ctcgatgccc
      661 gcatgatcgc gtcgttcgtc gccatcatgc ccactcgccc ggcgcaacca cgcgccccgg
      721 cgctcgaacg gctcgtcgag atgcttgccg ttcgccgcca gctcagcgcc gagaaagtcg
      781 ccgccgagaa tgcctccaga ctgctcgaaa atgccatgct gcagcggctt tctcgtcgcc
      841 gcatcgctcg cctcgcagcc gatatcgaca tgctcgatga gcgcctggtc gagatcgtcg
      901 tggccgatgc ggcgctcgcg caccgatacc gactgctcac ctccatgccg ggcgtcggac
      961 tggtgctggc ctgtaccttg attgcgctct tgcccgaact cggccgtatg agtcgcaagc
     1021 aggtcgctgc gctggtaggc gttgcgcctt atgccttcga gagtggcaag ctcaagggaa
     1081 agcgttgcgt gtggggcggt cgcgcgccaa tccgccacgt gctcttcatg gcggcgatga
     1141 gcgccagcaa ttggaatcct ctgctcaaga ggttccacga tcgtctcgct gccaccggca
     1201 aattgcctaa ggtcgtcatc gtggcagtga tgcgcaagat gatcaccacg ctcaacgcaa
     1261 tggttcgtga cgacgtcgtt tgggccgatc gtcaccgcgg tcagcacagc gtgccgaccg
     1321 cacagtagcc accgcgctga tccatttggt cgagtcaagg ccgtagccgc gcgctgcgcg
     1381 ggggcgtgaa gcgccagcct tgacgcggcc aaatcgatca gcgatctcgc tgcgacaaga
     1441 tgacagttgc tcattcgatc acctcgtcgg cgcgggtgat cagcgacggc ggcaggtcga
     1501 ggccgagcgc cttcgcggtc ttgaggttga ttatcaactc gatcttggtc gggaactcga
     1561 ccggcagatc gccgggcttg gcgcccttca gaatcctgtc gacgtagccg gcgccgcgcc
     1621 gataattctc gcgccggttg atcccgtagg atgcgagcaa gccagcctcc atatattc
//
LOCUS       DATAIQ010000896         1551 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_345041, whole genome shotgun sequence.
ACCESSION   DATAIQ010000896 DATAIQ010000000
VERSION     DATAIQ010000896.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1551)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1551)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1551
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_345041"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..488)
                     /locus_tag="VHN20_14765"
     CDS             complement(<1..488)
                     /locus_tag="VHN20_14765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727079.1"
                     /translation="MLTTLIIAIGILAVLALGYKALSGPSAGRSYKRRLELLRERHGD
                     AVTASAQAQIRKLFASRQTKVDDALSSFMPRPALLRRRLERTGKDIGLPKYVAIMGGL
                     FAVTITLLLAKGTPLLLALLVGLLVGIGIPHFSISFLIKKRIAKFNSNFPDAIELMVR
                     GLR"
     gene            complement(552..>1551)
                     /locus_tag="VHN20_14770"
     CDS             complement(552..>1551)
                     /locus_tag="VHN20_14770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727080.1"
                     /translation="ASGGVNDVRLYRDLVASGIHDYLLKPFTVDQLRDTFAHAQAILS
                     GPRGEAQADKPHVMTAVIGVRGGVGASTVATSLAWLLGEKAHRSTALLDLDVHFGTGA
                     LALDLEPGRGLTDAIENPSRIDGLFIERAMVRANERLSVLSAEAPINQPLMTDGSAFF
                     QLQEEMRNAFESTVLDLPRHMLIQYPHLVHDAHVAVVVTEMTLAATRDTIRILAWLKS
                     NAPQTKVVVVANRMPSGGALEISRKDFEQSIERPVDILFPSDPKLAAQAAKLGKPMAE
                     VASGKVAGPFTQLSNMVLSSASEEGAADATATAPGSKSLVSSLKSMLAKQPKAAAA"
BASE COUNT          257 a          484 c          549 g          261 t
ORIGIN      
        1 cggaggccgc gcaccatcag ctcgatcgca tcggggaagt tcgaattgaa cttggcgatc
       61 cgcttcttga tcaggaacga aatcgagaaa tgcgggatgc cgatgccgac cagcagcccg
      121 accagcagcg caagcagcag cggcgtgccc ttggcgagca gaagggtgat ggtgacggca
      181 aaaaggccgc ccatgatcgc gacatatttc ggcaggccga tgtccttgcc ggtccgctcg
      241 agccggcggc ggagcagtgc aggacgcggc atgaacgacg agagtgcgtc gtcgaccttg
      301 gtctgacggg aggcgaacag cttgcggatc tgcgcctggg ccgaggcggt cacggcatcg
      361 ccgtgacgct cgcgcagcag ctcgagtcgg cgcttgtagg agcgtccggc cgacgggccg
      421 ctgagcgcct tgtaaccgag cgccaggacc gccaggatgc cgatggcgat gatcagggtc
      481 gtaagcatgt cccgtcagtc caatccagct tgcgggacca gcccggtaaa gggccgtgtc
      541 ccgccatttc actaggcggc ggcagccttc ggctgcttgg caagcatcga cttgaggctg
      601 ctgaccaggc tcttcgagcc cggcgccgtc gcagttgcgt ccgccgcgcc ttcttcgctg
      661 gccgagctca gcaccatgtt cgacagctgg gtgaacggac ccgctacctt gccggaggcg
      721 acttcggcca tcggcttgcc aagcttggca gcctgtgcgg caagcttggg gtcgctcggg
      781 aacaagatgt ccaccggccg ctcgatcgac tgctcgaagt ccttcctgct gatctccaag
      841 gcgccgcccg agggcatgcg gttggcgacc accacgacct tggtctgcgg tgcgttggac
      901 ttgagccacg ccaggatccg gatggtgtcg cgggtcgcag ccagcgtcat ctcggtcacc
      961 accaccgcga catgggcgtc gtggacgagg tgcggatact ggatcagcat gtgccgcggc
     1021 aggtcgagca cggtcgattc aaacgcgttg cgcatttctt cctgaagctg gaagaaggcg
     1081 cttccgtcgg tcatcagcgg ctggttgatc ggcgcttcgg cggacagcac gctgagccgc
     1141 tcgttggcgc ggaccatggc gcgttcgatg aacaggccgt cgattcggct cggattctcg
     1201 atcgcgtcgg ttaggccgcg gcccggctcg aggtcgagcg cgagcgcgcc ggtcccgaag
     1261 tggacgtcga ggtcgagcag cgcggtcgag cggtgggcct tctcgccgag caaccaggcc
     1321 aggctggtgg cgacggtcga ggcaccgacc ccgccgcgaa cgccgatcac ggcggtcatg
     1381 acgtgcggct tgtcggcctg ggcctcgccg cgcgggccgc tgaggatcgc ctgggcatga
     1441 gcgaaggtgt cgcgcagctg gtcgaccgtg aacggcttca agagatagtc gtggatgccg
     1501 ctggcgacta gatcgcggta gaggcgcacg tcgttgaccc cgcccgaggc g
//
LOCUS       DATAIQ010000897         3559 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_207136, whole genome shotgun sequence.
ACCESSION   DATAIQ010000897 DATAIQ010000000
VERSION     DATAIQ010000897.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3559)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3559)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3559
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_207136"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..183)
                     /locus_tag="VHN20_14775"
     CDS             complement(<1..183)
                     /locus_tag="VHN20_14775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HEX2727081.1"
                     /translation="MANITGTNGPNNLIGTGARDVIRGLAGNDTLSGLSGNDTLDGGL
                     SNDVLLGGLGNDVLIGG"
     gene            complement(437..2902)
                     /locus_tag="VHN20_14780"
     CDS             complement(437..2902)
                     /locus_tag="VHN20_14780"
                     /inference="COORDINATES: protein motif:HMM:NF012573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HEX2727082.1"
                     /translation="MATINGTNAVNRLTGTSARDTIRGLAGNDTLSGLAGNDTIDGGA
                     GNDVLLGGLGNDVLLGGLGNDRLDGGAGNDRLDGGAGADLMIGGTGNDTYIVNDPGDR
                     VVETGVGLDKVFSSVSFTLGAGVEHLTLTGAAAIDGTGNNLANLIIGNAGINILRGLA
                     GNDTLRGEGGDDRFVWNAGDGNDVLEGGAGLDSVQLIGDGAAEGFAVLSNGARVRFTR
                     DIGGAVVDANDIESLVLTPGGGADAVTLNNLAGTDVFSTFVDLGAGLTGDGAADTVIL
                     NGSDGGADAITLFAITGMVTVSGAGGGTTILNPEIANDRLIISALGGNDVISGVSPIG
                     FSIASAINLTLDGGAGDDTISGGDGGDLLLGGDGDDVVDGNGGSDTAFLGSGNDRFVW
                     NIDPFLFTQDGSDVVDGQDGTDTLEITGDLNTEVFTASANGGRLLVTRDVGAFPIQTQ
                     TNADDVEVLELNAGTGADAITINDLSATDVRRITLDVGPFDGAVDAVTINASGGNDTI
                     SLTSSPGLVAIATTSGFQITIAGLEVARDTLILSGGVGNDTIDARALSGAVSRLTLDG
                     GGGSDFLLGGDGVEFIDGQGGNDVAFLGGGDDTFQWDPGDGNDVVDGQAGSDRLLFNG
                     SAAAENIEISANGSGALLTRNVANIVMELDEIETIGLNALGSADIITVNDLSATDVGQ
                     VRINLAGALGGGDGQADRIIINGTGGDDVITLTTVAGVVGITVNGVANYVTIANLETI
                     DTITFNGLGGNDTINGSGLTIAANLFINGDDGDDALTGGPGNDTFTGGGGNDTFTGGL
                     GNDTANGGPGTDVNGGGLEVFIQ"
BASE COUNT          564 a         1158 c         1192 g          645 t
ORIGIN      
        1 gccgccgatc agcacgtcgt tgccaaggcc gccgaggagc acgtcgttgc tgaggccgcc
       61 gtcgagcgtg tcgttgccgg agagaccgct cagggtatcg ttgccggcga ggccgcggat
      121 cacgtcgcgc gcgccggtgc cgatcaaatt gttgggacca ttggtgccgg tgatgttggc
      181 catggcgggt tccccggaga accagtgcgg cgatcgccgc cgctacgcca tcccatgtcc
      241 ggtgcgcgag gggttctaag cccctgcgtc gctgacgaaa tgcggggtga acgcgccgcc
      301 tacccgcttg tcatcattgt gccctcgctc ggcctccggc gcaatctcga agcagagccg
      361 cggaagagcg aggccctgct cagtcacgca catggttagc ggagaacgat cctagggaat
      421 ttgatgcgag gcttccctac tgaatgaaga cctcgagacc ccctccgttg acgtcagtgc
      481 cagggccgcc attcgcggtg tcgttgccga gtccaccggt gaaggtgtcg ttcccgccgc
      541 cgcctgtaaa ggtatcgttg ccagggccgc ccgttagcgc gtcgtcaccg tcgtccccgt
      601 tgatgaagag gtttgcggcg atcgtgagcc cggagccatt gatggtgtcg ttgccgccga
      661 ggccattgaa cgtgatcgtg tcgatggtct cgagattggc gatagtcacg taattcgcga
      721 cgccgttgac ggtgatcccg accacgccgg ccacggtcgt gagcgtgatg acgtcgtctc
      781 cacccgtgcc gttgatgatg atccggtcag cctggccgtc gccgccgccg agcgcgccgg
      841 caaggttgat cctcacctgg cccacgtcgg tcgcggagag gtcgttgacg gtaatgatgt
      901 cggcgctacc gagggcgttc aagccaatcg tctcgatctc gtccagctcc atgacgatat
      961 tggcgacatt gcgcgtcaaa agcgcccctg aaccattcgc cgagatctca atgttttcgg
     1021 cggcggcgct gccgttgaac aggagcctgt cgctgccggc ctgcccgtcg accacgtcgt
     1081 tgccgtcgcc agggtcccat tggaatgtgt cgtcaccgcc gccgaggaac gccacgtcgt
     1141 tgccgccctg accgtcgatg aactcgacgc cgtcgccacc gagaaggaaa tcggagccac
     1201 ctcccccatc caaggtcagg cgactgactg cgcccgacag agcgcgggcg tcaattgtgt
     1261 cgttaccaac gccgccgctg aggatgagcg tatccctggc gacttccaag ccggcgatgg
     1321 tgatctgaaa gccgctcgtc gtcgcgatcg ccacgagacc gggacttgat gtgagactga
     1381 tcgtgtcatt gccgccgctg gcgttgatgg tgacggcatc gaccgctcca tcgaaaggac
     1441 cgacgtcgag ggtgatccgc cggacatcgg tggccgacag atcgttgatc gtgatggcgt
     1501 cggcgcccgt tccggcgttc agctcgagga cctcgacatc gtcggcgttt gtttgcgtct
     1561 ggatcgggaa ggcgccgacg tcgcgcgtga ccaggagccg gccgccgttg gccgaggcgg
     1621 tgaagacttc cgtgttgaga tcgcccgtga tctcgagcgt gtccgtgccg tcctgcccgt
     1681 cgaccacatc gctgccgtcc tgcgtgaaaa gaaaggggtc gatattccag acgaaacgat
     1741 cgttgccgct gccgaggaac gcggtgtcgc tgccgccgtt tccgtcgacg acgtcgtccc
     1801 catcgccacc gagcagcaag tcaccgccgt cgccaccgct gatggtgtcg tcgccggcac
     1861 ctccgtcgag ggtgaggttg atggcgctgg caatgctgaa accgatgggg gagacccccg
     1921 agatgacgtc gttgccgccg agcgcgctga tgatgagccg gtcgttggcg atttccgggt
     1981 tcaggatggt cgtcccgcct ccggctccgc tgaccgtcac catcccggtg attgcgaaga
     2041 gcgtgatggc gtcggcgccg ccgtcgctgc cgttcaggat gaccgtgtcg gcagcaccgt
     2101 ccccggtcag gccggcgccg aggtcgacga aggtcgaaaa aacgtccgtg cccgccaggt
     2161 tgttgagcgt gacggcgtcg gctccgccgc ccggagtcag cacgagagac tcgatatcgt
     2221 tggcatctac gacggcgccg ccgatgtcgc gcgtgaagcg cacgcgtgcg ccgttcgaca
     2281 agactgcgaa cccctcggcc gccccgtcgc cgatgagttg gaccgagtcc aggccggcgc
     2341 cgccctcgag cacgtcgttg ccgtcgcccg cattccagac gaagcggtcg tcgccgccct
     2401 cgccccgcag cgtgtcgttg ccggcgaggc cgcgcaggat attgatcccg gcgttgccga
     2461 tgatcaggtt ggcgaggttg ttgccggtgc cgtcgatcgc cgccgcgccc gtcagggtga
     2521 ggtgctcgac gccagcgccc agggtgaagc tgaccgagct gaaaaccttg tcgagcccga
     2581 cgccggtctc gaccacccga tcgccggggt cgttgacgat gtaggtgtcg ttgcccgtgc
     2641 cgccgatcat gaggtcggcg cccgcgcctc cgtcgagacg gtcgttgccc gcgcccccgt
     2701 cgagccggtc gtttcccagg ccgccgagca gaacgtcgtt gcccagcccg ccgagcagca
     2761 cgtcgttgcc ggcgccgccg tcgatcgtgt cgttcccggc aaggccgctc agcgtgtcgt
     2821 tgccggcgag gccgcggatc gtgtcccgcg cgctcgtgcc tgtcagccgg ttgacggcat
     2881 tggtgccgtt gatggtcgcc attcggggtc ccccaagtgc cggtgcggcg atcccgccgc
     2941 cgggccatcc cgttccggcg cgcgagggtc cttagcccgt gcgtcaccgg caagatgagg
     3001 ggtgcaaatg tgcccgcccc gtccgtgatt acgattgtga ctgcgatgtt gatccgacgc
     3061 aatacccagg tgaaccatcg aaatacgagc acgtccgggt tctgcgcacg tggttagccg
     3121 cgctcatcgt gagcttagca aggcgggtga caagctgaac gcgctgccgg tcagcagact
     3181 attggctacc gccctacgcc caggacggcg ggcggtggtg gcgcatcccc gttagacttc
     3241 gcaagaccga ttccggaatc gcaacagctc accgagcctg ggtttgaaag cccagcggct
     3301 ggcgtgcccg gaatcacagg gatgggatgc cgccgaactt aatggggcgc atcacaaaaa
     3361 ccgatttgcc agcggcaaag cgcctgaggc attgtccggc ccgcatatcg ccggagggct
     3421 cgggtcaggc atgaaacagg ttgaggttgc ggtcatcggc accgggtggt gcggaggcat
     3481 cagggcggag acgctgtcgc gctcggccct ggtcgacaag ctgcacatct gcgagatccg
     3541 ccccgagcgc ctcgcgagg
//
LOCUS       DATAIQ010000898         6664 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_345098, whole genome shotgun sequence.
ACCESSION   DATAIQ010000898 DATAIQ010000000
VERSION     DATAIQ010000898.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 6664)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6664)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6664
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_345098"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..171)
                     /locus_tag="VHN20_14785"
     CDS             complement(<1..171)
                     /locus_tag="VHN20_14785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEX2727083.1"
                     /translation="MHTAMPALTALRAFEAAARHLSLTRAAAELHVTAGALSHQIRGL
                     EDFLGVQLFERRV"
     gene            297..530
                     /locus_tag="VHN20_14790"
     CDS             297..530
                     /locus_tag="VHN20_14790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727084.1"
                     /translation="MACIATHQDLAHFHPGTAAQAEKPGLLRRLTDAVAKARQNQIDR
                     KLAQYLQRSGGRLTDDIERQMMEQLFGDWNRRA"
     gene            complement(671..2041)
                     /locus_tag="VHN20_14795"
     CDS             complement(671..2041)
                     /locus_tag="VHN20_14795"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEX2727085.1"
                     /translation="MSHSSSKIVICGAGIAGVAAAYHLAVEHGFANVVLVDAGNPLSL
                     TSDKSTEAYRNWWPGPDWAMTAFMNRSIDLIEGIARATGNRINLNRRGYVFATADATR
                     IPFLGTMATTAAGHGGGAARFHDTPLSAYTPSPERGFDVALAGADVITDGSLIRRHFP
                     YLAPETVAVVHARRAGWLSSQQLGMVMLETARACDVQVVKGRIVGIDAAGGRVRAVHV
                     ECQDQRQTLAATHVVLAAGPMQAEMARMIGVDLPIRAERHYKVSFPDALGGVPRNAPM
                     LIWLDEQHLPWNDGERAALAADEEARWLLGTFPAGVHGRPDGASATIVLFNHHGDAVD
                     PIFPLPEPPPHYAEIALRGMSTMVPALKAYDGTVPRPYIDGGYYMRTRENRPLIGPVP
                     VEGAYISCAFSGFGVMASCAGGELIARHIEEAALPDYAPAFLLSRYQDAAYGALLERW
                     GDGGQL"
     gene            2291..3040
                     /locus_tag="VHN20_14800"
     CDS             2291..3040
                     /locus_tag="VHN20_14800"
                     /EC_number="1.1.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009736109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose 1-dehydrogenase"
                     /protein_id="HEX2727086.1"
                     /translation="MRLQGKSALVTGGASGFGAEIARRFAAEGASVVILDLNGAGAER
                     VAGECRTRAIGLRGDVTSRADIETAVREATKGHGRLDVVVNNAGWTHRNKPILEVTED
                     EFDRVHAINVKSIFLMTQVAVPVMAAQGGGCIINIGSTAGIRPRPGLTWYNATKGAVN
                     LVSKSMAVELAPAKIRVNCIAPVMGETGLLEAFMGLPDTPENRAKFVAPIPLGRLSRP
                     SDIASACVYLASDEAEFLTGIVLPVDGGRTV"
     gene            3106..4278
                     /locus_tag="VHN20_14805"
     CDS             3106..4278
                     /locus_tag="VHN20_14805"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011089980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX2727087.1"
                     /translation="MSAIEDGPAADYADIREEVRKLCAAFPGEYWRKLDRDQAYPAEF
                     VKALSDAGYLAALIPERYGGSGLPLSAAAAILEEVQRAGCNGAACHAQMYIMGALLRH
                     GNEEQKQRYLPKIASSELRLQAFGVTEPTSGTDTSSIKTFAEKRGDRYVVNGQKVWTS
                     RAEYSDLMLLLARTTPKDQVDKRTDGISLFILDMRQAKKKGLTIRPIRAMMNHATTEV
                     FFDNVEVPAENLIGEEGGGFRYVLSGMNAERILIAADCIGDAKWFIEKASAYASERVV
                     FGRPIGQNQGIQFPIARAYAQMRAAELMVHHAARLFESGKDCGAEANMAKLLAADASW
                     AAAEACVQTHGGYAFAEEYDVERKFRETRLYQVAPISTNLILSYLSEHVLGMPRSY"
     gene            4490..5647
                     /locus_tag="VHN20_14810"
     CDS             4490..5647
                     /locus_tag="VHN20_14810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007594283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015658 - branched-chain amino acid
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     substrate-binding protein"
                     /protein_id="HEX2727088.1"
                     /translation="MLTGKMTAVAAALLALSTAAADAKDKVKVAFIGPLTGGVAANGL
                     GGRNSAELAVRLRNADAKAKYEYELVVLDDECKPNVAVQVATKAGADRGVIAAVAHYC
                     SAAAIATIDVYHRFGLPMVVWGAVLPDITYRKKLPELHRVNGTMINQNEVAAKLVAGL
                     GYKRWVSIHDTPDYGKAHNEYFTKSVKPLGGEILGAFGVTADQQDFTAELTQAKALNP
                     QVIYFGGLTPIGIRIRSQMDRLGINAVFQGTSGIKSDAYIQGLGTLAEGSLSFIEGAP
                     IEKLPGGKFFQEQYDKAGYKEPPEAYGAFAFAAMQLVLDKIEAVGPDRVKVRDALGKV
                     ENYDSIVGPVTFDDHGQNTVPLISKYVVQDGKWVIWEDSEYASGKRKLPGQ"
     gene            5714..6634
                     /locus_tag="VHN20_14815"
     CDS             5714..6634
                     /locus_tag="VHN20_14815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018458438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015658 - branched-chain amino acid
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX2727089.1"
                     /translation="MDIALFGQFVVNGLMLGLMYGLVAVGFTLFFGVLDVIKFSHGDV
                     LTVGAFAGFATYLGLKALQISSPWLQLLIVALVAMLLMAALGAVIARWVVLPLRGAPA
                     LNTLLITLMLGTVLREAVRLFFPDGANPKPFPALLPTTAYTWGSFTLRLDSAILLAAG
                     IAMIAAVHLLINKSKLGLAIRAVAQDAETARTMGINFTFVVLTTFALGSALAAFAGVM
                     NGLYYNEINFGMGLLLGVFGFSAAVVGGLGNIYGAILGGFLFAALQTIGAVALPFASA
                     YKDVFALAVIIAIMTWRPTGLIAEKSGERV"
BASE COUNT         1166 a         2175 c         2246 g         1077 t
ORIGIN      
        1 cacccggcgc tcgaacaact gcacgccgag gaagtcctcg aggccgcgga tctggtggct
       61 gagggcgccg gcggtgacgt gcagttcggc cgcggccctg gtcaggctca ggtggcgggc
      121 tgcggcctcg aaggcgcgca aagcggtcaa tgccggcatc gcggtatgca tgagctgccc
      181 tcaagcgtcg gctgaggact aatcctttgt caaccagcgt tgctatcgtc aatatccagg
      241 tcaccgcttc ggatgtttga gaatcactca ttcgtgagcg ggttcggaga agcaccatgg
      301 cctgcatcgc aacgcatcaa gatctggccc atttccatcc cgggaccgct gctcaggccg
      361 aaaagcccgg cctgctgcgc cgcctcaccg acgccgtggc gaaagcgcgt cagaaccaga
      421 tcgatcgcaa gctggcgcaa tacctgcagc ggtcgggcgg tcgcctgacc gatgacatcg
      481 agcgccagat gatggagcag ctcttcggtg actggaaccg ccgcgcctga cgggagaccc
      541 gcgcggagag gccagcgaga ttgtcggcgg cgaggtggcg caaacgccgt attgcgacgt
      601 cgacgacact gaccgcctct cgccaatgcg accgtgatcg cgggtcagcg ccggaacgga
      661 gggcgcacgg tcaaagctga ccaccgtcgc cccatctctc aagcagggcg ccatatgcgg
      721 cgtcctgata gcgggacagc agaaaggccg gcgcatagtc gggtagcgca gcttcttcga
      781 tgtggcgtgc aatgagctcg ccgcccgcgc acgacgccat cacgccgaac cccgagaacg
      841 cgcacgagat gtatgcgcct tcgaccggaa cgggtccgat cagcggccgg ttttcccgcg
      901 tcctcatgta gtagccgccg tcgatgtaag gccgcggtac cgtcccgtcg taggccttga
      961 gcgccggcac catggtcgac atgccgcgaa gcgcgatctc ggcgtaatgc ggcggcggct
     1021 cgggcagcgg gaagatcgga tcgacggcgt cgccatggtg attgaagaga acgatcgtcg
     1081 ccgatgcccc gtcggggcgc ccatgcacgc cggccggaaa tgtcccgaga agccaccggg
     1141 cttcctcatc ggccgcgagc gcggcccgtt ccccgtcatt ccaggggaga tgctgctcgt
     1201 cgagccagat cagcatcggc gcgttgcgcg gcacgccgcc aagcgcatcg gggaaactga
     1261 ccttgtaatg gcgctcggcc cggatcggga gatcgacgcc gatcatgcgc gccatctcgg
     1321 cttgcatcgg tccggcggcg agcacgacat gcgtcgccgc gagcgtctgg cgctggtcct
     1381 gacattccac gtgaaccgca cgaacccgac cgccagcggc gtcgatgccg acgatgcggc
     1441 ctttcacaac ctgcacgtcg cacgcgcgcg ccgtttccag catcaccatc ccgagttgct
     1501 gggagctcag ccaaccggcg cggcgtgcgt gcaccaccgc aaccgtctcg ggcgcgagat
     1561 aggggaaatg ccggcggatc agggacccgt cggtgatgac gtccgcgccg gccaacgcga
     1621 catcgaaacc gcgttccggc gacggcgtat aagcgctcag cggcgtgtcg tgaaaccggg
     1681 cagcgccgcc gccatggccc gcggcggtcg tcgccatggt cccgaggaaa gggatcctgg
     1741 tcgcatcggc ggtcgcaaac acataaccgc ggcggttgag attgatgcgg ttgcccgtgg
     1801 cgcgcgcgat cccttcgatc agatcgatgc tgcggttcat gaaggcggtc atcgcccaat
     1861 cgggaccggg ccaccagttg cggtaggctt cagtcgattt atccgacgtg agcgagaggg
     1921 gatttcccgc gtcgaccaat accacgttgg caaaaccatg ttcgacggcg agatgatagg
     1981 cggctgcgac gccggcgatg ccggcgccgc agatgacaat tttcgatgat gaatgagaca
     2041 tcgcagccca tcgcacgccg ccatcgcggc acgaagatcc cgcgctcatg atatcagaac
     2101 cggcgagcgg acggctgctg cgtatccagc gaaggcaggc ccaggatctc tgttgaggat
     2161 attgttttcg gactagctgc ccggctgcgg gaattgacct atgatcgggt gatcggcgac
     2221 ggcgagcgat ttcgggagga accggcgggg ggcgtcgccg ccgtcatccg tgtttcgagg
     2281 gggattcggc atgcggttgc aaggcaagtc ggcgcttgtg acgggaggcg cgtcgggctt
     2341 cggggcggag atcgcgcggc ggtttgcggc cgaaggcgcg agcgtcgtca tcctcgacct
     2401 caacggagcc ggcgccgagc gcgtcgccgg cgaatgccgc acgcgggcga tcgggcttcg
     2461 tggcgacgtc accagccggg cggatatcga gacggccgtc cgcgaggcga cgaagggcca
     2521 tggccggctc gacgtcgtcg tcaacaacgc cggctggacg catcgcaaca agccgatcct
     2581 cgaggtcacg gaggacgagt tcgaccgcgt ccatgcgatc aacgtcaaat ccatcttcct
     2641 gatgacgcag gtcgccgtgc cggtgatggc cgcccagggc ggcggctgca tcatcaacat
     2701 cggctcgaca gccgggatac gcccgcggcc gggcctgacg tggtacaacg ccaccaaggg
     2761 cgcggttaac ctggtgtcga agtcgatggc ggtcgagctg gcgccggcaa agatccgggt
     2821 gaattgcatc gcgccggtga tgggcgagac aggcctgctc gaagccttca tgggcctgcc
     2881 tgacacgccc gaaaaccggg caaaattcgt tgcgccgatc ccgctcggcc gcttgtcgcg
     2941 gccgtccgac atcgccagcg cctgcgtgta tctcgcctcg gacgaggccg aattcctgac
     3001 cggcatcgtg ctcccggtcg acggagggcg gacggtttag cggcgcccca ggtgtggtga
     3061 tacagacagg cgctgcggaa cgatcatgct gagccaggag tcaacatgag cgcgatcgag
     3121 gatggtccgg cggcggatta cgcggacatc cgcgaggagg tgcgcaagct ctgcgccgcg
     3181 ttcccgggcg aatattggcg caagctcgat cgcgaccagg cttatccggc cgagttcgtc
     3241 aaggcgctga gcgacgccgg ctacctcgcc gcgctgatcc ccgaacgata tggcggatcg
     3301 gggctgccgc tgtcggcggc cgcggccatc ctcgaggagg ttcagcgcgc gggctgcaac
     3361 ggcgccgcct gccacgcgca gatgtacatc atgggcgccc tgcttcgcca cggcaacgag
     3421 gagcagaagc aaaggtatct gccgaagatc gcgtccagcg agctccgcct gcaggctttc
     3481 ggcgtcaccg agccgacgag cggcaccgac acgagctcga tcaagacctt cgccgagaag
     3541 cgcggcgacc gctacgtcgt caacggccag aaggtgtgga cctcgcgcgc ggaatattcg
     3601 gacctgatgc tgctgctggc gcgcaccacg ccgaaggacc aggtggacaa gcgcaccgac
     3661 ggcatctcgc tgttcatcct cgatatgcgg caggcaaaga agaagggcct gacgatacgc
     3721 ccgatccggg ccatgatgaa ccacgcgacc accgaggtct tcttcgacaa cgtcgaggtt
     3781 ccggcggaaa acctgatcgg cgaagagggc gggggcttcc gctacgtgct ctcgggcatg
     3841 aacgccgagc ggatcctgat cgcggcggac tgcatcggcg acgccaagtg gttcatcgag
     3901 aaggccagcg cctacgccag cgagcgcgtc gtgttcggcc gtcccatcgg ccagaaccag
     3961 ggcatccagt ttccgatcgc gcgggcctac gcgcaaatgc gggccgccga gctcatggtg
     4021 catcacgccg cgcgcctgtt cgagagcggc aaggattgcg gcgccgaggc caacatggcg
     4081 aagctgctcg ccgcggacgc gtcgtgggcg gcggccgagg cgtgcgtcca gacccatggc
     4141 ggctacgcct tcgccgagga atatgacgtc gagcgcaagt tccgcgagac ccgcctgtac
     4201 caggtggcgc cgatctccac caacctgatc ctcagctacc tgtcggaaca cgtgctcggg
     4261 atgccgagat cctactgacg agccctggct gggcctggag ggcttcgtga ccgtcccgac
     4321 ggaacaggcg ttgcggcgct tgtcggaccg gcgcggccgc ggtgcggcat caggttgagg
     4381 tggacacgac aggcgccgtg gggtcgccgg tcttttcccg ctcaggcagg catgcttgat
     4441 tggcgcgata agcggaacgt aaactccgcg aagggctggg aggacgaaca tgcttactgg
     4501 caagatgacc gcggtcgcgg cggcgttgct cgcgctgtcg acggctgccg cggacgcgaa
     4561 ggacaaggtc aaggtcgcct tcatcggccc gctgacgggc ggcgtcgcgg ccaacggcct
     4621 cggcggccgc aactctgcgg agctggcggt ccggttgagg aacgccgacg ccaaggcgaa
     4681 atacgaatac gagctcgtgg tgctcgacga cgagtgcaag ccgaacgtcg ccgtccaggt
     4741 cgccacgaag gccggcgccg accgtggcgt gatcgcggca gtcgcccact attgctctgc
     4801 ggcggcgatc gcgaccatcg acgtgtatca ccgcttcggc ctgccgatgg tcgtgtgggg
     4861 cgctgtgctg cccgacatca cctaccgcaa gaagctgccc gagctgcatc gcgtcaacgg
     4921 caccatgatc aaccagaacg aggtcgcggc caagctcgtg gccgggctcg gatacaagcg
     4981 ctgggtctcc atccacgaca cccccgacta cggcaaggcg cacaacgaat atttcacgaa
     5041 atcggtaaaa ccgctcggcg gggagatcct cggcgccttc ggggtgacgg ctgaccagca
     5101 ggatttcacg gcggagctca cgcaggcgaa ggccttgaac ccgcaggtga tctatttcgg
     5161 cgggctcacg ccgatcggca tccgcattcg ctcgcagatg gacaggctcg gcatcaatgc
     5221 ggtgttccag ggcacctcgg ggatcaagtc ggacgcctat atccagggcc tcggcacgct
     5281 cgccgaaggc tcgctcagct tcatcgaagg cgcgcccatc gagaagctgc ccggcggcaa
     5341 gttcttccag gagcaatacg acaaggccgg ctacaaggag ccgcccgagg cctacggcgc
     5401 cttcgccttc gctgccatgc agctggtcct ggacaagatc gaggccgtcg gtcccgaccg
     5461 cgtcaaggtg cgcgacgcgc tcggcaaggt cgagaattac gactccatcg tcgggcccgt
     5521 gaccttcgac gaccatggcc agaacacggt gccgctgatc tccaaatacg tcgtccagga
     5581 cggcaagtgg gtgatctggg aagacagcga atacgccagc ggcaagcgca agctgccggg
     5641 ccaataagcg agccccgggc acgggccgtg tggtccgtgc ccatcgtctc agagcggcag
     5701 ccggggaacc cgcgtggaca tcgccctgtt cggacaattc gtcgtcaacg ggctcatgct
     5761 cggtctcatg tacgggctgg tggcggtcgg gttcacgctg ttcttcggcg tgctcgacgt
     5821 catcaagttc tcgcacgggg acgtgctgac cgtgggggct ttcgccggct tcgccacgta
     5881 tctcggcttg aaggcgctgc agatttcgtc gccctggctg cagctgctca tcgtcgcgct
     5941 cgtcgccatg ctgctcatgg ctgcgctcgg cgcggtgatc gcgcgctggg tcgtgctgcc
     6001 gctgcgcggc gcgccggcgc tcaacacgct gctgatcacg ctgatgctcg gcaccgtgct
     6061 gcgcgaggcg gtgcggctgt tcttccccga cggggcgaac ccgaagccct tcccggcgct
     6121 cctgcccacc accgcctata cctggggcag cttcacgctc aggctcgaca gcgccatcct
     6181 gctggcggcc ggcatcgcca tgatcgccgc cgtgcatctg ctgatcaaca agtcgaagct
     6241 cggcctcgcc atccgcgccg tcgcgcagga cgccgagacg gcgcgcacca tgggcatcaa
     6301 cttcaccttc gtcgtgctca ccacttttgc cctcggctcg gcccttgccg ccttcgccgg
     6361 cgtgatgaac gggctctact acaacgagat caacttcggc atggggctgc tgctcggggt
     6421 gttcggcttc agcgccgccg tggtcggcgg gctcggcaat atctacgggg ccatcctggg
     6481 cggcttcctg ttcgccgcct tgcagacgat cggcgcggtc gcgctgccct ttgctagcgc
     6541 ctacaaggac gtgttcgcgc tcgccgtgat catcgcgatc atgacgtggc ggccgaccgg
     6601 ccttatcgcc gagaagtcag gcgagcgggt ttgatcagcg tgaagaccca cctctcgccg
     6661 ctac
//
LOCUS       DATAIQ010000899         1779 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_207173, whole genome shotgun sequence.
ACCESSION   DATAIQ010000899 DATAIQ010000000
VERSION     DATAIQ010000899.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1779)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1779)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1779
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_207173"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..406
                     /locus_tag="VHN20_14820"
     CDS             <1..406
                     /locus_tag="VHN20_14820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015857645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-linked oxidase C-terminal domain-containing
                     protein"
                     /protein_id="HEX2727090.1"
                     /translation="GEVATALWQEIRDVAPLAEPRDRAVWRVSTAPTGGPPLAAQIAR
                     ARDARWYYDWSGGLLWIATAAAGDAGAAAIRAAVREHGGHATLIRAPAEVRAAVDVFQ
                     PLSPAVMQLTAGIKAAFDPAGILNPGRMYAGI"
     gene            435..1046
                     /locus_tag="VHN20_14825"
     CDS             435..1046
                     /locus_tag="VHN20_14825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019996663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2585 domain-containing protein"
                     /protein_id="HEX2727091.1"
                     /translation="MRDGGPARADVGATRSPLTIALLTGAVVAAAALVLLWMGRLPIC
                     KCGYVKLWHGVVNSAENSQHLSDWYTFSHVIHGILFYAGLWLVSRMAGRRMSLGLALL
                     LATVLEAGWEIFENTEFVIDRYRQATIALDYHGDSIVNSVADIVAMIAGFLLAARLPV
                     VASIAVVAALELGVGYRIRDNLTLNVIMLLWPLESIKTWQGGA"
     gene            1149..>1779
                     /locus_tag="VHN20_14830"
     CDS             1149..>1779
                     /locus_tag="VHN20_14830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003597923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HEX2727092.1"
                     /translation="MQTNFTPEQLGDPAMQSSEKILRTCVHCGFCTATCPTYLLLGDE
                     LDSPRGRIYLMKEMFESGKPATPEVVKHIDRCLSCLACMTTCPSGVHYMHLVDHGRAY
                     IETTYQRPWHDRLIRWLLARVLPYPKRFRLALAAARLGKPLKGAVGALPLVGNRLWAM
                     LELAPARLPARAPTEDPGVFKAEGARRGRVALLSGCAQPILKPAFNRAAI"
BASE COUNT          256 a          634 c          600 g          289 t
ORIGIN      
        1 gggcgaggtc gcgacggcgc tgtggcaaga gatccgcgac gtggcgcccc tcgcggagcc
       61 gcgcgaccgg gcggtctggc gcgtttcgac ggcgccgacc ggcgggccgc cgctcgccgc
      121 gcagatcgca cgcgcccgcg acgcgcgctg gtactacgat tggagcggcg ggttgttgtg
      181 gatcgcgacg gccgccgcgg gagacgcggg cgccgccgcc atccgtgcgg ccgtgcgcga
      241 gcatggcggg cacgccacgc tgatccgcgc cccggccgaa gtccgcgcgg ccgtcgacgt
      301 gttccagccg ctgagtccgg ccgtgatgca gctcaccgcc ggcatcaagg cagcgttcga
      361 tcctgcaggc atcctcaacc cggggcgcat gtatgcgggc atttgacggc gccgccccct
      421 cgtccggcga aaagatgcgc gacggcggcc ccgcccgagc cgatgtcggc gccacgcgct
      481 cgccgctcac gatcgccctc ctcacagggg cggtggtcgc ggccgctgcc ctcgtcctcc
      541 tgtggatggg ccgcttgccg atctgcaaat gcggctacgt gaagctctgg cacggcgtcg
      601 tgaacagcgc cgagaactcg cagcatctca gcgactggta caccttcagc cacgtcatcc
      661 acggcatcct tttctacgcg ggcttgtggc tggtctcgcg catggcggga cggcgcatga
      721 gcctcggcct ggccctgctc ctcgccaccg tgctcgaggc cggctgggag attttcgaga
      781 acacggagtt cgtgatcgac cgctaccggc aggcaaccat cgcgctcgac tatcacggcg
      841 acagcatcgt caattcggtc gccgacatcg tggcgatgat cgctggtttc cttctcgcgg
      901 cgcgcctgcc ggtggtggcc tcgatcgcgg tcgtggcggc gctggagctc ggcgtcggct
      961 atcggatacg cgacaatctc acgctcaacg tgatcatgct tttgtggccg ctggaaagta
     1021 taaagacgtg gcaaggcgga gcttgatacg tcatcgcgag ccggcggggg cgagatccgg
     1081 gagcgtcgtc acaggacgct gtcgcggccc cggaccgcgt cacgccgcgc agggtgacag
     1141 ctaggatcat gcagaccaat ttcactcccg agcaactcgg cgacccggcg atgcaatcgt
     1201 cggaaaagat cctgcgcacc tgcgtgcatt gcggcttctg caccgcgacc tgcccgacct
     1261 acctcttgct cggcgacgag ctcgatagcc cgcgcggccg catctacctg atgaaggaga
     1321 tgttcgagtc gggcaaacca gcgacgcccg aggtcgtcaa gcatatcgac cgctgcctct
     1381 cgtgcctcgc ctgcatgacc acctgcccct cgggcgtgca ttacatgcac ctcgtcgatc
     1441 acggccgcgc ctatatcgag acgacctatc agcgcccctg gcacgaccgc ctgatccgct
     1501 ggcttctcgc cagggtgctg ccctatccga agcgcttccg tcttgcgctc gccgcggccc
     1561 ggctgggcaa gccgttgaag ggagccgtcg gcgcgctgcc gctggtcggc aaccggctct
     1621 gggcgatgct cgaactcgcg ccggcgcggc tgccggcgcg cgcgccgact gaggatcccg
     1681 gcgtcttcaa ggcggagggg gcgcgccgcg gccgcgtcgc gctgctgtcg ggctgcgccc
     1741 agccgatcct gaagcccgcc ttcaaccggg ccgccatcc
//
LOCUS       DATAIQ010000900         2248 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_253207, whole genome shotgun sequence.
ACCESSION   DATAIQ010000900 DATAIQ010000000
VERSION     DATAIQ010000900.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2248)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2248)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2248
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_253207"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..348)
                     /locus_tag="VHN20_14835"
     CDS             complement(<1..348)
                     /locus_tag="VHN20_14835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016918652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HEX2727093.1"
                     /translation="MGNLKKNGGSRGVQYAALPYRKRADGRVEVMLVTSRGTRRWVIP
                     KGWPMKGRKPHAAAAREALEEAGLVGQVGKEPIGSYSYDKRLKGGMAIPCRVAVFPFA
                     VKSQRKRWPEKGER"
     gene            757..1695
                     /locus_tag="VHN20_14840"
     CDS             757..1695
                     /locus_tag="VHN20_14840"
                     /inference="COORDINATES: protein motif:HMM:NF019896.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-Ala-D-Ala carboxypeptidase family
                     metallohydrolase"
                     /protein_id="HEX2727094.1"
                     /translation="MSPPLSLRRPPRAQRRRRIPLSPWHYLGAALLALVGTGVIAVLD
                     RSKNGNGGQSASVQVAKALDSAAKPPAPDPARPVADATVTQSTTRAAAPTTSVPAAAP
                     RSLFAELPAVPESSAPPEGPAVTASVAAVAPPPRQPAAQAPAPAPAASGQPGAAALQA
                     AVTRRSVAVNANAATDCLPDDIRALLAEVGRQFGPITIVSTNKHMTGNHSAGSVREKH
                     HLDCRAVDFKPDRHRVEAIKTYLRDRSEISGVDSYRSGMIHIDFHTTRSAGRAAPPTR
                     AAAAASAQALEAPAEEPAAPPQPPSPFTPALPPWQR"
     gene            1841..>2248
                     /locus_tag="VHN20_14845"
     CDS             1841..>2248
                     /locus_tag="VHN20_14845"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025033.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX2727095.1"
                     /translation="MVEWSDGYVTSIEYTSGFYPGLSPLAQNFAMLFRGHEPVPLSQG
                     FTYCELGCGHGFSTALVAAANPNGSFWGIDFNPSHISSAEQLARAAGIANVTYVEQSF
                     AETLRADLPRFDFISLHGVWSWVTRENRKAIIDL"
BASE COUNT          349 a          848 c          703 g          348 t
ORIGIN      
        1 gcgctcgccc ttctcgggcc agcgcttgcg ctggctcttc acggcgaacg ggaacacggc
       61 gacccggcac gggatggcca tgccgccctt gagccgcttg tcgtaagaat acgagccgat
      121 cggctccttt ccgacctgcc cgacgaggcc ggcctcctcg agcgcttcgc gcgccgccgc
      181 ggcatggggc ttgcgccctt tcatcggcca gcctttggga atgacccagc ggcgcgtgcc
      241 gcgcgaggtc acaagcatga cctcgacgcg gccgtcggca cgcttgcgat acggcaaggc
      301 tgcgtattgg acaccgcgcg atccgccgtt cttcttcagg ttccccatca gttgccggat
      361 ataatgccga aacatgtgca atgtagcgtc gcaaattaaa aaacctgagc ggccatgtta
      421 acttgtcctc aactaaaaca gccggcgcgc cactagccgc cacagctttg cggctggcgc
      481 tcctaccgcc gctcgcacaa ccgcaggttc gccgccccgg accgacgctg catcgccacg
      541 cacgcgcgtg cccgtatcga gcacgcccga tcgaccgtaa cgctttgggc ggatccatgg
      601 tcggggcgcg cgaagagatt tattcccgtg cgaggctcgc ccggacgcct gacatagtct
      661 cgccgcaatg gtaaacccct cttaacttga ctggagacgc tgatcgggac ggtccgttaa
      721 gtgccgccct ctcggcgggt gggggagttg agtattgtgt cgccgcctct gagtttgcgc
      781 cgtcctccgc gcgcgcagcg ccgccggcgc attccgctgt cgccctggca ttacctgggc
      841 gcggcgttgc tcgccctggt gggaaccggc gtgatcgccg tcctcgacag gtccaagaac
      901 ggcaatggcg ggcagtctgc ttccgtgcag gtcgcgaaag ccctcgacag cgccgccaaa
      961 ccgcccgctc ccgaccccgc ccgcccggtg gcggatgcca ccgtgaccca gtccacgacc
     1021 cgcgcagccg cgcccacgac gagcgttcct gccgcagcgc cgcggtcgct gttcgcggag
     1081 ctgccggcgg tgccggagag cagcgcaccg cccgagggcc cggccgtgac agcgagcgtc
     1141 gcggcggtgg ctcccccgcc gcgccagccc gccgcgcagg cccccgcccc ggcccctgcc
     1201 gcaagcggcc agcccggagc cgccgcgctt caggccgccg tgacgcgccg ttcggttgcg
     1261 gtcaatgcaa acgccgccac cgattgcctg cccgacgaca tccgggcgct ccttgccgag
     1321 gtcggccggc aattcggccc gatcacgatc gtctcgacga acaagcatat gaccggcaat
     1381 cacagcgcgg gcagcgtgcg tgagaagcac cacctcgatt gccgcgccgt cgatttcaag
     1441 ccggaccggc accgcgtcga agcgatcaag acctatctgc gcgaccgcag cgaaatctcc
     1501 ggcgtcgaca gctaccgcag cggcatgatc catatcgact tccatacgac ccgcagcgcc
     1561 ggccgcgccg ccccgccgac gcgcgctgcc gccgcggcga gcgcgcaggc cctcgaagct
     1621 ccggccgaag agcccgccgc cccgccgcag ccgccgagcc ccttcacgcc cgccttgccg
     1681 ccctggcaac ggtgacgccg ccgtagcgcc cgcacgtcgc gagcgcctgg caccgcccct
     1741 ccgtctttcc acctttgcgc gcgtcacccg gcaacgtggt ggccacctcg ccggatcatg
     1801 ctctaagctg caaggaggat cggggaagga tcacgggctc atggtcgagt ggtcggacgg
     1861 ctacgtcaca agcatcgaat acacgtcggg tttctacccc gggctctcgc cgctggcgca
     1921 gaacttcgcc atgctgttcc gcggccacga gccggtgccg ctgtcgcaag gcttcaccta
     1981 ttgcgagctc ggctgcggac acggcttcag caccgcgctc gtggcggcgg ccaatccgaa
     2041 cgggtccttc tggggcatcg acttcaaccc gtcgcacatc tcgagcgccg agcagctggc
     2101 gcgcgccgcc ggcatcgcca acgtcaccta cgtcgagcag agctttgccg agacgctgcg
     2161 cgcggacctg ccgcgcttcg acttcatctc gctgcacggc gtctggtcgt gggtgacgcg
     2221 cgagaaccgc aaggcgatca tcgacctg
//
LOCUS       DATAIQ010000901         3341 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_345526, whole genome shotgun sequence.
ACCESSION   DATAIQ010000901 DATAIQ010000000
VERSION     DATAIQ010000901.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3341)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3341)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3341
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_345526"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..330
                     /locus_tag="VHN20_14850"
     CDS             <1..330
                     /locus_tag="VHN20_14850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HEX2727096.1"
                     /translation="GLGRDQMVGSAGADVFDFNALADSVVGANRDVVYFEHAEGDKID
                     VSNIDANAAVGGNQAFAFIGGAGFSGAAGQLRFSGGVLQGDVNGDGNADFEVRIVGTL
                     IAGDVIL"
     gene            891..>3341
                     /locus_tag="VHN20_14855"
     CDS             891..>3341
                     /locus_tag="VHN20_14855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727097.1"
                     /translation="MPAIVVNGTAGNDTLVVTATSFDSGFYQLNSDPVQGFSGATGFT
                     FNALAGNDVFTITNPVGTLFNAGGVGIFYNAGGDPTDAFNNLGGVATFGSYDPNAGFQ
                     LTHLGAVVQAVQFTGLLPTGLITDTVSDSNSFTIFGTPGADTLTVTDGGVVDGGATTQ
                     VNSNTAADIRVSNKPLLIINGNGGGDTINFNNPTPAAGLTEVDVLGVGAVTQSGAVNY
                     QNLSLNVSGPVTLNGANDVDNIAAVVTGAGNAFAFNDVDDITITSVGGLAGITTTNGN
                     ITVTTDNGVINVNSVAVPFEIDAGSASVTLRAGSTGVADNAIVLASGADVRGTGGVTL
                     TADNIQFNIANSVNAGTATATLQPFQDGTLIDVGGPDAPNTLGVSDLELDQITAGTIV
                     IGNTKAGNLTVTAPISPAGSNTLILKSGGTVTDAVAGALLLSNVGAQGLSGVVIDNPA
                     NTFTNFEAEATTGGITLVHFGALTIGDVTNDLRGLFVTTSGNIDVLNTGSITLTDING
                     AESVHGGSTSGDVILTAVGALADITSTVNRDAINAPAGNIVLTAGQDVKFGTAGLDFD
                     NDVRASGNITFVAGRDIVVDGFSDVASDDQGKDTGGSVFLTAGRDVNITDINGVDASV
                     SAEGKGGGDVTITAGADRFLNLTANSSQAVFSRSGDVTVNADRVVIASDSGITTNNGS
                     VNLLPVSAAWTIDLGSAGDGAANTLELSDAELDRIFTQTLRIGNLGNTGPINVTSQIT
                     GTTYPTLSLSTAGGVVDATGGEQTDLTVTRLAVRSGNGIGSANDLDTAVSFLAFQNTG
                     GAVNISNTGALTIDTVDGL"
BASE COUNT          613 a         1162 c         1042 g          524 t
ORIGIN      
        1 ggcctcggcc gcgaccagat ggtgggcagc gccggcgccg acgtgttcga cttcaacgcc
       61 ctggcggact cggtcgtcgg cgccaaccgc gacgtcgtct atttcgagca cgccgagggc
      121 gacaagatcg acgtctccaa catcgacgcc aacgctgccg tcggcggcaa ccaggctttc
      181 gccttcatcg gcggcgccgg cttctcgggc gcggccgggc agctgcgctt cagcggcggc
      241 gtcctgcagg gcgacgtcaa cggcgacggc aacgccgatt tcgaggtgag gatcgtcggc
      301 acgctcatcg ccggcgacgt gatcctgtag ctgcgcgctt cgggcgcgtg ctgccggagg
      361 cgtggtttgc gttggcccgt cgcacgccgg cggcgggtgg gatcgacgga gcactgatcc
      421 ggacttgatc cggatcatgc gcgtggaaga tggcgagcgg accggtttga tccgagccgg
      481 tggggctccg gcgcccgggc tgcttgcgca gggcgggcgc atgttttgcg atcgaccgga
      541 gccgtgcacc gcgtgcggaa ccggcacagg atttctattg ctccacctgc cgcgggatca
      601 aagcgggcaa gtcagatcgc cgtacgatta ctgccgcgcg ttccgccggt tgcaagcact
      661 cgactgaatt cacaacagaa tttccttgac attactttcg cggcgagcag gatgggcggc
      721 aacgcgggag tggggatgtc cagacgatag tttccggaaa ttgtgacgac tggcgcgcgt
      781 taacggagcg cgccggcttt gtccgcccgt cctcctgatc gcgaaaagac cggggcacca
      841 aacccggttc cagggatgca tgatttcagg gatgcacgga ggaaacgtcc atgcccgcca
      901 tcgtcgtcaa cggcactgcc ggcaatgaca cgctcgtcgt caccgcaacc tcattcgaca
      961 gcggcttcta ccagctgaac agcgaccccg tgcaggggtt cagcggcgcg accgggttca
     1021 ccttcaacgc ccttgcgggc aacgacgtct tcacgatcac caaccccgtg ggcaccctgt
     1081 tcaacgcggg cggcgttggc atcttctaca atgccggcgg cgatccgacg gacgcgttca
     1141 acaacctggg tggcgtcgcg accttcggtt catacgaccc gaatgcaggc ttccagctca
     1201 cgcatctcgg ggcggttgtc caggccgtcc agttcaccgg cctgcttccc acagggctga
     1261 tcacggacac ggtcagcgac agcaacagct ttacgatctt cggcacgccc ggcgcggaca
     1321 cgctgaccgt caccgacggc ggcgtcgtgg acggcggcgc gaccacgcag gtcaacagca
     1381 acacggccgc ggacatccgc gtcagcaaca agccgctgct gatcattaac gggaatggcg
     1441 gcggcgacac gatcaacttc aacaatccaa cccccgcggc aggcctgacc gaagtggacg
     1501 tgctcggtgt cggcgctgtg acgcaatcag gcgccgtgaa ctatcagaac ctgtccctga
     1561 acgtatccgg gccggtgacg ctcaacggcg ccaacgacgt cgacaacatc gccgccgtgg
     1621 tgacgggcgc gggcaacgct ttcgccttca acgacgtcga cgacatcacg atcacgtcgg
     1681 tcggcggcct tgccggcatt acgacgacca acggcaacat caccgtgacc acggacaatg
     1741 gcgtcatcaa tgtcaattcg gtggcggtcc cgttcgagat cgatgcaggc agtgccagcg
     1801 tcactctcag ggccgggtcg acaggcgttg cagacaacgc aatcgtcctc gcctccggcg
     1861 cggacgtgag gggcaccggg ggcgtgacgc tcacggccga caatattcaa ttcaacatag
     1921 ccaacagcgt caatgcgggc actgcgaccg cgaccctgca gccgttccag gacgggacgc
     1981 tgattgacgt cggcggcccc gacgcgccca acacgcttgg ggtgagcgac ctcgagcttg
     2041 accagatcac cgcgggcacc atcgtcatcg gcaacaccaa ggccggcaac ctcaccgtca
     2101 cggcgccgat cagccccgcc gggtcgaaca cgctgatcct gaagtccggc ggcaccgtca
     2161 ctgacgcggt cgccggcgcg cttctgctgt cgaatgtcgg ggcgcaaggc ctgagcggtg
     2221 tcgtcatcga caaccccgcc aataccttca ccaatttcga ggctgaggcg accactggcg
     2281 gcatcacgct cgtccacttt ggcgccctca ccatcggcga cgtcaccaac gacctgcgcg
     2341 gcctgttcgt cacgacctcg ggcaacatcg acgtgctcaa cacgggctcg atcacgctca
     2401 ccgacatcaa cggcgccgag agcgtgcacg gcggctcgac gtcgggcgac gtcatcctga
     2461 ccgccgtcgg agcattggcc gacatcacca gcacggtcaa ccgcgacgcc atcaacgccc
     2521 cggccggcaa catcgtcctg acggccgggc aggacgtcaa gttcggcacc gcgggtctcg
     2581 atttcgacaa cgacgtccgc gccagcggca acattacctt cgtcgccggc cgcgacatcg
     2641 tcgtcgacgg cttctccgac gtcgcctcgg acgaccaggg caaagacacc ggcggcagcg
     2701 tcttcctcac ggccggacgc gacgtcaaca tcaccgacat caacggcgtc gacgcgtcgg
     2761 tgagtgccga gggcaagggc ggcggcgacg tgacgatcac cgccggcgcc gatcgtttcc
     2821 tcaacctcac cgccaactcg tcgcaggcgg tgttctcgcg gtccggcgac gtcacggtca
     2881 acgccgaccg ggtggtgatc gcgagcgatt ccggcatcac caccaacaac ggatcggtca
     2941 acctgctccc ggtcagcgcc gcctggacga tcgacctcgg ctcggccggc gacggggccg
     3001 cgaacacgct cgagctgtcg gatgcggagc tcgaccgcat cttcacgcag acgttgcgca
     3061 tcggcaatct cggcaacacc gggcccatca acgtcaccag ccagatcacc ggcacgacct
     3121 atccgacgct atccctgagc acagccggcg gcgtcgtcga cgcgacgggc ggtgagcaga
     3181 ccgatctcac ggtcacccgt ctcgccgtgc gctccggcaa tggcatcggt tcggcgaacg
     3241 acctcgacac cgccgtctcg ttcctggctt tccagaacac gggcggcgcc gtcaacatct
     3301 ccaacaccgg cgcgctcacc atcgacacag tcgatggcct c
//
LOCUS       DATAIQ010000902         2953 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_160782, whole genome shotgun sequence.
ACCESSION   DATAIQ010000902 DATAIQ010000000
VERSION     DATAIQ010000902.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2953)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2953)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2953
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_160782"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(121..831)
                     /locus_tag="VHN20_14860"
     CDS             complement(121..831)
                     /locus_tag="VHN20_14860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017265100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02594 family protein"
                     /protein_id="HEX2727098.1"
                     /translation="MNILEIQTALKGKGFDPGDLDGQWGRRTIAAVKAFQAAKGLDVD
                     GIAGPRTLAVLNGVASAPAVAGTPASANGPLVWFEEALRLVGTKEMRGTGSNPTIIHW
                     AEKCNIDYDSDDIPWCGLFVAHCIAATLPDEPLPNGPLGARNWRRLGTQSKPVQGAVL
                     VFWRGKRDGALGHVGFYRSEDNDAYHVLGGNQSDSVSTCRIGKDRLLAARWPSTAASL
                     KGEVVTAQSSEALSHNEA"
     gene            956..1255
                     /locus_tag="VHN20_14865"
     CDS             956..1255
                     /locus_tag="VHN20_14865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyU family transcriptional regulator"
                     /protein_id="HEX2727099.1"
                     /translation="MLSIFRTLWQRVAGGSGGTAQDVAVDPVEYGGYRIRPAPYPAGA
                     GYQTAGVIEKDFAEGVKEHRFVRAETHPSRDDAVAFSITKAKQIIDQQGDRMFGG"
     gene            1363..2592
                     /locus_tag="VHN20_14870"
     CDS             1363..2592
                     /locus_tag="VHN20_14870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006202807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX2727100.1"
                     /translation="MTATAPTTDIDGRAAWLRLAIAVVLSTIGGVGLWSAVVALPAVQ
                     AEFGTARADAALPYSLLTISFGFGGVLMGRLADRVGIAWPAGIGALLLGLGYVAAAAA
                     PSMLTFALAHALLIGIGSSATFAPLIADTSHWFVRRRGIAVAISACGNYLAGTLWPPV
                     VQHLIDTAGWRKTHVVIGVICVAAMLPLVFALRRRAPAQDDASARGAAAPQHSLAVSP
                     AALQVLLVVAGLACCVAMSMPQVHIVAYCGDLGYGVARGAEMLSLMLGFGIVSRVASG
                     FIADRIGGLYTLLIGSLLQGVALFLYLLFDGLASLYVISALFGLFQGGIVPSYAIIIR
                     EYFSPQEAGTRVGLTIMATLFGMALGGWLSGLIFDLTGSYRAAFANGLAWNLLNGAVV
                     LWLIWRSGAPRLRPAVA"
     gene            2751..>2953
                     /locus_tag="VHN20_14875"
     CDS             2751..>2953
                     /locus_tag="VHN20_14875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEX2727101.1"
                     /translation="MNRMSKGLVVGAAAGMLLAAVMTPGPAAAQTYPERGLTLIVPYG
                     AGGGTDVTARLLARDLEAVLGKPV"
BASE COUNT          396 a         1031 c         1008 g          518 t
ORIGIN      
        1 ggtgaaccgc gtgccgtcgg ccggctttca cggccggcgg ctgagcgaag cgccctgtga
       61 cgttgatgcg agcgcaggac cacgttttgc gcaagctcag gagaccgcac cgactggcga
      121 tcacgcctca ttgtgcgaca acgcttcgct gctttgggcg gtcacgacct cgcctttgag
      181 gctcgccgcc gtgctgggcc agcgcgccgc aagcagccgg tccttgccga tgcggcaggt
      241 gctgacgctg tcgctctggt tgccgccgag cacgtgatag gcgtcgttgt cctcgctgcg
      301 gtagaatccg acatgaccga gagcgccgtc ccgtttgccg cgccagaaca ccagcaccgc
      361 gccttgcacc ggtttcgact gcgttccgag tctgcgccag ttgcgggcgc cgagcgggcc
      421 gttcggcaag ggctcatcgg gcaacgtcgc ggcgatgcaa tgcgccacga acaatccgca
      481 ccacgggatg tcgtcgctgt cgtagtcgat attgcacttc tccgcccaat ggatgatcgt
      541 cggattggag ccggtgcccc gcatctcctt cgtgccgacg aggcgcagcg cctcctcgaa
      601 ccacaccagc gggccgttcg cggacgcggg tgttccggcc accgctggcg ccgaagcgac
      661 cccgttcaac acggcgagcg tgcgcgggcc ggcgatgccg tccacgtcga ggcctttcgc
      721 cgcctggaag gcttttacgg cggcgatcgt ccgccggccc cattggccgt cgagatcgcc
      781 cggatcgaag cccttcccct tcaacgccgt ctgaatctcc aggatattca tggcctccct
      841 ccggatgcca ggccgcgtcg acggcgatgg ctgcgtgctc gtcgacgcta ccctggcgcg
      901 cgcgggccat gtgtgatttc gtgcacgtac acatcagaat gcggagaggg cgtcggtgct
      961 ttcgatcttc aggacacttt ggcagcgcgt cgccggcggc agcggcggga cggcgcagga
     1021 cgtcgcagtc gatcccgtcg aatacggtgg ttatcgcatc cggccggcgc cgtatccggc
     1081 gggggccggc taccagaccg ccggcgtgat cgagaaggat tttgccgaag gggtgaagga
     1141 gcaccgcttc gtgcgtgccg agacccatcc gagccgcgac gacgcggtgg cgttctcgat
     1201 caccaaggcg aagcagatca tcgaccagca gggtgaccgc atgttcggcg gctgagcagg
     1261 ccttttgcgc gaacgcctcg cagccgcgcg cgcttccatg cccgatccat tgcggcgaga
     1321 tcggaacatc tccgcacgca gcacgccgaa cggagttagc ctttgaccgc aacagccccc
     1381 actaccgaca tcgacggacg cgccgcgtgg ctgcggctcg ccatcgccgt ggtgctgagc
     1441 acgattggcg gcgtcggcct gtggtccgcg gtggtggcgc tgccggcggt gcaggcggag
     1501 tttggcacgg cgcgcgccga tgccgcgctg ccgtattcgc tgctcacgat cagcttcggc
     1561 ttcggcggcg tgctgatggg gcggctcgcc gaccgcgtcg gcatcgcctg gccggccggc
     1621 atcggcgcct tgctgctcgg actcggctac gtcgccgcgg ccgccgcgcc ctcgatgctg
     1681 accttcgcgc tcgcccacgc gctgctgatc ggcatcggca gctccgcgac cttcgcgccg
     1741 ctgatcgccg acacctcgca ctggttcgtg cgccgccgcg gcatcgccgt cgccatctcg
     1801 gcgtgcggca attatctcgc gggcacgctc tggcccccgg tcgtgcagca cctcatcgat
     1861 acggccggct ggaggaaaac ccacgttgtc atcggcgtga tctgcgtcgc cgccatgctg
     1921 ccgctggtct tcgccttgcg gcggcgcgcg ccggcgcagg acgacgcatc tgcgcgcggc
     1981 gccgcggcgc cccagcacag cctcgcggtg agcccggcgg ccctgcaggt cttgctcgtc
     2041 gtcgccgggc tcgcctgctg cgtcgccatg tcgatgccgc aggtccacat cgtcgcctat
     2101 tgcggcgatc ttggttacgg ggtcgcgcgc ggcgccgaga tgctgtcgct gatgctcggc
     2161 ttcggcatcg tcagccgcgt cgcctcgggt ttcatcgccg accgcatcgg cggcctctac
     2221 acgctgctga tcggctcgct gctgcaaggc gtggcgttgt tcctgtatct gttgttcgac
     2281 gggctcgcct cgctctacgt gatctcggcc ctgttcggcc tgttccaggg cggcatcgtg
     2341 ccgagctacg ccatcatcat ccgcgaatat ttttcgccgc aggaggccgg cacccgcgtc
     2401 ggcctgacca tcatggcgac gctgttcggc atggccttgg ggggctggct gtcgggcctg
     2461 atcttcgacc tgaccggctc ctatcgggcg gccttcgcca acggcctcgc ctggaacctc
     2521 ctcaacggcg ccgtcgtgct ctggctgatc tggcgcagcg gcgcgccgcg cctgcggccg
     2581 gcggtggcgt gaggttttcc ggctcagtga ccaacgcgca agaaacgagc ccgcttgcgt
     2641 gagtgcttcg ccccttcccg aagccacgcc cggcggccta cactcggcgc aaacaaagac
     2701 gcgggcatgc ccggcgatcc gccggcggcc gcgacacggg gaggggattc atgaacagga
     2761 tgtcgaaagg acttgtcgtc ggtgcggcgg cgggcatgct gctggcggcg gtcatgacac
     2821 cgggaccggc ggcggcgcag acatatccgg agcgcggcct cacgctgatc gtgccgtacg
     2881 gcgccggcgg cggaaccgac gtgacggcgc ggctactcgc cagggacctg gaggcggtgc
     2941 tcggcaagcc ggt
//
LOCUS       DATAIQ010000903         2334 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_207613, whole genome shotgun sequence.
ACCESSION   DATAIQ010000903 DATAIQ010000000
VERSION     DATAIQ010000903.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2334)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2334)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2334
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_207613"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2334
                     /gene="mfd"
                     /locus_tag="VHN20_14880"
     CDS             <1..>2334
                     /gene="mfd"
                     /locus_tag="VHN20_14880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015824276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003690 - double-stranded DNA binding
                     [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HEX2727102.1"
                     /translation="LDTLLDYVEGVPVVFDALADDAAGERLAQVQDYFDARVAAQQHP
                     QPGVAPYRPLPPDALYVKPEEWSARTSGRAVARLTPFAIPESEGRIVVDLEARRGRDF
                     IAERAEDGTNVFDAVVQHVRALQASGKRVIVGAWSDGSRDRLCHVLGDHGLMQAKPVN
                     RYADALVLPKADVPVAVWGLEAGFEAGDLAVLSEQDILGDRLVRPKRKSKRPQDFLTE
                     VAALTPGDLVVHVDHGIGRFEGLQTIEAAGAPHDCLALSYAGGDRLFLPVENIELLTR
                     YGSEEAEVQLDKLGGGAWQARKSRMKKRIREMAGALMKIAAARIMKEAPRLVPAPGLY
                     DEFSARFPYEETEDQQNAIDAVMEDLSSGRPMDRLICGDVGFGKTEVALRAAFTTAMT
                     GKQVAVIVPTTLLARQHFKTFSERFKGLPLNIAQASRFTPSGELKKVKEGLTDGGIDI
                     VVGTHALLGKAIRFKDLGLIIVDEEQHFGVSHKERLKELRAEVHVLTLTATPIPRTLQ
                     LALTGVRELSLIATPPVDRLAVRTFVTPFDSLIIREALLRERYRGGQAFYVVPRIDDI
                     AEVKSFLDKEVPEAKVAVAHGQMAAGQLEDVMTAFYEGKFDILLSTTIVESGLDIPTA
                     NTLIVHRADMFGLSQLYQLRGRVGRSKTRAYALFTVPVNRTLTPQAERRLKVLQSLDT
                     LGAGFQLASHDLDIRGAGNLLGQEQSGHIKEVGYELYQQMLEEAVAQLKAGIEEPAEE
                     QWSPTIAIGAPVMIPETYVSDLQLRLGLYRRLATLETD"
BASE COUNT          390 a          808 c          772 g          364 t
ORIGIN      
        1 ctcgacacgc tgctcgacta cgtcgaaggc gtgccggtcg tgttcgacgc gctcgccgac
       61 gatgccgccg gtgagcggct ggctcaggtc caggattact tcgacgcgcg cgtggcggcg
      121 cagcagcatc cgcagccagg agtcgcgccc tatcgtccgc tgccgcccga cgcactctac
      181 gtgaagcccg aggaatggtc ggcgcgcacg agcggtcgcg ccgtcgcgcg cctgacgccg
      241 ttcgccattc cggagtcgga aggacgcatc gtcgtcgatc tcgaggcgcg gcgcggccgc
      301 gacttcattg ccgagcgggc cgaggacggc accaacgtct tcgacgccgt cgtgcagcac
      361 gtgcgcgcgc tgcaggcgtc cggcaaacgc gtcatcgttg gcgcctggtc tgacggttcg
      421 cgcgaccgtc tgtgccacgt gctcggcgac cacgggctga tgcaggcaaa gcccgtgaac
      481 cgctatgccg acgcgctggt gctgccgaag gccgacgtcc cggttgccgt gtgggggctc
      541 gaggccggtt tcgaggcggg cgatctcgcc gtgctcagcg agcaggacat cctcggcgac
      601 cgcctcgtca ggcccaagcg caaatccaag cgcccgcagg atttcctgac cgaggtcgcg
      661 gcgctcacgc cgggcgacct cgtcgtgcat gtggatcacg gcatcggccg cttcgagggg
      721 ctgcagacca tcgaggcggc cggggcgccg cacgactgcc tggcgctcag ctatgccggc
      781 ggcgaccgcc tgttcctgcc ggtcgagaat atcgagctgc tgacccgcta cggctcggag
      841 gaagcggagg tccagctcga taagctcggc ggcggcgcct ggcaggcgcg caagtcgcgc
      901 atgaagaaac gcatccgcga gatggcgggg gcgctgatga agatcgctgc cgcgcgcatc
      961 atgaaggagg cgccgcggct ggtgcccgcg cccggcctat acgacgagtt ctccgcgcgc
     1021 ttcccctacg aggaaaccga agaccagcag aacgccatcg acgccgtcat ggaggacctc
     1081 tcgtcgggcc gtcccatgga ccgcctgatc tgcggcgacg tcggtttcgg caagaccgaa
     1141 gtggcgctgc gcgccgcgtt cacgaccgcg atgacgggca aacaggtagc cgtgatcgtg
     1201 ccgacgacgc tgctcgcacg ccagcatttc aagacgtttt cggaacgctt caagggcctg
     1261 ccgctcaaca tcgcgcaggc gtcgcgcttc accccgagcg gcgagctcaa gaaggtcaag
     1321 gaaggcctca ccgacggcgg catcgacatc gtcgtcggca cgcatgcgct gctcggaaag
     1381 gcgatccgct tcaaggatct cggcctgatc atcgtcgacg aggagcagca tttcggcgtg
     1441 tcccacaagg agcgtctcaa ggagctgcgc gccgaggtcc atgtgctgac gctcaccgca
     1501 acaccgatcc cgcgcacgct tcaacttgcg ctgaccgggg ttcgcgagct gtcgctcatc
     1561 gccacgccgc ccgtcgaccg gctggcggtg cgtaccttcg tgacgccgtt cgactcgctc
     1621 atcattcgcg aggcgctgct gcgcgagcgt tatcgcggcg gccaggcctt ttacgtggtg
     1681 ccgcgcatcg acgacatcgc cgaggtcaag agcttcctcg acaaggaagt gcccgaagcc
     1741 aaggtcgccg tcgcccacgg gcagatggcg gccgggcaac tcgaggacgt gatgaccgcc
     1801 ttctacgaag gcaagttcga catcctgctg tcgacgacga tcgtcgaatc cggcctcgac
     1861 atcccgaccg ccaacaccct gatcgtccat cgtgccgaca tgttcggcct gtcgcagctc
     1921 taccagctgc ggggccgcgt cggacgttcg aagacgcgcg cctatgcgct gttcaccgtg
     1981 ccggtcaacc gcacgctcac gccgcaggcc gagcgccggc tgaaagtgct gcagtctctc
     2041 gacacgctcg gcgccgggtt ccagctcgcc tcgcacgacc tcgacatccg cggcgccggc
     2101 aacctgctcg gccaggagca gtcgggccac atcaaggaag tcggctacga gctctaccag
     2161 cagatgctcg aggaggcggt ggcgcaactc aaggcgggca tcgaggagcc cgccgaggag
     2221 caatggtcac cgaccatcgc catcggcgca ccggtcatga tcccggaaac ctatgtgtcc
     2281 gatctccagc tgcggctcgg cctttatcgc cgccttgcga cgctggagac cgac
//
LOCUS       DATAIQ010000904         1566 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_160814, whole genome shotgun sequence.
ACCESSION   DATAIQ010000904 DATAIQ010000000
VERSION     DATAIQ010000904.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1566)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1566)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1566
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_160814"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(24..1532)
                     /locus_tag="VHN20_14885"
     CDS             complement(24..1532)
                     /locus_tag="VHN20_14885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016737136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HEX2727103.1"
                     /translation="MDMFSNLALGFGVALSLQNIALCLLGCMVGTLIGVLPGVGPVAT
                     IAMLLPITFGLDPVGALIMLAGIYYGAQYGGSTTAILVNLPGESSSVVTAIDGYQMAR
                     QGKAGLALATAALASFFAGTCATLVIAVAAPALAEVALQFGPADYCSLMIFGLVSAVI
                     LAHGSVIKAIGMIFTGILLGTIGIDVNSRVPRFTFGIPQFGDGIDFAVIAMGIFGIGE
                     TIINLERSAEARGSVQQYRGLWPSPQDLRAIIPPAIRGTALGSALGILPGGGPVLSTF
                     SAYSLEKKLAADPSRFGRGAIEGVAGPEAANNAAAQTSFIPLLTLGLPSNAVMALMIG
                     ALMMQGIHPGPQLMRDKPELFWGLIASMWVGNLILVVLNLPLVGIWAKLLTVPYKVLY
                     PAILLICCIGVYSIHNDPLDVLIATLFGFVGYVLYRLQCEPAPLLLGFILGPLIEENL
                     RRALLISKGDPTVFLQRPISATFLVLTVLLIIMLAAPMIRSKRQEVFQEEEA"
BASE COUNT          309 a          487 c          553 g          217 t
ORIGIN      
        1 tgcgacagca cgatttcgag agactacgcc tcttcctcct gaaagacctc ctggcgtttc
       61 gagcggatca tgggggcggc gagcatgatg atcaggagga ctgtgaggac caggaacgtg
      121 gcgctgatcg ggcgctgcaa gaacacggtc ggatcgccct tcgagatcag cagcgcgcgg
      181 cgcagattct cctcgatcag cggcccgagg atgaacccga gcagcagcgg cgccggctcg
      241 cattgcaggc ggtagagcac gtagccgacg aagccgaaca gcgtggcgat cagcacgtcg
      301 agcggatcgt tgtggatgct gtagacgccg atgcagcaga tcaggaggat cgccggatag
      361 agcaccttgt agggcacggt gagcagcttc gcccagatgc cgaccagcgg caggttgagg
      421 accaccagga tcagattgcc gacccacatg ctggcgatga ggccccagaa cagctccggc
      481 ttgtcgcgca tcagctgcgg ccccggatgg atgccctgca tcatcagggc gccaatcatc
      541 agcgccatca cggcgttcga cggcaatccc agggtcagga gcggaatgaa cgaggtctgc
      601 gccgcggcgt tgttggcggc ctccggcccg gcgacgccct cgatggcgcc gcggccgaag
      661 cggctcggat cggccgcgag cttcttctcc agggaatagg ctgagaaggt ggacaggacc
      721 ggcccgccgc caggcaggat gccgagcgcc gaaccgagcg cggtgccgcg gatcgccggg
      781 gggatgatcg cgcgcaggtc ctgcggcgac ggccacaggc cccggtattg ctgcaccgag
      841 ccgcgcgcct cggcgctgcg ctcgaggttg atgatcgtct ctccgatgcc gaagatgccc
      901 atggcgatca cggcgaaatc gatgccgtcg ccgaattgcg ggatcccgaa cgtgaagcgc
      961 gggacgcgcg aattgacgtc gatgccgatg gttccgagca ggatgcccgt gaagatcatg
     1021 ccgatcgcct tgatcaccga cccgtgcgcc aggatcacgg cggagacgag gccgaagatc
     1081 atcagcgaac aatagtcagc gggcccgaac tgaagggcca cctcggccag ggccggcgcg
     1141 gcgacggcga tgacgagggt cgcgcaggtg ccggcgaaaa acgatgcgag cgcggcggtc
     1201 gcgagcgcga ggccggcctt gccctggcgc gccatctggt aaccgtcgat ggccgtgacg
     1261 accgacgacg attcacccgg caggttgacc aggatcgccg tggtcgagcc gccgtattgc
     1321 gcgccgtaat agatgccggc cagcatgatc agggcgccga ccggatcgag gccgaaggtg
     1381 atgggcagga gcattgcgat cgtggcgacc ggccccaccc cgggcagcac gccgatcagc
     1441 gtgccgacca tgcagccgag caaacacagg gcgatgttct ggagggacag ggcgaccccg
     1501 aaccccagcg caagattgga gaacatgtcc atcatgacgg cgccctcaga tgtggatcaa
     1561 gccggg
//
LOCUS       DATAIQ010000905         2336 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_253500, whole genome shotgun sequence.
ACCESSION   DATAIQ010000905 DATAIQ010000000
VERSION     DATAIQ010000905.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2336)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2336)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2336
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_253500"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(170..604)
                     /locus_tag="VHN20_14890"
     CDS             complement(170..604)
                     /locus_tag="VHN20_14890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012454149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727104.1"
                     /translation="MRAGVRAGAGAIIAASLSASPPVLASSYDFVPAPQTDLNRIYRV
                     DRVTGEVISCQYGLQEGSVGATLCFAAGEGAGPQAPAEYGLVSSRHEREGGVFRVNYR
                     TGAMSVCYVFDERVVCTPQTSPGAGGPTGTGAIPSPPAPRAR"
     gene            695..1411
                     /gene="gph"
                     /locus_tag="VHN20_14895"
     CDS             695..1411
                     /gene="gph"
                     /locus_tag="VHN20_14895"
                     /EC_number="3.1.3.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018045236.1"
                     /note="PGP is an essential enzyme in the glycolate salvage
                     pathway in higher organisms (photorespiration in plants).
                     Phosphoglycolate results from the oxidase activity of
                     RubisCO in the Calvin cycle when concentrations of carbon
                     dioxide are low relative to oxygen. This enzyme is a
                     member of the Haloacid Dehalogenase (HAD) superfamily of
                     aspartate-nucleophile hydrolase enzymes (PF00702); Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0008967 - phosphoglycolate phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA];
                     GO_process: GO:0009853 - photorespiration [Evidence IEA];
                     GO_process: GO:0043094 - cellular metabolic compound
                     salvage [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycolate phosphatase"
                     /protein_id="HEX2727105.1"
                     /translation="MMRSLAPTAVFDLDGTLADTAPDLVATLNAVLAREGLPALPLAE
                     AREMIGHGARALIERGLEAAGREATPDHLDELYRFFLAYYAENLCVETRLFPGVVKAL
                     DHLDAEGFRLAVCTNKVKAHSVKLLEALGLAHRFTVICGRDSFPYVKPDPRHLTLTIE
                     AAGGSPRHAIMVGDSRTDIVTAKTAKIPVIAVTFGYTDVPVRQLGPDLVIDHYDELAG
                     AVRGLVPSGRAAPSAVASAL"
     gene            complement(1445..1519)
                     /locus_tag="VHN20_14900"
     tRNA            complement(1445..1519)
                     /locus_tag="VHN20_14900"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1485..1487),aa:Val,seq:cac)
     gene            1768..>2336
                     /locus_tag="VHN20_14905"
     CDS             1768..>2336
                     /locus_tag="VHN20_14905"
                     /EC_number="2.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012335653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0018104 - peptidoglycan-protein
                     cross-linking [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HEX2727106.1"
                     /translation="MRRITTALAGLVCAAAAWTAPAAAYEIDPITREPIIPYYGGSSS
                     YRPQAARSTYRQVVSFNGYGAGTVVISTAQRRLYYVLGNGQAVSYGIGVGRPGFQWAG
                     TKTITAKREWPDWTPPVQMLKRRPDLPRHMRGGINNPLGARAMYLGGSLFRIHGSNEP
                     ETIGYAVSSGCIRMTNADVVDLYSRVRVGT"
BASE COUNT          370 a          836 c          746 g          384 t
ORIGIN      
        1 cgatccaggc gccgcccaca tagcagcgct cgacgagcaa ggttggatcg ttcaacttca
       61 tgggaggagc cttcgttgcc aggatcgctc cctcttacag ggcagcggcg ccaagcaaaa
      121 gccgggcggc gccgcccgcg cgcttatgct cgcaattgca ctgggctgct taccgggccc
      181 gcggcgccgg cggcgacggg atggcgcctg tgcccgtcgg cccgcccgca ccagggctgg
      241 tctgcggcgt gcacacgacg cgctcgtcga agacgtagca cacgctcatc gcgccggtgc
      301 ggtaattgac gcggaacacg cccccctcgc gctcatgccg ggacgagacg aggccgtatt
      361 ccgccggtgc ctgcggcccg gcgccctcgc cggcggcaaa gcacaacgtc gcgccgaccg
      421 agccctcctg gaggccgtat tggcacgaga tgacctcccc ggttaccctg tcgacgcggt
      481 agatccggtt caggtcggtc tgcggggcag gcacgaagtc ataggaggac gccaggacgg
      541 gcggacttgc cgacagcgag gcggcgatga ttgcccccgc acccgcgcgc accccggccc
      601 tcatggttaa cttcatatca aggtctcacg aatcagatgg caaggataat acgcctcgcg
      661 gcttgatcgc gcaggcgtgc acggctagcc aaagatgatg cgaagtcttg ctcccacagc
      721 cgttttcgat ctcgacggca cgctcgccga cacggcgccc gacctggtcg cgacgctgaa
      781 cgcggtgctg gcgcgggagg gcctgcccgc cctgccgctg gcggaagcgc gcgagatgat
      841 cggccacggc gcccgggccc tgatcgagcg cggcctcgag gcggccgggc gcgaggcgac
      901 gccggaccat ctcgacgagc tctatcgctt ttttcttgcc tactatgccg agaatctttg
      961 cgtcgagacg cgcctgtttc ccggcgtcgt caaggccctg gaccacctcg atgcggaggg
     1021 cttccggctg gccgtctgca ccaacaaggt taaggcccat tccgtgaagc tgctcgaggc
     1081 cctggggctg gcgcaccgct tcaccgtgat ctgcgggcgc gacagctttc cttacgtcaa
     1141 gcccgatccg cgccacctca ccctgaccat cgaggcggcc ggtggaagcc cgcgccacgc
     1201 catcatggtc ggggactcgc gcaccgacat cgtcaccgcc aagaccgcca agatcccggt
     1261 gatcgccgtg accttcggct acaccgacgt gccggtgcgg cagctcggcc cagacctcgt
     1321 catcgaccac tacgacgagc tcgccggggc cgtgcgcggc ctggtccctt cgggccgggc
     1381 ggcgccaagc gcagtcgctt cggcgctgta gcgcctccga caatctctga tgtgactttg
     1441 gggatggtgg gcgcgacagg gattgaacct gtgacccttc gcgtgtgaag cgaatgctct
     1501 cccgctgagc tacgcgccct cgaggcctta ctaggtatcg gctgccggtg cgtcaagcac
     1561 gcggcgccgg gcccccgtgc gggatggcgc agccccttgc tggcgccgat ttgggccggc
     1621 atcggcgcgg ctcgcgcctt cgtgaaggcc tcggccattg caccccccaa aaaagcttgg
     1681 ccatagctgg atcaaaagcc aagcttgggc gtttcccgat ggtcaaagtg tcgcgtctcc
     1741 tcccctagta tagttctgag gcaatccatg cgtcgtatca ccactgccct ggcagggctt
     1801 gtctgcgccg ccgcggcctg gaccgcgccg gcagcagctt atgaaatcga tcccatcacc
     1861 cgtgagccga tcatccctta ttacggtggc agctccagct accggccgca ggcggcccgg
     1921 tcgacctacc gccaggtcgt gtccttcaac ggctacggtg ccggcacggt cgtgatctcg
     1981 accgcccagc ggcgcctcta ttacgtgctc ggcaacgggc aggccgtcag ctacggcatc
     2041 ggggtcggcc gtcccggctt ccagtgggcc ggcaccaaga ccatcacggc caagcgtgaa
     2101 tggccggatt ggaccccgcc cgtccagatg ctcaagcgcc gcccggacct gccccgccac
     2161 atgcgcggcg gcatcaacaa cccgctcggc gcccgcgcca tgtacctggg cggctccctg
     2221 ttccgcatcc acggctccaa tgagccggag acgatcggct atgccgtgtc gtccgggtgc
     2281 atccgcatga ccaacgcgga tgtcgtcgac ctctacagcc gcgtccgcgt cggcac
//
LOCUS       DATAIQ010000906         1818 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_345697, whole genome shotgun sequence.
ACCESSION   DATAIQ010000906 DATAIQ010000000
VERSION     DATAIQ010000906.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1818)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1818)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1818
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_345697"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..726)
                     /gene="dapD"
                     /locus_tag="VHN20_14910"
     CDS             complement(<1..726)
                     /gene="dapD"
                     /locus_tag="VHN20_14910"
                     /EC_number="2.3.1.117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007529620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008666 -
                     2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase"
                     /protein_id="HEX2727107.1"
                     /translation="MSSNDLAATIDAAWEDRANVNAATRGAVREAVETAVNLLDAGKA
                     RVAEKANGEWRVNQWLKKAVLLSFRLNDMDVIKGGPGESTWWDKVPSKFQGWGANRFK
                     DAGFRAVPNCVVRRGAYVAPGVVLMPSFVNLGAYVDENTMVDTWATVGSCAQIGKNVH
                     LSGGAGIGGVLEPLQANPTIIEDNCFIGARSEVVEGVVVGEGSVLSMGVFIGASTKII
                     DRESGETLQGRVPPFSVVVPGSLP"
     gene            1122..1385
                     /locus_tag="VHN20_14915"
     CDS             1122..1385
                     /locus_tag="VHN20_14915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727108.1"
                     /translation="MKHFNPGEALPSSPATIEARLKAQELVLQCLCKAISSIDGRSGH
                     AMALALEVAEMEQAEIAGPEDEIVRFLRTMREACEALPTARII"
BASE COUNT          281 a          624 c          597 g          316 t
ORIGIN      
        1 cggcaggctg cccggcacca cgaccgaaaa gggcggcacg cggccttgca gcgtttcgcc
       61 gctctcgcgg tcgatgatct tggtcgaggc gccgatgaac acgcccatcg acagcaccga
      121 gccttcgccg accacgacgc cctcgaccac ctcggagcgg gcgccgatga agcaattgtc
      181 ctcgatgatg gtcgggttgg cctgcagcgg ctcgagcacg ccgccgatgc cggcgccgcc
      241 ggacagatgc acgttcttgc cgatctgcgc gcacgagccg accgtcgccc aggtgtcaac
      301 catggtgttc tcgtccacat aggcgccgag attgacgaag gacggcatca gcacgacgcc
      361 cggcgccacg taggcgccgc gccgcacgac gcagttcggc acggcccgga agcccgcgtc
      421 cttgaagcgg ttggcgcccc acccctggaa tttcgatggc accttgtccc accaggtcga
      481 ctcgcccggc ccgcccttga tcacgtccat gtcgttgagg cggaaggaca ggagcaccgc
      541 cttcttgagc cactggttga cgcgccactc gccgttcgcc ttctcggcga cccgcgcctt
      601 gccggcgtcg agcaggttga cggctgtctc caccgcctcg cgcacggcgc ccctggtggc
      661 ggcattgacg ttggcccggt cctcccaggc ggcgtcgatg gtggcggcaa gatcgttact
      721 ggacatggat ttctcaggtt ggcggtggct tgggctcggt gcttagcaat gcggcccgcc
      781 cctgtcaccc atcgacgagt tgatggcgcg acgtatggct aagatcgcgg caggttcctg
      841 gagctggtga cggcgctcgc acttcttctc catacccccg aattccggcc aaagcgcctg
      901 atcccggcga aacgccgccg catgccaagc gcgttcctcg ggtgtgaaca gctttacggc
      961 caccatgctg ccatcgcctc ctggtcgcgt tctcgcccac ggcgggcagc aactcgatat
     1021 tgcctccgga tgtggcgccc ctgactcttg tgcatgaacg gaaatctgcc gatcaaggga
     1081 gatcgcacga atcaattgta agagccgcaa gggggcctct catgaagcat ttcaacccag
     1141 gcgaggcgtt gccgtcctcg ccggcgacca tcgaggcgcg gctcaaggcg caggagctcg
     1201 tgctgcaatg tctgtgcaag gcgatctcgt cgatcgacgg ccgcagcggc catgccatgg
     1261 cgctggcgct cgaggtggcc gagatggagc aggccgagat cgccgggccc gaggacgaga
     1321 tcgtgcgttt cctgcgcacc atgcgcgagg cgtgcgaggc gctgcccact gcccgcatca
     1381 tctgacgcaa attttaaggg atttcgtcgg cgaagcgcga cgccggaagc ggcgttgagc
     1441 ggggcactcg cctcaccgtt tctcgcgctg gacttgcgca gcgctggtag gctgatccgt
     1501 cttggcccca gaaagccgct tccgccgtgc cgttcgtggg ggaccgctac gccaggctcc
     1561 aaacggcggc ccggcgatca tcgcggcgag actggccagg tggcgtgttc atagcctccc
     1621 tcctgctccg gtaggagcac gcgccgcctc ggcgacgcat gccgcgtcgt cggcgcgaca
     1681 tgcggtgatg ctgagcccgg cgtcccggcg tgtcaagcga acctgtttac gtttttcgct
     1741 cggcgatcgc gccggtgtct cggcgcgcgg tgagcgcagc gccacctgcg cgctcgcgtc
     1801 gcacgcagga gcgcgcgt
//
LOCUS       DATAIQ010000907         1730 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_253589, whole genome shotgun sequence.
ACCESSION   DATAIQ010000907 DATAIQ010000000
VERSION     DATAIQ010000907.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1730)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1730)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1730
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_253589"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..511
                     /locus_tag="VHN20_14920"
     CDS             <1..511
                     /locus_tag="VHN20_14920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012706269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HEX2727109.1"
                     /translation="QTEVWRGLRGASSLQAQCGKIVIAVSEDIDPGNTDAIFWSLAYR
                     SNPVEDVQVAPYKSGGHGPKSGAGADSMLLIDATLKHPTSPLALPARPYMENARRIWD
                     ELGLPRLSVQAPWHGYELGDWSPQWQEFADNAAKGEWEANGTNTYARRQGGLKPETPV
                     RNVEGKKTQ"
     gene            526..1560
                     /locus_tag="VHN20_14925"
     CDS             526..1560
                     /locus_tag="VHN20_14925"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEX2727110.1"
                     /translation="MKATRRILLATPLLASLVGLAGTLPVPAQTPEQFYKGKTIRIML
                     GHPPGGSYDLYARLAADFMGKYIPGHPNIIVEHKPGGGGVVATAFFYAQSPKDGTVMG
                     LFPETIAHTQLLEPEVGKWKVQEMSYVGSFASVNPAFVVRKGAAAKTPEEMRKTSIVA
                     GCTGKNSQSYQFPAMLNALGGFKFKIVCGYKGSADSTLAMERGEVDLVSSAWNSWRAA
                     HRGPIGTGELIPVIQGGLKRNRELANVPLMQELVEDPKARQVLEFASAGASIGRALIV
                     PPGVPADRLAALRAAFDKVVQDPEFIASAEKRGAELDPTPGAEVDKFRDKIMGAPQDL
                     IEAADKAMGG"
     gene            1570..>1730
                     /locus_tag="VHN20_14930"
     CDS             1570..>1730
                     /locus_tag="VHN20_14930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014494194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HEX2727111.1"
                     /translation="MATVSLTVNGRPVTAEVEGRTLLVKLLREHLRLTGTHVGCDTTQ
                     CGACTVLLNG"
BASE COUNT          306 a          588 c          576 g          260 t
ORIGIN      
        1 gcagacggaa gtgtggcgcg ggttgcgcgg tgcgtcctcg ctgcaggcgc aatgcggcaa
       61 gatcgtcatc gccgtgtccg aggatatcga tccgggcaat accgacgcca tcttctggtc
      121 gctggcctac cgctccaacc cggtcgagga cgtgcaggtt gcgccttaca agtcgggcgg
      181 ccacgggccc aaatcaggcg ccggcgccga ctcgatgctg ctcatcgacg ccaccctcaa
      241 gcatcccacg tctccgctcg ccttgccggc gcgcccgtat atggagaacg cgcgcaggat
      301 atgggacgag ctgggcctgc cgcgcctgag cgtgcaggcg ccgtggcacg gctacgaact
      361 tggcgactgg agcccgcaat ggcaggaatt cgccgacaat gccgccaagg gtgaatggga
      421 ggcgaacggg accaacacct acgcgcgccg ccagggtggc ctgaagcctg agacgccggt
      481 gcgcaacgtc gaaggcaaga aaacccagtg acacggagga acacagtgaa agccacacgc
      541 cggattttgc tggcgacgcc gctcctggcc tcgctggtcg ggctcgccgg cacgctgccg
      601 gtccccgccc agacccccga gcagttctac aagggcaaga ccatcaggat catgctcggc
      661 cacccgccgg gcggctccta cgatctttat gcgcgcctcg cggccgactt catgggcaaa
      721 tacatcccgg gccatcccaa catcatcgtc gagcacaagc ccggcggcgg cggggtggtc
      781 gccacggcct tcttctacgc gcagtcgcca aaggacggca ccgtgatggg cctcttcccc
      841 gagaccatcg cgcataccca gctcctcgag ccggaggtgg gcaagtggaa ggtgcaggag
      901 atgtcctatg tcggctcgtt cgcgtctgtg aacccggcct tcgtcgtgcg caaaggcgcg
      961 gcggcgaaga cgcccgagga gatgcgcaag acctcgatcg tggcaggctg cacgggcaag
     1021 aactcgcaaa gctaccagtt cccggcgatg ctcaacgccc tcggcggatt caagttcaag
     1081 atcgtatgcg gctacaaggg ctcggccgac tcgaccctcg ccatggagcg cggcgaggtt
     1141 gatctcgtct cgtccgcctg gaattcatgg cgcgcggcgc accgcggccc gatcgggact
     1201 ggtgagctga tcccggtgat ccagggcggg ctcaagcgca accgcgagct cgccaacgtg
     1261 cccctgatgc aggagctcgt ggaggatccc aaggccaggc aggttctgga attcgcctcg
     1321 gcgggcgcct cgatcggacg ggcgctgatc gtcccgcccg gcgtccccgc cgaccgtctg
     1381 gcggcgttgc gcgccgcctt cgacaaggtc gtgcaggatc cggagttcat cgcctccgcc
     1441 gagaagcgcg gcgccgagct cgaccccacg cccggcgcgg aggtggacaa gtttcgcgac
     1501 aagatcatgg gcgcgcccca ggatctgatc gaggcggccg acaaggccat gggcggctga
     1561 cggattccga tggcgaccgt ttcactcacc gtcaacggca ggcccgtcac ggccgaggtc
     1621 gagggccgca cgcttctggt caagctgctg cgcgagcatc tgcggctgac cgggacccat
     1681 gtcggctgcg acaccaccca atgcggcgcc tgcacggtgc tgctcaacgg
//
LOCUS       DATAIQ010000908         8523 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_253633, whole genome shotgun sequence.
ACCESSION   DATAIQ010000908 DATAIQ010000000
VERSION     DATAIQ010000908.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 8523)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8523)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8523
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_253633"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1308
                     /gene="deoA"
                     /locus_tag="VHN20_14935"
     CDS             <1..1308
                     /gene="deoA"
                     /locus_tag="VHN20_14935"
                     /EC_number="2.4.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020093832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009032 - thymidine phosphorylase activity
                     [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine phosphorylase"
                     /protein_id="HEX2727112.1"
                     /translation="QEIIRRKRDGETLPPDDIETFIAGLTNASVSEGQAAAFAMAVFF
                     RGLSLGERVALTRAMTRSGAVLAWDLPGLALDKHSTGGIGDSVSLALAPAVAACGGYV
                     PMISGRGLGHTGGTLDKLDAIPGYVTQPDTAAFQRVVRDIGCAIIGQTAELAPADKRL
                     YAIRDVTATVESVDLITASILSKKLAAGLDGLVMDVKVGSGAFMSDVHSARALADSLV
                     TVANGAGLAATALLTDMDQPLASAAGNAVEVAYVAEYLTGARREPRFHQVTVALAAEM
                     LVLGRIAPGRAEARTRIEQAIATGAAAEQFSKMVAALGGPSDLLDDAERHLARAPVVK
                     AVQADAAGFVRTIATRDIGIAVVALGGGRTRPQDAIDHAVGFTGLAGLGDRVDAERPL
                     GFVHARTEEQAEAAALALRRTYQIGDHAPVGMPLIIDRIGGGP"
     gene            1305..2249
                     /locus_tag="VHN20_14940"
     CDS             1305..2249
                     /locus_tag="VHN20_14940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009494567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyoxylate/hydroxypyruvate reductase A"
                     /protein_id="HEX2727113.1"
                     /translation="MSLLVAMKDWETSRWVARFHTFLPHRRIVTLDEPFDRREVHYVA
                     SWKHPPGSLAGLPNLAAIFSLGAGVDHVMSDPRLPDVPIVRVVDADLTQRMSEYVVLH
                     CLMHLRQTRLYAAQQREGVWRDDRDQPAAGDVRVGIMGLGVLGGDAARKLKAIGFDVA
                     GWSRSRKSLEGIATFAGEEGLEQFLARTDILVSLLPLTDVTRGILNKRLFAKLAQDGR
                     LGGAVLINAGRGGLQVEADILRALDDGTLKAVTLDVFETEPLPAGSPLWRHPAVTITP
                     HNAAISEPNAICARIADQIRRLEAGEPLDNLVDREVGY"
     gene            complement(2340..3212)
                     /locus_tag="VHN20_14945"
     CDS             complement(2340..3212)
                     /locus_tag="VHN20_14945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019906244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NlpC/P60 family protein"
                     /protein_id="HEX2727114.1"
                     /translation="MNFDRRLTPARADLADERLRGQIAADRYSTGAPMRVVAPSAPLR
                     RHPASDAPLDTEVLMGEALTIYDEHEGWAWGQLKDDGYVGYVPSEALRADAPAPTHRV
                     ATLRTFVYPGANLKLPPGAWLSLGAAVAVEGTEGDFCRLSGGGFVFTGHLGPLASHEA
                     DFVAVAERFSGTPYLWGGKTSLGLDCSGLIQLSLAAAGIAAPRDTDMQERALGTPVEA
                     RSDLGGLRRGDLIFWQGHVGVMLDTERLLHANGYHMMVTVEPLQSVEERIRRKEFGPI
                     VSIKRLPPTVSSRP"
     gene            complement(3209..3559)
                     /locus_tag="VHN20_14950"
     CDS             complement(3209..3559)
                     /locus_tag="VHN20_14950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019963398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family winged helix-turn-helix
                     transcriptional regulator"
                     /protein_id="HEX2727115.1"
                     /translation="MPVELRPLQALKLWHDVHLDLVRGGEHDLSARQVAILLTIYLEM
                     PPHTVRGLAKKLGVTKPVITRALDTMGKLELVARRRDEADRRNVIIQRTVHGALAVER
                     LGDAVAARARELPR"
     gene            3700..3870
                     /locus_tag="VHN20_14955"
     CDS             3700..3870
                     /locus_tag="VHN20_14955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727116.1"
                     /translation="MCHDRSWFIAQDRKADDRKAKDRRNETVGALLRDSNEQAQKSRA
                     EPAPAKAPAPAK"
     gene            4098..5213
                     /locus_tag="VHN20_14960"
     CDS             4098..5213
                     /locus_tag="VHN20_14960"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HWE histidine kinase domain-containing protein"
                     /protein_id="HEX2727117.1"
                     /translation="MDTPNYNFLEAAFEKAVVKGGPEHGKIQDDAQRDATPDILRERE
                     HQFHQLLDALPAAVYTTDAAGRITYYNDAAAELWGHRPDLGTVAWCGAWKFFRPDGTP
                     LPHDACPMAMALKEDRPIRGMEAIIERPDGIRVPFLPYPTPLHDQSGALVGAVNMLLD
                     ISEKKRAEEHHALLIRELHHRVKNTLATVQAIMSSTARTASSIAEFEEKFIGRVGSLS
                     RTHSLLTEDVRQTTRFGDLLRNELDAFDDGSQRIRLKGPFVELSSDLAVPIGMAIHEL
                     ATNAARHGSLSVPDGRLEVRWSVSIEAEGSKLLFQWLEQDGPPLEKPRRPGFGTRLLE
                     RVLTSQVSAEVAIGFEGSGIRINVAVPLPNAPTPASG"
     gene            complement(5210..6601)
                     /locus_tag="VHN20_14965"
     CDS             complement(5210..6601)
                     /locus_tag="VHN20_14965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009494569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase family protein"
                     /protein_id="HEX2727118.1"
                     /translation="MIHPLLALETETARPIWLVNEDSWHGVRNDLPAMARSFADAQGF
                     EPKPGRHCLLPDSDGSLLGVLMGVDGAQVKRVDPFLPGQLSTALPEGVYRFATPPADP
                     ALATLAWLLGGYAFTRYGKKPGKPARLVPSHGVDAAEVAAIAEAVTMGRDLINTPAND
                     LGPDGLEAAARRLANKHGADIEVIVGDDLLKQNFPMIHAVGRASATPPRLIDIRWGRA
                     DAPRVTVVGKGVTFDTGGVNVKPESAMLLMKKDMGGAAAALALADMVIGADLPVRLRV
                     LVPAVENMISGASFRPGDVLPSRKGLTVEIGNTDAEGRLILADALALADEEEPEIVID
                     YATLTGAARVALGPDLPPFYTEDDALAADLARLGEAVNDPVWRLPLWPPYAALLDSRI
                     ADTNHISGGPFAGSITAALFLRRFATAAKAHVHFDVYAWNPKARPARPEGGEVQGARL
                     VYALLKERYVRTS"
     gene            6896..7897
                     /locus_tag="VHN20_14970"
     CDS             6896..7897
                     /locus_tag="VHN20_14970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012254302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDC27 family protein"
                     /protein_id="HEX2727119.1"
                     /translation="MAYPVIAFLVRPPRFWRRLALAGLLALPSAGCLTRAKSNIGASG
                     GPAPSQEEWRRSAQAWGPRFEANPADAQAAIYYARALRATEQRAQAVAVLQQAAIRNP
                     NHLELLAAYGKALGDVGRYKEANEVLGRAHTPERPDWRILSAQGAIADQIGDHVAAQR
                     YYDSALKIAPGEPSVLSNLGLSYALSKRLHDAEEALKQAADHPAADMRVRQNLALVLG
                     LQGKFQEAEEVLRRDLPATEVADNMTALRRMVAQPNTLAAIRGGEPRITQTAAAHGRA
                     EPAKAAAQKPPLEKPAAQKTAEQKTPAQAAAGQNTRAQTAEGQKTTSQGSRLELRRF"
     gene            complement(8315..>8523)
                     /locus_tag="VHN20_14975"
     CDS             complement(8315..>8523)
                     /locus_tag="VHN20_14975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010687405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HEX2727120.1"
                     /translation="IQAERYGTPLGQALRVLSQESRDQRMAEAEKKAAGLPPKLTVPM
                     ILFFLPVLFVVIMTPALIQVFGWK"
BASE COUNT         1433 a         2945 c         2839 g         1306 t
ORIGIN      
        1 caagagatca tccgccgcaa acgcgatggc gagacactgc cgccggacga catcgaaacc
       61 ttcattgccg gcctcacgaa cgccagcgtc tcggagggac aggccgccgc cttcgccatg
      121 gcggtgttct tccgcgggct gtcgctcggc gagcgcgttg ccctcacccg cgcgatgacc
      181 cggtccggcg cggtgctcgc ctgggacctg ccaggactgg cgctcgacaa gcattcgacc
      241 ggtggcatcg gcgatagcgt cagcctggcc ctggcgccgg ccgtggcggc ctgcggcggc
      301 tacgtgccga tgatctccgg ccgcggcctc ggacataccg gcgggacgct cgacaagctc
      361 gacgcgatac ccggctacgt cacgcagccc gataccgccg cgttccagcg cgtggtgcgc
      421 gacatcggct gcgccatcat cgggcagacg gccgagctcg cgcccgccga taaacggctc
      481 tatgccatcc gtgacgtgac cgcgacggtc gagtcggtcg acctgatcac ggcttcgatc
      541 ctctcgaaaa agctcgcggc cgggctcgac gggctcgtca tggacgtcaa ggtcggctcc
      601 ggcgctttca tgagcgacgt tcacagcgcg cgcgcattgg ccgacagtct cgtgacggtc
      661 gccaacggcg ctggcctcgc ggcgacggcg ctgctcaccg acatggatca gccgctcgcc
      721 tcggcggccg gcaacgcggt cgaggtcgcc tacgtggccg aatacctgac cggcgcgcgg
      781 cgcgaaccgc gcttccatca ggtcaccgtc gcgctcgccg ccgagatgct cgtgctggga
      841 agaatcgctc ccggtcgcgc cgaggcccgg acccgaatcg agcaggcgat cgcgaccggc
      901 gctgcggccg agcaattctc gaagatggtc gccgccctcg gcggcccttc cgacctcctc
      961 gatgacgccg agcggcatct cgcccgggcg cctgttgtga aagctgtgca agccgatgcc
     1021 gccggcttcg tccgcacgat cgcgacgcgc gacatcggca tcgccgtggt ggcgctcggg
     1081 ggcggacgca cgcggccgca agatgcgatc gatcacgccg tcggattcac cggccttgcc
     1141 ggccttggcg atagggtcga tgccgaacgg ccgctcggct tcgtgcatgc aagaaccgaa
     1201 gagcaggccg aggccgcggc gctcgccttg cggcgcacct accagatcgg cgatcacgcc
     1261 cccgtcggaa tgccgctcat cattgaccgc atcggaggcg gaccatgagc cttctcgtcg
     1321 ccatgaagga ttgggagacc agccgctggg tggcgcgttt ccataccttc ctgccgcatc
     1381 gcaggatcgt cacgctcgac gagccgttcg accggcgcga ggttcactac gtcgcctcat
     1441 ggaagcaccc gcccggcagc ctcgccgggc tgccgaacct cgccgcgatc ttctcgctcg
     1501 gggccggcgt cgaccatgtg atgagcgatc cgcgcctgcc cgacgtgccg atcgtgcggg
     1561 tcgtcgatgc ggacctcacc cagcggatga gcgaatacgt cgtgctgcat tgcctgatgc
     1621 atctgcgtca gacgcggctt tatgcagcgc agcaacggga aggcgtctgg cgcgacgatc
     1681 gcgatcagcc ggccgcgggt gacgtccggg tcggcatcat gggccttggc gttctcggtg
     1741 gcgatgcggc gcgcaagctc aaggcgatcg gcttcgacgt cgccggctgg agccgctcgc
     1801 gcaagtcgct cgaaggcatt gccaccttcg caggtgaaga ggggctcgag cagttcctgg
     1861 cccgcaccga cattctggtc tcgctgctgc ctctgaccga cgtgacccgc gggatcctca
     1921 acaaacgatt gttcgcgaag ctggcgcagg acgggcggct cggcggggcg gtgctgatca
     1981 atgccggccg cggcgggctg caggtcgagg ccgatatctt gcgtgcgctc gacgacggca
     2041 cgctcaaggc ggtgacgctc gacgtgttcg agacggagcc cctgcccgcg ggctcgccgc
     2101 tctggcgaca tccggcggtg acgatcactc cgcacaacgc cgccatcagt gagcctaatg
     2161 cgatctgcgc ccgtatcgcc gaccagatcc gccgcttgga agcgggtgaa ccgctggaca
     2221 acctggtcga tcgcgaagtg gggtattgag atcaccccga cggcgggcaa cagcgatccg
     2281 cggcttcctc agcgcagcgg cacggttcat cgccagagcg atcccggctc tccgcttcgc
     2341 tacggccggg atgacacggt cggcggcagg cgcttgatcg atacgatcgg gccgaattcc
     2401 ttgcgccgga tgcgctcttc caccgactgc aggggctcga ccgtgaccat catatggtag
     2461 ccgttggcgt ggagcaggcg ttcggtatcg agcatgacgc cgacatgccc ctgccagaag
     2521 atcaggtcgc cgcggcgcag gcctccgagg tcagacctgg cctcgaccgg cgtgccgagc
     2581 gcccgttcct gcatgtcggt gtcgcgcggc gccgcaatgc cggccgccgc cagggacagc
     2641 tggatcagcc cggagcaatc gagccccagg ctggtcttgc cgccccatag atacggcgtg
     2701 cccgaaaacc gttccgccac ggcgacgaaa tccgcctcgt gtgatgcgag gggtccgaga
     2761 tggccggtga agacgaagcc gccgcccgac agacggcaga aatctccttc cgtcccttcg
     2821 accgcgacgg ctgcgccaag gctcagccag gcgcccggcg gcaacttgag gtttgcgccc
     2881 gggtagacga acgtcctgag cgtcgcgacc cggtgcgtcg gcgccggagc atccgcgcgc
     2941 aacgcctcgc tcggaacata gccgacatag ccgtcatcct tgagctggcc ccacgcccag
     3001 ccttcgtgct cgtcatagat cgtgagtgcc tcgcccatca gcacctcggt gtcgagcggc
     3061 gcatcggacg cgggatggcg gcgcaacggc gcggatggcg cgaccacgcg catcggcgcg
     3121 cccgtgctgt agcgatcggc ggcgatctgc ccgcgcaatc tttcgtcggc aagatcggcg
     3181 cgggcaggtg tcaggcgcct gtcgaaattc atcgcggcag ctccctggct cgtgcggcca
     3241 cggcgtcccc gaggcgctcg acggcgagcg cgccatggac cgtgcgctgg atgatcacgt
     3301 tgcggcggtc ggcctcgtcg cggcgcctcg cgaccagctc gagcttgccc atggtgtcga
     3361 gtgcgcgcgt gatcaccggt ttggtcactc cgagtttctt cgccaggccg cggaccgtgt
     3421 gcggcggcat ctcaagataa atcgtcagaa ggatggcgac ctggcgcgcc gacaggtcgt
     3481 gctcgccgcc gcggacgagg tcgagatgca cgtcgtgcca cagcttcaag gcttgcagag
     3541 gccgcagctc gaccggcatc gcgcaaatcc ttcgtttcgg ctccgtatta ttcgccgcgg
     3601 gtgaaggaag tgcaaatcgg cccgcaatgc cgctcagagt ggggcggaac gatccggtcc
     3661 gcgatgcgtt gcttatgccg gcatgaacgg aggcccgtca tgtgccacga cagaagctgg
     3721 ttcatcgcac aggacaggaa ggcggacgac cgcaaggcga aggacaggcg caacgagacc
     3781 gttggcgcgc tgctgcgtga ttccaacgag caggcgcaaa aatccagagc cgaacctgcg
     3841 cccgccaagg cgcctgcccc ggcgaaatag ctccccaatt cgcggtgcgg gggccggctc
     3901 gcatggtgcc ggcgggggtg attggcgcgc cctggcaaca ccgacgcgtt gccgtgaggg
     3961 caggccgctc ggatcgtctt gccgctcccg gtcaaagccg ccatagtgcc gccactgcca
     4021 tccggccgct gagttgagca cgtgcgcgct ccggatggac ccggggtggg gctcgtcgca
     4081 acgcgtcgcg gatttcgatg gacacaccga attacaactt cctcgaagcg gcctttgaaa
     4141 aagcggttgt gaaaggcggc ccagaacacg gcaagattca ggacgacgcg cagcgcgatg
     4201 ccacgcccga catcctgcgc gaacgcgagc accagttcca ccagctgctc gacgccttgc
     4261 ctgccgcggt ctacaccacc gacgcggcag gccgcattac ctactacaac gatgcagccg
     4321 ccgagctttg gggccatcgt cccgatctcg gcacggtcgc ctggtgcggc gcctggaagt
     4381 tctttcgacc ggacggcacg ccgctcccgc acgatgcctg ccccatggcc atggcgctca
     4441 aggaagaccg gccaatcagg ggcatggagg cgatcatcga acggccggac gggatccgcg
     4501 ttcccttcct gccctacccg acgccgctgc acgatcaatc cggcgcactg gtgggggccg
     4561 tgaacatgct cctcgacatc agcgagaaaa aacgcgccga ggagcatcac gcgctgctca
     4621 tccgcgagtt gcatcatcgc gtcaagaaca cgttggcaac ggttcaggca atcatgagct
     4681 cgaccgcccg caccgcgtcg agcatcgcgg aattcgagga gaaattcatc ggtcgggtgg
     4741 ggtcgctgtc gcgaacccac tcgctcctga ccgaagatgt gcgccagacg acccgcttcg
     4801 gcgacctgtt gcgcaacgag ctcgatgcct tcgacgacgg cagccagcgt atccgcctca
     4861 agggcccgtt tgtcgagctc tcgtccgacc tcgccgtgcc gatcggcatg gcgatccacg
     4921 agctggccac caacgcggcg agacacggat cattgtcggt gccagacggc cggctcgagg
     4981 tgaggtggag cgtcagcatc gaggccgagg gcagcaagct cctgttccag tggctcgaac
     5041 aggacggccc tcccctcgag aagccgaggc ggcccggctt cggcacgcgt ctgctcgagc
     5101 gcgttctcac ctcgcaggtg tccgccgagg tggcgatcgg cttcgagggc agcggcattc
     5161 gcatcaacgt tgccgtgccc ttgccgaacg cgccgacgcc tgcaagcggc taactcgtcc
     5221 tgacgtagcg ctccttgagc agcgcgtaga ccagccgcgc gccctgaacc tcgccgccct
     5281 ccggccgcgc cggccgggcc ttcggattcc acgcgtacac gtcgaaatgg acgtgcgcct
     5341 tggcggcggt ggcgaaacgg cgcaggaaca aggccgccgt gatcgaaccg gcgaaaggac
     5401 cgccagaaat gtgatttgta tcggctatcc tcgaatcgag cagagcagcg taaggcggcc
     5461 agagtggcag gcgccagacc ggatcgttca cggcctcgcc gaggcgcgcg agatcggctg
     5521 cgagcgcgtc gtcctcggta tagaacggcg gcagatcggg gccgagggcg acgcgggcgg
     5581 cgcccgtcag cgtcgcataa tcgatcacga tctccggctc ctcctcgtcg gccaacgcca
     5641 acgcgtcggc caggatgagc cgcccttccg catcagtgtt gccgatctcg accgtgagac
     5701 ccttgcggct cggcagcacg tcgccgggcc ggaacgacgc gccagagatc atgttctcga
     5761 ccgcgggcac gagcaccctc aggcgcaccg gaagatcggc gccgatcacc atgtcggcca
     5821 aggccagggc ggcggccgcc ccgcccatgt ccttcttcat cagcagcatg gcggattcgg
     5881 gcttcacgtt gaccccgccc gtgtcgaatg tgacgccctt gccgacaacg gtgacacgcg
     5941 gagcatccgc cctgccccag cgaatgtcga tcaaccgcgg cggcgttgcc gaagcgcgtc
     6001 cgacggcatg gatcatcggg aaattctgct tgaggagatc gtctccgacg atcacctcga
     6061 tgtcggcgcc gtgcttgttg gcgagacggc gcgccgccgc ctcgagaccg tccgggccga
     6121 ggtcgttggc aggcgtgttg atcaggtcac ggcccatggt caccgcctcc gcgatggcag
     6181 cgacttcggc agcatcgacg ccgtgagatg gaaccagccg cgccggcttg cccggcttct
     6241 tgccgtagcg cgtgaaggca tagcctccga ggagccaagc gagcgtcgcg agcgccgggt
     6301 cagccggagg tgtggcgaag cggtagacgc cctccggaag ggcggtcgac agctgtcccg
     6361 gcaggaacgg gtcgacgcgt ttcacctgcg cgccgtcgac gcccatgagg acgccgagga
     6421 gcgacccgtc gctgtcgggc aacaggcaat gccggcccgg cttcggctcg aagccctgcg
     6481 catcggcgaa gcttcgcgcc atcgccggga ggtcgttcct gacgccgtgc cagctgtcct
     6541 cgttgacgag ccagatcggt cgagcggtct cagtctcaag agcgagcagc ggatggatca
     6601 tcggacggtc ggaacgagaa attcggaccg ttgctcttta gaacaggatg cgccggcgtg
     6661 gataccactt cgccgaaaaa aggagcttcc cgggcaggat ccgggttcat gcggcgcaga
     6721 gaagtcccgc gagatcaatt tggaggctcg ccgcggccga tgcgccagcc gaggatcgag
     6781 aaggtttgtc gaagcccggg acgcgcataa ccaccgcgag gcgccgctta agggttcatt
     6841 aaagttaacg aattacgcac gacgacagtg cggctggtac agctggagct cgtcgatggc
     6901 gtaccccgtg attgccttcc ttgttcgccc tccgcggttc tggcggcgac tcgccctggc
     6961 tggcctgctc gccctgccga gcgccggctg cctgacacgc gcgaagagca acatcggcgc
     7021 ctcgggcggc cctgctccct cgcaagagga atggcgccgc tcggcgcaag catggggtcc
     7081 gcgcttcgag gccaatcccg cagacgccca ggcagccatc tactacgcgc gtgccctgcg
     7141 cgcgaccgag cagcgggccc aggccgtcgc cgtgctgcag caggcggcga tccgcaatcc
     7201 gaaccacctc gaactgctcg ccgcctacgg caaggcgctg ggcgacgtcg gccgctacaa
     7261 ggaagcaaat gaggtgctgg gccgcgccca cacgcccgag cggccggatt ggcgcattct
     7321 ctcggcgcag ggcgccatcg ccgaccagat cggcgatcac gtcgcggcgc aacgctatta
     7381 cgactcggcg ctcaagatcg cgcccggcga gcccagcgtc ctgtccaatc tggggctctc
     7441 ctacgccctg tccaagcgtc tccacgacgc cgaagaggcg ctgaagcagg cggccgatca
     7501 tccagccgcc gacatgcgcg tgcgtcagaa ccttgccctt gtcctgggcc ttcaaggcaa
     7561 gttccaggag gcagaggaag tgctccgtcg ggacctgccg gcaaccgaag tggcggacaa
     7621 catgaccgcg ctgcgccgca tggttgccca gcccaacacc ctcgctgcca tccgcggcgg
     7681 cgagccgcgc atcacccaga ctgccgcggc ccacggcagg gccgagccgg ccaaagccgc
     7741 tgcgcagaaa ccgccgctcg agaaaccggc cgcgcaaaaa accgcggagc agaagacgcc
     7801 ggcacaggca gccgcgggtc agaacacgcg ggcacagacg gccgagggcc agaagaccac
     7861 ctcgcaggga agccgcctcg agctccgccg cttctgaggg cggcgctggc agatctcctc
     7921 aactgagctg gtgtccggca gatcctccgc gcgcaccgat tgatcccgaa gcggggcccc
     7981 gcgcctcttc tcttggatcg ggcgacccgc cgcccgactg tccggcgtgt tagcgagcgg
     8041 gtcacatgcg gagcggggcc gcttcatgtt cagctcttcc ctcctcggtg cggtcacaga
     8101 cctcggcccg gtgccggctc gctctggccc gaagatgcgg tgagatggcc tcggccgacg
     8161 ccaagcgaag gggcgcgtgg catcgacgca cgctgctgcg tgccggcctg cggcggcggc
     8221 gatccggcgg cgatgcccat ccgcgttgat gtacgcgcta cgcggccgct ccttgacgcc
     8281 gccggcgggc gccctaacgc cctccgggcc agacttactt ccagccaaag acctggatca
     8341 gggccggagt catgatcacc acgaagagca ccggcaggaa gaacaggatc atgggaacgg
     8401 tcagcttcgg cggcagccct gcggcctttt tctccgcctc ggccatgcgc tggtcacgac
     8461 tctcttgaga tagcacgcgc aacgcctgcc ccagaggcgt gccgtagcgc tcggcctgga
     8521 tca
//
LOCUS       DATAIQ010000909         1551 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_253670, whole genome shotgun sequence.
ACCESSION   DATAIQ010000909 DATAIQ010000000
VERSION     DATAIQ010000909.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1551)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1551)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1551
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_253670"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1326
                     /locus_tag="VHN20_14980"
     CDS             <1..1326
                     /locus_tag="VHN20_14980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009762944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX2727121.1"
                     /translation="ADAGAVTLEYRWRCADEIERHFFDQAVLIRDEDGAPREVFGIWF
                     DITERKQLEQNLLHASKLEAVGRLTGGIAHDFNNMLSVVIGNLDLLRKTVDGDAKASR
                     RVRLAMDGAQRCADLTNRLLAFSRRQPLQASILDLQEIMPNMVELLRRTLGERISIEL
                     EMSSGIWPVRVDRSQLESALVNLAVNARDAMPDGGRLILQVRNRHLSDEAAPQVAGID
                     QDCVAISVVDTGTGMPPAVLQRVFEPFFTTKESGKGTGLGLSMVYGFVQQSGGQIELD
                     SAPGEGTTIRIFLPRTEPAEGVQPAARDDSVTPTFAQGQTVLVVEDDANVRQVTVSTL
                     ESLGFAVKEARTGDEAAAMLNDNSDVQIVLSDVKMPGMTGIELARLVKQQWPAINILL
                     TSGYVEADDRVQEFEFIHKPYRTADLAQKLQAMLGMAAQQPERRLRAVH"
     gene            complement(1348..>1551)
                     /locus_tag="VHN20_14985"
     CDS             complement(1348..>1551)
                     /locus_tag="VHN20_14985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018044415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727122.1"
                     /translation="LRGRLSGLCQPAYVLDIPGGHGKSPIGPAYLAPTEAGRDEATYV
                     IEDYNGQRHAYPPAGQADAPDEA"
BASE COUNT          269 a          519 c          521 g          242 t
ORIGIN      
        1 gccgatgcag gcgccgtcac gctcgaatat cgctggcgct gcgccgacga gatcgagcgc
       61 catttcttcg atcaggcggt gctgatccgc gacgaagacg gagcgccgcg cgaggttttc
      121 gggatctggt tcgacatcac cgagcgcaag cagctcgagc agaacctgct tcatgccagc
      181 aagctcgagg cggtcggccg cctgacgggc ggcatcgcgc acgacttcaa caacatgctg
      241 agcgtggtca tcggcaacct cgacctgctc aggaagacgg tcgacggcga cgccaaggct
      301 tcgcggcggg tgcgtctggc gatggacggg gcgcaacgct gcgccgacct gaccaaccgg
      361 ctgctcgcat tctcacgccg gcagccgctg caggccagca tcctcgatct tcaggagatc
      421 atgccgaaca tggtcgagct gctgcgccgc acgctcggcg agcggatcag catcgagctg
      481 gagatgagtt ccggtatctg gccggtgagg gtcgaccgct cgcagcttga atcggcgctc
      541 gtcaatcttg ccgtgaatgc gcgcgacgcc atgcccgacg gcggtcgcct gatcctccag
      601 gtgcgcaacc gccatttgtc ggatgaggcc gctccgcagg tggccggcat cgaccaagat
      661 tgcgtcgcca tctctgtcgt cgataccggg accggcatgc cgccggccgt gctgcaacgc
      721 gttttcgagc cgttcttcac caccaaggaa agcggcaagg ggaccggcct cggcctgagc
      781 atggtctacg gttttgtgca acagtcgggc ggccagatcg aactcgacag cgcgcccggc
      841 gaaggcacca cgatccgcat cttcctgccg cgcacggaac ccgccgaggg tgtgcagccg
      901 gccgcgcgcg acgacagcgt gacgccgacc ttcgcgcagg ggcagaccgt cctcgtggtg
      961 gaggacgacg ccaacgtgcg ccaggtgacc gtgtcgacgc tcgaatcgct cggcttcgcg
     1021 gtcaaggagg cgcgcaccgg cgacgaggcc gccgccatgc tcaacgacaa cagcgatgtt
     1081 cagatcgtcc tgagcgacgt caagatgccc ggtatgacgg gcatcgagct ggcgcggctg
     1141 gtcaagcagc aatggccggc gatcaacatc ctgctgacct ccggctacgt cgaggcggac
     1201 gaccgcgtcc aggaattcga gttcatccac aagccctacc gcaccgccga cctggcgcag
     1261 aagctgcagg ccatgctggg catggcggcg caacaacccg agagacgcct gcgcgccgtg
     1321 cattgaggcg cgggcctccc acaagcttca ggcttcgtcc ggcgcgtccg cctggcctgc
     1381 gggcggatag gcgtggcgct gtccgttgta atcctcgatc acatacgttg cctcgtcgcg
     1441 gccggcctcc gtaggcgcga gatatgcggg tccgatcggc gacttgccgt gcccgcccgg
     1501 gatgtcgagg acgtaggcag gctggcacag gccggacagg cgcccgcgca g
//
LOCUS       DATAIQ010000910         1979 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_253715, whole genome shotgun sequence.
ACCESSION   DATAIQ010000910 DATAIQ010000000
VERSION     DATAIQ010000910.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1979)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1979)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1979
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_253715"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..492
                     /locus_tag="VHN20_14990"
     CDS             <1..492
                     /locus_tag="VHN20_14990"
                     /inference="COORDINATES: protein motif:HMM:NF026018.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid II flippase MurJ"
                     /protein_id="HEX2727123.1"
                     /translation="ILVTGLPAYVLVKVLTPAFYARKDVKTPVVIAMTVLALGILANF
                     ALIPLIGIYSLATVTSASAWINFALLFAILWWRGHFRMPGWLVGRVARQLAAAAAMAA
                     ALYGVKLAAGDLFFGDIAERAIGLAALVGTGGLVYFAVAWIIGGIDKEAIATLIRRKK
                     VSQ"
     gene            489..1505
                     /gene="trpS"
                     /locus_tag="VHN20_14995"
     CDS             489..1505
                     /gene="trpS"
                     /locus_tag="VHN20_14995"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013168740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004830 - tryptophan-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006436 - tryptophanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HEX2727124.1"
                     /translation="MSAQGPAMRVVSGIQPTGGLHLGNLLGAILRWVRMQDEAECLFF
                     LADLHAITVDVDPAVLRANVREMAAALIASGIDPAKSTLFAQSAVPQHAELAWILQCT
                     ARVGWLNRMTQFKDKSGKNKEGASVGLYTYPVLQAADVLLYRATHVPVGEDQKQHIEL
                     ARDIAVKFDTDFETELFVPPEPFIGGGAAARVMSLRDGSAKMSKSDPSDQSRINLTDS
                     DDAIAQKIRKARTDPDPLPDDPALLEGRPEAKNLVGIMAAIQDRSVEAVLADFAGQGF
                     GAFKPALADALIALIAPLRSRADELRSDPAELDRILAAGAGRARALAAPTLAEAYRVV
                     GLTC"
     gene            1590..>1979
                     /locus_tag="VHN20_15000"
     CDS             1590..>1979
                     /locus_tag="VHN20_15000"
                     /inference="COORDINATES: protein motif:HMM:NF024978.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4136 domain-containing protein"
                     /protein_id="HEX2727125.1"
                     /translation="MRINKLAAAALLSISALGLTACATGFPAQVQRYQAMPAPQGQTF
                     FIVPADATHGGLEFQRYGGQVAQALQARGYAPAASPETATMLVRLAYGVDEGRQEVRR
                     DPFARGYGYDPFWSGWHDPFYRGYYGRP"
BASE COUNT          301 a          731 c          615 g          332 t
ORIGIN      
        1 atcctcgtca ccggccttcc cgcctacgtg ctggtcaagg tgctgacccc cgccttctac
       61 gcgcgcaagg acgtcaagac gccggtcgtc atcgcaatga ccgtgctggc gctcggcatc
      121 ctcgccaatt tcgctctaat cccgctcatc ggcatctaca gcctggcgac cgtcacctcg
      181 gccagcgcct ggatcaactt cgcgcttttg ttcgccatcc tatggtggcg cggtcatttc
      241 cggatgccgg gctggctcgt cggccgggtc gcgcgccagc tcgccgccgc cgccgcgatg
      301 gcggccgcgc tctacggcgt gaagctcgct gccggcgacc tgttcttcgg tgacatcgcc
      361 gagcgggcga tcggccttgc cgcgctcgtc ggcaccggcg gcctggtcta tttcgccgtc
      421 gcctggatta ttggcgggat cgacaaggag gccatcgcca ccctgattcg tcgaaagaag
      481 gtcagccaat gagcgcccaa gggcccgcga tgcgagtcgt ctccgggatc cagccaaccg
      541 gcgggctcca tctcggcaac ctcctcggcg cgatcctgcg ctgggtgagg atgcaggacg
      601 aggccgaatg cctgttcttc ctcgccgacc tccacgccat cacggtcgac gtcgaccccg
      661 ccgttctgcg cgccaacgtc cgcgagatgg cggcagcgct gatcgccagc gggatcgacc
      721 cggccaaatc gaccctgttc gcccagagcg cggtccccca gcacgccgag ctcgcctgga
      781 tcctgcagtg caccgcgcga gtcggctggc tcaaccgcat gactcaattc aaggacaaga
      841 gcggcaagaa caaggaaggc gcaagcgtcg gcctctacac ctatccggtg ctccaggcgg
      901 ccgacgtcct gctctaccgc gcgacccatg tcccggttgg cgaggaccag aagcagcata
      961 tcgagcttgc ccgcgacatc gcggtcaagt tcgacaccga tttcgagacc gagctgtttg
     1021 tcccgcccga gccattcatc ggcggcggcg ccgcggcgcg ggtgatgagc ctgcgcgacg
     1081 gcagcgccaa gatgagcaag tccgatccct cggaccagag ccggatcaac cttaccgaca
     1141 gcgacgatgc gatcgcccag aagattcgca aggcgcgcac cgatcccgac ccgctgcccg
     1201 acgacccggc gctgcttgag ggccggcccg aggcgaagaa cctcgtcggg atcatggccg
     1261 cgatccagga ccgctccgtc gaggcggtgc tcgccgactt cgccgggcag ggattcggcg
     1321 ccttcaagcc ggctttggcc gacgccctga tcgcgctgat cgcgccgctc cgcagccgcg
     1381 ccgacgagct ccgctccgat ccagccgagc tcgaccggat tctcgctgcg ggtgccgggc
     1441 gggcccgcgc gctggccgcg ccaaccctcg ccgaggccta ccgggtggtc ggcctaacct
     1501 gttgaaatag ctttcatcgc ccattcagca cgattcgtgg tataaaccgc gcgcttaatc
     1561 gcgattttgc tctgctgagg gtgggtttca tgcgtatcaa caagctggca gccgccgcgc
     1621 tgctttccat ttccgcgctc ggcctcacgg cctgcgccac cggctttcca gcccaggtcc
     1681 agcgctacca ggcgatgccg gcgccccagg gccagacctt cttcatcgtc ccggccgacg
     1741 ccacgcacgg cgggctcgag ttccaacgct acggcggcca ggtcgcccag gcgctccagg
     1801 cccggggcta cgctccggcc gcctcgcccg agaccgcgac catgctcgtt cggctcgcct
     1861 acggcgttga cgagggccgt caggaggtcc gccgcgaccc gttcgcgcgc ggttatggct
     1921 acgacccgtt ctggagcggc tggcacgacc cgttctaccg cggctattac ggccgtccc
//
LOCUS       DATAIQ010000911         6960 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_253815, whole genome shotgun sequence.
ACCESSION   DATAIQ010000911 DATAIQ010000000
VERSION     DATAIQ010000911.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 6960)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6960)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6960
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_253815"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1835)
                     /locus_tag="VHN20_15005"
     CDS             complement(<1..1835)
                     /locus_tag="VHN20_15005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727126.1"
                     /translation="MRKLRIMFYCTSEHEKAQAEKVSARLGDSVAPIMAGVPFGPSAI
                     AVAARGPRLAPTATDTWEWRLGVHIRRISRGLPLPVRIVAALPFLLAVVMVSFAQQVL
                     RRRPAGAMASRIASLMAFVLELDPAGRARARQIWRRCRFLTSRAALRHSARVLAWRLR
                     VAFARVRACIPAQRLLLGAIAPWVGKGRARRFVQRAKRRVRRMRRLPPYLSKPRRGRR
                     IMARRWVLAAATPWAGQWPARRYVHAARRVVRFPREARRWASNLSARPTRRRRPVRRR
                     VLALIVPWTGKWAARHYVRQVRDMNKLYRRHRPDWMTYFAQLREKWALKAQFTALLTE
                     EQPDALVIFEDNVGGWTRIIAGAAADRRIAYFVLPLTIPNPKEPAAFYRNQPSHIISG
                     ALARFVAARWPQWTYEYDGVAMLRLPAPEILSMHSLRLDPPQPWVLNTGSAEVICIES
                     EAMLRHYRALGFAEGQLAVTGSLVDDTLHAVRRTRPARREALLAPYGLDPGRPLFVVG
                     FPPDQFTSPDTSPFEFKSFDTLVQAWGEALAPALAHANVIVKPHPRLATWRLASLKAA
                     GLVVTSAPTEELVPLADVYIASISATIRWALGLGIPVVNYDCYRYR"
     gene            complement(1842..3755)
                     /locus_tag="VHN20_15010"
     CDS             complement(1842..3755)
                     /locus_tag="VHN20_15010"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2727127.1"
                     /translation="MDKVTTPQDQALTVRQPHAAARLLRRAGRTLAAARARVRGIYDV
                     VRKVIYLSREKTAFTITFIVASVVNALTDGFTVMLVVPLVDTLASDALFRGIPLLSDF
                     GGLFQGMDITQRLRWITLIVLLIVLLRGIMGYVVDLATYMIPLAIEQSLRNHALRLVM
                     AARMGFVDNLSTGEISNLTASFPIRVGIAARFLAQMVSSAITAILLLGLLVTITPMVL
                     AGLAAFTLVGSIIFKRLTGPLAISLGEELTRAQESYNQTFLQAIYNHRIVRVSDATDA
                     ILATIERLVNALRRTQMKSLAVQSATYPFFSTIGGLFVCSLMFGVTFTRTESAQAILG
                     ILVVFLVAMARLLGPLSVFHIARMHFVTHVDAVEKLYAFLKSAEAARDPDGSTELANF
                     QGRISFDHVSFAYDPGKPLLRDVSFATRPGEMVAVVGPSGSGKTTLFRLLTRIYRPGS
                     GSISVDGRRLDDLAIASFWKRLAYVSQDILIFRGTVRENMTFGRPDEFSDEQLRQAAR
                     MAAALPFIEALDHGFDTVIGDGGIALSGGEKQRIALSRAFLHDARLVLLDEATSQLDA
                     ITERQVQDTVAQLRARGCTILVIAHRLSTVRDADRILVLDNGQVVADGTHVALVGQKG
                     LYSEMVEKQTIRA"
     gene            4043..5113
                     /locus_tag="VHN20_15015"
     CDS             4043..5113
                     /locus_tag="VHN20_15015"
                     /inference="COORDINATES: protein motif:HMM:NF012695.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HEX2727128.1"
                     /translation="MRLFSDIAKICLDPQAPMREAVATIDRSGIKIALAVGPDGRLLG
                     TVTDGDVRRALLRGCDLDTPLDKIMSSHPKTAPASADPVALRERLVREEVLHLPLVDE
                     AGRVVDIAYLPALDLAQERHNRVVIMAGGLGTRLRPITEQIPKPMVEVGGRPLLQIII
                     ETFVKQGFGRFTIALNYLGEIIEEHFGDGSRFGAEIEYVRETKRLGTAGALSLMPERP
                     SEPFVVMNGDILTNIDFRALISFHEESSAAATMAVNSFRFQVPYGVVDLEHDRITGLR
                     EKPEYEFFVNAGVYVLSPAALDLVESDTFLDMPTLFARTGERGWKTVAFPLRETWLDV
                     GQHADLQRAEIEVHKIFSPTSN"
     gene            5174..6391
                     /locus_tag="VHN20_15020"
     CDS             5174..6391
                     /locus_tag="VHN20_15020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007065546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis protein"
                     /protein_id="HEX2727129.1"
                     /translation="MATGRSRSLFAADVDAAAATLRSVVTGKRVLAIGGAGTIGSSTV
                     TFLSGWDPACLHVVDQNENALAELVRGLRGRPQGLSVADFHTLPLDCGSPAFRLWLHE
                     QRPYDLVLNFAAIKHVRSEKDAISTLQMFDTNLRKQALVMSWLAEVGFTGRYFSVSTD
                     KAANPSSMMGATKRAMEHVLFDRASAGALEAVITSARFANVAFSNGSLLQGFEHRLAR
                     REPLAAPRETRRYFVSIEESGEICALAATAAPDRSIVIPRLDPREHLIRLEDVAVRFL
                     RRHGFEARFYEDEDAARGALEGDVRQGFWPLLLTPLDTSGEKPYEEFIAAGERTREIG
                     LPNLLTVAYEAAPAGSVAALIDAIERLFADAAGAKRPRTVTKDELKAIIGAVEPGFLA
                     THRESSRSLDQRL"
     gene            6532..>6960
                     /locus_tag="VHN20_15025"
     CDS             6532..>6960
                     /locus_tag="VHN20_15025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007196090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX2727130.1"
                     /translation="MIPLAIPNLAGNEAEYLAETVRSTFVSSVGPFVTRFESMVAEAA
                     GAPRAVATSSGTTGLHAAFVAVGVGRDDLVIAPSLTFIATVNAIAHTGAQPWLFDVST
                     ESWTLDAQLLRDRLERETERTAEGRVIHRATGRRVAAVAPV"
BASE COUNT         1160 a         2384 c         2349 g         1067 t
ORIGIN      
        1 cggtagcggt agcagtcgta attcacgacc gggatgccca acccgagcgc ccagcggatc
       61 gtcgccgaga tggacgcgat gtaaacgtcc gccagcggca cgagctcctc ggtgggcgcg
      121 gacgtcacga ccagcccggc cgccttgagc gatgccaggc gccaggtcgc caggcgcggg
      181 tgcggcttga cgatcacgtt ggcatgcgcc agcgccggcg cgagcgcctc tccccacgcc
      241 tggaccagcg tgtcgaagct cttgaattcg aatggcgaag tgtccggcga cgtgaactgg
      301 tccggcggga agccgacgac gaacagcggc cggccgggat cgagaccata cggggccagc
      361 aaggcctccc gccgcgccgg ccgcgtgcgc cggaccgcgt gcagcgtgtc atcgacgagg
      421 ctgcccgtca ccgccagctg accttcggcg aagccgagcg cacggtagtg gcgcagcatg
      481 gcctcgcttt cgatgcagat cacctcggcg ctgccggtat tgaggaccca gggctgcggc
      541 gggtcgaggc gcagggaatg catgctcagg atttccggcg cgggcaggcg cagcatggcg
      601 acgccgtcgt attcgtaagt ccattgcggc cagcgcgcgg cgacaaagcg ggcaagcgcc
      661 cccgagatta tgtggctcgg ttggttccga tagaaggcgg cgggctcctt cggattgggg
      721 atcgtcaacg gcagcacgaa atacgcgatc cgccgatcgg ccgcagcacc ggcgatgatc
      781 cgcgtccagc cgccgacgtt gtcctcgaag atcacgagcg catcgggctg ctcctcggtc
      841 agcagcgccg tgaactgcgc cttcagcgcc catttctccc gcaattgcgc gaaatacgtc
      901 atccagtccg gccggtgcct gcgatacagc ttattcatat cgcgaacctg gcggacgtag
      961 tggcgcgcgg cccacttgcc cgtccacggc acgatcagcg ccagcaccct gcggcgcacg
     1021 gggcggcgac gccgcgtcgg cctggcgctc aggttcgacg cccatctgcg ggcctcgcgc
     1081 gggaacctga cgacgcgccg cgccgcatgg acatagcgcc gcgcaggcca ttggccggcc
     1141 catggcgtgg ccgccgccag cacccagcgc cgggccatga tacggcgccc gcgacgcggc
     1201 ttcgaaagat atggcggaag ccgtcgcatg cgcctgacgc ggcgcttggc gcgctggacg
     1261 aaacgccggg cacggccctt gccgacccat ggcgcgatcg ccccgagcag cagccgctgc
     1321 gcggggatgc aggcgcgcac gcgcgcgaac gcgacacgca gacgccaggc gagcacgcgg
     1381 gccgaatgcc ggagcgctgc cctgctcgtc aggaaccggc agcgccgcca tatctgtcgg
     1441 gcacgcgccc gacctgccgg atcgagctcg agcacgaacg ccatgagcga agcgatccgc
     1501 gatgccatcg cgccagcagg gcgcctccgc agcacctgct gcgcaaagct caccatgacg
     1561 accgccagca ggaacggaag cgccgccacg atccgcaccg gcagcggaag gccgcgcgag
     1621 atgcgccgga tatgaacgcc gagccgccat tcccaggtgt cggtggcggt gggggccagt
     1681 cgagggccgc gcgcggcgac ggcaatcgcg ctcgggccga agggcacgcc ggccatgatc
     1741 ggcgcgacgc tgtcgccgag gcgcgcggaa accttctcag cctgagcctt ctcgtgctcg
     1801 ctggtgcaat agaacatgat gcggagcttg cgcatcacgc ctcacgcccg aatggtttgt
     1861 ttttcgacca tctcggagta gagccccttc tggccgacga gggccacgtg cgtcccgtcg
     1921 gcgacgacct gcccgttgtc gagcacgaga atgcgatcgg cgtcgcgcac ggttgaaagc
     1981 cgatgcgcga tcacgaggat ggtgcagccg cgggcgcgca actgcgcgac agtgtcttgc
     2041 acctgccgct ccgtgatcgc gtccagctgg ctggtcgcct cgtccagcag cacgagcctc
     2101 gcgtcgtgca gaaaggcgcg cgacagggcg atgcgctgct tctcgccccc cgacagcgcg
     2161 atgccaccgt cgcctatgac cgtgtcgaaa ccgtggtcga gcgcctcgat gaacggcagg
     2221 gccgcggcca tgcgtgccgc ctggcgcagc tgctcgtcgc tgaactcgtc cgggcggccg
     2281 aaggtcatgt tctcgcgcac cgtgccgcgg aagatcagga tgtcctggct gacataggcc
     2341 agccgcttcc agaaactcgc gatggcgagg tcgtcgagac ggcggccatc gaccgagatc
     2401 gatcccgaac cgggccgata gatgcgggtg agcagccgga acagcgtcgt cttgcccgat
     2461 ccggacggcc cgacgacggc gaccatctcg cccggcctgg tcgcgaacga gacgtcgcgc
     2521 aacagcggct tgccggggtc gtaggcgaag ctgacatggt cgaagctgat gcggccctgg
     2581 aagttcgcca gctcggtcga cccgtccgga tcgcgcgccg cctcggcgct cttgaggaac
     2641 gcatagagct tctcgacggc gtcgacatgc gtgacgaaat gcatgcgcgc gatatggaaa
     2701 acgctgagcg gccccagcag tcgcgccatc gccaccagga agaccaccag gatgccgagg
     2761 atggcctggg cgctctcggt ccgggtgaag gtcacgccga acatcaggct gcagacgaag
     2821 agcccgccga tcgtcgaaaa gaacgggtag gtcgccgact gcacggccag cgacttcatc
     2881 tgcgtccgcc gcagggcgtt cacgaggcgc tcgatcgttg ccaggatggc gtccgtggcg
     2941 tcggacacgc gcacgatgcg gtggttgtag atcgcctgca ggaaggtctg gttgtagctc
     3001 tcctgggccc gtgtcagctc ctcgcccagg ctgatcgcca gcgggcccgt gaggcgcttg
     3061 aagatgatcg agccgaccag cgtgaacgcg gcaaggccgg caagcaccat cggcgtgatc
     3121 gtgacgagca gcccgagcag gaggatggcc gtgatcgcgc tcgagaccat ctgcgccagg
     3181 aagcgggcgg cgatgccgac gcggatcggg aaactggcgg tgaggttgga gatttcgccg
     3241 gtcgagaggt tgtcgacgaa ccccatgcgg gccgccatga cgaggcgcag ggcgtggttg
     3301 cgcagggact gctcgatcgc cagcgggatc atgtaggtgg cgaggtcgac cacgtagccc
     3361 atgatcccgc gcagcagcac gatgagcagc acgatcaggg tgatccagcg cagccgctgc
     3421 gtgatgtcca tgccctggaa gaggccgccg aagtcgctga gcagagggat gccgcggaac
     3481 agcgcgtcgc tcgccagcgt gtcgaccagc ggcacaacga gcatcaccgt gaagccgtcg
     3541 gtcagggcgt tgacgacgga agcgacgatg aaggtgatcg tgaaggcggt tttttcgcgc
     3601 gacaggtaga tcaccttgcg cacgacgtca tagatgccgc gcacgcgggc ccgggccgcc
     3661 gccagcgtgc gtccggcccg gcgcagcagg cgcgccgccg catgcggctg acgaaccgtc
     3721 agcgcttggt cctggggggt cgtcaccttg tccacgcgct aggaatgttc cccgctagag
     3781 cccgacatcc tggcaggatc ggcggcaccg ccgaccgtcc tgtttcgcac tgcaattgct
     3841 cagcggatgc gggccgaacg tctgatgtaa catccgtccg ccccactacc tgatggttct
     3901 tcgcggcgca accgcggcga aatgtagtca caggctcgct ttttacttca agatcgacta
     3961 acaggcactc tgcggttgat ggggcgcgcc ggccttcgaa gcggctggac ccgacgcatg
     4021 attcgtgcat cttgcggcaa gcatgagact gttttctgat attgcaaaga tctgcctaga
     4081 cccccaggct cccatgcgcg aggcggtcgc cacgatcgat cgctccggca tcaagatcgc
     4141 cctggcggtg ggccccgacg ggcggctcct gggcacggtc acggacggcg acgtccgccg
     4201 ggcgctcctg cgcggctgcg acctcgatac gccgctcgac aagatcatgt cgtcgcatcc
     4261 gaagaccgcg ccggcatccg ccgatccggt cgccctgcgc gagcgcctgg tccgcgagga
     4321 ggtcctccat ctgccgctgg tcgacgaggc cgggcgggtc gtcgacatcg cctatctgcc
     4381 ggccctcgac ctcgcccagg aacggcacaa ccgggtggtc atcatggccg gcgggctggg
     4441 cacgcgcctg cggccgatca ccgagcagat cccgaaaccc atggtcgagg tcggcggccg
     4501 cccgcttctg cagatcatca tcgaaacctt cgtcaagcag gggttcggcc gcttcacgat
     4561 cgccctcaac tacctgggcg agatcatcga ggagcatttc ggcgacggct cccgcttcgg
     4621 cgccgagatc gaatatgtcc gcgagaccaa gcgcctcggc acggccggcg ccctcagcct
     4681 gatgccggag cggccgtccg agccgttcgt ggtgatgaac ggcgacatcc tgaccaacat
     4741 cgacttccgc gcgctcatca gcttccacga ggagagcagc gccgccgcca ccatggcggt
     4801 caactcgttc cgctttcagg tgccctacgg cgtcgtcgat ctggagcacg accgcatcac
     4861 cgggctgcgc gagaagccgg aatacgagtt tttcgtcaac gccggcgttt atgtgctctc
     4921 gcccgccgcc ctcgaccttg tcgaatcgga taccttcctt gatatgccga ccctgttcgc
     4981 gcgaaccggc gagcggggct ggaagacggt ggcttttccg ctccgcgaga cctggctcga
     5041 cgtcgggcag catgcggacc tgcagcgggc ggagatcgag gtgcacaaga tcttttcgcc
     5101 gaccagcaac tagatcccag cggcggcaca gcggatgatc gaacgagacg acaaggcgga
     5161 gccactcagt gccgtggcga ctggccgaag ccggtcgctg ttcgcggccg acgtcgacgc
     5221 cgcggcggcc acgcttcgtt ccgtggtcac cggcaagcgc gtcctcgcca tcggcggggc
     5281 gggcacgatt ggatccagca cggtcacgtt cctgtccggc tgggatcccg cctgcctgca
     5341 cgtggtcgat cagaacgaga acgcccttgc cgagctggtg cgcgggctgc gcgggcgccc
     5401 gcaagggctg tcggtcgccg attttcacac gctgccgctc gattgcggct ccccggcctt
     5461 ccgcctgtgg ctgcacgagc agcgccctta cgacctggtc ctcaacttcg cggccatcaa
     5521 gcacgtccgc tccgagaagg acgccatctc gacgctgcag atgttcgaca cgaacctgcg
     5581 caagcaggcg ctcgtgatga gctggctcgc cgaggtcggc ttcacgggcc gctatttctc
     5641 ggtctccacc gacaaggcgg ctaatccgag ctcgatgatg ggcgccacca agcgcgccat
     5701 ggagcacgtg ctgttcgatc gcgccagcgc cggcgccctc gaggcggtca tcacgtcggc
     5761 gcgctttgcc aacgtcgcct tctcgaacgg ctcgctcctg cagggcttcg agcatcgcct
     5821 ggcgcgccgc gagccgctgg cggcgccgcg cgagaccagg cgctatttcg tgtccatcga
     5881 ggagtcgggg gagatctgcg cgctcgccgc aacggcggcg ccggaccggt cgatcgtgat
     5941 cccgcggctc gatccgcgcg agcatctgat tcggctcgag gatgtcgccg tccgctttct
     6001 gcgccggcac ggcttcgaag cgcgcttcta cgaggacgag gacgccgcgc gcggcgcgct
     6061 cgagggcgac gtgcgccagg gcttctggcc gctcctgctg acgccgctcg atacgtcggg
     6121 cgagaagccc tacgaggaat tcatcgccgc cggcgagcgt acgcgcgaga tcggcctgcc
     6181 gaacctcctg acggtcgcct acgaggcggc gccggccggc agcgtcgccg ccctgatcga
     6241 tgccatcgag cgtctgttcg cggacgccgc cggcgccaag cggccgcgca ccgtcaccaa
     6301 ggacgagctc aaggccatca tcggcgccgt cgagccgggc tttctcgcca cccatcgcga
     6361 aagcagccgc agccttgacc agcgcctcta gagcatgatc cggaaaagtg ggcaccgctt
     6421 tgccgaaaaa ggcttgtccc ggacgagatc cgggatcatg cgacacaaac agaaagggag
     6481 cattgatcaa ttcaatctga attgatctat gctctagccg gtgaccagcc gatgatcccg
     6541 cttgccatcc ccaacctcgc cggcaacgag gccgaatacc tggccgagac cgtgcgctcg
     6601 accttcgtct cgtcggtcgg cccgttcgtg acgcgcttcg agagcatggt ggcggaggcc
     6661 gccggcgcgc cgcgcgcggt cgccacctcg tcgggcacca ccggccttca tgccgccttc
     6721 gtggccgtcg gcgtgggccg ggacgatctc gtgatcgcgc cgtcgctcac cttcatcgcg
     6781 acggtcaacg ccatcgccca taccggcgcg cagccttggc tgttcgacgt ctcgaccgag
     6841 agctggacgc tcgatgcgca gctcctgcgc gatcgtctcg agcgcgagac ggagcgcacg
     6901 gccgagggcc gcgtcatcca tcgcgcgacc ggccggcgcg tcgctgccgt cgcgccggtc
//
LOCUS       DATAIQ010000912         1536 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_253825, whole genome shotgun sequence.
ACCESSION   DATAIQ010000912 DATAIQ010000000
VERSION     DATAIQ010000912.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1536)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1536)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1536
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_253825"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(312..557)
                     /locus_tag="VHN20_15030"
     CDS             complement(312..557)
                     /locus_tag="VHN20_15030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727131.1"
                     /translation="MLAPTDTPSGHLTLQFLAWIGEAPRSYGEAMDAWRTSCPRLSIW
                     EDALQDGLIEVSHDRCAMRAASVTLTDRGRALLQRRA"
     gene            complement(665..1033)
                     /locus_tag="VHN20_15035"
     CDS             complement(665..1033)
                     /locus_tag="VHN20_15035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727132.1"
                     /translation="MCTIVVTLAAPILLALAGTGAAAQEAYESWPLLQNPFESTGGGG
                     IMIDGYRPVVTGNKCVTDFTAMEPGSAVHYNTVEFDAAPAQGGILCSVGKWRARDGSA
                     SGSTPLRVFIKDGIARRSPP"
     gene            1138..>1536
                     /locus_tag="VHN20_15040"
     CDS             1138..>1536
                     /locus_tag="VHN20_15040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727133.1"
                     /translation="MGRESAQCRRKSSSFCATVQPTVTNRRRIMLLNKALAVRRADAQ
                     LPQDIRAALVDSLYLPVAPLAAGAIAGAIVSAMVAFRANDPWLFACCLALWLVGFGRI
                     ASAFLYKRQRDATDFRRARRWERIYTAGAWS"
BASE COUNT          234 a          517 c          533 g          252 t
ORIGIN      
        1 ccgctcgcca cctggaagtg accatgacga tttggcctct cccgttcggg aggggggcgg
       61 atgcgaagca tcctgggtga gggcaggtcg ctgccggcat gcgcgcaacc tgcccgaccc
      121 gccccagctt gccgcgcagc attacgaccc cgggcacggc ggaggtggag aagtgcttcc
      181 gcgacaacat tcagaaagtc tcggaaagct gccgcagcgc catccgggcc tcgcgcggcg
      241 agggcggcaa ggccaactag cgcatgatcc ggcgaagtgg acaccacttc gccgaaatag
      301 atcatgcgat tctacgccct gcgctgcagc agcgcccggc cgcgatcggt cagcgtcacg
      361 ctcgccgcgc gcatggcgca gcggtcgtgg ctgacctcga tcagcccgtc ctgcagcgcg
      421 tcctcccaaa tcgacagccg cgggcacgag gtgcgccagg catccatcgc ctcgccatag
      481 ctccgcggcg cctcgccgat ccaggcgagg aactgcaggg tgaggtgacc ggacggcgtg
      541 tcggttggcg cgagcatgcg tgcatcatgc catgccggcg ccctggtttc catggcgcgg
      601 ccgcgcgcca gccttcctcg gcaagcatgg ccgggccggg cgagcggcgc cggcgcgata
      661 tcgctcaggg cggcgagcgc cgggcgatgc cgtccttgat gaacacgcgc aggggcgtcg
      721 agccggacgc cgagccgtcg cgggcgcgcc acttgcccac gctgcacagg atcccgccct
      781 gggccggcgc cgcatcgaac tcaaccgtgt tgtagtggac ggcgctgccg ggctccatcg
      841 ccgtgaagtc cgtcacgcat ttgttgccgg tgacgacggg cctgtagccg tcgatcatga
      901 tgccgccgcc gcccgtgctc tcgaaggggt tctgcagcag gggccaactc tcgtaggcct
      961 cctgtgcggc cgcgccggtg cccgcaagcg cgaggaggat cggtgccgcg agggtgacga
     1021 caatggtgca catgggcttc ttctcccgtg ttcgtccgcg gaggatggag cggatacccg
     1081 cgggcagccc tgacggatgc ggccggatgc cgcttccccg atgcgtcacg ggaaacgatg
     1141 ggcagggaaa gcgcgcaatg caggaggaaa tcttcatcct tttgcgcgac ggttcaaccc
     1201 acggtaacca atcgtcgtcg gatcatgctt cttaacaaag cccttgcggt gcgaagggca
     1261 gatgcgcagc tgccacagga catcagggcg gcgctggtcg actcgctgta tttgccggtg
     1321 gcgccgcttg cggccggcgc gattgctggc gcgatcgtct cggccatggt cgccttccgc
     1381 gccaacgatc catggctgtt cgcgtgttgc ctcgccctct ggcttgtcgg gttcgggcgc
     1441 atcgcgtcgg ctttcctcta caagcggcaa cgcgatgcca ccgatttccg gcgcgcgcgc
     1501 cgctgggagc ggatctatac ggcgggcgcg tggtct
//
LOCUS       DATAIQ010000913         3143 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_346068, whole genome shotgun sequence.
ACCESSION   DATAIQ010000913 DATAIQ010000000
VERSION     DATAIQ010000913.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3143)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3143)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3143
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_346068"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..372
                     /locus_tag="VHN20_15045"
     CDS             <1..372
                     /locus_tag="VHN20_15045"
                     /inference="COORDINATES: protein motif:HMM:NF019349.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FCD domain-containing protein"
                     /protein_id="HEX2727134.1"
                     /translation="LSPDAMAQVQDILAEQEQARRDPERFTRADDAFHRTIAEDVGIA
                     QIWAVLEREKSQLDRVRFLSLPSITPVDDLIRQHKGIIAAIARRDPDAAEAAMRAHLS
                     EVLKIVEKLAAKHPDLIVDDA"
     gene            382..1899
                     /locus_tag="VHN20_15050"
     CDS             382..1899
                     /locus_tag="VHN20_15050"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009031176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mannitol dehydrogenase family protein"
                     /protein_id="HEX2727135.1"
                     /translation="MSVEHPRLSSASLERARAGTLRPAYDRHRLRTGIVHLGLGAFVR
                     AHQALYTDDLLATEPGAWGMTGVSLQRPDQRDRLMPQDGLYTTLQRDSTGVSARIVGC
                     LRSVLVAPEDPAAVIAAMADAHIRIVSLTVTEKAYCADPASGRLQAHHPDIRHDLEHA
                     EEPRTAVGFLVAALRRRRAEGKAPFTVLCCDNLPSNGRLVARLVGDFAALAEDGLAGW
                     IGSNVAFPATMVDRIVPATTPDDLAEAARVTGLADAAPVVHEPFRQWVVEDRFVDGVR
                     PAWHRVGAEFVGDVAPYEHMKLRLLNGAHSALAYLGYLAGHETIADAVADPVLRDFVQ
                     ALWRDEIIPVVPPPSGTDLSGYAGVLLDRFANPEVRHRTWQIAMDGSQKLPQRLLETM
                     RERLARDLPVGGLALAIAAWLRYVGGTDERGAMIDVRDPLAPHLRQLLDQAGDDPGAR
                     VRAVLAIDAIFGADLARDSRFERALVDAYGSLLARGARGAVTELMSRRAACDAAH"
     gene            1910..3106
                     /gene="uxuA"
                     /locus_tag="VHN20_15055"
     CDS             1910..3106
                     /gene="uxuA"
                     /locus_tag="VHN20_15055"
                     /EC_number="4.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008972510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008927 - mannonate dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006064 - glucuronate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mannonate dehydratase"
                     /protein_id="HEX2727136.1"
                     /translation="MEQTWRWFGPDDVIQLGHIRQAGATGIVTALHHIPYGVVWSVEE
                     IEARKALIAADATLGLRWSVVESLPVHESIKIGEGDLGPLFDNYRQSLRNLARCGVTT
                     VCYNFMPVLDWTRTELAHPLPGGGTALRFNAHEFAAFDCFMVQRPGADEDHPAEVLAR
                     ARTWFERASEGDKRRLLANIMAGLPGAYDRYDVPGLRRMLDRYRNIDAGQLRANLARF
                     LREVVPVADEVGVRMCIHPDDPPRPVLGLPRIVSNEADLAFITDAVDSVANGITLCSG
                     SLGAGRHNDVPAIARRFAPRIHFAHLRNVAKEPDGSFMEADHLGGDTDMVALVGILLD
                     EQKRRRDAGDPRWRISMRPDHGHELLDDVGKPTHPGYPAIGRLKGLAELRGVMLSIAA
                     LRGLPL"
BASE COUNT          444 a         1167 c         1036 g          496 t
ORIGIN      
        1 ctgtcgccgg acgccatggc gcaggtgcag gacatcctgg ccgagcagga gcaggcgcga
       61 cgggatccgg agcgtttcac ccgcgccgac gacgccttcc atcgcacgat cgccgaggac
      121 gtcggcatcg cccagatctg ggccgtcctc gaacgggaaa agtcacagct cgatcgcgtg
      181 cgcttcctga gcctgccctc gatcaccccg gtcgacgacc tgatcaggca gcacaagggc
      241 atcatcgccg caatcgcgcg tcgcgacccc gacgctgccg aagccgccat gcgcgcccac
      301 ctgtcggagg tcctcaagat cgtggagaag ctcgccgcca agcatcccga cctgatcgtc
      361 gacgacgctt gagccttccc cgtgtcggtc gagcatcccc ggctgtcgtc tgcgagcctc
      421 gaacgggcgc gcgccggaac gctgcgtccc gcctacgatc gccatcggct tcgcaccggc
      481 atcgtccatc tcggtctcgg cgccttcgtc cgcgcgcatc aggcgctcta cacggacgat
      541 ctccttgcga ccgagcctgg cgcctggggc atgaccggcg tcagcctgca gcggcccgac
      601 cagcgcgacc gcctcatgcc gcaggacggg ctctatacga cgctgcagcg tgacagcacg
      661 ggcgtttcgg cgcgcatcgt cggatgtctt cgctcggtct tggtcgcgcc tgaagatcct
      721 gccgccgtca tcgccgcgat ggcggacgcg catatccgca tcgtcagcct gaccgtgacc
      781 gagaaggcct attgcgccga ccccgccagc ggccgcctgc aggcccacca tccggacatc
      841 cggcacgatc tcgagcacgc ggaagagccg cgcaccgcgg tgggcttcct ggttgcggca
      901 ctgaggcgcc ggcgcgccga gggcaaggcg cctttcacgg tcctttgctg cgacaatctt
      961 ccgtccaacg gccgcctcgt cgcccgcctt gtcggcgact tcgccgcgct ggcggaggac
     1021 gggcttgccg gttggatcgg gagcaacgtc gcgttccccg cgaccatggt cgaccgcatc
     1081 gtgccggcga ccacgccgga cgacctggcc gaggccgccc gggtcaccgg cctcgccgac
     1141 gcggcgcccg tcgttcacga gcctttccgc caatgggtgg tggaggaccg cttcgtcgac
     1201 ggcgtgcgcc cggcctggca tcgggtcggc gcggagttcg tcggcgacgt cgcgccctac
     1261 gagcacatga agctgcggct gcttaatggc gcccactcgg cacttgcgta tctcggctac
     1321 cttgccggtc acgagaccat cgccgacgcc gtcgccgatc ccgtgctgcg ggatttcgtc
     1381 caggcgctct ggcgcgacga gatcatcccg gtcgtgccgc cgccgtccgg caccgatctg
     1441 tcgggctacg cgggcgtcct ccttgaccgc ttcgccaacc ccgaggtgcg gcaccggacc
     1501 tggcagatcg ccatggacgg ctcgcagaag ctgccgcagc ggctgctcga gaccatgcgc
     1561 gagcgcctcg cgcgcgacct gccggtcggc gggctcgcgc tcgcgattgc cgcgtggctg
     1621 cgttatgtcg gcggcaccga cgagcgcggc gccatgatcg acgtgcgcga ccccctcgcg
     1681 ccgcatctcc gtcagctcct cgatcaggcc ggcgacgatc ccggagcacg cgtccgcgcc
     1741 gttctcgcca tcgacgcgat cttcggggcc gatctcgccc gtgactcgcg tttcgagcgg
     1801 gcgctcgtcg acgcctatgg cagccttctc gcccgcggcg cgcgcggcgc cgtcaccgag
     1861 ctcatgtctc gccgcgccgc ctgcgacgcc gcgcattgag gtcatcacca tggaacagac
     1921 gtggcgctgg ttcgggcccg acgacgtcat ccagctcggg catatccgcc aggccggagc
     1981 gacgggcatc gtcaccgctc tgcatcacat tccctacggc gtggtctgga gcgtcgagga
     2041 gatcgaggcc cgcaaggccc tgatcgccgc cgatgcgacg ctcggcctca gatggagcgt
     2101 cgtcgagagc ctgcccgtgc acgagtcgat caagatcggc gagggcgacc tcgggccgct
     2161 gttcgataat tatcgccagt cgctgcgcaa cctcgcccgc tgcggcgtca ccacggtttg
     2221 ctacaatttc atgccggtgc tcgactggac gcgcacagag cttgcgcatc ccttgcccgg
     2281 cggcggcacg gcgttgcgct tcaacgcgca cgagttcgcg gccttcgact gcttcatggt
     2341 gcagcggccc ggcgccgacg aggatcaccc ggcggaggtg ctggcgcggg cgcgcacatg
     2401 gttcgagcgc gcgtccgaag gcgacaagcg caggctcctc gccaacatca tggccgggct
     2461 tccgggcgcc tatgaccgtt acgacgtgcc gggcctgcgg cggatgctcg accgctaccg
     2521 caacatcgat gccgggcaac tgcgggccaa cctcgcccgc ttcctgcgcg aggtcgtgcc
     2581 ggtcgccgat gaggtcggcg tgcgcatgtg catccatccc gacgacccgc cgcgccccgt
     2641 gctggggctg cctcgcatcg tctcgaacga ggccgatctc gccttcatca cggacgcggt
     2701 cgactcggtc gccaacggca tcaccttgtg cagcggatcg ctcggggccg ggcgccacaa
     2761 cgacgtgccg gcgatcgccc gtcgctttgc gccgcgcatc cacttcgcgc atctgcgcaa
     2821 cgtcgccaag gagccggacg gctcgttcat ggaggccgac catctcggcg gcgacaccga
     2881 catggtcgcg ctggtgggca tcctgctcga cgagcagaag cgccgtcgcg acgccggcga
     2941 cccgcgctgg cgcatttcga tgcggccgga ccacggccac gagctcctcg acgacgtcgg
     3001 caagccgacc catccgggat atccggccat cgggcgcctg aaggggctgg ccgagctccg
     3061 cggcgtgatg ctgtcgatcg ccgccctgcg cggcctgccg ctatgacagg agccagcgca
     3121 gtgaagcgtc tgtcgcttgc cac
//
LOCUS       DATAIQ010000914         1699 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_254040, whole genome shotgun sequence.
ACCESSION   DATAIQ010000914 DATAIQ010000000
VERSION     DATAIQ010000914.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1699)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1699)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1699
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_254040"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            218..1024
                     /locus_tag="VHN20_15060"
     CDS             218..1024
                     /locus_tag="VHN20_15060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727137.1"
                     /translation="MRSDVYWRRAVFVALVAGGCFASFTPEFGIIGVGVAEAKSFYTR
                     KRVNGVWVKGKFPKRNALNKSHEASSKRSRRSRSAALPVTTGSLSAAPEYVMVPAAAA
                     PSSAAVETGRAPHRAWPMQSASAHPSAPLPQGSAIAQSTSATAGALAPQTVLSNPALP
                     AARAPAVVPQMAPGAHEPPLVSPSDEQRLSKLREALQARASSLATGSSTASLPTLRPT
                     PEPQSVTFDFKSGVKTTIFADGTIVEDAFDVASVRGMASTPPAATGSGLR"
     gene            1219..>1699
                     /locus_tag="VHN20_15065"
     CDS             1219..>1699
                     /locus_tag="VHN20_15065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727138.1"
                     /translation="MSPRDSWSPGPIDLPPICKHLSSDYLNQYREVLRLIEAAPRDEA
                     AADALLIWQAKSYRAYHAQSGPLHISAYEALPGMRRHVFEKLMAEMDMLIEMACFALQ
                     WPCNLDLALPVAEITVSGLRGMIGRAATFLDSGGRDLGHPADSETAESILDRIRAVSG
                     "
BASE COUNT          259 a          591 c          555 g          294 t
ORIGIN      
        1 cgatccacgc cgaccacgct cggcgagatg gatcgccgct cgtggccggc ggaaaggcct
       61 ctcggcgcaa ccttcaaagt agatcatttt gacacggcca gcatcttgag cccggcgccg
      121 tgtactggaa taaccaccgc ccggatttcg ccggccacct gatcggtgcc ggtgccgaga
      181 tgggccgcaa aataggtcga gtgccaggag tatgtgcatg cgttccgacg tttattggcg
      241 acgagctgtt ttcgttgcgc tcgttgccgg cggatgcttt gcttcgttca ctcctgaatt
      301 cggcattatt ggcgtcggcg tcgcggaagc caaatctttc tatacgcgca agcgcgtcaa
      361 cggcgtgtgg gtcaaaggga aattcccgaa gcgcaacgcc ctgaacaaga gtcacgaggc
      421 ctcgtccaag cgcagccggc ggtccaggag cgccgctctt ccggtgacca ccgggtcgct
      481 ctcggcggcg cccgagtatg tcatggtgcc ggcggccgct gcgccgtcgt cggctgccgt
      541 cgagacgggg cgcgctccgc acagggcatg gcccatgcaa agcgcgagcg cccacccgtc
      601 cgcacctttg ccccagggtt ccgccatcgc ccagtcgacg tcggcgacag cgggggcctt
      661 ggctccgcag acggtcctgt cgaacccggc cttgccggcc gcccgcgccc cggccgtggt
      721 gcctcagatg gcgcccggcg cgcatgagcc gccgcttgtc tcgccctcgg acgagcagcg
      781 cctgagcaag ctgcgcgagg cgttgcaggc gcgcgccagc agcctggcca ccggcagcag
      841 cactgcatcc ctgccgacgt tgcggccgac gccggagccg caatcggtga cgttcgactt
      901 caagtccggc gtgaagacga cgatcttcgc cgacggcacc atcgtcgagg acgccttcga
      961 cgttgcttcg gtcaggggca tggcctcgac gccgcctgcc gcgaccggct ccgggctgcg
     1021 ctgatcggcg cggcgaggcc gggggcgccc cggcggtcgc cccttcgctc acgtcatcct
     1081 ggatgtcgcc aaaagcgccc ggttgacggg cgatgcccac gcgcaggcgc ggtcaatctt
     1141 tcgttagccc ttctctgcgc tttatgaaca cgtccgagag accgtgtcgt cgtgccgtca
     1201 gatcctcatg ccgtatcgtt gtcgccgcgg gactcctgga gcccgggtcc catcgacctg
     1261 ccgccgatct gcaagcatct ctcgagcgac tacctgaacc agtatcgtga ggtgctgcgg
     1321 ctgatcgagg ccgctccccg cgacgaggca gctgccgacg cgctcctgat ctggcaggca
     1381 aagagctacc gcgcctatca cgcgcagtcg ggaccgctgc acatctcggc gtacgaggcg
     1441 cttccgggca tgcgccggca cgtcttcgag aagctcatgg ccgagatgga catgctgatc
     1501 gagatggcgt gcttcgccct gcaatggccc tgcaatctgg atctggcgct ccccgtggcc
     1561 gagatcaccg tgtctgggtt gcgcgggatg atcgggcgcg cggcgacctt cctcgacagc
     1621 ggcggccgcg accttggcca cccagcggac tcggagaccg cggaatcgat cctcgaccgc
     1681 atccgcgctg tcagcggtc
//
LOCUS       DATAIQ010000915         2289 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_68343, whole genome shotgun sequence.
ACCESSION   DATAIQ010000915 DATAIQ010000000
VERSION     DATAIQ010000915.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2289)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2289)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2289
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_68343"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1073)
                     /locus_tag="VHN20_15070"
     CDS             complement(<1..1073)
                     /locus_tag="VHN20_15070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018261506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HEX2727139.1"
                     /translation="MSDKRVATSPRTDAAPFGRTEGSGPEVSSFTLDNRLEVVVIPDR
                     RVPVVTHMIWYRNGSADDPLGESGIAHFLEHLMFKGTNKHPAGEFSQVVSALGGQENA
                     FTSFDYTAYFQRVAREHLKTMMEFEADRMTGLVLDDSVVAPERDVVLEERRMRVETDP
                     AAQLSEAMAAALFVHHPYGIPIIGWMHEIETLDRAHALAYYRRFYTPENAILVVAGDV
                     TSGEVRELAEATYGRVAPRGETPVRTRPREPEPRAARHVAVCDPKVEQPTLQRLYLTP
                     SCLTGTGREALALELLAEVLGGGPTSYLYRKLVLELGVAVNAGSWYMGSAMEDTRFSL
                     YAVPAAGLTLESLEGSLDGAIAR"
     gene            complement(1208..1864)
                     /locus_tag="VHN20_15075"
     CDS             complement(1208..1864)
                     /locus_tag="VHN20_15075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727140.1"
                     /translation="MKGISIARLGLTLGAGLLSAALVTGARAQEGEMMKNLLATLGVI
                     DDERDPIEYRERAPLVLPPRTDLPTPVAPGTSQARSPQWPNDPNVMARKRREAEANTP
                     VGETDRKRMLEGHGRLTPAEMRAGTRAGAGLATGPVTRSDGKEGHWMHPDVLRAQGVQ
                     RSAEVKPDDGRRRTLTDPPSAYRKSATGRDITGGFEVQEKINEADPRAFQRQVQQQRN
                     "
     gene            complement(1937..>2289)
                     /gene="lspA"
                     /locus_tag="VHN20_15080"
     CDS             complement(1937..>2289)
                     /gene="lspA"
                     /locus_tag="VHN20_15080"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015927145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="signal peptidase II"
                     /protein_id="HEX2727141.1"
                     /translation="VWNRGISYGLFQQHTEIGRWVLLGISIAAAVGLSLWMARTPSRF
                     LAVSLGLIVGGAVGNAIDRLAYGAVFDFVHFHIGQFSWYVFNIADAAIVAGVIGLIYD
                     SLVLDKRRAHQASA"
BASE COUNT          374 a          766 c          776 g          373 t
ORIGIN      
        1 atacgggcga tggccccgtc cagtgatcct tccaggctct ccagggtgag ccccgcggcc
       61 gggaccgcgt aaagggagaa gcgcgtgtct tccatggccg agcccatgta ccacgacccg
      121 gcattcacgg cgacgccgag ctcgagcacg agcttgcggt agagatagga ggtcggtccg
      181 ccgccgagga cttcggcgag gagttcgagc gcgagcgcct cgcgcccggt gccggtgaga
      241 caggacggcg tcaggtagag gcgctgcaag gtcggctgct cgaccttcgg atcacacacc
      301 gcgacgtgcc gcgcggcgcg cggctcaggc tcgcgcgggc gcgtgcggac cggcgtctcg
      361 ccacgcgggg cgacgcggcc gtaggtggcc tcggccaact cacgcacctc cccgctcgtc
      421 acgtcgccag ccacgaccag gatggcgttc tcgggggtgt agaaacggcg gtaataggcg
      481 agcgcatggg cacggtcgag cgtctcgatc tcatgcatcc agccgatgat cggaatgccg
      541 taagggtggt ggacgaacag cgccgccgcc atggcctcgg aaagctgcgc cgcaggatcg
      601 gtctcgacgc gcatgcggcg ctcctcgagc accacgtcgc gctccggcgc gacaacgctg
      661 tcgtcgagaa cgaggccggt catgcggtcg gcctcgaact ccatcatggt cttgaggtgc
      721 tcgcgggcga cgcgctggaa atacgccgta tagtcgaacg aggtgaacgc gttctcctgg
      781 ccgccgaggg ccgacacgac ctggctgaac tctcccgccg ggtgcttgtt cgttcccttg
      841 aacatcaggt gctcgaggaa atgcgcgatg ccggattcgc cgagcggatc atcggccgaa
      901 ccgttgcggt accagatcat gtgcgtgacg accggcacgc gccgatcggg aatcaccacg
      961 acctcgaggc ggttgtcgag agtgaatgac gaaacctcag gcccgctccc ttccgtgcgc
     1021 ccaaacgggg ccgcatcggt gcgcgggctt gtggccaccc tcttgtcgga cattctcttc
     1081 acctcgccgg gtatggagga taattggtga tcgcgaaatg acgcgcgtca gccggaccgg
     1141 cagaccgaag gcaaaatctc tacgccgcgt ccagaagcaa atctactctc aggcgcacgt
     1201 gaaccggtca gttgcgctgc tgctgcacct gacgctgaaa agcccgcgga tcggcttcgt
     1261 tgatcttctc ctgcacctcg aacccgccgg tgatgtcccg gccggtcgcg gacttgcggt
     1321 aggccgaggg aggatcggtc aaggtgcggc gcctgccgtc gtccggtttg acctcggcgc
     1381 tgcgctggac gccctgcgcg cgcaggacgt cgggatgcat ccagtgccct tccttgccat
     1441 ccgagcgcgt gaccggtccg gtcgccagcc cggcgcccgc gcgcgtgccg gcgcgcatct
     1501 cggccggggt cagccggcca tggccttcga gcatgcgctt ccggtcggtc tcgcccaccg
     1561 gcgtgttggc ttcggcctcg cggcgcttgc gcgccatgac attcgggtcg ttcggccatt
     1621 gcggcgagcg cgcctgcgag gttcccggcg ccaccggcgt cggcaggtct gtccgcgggg
     1681 gcaggaccag cggcgcacgc tcgcgatact cgatcgggtc gcgctcgtcg tcgatgaccc
     1741 ccagggttgc caggaggttc ttcatcatct cgccttcctg ggcccgcgcg cccgtgacca
     1801 gggccgcgga gagcaggccg gcgccgagcg tcagcccaag gcgggcaatg ctgatgcctt
     1861 tcatggcagt atcctcatga tcgatgcccc tgatccccgt ttcgggcgat cctgtggcgg
     1921 cttggccgca tcttgttcaa gcactcgctt gatgcgcccg gcgtttgtcg agcaccagcg
     1981 aatcataaat gaggccgatg acgcccgcaa cgatggcggc atcggcgatg ttgaacacat
     2041 accacgagaa ctggccgatg tggaaatgca cgaaatcgaa cacggcccca taggcgagcc
     2101 ggtcgatggc gttgccgacg gcgcccccga cgatcaggcc cagggaaacg gccaggaagc
     2161 gtgacggcgt gcgcgccatc cacagcgaca ggccgacggc tgccgcgatc gagatgccga
     2221 gcagcaccca gcgcccgatc tccgtgtgct gctggaacag gccgtaggag atgccgcggt
     2281 tccacacca
//
LOCUS       DATAIQ010000916         2058 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_68401, whole genome shotgun sequence.
ACCESSION   DATAIQ010000916 DATAIQ010000000
VERSION     DATAIQ010000916.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2058)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2058)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2058
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_68401"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..716
                     /locus_tag="VHN20_15085"
     CDS             <1..716
                     /locus_tag="VHN20_15085"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEX2727142.1"
                     /translation="WYETFRIVGVPAEVRMHMSVGTALAVMIPTALVSYLGHRKRGSV
                     DERMVKAWALPVVLGVVAGSFVAAVANQIVLKFVFAILAAFTGIKMLSSRMTWRLKSD
                     DPSLPATYAAGLLTGLFSSLMGIGGGVFGNMFLSLYGRPMHQIVGTSASLGVLIAVPG
                     MIGYMVAGLPYANLTPPASIGYVSLLATLIVAPIAAVSAPLGVRVAHAFTPQQLKRAF
                     GYFLLVLSARFWVSILVGV"
     gene            complement(723..1721)
                     /gene="dusA"
                     /locus_tag="VHN20_15090"
     CDS             complement(723..1721)
                     /gene="dusA"
                     /locus_tag="VHN20_15090"
                     /EC_number="1.3.1.-"
                     /EC_number="1.3.1.91"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004448224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017150 - tRNA dihydrouridine synthase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0002943 - tRNA dihydrouridine synthesis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine(20/20a) synthase DusA"
                     /protein_id="HEX2727143.1"
                     /translation="MTPEDIRFSVAPMMDWTDRHCRFFHRLLSRRIRLYTEMVTTGAV
                     IHGPRQKLLGFSPDEHPLAVQLGGSDPRDLATAARICADLGYDEVNLNVGCPSDRVQE
                     GRFGACLMREPALVGDCVAAMKAAVTIPVTVKCRIGVDEQDSEEALNALADAVVAAGV
                     DALVVHARKAWLQGLSPKENRDVPPLDYGRVHRLKRAHPGLPIAINGGVLTIEDAKAH
                     LKHVDGVMLGRAAYQNPELLLAVDPELFGEASPVADPFAAMEAFEPYVAARLAEGVRL
                     HQMTRHILGMFAGRPGARLFRRHLATEAGKPGAGLQTLRDAVEHVRRTTAQLQAAA"
BASE COUNT          309 a          716 c          682 g          351 t
ORIGIN      
        1 cttggtacga gacgttccgc atcgtcggcg tgccggccga ggtgcgcatg catatgtcgg
       61 tcggcacggc gctcgccgtg atgatcccga ccgcgctcgt gtcgtatctc ggccaccgca
      121 agcgcggcag cgtcgacgag cgcatggtca aggcctgggc gctgccggtc gtgctcggcg
      181 tcgtcgccgg ctccttcgtg gctgcggtcg ccaaccagat cgtcctcaaa ttcgtattcg
      241 ccattctcgc cgccttcacg ggcatcaaga tgctgtcgag ccggatgacg tggcggctca
      301 agagcgacga tccctcgctg ccggcaacct acgccgccgg cctcctcacc ggcctgttct
      361 cgagcctgat gggcatcggc ggcggcgtct tcggcaacat gttcctgagc ctctatgggc
      421 ggccgatgca ccagatcgtc ggcacctcgg cgagcctcgg cgtgctgatc gccgtgcccg
      481 gcatgatcgg ctacatggtc gccggcctgc cctacgccaa cctcacgccg ccggcctcga
      541 tcggctacgt gtcgctgctg gcgacgctga tcgtcgcgcc gatcgccgcc gtgtcggcgc
      601 ccttaggcgt gcgcgtcgcg cacgccttca cgccgcagca gctcaagcgc gccttcggtt
      661 attttctgct ggtcctgtcg gcgcgctttt gggtgtcgat cctggtgggt gtttgagctc
      721 cgtcaggccg ccgcctgcag ctgcgccgtg gtgcggcgca cgtgctcgac cgcgtcgcgc
      781 agcgtctgaa gcccggcgcc cggcttgccc gcttcggtcg ccaggtgccg gcggaagaga
      841 cgcgcgcccg gccggcccgc gaacatgccg aggatgtggc gggtcatctg gtgcaggcgc
      901 acgccctccg ccagccgcgc cgccacatac ggctcgaacg cttccatcgc cgcgaacgga
      961 tccgcgaccg gcgatgcctc gccgaacagc tcgggatcga cggcgagcag cagctccgga
     1021 ttctggtagg cggcgcgccc gagcatcacg ccgtcgacat gtttcagatg cgccttcgca
     1081 tcctcgatgg tcagcacgcc gccgttgatg gcgatcggca gccccggatg cgcccgcttg
     1141 agccgatgca cgcgcccata atcgagcggc ggcacgtcgc ggttctcctt cggcgacagc
     1201 ccctgcagcc acgccttgcg cgcatgcacg acgagcgcgt cgacgcccgc cgcgaccacc
     1261 gcatcggcaa gcgcgttcag cgcttcttcc gagtcctgct cgtcgacgcc gatgcggcac
     1321 ttgaccgtga ccgggatcgt gaccgccgcc ttcatggccg cgacgcagtc gccgacgagc
     1381 gccggctcgc gcatcaggca ggcgccgaaa cggccctcct gcacccggtc cgacgggcat
     1441 ccgacattga ggttgacctc gtcgtagccg aggtcggcgc agatgcgcgc cgccgtggcg
     1501 agatcgcgcg ggtcggagcc gccgagctgc accgccagcg gatgctcatc cgggctgaac
     1561 ccgagcagct tctggcgcgg cccgtggatc acggcccccg tcgtgaccat ctcggtgtag
     1621 agccggattc ggcgcgacag aaggcgatgg aagaaccggc aatgccggtc agtccagtcc
     1681 atcatcggtg cgacggaaaa gcggatgtcc tcgggggtca tgcccggggg agatagaggg
     1741 ccgaggcgcg gggggcaatg ggccggctgc ccgaaagaac catcccgggg tcgaaggccc
     1801 aaaccttcac gatcgtcgac aagtgcttgg caggcgcagc ttccttgcga acagggagcc
     1861 acgttaagaa ggggttgacc ttaccacaat gggaagcttt agggtgactt caccgtgatg
     1921 cgccagaaag gccgtttagc ctgttcaggt aagcacattg gaaacccctg gccgacgact
     1981 taggttatcg gttcctggag aagcctgtgg ccgctgccgc caaccacctt cgtcgtctcg
     2041 tcgcgagcat catgctag
//
LOCUS       DATAIQ010000917         3416 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_208559, whole genome shotgun sequence.
ACCESSION   DATAIQ010000917 DATAIQ010000000
VERSION     DATAIQ010000917.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3416)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3416)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3416
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_208559"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..378)
                     /locus_tag="VHN20_15095"
     CDS             complement(<1..378)
                     /locus_tag="VHN20_15095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009208391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX2727144.1"
                     /translation="MISPASSARLEPGVTAAAKPLLVIDDVVKRFETPEGAVVAVDHM
                     SFDVAPGEFLSLIGPSGCGKSTLFNIVGGLLGQYDGRVTIGGEAIAGPHPAIGMVFQE
                     ESTFPWRTVLDNVAFPLEIKGVPK"
     gene            682..1470
                     /locus_tag="VHN20_15100"
     CDS             682..1470
                     /locus_tag="VHN20_15100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007689039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HEX2727145.1"
                     /translation="MCTASSGAQDGTTISAVVPDARAELTPPDPALVEELAIANRILF
                     QQGVVDAFGHISVRHDKRPDRYLLARNMAPRLVTPDDIVEFDLNSNPLTANGRAVYLE
                     RFIHGEIYRTRPDVIAVVHSHSPAVVPFGIVKSVAFRPVCHMSGFIGEATPIFEIRDV
                     VGDSSDLLVRDHKLGAALAKTLGSGSVVLMRGHGSTAVGNSIRQVVYRAVYTELNARL
                     QSEAMRLGPVTYLTPGEARTADVNVGTQINRAWDFWRMQAEGKI"
     gene            1550..2500
                     /locus_tag="VHN20_15105"
     CDS             1550..2500
                     /locus_tag="VHN20_15105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007689027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX2727146.1"
                     /translation="MLHHKALAAIAAVAALLLGGAASAQDKLKVAIGQRGTLENSVTE
                     LGQDAGFFKKHGLVLEILYTQGGGETQQAVISGSVDIGIGVGTHGVFGAFAKGAPVRI
                     IGAGVTGANDLFWYVPANSVIKSIKETAGKTVAYSTTGSSSNSIVLAFQKHFGVALKP
                     VATGSPPATFTQVMSGQIDVGWATPSFGVQQGDKIRAIARGGDVPDFRDQTVRVTIAN
                     AGALEQRKDAFVRYMRAYRETLDWLYADPAAIKPAATWTGMPESAVARVRDEYYPKDS
                     VDPDKISGVDKITTDAIAFKFLAAPLSKEQLEQLIQVPLK"
     gene            2631..>3416
                     /locus_tag="VHN20_15110"
     CDS             2631..>3416
                     /locus_tag="VHN20_15110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018700854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX2727147.1"
                     /translation="MQSAPDAATTAKRQEFYERLGPRNLAPLWEVLKGLVPREPKSKA
                     VPFQWRYDEVRPLLIESGSLLTAEEAERRVLVLENPAFVGQSRTTSTMYAGIQLIMPG
                     ETAPAHRHTPSALRFMLEGEGAFTAVGGERTTMREGDFVITPAWAWHDHGNEGTGPCA
                     WMDGLDIPVVQFFETIFSEEYNDQRQSLSRPEGDALARFGQGLLPLGAESRYGLTTPI
                     FNYPYERTREALVKAAAGEEPNAHEAVSLRYANPLDGGWAMPTI"
BASE COUNT          592 a         1169 c         1145 g          510 t
ORIGIN      
        1 cttcggcacg cccttgatct cgagcggaaa agcgacgttg tccagcaccg tgcgccaggg
       61 gaaggtcgac tcttcctgaa acaccatgcc gatcgccgga tgcggcccgg cgatcgcctc
      121 gccgccgatc gtcacgcgtc catcgtattg cccgaggagg ccgccgacga tgttgaacag
      181 ggtggacttc ccgcagcccg acgggccgat cagggacagg aactcgcccg gcgcgacgtc
      241 gaacgacatg tggtcgacgg cgaccacggc gccttccggg gtctcgaagc gcttgaccac
      301 gtcgtcgatc acgagcagcg gtttggcggc cgctgtgacg ccgggctcga gacgggccga
      361 tgaggcggga gagatcatct gcgcagctaa tggttccggg gtcgcacgcc gcgcgcgcac
      421 aaccaaacgg cgggtattgg ccgggctcgc gccgcagcgg cgaagcaggc tttgcgcaag
      481 ccgatcctcc tcgtagccgg cgcggtcgcg cgccgcgctg cgcggcgaga gttgactgcc
      541 cggcaggacg tgtcaatggt ttcccatcct tcacggctgc ccacgtcacg gcgcttcaca
      601 ccgatccggt gcggcccggc tccggcaggt cttgcgaaac attcgaccgg ccgcacggcc
      661 ggcatcaggg gaggcgaatt gatgtgcact gcgagttccg gcgctcaaga cgggacgacg
      721 atctcggcgg tcgtgcccga cgccagggcg gagctcacgc cgcccgaccc ggctctggtc
      781 gaggagttgg cgatcgccaa ccgcatcctg ttccagcagg gggtggtcga tgccttcggg
      841 catatcagcg tgcgccatga caagcgcccc gaccgctatc ttctggcgcg caacatggcg
      901 ccgcggctgg tcaccccgga cgacatcgtc gagttcgacc taaacagcaa cccgctcacg
      961 gccaacggtc gtgccgttta tctcgagcgt ttcattcacg gcgaaatcta ccgcacccgc
     1021 ccagacgtga tcgccgtcgt gcacagccat tcgcctgcgg tggtgccgtt cggcatcgtc
     1081 aagagcgtgg cgttccgccc ggtctgccac atgagcggct tcatcggcga ggcgacgccg
     1141 atcttcgaga tccgcgacgt ggtgggcgat tcgagcgacc tgctcgtgcg cgaccacaag
     1201 ctcggcgccg ccctggccaa gaccctcggc tccggctcgg tcgtgctgat gcgcgggcac
     1261 ggctccaccg ccgtcggcaa ctccatccgc caagtggtct accgggccgt ctacaccgag
     1321 ctcaacgcgc gtctgcagtc ggaggcgatg cggctcgggc cggtcaccta cctcaccccc
     1381 ggcgaggcgc gcaccgccga cgtcaatgtc ggcacgcaga tcaaccgcgc ctgggatttc
     1441 tggcgcatgc aggccgaagg caaaatttaa aaacacgaac gattgtcatc ccgggccgcg
     1501 ctgcaagcgc gggccggagc cgacaggcgt ttcataaggg aggaacatca tgctgcatca
     1561 taaggcgctc gccgcgatcg ccgccgtcgc ggccctgctg ctgggcgggg ccgcgagcgc
     1621 gcaggacaag ctcaaggttg ccatcggcca gcgcggcacg cttgagaact cggtcaccga
     1681 actcggccag gacgccggct tcttcaagaa gcacgggctg gtgctcgaga tcctctacac
     1741 gcagggcggc ggcgagaccc agcaggcggt gatctcgggc agcgtcgaca tcggcatcgg
     1801 cgtcggcacg cacggcgtgt tcggcgcctt tgccaagggc gcccccgtgc gcatcatcgg
     1861 cgccggcgtc accggcgcca acgatctgtt ctggtacgtg ccggccaact cggtgatcaa
     1921 gagcatcaag gagacggcag gcaagacggt cgcctactcg acgacaggct cgtcgagcaa
     1981 cagcatcgtg cttgcctttc agaagcattt cggcgtggcg ctgaagccgg tcgccaccgg
     2041 cagcccgccg gcgacgttca cccaggtgat gagcggccag attgatgtcg gctgggcgac
     2101 gccgagcttc ggcgtgcagc agggcgacaa gatccgggcg atcgcgcgcg gcggcgacgt
     2161 gccggatttc cgcgaccaga cggtgcgcgt gacaatcgcc aatgccggag ccctcgagca
     2221 gcgcaaggac gccttcgtgc gctacatgcg cgcctaccgc gagacgctcg actggcttta
     2281 tgccgacccg gccgcgatca agccggcggc cacgtggacc ggcatgcccg agagcgcggt
     2341 ggcgcgggtg cgcgacgaat actatcccaa ggactcggtc gatcccgaca agatctccgg
     2401 cgtcgacaag atcaccaccg acgccatcgc cttcaagttc ctggccgcgc cgctgtccaa
     2461 ggagcagctg gaacagctga tccaggtgcc gctgaagtga cggcgaacgt ccagtaacct
     2521 tggccgaagc acgcgggccg atgcgctcgc gccgggcacc gtgatgggct agcgtgacgg
     2581 ccacgagacc acagctgagg ctccggccaa agggccggat ggaggaaatc atgcaatctg
     2641 ctcctgacgc ggcaaccacg gccaaacggc aggaatttta cgagcggctg gggccgcgca
     2701 acctcgcccc gctctgggag gtgctcaagg gtctggtgcc gcgcgagccc aagtccaagg
     2761 cggtgccgtt tcagtggcgc tatgacgagg tgcgcccgct gctcatcgaa tccggctcgc
     2821 tgctcacggc cgaggaggcg gagcggcgcg tgctcgtcct cgagaacccg gcattcgtcg
     2881 ggcagtcgcg caccacgagc acgatgtatg ccggcatcca gctgatcatg cccggcgaaa
     2941 ccgcgccggc gcaccggcat acgccgtcgg ccctgcgatt catgctggaa ggggagggag
     3001 cgttcacggc ggtggggggc gagcgcacca ccatgcgcga gggcgatttc gtcatcaccc
     3061 cggcctgggc ctggcacgac cacggcaacg aaggcaccgg cccgtgcgcc tggatggacg
     3121 ggctcgacat ccccgtcgtg cagttcttcg agacgatctt ttcggaggaa tacaacgacc
     3181 agcgccaaag cctgagccgc cccgaaggcg acgctctcgc gcgcttcggc cagggcctgc
     3241 tgccgctcgg cgccgagagc cgctacggcc tgacgacgcc gatcttcaat tacccttacg
     3301 agcgcacgcg cgaggcgctg gtcaaggccg ccgccggcga ggagccgaat gcgcatgaag
     3361 ccgtgtcgct gcgctacgcc aacccgctcg acggcggctg ggccatgccg accatc
//
LOCUS       DATAIQ010000918         2024 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_254314, whole genome shotgun sequence.
ACCESSION   DATAIQ010000918 DATAIQ010000000
VERSION     DATAIQ010000918.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2024)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2024)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2024
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_254314"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..148)
                     /locus_tag="VHN20_15115"
     CDS             complement(<1..148)
                     /locus_tag="VHN20_15115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006613870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding protein"
                     /protein_id="HEX2727148.1"
                     /translation="MTRIEQDIGTFDYIIVGAGSAGCVLANRLSADPRHRVLVLEAGG
                     RDRWI"
     gene            complement(537..1967)
                     /locus_tag="VHN20_15120"
     CDS             complement(537..1967)
                     /locus_tag="VHN20_15120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl hydrolase family 79 C-terminal
                     domain-containing protein"
                     /protein_id="HEX2727149.1"
                     /translation="MSDFAGLLCRRAVIAGAASSAALSVAWSRAVAQDAARVHVAVGP
                     DAPGRRVPADFIGLSYESAILATNYFSPRNRSVVGLLRTLGGTGVLRIGGNTSDRTVW
                     HAGQNALPLRDIYVITPAIIDELAACVRALGWRLIYGLNLGNGTPEDAAGEAAYVALA
                     LGPQLLAFQIGNEPDGFAAWSGMRAPGYDVSAFVAEWRAFADAVRMRVPDAPFAGPAV
                     ASEAHWIAPFADAVGGRIVLLTRHYYADGPARAPHVSVSRLLRSAPQLKPLLDDVQAV
                     AERHRLPYRISETNSVFAEGHPGVSDTLAAALWGLEFMFQVAEAGGAGVNFHAGDHKF
                     YTPIGLGAGDGRRAQPLYYGMLMFREAGPGALVPARVTPAAIDLSAYAVRADDGTLRV
                     CLINKDVARAVRALIDPGRETGTASLLRLTGQAPEAKDVALGGATVGDLGAWTPLAHE
                     AVEREGRRVLVELPPASALLLSLTAA"
BASE COUNT          330 a          701 c          714 g          279 t
ORIGIN      
        1 agatccaacg gtcgcgcccg cccgcctcca gaaccaggac ccggtgccgc gggtcggcgg
       61 acagccggtt ggccagcaca cagcccgccg agccggcccc gacgatgatg tagtcgaacg
      121 tgccgatgtc ctgttcaatg cgcgtcatgg ccccgacgat ggcaagtccg ctgcggcaag
      181 ggaagggggg caatgtcgac gatgtgggcg agcgctggga gcacgctgat cgcccggcgg
      241 gcccttctga tagtatcggg gccgctttcg acctgccgcc acgtcaccgg ccgcgtaatc
      301 gggaaaaccg ggccacgcgc tcggcgacca ggcgccgcgc gccgtcgtgc tgcggccgtt
      361 gcggaggtga ttgaggaaga tcgaatcgca gcgttgcccg ggttggcact gagcgcgtgg
      421 cggccgggat ctgtcgccgc gaggcgctgc acgatgccac gcgccccgga tgcgttctca
      481 aggcgctcgc cccatctgac cttcgccggc cgcggcggcg gatcgcgggc gatagctcag
      541 gcggccgtga gcgacaggag cagggcgctg gctggcggca gttccacaag aacgcggcgg
      601 ccctcccgct cgaccgcctc gtgcgcaagc ggcgtccacg cgccgagatc gccgacggtg
      661 gcgccgccca gggcgacgtc cttcgcctcc ggagcctgac cggtcagccg cagcaacgac
      721 gctgtcccgg tctcgcggcc gggatcgatc agggcgcgca cggcgcgcgc cacgtcctta
      781 ttgatcaggc agactcgcag cgtgccatcg tcggcgcgca cggcgtaagc actgaggtcg
      841 atggctgcgg gcgtgacccg ggccggaacg agtgctccag ggccggcctc acggaacatc
      901 agcatcccgt aatagagcgg ctgcgcacgc cgcccgtcgc cggcgccgag cccgatcggc
      961 gtatagaatt tgtggtcgcc cgcatggaag ttgacgccgg cgccgcccgc ttcggcaacc
     1021 tggaacatga attcgagccc ccaaagcgcc gccgcgagcg tgtcgctgac gcccggatgc
     1081 ccctcggcaa acaccgagtt ggtctcgctg atgcgatacg gcagccggtg acgttcggcg
     1141 acggcctgca cgtcgtcgag gaggggcttt agttgcggcg ccgaacgcaa cagtcttgac
     1201 acgctgacat gcggggcccg cgccggaccg tcggcgtagt agtgccgcgt cagcaggacg
     1261 atgcggccgc cgacggcgtc cgcgaatggt gcgatccaat gcgcttccga ggcgaccgcc
     1321 ggcccggcga agggcgcatc cggcacgcgc atgcggacgg cgtcggcaaa ggcgcgccac
     1381 tcggcgacga acgccgacac gtcgtagccc ggggcgcgca tgcctgacca ggctgcgaat
     1441 ccgtcaggct cgttgccgat ctgaaacgca agcagctgcg ggccgagtgc cagcgccacg
     1501 tacgctgcct cgccggcggc atcctcgggc gttccattgc cgagattgag gccgtagatc
     1561 agccgccagc cgagggcgcg aacgcatgcg gcgagctcgt cgatgatcgc aggcgtgatg
     1621 acgtagatgt cgcgcaacgg cagcgcattc tggccggcat gccagaccgt ccggtcgctg
     1681 gtgttgccgc cgatgcggag aacccccgtg ccgcccaagg tgcgcagcag accgacaacg
     1741 gagcggttgc gcggcgagaa atagttcgtc gcgaggatcg ccgattcgta gctgagcccg
     1801 atgaaatccg ccgggacccg ccggcccggc gcatcgggac ccacggcgac gtggacgcgc
     1861 gctgcgtcct gagcgacggc acgactccag gcgacggaca gggccgcgct gctcgcggca
     1921 cctgcgatga ccgcacggcg gcacagcagc cctgcgaaat cggacatgac catttccgtc
     1981 cttcggtcag gccgagccac gtccttgttc atccagtcta acac
//
LOCUS       DATAIQ010000919         2001 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_161204, whole genome shotgun sequence.
ACCESSION   DATAIQ010000919 DATAIQ010000000
VERSION     DATAIQ010000919.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2001)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2001)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2001
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_161204"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2001
                     /locus_tag="VHN20_15125"
     CDS             <1..>2001
                     /locus_tag="VHN20_15125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015932562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEX2727150.1"
                     /translation="GVGTAQAYRISIVEDISERKAAEEAQRARTAELETLVDTAPVAV
                     WFTHSRNLGEVRANRYGSELLGLPRVYSQARLGNGPMGSVELHVSKNGARLSPEEYPL
                     ARAARGEEVRDEEFEITLQGGRAVTLLFNSCPLRDATGEVTGAISTAVDVTQRKAMEA
                     ALREREARLQSILDTVPEALITIRKDGAIESFSRSAETLFGYTADEVIGQNVNMLMPS
                     PYREEHDGYLERYLRTAEKRIIGIGRVVSAQRKDGSVFPMELAVGEVIVGGEQLFTGF
                     IRDLTSNRKIEQELRQAQKMEAVGQLTGGVAHDFNNLLNVILGNLEMLELGMDDPGQL
                     ELLREARETAEHGAELTDRLLAFGRRQPLDPRLTDVGALLSQVTPMLRRTLGENISVK
                     ARTDADLWKVEVDPGQLQNAILNLAINARDAMPAGGKLIITAENAQLDPDYARLHPEV
                     RAGRYVLIAVTDTGTGMSKDVLERAFEPFFTTKEVGEGSGLGLSMVYGFAKQSRGHVV
                     IYSEPGHGTTVRIYIPRAHQDEEAGEVRQPEAKPNALRGRGETVLVVEDDTRVRRMTV
                     ARLQRLGYRVLEAPHGPAGLACLDQNPDVDLLLTDIVMPGGMSGTDLAAQARSLRPDL
                     QVVFMSGYAEPDVVRQGQMAGSAWLKKPHTAAALAQTLRSALD"
BASE COUNT          380 a          654 c          668 g          299 t
ORIGIN      
        1 ggggtcggga cggcgcaggc ctatcggatc tcgatcgtcg aggacatcag cgaacgcaag
       61 gcggccgagg aagcgcaacg ggcgcgaacg gccgagctgg agacgctcgt cgacaccgcc
      121 cctgtcgccg tgtggttcac ccacagccgc aacctgggcg aggtcagggc gaaccgctat
      181 ggctcggagt tgctcggtct cccgcgcgtc tatagccagg cgcgcctagg gaacggcccg
      241 atgggcagcg tcgagctgca tgtcagcaag aacggcgcac ggctttcgcc ggaggagtat
      301 ccgctggcgc gggccgcacg cggggaagag gtcagggacg aggagttcga gatcacgctc
      361 cagggcggcc gcgcggtcac gctgctgttc aattcctgtc cgcttcgcga cgccacagga
      421 gaggtcacgg gagcaatctc cacggccgta gacgtcacgc aacgcaaagc catggaggcg
      481 gcccttcgcg agcgcgaggc gcgtctccag tccattctcg acacggtgcc cgaagccctc
      541 atcacgatcc ggaaggacgg cgccatcgaa tccttcagcc gctccgccga aacgctgttc
      601 ggctacaccg ccgacgaggt catcggacag aatgtcaata tgctgatgcc gtcgccctac
      661 cgcgaggagc acgacggcta tctggagcgc tatctgagga cagcggagaa gcgcatcatc
      721 ggcatcggcc gggtggtcag cgcgcagcgc aaggacggca gcgtcttccc gatggaactc
      781 gcagtcggcg aggtgatcgt tggcggagag cagttgttca ccggcttcat ccgcgacctc
      841 acctcgaacc gcaagatcga gcaggaactc cggcaagccc agaagatgga ggctgtgggc
      901 cagctcacgg ggggcgtcgc acacgatttc aacaacctgc tgaacgtcat cctcggcaac
      961 ctcgagatgc tggagctcgg gatggacgac ccgggtcagc tcgaactgtt gcgcgaggcg
     1021 cgcgagaccg ccgagcacgg cgccgagctc accgatcgcc tgctggcctt tgggcgccgc
     1081 cagccgctcg atcccaggct tacggatgtg ggcgccctgc tttcgcaagt cacccccatg
     1141 ctgcgccgaa ctctcggcga aaatatcagc gtgaaagcaa ggaccgatgc cgacctctgg
     1201 aaggtcgagg tcgatccagg ccagctgcag aacgcgatcc tcaatctcgc cataaacgcg
     1261 cgagacgcga tgcccgccgg cggcaagctg atcatcaccg cggagaacgc gcagctcgat
     1321 ccagactacg cacgtctgca cccggaagtc cgggccggac gctacgtgtt gatcgccgtg
     1381 accgacacgg gcaccgggat gtcgaaggac gtgctggaac gcgcattcga gccgttcttc
     1441 acgaccaagg aagtcggcga agggagcggc ctcggtctct ccatggttta tggattcgcc
     1501 aagcagtcgc gtggccatgt ggtcatttac agcgagccgg gccatggcac gacggtcagg
     1561 atttacatcc cgcgtgccca tcaggacgag gaggcgggcg aggtccgcca gccggaagcg
     1621 aaaccgaatg cgctccgcgg acgtggcgag accgtgctcg tcgtcgagga cgacacgcgc
     1681 gtgcggcgca tgacggtcgc ccgccttcaa cgcctcggtt accgcgtgct tgaagcgccg
     1741 cacggtccgg caggcctcgc ctgcctggac cagaatccgg atgtcgatct gctgctcacc
     1801 gacatcgtca tgccgggcgg aatgagcggc acggacctgg cggcgcaggc ccgtagcctg
     1861 agaccggacc tgcaggtcgt cttcatgtca ggctatgccg agccggacgt ggtgcgccag
     1921 ggccagatgg ccggctccgc ctggctgaag aagccccata ccgccgccgc gctcgcgcaa
     1981 acgctcaggt cggctctcga c
//
LOCUS       DATAIQ010000920         6455 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_208701, whole genome shotgun sequence.
ACCESSION   DATAIQ010000920 DATAIQ010000000
VERSION     DATAIQ010000920.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 6455)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6455)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6455
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_208701"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(158..844)
                     /locus_tag="VHN20_15130"
     CDS             complement(158..844)
                     /locus_tag="VHN20_15130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX2727151.1"
                     /translation="MHTTLATTAAVLADAVHFPVAPITRPARGTASPAPGATRRLGKD
                     EEVFGEGDRAAYFYKVVSGAVRTSKLLSDGRRQIDAFHLSGDIFGIESGDEHRFSAEA
                     VGDAAVVVYRRCALDTLASQEGTFAREILAAMMRSLERAQEHMLLLGRKSALEKIASF
                     VLDMAERSGDDVIELPMSRTDIADHLGLTIETVSRSLTELERKGLIALPAQRRTIRLR
                     DKAALEHLRA"
     gene            complement(1079..2011)
                     /locus_tag="VHN20_15135"
     CDS             complement(1079..2011)
                     /locus_tag="VHN20_15135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019403672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-phosphofructokinase family hexose kinase"
                     /protein_id="HEX2727152.1"
                     /translation="MTLTLNPAIDGAAEAEEVRPIRKVRTWGERYDPGGGGINVARVV
                     QELGGDAFAIYLSGGTTGPVLDALVRAAGIESRRIAIAGHTRISHTVHERSSGLEFRF
                     VPEGPSVTPQEWQACLAALEGIDCEYLVASGSLPRGAPADFYVSVAEIAQRKRAKLVL
                     DTSGEALRRAAAHGVHLIKPSLGELEDLIGRKLPDPADQERAVRGLVESGAAEIVALT
                     LGRDGALLGTAKGLRRLAGIKVEPKSAVGAGDSFLAAMTLGLAQARSPEEAFALGVAA
                     GTAAVLTMGTELCRRDDVERIYDELKGIGSGPTH"
     gene            complement(2070..4889)
                     /locus_tag="VHN20_15140"
     CDS             complement(2070..4889)
                     /locus_tag="VHN20_15140"
                     /EC_number="7.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015932566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015662 - P-type ion transporter activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0019829 - ATPase-coupled monoatomic cation
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0043169 - cation binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation-translocating P-type ATPase"
                     /protein_id="HEX2727153.1"
                     /translation="MTSLRDLDDRTAVVDGREPYRLRVNDVLGMLRTDGQSGLRGAEA
                     QERIKRYGNNELAPDKPMPAWRKFLTQFTDILVILLLIAALVSGLLWVFERESALPYE
                     AIAIFGIVLLNAVMGYVQQARAEQAVAALRQMTAAQAKVIRDGARQSVPAAELVLGDI
                     ILIEEGDTVPADARLIQSTSLQVAEAALTGESQPVMKNIEPILEAKPLGDRHNMVFSG
                     TAASYGRGRAVVTATGMRTEMGRIAGLLTGAPDQDTPLQKELDRVGKVLGASVVVIAV
                     VMVTAILALEEFSGFSAVFDVLILGVALAVAAVPEGLPAVVTAVLSLGVQRMAKRRAI
                     IRNLSAVETLGSADVIASDKTGTLTRNEMAVRVVVTASGRVSFGGSGYEPNGDVRRPD
                     GEPISGSLRSELTRALVAADRANNAVLQEIDGRWTVQGDPTEGALIVAARKAGLPADA
                     LDARFARVAEVPFSSERKLMSTVHTDAERGEILRALTKGAPDVLLARCSHELAGEDAR
                     PLTDQRRSEILRQNEELAGEALRTLAVAFRSLPKETCRGKPLGEGVEHDLVFLGLIGM
                     IDSPRAEARAAVGRARRAGIRPIMITGDHPRTAAVIAAELGIATDGRAITGAELATMP
                     DEALDRAVREVSVYARVNPEHKLRIVSALQRDGMTVAMTGDGVNDAPALKTADIGIAM
                     GVTGTDVSKQAADMVLADDNFATIVAAVEEGRAIFSNIRKFLRYLLSSNIGEVMTMFF
                     GLLAADIIGMTGAGSHSGVVLPLLATQILWINLVTDGAPALALGVDPAGRGIMDQPPR
                     RRGEGVITRRMWAGIFLVGLVMAAGTLLVLDASLPGGLIDGSGTLRYAQTMAFTTLTM
                     FQLFNVFNARSDERSAFDGLFRNHWLWAAVGLSLMLHVAVIYVPFLQEAFSTTNLSPS
                     DWLLCAGVASSVLWLRELSKLLTRR"
     gene            5886..>6455
                     /locus_tag="VHN20_15145"
     CDS             5886..>6455
                     /locus_tag="VHN20_15145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015950287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0051276 - chromosome organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="terminase small subunit"
                     /protein_id="HEX2727154.1"
                     /translation="MDTEPAATRLREITKKQQRFVDEDVLDRNATQAAIRAGYSPRGA
                     QQTGSRLKRHERVGAAIRERLGDAPDAWRPDPTPLQQRLVHEFLRGLDVRQAAIRAGY
                     KPDSASKLASQMRRHKEDGAGIRKLLRPGTAAHAPPAAHAAAAPPAGGWQPRAYQKPV
                     WDYFKGGGKRAVCVWHRRAGKDEFCLHLAA"
BASE COUNT         1075 a         2157 c         2117 g         1106 t
ORIGIN      
        1 gggcatcagc ctgcatggcc agcgaaactc cgtagtcaag agccgacgac cggccggatt
       61 cgtcggcgcc gaagccgatc atgatgctct tcacgttttg taaagtcatg gcaacctcca
      121 cgagataacg atcgtcggat atgtctgtct gaaccgtcta ggcgcgcagg tgctccaggg
      181 ccgccttgtc gcgcaggcgg atggtgcggc gctgggcggg gagggcgatc agccccttgc
      241 gctcgagctc cgtgagcgag cgcgatacgg tttcgatcgt gaggccgaga tggtcggcaa
      301 tgtccgtgcg cgacatcggc agctcaatga cgtcatcgcc ggagcgttcg gccatgtcga
      361 gcacgaagct ggcgatcttc tcgagggccg acttgcgacc gagcagcagc atgtgctcct
      421 gcgcgcgttc gagggagcgc atcatagcgg cgagaatctc gcgggcgaag gtgccctcct
      481 gggaggccag cgtatcgagg gcgcagcgcc gatagacgac cacggcggcg tcgccgaccg
      541 cctccgccga gaagcggtgc tcgtcgcccg actcgatgcc gaagatgtcg ccggagagat
      601 gaaaggcgtc gatctggcga cggccgtcgc tgagcagctt gctcgtgcgc acggcgccgg
      661 agacgacctt gtagaaatac gcggcacggt cgccttcgcc gaagacctcc tcgtccttgc
      721 cgaggcggcg ggtggcgccg ggggcagggc tggcggtgcc ccgggccggc cgggtgatcg
      781 gcgccaccgg aaaatggacg gcgtctgcga ggaccgcggc ggtcgtggcg agtgtggtgt
      841 gcatcggagt ctcgtgagca agtcgctgaa cccgatccca tcagtacgcc cgcacggcac
      901 agccgaaaat tcagatgatt tgcctaaggg attccccgga ggttgccggg gcgagttccg
      961 gcggcgcacg ggctaacgct taataatttg tgctcttgag ctgtggcagt cccgttcatg
     1021 gttattgtcg tggcgcacgt cgagcagcga tgatccgcag tgggagcttg gatgccgctc
     1081 aatgtgtcgg gccggaaccg atccccttga gctcgtcata aatgcgttct acgtcgtcgc
     1141 gccggcagag ttctgtgccc atcgtcagga cggcggccgt tccggctgcg acgccaaggg
     1201 caaacgcctc ctccgggctc cgcgcttgcg caaggcccag cgtcatcgcg gcgagaaagc
     1261 tatcacccgc gcccacggcg ctcttcggct cgaccttgat cccggcgagc ctgcgcaatc
     1321 ctttcgcagt ccccagcaac gcgccgtccc ggccgagagt gagagcgacg atctcggccg
     1381 cgccagactc gacgaggccc cgcacggcgc gttcctgatc agctggatcg ggaagcttcc
     1441 gcccgatcag gtcctccagt tctccgaggc tcggcttgat gagatggacc ccgtgggctg
     1501 cggccctccg gagagcctcg ccggacgtat cgaggacgag cttggcgcgt ttccgctgcg
     1561 cgatctcggc gacgctcacg tagaagtcgg ccggagcgcc gcgagggagg ctgccgctgg
     1621 cgaccaggta ctcacagtcg atcccctcca gggccgcgag gcacgcctgc cattcctgcg
     1681 gcgttacgga cggcccctcg gggacaaagc ggaattcgag gccgctcgac cgctcatgga
     1741 cggtgtggct gattcgggtg tggcctgcga tggcgatgcg ccggctttcg atgccggcag
     1801 ccctcaccag cgcgtcgagc acggggccgg tcgtgccccc tgacagatag atggcgaaag
     1861 cgtcgccgcc gagctcctga accacgcggg cgacgttgat gccgccgccg cctggatcgt
     1921 agcgctctcc ccatgtccgg accttgcgga tggggcggac ctcctcggcc tctgccgccc
     1981 cgtcgatggc tgggttcagc gtcagggtca caattggctt catgacgatc ctcttccacg
     2041 ttgacgcagc gcacggcccg gctggggcct catctgcgcg tcaggagctt gctgagctct
     2101 cgcagccaca gcaccgagct tgcaaccccg gcgcacagca gccagtcgct cgggctcagg
     2161 tttgtcgtgg agaacgcttc ctggaggaac ggcacgtata taacggcaac gtgcagcatc
     2221 agggacagtc cgactgccgc ccagagccaa tgattgcgga aaaggccatc gaatgcgctc
     2281 cgctcgtcgg accgtgcgtt gaacacgttg aagagctgga acatcgtcag cgtggtgaac
     2341 gccatcgtct gcgcgtaacg gagcgtgccc gaaccgtcga tcaggccgcc gggcagggag
     2401 gcatcgagca ccaggagcgt cccggccgcc atgacaaggc cgaccaagaa gatgcccgcc
     2461 cacatgcggc gcgtgatcac gccttcgccg cgccggcgcg gcggctggtc catgatccct
     2521 ctgccggcgg ggtcgacgcc cagggcgagc gccggcgccc cgtcggtgac gaggttgatc
     2581 cataggatct gggttgccag cagcggaagc acgacgccgc tgtggctgcc ggctccggtc
     2641 atgccgatga tgtcggccgc gagcaggccg aagaacatcg tcatcacctc gccgatgttg
     2701 gacgacagca ggtagcgaag gaacttcctg atgttcgaga agatcgcccg gccttcctcg
     2761 acggctgcga cgatggtcgc gaagttgtcg tccgcaagca ccatgtctgc ggcttgcttc
     2821 gacacgtccg tgccggtgac gcccatggcg atgccgatgt cggcggtctt gagcgcgggc
     2881 gcgtcgttga cgccgtcccc cgtcatggcg actgtcatgc cgtcgcgctg cagggcgctg
     2941 acgatgcgca gcttgtgctc tggattgacc cgcgcgtaga ccgacacctc ccggaccgcg
     3001 cggtcgaggg cctcgtccgg catcgtcgcg agttccgccc ccgtgatcgc gcggccgtct
     3061 gtcgcgatgc ccagctccgc ggcgatgacc gcggctgtcc tcgggtggtc tccggtgatc
     3121 atgatcgggc ggattccggc gcgcctggcg cggccgaccg cagccctcgc ttcggcgcgc
     3181 ggcgaatcga tcatcccgat caaccccagg aacacgagat cgtgctccac gccttcgccc
     3241 aggggcttgc ccctgcatgt ttctttcggg agcgagcgga aggcgacggc cagcgttcgc
     3301 agcgcctcgc ccgcgagttc ctcgttttgt ctgaggattt cggaacggcg ctggtccgtc
     3361 agaggccggg cgtcttcgcc ggccagctcg tgcgagcagc gcgccagcag gacatccggt
     3421 gctcctttgg tcagcgcgcg caggatctcg ccacgttcgg catctgtgtg caccgtgctc
     3481 atcagcttcc gctcggatga gaacggcacc tccgcgacac gggcgaagcg cgcgtcgagc
     3541 gcgtcggccg gaagtcctgc cttgcgggca gccacgatga gggcgccctc ggtcggatcg
     3601 ccttgcactg tccagcgtcc atcgatttcc tgcagcacgg cgttgttggc gcggtccgcg
     3661 gcgacgaggg cacgcgtcag ttccgaccgc agcgaaccgc tgatcggctc gccgtcgggt
     3721 ctgcgcacgt caccgttcgg ctcgtaaccg ctacccccga aactcacacg gccgctggcc
     3781 gtgacgacca cgcgcaccgc catttcgttc ctggtgagcg tgcctgtctt gtcggacgcg
     3841 atgacgtctg cagagcccag cgtctcgacg gcggataggt tgcggatgat cgcacgtctc
     3901 ttcgccatgc gctggacgcc gagcgagagc accgcggtca cgacggcagg cagcccttcc
     3961 ggcacggccg cgaccgcgag cgccacgccg aggatgagga cgtcgaacac ggcggagaag
     4021 ccgctgaact cctcgagcgc gaggattgcc gtgaccatca ccacggcgat gacgacaacg
     4081 ctcgccccga gcaccttgcc gacccggtcc agctccttct gcagcggcgt gtcctgatcc
     4141 ggtgctcccg tcagcaagcc cgcgatccgg cccatctcgg tccgcattcc ggtcgcggtg
     4201 acgacggcgc gtccccgtcc gtaggacgcc gcggtgccgc tgaacaccat gttgtgccgg
     4261 tcacccagcg gcttagcttc caggatcggc tcaatgttct tcataaccgg ctggctctcg
     4321 ccggtcagcg ccgcctcggc cacctgcagc gatgtggact gtatcaggcg tgcgtctgcc
     4381 ggaacggtat cgccttcctc gatcaggatg atgtcaccga gcacgagctc agcggccgga
     4441 acgctctgtc gtgcgccgtc ccggatgacc ttggcttgcg cggccgtcat ctggcgcaac
     4501 gccgccaccg cctgctcggc gcgggcctgc tggacgtaac ccatgacggc gttgagaagc
     4561 acgatcccaa agatcgcgat ggcctcgtat ggcagcgccg attcccgctc gaacacccag
     4621 agcaggcccg atacgagcgc cgcaatcagc aacaggatga ccaggatatc cgtgaactgg
     4681 gtcaggaact ttcgccacgc tggcatgggc ttgtcgggcg ccagctcgtt gttgccgtat
     4741 cgcttgatcc tctcctgtgc ctctgcccca cgtaagccgg actgcccatc agtgcggagc
     4801 atgccgagaa cgtcattgac acgcagccgg tacggctcgc gcccatctac tacagcagtt
     4861 cgatcatcca aatcgcgtaa actcgtcatt gtcctgtcat ccgggcgtgc gatcggtact
     4921 ttatcttgca ccgatggcct gctgatcgct ggcacaaaga ctcgtgtgct caataccacc
     4981 atcatgggta tcggctacac gggttccagc gaacggccga acgtcgggat cccaacagag
     5041 ccggctaccg gagatgattc cgcggcacgg tccttgtctc gggctcgctg gccaagaccc
     5101 gggcgctgcg acacctgctt acgagcgagg atgcgtcgcg ggacgcgcac agcatgttca
     5161 cggcattcgt cgcgctgctt ggcatagcct cgggccggac atgcccgaaa agtccttcgc
     5221 tcaggctatc aggacgcgac cacgatccga ttcgatcgcg gcgtagcccc cacgaaactc
     5281 tgacacaaac acggagggtt tcacgcttgc gagtctaatt gggctcggaa gcgaaatagg
     5341 ttctgcagct tcttgtcccc cgaggaactc caccgttgtt gcttggtatt tgcagcgccg
     5401 gccccaccca ctagtcgcct cgccgtctac gccttcattc ctcgcccgtg accaggaggt
     5461 cgacgagcag gctgagcgca aaaaatcgct cattggtgta ttgcgtttgc agtccgccat
     5521 tggtgcgggg ctggttggcg aacgtgggga acgcggggat ggggcttcca acgcgcgttg
     5581 actggcgcac cgctcgcgtg cactactgaa ttcgatgata cgaattgtgc ccggagccga
     5641 catggctgcc gggttttatt ttgggctgac gcacgctgca cgacaacgtg cgtgcgtctg
     5701 cgtcgcccat ggttctatcc ggttacccag gagaaggatc ccactccttt agagcaggac
     5761 gggcgcttcg acaatcaaca tcatggcccg tgaggcgacg aggaggccaa gcacgccccc
     5821 cgcctacgcg acagccgctc gcgtgaacat ccttccgaga ctcaatcagt gaatcgagca
     5881 tcaagttgga caccgaaccg gccgcaacgc gcttgcgcga gatcacgaaa aagcagcaac
     5941 gcttcgtcga cgaggacgtg ctcgaccgca acgccacgca ggcggcgatc cgcgccggct
     6001 acagtccgcg cggtgcccag cagaccggtt cgcggctcaa gcgccacgaa agggtcggcg
     6061 cggccattcg cgagcgcctg ggagatgcgc cggacgcgtg gcgaccggat ccgacgcccc
     6121 tgcagcaacg cctcgtccat gagtttctgc gcggcctcga cgtgaggcag gcggcgatcc
     6181 gcgccggcta caagccggac agcgccagca agctcgcttc acagatgagg cgacacaagg
     6241 aagacggcgc gggcattcgc aagctcctgc ggccggggac tgcggcccac gcgccgccgg
     6301 cggcgcatgc ggcggcagcg cctccggccg gcggctggca gccgcgcgcc taccagaagc
     6361 ccgtgtggga ctatttcaag ggcggcggca agcgcgccgt gtgcgtgtgg caccgccgcg
     6421 ccggcaagga cgagttctgc ctgcacctcg ccgcc
//
LOCUS       DATAIQ010000921         2773 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_254472, whole genome shotgun sequence.
ACCESSION   DATAIQ010000921 DATAIQ010000000
VERSION     DATAIQ010000921.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2773)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2773)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2773
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_254472"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..868)
                     /locus_tag="VHN20_15150"
     CDS             complement(<1..868)
                     /locus_tag="VHN20_15150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020091775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b N-terminal domain-containing
                     protein"
                     /protein_id="HEX2727155.1"
                     /translation="MSEHATVYVPKSRLAKWFESRLPVASLVHSSFVAFPVPRNLNYF
                     WTTGGILFTILMLQIVSGIVLAMHYVPEATMAFDSVEHIMRNVNYGWLLRYMHANGAS
                     MFFVAVYLHIFRNLYYGSYKAPREILYIIGVIIFVLMMATAFMGYVLPWGQMSFWGAT
                     VITNLFSAIPTIGDTIVSFLWGGYAVGDPTLNRFFSLHYLLPFMIFGAVILHVWALHV
                     PGNNNPTGIPIKSGKDAVPFHPYMTVKDSFAITVFMILFAWWVFYMPNYLGHADNYIP
                     ANPAVTPAHIVPE"
     gene            complement(911..1498)
                     /gene="petA"
                     /locus_tag="VHN20_15155"
     CDS             complement(911..1498)
                     /gene="petA"
                     /locus_tag="VHN20_15155"
                     /EC_number="7.1.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019904974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045275 - respiratory chain complex III
                     [Evidence IEA];
                     GO_function: GO:0008121 - ubiquinol-cytochrome-c reductase
                     activity [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol-cytochrome c reductase iron-sulfur
                     subunit"
                     /protein_id="HEX2727156.1"
                     /translation="MSATATPPGENRATSVPGPGAAEPTRRDMLFLGTGIAGATALAF
                     TAWPFISSLAPDAETVAAGAPVELDLTPIAEGQIVKLFWRGKLIFVRHRTAAEIKAAQ
                     DVDVETLRDPQPDGVRVKEGKPQWLVVYGNCTHLGCVPLGQQGEYKGWFCPCHGSVFD
                     TSGRIRQGPAPINLPIPPYTFVSDAKIRIGEGATA"
     gene            complement(1884..>2773)
                     /locus_tag="VHN20_15160"
     CDS             complement(1884..>2773)
                     /locus_tag="VHN20_15160"
                     /inference="COORDINATES: protein motif:HMM:NF012573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005509 - calcium ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HEX2727157.1"
                     /translation="DNVGDQVFESAGDVNDTILSSISFNLATTPEVEHLTLKGTGNLA
                     GRGNAHDNVISGNSGNNLLLGGDGSDGLHGGGGNDILDGGTGAFDLMTGGAGNDVYRV
                     DSAADIATEGAGASGRDRVESSITFDLDTFDGADIEDLTLTGSGHNDGTGNSLANTLI
                     GNGGNNQLSSRDNNDILIGGLGQDGLTGGAGADLFRYRSILESTPAAPDNINEFVRAE
                     GDRIDLRGIDAISGTPANDAFTFIGTAGFSGVAGQLRYEVTALGFARLIQADVNGDGT
                     ADFAIASNPVDYLASDFIL"
BASE COUNT          451 a          865 c          971 g          486 t
ORIGIN      
        1 attccggcac gatatgcgcc ggcgtcaccg ccgggttggc cgggatgtag ttgtcggcgt
       61 ggccgagata gttgggcatg tagaacaccc accacgcgaa gaggatcatg aacaccgtga
      121 tggcgaagct gtccttcacg gtcatgtacg ggtggaacgg caccgcgtcc ttgcccgact
      181 tgatcgggat gccggtcggg ttgttgttgc ccggcacgtg cagcgcccag acgtgcagga
      241 tcacggcgcc gaagatcatg aacggcagga ggtaatgcag cgagaagaag cggttgagcg
      301 tcgggtcgcc gaccgcgtag ccgccccaca ggaagctgac gatggtgtcg ccgatggtcg
      361 ggatcgccga gaataggttg gtgatgaccg tggcgcccca gaagctcatc tgcccccacg
      421 gcagcacgta gcccatgaag gccgtcgcca tcatcaggac gaagatgatg acgccgatga
      481 tgtagaggat ctcgcgcggc gccttgtagg agccgtaata gagattgcgg aagatatgca
      541 ggtagacggc cacgaagaac atcgaggcgc cgttggcgtg catgtagcgc aacagccagc
      601 cgtaattgac gttgcgcatg atgtgctcaa ccgagtcgaa ggccatcgtg gcctccggca
      661 cgtagtgcat ggccagcacg atgcccgaca cgatctgcag catcaggatg gtgaacagga
      721 tgccgccggt ggtccagaag tagttgaggt ttcgcggcac cgggaacgcc acgaacgacg
      781 aatggaccag gctcgcgacg gggagccggc tttcgaacca tttcgcgagg cggctcttgg
      841 ggacgtagac ggttgcgtgt tcactcatgt tttcgcctga ctgggtaaga cccacgccgc
      901 gggttgatgc ttacgccgtc gctccttcgc cgatgcgaat cttggcgtcg gatacgaagg
      961 tatagggagg aatcggaagg ttgatcggcg ccggcccctg gcggatgcgt ccggacgtgt
     1021 cgaacacgga gccgtggcac gggcagaacc agcctttgta ttcaccctgc tggccgagcg
     1081 gcacgcagcc gagatgcgtg cagttgccgt agaccaccag ccattgcggc ttgccttcct
     1141 tgacgcggac gccgtccggc tgcgggtcgc gcagcgtctc gacatcgacg tcctgcgccg
     1201 ccttgatctc ggcggcggtg cggtggcgga cgaagatcag cttgccgcgc cagaacagct
     1261 tgacgatctg gccttcggcg atcggcgtga ggtcgagctc gacgggcgcg cccgccgcca
     1321 ccgtctcggc gtccggggcg agcgagctga tgaacggcca ggcggtgaag gccagcgcgg
     1381 tcgcccccgc aatgccggtt ccgaggaaga gcatgtcgcg ccgggtcggc tccgctgcgc
     1441 ccgggcccgg gacgctcgtg gccctgttct cgcccggcgg ggtggcggtc gcggatatgg
     1501 ccaatgggct ctccaatatc ttgaaacgta tcgggttcgc gcggacctgt tatccgagcc
     1561 ggacccgggc ggaagctcgg cgacgaagca cacaggtcca cacgcgcgca atgcgacggg
     1621 gagtcgccac gcggcggctg tttcgcatgg cgctgaacgg gtgtccatac ctcggccgcc
     1681 tcggcgcgag ggatgtcaac gggaatgggc gagcgaccgg agcgccgctc cgccgccgcg
     1741 cgcggctgtc gacctggcgc cgcggtccgg tgcaccggcg agccgcagtt ccgctcgctg
     1801 aggcccgtcc cggctcgggg ggacgtcctc gtcgcaggga gccgtccgca tgggcgccgc
     1861 cgcccccatg cgggcttgca cgctcagaga atgaagtccg aggcgaggta gtcgacgggg
     1921 ttgctcgcga tcgcgaaatc agccgttccg tcgccgttga cgtcggcctg gatcaaccgt
     1981 gcgaagccga gcgcggtcac ctcgtagcgc agctgccccg ccacgcccga gaaccccgcg
     2041 gtgccgatga aggtgaaggc gtcgttggcg ggcgtgccgc tgatcgcatc gatgccgcgc
     2101 aggtcgatcc tgtcgccttc cgcgcgcacg aactcgttga tgttgtcagg ggccgccggc
     2161 gtgctctcga ggatgctccg gtagcggaac aggtcggcgc cggctccgcc ggtcagcccg
     2221 tcctggccga gcccgccgat caggatgtcg ttgttgtccc gactggacag ctggttgttt
     2281 ccgccattgc cgatgagggt gttcgccagg gagttgcccg tgccgtcgtt gtgcccgctg
     2341 ccggtgagcg tcagatcctc gatgtccgcc ccgtcaaacg tgtcgaggtc aaaggtgatc
     2401 gagctctcga cgcggtccct gccgcttgcg cccgctcctt cggtggcgat gtcggccgcg
     2461 gaatcgacgc ggtaaacgtc gtttcccgcg ccgcccgtca taaggtcgaa cgcgccggtg
     2521 ccgccgtcga ggatatcatt gccgccgccg ccatggagtc cgtcgctgcc gtcgcccccg
     2581 agcaggaggt tgttgccgct attgcctgag atgacgttgt cgtgcgcgtt gcccctgccc
     2641 gcaagattgc cggtgccctt cagcgtcagg tgttcgacct cgggggtggt cgcgagattg
     2701 aacgagatgg agctcagaat cgtgtcgttg acgtctcccg cggactcgaa cacctggtcg
     2761 ccaacgttgt cga
//
LOCUS       DATAIQ010000922         2120 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_346585, whole genome shotgun sequence.
ACCESSION   DATAIQ010000922 DATAIQ010000000
VERSION     DATAIQ010000922.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2120)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2120)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2120
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_346585"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..535
                     /locus_tag="VHN20_15165"
     CDS             <1..535
                     /locus_tag="VHN20_15165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019403426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase beta subunit-related
                     protein"
                     /protein_id="HEX2727158.1"
                     /translation="IAAWRAAYKGFGIKKTSYRSSVERLVKRVKAGDHLPAVNTLVDI
                     YNAVSLSHVFCCGADDLDKVALPLAFRFSRPGDSFVDMGVEAGEDANDPPKDGEVVYA
                     DARHVLCRRWNWRQDARTGITPATTRAVITVQANGWGDLDAAVADLTTLITRFAAGRC
                     RVAVADASTPDVVVMPG"
     gene            557..1459
                     /locus_tag="VHN20_15170"
     CDS             557..1459
                     /locus_tag="VHN20_15170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012114241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEX2727159.1"
                     /translation="MARESLGLVLGFIAVVLFGGTLPFTRLAVEGLDPWFVTAARAAL
                     AGILAGAVLLVTRRRRPDVAALKRLALVSLCLVVVFPGVTALAMQRVGAAHGGVMLGL
                     LPLATALFGAWLAGERPGWRFWAAAVAGAAVVVAFALREGTGRLQLGDLLLAAAVLSA
                     GFGYALSGQLTLRLKGWEVISWALVIALPLTFPLMILLAPRNPSVVPHASWTGLAYVT
                     LLSQYFGFFAWNAGLALGGIALVSQVQLLQTFVTLLIAAALNGEQVDALTWMAAVVVV
                     SLVLIGRKAARRPAPRSPPSQGVA"
     gene            1592..>2120
                     /locus_tag="VHN20_15175"
     CDS             1592..>2120
                     /locus_tag="VHN20_15175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015931406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HEX2727160.1"
                     /translation="MTDAALGLDDTLTTLRAAAEETRLRILALLAEGELTVSDLTDIL
                     GQSQPRISRHLKLLVGAGLVERHREGAWAFFRLAEQGAAAVLRPILATVDRADPRVAA
                     DGERLAAVRQQRAEAAQEFFARLAPEWDRLRSLQAPEALVESAILDALGTKPIHNLLD
                     LGTGTGRILQLLGPRA"
BASE COUNT          266 a          728 c          738 g          388 t
ORIGIN      
        1 catcgccgcc tggcgcgcgg cctacaaggg cttcgggatc aagaagacga gctatcggtc
       61 gtccgtcgag cgcctcgtca agcgcgtcaa ggcgggcgat cacctgcctg ccgtcaacac
      121 gctggtcgac atctacaacg ccgtctcgct cagccacgtc ttctgttgcg gcgccgacga
      181 tctcgacaag gtggcgctgc cgctcgcgtt ccgcttttcg cgcccgggcg acagtttcgt
      241 cgacatggga gtggaggccg gtgaggatgc gaacgatccg ccgaaggatg gcgaggtcgt
      301 ctatgcggat gcgcggcacg tcctgtgccg gcgctggaac tggcggcagg acgcccgcac
      361 cggcatcacg ccggcgacga cgcgggcggt catcacggtg caggccaacg gttggggcga
      421 tctcgacgcg gcggtcgcag acctcaccac gctgatcacg cgctttgccg ccggcaggtg
      481 tcgggtcgca gtcgcggacg cgtcgacgcc cgacgtcgtg gtgatgccgg gctgatcgcg
      541 gtcggcggga actgccgtgg cgcgcgaatc cctcggcctg gtcctcggct tcatcgccgt
      601 ggtcctgttc ggcggcacgc tcccgttcac gcgtctcgcc gtcgagggcc tcgacccgtg
      661 gttcgtgacg gcggcgcgcg ccgccctcgc cgggattctg gccggggcgg tgctgctggt
      721 cacccgccgg cgccgtccgg acgtggcggc gctcaagcgg ctcgcgctcg tttccctgtg
      781 ccttgtcgtg gtgtttccgg gcgtcacggc gctcgccatg cagcgcgtcg gcgcggctca
      841 tggcggcgtc atgctcggcc tcctgccgct ggccacggcc ctgttcggcg cctggctggc
      901 cggcgagcgg ccgggatggc ggttctgggc ggcggcggtc gccggggccg ccgtggtcgt
      961 cgcgttcgcg ttgcgggagg gcacgggccg cttgcaactc ggcgatctgc ttctcgcggc
     1021 ggcggtactg agcgcgggct ttggctatgc gttgtcggga cagctcacgc tccgcctcaa
     1081 gggctgggag gtgatttcct gggcgctcgt catcgcgttg ccgctgacat tcccgctgat
     1141 gatcctgctc gccccgcgca atccgagcgt ggttccgcac gcgagctgga ccgggctcgc
     1201 ctacgtgacg ttgctgagcc agtatttcgg tttcttcgcc tggaatgccg ggcttgccct
     1261 cggcggcatc gccctggtga gccaggtgca gctattgcag accttcgtga cgttgctgat
     1321 cgcagcggcg ctcaatggcg agcaagtgga tgccctgacc tggatggcgg ccgttgtggt
     1381 tgtctcgctc gtgctgatcg ggcgcaaggc agcccggcgc ccggccccga gatcgccgcc
     1441 cagccagggc gtcgcctaac cgcttgtaag gccatcaata tcgcgttcag tttgcacctt
     1501 tttcccagga caacgtcccg gccatggcct tgccaagaac tgccttgaga tataaagata
     1561 tctttatatg tattctgata tggttcgagg catgaccgac gccgcccttg gcctggacga
     1621 taccctgacc accttgcggg ccgccgccga ggaaacccgg ctgcgcatcc ttgccctgct
     1681 ggccgaaggc gagctgaccg tctccgacct caccgacatc ctgggccagt cgcagccgcg
     1741 gatctcgcgc catctcaagc tcctcgtcgg ggcggggctg gtcgagcgtc accgcgaagg
     1801 tgcctgggcc tttttcaggc tcgcggagca gggggccgcc gccgtgctgc gtcccatcct
     1861 cgccaccgtc gatcgcgccg atccgcgcgt cgccgccgat ggcgagcggc tcgcggccgt
     1921 tcgccagcag cgggcggagg cggcgcagga gttctttgcc cggcttgcgc ccgaatggga
     1981 ccggctgcgc tcgctgcagg cgcccgaggc gctggttgaa agcgcgatcc tcgacgcgct
     2041 cggcacaaag ccgatccaca acctgctcga cctcggcacc ggcacgggac ggatcttgca
     2101 actgctcggc ccgcgcgcgg
//
LOCUS       DATAIQ010000923         3282 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_208853, whole genome shotgun sequence.
ACCESSION   DATAIQ010000923 DATAIQ010000000
VERSION     DATAIQ010000923.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3282)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3282)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3282
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_208853"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            22..654
                     /locus_tag="VHN20_15180"
     CDS             22..654
                     /locus_tag="VHN20_15180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011504300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trimeric intracellular cation channel family
                     protein"
                     /protein_id="HEX2727161.1"
                     /translation="MFETVTMGLDWLGVIAFAITGSLVASRKQMDIVGFTLLGTVTGI
                     GGGTVRDVLLGAPVFWVRHPAYLVTCVLISGVVFFTAHIPQSRYRFLLWLDAIGLALF
                     AVAGAEKASHAGADPIVAVAMGVITATFGGIIRDLLGGESPVILRREIYASAALAGAV
                     VFTSLMTIGTPRELAVASGFAVGLLIRAAALHYGWSLPRYRPRPGMPYDG"
     gene            complement(860..1696)
                     /locus_tag="VHN20_15185"
     CDS             complement(860..1696)
                     /locus_tag="VHN20_15185"
                     /inference="COORDINATES: protein motif:HMM:NF020090.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HEX2727162.1"
                     /translation="MTPSVAMSPRITGGTRLLGFIGDPVIHARSPQNFNPRIAAAGQN
                     AVLVPMHLLPDDFDAAIDALMTIANLDGLVVTMPFKERIIPKLGEISTRARAVGAVNA
                     AKRTSEGRWVGDIFDGVGLLGAVKSLGVDPRGYAVGLIGAGGAGAAIAFALAEAGVDS
                     LAITDQQSDRAARLAERVGDIGSLKPVAGNFDLHGLDLLINATPVGMSPGDGIAIDVE
                     RLSGRTVVVDIVTKPSTPLLEEAARRGCRHVGGAAMVAAQTDAMLRFFDLGNCGSVSG
                     DS"
     gene            complement(1744..2817)
                     /locus_tag="VHN20_15190"
     CDS             complement(1744..2817)
                     /locus_tag="VHN20_15190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014492552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEX2727163.1"
                     /translation="MARLRKPHNGADAAPAAGAGPRSVGLREVARAAGVSTASVSRAI
                     NHPDVVSPDLRDRIAAAVKELGWVPDGAARALSTRRSQTIGAVFPTLSVGDFARATHA
                     IQSELSEAGYTLLLACSEYDLDLELQQVRKFVERGVDALILVGQAHHPELEPLLAQRR
                     MPFVNTFVYHPETHDTCIGPDNHKALVMMTDYLADLGHVRFAVIAQSTRNNDRASARL
                     EGLRHALALRGLAVRPQHFAIGEWTIAEGRALFRRLMQTEPKPTAVVCGNAHLAVGAV
                     LEAISMGIRLPDELSIVGYDDIEIMSHLPVPVTTVRVPSAEIGRTAARVLIARLEGRD
                     HLTSHESQAELVIRASSGPPPLD"
     gene            complement(2863..>3282)
                     /locus_tag="VHN20_15195"
     CDS             complement(2863..>3282)
                     /locus_tag="VHN20_15195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727164.1"
                     /translation="LDTSRTICAVADSRGLGDGAFIATLRLGARVDRASFLRAVRGDV
                     IAALLDQPSIVAVHLLEGQGGVDGGPSAEKALRGQPDQTADWILLIEAADAPPLEDVL
                     AGPASARALAAAGARYDEVRDCGIYRLQSGVSHDQLA"
BASE COUNT          522 a         1098 c         1108 g          554 t
ORIGIN      
        1 ctgcaattcc ggaggaacct catgttcgag actgtcacga tggggctcga ctggctcggc
       61 gtgatcgcat tcgcaatcac ggggtcgctc gtcgcctcgc gaaagcagat ggacatcgtc
      121 ggctttacct tgctcgggac cgtgacggga atcggcggtg gcacggttcg cgacgtcctg
      181 ctcggagcgc ccgtgttctg ggtgcgccac cccgcttatt tagtcacttg tgtgctgatc
      241 tccggggtcg tgttcttcac cgcccacatc ccgcagtcgc gctacaggtt cctgctctgg
      301 ctggatgcga tcggcctcgc attgttcgcg gtcgcgggcg ccgagaaggc atcgcacgca
      361 ggggcagacc cgatcgtagc cgttgcgatg ggggtgatca cggcaacttt cggcgggatc
      421 atacgcgacc tcctgggggg cgagagcccg gtgatcctgc gccgggaaat ctacgcctcg
      481 gcggcgctcg ccggagcggt cgtcttcacg tctttgatga ccatcgggac accgcgcgag
      541 cttgcggtcg cgtcgggctt cgcggtcggg ctgctcatcc gagccgcggc tctccactac
      601 ggctggtcgc ttccccgcta tcggccgcgc cccggcatgc cctacgatgg ctagggcgag
      661 gtcggcgaac ggcgaagccc ctcacaacga gggtgacaag agccttgcga cagagtctcg
      721 gaagcgcaag gcgacgttgt agcgttcatg ctccccggaa tcgaagtccg tcagtcgacc
      781 cgtccgctgc gaaaggcatt ccccatttgc cgtagagcac cgcgttgcgt tcgtagttga
      841 gtggtgcatc cggcagtgat caagagtcgc cggagacgct cccgcagttc ccgagatcga
      901 agaagcgcag cattgcgtcc gtctgtgccg cgaccatcgc cgctccaccg acgtggcggc
      961 agccgcgtct cgcggcttcc tccaggagcg gagtcgaagg ctttgtcacg atatcgacga
     1021 cgacggtccg gcccgagagg cgttcgacat cgatcgcgat gccgtcgccc ggcgacatgc
     1081 cgaccggcgt tgcgttgatc agcaggtcaa gcccgtgcag atcgaagttt cccgcgacag
     1141 gcttcagcga gccgatatcg ccgacgcgtt ctgccaggcg ggcggccctg tcactttgct
     1201 ggtccgtgat cgccaggctg tccacaccgg cttcggcgag cgcgaaggcg atcgcggcgc
     1261 cggcaccgcc ggccccgatc aacccgacag catacccgcg cggatcgacg ccgaggctct
     1321 tgaccgcgcc gagcaggccg acgccatcga agatgtcgcc gacccaccga ccctcgctcg
     1381 ttcgcttcgc cgcattgacc gcgccgacgg cccgggcgcg cgtgctgatc tcgccgagct
     1441 tcgggatgat ccgttccttg aacggcatcg tcacgaccag tccgtcgaga ttagcaatgg
     1501 tcatcaaggc gtcgatggcg gcgtcgaagt cgtcgggcaa gagatgcatg ggcaccagca
     1561 ccgcattttg gccggcggcg gcgatgcgcg gattgaaatt ctggggcgat ctggcgtgga
     1621 tcaccggatc gccgatgaac ccgagcagac gggtgccgcc ggtgatccgg ggtgacatcg
     1681 cgacggaagg cgtcatcaac gttgtccggt gagagcgggc attgtcgtcc tcctctgacg
     1741 tgctcaatca aggggcggcg ggccggatga ggcgcggatg acgagctcgg cctggctctc
     1801 atgtgacgtc aggtgatccc tgccttcgag gcgcgcgatc agcacgcgag ccgccgtccg
     1861 gccgatctcg gcgctgggca ccctcacggt cgtcacgggc accggcaggt ggctcatgat
     1921 ctcgatgtcg tcgtagccga cgatcgacag ctcgtcgggc aatcggatgc ccatcgaaat
     1981 tgcctccagc acggcgccga cggcgagatg cgcgttgccg cacacgaccg cggtcggctt
     2041 cggctcggtc tgcatcagac gtcggaaaag ggcgcggcct tcggcaatgg tccactcgcc
     2101 gatcgcgaaa tgctgcggcc tgaccgcaag gccgcgcagc gccagcgcgt gccgcaaacc
     2161 ttcgaggcgg gcgctcgcgc gatcgttgtt gcgcgtggac tgggcaatga cggcaaaccg
     2221 cacatggccg agatcggcca gataatcggt catcatcacc agcgccttgt gattgtccgg
     2281 cccgatgcag gtgtcgtgcg tctcgggatg gtagacgaac gtgttgacga acggcatgcg
     2341 ccgctgcgcc agcagcggtt cgagctcggg atgatgcgcc tgtcccacca ggatcagcgc
     2401 gtccactccc cgctcgacga acttgcgcac ctgctgcagc tcaagatcga gatcgtattc
     2461 cgagcaggcg agaagaagcg tgtagcccgc ctcggatagt tccgactgga tggcatgcgt
     2521 ggcacgcgcg aagtcgccga cggagagcgt cgggaagacg gcaccgatcg tttgcgaccg
     2581 tcgtgtgctg agcgcgcgcg ccgcgccgtc cggcacccag ccgagttcct tgaccgcagc
     2641 ggcgatccgg tcccgcaaat caggggagac cacgtccgga tggttgatgg cccgggagac
     2701 gctcgccgtg gaaaccccgg ccgcgcgcgc aacctctcgc agcccgacgc tgcgggggcc
     2761 tgcgccggcc gcgggcgcgg catcggctcc gttgtgcggc ttcctcaggc gggccatcgt
     2821 ctgccgccat cctgacgcgt ggtgcagcgc cctgccgaac cgctacgcga gctgatcatg
     2881 gctcaccccg gattgcagcc gatagatgcc gcagtcgcgc acctcgtcgt aacgcgcgcc
     2941 cgccgctgcg agcgcccggg ccgacgccgg tcccgccagc acgtcttcaa gaggcggcgc
     3001 gtcggcggcc tcgatcagca ggatccagtc ggccgtctgg tcgggctgcc cgcgcagcgc
     3061 cttctctgcg ctcggtccgc catccacccc gccctgccct tcaagcagat gcacggcgac
     3121 gattgaaggc tggtcgagaa gcgcagcgat gacgtctcca cgcaccgcgc gcaggaagct
     3181 ggcgcgatcg acgcgcgcgc ccaggcgcaa ggtggcgatg aaggcgccgt cgccgagccc
     3241 gcggctgtcc gcgacggcgc agatggttct ggatgtgtcg ag
//
LOCUS       DATAIQ010000924         1984 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_254694, whole genome shotgun sequence.
ACCESSION   DATAIQ010000924 DATAIQ010000000
VERSION     DATAIQ010000924.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1984)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1984)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1984
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_254694"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(202..1101)
                     /gene="hemF"
                     /locus_tag="VHN20_15200"
     CDS             complement(202..1101)
                     /gene="hemF"
                     /locus_tag="VHN20_15200"
                     /EC_number="1.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009735316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004109 - coproporphyrinogen oxidase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-dependent coproporphyrinogen oxidase"
                     /protein_id="HEX2727165.1"
                     /translation="MTKPISVIDRLKTETPAWFAALRDRICTAFEALEDEAAGPFFPE
                     ASTPGRFERQPWQRTDPTGQPGGGGVMALMRGRVFEKVGVHISTVHGEFAPEFRGQIP
                     GAQDDPRFWASGLSLIAHPWNPNVPTVHMNTRFVVTTKPWFGGGADLTPVLDRRRSQD
                     DADARDFHAAMRDACERHARVAPYDRYRNWCDEYFFLKHRSEARGIGGIFYDYHWSGD
                     PDEDFAFTRDVGEAFLGIYPEIVRRNVDTAWTERDRHEQQVRRGRYVEFNLLYDRGTI
                     FGLKTGGNVDSILSSMPPTARWP"
     gene            complement(1190..1720)
                     /locus_tag="VHN20_15205"
     CDS             complement(1190..1720)
                     /locus_tag="VHN20_15205"
                     /EC_number="2.1.1.207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015933384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0008175 - tRNA methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (cytidine(34)-2'-O)-methyltransferase"
                     /protein_id="HEX2727166.1"
                     /translation="MLRLALYQPDIPQNTGTMLRLAACLGVPVDVVEPAGFDVSDRNL
                     RRAGLDYLDRVAIARHASWRAFTQWRANHGLRLVLATTKGALPYTEFAFRRDDVILLG
                     RESAGVPDEVHRAADARVVIPMQPGLRSLNVAVAAAMLLGEALRQTGTFPAPPPAEAP
                     AAGVAPPVDREPNEAL"
BASE COUNT          306 a          640 c          734 g          304 t
ORIGIN      
        1 gcgtggcggc gcgagacgtt tagcctgccg cgcgacaagg cccgcgaaac ggcgcgcgaa
       61 tggttcgagc gctaccccaa ggcagcctat ctgaccgagg tggaaagctg gcgcgtcctc
      121 gacgacgacc gcatcgaatt caccatgcgc cgcctcccca gcgccgattg acccgcctcg
      181 cccctgatgg gggaggcgat gtcatggcca gcgcgcggtg gggggcatcg aggacaggat
      241 cgaatcgacg ttgccgccgg tcttgagccc gaagatggtg ccgcggtcgt agagcaggtt
      301 gaactcgaca tagcggccgc ggcgcacctg ctgctcgtgc cggtcgcgct cggtccaggc
      361 cgtgtcgacg ttgcgccgga cgatctcggg atagatgccg aggaacgcct cgccgacgtc
      421 gcgcgtgaag gcgaaatcct cgtccgggtc gcccgaccag tgatagtcgt aaaagatgcc
      481 gccgatgccg cgcgcctcgc tccggtgctt gagaaagaag tattcgtcgc accagttccg
      541 gtagcggtcg taaggcgcga cccgggcgtg ccgctcgcag gcgtcgcgca tggcggcgtg
      601 gaagtcgcgc gcgtcggcat cgtcctggct gcggcggcgg tcgagaaccg gcgtcaggtc
      661 ggcgccgccg ccgaaccacg gcttcgtcgt gacgacgaag cgggtgttca tgtgcacggt
      721 cggcacgttc gggttccagg gatgggcgat cagcgaaagg cccgacgccc agaagcgggg
      781 atcgtcctgc gcgcccggga tctggccgcg gaactccggc gcgaactcgc cgtgcacggt
      841 cgagatgtgg accccgacct tctcgaacac ccggccgcgc atcaacgcca tcacgccccc
      901 gccgccgggc tggcccgtcg ggtcggtgcg ctgccagggc tggcgctcga agcggccggg
      961 cgtggacgcc tcggggaaga acggtcctgc ggcctcgtcc tcgagcgcct cgaaggcggt
     1021 gcagatgcgg tcgcgcaagg ccgcgaacca cgccggggtc tcggtcttga ggcggtcgat
     1081 gacgctgatg ggctttgtca cggaacgaga cctgtgcctt tcccccgtgc ggggagcggt
     1141 gtggggcgca atgtcagggc agggcatgtc atggcaggcc taacgcggat tacaatgctt
     1201 cgttcggttc tcggtcgacc ggcggcgcca ctcccgcggc cggtgcctcg gctggaggcg
     1261 gagcaggaaa tgtgccggtc tggcgcaagg cttcgccgag cagcatcgcc gcggcgacgg
     1321 ccacgttgag cgagcgcaaa cccggctgca tcggaatgac gacgcgcgcg tcggcggcgc
     1381 ggtgcacctc gtccggcacc ccggccgatt cgcggccgag caggatcacg tcgtcgcgcc
     1441 ggaacgcgaa ttcggtgtag ggcagggcgc ctttggtggt cgccaggacg aggcgcaggc
     1501 cgtgattcgc gcgccattgc gtgaaggcgc gccaggacgc atggcgggcg atggcgacgc
     1561 gatcgaggta atcgagcccc gcccgccgaa ggttgcggtc ggagacgtcg aagcccgccg
     1621 gctcgacgac atcgacgggc acgccgaggc aggcggcgag gcgcagcatg gtgccggtgt
     1681 tctgcgggat gtccggctgg taaagagcga gacggagcat ggccgctcat gagcgcgccg
     1741 gcggcggcgc gtcaagtgaa cgacagccgg ctggcgccgt tgacgaggtt cgtggcagga
     1801 ggttttcagg gctggacatg ttcgagtggc tcgagcgacg catcgaccct ttcggcccgt
     1861 tcgacgaacg gacgccgccg cattcggtgt ggcgcttcgc ctggcattac ctggcgccga
     1921 cgcgatggtg gctggtcctc atcttcatct ccaacctcat catcgccggg ctcgaatccg
     1981 cgct
//
LOCUS       DATAIQ010000925         1882 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_254897, whole genome shotgun sequence.
ACCESSION   DATAIQ010000925 DATAIQ010000000
VERSION     DATAIQ010000925.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1882)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1882)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1882
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_254897"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(49..786)
                     /gene="truA"
                     /locus_tag="VHN20_15210"
     CDS             complement(49..786)
                     /gene="truA"
                     /locus_tag="VHN20_15210"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012115278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HEX2727167.1"
                     /translation="MPRFKLTIEYDGTPFAGWQRQINGRSVQQAIEEAIEGFAGHAVR
                     IQAAGRTDAGVHATHQVAHVDLDKEWRADTVRDATNAHLRPEPVSVVSAEIVPETFNA
                     RMSARARHYVYRILNRRAPTGIDANRVWHVPWPLDAGIMHAAAQTLVGRHDFTTFRAA
                     ECQADSPLRTLDRLDVTRDGEAIRIAASARSFLHHQVRSMTGTLMLAGAGRWSVDDVR
                     AALEARDRTRCGPTAPACGLYLVGVDY"
     gene            complement(796..1728)
                     /gene="fmt"
                     /locus_tag="VHN20_15215"
     CDS             complement(796..1728)
                     /gene="fmt"
                     /locus_tag="VHN20_15215"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012333979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004479 - methionyl-tRNA formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HEX2727168.1"
                     /translation="MSLKVAFMGTPDFAVPTLAEIVGQGHEVVACYTRPPAAAGRGME
                     LKPSPVQRMAERFAIPVLTPKTLKTDDAAAAFRTHGADVAVVVAYGMILPKAILDAPA
                     LGCLNLHASLLPRWRGAAPIQRAVMAGDAESGVAVMKMEEGLDTGPVGMVERVAIGPD
                     MTAGELHDRLAPLGADLMVRALAALSRGALSFTPQAEEGVTYARKIGNDEARIDWAGG
                     AEAVHNQVRGLSPFPGAFFTADLGKGPERIKVLRTVRADGAGNAGTLLDGRGTIACGS
                     GAVRLVQVQRAGKAPMSAEDFLRGVRLAPGAVLA"
     gene            complement(1725..>1882)
                     /locus_tag="VHN20_15220"
     CDS             complement(1725..>1882)
                     /locus_tag="VHN20_15220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018044793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042586 - peptide deformylase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HEX2727169.1"
                     /translation="EAEADGVLATCVQHELDHLNGVLFIDYLSKLKRDRVVKKFQKAA
                     KRESEDV"
BASE COUNT          269 a          661 c          682 g          270 t
ORIGIN      
        1 tccgatcggg atggccggga cgagcccggc catgacgaga gatgggcgtc agtaatccac
       61 gccgaccaga tacagcccgc aggccggggc ggtcgggccg cagcgggttc tgtcgcgggc
      121 ctcgagcgcg gcgcgcacgt cgtcgacgct ccaacgcccg gcgccggcca gcatcagcgt
      181 gccggtcatc gagcgcacct gatggtgcaa gaacgagcgc gccgaagcgg cgatgcggat
      241 cgcctcgccg tcgcgcgtca cgtcgaggcg gtcgagcgtg cgcagcgggc tgtcggcctg
      301 gcactcggcg gcgcgaaagg tggtgaagtc gtgccgcccg accagggtct gcgcggccgc
      361 gtgcatgatg ccggcgtcga ggggccaggg cacgtgccac acccggttcg cgtcgatgcc
      421 ggtcggcgcg cggcgattga ggatgcgata gacgtaatgg cgcgcccgcg ccgacatgcg
      481 cgcattgaag gtttccggca cgatctcggc gctcacgacc gacacgggct cgggccgcaa
      541 atgcgcgttg gtggcgtcgc gcacggtgtc ggcgcgccac tccttgtcga gatcgacatg
      601 ggcgacctga tgcgtcgcgt gcacgccggc gtcggtgcgc ccggcggcct ggatgcgcac
      661 ggcgtgcccg gcaaaacctt cgattgcctc ctcgatcgcc tgctgcaccg agcggccgtt
      721 gatctgccgc tgccagccgg cgaacggcgt gccgtcatac tcgatcgtga gcttgaagcg
      781 cggcatcacg gcgcctcacg caaggaccgc ccccggtgcg aggcgcacgc cgcgcaaaaa
      841 atcctcggcg ctcatcggcg ccttgccggc gcgttgcacc tggacgaggc gcaccgcccc
      901 gctgccgcag gcgatcgtgc cgcggccgtc aagcagcgtg ccggcgttgc cggccccatc
      961 ggcgcggacg gtgcgcagca ccttgatgcg ctccggtccc ttgccgagat cggcggtgaa
     1021 gaaggcgccg gggaacggcg acaggccccg cacctggttg tgcacggcct cggcgccgcc
     1081 ggcccagtcg atgcgagcct cgtcgttgcc gatcttgcgc gcataggtga cgccctcttc
     1141 cgcctgcggc gtgaacgaca gggcgccgcg cgacagcgcc gccagcgccc gcaccatcag
     1201 gtcggcgccg agaggggcga ggcggtcgtg cagctcgccg gcggtcatgt cggggccgat
     1261 cgcgacccgc tcgaccatgc cgaccggacc ggtgtcgagc ccctcctcca tcttcatcac
     1321 ggcgacgccg gactcggcgt cgccggccat gaccgcgcgc tgaatcgggg cagcgccgcg
     1381 ccagcgcggc agcagcgacg cgtgcaggtt gagacagccg agggcgggcg catccaggat
     1441 cgccttgggc aggatcatgc cgtaggcgac gaccaccgcg acatcggcgc cgtgggtgcg
     1501 gaacgccgcc gcggcatcat ccgtcttcag cgtcttcggg gtcagcaccg ggatggcgaa
     1561 gcgctcggcc atgcgctgca cgggcgatgg cttcagctcc atgccgcgcc cggcagccgc
     1621 cggggggcgc gtgtagcagg cgactacttc gtggccctgg ccgacgatct ccgccagtgt
     1681 cggcacggcg aaatccggcg tgcccatgaa ggccaccttg aggctcatac gtcctcggat
     1741 tcgcgcttcg cggccttctg gaatttcttg accacgcggt cgcgcttgag cttcgacaga
     1801 tagtcgatga acaggacgcc gttgaggtgg tcgagctcgt gctgcacgca ggtggcgagc
     1861 acgccgtcgg cctcggcctc ca
//
LOCUS       DATAIQ010000926         2714 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_347072, whole genome shotgun sequence.
ACCESSION   DATAIQ010000926 DATAIQ010000000
VERSION     DATAIQ010000926.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2714)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2714)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2714
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_347072"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..650)
                     /locus_tag="VHN20_15225"
     CDS             complement(<1..650)
                     /locus_tag="VHN20_15225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017484384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR family transcriptional regulator"
                     /protein_id="HEX2727170.1"
                     /translation="MPEATASPSISPRDAIVEATMRLAAEQPWNDIDITDIAREAGVS
                     LAEFRDLFPSKGAVLGAFSRKIDRAVLQGTTDELAGEPARERVFDVMMRRIDAMTPYK
                     RALRRIAWAVRFDPVTMAALNQVGLNSQRFMLAAAGISTEGPLGLLKLQGAVVVFANT
                     LDAWLEDDDPALARTMARLDRELRRGERVLERAEDVRRLTAPLRAVAQALLDSRRS"
     gene            complement(815..1645)
                     /gene="proC"
                     /locus_tag="VHN20_15230"
     CDS             complement(815..1645)
                     /gene="proC"
                     /locus_tag="VHN20_15230"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012254974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004735 - pyrroline-5-carboxylate
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HEX2727171.1"
                     /translation="MTAPSQAYAVPLVLFGAGKMGGAMLEGWLADGLSLSSATILDPQ
                     PSLEVQTLCAEKRIALNPPLREIPPPKVVVLAIKPQTLDAAGQLIGRLVGEGTLVVSI
                     LAGKTIADLKRHAPRARAIVRAMPNLAASVRRSATAAVATPETSEEQRALAQKLLASI
                     GTVEWLPGEELINAVTAVSGSGPAYFFYLAECLAQAGMGVGLSRDLADHLARATLVGA
                     GELLAQSELPPAKLRHDVTSPGGTTAAALQVLMGEEGLLGVMQTAVAAAKRRADELSG
                     "
     gene            complement(1718..2221)
                     /locus_tag="VHN20_15235"
     CDS             complement(1718..2221)
                     /locus_tag="VHN20_15235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017484382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbjN domain-containing protein"
                     /protein_id="HEX2727172.1"
                     /translation="MTQLHIEDVDRSEHPLDVVERLASIRDWIFDRAETDEMSVSVSG
                     RWSEYHIAFTWIEDVEALHVACAFDLKVPDRRRQEILRLMSSVNEQLWVGHFDLWSTE
                     NVVMFRHALLLAGGAEPTHGQCEMMLKAAVDACERYFQAFQFVLWAGKSARDALDTVL
                     FETKGEA"
     gene            2611..>2714
                     /locus_tag="VHN20_15240"
     CDS             2611..>2714
                     /locus_tag="VHN20_15240"
                     /inference="COORDINATES: protein motif:HMM:NF013691.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HEX2727173.1"
                     /translation="MTIDERTYWVYILASRRNGTLYCGVTNNLSRRVW"
BASE COUNT          428 a          920 c          953 g          413 t
ORIGIN      
        1 atgctgcgcc ggctgtcgag cagcgcctgc gcgacggcgc gcagcggcgc cgtgaggcgg
       61 cggacatcct cggcccgctc gagcacgcgt tcgccgcggc gcagctcgcg gtcgagccgc
      121 gccattgttc ttgccagggc cgggtcgtcg tcctcgagcc acgcgtccag cgtgttggcg
      181 aacaccacga ccgcgccctg cagcttgagc aggccgagcg gcccctcggt cgagatgccg
      241 gccgcggcga gcatgaagcg ctgcgagttg agcccgacct ggttgagcgc cgccatggtc
      301 accggatcga agcgcacggc ccaggcgatg cggcgcagcg cacgcttgta gggcgtcatc
      361 gcgtcgatgc ggcgcatcat cacgtcgaag acgcgctcgc gcgccggctc gcccgcgagc
      421 tcgtcggtcg tgccctgcag cacggcgcgg tcgatcttgc gcgagaaggc cccgagcacg
      481 gcgcctttcg acggaaacag gtcgcggaac tcggccaggc tgacaccggc ttcgcgggcg
      541 atgtcggtga tgtcgatgtc gttccacggc tgctcggcgg cgagccgcat ggtcgcctcg
      601 acgatggcgt cgcgcgggga gatcgacggg gaagccgttg cttcgggcat ggggcactcc
      661 gattttctgc gcgcggtgag gtgcgcggga tcggcgtcag gttagcccgg ccggccctcg
      721 cttgtcatgg ccggccttgt gccggccatc ccgatcggca gcgcaccacg gagcgggatg
      781 cccggcacga ggccgggcat gacagggcgg aacgtcaccc cgacagctcg tcggcgcggc
      841 gcttggcggc ggcgacggcc gtctgcatca ccccgagaag cccctcttcg cccatcagga
      901 cctggagggc ggcggccgtg gtcccgcccg gcgaagtgac gtcgtggcgc agcttcgccg
      961 gcggcagctc gctctgggcg agaagctcgc cggcgccgac cagggtggcg cgggcgagat
     1021 ggtcggcgag gtcgcgcgac aggccgacgc ccatgccggc ctgggccagg cattcggcga
     1081 gataaaagaa ataggccggc cccgagcccg acaccgcggt gacggcgttg atcagctcct
     1141 cgccggggag ccactcgacc gtgccgatgc tggcgagcag cttttgcgcc agcgcgcgct
     1201 gctcctcgct ggtctccggc gtggcgacgg cggcggtggc gctgcggcgc acgctcgcgg
     1261 cgagattggg catggcgcgc acgatcgccc gcgcccgcgg cgcgtgccgc ttgaggtcgg
     1321 cgatggtctt gccggcgagg atcgacacca cgagcgtgcc ctcgccgacg agacggccga
     1381 tcaactggcc ggccgcgtcg agggtctgcg gcttgatggc cagcacgacg accttcggcg
     1441 gcgggatctc gcgcagcggc gggttcagcg cgatgcgctt ctcggcgcac agcgtctgca
     1501 cttcgagcga cggctgcgga tcgaggatcg tcgccgacga caggctcagg ccgtcggcga
     1561 gccagccctc cagcatcgcg ccgcccatct tgccggcccc gaacaggacg agcggcacgg
     1621 cataggcctg cgacggtgcg gtcatgtctc ggctacctca atggacggat ggggcaagcc
     1681 catccctcca ttgtagccgt attttcgcaa agcgcgatca ggcttcgccc ttggtctcga
     1741 acagcacggt gtcgagcgcg tcgcgcgccg acttgccggc ccacagcacg aactggaagg
     1801 cctggaagta acgctcgcag gcgtcgaccg cggccttgag catcatctcg cactggccgt
     1861 gcgtcggctc ggcgccgccc gccagcagga gggcgtggcg gaacatgacg acattctcgg
     1921 tgctccacag gtcgaaatgg ccgacccaga gctgctcgtt gaccgacgac atcagccgca
     1981 ggatctcctg ccggcgccgg tcggggacct tgaggtcgaa ggcgcaggcg acatgcagcg
     2041 cctccacgtc ctcgatccag gtgaacgcga tgtggtattc gctccagcgc ccggacaccg
     2101 agacggacat ctcgtcggtc tcggcgcggt cgaatatcca gtcgcggatc gaggcgagcc
     2161 gttcgacgac gtcgaggggg tgttccgacc gatcgacgtc ttcgatgtgg agctgagtca
     2221 ttgtcatgcg tagggctcac ccaataggat ccggagaaag acgcgaccgt agcgacagcg
     2281 gcaagatcag ctgagctgtc cgggaagatt cgcggcgcaa tgcggaagat gccgataaaa
     2341 taatctgccg gcacaccatc gaatcagttc ttgcctcgac tatagctcgc gcgactccgg
     2401 ggtttcaaag ccccctgagg gtcgaggatt cgcgccccgc ccgcaactgc cggcccgccc
     2461 tgtccacaag agccgggcca tttaaactgt gcattaggga atgcgcgctc gcgggtgatt
     2521 cgcgcggcgc cggggagcac acgcggccgc gccccaactt tgtcattgcc gggcttgacc
     2581 cggcaatcca cagccccgcc aatcaaaggc gtgacgatcg atgagagaac ctactgggtc
     2641 tacatcctcg ccagccgtcg caacggcacg ctttattgcg gcgtgaccaa caacctgtcg
     2701 cgccgcgtct ggga
//
LOCUS       DATAIQ010000927         5905 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_347195, whole genome shotgun sequence.
ACCESSION   DATAIQ010000927 DATAIQ010000000
VERSION     DATAIQ010000927.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 5905)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5905)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5905
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_347195"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..271
                     /locus_tag="VHN20_15245"
     CDS             <1..271
                     /locus_tag="VHN20_15245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002715427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hotdog domain-containing protein"
                     /protein_id="HEX2727174.1"
                     /translation="ENAALNAMRDFLEPGESAVGTVVNVHHLAPTPVGHRVQAEAEVT
                     AVDGRRVAFNVVARDDSEEIGRGTHERMVVDLARLGQRLTAKRKP"
     gene            456..944
                     /locus_tag="VHN20_15250"
     CDS             456..944
                     /locus_tag="VHN20_15250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004118995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaK/EbsC family protein"
                     /protein_id="HEX2727175.1"
                     /translation="MDVKAIPLPSSALKVQQAADRLGLAITVREMPQSTRTADEAAAA
                     CGCDVAQIVKSLVFAGKASSAPYLLLVSGKNRVDEKAVAAVIGEALMRPDAQRVREWT
                     GFAIGGIPPFGHATALPTFVDEELLHHDLVWAAAGTPSALFCVDPKALAGAVGGKVLR
                     VA"
     gene            complement(972..1565)
                     /locus_tag="VHN20_15255"
     CDS             complement(972..1565)
                     /locus_tag="VHN20_15255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012334363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727176.1"
                     /translation="MPKVGFRTRTAVMATAFAGAATLALHPATAEDSGFWDVVRATRP
                     AIRVVAPAPGFTVVTPGAQIARLPPAAPKAVTPPDPAKRENPLAALLRDPTLRYGDIV
                     MFPDGPRVFRGGYGGNHSVHDFVSLAASKELSPANRKLLAAMPVGENNAWSKDISSSA
                     TTVARKFQDVETTGSIGIKTVTVRTGRGDVRVVRVPD"
     gene            1812..2474
                     /locus_tag="VHN20_15260"
     CDS             1812..2474
                     /locus_tag="VHN20_15260"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009492999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008379 - thioredoxin peroxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HEX2727177.1"
                     /translation="MALSIGDMAPDFEADTTEGRMRFHDWIGNSWAVLFSHPKDFTPV
                     CTTELGYMARIKPEFDRRNVKIVGLSVDPVDNHARWAQDIKETQGHAPNYPMIGDPDL
                     SISKAYGMLPAAAGNSSEGRTPADNQTVRNVFVIGPDKKIKLVLVYPMTTGRNFDEVL
                     RVIDSLQMTAKHRVSTPVNWQPGEDVIIAGSVSDEEAKQLYPQGWKAPRPYIRIVPQP
                     GS"
     gene            2554..3588
                     /locus_tag="VHN20_15265"
     CDS             2554..3588
                     /locus_tag="VHN20_15265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009737228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX2727178.1"
                     /translation="MIFRQLFDSPSSTYTYLLASRRGGEALIIDSVLERVDRYLQLIA
                     ELDLKLVKAVDTHLHADHITGLGALRDRTHCITVMGEQSGVDVVSMRVCEGDRLEIEG
                     LSLDVLYTPGHTDDSYSFLLPDRVFTGDTLLIRGTGRTDFQNGDPRAQFHSIFGKLLK
                     LPDETRIFPAHDYKGDTVSTIGEERAFNPRLQVRSVDEYVALMNGLNLPNPKMMDVAV
                     PANTHIGLAQDDIRRRGWSVTATEALRLMGAPDVALIDLREKRERDKHGVIPGSLHAP
                     YADLQENIRPGGILHELATATGKRMVFYCAFGERSAMAVQAAQDAGLASACHLDGGFN
                     AWKAACGPLN"
     gene            complement(3595..4338)
                     /locus_tag="VHN20_15270"
     CDS             complement(3595..4338)
                     /locus_tag="VHN20_15270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015597087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA];
                     GO_process: GO:0018142 - protein-DNA covalent
                     cross-linking [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SOS response-associated peptidase"
                     /protein_id="HEX2727179.1"
                     /translation="MCGRVVQKSRPGELSLAIVDGLEERDNRWSNVPPRYNGAPSQDL
                     WIIRRNPHTGERSLDLLRWGLVPHFCNEKPKPPPINAAVETLLTKTIPPEERPFFREA
                     YHKRRCIMPIDGFFEWKAVKGVKIKQPFAIGMKSGAPFGLGGLWENWKDPKTGEWQRT
                     FCVATTRANSLVRPIHSRMPLILDPADYARWLSDEEDPRDLLKPYAAEPLTMWPVSTR
                     VNSVKNDDPSLIEPALEADTIAPPDGNSA"
     gene            4580..4822
                     /locus_tag="VHN20_15275"
     CDS             4580..4822
                     /locus_tag="VHN20_15275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727180.1"
                     /translation="MTIACAYNLFGHKTKLDLFCAVPEDCPVPHSVDGRWRFAGRVAN
                     AHGVPGFHAASTRGSARRKGYVLFFAEVTAGPALAA"
     gene            4939..>5905
                     /locus_tag="VHN20_15280"
     CDS             4939..>5905
                     /locus_tag="VHN20_15280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012319302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008276 - protein methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006479 - protein methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HEX2727181.1"
                     /translation="MLEGLHPNRPTHVMRLATDERSARALTDLLGEVFDPAETAVAAF
                     ETEDGHSWLLEAYFASEPDQAAIRDLARPIIGETVDAAVFETLAQKDWVKSSLEGLRP
                     VRAGRFLVHGAHDRHERRVNDLAIEIEAALAFGTGHHGTTKGVLLALARQLARRRPRH
                     VLDVGTGTGILAFAAAKALKRLVTAGDIDRVAVDVAKANARLNGIGNLVRFYAAPGVR
                     HGLAGRTRHFDLVLANILARPLMRLAPALARVLAADGVLIVSGLLARDVPQVAAAYAA
                     QGLALLHRSELEGWATLELKRGGVGPRPARLTSQRTDNGACARGAA"
BASE COUNT          947 a         1999 c         2019 g          940 t
ORIGIN      
        1 ggagaacgcg gcgctcaacg ccatgcgcga tttcctcgag ccgggagaaa gtgccgtcgg
       61 caccgtggtc aacgtgcatc acctcgcgcc gacgccggtc gggcatcggg tgcaggccga
      121 agcggaggtg acagcggtcg atggccggcg cgtcgcgttc aacgtcgtcg caagagacga
      181 cagcgaagag atcgggcgcg gcacacacga gcgcatggtc gtcgatcttg cccgtctcgg
      241 gcaacggctc acggccaagc gcaagccttg atcgtgatct ctggcgggcc gcttcttccc
      301 gcgcgaccgc gtgcggctcg tcgcctgcct cgcccctgct tcacgccaaa actatacgcg
      361 tcacgagcgc cagacttgcg gcaatcctcg acgaggcttc acattcgccc cggcagaacc
      421 gtacccatgc ccgtcacccg gccagaggag ctttcgtgga cgtcaaagcc attcccctcc
      481 cctcgagcgc cctcaaggtg cagcaggccg ccgaccgtct cgggctggcc atcaccgtgc
      541 gcgagatgcc gcaatcgacg cgcacggccg atgaggccgc cgcggcctgc ggctgcgacg
      601 tcgcgcagat tgtcaagtcg ctggtgttcg ccggcaaggc gagcagcgcg ccttacctgt
      661 tgctcgtatc gggcaagaac cgcgtcgacg agaaggcggt cgcggccgtg atcggcgagg
      721 cgctgatgcg gcccgatgcg caaagggtgc gcgaatggac gggctttgcc atcggcggca
      781 tcccgccatt cggccacgcg accgccctgc cgactttcgt cgacgaggag cttctgcacc
      841 acgatctggt ctgggcggcc gccggcacgc cgtcggcgct gttttgcgtc gacccgaagg
      901 cgctcgcggg cgcggtcggc ggcaaggtct tgcgggtggc gtgaaccccc tcccgagcgg
      961 aagggatact gctagtccgg cacccggacg acgcggacat cgccccggcc ggtgcgcacg
     1021 gtaacggtct tgatgccgat gctgccggtc gtctccacgt cctggaactt gcgcgcgacc
     1081 gttgtcgcgg agctgctgat gtccttgctc caggcattgt tctcgccgac cggcatggcg
     1141 gccaagagct tgcggttcgc cggcgaaagc tccttcgagg cggcgagcga cacgaagtcg
     1201 tgcacgctgt gattgccgcc gtagccgccc cggaacacgc gcgggccgtc cgggaacatg
     1261 acgatgtcgc cgtagcgcaa cgtcgggtcg cgcagcagcg cggcgagcgg attctcgcgt
     1321 ttggccgggt cgggcggggt taccgccttc ggcgccgccg ggggcagccg ggcgatctgc
     1381 gcgccagggg tcacgacggt aaagcccggc gccggcgcga cgacgcggat tgcagggcgg
     1441 gtggcgcgaa ccacgtccca gaagccgctg tcctcggcgg tggcgggatg cagcgcgagc
     1501 gtagccgcgc ccgcgaaggc cgtggccatc acggcagtcc gggtcctgaa accgacttta
     1561 ggcatgatgg ggctcgcgga acggtcaagc tttgcccagg aaaacgacgt gaaccgccag
     1621 ccggttccgc ccgcaaccca agtaattgct tccagcgccg acgccgtctc cttccctggc
     1681 tgggctccgc ggctcaagga atactgcaat ccaccccatg cccccggtcg cggccggctc
     1741 gctccgcgcc tcccgtcaca gcggctgcga aatgtggtag gatgggcgac atgaatgtgg
     1801 ggaggtttgc gatggctctt tccattggcg acatggcacc ggatttcgag gccgacacga
     1861 ccgaggggcg catgcgcttc cacgactgga tcggcaattc ctgggccgtg ctgttctcgc
     1921 atccgaagga cttcaccccg gtctgcacga ccgagctcgg ctacatggcc cggatcaagc
     1981 ccgagttcga ccgccgcaac gtcaagatcg tgggcctcag cgtcgatccg gtcgacaacc
     2041 atgcccgctg ggcgcaggac atcaaggaga cgcagggaca cgcgcccaac tacccgatga
     2101 tcggcgatcc cgacctgagc atctccaagg cttacggcat gctgcccgcc gcggccggga
     2161 acagctcgga aggccgcacg ccggccgaca accagaccgt gcgcaacgtg ttcgtgatcg
     2221 gccccgacaa gaagatcaag ctggtcctcg tctatccgat gaccaccggc cgcaacttcg
     2281 acgaggtgct gcgggtgatc gattcgctgc agatgaccgc gaagcaccgt gtgtcgacgc
     2341 cggtgaactg gcagccgggc gaggacgtga tcatcgccgg ctccgtgtcg gacgaggaag
     2401 cgaagcagct ttatccgcaa ggctggaagg cgccgcggcc gtatatccgc atcgtcccgc
     2461 aacccggcag ctgacaggcc ggccaaaaca gccggggcgc atggccgccc cggcaacaac
     2521 acagggatgg tccctcgcgg cgcggagggc gccatgatct ttcgtcaact attcgacagc
     2581 ccctcgagca cctacaccta tctgctcgcc agccggcgcg gcggcgaggc gctgatcatc
     2641 gattcggtcc tggaacgggt cgaccgctac ctgcagctga tcgccgagct cgacctgaag
     2701 ctcgtcaagg cggtggacac gcatctgcat gccgaccaca tcaccggcct cggcgccctg
     2761 cgcgaccgca cgcattgcat aacggtgatg ggcgaacaga gcggcgtcga cgtcgtctcg
     2821 atgcgcgtct gcgaaggcga ccgcctcgag atcgaaggct tgagcctcga cgtcctctac
     2881 acgcccggac acaccgacga ttcctacagc ttcctgctgc cggaccgcgt cttcacgggc
     2941 gacacgctcc tgatccgcgg caccggccgc accgatttcc agaacggcga tccgcgcgcc
     3001 caattccatt cgatcttcgg caagctgctc aagctgccgg acgagaccag gatcttccct
     3061 gcgcacgact acaaaggcga cacggtcagc acgatcggcg aggagagggc cttcaacccg
     3121 cgccttcagg tcaggtctgt cgacgaatac gtcgcgctga tgaacggcct caacctgccc
     3181 aacccgaaga tgatggacgt ggcggtgccc gccaacacgc atatcggcct tgcgcaggac
     3241 gacatccggc gccgcggctg gtcggtcacc gcgaccgagg cgctgcggct gatgggcgcc
     3301 ccggacgtgg ccctgatcga cctgcgcgag aagcgcgagc gcgacaagca cggcgtgatc
     3361 cccggctcgc tgcatgcgcc ctatgccgac ctgcaggaga acatcaggcc gggcggcatc
     3421 ctgcacgaac tcgccaccgc caccggcaag cgcatggtgt tctattgcgc cttcggcgag
     3481 cgctcggcga tggcggtgca ggccgcccag gatgccggcc tcgcctccgc ctgccacctc
     3541 gacggcggct tcaacgcctg gaaggcggcg tgcgggccgt tgaattgacc cgcgtcaggc
     3601 gctgttgccg tcggggggcg cgatcgtatc ggcttcgagc gccggctcga tcaggctcgg
     3661 gtcgtcgttc ttgaccgagt tcacccgcgt cgagaccggc cacatggtga ggggctccgc
     3721 cgcatagggc ttgagcaagt cgcgcgggtc ctcctcatcg gagagccagc gcgcatagtc
     3781 ggccgggtcg aggatcagcg gcatgcggct gtggatcggg cgcaccagcg aattggcgcg
     3841 cgtggtcgcg acgcagaagg tgcgctgcca ctcgccggtc ttcggatcct tccaattctc
     3901 ccacaggccg ccgaggccga agggcgcgcc acttttcatg ccgatcgcga agggttgctt
     3961 gatcttgacg cccttgaccg ccttccactc gaaaaagccg tcgatcggca tgatgcagcg
     4021 gcgcttgtgg taggcttcgc ggaagaacgg gcgctcttcc ggcggaatgg tctttgtgag
     4081 gagcgtctcg accgccgcgt tgatcggggg cggctttggc ttctcgttgc agaaatgcgg
     4141 gaccaatccc cagcgcagca gatcgagcga gcgctcgccg gtatgcgggt tgcggcggat
     4201 gatccacaga tcctggctgg gcgcgccatt gtagcgcggc ggcacgttcg accagcggtt
     4261 gtcgcgctcc tcgaggccat cgacgatggc gaggctcagc tctccgggcc tgctcttctg
     4321 aacgacgcga ccgcacatgc cggaccggac atagcgattg caaacggtgt tgtcagtaat
     4381 gccacgcggc gcgacgtgag gagttgtgtg gtgcggcgtg caaagccgcc gattgatttt
     4441 tgtgaatgca ggcgtgggcc gaatcgggcg agcttgattc gctgacgcac ggggtcttcc
     4501 gcaagcggcg gagcgagccc cggtcgcccc ggttcatgag ggcgccgtca cccagcgtcg
     4561 gcgggggagg catttcagca tgaccattgc atgtgcctat aacttgttcg gccacaagac
     4621 gaagctcgac ctcttttgcg cggttcccga agactgcccc gtgccgcaca gcgtcgacgg
     4681 ccgctggcgc ttcgccgggc gtgtcgcgaa cgcgcacggc gtgccgggct ttcacgccgc
     4741 cagcacccgc ggcagcgcgc ggcgcaaagg ctacgtcctt ttctttgcgg aggtgaccgc
     4801 cgggccggcg ctggccgcct gaccggagcc ggtcggcagt cggcaatcgg cagcacctcg
     4861 tttctgccgc aagtccgatt gccgctgccg actgcctcgg cgccgtgaca tgcggcgcag
     4921 gcggtgataa gcgccgccat gctcgaaggc ctgcacccga accgtccgac gcacgtgatg
     4981 cggctggcga ccgatgagcg ctccgcacgc gccctgaccg acctgctcgg tgaggtgttc
     5041 gacccggccg agacggcggt cgccgcgttc gagaccgagg acgggcactc ctggctgctc
     5101 gaggcgtatt tcgcgagcga gcccgaccag gcggcgatcc gcgacctggc gcgcccgatc
     5161 atcggcgaga ccgtcgacgc cgcggtgttc gagacgctgg cgcaaaagga ttgggtgaaa
     5221 agctcgctcg agggcctgag gccggtgcgg gccgggcgtt tcctcgtgca tggcgcgcat
     5281 gaccgccacg agcgccgcgt caacgacctt gccatcgaga tcgaggcggc gctggcgttc
     5341 ggcacgggcc atcacggcac caccaagggc gtgctgctgg ccctggcgcg ccagctcgcc
     5401 cggcggcgcc cgcggcacgt gctcgacgtg ggcacgggga cgggcattct ggccttcgcg
     5461 gccgccaagg cgctcaagcg gctggtgaca gccggcgaca tcgaccgggt cgccgtcgac
     5521 gtggccaagg ccaatgccag gctcaatggg atcgggaatc tggtgcggtt ctacgcggcc
     5581 ccgggcgtcc gccacgggct ggccggccgg acgaggcatt tcgacctcgt gctcgccaat
     5641 atcctggcgc ggccgttgat gcgcctcgcg cccgcgttgg cgcgggtgct ggcggccgat
     5701 ggggtcttga tcgtgtcggg gctgctggcc agggatgtgc cgcaggtggc ggccgcctat
     5761 gcggcccagg gcctggcgct gttgcaccgc tccgagctcg aaggctgggc gacgctggaa
     5821 ctcaagcggg gcggggttgg cccccgccct gcccggctta catctcagcg aacggataac
     5881 ggcgcatgtg ctcgcggcgc agctt
//
LOCUS       DATAIQ010000928         1835 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_347200, whole genome shotgun sequence.
ACCESSION   DATAIQ010000928 DATAIQ010000000
VERSION     DATAIQ010000928.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1835)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1835)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1835
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_347200"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(213..890)
                     /locus_tag="VHN20_15285"
                     /pseudo
     CDS             complement(213..890)
                     /locus_tag="VHN20_15285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612217.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
     gene            complement(947..>1835)
                     /locus_tag="VHN20_15290"
     CDS             complement(947..>1835)
                     /locus_tag="VHN20_15290"
                     /inference="COORDINATES: protein motif:HMM:NF033543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="IS256 family transposase"
                     /protein_id="HEX2727182.1"
                     /translation="DKILGLYAGGMTVRDISAHLSELYGTEIGRDSISRITDAVLADV
                     EAWRTRPLEPVYPIVYFDAMQVRVREDRSVRNLACYLALGVTCDGEREVLGIWWQETE
                     GAKFWLAVLNDLRRRGVQDVLISCVDGLKGFPEAIEATFPKAWVQTCVVHLIRASLRY
                     VNYRDLKKVASALRPIYNAANADQALIELERFETEWGQRYPATARAWRDAWEHMIPFL
                     SLPEELRRAVYTTNTIEGLHRQIRKAIKTRGHFPDQQAATKLIYLAIIKADAKWQRNR
                     TWNAPRAALKIHFGDRYPG"
BASE COUNT          277 a          550 c          670 g          338 t
ORIGIN      
        1 ccccagacca ttcgtttgga ccaagaacgc cgaccagatc ctcgactcca tccgccgcta
       61 ctgcgaccga atcaacgact cacgacacta gcgccacttg acgctgcagc cgcgcgcctg
      121 ggtctcggcg ccgcgatcgc cgccgcggcg gcgccgttcg agcggctgcc gggccgcggc
      181 agcgcctaca cgctcgtgct gcgcaagccg cgctagtgtc gtgagtcgtt gattcggtcg
      241 cagtagcggc ggatggagtc gaggatctgg tcggcgttct tggtccaaac gaatggtctg
      301 gggttttcgt tccaggtctt tatccaggcg cggatgtcgg cattgagcgc ttggaccgac
      361 cggtgcgtgc cgcgcttgag cagcttgttt gtcagttcgc cgaaacagcg ctcgacgagg
      421 ttgagccagg acgagctcgt cggggtgaag tgcaggctga accgggggtg agcgagcagc
      481 catttctgga tcgccggcgt cttgtgggtc gagctgttgt cgagcacgat gtggatctcg
      541 agatcggccg ggacttcgcg gtcgatcgcc tgcaggaacc gtttgaactc gattgcgcga
      601 tggcgcgagt gcagggcgcc gatgaccttg ccgctgctga ggtccagcgc ggcgtagagg
      661 cttgaggtgc cggcgcgccg gtagtcgtgg gtggcgcgct cggggacgcc gggcagcatc
      721 ggcaggatcg gggcggtgcg gtcgagcgcc tggatctggg acttttcgtc gacgcagagc
      781 acgacggcgc gctcgggcgg gttcagatac aagccgacga cgtcgtggac cttgtctacg
      841 aacaacgggt ccttggagag cttgaacgtc tcggcgcgat ggggctggag agactgtccg
      901 gggaactgtg tgtgaggccg gggtggcttg gtgatggtgg tggcgtttag ccggggtagc
      961 ggtctccgaa gtggatcttt agggcggcgc gtggcgcgtt ccaggtgcgg ttgcgttgcc
     1021 acttggcgtc ggccttgatg atcgccaagt agatcagctt ggtggcggcc tgttggtcgg
     1081 ggaagtgccc gcgggtcttg atcgccttgc ggatctggcg gtgcaggccc tcgatcgtgt
     1141 tggtcgtgta gaccgcgcgg cgcagctcct ccggcaacga gaggaacggg atcatgtgct
     1201 cccaggcgtc gcgccaggcg cgtgccgtgg cggggtagcg ctggccccac tcggtctcga
     1261 agcgctcgag ctcgatcagg gcttggtcgg cgttggcggc gttgtagatc ggccgcagcg
     1321 cggaggcgac cttcttgaga tcgcggtagt tgacgtagcg caacgaggct cggatcaagt
     1381 gaacgacgca ggtctgcacc caggccttgg ggaaggtcgc ctcgatcgcc tcggggaagc
     1441 ccttgagccc gtcgacgcag ctgatcaaca cgtcctggac gccgcggcgc cggaggtcgt
     1501 tgagcacggc cagccagaac ttcgcgccct cggtctcctg ccaccagatc cccaacacct
     1561 cgcgctcgcc gtcgcaggtg acccccaagg cgaggtagca ggccaggttg cggaccgagc
     1621 ggtcctcgcg cacgcggacc tgcatcgcgt cgaagtagac gatcggatac accggctcaa
     1681 gcggccgcgt gcgccacgcc tcgacgtcgg cgagcaccgc atcggtgatc cggctgatcg
     1741 agtcgcggcc gatctcggtc ccatagagct cgctcaggtg cgccgagatg tcacgcaccg
     1801 tcatgccgcc ggcgtagagc ccgaggatct tgtcg
//
LOCUS       DATAIQ010000929         5753 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_68891, whole genome shotgun sequence.
ACCESSION   DATAIQ010000929 DATAIQ010000000
VERSION     DATAIQ010000929.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 5753)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5753)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5753
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_68891"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..568)
                     /locus_tag="VHN20_15295"
     CDS             complement(<1..568)
                     /locus_tag="VHN20_15295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012329636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HEX2727183.1"
                     /translation="MIRIGTAGWAIPARVRDRFPEAGTGLVRYAARLPAAEINSTFYR
                     SHRRQTYERWAASVPEAFRFAVKLPKAITHERGLIGVDELALRFLDEIAGLGAKTGPL
                     LIQLPPSLAFDAPAIGRLLSVLRSRAGGPMVCEPRHPSWFADDANRLLADFDVARAAA
                     DPARVPGAARPGGSGSLAYYRLHGSPRMY"
     gene            755..1276
                     /locus_tag="VHN20_15300"
     CDS             755..1276
                     /locus_tag="VHN20_15300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727184.1"
                     /translation="MLTLASGASSKPIDDVVSAFDRALNTVKSSWRSTDESEDGQARR
                     LISDFDGLGGPERDMVAQALTQLWDAFNERFGGLQGFLSAEFSDREAYVTQLERARER
                     MTPYRNGGAAHFYQATALMLAYVRAVLQQQSVESRVLEAVHRGRTLSRERQRSETAQR
                     IRQVTSLAVRAKP"
     gene            1527..2909
                     /locus_tag="VHN20_15305"
     CDS             1527..2909
                     /locus_tag="VHN20_15305"
                     /inference="COORDINATES: protein motif:HMM:NF015905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HEX2727185.1"
                     /translation="MGTAEASAAVEYGVAPLRLNVGRDFCAFLASFGYEDLPAQVVHE
                     SRRGVLDWIGCALAGSRHPKLRKALAGIKALGSAERALVIAHDVRLGLLEAAIVNGQM
                     GHILDYDDTHMDGVVLHTSSPVLAALLSVAETGCFSGREFVCAYVAGFEGGVRVGKAS
                     PGHHDGGWHLTGTLGSIAAGVAVGRMLRLDRAQMTNALGIAATQAAGMQQNRGTMCKS
                     FHAGKAASNGVLAGLLAREGVDSSDEIIEGRRGFSRTYSAGSRPEALLDGLGKDWQIV
                     RNGYKPYACGVVVHPLIDGMIALRRRGVDPTRVEHIEIAVNEAAVRITGLQEPQTGLQ
                     SKFSIYHSAAVSFLDGTAGIAQYSDERALAEEVVQLRRKVRISVDERFRRDEANVSVI
                     DADGMRHEAHVDHATGTVDNPMPDEAIEQKFLANAEPAVGAARAREIAERVWSLEAIE
                     DVRDLVRLCA"
     gene            3000..3977
                     /locus_tag="VHN20_15310"
     CDS             3000..3977
                     /locus_tag="VHN20_15310"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEX2727186.1"
                     /translation="MSLRYLGASLALLVAAVGVSPAVAQWKPTSPVEVVVHTGPGGGN
                     DALGRAMLGIMDKEKLLPVRFQISNKVGGGSATAMNYMREKKGDPNVITIFSSVYVSN
                     PLVQPEASVTMDDLTPIARLVLEPALVVVRTDSPYKTLKDFIDAAKQKPNQLKQSGGS
                     VLSRDAVVRQVLVSSTGAQWPFISFPSGGERIAALLGGHVDMMMIEPSEAGEHIRSGK
                     LRPIAQVSEARLEAFKDVPTIKEAGFNIPNVPQARGIVGPPDMPKEAVAYYADLFKKV
                     SESPGWKKYLDDTHLQNAYQGPDELARFNKQYADQLRTILKDAGVKVIR"
     gene            4137..5546
                     /locus_tag="VHN20_15315"
     CDS             4137..5546
                     /locus_tag="VHN20_15315"
                     /inference="COORDINATES: protein motif:HMM:NF015905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HEX2727187.1"
                     /translation="MTAAKALAEEAGIRRADDGVSQEMHALSAYIAGALRAPLTEEVL
                     EKGRHHLVDTVAAMVSGSHLKPGVLAISYVKALGGTPDCTIIGAGFLTNALNAALANG
                     IMAHADETDDSHLGGRFHPGCGIVPGALAAAELKRESGTNLLKAVILGYDIGTRFNLS
                     LGPRKLYAGGHSTHSVGPLFGAAAAAATLLRLDGTQVRHMLSYAVQQASGVQCWARDD
                     QHVEKAFDFGGMTARDALTAATMVASGFTGVDDALSGENNFYTAFATDPRPAELAKGL
                     GTRFEILQATIKKWCVGSPIQGAIDAVTLLMEQHGITAADVAKIVLELPDDRAKLVDN
                     RTMPNINVQHLVALTLVDGGMTFASAHDHARMADAAVAALRKRIELVANAELTTALPP
                     RQVIMKITTTDGRELAHRTHAVKGTPDNPMTRQEVFDKALDLVGPIIGGARGRELVST
                     LMAIDKVDDVLALRPLLQA"
BASE COUNT          979 a         2001 c         1910 g          863 t
ORIGIN      
        1 aatacatgcg cggcgagccg tgcaggcgat aataggcaag gctgcctgag ccgcccgggc
       61 gcgcggctcc gggcacccgg gccgggtcgg cggcggcccg ggccacgtcg aagtccgcca
      121 ggaggcggtt agcgtcgtcc gcgaaccagc tcggatggcg cggctcgcac accatcggcc
      181 cccctgccct gctgcgcagc acggagagca agcgcccgat agccggcgca tcgaaggcga
      241 ggctgggagg caactggatc agcaacggcc cggtcttcgc tccgaggccg gcaatctcgt
      301 cgaggaaccg gagcgccagc tcgtccaccc cgatcagccc gcgctcatgc gtgatcgcct
      361 tcggcagctt cacggcgaag cggaaggcct cgggcacgga ggccgcccac ctctcgtagg
      421 tctgccgccg gtgcgagcgg tagaaggtgg aattgatctc ggccgccggg agccgggcgg
      481 catagcgcac aagccccgtt cccgcctccg ggaaccggtc gcgcacccga gccgggatgg
      541 cccatccggc cgtgccgatg cggatcatga tccccctagg cgacatgagt ttggcgcgcc
      601 gagggcgatg cgggcgggct ttcccggaag tccacggtta tccacatcga gccacgttga
      661 cgtccgttaa caatcgttgc gagtttgcta catcaatcgc gcgccgccag tgctgtagta
      721 gcggctgggg tatgggtgga gtggagtccg gtagatgctg acgctggcct cgggggcatc
      781 gagtaagccg atagatgatg tggtgtccgc gttcgaccgg gccctgaaca ccgtgaagtc
      841 ctcctggagg agcacggacg agagcgagga cggccaggct cgtcgcctga tctccgattt
      901 cgacggcctg ggcgggcccg agcgcgatat ggtggcgcag gccctcaccc agctctggga
      961 cgcgttcaat gaacgcttcg gcggcctgca gggcttcttg tcggcggaat tctccgatcg
     1021 cgaggcgtat gtcacgcagc tggaaagggc gcgcgagcgc atgacgccgt atcggaacgg
     1081 cggtgccgcc catttctatc aggcgacggc gctgatgctc gcctacgtca gagcggtcct
     1141 gcagcagcaa agcgtcgaat cgcgggtgct cgaggccgtg catcgcggca ggaccctttc
     1201 gcgcgagcgg cagcggtccg agaccgcgca acgcatccgg caggtgacct cgctcgccgt
     1261 gcgcgccaag ccctagcccg ccgcagacgc ggcgctcccc agcgagcgac cgagcttcga
     1321 gggcgctgcg cggcgcttat gtccatcagc gccggcggca catgcgagtc tggtctcttt
     1381 tttcgcgcaa cgcgaaagtt gcagacctcg ttccgacacc tcccagccgc accttgtctc
     1441 gcgcagacgc aaccgattag atgggcgcca cgctgcagcc ggcccgcaga gccgtgacat
     1501 ccaagaacgc agcgccgggg aggagcatgg gaacggccga agcttcggca gcggtggaat
     1561 atggcgtcgc gccgctgcgc ctgaacgtcg ggcgcgactt ctgcgccttc ctcgcaagct
     1621 tcggttatga agacctgccc gcgcaggtgg tccacgaaag ccgccgcggc gttctcgact
     1681 ggatcggctg cgcgctcgcc ggcagccggc acccgaagct gcgcaaagcg ctcgccggca
     1741 tcaaggcgtt gggcagcgcc gagcgggcgc tcgtgatcgc ccacgacgtt cgcctcgggc
     1801 tgctcgaagc ggcaatcgtg aacggccaga tgggtcatat cctcgactac gacgacaccc
     1861 acatggatgg agtcgtcctc cacaccagct ccccggttct cgccgccttg ctctcggttg
     1921 ccgaaaccgg gtgcttcagc gggcgcgaat tcgtctgcgc ctacgtcgcc ggtttcgaag
     1981 gcggcgtgcg tgtcggcaag gcctcgccgg gccaccacga cggcggctgg cacctgaccg
     2041 gcaccctcgg ctcgatcgcc gccggcgtcg ccgtaggccg catgctgcgc ctcgaccgcg
     2101 cgcagatgac gaacgcgctc ggcatcgccg cgacgcaggc ggccggcatg cagcagaacc
     2161 gcggcaccat gtgcaagtcg ttccacgccg gcaaggcagc atcgaacggt gtgctcgccg
     2221 ggcttctggc ccgcgaaggc gtcgacagct ccgacgagat catcgagggc cgccgcggct
     2281 tctcgcgcac ctacagcgcc ggctccaggc cggaggcgct gctcgatggg ctcgggaaag
     2341 actggcagat cgtgcgcaac ggctacaagc cttacgcctg cggggtcgtc gttcacccgc
     2401 tcatcgacgg catgatcgcg ctgcggcgcc gcggcgtcga cccgacgcgc gtcgagcaca
     2461 tcgagatcgc ggtcaacgag gccgctgtgc gcatcaccgg gctgcaggag ccgcagaccg
     2521 gcctgcagtc gaagttcagc atctatcatt ccgcggccgt ctccttcctc gacggcaccg
     2581 ccggcatcgc ccaatacagc gatgagcgcg ccctcgccga agaggtggtg cagctgcgcc
     2641 gcaaggtgcg catctcggtc gacgagcgct tccgccgcga cgaggcgaac gtatcggtga
     2701 tcgacgctga cgggatgcgc cacgaggcgc atgtcgacca cgcgaccggc accgtcgaca
     2761 acccgatgcc cgacgaggcg atcgagcaaa aattcctcgc caacgccgag cctgccgtgg
     2821 gcgccgcgcg cgctcgggag atcgccgaac gcgtctggtc actcgaggcg atcgaagacg
     2881 tccgcgacct cgtgcgcctc tgcgcttgaa cccgccgtcg aaatgaggtc gaattcctat
     2941 ctcggacgaa aacacctgaa gacgccggac caaccgtgcg tcacgcatgg gaggacatga
     3001 tgagtttgcg atacctcggc gcttcgctcg cgctgctcgt ggcggccgtc ggcgtctcgc
     3061 ccgccgtcgc ccaatggaag ccgacgagcc ccgtcgaagt ggtcgtacat accggtcccg
     3121 gcggcggcaa cgacgcgctc gggcgcgcca tgctcggcat catggacaag gagaagctgc
     3181 tgccggtccg cttccagatc tcgaacaagg tcggcggtgg cagcgccacg gcgatgaact
     3241 acatgcggga gaagaagggc gacccgaacg tcatcacgat cttctcgagc gtctacgtga
     3301 gcaacccgct cgtccagccg gaggcgagcg tcaccatgga cgacctgacg ccaatcgcgc
     3361 ggttggtgct cgagccggcg ctggtcgtcg tgcgcaccga ctcgccctac aagacgctca
     3421 aggatttcat cgacgcggcc aagcagaagc cgaaccagct caagcagtcc ggcggctccg
     3481 tcctgtcgcg cgatgcggtc gtgcgccagg ttctggtctc gtcgaccggc gcgcaatggc
     3541 cgttcatctc gtttccatcc ggcggcgagc gcatcgccgc cctgctcggc ggtcacgtcg
     3601 acatgatgat gatcgagccg agcgaggccg gcgagcacat ccgctccggc aagctgcgcc
     3661 cgatcgcgca ggtctcggag gcgcgcctcg aagccttcaa ggacgtgccg accatcaagg
     3721 aggccggctt caacatcccg aacgtgccgc aggcacgcgg catcgtcggc ccccccgaca
     3781 tgccgaagga agcggtcgcc tattacgccg acctgttcaa gaaggtgtcc gagtcgcccg
     3841 gctggaagaa atatctcgac gacacgcacc tgcagaacgc ctaccagggc cccgacgagc
     3901 tggcgcgctt caacaagcag tatgccgacc agctgcgcac catcctgaag gacgccggcg
     3961 tcaaggtgat ccggtaacgc gcacgctgcc ggctcggctc gccccgccct tcacttggta
     4021 ttggcgggct tgaacctttt agtgcccgga cggcgcgaag cgctgatccg gacaccaagg
     4081 cgtgaccggg ccacggcaat ggcacctgaa aaggtagcaa acggagaaga aagaacgtga
     4141 cggctgcgaa agctttggcc gaggaggccg gtatccggcg cgccgacgac ggcgtctcgc
     4201 aggagatgca tgcgctgagc gcctacatcg ccggcgccct gcgcgcgcca ttgaccgagg
     4261 aggtgctcga gaaaggtcgc catcatctcg tcgacaccgt cgccgccatg gtgtccgggt
     4321 cgcatctcaa gcccggcgtg ctggcgatct cctacgtgaa ggcgctcggc ggcacgcccg
     4381 actgcaccat tattggcgcc ggcttcctca ccaatgcgct caacgccgcg ctcgccaacg
     4441 gcatcatggc gcatgccgac gagacggacg attcgcatct cggcggtcgc ttccaccccg
     4501 gctgcgggat cgtgcccggc gccctcgccg ccgccgagct caagcgtgag agcggcacca
     4561 acctgctcaa ggcagtgatc ctcggctacg acatcggcac gcgcttcaac ctgtcgcttg
     4621 gcccgcgcaa gctctatgcc ggcggccaca gcacgcacag cgtgggcccg ctgttcggcg
     4681 ccgcggccgc ggcggcgacg ctcctgcggc tcgacgggac gcaagtccga cacatgctgt
     4741 cctacgcggt gcagcaggcg tcgggcgtgc aatgctgggc gcgcgacgac cagcatgtcg
     4801 agaaggcatt cgatttcggc ggcatgaccg cgcgcgacgc cctgaccgcc gccaccatgg
     4861 tcgcctccgg cttcaccggc gtcgacgacg cgctgtcggg cgagaacaat ttctacaccg
     4921 ccttcgccac tgacccgcgg cccgcagagc tcgccaaggg tctcgggacg cgcttcgaga
     4981 tcctgcaggc aacgatcaag aagtggtgcg tcggctcgcc gattcagggg gccatcgacg
     5041 ccgtgacgct gctgatggag cagcacggga tcacggcggc ggatgtggcg aagatcgtgc
     5101 tcgagctgcc tgacgaccgg gcgaagctcg tcgacaatcg cacgatgccg aacatcaacg
     5161 tgcagcacct cgtcgcgctc accctggtgg acggcggcat gaccttcgcc agcgcccacg
     5221 atcacgcgcg catggccgat gcagccgtcg ccgccctgcg caagcgcatc gagctggtgg
     5281 ccaatgcgga gctcacgacg gcgctgccgc cgcgccaggt gatcatgaag atcaccacga
     5341 ccgacgggcg cgagctcgcc catcgcaccc acgccgtgaa aggcacgccc gacaatccga
     5401 tgacccggca ggaggtgttc gacaaggcgc tcgatctcgt cggcccgatc atcggcggcg
     5461 cgcgcgggcg ggagctcgtc tcgacattga tggcgatcga caaggtggac gatgtcctgg
     5521 cgctgcggcc tctcctgcaa gcctgatccg gcccggcgcc tcggctcgcc attcctcatc
     5581 ctgacgagcc gcctcccgag ccttggcttc agccggcccg acgatcagct ccggccgcgt
     5641 cgcgatgcac gcaccgcgtt gtcaccctcg agtgccggcg gtatccattg accatgggca
     5701 ggacctcgcg cgcctatggc gacgtgatct ccggcgggct gctcgccggg ctc
//
LOCUS       DATAIQ010000930         1846 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_347608, whole genome shotgun sequence.
ACCESSION   DATAIQ010000930 DATAIQ010000000
VERSION     DATAIQ010000930.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1846)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1846)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1846
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_347608"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..605)
                     /locus_tag="VHN20_15320"
     CDS             complement(<1..605)
                     /locus_tag="VHN20_15320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010915929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mandelate racemase/muconate lactonizing enzyme
                     family protein"
                     /protein_id="HEX2727188.1"
                     /translation="MKIESVNVYLIAAGSLHPVIVELVTDEGITGIGEAAIAYGVGGT
                     AAAGMVKDLGARIVGRDPSRIEELWSEMYDHTFWAKGGGAIVFAGISAIETALWDIKG
                     KALGVPVYELLGGRIRDAVRVYANGWYGGARTPAELAKAAERPLRDGYTALKCYPLAE
                     WTGSGLRHVTRRQVDRSFADLAFDKVKTLRQAVGPAVEIML"
     gene            716..1009
                     /locus_tag="VHN20_15325"
     CDS             716..1009
                     /locus_tag="VHN20_15325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015343678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEX2727189.1"
                     /translation="MAGLFQRVVERTGASVPFTIDGEPVEAKEGDLLITAILLHRPAL
                     RRFEFGAGARAGFCMMAACQDCWVELGDGRRLRACSTPVEAGMSVLTGAARDA"
     gene            1002..>1846
                     /locus_tag="VHN20_15330"
     CDS             1002..>1846
                     /locus_tag="VHN20_15330"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX2727190.1"
                     /translation="MPDPIVAIVGAGPAGVRAAETLAHAGIRPILFDEAERPGGQIYR
                     QPPKGAVRPGIYGLETGKAEAIHRVLPDLGDRVDYRPRTLVWNVFKGRLDLLTPDGYG
                     EQRFDRLILATGAMDRALPFPGWTLPGVFTLGGAQIALKGQGVAIGRHIAFVGAGPLL
                     PLVAHQYAKAGADVVAVLDVTPFSAKVANLPGMLAESATLAKGLYYTAFNRLRRLKVH
                     YGVRAIRAEGTTQVEALAFCDGSGREQRIDCDAIGASSGLRSETQLADLAGCGFAFDR
                     AGRQWV"
BASE COUNT          263 a          635 c          647 g          301 t
ORIGIN      
        1 tcgagcatga tctcgaccgc tggcccgacg gcctgccgca gcgtcttgac cttgtcgaag
       61 gccaggtccg caaacgaacg gtcgacctgc cggcgcgtga cgtggcgcag cccgctcccg
      121 gtccactcgg cgaggggata gcatttgagc gccgtgtagc cgtcgcgtaa ggggcgctct
      181 gccgccttcg caagttcggc gggcgtgcgt gcgccgccgt accagccgtt cgcgtaaacg
      241 cgcaccgcat cgcggatgcg gccgccgaga agctcgtaga cggggacgcc cagcgccttg
      301 cctttgatgt cccacaaggc ggtctcgatc gcgctgatgc cagcgaagac gatggcgccg
      361 ccgcccttcg cccagaatgt gtggtcatac atctcgctcc acagctcctc gatccgcgac
      421 gggtcgcgtc cgacgatgcg ggcgccgaga tccttgacca tcccggcggc ggcggtgccg
      481 ccgaccccgt aggcgatcgc cgcctcgccg atgccggtga tgccctcgtc ggtgacgagc
      541 tcgacgatca cgggatgaag actcccggcc gcaatgagat aaacattgac gctctcgatc
      601 ttcatggtct ggtccttgcg cgcattgcgg ggcgtggtcg gcggagtaat gtcgtaagta
      661 cgacgtgccg gttgccggtc aaccgccgtt gcgagccgat aggggagggc ggcgcgtggc
      721 aggactgttc cagcgggtcg tcgaaaggac cggcgcgagc gtgcccttca ccatcgacgg
      781 ggagccggtc gaggcgaagg aaggcgatct cctcatcacc gcgatcctgc tgcatcggcc
      841 ggcgctgcgg cgtttcgagt tcggcgcggg ggcgcgggcg ggtttctgca tgatggcggc
      901 atgccaggat tgctgggtcg agcttggcga cggccgccgc ctgcgggcct gctcgacgcc
      961 ggtcgaagcc ggcatgagcg tcctcaccgg cgccgcccgc gatgcctgat ccgatcgtcg
     1021 ccatcgtcgg cgccggcccc gccggcgttc gcgcggccga gacgctggcc cacgccggga
     1081 tcaggccgat cctgttcgac gaagcggaac ggcccggcgg gcagatctac cgccagccgc
     1141 cgaaaggcgc ggtgcggccc ggcatctatg ggttggaaac cggcaaggcc gaagccatcc
     1201 accgcgtcct gcccgatctc ggcgacaggg tggactaccg gccgcggacg ctcgtgtgga
     1261 acgtcttcaa gggccggctc gatctgctca ccccggacgg ctacggcgag cagcgattcg
     1321 accggctcat cctcgcgacc ggcgccatgg atcgcgcgct gccgttcccc ggctggacgc
     1381 tgcccggcgt gttcaccctc ggcggggcgc agatcgcgct caagggccag ggcgtcgcga
     1441 tcggccgcca catcgccttc gtcggcgccg ggccgctgct gccgctcgtc gcgcatcaat
     1501 atgcgaaggc gggcgccgac gtcgttgccg tgctcgacgt gacaccgttc tccgcgaagg
     1561 tggccaatct gccgggcatg ttggcggagt ccgcaacgct cgccaagggc ctctactaca
     1621 ccgccttcaa ccgcctgcgc cgtctgaagg tgcactatgg cgtgcgcgcc atccgggcgg
     1681 agggaaccac acaggttgaa gcgctcgcct tttgcgatgg ctcggggcgt gagcagcgca
     1741 tcgattgcga tgcgatcggc gcctcctcgg gcttgcgcag tgagacgcag cttgccgatc
     1801 tcgccggctg cggctttgcc ttcgaccgcg ccggccggca gtgggt
//
LOCUS       DATAIQ010000931         1784 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_161819, whole genome shotgun sequence.
ACCESSION   DATAIQ010000931 DATAIQ010000000
VERSION     DATAIQ010000931.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1784)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1784)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1784
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_161819"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(107..>1784)
                     /locus_tag="VHN20_15335"
     CDS             complement(107..>1784)
                     /locus_tag="VHN20_15335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015933383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2727191.1"
                     /translation="LLIGWFVDLLNQSTPERVWAEHGTLLIAVALLVAVVRPVLHFAH
                     EAVFNQAMTAQSANMIRWRTHVHTLGHALSYFQRDFAGRLANRIVQAGPALRDIAFDV
                     IDRLWYVVIYAFTALAVFGTTSFWLALPTVLWIAGYVGLTVYFVPRAQERSRRNADAR
                     SVMIGRIVDSYTNIMTVKLFARGEQERSAVREAIAAGNGAYLNSLRLITGVNAILQTM
                     NSVYLVVTAAIAGWLWSQGEMTPGAVAAGLALALRLSTMSGWVMQTVRSVFENIGVVQ
                     ESMETVARPHAIVDAPDARPLRVTRGAIRFERVTFHYGREDGVIDDLDLTIAPGEKVG
                     IVGASGAGKSTIASLLLRLHDLEGGRILIDGQDIARVTQDSLRGQIGVVTQDTSLLHR
                     SIRDNIAYGRLDADDADIARAARLAHAEGFIATLEDHKGRRGYAAHVGERGVKLSGGQ
                     RQRIAIARVILKDAPILVLDEATSALDSEVEAAIQDALATLMAGKTVIAIAHRLSTIA
                     ALDRLVVLDEGRIVETGTHAELLRRGGLYARLWQRQSGGFLGIEEEAVLA"
BASE COUNT          289 a          610 c          625 g          260 t
ORIGIN      
        1 ccagctgctg ccgaggtgcg cggatccgga acacccgcag ccgttgtggt cctcccaatt
       61 cgccaggacc tgctgcctca acgctctgcg gccccagaag ggcccgtcac gccagcacgg
      121 cctcctcctc gatgccgagg aagccgccgg actggcgctg ccacaggcgc gcgtagaggc
      181 cgccgcggcg cagaagctcg gcatgggtcc cggtctcgac gatgcggccc tcgtcgagca
      241 ccacgaggcg gtcgagcgcg gcgatggtcg aaagccggtg cgcgatggcg atcacggtct
      301 tgccggccat gagggtggcg agcgcatcct ggatggccgc ctcgacctcg gaatcgagcg
      361 ccgaggtcgc ctcgtcgagc accaggatgg gcgcgtcctt gaggatcacg cgcgcgatgg
      421 cgatgcgctg gcgctggccg cccgacagct tgacaccgcg ctcgccgaca tgcgccgcgt
      481 aaccgcggcg gcccttgtgg tcctcgagcg tcgcgatgaa gccttccgcg tgggcgagcc
      541 gcgccgcgcg cgcgatgtcg gcatcgtccg catcgaggcg gccgtaggcg atgttgtcgc
      601 ggatcgagcg atgcagcagg gaggtgtcct gcgtgacgac gccgatctgc ccgcgcaggg
      661 agtcctgcgt gacacgggcg atgtcctgcc cgtcgatcag gatgcggccg ccttcgagat
      721 cgtgcaggcg caacagaagc gaggcgatcg tgctcttgcc ggcgccgctc gcgccgacga
      781 tgcccacctt ctcgcccggc gcgatggtca ggtcgagatc gtcgatgacg ccgtcctcgc
      841 ggccgtaatg aaaggtcacg cgctcgaaac ggatggcgcc gcgcgtcacg cgcaacggcc
      901 gcgcgtccgg cgcatcgacg atggcgtgcg gccgcgcgac cgtctccatg ctctcctgaa
      961 cgacgccgat attctcgaac acgctgcgca cggtctgcat gacccagccc gacatcgtgc
     1021 tgagccgcag cgccagcgcc agcccggcgg cgacggcgcc cggcgtcatc tcgccctgcg
     1081 accacagcca accggcgatc gccgcggtga cgaccagata gacgctgttc atcgtctgca
     1141 ggatggcgtt gacgccggtg atgaggcgaa gcgaattgag ataggcgccg ttgccggccg
     1201 cgatcgcctc gcgcaccgcc gaccgctcct gctcgccgcg cgcgaacagc ttgacggtca
     1261 tgatgttggt gtagctgtcg acgatgcgcc cgatcatgac cgagcgggca tcggcgttcc
     1321 tgcgcgagcg ctcctgtgcg cgcggcacga aatagacggt cagcccgaca tagccggcga
     1381 tccacagcac ggtcggcagc gccagccaga agctcgtcgt cccgaacacg gcgagcgccg
     1441 tgaacgcgta gatcaccacg taccagaggc gatcgatcac gtcgaaggcg atgtcgcgga
     1501 gcgccgggcc tgcctgcacg atgcggttgg cgagccgtcc ggcgaagtcg cgctggaaat
     1561 agctgagcgc gtggccgagc gtgtgcacat gcgtgcgcca gcggatcatg ttggccgatt
     1621 gcgcagtcat ggcctggttg aagacggcct cgtgcgcgaa atgcagcaca ggccggacca
     1681 cggcgacgag cagggcgact gcgatcagca gcgtgccgtg ctcggcccag acgcgttccg
     1741 gcgtcgactg gttgagcagg tccacgaacc agccgatcag gagg
//
LOCUS       DATAIQ010000932         4639 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_69078, whole genome shotgun sequence.
ACCESSION   DATAIQ010000932 DATAIQ010000000
VERSION     DATAIQ010000932.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4639)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4639)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4639
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_69078"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..790)
                     /locus_tag="VHN20_15340"
     CDS             complement(<1..790)
                     /locus_tag="VHN20_15340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015822713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HEX2727192.1"
                     /translation="MTVHVMPGAVGLDRVLNAHRAKDVLRFITCGSVDDGKSTLIGRL
                     LHDTRQLFDDQLAALKRDSRKHGTQGANIDFALLVDGLSAEREQGITIDVAYRFFSTD
                     KRTFIVADTPGHEQYTRNMATGASTADLAVLLVDARKGLSRQTRRHSLLVSMLGIRQV
                     ILAVNKMDLVGWSQDRYEAIVQEYAAFARELGFYSIVGVPLSALNGDNIVQRGVAASW
                     YEGPALLEQLETAPPQGHAHLQPFRFPVQWVNRPDSSFRGYAGMI"
     gene            complement(790..1752)
                     /gene="cysD"
                     /locus_tag="VHN20_15345"
     CDS             complement(790..1752)
                     /gene="cysD"
                     /locus_tag="VHN20_15345"
                     /EC_number="2.7.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012335181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004781 - sulfate adenylyltransferase
                     (ATP) activity [Evidence IEA];
                     GO_process: GO:0019419 - sulfate reduction [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit CysD"
                     /protein_id="HEX2727193.1"
                     /translation="MAVANLAFSEAAPTGHASERTARLTHLQRLEAESIHILREVVAE
                     SENPVLLYSIGKDSSVLLHLVQKAFYPAKPPFPLLHVDTTWKFRDMIAFRDRRARELG
                     LDLIVHVNEDGLARGVGPVTHGSDVHTDVMKTQALRQALDSHGFDAAIGGARRDEEKS
                     RAKERVFSLRNAHHRWEPKRQRPEPWQLYNARKRRGESFRVFPLSNWTELDVWLYIEQ
                     EQIPIVPLYFAAERPVVRRDGLLILRDDERLPLHPGETPELRSVRFRTLGCYPLTGAV
                     ESTATTLSEIIRETLETTSSERQGRLIDQDGASSMERKKQEGYF"
     gene            complement(1752..2510)
                     /locus_tag="VHN20_15350"
     CDS             complement(1752..2510)
                     /locus_tag="VHN20_15350"
                     /EC_number="1.8.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012752798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004604 - phosphoadenylyl-sulfate
                     reductase (thioredoxin) activity [Evidence IEA];
                     GO_process: GO:0019379 - sulfate assimilation,
                     phosphoadenylyl sulfate reduction by
                     phosphoadenylyl-sulfate reductase (thioredoxin) [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoadenylyl-sulfate reductase"
                     /protein_id="HEX2727194.1"
                     /translation="MSITKNHVPVVLSALGAATSLAERLARIRREVTGRIVFTTSFGL
                     EDQVLADAIFTSGHDIEVVTLDTGRLFPETYDVWAATEERCRRRIVAYAPETDAVEHL
                     VASQGIDGFRASVDARVACCGVRKVAPLRRALAGAAAWITGLRAEQSRDRAGVPLAEF
                     DGAHGLIKLNPLADWTRRDVERFVADRGIPYNLLHDRGFPSIGCAPCTRAVRVGEPER
                     AGRWWWEADAKKECGLHVRPAAEPALLPRNSGAI"
     gene            2686..3159
                     /locus_tag="VHN20_15355"
     CDS             2686..3159
                     /locus_tag="VHN20_15355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019903092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HEX2727195.1"
                     /translation="MDVTDKKILGLLQQDATLSIAEVGERVGLSQTPCWKRIQRLESD
                     GVIERRVALLNPEKLGLKITALVAIEAGDHSAAWIANFADRVSAMPEVLEIYRMAGDV
                     DYVLRVVVADMQTYDAFYKRLVAAVPLKNVTTRFAMERVKSTTALPIEAAASDQR"
     gene            3471..>4639
                     /locus_tag="VHN20_15360"
     CDS             3471..>4639
                     /locus_tag="VHN20_15360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015950911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin domain-containing protein"
                     /protein_id="HEX2727196.1"
                     /translation="MATTALLPRTAPFLDDQIASLDRVLSVATPVQRAWLAGFLAGID
                     AAAQPAPAQAQPRAAEPITIVFASESGNAERIAQDAAKLARKSGFRPKVIDFADLELA
                     ALKDAGALIVVAATWGEGEPPSRAARAYAELISPEAPRLEGVKFGVLALGDTAYAEFC
                     AVGKALDARLAELGATRVVDRIDCDLDFDSPASAWVKRAIETLVPAAASDNVVAVDFG
                     GRGSAEVSREHVLAEVLEHVNLNSSRSDKETFHLALGFEQGAPGYEPGDALELFAEND
                     PALVDAVLSATGLAGDDSLREALTKERDITTLSVPVIQKFADATSHAGVRALLDGDVR
                     AWKNDRQLIDLLETFPASLDRDQLLALTRPLPTRAYSIASSRAEAGDEAHLLIAAV"
BASE COUNT          775 a         1578 c         1555 g          731 t
ORIGIN      
        1 cgatcattcc cgcatagccg cggaacgacg agtccggccg gttgacccac tgcacgggaa
       61 agcggaacgg ctgcaggtgc gcgtgcccct ggggcggcgc cgtctcgagc tgctcgagca
      121 gcgcgggccc ttcataccag cttgcggcga cgccacgctg cacgatgttg tcgccgttca
      181 gcgccgacag cggcacgccg acgatgctgt agaacccgag ctcgcgtgca aaggccgcgt
      241 attcctggac gatcgcctcg tagcgatcct gcgaccagcc gacgaggtcc atcttgttga
      301 cggcgaggat cacctgccgg atgccgagca tcgagacgag cagggaatgg cgccgcgttt
      361 gccgggacag ccccttgcgc gcatcgacga gcagcacggc aagatccgcg gtcgaggcgc
      421 cggtcgccat attgcgcgtg tattgctcgt ggccaggcgt atcggcgacg atgaaggtgc
      481 gcttgtcggt cgagaagaag cggtaggcga cgtcgatcgt gatgccttgc tcacgctccg
      541 cggaaaggcc atcgacgagc agcgcgaagt cgatgttggc gccttgcgtt ccatgctttc
      601 gcgaatcgcg tttcagcgcc gcgagctggt cgtcgaagag ctgcctggtg tcgtgcagca
      661 ggcggccgat cagcgtcgac ttgccgtcgt cgacggagcc gcaggtgatg aagcgcagga
      721 cgtccttggc gcggtgcgcg ttgaggacgc ggtccaagcc gacggcgcct ggcatgacgt
      781 gaacggtcat cagaaatagc cctcctgctt cttgcgctcc atcgaagacg cgccgtcctg
      841 gtcgatgagc cggccctgcc gctccgagct ggtcgtctcg agggtctcgc ggatgatctc
      901 ggaaagcgtg gtggccgtgc tttccaccgc cccggtcagc gggtagcagc cgagcgtcct
      961 gaaacgcacc gagcgcagct cgggcgtttc gcccggatgc agcggcagcc gctcgtcgtc
     1021 gcgcaggatc agaagcccgt cgcggcgcac caccggccgc tcggccgcaa agtagagcgg
     1081 cacgatcggg atctgctcct gctcgatgta gagccagacg tcgagctcgg tccaattgga
     1141 tagcggaaaa acgcggaagc tttcgccgcg ccgcttgcgt gcgttgtaga gctgccaggg
     1201 ctccggccgc tgccgcttcg gctcccagcg gtgatgggcg ttgcgcagcg agaagacgcg
     1261 ctccttggcg cgcgatttct cctcgtcgcg acgggctccg ccaatggccg catcgaaccc
     1321 gtggctgtcg agcgcctggc gcagcgcctg cgtcttcatc acgtcggtgt ggacgtcgga
     1381 gccgtgggtg accgggccga cgccgcgcgc gagaccgtcc tcgttgacat gcacgatcag
     1441 gtcgagcccg agctcccgcg cgcgccggtc gcggaaggcg atcatgtcgc ggaacttcca
     1501 ggtggtgtcg acgtgcaaaa gcgggaacgg cggcttcgcc ggataaaacg ctttctgcac
     1561 caggtgcagc agcacggaag aatccttgcc gatcgaataa agcaggaccg gattctcgct
     1621 ctcggcgacc acctcgcgca ggatgtggat gctctccgcc tcgaggcgct gcagatgcgt
     1681 cagccgcgcc gtgcgttcgg acgcgtgccc ggtcggcgcc gcttccgaaa atgccagatt
     1741 cgctacagcc atcagatcgc ccccgaattg cgcggcagca gcgcgggctc cgccgccggg
     1801 cgcacatgca gaccgcattc ctttttcgcg tccgcttccc accaccagcg cccggcccgc
     1861 tcgggctctc cgacgcgcac ggcgcgggtg cacggcgcgc aaccgatcga tggaaagccg
     1921 cggtcatgaa gaagattgta gggaatgccg cgatcggcga cgaagcgctc gacgtcgcgg
     1981 cgcgtccaat cggccagagg gttgagcttg atcaggccat gcgccccgtc gaactcggcg
     2041 agcgggacgc cggcgcgatc tcgcgactgc tccgcgcgaa ggccggtgat ccaggctgcg
     2101 gcccctgcca gcgcgcgccg cagcggcgcc accttgcgca cgccgcagca cgccacgcgg
     2161 gcgtcgacgg aggcccggaa gccgtcgatg ccttgcgagg cgacgagatg ctcgaccgca
     2221 tcggtctcag gcgcataggc gacgatgcgg cgccgacagc gctcctcggt cgctgcccag
     2281 acgtcgtagg tctcaggaaa aagccgcccg gtatcgaggg tcacgacctc gatgtcatgg
     2341 ccactggtga aaatggcatc ggcaaggacc tggtcctcga gcccgaaact ggtggtgaac
     2401 acaatccgac cggtcacctc ccgcctgatt ctggcgaggc gttcggcgag gctggtcgct
     2461 gctcctaatg cggaaagcac aaccggaacg tgatttttcg tgatgctcat gcgtggctcc
     2521 agcgcccaag acttgttcgg caaaacgaac ggtgtcaaga ttgccgaacg ggtgaagagc
     2581 tgcggccgga cgcttccagc cggccgaatg gccgctcgag agaagaacct tctccgaggc
     2641 tgcggcacga ggcgacgctg gtttctcagg gacgcgagtt gagagatgga tgttaccgac
     2701 aaaaaaattc tcggcctgct tcagcaagac gcgacgctgt cgatcgccga ggtgggcgag
     2761 cgcgtcggcc tctcgcagac gccctgctgg aagcggatcc agcgcctcga gtccgacggc
     2821 gtgatcgagc gccgggtcgc actcctcaat ccggagaagc tcgggctgaa gatcaccgcc
     2881 ctcgtcgcca tcgaagccgg cgaccattcc gccgcctgga ttgcgaattt cgctgaccgc
     2941 gtcagcgcca tgccagaggt gctcgagatc taccgcatgg ccggggacgt cgattacgtg
     3001 ctgcgggttg tggtcgccga catgcagacc tacgacgcct tctacaaacg gctggtcgcg
     3061 gcggtgcccc tcaagaacgt gaccacccga ttcgccatgg agcgggtgaa gtcgacgacc
     3121 gcgcttccga tcgaggcggc agccagtgat cagagatgag gcccatcccc tcccgctggc
     3181 catgcgggct cccgagatct gcgactggaa tgacgccggc cgggaacacg gcgcgcccgg
     3241 gaaaggcgac gggcatgccc gctgcgcgcg ggatggagca accgcgtggc gtccctaccc
     3301 tgggcaccag cccctccgca gtcgctcgcg acacggcctc gcaggcaggg ccgtcggagg
     3361 acaatctcct cccggcgccc cgtcggacag atgtcccgtg ctcctgaggg tcgttctata
     3421 aaaagaacat tcttcttgac tcagaacgcc accgcgccga cgattcaggc atggccacga
     3481 ccgctctcct gccgcgcacg gcacccttcc tcgacgacca gatcgccagc cttgaccgcg
     3541 tcctcagcgt cgccacccct gtccagcgcg cctggctggc gggcttcctg gctggcatcg
     3601 acgccgccgc ccagccggcg ccggcccagg cacagccacg ggcggccgag ccgatcacga
     3661 tcgtgttcgc gagtgaatcg ggcaatgccg agcgcatcgc ccaggacgca gcgaagctcg
     3721 cgcgcaagag cggtttccgg ccaaaggtga tcgacttcgc cgatctcgaa ctcgccgctc
     3781 tgaaggacgc cggcgcgctg atcgtcgtgg cagcgacctg gggcgaaggc gagccgccct
     3841 cgcgcgcggc gcgggcctac gccgagctga tcagcccgga agcaccgcgc ctggagggcg
     3901 tgaagttcgg cgtcctggcg ctcggcgaca ccgcctatgc ggagttctgc gccgtcggca
     3961 aggcgctcga cgcccgcctt gccgagctcg gcgcgacgcg ggtcgtcgac cggatcgact
     4021 gcgatctcga tttcgacagc ccggcctcgg cgtgggtgaa gcgtgccatc gagacgctgg
     4081 tgcccgcggc ggcgtcggac aacgtggtgg cggtcgattt cggcgggcgc ggctcggccg
     4141 aggtcagccg cgagcacgtg ctcgccgagg tgctcgagca cgtcaacctg aactcgtcgc
     4201 gctccgacaa agagaccttc catctggctc tcggcttcga acagggcgcg cctggctacg
     4261 agcccggcga cgcactcgag ctgttcgccg agaatgatcc agccctggtc gacgccgttc
     4321 tctcggccac cggtctcgcc ggtgacgaca gcctgcgcga ggcgctgacg aaagagcgcg
     4381 acatcacgac gttgtccgtg cccgtgatcc agaaattcgc ggacgccacc agccacgccg
     4441 gagtgcgcgc attgctggac ggcgacgtgc gcgcctggaa gaacgaccgc cagctcatcg
     4501 acctgctcga gacgttcccg gcgtccctcg atcgcgacca gcttctcgcc ctgacccgcc
     4561 ccctgccgac gcgggcctat tcgatcgcat cctcgcgcgc cgaggccggc gacgaggcgc
     4621 atctcctgat cgcggccgt
//
LOCUS       DATAIQ010000933         1951 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_347837, whole genome shotgun sequence.
ACCESSION   DATAIQ010000933 DATAIQ010000000
VERSION     DATAIQ010000933.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1951)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1951)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1951
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_347837"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..933
                     /locus_tag="VHN20_15365"
     CDS             <1..933
                     /locus_tag="VHN20_15365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015821706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX2727197.1"
                     /translation="ERMMEGEREKLLTMEVAVGKRVIGQEQAVKAVSAAVRRARAGLQ
                     DLNRPLGSFLFLGPTGVGKTELTKALAEFLFDDPHAMVRIDMSEFMEKHAVARLIGAP
                     PGYVGYEEGGVLTEAVRRRPYQVVLFDEVEKAHADVFNVLLQVLDDGRLTDGQGRTVD
                     FSNTLIILTSNLGSQYLAGLGEDDPAEKVEGQVMEVVRAHFRPEFLNRLDEIILFHRL
                     GQAHMGPIVDIQVARLGKLLEDRKIRLELSEAARAWLGRVGYDPVYGARPLKRAVQKY
                     LQDPLADAILAGTVPDGATVKVDEGDGGLSLTPQ"
     gene            976..1503
                     /locus_tag="VHN20_15370"
     CDS             976..1503
                     /locus_tag="VHN20_15370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727198.1"
                     /translation="MIVMRIAGAALALAVASGDAAQSRELPHMTPKIFSDVTDCRRIA
                     DAAQRLACFDRAVGALAAAQERKDIYVADKATMAETRRGLFGFNLPRVRIFGDSDMAA
                     DVKSIESTIRSVSSGQRGYVFILEDGAKWAQTDGAYMDRPKPGSKIRIRRAALGSYMG
                     SIEGRVGFRIERLNN"
     gene            1531..>1951
                     /locus_tag="VHN20_15375"
     CDS             1531..>1951
                     /locus_tag="VHN20_15375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727199.1"
                     /translation="MLTAGSIEQSLLRAQSLAQAGRLAEAWVAIAPAKAAIWNNGQAL
                     RLYALIAQNAGQDGAAIDALERIVAIENAPLPIIGALADTLGKAGRHGEAYRQWSRLV
                     ALDPNAADAHLNRALAANEAGKPDLAIAAAEDGLRRFP"
BASE COUNT          332 a          637 c          688 g          294 t
ORIGIN      
        1 gaacggatga tggaaggcga gcgcgagaag ctgctgacca tggaagtcgc ggtcggcaag
       61 cgcgtcatcg gccaggagca agcggtgaaa gccgtgtcgg cggcggttcg ccgcgcccgt
      121 gccgggctgc aggatcttaa ccgcccgctc ggatcgttcc tgttcctagg gccgactggc
      181 gtcggcaaga ccgagctaac caaggcgctc gccgaattcc tgttcgacga tccccacgcg
      241 atggtgcgga tcgacatgag tgagttcatg gagaagcacg ccgtcgcccg gctgattggc
      301 gcgccgccgg gctatgtcgg ctacgaagaa ggcggcgtgc tgaccgaggc ggttcgccgg
      361 cggccctatc aagtggtgct gttcgacgag gtcgaaaagg cccatgccga cgtcttcaac
      421 gtgctccttc aggtgctcga cgacggacgg ctgaccgatg gccagggccg taccgtcgat
      481 ttttcaaaca cgctcatcat ccttacctcg aacctcggca gccagtatct cgccgggctc
      541 ggcgaggacg acccggcgga gaaggtcgaa ggccaggtga tggaggtggt gcgcgcccac
      601 ttccggccgg agttcctgaa ccggctcgac gaaatcatcc tgttccatcg gctcggccag
      661 gcgcacatgg gaccgatcgt cgatatccag gtggcgcggc tcggcaagct gctcgaggac
      721 cgcaagatca ggctggagct gagcgaagcg gcgcgcgcct ggctcgggcg ggtcggctac
      781 gacccggttt atggcgctcg gccgctcaag cgggcggttc agaaatacct ccaggacccg
      841 ctggccgacg cgatccttgc cggcaccgtg cccgacggcg cgacggtcaa ggtcgacgag
      901 ggcgacgggg gcttgagttt gacgccgcaa taaggaggcg ccatgctcgc cggcagtgag
      961 cctgggaggg ttggaatgat cgtgatgcgt atcgccggtg cggctcttgc ccttgccgtc
     1021 gcctcgggcg acgcggcgca atcgcgcgag ctgccccaca tgaccccgaa gatcttcagc
     1081 gacgtcaccg attgtcgcag gatcgccgac gccgcgcagc gcctcgcctg cttcgaccgc
     1141 gccgtcggcg cgctggcagc ggcgcaggag cgcaaggaca tctatgttgc ggacaaggcg
     1201 accatggccg aaacccggcg cgggctgttc ggcttcaacc tgccgcgcgt gcgcatcttc
     1261 ggcgacagcg acatggccgc ggacgtcaag tcgatcgaat cgaccatccg ctcggtctcg
     1321 tcggggcagc gcggctatgt cttcatcctc gaggacgggg ccaagtgggc gcagaccgac
     1381 ggcgcctaca tggaccggcc caagccgggc tcgaagattc gaatccggcg cgccgcgctt
     1441 ggcagctaca tgggcagcat cgagggccgg gtcggcttcc gcatcgagcg gctcaacaat
     1501 taggacacca gcgatgcgcc ggcccgggcg atgttgaccg ccggatcgat cgagcagtcg
     1561 ctgctgcggg cccaatcgct tgcccaggcc gggcggttgg ccgaggcgtg ggtcgcgatc
     1621 gcgccggcca aggcagcgat ctggaacaat ggccaggcgc tccggctcta cgcgttgatc
     1681 gcccagaacg ccgggcagga cggcgcagcg atcgacgcgc ttgagcggat tgtcgcgatc
     1741 gagaacgccc cgctgccgat catcggcgcg cttgccgaca cgctcggcaa ggcgggcagg
     1801 cacggggagg cgtaccgcca gtggagcagg ctggtggcgc tcgacccaaa cgccgcagac
     1861 gcccacctca accgcgcgct agccgccaac gaggcgggca agccggatct tgccatcgcc
     1921 gcggccgagg acgggctgcg gcgcttcccc g
//
LOCUS       DATAIQ010000934         2946 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_255615, whole genome shotgun sequence.
ACCESSION   DATAIQ010000934 DATAIQ010000000
VERSION     DATAIQ010000934.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2946)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2946)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2946
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_255615"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(28..525)
                     /locus_tag="VHN20_15380"
     CDS             complement(28..525)
                     /locus_tag="VHN20_15380"
                     /inference="COORDINATES: protein motif:HMM:NF018979.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter TctB
                     family protein"
                     /protein_id="HEX2727200.1"
                     /translation="MPLSNEPPRPARRFDFHSDFAIAGGIVAFCAVVYAVTMTFPQVP
                     AALASGMGPEVFPRLLLGVMVLLAGVLAFVARGKPDEMREPVPRLVPLTALGFLAFPP
                     LAWLVGLLLAAFLLMVGFGLLWGERRRMLLVASAAFLCLLIYVVFVKGFAIPLPRGVI
                     VDWLF"
     gene            complement(545..1525)
                     /locus_tag="VHN20_15385"
     CDS             complement(545..1525)
                     /locus_tag="VHN20_15385"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEX2727201.1"
                     /translation="MVLQQLISPFASRAALAVCVGALALSGAAAQEKFPSKTIEVVTH
                     AGVGGGTDITARMMMVQAPGEFGQELVVVNKQGGSGAAALGYAASRAKDGHTVMLITQ
                     THLLTALQGKGAGVKLEDIVGVARATDDPQILMVGKNSPFKTAKEFIDASKGKAMKYG
                     TTQVASVDHIAVLGFAKEAGLQAPTVVPFRGGGDVVINLVGGNIDAALINFAEAESQI
                     KAGEVRALLVLDRERNASLPEVPTGAEIGVPAFYSTVRGFAVLKGTPEDRIKTLEDGL
                     VKAMNGKLYQDYIKSSGQSSKSVVGRAEWQKQLDEFSKSGKEALAAIGVK"
     gene            complement(1600..2277)
                     /locus_tag="VHN20_15390"
     CDS             complement(1600..2277)
                     /locus_tag="VHN20_15390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013166545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FCD domain-containing protein"
                     /protein_id="HEX2727202.1"
                     /translation="MDNRKALAAIELRRTQSLTAIVSKELERMILSGELTAGERLNEQ
                     VLATRLGVSRGPVREATRALERAGLVTVIANQGVFVRQIGFDEAIEIYDVRAVVFGFA
                     CERLAKHISAAQRAELADLIAGMDAAIAAGDSTSYYGQNLRFHDAMMTFAAHGRAKQV
                     YDSLINETHLFRQRSLGTKESMRESNAEHAAILDAIASGDAERARKLGEEHSLAGKRR
                     WLEALSR"
     gene            2380..>2946
                     /locus_tag="VHN20_15395"
     CDS             2380..>2946
                     /locus_tag="VHN20_15395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019198267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX2727203.1"
                     /translation="MPFEPASKALSRFLLLDLSRVRSGPTAVRQLADWGANVIKIEAP
                     PALEGGDSPGGPRHGADFQNLHRNKRSLTLNLKAPQGRAILKRLAETADVLVENFRPD
                     VKHRLGIDYESLAKINPRLVYASISGFGQDGPYSDRPGFDQIAQGMGGLMSITGLPGQ
                     GPVRVGIPVADLCAGLFCAQGILLALLER"
BASE COUNT          502 a          996 c          964 g          484 t
ORIGIN      
        1 ccggcggcga atccgtccat ctttgcctca gaagagccag tcgacgatca cgccgcgcgg
       61 cagtgggatc gcgaatcctt tgacgaagac cacatagatc agaaggcaca ggaacgccgc
      121 gctcgcgacg agcagcatgc ggcgccgctc gccccacagc aggccgaaac cgaccatgag
      181 caggaacgcg gcgaggagca ggccgacgag ccaagccagt ggtgggaaag cgaggaagcc
      241 gagcgcggtg agagggacga ggcgcggcac cggctcgcgc atctcgtcag gcttgccgcg
      301 cgcgacgaaa gccagcacgc cggccagcag caccatgacg cccagcagga gacgcgggaa
      361 gacctccggg cccatgccgc tcgccagtgc cgccggcacc tgcggaaagg tcatcgtgac
      421 ggcgtagact accgcgcaaa aggcgacgat gccgccggcg atcgcgaagt cggaatgaaa
      481 atcgaaccgc cgcgccgggc gcggcggttc attgctgaga ggcatgtccg ccacggccgc
      541 cggcttactt cacgccgatc gcggccagtg cttccttgcc ggacttggaa aactcgtcga
      601 gctgcttctg ccattcggcg cggccgacga cgctcttcga cgattgcccg gacgacttga
      661 tatagtcctg gtagagcttg ccgttcatcg ccttgaccaa cccgtcctcg agcgtcttga
      721 tgcggtcctc cggagttccc ttcaggacgg cgaagccgcg cacggtcgag taaaaggcgg
      781 gaacgccgat ctcggcgccg gtcggcacct cgggcagcga tgcgttgcgt tcgcggtcga
      841 gcacgagcag cgcgcgcacc tccccggcct tgatctgcga ttccgcctcg gcgaagttga
      901 tcagggcggc gtcgatgttg ccgccgacca agttgatcac gacatcgccg ccgccgcgga
      961 acggcaccac cgtcggcgcc tgcaggccgg cctccttggc gaagccgagg acggcgatgt
     1021 ggtcgacgct ggcgacctgc gtcgtgccgt atttcatcgc cttgcctttc gacgcatcga
     1081 tgaattcctt cgccgttttg aaggggctgt tcttgccgac catcaggatc tgcggatcgt
     1141 cggtggcgcg ggcgacgccg acgatgtcct cgagcttgac gccggccccc ttgccctgga
     1201 gggccgtcag cagatgcgtc tgcgtgatca gcatgacggt atggccgtcc ttggcgcggg
     1261 aagccgcgta gccgagggcc gcggcgccgc tgccgccctg cttgttgacc acgaccaact
     1321 cctggccgaa ctcacccggc gcctgcacca tcatcatgcg cgccgtgatg tcggtgccgc
     1381 cgccgacgcc ggcatgcgtc acgacctcga tggtcttgga cgggaacttc tcctgcgcgg
     1441 ccgcgccgga cagggcgagc gcgccgacgc agacggccag cgccgcacgt gacgcgaaag
     1501 gcgagatcag ttgttgcagg accataggct tttttcctcc gggatgttct ttcggcctgt
     1561 tgatcaggct ctgactcact ttgtaactgg taatggctcc tatcggctca gcgcctccag
     1621 ccagcggcgt ttgccggcca gcgaatgctc ctcgccgagc ttgcgggcac gctcggcgtc
     1681 cccggacgcg atggcgtcga gaatggctgc gtgctcggcg ttcgactcgc gcatgctctc
     1741 tttcgtgccg agggagcgct gccgaaagag gtgcgtctcg ttgatcagcg agtcgtaaac
     1801 ctgcttcgca cgcccatgcg cggcaaaggt catcatggcg tcgtggaagc gcaggttctg
     1861 gccgtaatag cttgtgctgt cgccagccgc gatcgccgca tccatcccgg cgatgagatc
     1921 ggccagctcc gcccgttgcg cggccgaaat gtgcttcgcc agacgctcgc aggcaaaacc
     1981 gaacaccact gcgcgcacgt cgtagatctc gatcgcttca tcgaagccga tctggcgcac
     2041 gaacacgccc tgattggcga tcacggtgac cagcccggcg cgctcgaggg cgcgcgtcgc
     2101 ctcgcgcacg ggaccgcggc tgacaccgag ccgggtcgcc aggacctgct cgttgagtcg
     2161 ctcgcccgcc gtgagctcgc cgctcaggat catgcgctcg agctccttgg acacgatcgc
     2221 ggtcagagac tgcgtgcgcc ggagctcgat ggcggccaga gccttgcggt tgtccatatg
     2281 tccaagcttg tccgggcaaa aaattctgtc aactgtcttc cgccgacaaa ttgccgacag
     2341 tatacaatca ccaaaagaac gatcggacgg gaggacacat tgccgtttga gccggcctcg
     2401 aaagccctgt cgcgcttcct cctgctggac ctgtcacgcg tgcggtccgg gccgaccgcg
     2461 gtgcgccaac tggcggactg gggcgccaat gtcatcaaga tcgaggcgcc gccggccctc
     2521 gaaggcggcg actcgccggg cggcccgagg catggggccg acttccagaa cctgcaccgc
     2581 aacaagcgca gcctgacgct caacctcaag gcgccgcagg gacgggccat cctcaagcgc
     2641 ctcgccgaga ccgccgacgt gctggtcgag aacttccggc ccgacgtgaa gcaccggctc
     2701 gggatcgatt acgagagcct ggcgaagatc aacccgcgcc tcgtctatgc cagcatctcc
     2761 ggcttcggcc aggacgggcc ctatagcgac cggccgggct tcgaccagat cgcgcagggc
     2821 atgggcgggc tgatgtcgat cacgggcctg cccggacaag ggccggtgcg ggtcggcatt
     2881 cccgtggcgg atctctgcgc gggactcttc tgcgcgcagg gcatcctgct ggcgctcctc
     2941 gagcgc
//
LOCUS       DATAIQ010000935         2463 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_210153, whole genome shotgun sequence.
ACCESSION   DATAIQ010000935 DATAIQ010000000
VERSION     DATAIQ010000935.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2463)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2463)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2463
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_210153"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1312
                     /locus_tag="VHN20_15400"
     CDS             <1..1312
                     /locus_tag="VHN20_15400"
                     /inference="COORDINATES: protein motif:HMM:NF017085.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="CHAD domain-containing protein"
                     /protein_id="HEX2727204.1"
                     /translation="LAAVLSARRLHGRLKPVFWTEVERTTWRVRSKGAEVEVAVDEGR
                     VVADGQSRTFAEVELELKDGSPSDLFTLARALSPAGGLKLGVLTKAERGYALAAKDAP
                     SSFRAEAISLQPEMSTADAFRTIVQACIRHFRLNEPLLLATRTAEPLHQCRVALRRLR
                     TALSVFRDVVSDDEFENLRDRLKSISQKLGEARDLDILLGSLQDPHDEQAESEPDKPG
                     LIERARADRERAYDRLMTALDGQRYRTLMFELLAWSETGRWLQTDAAAAQARREQPIE
                     SFAAEVLERRRRKIRKRARHLDALNPPDRHRVRIEAKKLRYASEFFSSLAADKKTQRR
                     QQAFTKTLEDLQEHLGELNDLATRDKIVTDAAHPDGQPDDAGAAAGRRDPGQRRAHKR
                     AMAGATRAYQSFADAKRFWTAHGTDRTPGGRRKRTRRATRSSKS"
     gene            1422..1844
                     /locus_tag="VHN20_15405"
     CDS             1422..1844
                     /locus_tag="VHN20_15405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010687558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HEX2727205.1"
                     /translation="MTEVLLVTSRSSRRWIIPKGWPITGIKPHSAARREALEEAGLVG
                     RVTKRCLGSFYYRKRLRQGRAVTCEVHVFPLNVRRQHKTWREKKQRETRWFTPDVAAA
                     VVHEPGLSRIIAQFAVAAQATASGAESLASTAQLPVSF"
     gene            complement(1879..2115)
                     /locus_tag="VHN20_15410"
     CDS             complement(1879..2115)
                     /locus_tag="VHN20_15410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727206.1"
                     /translation="MPSGLYNASRDVIPTLHHLAGQHISNDEMLERLKEEHPDATLPE
                     IVNRAFYAVTDPDQPAGERINRIYDFALAARRLL"
BASE COUNT          445 a          834 c          803 g          381 t
ORIGIN      
        1 tctcgccgcc gtcctctccg cccggcgcct ccatggacgc ctcaagcccg tgttctggac
       61 ggaggtcgaa cggaccacgt ggcgcgtccg ctcgaaaggc gccgaggtcg aagtggcggt
      121 ggacgaaggt cgcgtggtgg ccgatggcca gagcaggacg tttgccgagg tggagctgga
      181 gctgaaggat ggctcgccgt ccgacctgtt cacgctcgcc cgtgcgctga gtcccgccgg
      241 cggcctcaag ctcggggtgc tgaccaaggc cgagcgcggc tatgccctcg cggcgaagga
      301 cgcgccctcg tcattccgag ccgaggcgat cagccttcag cccgaaatga gcacggcgga
      361 tgcgtttcga accattgtcc aggcctgcat ccgccacttt cggctcaatg agccgctgct
      421 gctcgccacc aggaccgccg agccgctcca ccagtgccgc gtggcgttga ggcgtctccg
      481 tacggcgctg tccgtcttcc gtgacgtcgt ctccgacgac gagttcgaaa accttcgtga
      541 ccgcctcaaa tcgatctcgc agaagctcgg cgaagcgcgc gatctcgata tcctgctcgg
      601 cagcctgcaa gatccccatg acgagcaagc cgagagcgag cccgacaagc ctgggctgat
      661 cgagcgggcg cgggcggatc gtgaacgggc ctatgaccgg ctcatgaccg ccctggatgg
      721 tcagcgctat cggaccctga tgttcgagct cctggcgtgg agcgagaccg gccgatggct
      781 tcagacggac gctgccgccg cgcaggcccg ccgcgagcag ccgatcgaaa gttttgcggc
      841 cgaggtgcta gaacggcgac gccgcaagat ccgcaagcgg gcccgccacc tcgacgcgct
      901 caaccctccc gaccgccacc gcgtgcgcat cgaagcaaaa aagctgcgct acgcgagcga
      961 gttcttttcc tccctcgccg cggacaagaa gacgcaacga cggcagcagg ccttcaccaa
     1021 gacgctggag gacctgcagg aacatctggg cgagctcaac gacctcgcca cacgcgacaa
     1081 gatcgtcacc gacgccgctc atcccgatgg acaaccggac gatgcgggcg cagccgccgg
     1141 tcggcgcgat cccggacagc ggcgggcaca caaaagggcc atggctgggg cgacgcgcgc
     1201 ctaccagtct tttgccgatg ccaagcggtt ctggaccgcg cacggcacgg accggacgcc
     1261 cggcggcagg cgcaagcgga cgaggcgtgc aacgcgctcg tcgaagtcat gacaacgtca
     1321 tcgggagttt ccagactcgc ggcatgagcg attccaaagc ccgttcgcaa cgagtctata
     1381 cccaatacgc cgccttgccc ttccgacggc gcgctgacgg catgaccgag gtgctccttg
     1441 tcacctccag gagcagccgc cgctggatca ttccgaaagg ctggccgatc acgggcatca
     1501 agccgcacag cgcggcacgc cgggaggcac tggaagaagc cggcctggtg gggcgcgtca
     1561 ccaaacggtg cctgggctca ttctactaca ggaagcgact gcgacaggga cgcgccgtga
     1621 cgtgcgaggt ccacgttttc ccgttgaacg tcagacgtca gcacaagaca tggcgcgaga
     1681 agaagcagcg cgagacgcgg tggttcacgc ctgacgtcgc cgccgcggtc gtgcacgagc
     1741 cggggctcag ccgcatcatt gcgcagttcg cggtcgccgc gcaggcaacc gcctccggcg
     1801 ccgaatcgct cgcgtccacc gcgcagctac cggtcagttt ttgaaaagac gccccgatcg
     1861 cgccggcggc agcgcggatc agagcagccg gcgcgcggcg agagcgaagt cgtagatgcg
     1921 gttgatccgc tccccggcgg gctggtccgg atcagtcacg gcgtagaacg cgcggttgac
     1981 gatctcgggc agcgtcgcgt cgggatgctc ctccttgagg cgctccagca tctcgtcgtt
     2041 cgagatatgc tggcccgcga gatgatgaag cgttggaatg acgtccctcg acgcgttgta
     2101 caagccgctc ggcatacgcc gccctccgat gagcactggt cgacgctgat agcgcagaca
     2161 gcgaccacgc ggtagccgcc aggcctgtga gcagctgtgg atggccgaac tcctccgcgg
     2221 tccgccagcg cttttctctg gggaaatcgt gaaagccagc agtccgggtg acgagacccg
     2281 cgccgctggg gtggcgtcgc cgtcatcgcg aattcaaaaa accgtcgcgg ttctgttagg
     2341 gtcccggcct agtgcatgct cggaccgcaa tttcgaggtg caatgatgac gctcacgtcc
     2401 cgccctgtcc taaaccgccg ccgctttctg gccaccagca gcgctgccgg tcttgcaagc
     2461 ctt
//
LOCUS       DATAIQ010000936         2459 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_210165, whole genome shotgun sequence.
ACCESSION   DATAIQ010000936 DATAIQ010000000
VERSION     DATAIQ010000936.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2459)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2459)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2459
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_210165"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(171..1127)
                     /locus_tag="VHN20_15415"
     CDS             complement(171..1127)
                     /locus_tag="VHN20_15415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009494000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX2727207.1"
                     /translation="MTSGCWLTESLVTSGVAAPSARPSLDQDPVLLVATTRRAITERP
                     WFGAQRGRGLTFAEARLSPPDRSLTGRVASIVTGDWNLSAIERTDNSPNAATAFVNAA
                     LGRDVLIYVHGYRESFESAALSSAQLSSGIGFRGASALFTWPSGGATFDYVSDRDSVM
                     WSRDAFEDLLKALSDSPSGGRVHIVAHSMGTLLTLETLRMLRASGGESSMARIGAVVL
                     AAPDVDLDLFTRGVERLGPDAKKITVISSTNDRALAISARLSGNVRAGAADREQLVRR
                     LEPLGVRIADASEYGSGFINHDLFLSNQEVQQVVKRAVARAD"
     gene            1526..>2459
                     /locus_tag="VHN20_15420"
     CDS             1526..>2459
                     /locus_tag="VHN20_15420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007593564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEX2727208.1"
                     /translation="MASFTRRGLIASTAAASAVAGLRIQPGAAQANYPTRPITMLCPW
                     GAGGGTDATARIVASLLEKELGQPVNVINRTGGSGVVGHQAIASGAPDGYTLGILTVE
                     ISMMHWQGLTDLTPQSYTPLALMNEDPPGVHVKADAYQNVKELAEAIKKAPPGKLKAS
                     GTGQGGIWHLALVGWLQDMGLKPDHVAWVPSNGAAPGMQDLAAGGVDIVPCSLPEGRS
                     IVEAGKAKALAIMAQQRNPAFASVPTLKEELGTSFAPTGAWRGFAGPKGLPQDVATKL
                     VAAFKKVYESKEYNEFMSSRGFGVRWAEANAFAQF"
BASE COUNT          399 a          847 c          874 g          339 t
ORIGIN      
        1 agcggcgacg cggatccgga ttaaaattca ccccaccgtg tcattccggg gcggccgaag
       61 gccgaacccg gaacccacga ccgggtgcgg catcaatcgc accgttacac ccagtcgtgg
      121 gttccgggtt cgcgcttcgc gcgccccgga atgacaaggt gtgaggtgag ctaatccgcc
      181 cgtgcgacgg cgcgtttgac gacctgctgc acttcctggt tcgacaggaa gaggtcgtgg
      241 ttgatgaagc cgctgccgta ttcggaggcg tcggcgatgc gcacgccgag cggctcgagg
      301 cggcgcacca gctgctcgcg gtcggcggcg ccggcgcgca cgttgccgga caggcgcgcc
      361 gagatggcga gcgcgcggtc gttggtcgac gagatcacgg tgatcttctt ggcgtcgggc
      421 ccgaggcgct cgacgccgcg cgtgaacagg tcgaggtcga cgtcgggcgc ggcgagcacg
      481 acggcgccga tgcgcgccat ggagctttcg ccgccggacg cgcgcagcat gcgcagcgtc
      541 tcgagcgtca gcagcgtgcc catggaatgg gcgacgatat gcacgcgccc gccgctcggg
      601 ctgtccgaca acgccttgag caggtcctcg aaggcgtcgc gcgaccacat cacgctgtcg
      661 cggtcggaga cgtagtcgaa ggtggcgccg cccgacggcc aggtgaacag ggccgaggcg
      721 ccgcggaagc cgatgcccga cgacagctgc gccgagctca aggcggcgct ctcgaaactc
      781 tcgcggtagc cgtgcacgta gatcagcacg tcgcgcccaa gcgccgcgtt gacgaaggcg
      841 gtggcggcgt tcgggctgtt gtcggtgcgc tcgatcgccg acaggttcca gtcgccggtg
      901 acgatcgagg cgacgcgccc ggtcagcgag cggtcgggcg gcgacaggcg cgcctcggcg
      961 aaggtcaggc cgcggccgcg ctgcgcgccg aaccagggcc gctcggtgat ggcgcgccgg
     1021 gtcgtcgcga cgaggaggac cgggtcctgg tcgagggacg ggcgcgcgct cggggcggcg
     1081 acgccgctcg tcaccaggct ttcggtgagc cagcagccgc tcgtcatcag gccgagggcg
     1141 gccgcaacgg ccacccgcgc cagcgccggc actgaaaatg cccgacaaac catgaaaatg
     1201 ccccccgagg gtgccgcgtc tttgtgcgat tcgaatgtga aaaggcctga tgcccgggga
     1261 agatggcgag gggaaggcaa gccccccgat atgctcgagg gggatggctt cacgttgaag
     1321 ccttccccct cttttaaagc cgcatgatcc cggatcacgt ccgggacaag cccttttcgg
     1381 cgaagcggtt cccacccccg gatcaggtcc gggggcaggc tttcgccgga tcatgctcgt
     1441 tgtcccctcc cctggccggt gctagcgtcg cgattgcatc gctcgaaacc gggcaaagac
     1501 ccggcgctac ccaggaggaa ccccaatggc ttcgttcacg aggcgcggtc tcattgcgtc
     1561 caccgccgcc gcatcggcag tcgccggcct tcgcatccag cccggcgccg cccaggcgaa
     1621 ctatccgacc cgcccgatca ccatgctgtg cccctggggc gccggcggcg gcacggacgc
     1681 caccgcgcgc atcgtcgcct cgctgctcga gaaggagctc ggccagccgg tcaacgtcat
     1741 caaccgcacc ggcggctcgg gggtggtcgg ccaccaggcg atcgcctcgg gcgcgcccga
     1801 cggctacacg ctcggcatcc tgaccgtcga gatcagcatg atgcactggc aggggctgac
     1861 cgacctgacg ccgcagagct acacgccgct ggcgctgatg aacgaggacc cgcccggcgt
     1921 gcacgtcaag gcggacgcct accagaacgt caaggagctg gccgaggcga tcaagaaggc
     1981 cccgcccggc aagctcaagg cctcgggcac cggccagggc ggcatctggc acctcgcgct
     2041 ggtcggctgg ctccaggaca tggggttgaa gcccgaccac gtcgcctggg tgccgtcgaa
     2101 cggcgccgcg ccgggcatgc aggacctcgc cgccggcggc gtcgacatcg tgccgtgctc
     2161 gctgccggaa ggacgctcga tcgtcgaggc cggcaaggcc aaggcgctcg ccatcatggc
     2221 gcagcagcgc aaccccgcct tcgccagcgt gccgacgctc aaggaggagc tcggcaccag
     2281 cttcgcgccg accggcgcgt ggcgcggctt cgccggcccg aagggcctgc cgcaggacgt
     2341 cgcgacgaag ctcgtggcgg ccttcaagaa ggtctacgaa tcgaaggaat acaacgagtt
     2401 catgtcgagc cgcggctttg gcgtgcgctg ggccgaggcg aacgccttcg cgcagttca
//
LOCUS       DATAIQ010000937         3000 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_348199, whole genome shotgun sequence.
ACCESSION   DATAIQ010000937 DATAIQ010000000
VERSION     DATAIQ010000937.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3000)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3000)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3000
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_348199"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..291)
                     /gene="infC"
                     /locus_tag="VHN20_15425"
     CDS             complement(<1..291)
                     /gene="infC"
                     /locus_tag="VHN20_15425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010682320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HEX2727209.1"
                     /translation="MPVPQKEGPRANRDIRGVREVQLIDQEGKNHGVMAFFDALKIAE
                     DAGLDLVEIAPNSAPPVCKILDYGKVRVLEQKKQAEARKKQKTVEVKEIKLRP"
     gene            complement(435..1640)
                     /locus_tag="VHN20_15430"
     CDS             complement(435..1640)
                     /locus_tag="VHN20_15430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015931240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEX2727210.1"
                     /translation="MFSAANAHPLAGRTILQIIPELEAGGAERTTVDIAAGLVNVGAR
                     ALVASEGGRLVGELQAKGGIWASFPAASKNPLAMAVNVRRLARLCVEEGVALVHARSR
                     APAWVALGATQRLRLPFVTTYHGRYPARSKIKALYNSVMARGDTIIANSRFTAEHILS
                     VYPQAGDRIRVIHRGTDLSVFAPAAVSPERVEALRASWGVAQHERVVLLAGRLTALKG
                     QKVFIEAAARLKAAGLNDVAFVLAGDHQGRDSYVRDLDAMIAARGLAGVVRRVGHCSD
                     MPAALLASAVATMPSTEPETFGRSAVEAQAMGTPVITSDLGAVPETVLAPPQAPPQER
                     TGWRVPAGDAAALATAIGTALWLGASAREAMARRARAHVEHHFSLERMVSDTLDVYMA
                     LLDGPPHGP"
     gene            1745..2506
                     /locus_tag="VHN20_15435"
     CDS             1745..2506
                     /locus_tag="VHN20_15435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013499888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX2727211.1"
                     /translation="MPQFLDVGSGPATRRIAVLVQPGDGPTVFWLGGFRSDMRSTKAE
                     ALDQWAMRTGRGFVRFDYSGHGESGGRFEEGTISAWLEDTLAVVRTFATGPFVLVGSS
                     MGGWLALLASRALRRRDPGGGATGLVLIAPAVDFTERLMWQQFSPEARRAIEEQGLYL
                     RPSRYSPDPYPITRALIEDGRQHLLLGRTIETGCPVHILQGMQDPDVPWRHALDLVEH
                     LPGDSVSLTLINDGDHRLSRDEDLERLVAAIEDIA"
     gene            complement(2631..2894)
                     /locus_tag="VHN20_15440"
     CDS             complement(2631..2894)
                     /locus_tag="VHN20_15440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1150 domain-containing protein"
                     /protein_id="HEX2727212.1"
                     /translation="MNNEVRNSSVGLSPSDLAALGEGEVAYVKPMQSDEVQRLFPQAP
                     AMDPGLQLFALLSANGTPILLTDSRDAAVANAWAHDLQTVSLH"
BASE COUNT          455 a         1019 c          997 g          529 t
ORIGIN      
        1 ggggcgcaat ttgatttcct tgacctcgac cgttttctgc ttcttgcgcg cctcggcctg
       61 ctttttctgt tcgagaaccc ggaccttgcc gtagtcgagg atcttgcaaa cgggcggagc
      121 ggagttcggc gcgatttcca ccaggtcgag gcctgcgtcc tcggcgatct tgagggcgtc
      181 gaaaaatgcc atcacgccgt ggttcttgcc ctcctggtcg atcaattgga cttcgcggac
      241 gccgcgaatg tcccggttgg cgcgcggccc ctctttctgc gggaccggca tggctctcat
      301 aggtctgcga atggcttcat tctcctcttg tgacggttag cgacgggaac cggtgcgctt
      361 gagccagcgg agtgccgtcg ttcaccgggt gacacgaccg tgcgacaatt cgcacaaagc
      421 atctacaagt caactcacgg gccgtgcggc ggcccgtcga gcaatgccat atagacgtcg
      481 agcgtatcgg acaccatccg ctcgagcgag aaatggtgtt ccacatgggc gcgcgccctt
      541 cgcgccatgg cctccctcgc gctcgccccg agccagagcg cagttccgat ggctgtcgcc
      601 agcgccgccg cgtcgcccgc cgggacccgc cagccggtgc gctcctgcgg gggcgcttgc
      661 ggcggcgcga gcacggtttc ggggaccgcg ccgagatctg acgtgatcac gggcgtgccc
      721 atggcctggg cctcgaccgc cgagcgaccg aacgtctccg gctcggtcga cggcatggtt
      781 gcgacggccg aagcgagcag cgccgccggc atgtcgctgc aatgccccac ccggcgcacg
      841 acgccggcaa ggccgcgggc ggcgatcatc gcgtcgagat cacgcacata gctgtcgcgg
      901 ccctgatgat cgccggcgag cacgaaggcc acgtcgttca ggcctgccgc cttgagccgc
      961 gccgcagcct cgatgaagac cttttgcccc ttgagggcag tcagccggcc ggccaggagc
     1021 accacccgct cgtgctgcgc cacgccccag ctggctcgca gtgcctcgac gcgctccggg
     1081 ctcaccgccg ccggcgcgaa gaccgacagg tccgtgccgc gatggatgac gcggatgcgg
     1141 tcgccggcct gcgggtagac cgacaggata tgctcggcgg tgaagcgcga gttggcgata
     1201 atggtgtcgc cgcgcgccat caccgagttg tagagcgcct tgatcttcga gcgcgccgga
     1261 tagcggccgt ggtaagtcgt gacgaacggc agtctgaggc gttgcgtcgc gccgagcgct
     1321 acccacgcag gcgcccgcga gcgggcatgc acgagcgcca ccccttcctc gacgcatagc
     1381 cgcgccagtc gccgcacgtt gacggccatg gcgagggggt ttttcgaggc tgccggaaaa
     1441 gacgcccaga tgccgccctt ggcctgcaat tcaccgacca ggcggccccc ctcgctggcg
     1501 acgagggccc gtgcgccgac attgacgagg ccggccgcga tgtcgaccgt ggtgcgctcg
     1561 gcgccgccgg cctccagctc gggaatgatt tgcaggatcg tgcggccggc gagcggatgc
     1621 gcgttcgccg cactaaacaa gggcctcctc gcagccggtc gcgccagcga actcaccggt
     1681 ataagagccc tctcagaatc accaccgcac cgtccagtat cgagtgttta ggaccagttg
     1741 atcgatgcca caattccttg atgtcggtag cggccccgcg acgcggcgga tcgccgtcct
     1801 cgtgcagccc ggagatgggc ccaccgtgtt ctggctcgga ggctttcgtt ccgacatgcg
     1861 ttcgaccaag gccgaggccc tggatcaatg ggcgatgcgc acgggccgcg gcttcgtccg
     1921 gttcgattat tccggccacg gcgagtcggg tgggcgcttc gaggagggca ccatatccgc
     1981 atggctggag gacacgctgg cggtcgtcag gactttcgcg accggaccct tcgtgctggt
     2041 cggctcctcg atggggggct ggctggcctt gctcgcgtcc cgcgccctgc ggcgacgtga
     2101 ccccggcggc ggcgcaacgg gcctggtgct gatcgcgccc gcggttgatt tcaccgagcg
     2161 gctgatgtgg cagcaattct cgcccgaggc gcggcgcgcg atcgaggagc agggccttta
     2221 tcttcggccc tcgcgttatt cgcccgaccc gtatccgatc acacgcgcgc tgatcgagga
     2281 cgggcgccag cacctgttgc ttggccgcac catagagact ggctgcccgg tccacatcct
     2341 gcaggggatg caggatccgg acgtgccgtg gcggcacgcc cttgatctcg tggagcacct
     2401 gccgggagac agcgtatccc tgacgcttat caacgacggc gaccaccgct tgtcgcggga
     2461 cgaggacctc gagcggctcg tcgccgcgat cgaagacatc gcctgagccc gatggggtca
     2521 gtggcacccc ttcgcccgga tgcaggcacg atccggcgaa gtcaccaccg cttcgtcgga
     2581 gcatacgatt cgatcggcgg aggccgctgt gattgcgcgc catcccgcga ttagtgcagg
     2641 ctgaccgtct ggaggtcgtg tgcccacgca ttcgccaccg ccgcatcgcg ggaatcggtc
     2701 agaaggatcg gggtgccgtt ggctgacagc agcgcgaata gctgcagccc tgggtccatt
     2761 gccggcgcct gcgggaatag ccgctgcacc tcgtcggact gcatcggctt cacgtaggcg
     2821 acctcgccct cgccgagggc ggccaggtcg ctcgggctca gacccaccga gctgtttctc
     2881 acttcgttat tcatcacgct ctcctcaagc agcgtatcag cttctggttt tttccgtcac
     2941 cgcgatttcg atcttgcgca cggtgcgctc cggctcgggc ctggcgagat cgatcgacag
//
LOCUS       DATAIQ010000938         2761 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_255980, whole genome shotgun sequence.
ACCESSION   DATAIQ010000938 DATAIQ010000000
VERSION     DATAIQ010000938.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2761)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2761)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2761
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_255980"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..530)
                     /locus_tag="VHN20_15445"
     CDS             complement(<1..530)
                     /locus_tag="VHN20_15445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013167798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015116 - sulfate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0008272 - sulfate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SulP family inorganic anion transporter"
                     /protein_id="HEX2727213.1"
                     /translation="MSNLSRLAPPEPSFADLFTPKLVTVLREGYDARKLQADALAAIT
                     VAIVALPLSMAIAIASGTTPDRGLYTAIVAGFVISGLGGSRFQIGGPAGAFIVLVAAT
                     IERHGYDGLVLATMLAGLILMGLGFMRLGTYIKYIPHPVIVGFTTGIALIILASQLRD
                     LFGLTLPGKEPAAFVQ"
     gene            647..1618
                     /locus_tag="VHN20_15450"
     CDS             647..1618
                     /locus_tag="VHN20_15450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010686820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone oxidoreductase"
                     /protein_id="HEX2727214.1"
                     /translation="MVKAVVVQRFGGPEVLSYEDVQVGDPGPGEVRLRQTAIGVNYID
                     TYFRTGMYPANVPFILGNEAAGEVVAVGQGVAEFKPGDRVAYVTTLGGYAEERVIPTK
                     PLVKIPDGITDETAAAMMLKGMTAQYLLHRTYRVKPGDTILFHAAAGGVGLIACRWAK
                     HLGATVIGTAGSEEKAKLARENGCDHVIQYREEDFVARVKEITGGKLCDVVYDGVGKA
                     TFPGSLDCLKPFGLFASFGSASGAIDAFNIGILAQKGSLYVTRPTLTTHIATREGLDE
                     ISSSLFDAVRRGAVKIAINKRARLSEAAEVHRALEGRQTTGATIMRP"
     gene            1622..2254
                     /gene="pncA"
                     /locus_tag="VHN20_15455"
     CDS             1622..2254
                     /gene="pncA"
                     /locus_tag="VHN20_15455"
                     /EC_number="3.5.1.-"
                     /EC_number="3.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012333033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional nicotinamidase/pyrazinamidase"
                     /protein_id="HEX2727215.1"
                     /translation="MSLAPARDDVFLVVDVQYDFLPGGALAVPDGDAVIAPINALAKR
                     FPHVVMTQDWHPRGHASFASTHPGRQPFETVQLAYGEQILWPDHCVQGTRGAAIVESL
                     DVPHCQLILRKGHNAAIDSYSGFMEADRVTATGLGGYLKELGFRRVFCAGLATDFCVA
                     WTALDARRAGFDAYVIEDACRAIDTQGSLARAWADMAAAGVQRMTAAAIA"
     gene            complement(2315..>2761)
                     /locus_tag="VHN20_15460"
     CDS             complement(2315..>2761)
                     /locus_tag="VHN20_15460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012333032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12 methylthiotransferase
                     RimO"
                     /protein_id="HEX2727216.1"
                     /translation="PDLAIRSTFIVGFPGETDEDFEMLLSWLKDVRLERVGCFRYEPV
                     KGAPANDIAAPVADEVKEERWHRFMQAQQQISARLLKAKVGRRIPVIIDEPGSGPGTA
                     KGRSKWDAPEIDGNVYVASRRPLRSGDIVTVKIERADEYDLHGVAV"
BASE COUNT          451 a          879 c          958 g          473 t
ORIGIN      
        1 ttctgaacga aggctgccgg ctccttgccg gggagggtca gcccaaacag gtcgcgtaac
       61 tggctcgcca ggatgatcag ggcgatgccg gtggtgaatc cgacgatcac gggatgcggg
      121 atgtatttga tgtaggtccc gagccgcatg aagccgaggc ccatcaggat cagcccggcg
      181 agcatcgtcg cgagcacgag tccatcatag ccgtggcgct cgatggtcgc ggcgacgaga
      241 acgatgaagg cgccggccgg gccgccgatc tggaatcggc tgccgccgag gccggagatc
      301 acgaagccgg cgacgatcgc cgtgtagagg ccgcggtcag gcgtggtgcc cgaggcgatc
      361 gcgatcgcca tcgacagcgg cagcgccacg atggcgacgg tgatggccgc gagggcgtcg
      421 gcctggagct ttctcgcgtc atagccctcg cgcagaaccg tcacgagctt cggcgtgaac
      481 aggtccgcga agctgggctc cggtggggcc aggcgggaca gattcgacat gatgcttctc
      541 taggcgacgg gcttgcgcgc tgtcgaggct acgaattggc ggtcgccatt gcagaaggcg
      601 caggtgactt cctatgatcg gccggtcaat cgaggggtga gtggcgatgg tgaaggcggt
      661 cgttgtccag cggtttggtg ggcccgaggt gttgtcctac gaggatgtgc aggtgggcga
      721 tcccggcccg ggcgaggtgc gccttcgcca gacggccatc ggcgtcaact acatcgacac
      781 ctatttccgg accggcatgt atccggcgaa cgtccccttc atcctcggaa acgaggcggc
      841 gggcgaggtt gttgcggtgg ggcagggagt ggccgagttc aagcccgggg accgcgtcgc
      901 ctacgtcacc actctaggcg gctatgccga ggagcgggtc attcccacga agccgctcgt
      961 caagatcccc gacggcatca cggacgagac cgccgcagcg atgatgctca agggcatgac
     1021 agcccagtat ctgctgcatc gcacgtaccg ggtgaagccc ggcgacacga tcctgtttca
     1081 cgccgccgct ggcggcgtcg gcctgatcgc atgccgctgg gcgaagcatc tcggagccac
     1141 ggtgatcggc accgccggct ccgaggagaa ggcgaagctg gcgcgcgaga acggctgcga
     1201 tcacgtcatc cagtatcgcg aggaagactt cgtcgcgcgc gtcaaggaga tcaccggcgg
     1261 caagctgtgc gacgtcgtct atgacggcgt cggcaaggcg acgtttccgg gctcgctcga
     1321 ttgcctcaag ccgttcggcc tgttcgcgag cttcggctcg gcgtcgggcg cgatcgacgc
     1381 attcaacatc ggcatccttg cccagaaggg ctcgctctac gtgacgcggc cgacgctgac
     1441 cacgcacatc gctacccgag aagggctgga cgagatttcc tcctctttgt tcgacgccgt
     1501 caggcgcggc gcggtgaaga tcgccatcaa caagcgcgcc cgcctgagcg aggcggcgga
     1561 ggtacaccgc gcccttgaag gccggcagac cacgggcgcg accatcatgc ggccttagga
     1621 gatgtccctc gcgcccgcgc gcgacgatgt ttttctcgtc gtcgacgtgc aatacgattt
     1681 cctgccgggc ggcgcgctcg cggtgcccga tggcgacgcc gtgatcgcgc cgatcaatgc
     1741 gcttgcgaag cgcttcccgc atgtggtgat gacgcaggac tggcatccgc gcggccacgc
     1801 ttccttcgcg tcgacccatc ccggcaggca gccattcgag acggtgcagc ttgcctacgg
     1861 cgagcagatc ctgtggcctg atcactgcgt gcagggcacg cgcggcgcgg cgatcgtaga
     1921 gagcctcgac gtcccgcatt gccagttgat cctgcgcaag ggccacaacg cggcgatcga
     1981 cagctattcc ggtttcatgg aggccgaccg cgtcacggcg acgggtcttg gcggctacct
     2041 caaggagctc ggcttcaggc gcgtattctg cgccgggctc gccaccgatt tctgcgtcgc
     2101 ctggaccgcg ctcgacgccc gccgcgccgg cttcgacgcg tacgtgatcg aggacgcgtg
     2161 ccgggccatc gatacgcaag gctcgctcgc ccgcgcctgg gccgacatgg cggccgcggg
     2221 cgtgcagcgg atgacggcgg cggctatagc ctgacgggac gagtgaaatc tctctcgctg
     2281 ctttccggcg cgagctagcg gtgcgatttg ttgatcagac cgcgacgccg tggaggtcgt
     2341 attcgtcggc gcgctcgatt ttcaccgtga cgatgtcgcc ggaacgcaat ggccggcgcg
     2401 aggcgacgta gacgttgccg tcgatctccg gcgcatccca tttcgagcgc cctttcgcgg
     2461 tccccggacc tgatccgggc tcgtcaatga tcaccgggat gcggcgcccg accttggcct
     2521 tgagcagcct ggcgctgatc tgctgctgcg cttgcatgaa gcgatgccag cgctcttcct
     2581 tgacctcgtc cgccacgggc gcggcgatgt cgttggcggg cgcgcccttg accggctcgt
     2641 agcggaagca gccgacccgt tcgagccgga catccttgag ccatgacagc agcatctcga
     2701 aatcctcgtc ggtctcgccg gggaagccga cgatgaaggt ggagcggatc gcgaggtctg
     2761 g
//
LOCUS       DATAIQ010000939         1502 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_210429, whole genome shotgun sequence.
ACCESSION   DATAIQ010000939 DATAIQ010000000
VERSION     DATAIQ010000939.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1502)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1502)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1502
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_210429"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..299
                     /locus_tag="VHN20_15465"
     CDS             <1..299
                     /locus_tag="VHN20_15465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005105309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HEX2727217.1"
                     /translation="MLLGGKGNISVTANVAPRAMSDLCAAAMRGEAAIARAINDRLMP
                     LHKALFLESNPIPVKWALHEMGLMGDGIRLPLTWLSPRCHEPLRQAMRQCGVLA"
     gene            316..1437
                     /gene="bamC"
                     /locus_tag="VHN20_15470"
     CDS             316..1437
                     /gene="bamC"
                     /locus_tag="VHN20_15470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003112545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamC"
                     /protein_id="HEX2727218.1"
                     /translation="MKRLAGFSALALIVSSTSGCGWLWGENGYFRDRGSDYLEARQTA
                     PMQLPADVQAKRLDPLLPIPAQVASSTATPAEFEVPRPQGLQVRADEREFSLQRSGDS
                     RWVVAQRVPAEVWPLARQFFEDNGFRIASERPQTGEFITSWQRFDELSTSMARSLSSR
                     VSGVASDAETRVRVRIEPGVQRNTSEVFVTSAERPAGSTADVDFAARSGNASLEAALL
                     DEMLVSMTRGVEQGGSVSLLAARDYDAPSRVSLSEDGNGNPVLNLGADFDRAWSGVGR
                     SLELGNVRVDDLNRSLGLYYINMAEGAQVNEEKPGFFGRMFGSAPSKEEIEARAERYQ
                     VRLTPVGDGVQVTVEKDLNTIAPAEVSRRVLSLIQDNLG"
BASE COUNT          270 a          498 c          477 g          257 t
ORIGIN      
        1 tgatgctgct gggcggcaag ggcaacatct ctgtcaccgc caacgttgcg ccgcgtgcca
       61 tgagcgacct gtgcgcggct gccatgcgtg gcgaggcggc catcgcccgc gccatcaacg
      121 accgtctgat gccgctgcac aaggcactgt tcctcgaatc caacccgatt ccggtgaaat
      181 gggcgctgca cgaaatgggt ctgatgggcg acggtattcg tctgccgctg acctggctca
      241 gcccgcgctg tcacgaaccg ctgcgccagg ccatgcgcca gtgcggtgta ttggcttaac
      301 tcaaggattc tacgcatgaa gcgactggcc ggattttccg cccttgctct gatcgtctcc
      361 agcaccagcg gttgtggctg gctctggggt gaaaatggct acttccgtga tcgcggtagc
      421 gactacctgg aagcacgcca gaccgcaccg atgcaattgc cggccgacgt ccaggccaag
      481 cgcctcgacc cgttgctacc gatacctgcc caggtcgcca gcagtactgc gactccggcc
      541 gaattcgaag tgccgcgccc gcaaggcctg caggtacgtg ccgacgagcg cgagttcagc
      601 ctgcagcgca gtggcgactc gcgctgggtc gtggcccagc gcgtgccggc cgaagtctgg
      661 ccgctggcgc gtcagttctt cgaagacaac ggttttcgca tcgccagcga gcgtccgcaa
      721 accggcgaat tcatcacctc ctggcagcgt ttcgatgagc tctccacgag catggcgcgc
      781 agtctgagca gccgcgtttc tggcgtggcg tcggacgccg aaacccgcgt gcgcgtgcgc
      841 atcgagccgg gcgtacagcg caacaccagt gaagtcttcg tcaccagcgc cgagcgtcct
      901 gccggcagca ccgccgatgt cgattttgct gcccgtagcg gcaacgccag cctcgaagct
      961 gcactgctcg acgaaatgct ggtgagcatg acccgtggcg tggagcaggg cggctcggta
     1021 tcgctgctcg ccgcgcgcga ctacgatgcg cccagccgcg tcagcctgag cgaagacggc
     1081 aacggcaacc cggtgctcaa cctcggcgcc gatttcgacc gcgcctggtc cggcgtcggc
     1141 cggtcgctgg aactcggcaa cgtgcgcgtc gacgacctca accgcagcct tggcctgtac
     1201 tacatcaaca tggccgaggg cgctcaggtc aacgaggaga agccgggctt cttcggtcgc
     1261 atgttcggca gcgcgccgag caaggaagag atcgaagccc gcgccgagcg ctaccaggtg
     1321 cgcctgactc cagttggcga tggcgtccag gtcaccgtgg aaaaagacct caacaccatt
     1381 gctccggctg aggtatcgcg ccgcgtgctg agcctgatcc aggataatct cggctgatca
     1441 gtgccagcag gccgttgaaa aacggcctgc agcgcgctac agccgtcaat cgatgggcga
     1501 aa
//
LOCUS       DATAIQ010000940         1612 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_69288, whole genome shotgun sequence.
ACCESSION   DATAIQ010000940 DATAIQ010000000
VERSION     DATAIQ010000940.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1612)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1612)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1612
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_69288"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            499..>1612
                     /locus_tag="VHN20_15475"
     CDS             499..>1612
                     /locus_tag="VHN20_15475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727219.1"
                     /translation="MAVNDAPQAADDLAGRFLVDPYLDWANGEGIPVHLDFGHDLLSL
                     ETGRWDRYDARGCFAHTHGRGDFMANYVIEVPAGSKTRPVKHLYEAFFYTLSGSGSTV
                     IWLPNGEKQSFEWGPKALFAIPLNCSYQIFNASGHEPARLSCTNDAPLTLNLYHNVGF
                     VFDNPCTFPERVGPARHWEGEGEHVPVVRPGAATLNIWETNFVADLTGFKLYELHERG
                     KGSLNMSFVLADGTMHAHSSQIPTGRYKKAHRHAAGTHVHAVDGEGYTLLWYEGDSEF
                     KEFPWKHGFMYTPPFWMFHQHFNTCDHPARYLACSLGSRRYPLISLRKKSAEGQGSTP
                     IQQGGRQIEFEDQDPRIHRKWLEAIRETGVRSQMGDI"
BASE COUNT          282 a          530 c          526 g          274 t
ORIGIN      
        1 cctgtcgcgc gcctgcgcgc tcgcctcgtg cccgctggcg gcttcgacgg tcagatggac
       61 gtcaaggctg ccgatcgctt ccgatgtgtt gcgaaagtgg cgacggagcg cgcgtcgatg
      121 cgttccacgc tcttcaggcg aaccgtacag tccatgcggc aagtccttcg aaacgctcgc
      181 cgcggacgac ctggccggcg gcattgtggg aggtgaacga ggcagcctcg gcaaggttcc
      241 ggtgagcccg gggtccgctg gcgtcagaga cccgctggcg gcggctgctt cgaattcgta
      301 gcgattccct gccggccgag gcaaccgagg aacggcgtgg cggcgcccct gacggggcgc
      361 ggtcgagcag gcacctcccg gacagcccct gcctttacga cctgtgccgc cgctgataac
      421 gaacgcccga ccacgcggcc ggccacggag gcagggcccg cgcgaaagac gtccgacgac
      481 aatggtttga aaggggtgat ggccgtgaat gatgcgccgc aagcagccga cgacctggcc
      541 ggcagattcc tggtcgatcc gtatctcgac tgggccaacg gcgagggaat cccggttcat
      601 ctcgatttcg ggcacgacct cctctcgctc gagaccggcc gctgggaccg ctacgacgca
      661 cgtggctgct tcgcgcatac gcacgggcgc ggcgacttca tggccaacta cgtgatcgag
      721 gtgccggccg gctctaagac gcggccggtc aagcatctct acgaggcttt cttctacacg
      781 ctctcgggct ccggctcgac cgtgatctgg ctgccgaacg gcgagaagca gagtttcgaa
      841 tgggggccga aggcgctgtt cgcgatcccg ctcaactgca gctaccagat cttcaacgcg
      901 tccgggcacg agccggcgcg gctgtcatgc accaacgacg cgccgctcac gctcaatctc
      961 tatcacaatg tcggtttcgt attcgacaac ccgtgcacgt ttccggagcg cgtcgggccg
     1021 gcgcggcatt gggaagggga aggcgagcat gtgccggtcg tgcggccggg cgctgcgacg
     1081 ctcaatatct gggagaccaa cttcgtcgcc gatctcaccg gcttcaagct ttatgagctc
     1141 cacgagcgcg gcaagggctc gctcaacatg tcgttcgtgc tggcggacgg caccatgcac
     1201 gcgcattcgt cgcagatccc gaccggccgc tacaagaagg cgcatcgtca tgctgccggc
     1261 acgcatgtgc atgcggtcga cggcgaaggc tacacgctgc tctggtacga gggcgattcc
     1321 gagttcaagg aattcccctg gaagcacggc ttcatgtaca cgccgccgtt ctggatgttc
     1381 caccagcact tcaacacctg cgaccatccc gcgcgctatc tcgcctgcag cctcggcagc
     1441 cggcgttatc cgttgatctc gctgcgcaag aagagcgccg agggacaggg ctccaccccg
     1501 atccagcagg gcgggcggca gatcgagttc gaggatcagg atccgcgcat ccaccggaaa
     1561 tggctggagg cgatccgcga gaccggcgtt cgctcacaga tgggcgatat ct
//
LOCUS       DATAIQ010000941         1911 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_210479, whole genome shotgun sequence.
ACCESSION   DATAIQ010000941 DATAIQ010000000
VERSION     DATAIQ010000941.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1911)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1911)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1911
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_210479"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..217)
                     /locus_tag="VHN20_15480"
     CDS             complement(<1..217)
                     /locus_tag="VHN20_15480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727220.1"
                     /translation="MLLIITRPAAMTTGPNSFFISCSLSLNDWRAPALESMIRRKPAP
                     DLIRGGDRFAEKIMRPNKVRAGSIRSEA"
     gene            216..440
                     /locus_tag="VHN20_15485"
     CDS             216..440
                     /locus_tag="VHN20_15485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727221.1"
                     /translation="MAEAACVTTRNGIRSTTVCNGVVTKRYGNRSVTYGPGGTVTRRH
                     GTRSATYGRGYTTYRRGPRSVTYQTRPWYY"
     gene            560..721
                     /locus_tag="VHN20_15490"
     CDS             560..721
                     /locus_tag="VHN20_15490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727222.1"
                     /translation="MAEQETSKDVLQADNIVRDDGLRIAGVLYVTVLFFLGLAAYLYW
                     HGTGKLPWQ"
     gene            complement(726..1277)
                     /locus_tag="VHN20_15495"
     CDS             complement(726..1277)
                     /locus_tag="VHN20_15495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015665371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent catabolism-associated CXXCW motif
                     protein"
                     /protein_id="HEX2727223.1"
                     /translation="MRRARALAGSVALCVVLLSAATAQTDAPPEPDGYRMQDYRARVP
                     ATLRGATVLDTAAALALWKEGASVFVDVLPRVSKPANLPAGTVWRDPRHESLPGAIWL
                     PNTGYGVLGAAADAYFRHGLEKASKGDMNVQMVFFCQRDCWMSWNAARRALDYGYRRV
                     AWFPDGTDGWAEAGLPLRLVEPE"
     gene            complement(1274..>1911)
                     /locus_tag="VHN20_15500"
     CDS             complement(1274..>1911)
                     /locus_tag="VHN20_15500"
                     /inference="COORDINATES: protein motif:HMM:TIGR03871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="quinoprotein dehydrogenase-associated putative
                     ABC transporter substrate-binding protein"
                     /protein_id="HEX2727224.1"
                     /translation="RYYWLSQGPGFVANTLGARLCDVVMGYAAGAEPVQSSNPYYRSA
                     YVLVVRRGGGLDGVDRLGDPRLAGKRVGVIAGTPPADHLLEEGLLATAKYYALLVDRR
                     YEFPAAEMIADLAAGRIDGALLWGPIGGYLARRASDPLTVVPLVHERDRPPLAYRITL
                     GMRHNELEWKRRLNDIIRKRQGDFDRVLLDFGVPLLDDDDRPITAPRVAAR"
BASE COUNT          306 a          685 c          649 g          271 t
ORIGIN      
        1 tcgcttcaga tcgaatcgat cccgctctga ctttgttggg gcgcatgatc ttttcggcga
       61 agcggtctcc accccggatc aagtccgggg caggctttcg ccggatcatg ctctcaagcg
      121 ctggcgcgcg ccagtcattg agagagaggg aacacgagat gaagaagctg ttagggcctg
      181 tcgtcatggc cgccggcctt gtgatgatca gcagcatggc cgaggccgca tgcgtgacca
      241 cccgcaacgg gatccggtcg acgaccgtgt gcaacggcgt cgtcaccaag cgctacggca
      301 accggtcggt cacctacggc cccggcggca ccgtcacccg ccgtcacggg acccggtccg
      361 ccacctacgg ccggggctac acgacctatc gccgcggccc gcgctcggtc acctaccaga
      421 cccgtccctg gtattactga gcgccgcgcg cccactgccg gcatgagccg acgcccgcag
      481 ccgcgagcct ccgcctcgcg gctgctggcc tttgcgttgc ccaccgaggc gccatccccg
      541 agcgcgccgg gacatgaccg tggctgagca agagacttcc aaagacgtcc tgcaagcgga
      601 caacatcgtc cgcgacgacg gcctgcgcat cgccggcgtg ctctacgtga ccgtgctgtt
      661 cttcctcggc ctcgccgcct acctctactg gcacggcacc ggaaaactgc cctggcaata
      721 gctgcctatt caggctccac gaggcgcagg ggcaggccgg cctcggccca gccatcggtg
      781 ccgtcgggaa accaggcgac gcggcggtag ccgtagtcga gcgcgcgcct cgcggcgttc
      841 cacgacatcc agcaatcgcg ctgacagaag aagaccatct gcacgttcat gtcgcccttg
      901 ctcgccttct cgagcccgtg ccggaaatac gcgtcggcgg cggcgcctag cacgccgtag
      961 ccggtgttcg gcagccagat cgcgccgggc aggctctcgt ggcgcgggtc tcgccacacc
     1021 gtcccggccg gcaggttggc gggcttcgac acgcgcggca ggacgtcgac gaacaccgac
     1081 gcgccctcct tccacagggc cagcgcggcc gccgtgtcga gcaccgtcgc gccgcgcagg
     1141 gtcgccggca cgcgcgcgcg gtaatcctgc atgcggtagc cgtcgggctc cggcggcgca
     1201 tcggtctgcg ccgtcgcggc cgacagcaag acgacgcaca acgcgacaga tccagcgagc
     1261 gcgcgcgcgc gcctcatcgc gctgcaacgc gcggcgccgt gatcggacgg tcgtcgtcgt
     1321 cgagcagcgg cacgccgaaa tcgagcagca cgcggtcgaa atcgccctgc cgcttgcgga
     1381 tgatgtcgtt aaggcggcgc ttccactcga gctcgttgtg gcgcatgccc aacgtgatcc
     1441 ggtaggcgag gggcgggcgg tcgcgctcgt gcacgagggg gaccacggtg agggggtcgg
     1501 acgcgcgccg ggcgagatag ccgccgatcg gcccccacag cagcgccccg tcgatgcgcc
     1561 cggcggcgag atcggcgatc atctcggcgg cgggaaactc gtaacggcga tcgaccagca
     1621 gcgcgtaata cttggcggtg gcgagcaggc cctcctcgag cagatgatcc gccggcggcg
     1681 ttcccgcgat gacgccgacg cgcttgcccg cgagacgcgg atcgccgagg cggtcgacgc
     1741 cgtcgaggcc gccaccgcgc ctgacgacca gcacgtaggc cgagcggtaa tacggattcg
     1801 agctctggac cggctcggcg ccggcggcgt agcccatcac cacgtcgcag agcctggcgc
     1861 cgagcgtgtt ggcgacgaag ccggggcctt gcgacagcca gtagtagcgc a
//
LOCUS       DATAIQ010000942         2951 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_256109, whole genome shotgun sequence.
ACCESSION   DATAIQ010000942 DATAIQ010000000
VERSION     DATAIQ010000942.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2951)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2951)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2951
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_256109"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..805
                     /gene="priA"
                     /locus_tag="VHN20_15505"
     CDS             <1..805
                     /gene="priA"
                     /locus_tag="VHN20_15505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012252702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005658 - alpha DNA polymerase:primase
                     complex [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0003688 - DNA replication origin binding
                     [Evidence IEA];
                     GO_function: GO:0016818 - hydrolase activity, acting on
                     acid anhydrides, in phosphorus-containing anhydrides
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HEX2727225.1"
                     /translation="VCHHCGHVERRPGACISCGSIDSLVSCGPGVERIAEEVAGLFPD
                     KRTIVLSSDFPGGTERLRQELAAIAEGAFDIVIGTQLVAKGHNFPRMTLVGVLDADIG
                     LTSGDPRAAERTFQLLQQVAGRAGRGIGTGRALVQTYQPEHPVIAALVSGDAERFYRE
                     ETHARQAAGLPPYGRLAALVVSASERDKAEEHARAMARVADAPPGVMVLGPAEAPLAL
                     IRGRYRYRLLVKTGRDIDLQAYLRAWLARTPKVRGSVRVEIDVDPQSFL"
     gene            865..1260
                     /locus_tag="VHN20_15510"
     CDS             865..1260
                     /locus_tag="VHN20_15510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009762897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX2727226.1"
                     /translation="MSPNPIPRPVAIPTILVVDDEVIARTVIASYLRECGYRVIEAGN
                     QDDAMTILDSDLRIDIVFTDLELPGHGTGLELARWIRRRHPQIKVIVTSGHHSAAELA
                     GELCDAGPPIVKPYHSDAVVERIRRLSAH"
     gene            1441..2013
                     /locus_tag="VHN20_15515"
     CDS             1441..2013
                     /locus_tag="VHN20_15515"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015933678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HEX2727227.1"
                     /translation="MPRNGSQTETVVSGVAGRYASALFDLAREQRQVDAVLADLDRFE
                     ALWRDSDDLQRLVRSPVFTAEEQERALGAILDKAGIGGFAGNFIKLVAANRRLFALPD
                     MIRAYRMLVADFRGIVRAQVTVAEPPSERIMGDIKSALRDVAKAEVDVDIRVDPGLIG
                     GIVVKIGSRMVDASLRTKLNSIKLAMKEVR"
     gene            2013..>2951
                     /gene="atpA"
                     /locus_tag="VHN20_15520"
     CDS             2013..>2951
                     /gene="atpA"
                     /locus_tag="VHN20_15520"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008961301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HEX2727228.1"
                     /translation="MDIRAAEISAILKQQIQNFGQEAEVTEVGQVLSVGDGIARCYGL
                     DKVQAGEMVEFESGVRGMALNLETDNVGVVIFGSDREIKEGQTVKRTGAIVDVPVGKG
                     LLGRVVDALGNPIDGKGPIQAAERRRVDVKAPGIIPRKSVHEPMATGLKAVDALIPIG
                     RGQRELIIGDRQTGKSAIALDTILNQKPLNASGNEKVKLYCVYVAVGQKRSTVAQFVK
                     TLEENGALDYSIVVAATASDPAPMQFLAPFAGCAMGEFFRDNGMHAVMSYDDLSKQAV
                     AYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMS"
BASE COUNT          472 a         1057 c          976 g          446 t
ORIGIN      
        1 ggtctgtcat cattgcggcc atgtggagcg ccggcccggc gcctgcatct cctgcggcag
       61 catcgactcg ctcgtctcct gcggtccggg cgtcgagcgc atcgccgagg aagtggcggg
      121 cctctttccc gacaagcgca ccatcgtgct gtcgagcgat ttcccgggcg gcaccgagcg
      181 cctgcggcag gagctggcgg cgatcgccga gggcgccttc gacatcgtca tcggcacgca
      241 gctcgtcgcc aagggccaca acttcccgag gatgacgctg gtcggcgtgc tcgacgccga
      301 tatcgggctg acctccggcg acccgcgcgc cgcggagcga actttccagc tgctgcagca
      361 ggtggctggc cgcgccgggc gcggcatcgg caccgggcgt gcgctcgtgc agacctacca
      421 gccggagcat ccggtgatcg cggcgctggt ctcgggcgac gccgagcgct tctaccgcga
      481 ggagacccac gcccgccagg cggccggcct gccgccttac gggcgcctcg ccgccctcgt
      541 cgtctcggcc agcgagcgcg acaaggccga ggagcatgcc cgcgccatgg cgcgcgtcgc
      601 cgatgcgccg cccggcgtga tggtgctcgg tcccgccgaa gcgccgctgg cgctgatccg
      661 cggccgctac cgctaccgcc tgctcgtcaa gaccggacgc gacatcgacc tgcaggccta
      721 tctgcgcgcc tggctggcgc gcacgccaaa ggtccgcggc agcgtcaggg tcgagattga
      781 cgtcgatccg cagagctttc tctgatcaag cttgacagtt cgtttcgcag cgcggaaatg
      841 ttccgggaaa ggcggccccc atccatgtca ccgaacccga tcccgcggcc cgtggccatc
      901 ccgaccatcc tcgtcgtcga cgacgaggtc atcgcccgca ccgtgatcgc cagctacctg
      961 cgcgagtgcg gctaccgggt gatcgaggcc ggcaaccagg acgacgccat gacgatcctc
     1021 gattccgacc tgaggatcga catcgtcttc acagacctcg agctgcccgg gcatgggacg
     1081 gggctcgagc tggcgcgctg gatccggcgg cgccatccgc agatcaaggt gatcgtcacg
     1141 tcgggccacc acagcgccgc cgagctcgcc ggcgaattgt gcgacgccgg gccgccgatc
     1201 gtgaagccct accacagcga cgcggtcgtc gagcgaatcc gcagactttc ggcgcattag
     1261 ccgcgtcacg gggggcaaag cggggctcct cgccttgcac cccccaaaaa cccgtgctag
     1321 gggcacacgc gccttcgggc gggagctttt ccccgcgatc gtgccattcc ttgactgacg
     1381 cgttgcagcc gccgccgtcc aggcgcgatc aggctcatgc gtgagagctg agagagatca
     1441 gtgcctcgaa acggttcgca gaccgaaact gtcgtatcgg gcgtggcggg gcggtacgcc
     1501 tccgcgttgt tcgacctggc gcgggagcaa cggcaggtcg atgccgtcct ggccgatctc
     1561 gatcgctttg aggcgctctg gcgcgacagc gacgacctgc agcgcctcgt caggagcccg
     1621 gtcttcacgg ctgaggagca ggagcgcgcc ctcggcgcca tcctcgacaa ggccggcatc
     1681 ggcggcttcg ccggcaactt catcaagctc gtcgccgcca accggcgcct gttcgccctg
     1741 cccgacatga tccgcgccta ccggatgctg gtggccgact tcaggggcat cgtgcgcgcc
     1801 caggtgaccg tcgccgagcc gccctccgag cgcatcatgg gcgacatcaa gtccgccctg
     1861 cgcgacgttg ccaaggccga ggtcgacgtc gatatccgcg tcgacccggg cctgatcggc
     1921 ggcatcgtcg tcaagatcgg cagccgcatg gtcgacgcct cgctccgcac caaactcaat
     1981 tcaatcaagc ttgccatgaa agaggtccgc tgatggacat ccgcgccgct gaaatctccg
     2041 ccatcctcaa gcagcagatc cagaacttcg gccaggaggc ggaggtcacg gaagtcggtc
     2101 aggtgctgtc ggtgggcgac ggcatcgcgc gctgctacgg cctcgacaag gtccaggccg
     2161 gcgagatggt cgagttcgag tcgggcgtgc gcggcatggc cctcaacctc gagaccgaca
     2221 atgtcggcgt cgtcatcttc ggctccgacc gcgagatcaa ggaaggccag accgtcaagc
     2281 gcacgggcgc catcgtcgac gtgccggtcg gcaagggcct gctcggccgc gtcgtcgacg
     2341 cgctcggcaa cccgatcgac ggcaagggcc cgatccaggc ggcggagcgc cgccgcgtcg
     2401 acgtcaaggc gcccggcatc atcccgcgca agtcggtgca cgagccgatg gcgaccgggc
     2461 tcaaggcggt cgacgcgctg atcccgatcg gccgcggcca gcgcgagctg atcatcggcg
     2521 accgccagac cggcaagtcg gcgatcgccc tcgacaccat cctcaaccag aagccgctca
     2581 acgccagcgg caacgagaag gtcaagctct actgcgtcta cgtggccgtc ggccagaagc
     2641 gctcgaccgt cgcccagttc gtcaagacgc ttgaggagaa cggcgcgctc gactactcga
     2701 tcgtcgtcgc cgcgaccgcg tccgacccgg ccccgatgca gttcctggcg ccgttcgccg
     2761 gctgcgccat gggagagttc ttccgcgaca acggcatgca cgcggtgatg agctacgacg
     2821 acctctccaa gcaggccgtc gcctaccgtc agatgtcgct gctgctgcgt cgcccgccgg
     2881 gccgcgaggc ctatcccggc gacgtgttct acctgcactc gcggcttctc gagcgcgcgg
     2941 cgaagatgag c
//
LOCUS       DATAIQ010000943         2604 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_348810, whole genome shotgun sequence.
ACCESSION   DATAIQ010000943 DATAIQ010000000
VERSION     DATAIQ010000943.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2604)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2604)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2604
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_348810"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..768)
                     /locus_tag="VHN20_15525"
     CDS             complement(<1..768)
                     /locus_tag="VHN20_15525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727229.1"
                     /translation="MPFHDRARPRPRALMIAPLVPARTGNGLAMRLGIFLEALAQVAE
                     VDLVVPALTPAGLPHALGVMMGGFPTEQSVDTHFDMVLRLRDKQAQLAAFRAYGRPSY
                     AARVTPAALSYMRALGRGQAYDLVHVGRIYMAEAGLAAAGAASRLSLDLDEDEQASLT
                     TIADMCARNGDHDRAEWHRIDAAALDRMLARLAPGFERVWISNHDDRATLMARHQGLA
                     PVVACNAVEVPSAPARRDDGSTLLFVGAFGYEPNVEGV"
     gene            complement(786..>2604)
                     /locus_tag="VHN20_15530"
     CDS             complement(786..>2604)
                     /locus_tag="VHN20_15530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012497687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HEX2727230.1"
                     /translation="DLEVGRRFHVIMIKPSHYDDDGYVIQWVRSVIPSNSLACVFGLA
                     RDCAERRVLGDDVEIVLHALDETNTRVRPDRLARLIQGGDRGVVMLIGVQSNQFPRAL
                     DIARAFLARGVQVVIGGFHVSGVIAMLDGADPDLDRARAMGVSLFAGEAEGRLEQVLE
                     DAFAGTLKPLYDHMNDLPGLDDAPIPILPAHVVQRTIGRVTSFDAGRGCPYQCSFCTI
                     INVQGRKSRRRSPDDVEKIIRANVAQGLRDFFVTDDNFARNKDWEPILDRLIFMRRIE
                     RLGFTLTIQVDTLCHRIPRFIEKCALAGVKVAYIGLENINPQNLIGAKKRQNKITEYR
                     ELLLKFKAVGIMTYAGYILGFPNDTADSILHDLEVIKRELPLELLEVFYLTPLPGSED
                     HQKLHRGGVAMDPDLNKYDLTHRTTGHARMTAEEWDRAYWLAWQRYYTWEHVETIVRR
                     AATGRPGRFRVNLDATVADIGWFKGAIEIEGIHPLEVGLFRRKYRRDRRPECGIEPAW
                     RFYPRTIAEIVVKQARWATLAVRLVRLWSRVRRDPKRYEYMDTAITPVTGHDVDTYEM
                     FQSDAARAYVGHERRLEEIRSGHPRPAAATERTAEPLAG"
BASE COUNT          413 a          862 c          917 g          412 t
ORIGIN      
        1 caccccttcg acgttcggct cgtagccgaa cgcgccgacg aagagcaggg tcgacccgtc
       61 gtcgcggcgc gccggcgcgg aggggacttc gacggcattg cacgccacga ccggcgcgag
      121 gccctgatga cgggccatga gcgtggcgcg gtcgtcgtgg ttcgagatcc agacgcgctc
      181 gaagcccggc gccagcctcg cgagcatgcg gtcgagagcg gcggcgtcga tgcggtgcca
      241 ttcggcccgg tcgtgatcgc cgttgcgcgc gcacatgtcg gcgatggtcg tcagggacgc
      301 ctgctcgtcc tcatcgagat cgagcgacag gcgcgacgcc gcgcccgcgg cagcgagccc
      361 cgcctcggcc atgtagatgc gcccgacgtg gacgaggtcg taggcctgcc cccggccgag
      421 cgcgcgcatg tagctgagcg ccgccggcgt cacgcgcgcc gcgtagctcg gccggccata
      481 cgcgcggaaa gcggccagtt gcgcttgctt gtcgcgcaac cgcaggacca tgtcgaaatg
      541 cgtgtcgacc gactgctccg tcgggaaccc gcccatcatg acgccgagtg catgcggcag
      601 cccggccggc gtcagcgccg gcacgacgag atcgacctcg gcaacctggg ccagcgcctc
      661 gaggaaaatg ccgaggcgca tggcaagccc gttgccggtg cgggcaggta cgagcggcgc
      721 gatcatcagc gcgcgtggcc ggggccgcgc gcggtcatgg aacggcatgt cgtcgtccag
      781 cgacctcaac ccgccagcgg ctccgccgtc cgctcggttg ccgccgccgg ccgcgggtgg
      841 ccgctgcgga tctcctccag ccggcgctcg tgcccgacat aggcccgggc cgcgtcggac
      901 tggaacatct cgtaggtgtc gacgtcgtgc ccggtgaccg gcgtgatggc cgtgtccatg
      961 tattcgtagc gcttcgggtc gcgccgtacc cggctccaca gccgcacgag acggacggcc
     1021 agcgtcgccc atctcgcctg tttcacgacg atctccgcga tcgtgcgcgg gtagaagcgc
     1081 cacgccggct cgatgccgca ctccggccgg cgatcacggc ggtatttgcg ccggaacagg
     1141 ccgacctcga gggggtggat gccctcgatc tcgatggcgc ccttgaacca gccgatgtcc
     1201 gccaccgtcg cgtcgagatt gacgcggaac cggccggggc ggccggtggc ggcgcggcgc
     1261 acgatcgtct ccacatgttc ccacgtgtaa tagcgctgcc acgcgagcca gtaggcgcgg
     1321 tcccactctt cggccgtcat gcgcgcatgg ccggtggtgc ggtgcgtcag atcgtatttg
     1381 ttgagatcgg gatccatggc cacgccgccg cggtggagct tctggtggtc ctcggaaccg
     1441 ggcagcgggg tcagatagaa cacctcgagc agctccagcg gcagctcgcg cttgatcacc
     1501 tcaaggtcgt gcaggatcga gtcggccgta tcgttgggga agccaaggat gtagccggca
     1561 taggtcatga tgccgacagc cttgaacttg agcagaagct cgcggtactc ggtgatcttg
     1621 ttctgccgct tcttggcccc gatcaagttc tgcggattga tgttctcgag gccgatatag
     1681 gcgaccttga cgccggcgag cgcgcacttc tcgatgaagc gcggaatgcg gtgacagagc
     1741 gtgtcgacct ggatcgtgag cgtgaatccg aggcgctcga tgcggcgcat gaagatcagg
     1801 cggtcgagga tcggctccca gtccttgttg cgggcaaaat tgtcgtcggt gacgaagaag
     1861 tcgcgcaaac cctgcgcgac attggcgcga atgatcttct cgacgtcgtc gggcgagcgg
     1921 cggcgcgact tgcgtccctg gacgttgatg atggtgcaga acgagcactg gtagggacag
     1981 cctcgcccgg cgtcgaagct cgtcacgcgg ccgatcgtgc gctgcaccac atgcgccggc
     2041 aggatcggaa tgggggcgtc gtcgagcccg gggaggtcgt tcatatggtc gtaaagcggc
     2101 ttcagggtgc ccgcgaacgc gtcctcgaga acctgctcaa ggcgcccttc ggcctcgccg
     2161 gcgaacagcg acacgcccat ggcccgggcg cggtcgaggt ccgggtcggc gccgtccagc
     2221 atggcgatca cgccggagac gtggaagccg cctatgacga cctgcacgcc gcgcgccagg
     2281 aaggcgcggg cgatgtcgag ggcgcgcgga aactggttcg attgcacgcc gatgagcatg
     2341 accacgccgc ggtcgccgcc ttggatcaac ctggcgagcc tgtccgggcg gacgcgggtg
     2401 ttggtctcgt ccagggcgtg caggacgatc tcgacgtcgt cgccgagcac ccggcgctcc
     2461 gcgcaatccc gggcaagccc gaacacgcat gcgagcgagt tcgacgggat caccgagcgc
     2521 acccactgga tcacgtagcc gtcgtcgtcg taatgcgacg gcttgatcat gatcacatgg
     2581 aagcgccgtc ccacctcaag gtcc
//
LOCUS       DATAIQ010000944         5429 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_162314, whole genome shotgun sequence.
ACCESSION   DATAIQ010000944 DATAIQ010000000
VERSION     DATAIQ010000944.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 5429)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5429)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5429
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_162314"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1130
                     /locus_tag="VHN20_15535"
     CDS             <1..1130
                     /locus_tag="VHN20_15535"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX2727231.1"
                     /translation="GGLMTLSQALIGETVPPRERGRYQGYLAANAVSASTFGPVVGGF
                     LTEHFGWEAVFLVNVPLGVLAVALTFRLRPLPGSGGARRFDILGLVLFVLFVAPVLLA
                     VEQAQRVRWDTLPGVLGLVAVGVASFVLLIRHEKRAASPLLPIGLFRQAAIWRSDAMA
                     AFHGATLVSLLTFMPLYLRIVRGVSASETGLLLLPLTAGIGFGAVLTGQIITRTGRTA
                     ILPSVGLIVVVLTLVFLAVRAPALSNTAIVVLLAVNALFMGTVMGVVQITVQTVAGRE
                     RVGAAAGSVQFSRSVGAAFGTAAVGGVLFATLAVMDPEAPRLLERLLEHGTGVFASLP
                     AARQAVVRSEIVLAFQAAFLTIAAFAAGALVLAWSIPVRRV"
     gene            1176..1787
                     /locus_tag="VHN20_15540"
     CDS             1176..1787
                     /locus_tag="VHN20_15540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006203039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family translocator"
                     /protein_id="HEX2727232.1"
                     /translation="MSIDFLITSLIVVASPGTGVLYTLAAGLSRGRRASVVAAFGCTF
                     GIVPHMAAAIMGVAALLHASALAFQIHKYLGVAYLLYMAWSTLREHGPLRLEGEIGPR
                     SDMHVITTAVLINILNPKLSIFFFAFLPQFVSAGEPHPLTRMLELSAVFMLLTFAVFV
                     AYGLCAAAARRHVISRPQVLVWLRRAFAGAFAALGARLALAER"
     gene            complement(1812..2615)
                     /locus_tag="VHN20_15545"
     CDS             complement(1812..2615)
                     /locus_tag="VHN20_15545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018445032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX2727233.1"
                     /translation="MKPALDKARVADGTQIAYRLREGGAKRVVLIHSLAMDHSFWDPV
                     AERLADAASILTFDCRGHGASDKPPGPYTAELFARDLAALMDHVGWQSAVVAGCSMGG
                     CVALAFVAAYPERVQALGLFDTTAWYGPEAPQQWGERADRATASGLDGLVEFQTTRWF
                     GDRFREDRADVVRRSVNVFLANDRRAYAETCRMLGVCDVRAALPRINVPTRILVGEED
                     YATPLDMAKSLQAGIPGSSLTVLTGARHLTPLEIPDQVADEIRMLVDGA"
     gene            2722..3015
                     /locus_tag="VHN20_15550"
     CDS             2722..3015
                     /locus_tag="VHN20_15550"
                     /inference="COORDINATES: protein motif:HMM:NF015925.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase family
                     protein"
                     /protein_id="HEX2727234.1"
                     /translation="MSIIRLIITTVPAEFARQAETNWKEKCAPIMIRQPGCLSEKMLR
                     CETTPGEYISYSEWEDEASIQRYLQSEDHREIKRHNTNIEGAKVVVKHYCLVR"
     gene            complement(3238..3528)
                     /locus_tag="VHN20_15555"
     CDS             complement(3238..3528)
                     /locus_tag="VHN20_15555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013166575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HdeA/HdeB family chaperone"
                     /protein_id="HEX2727235.1"
                     /translation="MRVLCATLFAAFLMPAVPATSQVLDLSTITCKDFFESSGSNISH
                     TLAWLDAYYRDEDSPPVVDFDKMKADGQKLGEYCAKNPTVGLITAADKLFDK"
     gene            complement(3673..4596)
                     /locus_tag="VHN20_15560"
     CDS             complement(3673..4596)
                     /locus_tag="VHN20_15560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014332820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX2727236.1"
                     /translation="MTHSIELIAFPGAPNLPIFVAQDKGFFEAAGVRVNLTTTPNSAY
                     QAENLVEGQFQIAGTAFDNVVAYQEGQGAVALKRQPDLFAFMGATQIELAFVVAPDVK
                     NYADLKGKSLALDALSTGFAFVLYEMLARGGLERGDYEMVPVGATPQRWESVKAGTHA
                     GTLTIEPFTSIARNQGFGVLDTSSRLFDSYQGGSFAASRQWAAANPDAVKGFIKGYLG
                     GLGWTLHSGNRKEATDILLARMPEIKPPVAGAVMDSLLSPRSGLTPQGAILMDGVRTV
                     LDLRSRYGGGATLSDPGRYIDLSYYDQVVGK"
     gene            complement(4641..>5429)
                     /locus_tag="VHN20_15565"
     CDS             complement(4641..>5429)
                     /locus_tag="VHN20_15565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007752610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEX2727237.1"
                     /translation="CVSIIMGDTDIVSVGGGSHSGRSMRHAGTIITTASKQLIAKGKA
                     IAAAIFGTSPDKVDFREGRFRVAGTNYAFNFLDLAREAARHKLPDEIKDGLAVAAEHE
                     MHDPVFPNGCAVCEVEVDPHTGALTITRYAAVDDVGRCINPMIVHGQTHGAIAQGVGQ
                     AMWEEIRLDDAGQPLSGSLMDYGMPRFDNMPSFTVEIAEVLSPTNPLGIKSGSEGGTT
                     PALAVIVNAVVDALSEFGVRDIKMPLTPVTVWEAIQNARQPKAA"
BASE COUNT          827 a         1805 c         1836 g          961 t
ORIGIN      
        1 gcggcggcct catgacgctg tcgcaggcgc tgatcggcga gacggtgccg ccccgcgagc
       61 gcgggcgcta tcagggctat ctcgcggcca acgcggtctc ggcgagcacc ttcgggccgg
      121 tggtcggcgg ctttctgacc gagcatttcg gctgggaggc cgtgttcctg gtcaatgtcc
      181 cgctcggcgt gctcgcggtc gcgctgacct tccgcctgcg gccgctgccc gggtcgggcg
      241 gcgcgcgccg cttcgacatt ctgggcctgg tcctgttcgt gctgttcgtc gctcccgtcc
      301 tgctggcggt cgagcaggcg cagcgggtcc gctgggacac gcttccgggc gtgctcggcc
      361 tcgtcgccgt cggcgtggcg tcgttcgtgc tgctcatccg gcacgagaag cgcgccgcct
      421 cgccgctcct gccgatcggg cttttcaggc aggctgcgat ctggcgcagc gacgcaatgg
      481 cggcatttca cggcgcgacg ctggtgtcgc tgctcacctt catgccgctc tacctgcgca
      541 tcgtgagagg cgtctcggcc tccgaaaccg gtctcctgct gcttcccctc accgccggca
      601 tcggcttcgg tgcggttctg accggccaga tcatcacccg gaccggacgg acagcgatcc
      661 tgccctcggt cggcctgatc gtggtcgttc tcacgctggt tttcctcgcg gttcgcgcgc
      721 ctgcgctgag caacaccgcc atcgtcgtcc tgctggccgt caacgccctg ttcatgggca
      781 cggtgatggg cgtcgttcag atcaccgtgc agaccgtggc gggccgcgag cgcgtcggtg
      841 ccgccgccgg ctcggtgcag ttctcccgct cggtcggtgc ggcgttcggc acggcggccg
      901 tcggcggcgt cttgttcgcg accttggccg tcatggatcc cgaagcgccc cgcctgctcg
      961 aacggctcct ggagcacggg acgggcgtgt tcgcgtcgct gccggcggct cgccaggcgg
     1021 tcgtccggtc ggagatcgtg cttgcctttc aggcggcgtt cctgaccatt gccgccttcg
     1081 ccgccggcgc tctggtgctg gcctggtcga tcccggtgcg gcgcgtctga cggatcattg
     1141 agcgcgcgca tgcgcgccgc aacgcggggg ccttcgtgag catcgacttt ctgatcacct
     1201 cgctgatcgt cgtggcctcg cccggcaccg gcgttctcta cacgctcgcc gccgggcttt
     1261 cgcgcggccg ccgcgccagc gtcgtggccg cgttcggctg caccttcggc atcgtcccgc
     1321 acatggcggc ggccatcatg ggcgttgcgg cgctgctgca tgcaagcgcg ctcgccttcc
     1381 agatccacaa gtatctcggg gttgcgtatc tcctctacat ggcctggagc acgctgcgcg
     1441 agcatggccc gctcaggctg gagggagaga tcgggccgcg ttcggacatg cacgtgatca
     1501 cgacggccgt gctgatcaac atcctcaacc cgaagctgtc gatcttcttc tttgcgttcc
     1561 tgccgcaatt cgtgagcgcg ggcgagccgc atccgctgac gcgcatgctg gagctgagcg
     1621 ccgtgttcat gctgctcacc ttcgccgtct tcgtcgccta cgggctgtgc gccgcagccg
     1681 cgcgacggca cgtcatctca cgcccgcagg tgctcgtctg gctgcgccgc gcctttgccg
     1741 gcgcgttcgc cgcgctcggc gccaggcttg cgctggcgga gcggtgagcc ctctcccacc
     1801 ggaacgggaa gttacgcccc gtccacgagc atccggatct cgtcggccac ctgatcggga
     1861 atctcgagcg gcgtgaggtg gcgggcgccc gtcagcacgg tcagcgagga accgggaatg
     1921 ccggcctgca ggctcttcgc catgtcgagc ggcgtagcgt aatcctcctc gccgacgagg
     1981 atgcgcgtcg gcacattgat gcggggcagg gcggcgcgga cgtcacagac cccgagcatg
     2041 cggcacgtct cggcgtaggc cctgcggtcg ttggcgagga agacgttgac cgagcgccgc
     2101 acgacgtcag cgcggtcctc gcggaagcgg tcgccgaacc agcgcgtcgt ctggaactcg
     2161 acgaggccat cgaggccgct ggcggtggcg cggtcggcgc gttcgcccca ttgctggggc
     2221 gcctcggggc cgtaccacgc cgtcgtgtcg aagaggccga gggcctgcac gcgctcggga
     2281 taggccgcca cgaaggcgag ggcgacgcac ccgcccatcg agcaccccgc caccaccgcc
     2341 gactgccatc cgacatggtc catgagcgcg gcgagatcgc gcgcaaacag ctcggccgta
     2401 tacgggccag gcggcttgtc cgaggcgcca tgcccgcggc agtcgaaggt cagaatcgag
     2461 gcggcgtcag cgagacgctc ggcgaccgga tcccagaagc tgtggtccat agcgagcgaa
     2521 tggatcagca cgacgcgctt tgccccgccc tcgcgcaggc gataagcgat ctgtgtgccg
     2581 tcggcgacgc gcgccttgtc gagagcgggt ttcattgtcg tcctcttatg ttgtcgcgcg
     2641 cccgggccgg gcttgacccg gcaggagcgc ggtgctgacc atcagcgaaa gcttgcgcga
     2701 caaaatcagg gagcgacgag aatgtccatc attcgcctga tcatcacgac ggtgcccgcg
     2761 gaattcgccc gccaggcgga gaccaactgg aaggagaaat gcgcgccgat catgatccgc
     2821 cagccgggat gcctgtcgga aaagatgctg cgctgcgaaa cgacgccggg cgaatacatc
     2881 tcgtattccg aatgggagga cgaggcgagc atccagcgct atctgcagag cgaggatcat
     2941 cgcgaaatca agcgccacaa caccaacatc gaaggcgcca aggtggtcgt gaagcactac
     3001 tgcctggtgc gttgaacctg cctctcccga agggagacgt cgcgccggaa ggcgcgaccg
     3061 gatgaggggt gagacgcatc cggacagagc gccacccctc gttcgtcgcc tgagcctgct
     3121 ctcggacatg gtccgggggc gacaccttct cccacggaag tcggtttcac ccgagttccg
     3181 cattaaaatc atgaaagtcg ggcaggcccg actttcatgg cagaagggct cgacggatca
     3241 cttgtcgaag agtttgtcgg ctgcggtgat caggccgacg gtcgggttct tggcgcaata
     3301 ttcgccgagc ttctggccat ccgccttcat cttgtcgaaa tcgaccaccg gcggggaatc
     3361 ctcgtcgcgg taataagcat cgagccaggc cagcgtgtgg ctgatgttgc ttccggagct
     3421 ctcgaagaag tccttgcagg tgatggtcga aagatcgagc acctgcgacg tcgccggcac
     3481 cgccggcatg agaaacgcag cgaacaaggt agcgcacaga acccgcatga ccagttctcc
     3541 cgccgaggac gatagccgct ggggtaacgc tacgctttgt gaccggagcg ggcaagaaga
     3601 gcggcaccgg gcgcgcgtcg gcaacgcatg tcgatatcgg ggggcaagag ccgcctgaac
     3661 ggagcgacag ctctatttcc cgacgacctg gtcgtagtag ctgaggtcga tgtagcgccc
     3721 gggatcgctg agcgttgcgc cgccgccgta gcgcgagcgc aggtcgagca ccgtgcgcac
     3781 cccgtccatc aggatcgcgc cctgcggcgt caggccggag cgcggcgaca gaaggctgtc
     3841 catcacggcg cccgcaaccg gcggtttgat ctccggcatg cgggccagca ggatgtcggt
     3901 cgcttccttg cggttgccgg aatgcagcgt ccaaccgagg ccgccgagat agcccttgat
     3961 gaagccctta accgcatccg ggttggcggc ggcccattgc cggctcgccg cgaagctgcc
     4021 gccctggtag ctgtcgaaca gccgcgacga cgtgtcgagc acgccaaagc cctggttcct
     4081 ggcgatgctg gtgaagggct cgatcgtgag cgtacccgca tgcgtgcccg ctttcaccga
     4141 ctcccagcgc tgcggcgtcg cgccgaccgg aaccatctcg taatcgccac gctcgaggcc
     4201 gccgcgcgcg agcatctcgt agagcacgaa ggcgaagccg gtcgacagcg cgtcgagcgc
     4261 cagcgacttg cccttcaggt cggcgtagtt tttgacatcg ggcgcgacga cgaaggcgag
     4321 ctcgatctgc gtggcgccca tgaacgcgaa caggtccggc tgccgcttca gcgcgacggc
     4381 gccttgcccc tcctgatagg cgaccacgtt gtcgaatgcc gtcccggcga tctggaactg
     4441 gccctcgacg aggttctccg cctgataggc cgagttcggc gtagtcgtga gattgacgcg
     4501 cacgccggcg gcttcgaaga agcctttgtc ctgggcgacg aagatcggca ggttgggcgc
     4561 gcccgggaag gcgatcagct cgatggaatg ggtcaaggca cgtcttcctg tctatgcagc
     4621 gcgcggctgc ttgcttctat ttatgcagcc ttcggctgcc tggcattctg gatggcttcc
     4681 cacacggtga ccggcgtgag cggcatcttg atgtcgcgca ccccgaactc gctgagcgcg
     4741 tcgacgacgg cgttgacgat caccgccagg gccggcgtcg tgccgccttc gctgccggac
     4801 ttgatgccga gcggattggt cggggagagc acttcggcga tctcgacggt gaacgacggc
     4861 atgttgtcga agcgcggcat gccgtaatcc atcaatgatc cggacagcgg ctgaccggca
     4921 tcatcgaggc ggatctcttc ccacattgcc tggccgacac cctgcgcgat ggcgccgtgc
     4981 gtctggccgt gcacgatcat cgggttgatg cagcgcccga catcgtcgac ggcggcgtaa
     5041 cgagtgatcg tgagcgcgcc cgtgtgagga tcgacctcga cctcgcacac ggcgcagccg
     5101 ttcgggaaca ccgggtcgtg catctcgtgc tcggccgcca cggcgagccc gtccttgatc
     5161 tcgtccggca gcttgtgcct cgccgcctcg cgcgcgaggt caaggaagtt gaacgcgtaa
     5221 ttggtgccgg ccacgcggaa gcggccttcc cggaaatcaa ccttgtcggg gctcgtgccg
     5281 aatattgccg cagcgatggc cttgcctttg gcgatcagtt gcttcgaagc ggtggtgatg
     5341 atcgtgccgg catgacgcat ggagcggccc gaatgcgagc cgccaccgac gctgacgatg
     5401 tccgtatcgc ccatgatgat gctgacgca
//
LOCUS       DATAIQ010000945         1905 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_211080, whole genome shotgun sequence.
ACCESSION   DATAIQ010000945 DATAIQ010000000
VERSION     DATAIQ010000945.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1905)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1905)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1905
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_211080"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..653)
                     /locus_tag="VHN20_15570"
     CDS             complement(<1..653)
                     /locus_tag="VHN20_15570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727238.1"
                     /translation="MAKHPSSGKYAIVGLGVVAGPQPDNSERMILAEAARLAIEDAGL
                     TRKDIDGAIDLRRSGGGGDRASYSDAFTRVLGLNNNFYFTCGRGGALAGLGMSAAMSF
                     LDRGIANYVCIAGAVTDWSQSQVTRKKGFRGMAHAEKRGYWGKPVGDSRAVSHHSWMA
                     ARHMAVYGTTSRQLGHISVAQRSWACMNPEAKMYGRPITVEDHQNSPLLAEPYHLLDL
                     "
     gene            complement(677..1780)
                     /locus_tag="VHN20_15575"
     CDS             complement(677..1780)
                     /locus_tag="VHN20_15575"
                     /inference="COORDINATES: protein motif:HMM:NF024771.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enolase C-terminal domain-like protein"
                     /protein_id="HEX2727239.1"
                     /translation="MIVREFELRPCILRKDDPNWKFALGASPTTEGVVVRVASDTGCE
                     GFGYASATAHMGSTASTLKAELEFFRPVVLGSDAHALEAILAKLDRSLRGAPQAKAAI
                     DCALHDLLARSLGIPLNVLLGGQVRDRVPILRILAIKTPGEMAEQAQRLVDRGYRYLK
                     IKVHGEVDEDVARVAAIRRCVGDDVHLTIDANQSYTPKDAVTAINRMAEHRIDLVEQP
                     VPVADPEGLALVTRMVPVTVEADEAAGSLRDVYELVTRRAVDAVSLKIPKLGGLRNTI
                     AAARICEAGGVRYRLGAAVGSRLLGAHALHLACALPGVSYACELGEFDRLLDDPFEGI
                     EVEAGELRLTQEPGVGVRPRSAAAPAARAKELS"
BASE COUNT          293 a          651 c          658 g          303 t
ORIGIN      
        1 aggtcgagca gatgatatgg ctcggcaagg agcggcgagt tctgatggtc ctcgacggtg
       61 attggccgcc catacatctt ggcttcggga ttcatgcaag cccagctgcg ctgcgcgacc
      121 gagatgtggc cgagctgccg gctcgtggtg ccgtagaccg ccatgtgccg cgccgccatc
      181 cagctgtgat gactgaccgc gcgcgagtcg ccgaccggct tgccccagta gccgcgcttc
      241 tcggcatgcg ccatgccgcg aaaacccttc ttgcgcgtca cctgggactg ggaccagtcg
      301 gtgacggcgc cggcgatgca gacataattg gcaatgccgc ggtcgaggaa cgacatcgcc
      361 gccgacatgc cgagaccggc aagcgcgccg ccgcgtccgc acgtgaagta gaaattgttg
      421 ttgagaccga ggacgcgcgt gaacgcgtcg gagtaggagg cgcggtcgcc gccgccgccg
      481 gaccggcgca ggtcgatggc gccgtcgatg tccttgcgcg tgaggccggc gtcctcgata
      541 gcgaggcgcg ccgcttccgc caggatcatg cgctcggagt tatccggctg cggcccggcg
      601 acgacgccga ggcccacgat cgcgtatttg cccgatgagg gatgcttcgc cacgggtcat
      661 ttcctccagg tgatgatcac gacagctctt tggcgcgggc ggccggcgcg gcggcggacc
      721 gcgggcgcac gccgacgccg ggctcttgcg tcaggcgcag ctctcccgcc tcgacctcga
      781 tcccctcgaa cgggtcgtcg aggagccgat cgaactcgcc gagctcgcac gcatagctga
      841 cgcccggcag cgcgcaggcg agatgcagcg catgcgcgcc cagcaggcgg ctgccgaccg
      901 cggcgcccag ccggtagcgc acgccgccgg cttcgcagat gcgcgccgcc gcgatcgtgt
      961 tgcgcagtcc gccgagcttg gggatcttga ggctcacggc atccacggcg cgccgcgtca
     1021 ccagctcgta aacgtcgcgc agggagccgg ccgcctcgtc ggcttccacg gtcacgggca
     1081 ccatgcgcgt gaccagggcg agaccttccg ggtcggcgac gggcaccggc tgctcgacga
     1141 ggtcgatgcg atgctcagcc atgcggttga tcgccgtgac cgcatccttg ggcgtatatg
     1201 actggttggc atcgatggtg aggtggacat cgtcgccgac gcaccggcga atcgcggcga
     1261 cgcgggcgac gtcctcgtcg acttcgccgt gcaccttgat cttaaggtaa cgatagccgc
     1321 gatcgaccag gcgctgggcc tgctcggcca tctcgcccgg ggtcttgatc gccaggatgc
     1381 gcaggatggg gacgcggtcg cggacctggc cgccgagcag cacgttcagg gggatgccga
     1441 gcgaacgggc gagcaggtcg tgcaaggcgc aatcgatcgc cgctttcgcc tgcggcgccc
     1501 cgcgcaagct ccggtccagc ttcgccagga tggcttcgag ggcgtgcgca tcggatccga
     1561 gcacgaccgg ccggaagaac tcgagctcgg ccttcagcgt gctcgcggtc gagcccatat
     1621 gggcggtcgc ggaggcatag ccgaaacctt cgcagccggt gtcgctcgcg acccgcacca
     1681 cgacgccttc ggtcgtcggg ctggccccaa gggcaaattt ccagttggga tcatccttgc
     1741 gcaggatgca cgggcgaagc tcgaattcac gaacgatcaa ccgcctgctc tcctcttgcc
     1801 ctcaggcacc cggccgatgc cgcgtgcctg cttccgagag gtgagcgcat gcgagcgatc
     1861 cggcgtcgcc ggtcgcagcc ccctcggtca tctccccttg tccca
//
LOCUS       DATAIQ010000946         1564 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_256736, whole genome shotgun sequence.
ACCESSION   DATAIQ010000946 DATAIQ010000000
VERSION     DATAIQ010000946.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1564)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1564)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1564
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_256736"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..687
                     /locus_tag="VHN20_15580"
     CDS             <1..687
                     /locus_tag="VHN20_15580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX2727240.1"
                     /translation="QWEQSKNRAVGIYSGALGFGYNTTELAAKKLGEPKCWADLLDAK
                     LRDEVQVADPNSSGTAYTLLATVVQLMGEDKGFDYLKALHKNVNQYTKSGAAPAKATA
                     LGETAVGITFMHDMITMVVDGAPVKVVAPCEGTGYEIGSMSIIKGARNLDNAKKWYDW
                     ALTPAAQALGGETKQYQVPANKSTPVPPQAPKLQDIKLINFDFAKYGSSEERRRLLSK
                     WDKEVKSLPK"
     gene            701..>1564
                     /locus_tag="VHN20_15585"
     CDS             701..>1564
                     /locus_tag="VHN20_15585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727241.1"
                     /translation="MSSTAHPGPPLIRAAAADPASPASGRGVPRGAQIWLALGWLGYA
                     VLPWYLGAGPSFVEGSALVLGVTGEGWWLLPILAPLIAASRPLAGGLDRYDTGKWLTA
                     AGIAGLALILLQGFAIGLKGWNGVWLATVFGAPGPRQGGMGFGAALTALAFLILLCQG
                     LAMRGWCRGDAFVVSSVGVVVALIATFVFFPVTTVLTSALEDNAGAFAPGEFIAKFFD
                     RSIWGLDCLTSGVRCGVAWNTLFLATLVGVGTTALGLAFALIATRTGFRFKRALRVLT
                     VLPIITPPFVIG"
BASE COUNT          245 a          527 c          525 g          267 t
ORIGIN      
        1 caatgggagc agtcgaagaa ccgcgccgtt ggcatctatt cgggcgcgct cggcttcggc
       61 tacaacacca cggagctcgc cgcgaagaag cttggcgagc cgaaatgctg ggccgatctc
      121 ctcgacgcga agctcaggga cgaggtgcag gttgccgacc cgaactcgtc gggcaccgcc
      181 tacacgctgc tggcgactgt cgtccagctg atgggcgagg acaagggctt cgattacctc
      241 aaggcgttgc ataagaacgt caaccagtac accaagtcgg gcgccgcccc ggccaaggcc
      301 actgccctcg gcgagaccgc ggtcggcatc accttcatgc acgacatgat cacgatggtg
      361 gtcgacggcg cgcccgtgaa agtggtcgcc ccgtgcgaag gcaccggata cgagatcggc
      421 tcgatgtcga tcatcaaggg cgcccgcaac ctcgacaacg ccaagaaatg gtacgattgg
      481 gcgttgacgc cggcagcgca ggcgctgggc ggcgagacga agcagtacca ggtcccggcc
      541 aacaagagca cgccggtgcc gccgcaggcg ccgaagcttc aggacatcaa gctgatcaat
      601 ttcgacttcg ccaaatacgg ctcgtcggag gagcgccgcc gcctgctctc gaaatgggac
      661 aaggaggtca agagcctgcc gaagtgacgg gacggcaagg gtgagcagca cggcacatcc
      721 aggtcctcct ctcatccggg ccgctgccgc ggacccggcc tctcccgcga gcgggagagg
      781 cgttccacgg ggcgcgcaga tatggctggc gctgggctgg ctcggttacg cggtcctgcc
      841 ctggtatctc ggggccgggc cgtcctttgt cgagggaagc gcgctggtgc tcggggtcac
      901 cggcgaaggc tggtggcttc tgccgatcct ggcgcccctg atcgcggcga gtcggccact
      961 ggcgggcggt ctcgatcgtt acgacacagg caagtggcta accgccgccg gcatcgccgg
     1021 cctggcgctg atcctgcttc agggcttcgc gatcggcctc aagggctgga acggcgtgtg
     1081 gctagcgacg gtgttcgggg cgcccggtcc gcgccagggc gggatgggtt tcggtgcggc
     1141 gctcaccgcc ctcgccttcc tgatcctgct ctgccagggc ctcgccatgc gcggctggtg
     1201 ccgcggcgat gctttcgtgg tgtcgtcggt cggcgtcgtc gtggcgctga tcgccacgtt
     1261 cgtgttcttc cccgtcacca ccgtcctgac cagcgccctg gaagacaatg ccggcgcctt
     1321 cgcccccggt gaattcatcg cgaagttttt cgaccggtcg atctgggggc tcgattgcct
     1381 cacctccgga gtgcgctgcg gggtcgcctg gaacacgctg ttcctcgcca ccctggtcgg
     1441 cgtcggcacg acggccctcg gcctcgcctt cgcgctgatc gccacccgca cgggctttcg
     1501 cttcaagcgc gccctgcgcg tgctcaccgt cctaccgatc atcacgccgc cattcgtgat
     1561 cggc
//
LOCUS       DATAIQ010000947         2638 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_349011, whole genome shotgun sequence.
ACCESSION   DATAIQ010000947 DATAIQ010000000
VERSION     DATAIQ010000947.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2638)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2638)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2638
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_349011"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            274..627
                     /locus_tag="VHN20_15590"
     CDS             274..627
                     /locus_tag="VHN20_15590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727242.1"
                     /translation="MSDRGNPPASPPVLDADYGIVLRAYVQLPLFSRQDNECWVVPLK
                     KFATCELLLVESVPPTAGEFVLRVELFDWRSQSVVDSRPCEELEDAVAAFKAMLPVAE
                     AYAEIPCQAKWPETP"
     gene            820..1287
                     /locus_tag="VHN20_15595"
     CDS             820..1287
                     /locus_tag="VHN20_15595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008133876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727243.1"
                     /translation="MTTGTHPAAPHHLPFFVTPPGETDVLLVGTGIFLVAAVLGVGVL
                     YWRLHALPEHIAHRSHKLQLEIVAVLGLISLFTHMHIFWIIGLLLAMIDLPDFGTPMR
                     RMAGSLEKMAGLKPGQGDGALPDEAPDAPAQPHGEAAPAEGDKRPLTLAKTGS"
     gene            1291..2529
                     /locus_tag="VHN20_15600"
     CDS             1291..2529
                     /locus_tag="VHN20_15600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018387870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HEX2727244.1"
                     /translation="MLELLLCSLLTIFPDYLYRRYVQGKRLGREITFFSVWFELRWGI
                     TACLMLTVGLITVICYNHPATGNVTAFYRTIPIVPETIGRVAEVNVGFRDRIEQGKPL
                     FRLDSSKQEAALETARRKIAEVDAAMAVARADVLAAEGKIQEARSSYQQAVDELETKQ
                     ELYKRNPGNVAFRDLEKLQVAVEGRQGAITAATAAKQTAEMRISTLLPAEKASAEAAL
                     AQAEVDLDKTVIRAGVTGRVEQFVLRPGDLVNPMMRPAGVLIPEGAGRSMLQAGFGQI
                     EAQVMKPGMAAEATCVSKPWSVIPMVVTEVQDVIAAGQFRGGEQLIDAQQVTRPGTIL
                     VFLEPLYDGGLEGVTPGSSCVANAYSSNHELLASSKDLGSVRRFALHAVDATALVHAL
                     LLRIQALFLPIKTLVLSGGH"
BASE COUNT          469 a          853 c          868 g          448 t
ORIGIN      
        1 cgtcgacctg agccgcagac aggcctgaag ctttcaggag cggcgctagt tcgattcccg
       61 cggcgcgcgc ttccctgacc gcgaggcggg ccagcgcacc ggaagcggtg ggtaaaccgg
      121 aatgatgtgg ctcggaacgc atcccgtcgc gccatctcct gacaagttct tggcacgatc
      181 gagcaagacg cacaacgtga cggcggcgta tcccgcaggc gcttcggtac gccggttccg
      241 gcgtccaggc tctgaccgac gctggagatg agaatgagcg atcgcggcaa cccccccgcg
      301 tcaccgcctg tgctcgacgc cgattacggc atcgtcctgc gtgcctatgt gcagctgccg
      361 ctcttctccc gtcaggataa cgagtgttgg gtcgtgccgc tgaagaagtt cgcaacctgt
      421 gagctgctgc ttgtcgagag cgttccccca actgcgggtg agtttgtgct tcgggttgag
      481 ctgttcgact ggcggagcca gtcggtcgtc gacagcaggc cgtgcgaaga gctcgaggat
      541 gccgttgccg cgttcaaggc aatgctgccc gtggccgagg catatgcaga aattccgtgc
      601 caggcgaagt ggcctgagac tccctgagcc gcagcagttt cgtggcacgc tgggcttgcc
      661 gacgagtcgc cgcggagccc gattgacaaa tcgcaatgtt gtcgggaacc gcatggtgtc
      721 tcgtgtgcac ctgcgaagtc ggtgcgcctt cgcccgctgc gtaaccacgc gtgggcatcg
      781 gcgacgagcg cagcgtgatc ttggacaggg agcgccggcg tgacaacagg aactcaccca
      841 gcggcacctc atcatctgcc ctttttcgtc accccgccgg gagaaaccga cgtcctgttg
      901 gtcggaacgg gcatattcct cgtagccgcc gtgctcggcg tcggcgtcct gtactggcgc
      961 ttgcacgcgc tgcccgaaca catcgcccat aggtcgcaca agctgcagct cgagatcgtc
     1021 gccgtgctcg gcctgatctc gcttttcacg cacatgcaca ttttctggat catcggcctg
     1081 ttgctggcga tgatcgacct tcccgatttc ggcacaccga tgcgcagaat ggccggatcg
     1141 ctcgagaaga tggcaggcct caaacctggg caaggtgacg gggctctgcc agacgaagct
     1201 cctgacgccc cagcccagcc gcacggagaa gccgctcccg cagagggcga caagcggccg
     1261 ctcacgctgg cgaaaaccgg gagctgagcg atgctggaac tcctcctctg ctcgctgctg
     1321 acgatctttc ccgactatct ctaccgacgc tacgtacagg ggaagcggct tggcagggag
     1381 atcacgttct tctcggtgtg gttcgagctg aggtggggga tcacggcctg cctgatgctg
     1441 acggtcgggc tgatcacggt catttgctat aatcatccgg cgacgggcaa cgtcaccgct
     1501 ttctacagaa ccattcccat cgttcccgaa accatcggcc gcgtcgccga ggtcaatgtc
     1561 ggcttccgcg atcgcatcga gcagggcaag ccgctcttca ggctcgacag ctcgaaacaa
     1621 gaggcggcgc tcgaaactgc ccgccgcaag atcgccgagg tcgacgccgc gatggccgtc
     1681 gcccgcgccg acgtcctcgc ggcggaaggc aagatccagg aggccaggag cagctaccag
     1741 caggccgtcg atgagctgga gacgaagcag gagctctaca agcgcaatcc gggcaacgtc
     1801 gccttccgtg acctcgagaa gctgcaagtc gccgtcgagg gacggcaggg ggcgatcacg
     1861 gcggcgaccg ccgcaaagca gacggcggag atgcgcatct cgacgctgct gccggcggaa
     1921 aaggccagcg ccgaggcggc cctcgcgcag gccgaggtcg acctggacaa gacggtcatc
     1981 cgggcgggcg tcactgggcg tgtggaacag ttcgtcttgc gtccgggcga tctcgtcaac
     2041 ccgatgatgc ggccggcagg cgtgctgatc ccggaaggcg ccgggcgaag catgctgcag
     2101 gccgggttcg gccagatcga ggcgcaggtc atgaagcccg gaatggcagc cgaggcgacc
     2161 tgcgtgtcga agccctggag cgtcatcccg atggtggtca ccgaggtgca ggacgtcatc
     2221 gccgccggcc agttccgcgg cggcgagcag ctgatcgacg cgcaacaggt aacgcgcccg
     2281 ggaacgatct tggtcttcct ggagccgctc tacgacgggg gcctcgaggg cgtcaccccc
     2341 ggcagcagct gcgtcgccaa tgcctacagc agcaaccacg agctgctcgc ctcctcgaaa
     2401 gatctcggca gcgttcggcg tttcgccctt cacgcggttg atgccacggc gcttgtccac
     2461 gccctgctgc tgcgcatcca ggccctgttc ctgccgatca agacgctggt tctgagcggc
     2521 ggccactaac tggcgcaact cgggccaatg aaggaaggga gctcatcatg gatcctcgca
     2581 ggtccgtcgc cggcatccgc ggcgcaattg ccgcccgccg cgggtcggaa gggaggcg
//
LOCUS       DATAIQ010000948         1994 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_256885, whole genome shotgun sequence.
ACCESSION   DATAIQ010000948 DATAIQ010000000
VERSION     DATAIQ010000948.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1994)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1994)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1994
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_256885"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..813)
                     /locus_tag="VHN20_15605"
     CDS             complement(<1..813)
                     /locus_tag="VHN20_15605"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX2727245.1"
                     /translation="MSLAERLARPEILAMPPLDLEPTPNLADVIKLDANENPFPPLAG
                     GAFAANVNRYPESRPQRLRDVMAALYGVQPDQLLVARGGDDVIDLLCRTFLRGTEDAV
                     AVSTPTFTAYAHYAKLRGARIIELPLGPDFAFSADRIIDGLSDETNVKLAFVCAPNNP
                     TGTAVDAGEITALADRLPDTLILLDEAYLDFGDTPSLAAEAVTRPNLLVLKTLSKAWG
                     LAGARVGALIGPADTVALVSRALPHYPLPTLSIAAALDALQPSRRLVQQQRIA"
     gene            complement(810..>1994)
                     /gene="hisD"
                     /locus_tag="VHN20_15610"
     CDS             complement(810..>1994)
                     /gene="hisD"
                     /locus_tag="VHN20_15610"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: protein motif:HMM:TIGR00069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004399 - histidinol dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HEX2727246.1"
                     /translation="ADILAEVQSGGWDAVCRAAERIDGAAPQRLEVATLAAAARRDLP
                     AEAVAAMELAARNIRAFHQASRPADTKVETMPGLVVEKCWRPLDRAGLYVPGGATPLF
                     STLLMLALPAQAAGVEELVVVTPPTPSGLAPTIALAAELCGIEAIWTIGGAQAIAALA
                     FGAGNIPACPLICGPGNAWVAEAKLQASALPGGPAIDMPAGPSELMVIAEGTADPARV
                     AADLLSQAEHDASAQVLLVTTDEALAASTRQELARQLATLPRRDLAEQALEHGHMLIA
                     ADLAEAAAIANLYAPEHLCLAVEDSEALIPRIRNAGAIFAGHAAAETFGDYLAGSSHV
                     LPTDGAARAWSGITTTTFMKAVSVQRVSPEAAKALAAPAAALARLESLEAHARAAEAR
                     AA"
BASE COUNT          303 a          616 c          777 g          298 t
ORIGIN      
        1 ggcgatgcgc tgctgctgca ccaggcggcg cgagggctgc agggcatcga gggcggcagc
       61 aatactgagc gtcggcagcg gataatgggg cagggcacgg gagacgagcg cgactgtgtc
      121 cgccggtccg atcaatgcgc cgacccgggc tcccgcgagc ccccatgcct tggacagggt
      181 cttgaggacg aggaggttgg gacgcgtgac cgcttcggcc gcaagtgacg gggtgtcgcc
      241 gaaatcaaga taggcttcgt cgagcaggat gagcgtgtcc ggcaggcgat cggcaagggc
      301 cgtgatttcg ccagcgtcga ccgcagtgcc cgtgggattg ttgggcgcgc agacgaaggc
      361 gagcttcacg ttcgtctcat ctgaaaggcc gtcgatgatc cggtcggccg agaaggcgaa
      421 gtcggggccg agcgggagtt cgatgatccg cgcgccccgc agcttggcgt agtgcgcgta
      481 agcggtaaaa gtcggggtgc tgaccgcaac cgcatcctcc gtcccgcgta ggaaggtgcg
      541 gcagagaagg tcgatgacat cgtcgccgcc gcgcgcgacc agcagctggt cgggctgcac
      601 gccgtagagc gccgccatga cgtcacgcag gcgctggggc cgggactcgg ggtatcggtt
      661 gacgttggcc gcgaaggcac cgccggcgag cggcgggaag gggttctcgt tcgcgtcgag
      721 cttgatcacg tcggccaggt tcggcgtcgg ctcgagatcg agtggcggca tggccaggat
      781 ctccggccgg gcaaggcgct cggcgaggct catgcggccc tcgcttccgc cgcgcgggcg
      841 tgggcttcga ggctttccag gcgggcaagt gcggcggccg gagcggcgag cgccttggcg
      901 gcttctgggg agacgcgctg gacgctgacc gccttcatga aggtagtcgt ggtgatcccg
      961 ctccaggcgc gagcagcgcc gtcggtcggc aggacgtggg aagagccggc gagatagtcc
     1021 ccaaaggtct cggcggcggc gtggccggcg aagatcgcgc cggcgttgcg gatgcgtggg
     1081 atcagcgctt cggagtcctc aactgctagg caaaggtgct cgggcgcgta gaggttggcg
     1141 atcgcggcgg cttcggccag gtccgcggcg atcagcatgt ggccatgctc cagggcctgc
     1201 tcggccaagt cgcgccgggg cagggttgcg agctggcggg cgagctcctg tcgggtcgaa
     1261 gccgctagtg cttcgtcagt ggtgacgagc agcacctggg cgctggcgtc atgctcggcc
     1321 tggctgagga ggtcggcagc gacgcgcgca gggtctgcgg tgccctcagc aatgaccatc
     1381 agctcagatg ggcccgccgg catatcgatc gcggggccac cgggcagcgc ggaggcctgc
     1441 agcttggcct cggcaaccca ggcgttgccc gggccgcaaa tcagcgggca ggctgggata
     1501 ttgccggcac cgaaggcgag cgccgcaatc gcttgggcgc cgccgatggt ccagatcgcc
     1561 tcaatgccgc agagctcggc cgcgagggcg atggtgggtg ctaagccact cggcgtcggc
     1621 ggggtgacga ctaccagttc ctcgacgccg gcggcttgcg ctggcaacgc cagcatcagc
     1681 agggtcgaga aaagcggggt cgcgccgccg ggtacgtaga ggccggcacg atcgaggggg
     1741 cgccagcatt tctcgaccac caggccgggc atggtctcga ccttggtgtc cgcgggccgg
     1801 ctcgcctggt ggaaggcgcg gatgttgcgg gcggcgagct ccatcgccgc caccgcttcc
     1861 gccggcaggt cacggcgagc ggctgcggcg agggtcgcga cttccaaccg ctggggagcg
     1921 gcgccgtcga tccgctcggc cgctctgcaa acggcgtccc agccgccaga ctgcacttcc
     1981 gccaatatat cggc
//
LOCUS       DATAIQ010000949         3405 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_349263, whole genome shotgun sequence.
ACCESSION   DATAIQ010000949 DATAIQ010000000
VERSION     DATAIQ010000949.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3405)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3405)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3405
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_349263"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1574)
                     /locus_tag="VHN20_15615"
     CDS             complement(<1..1574)
                     /locus_tag="VHN20_15615"
                     /inference="COORDINATES: protein motif:HMM:NF036723.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX2727247.1"
                     /translation="MLDRYGYATHEVLNQPPPLSDYDAYATDPTLRAVVGAFGAGWAE
                     ARLAHAGAAVGSAHVQGLARQANRFAPELRTHDRFGNRVDEIEFHPAWHELMALCMSQ
                     ETHSLAWTDPRPGAQVARGALAYLWNQGESGIMCPILMTYASLPTLRADPAMAREWEA
                     KALSTRYDPRPIPAAAKTGITVGMAMTEKQGGSDLRQTQSYAERDGELWRLVGHKWFF
                     SVPHSDVFIALARTAGGVSCFLVPGWLPDGSRNRIAVQRLKDKAGNRSNASSEIELHG
                     AYASLIGEEGRGIRHAVGMGHLTRLECAISSAALMRQAVAQAAHHAQYRRAFQKTLIN
                     QPIMANVVADLHLETTAAAWLAFRVAAAFDSQADASERLLARIGAPIAKYWICKRVVP
                     VVAEALECHGGNGFIEDHVMARLYREAPLNGIWEGAGNIMCLDVLRSMQREPGCVQVL
                     LDEIGQGRGHDGRLDAAIDRLASDLADPARHEGQARRLVERIALALSASLLVRHFPGV
                     LADAFVASRLEAGWTGA"
     gene            1674..3110
                     /locus_tag="VHN20_15620"
     CDS             1674..3110
                     /locus_tag="VHN20_15620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019905186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="circularly permuted type 2 ATP-grasp protein"
                     /protein_id="HEX2727248.1"
                     /translation="MAQVAFDEMTGGLNGDPSSGVRAPYEQLQRWLEITPPEIFDARR
                     RQAELFFRRIGITFAVYGDNESVERLIPFDIIPRVLTKPEWTLLERGLKQRVTAINAF
                     LRDIYGPQDCIRAKIVPEDLVYRNPNYRLEMMRMDVPHGVYVHIAGIDVVRVDEDTFY
                     VLEDNARTPSGVSYMLDNREAMMRLFPELFVRHRVAPVENYPDALLASLRSVAPKAAP
                     HDAVVALLTPGRFNSAFYEHSFLADKLGIELVEASDLLVKDDVVFMRTTEGPRRVDVI
                     YRRIDDDFLDPLVFRPDSALGVPGLMSAYQAGNVTLCNAVGTGVADDKAVYSYMPAIV
                     RFFTGEEPILKNVPTWRCREPDALTYVLEHLPELVVKEVSGSGGYGMLIGPHASKNEL
                     DAFARKLRADPEGFIAQPTLALSTCPTFVASGVAPRHVDLRPFVLTGAKEIQVVPGGL
                     TRVALKEGSLVVNSSQGGGTKDTWVLDG"
     gene            3173..>3405
                     /locus_tag="VHN20_15625"
     CDS             3173..>3405
                     /locus_tag="VHN20_15625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010684114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-E domain-containing protein"
                     /protein_id="HEX2727249.1"
                     /translation="MLSRTADNLFWLSRYTERADLVARILDATMRLASLPSSYGGERN
                     EWQSALAVAGNLDLFSQHYEVASEDTVREFLAF"
BASE COUNT          548 a         1151 c         1114 g          592 t
ORIGIN      
        1 gcaccggtcc aacccgcttc gaggcggctc gccacgaagg cgtcggcgag cacgccgggg
       61 aaatgtcgga cgagaaggct cgcgctcaat gcgagggcga tgcgttcgac cagccgccgc
      121 gcctggcctt cgtggcgcgc cggatcggcc agatcggacg cgaggcgatc gatggcggca
      181 tcgagccggc cgtcgtgtcc cctgccctgt ccgatctcgt cgaggagcac ttgcacgcaa
      241 cccggctcgc gttgcatcga gcgcagcacg tcgaggcaca tgatgttgcc ggcgccttcc
      301 cagatgccgt tgagcggcgc ctcgcgatag agccgcgcca tgacgtggtc ctcgatgaag
      361 ccgttgccgc cgtggcactc gagcgcctcg gcgaccaccg gcacgacgcg cttgcagatc
      421 cagtatttgg caatcggcgc gccgatgcgc gccagcagcc gctcgctggc gtccgcttgt
      481 gaatcgaaag ccgcggcgac gcggaacgcg agccaggccg ccgcagtggt ttcgagatgc
      541 agatcggcga cgacgttcgc catgatcggc tggttgatca gcgttttctg gaacgcgcgt
      601 cggtattgcg cgtgatgcgc cgcctgcgcc acggcctgcc gcatcagcgc cgcggagctg
      661 atcgcgcatt ccagccgggt caggtggccc atgccgaccg catgacggat gccgcgtccc
      721 tcttcgccga tcaggctcgc gtaggcgccg tgcaattcaa tctctgacga ggcgttcgat
      781 ctgttgccgg ccttgtcctt gagccgctgc accgcgatgc ggttgcggct gccgtcgggc
      841 agccagcctg gcacaagaaa gcacgacact ccgccagcgg tgcgcgcgag cgcgatgaac
      901 acgtcggaat ggggcacgga gaagaaccac ttgtgcccga ccagccgcca cagctcgccg
      961 tcgcgttcgg catagctttg cgtctgccgc aggtcggagc cgccctgctt ctccgtcatc
     1021 gccatcccga cggtgatccc ggttttcgcc gcagccggga tcggccgcgg gtcatagcgg
     1081 gtcgagaggg ccttggcctc ccattcccgc gccatcgccg ggtccgcgcg caacgttgga
     1141 agcgaagcgt aggtcatgag gatcgggcac atgatgccgc tctcgccctg gttccacaga
     1201 taggcgagcg cgccgcgtgc cacctgggcg ccggggcgcg gatccgtcca ggcgagcgaa
     1261 tgggtctcct ggctcatgca gagcgccatc agctcgtgcc aggcagggtg aaactcgatc
     1321 tcatcgacgc ggttgccgaa gcggtcgtgg gtccgcagct cgggcgcaaa gcggttcgcc
     1381 tggcgcgcca gcccctgcac atgggcgctg ccgaccgcgg ccccggcatg ggccagtctg
     1441 gcttcggccc agcccgcacc aaaggcgccg acgaccgcgc gcaaggtcgg atcggtcgcg
     1501 taggcgtcgt agtccgatag cggcggcggc tggttcagga cctcgtgggt cgcatagccg
     1561 taacggtcga gcatcagcgc ttctctcgca tccttgcggg gccgaggaat gttgcttccc
     1621 ctggaacgca tcttgcgtct aggcttgtag ggcaggcaag gttgaggaac agtatggcgc
     1681 aagtggcatt cgacgagatg acgggcggcc tgaatggcga tccctcatcg ggcgttcggg
     1741 ccccttacga gcagctgcag cgctggctcg agatcacgcc gccggaaatc ttcgatgccc
     1801 gccgcaggca ggccgagctg ttcttccggc gcatcggcat taccttcgcg gtttacggcg
     1861 acaatgaatc cgtcgagcgc ctgataccct tcgacatcat cccgcgggtg ctcaccaagc
     1921 cggaatggac gctgctcgaa cgcggcctca agcagcgcgt caccgccatc aacgctttcc
     1981 tgcgcgacat ttatggcccg caagattgca tcagggccaa gatcgttccc gaggatctcg
     2041 tctaccgcaa ccccaattac cgcctcgaga tgatgcgaat ggacgtgccg cacggggtct
     2101 atgtccacat cgccggcatc gatgtcgtca gggtcgacga ggacacgttc tatgtcctcg
     2161 aagacaacgc gcgcacgccg tccggcgtct cgtatatgct cgacaatcgc gaagcgatga
     2221 tgcggctgtt tcccgagctg ttcgtgcgcc accgcgtcgc gccggtggag aattacccgg
     2281 acgccctgct cgcgtctttg cgttccgtcg ccccgaaggc agcgccgcac gacgctgtcg
     2341 tcgccctgct tacgccgggc cgtttcaact cggccttcta cgagcactcg ttcctggccg
     2401 acaagctcgg gatcgagctg gtcgaagcgt ctgacctgct cgtcaaggac gacgtcgtct
     2461 tcatgcgaac caccgagggg ccgcgccgcg tcgacgtgat ctaccgacgc atcgacgacg
     2521 acttcctcga tcccctcgtc ttcaggccgg attcggccct cggcgtgccg gggctgatga
     2581 gcgcctatca ggccggcaac gtgactctgt gcaacgctgt cgggaccggc gtcgcggacg
     2641 acaaggcggt ctacagctac atgccggcga tcgtgcgctt cttcacgggc gaggagccga
     2701 tcctcaagaa cgtgcccacc tggcgctgcc gcgagcccga tgcgctgaca tatgtcctcg
     2761 agcacctgcc cgagctggtc gtcaaggagg tgagcgggtc cggcggctac ggcatgctga
     2821 tcggcccgca tgccagcaag aacgagctcg acgccttcgc gcgcaaactc agagcggatc
     2881 cggaaggctt catcgcgcag ccgacgctcg cgctgtcgac ctgcccgacc ttcgtcgcat
     2941 ccggcgtcgc ccctcggcac gtcgacctgc ggccgttcgt gctgaccggc gccaaggaga
     3001 tccaggtcgt tccgggcgga ttgacccgcg tggccctcaa ggaaggctcg ctggtggtca
     3061 attcgagcca gggcggcggc accaaggaca cgtgggtgtt ggatggctga cgcgtgcatc
     3121 cccccaagcc gttctttggc ggcagtgatc aacagcaacc cgcgggtgcc cgatgctgtc
     3181 ccgtaccgcc gataatctct tctggctgtc ccgctacacc gagagggccg atctcgtggc
     3241 gcgcatcctc gacgccacga tgcggctcgc gtcgctgcct tcgagctatg gcggcgaacg
     3301 caacgagtgg cagagcgcgc ttgccgtggc gggcaatctc gacctcttct cgcaacatta
     3361 cgaggtggcg agcgaggaca cggttcgcga gttcctcgcg ttcag
//
LOCUS       DATAIQ010000950         2966 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_211614, whole genome shotgun sequence.
ACCESSION   DATAIQ010000950 DATAIQ010000000
VERSION     DATAIQ010000950.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2966)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2966)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2966
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_211614"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(39..1760)
                     /locus_tag="VHN20_15630"
     CDS             complement(39..1760)
                     /locus_tag="VHN20_15630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEX2727250.1"
                     /translation="MNSSMPAAAADATAGDARKPWLKSYPSGVPATIDEAQLGTLADL
                     FRDSVARHGARPAAESFGKRQTYAELGAAADAVASWLQSKGLKKGDRVAIMLPNVMAY
                     PAILFGVLIGGFTVVNVNPLYTARELSHQLQDSGARILFVLENFGHTVEDALAGLKLD
                     EVVVVAPGDLLGIKGMIVNLVSRRVKKAVKPFRLPKSVTFKSVLDAGSASPPTAVAIG
                     PDDVAFLQYTGGTTGVAKGAMLLHRNVAANVEQFYLWMRGYIGDRPDHVMVTALPLYH
                     IFALTLCGLLMARIGACMLLIANPRDIPGFVKTLKSRPFTLMAGLNTLYNALANNPGL
                     KEVDFSQVRLCIAGGMATQDAVARRWKEVTGQRICEGYGLSETSPGVTANRLDHPEFT
                     GTVGYPLPSTDVSIRSADDGGALPIGEAGELCVKGPQVMKGYWKRPDETAKVTTSDGY
                     FRTGDIAVLLADGQVKLVDRIKDMVLVSGFNVYPNEVEEVLVTHPGVLEAAVIGVPDE
                     HSGEAVAAYIVRKDPNVTEADIRAFCKDNLTGYKIPRRISFRDSLPKTPVGKVLRRAL
                     RDEVPGT"
     gene            1989..2339
                     /locus_tag="VHN20_15635"
     CDS             1989..2339
                     /locus_tag="VHN20_15635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020092941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX2727251.1"
                     /translation="MALVIEDEPEVRSLAATIIEETDLDVVEMESAEEALAYLRQNAG
                     DVAMIFADVRLPGRIDGVDVARTAAQSWPWIKVVLTSGAMDYALDELPDTTTFMPKPW
                     RALDVLVQADLATH"
     gene            complement(2683..>2966)
                     /locus_tag="VHN20_15640"
     CDS             complement(2683..>2966)
                     /locus_tag="VHN20_15640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HEX2727252.1"
                     /translation="VEITIPSEALSKATGLVSARRGQILGYDSRPGWQGWDVLNAHIP
                     ESEIGDLIVELRSATAGVGTFSTHFDHMAELTGRPAETVLAAAGARNGH"
BASE COUNT          496 a          977 c          971 g          522 t
ORIGIN      
        1 gggcccggct tttttgtgct ccgtcatcgg gggcacgctc acgtccccgg cacctcgtcg
       61 cggagcgcgc ggcgcagcac cttgccgacc ggcgtcttgg gcaggctgtc gcggaagctg
      121 atgcggcgcg ggatcttgta gccggtcagg ttgtccttgc agaaggcgcg gatgtccgcc
      181 tccgtcacgt tcgggtcctt cctgacgatg taggcggcga cggcctcgcc ggaatgctcg
      241 tcgggcacgc cgatcacggc ggcctcgagc acgccgggat gcgtgacgag cacttcctcg
      301 acctcgttcg gataaacgtt gaacccggac accaggacca tgtccttgat gcggtcgacg
      361 agcttgacct ggccgtcggc cagcagcacg gcgatatcgc cggtgcggaa atagccgtcg
      421 cttgtcgtca ccttcgcggt ctcgtcaggc cgcttccagt agcccttcat cacctgcggg
      481 cctttcacgc agagttcgcc cgcttcgccg atcggcagcg ccccgccgtc gtcggcggaa
      541 cggatcgaca cgtcggtcga cggcagcgga tagccgaccg tgcctgtgaa ctcggggtga
      601 tcgagccggt tggccgtgac gccgggcgac gtttccgaca ggccgtagcc ctcgcagatg
      661 cgctggccgg tcacttcctt ccagcgcctg gcgaccgcgt cctgggtggc catgccgccg
      721 gcgatgcaca ggcggacctg cgagaagtcg acttccttca ggcccgggtt gttggcaagc
      781 gcattgtaga gcgtgttgag tcccgccatg agcgtgaacg ggcgagactt gagcgttttc
      841 acgaaacccg ggatgtcgcg cggattggcg atcagcagca tgcatgcgcc gatccgggcc
      901 atcagcaggc cgcacagcgt cagagcgaag atgtggtaga gcggcagcgc cgtgaccatc
      961 acatggtcgg ggcggtcgcc gatatagccg cgcatccaca ggtaaaattg ctcgacattg
     1021 gccgcaacgt tgcgatgcag gagcatggcc cccttggcga cgcccgtggt gccgccggta
     1081 tattgcagga acgcgacgtc gtccggcccg atcgccacgg ccgtcggcgg cgacgcggag
     1141 cccgcatcga gcacgctctt gaaggttacg gatttcggca gccggaaagg cttgaccgct
     1201 ttcttgacgc gccgggacac gaggttgacg atcatcccct tgatcccgag gagatcaccc
     1261 ggcgcgacca ccaccacctc gtcgagcttg aggccggcga gcgcgtcctc gacggtgtgg
     1321 ccgaaattct cgagcacgaa caggatgcgg gcgcccgagt cctgcagctg gtgcgagagc
     1381 tcgcgcgccg tgtagagcgg gttgacgttc acaaccgtga agccgccgat caggaccccg
     1441 aacaggatgg ccgggtaagc catcacgttc ggcagcatga tcgcgacgcg gtcgcccttc
     1501 ttgagaccct tgctctgcag ccacgacgcg accgcatcgg cagcagcgcc gagctccgcg
     1561 taagtctgcc gcttgccgaa gctttccgcc gccggccggg cgccgtggcg tgcgacgctg
     1621 tcgcggaaca gatcggccag cgtgccgagt tgcgcttcgt cgatcgtggc gggaaccccg
     1681 gacggatacg atttcagcca gggcttgcgc gcgtcgcccg cggtcgcgtc ggccgcagct
     1741 gcaggcatcg agctgttcat cctcccctcc gggttgtcgc gtgttgtcga cgatccacgc
     1801 taacttgact atgttgacaa actgccttcg gatgcgcgcc ttgtcgatgg ccagcgtttt
     1861 ccggagtgga tcacggattt tttacggcct agctgaaacc ttcggctgcc tgcgcccgtt
     1921 ccgccaaggc tgcctggcaa aggggtgacg tcatggctta tgcgggacag aagtccaaaa
     1981 caccgtccgt ggctctcgtg atcgaagacg agccggaggt tcggagcctt gcagcgacca
     2041 tcatcgagga gacggatctc gacgtggtgg agatggaaag cgccgaggag gcgctcgcct
     2101 acctgcgtca gaatgccgga gatgtcgcca tgatcttcgc cgacgtgcgg ctgcccggcc
     2161 gcatcgacgg cgtcgacgtg gcccgcacgg ccgcccagtc ctggccctgg atcaaggtcg
     2221 tgctgacttc cggcgccatg gattacgcgc tcgacgagtt gcccgacacg accaccttca
     2281 tgccgaagcc ctggcgcgca ctcgacgtgc tcgtccaggc cgatctcgcc acgcattaga
     2341 gcacgatccg gcaacgacgg gtattacgtg accgcttcag atagattgaa gcgatacgct
     2401 ctagtattgt catttccgca ggcggcgccg ctccctagct gtcatcaccg gccttgtgcc
     2461 ggtgatctcg atcggaaagg cgccgcccat cctgtcggga tggccgggac aagcccggcc
     2521 atgacaagaa cgcgctgaag atcacatgac gagcgccgcg catccatgaa tcgagatggc
     2581 cgtacccgga tcagcgcttc cgctgtccgg gcacaagggc acaccaagcc cggccatgac
     2641 aacgtcacgt gatcggcaaa gtggtcatca cattgccgac cgctagtgcc cgttgcgcgc
     2701 accggccgcc gccaggaccg tttcggcggg acggccggtc agctcggcca tgtggtcgaa
     2761 atgcgtcgag aacgtcccga cgcccgcggt cgccgagcgc aactcgacga tcaggtcgcc
     2821 gatctccgat tccgggatgt gggcgttgag cacgtcccag ccctgccagc caggacggct
     2881 gtcgtagccg aggatctgtc cgcgccgggc cgacacgagc cccgtcgcct tggacagcgc
     2941 ctccgatggg atcgtgatct cgaccg
//
LOCUS       DATAIQ010000951         2918 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_349528, whole genome shotgun sequence.
ACCESSION   DATAIQ010000951 DATAIQ010000000
VERSION     DATAIQ010000951.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2918)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2918)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2918
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_349528"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1308
                     /locus_tag="VHN20_15645"
     CDS             <1..1308
                     /locus_tag="VHN20_15645"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain fatty acid--CoA ligase"
                     /protein_id="HEX2727253.1"
                     /translation="VPYFPAVYYGVLNAGGVVVPMNVLLKGREVGFYLSDPPVKVLFA
                     WHDFMDAAQAGAKEAGGVDVVSVKPGEIEGVIFAHEPDPDVAERAGDDTAVILYTSGT
                     TGKPKGAELTHDNLRRNVDIAVGLFDMGVGDVIFGGLPLFHSFGQTCTMNAAIACGAT
                     VTLLPRFDAGKALEILQRDACTVFEGVPTMYGALLNHPERKDFDVSKLRVCASGGASL
                     PVEILRGFEECFGCKVLEGYGLSETSPIASFNHPDRERKPGSIGTPIKGCEMKLVDDD
                     RNEVAKGEIGEILIKGTNVMKGYLNHPDATAEAIKDGWFATGDMAKVDEDGYFFIVDR
                     KKELIIRGGYNVYPREIEEVLYEHAAVREAAVVGVPHDELGEEVGAAIALKDGAEVEI
                     EELRAFVKEQVAAYKYPRHIWFVDELPKGPTGKILKREISPPA"
     gene            complement(1383..2615)
                     /locus_tag="VHN20_15650"
     CDS             complement(1383..2615)
                     /locus_tag="VHN20_15650"
                     /inference="COORDINATES: protein motif:HMM:NF033542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HEX2727254.1"
                     /translation="MDVIVERVGALDVHKSSVMACVRVPAERGRREEHIAQFSTTVQG
                     LLALRDWLAAHCVTQVAMEATGVYWKPVWAILEDDFELMLVNARHVKQVPGRKTDVSD
                     AAWLCHLAEAGLLRASLVPPKPMRDLRDLTRYRKAQIRDRQREANRLHKVMQDTNIKL
                     DSVASDLLGKSGRAMLDALVAGTTDPEVLADLARGQLRKKLPALRQALEGRFGAKHAL
                     IVGQILAHIDFLDEAIDRLSAAIEEQLGPFGQAQVDLLCTIPGIQRRAAEVIIAETGA
                     DMTKFQTAGHLASWAGVCPGNNESAGKRRSGRTTKGSKWLRQTLTECAQAASRTKDTY
                     LAAHYARTRTRRGANRATTAVAHSILTACWHMLQTGETYNDPGGDYYQRRDPERVTKR
                     LIKQLERLGHTVTLQEAA"
BASE COUNT          470 a          932 c         1025 g          491 t
ORIGIN      
        1 gtcccctact tcccggcggt gtactacggc gtcctgaacg ccggcggcgt ggtcgtgccg
       61 atgaacgtgc tgctcaaggg gcgcgaggtc ggcttctacc tctccgatcc gccggtgaag
      121 gtgctcttcg cctggcacga cttcatggat gccgcgcagg ccggagccaa ggaggccggc
      181 ggcgtcgacg tcgtctccgt caagccgggc gagatcgagg gcgtgatctt cgcccacgag
      241 cccgatcccg acgtcgccga gcgcgccggc gacgacacgg cggtgatcct ctacacgtcg
      301 ggcacgaccg gcaagccgaa gggcgccgag ctgacgcacg acaacctgcg ccgcaacgtc
      361 gacatcgcgg tcggcctgtt cgacatgggc gtcggcgacg tcatcttcgg cggcctgccg
      421 ctgtttcact ccttcggcca gacctgcacg atgaacgccg cgatcgcctg cggcgcgacg
      481 gtgacgctgc tgccgcgctt cgatgccggc aaggcgctgg agatcctcca gcgcgacgcg
      541 tgcacggtct tcgagggcgt gccgacgatg tacggcgcgc tgctgaacca ccccgagcgc
      601 aaggatttcg acgtctcgaa gctgcgcgtc tgcgcctccg gcggagcgtc gctgcccgtc
      661 gagatcctgc gcggcttcga ggagtgcttc ggctgcaagg tgctcgaggg ctacggcctg
      721 agcgagacgt cgccgatcgc gtcgttcaac caccccgatc gcgagcgcaa gcctggctcg
      781 atcggcacgc cgatcaaggg ctgtgagatg aagctcgtcg acgacgaccg caacgaggtc
      841 gcgaaaggcg agatcggcga gatcctcatc aagggcacga acgtcatgaa gggctacctc
      901 aaccatccgg acgcgaccgc cgaggcgatc aaggacggct ggttcgccac gggcgacatg
      961 gcgaaggtcg acgaggacgg ctacttcttc atcgtcgatc gcaagaagga gctcatcatc
     1021 cgcggcggct acaacgtcta cccgcgcgag atcgaagagg tcttgtatga gcacgccgcg
     1081 gtgcgcgagg cggcggtcgt cggcgtgccg catgacgaac tcggcgagga ggtcggcgcg
     1141 gcgatcgcgc tgaaggacgg cgccgaggtc gagatcgagg agctgcgcgc gttcgtcaag
     1201 gagcaggtcg cggcgtacaa gtacccgcgc cacatctggt tcgtcgacga gctgcccaag
     1261 gggccgaccg gcaagatcct caagcgggag atctccccgc cggcgtagac atgcgctttc
     1321 gcgcgtcgca tgggcagcga tcgcgtggtc gaactgcatc tgaagagaaa tccccgtcgt
     1381 gtttaggcag cctcctgcag ggtgacggtg tgtccgaggc gctcgagctg cttgatgagg
     1441 cgtttggtga cgcgttcggg gtcgcggcgt tggtagtagt cgccgccggg gtcgttgtag
     1501 gtctctccgg tttgcagcat gtgccagcag gcggtcagga tcgagtgtgc gacggcggtc
     1561 gtcgcgcggt tggcgccgcg gcgtgtgcgg gtccgggcgt agtgcgcggc gaggtaggtg
     1621 tccttggttc ggctggcggc ctgcgcgcac tcggtcagtg tttggcgcag ccatttggag
     1681 cctttggtgg tgcgtccgct gcggcgtttg ccggccgatt cgttgttgcc gggacagacg
     1741 ccggcccatg aggcgaggtg cccggcggtc tgaaacttgg tcatgtcagc gccggtctcg
     1801 gcgatgatga cttcggcggc gcggcgttgg atgcccggga tcgtgcacag caggtcgacc
     1861 tgggcttggc cgaaagggcc gagttgttcc tcgatcgcag cggagagccg gtcgatcgcc
     1921 tcgtcgagaa aatcgatgtg cgcgaggatc tgccccacga tcagggcgtg cttggcgcca
     1981 aagcggcctt ccaatgcctg cctgagtgcg ggcagcttct tgcgtagctg gccgcgcgcg
     2041 aggtcggcga ggacctcggg gtcggtggtg cccgcgacga gcgcgtcgag catcgcgcgg
     2101 cccgacttgc ccagcaggtc tgaggccacc gagtcgagct tgatgttggt gtcctgcatc
     2161 accttgtgca gccggttggc ctcgcgctgg cggtcacgga tctgcgcctt gcgatagcgc
     2221 gtcaggtcac gcagatcacg catcggcttg ggcggcacca ggctcgcacg cagcagcccg
     2281 gcttcggcga ggtgacacag ccacgccgcg tcggacacgt cggtcttgcg accggggacc
     2341 tgtttgacgt gacgcgcgtt gacgagcatg agctcgaagt cgtcttcgag gatcgcccac
     2401 accggcttcc agtacacacc ggtcgcctcc atcgcgacct gcgtcacgca gtgcgccgcc
     2461 agccagtcac gcaacgccag cagcccctgc accgtcgttg agaactgcgc gatgtgctcc
     2521 tcgcgccggc cgcgctcagc cgggacgcgc acgcacgcca tcacgcttga cttgtggacg
     2581 tccagcgcgc cgacacgctc gacgatgaca tccatccaga cctccaatca gtcgagatcg
     2641 agaacgtcgc tcgccgggaa cctcgactgc agtcgagtct gaagggcggg ctcacaggca
     2701 ccagtcccgg gttccgggca aggctcccac gccagacttt gaacgggctc acaaacacca
     2761 agatgcaagg cggcgcgatg acaagcgacc cgtgcagcat cgctgatttc atccgccccg
     2821 ggtggccgcc aggccatgaa gactttgagg gagtccggga gtgtgggcgt cgacgtttcg
     2881 gccagggccg gcggaggggt cctcgaagaa acgtccca
//
LOCUS       DATAIQ010000952         2415 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_69867, whole genome shotgun sequence.
ACCESSION   DATAIQ010000952 DATAIQ010000000
VERSION     DATAIQ010000952.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2415)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2415)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2415
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_69867"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..701)
                     /locus_tag="VHN20_15655"
     CDS             complement(<1..701)
                     /locus_tag="VHN20_15655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018263551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727255.1"
                     /translation="MTADLRGSADQVEGAVPPDVPAFAANARAVTNWRAEAVRDLDPL
                     PLSALAVLLRVERPVVTRCVKLNNYWCIKQARWSGEIGADEEGHVGFATAEHGADAAV
                     KLLRRYYLELDRKSALAIVRRWAPAECRLPAASGPPAPLAVRGLGNTLRARWLAARRI
                     KPARVRVAARGNVALPQRPPANRVSAVPLRPLPAVSVPSIMAGVDAAKPAGAALLPPA
                     RRQPTPASVAAAKAAV"
     gene            complement(842..1354)
                     /locus_tag="VHN20_15660"
     CDS             complement(842..1354)
                     /locus_tag="VHN20_15660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HEX2727256.1"
                     /translation="MLLRHAKSAWPDGTGDLERPLAGRGREAAPRMGAYLAGEQLIPD
                     LVLVSPARRTQETWALVRPHLGDAAVRTEPRIYEAPAERLLAVARETDAGTATLLIVG
                     HNPGLADLLRLLVGGGDRLALTKAMTKYPTAGLAVIDLPNGAWRELSPRSGRLDRFVT
                     PKSLGLGEDD"
     gene            complement(1379..>2415)
                     /locus_tag="VHN20_15665"
     CDS             complement(1379..>2415)
                     /locus_tag="VHN20_15665"
                     /inference="COORDINATES: protein motif:HMM:NF018829.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MlrC C-terminal domain-containing protein"
                     /protein_id="HEX2727257.1"
                     /translation="LMVASADFISAFRTFPHTDRGAAGTRCFDWLPRVLSWKAGPARA
                     FGQFPFLIPVTAGCTILEPAHSLYEELKNIEADTGVHLSLTMGFPPADVADVGPSVIA
                     YGREQELVDEAASRLYAAVIDAEPDFAAHRGVPVVEAVVQAMGIARRAGRPVILADTQ
                     DNPGAGAPATTTGVIEELLRQGAERALVGIVHDPIAAGEAHAAGVNGHVSSLGGEGEG
                     PGQVPVAGPWRVVALSDGRYDAPSAILHAGQTNLGPSALLAKEGVEVLVSSIRQQPVH
                     REAFTHLGIDLQSRGIIALKSSVNFRAAFQAIAEKVIVCLAPGVNLEDPSGFTYTKIR
                     PDVRLRPGEP"
BASE COUNT          394 a          851 c          833 g          337 t
ORIGIN      
        1 acggctgctt tggccgccgc gaccgaggcc ggcgtcggct ggcggcgcgc cggcggcagc
       61 agcgccgcgc ctgccggctt cgccgcgtcg accccggcca tgatgctcgg cacggacacc
      121 gcgggaagcg gccgcagcgg caccgccgag acccggttgg caggcggcct ttgcggcaac
      181 gccacattgc ccctggctgc gaccctgacg cgggcgggct tgatgcgtcg cgcggccagc
      241 cagcgcgcac gcagcgtgtt gccgagtccg cgcacggcta gcggcgccgg cggtccggat
      301 gcagccggga ggcggcattc cgctggcgcc cagcgccgca cgatggcgag cgccgacttg
      361 cgatcgagct cgaggtagta gcggcgcaac agcttgacgg ccgcatcggc gccgtgctca
      421 gcggtcgcaa agccgacatg gccctcctcg tcggcgccga tctcgccact ccatcgcgcc
      481 tgcttgatgc accaatagtt gttgagcttg acgcagcgcg tcaccaccgg gcgctcgacc
      541 ctcagcaaga ccgcgagggc cgacaacggg agcggatcaa ggtcgcgcac ggcttccgcg
      601 cgccagttcg tcacggcgcg cgcattcgcc gcgaacgccg gaacgtcagg cggaaccgcg
      661 ccttcgacct ggtccgcgct gccgcgcagg tcggcggtca tgacgggaag ctgcgccacc
      721 agctgcgcgc ttccggctag catcaacatc agcccgacgg tcagggacag caagggaccc
      781 ccacggtttc acacgaccac gcaacactga tcggcaagtt cgacaaccgg cggcaccagc
      841 gtcagtcgtc ttcgccgagc ccaagggact tcggcgtgac gaaacgatca agacgacccg
      901 atcgtggcga aagttcgcgc caggcgccgt tcggcaagtc gatcaccgca aggccggcgg
      961 tcgggtattt cgtcatggcc ttcgtcaagg cgaggcggtc gccgccgccg accagcagcc
     1021 gcagcaggtc tgcaaggccg ggattgtggc cgacgatcag cagcgtggcg gtgccggcgt
     1081 ccgtttcgcg cgcgaccgcg agcaggcgct cggcaggagc ttcgtagatg cgcggctcgg
     1141 tgcggacggc tgcgtcgccg aggtgaggcc tgaccagggc ccaggtttcc tgtgtgcggc
     1201 gcgccggcga gacgaggaca agatccggga tcagctgctc gccggcgaga taggcaccca
     1261 tgcgcggcgc agcttcacgg ccgcggccgg caagcggccg ctcgaggtcg cccgtgccgt
     1321 cgggccaggc ggatttggca tgacgcaaga gcatcaggcg acgggtcgtg gtggacaatc
     1381 agggctcccc aggcctgagg cgcacgtcgg gcctgatctt ggtgtaagtg aaaccggatg
     1441 ggtcttcgag gttaacgccc ggcgccaggc aaacgatcac cttttccgca atcgcctgga
     1501 aagcggcgcg aaaattgacc gacgatttca aggcgatgat cccgcgcgat tgcaggtcga
     1561 tgccgagatg cgtgaaggcc tcccggtgaa ccggctgctg acggatgctc gagaccaaca
     1621 cctcaacccc ttccttcgca agcaacgcgc taggccccaa attggtttga ccggcgtgca
     1681 ggatggcgga gggcgcgtcg tagcgcccgt cgctcagcgc cacgacccgc cacggcccgg
     1741 cgacgggaac ctgcccaggc ccctcccctt ccccgccgag gctcgacacg tgcccgttca
     1801 cccctgcggc atgcgcttct ccggctgcga tgggatcgtg cacgatgccg acgagcgcgc
     1861 gctcggctcc ttgccgcaac agctcctcga tcaccccggt cgtggtcgca ggcgccccgg
     1921 cgcccgggtt gtcctgcgtg tctgcgagga tgaccgggcg gccggcgcgc cgcgcgatgc
     1981 ccatcgcctg caccaccgct tccaccaccg gcacgccgcg gtgcgccgcg aaatccggct
     2041 ccgcgtcaat caccgccgca tacaggcggc tcgcggcctc gtcgaccagt tcctgctcgc
     2101 ggccgtaggc gatcacgctg ggaccgacgt cggcaacatc cgccggcgga aagcccatgg
     2161 tgagggacag gtggacgcct gtatcggcct cgatattctt cagttcctcg tagagcgaat
     2221 gggccggctc gaggatcgta cagccggccg tgaccgggat caggaacggg aactgcccga
     2281 aggcgcgcgc cggcccggcc ttccaggaca aaacgcgcgg cagccagtcg aaacaacgcg
     2341 tccccgccgc gccccggtca gtgtgcggga aggtgcggaa ggcggagatg aaatcggcgc
     2401 tcgcgaccat cagct
//
LOCUS       DATAIQ010000953         2262 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_257559, whole genome shotgun sequence.
ACCESSION   DATAIQ010000953 DATAIQ010000000
VERSION     DATAIQ010000953.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2262)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2262)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2262
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_257559"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..250
                     /locus_tag="VHN20_15670"
     CDS             <1..250
                     /locus_tag="VHN20_15670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HEX2727258.1"
                     /translation="PTGMQETVTKILNNACMAQREDVAQQNIALRKDLSAAGLIFNDV
                     DPKPFRDKLSESGYYKEWRTKFGEEAWNLLEDASGKLA"
     gene            352..2259
                     /locus_tag="VHN20_15675"
     CDS             352..2259
                     /locus_tag="VHN20_15675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012559984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HEX2727259.1"
                     /translation="MRSGTNEAAIDDVLDSHAPTAAAAVIEPGVPHRSALGVMMRPIE
                     AISAVLLVGLVGLVLVSVFWRYVLSSPITAADEVASFLFLWLVMFGAVIAIDRNEHLR
                     LALLLNALRPQARRMLEALGLVIMATFLGALLPSAIEHTYFEMDVISPGLEISNAWRV
                     AGIPLGITLMLVALAAKLWREASPRDILLGVAIVGAAVAVLWLMTPVFAQIGKANILV
                     LLVGVIAVCLTIGVPIGFCFGCGALAFLLFSTRLPLTVIVGRMDEGMSSLILLSVPVF
                     VLLGCILDATGMGKAIVDFLGSLLGHVRAGMSYVMLGSLYLVSGISGSKVSDMATVAP
                     ALFPEMKRRGNKPEEMVALLGTGAIMADTVPPSIVLIVIGSVAGISIAALFASGFIVA
                     LFLLIILAVAARWKAGSESLVGVRRAPMKVVGRALLFAAPALVLPFLVRSAVTEGVAT
                     ATEVSTIAVLYALITGMLLYGGIGLRDMYRMLIETAAMTGAILLILGTASAAAWALTQ
                     TGFAQYLASVMKGLPGGWVVYMAVTIAVFLILGCLLEGLPAIVLLAPLMFPIAKDLGI
                     DSVHYAMTVVVSMNIGLFAPPIGIGYYIACSIGKVAPDAAMGTIWFYLGALVLGLIAI
                     ALVPAISIGLI"
BASE COUNT          305 a          753 c          754 g          450 t
ORIGIN      
        1 gccgaccggc atgcaggaaa ccgtcacgaa gatcctcaac aatgcctgca tggcccagcg
       61 cgaggacgtc gcgcagcaga atatcgcgct gcgcaaagat ctctcggcgg ccgggctgat
      121 cttcaacgat gtcgatccca agccgttccg cgacaagctg tcggagtccg gatactataa
      181 ggaatggcgg acgaagttcg gcgaggaggc ctggaacttg ctcgaggacg caagcggcaa
      241 gcttgcctga acgcccgtcc caagcacgtt cgcggccggg cgcggcagcg ccgcccggcc
      301 gtcccttagg tgagaatgcg aggctgccgc gaccggcaag gggatgccag catgcgctcg
      361 ggcacgaatg aagcagcgat agacgacgtt ctcgactccc atgcgcccac ggccgccgct
      421 gccgtgatcg agcccggcgt gccgcatcgt tccgccctcg gcgtcatgat gcggccgatc
      481 gaggcaatct cggcggtgct cctggtcggg ctggtcgggc tcgttctggt cagcgtcttc
      541 tggcgctacg tgctttcttc tccgatcacg gccgcggacg aggtcgcgtc ctttctgttc
      601 ctctggctcg tgatgttcgg agccgtgatc gcgatcgacc gcaacgagca tttgcggctc
      661 gcgctgctgc tgaacgcgct gcggccgcaa gcccggcgca tgctcgaggc cctgggtctg
      721 gtcatcatgg cgacgttcct cggcgccctg ctgccgtcgg cgatcgagca tacctatttc
      781 gagatggacg tgatctcgcc gggcctcgag atctccaatg cctggcgcgt ggccgggatc
      841 ccgctcggca tcacgctgat gctcgtcgcc ctcgcggcga agctgtggcg cgaggcgagc
      901 cccagggaca ttctcctcgg cgtcgccatt gtcggcgccg cggtcgcggt tctgtggctg
      961 atgacgccgg tcttcgccca gatcggcaag gccaacatcc tcgtcctgct cgtcggcgtg
     1021 atcgccgtgt gcctcaccat cggcgtgccg atcggcttct gcttcggctg cggcgccctc
     1081 gccttcctgc tgttctcgac caggctgccg ctgaccgtga tcgtcggccg catggacgag
     1141 ggcatgtcga gcctgatcct gctgtcggtg ccggtcttcg tgctactggg ctgcatcctc
     1201 gacgccaccg gcatgggcaa ggcgatcgtt gacttcctcg gctcgctcct cggtcacgtg
     1261 cgcgccggca tgtcctacgt gatgctcggc tcgctctatc tggtgtccgg catctcgggc
     1321 tcgaaggttt cggacatggc gacggtcgcc ccggccttgt ttcccgagat gaaaaggcgc
     1381 ggcaacaagc cggaggagat ggtcgcgctg ctcggcaccg gggccatcat ggcggatact
     1441 gtgccgccga gcatcgtgct catcgtgatt ggctcggtgg cgggcatctc gatcgctgcc
     1501 ctgttcgcga gcggcttcat cgtcgctctg ttcctgctga tcatccttgc cgttgccgcc
     1561 cgctggaagg ccggctccga gagtctcgtg ggggtgcgcc gcgcgcccat gaaggtggtc
     1621 ggcagggcgc tgctgttcgc ggcgccggcg ctggtgctgc ccttcctggt gcgcagcgcc
     1681 gtcacggaag gtgtcgccac cgccaccgag gtttcgacga tcgcggtgct ctatgccctg
     1741 atcacgggca tgctgctcta cggcggcatc gggctgcgcg acatgtaccg catgctgatc
     1801 gagaccgcgg cgatgaccgg cgccatcctg ctcatcctcg ggactgcgtc ggcggcggcg
     1861 tgggcgctca cgcagacggg gttcgcccag tatctggcga gcgtgatgaa gggcctgccc
     1921 ggcgggtggg tcgtctacat ggccgtgacc atcgcggtct tcctgatcct cggatgcctg
     1981 ctcgaggggc tgcccgcgat cgtgctgctg gcgccgctga tgttcccgat cgccaaggat
     2041 ctgggcatcg acagcgttca ctacgcgatg acggtcgtcg tctcgatgaa tatcggcctg
     2101 ttcgcgccgc cgatcggcat cggctattac atcgcctgct cgatcggaaa ggtcgcgccg
     2161 gacgcggcca tggggacgat ctggttctat ctcggcgcgc tggtcctcgg cctgatcgcc
     2221 atcgccctcg tgccggccat ctcgatcggc ctcatctgat cg
//
LOCUS       DATAIQ010000954         1553 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_349679, whole genome shotgun sequence.
ACCESSION   DATAIQ010000954 DATAIQ010000000
VERSION     DATAIQ010000954.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1553)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1553)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1553
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_349679"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..601)
                     /locus_tag="VHN20_15680"
     CDS             complement(<1..601)
                     /locus_tag="VHN20_15680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013165028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEX2727260.1"
                     /translation="MRKSAKGIGLAIVGAGRVGLFRGEVAARHPAVEWIGIAEKNPDR
                     GKQVAEAIGADFVTTDHRELLRRPEVTAAIIATDEHLHVDPIMASVERGVSMLIEKPL
                     ATDLGESARVLKAIEQAGVDAVVGYTQRFRRKWLAGKEKVRTAALGDVTLVTSRAFMN
                     RLVAIDNYKRTDKPETISPMVISGTHALDIVMWYMEAKKP"
     gene            complement(585..>1553)
                     /locus_tag="VHN20_15685"
     CDS             complement(585..>1553)
                     /locus_tag="VHN20_15685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013165026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEX2727261.1"
                     /translation="LAEVKALTKPATATLDYQDIIRNPDISVVYISTTPESNHYPIAR
                     DCLKAGKHVLLEKPISLELEEADDLIALARRGNLKFTIGYSQRFNPKFAFAKKKIADG
                     TLGDVVSVMVSRHITRGLGKKISTRGKLSPVVMESTHDLDFVFWLLEPAKPVRVYSQG
                     AYGVMKSVNGSFDCMWTTINMDNGALVVIGGGWNLPPGYPNFCATWLEVTGTEGALIL
                     DDTHRDNWLNTMGRGSEFPMSTMPGEQVDHVFAGQMGPETIHFLEACLRNQAPMVAAE
                     HARMVMATYLAADLSADINEPVDFPLSNSAMAAIHDMTGGKRAQVG"
BASE COUNT          236 a          495 c          528 g          294 t
ORIGIN      
        1 cgggcttctt cgcctccatg taccacatga cgatgtcgag ggcgtgcgtg ccggagatca
       61 ccatcggcga gatcgtctcg ggcttgtcgg tgcgcttgta attgtcgatc gcgacgagcc
      121 ggttcatgaa ggcacgcgag gtgacgaggg tcacgtcgcc gagcgctgcg gtgcgcacct
      181 tctccttgcc ggccagccat ttgcgccgga agcgctgcgt atagccgacg accgcgtcga
      241 cccccgcctg ctcgatcgcc ttgagcacgc gcgccgactc gccgagatcg gtggcgagcg
      301 gcttctcgat cagcatggag accccgcgct cgaccgaggc catgatcgga tcgacgtgga
      361 ggtgttcgtc tgtggcgatg atcgccgccg tcacttccgg ccggcgcagg agctcgcggt
      421 ggtcggtggt gacgaaatcg gcgccgattg cctcggcgac ctgcttgccc cggtcggggt
      481 tcttctcggc gatgccgatc cactcgaccg ccggatggcg cgccgcgacc tcgccgcgga
      541 acaggccgac gcgcccggcg ccgacgatgg cgagcccgat tcccttagcc gacttgcgca
      601 cgcttgcctc ccgtcatgtc gtggatcgct gccatcgccg aattcgacag ggggaagtcg
      661 accggctcgt tgatgtcggc cgacaggtcg gccgccaggt aggtggccat caccatgcgg
      721 gcatgctcgg cggcgaccat gggcgcctgg ttgcgcaggc atgcctcgag gaagtggatc
      781 gtctcggggc ccatctggcc ggcgaagacg tggtcgacct gctcgcccgg catggtcgac
      841 atcgggaact cgctgccgcg gcccatcgtg ttgagccagt tgtcgcggtg cgtgtcgtcg
      901 aggatcagcg caccttcggt tccagtgacc tcgagccacg tcgcgcagaa gttcggatag
      961 cccggcggga ggttccagcc gccgccgatc acgaccaggg cgccgttgtc catgtttatg
     1021 gtcgtccaca tgcagtcgaa cgagccgttg accgacttca tgacgccgta ggcgccctgc
     1081 gaatagacac gcaccggctt ggccggctcg agcagccaga acacgaagtc gaggtcgtgg
     1141 gtcgattcca tcaccaccgg cgagagtttt ccgcgcgtgc tgatcttctt gccgaggccg
     1201 cgcgtgatgt gccggctcac catcaccgag accacatcgc cgagcgtgcc atctgcgatc
     1261 ttcttcttgg cgaaggcgaa tttcgggttg aaacgctgcg aatagccgat cgtgaacttg
     1321 aggttgccgc gccgggccag ggcgatcagg tcgtccgcct cctccagctc gagcgagatc
     1381 ggcttctcca gaagcacgtg cttgccggcc ttcaggcagt cgcgggcgat cgggtaatgg
     1441 ttcgattccg gggtcgtcga gatgtagacg acggagatgt ccgggttcct gatgatgtcc
     1501 tggtagtcga gcgtggcggt ggcgggcttg gtaagggcct tcacctcggc cag
//
LOCUS       DATAIQ010000955         1517 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_162709, whole genome shotgun sequence.
ACCESSION   DATAIQ010000955 DATAIQ010000000
VERSION     DATAIQ010000955.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1517)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1517)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1517
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_162709"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..214)
                     /locus_tag="VHN20_15690"
     CDS             complement(<1..214)
                     /locus_tag="VHN20_15690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012385299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNase H family protein"
                     /protein_id="HEX2727262.1"
                     /translation="MSDRVTIYTDGACSGNPGPGGWGALLMYDGREKELSGGEPQTTN
                     NRMELTAAIMALEALKRSCTVDLFTDS"
     gene            complement(328..1293)
                     /locus_tag="VHN20_15695"
     CDS             complement(328..1293)
                     /locus_tag="VHN20_15695"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003600712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004413 - homoserine kinase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HEX2727263.1"
                     /translation="MAVYTEVTDEELKAFIGTYKIGRVLSCKGIAEGVENTNYFLHTS
                     DGSYILTLYEKRVREADLPFFLGLMEHLARRGLTCPLPVRNKKGEALGRLAGRPAAII
                     TFLEGLSVRRPTARHCQAVGEALAQLHLAGSDFTMRRPNALSVSGWRSLFAAAEADAD
                     KVSPGLAERARRDLEDLEAAWPSGLPGGVIHADLFTDNVLFIGDAVSGLIDFYFACTD
                     AFAYDLGICLNAWCFESDGSFNLTKGRSMISGYESVRRLTEPEIAALPTLCRGSALRF
                     MLTRLVDWLNVPPGALVKPKDPLEYDRKLAFHRRVVSATDYGLER"
     gene            complement(1297..>1517)
                     /gene="ispH"
                     /locus_tag="VHN20_15700"
                     /gene_synonym="lytB"
     CDS             complement(1297..>1517)
                     /gene="ispH"
                     /locus_tag="VHN20_15700"
                     /gene_synonym="lytB"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017485864.1"
                     /note="catalyzes the conversion of
                     1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into
                     isopentenyl diphosphate (IPP) and dimethylallyl
                     diphosphate (DMAPP); functions in the nonmevalonate
                     isoprenoid biosynthesis pathway; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HEX2727264.1"
                     /translation="RLVLRADEIDWSEFAGVRRLGLTAGASAPEVLVEEIIDAFARRF
                     TVTVETVSTADENVFFPLPRDLRGEAAE"
BASE COUNT          260 a          522 c          504 g          231 t
ORIGIN      
        1 gcgagtccgt gaacagatcg acggtgcagg accgcttcag cgcctcgagc gccatgatcg
       61 cggccgtcag ctccatccgg ttgttggtgg tctgcggctc gccgcccgac agctccttct
      121 cgcgcccgtc atacatgagc agcgcccccc agccgccggg cccgggattt cccgagcagg
      181 cgccgtccgt gtagatcgtc acgcggtcgc tcatgctccg gccccagctg atcctgctgg
      241 cgcgaatggg gcacgcccca agcgcgagcg ggcgatgccc cgagcgcgcg ccgtccgtgt
      301 cgatcgtgac gcaatcgccc ccgtccatca tcgttcgagc ccgtaatcag tggcgctcac
      361 gacacgccga tggaaggcga gcttgcggtc gtattcgagc gggtccttgg gcttgaccag
      421 cgcgcccggc ggcacgttga gccagtcgac gaggcgcgtc agcatgaagc gcaacgccga
      481 gccgcggcac agggtgggaa gggcggcgat ttccggctcc gtcaggcggc gcacgctctc
      541 atagcccgag atcatcgacc tgcccttggt gaggttgaag gagccatcac tctcgaagca
      601 ccaggcgttc aggcagatgc cgaggtcata ggcgaacgcg tccgtgcacg cgaaatagaa
      661 atcgatcagc cccgatacgg cgtcgccgat gaacagcacg ttgtcggtga agagatcggc
      721 gtgaatgacg ccgccgggca gcccggacgg ccacgccgcc tcgaggtcct cgagatcccg
      781 tcgcgcacgc tcggcaaggc cgggcgagac cttatccgca tccgcctcgg cagccgcgaa
      841 aagcgaccgc catcccgaca cggacaacgc gttcgggcgc cgcatggtga aatcgctgcc
      901 cgcgagatgg agttgggcga gcgcctcgcc gacagcctgg caatggcgcg ccgtcgggcg
      961 gcgcaccgac aagccttcca gaaaggtgat gatggcggcc ggccggccgg caagccggcc
     1021 cagcgcctcg cccttcttgt tccgcaccgg cagcgggcag gtcagaccgc ggcgggcgag
     1081 gtgctccatc aggccgagga agaacggcag atcggcctcg cgcacccgct tctcgtaaag
     1141 ggtcaggatg tacgagccgt cgctcgtgtg gaggaagtag ttggtgttct ccacgccttc
     1201 cgcgatgccc ttgcacgaga gcacgcgccc gatcttgtat gttccgatga aggccttcaa
     1261 ttcctcatcg gtgacctcgg tatagactgc cacgccctac tccgcggcct cgccacgcaa
     1321 atcccgcggc agtgggaaga acacgttctc gtccgcggtc gacacggtct cgacggtgac
     1381 cgtgaagcgg cgcgcgaacg cgtcgatgat ctcttcgacc aggacttccg gggcggaagc
     1441 ccccgcggtc aggcccagcc ggcggacgcc ggcgaactct gaccagtcga tctcgtcggc
     1501 gcgcagcacg agccggg
//
LOCUS       DATAIQ010000956         1509 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_212073, whole genome shotgun sequence.
ACCESSION   DATAIQ010000956 DATAIQ010000000
VERSION     DATAIQ010000956.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1509)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1509)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1509
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_212073"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1295)
                     /locus_tag="VHN20_15705"
     CDS             complement(<1..1295)
                     /locus_tag="VHN20_15705"
                     /inference="COORDINATES: protein motif:HMM:NF019259.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1592 domain-containing protein"
                     /protein_id="HEX2727265.1"
                     /translation="MAAGTRLRFPESDAAPARIEAFGRSLVGLVNRAAPEKSALLLKP
                     TNRKPHTGGERIKPGSGDEQILRSWVDTLARLTPAEAAAALRYSDDAALPPVGAPVLR
                     RLTHSQYNNTVRDLLGELSQPAGQFPPEDFVNGFNNQYQEQSLSPALFEAYSAAAEKL
                     ARNVIRRGNLAALGARAAFVRQFGEKAFRRPLTPPETKRYETLLASEPVFEKGAQAVI
                     EAMLQSPNFLFRLDDTPDAALKPYATASRLSYALWNTMPDKALLESAAGGELGTPEGL
                     QRVVRRLLAAPQAKEALNEFVAQWLRFDRALTSARDRRLYPNFSRETAVAMTEETRRF
                     VADLVWNNRDFTELFTAPHGYVNPDLATLYGVTAPTKEFDRVDFTPESERAGILGQGL
                     FLTLTSKPNDTSPTARGLFIREHFLCQKVADPPPGVSTDL"
BASE COUNT          244 a          456 c          549 g          260 t
ORIGIN      
        1 aggtccgtgc tgacgcccgg cggcgggtcc gcgactttct ggcagaggaa atgttcgcgg
       61 atgaagaggc cgcgggcggt cggcgaggta tcgttcggct tcgacgtcag cgtgaggaac
      121 aggccctggc cgaggatgcc cgcgcgctcg gattcgggag tgaagtcgac gcggtcgaac
      181 tctttggttg gcgcggtgac gccgtacagc gtcgcgaggt cggggttcac gtagccgtgg
      241 ggcgctgtga acagctcggt aaagtcgcgg ttgttccaga ccaggtcggc gacgaagcgg
      301 cgcgtctctt cggtcatcgc aacggcggtc tcacgcgaga agttgggata caagcgacgg
      361 tcgcgggctg acgtgagcgc gcggtcgaag cgcagccact gcgcgacaaa ctcgttcagc
      421 gcctctttgg cctgcggggc tgcgagcagc cgccggacca cgcgctggag gccctcgggt
      481 gtgccgagct cgccgcccgc cgcgctttcc agcagcgcct tgtccggcat cgtgttccac
      541 agcgcgtagg agagccggct cgcggtagcg tacggtttca gcgcggcgtc gggcgtatcg
      601 tcgaggcgga agaggaagtt cggcgactgc agcatcgctt cgatgacggc ttgcgcgcct
      661 ttctcgaaga cgggctcgga ggcgagcagg gtctcgtagc gtttggtttc gggcggcgtg
      721 agcggcctgc ggaaggcctt ctcgccgaac tgccgcacga aggcggcacg cgcgccgaga
      781 gcggccagat tcccgcgcct gatgacgttc cgcgccagct tttcggcagc ggcactgtag
      841 gcctcgaaca gcgccggcga gaggctttgc tcctgatatt gattgttgaa gccgttgacg
      901 aagtcctcgg gcgggaactg gcccgcaggc tggctgagct ctccgagcag atcgcgtacc
      961 gtgttgttgt actgactgtg cgtgaggcgg cgcagaacag gagcacctac gggaggcagc
     1021 gcggcgtcat cggaatagcg cagcgcggcg gccgcctcgg ccggggtcag acgtgcgagc
     1081 gtatcgaccc aggagcgcag aatctgctcg tcaccgctgc ccggcttgat gcgttcgccg
     1141 cccgtgtgcg gcttgcgatt cgtcggcttc agcagcagcg ccgacttctc gggcgcggcg
     1201 cgattcacga gcccgaccag cgatcgtcca aaggcttcga tacgggcagg cgcggcatcg
     1261 ctttccggga agcgcagacg tgttcccgcg gccacgccct ccggcgagtg gcacgtccgg
     1321 caagcggtct tttcgagtac cggatacacg gacgttacga aatcggctgc cggggccgcc
     1381 gtgagcgaag acaagaatag agcgggaagg agcaaacgca cggggttctt tcatggtagc
     1441 gcgagaaacg tgcgcttctc gattggaaca accgccggct ctgagggcgt gctacactgc
     1501 cccgcatct
//
LOCUS       DATAIQ010000957         3951 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_70170, whole genome shotgun sequence.
ACCESSION   DATAIQ010000957 DATAIQ010000000
VERSION     DATAIQ010000957.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3951)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3951)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3951
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_70170"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..150
                     /locus_tag="VHN20_15710"
     CDS             <1..150
                     /locus_tag="VHN20_15710"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400943.1"
                     /note="catalyzes the formation of acetyl phosphate from
                     acetyl-CoA and phosphate; can also act with other
                     short-chain acyl-CoAs; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HEX2727266.1"
                     /translation="ADAAGIVLGARVPIILTSRADSMLTRLASCAVASLVADAQRRRL
                     AVRKV"
     gene            154..1371
                     /locus_tag="VHN20_15715"
     CDS             154..1371
                     /locus_tag="VHN20_15715"
                     /EC_number="2.7.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018262112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008776 - acetate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006083 - acetate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0006113 - fermentation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetate/propionate family kinase"
                     /protein_id="HEX2727267.1"
                     /translation="MVPVLLVLNAGSSSLKFQVFEAPDSGDPRPIFKGLYEGLGGAAR
                     FAVRGTEGAVLDEVSWAGEAVGHEEALMHLVAWLREHQGGRKLAAIGHRVVHGGESHS
                     GAVLVDETVLQQLAALVPLAPLHQPHNLKPIGIVRRRLPHVPQVACFDTGFHRSQPEI
                     AQMYALPREMRERGVRRYGFHGLSYDYIASVLGQYDGVLAGGRVVVAHLGNGASLCAL
                     NAGKSVATTMGFSALEGLPMGTRCGALDPGVVFYMLREMKLNAEEAERLLYTKCGLLG
                     VSGLSNDMRALRAQASDNPDARKAIDLFVYRITREIGSLIAALGGIDALVFTAGIGEN
                     DVATRSEVIAALAWAGFRLDPDANSRGGPQLTTEPGPKAWVIPTNEELVIARQMQEVL
                     ARTPARAADMEVV"
     gene            1371..1883
                     /locus_tag="VHN20_15720"
     CDS             1371..1883
                     /locus_tag="VHN20_15720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009798052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727268.1"
                     /translation="MEAATSKRPQSPATNELGDETFMSASDLRAYMTEMDMARASKEV
                     DKMNRADKAREELTKQLSELVDLTPERLRQIVQTLQAKLRAAAGRGQTELMVMRFPTA
                     LCTDKGRAINNHDKDWPDTLTGRPRQAYELWRDHLKAAGYNLSAIIVEWPGGLPGDVG
                     FFLRWGQQKR"
     gene            1914..>3951
                     /locus_tag="VHN20_15725"
     CDS             1914..>3951
                     /locus_tag="VHN20_15725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010682364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3141 domain-containing protein"
                     /protein_id="HEX2727269.1"
                     /translation="MKRTVSTGDEGQPPAPEEQPNLVGLQTKLASVYQERCLSALQRY
                     TQALKAAGDAWVDGSAGPSDPAELVRDANTYLVDFAQRTILFWDTLRERGNNWIEHEK
                     AGKPPLLDYEWEMIADARTFERPANYALVQIIPPSGVKIEPDRRPFVIIDPRAGHGPG
                     IGGFKQDSQVGVALKAGHPVYFVIFFAEPMPGQTLADVSRAEAEFLRIIGERHPQTRK
                     PVVVGNCQGGWAAMLVGAVEPELLGPLVINGAPMSYWAGNDGENPMRYAGGILGGAWP
                     ALLASDLGAGQFDGAHLVENFEYLNPANTFFNKYYTLFSKIDTEPERFLEFERWWGGF
                     FLMDRQEIKWIVENLFVGNKLAAGEAEWSEGRTFDLRAIRSPIIVFASLGDNITPPQQ
                     AFNWVADIYPTTEALKANGQVIVGLMHESVGHLGIFVSGKVAKREHTQIVDLIDYIEH
                     LPPGLYGMQIEEQRADGSVRYDVVLTERRVEDLQVLQKYGRKDEVPFESVKAVSDSLA
                     TAYETLIRPVLAPAVTPPAAKVARALHPQRAQRWAVSDLNPWLLPLRGMADMVKANRS
                     PRDTDGPFAVTERWLAAVTSSYLDLYRDLRDAAVENTFFRAYSAPAMAMPREAEPAAE
                     NAADPRSVPAVQHALAHIKEGDRTDAIVRIALLLTKLGTEPRRLSVMKRVRELVG"
BASE COUNT          702 a         1271 c         1321 g          657 t
ORIGIN      
        1 gccgacgccg ccggaatcgt cctcggggcg agggtcccga tcattctcac cagccgcgcc
       61 gactcgatgc tcacgcggct tgcttcatgt gcggtggcct cgctggtcgc cgacgcgcag
      121 cgcaggcggc ttgcggtccg gaaggtctga gccgtggtcc ctgtcctcct ggtcctcaac
      181 gcaggatcgt cgagcctcaa gttccaggtc ttcgaggcgc cggacagtgg tgatccgcgg
      241 cctatcttca aggggcttta cgaaggcttg gggggcgccg cgcgctttgc cgtgcgcggg
      301 accgagggcg cggtgctcga tgaggtgtcg tgggcggggg aggcggtcgg gcacgaagag
      361 gcgctcatgc acctcgttgc gtggctgcgc gagcatcagg gcgggcgcaa gctggcggcg
      421 atcggccacc gggtggtcca tggcggcgaa agccattcag gcgccgtgct cgtcgacgag
      481 accgtgctgc aacagcttgc cgcgctggtg cctctggcgc cgctgcatca accccacaac
      541 ctgaagccga tcggcatcgt gcgacggcgc ctgccgcacg ttccgcaggt ggcctgcttc
      601 gacacgggat tccacaggag ccagcccgag atcgcgcaga tgtacgcgtt gccgcgcgag
      661 atgcgcgaac gcggtgtgcg ccgatacggc tttcacgggc tctcctacga ctacatcgcc
      721 tcggttctgg ggcaatacga cggcgttctc gccggcggcc gggttgtcgt tgcgcatctc
      781 ggtaatggcg ccagcctgtg tgcgctcaac gccggcaaga gcgtggcgac gacaatgggc
      841 ttctccgcgc tcgagggcct gccgatgggc acccgttgtg gcgcgctcga cccgggtgtc
      901 gtcttctaca tgttgcgcga gatgaaactc aacgcggagg aggcggaacg cctcctttac
      961 accaaatgcg gcctgctcgg cgtatcgggc ctgtccaacg acatgagggc gttgcgcgcg
     1021 caggcttcgg ataatccgga cgcgcgcaag gcgatcgacc tgttcgtcta ccggatcacg
     1081 cgcgagatcg gctcgctgat cgccgcgctc ggcggcatcg atgcgctcgt cttcacggcc
     1141 ggcatcggcg agaacgacgt tgccacgcgc agcgaagtga tcgcggctct cgcatgggcg
     1201 gggttcaggc tcgacccgga cgccaactcg cgtggcggcc cgcagctcac aaccgagccc
     1261 ggccccaagg catgggttat tccgacgaac gaggaactgg tgatcgcccg gcagatgcaa
     1321 gaggtacttg cccggacgcc ggcgcgcgcc gctgacatgg aggtggtgtg atggaagcag
     1381 cgacgtcgaa acgaccgcaa tcccccgcaa cgaacgaact cggcgacgag accttcatgt
     1441 cggcatccga cctgcgggcc tacatgaccg agatggacat ggcacgcgcg tcgaaggaag
     1501 tcgataagat gaaccgtgcc gacaaggcgc gcgaggaact gacgaagcag ctctcggagc
     1561 tggtggacct gacccccgag cggctgcgcc agatcgtgca gacgttgcag gcgaagctgc
     1621 gggccgcagc cggccgcggc cagaccgagt tgatggtcat gcgcttcccg acggctcttt
     1681 gcaccgacaa gggacgcgcc atcaacaatc acgacaagga ttggcccgac acgctcaccg
     1741 ggcggccgcg tcaggcctac gagctatggc gcgatcatct caaggctgcc ggctacaatc
     1801 tcagcgccat catcgtcgaa tggccgggcg gattgcccgg ggacgtcggc ttttttctca
     1861 gatgggggca gcaaaaacga taggcgtcgc atccagctca agggacaaaa gccatgaagc
     1921 ggacggtttc caccggcgat gaggggcaac cgcctgcgcc ggaagagcag cccaacctgg
     1981 tcggcttaca gacaaaactc gccagcgtct atcaggagcg ctgtctctcg gcgttgcagc
     2041 gttatacgca agcgctgaag gcggccggtg acgcgtgggt cgatggttcg gctgggccga
     2101 gcgaccctgc ggagctggtg cgcgatgcca acacctacct ggtcgacttc gcacagcgca
     2161 caatcctgtt ctgggatacg cttcgcgagc gcggcaacaa ctggatcgag cacgagaagg
     2221 ccggcaagcc gcctctgctc gactacgaat gggagatgat cgccgacgcg cgaaccttcg
     2281 agaggccggc aaactacgcg ctggtgcaaa tcatcccgcc aagcggcgtc aagatcgagc
     2341 cagaccgtcg tcccttcgtc atcatagatc cgcgcgccgg ccacgggccg ggcatcggcg
     2401 gcttcaagca ggactcgcag gtgggcgtcg cgctcaaggc cgggcatccc gtctatttcg
     2461 tgatcttctt cgcggagccg atgcccgggc agaccctcgc cgatgtctcg cgcgccgaag
     2521 cggagttcct tcgtatcatt ggcgagcgtc acccgcagac gcgcaagcca gttgtggtcg
     2581 gcaattgcca gggcggatgg gcggcaatgc tcgtgggcgc ggtggagccc gaactgctcg
     2641 ggccgttggt catcaacggc gcgccgatgt cctactgggc gggcaatgat ggcgagaatc
     2701 cgatgcgcta tgccggcggg atcctcggcg gcgcctggcc ggcgctgctg gccagcgacc
     2761 tcggcgccgg ccagttcgac ggcgcgcacc tggtcgagaa tttcgagtat ctgaacccgg
     2821 ccaatacttt cttcaacaaa tactataccc tcttctcaaa gatcgacacg gagccggagc
     2881 ggttcctcga attcgagcgc tggtggggcg gattcttcct gatggatcgc caggagatca
     2941 agtggatcgt cgagaacctg ttcgtcggca acaagctggc cgccggcgaa gccgagtggt
     3001 ccgaaggacg caccttcgac ctgcgcgcga tccgctcgcc catcatcgtc ttcgcatccc
     3061 tgggcgacaa catcacgccg ccgcagcagg cgttcaactg ggtcgccgac atctacccga
     3121 ccacggaggc actcaaggcc aacgggcagg tgatcgtcgg cctcatgcac gaaagcgtcg
     3181 gtcatctcgg catctttgtg tcgggcaaag tcgccaagcg cgagcacacg cagattgtcg
     3241 acctgatcga ttacatcgag catcttcccc ccggcctcta tggcatgcag atcgaggaac
     3301 agcgcgccga cggcagcgtg cgttacgacg tcgtcctcac ggaacggcgc gtggaggact
     3361 tgcaagttct gcagaaatat gggcgcaagg atgaagtccc gttcgagagc gtcaaggccg
     3421 tctcggattc gctcgcgacg gcttacgaga cgctgatccg tccggtcctc gcgccggcgg
     3481 tcacgccgcc ggccgccaag gtcgcaagag cgctccatcc gcagcgcgcg cagcgctggg
     3541 ccgtatcgga cctgaatccc tggctgctgc cgttgcgggg catggcagac atggtcaagg
     3601 caaaccgttc gccgcgcgac accgatggcc cgttcgcggt gaccgagcga tggctagcag
     3661 ccgtcacgtc gtcgtacctg gacctctatc gggatttacg cgacgcggcc gtcgagaaca
     3721 cgtttttccg cgcgtattcg gcaccggcca tggcgatgcc tcgcgaggcc gagcccgctg
     3781 cggagaatgc cgcggatccg cgatccgtac ccgccgtcca gcatgccctc gcgcatatca
     3841 aggagggcga ccggacggac gcgatcgtgc gcatcgcctt gttgctgacg aagctgggca
     3901 cggagccgcg ccggctgtcc gtgatgaaac gcgtacgcga gctggtgggc g
//
LOCUS       DATAIQ010000958         5979 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_212599, whole genome shotgun sequence.
ACCESSION   DATAIQ010000958 DATAIQ010000000
VERSION     DATAIQ010000958.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 5979)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5979)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5979
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_212599"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..214)
                     /locus_tag="VHN20_15730"
     CDS             complement(<1..214)
                     /locus_tag="VHN20_15730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727270.1"
                     /translation="MSRKLTAWTFMSCLGLGAAVVLAAGPSAAQTRWNLPAAYPADNF
                     HTENLNLFAKDVADGTGGALQITVHAN"
     gene            complement(254..1570)
                     /locus_tag="VHN20_15735"
     CDS             complement(254..1570)
                     /locus_tag="VHN20_15735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007758164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0015556 - C4-dicarboxylate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015740 - C4-dicarboxylate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HEX2727271.1"
                     /translation="MLDTLQRIEIAALLLALLTVLLAGGVWIAIALMACGFAAMLFVA
                     DVPIGQVLATTVWGNSASWTLAALPLFIWMGEILFRTRLSEEMFRGLSPWLGWLPGRL
                     MHVNVLGCGIFGSVSGSSAATCATIAKIALPELRKRGYDEMVSLGSLAGAGTLGILIP
                     PSIMMVVYAVAANVSIIQVFLAGFLPSLIVMALYSGYIAVWALLNPDKQPPPDPPMSL
                     RRKLVESANLIPCLLLILLVFASLLLGWATATECAAWGVLGSLAIAWWSGALTWDSFW
                     ASVMGSTRLTAMIMLILAGASFMSTAMAYTGLPAALAQWVDGLGLSPYALIAALTAMY
                     IVLGTALDGISMIVLTTVVVLPMIKQAGFDLIWFGIFLVLIVEIAEVSPPVGFNLFVL
                     QTMSGKDSLTVARASLPFFLLLVITVGIITVFPQIVTVLPKLAFPD"
     gene            complement(1573..2115)
                     /locus_tag="VHN20_15740"
     CDS             complement(1573..2115)
                     /locus_tag="VHN20_15740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015740 - C4-dicarboxylate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HEX2727272.1"
                     /translation="MLRAMLDSLYRLAGHLAGLFLVAIFVLMMGLSVGRQVGFNIPAG
                     DDIASWCMAAMAFLALAHTFKSGEIIRVGLVLDRLHGRVRHVTEIACLLIGSAFVGFF
                     AWHAVGMTYDSWRFADMAQGVLAIPLWIPQLGYASGLVILFIAFIDELVHVLGGNPPR
                     YEKPAATAAEAVERAAHSGI"
     gene            2427..3581
                     /locus_tag="VHN20_15745"
     CDS             2427..3581
                     /locus_tag="VHN20_15745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727273.1"
                     /translation="MGRSALRARREHLGHVQYLLAVAAVVATLLSALAAANYALNPYL
                     YSPGYKADVAAAFERGSSFAVFDLNFDMRALRREHIARMQVTPDVVVLGGEQWQEAHA
                     GLMPHVRFYNAHVHRDYAEDILAVTELLVRHERLPRTMIIGIRDRTFSPPATRADWWW
                     KFFLPEYRAMANRIGAEQFRWTETLSAAYLRELLSFRLFRTRFGRWLTADAMPGPTRE
                     TTLDDMDLLLPDGSIQWSRRHQALFGPDFAMADVTQAATRRKNDVLPIDDRAVEAMDR
                     LIGFLRGQGVRVVLAYAPLHPALHEQLAGTPYREGLARIAATVEKLSDRHGLEVVGSF
                     DARAAGCMASMFIDGEHANADCLRRLIGQVPAGVAERAPRHSAIGLRGSM"
     gene            3602..5119
                     /locus_tag="VHN20_15750"
     CDS             3602..5119
                     /locus_tag="VHN20_15750"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015049.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBOAT family O-acyltransferase"
                     /protein_id="HEX2727274.1"
                     /translation="MTFHSLGFVFAFLPFWLVGFIVVARRWGSEAGLLWLIAASLSFH
                     AAAGSPSLGVLSVSVLGNYGFAQALRSYANRRAAARRLLAAGIAANLALLAYCKYVNF
                     FVDGPNAVFGTAVGHLQLLLPLGISFYTLIQIGYLADVYSGRARPFGIDRHVLFAAFF
                     PYAAAGPIVVHKDMAPQYDHVGRKPLDLSPIVTGLTVFAIGLFKKLVLADSLAPHADA
                     LFNGAASGAALNPLSAWVGALAYTLQLYFDFSGYCDMALGIGCMFGLRLPLNFDSPFK
                     AVGIMDFWRRWHMTMTRFFSIYVFTPMASWRVRHLVLRDDSRTMHFLNATAAPAIYTF
                     ALAGLWHGAGWTFVAFGLLHGLALVINHAWREWSLPALPKLVGWGLTMSVVIAGMVLF
                     RSDSLATAGGILAALAGLAGAGHAPVPLSPAALREAGALIAVLGAIVLLAPNTQQLMH
                     GHKYWHTSDPAPEPVKDHAWLAWRPSPAWAAVTAVLLVLAISAMGGAGRLSYHDF"
     gene            5346..>5979
                     /locus_tag="VHN20_15755"
     CDS             5346..>5979
                     /locus_tag="VHN20_15755"
                     /inference="COORDINATES: protein motif:HMM:NF024267.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS-domain containing protein"
                     /protein_id="HEX2727275.1"
                     /translation="MANGFVLFDAGDRLVLTNQKFRSFYPRLDDRLTPGLSFRDLIEA
                     QLSLGHVLPAPRSADEYLQWRVALVNNQEKSHDVQLDTGRWLRISDRRMNNGGIAGIH
                     MDITELKQREEELKAKNLHFDTALNNMSHGLCMFDADQTLIVCNSRYLDLYGFSAAVV
                     KPGIKLRQIMEYSVLIGNYRPEDGQRAITDRPSHAALREQAVLHEQLRDGR"
BASE COUNT         1015 a         2012 c         1939 g         1013 t
ORIGIN      
        1 cgttggcgtg aaccgtgatc tggagcgcgc cgcccgtccc gtcggccaca tcctttgcga
       61 acaggttcag gttctcggtg tgaaaattat ccgccggata ggcggcgggc aggttccatc
      121 tcgtctgcgc cgccgagggg cccgccgcaa gcaccaccgc ggcaccgagc cccaggcacg
      181 acatgaatgt ccatgccgtg agtttccgtg acatccgtcc catggtctgg ccctcccacc
      241 cgctgccgag ccgtcagtcg gggaatgcca atttcggcaa aaccgtcacg atctggggga
      301 aaactgtaat gatcccgacc gtgatgacaa gcaggaggaa gaaggggagg gaggcgcgcg
      361 cgacggtgag cgagtccttg ccgctcatgg tctgcagcac gaacaggttg aacccgaccg
      421 gcggcgagac ctctgcgatc tcgacgatca ggaccaggaa aatgccgaac cagatcaggt
      481 cgaagcccgc ctgcttgatc atgggcagca cgaccaccgt cgtcagcacg atcatcgaga
      541 tgccgtcgag cgccgtgccg agcacgatat acatggcggt gagcgcggcg atcagcgcgt
      601 atgggctgag gccgaggccg tcgacccact gggccagggc cgcggggagg cccgtatagg
      661 ccatcgccgt ggacatgaac gaggccccgg cgaggatcag catgatcatc gcggtcaggc
      721 gcgtcgaacc catcacgctc gcccagaacg agtcccaggt cagggcgccg gaccaccacg
      781 cgatggcgag gctgccgagc acgccccagg cggcacattc ggttgctgtc gcccagccga
      841 gcagaagcga ggcgaatacc agcaggatca gcagcaggca cgggatgagg ttcgccgatt
      901 ccacgagctt gcggcgcagg ctcatcggcg gatcgggcgg cggctgcttg tcgggattga
      961 gaagcgccca gacggcgata tagccggaat agagcgccat cacgatcagg ctcggcagaa
     1021 atccggccag gaaaacctgg atgatcgaga cgttggcggc gaccgcgtag accaccatca
     1081 tgatcgaggg cgggatcagg atgccgagcg tgcccgcgcc ggccagcgag ccgaggctga
     1141 ccatctcgtc gtagccgcgc ttcctgagct ccggcagggc gatcttggcg atcgtggcgc
     1201 aggtggcggc cgacgagccg gacaccgagc cgaagatgcc gcagccgagc acgttcacgt
     1261 gcatcagccg gccggggagc cagcccagcc acggcgacag gccgcggaac atctcctccg
     1321 acagccgggt ccggaacagg atctcgccca tccagatgaa cagcggcagg gccgcgagcg
     1381 tccacgacgc gctgttgccc cacacggtcg tcgccagcac ctggccgatg ggcacgtcgg
     1441 cgacgaacag catcgccgcg aagccgcacg ccatgagcgc gatggcgatc catacgcccc
     1501 ccgcgagaag cacggtcagc agcgccagca gcagcgccgc gatctcgatc cgttgcagcg
     1561 tgtcgagcac ggtcagatcc ccgaatgcgc ggcgcgctcg accgcttcgg cggcggtcgc
     1621 ggcgggcttt tcgtagcgcg gcgggtttcc gcccagcacg tgcacgagct cgtcgatgaa
     1681 ggcgatgaac aggatcacga ggccgctcgc atagccgagc tgcgggatcc agaggggaat
     1741 ggcgagcacg ccctgggcca tgtcggcgaa gcgccaggaa tcgtaggtca tgcctaccgc
     1801 gtgccaggcg aagaagccga cgaaggccga gccgatcaga aggcaggcga tctccgtgac
     1861 gtgccgtacc cggccatgga gcctgtcgag gacgaggccg acgcggatga tctcgccgga
     1921 cttgaaggtg tgcgcgagcg ccagaaatgc catggcggcc atgcaccagg aggcgatgtc
     1981 gtcgcccgcc gggatgttga agccgacctg acgaccgacc gagaggccca tcatgaggac
     2041 gaagatcgca accaggaaca ggcccgcaag atggcccgcg aggcgataga ggctgtcgag
     2101 cattgcacgc agcatcctgg ccaaccttcc gaaggaagac gagacggccc cgcatgcatt
     2161 gtcaaggagc gtcaggagga gccgattcca cgtgagtgga aacggccctg agccccgcgc
     2221 cgacgcatat gcgcaacgcc gggccggcgc gaaaagcacg agccgcgccg atgcgtgcag
     2281 cgttaaccac gttttacaga ctgtgcgctt agatatccgt gccgaaagtc ttcttcggac
     2341 cagtgcagaa cgcacgagaa ggtgttgagt cgatgacccg gatggatgct ggcgcaatct
     2401 tggcaccgga tgggcctcgt cgcagcatgg gccgatctgc cttgcgcgcc cgccgcgagc
     2461 atctcggcca cgtgcaatac ctgctcgccg tcgcggccgt cgtcgccacc ttgctgagcg
     2521 cgctcgccgc ggcgaattac gcgctcaacc cttatcttta ttcgccgggc tacaaggcag
     2581 acgtggccgc cgccttcgag cgcggcagca gcttcgccgt gttcgatctg aacttcgaca
     2641 tgcgcgccct gcgccgcgag cacatcgcgc gcatgcaggt cacccccgac gtcgtcgtgc
     2701 tcgggggcga gcagtggcag gaagcccatg ccgggctcat gccgcatgtc cgcttctaca
     2761 atgcgcatgt ccaccgcgac tatgccgagg acattctcgc cgtgacggag ctcctcgtcc
     2821 ggcacgagcg cctgccgcgg accatgatca tcggcatccg cgatcgcacc ttctcgccgc
     2881 cggcaacgcg cgccgactgg tggtggaagt tctttcttcc ggagtatcgc gccatggcga
     2941 accggatcgg cgccgagcag ttccgctgga ccgagacctt gagcgccgcc tatctgcgcg
     3001 aactgctctc gttccggttg ttccgcaccc gcttcggccg gtggctcact gccgatgcga
     3061 tgcccggccc gacgcgcgaa accacgctcg atgacatgga cctcctgctg cccgacggct
     3121 ccattcaatg gtcgcgccgg catcaggcgc tgttcggccc ggatttcgcg atggccgacg
     3181 tgacgcaggc ggccacccgg cgcaagaatg acgtcttgcc catcgacgac cgcgccgtcg
     3241 aggcgatgga ccgtctcatc ggcttcctgc gcgggcaggg cgtgcgcgtc gtcctcgcgt
     3301 atgctccctt gcatccggcg ctccacgagc agctggcggg cacgccctat cgtgagggcc
     3361 tggctcgcat cgctgcgacc gtggagaagc tcagcgacag gcacggcctg gaggtggtcg
     3421 gcagcttcga tgcgcgtgcc gccggctgca tggcgtcgat gttcatcgac ggcgagcacg
     3481 ccaatgccga ctgcctcagg cgtctcatcg ggcaggtgcc cgcgggggtg gccgaacgcg
     3541 cgccacggca ctcggccatc ggcctgcgcg gcagcatgtg agcgcgagcg ggcacgccga
     3601 catgacgttt cattcattgg gcttcgtgtt cgcgttcctg ccgttctggc tcgtcggctt
     3661 catcgtcgtc gcgcgccgct ggggcagcga ggccggcttg ctctggttga tcgccgcctc
     3721 gctttccttc cacgcggcgg ccggatcgcc gagcctcggc gtgctgtcgg tgtcggtcct
     3781 cggcaattac ggcttcgcgc aggcgctcag gagctacgcg aaccggagag ccgccgcgcg
     3841 tcgcctgctc gcagcgggca tcgcagccaa cctcgctctg ctcgcttatt gcaaatacgt
     3901 gaacttcttc gtcgacggcc ccaatgcggt gttcggcacg gcggtgggcc accttcagct
     3961 cctgctgccg ctcggcatct cgttctacac cctgatccag atcggctacc tcgccgacgt
     4021 ctacagcggc cgggcgcggc cgttcggcat cgatcgtcac gtgctgttcg ccgccttctt
     4081 tccatacgcc gcggccggcc cgatcgtggt gcacaaggat atggcgccgc aatacgatca
     4141 cgtcggcagg aagccgctcg atctttcgcc catcgtcacg ggcctgaccg tgttcgccat
     4201 cggcctgttc aagaagctgg ttctcgccga ctcgctggcg ccccacgccg acgcgctgtt
     4261 caacggcgcg gcctcgggcg ctgcgctcaa tccgctcagc gcctgggtcg gcgcgctcgc
     4321 ctacactctg cagctctact tcgatttttc cggctactgc gacatggcgc tcgggatcgg
     4381 ctgcatgttc ggcctgcgcc ttccgctcaa cttcgactcg cccttcaagg cggtcggcat
     4441 catggatttc tggcgtcgct ggcatatgac catgacgcgc ttcttcagca tctacgtgtt
     4501 caccccgatg gcaagctggc gggtccgcca cctggtgctc cgggacgaca gccgaacgat
     4561 gcatttcctc aacgccaccg cggcgccggc catctacacg tttgcgctgg ccggcctgtg
     4621 gcacggggca ggctggacct tcgtcgcgtt cgggctgctg catggccttg ccctggtgat
     4681 caatcacgcc tggcgcgagt ggagccttcc ggctctgccg aagctcgtcg gttggggcct
     4741 gacgatgtcg gtcgtgatcg ccgggatggt cctgttccgg tccgacagcc tggcgaccgc
     4801 cggcggcatc ctggcggcgc tcgccggcct tgccggcgcc ggtcacgcgc ctgtgccgct
     4861 gagcccggcc gccctgcgcg aagcaggagc cctgatcgcg gtccttgggg cgatcgtgct
     4921 gctcgctccg aacacgcagc agttgatgca cgggcacaag tattggcaca cgtccgaccc
     4981 ggcgccggaa cccgtcaagg accatgcctg gctcgcctgg cggccgtcgc cggcatgggc
     5041 ggccgtaacc gcggtcctcc ttgtcctcgc catcagcgcc atgggcgggg cgggtcgctt
     5101 gtcttatcac gacttctgaa cgctccaccg atcagcccgc cgacgagggc ttgcgctcat
     5161 ggacgttcac gcgctcgtgt cttgaatagg atccgagcct tttatttccg agcaactatt
     5221 caacgttatc gtcgggctgt gctccgtggg tggacgacat ggcctcgaat tctccgactg
     5281 cctcttttgt gccgtcggtc tcttctcctg gagacgatcg ccaagtcgtc gaagccctgg
     5341 acgggatggc gaacggcttc gtgctgttcg atgccggcga ccgtctcgtc ctaaccaacc
     5401 agaaattcag gagtttttat ccgcgccttg acgatcggct tacgcccggc ctcagcttcc
     5461 gggacctgat cgaggcgcag ctctcgctcg gccatgttct gcctgcgccg cgttccgccg
     5521 atgaatactt gcaatggcgc gtggcgctcg tgaacaacca ggaaaagagc cacgacgttc
     5581 agctcgatac cggacggtgg ctgcgcatca gcgatcgccg catgaacaat ggcggcatcg
     5641 ccggcatcca catggacatt accgagctca agcagcgcga ggaggagctg aaggccaaga
     5701 accttcactt cgacacggcc ttgaacaaca tgagccacgg cctgtgcatg ttcgacgctg
     5761 accagacgtt gatcgtctgc aacagccgct acctcgatct ttacgggttt tcggcggcgg
     5821 tggtgaagcc cggcatcaag ctgcgccaga tcatggaata cagcgtcctg atcggcaatt
     5881 accggcccga ggacgggcag cgcgccatca ccgaccgccc gagccatgcc gccctcaggg
     5941 agcaggcggt gctgcacgag cagttgcgcg acggccgca
//
LOCUS       DATAIQ010000959         1853 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_163012, whole genome shotgun sequence.
ACCESSION   DATAIQ010000959 DATAIQ010000000
VERSION     DATAIQ010000959.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1853)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1853)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1853
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_163012"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(142..828)
                     /locus_tag="VHN20_15760"
     CDS             complement(142..828)
                     /locus_tag="VHN20_15760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007562140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEX2727276.1"
                     /translation="MARLSGIPLLKDAGVDLSGFEARSRWRRFEPDEILVDFDDLSTD
                     VYFLLSGEVRILIRTQSGKEVILGEMRGGQLFGELAAIDGVKRSANVTALTRGEVCIM
                     SSAVFRELILAAPPVTDRLLRLLAGRVRELNARLMEQAVLDLRHRLYSELLRLSVSRP
                     GHGSERVITPPPFHHVMAARIGCRREQITREFTSMTQEGLVERTRGALVIKRPEILEA
                     RIAEAMREDA"
     gene            974..>1853
                     /locus_tag="VHN20_15765"
     CDS             974..>1853
                     /locus_tag="VHN20_15765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017483852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX2727277.1"
                     /translation="MLHVNGLTYRIGDRVIFDRASFAAPTGARVGVVGRNGAGKTTLF
                     RIIQGEVAPEDGGITLPRAARVGAVAQEAPSGPERLIDVVLAADTERTALLAEAEAAE
                     GLRRAEIETRLADIGAHAAPARAAAILHGLGFDEEAQQRPCASFSGGWRMRVALAAVL
                     FAEPDILLLDEPTNYLDLEGTLWLYDYLARYPHTVLVISHDRELLDTAVDHILHLDRG
                     RLALYRGGYSSFARQLAEKQALEAKLKVKQDAERKHLQAFVDRFRAKASKARQAQSRI
                     KRLARLEPIAAIVEDET"
BASE COUNT          305 a          680 c          614 g          254 t
ORIGIN      
        1 ggagcggcgc acagaaccga tcgaggcgcg ggcgggctga tgcggctcgg gcaatttccg
       61 attggtctcc ttctcgccga cggctgacgt gcccccgcgc ccgtagcgca ggcgtcttca
      121 ggccgcaact ccgggcgcgc gtcaggcgtc ttcccgcatc gcctcggcga tgcgcgcttc
      181 gaggatctcc gggcgcttga tgacgagcgc gccgcgcgtg cgctcgacca gcccctcctg
      241 cgtcatcgac gtgaactcgc gcgtgatctg ctcgcgccgg cagccgattc gcgccgccat
      301 cacgtggtgg aacgggggcg gcgtgatgac gcgctcgctg ccgtgccccg gccgcgacac
      361 cgacaggcgc agtagctcgg aatagagccg gtggcgcaga tcgagcaccg cctgctccat
      421 gagccgggca ttgagctcgc gcacgcggcc ggcaagcagg cgcagcagcc ggtccgtcac
      481 gggcggagcg gcgaggatca gctcgcgaaa caccgccgac gacatgatgc agacctcgcc
      541 gcgcgtcagg gccgtcacgt tcgccgagcg cttgacgccg tcgatcgcgg cgagctcgcc
      601 gaacagctgg ccgccgcgca tctcgcccag aatcacctcc ttgcccgact gcgtgcggat
      661 caggatgcga acctcgcccg agagcaggaa atagacgtcg gtcgacagat cgtcgaagtc
      721 gacgaggatc tcgtcgggct cgaagcggcg ccagcgcgag cgcgcctcga agccggacag
      781 atcgacgccg gcgtccttca gcaacggaat gcccgagagg cgagccatat ccaaacccct
      841 aaagacgaaa cccctgatca acggcacgat gtcgacgcaa ccgggccggc aggtcaagcc
      901 aagctgcgtc aagacttgcg ttttccgtga acgcgccttg cgcccctgcc atccagaagc
      961 cacaaggcgg gccatgttgc acgttaacgg tttaacttac cggatcggcg accgcgtcat
     1021 tttcgatcgc gcctcgttcg cggccccgac gggggcccgg gtcggggtgg tcgggcgcaa
     1081 cggcgccggc aagacgaccc tgttccgcat catccagggc gaggtcgccc ccgaggacgg
     1141 cggcatcacc ctgccccgcg ccgcccgcgt cggcgccgtc gcccaggagg cgccgagcgg
     1201 ccctgagcgg ctgatcgacg tggtgctcgc cgccgacacg gagcgcaccg cccttctcgc
     1261 cgaggccgag gcggcggaag gcctgcgccg cgccgagatc gagacgcgtc tcgccgacat
     1321 cggagcccac gcggcgccgg cccgcgccgc cgccatcctg cacgggctcg gcttcgacga
     1381 agaggcgcag cagcgaccct gcgcgtcgtt ctcgggagga tggcggatgc gcgtggcgct
     1441 ggccgccgtg ctgttcgccg agcccgacat cctgcttctc gacgagccga ccaactatct
     1501 cgacctcgag ggcacgctct ggctctacga ttacctcgcc cgctacccgc acacggtgct
     1561 ggtcatcagc cacgaccgcg agctgctcga caccgctgtc gaccacatcc tgcatctcga
     1621 ccgcggccgg ctcgcgctct accgcggcgg ctactcgtcc tttgcccgcc agctcgcgga
     1681 gaaacaggcg ctcgaagcca agctgaaggt caagcaggac gcggaacgca agcacctgca
     1741 ggccttcgtc gaccgcttcc gggccaaagc ctcgaaggcg cgccaggcgc aatcgcggat
     1801 caagcggctc gccaggctcg agccgatcgc cgccatcgtc gaggacgaga ccc
//
LOCUS       DATAIQ010000960         2337 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_163033, whole genome shotgun sequence.
ACCESSION   DATAIQ010000960 DATAIQ010000000
VERSION     DATAIQ010000960.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2337)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2337)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2337
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_163033"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1401
                     /locus_tag="VHN20_15770"
     CDS             <1..1401
                     /locus_tag="VHN20_15770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011473163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HEX2727278.1"
                     /translation="GVTTRGQLDRTIPPLVRAAYNEALHCNGNGACFTWDPDEAMCPS
                     YKATRDRRHSPKGRASLTREWLRQLASLGYDPAADATALRRRSGWPTLLQWARNTQAR
                     RRGEPDFSHAVKDAMDGCLACKSCSGQCPIKVDVPGFRARFLELYHSRYLRPVRDYLV
                     ASLETTLPALGTMRSVYNLLLDNPLGRAAMRTVGLVHTPRLSRLSMRRELAARGIAEA
                     TPQALAELSDTERARCVVLVQDAFTSWYETHVVTAALDLMPAMGFKPFIAPFRPNGKP
                     LHVHGFLGRFIRAASRNSAMLRALAQTGVELVGVDPSMTLTYRSEYAMLPERDRPPPV
                     LLLQEWLARHLDAIPEVPQTDTEYLLLPHCSERALAIASLRSWQSAFSAAGASLRILS
                     SGCCGMAGTYGHEAEHRATSEQIYEMSWKPQITHWAESGRLVATGYSCRSQVKIVDGG
                     ALSHPAEALLAHLRQR"
     gene            complement(1489..2268)
                     /locus_tag="VHN20_15775"
     CDS             complement(1489..2268)
                     /locus_tag="VHN20_15775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011473165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
                     /protein_id="HEX2727279.1"
                     /translation="MAKRTSKEQPAVSGVSAVERALAVLTAFRRGDGALSLAELAERT
                     GLVKSTIMRLAVSLQRYRLLARLPDGTYRLDAEALRLGTAYQQAFSLSDHVMPVLGDL
                     AAKTGETASFYIRQGSERLCLFRVESASRIRMHVQPGDTRPMDNSGIAQVLRRYEASP
                     PGPDDELPLFTSGVTDPHAAALAMPVFGSGDALVGAISISGPVSRLTAARADEVKGVL
                     LEAAHKLTTACGGTPTSRAAKPGPRRTTAPAGKKVNAASPS"
BASE COUNT          370 a          805 c          770 g          392 t
ORIGIN      
        1 ggcgtcacca caagaggcca gctcgaccga acgattccgc ccctggtgcg cgctgcctat
       61 aacgaagcgc tccactgcaa cgggaacggc gcctgcttca cgtgggatcc ggatgaggcc
      121 atgtgcccct cctacaaggc gacccgcgac cggcggcact cgcccaaggg ccgcgcctcg
      181 ctcacgcggg aatggctgcg ccagctcgcc tcgctcggct acgatccggc ggctgacgca
      241 acggctttgc gccgccgttc agggtggccg acgttgctgc aatgggctcg caacacgcag
      301 gcacgccgac gcggcgagcc ggacttttcc cacgcggtca aggacgcgat ggacggatgc
      361 ctcgcatgca agtcgtgcag cgggcagtgc cccatcaagg tggacgtgcc cgggttccgc
      421 gccaggttcc tggaactcta tcacagccgt tacctgcggc cggttcgcga ctacctggtc
      481 gcctcgctcg agacgacatt gcccgcgctc ggaaccatgc gcagcgtcta caacctgctg
      541 ctggacaacc cgttgggccg cgccgccatg cggaccgtag gcctggtgca cacgccgaga
      601 ttgtcgcggc tgtccatgcg ccgggaattg gccgcacgcg ggattgccga ggcgacccca
      661 caagcgctcg ccgaactttc ggacacggag cgggcgcgct gtgtcgtgtt ggttcaggat
      721 gcgttcacga gttggtacga gacgcacgtg gtgactgcgg cgctggatct catgccggcg
      781 atgggcttca agccgttcat cgcgcccttc cgcccgaacg gcaagccgct gcacgtccat
      841 ggattcctcg gccgcttcat ccgcgcggcg tctcgcaatt ccgcgatgct ccgcgcgctc
      901 gcacaaacgg gggtggagct ggttggtgtg gatccgtcca tgacgctgac ctatcgctcg
      961 gaatacgcga tgctgccgga acgcgaccgt ccgccgccgg tgctgctgct gcaggagtgg
     1021 ctggcccggc atctcgacgc catccctgaa gtcccgcaaa cggacaccga gtatctgttg
     1081 ctgccgcact gctcggagcg cgctctcgcc atcgccagtc tgcgcagttg gcagtcggcc
     1141 ttctcggccg cgggtgccag cttgcgcatc ctgtcctcgg gctgctgcgg catggcgggg
     1201 acttatggac acgaggccga gcatcgcgcg acgtccgagc agatctatga aatgagctgg
     1261 aagcctcaga ttacgcactg ggccgaaagc ggccgcctcg tcgcaactgg ctactcctgc
     1321 aggtcacagg tcaagatcgt cgacgggggc gctctgtccc acccggcaga ggctttgctg
     1381 gcgcatctgc ggcagcgctg agcggccgcg atgcaaaaac atcgccgtgc gtctccagct
     1441 cggctcagga gaggggggcg gcgccgcttt gccgatcgga tcgcgcgatc aactaggcga
     1501 ggcggcgttc acttttttgc cagccggcgc cgtcgtgcgc cgcggcccag gcttcgccgc
     1561 ccgcgaggtc ggcgtgccgc cacaggccgt cgtcagctta tgcgcggcct cgagcagaac
     1621 gcctttcacc tcgtccgccc gcgccgccgt caaccggctg actgggccgg agatcgagat
     1681 tgcgccgacg agggcgtccc cgctgccgaa gaccggcatg gccagcgcgg cggcatgggg
     1741 atcggtgacg cccgacgtga atagcggcaa ctcatcgtct ggtccgggag ggctcgcctc
     1801 atagcgccgc aacacctggg cgatgccaga gttgtccatc ggtctggtat cgccgggctg
     1861 cacgtgcatc cggatacggc ttgcgctctc cacccggaac aggcagagac gctcgctgcc
     1921 ctggcggatg tagaaggacg cggtctcgcc ggttttcgcc gccaggtctc ccaataccgg
     1981 catcacgtga tcggacaggc tgaaggcctg ctgataagcg gtgccgaggc gcaaagcctc
     2041 tgcatcgagg cggtatgtcc cgtccggcag gcgcgccagc aagcgatagc gttgcaggga
     2101 cacggcgagc cgcatgatcg tgctcttcac caacccggtg cgttcggcca gctccgcgag
     2161 gctcagggcg ccgtcgccgc gtcggaacgc ggtcagcacg gcgagcgccc gctcgacggc
     2221 ggacaccccg ctcactgcgg gctgctcttt cgacgtccgc tttgccatcc ccagttccgt
     2281 ctccaccagc ccgaaggctc tgcaaagcca ctatatcgag gaaaggggac cgctttt
//
LOCUS       DATAIQ010000961         2898 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_212746, whole genome shotgun sequence.
ACCESSION   DATAIQ010000961 DATAIQ010000000
VERSION     DATAIQ010000961.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2898)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2898)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2898
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_212746"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..384
                     /locus_tag="VHN20_15780"
     CDS             <1..384
                     /locus_tag="VHN20_15780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-(5'-phosphoribosyl)anthranilate isomerase"
                     /protein_id="HEX2727280.1"
                     /translation="RPVMKAVGIAEAGDLGALEAYGRVADRLLVDAKPPATVEALPGG
                     NGLTFDWRLIAGLDPGKPVMLSGGLDPGNVAAAVALTRVGAVDVSSGVERRPGEKDPD
                     KIEAFVKAARAAFATTDPGPARDRR"
     gene            436..1656
                     /gene="trpB"
                     /locus_tag="VHN20_15785"
     CDS             436..1656
                     /gene="trpB"
                     /locus_tag="VHN20_15785"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010685389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HEX2727281.1"
                     /translation="MTVPQNPNTFRAGPDERGHFGIFGGRFVAETLMPLILELEQAYD
                     EAKADPAFKAQMDADLKHYVGRPSPLYYAERLTQHLGGAKIYLKRDELNHTGAHKVNN
                     VLGQLLLAQRMGKKRIIAETGAGQHGVATATLCARFGLDCVVYMGAVDVERQKPNVFR
                     MKMLGAEVVPVQSGTRTLKDAMNEALRDWVTNVDNTFYCIGTVAGPHPYPAMVRDFQC
                     VIGREAREQIMAQEGRLPDSLIAAIGGGSNAIGLFHPFLDDRHIEIYGVEAAGHGLST
                     GLHAASLTGGRPGVLHGNRTYLLMNDDGQIQDAHSISAGLDYPGIGPEHAWLHEAGRV
                     TYLSATDQEALDAFQLLSKLEGIIPALEPAHALAKVIEIAPKKPKDHVMIMNLCGRGD
                     KDIFAVAEHLGVRM"
     gene            1653..2492
                     /gene="trpA"
                     /locus_tag="VHN20_15790"
     CDS             1653..2492
                     /gene="trpA"
                     /locus_tag="VHN20_15790"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HEX2727282.1"
                     /translation="MTSRIESTFARCRAEGRAALVTYVMAGDPDPKTSFEILKSLPKA
                     GADIVEFGLPFTDPMADGPAIQAAALRALKAGQSTARTLELVREFRKGNADTPVILMG
                     YFNPIYVYGVPRFLADAKAAGVDGLIVVDLPPEEDDELCLPALAAGLAFIRLATPTTD
                     DRRLPAVLANTAGFVYYVSITGITGAATPDFGKVASAVERIKRHTPLPVVVGFGVKSG
                     AHAAAIARSADGVVVGSALVNAVHGSLDGEGQATSQTVEAVTTLVRDLSEGVRSVSKA
                     RAA"
     gene            2615..>2898
                     /locus_tag="VHN20_15795"
     CDS             2615..>2898
                     /locus_tag="VHN20_15795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyl transferase
                     subunit beta"
                     /protein_id="HEX2727283.1"
                     /translation="MNWISEVVRPKIKTLFKRETPENLWIKCPETGQMVFHKDVEANG
                     WVIPVSNHHLRIDATQRLKLMFDSGTWLDVALPQVETDPLKFRDEKRYVDR"
BASE COUNT          484 a          998 c          985 g          431 t
ORIGIN      
        1 cggccggtca tgaaggcggt cggcatcgcc gaggccggcg acctcggcgc cctggaggct
       61 tacgggcggg tcgccgaccg gctgctggtc gatgccaagc cgccggccac ggtcgaagcc
      121 cttccgggcg gcaacgggct caccttcgac tggcgcctga tcgccggcct tgacccgggc
      181 aagccggtca tgctgtcagg aggcctcgat ccaggcaatg tcgccgccgc ggtcgcgctg
      241 acgcgtgtcg gtgcggtcga tgtctcgtct ggcgtcgagc gccggcccgg cgagaaggac
      301 ccggacaaga tcgaggcttt cgtgaaagcc gcccgcgcgg cgttcgccac gacggatccc
      361 gggcctgccc gagatcggcg ttaattcgcg caagccgggg ctgcccggca tgcgtccaac
      421 cagggacaag ctcgcgtgac cgttccgcag aatcccaaca cgttccgcgc cgggccggac
      481 gagcgcggcc atttcggcat tttcggcggc cgcttcgtcg ccgagacgct gatgccgctg
      541 atcctcgagc tcgagcaggc ctacgacgag gccaaggccg atccggcctt caaggcgcag
      601 atggatgccg acctcaagca ttatgtcggc cgcccgagcc cgctctacta cgccgagcgg
      661 ctgacgcagc atctcggcgg cgcaaagatc tatctcaagc gcgacgagct caaccatacc
      721 ggcgcccaca aggtgaacaa cgtgctcggg cagctgctgc tggcgcagcg catgggcaag
      781 aagcgcatca tcgccgagac cggcgccggc cagcacggcg tcgccaccgc caccctgtgc
      841 gcccggttcg gcctcgactg cgtcgtctac atgggcgccg tcgacgtcga gcggcagaag
      901 ccgaacgtct tccgcatgaa gatgctcggc gccgaggtgg tgccggtgca gtccggcacg
      961 cgcacgctca aggacgccat gaacgaggcg ctgcgcgact gggtcaccaa cgtcgacaat
     1021 accttctact gcatcggcac ggtggctggc ccgcacccct acccggccat ggtgcgcgac
     1081 ttccagtgcg tgattggccg cgaggcgcgc gagcagatca tggcccagga aggccggctg
     1141 ccggactcgc tgatcgcggc gatcggcggc ggctccaacg ccatcggcct gttccatccc
     1201 ttcctcgacg atcgtcacat cgagatctac ggtgtcgagg cggccggcca cggcctgtcg
     1261 acggggctgc acgccgcctc gctgaccggc ggccgcccgg gcgtgctgca cggcaaccgc
     1321 acctacctcc tgatgaacga cgacggccag atccaggacg cgcattcgat ctcggcgggc
     1381 ctcgactatc cgggcatcgg ccccgagcat gcctggctgc atgaggccgg ccgcgtcaca
     1441 tacctgtcgg cgacggacca ggaggcgctc gacgccttcc agctgctgtc gaagctggag
     1501 ggcatcatcc cggccctcga gcccgcgcac gccctcgcca aggtgatcga gatcgcgccg
     1561 aagaagccca aggaccacgt catgatcatg aacctgtgcg ggcgcggcga caaagacatc
     1621 tttgccgtcg ccgagcacct cggagtcagg atgtgacgag ccgcatcgaa tccactttcg
     1681 cccgctgccg cgcggagggc cgcgccgcgc tcgtcaccta cgtgatggct ggcgacccgg
     1741 acccgaaaac gtcgttcgag atcctcaaga gcctgcccaa ggcgggggcg gatatcgtcg
     1801 agttcgggct gcccttcacc gacccgatgg cggacgggcc ggccatccag gcggctgcct
     1861 tgcgcgccct caaggccggg cagagcacgg cccggacgct cgagctggtg cgcgagttcc
     1921 gcaagggcaa tgccgacacg ccggtcatcc tgatgggcta tttcaacccg atctacgtct
     1981 acggggtgcc gcgcttcctg gccgacgcca aggcggcggg ggtcgacggc ctgatcgtcg
     2041 tcgacctgcc gcccgaggag gacgacgagc tgtgcctccc ggccctcgcg gccgggctcg
     2101 ccttcatcag gctggcgacg ccgaccacgg acgaccggcg cctgccggcc gtgctcgcca
     2161 acacggccgg gttcgtatat tacgtctcga tcacgggaat taccggggcg gcgacgccgg
     2221 atttcggcaa ggtcgcgagc gcggtcgagc ggatcaagcg gcacacgccc ctgccggtgg
     2281 tggtcggatt cggggtcaaa tcgggcgccc acgcggcggc catcgccagg agcgcggacg
     2341 gggtggtggt cggttcagcc ctcgttaacg ccgtgcacgg gtccctggat ggcgaggggc
     2401 aggccacctc gcagaccgtc gaggcggtca ctacattagt gcgcgacctg agcgagggcg
     2461 tgcgttcggt gtcgaaagcc agggcggcct gagttatccc gcgccttttg gggcgggcag
     2521 gccggccggg cgagaccggc cgccgcagaa tatgctacgc gggacagccc accctgccct
     2581 cccgtgacgg gagggacgag gaggtaagcg atcgatgaac tggatctccg aggtcgtcag
     2641 gccgaagatc aagacgctgt tcaagcgcga gacgcccgag aacctttgga tcaaatgccc
     2701 cgagacgggg cagatggtct tccacaagga cgtggaggcg aacggctggg tcattcccgt
     2761 ctcgaaccac catctgcgca tcgacgccac gcagcgtctc aagctgatgt tcgattccgg
     2821 gacatggctc gacgtggccc tgccgcaggt cgagaccgat ccgttaaaat tccgtgacga
     2881 gaagcgctac gtcgaccg
//
LOCUS       DATAIQ010000962         2041 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_163237, whole genome shotgun sequence.
ACCESSION   DATAIQ010000962 DATAIQ010000000
VERSION     DATAIQ010000962.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2041)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2041)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2041
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_163237"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..720)
                     /locus_tag="VHN20_15800"
     CDS             complement(<1..720)
                     /locus_tag="VHN20_15800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727284.1"
                     /translation="MTRHEALPLVFAVLAVSASRPAAAQPLGLNPSAAPSDIGNPSSI
                     NPAARASDIRNPGAINPAAAASQIPRTGGPGAPPLAAPPIGRQRVAPLLEPTRRDRAP
                     TTPRQQRRQAAVPTPAEPPEGCRNGRPTIGTWEELKAHLASCWTVPEGTIGSSVTLRF
                     AISAAGELRGAPMTTATHVVPREMSARYKDAATRTLDRCLPVCPGAGFGAVLHENPLY
                     LRLVNDAPFPSRNHGPWMTIFA"
     gene            complement(730..999)
                     /locus_tag="VHN20_15805"
     CDS             complement(730..999)
                     /locus_tag="VHN20_15805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727285.1"
                     /translation="MRDVFGPGTVRATSLRLAARDYRRRQRRAMVMRAFLVVTLAASF
                     FSSVALMSGKGPSSGAVATRAAPFDLDPVTTGSVTKPARLQPPTR"
     gene            1458..1901
                     /locus_tag="VHN20_15810"
     CDS             1458..1901
                     /locus_tag="VHN20_15810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727286.1"
                     /translation="MGGIRGGMIGHGGFRGAATRVGPGWSGRGYLGPGFRGTAMRIHP
                     GWKGRGHIGPGFRHYGRDWRGYHHRYGYRKYHPYYYGGALSAGLLAASYGYDYPYSYA
                     ASPYYGAYPSYGYDGSEYEQSCPLLIRRVVGPKGRVVVRRQYLCR"
BASE COUNT          344 a          658 c          717 g          322 t
ORIGIN      
        1 ggcgaagatc gtcatccacg gcccgtgatt gcggctcggg aacggcgcgt cattaacgag
       61 gcgcagatac agcggattct cgtgcaggac cgcgccaaag cccgcccccg ggcagacggg
      121 caggcatctg tccagcgtcc ttgtcgcggc atctttgtat ctggccgaca tctctcgcgg
      181 aacgacgtgg gtcgccgttg tcatcggggc accgcgcaac tccccggccg cactgatcgc
      241 gaaacgcagc gtgaccgacg agccgatcgt accttccgga acggtccagc acgatgccag
      301 atgcgccttt agctcttccc acgtgccgat ggtcggacga ccgttgcggc agccctccgg
      361 aggctcagca ggggtcggca cggcggcttg tcggcgctgt tggcggggcg ttgtcggcgc
      421 gcgatcgcgg cgcgtgggct ccaggagcgg agcaacccgc tggcggccga tcggcggcgc
      481 tgcaagcggc ggcgctcctg gacctcccgt ccgcgggatc tgagaagcgg ccgcagccgg
      541 attgatcgca ccgggattgc gaatgtccga ggcccgggcg gccggattta tcgagctcgg
      601 attgccgata tcggacggcg ccgcactggg attcagaccg agcggttgcg cagcggcggg
      661 gcggctggcg ctgacggcga gcaccgcaaa aaccagaggc agggcctcgt gcctcgtcac
      721 cctgcacccc taccgggtcg gcggctggag cctcgccggc ttggtgacgg atcctgtcgt
      781 caccggatcg aggtcgaacg gcgcagcccg cgtggcgaca gcgccggaag agggaccttt
      841 cccgctcatg agcgctactg agctaaaaaa cgaagcggcc agggtgacga cgaggaaggc
      901 gcgcatgacc atggcgcgcc gctgccgccg gcggtagtcg cgcgcagcga ggcgcaggga
      961 cgtggcgcgg accgtgcccg ggccgaacac gtctcgcaac agcctcgctt cgtcacggcc
     1021 cggacgcgat gcagatggct caaaagcggg catgacacgg gctctccgat ccccaatgcg
     1081 tcgcacgcag gggcgatcgc ccctttgatc aagatcaata tccggagagc cggcaactca
     1141 aaatcggtat tgccgttgcg tgagcggtcg ccgaggtcga taatcaccca ggagttcgct
     1201 tgctgcggct gtcacctgta ccgcagcttc gggccggctc gggacgattg cggctccccc
     1261 acgggcctac ggctaagacg agcgaagccc gaacggggag agaacggatg cagaaggcta
     1321 ttatagtgct gggcgccctt gccgccggcg cgatcctagt cgcgggcgag gcctttgccc
     1381 gcccaggcgg ctttggcggg ggaggggggc gagcgggtgg tttcggcggc ggaacgcgcg
     1441 gcggttacca cgggagcatg ggcggaatcc gcggcggcat gatcggccac ggtggattcc
     1501 ggggagcggc gacgcgggtc ggccctggct ggagcgggcg cggctatctc ggccctggct
     1561 ttcgcgggac agccatgcgc atccacccgg gctggaaggg gcgcggccat atcggtccag
     1621 gctttcgcca ctacggccgt gactggcgcg gctatcacca ccgatatgga tatcgcaaat
     1681 accatccgta ctattacggc ggcgcgttga gcgccggcct gctcgcggcc tcttacggct
     1741 acgactaccc atactcctac gccgcatctc cgtattacgg cgcgtaccct tcttacggct
     1801 atgacggttc cgaatacgag cagtcctgcc cgttgctcat ccggcgcgtc gtcggtccca
     1861 aggggcgggt ggtggtccga aggcagtatc tctgtcgctg agcggcgtcg gtcagccatc
     1921 ggagcaaaat attccgctaa cgaggcgagg agagatccca tggcaaaggg acctgcaaac
     1981 ctgtcgcgag accgcgacga gccaggcaac gggccggatc cgttctcgtt caccgagacc
     2041 a
//
LOCUS       DATAIQ010000963         1658 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_258917, whole genome shotgun sequence.
ACCESSION   DATAIQ010000963 DATAIQ010000000
VERSION     DATAIQ010000963.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1658)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1658)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1658
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_258917"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            71..1144
                     /locus_tag="VHN20_15815"
     CDS             71..1144
                     /locus_tag="VHN20_15815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low specificity L-threonine aldolase"
                     /protein_id="HEX2727287.1"
                     /translation="MNFASDNVMGASAPVLEALIRANDGAEAAYGADAVTARVEQRFR
                     EIFERDVAALLVATGTATNALALAAAVPPWGLCLCHEESHVIDDECGAPEFFSHGAKL
                     AGLPGAGGKLAPATVEAYLAGLPRSVKQMPPSALSIAQVTEGGLVYGLEEIAALARIC
                     RARGVKLHMDGARFANALVALGCTPAEMTWKAGVDILSFGATKNGCLAAEAIVVFDPA
                     LAESLAYRRKRAGHLLSKGRFIAAQFEGYFGAGHWLDNARHANAMARRLSAELAALPG
                     VRLAWPCEANETFVILPRRLDQALKAAGAVYHPWSDKSLAEGDRLGKDETLVRLVTSF
                     ATREAEVDRFVEVARGALREAAA"
     gene            1277..>1658
                     /locus_tag="VHN20_15820"
     CDS             1277..>1658
                     /locus_tag="VHN20_15820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727288.1"
                     /translation="MTDLPAHAHRTGSLSRAMISAAIGVVLLLANPAVAQIPPYSQDD
                     EPLPPPTISRMLLRQGYEPVGRPRFQGDVYMVQALSPSGARVRLMVDAYNGSIIRSMR
                     LDEDLGPLPPRGREFLDREVDLDQL"
BASE COUNT          249 a          578 c          567 g          264 t
ORIGIN      
        1 gacgcgatcc aggcaggctt tttgccggat catgcactaa gctcgcggct cgtttcttga
       61 ggcaaggttg atgaatttcg ccagcgacaa cgtgatggga gcgagcgcgc ccgttctcga
      121 ggccctcatc cgggccaatg acggggccga ggccgcttac ggcgccgatg cggtgacggc
      181 ccgggtcgag cagcggttcc gcgagatttt tgagcgcgat gtggccgctc tcctggtggc
      241 gaccggcacg gcgacaaacg cgctcgccct ggcggcggcg gtgccaccgt ggggcctctg
      301 cctgtgccac gaggagtcgc atgtcatcga cgacgaatgc ggcgcgccgg aattcttcag
      361 ccatggcgcc aagctcgcag gactgcccgg cgccgggggc aagctcgcgc cggcgacggt
      421 cgaggcgtac ctggccggcc tgccgcgaag cgtgaagcag atgccgccgt cggcgctgtc
      481 gatcgctcag gtcaccgagg gcggcctcgt ctacgggctg gaggagatcg ccgcgctcgc
      541 gcggatctgc cgcgcacgcg gcgtcaagct gcacatggac ggcgcccgct tcgccaacgc
      601 gctcgtcgcc ctcggctgca cgcccgccga gatgacctgg aaagccggag tcgacatcct
      661 gtccttcggc gcgaccaaga atggctgcct cgccgcggag gccatcgtgg tgttcgaccc
      721 agccctggcc gagagcctcg cctatcgccg caaacgggct ggccacctcc tgtcgaaagg
      781 ccgcttcatc gcggcccagt tcgaaggcta tttcggggct gggcactggc tcgacaatgc
      841 gcgccacgcc aatgccatgg ccaggcgcct ctccgccgag ctggccgcgc tgcccggcgt
      901 gcggctggcc tggccgtgcg aggccaacga gactttcgtg atcctgccgc gcaggctgga
      961 ccaggccctg aaggcggccg gcgccgtcta tcacccgtgg tcggacaaga gcctcgccga
     1021 gggcgaccgc ctcggcaagg acgagacgtt ggtccgtctc gtcacgtcat tcgccacgcg
     1081 cgaggctgag gtggaccgct tcgtcgaggt cgcccggggc gcgctgcgcg aggccgccgc
     1141 ctagggccgc ggccggttta cgaaccatgg ttcagcttgc cggttcatcc ggcgctcagg
     1201 gtgcgtgccg tagcgccgcc gcattcgccc gcgagaaggg ctgccaacaa taccaacgac
     1261 agacggggat gaactgatga ccgatcttcc tgcgcacgca caccggaccg gtagcctgtc
     1321 gcgcgccatg atcagcgcgg ccatcggcgt ggtgcttctc ctcgccaacc cggccgtcgc
     1381 gcaaattcct ccctacagtc aggacgacga accgctgccg cccccgacca tcagccgcat
     1441 gctcctccgc cagggctacg agccggtggg acggccgcgc ttccagggcg acgtctacat
     1501 ggtgcaggct ttatcgccct caggtgcgcg cgtccggctt atggtcgacg cgtataacgg
     1561 ctccatcatc aggagcatgc gcctcgatga ggatctgggt ccgctgccgc cgcgggggcg
     1621 ggagttcctc gaccgcgagg tggatctcga ccagctcg
//
LOCUS       DATAIQ010000964         2513 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_213386, whole genome shotgun sequence.
ACCESSION   DATAIQ010000964 DATAIQ010000000
VERSION     DATAIQ010000964.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2513)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2513)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2513
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_213386"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1249
                     /locus_tag="VHN20_15825"
     CDS             <1..1249
                     /locus_tag="VHN20_15825"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF013206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HEX2727289.1"
                     /translation="LATGVPGVMAGIGMLWEKWGRAPWASILAPAQELLDRGFTFRDA
                     APAVAAKQDAIRRYPSSVKHLMPAGRLPQPDDVWHRRDMERTLRRLETAGWRDFYQGD
                     LARRIAAHVADVGGILTLDDLKRFEPRITPPYETRYRNARISSAVLANGGATVAQFLN
                     MMACFEPLPENDPRHWHRLIELMKLAWRDRIRYLGDPAHARVPLERLLSTDYAAGRVE
                     HLRQHPDAVDRLPAPAAGSSPGTANISAVDAEGNLIACTSSHGGSFGSCLTVPDTGIT
                     LGHGMCRFDPHPGLPNSVGPGKRPLNNVCPTIVSLPGRDIAVGQRGGRRIVSVVAQMC
                     QRFVDWNQTAAEAVAAPRLHVEQQEPGEFSESLPPAIAARLRALGHDFTAVKAVGGHA
                     NACERLNDGRLRGASNVWAAGVS"
     gene            1251..2021
                     /locus_tag="VHN20_15830"
     CDS             1251..2021
                     /locus_tag="VHN20_15830"
                     /inference="COORDINATES: protein motif:HMM:NF014670.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="creatininase family protein"
                     /protein_id="HEX2727290.1"
                     /translation="MRLDTLKWPEIAAVSDRVFLVPLGSTEQHGRHLPLQTDTAIVSA
                     IAERVERAAPDRIVLLPALWIGHSPHHAAFGCISLDVRPYMDLIAGICRSLVGMGARR
                     IVLLNGHGGNDVPCKAAMRELKTEFATRADLYIVYAAYWALAARRFSDIRKSPVGGMN
                     HACEMETSVMLSVAPGSVDMSRAEAGGPCHETGWRRSDMLQPRPYYIVNDFDEISESG
                     TVGLPEYASAAQGEQFLSAAAASVEELLAEVMTWNYQG"
     gene            complement(2065..>2513)
                     /locus_tag="VHN20_15835"
     CDS             complement(2065..>2513)
                     /locus_tag="VHN20_15835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727291.1"
                     /translation="TWTTGSGFGGGATLDPINSTFSLGGRMLGLRREEVPVVIAGEGV
                     ELRKQSLGSMSVAFVRASKGTDLRPALKGLPNDLCHCPHWGYVLKGKLRMHTKAGHQD
                     YAAGQAFYWAPGHAPEMLDDTEYVDFSPTAEFDAVINHILSQAQKG"
BASE COUNT          414 a          933 c          731 g          435 t
ORIGIN      
        1 cctcgccacc ggcgtccccg gcgtcatggc cggcatcggg atgctctggg aaaagtgggg
       61 ccgcgccccc tgggcgagca tcctcgctcc cgcgcaggaa ctgctcgacc gcggattcac
      121 gtttcgcgac gccgctcccg ccgtcgcggc gaagcaggat gccatccgcc gctacccctc
      181 ctcggtgaag cacctcatgc ccgcgggccg cctgccgcag cctgacgacg tctggcatcg
      241 ccgcgatatg gagcgcacgc tccgccgtct cgaaacagcc ggatggcgcg acttctatca
      301 aggcgacctg gcgcgccgca ttgctgccca cgtggctgac gtcggcggca ttctcacgct
      361 cgatgacctg aagcgctttg agccccgcat tactcccccg tacgaaacgc gctaccgcaa
      421 cgcccgcatc tcgagcgccg tcctcgccaa cggcggcgcc accgtcgccc agttcctgaa
      481 catgatggcc tgcttcgagc cgctcccgga aaacgatccc cgccactggc accgcctcat
      541 cgaactgatg aagctggcgt ggcgcgatcg catccgctac ctcggcgacc cggctcacgc
      601 gcgcgtcccg ctcgagcgcc tgttgagcac cgactacgcg gccgggcgtg tcgagcatct
      661 tcgccaacac cccgacgcgg tcgaccgcct gcccgctccc gctgccggct catctcccgg
      721 caccgccaac atctccgcag tcgacgccga aggaaacctg attgcctgca ccagctcgca
      781 cggaggctcg ttcggctcct gcctcaccgt gcccgatacc ggcatcaccc tcggccatgg
      841 catgtgccgc ttcgacccgc atccgggcct ccccaactcc gtcgggcccg gcaaaaggcc
      901 tcttaacaac gtctgcccga ccatcgtcag tcttcccggc cgcgacatcg ccgtcggaca
      961 gcgcggcggc cgccgcatcg tcagcgtcgt cgcgcagatg tgccagcgct tcgtggactg
     1021 gaatcagacc gccgccgaag ccgtcgccgc gccgcgtctc cacgtcgaac agcaggagcc
     1081 cggcgagttc agtgaatcgc tcccgcccgc catcgccgcg cgcctccgcg ccctcggaca
     1141 cgacttcacc gcggtaaagg cagtcggcgg ccacgccaac gcctgcgagc gtctgaacga
     1201 cggccgtctg cgcggcgcaa gcaacgtctg ggccgcgggg gtaagctgac gtgcgcctcg
     1261 acacgctgaa gtggccggaa atcgccgcgg tttcggaccg cgtcttcctc gtgccgctcg
     1321 gctccaccga gcagcacggc cgtcacctcc cgctgcagac cgacacggcc atcgtgagcg
     1381 ccatcgccga acgcgtcgaa cgcgcggcgc ccgatcgcat tgtcctgctg ccggcccttt
     1441 ggatcgggca ttccccacac cacgcggctt ttggctgcat cagcctcgac gtccgtcctt
     1501 atatggatct gattgcggga atctgccggt cgctcgtcgg catgggcgcg cgccgcatcg
     1561 tccttctgaa cggccatggc ggcaacgatg tcccgtgcaa ggcggcgatg cgcgaactga
     1621 agaccgagtt cgctacccgc gcagacctgt atatcgtcta cgccgcgtat tgggcgctcg
     1681 ccgcccgccg cttcagcgac attcgcaaat cgcccgtagg aggcatgaat cacgcctgcg
     1741 agatggagac atcggtgatg ttatctgtcg cccccggcag cgtcgatatg tctcgagccg
     1801 aagcgggggg gccttgtcac gagaccggat ggcgtcgttc ggacatgctc cagccccgtc
     1861 cttactacat cgtcaacgac ttcgatgaga tctccgaatc cggcacagtc ggactccccg
     1921 agtacgcctc cgccgcacaa ggcgagcaat tcctctccgc cgccgccgcg tcagtcgagg
     1981 agttactcgc agaagtgatg acctggaact atcagggata gcctggcgct gggtcgcatt
     2041 gcctgcaccg ccgctgtcgc ctactcagcc tttctgcgct tggctcagga tgtggttgat
     2101 cacggcgtcg aactcggcag tgggggagaa gtccacgtac tcggtgtcgt ccaacatctc
     2161 gggcgcatgt ccgggcgccc agtaaaatgc ctgacctgcg gcgtagtcct ggtggcctgc
     2221 tttagtatgc atgcgcagct tacccttcag aacatagccc cagtgcgggc agtgacagag
     2281 atcgttgggc agccctttca aagccggtcg caagtctgtt cccttactcg cccggacgaa
     2341 cgctacagac atgcttccga gactctgctt ccgaagctcg acgccttccc ccgcgatgac
     2401 caccggaacc tcttcccgcc tcaaacccag cattctgcct cccagtgaaa acgtggaatt
     2461 tatcgggtcc agtgtagcgc caccaccgaa gccgctcccg gtcgtccaag ttg
//
LOCUS       DATAIQ010000965         3334 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_213422, whole genome shotgun sequence.
ACCESSION   DATAIQ010000965 DATAIQ010000000
VERSION     DATAIQ010000965.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3334)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3334)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3334
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_213422"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..741)
                     /gene="mazG"
                     /locus_tag="VHN20_15840"
     CDS             complement(<1..741)
                     /gene="mazG"
                     /locus_tag="VHN20_15840"
                     /EC_number="3.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphate pyrophosphohydrolase"
                     /protein_id="HEX2727292.1"
                     /translation="MTPSRDIQRLLAIMAALRTPGSGCPWDLEQDFASIAPYTIEEAY
                     EVADAIERADVPDLKEELGDLLLQVVFHARMAEEGRLFDFGDVVEGITAKLVRRHPHV
                     FGEAGDLETDEVNRLWDAIKREEKAQRRQRLGDEAADSGLLAGVPLALPALTRAEKLT
                     RKAATVGFDWPDTAQVVAKIHEELEEVREAAATQSPDRVAEEVGDLLFAAVNVARRLG
                     ADPELELRRASQRFVHRVEEAERIAAAEG"
     gene            1331..2146
                     /locus_tag="VHN20_15845"
     CDS             1331..2146
                     /locus_tag="VHN20_15845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012334067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HEX2727293.1"
                     /translation="MKKILLSSVAFLGLSAGAFAADLPSRRAPAPAFAAVPVFTWTGF
                     YVGVNLGYGWGNNDDSNVVTVPAGTFGPASTIVTFHDNNENNGVIGGAQIGYNFQTGN
                     FVFGVEADIQAADLNDDGSVRTATAVGSLPPAGFVFARRSNGIDWFGTVRARAGVAFD
                     RTLVYATGGFAFGGGDNDNCGGIFAGGVVGCGGNDDTRSGWTVGGGVEYAFTNNLTLG
                     VEGLYVSLDNDNNRTTFVGRTAGGVAVVAPSTFSTGNDDLDFTIVRAKLNWKF"
     gene            complement(2434..>3334)
                     /locus_tag="VHN20_15850"
     CDS             complement(2434..>3334)
                     /locus_tag="VHN20_15850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012495963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="toprim domain-containing protein"
                     /protein_id="HEX2727294.1"
                     /translation="LATAEAQRIVEQAIKDPFDHWLAGNPAQANKLLDFVADRAEERI
                     RRRQEKDISRKTAARKLRLPGKLADCTNAAAAGSEIFIVEGDSAGGSAKQARDRATQA
                     ILPLRGKILNVASAGKDKLVQNQQLSDLVQALGCGTGAHYRDDDLRYEKVIIMTDADV
                     DGAHIASLLITFFYRQMPRLIDRGHLFLAVPPLYRLTQGTKTIYARDDAHKEKLLATG
                     FKGNGKVEVGRFKGLGEMLPGQLKETTMDPKKRTLLRVTVVPDERPETNDTVERLMGN
                     KPEARFVFISERAAFADEAQLDI"
BASE COUNT          509 a         1139 c         1104 g          582 t
ORIGIN      
        1 accctcggca gcggcgatcc gctcggcctc ctccacgcgg tggacgaacc gctgtgaagc
       61 ccggcgcagc tcgagctcgg ggtcggctcc gaggcgccgt gcgacgttga cggccgcgaa
      121 caggaggtcg ccgacctcct cggccacccg gtccggcgat tgcgtggcgg cggcctcgcg
      181 aacctcctcg agctcctcgt ggatcttggc gaccacctgg gccgtgtcgg gccagtcgaa
      241 gccgacggtc gccgccttcc gggtcagttt ttcggcgcgg gtcaaagccg gcagggcgag
      301 cggcacgccg gccagcaggc ccgaatcggc cgcctcgtcg ccgaggcgct ggcgccgctg
      361 cgccttctcc tcgcgcttga tcgcgtccca cagccggttg acctcgtcgg tctcgagatc
      421 gcccgcttcg ccgaagacgt gcgggtgccg gcgaaccagc ttggccgtga tgccctcaac
      481 cacgtcgccg aagtcgaaca gccggccctc ttccgccatg cgcgcatgga acacgacctg
      541 caggaggagg tcgccaagct cctccttgag atccgggacg tcggcgcgct cgatcgcatc
      601 ggcgacttcg taagcttctt caatggtata gggcgcgatc gacgcgaaat cctgctcgag
      661 atcccagggg cagccgctac ccggcgtccg gagcgcagcc atgatggcga gaagacgctg
      721 gatatcgcgc gagggcgtca tcacgaagct ccgacgagag gaaccgccgt cgaatagacg
      781 cgatcgggcg aggtggctac cgcccgcccg ggtgctgcgt cggtcccggt ccgtccatgc
      841 gattcaagca ggtcgccgga cgggttcgac gcgaatcccc cgcgcgacgc tttggcgtcc
      901 tcccagggcc tcgtgcaagg ccgaccctaa ccctgcagaa tcgcgcccgt ccccatcggc
      961 gtgaccgtcg gcgaatctcg cgacgattcg tcatcgccgg gtgggtgcgc gggcggtttg
     1021 ttgtcaaaag agcccggcgc cgatcgccgg ctcgagccgt tcgacgatgt ccagcccccg
     1081 tgccgccgcg gcccgcgacc gggaatcctc ttaaagcttc ggttgaccat gctgacggga
     1141 tgctgtcggg acgcgcgcgg ctgctcacgg tcgcgtctct cagggaacag ccgacatcgg
     1201 ggccggaaaa tgacgttccg cggaggccgc cagcgtcgct tcctgccgcg ttgttgcagg
     1261 aaaacgacag acgctgcacc cgcctttggg tatcaatggc ctcggaccac tacctggatt
     1321 ggacccaccc atgaaaaaga tacttctctc ctcagttgcc tttctcggat tgtccgccgg
     1381 cgcgttcgct gccgaccttc cttcgcgccg cgctccggct ccggcttttg ctgccgttcc
     1441 cgtcttcacc tggaccggct tctatgtcgg tgtgaacctc ggctacggct ggggcaacaa
     1501 cgacgacagc aacgtcgtca ccgtcccggc cggcaccttc ggtccggcct cgacgatcgt
     1561 cacgttccac gacaacaacg agaataacgg cgtcatcggc ggcgcccaga tcggctacaa
     1621 cttccagacc ggcaacttcg tgttcggcgt ggaagccgac atccaggctg ccgatctcaa
     1681 tgacgacggc tcggtccgca cggcgaccgc cgtcggctcg ctgccgccgg ccggcttcgt
     1741 gttcgcgcgc cgcagcaacg gcatcgattg gttcggcacc gtccgcgccc gcgccggcgt
     1801 ggccttcgac cgcaccctcg tctacgccac cggcggtttc gccttcggcg gcggcgacaa
     1861 cgacaactgc ggcggcatct tcgccggcgg cgtcgttggt tgcggcggca acgacgacac
     1921 ccgcagcggc tggaccgtcg gcggcggcgt cgaatacgcc ttcaccaaca acctgacgct
     1981 cggcgtcgaa ggcctctatg tgagcctcga caacgacaac aaccgcacca ccttcgtcgg
     2041 caggacggcc ggtggcgtgg cggtcgtcgc cccgagcacc ttcagcaccg gcaacgacga
     2101 tctcgacttc acgatcgtcc gcgccaagct gaactggaag ttctgatcac tcgtcccgag
     2161 tggatccgag agaggcccgg cggcaacgcc gggccttttc tttttgcgac ggccggccgg
     2221 gataatgccc cgcaactacc ccatcatccc tgacagagat gggatgtgat tatgatccgt
     2281 tcgggttgag tcgctccggg acaagcccgg ccatgacggc gtcagaacgg aatcaatccg
     2341 gattgagcca acgccgcttc ggccgaggtc agcgcgtgca ggaggcggat ctcgggcggc
     2401 gcggcttcgg ccgctcgccg ggctgatgcg gcctcagatg tcgagctggg cctcgtcggc
     2461 gaaggcggcg cgctcggaga tgaagacgaa gcgcgcttcc ggcttgttgc ccatgaggcg
     2521 ctcgaccgtg tcgttggtct cgggacgttc gtccggcacg acggtgacgc gcagaagcgt
     2581 gcgcttcttc gggtccatcg tggtttcctt gagctgcccc ggcagcatct cgccgagacc
     2641 cttgaagcgc ccgacctcga ccttgccgtt gcccttgaag ccggtcgcca gcagcttctc
     2701 cttgtgggca tcgtcgcggg catagatcgt cttggtgccc tgcgtcagcc gatagagcgg
     2761 cggcaccgcc aggaacaggt ggccgcgatc gatcagccgc ggcatctggc gatagaagaa
     2821 cgtgatcagg agcgaggcga tgtgggcgcc gtcgacgtcg gcgtcggtca tgatgatgac
     2881 cttctcgtag cgaaggtcgt cgtcgcgata atgggcgccg gtgccgcatc cgagcgcctg
     2941 cacgaggtcg gagagctgct gattctgcac cagcttgtcc ttgccggccg aggcgacgtt
     3001 gaggatcttc ccgcgtaacg gaagaatggc ttgggtcgcg cggtcgcgcg cctgcttggc
     3061 ggagccgccg gcgctgtcgc cctcgacgat gaagatttcc gatccggcag cggcggcatt
     3121 ggtgcagtcg gcgagcttgc cgggtagccg cagcttgcgg gccgcggtct tgcgcgaaat
     3181 gtccttctcc tgtcggcggc ggatgcgctc ctcggcgcga tcggccacga agtcgagcag
     3241 cttgttggcc tgcgccggat tgccggcgag ccagtggtcg aacggatcct tgatcgcctg
     3301 ctcgacgatg cgctgcgcct cggcggtggc gagc
//
LOCUS       DATAIQ010000966         3959 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_259185, whole genome shotgun sequence.
ACCESSION   DATAIQ010000966 DATAIQ010000000
VERSION     DATAIQ010000966.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3959)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3959)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3959
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_259185"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1312
                     /locus_tag="VHN20_15855"
     CDS             <1..1312
                     /locus_tag="VHN20_15855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX2727295.1"
                     /translation="FRTETARLGTEVSPKAADEQGNNEANRANRKAFQESIDALTKRN
                     MEAAHAVVERVDSLYASRLVLLGSLALGAVLTALMIGGLIGDRQIARPLQAVTAAIQK
                     LAGGDYNLPAMRETRDEIGAIWKAMRVFAAAIADAQRLREAQADNDRHMAERRRQEMT
                     ALAQSFEGSVGGLVQHLSAAAEELESTAKSMAATAEQTSQRSSSVAAASEETSANVQA
                     VAAATEEMAAPAGEIGTQISHTSRVAAQAVENVQRTNGRVQALAAGAQKIGDVVALIN
                     TIAGQTNLLALNATIEAARAGEAGRGFAVVAAEVKELANQTSRATEEIAAQIARIQED
                     TRNAVAAIQTVASIIGEMNAIATGVAAAMEEQGAATGEIARNVQQAAQGTQVVTASIM
                     DMKRGTTETGAAATQVLGDAQELARHSQDLNREVDAFLAGVKAA"
     gene            complement(1430..3325)
                     /gene="yidC"
                     /locus_tag="VHN20_15860"
     CDS             complement(1430..3325)
                     /gene="yidC"
                     /locus_tag="VHN20_15860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015931831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0032977 - membrane insertase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HEX2727296.1"
                     /translation="MRDDNKNLLLAIVLSGIVLIGWNYFYGVPQFKQQTQQTTTQPAQ
                     PPLPGQTSPSQAGGPAAPAPGTLPGGMPTPGGVAPAPGAAPAAPGTAAVETRESALAR
                     SPRVTVDTPSIRGSISLRGGRIDDVALKNYRETVDPRSPNIVLFAPSGSPNPYYAEFG
                     WVPATPGVPVPTADTVWTADAQAITADRPVTLTWDNGQGLVFRRQIALDPKFMFTVKD
                     SVENRGGAPVTLHPYGLVSRHGKPTTLGYYVLHEGMIGVLGDQGLQEYTYDSLEKESP
                     VPGQATRGKIWSSVTGGFVGVTDKYWAAAVVPEQAQPYQGSFTTRQEGQARIYQANML
                     GEARTLAPGASTESTQRLFAGAKEVNTVEAYKDDLNIKLFDRLIDWGWFWYFTKPLFQ
                     LLDFFFRLFGNFGVAILIVTVLIKIVFLPLANKSYVSMAKMKAVQPEMMAIRDRYGDD
                     KIKQQQALMELYKKEKINPVAGCWPVLIQIPVFFALYKVLFVTIEMRHAPFFGWIRDL
                     AAPDPTTIFNLFGLLPYDPTVVPVIGPFLHLGVWPLIMGVTMWLQMKMNPAPPDPVQA
                     QMFAWMPVIFTFMLGTFPAGLVIYWAWNNFLSIVQQYVIMKRNGVKVELWDNLRGMFA
                     KKAPAKG"
     gene            complement(3318..3770)
                     /gene="rnpA"
                     /locus_tag="VHN20_15865"
     CDS             complement(3318..3770)
                     /gene="rnpA"
                     /locus_tag="VHN20_15865"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004526 - ribonuclease P activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HEX2727297.1"
                     /translation="MRGARAHPIGRLTKRPQFVAAASGRRFHTERVTVQGRLREGDSA
                     ADEGLRFGFTITKRVGHATERNRIRRRLRAAAREATLAASPEQAAKPADIVVIGRREA
                     LAADFRLLVDDLARALAAVTRPKAARTDAARRSPTHSNGDDSRGPRHA"
     gene            complement(3785..3919)
                     /gene="rpmH"
                     /locus_tag="VHN20_15870"
     CDS             complement(3785..3919)
                     /gene="rpmH"
                     /locus_tag="VHN20_15870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010659431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HEX2727298.1"
                     /translation="MKRTYQPSKLVRKRRHGFRARMATKGGQKVIAARRARGRKRLSA
                     "
BASE COUNT          628 a         1313 c         1430 g          588 t
ORIGIN      
        1 gttccgcacg gagacggcgc ggctcggcac cgaggtgtcg ccgaaggccg ccgacgagca
       61 gggcaacaac gaggcaaacc gcgccaatcg caaggccttc caggagagca tcgacgcact
      121 gaccaagcgc aacatggaag ccgctcacgc cgtcgtggag cgcgtcgatt cgctgtacgc
      181 gtcccggctc gtgctgctcg gctcgctggc gctaggcgcc gtgctgaccg cgctcatgat
      241 cggtgggctg atcggggacc ggcagatcgc gcggccgctg caggccgtca ccgcggcgat
      301 ccagaaactc gccggtggcg actacaacct gccggccatg cgcgagaccc gcgatgagat
      361 cggcgccatc tggaaggcga tgcgcgtgtt cgcggcggcg atcgccgacg cgcagcgttt
      421 gcgcgaggcg caggcggaca acgacaggca catggcggag cggcgcaggc aggagatgac
      481 ggccctggcg cagagttttg agggcagcgt cggcggcctc gtccagcacc tgtcggccgc
      541 ggccgaggaa ctggaatcga ccgccaagtc catggcagcg accgccgagc agacgagcca
      601 gcgctcgagc agcgtcgccg ccgcctccga agaaacgtcc gccaacgtcc aggcggtcgc
      661 cgccgcgacc gaggagatgg cagcccccgc cggcgagatc ggcacgcaga tctcgcacac
      721 ctcgcgcgtc gccgcgcagg cggtcgagaa cgtgcagcgc acgaacggcc gcgtgcaagc
      781 gctggcggcc ggagcgcaga agatcggcga cgtggtggcg ctgatcaaca ccatcgccgg
      841 ccagaccaac ctcctggcgc tcaacgccac catcgaggcg gcgcgggccg gcgaagccgg
      901 ccgcggcttc gcggtcgtcg ccgccgaggt caaggagctc gccaaccaga cctcgcgcgc
      961 caccgaggag atcgccgcgc agatcgcgcg catccaggag gatacccgca acgcggtcgc
     1021 cgccatccag accgtcgcca gcatcatcgg cgagatgaac gccatcgcca cgggcgtggc
     1081 ggccgccatg gaggagcagg gcgcagcgac gggcgagatt gcgcgcaacg tgcagcaggc
     1141 cgcgcagggg actcaggtcg tgaccgccag catcatggat atgaagcgcg gcaccacgga
     1201 gaccggcgcc gcggccaccc aggtgctcgg cgacgcgcag gagttggcgc gccactcgca
     1261 ggacctcaac cgcgaggtcg acgccttcct ggccggggtc aaggctgcct gaccggacga
     1321 atggcgtgca aacgcgcgcg tccgccgctg aaaagaataa aagaataagg ggcgccaagg
     1381 cgcccctttt cgctattcgc cagacttcgc gcggcgagct gtaggccggc taccccttgg
     1441 ccggcgcctt cttggcgaac atgccgcgca ggttgtccca taactccacc ttcacgccgt
     1501 tgcgcttcat gatgacgtat tgctgcacga tcgacaggaa gttgttccac gcccagtaga
     1561 tgacgaggcc ggccgggaac gtgccgagca tgaaggtgaa gatcaccggc atccaggcga
     1621 acatctgcgc ctgcaccggg tcgggcggcg ccgggttcat cttcatctgc agccacatcg
     1681 tcacgcccat gatcagcggc cacacgccga gatgcaggaa cgggccgatc accggcacca
     1741 cggtcgggtc gtagggcagg agcccgaaca ggttgaagat ggtggtcggg tcgggcgcgg
     1801 cgaggtcgcg gatccagccg aagaacggcg cgtgccgcat ctcgatggtg acgaacagca
     1861 ccttgtagag cgcgaagaag acggggatct ggatcagcac cggccagcac ccggcgaccg
     1921 gattgatctt ctccttcttg tagagctcca tcagcgcctg ctgctgcttg atcttgtcgt
     1981 cgccgtagcg gtcgcggatg gccatcattt ccggctgcac cgccttcatc ttggccatcg
     2041 acacgtagct cttgttggcc agcggcagga acacgatctt gatcagcacc gtgacgatca
     2101 ggatggcgac gccgaaattg ccgaacaggc ggaagaagaa gtcgagcagc tggaacagcg
     2161 gcttggtgaa ataccagaac cagccccagt cgatcagccg gtcgaacagc ttgatgttca
     2221 gatcgtcctt gtaggcctcg acggtgttga cctccttggc gccggcgaac aggcgctgcg
     2281 tggactcggt gctggcgccg ggcgcgagcg tgcgcgcctc gccgagcatg ttggcctggt
     2341 agatccgcgc ctggccctcc tggcgcgtcg tgaagctgcc ctggtatggc tgcgcctgct
     2401 ccggcaccac ggcggccgcc cagtatttgt cggtgacgcc gacgaagccg ccggtgacgc
     2461 tgctccagat cttgccgcgc gtcgcctggc cgggaaccgg gctttccttc tcgaggctgt
     2521 cgtaagtgta ttcctgcagg ccctggtcgc cgagcacgcc gatcatgccc tcgtgcagca
     2581 cgtaatagcc gagggtggtc ggcttgccgt ggcgcgagac gaggccgtac ggatgcagcg
     2641 tgaccggcgc gccgccgcgg ttctcgaccg aatccttgac cgtgaacatg aatttcggat
     2701 cgagggcgat ctggcggcgg aacacgagcc cctggccgtt gtcccaggtc agcgtcaccg
     2761 ggcggtcggc ggtgatcgcc tgcgcgtcgg cggtccacac tgtgtccgcg gtcggcaccg
     2821 gcacccctgg agtcgccggc acccagccga actcggcgta ataggggttg gggctgcccg
     2881 acggcgcgaa cagcacgatg ttggggctgc gcgggtcgac ggtctcgcgg tagttcttca
     2941 gcgccacgtc gtcgatgcgc ccgccgcgca ggctgatcga gcctctgatc gagggcgtgt
     3001 cgacggtgac gcgcgggctc ctggcgagcg cgctctcgcg cgtctcgacg gccgccgtcc
     3061 ccggcgcggc cggcgcggcg ccgggtgcgg gggccacgcc gccgggcgtc ggcatgccgc
     3121 cgggcagcgt gccgggagcc ggggcggcgg gaccgccggc ctggctcggc gaggtctgtc
     3181 cgggcagcgg cggctgcgcc ggctgggtgg tggtctgctg cgtctgctgc ttgaactgcg
     3241 gcacgccgta aaaatagttc cagccgatca gcacgatgcc ggacaggacg atggcgagca
     3301 ggaggttctt gttgtcgtca cgcatggcgg ggtccgcgac tgtcgtcgcc gttggaatgg
     3361 gtgggggagc gccgggctgc gtcggtccgg gcggccttgg gccgcgtgac cgccgcgagg
     3421 gcgcgcgcaa gatcgtcgac caggagccgg aagtcggcgg cgagggcctc gcgccggccg
     3481 atcacgacga tgtcggcggg ttttgcggct tgctcgggtg aagcagccag tgtggcctcc
     3541 cgcgccgccg ccctgaggcg gcgcctgatg cggttgcgct cggtggcgtg gccgacgcgc
     3601 ttggtgatgg tgaagccgaa gcgcaggccc tcgtcggcag cgctgtcgcc ctcgcgcagc
     3661 cgtccctgga cggtcacgcg ctccgtatgg aagcggcggc ccgaagccgc cgcgacgaat
     3721 tgaggccttt tcgtcaggcg cccgatgggg tgtgcgcgcg cgccgcgcat cgggctggac
     3781 cggttcaggc ggacaggcgc ttgcggccgc gggcacggcg cgcggcgatg accttctggc
     3841 cgcccttcgt ggccatgcgt gcgcggaagc catggcggcg cttgcgcacg agtttgctcg
     3901 gttgatacgt cctcttcacg gcctcgtctc cggtcgaagg cgggcgtcgg ctcgagccg
//
LOCUS       DATAIQ010000967         2278 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_259646, whole genome shotgun sequence.
ACCESSION   DATAIQ010000967 DATAIQ010000000
VERSION     DATAIQ010000967.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2278)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2278)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2278
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_259646"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..582
                     /locus_tag="VHN20_15875"
     CDS             <1..582
                     /locus_tag="VHN20_15875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HEX2727299.1"
                     /translation="LLAADAFAMLDADVRGALAPAVKQAEAELGAATLVEAAPEGFEP
                     LYWAFRYIQGRQAWEIDGALIERFQPPLGPGVAERFAFSRSVTDAQVAEAEATRSRFR
                     QRFGELLGADGVLLLPTMPDIAPLLSESEAALDGYRNRALNLLSLAGLAGFPQVSIPV
                     ARRLAAPLALSLLGPPGSDLSLVRLAAKLAVAA"
     gene            complement(617..1552)
                     /locus_tag="VHN20_15880"
     CDS             complement(617..1552)
                     /locus_tag="VHN20_15880"
                     /inference="COORDINATES: protein motif:HMM:NF025123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter six-transmembrane
                     domain-containing protein"
                     /protein_id="HEX2727300.1"
                     /translation="MARRRPRVSTLSAVDAIRPFRWRISLTYGLTFVEDLLELAYPWA
                     TGLAIDGLLAQDYWMTAPIIVAWTLRSAIGLFRQMYDTRLYTDVYNSIVGDTILRQRR
                     GGVKATSVAARSAMSRDFVTFFEKDVPVVVTSIIGIVGSAAILFYYDLIIGAVTASLF
                     IPVYIVNRGYMRRSLMLNEGLNNQLEQEVHVIDQAEPDSIKHHFEQVRCWRVKLSDAE
                     AYNWTFIEVLSILVFIVVLARATYLPSTETGDVFAILVYVWRLMENLDTVPQIVQQLT
                     RLHDIRKRIEAGASIEAVGAEIEKSGEQVAESTRM"
     gene            1832..>2278
                     /locus_tag="VHN20_15885"
     CDS             1832..>2278
                     /locus_tag="VHN20_15885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HEX2727301.1"
                     /translation="MRNVPIRWRILAIAVLNSALAVFLLVRIMDGAQVVRDAWGELRQ
                     VRQSERLLASLDSEAGRLQSLIHRYFNQPDASVLAEIIRRREALISSLRVQAAIDPVV
                     NQVSRELIGITERFVTGFDDLRAVRSTVSRTYEADVLLPIRDMARLH"
BASE COUNT          360 a          771 c          754 g          393 t
ORIGIN      
        1 ctcctcgccg ccgacgcctt tgccatgctc gacgccgacg tgcgcggcgc cttggcgccc
       61 gccgtcaagc aagctgaggc tgagctaggg gccgccaccc tggtcgaggc ggcgcccgag
      121 gggttcgagc ccctctactg ggcgttccgc tacatccagg gacgtcaggc ctgggagatc
      181 gatggcgccc tgatcgagcg ctttcagccg ccgctcggcc cgggcgtcgc cgagcgcttc
      241 gccttcagca ggagcgtgac cgatgctcag gtcgccgaag ccgaggcgac ccgttcgcgc
      301 ttccggcagc gtttcgggga gcttctcggg gccgacggcg tgctgctgct cccgaccatg
      361 cccgacatcg ccccgctcct gagcgaaagc gaagcggcgc tggacggtta tcgcaaccgg
      421 gccctcaatc tgctcagtct tgcgggcctc gccggttttc cgcaggtctc catccccgtg
      481 gcgcggcgcc tcgcggcgcc gctcgcgctg tcgctgctgg gcccgcccgg gtccgacctg
      541 agccttgttc gcctggcggc aaagctcgcg gtggccgcct agttcctctc cgcgagcggg
      601 agagacgcgc ctcgcgctac atgcgggtcg attccgccac ctgctcgccc gacttctcga
      661 tttccgcgcc gaccgcttcg atcgatgctc ccgcctcgat gcgcttgcgg atatcgtgca
      721 ggcgcgtgag ctgctgcacg atctgcggga cggtgtcgag attctccatc agccgccaca
      781 cgtagacgag gatggcgaac acgtcgccgg tttccgtgct cggcagataa gtcgcgcgcg
      841 ccagcacgac gatgaaaacg aggatcgaca gcacctcgat gaacgtccag ttatacgctt
      901 cggcgtctga cagcttcacg cgccagcagc gcacctgctc gaaatggtgc ttgatcgaat
      961 ccggctcggc ctggtcgatg acgtgcacct cctgttccag ctgattgttc aatccctcgt
     1021 tgagcatcag ggaacggcgc atgtagccgc ggttcacaat atagaccggg atgaacagcg
     1081 aggccgtgac ggcgccgatg atcaggtcgt agtaaaacag gatcgccgcc gagccgacga
     1141 tgccgatgat cgaggtgacg acgacgggaa cgtctttttc gaagaaggtg acgaagtccc
     1201 gcgacatcgc cgaacgggcc gctacgctgg tcgctttgac gccgccgcgg cgctgccgca
     1261 ggatcgtgtc gcccacgatg gagttgtaga cgtcggtgta gagacgcgtg tcgtacatct
     1321 gccggaacag tccgatcgcc gatcgcagcg tccacgcgac gatgatcggg gccgtcatcc
     1381 agtagtcctg cgccagcagc ccgtcgatcg cgagccccgt ggcccaggga tacgcgagct
     1441 ccagaaggtc ctcgacgaag gtgaggccgt aggtcagcga gatccgccag cggaaaggcc
     1501 ggatcgcatc gaccgcggaa agggtgctga cacgggggcg gcggcgggcc atggttaaca
     1561 ggggcgaaac gggatgacgg aatccgggcc ggcgggctgg cccggacgta ttaagctaat
     1621 acgcccccac aggcttggcg gttccgtagg gcccgcaggc ggcgatccgg ccatttcttg
     1681 tcgtgggaag gaatgctatc ctcggccgca tcatgccccg gcaggccccg tcacgctaga
     1741 tgggcagcga gctaatcccc tggcagtcgc gtcgctcatg accccagacc ccgtttcgcg
     1801 cacctggatg cctcgttggc tggtgcgacg cgtgcgcaat gtgcccatcc gctggcgcat
     1861 cctcgcgatc gccgtgctca actcggccct cgccgtgttt ctgctggtgc gcatcatgga
     1921 cggcgcgcag gttgttcgcg atgcgtgggg cgagctgcgg caggtgcgcc agtcggagcg
     1981 gctcctcgct tccctggaca gcgaggcggg gcggctgcag agcctgatcc accgctactt
     2041 caaccagccc gatgccagcg tgctcgcgga gatcatccgg cggcgcgagg cgctgatcag
     2101 cagcctcagg gtccaggccg cgatcgaccc cgtggtcaat caggtgtcgc gcgaactgat
     2161 cggcattacc gagcgcttcg tcaccggctt cgacgatctg cgcgccgtgc gctcgaccgt
     2221 ctcccgcacc tacgaggccg acgtcctgct gcccatcagg gacatggcgc gcctgcac
//
LOCUS       DATAIQ010000968         1990 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_351618, whole genome shotgun sequence.
ACCESSION   DATAIQ010000968 DATAIQ010000000
VERSION     DATAIQ010000968.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1990)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1990)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1990
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_351618"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..151
                     /locus_tag="VHN20_15890"
     CDS             <1..151
                     /locus_tag="VHN20_15890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015928490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MucR family transcriptional regulator"
                     /protein_id="HEX2727302.1"
                     /translation="TPDDYRRKWGLAADYPMVAPNYAEQRRTLAKSIGLGTKRRKGGR
                     KAAAK"
     gene            316..750
                     /locus_tag="VHN20_15895"
     CDS             316..750
                     /locus_tag="VHN20_15895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007756061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fur family transcriptional regulator"
                     /protein_id="HEX2727303.1"
                     /translation="MHRTIDIEQLCADKGLRITDQRRVIAKVLAESEDHPDVETLHAR
                     AAAVDPHISIATVYRTVRLFEEAGILERHEFGDGRSRYEAASETHHDHLIDVETGNVI
                     EFVDEELEELQRRIAERLGFRLVDHRMELYGVARNRERDRQG"
     gene            710..1495
                     /locus_tag="VHN20_15900"
     CDS             710..1495
                     /locus_tag="VHN20_15900"
                     /inference="COORDINATES: protein motif:HMM:NF013702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HEX2727304.1"
                     /translation="MASPVTANATARADAPSAHWRAALRLAAIAGWLLICLVPHYLSK
                     LTGRSHWPRRFLSGTARLAGADVRLEGCRPGAGELLIANHVSWLDIPVLAGATGCAFV
                     SKAEVRGHPFLKWIADQNHTLYVDRSQRRDIQAQAAMVRNGLSRGQPLAVFPEGTVGD
                     GGRLLPFKPALLAAVTPPPDGATVRPVAIDYQGTATMFAWRPGEHGVANFFRVLGRKG
                     RIPVTVRMLDVLPPHADRKTLARTAHDAIAIALAPSGIAPAAL"
     gene            1509..>1990
                     /locus_tag="VHN20_15905"
     CDS             1509..>1990
                     /locus_tag="VHN20_15905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020180823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HEX2727305.1"
                     /translation="MTALPKTFRVKSFGCQMNAYDGERMAELLGAQGMRPAGDGEDAE
                     LVVLNTCHIREKAAEKAYSDIGRLKREDGTRPMVALAGCVAQAEGAEAKARSAMIDLV
                     VGPQAYHRLPQMLAEAAAGARPVDTDMPVVPKFDALPARCRSGPSAFLTVQEGCDKFC
                     T"
BASE COUNT          316 a          714 c          657 g          303 t
ORIGIN      
        1 gacccccgac gactatcgcc gcaaatgggg tcttgccgcc gactacccga tggtcgcgcc
       61 caattacgcc gagcagcggc ggaccctggc aaagtcgatc gggctgggca ccaagcgccg
      121 caagggcgga aggaaagcag cggcgaagta ggcgagtctc gtcagtcgcg cgaggcgtca
      181 cgggagtaaa tcccgtgacg tcggtcgtgt ccgctacgcg gcaggccgtt cggcgcgcac
      241 ggtctctcgg ccaaactgcg ttcgcttcgc tccactccgg ttgccctcgg cagtgacgct
      301 cactatcgtt cgcccatgca tcgtaccatc gacatcgagc agctgtgtgc cgacaagggc
      361 ctcaggatca ccgaccagcg gcgggtgatc gcgaaggtgc tggctgaaag cgaggaccac
      421 cccgacgtcg agactctcca cgcccgcgcc gcggcggtcg atccgcatat ctcgatcgcc
      481 accgtctacc gcaccgttcg gctgttcgag gaagccggga tcctcgagcg gcacgagttc
      541 ggcgacggcc gctcgcgcta cgaagcggcg tcggagacgc accacgacca cctgatcgac
      601 gtcgagaccg gaaacgtcat cgagttcgtc gacgaggagc tggaggagct gcagcggcgc
      661 atcgccgaac ggctcggctt ccgcctggtc gaccatcgca tggagcttta tggcgtcgcc
      721 cgtaaccgcg aacgcgaccg ccagggctga cgccccctcg gcgcactggc gcgccgccct
      781 cagacttgcc gctatcgccg gctggctgct gatttgcctc gtcccgcatt acctatcgaa
      841 gcttaccggg cgctcgcact ggccgcgccg gttcctctcc ggcacggccc ggctggccgg
      901 cgccgatgtc cgcctcgagg ggtgccgtcc gggcgccggc gaattgctga tcgccaatca
      961 tgtcagctgg ctcgatatcc cggtgctggc cggcgcgacc ggctgcgcgt tcgtctccaa
     1021 ggcggaggtg cgcggccacc cgttcctcaa gtggatcgcc gaccagaacc acacgctcta
     1081 cgtcgaccgc tcgcagcgcc gcgacatcca ggcccaggcg gcgatggtcc gcaatggcct
     1141 ctcccgcggc cagccgctgg cggtgttccc agaagggacg gtcggggatg gcggtcggct
     1201 gctgccgttc aagccggcgt tgctcgccgc ggtcactccg ccgcccgacg gcgcgacggt
     1261 ccgcccggtg gcgatcgact atcaaggcac ggcaaccatg ttcgcgtggc ggccgggcga
     1321 gcatggggtc gccaactttt tccgggtgct cggccgcaag ggtcggatcc cggtgacggt
     1381 gcgcatgctc gacgtgcttc ccccacacgc cgaccgtaag acactggcgc ggaccgcgca
     1441 cgatgcgatc gccattgccc tggcgccttc cggaatcgcg ccggctgcct tataggcccg
     1501 ccgcgaccat gaccgcactt cccaagacat tccgggtcaa gagcttcggc tgccagatga
     1561 acgcctatga cggcgagcgc atggccgagc tgcttggcgc ccagggcatg cgccccgccg
     1621 gcgacggcga ggacgccgag ctggtcgtgc tcaacacctg ccacattcgc gaaaaagcgg
     1681 ccgaaaaggc ctattcggac atcggccgcc tcaagcgcga ggatggcacc cggccgatgg
     1741 tggcgctcgc cggctgcgtc gcccaggccg agggcgccga ggccaaggcg cgctcggcaa
     1801 tgatcgacct cgtcgtcggc ccgcaggctt atcaccggct gccgcaaatg ctcgccgagg
     1861 ccgctgccgg cgcccgccca gtggacaccg acatgccggt ggtgcccaag ttcgacgcgc
     1921 ttccggcacg gtgcaggagc ggcccatcgg ccttcctcac cgtccaggaa ggctgcgaca
     1981 agttctgcac
//
LOCUS       DATAIQ010000969         4918 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_259665, whole genome shotgun sequence.
ACCESSION   DATAIQ010000969 DATAIQ010000000
VERSION     DATAIQ010000969.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4918)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4918)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4918
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_259665"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..646)
                     /locus_tag="VHN20_15910"
     CDS             complement(<1..646)
                     /locus_tag="VHN20_15910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-glutamate dehydrogenase"
                     /protein_id="HEX2727306.1"
                     /translation="MSSERAGIAARLSTPTTAPGDDGRIGTAAVLVDRLFGRVPAEDL
                     AAYSAATLADLAASTLEHLRGPFDKGLPDIRFVDREIERNGRQRDVTIVKIVNDNMPF
                     LLDSTLGEIVEQGYEPKFVAHPIVAVERNAAGELVRLVGEATALGPGEGKRESVIHIH
                     LDRIDDEGARARLDQGLRQVHADVAVAVHDWDAMRQAVAATIAQYQTNPPPLPAD"
     gene            1057..1431
                     /locus_tag="VHN20_15915"
     CDS             1057..1431
                     /locus_tag="VHN20_15915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012333452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2794 domain-containing protein"
                     /protein_id="HEX2727307.1"
                     /translation="MSEGEVAEPLRGGLTPVVPFPAPAPRQISFNRAELREILDLYGR
                     KVAEGEWRDYAIDFLRDKAVFSIFRRASEMPLYRIEKDPKLARRQGAYAIVAASGFIL
                     KRGHDLARVLRVLDRPLQVVTN"
     gene            complement(1421..1954)
                     /locus_tag="VHN20_15920"
     CDS             complement(1421..1954)
                     /locus_tag="VHN20_15920"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014490630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX2727308.1"
                     /translation="MNLVIRPSVDADLPAITTIYAHAVRTGTASFELEPPSLEEMLTR
                     HDALTGGGYPYLVAVRDGALVGYAYAGAYRTRPAYRSTVEDSIYVAAPAQGRGVGGAL
                     LDALIRDSAARGFRQMIAVIGDSASKGSIRLHESLGFRHVGTLADVGYKHGRWLDTVL
                     MQRELGAGAAEPPQISS"
     gene            complement(2042..2806)
                     /locus_tag="VHN20_15925"
     CDS             complement(2042..2806)
                     /locus_tag="VHN20_15925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
                     /protein_id="HEX2727309.1"
                     /translation="MQPYEQNRYAWGTTATRSQVEVDQGLRAFMLGVYNHMTLGLAIS
                     GLVALGTNMMAVTQAASGRMALTPFGQLLYTSPLKWVVMLAPLAFVFFFSFRMDRMSA
                     ATARTVFLLFAAVMGLSLSTLFLVFKLGSIVQVFFITAATFGALSLWGYTTTRSLSGM
                     GSFLLMGLIGIVIASLVNIFLGSPGLQFAISVLGVLIFAGLTAYDTQKLKEMYVYGDY
                     DGEAAAKASVFGALTLYLDFINMFQFLLSLFGNRNE"
     gene            complement(3025..>4918)
                     /locus_tag="VHN20_15930"
     CDS             complement(3025..>4918)
                     /locus_tag="VHN20_15930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEX2727310.1"
                     /translation="GTVSSDADLERVAAAANKAFPEAGWEIRSRVNADPRFARNIERF
                     TQFLTLVGLTALLVGGVGVANAVRGFVDRKRDSVATLKSLGAPGSQVVAVYLMQVMVI
                     ALVGIAIGLAVGAALPFILARSLGDLLPLPIEPSLAATELGVALFYGVLTALTFAIAP
                     LGRAHDVPVSGLFRDVVEPERRWPRKRYLILLAASVLGLVALAVLAAYDRRIAVIFVG
                     ASASAFALLRLVAAGVMAAARRMPRPRRATARLALANLHRPGALTPSLVLSLGLGITL
                     LVTLALIDANLTRQLTRTLPANAPSFFFLDIANAEAPRFDAFLAAEAPGATAERVPMM
                     RGRLVSLKGVPVDQIKAQEQVAWVLDGDRGITYAAQVPEGSQMAAGEWWPADYRGRPL
                     VSFESEVAAGLGLDVGDEITVNVLGRNITATIANLRQVEWRTLGINFVMVFSPNTFAG
                     APHTHLATVTFPNGADPARDAALLRATTKAFPGVTSLRVKDALDAVNAVVSQLVMAIR
                     GASSIALTASLLVLAGALAAGHRARLYDAVVLKTLGATRARLVGAYAIEYGALGLATA
                     IFGLIAGVIAAWLIVTRLMHMGFSLELFGPVAAASLAIVVTVGLGLLGTWRILSHKPA
                     AYLRNL"
BASE COUNT          869 a         1581 c         1726 g          742 t
ORIGIN      
        1 cgtcggccgg aagcggcggc gggttggtct ggtattgcgc gatggtcgcg gcaaccgcct
       61 ggcgcatcgc gtcccagtcg tggacggcga cggccacgtc ggcgtgcacc tggcgcagac
      121 cctggtcgag ccgcgcgcgc gcgccttcgt cgtcgatgcg gtcgaggtgg atgtgaatga
      181 cgctttcgcg cttgccctcg cccggcccga gggccgtcgc ctccccgaca agacggacca
      241 gctcgccggc ggcattgcgc tcgaccgcga cgatcggatg cgcaacgaat ttcggctcgt
      301 agccctgctc gacgatctcg cccagcgtcg agtcgagcag gaagggcata ttgtcgttga
      361 cgatcttgac aatcgtgacg tcgcgctgac gtccgttgcg ctcgatctcg cggtcgacga
      421 aacggatgtc gggcaggccc ttatcgaacg gcccgcgcag gtgctcgagc gtgctggccg
      481 cgaggtcggc gagggtcgca gcagaatagg cggcaaggtc ttcggccgga acccgcccga
      541 acagcctgtc gaccagcact gccgccgtcc cgattcggcc gtcatcgccc ggagccgtag
      601 tcggcgtgct caggcgggcg gcgatgcccg cgcgttccga actcatgcgt cctccccgcg
      661 cggccagcaa cgacgacgcc ccggcgtctc gtcggtcgcg gccctgcgaa tattacgcgc
      721 aatgggcgtg atgcggaaaa caaaaaagcc gccatgcggc ggcttcaatt ggggcgcctg
      781 gttggcgcct tgccttcgac gaaggtggcc cggctatccc aaatccccgg ggggctgggg
      841 ggctgacgta tccggcgaaa cgggaagccg ggccgtcgag gctacgatcc gaccatcgcc
      901 gtccagtggg gccggcgcac ggcgccacta gggcagaaat aaggtgtgct taacgaacgc
      961 gtgagcttct gcgcggctat cgtggcttgc gtcggcgtcg tcgagccccc atcatgtcgg
     1021 acgtgctttg gcgaggtgcc atgaaccgga ggagcgatga gcgaaggtga ggtcgcggag
     1081 ccgttgcgcg gtgggttgac gcctgtagtg ccgttcccag cccccgcgcc gagacaaatc
     1141 tccttcaacc gcgcagagtt gcgcgagatt ctcgacctct acggacgcaa ggtggcagaa
     1201 ggcgaatggc gcgattacgc catcgacttc ctgcgcgaca aggcggtgtt ctcgatcttc
     1261 cgccgcgcct cggaaatgcc gctctaccgc atcgaaaaag atccgaagct ggcccgtcgg
     1321 caaggcgcct atgcgatcgt tgccgcatcc ggcttcattc tcaaacgcgg gcacgacctc
     1381 gcccgggtgc tacgcgtgct cgacaggccc ctgcaggtgg tcacgaactg atctgcggcg
     1441 gttcggcggc tccggcgccg agttcgcgct gcatcagcac ggtgtcgagc cagcgcccat
     1501 gcttgtaccc gacatcggcc agcgtgccga cgtggcggaa gccgaggctc tcgtgcagcc
     1561 tgatggagcc tttcgacgcg ctgtccccaa tgaccgcgat catctgccgg aagccgcgtg
     1621 cggcgctgtc gcggatcagt gcatcgagga gcgctccgcc gacgccccgt ccctgggccg
     1681 gggcggccac gtaaatcgag tcctcgaccg tcgagcgata ggcggggcgc gtgcgatagg
     1741 cgccggcata ggcgtagccg acgagcgcgc cgtcccgcac ggcaacaaga taagggtagc
     1801 cgccgccggt cagcgcgtcg tgtcgcgtca gcatctcctc gagggatggc ggttccagct
     1861 cgaacgaggc ggtgccggtg cgcacggcat gggcgtagat tgtggtgatg gcgggcaggt
     1921 cggcgtcgac cgatgggcgg atcacgaggt tcatgctgcg cggccttagg ccaggatccg
     1981 gcaaagaaaa agccccggcg gaacgccggg gcttgtctct cgaggtgctg ccttgccctg
     2041 cttactcgtt gcgattgccg aacagcgaga gcaggaactg gaacatgttg atgaagtcga
     2101 ggtagagcgt cagggcgccg aatacggacg ccttggcggc cgcttcgccg tcgtagtcgc
     2161 cgtagacgta catctccttg agcttctgcg tgtcataggc ggtcagaccc gcgaagatca
     2221 ggacgccgag aacggaaatc gcgaactgca gccccggcga tccgaggaag atgttgacca
     2281 gcgaggcaat gacgatcccg atcaggccca tcagcaggaa cgagcccatg ccggacaggc
     2341 tgcgggtggt cgtatagccc cacaggctca gggcgccgaa cgtcgccgcc gtgatgaaga
     2401 agacctggac gatgctgccc agcttgaaca ccaggaacag cgtcgacagg gacaggccca
     2461 tgacggctgc aaaaagtaag aacaccgtgc gcgccgtggc cgccgacatc cggtccatcc
     2521 ggaacgagaa gaagaacacg aaggccagcg gggcgagcat aaccacccat ttcagggggc
     2581 tcgtgtagag gagttgcccg aacggcgtca gtgccatccg tccggaagcg gcttgcgtca
     2641 cagccatcat gttggtgccg agggcaacca gtcccgagat cgcaagaccc agggtcatgt
     2701 ggttgtagac gccgagcatg aaggcacgca ggccctgatc gacctcgacc tgagatcggg
     2761 tggccgtcgt gccccaggcg taacgattct gctcatacgg ttgcatggga gtctctctcg
     2821 atggctctca gcgtggttgt tccgctcgag gggtcacgcg accctcgttc gccgactatc
     2881 ggcatcggcc aataatatgt gattttccag gtttgcgcac aaggggcggc cacgcttgac
     2941 ccggtccccg caggggcagt tggccgtccg ctcccgtcgg ctggttaacc aattctgccg
     3001 gaacgcggaa ttcggcccgc ggtgttaaag attgcgcaga taggcggccg gtttgtggct
     3061 caggatgcgc caggttccca gcaggccgag gccgaccgtg accacgatcg ccaggctcgc
     3121 cgccgcgacc gggccgaaca gctccaggct gaagcccata tgcatcagcc gggtcacgat
     3181 cagccaggcg gcgatgactc cggcgatcag cccgaaaatc gcggttgcca gcccgagcgc
     3241 gccgtattcg atcgcatagg cgccgacgag ccgggcgcgc gtggcgccga gcgtcttgag
     3301 caccaccgcg tcatagaggc gcgcccggtg gccggctgcc agggcgccgg cgagcaccag
     3361 gaggctcgcc gtcagcgcga tcgagctagc gccgcggatc gccatcacga gctgcgagac
     3421 gacggcgttg accgcgtcga gcgcgtcctt gacgcgcagg ctggtcacgc ccgggaaagc
     3481 cttggtggtg gcgcgcagga gggcggcgtc gcgggccggg tcggcgccgt tcgggaaggt
     3541 gacggtggcg agatgcgtgt gcggcgcgcc cgcaaatgtg ttgggcgaga agaccatcac
     3601 gaaattgatg ccgagcgtgc gccattccac ctggcgcaga ttggcgatgg tggccgtgat
     3661 attgcggccg agcacgttga ccgtgatctc gtcgccgaca tcgagcccga ggcccgcggc
     3721 gacctcgctt tcgaacgaca cgagcggcct gccgcgataa tcggccggcc accattcgcc
     3781 ggccgccatc tgcgatcctt cgggaacctg cgccgcatag gtgatgccgc gatcgccgtc
     3841 gagcacccag gcgacctgct cctgggcttt gatctggtcg accggaacgc ccttcagcga
     3901 caccaggcgg ccgcgcatca tcggcacgcg ctcggccgtg gcgcccggcg cctccgcggc
     3961 aaggaacgca tcgaaacgcg gcgcctcggc attggcgatg tcgaggaaga aaaagctcgg
     4021 agcattggca ggcagcgttc gcgtcagctg ccgcgtcagg ttggcgtcga tcagcgccag
     4081 cgtgaccagg agcgtgatgc cgagtcccag cgacagaacg agcgagggcg tcagcgcccc
     4141 tggccggtgc aggttggcga gcgccagccg cgcggttgcg cggcgcgggc gtggcatgcg
     4201 ccgcgcggcg gccatcacgc cggcggcgac gagccgcagc agggcgaagg cgcttgccga
     4261 cgcgccgacg aagatgacgg caatgcgccg gtcataggcg gccagcaccg caagcgcgac
     4321 aagaccgagc accgatgcgg cgagaagaat caggtagcgc ttgcgcggcc aacgccgttc
     4381 aggctcgacg acgtcgcgga acaggcccga cacgggcacg tcgtgggccc gtcccaacgg
     4441 cgcgatcgcg aaggtgagcg ccgtcaacac gccgtagaaa agcgcgacgc caagctccgt
     4501 tgcagccagc gacggctcga tgggaagcgg cagaaggtcg ccgaggctgc gcgccaggat
     4561 gaaaggcagg gcggcgccga cggcaaggcc gatggcgatc ccgacgagcg cgatcaccat
     4621 cacctgcatc agatagactg cgacgacctg gctgccgggg gcgccgaggc tcttgagcgt
     4681 tgcgaccgaa tcgcgcttgc ggtcgacgaa gccgcgcacg gcattggcga cgccgacgcc
     4741 gccgacgaga agggccgtga ggccgacgag cgtcaggaac tgcgtgaagc gctcgatgtt
     4801 gcgggcaaag cgcggatcgg cattgacgcg ggagcggatt tcccagccgg cctcgggaaa
     4861 agccttgttc gcggcggcgg cgacccgctc gagatcggcg tcgctcgaca ccgtaccg
//
LOCUS       DATAIQ010000970         1793 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_351651, whole genome shotgun sequence.
ACCESSION   DATAIQ010000970 DATAIQ010000000
VERSION     DATAIQ010000970.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1793)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1793)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1793
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_351651"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..544)
                     /locus_tag="VHN20_15935"
     CDS             complement(<1..544)
                     /locus_tag="VHN20_15935"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HEX2727311.1"
                     /translation="MAGFALALALGAWAQTTSTEILGTVTDASGAAVPGAKVTLLRPA
                     TGEVRTTVTADDGNYSFPLIDVGEYVVRVEAKSFKTQEQKDIAVQLQQKARIDVRLEV
                     GLQTETVSVTAAAVSIKTEDATVGSNIDNKRVVELPLNGRNVATLAVLVPGVQYGVRM
                     GLDGSGGFPIPGNGVAISANG"
     gene            complement(665..1339)
                     /locus_tag="VHN20_15940"
     CDS             complement(665..1339)
                     /locus_tag="VHN20_15940"
                     /EC_number="2.1.1.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014494538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004719 - protein-L-isoaspartate
                     (D-aspartate) O-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate(D-aspartate)
                     O-methyltransferase"
                     /protein_id="HEX2727312.1"
                     /translation="MTVALAGLLFWLAADPSATRRAQMVREQMEERGVRDPGVLRVMR
                     AVPRHEFMPAAVRGQAYEDHPVGIGFGATISQPYIVAAMTELLGVSGSHKVLEIGTGS
                     GYQAAVLSHLAREVYSVEIVPELAASAGQTLERLGHRNVTVRQGDGYRGWPEQAPFDR
                     IILTAAPPEIPQLLIDQLKPGGRLVAPVGRYAQELVVIEKNADGRVRRRSVFPVMFVP
                     MVPARP"
     gene            complement(1344..1634)
                     /locus_tag="VHN20_15945"
     CDS             complement(1344..1634)
                     /locus_tag="VHN20_15945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727313.1"
                     /translation="MTSWPDAEPRHVAVEPPWYQKLATLIALIFCFEVGVFLAVFPWI
                     TDWRMNYLAVLPFWHSPYLRGAISGVGLLNIYIALAEAVRLKTALGEPKRLP"
BASE COUNT          320 a          630 c          558 g          285 t
ORIGIN      
        1 ggccgttggc gctgatggcg acgccgttgc cgggaatcgg gaacccaccc gagccgtcca
       61 gccccatgcg gacgccgtac tgtaccccag gcacgagcac ggcgagagtc gccacgttgc
      121 gcccgttgag cggcagctcc accacgcgtt tgttatcgat gttcgacccg accgtggcat
      181 cttcagtctt gatcgagacc gcggccgccg tgacgctcac cgtctcggtc tgaagcccga
      241 cctcgagacg cacgtcaata cgcgccttct gctgaagctg aacggcgatg tccttctgct
      301 cctgcgtctt gaagctcttc gcttcgacgc ggacaacgta ttcgccaaca tcgatcagcg
      361 ggaacgagta gttaccgtcg tcggcggtga cggtcgtgcg tacctcgccg gtcgcgggac
      421 gcagcagcgt caccttcgcc cccggcacgg ccgcgcctga ggcgtccgtc accgtcccca
      481 gaatctcggt cgaagtggtt tgcgcccatg ccccgagcgc tagagccagg gcgaacccgg
      541 ccacgccaaa actccgtcgt cccaatctcg gcagatgaga aagcacgtgc cctcctgaag
      601 tggtggcaag gtatcacgtg cgctcgccca tgtcaaacgg gtgggcacgc gcgggcaaac
      661 cgcgctacgg tctggcgggc accatcggga caaacatcac ggggaagacg ctgcggcggc
      721 gcacgcgtcc atcggcgttc ttctcgatca cgaccagctc ctgcgcgtac cgtccgacgg
      781 gcgcgaccag ccgtccaccg ggcttcaact ggtcgatcag aagctgcggg atctcgggcg
      841 gagcagccgt caggataatg cgatcgaacg gcgcctgctc cggccagccg cgatagccgt
      901 ccccctgccg cactgtcacg ttgcggtgtc ccagccgctc gagcgtctgt ccggcagacg
      961 ccgccagctc gggcacgatc tcgaccgagt agacctcgcg cgccaggtgc gacaggaccg
     1021 ccgcctgata ccccgagccg gtgccgatct cgagtacttt gtgcgagccg gagacgccca
     1081 ggagctccgt catcgccgcc acgatatacg gctgcgaaat ggtagctccg aaaccgatgc
     1141 cgaccggatg atcctcgtac gcctggccgc gcaccgccgc gggcatgaat tcatggcgcg
     1201 gcacggcgcg catcacacgc agcacgccgg gatcgcggac accgcgctct tccatctgtt
     1261 ctcgaaccat ctgagcccgc cgtgtggcgg aaggatccgc tgccagccag aacaacagac
     1321 cggccagtgc aaccgtcacc tcttcagggt aaccgcttcg gctccccgag cgcggttttc
     1381 agccgtacgg cctcggcgag cgcgatatag atattgagca ggccgacacc gctgatggcg
     1441 ccccgcagat acgggctgtg ccagaagggc agcaccgcga gatagttcat tcgccagtcg
     1501 gtgatccagg ggaaaactgc gagaaacacg ccgacttcga agcagaagat cagcgcaatc
     1561 agggtcgcga gcttctgata ccacggcggc tcgacggcca cgtggcgggg ctcggcgtcc
     1621 ggccaggacg tcatgcgccc gcaccggccg caaacggcag ccgctgctgc gccgtctcgt
     1681 acccgttcca gaccagccac ggacacgccg cgcgcaccgg ctcgaagctg aacctctgca
     1741 gcatggtcgg gccgtgccgc gctagcgcct cgatgtgttc atccgtgctg tat
//
LOCUS       DATAIQ010000971         2005 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_259869, whole genome shotgun sequence.
ACCESSION   DATAIQ010000971 DATAIQ010000000
VERSION     DATAIQ010000971.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2005)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2005)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2005
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_259869"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..197
                     /locus_tag="VHN20_15950"
     CDS             <1..197
                     /locus_tag="VHN20_15950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009758760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HEX2727314.1"
                     /translation="IKLDVPQCGYCQSGQVMSAIALLAENRKPSDTDIDTAMTGNLCR
                     CATYHRIRGAVKEAARTLGA"
     gene            199..>2005
                     /locus_tag="VHN20_15955"
     CDS             199..>2005
                     /locus_tag="VHN20_15955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003525767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEX2727315.1"
                     /translation="MLPGYIPKLTPAAAAPSRRGFLLAAAAVGGGLAVGFRAAEAAET
                     LPQAQAPFAHTQVNPFSAYLTITPDSLVVVHSAHMDMGQGPYHGLATLVAEELGADWA
                     QMRADGGWGNTQFYGNLAWGGAMQGTGGSTAIASSFDRYRQAGAAAREMLIAAASSAW
                     KVPKAEITVDKGFLVHASGRRAPFGEIVGQAAAVPIPSAVPLKEPKDWTFIGNPKLPR
                     IDSREKSTGREQFTIDVKLPGMLTAVMLHPPLFGATQKSFDASKAKAVKGFVEAVATP
                     RGVAVVAENMWAAMKAREAVTVEWDESKAEKRSTAELAATYRDLAARPGTVARNEGDV
                     DGAFAKAAKVIEATFEFPYLAHAALEPLNAVAARGADGFVEVWGGHQMPDLYQAAAAQ
                     VAGTTPDKVRLHVMKTGGSFGRRAVPDADVIVEAVAVAKALGWRAPVKLQWTREDDTR
                     AGRYRPMYVHALKAGIDADGKLVAWQNRIVGQSIVAGTPFAQGMVKNGIDVTSVEGAA
                     TIPYAIPNLRVELTTTEVGVPVLWWRAVGSTHTAYAVEAFLDEVAEAAGKDPVALRLD
                     LLKEHPRHAGALRLAAEKADWSRPLPAGRFRGVAVA"
BASE COUNT          313 a          727 c          699 g          266 t
ORIGIN      
        1 ggatcaagct cgacgtgccg caatgcggct attgccagtc cggccaggtc atgtcggcga
       61 tcgcgctcct ggccgagaac cgcaagccga gcgacaccga catcgacacg gctatgaccg
      121 gcaacctgtg ccgctgcgcc acctatcacc gcatccgcgg cgccgtgaag gaagccgcca
      181 gaacgctggg agcctgacat gctgcccgga tacatcccga agctcacgcc cgctgccgcc
      241 gccccctcgc gccgcggctt cctgctcgcc gcggctgccg tcggcggcgg ccttgccgtc
      301 ggcttccgcg ccgctgaggc cgccgagacg ctgccgcagg cgcaggcgcc gttcgcgcac
      361 acgcaggtca acccgttctc cgcctacctg accatcacgc ccgacagcct cgtcgtcgtg
      421 cattccgcgc atatggacat gggccagggg ccgtatcacg ggctggcgac gctggtcgcc
      481 gaagagctcg gcgccgactg ggcgcagatg cgcgccgacg gcggctgggg caacacccag
      541 ttctacggca acctcgcctg gggcggcgcc atgcagggca ccggcgggtc gaccgccatc
      601 gcgtcctcgt tcgaccgcta ccggcaggcc ggcgccgccg cccgcgagat gctgatcgcc
      661 gccgcctcga gcgcgtggaa ggtaccgaag gcggagatca ccgtcgacaa aggttttctc
      721 gtgcacgcgt cgggccggcg cgcgccgttc ggcgaaatcg tcggccaggc ggccgcggtg
      781 ccgatcccga gcgcggtgcc gctcaaggaa cccaaggact ggaccttcat cggcaacccg
      841 aagctgccgc gcatcgacag ccgcgaaaag tcgaccgggc gcgagcagtt cacgatcgac
      901 gtgaagctgc ccggcatgct gactgccgtg atgctccatc cgccgctctt cggcgcgacg
      961 caaaagtcgt tcgacgcgag caaggccaaa gccgtgaaag gcttcgtcga ggcggtcgcc
     1021 acgccgcgcg gcgtcgcggt cgtggccgag aacatgtggg ccgccatgaa ggcgcgcgag
     1081 gcggttaccg tcgaatggga tgaatcgaaa gccgagaagc gctcgaccgc cgagcttgcc
     1141 gcgacctatc gcgacctcgc ggcgcggccc ggcacggtgg cgcgcaacga gggcgacgtc
     1201 gacggcgcct tcgccaaggc cgccaaggtg atcgaggcga cgttcgagtt cccctatctc
     1261 gcgcatgcgg ccctcgagcc gctcaacgcc gtcgccgcgc gcggcgcgga cggcttcgtc
     1321 gaggtgtggg gcgggcacca gatgccggac ctctaccagg cggccgccgc gcaggtcgcc
     1381 ggcaccacgc ccgacaaggt gcggctgcac gtgatgaaga cgggcggcag ttttgggcgg
     1441 cgcgccgtcc ccgacgccga cgtgatcgtc gaagcggtcg cggtcgccaa ggcgctcggc
     1501 tggcgcgcgc cggtcaagct gcaatggacg cgcgaggacg acacccgcgc cggccgctac
     1561 cgcccgatgt atgtccacgc gttgaaagcc ggcatcgacg ccgacggaaa actcgtcgcc
     1621 tggcagaacc gcatcgtcgg ccagtcgatc gtcgcgggca ccccgttcgc ccagggcatg
     1681 gtcaagaacg gaatcgacgt cacgtcggtc gagggcgcgg cgacgatccc gtatgcgatc
     1741 ccgaacctgc gcgtcgagct gaccacgacc gaggtcggcg tgccggtgct gtggtggcgt
     1801 gccgtcggct cgacgcacac ggcctatgcg gtcgaagcct ttctggacga ggtcgccgag
     1861 gccgccggca aggacccggt cgccttgcgg ctcgatctcc tcaaggagca tccgcgccac
     1921 gccggcgcgc tgaggctcgc ggccgagaag gcggactgga gccgcccgct gccggccggc
     1981 cgcttccgcg gcgtcgccgt cgccg
//
LOCUS       DATAIQ010000972         2819 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_214164, whole genome shotgun sequence.
ACCESSION   DATAIQ010000972 DATAIQ010000000
VERSION     DATAIQ010000972.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2819)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2819)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2819
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_214164"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(199..1704)
                     /locus_tag="VHN20_15960"
     CDS             complement(199..1704)
                     /locus_tag="VHN20_15960"
                     /inference="COORDINATES: protein motif:HMM:NF018032.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine ammonia-lyase reactivating factor
                     EutA"
                     /protein_id="HEX2727316.1"
                     /translation="MPHDTDFDHEHEALSEADRLEMARYIWSQENVELRTIGIDIGSS
                     TSHLLFAKVVLQRQTQGLSSRFLVVSREVVWRSPIMLTPFLPDGTIDAHALDHFIHDA
                     YHAAGLRRSDIDSGAVILTGEAIKRKNARAIDELFAHEAGKFVCATAGHKLECTLAAH
                     GSGAVRLSKQRNTCLLHVDIGGGTTKLALVDRGEILGVSAFAVGGRLLASDGDAWTRI
                     DDSTRLVAEDLGIVADPATFADEEARRRIATRLAEVAADKILGAPADGLAQKLQLTAD
                     LPRTAVPTMLTFSGGVSEYIFGYEQQDYGDIARLLAGSLVEQLKQRTQLPLVDPGHRI
                     RATVIGASQFTVQVSGKTIYLPKPELLPVHNVPVVHIELGSAEQIESAHVTRAIRAKL
                     EQLDLSPESRMAIAFSWTGDPEYTQLREMSRGIRRAVAPERARDELLLLMIDGDIGRS
                     MGFMLDKAMRDSGKLISIDGVQLQELDYVDVGEMITPPGVVPVVIKSLLFS"
     gene            complement(1773..>2819)
                     /locus_tag="VHN20_15965"
     CDS             complement(1773..>2819)
                     /locus_tag="VHN20_15965"
                     /inference="COORDINATES: protein motif:HMM:NF039910.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEX2727317.1"
                     /translation="VEGNVVEMPSEPGESGFAQKVKHKAYPTREAGGFVWVYMGPAYQ
                     MPEFEAPPWAPTDETRVSIVKIDLPCNWAQIMEGQIDSAHSSSLHSSDMRPARVDTAK
                     AADTHWLRPSTDKSPKLQVQLTNYGFRYAAIRRPIANANTHSYVRITTYVAPFTALIP
                     PNTSYNVATVIVPKDDTSSYFHFIAWSDTGPGIEQEAWRKFCVAQVGIDLDANYRPMK
                     RNRDNNYLQDRNAMKLGNYTGIPGIPNQDIAMWETMGPIADRTSERLGASDIAVVQFR
                     RLMIDAARRLAAGAAPIGLVAPHIPQAKLRSYQGIVPKTENWRTLGASEDEVRILEGI
                     EEDETEREMARAAG"
BASE COUNT          423 a          892 c          989 g          515 t
ORIGIN      
        1 atggaccgcc ccacccttga cgccgtagcg cggccagtcg ccggtgtcga cggtgaacag
       61 gtcgatgccg taatcctcgg tgaccttgag cccctccttc ttgatccagt cgagataaga
      121 gtcgataccg tagcggggcg cttgctggtc gctcatcagg ggttctccag tctttcgaaa
      181 tcttcgggat gcgccgcctt acgagaacag cagcgacttg atgacgacgg ggacgacccc
      241 gggcggcgtg atcatctccc ctacgtcgac gtaatcgagc tcctggagct gcacgccgtc
      301 gatcgagatc agcttgccgg aatcgcgcat cgccttgtcc agcatgaaac ccatgctgcg
      361 gccgatatcg ccgtcgatca tcagaagcag aagctcgtcg cgcgcgcgct cgggggcgac
      421 ggcgcggcgg atgccgcgcg acatctcgcg gagctgcgtg tattcgggat cgcccgtcca
      481 gctgaacgcg atcgccatgc gcgactcggg gctgaggtcg agctgctcga gcttggcgcg
      541 gatggcgcgc gtcacatgcg cggactcgat ctgctcggcc gatccgagtt cgatgtgaac
      601 gaccggcacg ttgtgcacgg gcagcagctc gggcttcggc aggtagatcg tcttgccgct
      661 cacctgaacc gtgaactgcg acgcgccgat cacggtggcg cgaatgcggt ggcccgggtc
      721 gacgagcggc agctgggtgc gctgcttgag ctgctcgacg agcgagcccg caagcagccg
      781 ggcaatgtcg ccgtaatcct gctgctcgta accgaagatg tattccgaca cgccgcccga
      841 gaaggtgagc atggtcggta ccgccgtcct cggcaggtcg gcggtcagct gcagtttttg
      901 ggcaaggcca tccgccgggg cgcccaaaat cttgtcggcc gcgacctcgg cgaggcgcgt
      961 cgcaatgcgc cgccgcgcct cctcgtccgc gaaggtcgcc ggatcggcca cgatgccgag
     1021 gtcttccgcg acgaggcgcg tcgagtcgtc gatgcgcgtc caggcgtcgc cgtcgctcgc
     1081 gagcagacgc ccgccgaccg caaaggcgga cactccgagg atctcgccgc ggtcgacgag
     1141 ggcgagcttg gtggtgccgc cgccgatatc gacgtgaagc aggcaggtat tgcgctgctt
     1201 ggagagccgg actgcacccg agccgtgcgc cgcgagcgtg cattcgagct tgtgtccggc
     1261 ggtagcgcag acgaacttgc cggcctcatg cgcgaacagc tcgtcgatgg cgcgggcgtt
     1321 cttgcgcttg atcgcctcgc cggtgaggat caccgcgccg ctgtcgatgt cgctgcggcg
     1381 aagcccggcc gcgtgatagg catcgtggat gaaatgatcg agggcgtggg cgtcgatcgt
     1441 gccgtcgggc aggaacggcg tgagcatgat cggtgagcgc cacaccacct cgcggctcac
     1501 caccaggaag cggctcgaga ggccctgcgt ctggcgctgc agcacgacct tggcgaacaa
     1561 gaggtgcgag gtggagctgc cgatgtcgat gccgatcgtg cgcagctcga cattttcctg
     1621 gctccagatg tagcgggcca tctcgaggcg gtcggcctcg gacagagcct cgtgctcatg
     1681 gtcgaaatcg gtgtcgtggg gcatcggctc tcttcacgga acgcgcgagg cgcgctgggc
     1741 gtgatgctcc agcgcacgag tccgggccgt cgtcaacccg cggcgcgcgc catttcgcgc
     1801 tcagtctcat cctcctcgat gccttcgagg atgcggacct cgtcctcgga ggcgcccaac
     1861 gtgcgccagt tctcggtctt ggggacgatc ccctggtagg accgtagctt ggcctgcggg
     1921 atatggggcg cgaccaggcc aatgggcgcg gctcccgcgg cgagacggcg tgcggcgtcg
     1981 atcatcagcc gccggaactg cacgacggcg atgtcgctgg cgccgagccg ctcgctggtg
     2041 cggtcggcaa tcgggcccat ggtctcccac atggcgatgt cctggttcgg gatgcccggg
     2101 atgccggtgt agttcccgag cttcatcgcg ttgcggtcct gcaggtagtt gttgtcgcgg
     2161 ttgcgcttca tcggccggta gttggcgtcg aggtcgatgc cgacctgggc gacgcagaac
     2221 ttgcgccacg cttcctgctc gatgcccggg cccgtgtcgc tccaggcgat gaagtggaag
     2281 tagctgctgg tgtcgtcctt cggcacgatc acggtcgcca cgttgtacga cgtgttcggc
     2341 gggatcagtg ccgtgaaggg tgcgacgtag gtcgtgatgc gcacgtagct gtgcgtgttg
     2401 gcgttggcga tcggccgccg gatggcggcg tagcggaacc cgtaattggt gagctgcacc
     2461 tggagcttcg gcgacttgtc ggtcgagggc cgcagccaat gcgtgtcggc ggccttggcg
     2521 gtgtcgacgc gcgccgggcg catgtccgag gagtgcaggc tcgacgagtg cgccgagtcg
     2581 atctgcccct ccatgatctg cgcccagttg cagggcagat cgatcttgac gatgctcacc
     2641 ctggtttcgt cggtcggcgc ccagggcggc gcctcgaact ccggcatctg gtaggcgggg
     2701 cccatataga cccatacgaa gccgcccgcc tcccgggtcg gatacgcctt atgcttgacc
     2761 ttctgggcga agccgctttc gccgggctcg gagggcatct cgacgacgtt gccttcgac
//
LOCUS       DATAIQ010000973         2830 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_214323, whole genome shotgun sequence.
ACCESSION   DATAIQ010000973 DATAIQ010000000
VERSION     DATAIQ010000973.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2830)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2830)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2830
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_214323"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1119
                     /gene="urtC"
                     /locus_tag="VHN20_15970"
     CDS             <1..1119
                     /gene="urtC"
                     /locus_tag="VHN20_15970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011159206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0033221 - ATPase-coupled urea
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0015840 - urea transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urea ABC transporter permease subunit UrtC"
                     /protein_id="HEX2727318.1"
                     /translation="KGAVAFILVLVAIGLAVPLLNMLLPPSSAWHVPTYLVALWGKYV
                     CYAILALSIDLIWGYCGILSLGHGAFFALGGYAMGMYLMRQIGSRGVYGHPVLPDFMV
                     FLNWKELPWFWHGFDHFWFAALMVLVVPGLLAFVFGWFAFRSRVTGVYLSIITQAMTF
                     ALMLAFFRNDMGFGGNNGLTDFKTILGFPVQAQSTRAALFVLSALALAGGYVMCRFIV
                     TSKLGKVLVAIRDAESRTRFLGYRVEHYKLAVFTFSAVLAGIAGALYVPQVGIINPSE
                     FAPANSIETVIWVAVGGRGTLAGAALGAVVVNAGKTWFTGAIPELWLFALGGLFVFVT
                     LFLPKGILGTLTELYERVRPARLSRRSEPNGSALAAAE"
     gene            1123..1875
                     /gene="urtD"
                     /locus_tag="VHN20_15975"
     CDS             1123..1875
                     /gene="urtD"
                     /locus_tag="VHN20_15975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0033221 - ATPase-coupled urea
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0015840 - urea transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urea ABC transporter ATP-binding protein UrtD"
                     /protein_id="HEX2727319.1"
                     /translation="MTASLTPALLYLDNVTVSFDGFRALNALSLTIDPNEMRAIIGPN
                     GAGKTTMMDVITGKTRPTDGGALFEGVHDLTALDEAEIAQLGIGRKFQTPTVFDMHTV
                     EDNLVLALKADRRTFPTLFSRRTAAERERIDALLERVRLKDHRARTAAELSHGQKQWL
                     EIGMLLAQEPKLLLVDEPAAGMTDQETADTADLLREIAQDRSVIVVEHDMTFVRDLDV
                     KVTVLHEGSVLAEGSLDAVSANERVIEVYLGR"
     gene            1877..2572
                     /gene="urtE"
                     /locus_tag="VHN20_15980"
     CDS             1877..2572
                     /gene="urtE"
                     /locus_tag="VHN20_15980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020179169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0033221 - ATPase-coupled urea
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0015840 - urea transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urea ABC transporter ATP-binding subunit UrtE"
                     /protein_id="HEX2727320.1"
                     /translation="MLTVENLSLHYGASQALRGVSVDARLGEVTCVLGRNGVGKTSLL
                     RAIVGQRPISRGAILFDGRDITALKPYQRAALGIAYVPQGREIFPLLTVRENLETGYA
                     QLRRGQRHIPDEVFELFPVLKSMLGRRGGDLSGGQQQQLAIGRALVTRPRVLVLDEPT
                     EGIQPSIIKDIGRAIAYLRQKGEMAILLVEQYFEVARELADRFVVMERGEIVEAGDRA
                     ALEGDDVRQRIAF"
     gene            2547..>2830
                     /locus_tag="VHN20_15985"
     CDS             2547..>2830
                     /locus_tag="VHN20_15985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007559886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016151 - nickel cation binding [Evidence
                     IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urease accessory protein UreD"
                     /protein_id="HEX2727321.1"
                     /translation="MYASALRSEPVAPAAPQRQRALGRIALTVVRRGPVTRALRVAEA
                     GSLRLRLPRAGATLEAVLINTAGGVACGDRFAIEVDASAEAQVALTTPAA"
BASE COUNT          397 a          994 c          941 g          498 t
ORIGIN      
        1 aagggcgcgg tcgcgtttat cttggtgctg gtcgcgatcg gcctcgcggt accgttgctc
       61 aacatgctgc tgccgccttc ttcggcatgg catgtgccga cctatctcgt tgcgctgtgg
      121 ggcaagtacg tctgctacgc gatcctcgcg ctctcgatcg atctgatctg gggctattgc
      181 ggcatcctct cgctcggcca cggcgccttc ttcgcgctcg gcggctatgc catgggcatg
      241 tatctgatgc gccagatcgg atcgcgcggc gtctatggcc atccggtgct gcccgacttc
      301 atggtcttcc tgaactggaa ggagctgccg tggttctggc acggcttcga ccacttctgg
      361 ttcgcggccc tgatggtgct cgtcgtgccc gggctcctcg ccttcgtgtt cggctggttc
      421 gcgttccgct cgcgcgtcac cggcgtctac ctgtcgatca tcacgcaggc gatgaccttc
      481 gcgttgatgc tcgccttctt ccgcaacgac atgggctttg gcggcaacaa cggcctcacc
      541 gacttcaaga ccattctggg attccccgtg caggcccagt ccacccgggc ggcgctgttc
      601 gtcctctcgg cactcgcgct cgctggcgga tacgtcatgt gccgcttcat cgtgacgtcg
      661 aagctcggca aggtgctggt cgccatccgc gacgccgaaa gccgcacgcg cttcctcggc
      721 taccgggtcg agcattacaa gctcgccgtg ttcaccttct cggccgtgct ggccgggatc
      781 gccggcgcgc tctacgtgcc gcaggtcggc ataatcaacc cgagcgagtt cgcgccggcg
      841 aactcgatcg agaccgtgat ctgggtggca gtgggcgggc gcggcacgct cgcgggcgcc
      901 gcgctcgggg ccgtggtcgt gaacgccggc aagacctggt tcacgggcgc gatcccggag
      961 ctgtggctgt tcgccctcgg cgggctgttc gtgttcgtca cgctgttcct gcccaagggc
     1021 atcctcggca ccctgaccga gctgtatgag cgcgtccgac cggcgcggct ctcgcgccgc
     1081 tccgagccca acggctcggc cctggcggcc gcggagtagg ccatgaccgc gagcctgacc
     1141 cccgcccttc tctatctcga caacgtcacg gtgtcgttcg acggcttccg cgccctcaat
     1201 gccttgtcgc tgaccatcga tccgaacgag atgcgcgcca tcatcggccc gaacggggcc
     1261 ggcaagacga cgatgatgga cgtgatcacc ggcaagacgc gcccgaccga cggcggggcg
     1321 ctgttcgaag gcgtgcacga tctcaccgcc ctcgacgagg ccgagatcgc ccagctcggc
     1381 atcggccgga aattccagac gccgaccgtg ttcgacatgc acacggtcga ggacaacctg
     1441 gtcctcgccc tcaaggccga ccgccgcacc ttcccgacgc tgttctcgcg gcgcacggcc
     1501 gccgagcgcg agcgcatcga tgcgctgctc gagcgcgtgc gcctcaagga ccatcgcgcg
     1561 cgcacagctg ccgagctgtc gcacggccag aagcagtggc tcgagatcgg catgcttctg
     1621 gcgcaggagc caaagctcct gctcgtcgac gagccggccg ccggcatgac cgaccaggag
     1681 acggccgaca cggccgacct gctgcgcgag atcgcgcagg accgctcggt catcgtggtc
     1741 gagcacgaca tgaccttcgt gcgcgacctc gacgtgaagg tcaccgtgct gcacgagggc
     1801 tccgtgctgg ccgaaggctc gctcgacgcg gtcagcgcca acgagcgcgt catcgaagtc
     1861 tatctcggga ggtgagatgc tgaccgtcga gaatctctcg ctgcattacg gcgcgtcgca
     1921 ggcgctgcgc ggcgtctcgg tggacgccag actcggcgag gtcacctgcg tcctcggccg
     1981 caacggcgtc ggaaagacct ccctgctgcg cgccatcgtc ggccagcggc cgatctcgcg
     2041 tggcgccatc ctgttcgacg gccgcgacat cacggcgctc aagccatacc agcgcgccgc
     2101 cctcggcatc gcttacgtgc cgcaggggcg cgagatcttt ccgctgctga ccgtccggga
     2161 gaacctcgag accggctatg cgcagctgcg gcgcggccag cgccacatcc ccgacgaggt
     2221 gttcgagctg ttcccggtgc tgaagtcgat gctcgggcgg cgcggcgggg acctgtccgg
     2281 cggccagcag cagcagctcg ccatcggccg cgccctcgtc acgcgcccgc gcgtgctcgt
     2341 cctcgacgag ccgaccgagg gcatccagcc gtcgatcatc aaggatatcg gccgcgccat
     2401 cgcctatctg cgccagaagg gcgagatggc catcctgctc gtcgagcagt attttgaggt
     2461 cgcgcgcgag ctggccgatc gcttcgtcgt gatggagcgt ggcgaaatcg tcgaggccgg
     2521 ggatcgcgcc gccctcgagg gggacgatgt acgccagcgc attgcgttct gaaccggtcg
     2581 ctcccgccgc gccgcagcgc cagcgcgcgc tcggccgcat tgcgctcacc gttgtgcggc
     2641 gcggtcccgt aacgcgggct ctgcgcgtcg ccgaagcggg gtcgctgcgc ctgcgcctgc
     2701 cgcgggccgg cgcgacgctc gaggcggtgc tgatcaacac ggccggtggc gtcgcctgcg
     2761 gggaccgatt tgccatcgag gtcgatgcaa gtgcggaggc gcaggtggcg cttaccacgc
     2821 ctgcggctga
//
LOCUS       DATAIQ010000974         2634 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_352362, whole genome shotgun sequence.
ACCESSION   DATAIQ010000974 DATAIQ010000000
VERSION     DATAIQ010000974.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2634)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2634)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2634
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_352362"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..346)
                     /locus_tag="VHN20_15990"
     CDS             complement(<1..346)
                     /locus_tag="VHN20_15990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727322.1"
                     /translation="MKPHAILLRAPNELDSTAGRRLDQCGAPAILQRSDDDFVEAVLE
                     GLRSSAARNDLAATLAKRFDGVLKLFQPVQRQFHVAVLEAVCDAPGTPRIDPARVESA
                     GMVLRRLRADGMA"
     gene            complement(351..1037)
                     /locus_tag="VHN20_15995"
     CDS             complement(351..1037)
                     /locus_tag="VHN20_15995"
                     /inference="COORDINATES: protein motif:HMM:NF016595.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate assembly protein V"
                     /protein_id="HEX2727323.1"
                     /translation="MNLAAAFARPAGWLSTAHLAEVVSLDDPDSLNRVQVRLIAYAEA
                     DGQDLPLWARVVSPFAGSDRGAFFMPDVGDEVLVVFVQGDPRCPLVIGGVWNGANAAP
                     ASIDAGGNLVKRLRSKNGIQITLEDQQGQETLTLETPGGQAVTLKDGPGAVTIEDANG
                     NSVKLETSGITLQASGTVKVQAAKIDVSAGMVTVDAAMAKFSGVVKCEVLQSTSVVST
                     SYTPGAGNMW"
     gene            complement(1037..2125)
                     /locus_tag="VHN20_16000"
     CDS             complement(1037..2125)
                     /locus_tag="VHN20_16000"
                     /inference="COORDINATES: protein motif:HMM:NF017739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="contractile injection system protein, VgrG/Pvc8
                     family"
                     /protein_id="HEX2727324.1"
                     /translation="MAETSVSAAAVYRARPTLRLAGAEDERASELLVGMRLEESEGGM
                     SALELRFSNWASLTSGGAEYAFGAGARLRLGAEITVSAGDETQPREIFRGIITAVEGE
                     YATGKPPELTVLAEDALQRARMARRSRIHTDKSPADVARAIASDLGLRPVISGLAAPV
                     GMWAQLNESDLSFLRRLIGRFDGDLQIVGQEMHVAPRADIRRGAIDLELHGQLARASL
                     RVDLADQVTAITTRGWNATQGSAVSGSAGRLTHGGPGRGRDGAALLAELLQQRSEHLG
                     HVVVTTDAEARAVAEAAFDLRARRLVTLEGITEGNPQLRVGSHCTITGVDHRFENTYY
                     VVRVCHRYDLREGYRCEFSAECAYLGDD"
     gene            complement(2135..2299)
                     /locus_tag="VHN20_16005"
     CDS             complement(2135..2299)
                     /locus_tag="VHN20_16005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727325.1"
                     /translation="MPVQFEEINAEITDERRREPDEPPSRTPDPLEVAEQIRHELALI
                     EARRARLAAD"
     gene            complement(2318..>2634)
                     /locus_tag="VHN20_16010"
     CDS             complement(2318..>2634)
                     /locus_tag="VHN20_16010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727326.1"
                     /translation="GFGVGGISAGVGIAAGSGIATGDGAYVGAGSVARGAFNGLRAGG
                     AVTLPIPDPRRLIAEIPRVSVGAGAQFAPGGRVLSAPSGASLGANVGAGAGFSARLRF
                     GT"
BASE COUNT          370 a          923 c          936 g          405 t
ORIGIN      
        1 gggccatgcc gtcggcccgg agccggcgca gcaccatgcc ggcggactcg acccgggccg
       61 ggtcgatgcg cggcgtgccc ggcgcgtcgc acacggcttc gagcacggcg acgtggaact
      121 gcctctgcac gggctggaac agcttgagca cgccgtcgaa gcgcttcgcg agggtcgcgg
      181 caagatcgtt gcgcgcggcg ctgctgcgca gcccttcgag gacggcttcg acgaagtcgt
      241 cgtcgctgcg ctgcaggatg gccggcgcac cgcattggtc cagcctccgg ccggcggtgg
      301 aatccagttc gttcggagcg cgcagcagga tggcgtgcgg tttcatgtcg tcaccacatg
      361 ttgccggcgc ccggcgtgta gctggtcgac acgaccgagg tggactgcag cacctcgcac
      421 ttcacgacgc cggagaattt cgccatcgcc gcgtcgaccg tgaccatccc ggcgctgacg
      481 tcgatcttgg cagcctggac cttcacggtg ccgctcgcct gcagagtgat gccgctggtt
      541 tcgagcttca ccgagttgcc gttggcgtcc tcgatcgtga ccgccccagg gccatccttg
      601 agcgtgacgg cctggccgcc gggcgtctcg agcgtcaacg tctcctggcc ctgctggtcc
      661 tcgagcgtga tctggatgcc gttcttggag cgcaggcgct tcacgaggtt gccgccggcg
      721 tcgatcgaag cgggcgccgc gttggcgccg ttccacacgc cgccaatgac gagcggacac
      781 cgcgggtcgc cctgcacgaa gacgaccagc acctcgtcgc caacgtccgg catgaagaag
      841 gcgccgcggt cgctgcctgc gaaaggcgag accacgcgcg cccacaaggg caggtcctgt
      901 ccgtcggctt ccgcataagc gatcaggcgg acctggacgc ggttcaggct gtcgggatca
      961 tcgagcgaca cgacttccgc aaggtgagcc gtggacagcc agccggccgg acgagcgaag
     1021 gcggctgcga ggttcatcag tcgtccccca gataggcgca ttcggcgctg aactcgcagc
     1081 gatagccctc gcgcaaatcg tagcgatgac agacgcggac cacgtaatag gtgttctcga
     1141 aacggtgatc gacgccggtg atcgtgcagt gcgagccgac gcgcagttgc gggttgcctt
     1201 cggtgatccc ttcgagggtc acgagacgcc gggcgcgcag gtcgaacgca gcctcggcga
     1261 cggcgcgcgc ctcggcgtcg gttgtcacca cgacgtggcc gagatgttcg ctgcgttgct
     1321 ggagcaattc ggcgaggagc gcggcgccgt cgcggccgcg gcccggtccg ccatgagtga
     1381 ggcggcccgc gctgccgctc accgcgctcc cctgggtcgc gttccagcct cgggtggtga
     1441 tggccgtcac ctgatcggcg agatcgacgc ggagcgacgc ccgcgccagc tggccgtgca
     1501 gctcgagatc gatcgcgccg cggcggatgt cggcgcgcgg tgcgacgtgc atctcctgcc
     1561 cgacgatctg cagatcgccg tcgaaacgcc cgatcagccg gcgcaagaac gagagatcgc
     1621 tttcgttgag ctgcgcccac atgccgaccg gcgcggcgag gccggagatc accggcctga
     1681 gcccgaggtc ggacgcgatg gcgcgtgcca cgtcggccgg cgacttgtcg gtgtggatgc
     1741 ggctgcgccg ggccatgcgc gcccgttgca gggcgtcctc ggcgagcacg gtcagctccg
     1801 gcggcttgcc ggttgcgtat tcgccctcga cggccgtgat gatgccccgg aagatctcgc
     1861 gtggctgcgt ctcgtcgccg gcggagaccg tgatctcggc gccgagcctg agccgcgcgc
     1921 cggcgccgaa ggcgtattcg gcgccgccgc tggtcaggct cgcccagttc gagaagcgca
     1981 gctcgagcgc gctcatccca ccttcgcttt cctccaggcg catgccgacc agcagctcgg
     2041 aggcgcgctc gtcctcggcg cccgcaagac gcaaggttgg gcgggcgcgg tagacggcgg
     2101 cggcgctgac ggaggtctcg gccatggttc gccctcagtc tgcggcaagc cgtgcgcggc
     2161 gcgcttcgat cagcgccagc tcgtgccgga tctgctccgc cacctcgagc ggatccgggg
     2221 tcctcgacgg gggctcgtcg ggctcgcggc ggcgctcgtc ggtgatctcg gcgttgatct
     2281 cttcgaactg cacgggcatc gacacttctc cttgtcgtca ggtgccgaac ctgaggcggg
     2341 ccgagaatcc ggcgcccgct ccgacattgg cgccgaggct tgcgccggac ggcgccgaca
     2401 gcacgcgtcc gcctggcgcg aactgcgcgc ctgcgccgac gctgaccctg ggaatctccg
     2461 cgatcagccg ccgcggatcc gggatcggga gcgtcacggc gccgccggcg cgcagcccgt
     2521 tgaacgcccc ccgggcgacg ctgccggcgc cgacataggc gccgtcaccg gtcgcgatgc
     2581 ccgatccagc cgcgatgccc acgccggcgc tgatgccgcc aacaccgaaa ccgg
//
LOCUS       DATAIQ010000975         1518 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_260391, whole genome shotgun sequence.
ACCESSION   DATAIQ010000975 DATAIQ010000000
VERSION     DATAIQ010000975.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1518)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1518)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1518
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_260391"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1225)
                     /gene="chrA"
                     /locus_tag="VHN20_16015"
     CDS             complement(<1..1225)
                     /gene="chrA"
                     /locus_tag="VHN20_16015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015109 - chromate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015703 - chromate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromate efflux transporter"
                     /protein_id="HEX2727327.1"
                     /translation="MDASPPTSSATHVPAHGVSLGEALRVWLRVAALSFGGPAGQIAV
                     MHRILVEEKRWVSESRFLHALNYCMLLPGPEAQQLATYIGWLMHRTLGGIMAGGLFVL
                     PGIVAIMALSWIYALYGKVGVVAALFFGLKAAVLAIVLEAVVRIGRRALKNRVMVAIA
                     AAAFVAIFFFNVPFPIIILSAGVIGFFGGRAGLAVFEVGGGHAAAKAADEASLLGDEL
                     PTHARPTVAGSLRVSAVWLALWLVPVAVLIATLGAQNVFSQIAIFFSKMAMVTFGGAY
                     AVLAYVAQQAVEHYHWLEPGEMLDGLGMAETTPGPLIMVLQFVGFMAAFRDAGALSPL
                     LAGTLGGLLATWVTFTPCFLWIFLGAPFIERVRGNKALAGALSAITAAVVGVILNLAI
                     WFAIHTLFAEVRPLRG"
BASE COUNT          280 a          522 c          516 g          200 t
ORIGIN      
        1 cccctcgcag cggccgcacc tcggcgaaga gcgtgtggat ggcgaaccag atcgcgaggt
       61 tgaggatcac gccgacaacc gcggcggtga tcgccgacag cgcgccggcg agcgccttgt
      121 tgccgcgcac ccgttcgatg aacggcgcgc ccaggaagat ccacaggaag cacggcgtga
      181 acgtgaccca ggtggcgagc aggccgccga gggtgccggc gagcagcggg cttagtgcgc
      241 ccgcatcgcg gaaggccgcc atgaagccca cgaactggag caccatgatc aacggcccgg
      301 gcgtcgtctc ggccatgccg aggccgtcga gcatctcgcc gggctcgagc cagtggtaat
      361 gctcgaccgc ctgctgcgcc acgtaggcga gcaccgcgta ggcgcccccg aacgtgacca
      421 tcgccatctt ggagaagaag atggcgatct ggctgaacac gttttgcgcg ccgagcgtcg
      481 cgatcagcac cgccacaggc acgagccaca atgccagcca cacagccgaa accctcaggc
      541 tgccggcgac ggtcgggcgc gcatgcgtcg gcagctcgtc gccgaggagg ctggcctcgt
      601 ccgcagcctt ggctgcggca tggccgccgc cgacctcgaa cacggcgagc ccggcgcggc
      661 cgccgaagaa gccgatcaca ccggcgctca ggatgatgat cgggaacggc acgttgaaga
      721 agaagatcgc cacgaacgcc gccgccgcga tggcgaccat gacgcggttc ttgagcgccc
      781 gccgaccgat gcgcaccacc gcttcgagca cgatggcgag cacggcggcc ttcaagccga
      841 agaacagcgc cgcgacgacg ccgaccttgc cgtagagcgc gtagatccag ctcagcgcca
      901 tgatggcgac gatgccgggc agcacgaaca gcccgcccgc catgatgccg ccgagcgtgc
      961 ggtgcatgag ccagccgatg tacgtggcga gctgttgcgc ctccgggccc ggcagcagca
     1021 tgcagtaatt gagcgcatgc aggaaccggc tctcggacac ccagcgcttc tcctcgacga
     1081 ggatgcggtg catcaccgcg atctgcccgg ccggcccgcc gaagctcaac gccgccacgc
     1141 gcagccacac gcgcaaggct tcgccgagcg acacgccgtg cgcgggcaca tgggttgcgg
     1201 aagatgtcgg tggtgatgcg tccatgatcc cttccctcgg ccgagcggcc gccggtcagg
     1261 gcagagcttg gacgcaaggc gtctttgagg aaagcggggc gtctgccgaa agccccgcat
     1321 cgcaaggtta gcaaggtgcg atagccatca caaggctgcg ccgtttccga ggaacggcac
     1381 acccccgtgc acgggcgctg cacgtgtgta gcgcgacacc tgacctcttt acgcggtctg
     1441 cggttccgat tctcgtggaa ctgcgcccgc tgctgggtta ggggctctct gagccgccga
     1501 ccgcacgagg acgtgagt
//
LOCUS       DATAIQ010000976         1607 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_71089, whole genome shotgun sequence.
ACCESSION   DATAIQ010000976 DATAIQ010000000
VERSION     DATAIQ010000976.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1607)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1607)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1607
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_71089"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            514..1554
                     /locus_tag="VHN20_16020"
     CDS             514..1554
                     /locus_tag="VHN20_16020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016557623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter substrate-binding
                     protein"
                     /protein_id="HEX2727328.1"
                     /translation="MQRLRGAKSMSRISAAALLFAGAALLAPAPVAAQTQILNVSYDP
                     TRELYREINQAFAAEWKEKTGETVTVRASHGGSGAQARTVIDGIDAAVVTLALAADID
                     AIARVTKKLPADWQKRLPNNSSPYTSTIVFVVKKGNPKGVKDWDDLAKPGIQVITPNP
                     KTSGGARWNYLGAWGYALDKNGGDPAKAQEFVRAIYKNVPVLDTGARGSTTTFAQRAI
                     GDVLIAWENEAFLTLKEFGEDRYEVVVPSSSILAEPPIALVDGNVDAKGTRKVAQAYL
                     EFLYSPKAQAIIAKNFYRPVKPEHAAREDLERLPKLKLFTIDDVFGGWTKVQKEHFAD
                     GGVFDQIVKANR"
BASE COUNT          292 a          557 c          521 g          237 t
ORIGIN      
        1 ccctcgggcg cgcaagcgcg cgttgccgag atcgtcacgt atgacggcag cattcagcat
       61 gccgccgccg ggcaatcggt caccatcgtg ctcgccgagg atgtcgacgt ctcgcgcggc
      121 gacgtgatcg cctgcgatac cgcgccgccg ggctccgcga cgcagctgcg cgtgcggctg
      181 ttctggaccg gcgagcgcgc cttgcaggtc ggcgacgacc tgcagctcaa gctcgccacg
      241 acctccgccg ccgcccgcat cgaggcgatc cactaccgca tcgatcccga cactgccgct
      301 ccgcgagcgg ccgagagcct tgccgccaac gacatcgccg atgtgacgat cggcctcgac
      361 agggcaatcg ccttcgaccc gtaccaggcg agccgcgaca cgggcagctt catcctgatc
      421 gaccgggaaa gcttcgacac cgtcgcgctc ggcctggtgc tcgccgccgg cgagccggcg
      481 cgacgggaaa gtccggggcg catcacgagt ttcatgcaac gtttgcgagg agccaaatcc
      541 atgtcccgca tctcggccgc cgccctgctc tttgcaggcg ccgcgcttct ggcgcctgcg
      601 cctgtcgcgg cgcaaacgca gatcctgaac gtctcctacg atccgacgcg cgagctctat
      661 cgggagatca accaggcatt cgccgccgag tggaaggaga aaaccgggga gacggtgacg
      721 gtgcgcgcgt cgcatggcgg ttccggcgcg caggcgcgga ccgtgatcga cggcatcgat
      781 gccgcggtcg tcactctcgc gctcgcggcc gacatcgacg ccatcgcgcg ggtgacgaag
      841 aagctccccg ccgactggca aaagcgcctg cccaacaatt cctcgcccta cacatcgacg
      901 atcgtgttcg tggtgaagaa gggcaacccg aaaggggtga aggattggga tgatctcgcg
      961 aagccgggca tccaggtcat cacgccaaat ccgaagacgt ccggcggcgc gcgctggaac
     1021 tatcttggcg cctggggcta cgcgctcgac aagaatggcg gagacccggc caaggcgcag
     1081 gaattcgtgc gcgcgatcta caagaacgtg ccggtgctcg acaccggcgc gcgcgggtcg
     1141 acgacgacct tcgcccagcg tgccatcggc gacgtcctga tcgcctggga gaacgaggcc
     1201 ttcctcacgc tcaaggaatt cggcgaggac cgttacgagg tggtggtccc gtcgagctcg
     1261 atcctggccg agcctccgat cgccctcgtc gacggcaacg tcgacgccaa gggcacgcgc
     1321 aaggtggcgc aggcctatct cgagttcctc tacagcccga aggcgcaggc gatcatcgcc
     1381 aagaatttct atcgaccggt gaagcccgag cacgcggcca gagaagacct cgagcgtctg
     1441 ccgaagctca agctgttcac catcgacgac gtgttcggcg gctggaccaa ggtccagaag
     1501 gagcacttcg ccgacggcgg cgtattcgac cagatcgtca aggcgaaccg ctgatcgcac
     1561 atgggcgatg cgctgaccct tccggccgcg cggcacggcc gcgcacc
//
LOCUS       DATAIQ010000977         6557 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_71195, whole genome shotgun sequence.
ACCESSION   DATAIQ010000977 DATAIQ010000000
VERSION     DATAIQ010000977.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 6557)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6557)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6557
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_71195"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..793)
                     /locus_tag="VHN20_16025"
     CDS             complement(<1..793)
                     /locus_tag="VHN20_16025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012335106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathionylspermidine synthase family protein"
                     /protein_id="HEX2727329.1"
                     /translation="MKGEAYWDESAYYAFTLAQIEQDLEEPSRELHALCLELVSRAVR
                     DEALLARLAIPENAWDAVRASWDRRQSSLYGRFDFAYNGGGPAKLLEYNADTPTALYE
                     TGVFQWLWLEELIGRGELPADADQFNSLHDKLVARLATIAGGRRLHLTCMAGEAEDRG
                     TILYIEDCARQGGLETRFAPIEQIGFAEQAGFLDQAQEPIDLLFKLYPWEWMFREQFG
                     AHLDGSATQFVEPPWKAILSNKGILPLLWEMAPNHPNLLPAYFEDD"
     gene            complement(868..1476)
                     /locus_tag="VHN20_16030"
     CDS             complement(868..1476)
                     /locus_tag="VHN20_16030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015932013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1190 domain-containing protein"
                     /protein_id="HEX2727330.1"
                     /translation="MLLVAGAGVAAVGLARHDPSQREEDTLIYRSTQHCIDARQRSPG
                     DCRAAYDMARSEHGKAAPRYEAKEDCERHHGRGGCQDAALPGQTTLAFVPALAGYMMG
                     RTAAQNLPVQPLYRHVEKGRDEERHAGGGSGGVGGVGYCTGSGARVAASGGGTSARVA
                     SAVARESHASPRSIPRGGSGIVVARGGFGTTGHGISSHGSGS"
     gene            complement(1505..1903)
                     /locus_tag="VHN20_16035"
     CDS             complement(1505..1903)
                     /locus_tag="VHN20_16035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003602133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF350 domain-containing protein"
                     /protein_id="HEX2727331.1"
                     /translation="MASISGLPAFLLYFVVAVGLTAAYLLVYTLATAHNEFALIRQNV
                     QSAALALGLSLVGFALPLSSAIVHAQNILDCVIWGLVALVVQILIYWLVRLILPNLSE
                     RIASGEVAAALFLGAASLAGGIVNAASMSY"
     gene            complement(1945..2808)
                     /locus_tag="VHN20_16040"
     CDS             complement(1945..2808)
                     /locus_tag="VHN20_16040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX2727332.1"
                     /translation="MTRRIDHLVVAVRDLDGAADFYERLGFRVGTRNRHPWGTENRLV
                     QLAGTFIELITVGERADIPAHAPRAFSFGAFVRDYLARREGLAMLVLGTDDAKADALA
                     FAKTGIGDFEPFFFQRRGRRADGAETEVAFTLAFARDAAAPDAGYFVCQHHRPENFWS
                     PAFQQHANGAEDVSAVVLSAPAPEAHQAFLERFAATDATRPQGHDLSLGLARGRIDVV
                     TADDAAELYGSVEVDPNRTELVAFAIRVPDVRYVAVHLDAGAVPYQHIGSRLVVPASA
                     AHGVAIAFEPE"
     gene            complement(2866..3027)
                     /locus_tag="VHN20_16045"
     CDS             complement(2866..3027)
                     /locus_tag="VHN20_16045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727333.1"
                     /translation="MDLKFTALYGAALAVGTLALWWFVFPDWPEVAIEDGLLAGAVAS
                     VVTGIFSRA"
     gene            complement(3081..4709)
                     /locus_tag="VHN20_16050"
     CDS             complement(3081..4709)
                     /locus_tag="VHN20_16050"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003883 - CTP synthase activity [Evidence
                     IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006241 - CTP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HEX2727334.1"
                     /translation="MTRYIFITGGVVSSLGKGLASAALGALLQARGYKVRLRKLDPYL
                     NVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFTGVPATRHDNITTGRIYLDIITKE
                     RRGDYLGATIQVIPHVTNAIKEFVLSGNEGYDFVLVEIGGTVGDIEGLPFFEAIRQLG
                     NDLPRDNAIYIHLTLLPFMPSAGELKTKPTQHSVAELRSIGIQPDILLCRTDREIPRE
                     ERRKLGLFCNVRETAVIEARDAASIYDVPLAYHAAGLDDEVLAAFAERGAPAPDLSRW
                     QTISKRVKDPEGDVTIAVVGKYTGLKDAYKSLIESLHHGGIANKVKVNLEWIESEVFE
                     REEPAPFLEGVNGILVPGGFGQRGAEGKIQAVRYARERKIPYFGICFGMQMAVIEAAR
                     SLAGIDDANSTEFGPTTEPVVGLLTEWLKGNELEKRGANGDLGGTMRLGAYPARLRQG
                     SKVAEIYGSTDISERHRHRYEVNMGYRDRLEDKGMIFSGLSPDGLLPEIVEYADHPWF
                     VGVQFHPELKSRPFDPHPLFRSFVGAAVEQSRLV"
     gene            complement(4818..5231)
                     /gene="secG"
                     /locus_tag="VHN20_16055"
     CDS             complement(4818..5231)
                     /gene="secG"
                     /locus_tag="VHN20_16055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012335102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HEX2727335.1"
                     /translation="MQTVIIVIHLLIVLALIGVVLLQRSEGGLGLGGGGGVSGFMTGR
                     GQANALTKATAILATLFFLTSLGLSILGSWTRAPRSIFDTTAPGAPAGQPAPSAGQGS
                     DVLDQLQRMQGGGGAAQTPAPAPEAPAAPAVPQSR"
     gene            complement(5552..6319)
                     /gene="tpiA"
                     /locus_tag="VHN20_16060"
     CDS             complement(5552..6319)
                     /gene="tpiA"
                     /locus_tag="VHN20_16060"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004807 - triose-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HEX2727336.1"
                     /translation="MSVDRPRPLVAGNWKMNGRMASAKALGEIREGYTPGVKGKVDLL
                     VCPPATLVHSFAHVALGSRIAIGGQDCHAQESGAFTGDVSAEMLADLGATYVIVGHSE
                     RRQLHGEKDADVRAKAEAARRAGLTAIVCVGETRQEREAGKTLGVVRRQLRGSVPEVA
                     TEADLVIAYEPVWAIGTGLTPTTADVAEVHALIREELKRLVGKAHQTKVRILYGGSVK
                     PSNARELLAVANVDGALVGGASLVAADFLAIAGAYLG"
BASE COUNT         1056 a         2249 c         2240 g         1012 t
ORIGIN      
        1 gatcgtcctc gaaatatgcc ggcagcaggt tcggatggtt cggcgccatc tcccaaagca
       61 gcggcaaaat tcctttgttg gatagaatcg ccttccatgg tggttcgacg aactgggtgg
      121 cggagccgtc gaggtgcgct ccgaactgct cccggaacat ccattcccag ggatagagct
      181 tgaagagaag gtcgatcggc tcctgcgcct ggtcgagaaa accggcctgc tccgcgaagc
      241 cgatctgctc gatcggcgcg aatcgcgtct ccagacctcc ttggcgggcg cagtcctcga
      301 tgtagagaat ggtgccccga tcctccgcct cgccggccat gcaggtcagg tgaagccgcc
      361 ttccgcccgc gatcgtggct aggcgcgcca ccagcttgtc gtgaagtgaa ttgaattgat
      421 ctgcgtccgc gggcagttcg ccacggccga tcagttcttc gagccagagc cactgaaaga
      481 cgccggtctc ataaagtgcg gtcggcgtat cggcattgta ttcgagaagc ttcgcgggcc
      541 cgccgccgtt ataggcgaaa tcgaagcggc cgtagagcga gctctgccgg cgatcccagc
      601 tcgcccgaac ggcgtcccat gcgttttcgg ggattgccag ccgcgcaagc agtgcctcgt
      661 cgcgaacggc ccgggacacg agctcgagac aaagcgcgtg gagctcgcgg gacggctctt
      721 ccaggtcttg ctcgatctgc gcgagcgtga aggcgtaata ggcgctttcg tcccaatagg
      781 cctcgccctt caaggtgtgg aaggtgaaac cgctcgcctc ggcgatccgg cgccagtccg
      841 gccgctcctg gacggcgatc cggcgcacta ggatccgctg ccgtggctcg agataccgtg
      901 cccggtggtg ccgaagccac cgcgcgccac cacgattccg gatccacccc gcggaatgct
      961 gcgcggcgac gcgtgcgatt cacgggccac cgccgacgcc acccgcgccg acgtaccgcc
     1021 gcctgacgcg gcgacgcggg caccgcttcc ggtgcaatag ccgacgccgc cgacgccgcc
     1081 gctacccccg ccggcgtggc gttcctcgtc gcgtcccttc tcgacgtgac gatacaaagg
     1141 ctgcacgggc aggttctggg cggcggtgcg gcccatcatg tagcccgcca gcgccggcac
     1201 gaaggcgagc gtggtctggc ccggaagcgc agcgtcctga cagcctccgc ggccgtgatg
     1261 ccgctcgcag tcttccttcg cctcgtagcg cggcgccgct tttccatgct cgctccgcgc
     1321 catgtcgtat gcggcgcgac aatcgccggg actgcgctgc cgcgcgtcga tgcagtgctg
     1381 cgtgctgcga tagatcagcg tgtcctcttc acgttgcgag gggtcatggc gggccagtcc
     1441 gacggccgca acgccggcgc ctgcgacgag cagcaaggag accgtctgcg accgtttcat
     1501 cggatcagta cgacatcgag gcggcgttga cgatgccgcc tgccagcgat gcggccccga
     1561 gaaacagcgc cgcggccacc tctcccgacg cgatgcgctc ggacaggttt ggcagaatga
     1621 ggcgcaccag ccagtagatc agaatctgca cgaccagcgc gaccaggccc cagatcacgc
     1681 agtcgagaat gttctgcgca tgcacgatcg cgctcgacag cggcagcgcg aagccgacga
     1741 ggctgaggcc gagcgcgagc gccgccgact ggacgttctg acggatcagc gcgaattcgt
     1801 tgtgcgccgt cgccagcgtg tagaccagga gataggcggc agtgagtccg accgcgacga
     1861 cgaaatagag caggaacgca ggcaaccccg agatcgacgc aatcacagca ccgccagccc
     1921 ctctgttgcc gccccgaatc aagcctattc gggttcgaac gcgattgcca ctccgtgcgc
     1981 ggcgctcgcc ggcaccacga gccgcgagcc gatatgctga taggggacgg cgccggcgtc
     2041 gagatgcacg gcgacgtagc gcacgtccgg aacccggatc gcgaaggcga cgagctccgt
     2101 acggttcggg tcgacctcga ccgacccgta aagctcggcc gcgtcgtcgg cagtcaccac
     2161 gtcgatccgc ccgcgcgcga gcccgaggga caggtcatgc ccttgcggcc gcgtcgcatc
     2221 cgtcgcggcg aaccgctcga ggaatgcctg atgcgcctcc ggcgccggcg ccgacagcac
     2281 caccgcggag acgtcctcgg cgccgttggc gtgctgctgg aaggcagggc tccagaaatt
     2341 ttctggacgg tggtgctggc agacgaagta gccggcgtcg ggcgcggccg cgtcgcgcgc
     2401 gaaggcgagc gtgaaggcga cctcggtttc ggcgccgtcg gcgcgccggc cgcgccgctg
     2461 gaagaagaac ggctcgaaat cgccgatgcc ggttttggcg aaggccaggg cgtcggcctt
     2521 cgcgtcatcc gtgccgagga cgagcatggc gaggccttcg cggcgggcga gatagtcgcg
     2581 cacgaacgcg ccgaagctga acgcgcgcgg cgcatgcgct ggaatgtcgg cccgctcgcc
     2641 gaccgtgatc agctcgataa aggtgcctgc gagctggacg agacggttct cggtgcccca
     2701 tgggtgccgg ttgcgcgtgc cgacgcgaaa gccgagccgc tcgtagaaat cggcggcgcc
     2761 gtcgagatcg cggacggcga cgacgagatg gtcgatgcgg cgtgtcatgt gccctcacct
     2821 cccgagtgcg gcacggagga tcgcacatag cctgatggca tcagcctatg cccggctgaa
     2881 gataccggtc acgaccgacg cgacggcgcc tgcgagcagc ccgtcctcga tcgcgacctc
     2941 cggccagtcc gggaagacga accaccagag ggccagcgtg ccgacggcca acgccgcgcc
     3001 gtagagggct gtgaacttca ggtccatgcg gtcagcttaa ggcaagccgc accgggcgca
     3061 accgccgcag ccgccgctga tcacaccaat ctcgactgct ccaccgccgc gccgacgaag
     3121 ctgcggaaca gcgggtgggg atcgaacgga cgggacttga gctcggggtg gaactgcacg
     3181 ccgacgaacc agggatggtc ggcatattcg acgatctcgg gcagaaggcc gtccggggag
     3241 aggcccgaga agatcatgcc cttgtcctcg aggcggtcgc gatagcccat gttgacctcg
     3301 tagcggtggc ggtgacgctc cgagatgtcg gtgctcccgt agatctccgc caccttgctg
     3361 ccctggcgca ggcgcgccgg gtaggcgccg agacgcatgg tgccgccgag gtcgccgttg
     3421 gcgccgcgct tctcgagctc gttgcccttg agccactcgg tcaggaggcc gacgaccggc
     3481 tccgtggtcg ggccgaactc ggtcgagttg gcgtcatcga tcccggccag cgagcgcgcc
     3541 gcctcgatga ccgccatctg catgccgaag cagatgccga aatacgggat cttgcgctcg
     3601 cgcgcgtagc gcaccgcctg gatcttgccc tcggcgccgc gctggccgaa gccgcccggc
     3661 accaggatgc cgttgacgcc ttcgaggaac ggcgccggct cctcgcgctc gaacacctcg
     3721 ctctcgatcc actcgagatt gaccttgacc ttgttggcga tgccgccgtg gtgcagcgac
     3781 tcgatcagcg acttataggc gtctttgagc ccggtatatt tgccgaccac cgcgatggtg
     3841 acgtcgccct cgggatcctt cacgcgcttg gagatggtct gccagcgcga caggtcgggc
     3901 gccggcgcac cgcgctcggc gaacgccgcc agcacctcgt cgtcgagccc ggcggcgtgg
     3961 taggcgagcg gcacgtcgta gatcgacgcg gcgtcacgcg cctcgatcac ggcggtttcg
     4021 cgcacgttgc agaacaggcc gagcttgcgg cgctcctcgc gcgggatctc gcggtcggtc
     4081 cggcacagca ggatgtcggg ctggatgccg atcgagcgca gctcggccac cgaatgctgg
     4141 gtcggcttgg tcttgagctc gcccgcggac ggcatgaacg gcagcagcgt caggtggatg
     4201 tagatggcgt tgtcgcgcgg caggtcgttg ccgagctggc ggatggcctc gaagaacggc
     4261 aggccctcga tgtcgccgac cgtgccgccg atctcgacga gcacgaagtc gtagccctcg
     4321 ttgcccgaca gcacgaattc cttgatggcg ttggtgacgt ggggaatgac ctggatggtc
     4381 gccccgagat agtcgccgcg ccgctccttg gtgatgatgt cgagatagat ccggccggtg
     4441 gtgatgttgt cgtgccgggt cgccggcacg ccggtgaagc gctcgtaatg gccgaggtcg
     4501 agatcggttt cagcgccgtc gtcggtgacg aacacctcgc cgtgctgata ggggctcatc
     4561 gtgcccggat cgacgttgag gtacgggtcg agcttgcgca ggcggacctt gtagccgcgc
     4621 gcctgcagca gcgctcccaa agccgcggag gcgagcccct tgccgagcga ggacaccacg
     4681 ccgccggtga tgaagatata ccgcgtcatg ggcctcgccc attaaaggag gccggcacat
     4741 cacggaagag cgaagccaac tctgcgtctc ccatccacaa aaagagaggg ccggtgtccc
     4801 ggcccccgtt catcgcgtca gcgcgactga ggcaccgccg gcgcggccgg cgcctccggg
     4861 gcgggcgccg gcgtctgcgc ggcgccgcct ccgccctgca tgcgctgcag ctggtcgagg
     4921 acgtccgacc cttgcccggc cgacggcgcc ggctggccgg ccggcgcgcc cggcgcggtc
     4981 gtgtcgaaga tcgagcgcgg cgcccgcgtc cagcttccca ggatcgacag gccgaggctc
     5041 gtcaggaaga acagcgtcgc caggatcgcc gtcgccttgg tgagcgcgtt ggcctggccg
     5101 cggccggtca tgaagcccga tacgccgcct ccgccgccga gtccgaggcc gccttccgag
     5161 cgttgcagca agacgacccc gatcagcgcc aggacgatca gcaggtgaat gacgatgatg
     5221 accgtttgca tgtatccaaa acctcaaagc ggccgggcca ggggccggcc gctctcgcat
     5281 cttcaattgg cgcggcgtct aacatagctg gtgtggcgga tcaaaggccg caaccttcac
     5341 ccgcatcatt ccggggttcg cacgtcggcg aggagccggg caccggcgat ctccaccgag
     5401 tgcctgcaca ccttacgccg tcattccggg gcggcgcgca gcgccgaacc cggaacccac
     5461 gactggccgc gacggcgatt gcggccttgc acccggtcgt gggttccggg ctctcgctcc
     5521 gcgagccccg gaatgacaag gtgttgttgc gttaccccag gtaagcgccg gcgatggcga
     5581 ggaaatcggc cgcgaccagg ctggcgccgc cgaccagcgc gccgtcgaca ttggcgaccg
     5641 ccagcagttc cctggcattc gagggcttga ccgagccgcc atagaggatg cggaccttgg
     5701 tctgatgcgc cttgccgacc aggcgtttca gctcctcacg gatgagcgca tggacctcgg
     5761 ccacgtcggc cgtggtcggg gtcaggccgg tgccgatcgc ccagaccggc tcgtaggcga
     5821 tgaccaagtc ggcctcggtc gcgacttccg gcaccgagcc gcgcagctgc cggcgcacga
     5881 cgccgagcgt cttgcccgct tcgcgctcct ggcgggtctc gccgacgcag acgatggccg
     5941 tcagcccggc gcgccgcgcc gcctcggcct tggcgcgcac gtcggcatcc ttctcgccgt
     6001 ggagctggcg ccgctccgaa tggccgacga tcacgtaggt ggccccgaga tcggcgagca
     6061 tctcggcgga cacgtcgccc gtgaaggcgc ccgactcctg cgcgtggcaa tcctgcccgc
     6121 cgatggcgat gcgcgagccg agggcgacgt gagcgaagct gtggaccagc gtcgccggcg
     6181 ggcagacgag caggtcgacc ttgcccttga cgccgggggt atagccctcc cggatctcgc
     6241 cgagcgcctt ggcagacgcc atccgcccgt tcattttcca gttgccggcg accagcggac
     6301 gcggccgatc aacgctcatg accatctctc ctcgcaggac tcgccgcaac gcgcgccccg
     6361 ccctgctccc cttgcgccgc atgaacccgg atgacctccg ggcaggccct tttcggcgaa
     6421 gcgccgcccg cccggccctg gtccggagcg gcggcgccgg acatgcgcta gcagagcgcg
     6481 gcaagcgcga caatgcggac ggacggcccc ggccggtttc cgcccggccg gccttccccc
     6541 ggctgtgatg ttgggct
//
LOCUS       DATAIQ010000978         2231 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_71309, whole genome shotgun sequence.
ACCESSION   DATAIQ010000978 DATAIQ010000000
VERSION     DATAIQ010000978.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2231)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2231)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2231
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_71309"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            27..752
                     /locus_tag="VHN20_16065"
     CDS             27..752
                     /locus_tag="VHN20_16065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727337.1"
                     /translation="MAKQSQARQAGPREANEFQRRVAQRLADLKRNPFEAARLGGFKE
                     RGFVHDVVVLKKNSVTGENLKKLAVALDCDVDYLLGRQDVAKATSSVYSPGVVSVSGE
                     VAAGLWIDSGLDGAETFTLRPSPFPPDGRYPTAAQFDLVVRGSSIDRFAREGQILRCV
                     TLDAYRRDLADNQLVVAERFRGDLRERTAKRWKLNKGRLELWPDSDDPRWQEPLVVDP
                     ETGEANGDLVKIFGVVIYVFATP"
     gene            887..1093
                     /locus_tag="VHN20_16070"
     CDS             887..1093
                     /locus_tag="VHN20_16070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727338.1"
                     /translation="MPTLDTIGERASGTERAPSPAEPVGAAERAVLVQLEERVPGVIA
                     RQRRRQTVLNREAQEHVPAPAKRS"
     gene            1114..1449
                     /locus_tag="VHN20_16075"
     CDS             1114..1449
                     /locus_tag="VHN20_16075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727339.1"
                     /translation="MPGRRPLAANALADEMRHALLAIVALDEEIAGGRHGFSRSVTDD
                     AWITEKFRAADETLARFWAALVGDGSVTAASDDAEAAFRLRAQDNADADTPDLRADTA
                     TSYRRAAGY"
     gene            1545..>2231
                     /locus_tag="VHN20_16080"
     CDS             1545..>2231
                     /locus_tag="VHN20_16080"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX2727340.1"
                     /translation="MEGDGIERDGIRQGDAVVITGGGGGFGRAFALRFAREGARVAIW
                     DVNHESGAETVREVAAQGGEARLFQVDLAEPAAIAAAARDTLAALDTPFCVINNASIY
                     PRASVLEMPLETWNRTLGVNITAPFLVAKAFGGAMIAARRGVVINIASGRALEGAANG
                     VGYAATKAAILNFTKTLALEWAPHNIRVNAIIPGVSFTAQPLENTTPDELLSRGRKVP
                     LGRIGYPNDVA"
BASE COUNT          380 a          760 c          745 g          346 t
ORIGIN      
        1 cgccattttt gttggataaa tccgacatgg ccaagcagtc tcaagcccgg caggcggggc
       61 cgagagaggc gaacgagttc cagcgccgcg ttgcgcagcg tctcgccgat ctcaagcgta
      121 acccgttcga ggccgcgcgc ctcggcggct tcaaggagcg cggcttcgtc cacgacgtgg
      181 tcgtcctcaa gaagaacagc gtcacgggcg aaaacctgaa aaagctcgcc gtggcgctcg
      241 actgcgacgt cgattacctg cttggccggc aggacgtcgc caaggcgacc tcgtcggtct
      301 attcgcccgg cgtggtgagc gtcagcggcg aggtggcagc cggcctgtgg atcgattccg
      361 gcctcgatgg ggccgaaacc tttaccctgc gcccctcccc ttttcccccg gacgggcgct
      421 atcccacggc ggcacaattc gacctcgtcg tgcgcggcag ctcgatcgac cgtttcgccc
      481 gcgagggaca gatcctgcgc tgcgtcacgc tcgacgccta ccgacgcgac ctcgccgaca
      541 accagcttgt ggtcgccgaa cgcttccgcg gcgacctgcg ggagcggacc gccaaacgct
      601 ggaagttgaa taagggacgc ctcgagttgt ggccggacag cgatgatccg cgctggcagg
      661 agccgctggt cgtcgatccc gaaaccggcg aggccaacgg cgacctcgtc aagatttttg
      721 gcgtcgtgat ctacgtcttc gcgacgccgt aaggcgcgct cgaatcccca ccttccccga
      781 gatgcacagg ccgcttggca aggctcggca gtcttcgcct gccctccgat tgtcagttgg
      841 aaaaatccaa cttaggctct tgcttggcga aggaacggag cgcgagatgc ccaccctcga
      901 caccatcggc gagcgcgcct cgggcacgga gcgggccccc tctcccgcgg aacccgtcgg
      961 ggccgccgag cgcgccgtgc tggtgcagtt ggaggaacgg gtcccaggcg tgatcgcgcg
     1021 ccagcgccgg cgccagaccg tcctcaaccg ggaggcacag gagcacgtgc cagcaccggc
     1081 gaagcggtcg tgacggcagc gggcgaagga tcgatgccgg ggcgccggcc cctcgccgca
     1141 aatgcgctcg ccgacgaaat gcgccacgcg cttctcgcca tcgtcgccct ggacgaggag
     1201 attgccggcg gtcgtcacgg gttctcgcgc tcggtcacgg acgatgcctg gatcaccgaa
     1261 aaattccgtg ccgccgacga gacgctcgcg cgcttctggg cggcattggt cggcgacggc
     1321 tccgttaccg ccgcttccga cgatgccgaa gccgccttcc gcctgcgggc acaggataac
     1381 gccgacgccg atacgcctga ccttcgcgcc gacactgcga cctcgtatcg gcgcgcggcc
     1441 ggttattgaa gcaacgcagc cgggtgactt ctggcgctcc agagctcgcg atgcaattgt
     1501 ggcgacccgg cgaagtgcag gcaacaatca accaggagag gcgaatggaa ggagacggga
     1561 tcgagcgcga tggaatccgg cagggcgacg ccgtcgtgat cacgggaggc ggcggcgggt
     1621 tcggccgcgc ctttgcgctg cgtttcgcgc gcgagggcgc ccgggtggcg atctgggacg
     1681 tcaatcacga atccggtgcc gagaccgtac gcgaggtcgc tgcgcagggc ggcgaggcgc
     1741 gcctgttcca ggtcgatctc gccgagccgg cggcgatcgc cgcggcggcc cgcgacacgc
     1801 tcgcggcctt ggacacgccg ttctgcgtga tcaacaatgc aagcatctat ccgcgcgcca
     1861 gcgtcctcga gatgccgctg gagacgtgga accgcaccct cggcgtcaac atcaccgcgc
     1921 cgttcctggt tgccaaggcg ttcggcggcg ccatgatcgc cgcgcggcgt ggcgtcgtca
     1981 tcaacattgc ctcgggccgg gcgctcgaag gcgcagcgaa cggtgtcggt tacgccgcca
     2041 ccaaggcggc gatcctgaat tttacaaaga ccctcgcgct cgaatgggcc cctcacaaca
     2101 ttcgagtcaa cgcgatcatt ccgggcgtgt cgttcacggc gcagccgctc gagaacacga
     2161 cgcccgacga gctgttgagc cgcggcagga aagtgccgct cgggcgcatc ggctatccca
     2221 acgacgtggc c
//
LOCUS       DATAIQ010000979         2462 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_215328, whole genome shotgun sequence.
ACCESSION   DATAIQ010000979 DATAIQ010000000
VERSION     DATAIQ010000979.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2462)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2462)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2462
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_215328"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            111..401
                     /locus_tag="VHN20_16085"
     CDS             111..401
                     /locus_tag="VHN20_16085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019403214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HEX2727341.1"
                     /translation="MKGGWVYFMSNRRNGTLYVGVTANLSRRVWEHREGIADGFTKQY
                     GVKLLVYYESYRYVHDALQREKNIKKWPRRWKIDLIRSMNPEWRDLYEELAG"
     gene            complement(480..764)
                     /locus_tag="VHN20_16090"
     CDS             complement(480..764)
                     /locus_tag="VHN20_16090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012254975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory factor UbiK family protein"
                     /protein_id="HEX2727342.1"
                     /translation="MAQTNRFLDDIARLVTDAAGAAQGVGREIETVIKGQIERLLRDM
                     DVATREEVDVLRDMVVAAREENEQLALRVRALETQLNAAARPTTGTPEGI"
     gene            992..1876
                     /gene="lgt"
                     /locus_tag="VHN20_16095"
     CDS             992..1876
                     /gene="lgt"
                     /locus_tag="VHN20_16095"
                     /EC_number="2.5.1.145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010682821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008961 -
                     phosphatidylglycerol-prolipoprotein diacylglyceryl
                     transferase activity [Evidence IEA];
                     GO_process: GO:0009249 - protein lipoylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HEX2727343.1"
                     /translation="MPLTALTFPDIDPVAIAIGPFAIRWYALAYIAGLVGGWYYARRL
                     VQAEHLWTGVRRPTVTDIDDLIIWVAFGVVLGGRIGYILFYDFDSYRSDPLEMLAIWR
                     GGMSFHGGFLGTILALLLFARMRGLGGLSMLDLAAVVTPIGIFFGRIANFVNGELWGR
                     FAPDFPYAFVFPHAGPLPRHPSQLYEAFGEGLILFVVMAIAVRRFGFRRPGLLGGIFV
                     LGYAVARIVCEFFREPDPQLGFLFGASVEGLGGGVTMGMLLSLPMALVGLTAIWLAAR
                     GFTGPGPMARTSSGERVA"
     gene            1860..>2462
                     /locus_tag="VHN20_16100"
     CDS             1860..>2462
                     /locus_tag="VHN20_16100"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012333095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HEX2727344.1"
                     /translation="MSALLDELRQVIAVEGPIPLDRYMGLCLGHPVHGYYVTRDPFGA
                     HGDFTTAPEISQMFGELVGLWAAEVWRLMGSPRQMRLVELGPGRGTLMADLLRAARIV
                     PGFAQAVSVHLVETSPVLRARQQDTLAASGVPVAWHDRFADVPEGPAVVIANEFFDAL
                     PISQFVRTGRGWHERLVGLDADGQLAFGLASEPRAELPARG"
BASE COUNT          331 a          841 c          851 g          439 t
ORIGIN      
        1 gcgcgcgcca tgcgtcatgc ccgggctcgg cccgggcatc cacgccttcc gcgccgcggg
       61 cccagatagg aagcttgcct ggcgcaagtg cgcccttaag ctgcgagttc atgaagggcg
      121 gctgggtcta cttcatgagc aaccgccgca acggcacgct ctacgtcggc gtgaccgcca
      181 acctgtcgcg ccgcgtctgg gagcacaggg aaggcatcgc cgacggtttc acgaagcaat
      241 acggcgtcaa gctcctcgtc tattacgaga gctaccgcta tgtgcacgac gcgctccagc
      301 gcgagaagaa catcaaaaag tggccgcggc gctggaagat cgatctgatc cgctcgatga
      361 acccggagtg gcgcgacctt tacgaggagc ttgcgggata agcgtcgcag tggattgccg
      421 ggtcaagccc ggcaatgaca ataacagaga gcctgaaggc tgcgcagcca gcatccacgt
      481 cagatccctt cgggggtgcc cgtggtcggg cgggcggcgg cgttgagctg ggtctcgagg
      541 gcgcggacgc gcagggcgag ctgctcgttc tcctcgcgcg cggcgacgac catgtcgcgc
      601 agcacgtcga cctcttcgcg ggtggcgacg tccatgtcgc gcagcagccg ctcgatctgg
      661 cccttgatga cggtctcgat ctcgcgcccg accccttgcg cggcgcccgc cgcgtccgtg
      721 acgagacggg cgatatcgtc gaggaagcgg ttcgtctggg ccatcgattg atcctctggg
      781 catgatccgg cgaagtggac accgcttcgc cgaaagagat catgccccgc gataagaaag
      841 agagcaggct cgattcaata tgaatcgatc ctgcttcggg cggcgtgccc gccgcgggcg
      901 gcacggcgca atgtggacat cattgccggc gatagcaacc cggttgacgg gccggcccgg
      961 cgcggtccat gtccgccgaa acgagacccg catgcctctg accgccttga cctttcccga
     1021 catcgacccg gtcgcgatcg cgatcgggcc gttcgccatc cgctggtatg ccctcgccta
     1081 tatcgcgggg ctggtcggcg gctggtatta tgcgcgccgc ctggtccagg ccgagcatct
     1141 ctggacgggc gtccggcggc cgaccgtgac cgacatcgac gacctgatca tctgggtcgc
     1201 cttcggcgtc gtgctgggcg ggcgcatcgg ctacatcctg ttctacgatt tcgactcgta
     1261 ccggtccgat ccgctcgaga tgctggcgat ctggcggggc ggcatgtcct tccacggcgg
     1321 ctttctcggc acgatcctcg cccttctcct gttcgcgcgc atgcgcggct taggcggcct
     1381 gtcgatgctc gatctcgccg cggtggtcac gccgatcggc atcttcttcg gccgcatcgc
     1441 caatttcgtg aacggcgagc tgtggggccg cttcgcgccc gatttcccgt acgccttcgt
     1501 gttcccgcat gcgggcccgc tgccgcgcca tccgagccag ctttacgaag cgttcggcga
     1561 ggggctcatc ctgttcgtcg tcatggcgat tgcggtgcgg cggttcggct tccgccggcc
     1621 ggggctgctc ggcggcatct tcgtgctcgg ctacgccgtg gcgcgcatcg tctgcgagtt
     1681 cttccgcgag cccgatccgc agctcggctt cctgttcggc gcatcggtcg aggggctcgg
     1741 cggcggcgtc accatgggca tgctgctgtc gctgccgatg gcgctcgtcg gcctgaccgc
     1801 catctggctg gcggcgcgcg gcttcacggg ccccggtccg atggcgagga cctcgtccgg
     1861 tgagcgcgtt gcttgacgag ctgcgccagg tgatcgccgt cgaagggccg atcccgctcg
     1921 atcgctacat gggcctgtgc ctcggccatc cggtgcacgg ctattacgtg acgcgcgatc
     1981 cgttcggggc gcatggcgac ttcacgaccg ctcccgagat cagccagatg ttcggcgagc
     2041 tggtcggcct gtgggccgcc gaggtctggc gcctgatggg ctcgccgcgg cagatgcggc
     2101 tcgtcgagct cgggcccggc cgcggcacgc tgatggccga cctgctgcgc gccgcccgca
     2161 tcgtgccggg cttcgcgcag gccgtgtcgg tgcatctggt cgagacgagc ccggtgctcc
     2221 gcgcgcggca gcaggacacg cttgccgcga gcggcgtccc ggtcgcctgg cacgaccgct
     2281 tcgcggacgt ccccgaaggc ccggccgtcg tgatcgccaa cgagttcttc gacgcgctgc
     2341 cgatcagcca gttcgtgcgc accgggcgcg gctggcacga gcggctggtc ggcctcgacg
     2401 cggacgggca gctggccttc ggcctcgcgt cggagccccg ggcggagctg ccggcgcgcg
     2461 gc
//
LOCUS       DATAIQ010000980         2290 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_261197, whole genome shotgun sequence.
ACCESSION   DATAIQ010000980 DATAIQ010000000
VERSION     DATAIQ010000980.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2290)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2290)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2290
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_261197"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1922
                     /locus_tag="VHN20_16105"
     CDS             <1..1922
                     /locus_tag="VHN20_16105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011581997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="alpha-1,4-glucan--maltose-1-phosphate
                     maltosyltransferase"
                     /protein_id="HEX2727345.1"
                     /translation="NVWPEVDGGRAPVKRVVDDVLEVWADIFTDGHEKIAAAVLYRQA
                     GDTEWRRAPKRFHDNDRWIGRFPLERNGRYEFTIESWRDPFSSWLDEIRKKQAAGQQL
                     RLETIEGVHMAEEAAARATGADAQAFSRLLERLKAEPEGSEAQLALLLDEDNEALVCR
                     NAERENLSRYPVVLEVVADRLAARFSAWYELFPRSQSGDPSRHGTFDDVIRRLSYVKD
                     LGFDVLYFTPIHPIGRTNRKGKNNSLKAAPGDVGSVYAIGAEEGGHKAVHPELGTLDD
                     FRRLVDAAHAHGLEIALDFAVQCSPDHPWIKQHPEWFDWRPDGSIKFAENPPKKYEDI
                     VNVHFYGASLPSLWVELRDVVLFWVSQGVKIFRVDNPHTKPIPFWEWMIREVNDRHPD
                     VIFLAEAFTRPKMMRKLAKIGFQQSYTYFTWRNTKQELTEYITELMGPMGEYYRPNFF
                     ANTPDINPPYLQTGGRPGFIVRATLAATLSSVYGLYNGFEICDATPVPGKEEYLDSEK
                     YELKAWNFDVPGNIKDHIRKLNLIRRQNPALWDFRNTRFVNAWNDNILAYARLTPAKD
                     NCVVVLVNLDPRNRQECTYEVPLWEFGLPDHAAIEAEDLLRGGRFKLHGKTHRIALDP
                     IERPVAIWRLIPPSP"
     gene            1933..>2290
                     /locus_tag="VHN20_16110"
     CDS             1933..>2290
                     /locus_tag="VHN20_16110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017485987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HEX2727346.1"
                     /translation="MIDRSDPQWYRDAIVYQLHVKSFFDANDDGMGDFEGVTRKLDYI
                     KDLGATAIWVMPFYPSPLRDDGYDIADYRNINRSYGTMRDFRRFVREAHERGLRVITE
                     LVINHTSDQHPWFQKAR"
BASE COUNT          430 a          790 c          698 g          372 t
ORIGIN      
        1 agaacgtctg gcccgaggtc gacggcggcc gcgctcccgt caagcgcgtc gtggatgacg
       61 tgctcgaggt ctgggccgac atcttcaccg acggacacga aaagatcgcc gccgccgtgc
      121 tctaccggca ggcgggagac accgagtggc ggcgcgcgcc gaagcgcttt cacgacaacg
      181 accgctggat cggccgcttc cctctggagc gcaacggccg ttacgagttc acgatcgaaa
      241 gctggcgtga tccgttcagc tcctggctcg acgagatccg caagaagcag gcggccggcc
      301 agcagctgcg gctcgagacg atcgagggcg tgcacatggc cgaggaggcc gcggcgcgcg
      361 cgaccggcgc cgacgcgcag gccttttcgc gcctgctcga gcggctaaag gccgagccgg
      421 aagggtccga ggcgcagctc gcgctgctgc tcgacgagga caacgaggcg ctggtctgcc
      481 gcaacgccga acgcgagaac ctgtcgcgct accctgtcgt cctcgaagtg gtcgccgacc
      541 gtctcgccgc gcgcttctcc gcctggtacg agctgtttcc gcgctcgcag tcaggcgatc
      601 cgagccggca cggcacgttc gacgacgtca tacgccgcct gtcctacgtg aaggatctcg
      661 gcttcgacgt cctctacttc acgcccatcc acccgatcgg caggaccaac cgcaagggca
      721 agaacaactc gctcaaggcg gcgccgggcg acgtgggcag cgtctacgcc atcggcgcgg
      781 aggaaggcgg ccacaaggcc gtgcatccgg agctcggcac gctcgacgat ttccgccgcc
      841 tggtcgacgc cgcccatgcg catggcctcg agatcgccct cgatttcgcc gtgcagtgct
      901 cgccggacca cccgtggatc aagcagcatc cggagtggtt cgactggcgc ccggacgggt
      961 ccatcaagtt cgccgagaac ccgccgaaga aatacgagga catcgtcaac gtgcatttct
     1021 acggcgcttc gctgccctcg ttatgggtcg agctgcgcga cgtcgtcctc ttctgggtca
     1081 gtcagggcgt gaagatcttc cgcgtcgaca atccgcacac caagccgatc ccgttctggg
     1141 aatggatgat ccgcgaggtc aacgaccggc atccggacgt catcttcctc gccgaggcct
     1201 tcacgcgccc caagatgatg cgcaagctcg ccaagatcgg cttccagcag tcctacacct
     1261 acttcacgtg gcgcaacacg aagcaggagc tgaccgagta catcaccgag ctgatggggc
     1321 cgatgggcga gtattaccgg cccaacttct tcgccaacac gcccgatatc aacccgccct
     1381 acctgcagac cggcggccgg cccggcttca tcgtgcgggc gacgctcgcc gcgacgctgt
     1441 cgagcgtcta cgggctctac aacggtttcg agatctgcga cgcaacgccc gttcccggca
     1501 aggaagagta tctcgacagc gagaaatacg agctcaaggc atggaacttc gatgtgcctg
     1561 gcaacatcaa ggaccatatc cgcaagctca acctgatccg gcgccagaac ccggccctct
     1621 gggacttccg caacacgcgt ttcgtcaatg cctggaacga caacatcctg gcttacgcgc
     1681 gcctgacgcc cgccaaggac aattgcgtcg tcgtgctggt taatctcgat ccccgcaacc
     1741 ggcaggaatg cacctacgag gtgccgttgt gggagttcgg cttgccggac cacgccgcca
     1801 tcgaagccga ggatctgctg cgcggcgggc gcttcaagct gcacggcaag acgcaccgca
     1861 tcgcgctcga tccgatcgag cgcccggtcg ccatctggcg tctgatcccg ccgtcaccct
     1921 gagagccgaa gaatgatcga ccgcagcgac ccgcagtggt atcgcgacgc catcgtctat
     1981 cagctgcacg tcaagtcgtt cttcgacgcg aacgacgacg gcatgggcga tttcgaaggc
     2041 gtcacgcgca agctcgacta catcaaggat cttggcgcga ccgccatctg ggtgatgccg
     2101 ttctatccgt cgcccttgcg cgacgacggc tacgacatcg ccgactatcg caacatcaac
     2161 cggtcctacg ggaccatgcg cgacttccgc cgcttcgtgc gcgaggcgca cgagcgcggt
     2221 ctccgggtga tcaccgagct tgtgatcaac cacacgtccg accagcatcc gtggttccag
     2281 aaggcgcgcc
//
LOCUS       DATAIQ010000981         5344 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_164227, whole genome shotgun sequence.
ACCESSION   DATAIQ010000981 DATAIQ010000000
VERSION     DATAIQ010000981.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 5344)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5344)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5344
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_164227"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            157..486
                     /locus_tag="VHN20_16115"
     CDS             157..486
                     /locus_tag="VHN20_16115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727347.1"
                     /translation="MRLITLSALALYALTIPASAGTSVAQFSDWPEQIQLMYVSGVHD
                     GFLSLRLKGDDVATRDRLNKCLSNLETGREKNKAFQAWIRAHPRVMALEVHSAYGRFA
                     FDTCQSH"
     gene            complement(640..1065)
                     /locus_tag="VHN20_16120"
     CDS             complement(640..1065)
                     /locus_tag="VHN20_16120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727348.1"
                     /translation="MSSKLETTKPAAENFLRQQAKFDAFVDCYNNERPHQPLAMRCPA
                     ELYSPSPRPYRGLPELDYPFHDKIVIVTTCGRICFNNQKINLSQVFAGQMVGISQVDD
                     HLWLASFMHYDLGYFDDEPCRLEPIANPFGPKVLPMSPE"
     gene            1494..1652
                     /locus_tag="VHN20_16125"
     CDS             1494..1652
                     /locus_tag="VHN20_16125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727349.1"
                     /translation="MVLPNQLWLFDLTAWDEAVAPETEKAEKKRRPRANRAAIKPVQL
                     SLFVPASV"
     gene            complement(1738..2439)
                     /locus_tag="VHN20_16130"
     CDS             complement(1738..2439)
                     /locus_tag="VHN20_16130"
                     /inference="COORDINATES: protein motif:HMM:NF013053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family protein"
                     /protein_id="HEX2727350.1"
                     /translation="MSSDFEDHCWKDLVPAEILDIYAPYRRKTFVGPSPALVAIDLYE
                     MAYQGGPLPVAEVTQKYPSSCGEHAWAAIAPTQRLFDAARRAGLPVFYSTGDARADAR
                     PDRISATKRVASRPADLYAIRPEFKPQPGDVVIHKQRASAFFGTPLAAHLTQLGVRTV
                     IMCGESTSGCVRASAVDAYSHGFHVVLVEECCFARSPLSHKINLFDLHHKYADVMHVD
                     EVLAHLGKLGLQAAS"
     gene            2597..3673
                     /locus_tag="VHN20_16135"
     CDS             2597..3673
                     /locus_tag="VHN20_16135"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX2727351.1"
                     /translation="MTKVRLTTRNFFTSLAALGVGALMALPALPAQAQMSRVAEVAGY
                     QGPDRDKRLIEGAKKEGEVTVYSSMPVDDNTALFDAFEKKYGIKVKVWRGSSEDIVRR
                     TLAETKGGRFDVDVIVNNGLGLEPLHREKVLQAVKSPHLAELIPQAVPPHGEWVAKYL
                     NVFVQAYNTNLVRKDDLPKTYRDLLKPQWKGKLGIEAEDYDWLAEMVRDMGEAEGLKL
                     FREIVATNGISVRRGHTLLTNLTVAGEVPLALTVYSFTAEQLKNKGAPLDWFILGPAI
                     ARPNGVGVVKTAQRPHAAVLLFDFLISDDGQKIFAARNFVPTSKKFDSPFKSSLKVVD
                     TGRMLDEGKPWQDHFERIFVKQAR"
     gene            complement(3842..4450)
                     /locus_tag="VHN20_16140"
     CDS             complement(3842..4450)
                     /locus_tag="VHN20_16140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin transporter BioY"
                     /protein_id="HEX2727352.1"
                     /translation="MSSGSVPASVPAPTFAELLWPARASGAAAALRAVVLAVAGSALL
                     AISAKIQVPIPPVPLTMQTLVVLLIGATYGWRLAGATTLLYIAEGMAGLPVFANTPPQ
                     VASPAYLLGPTGGYLIGYVAAAMLMGFLAERGWDRSLWRVIVMMTIGHIVIFAFGLAW
                     LAHLFGGAKAWAVGVAPFIAGTVIKTALAAALIKAAWVVARR"
     gene            4582..>5344
                     /locus_tag="VHN20_16145"
     CDS             4582..>5344
                     /locus_tag="VHN20_16145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015930906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX2727353.1"
                     /translation="MSDDLVFDRDFSAPAGDCIALSPLMRRIVAPNPGPFTFTGTCSY
                     VVGRGRVAIIDPGPDLAAHVAALLAAVRGESVTHIVVSHTHRDHSPAARALKAATGAP
                     IVGCSRHRAARVPGTGDRLEVSGDVEHAPDQELREGDAVTGPGWTLQALETPGHLANH
                     LCFVLPEDNALFSADHVMAWSTSVVAPPGGSMRDYMAYLAKLTRRGERVYWPGHGGPV
                     RDPQPYVAALIAHRRGREAAILARIAAGDRTIGAMR"
BASE COUNT          957 a         1760 c         1751 g          876 t
ORIGIN      
        1 cttctgttcg ctccccgcta cggcatccta gatgatttgc tctggatcgg tcttgctgcc
       61 gcagtggtgt tagttagtcg gctaacgaac aaggattggt ttgttccacc tgcacaatag
      121 aaggcttagc actgtggcct accgggagct gcttatatga gactgatcac gctttcagcg
      181 ttggctttgt acgcgctcac catcccggct agtgccggca cgtccgttgc ccaattcagc
      241 gactggccag agcagattca gctcatgtat gtgtccggtg tccatgacgg ctttcttagc
      301 ttgaggctaa aaggtgatga tgtcgctacc cgggaccggc tcaacaaatg tctgagcaat
      361 ctagaaacgg gacgcgaaaa gaacaaagcc tttcaggcat ggattcgggc acatcctcgc
      421 gtaatggcgc tagaggttca ttccgcctac ggccggttcg cgttcgatac gtgccagagt
      481 cattgatccg attgatggca tcgaggggat gacgaactct cagtatccaa tgaaccgtta
      541 acgtcaaaag ctatcctgag acatccttgg tcacgtccaa gacgcagcgc cccgccgacc
      601 accaccatta tggtccattc cggtcacatg ggtgacggat tattccggag acataggtaa
      661 cactttcggg ccgaacgggt tagcgatcgg ctcgagcctg catggctcgt cgtcgaagta
      721 tcccagatcg tagtgcatga agctggccag ccagagatgg tcgtcgacct ggctgatccc
      781 gaccatctgg ccggcgaaga cctggctcag gttgatcttc tggttattga agcagatgcg
      841 gccgcaggtg gtcacgatca cgatcttgtc gtggaacggg tagtcgagct cgggcaggcc
      901 gcgatagggc cgcggtgacg ggctgtagag ctcggccggg cagcgcatgg ccaggggctg
      961 gtgcggtcgc tcgttgttgt agcagtcgac gaaggcgtcg aatttggcct gctgccgcag
     1021 gaagttctcg gcagccggct tggtggtctc gagcttcgaa ctcatcgcag agctgcgaca
     1081 tggtctcgcc gtcgagcacc cgcgcgatga acttcacacg ctcgtccatg acgtgacact
     1141 ccttccacgg cacctttgcc tctccgcaaa gggccaagag tgtcacccat gtctccggaa
     1201 tgccgtgtca cccttctctc aggaagggca agcctcaatt cccacatcgc gcccgcgacc
     1261 atgtcgccga cgtgtgcgcc tcagagagca ccgatcgggc cctgcggagg cactttgctg
     1321 cctctttagg ccatccttta ctccgtcagg gcctacttcg ctcccaaccg cagcccgaat
     1381 ctgatagggc tccatcctcc ccgaccagac gatctcagat gacgcacgac ggctccccat
     1441 ccctcacatc tttcgcaaaa aggggtacga gggcgaagca gcgcggcggg acgatggtgc
     1501 tgccaaacca gctctggctg ttcgatctca ccgcctggga cgaagcggtg gcgcctgaga
     1561 ccgagaaggc cgagaagaag cggcggccca gagccaaccg ggctgcgatc aagccggttc
     1621 agctctcgct gttcgtcccg gcatcagtgt aaggcacgct gacgctccct gccgcagctt
     1681 cacgcggctc gccagacgat ttgcaaggat cggaagctcg ccaggagcgg gcgcccctca
     1741 gctcgctgcc tgcagcccca gcttgccgag atgcgccaga acctcgtcga catgcatcac
     1801 gtccgcatat ttgtggtgca ggtcgaacag gttgatcttg tgcgagagcg ggctgcgggc
     1861 gaagcagcat tcctcgacca gcaccacgtg gaagccgtgc gagtaggcgt cgaccgcgga
     1921 ggcgcgcacg cagcccgacg tgctctcgcc gcacatgatg accgtgcgca ccccgagctg
     1981 cgtcagatgt gccgcgagcg gcgtgccgaa gaaggcgctg gcgcgctgct tgtggatgac
     2041 gacgtcgcca ggctgtggct tgaactcggg gcggatggcg tagaggtccg ccggccggct
     2101 ggcgacgcgc ttggtcgctg agatcctgtc aggccgcgcg tcggcgcgcg cgtcgccggt
     2161 cgagtagaac accggcaggc cggcccgccg cgccgcatcg aacaggcgct gcgtcggggc
     2221 gatggcggcc caggcatgct cgccgcacga gctcggatat ttttgcgtga cctccgcgac
     2281 cggcagcggg ccgccctgat aggccatctc gtagaggtcg atggcaacca gcgcgggcga
     2341 cggcccgacg aaggtcttgc ggcggtaggg cgcgtagatg tcgaggatct cggccggcac
     2401 cagatccttc cagcaatggt cctcgaaatc gctgctcatg tcgtcaaacc tcccctgacg
     2461 ggcgcgactg aagccgacgc gcgggcgggc gtcaaccggc ctcggcgctg ctgatacccc
     2521 tgtagccagc cccggcccct tccgttagct tcgccgcccg cccgaaggcc aacaaaggac
     2581 aatcaaggga gacccaatga ccaaggtccg gctcacgaca cgcaattttt tcacctcgct
     2641 cgccgcgctc ggcgtcggcg ccctcatggc gctccctgct ctgcccgcgc aggcccagat
     2701 gagccgggtc gccgaggtcg cgggctatca gggccccgac cgcgacaagc gcctgatcga
     2761 gggcgccaaa aaggaaggcg aagtcaccgt ctattcgtcg atgccggtcg acgacaacac
     2821 cgcgctgttc gacgccttcg agaagaaata cggcatcaag gtcaaggtgt ggcgtggcag
     2881 ctcggaggac atcgtccggc gcacgctcgc cgagaccaag ggcgggcgct tcgacgtcga
     2941 cgtgatcgtc aacaacggtc tcgggctcga gcccctgcat cgcgaaaagg tgttgcaggc
     3001 agtcaagtcg ccgcatctcg ccgagctgat cccgcaggcc gttccgccgc acggcgaatg
     3061 ggtcgccaaa tacctcaatg tcttcgtgca ggcctacaac accaacctgg tcaggaagga
     3121 cgacctgccc aaaacctatc gcgacctcct caagccgcag tggaaaggca agctcggcat
     3181 cgaggcggag gattacgact ggctcgccga gatggttcgc gacatgggcg aggcggaagg
     3241 gttgaagctg tttcgcgaga tcgtcgccac caacggcatc tcggtgcggc gcgggcacac
     3301 gctcctgacc aatctcaccg tcgccggcga ggtgcccctg gcgctgaccg tctattcatt
     3361 caccgccgag cagctcaaga acaagggcgc gccgctcgac tggttcatcc tcggcccggc
     3421 catcgcccgc ccgaacggcg tcggcgtggt gaagacggcg cagcgtccgc acgcggccgt
     3481 gctgctcttc gacttcctga tcagcgacga cggccagaag atcttcgccg cgcgcaactt
     3541 cgtgccgacc agcaagaagt tcgactcgcc gttcaagagc tcgctcaagg tcgtcgacac
     3601 cggcaggatg cttgatgaag gcaagccctg gcaggatcat ttcgagcgca tcttcgtgaa
     3661 gcaggcgcgc tgagcgccct tgtcatggcc ggccttgtgc cggccatccc gatcggtgga
     3721 gcgctatcaa tcggaatgcc cggcgcaagg ccgggcatga cacagtggag cgttagcggt
     3781 acgcgagtcg cgcactacga agcaggatgc ccggcacaag gccgggcatg acagcgtggg
     3841 gttagcgccg cgcgacgacc caggcggcct tgatcagcgc ggcggcgagc gcggtcttga
     3901 tgaccgttcc ggcgatgaac ggcgcgacgc cgacggccca ggccttggcg cccccgaaca
     3961 gatgcgcgag ccaggcgagc ccgaaggcga agatcacgat gtgaccgatg gtcatcatca
     4021 cgatcacgcg ccacagcgag cggtcccagc cgcgctcggc gaggaagccc atcagcatcg
     4081 ccgcggccac gtagccgatc aggtagccgc cggtcggccc gagcagatac gccgggctcg
     4141 ccacctgcgg cggcgtgttg gcgaagaccg gcaggccggc catgccttcg gcgatgtaga
     4201 gcagcgtggt cgcgccggcg aggcgccagc cataggtggc gccgatcagc agcacgacga
     4261 gcgtctgcat ggtcaacggc accggcggga tcggcacctg gatcttggcc gagatggcga
     4321 gcagcgccga gccggccacc gccaggacca cggcgcggag cgcagccgcg gcgccactgg
     4381 cgcgcgccgg ccacagcagc tcggcgaagg tgggagcggg aacggaagca gggacagagc
     4441 cgctcgacat caggatctcc ttgtgcgcca tccgttggtt ggccggctga ttgggccgat
     4501 ctatacgggc tggggccggc gccctcaaca gggaagtcgg cccggaaagg cgtgaacccg
     4561 agcgcaggat ccagtgaacc gatgagcgac gatctcgtct tcgaccgcga tttttccgcg
     4621 ccggcgggcg actgcatcgc cctcagcccg ctcatgcgcc gcatcgtcgc gcccaatccg
     4681 gggccgttca cgttcacggg cacgtgcagc tacgtcgtcg ggcgcggccg cgtcgcgatc
     4741 atcgacccgg gccccgatct cgccgcgcac gtcgcggcgc tgctcgcggc cgtgcgcggc
     4801 gagagcgtga cgcacatcgt cgtgtcgcac acgcaccggg accactcgcc ggcggcgcgg
     4861 gcgctcaagg ctgcgaccgg cgcgccgatc gtcggctgca gccgccatcg cgcggcccgt
     4921 gtgccgggca ccggcgatcg gctcgaggtg agcggcgatg tcgagcacgc gccggaccag
     4981 gagttgcgcg agggcgacgc cgtcaccggg ccgggctgga cgctgcaggc gctcgagaca
     5041 cccggccacc tggccaacca tctgtgcttc gtcctgccgg aagacaacgc gctgttctca
     5101 gccgaccacg tcatggcgtg gtcgacatcg gtggtggcgc cgcccggcgg ctcgatgcgc
     5161 gactacatgg cctacctggc gaagctgacg cgccgcggcg aacgcgtcta ctggccgggc
     5221 cacggcggcc cggtgcgcga cccgcagcct tacgtcgccg cgctgatcgc gcaccggcgc
     5281 gggcgcgagg ccgcgatcct ggcccgtatc gccgcgggcg accgcacgat cggcgcgatg
     5341 agat
//
LOCUS       DATAIQ010000982         1638 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_261394, whole genome shotgun sequence.
ACCESSION   DATAIQ010000982 DATAIQ010000000
VERSION     DATAIQ010000982.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1638)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1638)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1638
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_261394"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            80..1612
                     /locus_tag="VHN20_16150"
     CDS             80..1612
                     /locus_tag="VHN20_16150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727354.1"
                     /translation="MSAISCTAILIGCTLLPAAAQTSRDTARRLLDGAIEMSTAVHPE
                     TATAAFMRAGITYAALDKKTALGLLQRAFSMLASVANEDVREEYATAIVRAVADLDLR
                     SASALLAQLPKPAPATTAVVRQMLAAKDFDDAMELLAVMPAEAEYPHEAASHLIAWLP
                     QNDPRRIIAFGRATAAFTRVPVGPFPALVERYAGQMPAELRAQALTVLLGRIEAWKDV
                     TSSISGTGSDDEPEIEIQSNSRRELREIVAVARTLDPAAVDRIVAQRAEIAAALAGFR
                     RPRRPAEAIAVNSAENKTEDDEPFSPPFGIGMAADLDSFRREIGEYTKAAKQAQRVSK
                     ALASDPSEAVRLARELPESIRAEALAVIASTMVAKDPAFAGGVLDSCVLEIERIANPA
                     YRISALVKLGGIYVKLKDRPRAFAAYERALADTTPLWASDSSTRRANVASRDTWPSTQ
                     AARTAVHEAALTLGTEAEPLLSQIPAPDLAVLARIQMARALLGLTLDIHNINVRWVEK
                     EK"
BASE COUNT          288 a          573 c          514 g          263 t
ORIGIN      
        1 gcgcagcccg cgcgtacggc cgcagccgca gcgctgacca gtgagctgat cctgtggtcc
       61 aatgagagcg gtcccgcgca tgtctgccat aagctgcact gcgatcctga tcggctgcac
      121 gctgctcccc gcagccgcac agacgtctcg cgataccgcc cgcaggctgc tcgacggggc
      181 cattgaaatg tccaccgcag tccaccccga gaccgcgacc gcggcgttca tgcgcgcggg
      241 tatcacctat gcggccctcg ataaaaagac cgctctcggt ctgctgcagc gggccttttc
      301 gatgcttgcg tccgtcgcca acgaagacgt gcgcgaggag tatgccacag caatcgtgcg
      361 cgctgtcgcc gacctggacc tccggtccgc cagcgctttg ctggcgcaac tccccaaacc
      421 tgcgccggcg acgaccgccg tcgtccggca gatgctcgcg gccaaggact tcgatgacgc
      481 gatggaactc ctcgccgtca tgcccgccga ggccgagtat cctcatgaag cagcttcgca
      541 cctcatcgcg tggctgccgc agaacgatcc ccggcgcatc atcgcgttcg gccgggcgac
      601 ggcggccttt acgcgcgtgc ctgtcggccc atttcccgca ctggtcgaac ggtatgccgg
      661 acagatgcct gccgagttgc gagcccaggc gctcaccgtt ctgttggggc gcatcgaagc
      721 ctggaaggat gtcacgagct caattagcgg caccggcagc gacgatgagc cggagatcga
      781 gatccagtcg aactcgcgca gggagttgcg cgagatcgtt gccgtcgccc gaacgctcga
      841 tccggcagcg gtagatcgaa tcgtcgcgca gcgtgccgaa atcgccgccg ctctcgccgg
      901 gttccgccgg ccgcggcgcc cggccgaggc catcgccgtg aactctgcgg aaaataagac
      961 tgaggacgac gagccgttct cgccgccatt cggcatcggc atggctgccg atctggacag
     1021 tttccgccgg gagatcggcg aatataccaa ggccgcgaaa caggcacagc gcgtcagcaa
     1081 ggcactcgcg agcgacccct cagaagccgt gcgcctcgcg cgtgagctac ccgagtcgat
     1141 ccgggccgaa gccctcgcgg tcatcgcgtc aacgatggtc gccaaggacc cggctttcgc
     1201 cggcggcgtt ctcgactcct gcgtcctcga aatcgagcgg atcgctaacc ccgcttaccg
     1261 gatttccgcc ctggtcaaac tgggcggcat ctacgtcaag ctgaaagacc ggccccgcgc
     1321 cttcgcggcg tatgaacggg cactggccga cacgacgccc ctttgggcat cggacagcag
     1381 cacccgccgg gcgaacgttg cgtctcgcga cacatggccg tcgacgcagg ccgcacgcac
     1441 cgctgtgcac gaagcagcgt tgactctggg caccgaggcc gagccgttgc tgtcgcagat
     1501 cccagcgccg gacctggcgg ttttggcacg tatccagatg gcgcgggcgc tgctcggcct
     1561 gacgctcgac attcacaaca tcaacgtccg ctgggtcgag aaggagaagt aaggaccttc
     1621 agccgcccag tcgtgagt
//
LOCUS       DATAIQ010000983         1704 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_261476, whole genome shotgun sequence.
ACCESSION   DATAIQ010000983 DATAIQ010000000
VERSION     DATAIQ010000983.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1704)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1704)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1704
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_261476"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..651
                     /locus_tag="VHN20_16155"
     CDS             <1..651
                     /locus_tag="VHN20_16155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727355.1"
                     /translation="PHDRAVGATVKRVPALVSISMEEGMRFTFTTAVCLALAGAPAAA
                     LAQTSGGASGGSAGGTSGGTASGSSGGISSGAPGTTSPSGTIAAPSGATGPNVSGSAI
                     GGGASPGAQTGNPSASPSGASPAGAQAGNPAATPSGSPAGTQSGNPAAPPLGTASAPR
                     GGTAPPAITGSTSGSLTNQAGAASSGGSPGARPETDKERQAQERMRRATEGICTGC"
     gene            complement(836..1093)
                     /locus_tag="VHN20_16160"
     CDS             complement(836..1093)
                     /locus_tag="VHN20_16160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727356.1"
                     /translation="MKAMWHVVTADEVRLSEQLASLDAQQYRLELKIRAAVHRQRYSP
                     DPADVARAVEEEQGLMTELDRVMTKIRAVEGQLALLHEAAA"
     gene            1340..>1704
                     /locus_tag="VHN20_16165"
     CDS             1340..>1704
                     /locus_tag="VHN20_16165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018324577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF488 domain-containing protein"
                     /protein_id="HEX2727357.1"
                     /translation="MAVEAFTIGFTQTTAQNFFDRLLRAGVRKVVDVRLHNTSQLAGF
                     AKADDLGWFLKTIGGIGYVHMPLLAPTDAMLTDFKKRRGDWGVYQGRFLELMAERRIE
                     EQLAPNMFDGACLLCSEATP"
BASE COUNT          268 a          608 c          579 g          249 t
ORIGIN      
        1 cctcacgacc gcgccgtcgg cgcaaccgtg aagcgcgtcc cggcgttggt gtccatatcg
       61 atggaggagg gcatgcgctt cacgttcacc accgccgtct gcctggcgct cgccggcgcg
      121 ccggccgccg cattggcgca aacgtcgggc ggcgcgtccg gcggcagcgc cgggggcacg
      181 tccggcggca ccgcgtcggg gtcgtcggga ggcatctcat cgggcgcccc gggcaccacg
      241 tcgccgagcg gcaccatcgc cgcgccctcg ggtgcgaccg gcccgaatgt cagcggctcg
      301 gcgatcggcg gcggcgcgtc gcccggtgcg cagaccggca atccgtcggc ttcgccgtcc
      361 ggagcgagcc cggcgggcgc gcaggccggc aaccccgcag caacgccgtc cgggagcccg
      421 gccgggacgc aatccggcaa ccccgcggcg ccgcccctcg gcacggcgag cgcgccgcgg
      481 ggcggcacgg ccccgccggc catcaccggc agcacgtcgg gcagcctcac caaccaggcc
      541 ggagccgcct cgagcggcgg ctcgcccggc gcccgccccg aaaccgacaa ggagcgccag
      601 gcgcaggagc gcatgcgccg cgccacggag ggaatctgca cggggtgctg agggctgacc
      661 ctgtcatcac cgggcttgtc ccggcgatcc cgctacggat ggcgccgcac tcagagtgtc
      721 atgaccgggc ttgtcccggt catcccgata cgaagggctg cacctttccg atcgagatgg
      781 ccgggacagg cccggccatg acacgctgaa ggagaaggag agggtagggc cgggctcagg
      841 cggccgcttc gtggagcaac gcgagctgac cctcgacggc gcgaatcttc gtcatcacgc
      901 ggtcgagttc ggtcatcagg ccctgctcct cctcgacggc ccgcgccacg tcggcggggt
      961 cggggctgta gcgctgccgg tgcacggcag ccctgatctt gagctcgaga cggtattgct
     1021 gcgcatcgag gctggccagc tgctccgaaa gcctgacctc gtccgccgtc acgacatgcc
     1081 acatcgcttt caagccgcaa ctcccttggc ctgaattgtc caattggttc aacacgtaac
     1141 tgattcgtaa acaaaagcac acggcatcgc gtgtgatttg tccagcgttt ccgtggcggt
     1201 tgtcagattt cgacgccgtg cacggctacg cttgagcggc tcgcacccgg ccgggttcac
     1261 ccgagcgcct gcctccgaat gcctaggtag gcggggcgtg caagattgcc ataggtgggg
     1321 tgaaaccggg agactcggca tggcagttga ggcctttacc atcggcttca cgcagaccac
     1381 ggcgcaaaac ttcttcgacc ggctcttgcg cgccggcgtg agaaaggtcg tcgacgtccg
     1441 gctgcacaac acctcccagc tcgccggctt cgccaaggcg gacgacctcg gctggttcct
     1501 gaagacgatc ggcggcatcg gctacgtgca catgccgctg ctggcgccga ccgacgccat
     1561 gctgaccgat ttcaagaagc gccgcggcga ctggggcgtc taccagggcc gcttcctcga
     1621 actcatggcg gaacgcagga tcgaggagca gctcgcgcca aacatgttcg acggcgcctg
     1681 cctgctctgt tccgaagcga cccc
//
LOCUS       DATAIQ010000984         1668 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_215892, whole genome shotgun sequence.
ACCESSION   DATAIQ010000984 DATAIQ010000000
VERSION     DATAIQ010000984.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1668)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1668)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1668
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_215892"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            9..833
                     /locus_tag="VHN20_16170"
     CDS             9..833
                     /locus_tag="VHN20_16170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007592497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor protein MotB"
                     /protein_id="HEX2727358.1"
                     /translation="MARKKRGGGHGGHGWFVTFADLMALLMSFFVMVAAYSTQDQKKL
                     QLVAGSMRDAFGVARESRFAGIIEQDGLPTRTRLKSPQQTSPENASDQTRPFDTDAMI
                     DGLANAQHRGMTLAVATLRQAMQDMPEIADLSKQIIIEETRDGVNVSLVDQDGRSMFP
                     EGSAQPYDRTRRVLERLALTIRRMPNRVAVTGHTAAPRPGVRSFGSSWDLSAGRSMSV
                     REILASNGVPDDRFASVTGKADTEPMFPDNPYLAANRRVTITLLREAPPIPVGQRP"
     gene            complement(910..1197)
                     /locus_tag="VHN20_16175"
     CDS             complement(910..1197)
                     /locus_tag="VHN20_16175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012331877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727359.1"
                     /translation="MRKIVPEDRVRQGPKGWPVLLVLVGSFLLIGLYLVSLLVWSGAE
                     SPPHPSQAASQQATSRPESSNTAQTPPANPAYPAPASPSATGSTTPSQPAR"
BASE COUNT          275 a          549 c          549 g          295 t
ORIGIN      
        1 acagcccttt ggcccggaag aagcgcggcg gcggacatgg tggtcacggc tggttcgtga
       61 cctttgccga cctcatggcc ctgctcatga gcttcttcgt gatggtcgcc gcctattcga
      121 cgcaagacca gaaaaagctt cagctggtcg ccggctcgat gcgtgacgcc ttcggcgtcg
      181 cgcgcgaaag ccgcttcgcg ggcatcatcg agcaggacgg cctgccgacc cggacccggc
      241 tcaagagccc gcaacagacc tcccccgaga acgccagcga tcagacgagg ccgttcgata
      301 ccgacgccat gatcgacggg ctcgccaacg cgcagcatcg cggaatgacg ctggccgtgg
      361 cgaccttgcg ccaggccatg caggacatgc cggagattgc cgacctgtcg aagcagatca
      421 tcatcgagga gacccgggac ggcgtaaatg tctcgctggt cgaccaggat gggcgctcga
      481 tgttcccgga aggctccgcc cagccgtacg accgcacccg ccgggtcctc gagcggctgg
      541 cgctgaccat acgccgcatg ccgaaccgcg ttgccgtgac gggccatacc gcggcgccgc
      601 gtcccggcgt gcgcagcttt ggatcgtcgt gggacctttc ggcggggcgc tccatgtcgg
      661 tccgcgagat cctggccagc aacggcgtgc ctgacgaccg cttcgcgtcg gtgaccggca
      721 aagccgatac cgagcccatg tttccggaca atccttatct cgccgccaac cgccgggtca
      781 cgatcaccct tctgcgggaa gcgccgccga tcccggtcgg ccagaggcct tgagcgtcac
      841 cagggcgcgc atgcgctgcc cgcgggccgg ccgccaaagg ccgcctcgga atggccgatt
      901 gcagccctgc taccgtgcgg gctggctcgg cgtcgtcgat ccggtggccg acgggctcgc
      961 cggagccgga taggcggggt tggccggagg cgtctgcgcc gtattggagg attcgggccg
     1021 tgaggtcgcc tgctgagagg cggcctggct cggatgcggc ggcgattcgg cgccgctcca
     1081 gaccaggagg gaaaccaggt aaagcccgat cagcaggaag ctgccgacca gaaccagcag
     1141 caccggccat cctttcggac cctgccggac gcgatcttcc gggacaattt tgcgcatgga
     1201 gctttctgcc tttatcttga tctgacgcga tcgcgcgcct acttggactt attcttcaaa
     1261 cgcgagcatc gccggcttgt tccggaactc gccccctgag ccaggagttg cggtcagcga
     1321 ccgttcagca cgggggccga gttattctgc gccgttcccg acgatcgcaa aagttaacgg
     1381 atcgttgtcg acggccaggg acgggatggt aggttggcgg ctgattcgca ggttgcgacc
     1441 aacgtcattc tatcccgctt cattgttttg ccctgcgcgc gtgagcctag gagaggtcat
     1501 gctcgattca cgtatcagtc ttgatggagg ctgggacttc ctgcacgtgg cggacgaccg
     1561 tttgtccggc ccagcggagg tgcgcgccat cacggtgccg agcccgtggc aggcgcaatt
     1621 ctccgatctg cgcatgcgcg ctggcatcgg catttatcgg cgcaccat
//
LOCUS       DATAIQ010000985         1847 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_164382, whole genome shotgun sequence.
ACCESSION   DATAIQ010000985 DATAIQ010000000
VERSION     DATAIQ010000985.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1847)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1847)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1847
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_164382"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            199..1641
                     /locus_tag="VHN20_16180"
     CDS             199..1641
                     /locus_tag="VHN20_16180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase D-like domain-containing protein"
                     /protein_id="HEX2727360.1"
                     /translation="MRIVSPGRNCWRVVEARRAAVLIDGGPYFAHLEDALRQARRSIL
                     IIGWDFDGRIRLRPDVDPETSPPLGQLLRSLVEARPELEIRILVWSVAVIHAPGAPLP
                     LLFGADWQEHPRIHVKLDTHHPKYAAHHQKIVCIDEALAFVGGIDLTVRRWDRQSHLA
                     RDPARLSPEGEPYNPVHDIQMVVDGAAARAMCSLGRSRWRNATGEELGDCQPNEGLWP
                     SALAPQFSHAPVAVARTQPAWCDAPAVMEAAVLTTDALRAAQRMIYIEAQYMTAPYVG
                     DVLAESLARKTGPEVIVLMTHQSRGLLERLIMGRNRARLIRRLKRADRFNRLRVYYPV
                     VPGSDGEQQVMVHSKLIIVDDLFIRVGSSNLNNRSVGLDTECDLAVEATTDTARAAIA
                     SILRQLVAEHIDADPAMVAEAIAATGSVIGAIERLNTRPRGLRLFEAMTEAGPAWPVF
                     GTGLLDPEQPFAPFRFLRRGKRSKRAAASA"
     gene            complement(1662..>1847)
                     /locus_tag="VHN20_16185"
     CDS             complement(1662..>1847)
                     /locus_tag="VHN20_16185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012330868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0104 family protein"
                     /protein_id="HEX2727361.1"
                     /translation="IESVVTYLLPGTEVIGALIVFRFVYFLAPLAIGCVVFAVTELAF
                     RRKGRAEGARVLKTATP"
BASE COUNT          285 a          654 c          629 g          279 t
ORIGIN      
        1 aacttcgacc taaagctccg gcttggttcg atggacccga tccgcctcga gatcattcta
       61 cgcgagcagg gtccgaatct cctgagatcc ggggcacggt gccgccggac gagcctgtgg
      121 cgtagcggca tgcgttgtcc cgaacccgcc ttcgaccggc ctgagctgca ctccgatgcc
      181 tggacggcag gcgccgcgat gcgcatcgtc agtcccggac ggaactgctg gcgcgttgtt
      241 gaggcgcgcc gggcggcggt cctcatcgac ggtgggccgt atttcgccca tctcgaagac
      301 gcgctccggc aggcccggcg gtcgatcctg atcatcggct gggatttcga cggccgcatc
      361 cgcctgcggc ccgacgtcga tccggagacg tcgccgccgc tcgggcagct cttgcggtcg
      421 ctggtcgagg cccgccccga gctcgagatc cgcatcctgg tgtggagcgt cgccgtcatt
      481 cacgcgcccg gcgcgccgct accgctcctg ttcggcgccg attggcagga gcatccgcgc
      541 atccacgtca agctcgatac gcaccacccg aaatacgccg cgcatcacca gaagatcgtg
      601 tgcatcgacg aggcgcttgc cttcgtcggc ggcatcgacc tgacggtgcg gcgatgggac
      661 cgccagtccc atctcgcgcg cgatccggcg cggctcagcc ccgaaggcga gccgtacaac
      721 cccgtgcacg acatccagat ggtggtcgac ggcgcggcgg cgcgggcgat gtgctccctc
      781 gggcggtcgc gctggcgcaa cgcgacgggc gaggagctgg gcgattgcca gcccaacgaa
      841 ggcttgtggc cctcggcgct cgcgcctcaa ttcagccatg cgccggttgc ggtcgcgcgc
      901 acgcagccgg cctggtgcga cgcgcccgcc gtcatggaag cggccgtgct gacgacggac
      961 gcgctgcgcg cggcgcagcg catgatctac atcgaggcgc agtacatgac ggcgccctat
     1021 gtcggcgatg tcctggccga gagcctcgcc cgcaagaccg ggcccgaggt gatcgtgctg
     1081 atgacgcacc agtcgcgcgg cctgctcgaa cgcctgatca tgggcaggaa ccgcgcccgc
     1141 ctgatccgcc gcctcaagcg ggcggatcgc ttcaaccgcc tgcgcgtcta ctacccggtc
     1201 gtgccgggaa gcgacggcga gcagcaggtg atggtgcatt ccaagctcat catcgtcgac
     1261 gacctgttca tccgcgtcgg gtcgtcgaac ctcaacaacc gctcggtcgg cctcgacacc
     1321 gaatgcgatc tcgcggtgga ggcgaccacg gatacggcgc gcgcggcgat cgcgtccatc
     1381 ctgcgccagc tcgtggccga acatatcgac gcggatccgg cgatggtcgc ggaggcgatc
     1441 gcggcgaccg gctcggtcat cggcgcgatc gagcgcctga acaccaggcc gcgcggcctg
     1501 cgcctgttcg aggccatgac cgaagcgggc ccggcgtggc cggtcttcgg caccgggctt
     1561 ctcgatcccg agcagccgtt cgcgccattc cggttcctgc gccgaggcaa gcggtcgaag
     1621 cgcgcagccg ccagcgcctg accccccggg gacgggcacg cctaaggggt tgcggtcttc
     1681 agcactcgcg ccccttcggc ccgtcccttg cgccggaagg ccagctcggt gaccgcgaac
     1741 acgacgcagc cgatggccag cggcgcgagg aagtagacga agcggaacac gatcagcgca
     1801 ccgatgacct cggtcccggg cagaagatag gtgacgacgc tttcgat
//
LOCUS       DATAIQ010000986         1506 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_164421, whole genome shotgun sequence.
ACCESSION   DATAIQ010000986 DATAIQ010000000
VERSION     DATAIQ010000986.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1506)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1506)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1506
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_164421"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..244
                     /locus_tag="VHN20_16190"
     CDS             <1..244
                     /locus_tag="VHN20_16190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019195787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HEX2727362.1"
                     /translation="EVFPGIATKGVAGYRGIKLLRREVGAEVEFVTIMWFDSWDAVKA
                     FAGDDHEAAYVPAKARAVLARFDGRSQHYEIRDSRD"
     gene            complement(285..1061)
                     /locus_tag="VHN20_16195"
     CDS             complement(285..1061)
                     /locus_tag="VHN20_16195"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEX2727363.1"
                     /translation="MILSDLAHALGLNAPTLPMLLTAALLGGLVRGFTGFGFAMVFVP
                     LATMVVGPVKAIALVWSIDAPFALPLGARAARKAQWSEVVPLLVGATALLPAGVWLLT
                     RLDPVLMRWIIALLILAAVTALASGWRYHGRPGLGLSLGVGGLSGLAAGLASIGGMPV
                     ALFWLGSQRNDAAQTRHNFIAYLALSTVPSGIVFAWNGVLTLAVFGEALVLLVPYGIG
                     LFLGTHGFHRASEVTFRRIAYAVIASAATLSLPLLDRWLR"
     gene            1109..>1506
                     /gene="ruvC"
                     /locus_tag="VHN20_16200"
     CDS             1109..>1506
                     /gene="ruvC"
                     /locus_tag="VHN20_16200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008821 - crossover junction DNA
                     endonuclease activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HEX2727364.1"
                     /translation="MPIPVRILGLDPGLRRTGWGLVSIEGTRLSFLSCGIVTSEQAAP
                     LAVRLTQLHDGLARVVHDLAPDEAAVEETFVNKDAQATLKLGHARGIALLVPALAGLP
                     VSEYAANLVKKTVVGSGHAEKRQIHAMVRVL"
BASE COUNT          262 a          525 c          535 g          184 t
ORIGIN      
        1 ggaggtcttt ccgggcatcg ccaccaaggg cgtcgctggt tatcgcggca tcaagctgct
       61 gcgccgggag gtcggcgcgg aagtcgagtt cgtcaccatc atgtggttcg actcgtggga
      121 tgcggtcaaa gccttcgccg gcgacgatca cgaggcggcc tacgtgccgg ccaaggcccg
      181 cgcggtgctg gcgcgcttcg acggccgctc gcaacattac gagatccgcg acagccgcga
      241 ctaaccccgc ggaatccctc tccccgcaag cgggacgcgg tgcgtcaccg cagccagcga
      301 tcgagcaacg gcagggacag cgtcgcggcc gaagcgatca ccgcgtaggc gatgcggcgg
      361 aaggtgacct ccgaggcgcg gtggaaaccg tgcgtgccga ggaacaggcc gatcccgtaa
      421 gggacgagca ggaccagcgc ctcaccgaac accgcgagcg tcagcacgcc gttccatgcg
      481 aagacgatgc cggacggcac cgtcgagagg gcgaggtagg cgatgaagtt gtggcgcgtc
      541 tgcgccgcgt cgttgcgctg gctgccgagc cagaacagcg cgaccggcat gccgccgatg
      601 ctggcgaggc ccgcggccag cccggacagc ccgccgacgc ccagggacag gccgagcccc
      661 gggcggccat gataccgcca gcccgatgcg agcgcggtga cggcggcgag gatcaggagc
      721 gcgatgatcc agcgcatcag cacagggtcg aggcgcgtca gcagccacac gccggccggc
      781 aggagggcgg tggcgccgac gagcagcggc acgacctccg accattgcgc cttgcgggcg
      841 gcgcgcgcgc cgagcggcag cgcaaacggc gcgtcgatcg accagacgag cgcgatcgcc
      901 ttcaccgggc cgacgaccat cgtcgcgagc ggcacgaata ccatggcgaa gccgaagccg
      961 gtgaagccgc gcaccagccc gccgagaagc gccgcggtca gcagcatcgg caaggtcggc
     1021 gcgttcagac caagggcgtg cgcgagatcg gagaggatca tgggacgtca gcagtagcca
     1081 cgtttggccg cgcggactac tgaggggcat gccgattccc gtccgaatcc tcggcctcga
     1141 tcccggcctc cgccgcaccg gctggggcct cgtcagcatc gaaggcacgc gcctgtcctt
     1201 cctgtcctgc ggcatcgtca cctcggagca ggcggcgccc ctcgccgtgc gcctcacgca
     1261 attgcacgac ggcctcgcgc gcgtggtcca tgacctcgcg ccggacgagg ccgcggtgga
     1321 agagaccttc gtcaacaagg acgcgcaggc caccctcaag ctcggccatg cgcgcggcat
     1381 cgccttgctc gtgccggcgc ttgccggcct gcccgtgtcg gaatacgccg cgaacctcgt
     1441 caagaagacc gtggtcggct ccggccacgc cgagaagcgg cagatccatg cgatggtgcg
     1501 cgtgct
//
LOCUS       DATAIQ010000987         3501 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_261833, whole genome shotgun sequence.
ACCESSION   DATAIQ010000987 DATAIQ010000000
VERSION     DATAIQ010000987.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3501)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3501)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3501
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_261833"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(27..1406)
                     /locus_tag="VHN20_16205"
     CDS             complement(27..1406)
                     /locus_tag="VHN20_16205"
                     /inference="COORDINATES: protein motif:HMM:NF017736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF882 domain-containing protein"
                     /protein_id="HEX2727365.1"
                     /translation="MPRGVGRAVLGLVIAAAAVVSGTRGTQDANANGDNRTLTLFHTH
                     RNESATITFKRNGRYDPEGLTQLNWFLRDWRSDETAKMEPRLFDIVWEVYREVGAREP
                     IHILSAYRSPQTNAMLRRRSRGVSEHSLHMSGKAMDFRLPDADMGRVRAIAMRLQHGG
                     VGYYPGSNFVHLDAGSVRAWPRMTYDQLARLFPDGKTVHLPANGKPFARYEEARAEIM
                     SRGGAVTSYASVEAESTGRKSLWATLFGGDDEDTEFYRAQGRRGGPRSAAYAPAGSDE
                     GRIVLARSSADAPAAEAAPSAGAPSPAPSAATLDLPGQTLGYAPMPPRRPDAMTVLTA
                     LMDAPLPPQRPVQVAAAGMLPLRSADVATTAAVNLAPRPGFAPDERAALRALFATVAN
                     DSKPLPRVQLPRVQVVTSRARPLPLAPGVMVADLGPTLNLRLSANPTGDLSTTRFTGP
                     AVKFLTLVR"
     gene            complement(1775..>3501)
                     /locus_tag="VHN20_16210"
     CDS             complement(1775..>3501)
                     /locus_tag="VHN20_16210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015926973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HEX2727366.1"
                     /translation="TSPAPAQGDLGVPAQEKATQAAPAPDRATEAAPTAPGTVNPDAP
                     TTAAIPADPLGEALAARLADGKAALHPRLGRKDREAMAAFYAIGGYQMLWLKDGAWTA
                     PAQALIRQIKNAAEEGLEAADYPIPVPPGREAAPAAVADAELKLSAAAVAYARDARGA
                     RIEPSRLSNLITPKLELPAPDAVLTSLAAAADAGAALSAYNPPHAGYRALRDKLAQLR
                     ANRPSPGAVRVPQGPALKVGMRDARVRLIRARFGLGGDDTAYDERVAAAVADFQREKG
                     LPADGVLDRKTVSALSGPAPSVTEEDVLSNMERWRWLPADLGRRHIWVNVPEYRLRLM
                     TNGRPVYEARVIVGKPDTPTPLFSDEMDHAIVNPSWYMPPSIFKNEFNSDPAYAAARG
                     FEVKRGRDGGITVRQPPGERNALGLVKFMFPNRHAVYLHDTPNRRLFAADKRAFSHGC
                     VRLDQPFRFGEMVLGPQWTEARLKSLIGNGERTIKLPEKIPVHITYFTLQIDEKGGVH
                     RAADLYGVNNKVRVALGLSRDPMVVVESPRPAPRPQAAARKRTKPVQTVVQAPAPLQP
                     QQFWWFTR"
BASE COUNT          485 a         1148 c         1334 g          534 t
ORIGIN      
        1 ggcgcgccgg ctttgccggg cgaagatcag cgcacgaggg tcaggaattt taccgccggc
       61 cccgtgaagc gggtggtgga gagatcgccg gtcgggttgg ccgagaggcg caggttcagc
      121 gtcgggccga gatctgcgac cattacgccc ggagccagcg gcaacggcct ggcgcggctc
      181 gtcacgacct gcacgcgcgg cagctgcacc cgcggcaacg gcttgctgtc gttggccacg
      241 gtcgcgaaca gggcgcgaag ggcggcgcgc tcatccggag cgaagccagg cctcggagca
      301 aggttgaccg cggcggtggt cgcgacatcg gctgagcgca gcggcagcat gccggccgcg
      361 gccacctgca cgggccgctg cggcggcagc ggcgcatcca tgagggccgt gagcacggtc
      421 atcgcgtcgg ggcggcgcgg cggcatcggc gcgtagccga gcgtctgacc gggcaggtcg
      481 agcgtcgccg ctgagggtgc cgggcttggc gccccggctg acggggctgc ctccgcggcg
      541 ggcgcatcgg cgctgctgcg cgccagcacg atgcggcctt cgtcggaccc ggcaggcgca
      601 taggcggcgc tccgggggcc cccgcgcctg ccttgcgcgc gatagaattc ggtgtcctcg
      661 tcgtcgccgc cgaacagggt cgcccacagg ctcttccgcc ccgtggactc ggcctcgacg
      721 gaggcatagc tggtcacggc gccgccgcgc gacatgatct cggcgcgagc ctcctcgtag
      781 cgggcgaaag gcttgccgtt ggcggggaga tgaactgtct tgccgtccgg gaacaggcgc
      841 gcaagctggt cgtaggtcat gcgcggccac gcgcgcacgc tgccggcgtc gaggtgaacg
      901 aaattgctgc ccgggtaata cccgacgccg ccgtgctgca gccgcatggc gatggcgcgc
      961 acgcggccca tgtcggcatc gggcaggcgg aaatccatcg ccttacccga catgtgaagg
     1021 ctgtgctcgg agacgccgcg cgaacggcgg cgcagcatgg cattggtctg cggcgaacgg
     1081 taggcggaca ggatgtggat cggctcgcgc gcgcccacct cgcggtagac ctcccagacg
     1141 atgtcgaaga ggcgcggctc catcttggcg gtctcgtcgc tgcgccagtc gcgcaggaac
     1201 cagttcagct gggtgagacc ctcggggtcg tagcggccat tgcgtttgaa ggtgatggtg
     1261 gcgctctcgt tccggtgcgt gtggaacagg gtgagcgtgc ggttgtcacc gttggcgttg
     1321 gcgtcctggg tgcccctggt gcctgaaacg acggcggccg cagcgatgac gaggccgagc
     1381 acggcacggc cgacgcctct cggcacggcc catcgacggc cattcgacgc aacttccaag
     1441 atgcggcccc cgtgcggcca acctcaacgc cattcgagtt gttatcgaga acggttattg
     1501 ccccgttaag cggcgctcag tcagccctgg ttttagcgtt accgtcgcgg cctagggctg
     1561 aaccgtggcg aaattgcgcc tgcgccgcga acccgcggcg cgcgcttgcc gccagttgcc
     1621 gtggtgcaac gcggggcggt gtgatggcat ggcggcgcag gcccggcaga gcggatcgca
     1681 ggtcgctcgg gcgccgcttc tttgaggctc gtgataggag gcgtttccgg cgaggccggc
     1741 ccgggtcagc ccgggccggc cgtcgcggag cctgtcagcg ggtgaaccac cagaactgct
     1801 gcggctgcaa gggtgccgga gcctggacga cggtctggac cggcttggta cgcttgcggg
     1861 ccgccgcctg cggacggggc gccggccgcg ggctttcgac gacgaccatc gggtccctcg
     1921 acaatccgag ggccacgcgc accttgttgt tgacgccgta aagatcggcc gcgcggtgca
     1981 ccccgccctt ctcgtcgatc tgcagggtga aataggtgat gtggaccggg atcttctcgg
     2041 gaagcttgat ggtgcgctcg ccgttgccga tcaggctctt gaggcgggct tcggtccatt
     2101 gcggcccgag caccatctcg ccgaagcgga aaggctggtc gagacgcacg cagccgtggc
     2161 tgaaggcgcg cttgtcggcg gcgaagaggc gccggttggg cgtgtcgtgc aggtagaccg
     2221 cgtgccggtt cgggaacatg aacttgacga ggccgagcgc gttgcgctcg ccgggcggct
     2281 ggcggaccgt gatgcctccg tcgcgcccgc gcttcacttc gaagccgcgc gccgcagcat
     2341 acgcgggatc ggagttgaac tcgttcttga agatcgacgg cggcatgtac caggacggat
     2401 tgacgatggc gtggtccatc tcgtccgaga acagcggcgt cggagtgtcg ggcttgccga
     2461 cgatgacgcg cgcctcgtac accgggcggc cgttggtcat caggcgcagg cggtattccg
     2521 gcacgttcac ccagatatgg cggcggccga ggtcggccgg cagccagcgc cagcgctcca
     2581 tgttggagag cacgtcctcc tcggtcacgc ttggagcggg gcccgacagc gccgagacgg
     2641 tcttgcggtc gagcacgccg tcggccggca ggcccttctc gcgctggaag tcggccacgg
     2701 ctgcggcgac gcgctcgtca taggcagtgt cgtccccgcc gaggccgaaa cgggcgcgga
     2761 tcaggcgcac gcgtgcatcg cgcatgccga ccttgagcgc cggaccctgc ggcacgcgca
     2821 cggcgcccgg ggacggccgg ttggcgcgca gctgagccag cttgtcccgc aaggcgcgat
     2881 agccggcatg gggaggattg taggcggaca gggccgcgcc ggcatctgcg gccgcagcga
     2941 ggctcgtgag aaccgcgtcc ggcgccggca actcgagctt cggcgtgatc agattcgaga
     3001 ggcgcgacgg ctcgattcgt gcgccgcggg catcgcgggc gtaggccacg gccgcggcgc
     3061 tcagcttgag ctcggcgtcg gcaacggcgg ccggcgccgc ctccctaccg ggaggcaccg
     3121 ggatcgggta gtcggcggct tcgaggccct cctcggcggc gttcttgatc tgtcggatca
     3181 gcgcctgggc gggcgccgtc caggcgccgt ccttgagcca gagcatctgg tagccgccga
     3241 tcgcataaaa agcggccatg gcctcccggt ccttgcgccc gaggcgggga tgcaaggcgg
     3301 ccttgccgtc cgcgagccgg gccgccaggg cttccccaag cggatcggcg gggatcgcgg
     3361 ccgtcgtggg agcatccgga ttgaccgtgc cgggcgcggt cggggcagct tcggtcgccc
     3421 ggtccggggc cggcgccgcc tgggtagcct tttcctgggc gggcacgccg agatcgccct
     3481 gagccggggc ggggctggtc g
//
LOCUS       DATAIQ010000988         1511 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_261905, whole genome shotgun sequence.
ACCESSION   DATAIQ010000988 DATAIQ010000000
VERSION     DATAIQ010000988.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1511)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1511)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1511
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_261905"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1179)
                     /locus_tag="VHN20_16215"
     CDS             complement(<1..1179)
                     /locus_tag="VHN20_16215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016552143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HEX2727367.1"
                     /translation="MDVLANLALGMGVALRPENLGFCFLGTLLGTLVGVLPGIGPVTT
                     VAILLPITFVLSPVAALIMLAGIYYGAQYGGSTTAILIRIPGEASSVVTAIDGHEMAK
                     QGRAGAALGVAAIASFFAGCVATLLIAFAAPVLANIALQFGPAEYFSLMVCGLVAAVV
                     LAHGSLVKAIAMVLIGLLLGLVGTDVNSGVRRFTMGFQPLADGIEFVALSMAIYGIAD
                     VAHNLEQREKVAAMSARVGSIWPTWSEIRHCTPTILRGTGLGSLLGVLPGGGALLAAF
                     AAYTVEKKVARPPRRFGQGDIRGVAGPESANNAGAQTSLVPMLTLGIPSNPTMAMMIG
                     ALMIHGISPGPRVMTDRPDMFWGLIASMWIGNLMLVVLNLPLVGLWVRLLQIPYRFLF
                     P"
     gene            complement(1187..>1511)
                     /locus_tag="VHN20_16220"
     CDS             complement(1187..>1511)
                     /locus_tag="VHN20_16220"
                     /inference="COORDINATES: protein motif:HMM:NF018979.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter TctB
                     family protein"
                     /protein_id="HEX2727368.1"
                     /translation="FPSLLALVLGGVGAVLIARSFYIEGARIAVLRPGPLAVLVAAIV
                     LFGALINWLGLVIAGALATLIGARAGPDFRIGESVALAVVLVAFSVAVFAYALGLPLK
                     LWPGP"
BASE COUNT          299 a          509 c          535 g          168 t
ORIGIN      
        1 cgggaacagg aagcgatacg ggatctgcag aagacgcacc cacagcccga cgaggggcag
       61 gttgaggacg accagcatca ggttgccgat ccacatgctg gcgatcagcc cccagaacat
      121 atcggggcgg tcggtcatga cgcgcggccc gggcgagatg ccgtggatca tgagcgcgcc
      181 gatcatcatg gccatggtcg ggttcgacgg gatgccgagc gtcagcatcg gcacgaggga
      241 ggtctgcgcg ccggcgttgt tggccgattc cgggccggcg acgccgcgga tgtcgccctg
      301 gccgaagcgg cgcggcgggc gcgccacctt cttctcgacc gtgtaggcgg cgaatgccgc
      361 cagcagcgcc ccgcctccgg gcagaacccc gagcagcgag ccgagcccgg tgccgcgcag
      421 gatcgtcggc gtgcaatgcc ggatctcgct ccaggtcggc cagatcgatc cgacgcgcgc
      481 cgacatggcc gcgaccttct cgcgctgctc gagattatgg gccacgtcgg cgatgccgta
      541 gatcgccatc gacagcgcga cgaactcgat gccgtcggca agcggctgga agcccatggt
      601 gaagcggcgc acgcccgaat tgacgtccgt gccgacgagc ccgagcagca ggccgatgag
      661 gaccatggca atcgccttca ccagcgagcc gtgggccagc accacggcgg cgaccagccc
      721 gcacaccatc agcgagaaat actcggccgg cccgaattgc agcgcgatgt tggcgaggac
      781 cggcgccgcg aacgcgatca gcagggtggc gacgcatccg gcgaagaacg aggcaatggc
      841 ggcgacgccg agcgcggcgc cggcccgccc ctgcttggcc atctcgtgcc cgtcgatggc
      901 cgtgaccacc gacgacgcct cgcccggaat ccggatcagg atcgccgtcg tcgagccacc
      961 atattgggcg ccgtaataga tgcccgccag catgatcagc gccgccaccg gcgacagcac
     1021 gaacgtgatc ggcaggagaa tggcgacggt ggtcacggga ccgatgccgg gaagcacgcc
     1081 gacgagggtg ccgagcagcg tgccgagaaa gcagaatccc agattctcag ggcgcagggc
     1141 gacgcccatg ccgagcgcga gattggcaag cacgtccatg ctgcgcctac ggacccggcc
     1201 agagcttcaa gggaagcccg agcgcgtacg cgaacacggc taccgagaag gcgacgagca
     1261 ccacggccag cgcgacgctt tcgccgatgc ggaaatcggg cccggcacgg gcgccgatca
     1321 gggtcgccag agcccccgcg atcacgagcc cgagccagtt gatcagggct ccgaacagga
     1381 cgatggccgc gaccagcacg gccagggggc cgggccgaag aacggcaatg cgcgcgccct
     1441 cgatatagaa cgagcgcgcg atcagcacgg cgccgacgcc gccgaggacg agcgcgagga
     1501 gagacgggaa a
//
LOCUS       DATAIQ010000989         4265 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_354001, whole genome shotgun sequence.
ACCESSION   DATAIQ010000989 DATAIQ010000000
VERSION     DATAIQ010000989.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4265)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4265)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4265
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_354001"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            182..1492
                     /gene="gltA"
                     /locus_tag="VHN20_16225"
     CDS             182..1492
                     /gene="gltA"
                     /locus_tag="VHN20_16225"
                     /EC_number="2.3.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018391184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004108 - citrate (Si)-synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="citrate synthase"
                     /protein_id="HEX2727369.1"
                     /translation="MNYNLSTNPTTATLVADNKKLDAPVKPGTIGPSVIDISKLYAAT
                     GMFTYDPGFTSTASCESKITYIDGDEGILLYRGYPIEQLAEHGDFLETCYLLLYGELP
                     TAAQKADFDYRVTRHTMVHDQMHRFFQGFRRDAHPMAVMVASVGALSAFYHDSTDISD
                     PQQRMVASMRMIAKTPTLAAMAYKYSVGQPFIYPKNDLDYTSNFLRMCFAVPCEEYKV
                     NPVLARALDRIFILHADHEQNASTSTVRLAGSSGANPFACIAAGIACLWGPAHGGANE
                     AALKMLEEIGTPERIPQYIGKAKDKNDPFRLMGFGHRVYKNYDPRARIMQKTCHEVLN
                     ELGIKDDPLLDVAIELEQIALKDEYFLEKKLYPNIDFYSGITLKAMGFPTSMFTVLFA
                     VARTVGWIAQWKEMIEDPSQKIGRPRQLYVGAPSRDYLTIAQRG"
     gene            complement(1708..2895)
                     /gene="lpxB"
                     /locus_tag="VHN20_16230"
     CDS             complement(1708..2895)
                     /gene="lpxB"
                     /locus_tag="VHN20_16230"
                     /EC_number="2.4.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010682852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008915 - lipid-A-disaccharide synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase"
                     /protein_id="HEX2727370.1"
                     /translation="MSDVAPRPLSIWLVAGEESGDQLGAKLMRALKANCADRGVTFAG
                     VGGHAMEDEGLKVLFPVSDIAMMGIGAVVAHLPRLVRRVYSAVDAIVAAQPDAVVIID
                     SPEFTHAIAKRVRRRLPSLPIVNYVSPSVWAWRPGRARRMRAYVDHVLALKPFEPEAH
                     ERLGGPPCTYVGHPLIERLAELRPRPGERAPLHEDPVNLLVLPGSRRSEISRLMEPFG
                     AALELLAARSPRPLRVVVPAVAHLADEIQLGARDWPVPIEVVRGEAAKYAAFRTAHAA
                     LAASGTVTLELALSGIPMVVAYKVSKLEEQLRYLIKVPSIVLANLILGDNVIPERVQW
                     DCTPDKLVEALLPLLDDTPERRRQVEAFTRLDELMSIGKEAPSERAARLVREAIKGDG
                     ASA"
     gene            complement(2892..3755)
                     /gene="lpxI"
                     /locus_tag="VHN20_16235"
     CDS             complement(2892..3755)
                     /gene="lpxI"
                     /locus_tag="VHN20_16235"
                     /EC_number="3.6.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012456909.1"
                     /note="LpxI, functionally equivalent to LpxH, replaces it
                     in LPS biosynthesis in a minority of bacteria; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase LpxI"
                     /protein_id="HEX2727371.1"
                     /translation="MQPQTGPIAILAGSGQFPVLLAEALRRTGRPCRILAFRGFADAA
                     LRKQADVTVDLLDVKRTLACLSEWEPSAVTLAGGVRRPGPAAVLSAFSLLRNRRELMD
                     LMARGDDRLLRGVIDLLEEHGHRVIGVHDLAPELLAEPGVQGVHRPSAEDERTIAVGM
                     GLLRHISRYDVGQAAVLVDERVLAIEGPEGTDRMLARVRRLRRSWFFARTPVAGVLVK
                     SPKQDQDLRVDLPAIGPLTAARAAKAGLRGIAVVSGATLILDRDKTVRAADRLGLFVV
                     AVEPFGEPVAA"
     gene            complement(3755..>4265)
                     /locus_tag="VHN20_16240"
     CDS             complement(3755..>4265)
                     /locus_tag="VHN20_16240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003603893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="acyl-[acyl-carrier-protein]--UDP-N-
                     acetylglucosamine O-acyltransferase"
                     /protein_id="HEX2727372.1"
                     /translation="QGTMATIVGDRCFFLANSHVAHDCRVGSNVVLTNNVMLTGHCKI
                     GDFAIIGGGAGIHQFVRVGPHAFIGGLSGVENDVIPYGMVLGNRAHLAGLNIVGLRRR
                     GFSREQIHDLRRAYRLLFANEGTLAERVEDVAEEFAKHPIVHEILDFIRDGNDRAICT
                     PRETASVAA"
BASE COUNT          744 a         1483 c         1380 g          658 t
ORIGIN      
        1 accatgcgac ccgaaaagga ggcaggtcga tcgcttcgat ccggcgcgac cccgccccgg
       61 gcgagcttga acgccggggg cggataagct accgaagcgc cgtgtttcca aagcccacgc
      121 ggccgggcag gccgggcacg accagcgcct gcgggggtat tccggtgaaa ggccaggttt
      181 gatgaactac aatctcagca cgaatccgac cacggccaca ctcgtggccg acaacaagaa
      241 gctcgatgcc ccggtgaagc ccggcacgat cgggccgagc gtcatcgaca tttcgaagct
      301 ctacgccgcc accgggatgt tcacctacga tcccggcttc acctcgaccg cgagctgtga
      361 atcgaaaatc acctatatcg acggcgacga aggcatcctc ttgtatcggg gctacccgat
      421 cgagcagctc gccgagcacg gcgacttcct cgagacctgc tacctcctgc tttacggcga
      481 gctgccaacc gccgcccaga aggccgattt cgactaccgg gtcacgcgcc acacgatggt
      541 gcacgaccag atgcaccgct tcttccaggg cttccgccgc gacgcccacc cgatggccgt
      601 gatggtcgcg tcggtcggcg ccctgtcggc cttctatcac gactcgaccg acatctcgga
      661 cccgcagcag cgcatggtcg cctcgatgcg catgatcgcc aagacgccga cccttgcggc
      721 catggcgtac aagtattcgg tcggccagcc gttcatctat ccgaagaacg acctcgacta
      781 cacgtcaaac ttcctgcgca tgtgcttcgc ggtgccgtgc gaggagtaca aggtcaaccc
      841 ggtcctggcg cgcgcgctcg accgcatctt catcctgcac gccgatcacg agcagaatgc
      901 ctcgacctcg accgtgcggc tcgccggctc gtcgggcgcc aacccgttcg cctgcatcgc
      961 cgccggcatt gcctgcctgt gggggccggc gcatggcggc gccaacgagg cggcgctcaa
     1021 gatgctcgag gagatcggca cccccgagcg catcccgcag tatatcggca aggccaagga
     1081 caagaacgat ccgttccgcc tgatgggctt cggccaccgc gtctacaaga actacgaccc
     1141 gcgcgcgcgc atcatgcaga agacctgcca cgaggtgctc aacgaactcg gcatcaagga
     1201 cgatcccctg ctcgacgtcg ccatcgagct cgagcagatc gccctcaagg acgaatattt
     1261 ccttgagaag aagctgtatc cgaacatcga cttctattcg ggcatcaccc tcaaggcgat
     1321 gggcttcccg acgtccatgt tcacggtgct gttcgcggtg gcgcgcacgg tcggctggat
     1381 cgcgcaatgg aaagagatga tcgaggaccc gtcgcagaag atcggccgcc cgcgccagct
     1441 ctatgtcggt gcgccgtcgc gcgactacct gaccatcgcc cagcgcggct gaaccttgca
     1501 gaacgcccgt catcccgggg ggtgccgcga aagcggcgga ccccggaagg cgatgcttgt
     1561 ctgaggggtg cggactcgcg ttcggatatt accggttgcc tgacagggcc gcgaccgtac
     1621 gagacctttc gtcgtcgcgc ctgattcagc ggctccgcac ccggatcggc ctgcgatgtc
     1681 gggaggttcg caccgggttc gaacccgtca ggcgctcgcc ccgtcccctt tgatcgcctc
     1741 ccgcacgaga cgcgcggcgc gctcgctcgg ggcctccttg ccgatggaca tcagctcgtc
     1801 gagccgcgtg aacgcctcga cctgccgccg ccgctcgggc gtgtcgtcga gaagcggcaa
     1861 cagcgcctcg acgagcttgt ccggcgtgca gtcccattgc acacgctccg gaatcacgtt
     1921 gtcgcccagg atcaggttgg ccagcacgat cgacggcacc ttgatcaggt atctgagctg
     1981 ctcttcgagc ttcgatacct tgtaggcgac gaccatcggg atgcccgaca aggcaagctc
     2041 gagggtgacc gtgcccgacg cggcaagcgc cgcatgcgcc gttcggaacg cagcatattt
     2101 ggcggcttcc ccgcgcacga cctcaatcgg caccggccag tcgcgcgcgc ccaactgaat
     2161 ttcgtcggcg agatgggcca cggccggaac gacgacgcgt agcgggcgcg gggatcgggc
     2221 cgccagcagt tccagggcgg cgccgaacgg ctccatcagg cggctgatct cggatcgccg
     2281 gctgcccggc aggacgagca ggttaaccgg gtcttcgtga agaggagccc gctcgcccgg
     2341 ccgcggccgg agctcagcga gacgttcgat caacgggtgc ccgacatagg tgcatggcgg
     2401 gccgccgagg cgctcgtgcg cctcgggctc gaaaggcttc agggccagca catggtcgac
     2461 ataggcgcgc atgcgccgcg cccggcctgg ccgccatgcc cagacgctcg ggctgacgta
     2521 gttgacgatc ggcagcgacg gcagccggcg gcgcacgcgc ttggcgatgg catgcgtgaa
     2581 ttccgggctg tcgatgatca ccaccgcatc cggctgcgcc gcaacgatcg cgtcgaccgc
     2641 gctataaact cgccggacga gccttgggag gtgtgcaacc accgcaccga tgcccatcat
     2701 ggcgatgtcg ctcaccggaa acagcacttt caggccttcg tcctccatgg cgtgcccgcc
     2761 gacgccagcg aacgtgacgc cgcggtcggc gcagttcgcc ttgagcgccc gcatcagctt
     2821 ggcgccgagc tgatcgcccg attcctcgcc ggcgaccagc cagatcgaca acggcctggg
     2881 ggcaacgtcg ctcatgcggc caccggctcg ccgaagggct ccacggcgac gacgaacagg
     2941 ccgagacgat ctgcggcccg gacggtcttg tcgcggtcaa ggatcagcgt ggcgccgctt
     3001 actactgcga tgccgcgcaa cccggctttc gccgcgcgcg ccgccgtcag cggcccgatg
     3061 gccggcaggt cgacgcgcag atcctggtcc tgcttcggcg atttaacgag cacgccggca
     3121 acaggcgtgc gcgcaaaaaa ccacgagcgg cgcagtcggc gcacccgcgc cagcatccgg
     3181 tcggtccctt ccggcccttc gatggcaagc acccgctcat ccacgagaac ggcggcctgc
     3241 cccacgtcgt agcgcgagat atggcgcagc aggcccatgc cgactgcgat cgtccgctca
     3301 tcctctgccg agggccggtg caccccctgg acgcccggtt cggcaaggag ctcgggcgcc
     3361 aggtcgtgca cgccgatgac acggtggcca tgctcctcga gaaggtcgat cacgccgcgg
     3421 agcaggcggt catcaccgcg cgccatgagg tccatgagct cgcgccggtt gcgcagcaac
     3481 gaaaacgcgc tcagcacggc cgcgggcccc ggacggcgaa cgccgccggc cagcgttacg
     3541 gcgcttggct cccattcgct caggcaggcg agcgtgcgct tcacatcgag gaggtcgacg
     3601 gtcacgtccg cctgcttccg cagcgccgcg tcggcgaagc cgcggaaagc aaggatgcgg
     3661 caggggcgcc cggtgcgacg cagggcctcg gcgagaagca ccgggaactg tcccgatccg
     3721 gccagaatgg ctatcggtcc ggtctgcggc tgcatcaagc cgccacgctc gcggtctcgc
     3781 gtggggtgca gatggcgcgg tcgttgccgt cacggatgaa gtcgaggatc tcgtgcacga
     3841 tcgggtgctt ggcaaattcc tcggcgacgt cctcgacccg ctcagcgagc gtgccctcgt
     3901 tcgcgaacag gaggcgatac gcccggcgca gatcgtggat ctgctcgcgg ctgaagccgc
     3961 ggcgccgcag cccgacgatg ttgagcccgg cgagatgggc gcggttcccg agcaccatcc
     4021 cgtacgggat cacgtcgttc tccacgcccg acaggccgcc gataaaggcg tgcggcccga
     4081 cgcggacgaa ctggtgaatc ccggcgccgc cgccgatgat cgcgaaatcg ccgatcttgc
     4141 agtggccggt gagcatcacg ttgttggtga ggacgacgtt gctgccgacg cggcaatcat
     4201 gcgcgacgtg actgttggcg aggaagaagc agcgatctcc gacgatcgtc gccatggtcc
     4261 cttga
//
LOCUS       DATAIQ010000990         3026 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_261963, whole genome shotgun sequence.
ACCESSION   DATAIQ010000990 DATAIQ010000000
VERSION     DATAIQ010000990.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3026)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3026)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3026
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_261963"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..222)
                     /locus_tag="VHN20_16245"
     CDS             complement(<1..222)
                     /locus_tag="VHN20_16245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004448363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HigA family addiction module antitoxin"
                     /protein_id="HEX2727373.1"
                     /translation="MAGNPLLKGLSPTHPGEVLREDVIPALALPKTEIARRLGISRQT
                     LYDILDEKQPVTAAMALRLGKFFGNGPEFW"
     gene            complement(222..500)
                     /locus_tag="VHN20_16250"
     CDS             complement(222..500)
                     /locus_tag="VHN20_16250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018700041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HEX2727374.1"
                     /translation="MIRSFKSKTLRLFAETGDARKLSVPNARRVQRILNELNVAKAPG
                     DMNLPGYRFHALKGARKGTFAVDASGNYRITFRWDGEDAVEIDLEDYH"
     gene            complement(629..2479)
                     /gene="thiC"
                     /locus_tag="VHN20_16255"
     CDS             complement(629..2479)
                     /gene="thiC"
                     /locus_tag="VHN20_16255"
                     /EC_number="4.1.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009489059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomethylpyrimidine synthase ThiC"
                     /protein_id="HEX2727375.1"
                     /translation="MTVHVDKPKGVPQSVTTGPIAGSRKIYASPQGRPDIRVPLREIA
                     LTDPNEAPVRVYDPSGPYTETDAAVDVNRGLPLVREPWLATRGYAAVEPRAVRPEDNG
                     NISPDKLVPPCPAERAVRKGAPGQRVTQYEFARAGIITEEMIYVAHRENLAREKMLER
                     AEQALADGESFGAAIPPFITAEFVRDEVARGRAIIPANINHPELEPMAIGRNFLVKIN
                     ANIGNSAVVSTAAEEVEKMVWAIRWGADTVMDLSTGRNIHNIRGWILRNAPVPIGTVP
                     IYQALEKVDGDPTKLTWEVFKDTLIEQAEQGVDYFTIHAGVRLPYVPLTARRVTGIVS
                     RGGSIMARWCLAHHKESFLYERFDEICDIMRAYDVSFSLGDGLRPGSIADANDAAQFA
                     ELETLGELTKIAWEKGCQVMIEGPGHVPMHKIKVNMDKQLRECGEAPFYTLGPLTTDI
                     APGYDHITSAIGAAMIGWFGTAMLCYVTPKEHLGLPNRDDVKTGVSTYKIAAHAADLA
                     KGHPAAQLRDDALSRARFDFRWQDQFNLSLDPDTARSFHDETLPKDAHKVAHFCSMCG
                     PKFCSMKITQDLRAEVQAMGDNERAALEGMAKKSEEFLKGGGQLYVDAAE"
     regulatory      complement(2522..2630)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            complement(2785..>3026)
                     /locus_tag="VHN20_16260"
     CDS             complement(2785..>3026)
                     /locus_tag="VHN20_16260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012494229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0010468 - regulation of gene expression
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="AbrB family transcriptional regulator"
                     /protein_id="HEX2727376.1"
                     /translation="AVAAAFAIAVVMLLPVRAADVVMAFSPGAQDTLMLLALALHLDP
                     VFVGAHHLARYMLVSIGIPLAANMIIRRTKQRDQQ"
BASE COUNT          449 a          971 c         1060 g          546 t
ORIGIN      
        1 ccagaactcc gggccgttgc cgaagaactt gcccagccgc agcgccatgg cggccgtcac
       61 cggctgcttc tcgtcgagga tgtcataaag cgtttgccgg gagatgccga gccgtcgcgc
      121 gatttcggtt ttggggagag cgagagcggg gattacgtcc tcgcgcagaa cctcgcccgg
      181 atgcgtaggc gaaagccctt tgagcagcgg gttgccggcc atcaatgata gtcctccaga
      241 tcgatctcga cggcgtcctc gccgtcccat cggaacgtga tccggtaatt gccgctcgcg
      301 tcgaccgcga aggtgccctt gcgggcgcct ttcagcgcgt gaaaacggta gccaggcagg
      361 ttcatgtcgc ctggtgcctt cgccacgttc agctcattca gaatgcgctg aacgcgccgc
      421 gcgttcggca cgctgagctt acgcgcgtcc cctgtctcgg cgaacaggcg caacgtcttg
      481 ctcttgaaag accggatcac tacatgtaag gtatagcctt acacctacgc tgtcaacggc
      541 cttctgtccg ggtcacaact ccgccgacga tgccggcgga ggtgcaagtg gtgggtgaag
      601 ccgagccgaa tgagcgttgg aggtggcgct actccgccgc gtccacatac agctgcccgc
      661 cgcccttcag gaactcctcg ctcttcttgg ccatgccctc gagggcggcg cgttcgttgt
      721 cgcccatcgc ctgcacctcg gcgcgcaggt cctgggtgat cttcatcgag cagaatttcg
      781 ggccgcacat cgagcagaaa tgcgccacct tgtgcgcgtc cttcggcagc gtctcgtcgt
      841 ggaaggagcg cgccgtgtcg gggtcgagcg acaggttgaa ctggtcctgc cagcgaaagt
      901 cgaagcgcgc gcgcgacagc gcgtcgtcgc gcagctgcgc ggccgggtgg cccttggcga
      961 ggtcggccgc gtgcgctgcg attttatacg tgctgacgcc ggtcttgacg tcgtcgcggt
     1021 tgggcaggcc gagatgctcc ttcggcgtca cgtagcagag catggccgtg ccgaaccagc
     1081 cgatcatggc ggcgccgatg gcgctggtga tgtggtcgta gccgggcgcg atgtcggtgg
     1141 tgagcggccc gagcgtgtag aagggcgcct cgccgcattc gcggagctgc ttgtccatgt
     1201 tgaccttgat cttgtgcatc ggcacgtggc cggggccttc gatcatcacc tggcagccct
     1261 tctcccacgc gatcttggtg agctcgccga gcgtctcgag ctcggcgaac tgggccgcgt
     1321 cgttggcgtc ggcgatcgag cccgggcgca ggccgtcgcc gagcgagaac gacacgtcgt
     1381 aggcccgcat gatgtcgcag atctcgtcga agcgctcgta gaggaagctc tccttgtggt
     1441 gcgcgaggca ccagcgcgcc atgatcgagc cgccgcgcga cacgatcccg gtgacgcggc
     1501 gcgccgtcag cggcacgtag ggcaggcgca cgccggcgtg gatcgtgaaa tagtcgacgc
     1561 cctgctcggc ctgctcgatc agcgtgtcct tgaacacctc ccaggtgagt tttgttggat
     1621 cgccgtcgac cttctcgagc gcctggtaga tcggcaccgt gccgatcggc accggcgcgt
     1681 tgcgcaggat ccagccacgg atgttgtgga tgttgcggcc ggtggacagg tccatcaccg
     1741 tgtcggcgcc ccagcggatc gcccacacca tcttctcgac ctcctcggcg gcggtcgaga
     1801 cgaccgccga gttgccgata ttggcgttga tcttgaccag aaaattgcgg ccgatggcca
     1861 tcggctcgag ctcgggatgg ttgatgttgg ctgggatgat ggcgcgcccg cgcgccacct
     1921 cgtcgcgcac gaattccgcc gtgatgaaag gcgggatggc ggccccaaaa ctctcgccgt
     1981 cggcgagcgc ctgctcggcc cgctcgagca ttttttcacg cgcgaggttt tcgcggtgcg
     2041 cgacgtagat catctcctcg gtgatgatgc cggccctggc gaactcgtat tgcgtgacgc
     2101 gctgccccgg cgcgcccttg cgcacggcgc gctcggccgg gcagggcggc acgagcttgt
     2161 cgggcgagat gttgccgttg tcctccggcc gcacggcgcg cggctcgacg gccgcgtagc
     2221 cgcgcgtggc gagccacggc tcgcgcacca gcggcaggcc tctgttcacg tcgacggccg
     2281 cgtcggtctc ggtatacggc cccgacgggt cgtagacgcg caccggggcc tcgttcgggt
     2341 cggtgagcgc gatctcccgc agcggcacgc ggatgtcggg ccggccttgc ggcgacgcat
     2401 agatcttgcg cgagccggcg atcgggccgg tggtgacgct ttgggggacg cccttgggct
     2461 tgtcgacgtg gacggtcatg gtggatctcc tttggttcga ggagacccgg gcaggattcg
     2521 cgggggataa aggttccagt tcctccgccg gaatgacccg gatcaggttc aagggtcacg
     2581 gcgcgtcgag ccgtatctca gccgcttgcg cggcccccct cggaacggcc gcgactgtcg
     2641 gccggggcag cgcgtttgtc aatgcattgt cattccgggg cgcgccgaag gcgcgaaccc
     2701 ggaacccacg accgggtgat cagcgtcgag cttggtcgtg ggttccgggc tcggcgctga
     2761 cgcgccgccc cggaatgaca cgcgttattg ctggtcgcgc tgcttcgtcc gccggatgat
     2821 catgttggcg gcgagcggga tgccgatcga gacgagcatg tagcgggcga ggtggtgcgc
     2881 gccgacgaag accggatcga ggtgcagggc gagcgccagc agcatcagcg tgtcctgggc
     2941 gcccggcgag aaggccatca ccacgtcggc ggcgcgcacc ggcagcagca tgacgaccgc
     3001 gatcgcgaag gccgcggcaa cggccg
//
LOCUS       DATAIQ010000991         5058 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_354055, whole genome shotgun sequence.
ACCESSION   DATAIQ010000991 DATAIQ010000000
VERSION     DATAIQ010000991.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 5058)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5058)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5058
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_354055"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            184..504
                     /locus_tag="VHN20_16265"
     CDS             184..504
                     /locus_tag="VHN20_16265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727377.1"
                     /translation="MADHHERIADLEDEIGKLADAAERCRKVMLATRIGIAFGVLLVI
                     ASAAGMIRLSPTLFVVGIAATVGGIALFGSTRSTREQLLTTLSERESLRAAMIDGLEL
                     RTAS"
     gene            complement(552..1040)
                     /locus_tag="VHN20_16270"
     CDS             complement(552..1040)
                     /locus_tag="VHN20_16270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727378.1"
                     /translation="MCKQDCSAMPSLADVCADEAEMLAVSVSRFIAAAHMTSDAACWD
                     AAYNCVETILGADEGPLFVAGIAGLMRALRFERDAPWHFLPAPCCRLTRDEETLVELL
                     AMARHQQGREVERVAARLAGSGTAPRLVAAAHRGAIAIDRAARCLGAPHDRFAPATAA
                     LH"
     gene            1441..1746
                     /locus_tag="VHN20_16275"
     CDS             1441..1746
                     /locus_tag="VHN20_16275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727379.1"
                     /translation="MTMDVPHEPDWRAKARAISDYADLFWRSSRDNLDYLKGLDLSAA
                     SPRLTWVEKHWPPRNTFEQSVFLSIAAMLARGAFTMPIPSPRRMNDSRSFCTSTSMR"
     gene            2010..3146
                     /locus_tag="VHN20_16280"
     CDS             2010..3146
                     /locus_tag="VHN20_16280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019965886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030554 - adenyl nucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-containing alcohol dehydrogenase"
                     /protein_id="HEX2727380.1"
                     /translation="MVLINYVTSVQFGFGAVAMLQDECRRVGIGRPLIVTDPGVRAAG
                     LLDRVVAQLEGISFAVFDATPSNPTEQAVRAGVETYRASGCDGVIAVGGGSPIDLAKG
                     VALAATHAGPLQSYAAVAGGVARITLGVAPVIAVPTTAGTGSEVGRGAILIMDDGRKL
                     GVLSPHLVPKSAICDPELTLGLPPLLTAATGMDALSHCIETFLAPAFNPPADGIALDG
                     LERGWAHIERATRDGGDRDARLNMMSASMQGAMAFQKGLGCVHSLSHALGGLDPRLHH
                     GTLNALLLPAVLDFNAGAPSVVAERRMERLARAMHLDSAKAVAPAIRDLNRRLGLPAG
                     LRALGVSEALFPQIIDGALKDHTHKTNPREATADDSAAMLTASM"
     gene            3212..3856
                     /gene="nthA"
                     /locus_tag="VHN20_16285"
     CDS             3212..3856
                     /gene="nthA"
                     /locus_tag="VHN20_16285"
                     /EC_number="4.2.1.84"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007591118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018822 - nitrile hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0050898 - nitrile metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrile hydratase subunit alpha"
                     /protein_id="HEX2727381.1"
                     /translation="MSTHHHDHGHHGHDHQHGSELSEMELRVRDLETILVEKGYVETA
                     ALDGIVEAYETKIGPHIGARIVAKAWSDPAFKQALLAHASKAIAAADPQARVRDHLVA
                     VENTPQLHNIVVCTLCSCYPWDMLGLPPVWYKSAPYRSRTVKEPRAVLVDFGVTLPDA
                     TEIRVWDSTAETRYLVVPMRPAGTEGWSEERLAALVTRDSMIGAGLPKKPREVA"
     gene            3856..4515
                     /gene="nthB"
                     /locus_tag="VHN20_16290"
     CDS             3856..4515
                     /gene="nthB"
                     /locus_tag="VHN20_16290"
                     /EC_number="4.2.1.84"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007610314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018822 - nitrile hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0050898 - nitrile metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrile hydratase subunit beta"
                     /protein_id="HEX2727382.1"
                     /translation="MDGVHDMGGMDGFGKVAPEANEPVFHAAWEGRVMAMSRALGASG
                     TWTIDHSRYGIERLPPHVYLTSSYYKRWFLRTQMLLVEHGLVGEDEIAAGHALRPGSA
                     LPRGTFTAADIGRVMNRGSYGRPAPGPARFKIGDGVRARNIHPRSHTRLPRYVRGRVG
                     RVEIVHGVHVFPDARVAGLGDDPQWLYAVRFEAKELWGDDADPTVKVSVDAFEPYLEP
                     A"
     gene            4517..4906
                     /locus_tag="VHN20_16295"
     CDS             4517..4906
                     /locus_tag="VHN20_16295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011926750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0050898 - nitrile metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrile hydratase accessory protein"
                     /protein_id="HEX2727383.1"
                     /translation="MAAAGAEAARRATEAVASVPRDAHGPVFCEPWEAHAFAMAVALH
                     DAGLFTWSEWATILGDEIKRAQAAGDPDKGDTYYRHWLAALERVVTEKGVTTAEALAR
                     CHDAWDRAADRTPHGTPIMLAPEDFRG"
BASE COUNT          825 a         1673 c         1772 g          788 t
ORIGIN      
        1 ctaccactcg aagcgttgtc cgacccggac acatgggtga cggatcgttg ctgaaacata
       61 ggtgacaatc cggccccgag gggggaccga agcattgcag gaccgagtgc tgcatgtatt
      121 gacgcggtcg gcgaattcca cccatctctt gggtcactca agaggtgagc gccaaggcac
      181 ccgatggctg atcaccacga gcggatcgcc gatctcgaag atgagatcgg caagctggcc
      241 gatgccgcgg agcggtgccg gaaggtgatg ctcgcgacca gaatcgggat cgcctttgga
      301 gtgctgctcg tcatcgccag cgccgccggg atgatccggc tcagtccgac gctcttcgtc
      361 gtcggcatcg cggcgactgt aggaggcatt gcgttgttcg gatcgacccg aagcacgcgc
      421 gagcagctcc tcacgacgct cagcgagcgc gaaagcctgc gtgcggcgat gatcgacgga
      481 ttggagctcc ggaccgcctc gtaatgctcg ccagctctcg cgcggtgagc tgcgcgcgct
      541 tcgccgtgcc atcagtgcag cgccgcggtg gccggcgcaa accggtcgtg aggcgcgccg
      601 agacaacggg cggcccggtc gatggcgatc gcgccacggt gcgccgccgc gaccaggcgc
      661 ggcgcggtgc cggagccggc aagccgtgcg gcgacgcgct cgacctcgcg gccctgttga
      721 tgccgcgcca tggcgagcaa ctcgacgagg gtctcttcgt ccctggtcag gcggcaacac
      781 ggcgccggca ggaaatgcca tggcgcgtcg cgctcgaatc tcagcgcgcg catgaggccc
      841 gcgatgccgg caacgaacag cgggccctcg tcggcgccga ggatcgtctc gacgcaattg
      901 taggccgcgt cccagcaggc ggcgtcgctc gtcatgtggg ccgctgcgat gaaacgggac
      961 acggatacgg cgagcatctc ggcttcatcg gcgcagacgt ccgccaagct cggcatggcc
     1021 gagcagtctt gcttgcacat gggtttgctc tcgggctcag tctcggagtg agggcgtgcg
     1081 gaaccgtggc gcgccgcggc gcgccgtgcc atgcgtttgc gcatggctca gccgtggaaa
     1141 ctggatcgga agcccgcgtc tggtggagac tgagcagaat gaggtgaacg aaacggaacg
     1201 ggtccaacga gccggtgacg acgagaccgc attgtgtcct ccaaccgacg ggttcaaggc
     1261 ccgtgctcag agcgatgcaa cgcagcgaag acaaacgatc ggttcctgcg tgtcaagcga
     1321 aaagcgcaac gagagcaaca cgttagaagg catctaaagt gcgggcgcaa tctcctgcag
     1381 cgacgcggtg ccgtcgctcc cgtcgaccgc cgcgatcgtt gcggccgtga gaggttcacg
     1441 atgaccatgg acgtcccgca tgaaccggat tggcgagcca aggctcgcgc catctcggat
     1501 tatgcggacc tgttctggcg ttccagccgc gacaatctcg actacctgaa ggggctcgat
     1561 ctgtccgccg cgagccccag gttgacgtgg gtggagaagc actggccgcc gcgcaacacg
     1621 ttcgagcagt cggtcttcct gtcgattgcc gccatgctgg caaggggggc gttcacgatg
     1681 ccgatcccgt cgccgaggcg gatgaacgat tcccgctcgt tctgcacgtc cacctcaatg
     1741 cgatgaacaa cgtcgatctg cgcgactggt gcgccgagga cgcgtagcgg ctgatggcgg
     1801 tcgccggttg cgccgaccgc gacgggctcc agcgcgaatt catcgcatgg tgcgagggaa
     1861 tgcttgcgga gatgctggac catgtcacgg ccgggtaggg caggggcttg tcacggcgga
     1921 gggtgggcca gcacaatgga ctgatggcgc cggcgtcttc ggcgcacgtg ccggatccaa
     1981 cccttggcgc acgagaggag cctgacctcg tggtactcat caattacgtg acgagcgtgc
     2041 agttcgggtt tggcgccgtc gcgatgttgc aggacgaatg ccggcgcgtc ggcatcggcc
     2101 ggccgctcat cgtgaccgac ccgggcgttc gggcggcggg gctgctcgat cgcgtcgtcg
     2161 cgcaactcga aggaatttcc ttcgcggtgt tcgacgcgac gccgtcaaat ccgaccgagc
     2221 aggcggtgcg cgcgggcgtc gagacctatc gcgcgtccgg atgcgacggg gtgatcgccg
     2281 tcggtggcgg ctcgcccatc gaccttgcca agggggtcgc gctcgccgcc acccatgccg
     2341 ggccgttgca aagttacgca gccgtcgcgg gcggcgtcgc gcgcattacg ttgggcgtcg
     2401 cgccggtgat cgccgtcccg accaccgccg gaaccggcag cgaggtcggg cgcggcgcca
     2461 ttctgatcat ggacgacggc cgcaagctcg gcgtcctgtc gccgcatctg gttccgaaat
     2521 ctgcgatctg cgatccggag ctgacgctgg gcctgccgcc actgctcacc gccgcgaccg
     2581 gcatggacgc gctgtcgcat tgcatcgaga ccttcctggc cccggccttc aatccgccgg
     2641 ccgacggcat cgcgctcgac ggcctcgaac gcggctgggc gcatatcgag cgggcgacgc
     2701 gggatggagg cgaccgtgac gcgcgcctca acatgatgag cgcgtccatg cagggcgcga
     2761 tggcctttca gaaagggctt ggctgcgtgc acagcctgag ccacgccttg ggagggctcg
     2821 atccgcggct gcatcacggc acgctcaacg cgctgctgct gccggccgtg ctcgacttca
     2881 acgcgggtgc gccatcggtc gtcgccgaac ggcgcatgga gcggctcgcg cgggcgatgc
     2941 atctcgactc ggcgaaggcc gtcgcgccgg cgatccgcga cctgaacagg cggctcggcc
     3001 tgccggcggg attgcgcgcg ctcggcgtgt ccgaagcgct tttcccgcag atcatcgacg
     3061 gcgccctgaa ggaccatacc cacaagacca acccgcgcga agccaccgcc gacgactccg
     3121 ccgcgatgct gaccgcctcg atgtagcggg cgcgggacaa tccaccgtgc ttcgcatagg
     3181 caaccccgtc ccgatcggct aggctgcccc catgtcaaca catcaccacg accacggcca
     3241 tcacggccac gaccaccagc acggctccga gctctcggag atggagctgc gcgtccgcga
     3301 cctcgagacg atcctggtcg agaagggcta tgtcgagacg gcggcgctcg acggcatcgt
     3361 cgaggcctat gagacgaaga tcgggccaca tattggcgcg cgcatcgtcg ccaaggcatg
     3421 gagcgacccg gccttcaagc aggcgctgct cgcccacgcc tccaaggcga tcgccgcggc
     3481 cgatccgcag gcgcgcgttc gcgatcactt ggtcgcggtc gagaatacgc cgcagctgca
     3541 caacatcgtc gtgtgcacgc tgtgctcctg ctatccgtgg gacatgctcg gcctgccgcc
     3601 ggtttggtac aaatcggccc cgtaccgctc gcgcacggtc aaggagccgc gcgccgtgct
     3661 tgtcgatttc ggcgtgacgc tgccggacgc gaccgagatc cgggtgtggg attcgaccgc
     3721 ggagacgcgc tatctcgtgg tgccgatgcg cccggccgga accgaaggct ggagcgagga
     3781 gcggctcgcc gccctggtca cgcgcgacag catgatcggc gccgggctgc cgaaaaagcc
     3841 gcgcgaggtg gcgtgatgga cggcgtgcac gacatgggcg gcatggacgg cttcggcaag
     3901 gtcgcgccgg aggcgaacga gccggtgttc cacgccgcgt gggaagggcg cgtcatggcg
     3961 atgagccgcg cgctcggcgc atccgggacg tggacgatcg atcactcgcg ctacggcatc
     4021 gagcggctgc cgccgcacgt ctacctgacg agctcgtatt acaagaggtg gttcctgcgc
     4081 acgcagatgc tgctcgtcga gcacgggctc gtcggcgagg acgagatcgc cgccggccat
     4141 gcgcttcgcc ccggcagtgc gttgccgcgc ggcacgttca cggccgcgga tatcgggcgc
     4201 gtgatgaacc gcggctcgta tggacggcct gcgccgggtc ccgcgcgctt caagatcggc
     4261 gacggcgtgc gcgccaggaa catccatccc aggtcgcata cgcgtctgcc gcgctacgtg
     4321 cgcggtcgtg tgggcagggt cgagatcgtg catggcgtgc acgtgtttcc ggatgcgcgc
     4381 gtcgcgggcc tcggcgacga cccgcaatgg ctctacgccg tgcgcttcga ggccaaagaa
     4441 ttgtgggggg acgacgccga ccccaccgtc aaagtgtcgg tcgacgcgtt cgagccgtat
     4501 ctggagcccg cctgacatgg cggcggccgg ggccgaggcg gcgcgccgcg cgaccgaggc
     4561 cgtcgccagc gttccgcgtg acgcgcacgg ccccgtgttc tgcgagccgt gggaggcgca
     4621 cgccttcgcg atggcggttg cgctgcacga tgccggcctg ttcacgtgga gcgaatgggc
     4681 cacgatcctc ggagacgaga tcaagcgcgc gcaggccgcc ggcgatcccg acaaaggcga
     4741 cacctattat cgccactggc tcgcggccct cgagcgcgtc gtcaccgaga agggcgtcac
     4801 cacggccgag gcgctggcac gctgccacga tgcctgggac cgggctgccg atcgcacgcc
     4861 gcacggcacg ccgatcatgc tcgcgccgga ggattttcgc ggctgatcct gccgtcggag
     4921 ctgtccagca gcgggatggc cctccacagt ctctgcacag ctttgccaca ggcgtagcac
     4981 agcctttggc ccaagcttca tacagcctgg acgagcccgg aactgggggt ggcggttcgc
     5041 ggtcctcgag agggggac
//
LOCUS       DATAIQ010000992         2144 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_354131, whole genome shotgun sequence.
ACCESSION   DATAIQ010000992 DATAIQ010000000
VERSION     DATAIQ010000992.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2144)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2144)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2144
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_354131"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1512)
                     /locus_tag="VHN20_16300"
     CDS             complement(<1..1512)
                     /locus_tag="VHN20_16300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018427014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I secretion system permease/ATPase"
                     /protein_id="HEX2727384.1"
                     /translation="MRAPSKKSELVEALASCRGAFLTIGLFSGVINILMLTGSIYMLQ
                     VYDRVLPSRSVPTLIGLTVLIIFLFSLQGVLDWLRQRLLTRIGLTLDAELSKRIFNII
                     VSLPLKTRGLADGLQPLRDFDAVRSFLSGLGPTALFDLPWLPLYLGLCFLLHPWLGLT
                     ALVGAIILAGLAMLTEVLSRQPLQQASAHAAIRHDQAEASRRNAEAIRAMGMGQALAR
                     RWADVNDKYLLVQERATDVGSGLGSVSKVLRFLLQSIVLGVGAWLAILDKASPGVIIA
                     SSILTSRALAPIEIAIAHWKAFLSARQSWKRLGELLAALPPESDPMPLPAPKKALAVE
                     GVVVGSPGSREPIVSNVSFALSAGDGLGVIGPSASGKSSLVRALVGVWPLMRGAIRLD
                     GATLDHWSPTSLGPSIGYMPQGIELFDGTVAENISRFAEEPDPARVVAAAQAAGAHDM
                     ILRLPQGYDTRTGEGAGSLSAGQRQRIALARALYGDPFLVVLDEPNSNLDSEGE"
     gene            complement(1721..>2144)
                     /locus_tag="VHN20_16305"
     CDS             complement(1721..>2144)
                     /locus_tag="VHN20_16305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727385.1"
                     /translation="MRLALRHRPGLARSGPGRESRLRRSLVWGGRHSLLIYLVHQPIL
                     LAVLFGVARVIGPNAAAEEASFLRNCVASCAAQGGAAALCDAGCGCTATKLKAEGLWQ
                     ATTRDAAEPALRERAARLAGQCFDEKRQNPGDPGAAPR"
BASE COUNT          377 a          705 c          763 g          299 t
ORIGIN      
        1 ctccccctcg ctgtccaaat tcgagtttgg ctcgtcaagc acgaccagga agggatcgcc
       61 atacaacgcc ctggccaagg cgatccgctg acgctgaccg gcggacaggg agccggcccc
      121 ttcgccggtg cgggtgtcgt agccttgcgg cagccgcagg atcatgtcgt gcgccccggc
      181 agcctgcgcg gccgcgacca cgcgcgccgg atcgggctcc tcggcaaagc gcgagatgtt
      241 ctcggcgacg gtgccgtcga acagctcgat gccctgcggc atgtagccga tcgaggggcc
      301 gagcgaggtc gggctccaat gatccagggt ggcgccgtcg aggcggatgg cgccgcgcat
      361 cagcggccac acaccgacga gcgcgcgcac gaggctcgac ttgcccgacg cgctcgggcc
      421 gatgacgccg aggccgtcgc cggcggacag cgcgaagctg acgttgctga cgatcggctc
      481 gcgcgagccg ggggacccga cgaccacgcc ctcgaccgca agggccttct tgggggcggg
      541 gaggggcatc ggatcactct cgggcggcag ggccgccagg agctcgccga ggcgcttcca
      601 gctttgccgc gccgacagga acgccttcca atgggcgatg gcgatctcga tcggggcgag
      661 cgcgcggctc gtcaggatcg acgaggcgat gatcacgccg ggcgacgcct tgtccaagat
      721 cgccagccag gcgccgacgc cgagcacgat cgactgcaac aggaagcgca acaccttgga
      781 cacggagccg aggccgctgc cgacatcggt cgcgcgctcc tgcacgagaa gatacttgtc
      841 gttcacgtca gcccagcggc gcgccagcgc ctggcccatg cccatggcgc ggatcgcctc
      901 ggcgttgcgg cgcgaggctt ccgcctggtc gtgacggatg gcggcatgcg ccgaggcctg
      961 ctgcagcggc tgccgcgaca ggacctcggt aagcatggcg aggccggcca ggatgatcgc
     1021 gccgacgagt gccgtgagcc ccagccaggg atgcagcagg aagcaaaggc cgagataaag
     1081 cggcagccac ggcagatcga acaaggcggt gggcccgagg ccggacagga acgagcgcac
     1141 cgcatcgaag tcgcgcaagg gctgcaggcc gtcggcgagg ccgcgcgtct tgaggggcag
     1201 gctgacgatg atgttgaaga tgcgcttcga cagctcggca tcgagcgtca ggccgatgcg
     1261 cgtcagaagg cgctgccgca gccagtcgag gacgccctgg aggctgaaca ggaagatgat
     1321 caggaccgtg aggccgatca gggtaggaac gcttcggctc ggcaggaccc ggtcatagac
     1381 ctgcagcatg taaatcgagc cggtcagcat caggatgttg atgacgccgg agaagaggcc
     1441 gatggtcaga aacgctccgc ggcaggaagc aagcgcctcg acaagttcgg atttcttcga
     1501 cggcgctctc atgtacacac ccgcaggttc gagcttcgat tctcgcggac cgcaaaacga
     1561 aggtcaggtg ggccggcggc cgcgctcgcg agccgtcagc catgcccccc ggcgagatcg
     1621 ctgaatacta taacgaaagc cggggtttta tggcactatt ttgtcgttga gatggctata
     1681 tagctgcgca tccttaatct gtatgtgctc cgtcgcacac tcagcgaggg gccgcccccg
     1741 ggtcgccggg attctgcctt ttctcgtcga agcactggcc cgccaggcgg gccgctcgct
     1801 cccggagagc cggttcggcc gcgtcacgcg tcgtggcctg ccataggcct tcggccttga
     1861 gctttgtggc cgtgcagccg cagccggcat cgcacagggc cgccgcgccc ccctgtgcag
     1921 cgcagcttgc gacgcagttc ctgaggaacg acgcctcctc ggcagcggca ttggggccga
     1981 tgacccgggc caccccgaac aggaccgcca gcaggatcgg ctggtggacg aggtagatga
     2041 ggaggctgtg gcggccgccc cagacgaggc tccggcgaag ccggctctcc cggccagggc
     2101 ccgaccgggc aaggccgggc cgatgccgca gggccaggcg catg
//
LOCUS       DATAIQ010000993         2215 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_216434, whole genome shotgun sequence.
ACCESSION   DATAIQ010000993 DATAIQ010000000
VERSION     DATAIQ010000993.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2215)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2215)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2215
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_216434"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1207
                     /locus_tag="VHN20_16310"
     CDS             <1..1207
                     /locus_tag="VHN20_16310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010685378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="guanylate cyclase"
                     /protein_id="HEX2727386.1"
                     /translation="PRLSFVVLPFANLTNDADQEHVADGVTADVTAELSHLADSFVIA
                     RDTASTYKGTATDAKQLGRDLGVRYVLEGSVARRGNQVRVSAQLVSAETGAPVWADRV
                     EGEMGRLGELQLEIVARLARSLGAQIPDADMLRALRDRASDPDAVDLALRGWAALDRP
                     PSEDNAVEALGQFEKALQLDPQLPQGLVGMARALLVMVANGWSANPAQDTARADELVT
                     RVLTIEPGHASARLVKADVLKTRRQFDQAISELKVAIGHDRNLAAGHASAGATSIFAG
                     RSADAVPLLETAIRLSPRDPLLNVWQFQICHAHAHLAQWDQAITWCGKSTATNPDYWL
                     PYADLAAAYAWSGRDAEARAAVAELLKLMPGYTVRKWLDAGVSDNATFRSEYQRIVDG
                     LRKAGLPEG"
     gene            complement(1246..2172)
                     /locus_tag="VHN20_16315"
     CDS             complement(1246..2172)
                     /locus_tag="VHN20_16315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727387.1"
                     /translation="MAAMIERDVAIVVCSRGREAVLTRLLDDLERAFVPALAAGGLSH
                     CIWVYAQGYAPEFLAGLERRFGAAVAAETLVVSAATRPHARIGDVVDTAIRTVHDGGR
                     YKLAMLMDDDSVYAPHPAVDANIARAARTFIAHGHRAYSIKLGASCALEYQPFVDLAG
                     PIMPFKEKMLWVSRAVLDEVLLTPRFREISIGEDAVIAAVAWLGDPGTCFGVYGMGTF
                     LHLGYEAAPEFGEGDIAGGYAELMNYDGPRPEAVHGKYDEALRTGVTPYHVMPDVFVA
                     EDHPHYIYNGIRAEVIARLRAAGRLEKPSGSI"
BASE COUNT          365 a          781 c          761 g          308 t
ORIGIN      
        1 gccgcgcctc tccttcgtgg tcctcccgtt cgcgaacctc acgaacgatg ccgaccagga
       61 gcacgtggca gacggcgtca ccgccgacgt gacggcggag ctctcgcacc tcgcggacag
      121 cttcgtgatc gcgcgcgaca cggcctccac ctacaagggc accgcgaccg acgcgaagca
      181 gctcgggcgc gatctcgggg tgcgctacgt gctggaggga agcgtcgcgc gccgcggcaa
      241 ccaggtgcgc gtgagcgcgc agctggtctc ggcggaaacc ggcgcgccag tctgggccga
      301 ccgcgtcgaa ggcgagatgg gccggctcgg agagttgcag ctcgagatcg tggcgcggtt
      361 ggcgagatcg ctcggggcgc agatcccaga cgcggacatg ctgcgcgcgc tgcgcgaccg
      421 cgccagcgat ccggacgcag tcgacctcgc cttgcggggc tgggccgccc tcgacaggcc
      481 gccgagcgag gacaacgctg tcgaggccct cggccagttc gaaaaggcgc tgcagctcga
      541 cccgcagctt ccgcagggtc tcgtcggcat ggcgcgggcg cttctcgtca tggtggccaa
      601 cggctggagc gccaaccccg cgcaggacac ggcgcgggcc gacgagctgg tcacgcgcgt
      661 gctcaccatc gagccgggcc acgcctcggc gcggctggtc aaggccgacg tgctgaagac
      721 gcggcggcaa ttcgaccagg ccatcagcga gctcaaggtg gcgatcggcc acgaccgcaa
      781 tctcgccgcc ggccacgcca gcgcgggcgc gacgagcatc ttcgccggac gctcggcgga
      841 cgccgtgccg cttctcgaga cggcgatccg cctcagcccg cgcgatccgc tcctgaacgt
      901 gtggcagttc cagatctgcc acgcgcatgc gcatctggcg caatgggacc aggcgatcac
      961 atggtgcggc aagtcgaccg cgaccaaccc cgattattgg ctgccctacg ccgacctagc
     1021 cgcggcgtat gcgtggagcg ggcgcgacgc cgaggcgcgc gcggccgtcg ccgagctgct
     1081 caagctgatg ccgggctaca cggtgcgcaa atggctggat gcaggcgtgt ccgacaacgc
     1141 gacctttcgc agcgaatacc agcgcatcgt cgacggcctg cgcaaagccg gcctgccgga
     1201 gggctgagcc ctcatccgcg acccggcgac cagagcgcga tcaactcaga tcgatccgct
     1261 cggtttctcg agcctgcccg cggcgcgcag gcgcgcgatc acctcggcgc ggatgccgtt
     1321 gtagatgtag tgcggatggt cttcggcgac gaacacgtcg ggcatgacgt gatacggggt
     1381 gacgcccgtg cgcagggcct cgtcgtattt gccgtgcacc gcctccgggc gcgggccgtc
     1441 ataattcatc agctcggcat agccgccagc gatgtcccct tcgccgaact ccggcgccgc
     1501 ttcatagccg agatgcagga acgtccccat gccgtagacg ccgaagcagg taccgggatc
     1561 gccgagccac gccaccgcgg cgatcaccgc gtcctccccg atgctgatct cgcggaagcg
     1621 aggcgtcagg agaacctcgt cgaggaccgc acggctcacc cacagcatct tctccttgaa
     1681 cggcatgatc gggccggcga ggtcgacgaa gggctgatac tcgagggcgc agctcgcccc
     1741 gagcttgatc gaataggcgc ggtgcccgtg agcgatgaag gtacgggcgg cacgcgcaat
     1801 gttcgcgtcg acggccggat gcggcgcgta gacgctgtca tcgtccatca gcatggcgag
     1861 cttgtagcgg ccgccgtcat ggaccgtgcg gatggcggta tcaacgacgt cgccgatgcg
     1921 ggcgtgcggc cgggtcgcgg cgctgacaac cagcgtctcc gccgcgaccg cggcaccgaa
     1981 cctgcgctcg agaccggcca ggaattccgg ggcataacct tgtgcgtaga cccagatgca
     2041 atggctcagg ccgccggccg cgagcgcagg cacgaaggcc cgctcgagat cgtccaacag
     2101 gcgcgtgagc accgcctccc ggccgcggct gcaaacgacg atggcgacgt cacgctcgat
     2161 catcgctgcc acgcgcccga tccgccatca tggatattcc ccccgcccgc ccgtg
//
LOCUS       DATAIQ010000994         1507 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_354360, whole genome shotgun sequence.
ACCESSION   DATAIQ010000994 DATAIQ010000000
VERSION     DATAIQ010000994.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1507)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1507)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1507
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_354360"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..159
                     /locus_tag="VHN20_16320"
     CDS             <1..159
                     /locus_tag="VHN20_16320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011982338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter permease subunit"
                     /protein_id="HEX2727388.1"
                     /translation="VSEILPLLIVIKLEQFDYAGATAIATMMLIASFALLLTINLLQA
                     WTRRRHGG"
     gene            212..1051
                     /gene="cysW"
                     /locus_tag="VHN20_16325"
     CDS             212..1051
                     /gene="cysW"
                     /locus_tag="VHN20_16325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008876753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015419 - ABC-type sulfate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008272 - sulfate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter permease subunit CysW"
                     /protein_id="HEX2727389.1"
                     /translation="MRLPLTEPFAARVALIAIALLFLGMCLVLPLVIVFVEALRAGLN
                     AYWAAISEPYAISAIKLTLLTAAIAVPLNLVFGVAAAWAITKFRFPGKSFLVTLIDLP
                     FSVSPVIAGMVYVLLFGLQGLFGGWLAAHDVKIIFAVPGIVLATLFVTLPFVARELIP
                     VMEQQGTQQEEAALILGANGWQTFWRGTLPNIKWGLLYGVLLCNGRAIGEFGAVSVVS
                     GHIIGLTNTMPLHVEVLYNDYDFVASFAVASLLTLMALVTLAIKAVLEWRSGADTSQT
                     RVH"
     gene            1061..>1507
                     /locus_tag="VHN20_16330"
     CDS             1061..>1507
                     /locus_tag="VHN20_16330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018237911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX2727390.1"
                     /translation="MRIQIENLTKRFQDTLVLDHVNLDIRQREFLGLLGPSGSGKTTL
                     LRIIAGLDFAGEGVVKFDGEDIGTLPLQQRQVGFVFQQYALFAHMRVVDNVAFGLKVR
                     PRRRRPARAEIGRRVNELLDLVQLSGFGDRFPAQLSGGQRQRVALAR"
BASE COUNT          207 a          536 c          493 g          271 t
ORIGIN      
        1 gtgtccgaga tcctgcctct cctgatcgtg atcaagctcg agcagttcga ctatgccggc
       61 gccacggcca tcgccacgat gatgctgatc gcctcgttcg cgctgctgct cacgatcaac
      121 ctgctgcagg cctggacgag gaggcgccac ggtgggtgac ctggtcggga ccgcggtcgc
      181 gttcggcgcg ccggaaaccg ccaggccgca agtgcggctg ccgctgaccg agccgttcgc
      241 ggcgcgcgtc gcgctgatcg cgatcgcgct cctgttcctc ggcatgtgcc tcgtgctgcc
      301 gctggtcatc gtgttcgtgg aggcgctgcg ggccggcctc aacgcctact gggcggcgat
      361 cagcgagcct tatgcgatct ccgccatcaa gctgacgctg ctgacggccg ccatcgcggt
      421 gccgctgaac ctcgtgttcg gcgtcgccgc cgcctgggcc atcaccaagt tcagattccc
      481 gggcaagagt tttctcgtca cgctgatcga cctgccgttc tcggtctcgc cggtgatcgc
      541 cggcatggtc tacgtgctgc tgttcgggct gcagggcctg ttcggcgggt ggctcgccgc
      601 gcacgacgtc aagatcatct tcgccgtgcc cggcatcgtg ctcgccacgc tgttcgtcac
      661 gctgccgttc gtggcgcgcg agctcattcc cgtgatggag cagcagggca cgcagcagga
      721 ggaggcggcg ctgatcctcg gcgccaacgg ctggcagacc ttctggcgcg gcacgctgcc
      781 caacatcaaa tgggggctgc tctacggcgt gctgctctgc aacggccgcg ccatcggcga
      841 gttcggcgcc gtgtcggtgg tgtcggggca catcatcggc ctgaccaaca ccatgccgct
      901 gcacgtcgag gtgctctaca acgactacga cttcgttgcc tcgttcgcgg tcgcctcgct
      961 cctgacgctg atggcgctcg tcacgctcgc catcaaggcc gtcctcgaat ggcgctccgg
     1021 cgccgacacc tcgcagacgc gcgtgcactg aggagctgcg atgcgcatcc agatcgagaa
     1081 cctcaccaag cgcttccagg acacgctggt gctcgaccac gtcaacctcg acatccgcca
     1141 acgcgagttc ctcgggctgc tcggcccgtc cgggtcgggc aagacgacgc tcctgcgcat
     1201 catcgccggc ctcgacttcg ccggcgaggg cgtcgtcaag ttcgacggcg aggacatcgg
     1261 cacgctgcca ctgcagcagc gccaggtcgg cttcgtgttc cagcaatacg cgctgttcgc
     1321 gcatatgcgc gtggtcgaca acgtcgcctt cggcctgaag gtgcggccac gccgccgccg
     1381 cccggcgcgc gccgagatcg gccggcgcgt caacgagctg ctcgacctcg tacagctgag
     1441 cgggttcggc gaccgcttcc cggcgcaatt gtcgggcggg cagcgccagc gcgtcgcgct
     1501 cgcccgc
//
LOCUS       DATAIQ010000995         1822 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_354365, whole genome shotgun sequence.
ACCESSION   DATAIQ010000995 DATAIQ010000000
VERSION     DATAIQ010000995.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1822)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1822)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1822
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_354365"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(138..1229)
                     /locus_tag="VHN20_16335"
     CDS             complement(138..1229)
                     /locus_tag="VHN20_16335"
                     /EC_number="5.1.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF008277.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016857 - racemase and epimerase activity,
                     acting on carbohydrates and derivatives [Evidence IEA];
                     GO_function: GO:0030246 - carbohydrate binding [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldose epimerase family protein"
                     /protein_id="HEX2727391.1"
                     /translation="MKRIALIAAALPAAASAQVAHDEAVVLRNRSGMEVHILPFGATV
                     TRVIVPDRQGRRANVVLGYASAAEYRAKNRKNMFGATIGRYAGRIAGAGFTLDGKPVR
                     LVPNDGSNALHGGGKVGFDNVEWRVSRAKPTRADEVTFSLTSPDGFQGFPGQVAVSVT
                     YRLTADNALRIDYRARTTATTVLNLTNHSYFNLAGEGSGSVDKQWLQIAARRYVATDP
                     TGVPTGASPAVDDTPLDFRSPHRIGERINSSQPPMTGRGYNHAWLLDKGAGRLAVAAR
                     LADPGSGRTLTILTTEPSVQVYTGGYIDGKDAGPSGRTIHPGDGVAIETQHLSDSPNR
                     PAFPTTLLRPGQIYHSTTIWQFGTSASAR"
     gene            complement(1226..>1822)
                     /locus_tag="VHN20_16340"
     CDS             complement(1226..>1822)
                     /locus_tag="VHN20_16340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727392.1"
                     /translation="TRDKTLVAKLLTLEPEIIGNIEKNGWALAGILPQLPFDFRDRVT
                     KAVASYQAKVQADARTDSPYGVPYKPEIWGAGWTIQERGVRQYFFHKGWPDLTSTDSY
                     VNALNFVLGAHPGENTASFVSGVGARSATTAYGTNRADWSYIPGGVISGTNLVRPDLP
                     ELKVWPFFWQQGEYVLGGGATNYMFLALAADKLYGAKK"
BASE COUNT          307 a          583 c          605 g          327 t
ORIGIN      
        1 gggaatgcct ccgcggaggc ccgagcgatg ctccagcctg cggtgccgat gaaaacaggg
       61 gagggccgat ccatctcaag caaacgtgca aggcctcgaa tgtctgccgc taatgcgagc
      121 gccgccaatc gagccggcta acgagcgctt gcgctggtcc cgaactgcca gatcgtggtg
      181 gaatggtaga tctgccccgg ccgcaacagg gtagtaggaa aggctgggcg gttgggactg
      241 tcggagagat gctgcgtctc tatggcgacg ccatcgcccg gatgaatggt ccgtccgctc
      301 ggaccggcgt ccttcccgtc gatgtagcca ccggtataca cctgcacgct cggctccgtc
      361 gtcaggatcg tcagcgtgcg ccccgagcca ggatccgcga gcctggccgc cactgccagc
      421 cgccccgcac ctttatctag caaccacgca tggttgtagc cgcgtccggt catcggcggc
      481 tggctgctgt tgatccgctc gccaatgcga tgcggagagc ggaagtcgag cggcgtgtcg
      541 tcgactgcgg gagaagcacc ggtcggaacg cccgtgggat cggtcgcgac atagcggcgg
      601 gccgcaatct gcagccactg tttatcgacg gagccgctgc cctcaccggc aaggttgaaa
      661 tagctgtggt tggtgaggtt cagcaccgtt gtggccgttg tccgcgcgcg atagtcgatc
      721 ctcagcgcgt tgtcggccgt aaggcggtag gtcacgctga ctgcgacctg cccgggaaag
      781 ccttggaacc cgtcggggct ggtgagcgaa aaggtgactt cgtccgctct agtcggcttt
      841 gctcgcgaga cgcgccactc gacattgtcg aagccgacct taccgccgcc gtgcagcgcg
      901 ttgctgccgt cgttcggcac gaggcgcact ggcttcccgt caagggtgaa gccggcgccc
      961 gcgatccgtc ctgcatagcg cccgatggtc gcgccgaaca tgttcttgcg gttcttcgcg
     1021 cgatactccg ccgcacttgc atagccgagc accacattgg cgcggcgtcc ttggcgatcg
     1081 ggcacgatga cccgtgtgac cgtcgcgccg aaggggagaa tgtgcacctc cattcccgac
     1141 cgattgcgca gcacgacagc ctcgtcatgc gccacctggg ctgaggcagc agccggcagc
     1201 gcagcggcga tcagggcgat ccgcttcact tcttggcgcc gtagagcttg tctgccgcca
     1261 gcgcgaggaa catgtagttg gtcgcgccgc cgccgagcac atattcgccc tgctgccaga
     1321 agaagggcca aaccttgagc tcgggcaggt ccgggcgcac gaggttcgtg ccggagatca
     1381 cgccgcccgg gatgtaggac cagtcggctc ggttggtgcc gtaagcggtg gttgcggagc
     1441 gggcgcccac ccccgacacg aagctcgcgg tattctcccc gggatgcgcg ccaagcacga
     1501 agttgagcgc attgacgtag ctgtcagtgg aggtgagatc aggccagccc ttgtggaaga
     1561 aatattggcg cacgccgcgc tcctggatgg tccagcccgc gccccagatt tccggcttgt
     1621 agggcacacc gtagggagag tccgtacgtg cgtccgcctg aaccttcgcc tggtaactgg
     1681 ccacggcctt cgtcacccga tcgcggaagt cgaaaggcaa ctgcggcagg atgccggcga
     1741 gcgcccaccc attcttttcg atgttgccga tgatctcggg ctccagcgtc agcagcttgg
     1801 cgaccagcgt cttgtcgcgc gt
//
LOCUS       DATAIQ010000996         1769 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_354556, whole genome shotgun sequence.
ACCESSION   DATAIQ010000996 DATAIQ010000000
VERSION     DATAIQ010000996.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1769)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1769)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1769
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_354556"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1308)
                     /gene="hflX"
                     /locus_tag="VHN20_16345"
     CDS             complement(<1..1308)
                     /gene="hflX"
                     /locus_tag="VHN20_16345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003600263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HEX2727393.1"
                     /translation="MTEPRSPGEERLQRLAEPEKEVAAGTRTLVVGPYLSRRRRPRGD
                     RPDEAISNPRPVEARLDEAVGLARAIDLDVAGSTTVTLSALRPATYLGKGKVEDVAAW
                     VKAENAGLVVMDCALSPVQQRNLEKEWGAKVIDRTGLILEIFGRRAHTREGSLQVELA
                     HLSYQKSRLVRSWTHLERQRGGFGFLGGPGETQIEADRRLIQERMTRIERDLGSVTQT
                     RALHRASRRRVPYPIAALVGYTNAGKSTLFNRLTAAGVLAENMLFATLDPTSRAIKLP
                     HGENAILSDTVGFISDLPTMLVAAFRATLEDVIEADVLLHVRDISHGETEAEAGDVQR
                     VLRDLGINPEDRQRVIEVWNKADLLAPDERERLAATVERMPADERPVLVSAATGDGLD
                     RLLRAIELRIAKGRPTFQVILDPADGQGLNWLYEQGEVLDRRTD"
     gene            complement(1310..1564)
                     /gene="hfq"
                     /locus_tag="VHN20_16350"
     CDS             complement(1310..1564)
                     /gene="hfq"
                     /locus_tag="VHN20_16350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007563033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone Hfq"
                     /protein_id="HEX2727394.1"
                     /translation="MASDRAQNLQDTFLNHVRKNKIPLTIFLVNGVKLQGVVTWFDNF
                     CVLLRRDGHSQLVYKHAISTIMPGHPVQLFEQADETAEKA"
BASE COUNT          266 a          600 c          593 g          310 t
ORIGIN      
        1 gtcggtgcgc cggtcgagca cctcgccctg ctcgtatagc cagttgagcc cctgcccgtc
       61 ggcggggtcg aggatgacct ggaaggtcgg gcgccccttg gcgatgcgca gctcgatcgc
      121 cctgagaagc ctgtcgagcc cgtcgccagt cgcggccgag acgaggacgg ggcgctcgtc
      181 ggcgggcatc cgctcgaccg tggcggcgag ccgctcgcgc tcgtcgggag cgagcagatc
      241 ggccttgttc cagacctcga tcacccgctg ccggtcttcc ggattgatgc cgagatcgcg
      301 cagcacgcgc tgcacgtcgc cggcctcggc ctcggtctcg ccgtgcgaga tgtcgcgcac
      361 gtgcagaagc acgtcggcct cgatcacgtc ctcgagcgtc gcccggaagg ccgccaccag
      421 catggtgggc agatcggaga tgaagccgac ggtgtcggac aggatggcgt tctcgccgtg
      481 cggcagcttg atcgcccgcg acgtcggatc gagggtcgcg aacagcatgt tctcggccag
      541 cacgccggcc gccgtcaggc gattgaacag cgtcgacttg ccggcattcg tgtagccgac
      601 cagggccgcg atcggatacg gcacccgccg ccggctggcg cggtgcagcg cccgggtttg
      661 cgtcacgctc ccgaggtcgc gctcgatgcg ggtcatgcgc tcctggatga gacgccggtc
      721 ggcttcgatc tgggtctcgc cggggccgcc gagaaagccg aagccgccgc gctggcgctc
      781 gagatgggtc cacgaccgca ccagccggct cttctggtac gacagatgcg ccagttcgac
      841 ctggagcgag ccttcgcgcg tatgcgcccg gcgcccgaag atctcgagga tcaggccggt
      901 gcggtcgatg accttggcgc cccattcctt ctcgaggttg cgctgctgca ccgggctcag
      961 cgcacaatcc atcacgacga gcccggcatt ctcggccttc acccaggcgg cgacgtcctc
     1021 gaccttgcct ttgccgagat aggttgccgg ccgcaacgcg gagagcgtca cggtcgtcga
     1081 cccggccacg tcgaggtcga tggcccgggc gaggccgacc gcctcgtcga ggcgcgcctc
     1141 caccggtcgg ggattggaaa tggcttcgtc gggccgatcg ccgcgcgggc gccgcctgcg
     1201 ggacagatag gggccgacca caagcgtgcg ggtgcccgcc gcgacctctt tctccggctc
     1261 cgccagcctt tgcaggcgct cttcgcctgg agacctaggc tccgtcacct cacgcctttt
     1321 cggccgtctc gtccgcctgc tcgaacaact gcaccgggtg tccgggcatg atggtcgaga
     1381 tcgcgtgttt gtagacgagt tgcgaatgcc cgtcccggcg cagaagcaca cagaaattgt
     1441 cgaaccaagt cacaacgccc tgaagcttca cgccattgac gagaaagatc gtgagcggga
     1501 tcttgttctt gcggacatga ttgagaaacg tgtcctggag gttttgcgcg cgatcgctcg
     1561 ccatcgaagt tgcctcgccg gcccgttgcc gccggtcttg gcacgggccg ccccatggtt
     1621 gatcgtccgc gcatgcgcgg ccctgaccgg cccgatcatt acacggtgaa gcctaggttt
     1681 tcgcaagagg ggcggaggcc acgcttacgt aatcttttcg caaaaacctg gttcaggccc
     1741 cgattccgag cgatttcagt ttccggtgc
//
LOCUS       DATAIQ010000997         2310 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_354622, whole genome shotgun sequence.
ACCESSION   DATAIQ010000997 DATAIQ010000000
VERSION     DATAIQ010000997.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2310)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2310)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2310
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_354622"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1276
                     /locus_tag="VHN20_16355"
     CDS             <1..1276
                     /locus_tag="VHN20_16355"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEX2727395.1"
                     /translation="DYELPNAHVLESTVDRALNVAMNEPKGPVYLTLPREVLASSVKG
                     YAYASPSRHRTPSPPFPDTRALDEAAAIIAAAENPLIITANAGRNEEDVAKLAALAEI
                     FAIPVSQRKPRYVCLPSDHPMHLGFNPDPLLDAADVIVVIDCDVPWIPGKKAPGRDCK
                     VIHLGADPLFANYPLRGFAADLAITGVLGATLPLLAQALESRVAGAKDRIEARRRRIA
                     ERREHQRGRWREMLENAHGAPMHPVWVSHCLDQAKGTDGIVIKESPVSLEHLTFSKPG
                     RFFSVGAAGGLGWGLGTALGVKAAVPDELVICTVGDGAYMFGNPLPAHYVAKAEKLPI
                     LTVVFNNEMWGAVKRNTREVYPDGFAARSNREPLTYFEPGTRFEKAVEAVDGYGERVE
                     DPAEMPAAIERALTAITRDKRQALLNVICRGP"
     gene            1306..>2310
                     /locus_tag="VHN20_16360"
     CDS             1306..>2310
                     /locus_tag="VHN20_16360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727396.1"
                     /translation="MKAITGIVAAAAGLAMSGMCALAQVGPDHFKGKNFEILVGYETG
                     GGYDIYARALARHIGRHLPGNPAVVVKNMPGAQSRQAANYLYNIAPKDGSVIATIARG
                     LPTEELLGAPGIRFEGQKLTWVGSMNNEVSVGVAWHTSPVKTIEEARQREMIVGGIAD
                     SIMFAKVMNAVLDTKLKIVSGYRSGGEVSLALERGEVHGRMGWSWSSVLSTNPEWLRD
                     RKIINMLQFSTTKHADLPDVPLVTELARNEDDKALLELVFSRQVIGRPFIAPPLSPGI
                     RDMLRKAFEDTMRDPVFLADMAKARLEVNPVSGQEVEALINRLFRTPPAVVARAKTIV
                     P"
BASE COUNT          389 a          804 c          763 g          354 t
ORIGIN      
        1 ggactacgag ctgccgaacg cgcacgtgct cgaatcgacg gtcgaccggg cgctcaacgt
       61 cgccatgaac gagcctaagg ggccggtcta cctgaccctg ccgcgggaag tcctcgcctc
      121 ctcggtcaag ggctacgcct acgcgtcgcc gtcgcggcat cgcacgccgt cgccgccgtt
      181 cccggacacg cgcgctctcg acgaggctgc cgcgatcatc gccgcggcgg agaacccgct
      241 gatcatcacc gccaacgccg ggcgcaacga ggaggacgtc gccaaactcg ccgcgctcgc
      301 cgagatattc gccattcccg tgagccagcg gaagccgcgc tacgtgtgcc tgccgagcga
      361 ccacccgatg catctcggct tcaacccgga tccgctcctc gacgcggccg acgtcatcgt
      421 ggtgatcgat tgcgacgtgc cgtggattcc cggcaagaag gccccggggc gcgactgcaa
      481 ggtcatccat ctcggcgccg atccgctctt cgcgaactat ccgctgcgcg gctttgccgc
      541 cgatctcgcc atcacgggcg tgctcggcgc cacgcttccg ctgctggcgc aggcgctcga
      601 atcccgggtc gcgggcgcga aggatcgcat cgaggcgcgg cgccgccgta tcgcagagcg
      661 gcgcgagcac cagcgtgggc gctggcgcga gatgctcgag aacgcgcacg gcgctcccat
      721 gcacccggtc tgggtcagcc actgcctcga ccaggcgaag gggaccgacg gcatcgtcat
      781 caaggaatca ccggtctcgc tcgagcacct caccttctcg aagccgggca ggttcttctc
      841 ggtcggcgcg gcaggcggcc tcggctgggg tctcggcacg gcgcttggcg tcaaggcggc
      901 ggttccggac gagctcgtga tctgcacggt cggcgacggc gcctacatgt tcggcaatcc
      961 gttgccggcg cattacgtcg ccaaggccga gaagcttccg atcctgacgg tcgtgttcaa
     1021 caacgagatg tggggcgcag tgaaacgcaa cacgcgcgag gtctatcccg acggtttcgc
     1081 ggcgcgcagc aaccgcgagc cgctcaccta tttcgagccg ggcacgcgtt tcgagaaggc
     1141 cgtcgaggct gtcgacggtt acggcgagcg cgtcgaggac ccggccgaga tgcccgcggc
     1201 catcgagcgg gcgctcaccg ccatcacgcg cgacaagcgg caggcgttgc tcaacgtgat
     1261 ctgccgcggg ccatgaccat cagctttttc gggggacata tgatgatgaa ggcgatcact
     1321 ggtatcgttg cagcggcggc cggccttgcc atgtccggca tgtgcgccct cgcgcaggtc
     1381 ggccctgacc atttcaaggg caagaacttc gagatcctcg tcggctacga gaccggcggc
     1441 ggatatgaca tctacgcgcg cgccctggcg cgccacatcg gccgccacct gccgggcaac
     1501 ccagcggtcg tcgtcaagaa catgcccggc gcgcagagcc gccaggccgc caactatctc
     1561 tacaacatcg cgcccaagga cggctcggtg atcgccacga tcgcgcgcgg cctgccgacc
     1621 gaggagctgc tcggcgcgcc cggcatccgc ttcgagggcc agaagctgac ctgggtcggc
     1681 agcatgaaca acgaggtgag cgtcggcgtc gcctggcaca cctcgccggt caagaccatc
     1741 gaggaggcgc ggcagcgcga gatgatcgtc ggcggcattg ccgacagcat catgttcgcc
     1801 aaggtgatga acgcggtgct cgacaccaag ctcaagatcg tcagtggcta tcgcagcggc
     1861 ggcgaggtca gtctcgcgct cgagcgcggc gaggtgcacg gccgcatggg ctggtcgtgg
     1921 tcgagcgttc tcagcaccaa tccggaatgg ctgcgcgatc gcaagatcat caacatgctc
     1981 cagttctcga ccaccaagca tgccgacctc cccgacgtgc cgctggtcac cgagctcgcc
     2041 cgcaacgagg acgacaaggc gctgctggag cttgtcttct cgcgccaggt gatcggccgc
     2101 cccttcatcg cgccgccgct gtcgccgggc atccgggaca tgctgcgcaa ggccttcgag
     2161 gacaccatgc gcgatccggt cttcctggcc gacatggcga aggccaggct cgaggtgaat
     2221 ccggtctcgg gacaagaggt ggaggcgctc atcaaccgcc tgttcaggac gccgccggcc
     2281 gtggtcgcgc gcgccaagac gatcgtcccg
//
LOCUS       DATAIQ010000998         2086 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_216876, whole genome shotgun sequence.
ACCESSION   DATAIQ010000998 DATAIQ010000000
VERSION     DATAIQ010000998.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2086)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2086)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2086
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_216876"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(386..1555)
                     /locus_tag="VHN20_16365"
     CDS             complement(386..1555)
                     /locus_tag="VHN20_16365"
                     /inference="COORDINATES: protein motif:HMM:NF015823.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-type transport auxiliary lipoprotein family
                     protein"
                     /protein_id="HEX2727397.1"
                     /translation="METRARYATIGLFALAIIAAAFGFVYWLRGTGGPDKALYRIRFD
                     GSVGGLTTGSPVTFNGVPIGEITGITLDKDDANRTSVVAAVGRATPVRSDSKVAIETQ
                     GFLGAPTLALSGGSGAPLVQSGDAPPVIEAGAAPQDLPTVARGALRRFDDLVGDNAAD
                     LRDTVANLKTFTGVLARNSGRIEGILASLEKLGGGSSQPTAQVYELTAPALQLAAVPD
                     AQLSVAEPSAIIAFDTQKILLRSRDGVTHPAEGGQWADTIPKLLQAKIVQTFENADYM
                     RAVRAGDSFSSDRQLLLDLRRFDVSKEPERLAHVEFTARIVADGKVADGRKFRATAAV
                     TGDDAASAASGLNHAFADAAVDLVTWAASATSAMDLQPPATSAVQPDAPAAPAAR"
     gene            complement(1561..2046)
                     /locus_tag="VHN20_16370"
     CDS             complement(1561..2046)
                     /locus_tag="VHN20_16370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727398.1"
                     /translation="MRLPAAILTLVVAHAGAAHSQSRGFTFAMLSGAWSGTGSVTLSS
                     GNVERIRCRASYEVVPSGNAFQQKLRCTSDTYDFNLQSSVVRTGAETISGTWTEVTRN
                     ANGNISGRISGSSINANIQGPAFAASLGMTVQADRQTVSIRSQGAELSSISITLRRGA
                     G"
BASE COUNT          307 a          677 c          748 g          354 t
ORIGIN      
        1 ctgcgccgct tcgcccattg cgaggtgttc gtcgacgggc tcaggaaggc gggtgtgcct
       61 gagtgaactc gctcagcctg cggcgacgcg gcgggcgcgg aactcggcct gcacgtgcca
      121 gcttgcgccc tgatccagcg agcgctcgct cgccgcggcc atgatgggtg gtaccgtcgt
      181 ttgcctgcac gacagcatcc atctcccaat cgccgatcag ccagccgcac aggccgagtt
      241 tgtcggcgct gtcggcgact ggaccgtcgc tgcggagggc attcatgaag cagtcgtgac
      301 gcggaggcat ggccagacct ttcatcttcg ctttgtctcg gccgcgcatc ggagcttggg
      361 gaagatgcac cgcctgtgcg gtcggtcacc gtgcggcggg tgcggcgggt gcgtccggtt
      421 gcaccgccga ggtcgcgggc ggttgcaggt ccattgccga tgtggccgat gccgcccacg
      481 tgacgagatc gacggcggcg tcggcgaagg cgtggttcag gccggatgca gccgacgcgg
      541 cgtcgtcgcc ggtcaccgcc gcggtagcgc ggaactttcg cccgtccgcc accttgccgt
      601 cggcgacgat cctggccgtg aactcgacat gcgccagacg ttcgggctcc ttggacacgt
      661 cgaaccggcg caggtccagc agcagctggc ggtcggagga gaagctgtcg ccggcccgca
      721 cggcgcgcat gtagtcggca ttctcgaagg tctggacgat cttggcctgc agcagcttgg
      781 gtatcgtgtc cgcccactgg ccgccctcgg ccgggtgcgt gacgccgtca cgggaacgga
      841 gcaggatttt ctgcgtgtcg aaggcgatga tggcggacgg ctcggccacc gagagctgcg
      901 cgtcgggaac ggccgccagc tgcagcgcgg gcgctgtcag ctcgtagact tgcgcggtcg
      961 gctggctgga gccgccgccg agcttctcga ggcttgccag aattccttcg atgcggccgg
     1021 agttccgcgc caataccccg gtgaacgtct tgaggttggc cacggtgtcg cggaggtccg
     1081 cggcattgtc gccgacgagg tcgtcgaagc ggcggagcgc gccgcgcgcc acggtcggca
     1141 gatcctgcgg cgcggccccg gcctcgatca cgggaggcgc gtcgccggat tgcacgagcg
     1201 gagcgccgga ccctcccgac aaggcgagcg tcggcgcgcc gagaaacccc tgggtctcga
     1261 tggcgacctt gctgtcgctg cggaccggcg tagcgcgccc caccgcggca acgacgctcg
     1321 tccggttggc gtcgtccttg tcgagggtta tcccggtgat ctcgccgatc gggacgccgt
     1381 tgaaggtgac gggagagccg gtggtgagcc cgccgaccga tccgtcgaaa cgaatccgat
     1441 agagggcctt gtcgggacct cccgtgccgc ggagccagta cacaaatccg aacgccgcag
     1501 cgatgatggc aagggcgaag agccctatgg tggcgtagcg ggctcttgtc tccatcgcgc
     1561 ctatcctgcc cctcgcctga gcgtgatcga gatggacgag agctcggcgc cttgcgagcg
     1621 gatgctgacc gtctgacggt cggcctgaac ggtcatgccg agggacgccg caaaggccgg
     1681 gccctggatg ttcgcgttga tggagctgcc gctgatccgg cccgagatgt tgccgttggc
     1741 gttgcgcgtc acctcggtcc aggtcccgga gatggtttcc gcgccggtgc ggaccacgct
     1801 tgactgcagg ttgaagtcgt aggtgtcgct cgtgcagcgg agcttctgct gaaaagcgtt
     1861 gccgctgggg acgacctcgt agctggcacg gcaacgaatg cgttcgacgt tgccggacga
     1921 cagcgtcacg cttcccgtgc cgctccacgc ccccgacagc atggcgaagg taaatccgcg
     1981 gctttgcgag tgggccgcgc ccgcatgggc gacgacaagc gtgaggatcg cagctggcaa
     2041 gcgcatcgac ctacctccgt ctccccgcct gaagattagc gcgaac
//
LOCUS       DATAIQ010000999         2207 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_216887, whole genome shotgun sequence.
ACCESSION   DATAIQ010000999 DATAIQ010000000
VERSION     DATAIQ010000999.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2207)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2207)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2207
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_216887"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(36..1037)
                     /locus_tag="VHN20_16375"
     CDS             complement(36..1037)
                     /locus_tag="VHN20_16375"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX2727399.1"
                     /translation="MSATAPTRRHLLALIGGLAALDSRSVAGGGESLKRIGVLMGLAD
                     DAEGRARLGAFIDALKERGWESGKTAYFDVRWLSGERGTGAQHARALADTADVILAAN
                     AIAVDLLIEARCAKPIVFISIVDHRQRPRGAATSPVSKLTGLMTFEPELARHWANYLR
                     EAMPDARPLTLMFNPDTASYAQEAYARVFAPATKALGATPRAARVRSVADIERAFASI
                     DAEDGGLAIMTDPFMTVNARLLVDLATRHGVPTIYPWSFFVKMGGLMSYGPDRIEIFA
                     RAAGYVDRVLRGADPRELPVEGPSKPQLVINVKTAFSMRLRLPPALMIRAHMLIPGD"
     gene            complement(1231..1371)
                     /locus_tag="VHN20_16380"
     CDS             complement(1231..1371)
                     /locus_tag="VHN20_16380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727400.1"
                     /translation="MNLIIGANVAAFTCFIAIGLTLNRGASSPRERALKEQANERARA
                     AA"
     gene            1692..>2207
                     /locus_tag="VHN20_16385"
     CDS             1692..>2207
                     /locus_tag="VHN20_16385"
                     /inference="COORDINATES: protein motif:HMM:TIGR01444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FkbM family methyltransferase"
                     /protein_id="HEX2727401.1"
                     /translation="MSGDGAPPMPRGRMTEDVHSILERVSRMDEAWSSFERVHLGRLL
                     AYLDVDCVFDVGANHGQYAERLRNDVGFSGHIVSFEPVTELAAELREKCRHDDKWHVR
                     EIALDREAGPAKFNVMASDEFSSLLEPTTDEVDEFRDLNKVVRSIEVARSTLDAEFER
                     FGALGMERPFLK"
BASE COUNT          355 a          728 c          744 g          380 t
ORIGIN      
        1 tctcgatcgc ttccggcgtc cccttcgccg ccccgttaat cgccggggat cagcatatgc
       61 gcccggatca tcagtgccgg aggcaagcgc aacctcatcg agaaggcggt cttgacgttg
      121 atcaccagct gaggcttcga aggcccctcg accgggagct cgcgcgggtc cgcgcccctg
      181 agcacgcggt cgacgtaacc tgcggcgcgc gcgaagatct cgattcggtc cgggccgtag
      241 ctcatcaggc cacccatctt cacgaagaag gaccaggggt agatcgtggg caccccgtgc
      301 ctggttgcca gatcgacgag cagccgcgca ttcaccgtca tgaacgggtc ggtcatgatg
      361 gcgaggccgc catcttccgc gtcgatgctc gcgaaggccc gttcgatgtc ggcaacgctg
      421 cgcacgcgtg ccgcgcgcgg cgtggccccg agcgccttgg tggccggcgc gaacacgcgc
      481 gcataggctt cctgcgcgta ggaggcggta tccggattga acatcagcgt gagcgggcgc
      541 gcatccggca tggcctcgcg aaggtaattc gcccaatggc gcgcgagctc cggctcgaag
      601 gtcatgaggc cggtcagctt cgagaccggg ctcgtggcag cgcctctggg gcgttggcgg
      661 tggtcgacga tggaaatgaa gacgatcggc ttcgcgcagc gagcctcgat caggaggtcg
      721 acggcaatgg cattggccgc aaggatgacg tcggccgtat cggcgagggc cctcgcatgt
      781 tgtgccccgg tgccgcgctc gcccgagagc cagcggacgt cgaaatacgc ggtcttgcct
      841 gattcccagc cacgttcctt gagcgcgtcg atgaacgccc ccagccgcgc cctgccctcc
      901 gcgtcgtcgg caaggcccat cagcacgccg atccgcttca atgactcccc gccgccggcg
      961 acggagcggc tgtcgagcgc cgccagtccg ccgatgaggg cgaggaggtg ccggcgcgtt
     1021 ggcgcggtgg cgctcatggt cagccggttc gtgtgctgct cccgcaaccg cggcccgcac
     1081 ggtcgtggca atgactggaa tccgcggacg acccggactc cccgtcatca tcgctcgggc
     1141 ctcgtttaga aaccgttcct gcgccggagc gccgaactcc gcagcataca ggcggctgat
     1201 cctcccctcc cttcgatgcc tgacccggct tcaggcggca gcccgggcgc gctcgttcgc
     1261 ctgctccttc agggcccgct cgcgcgggct cgaggccccg cggttcaatg tgagcccgat
     1321 cgcgatgaag cacgtgaaag cggccacgtt ggcgccgata atgaggttca tgacggacat
     1381 tcgctgactc ttctccttcg ggacgcccac ccggctggtg ccgcccgccc gacggcccga
     1441 ctagccgcgc gatatttcag gagcatttcg tctcgtgttt cgtggccgac acacggcccg
     1501 ccggcacccg attgccacgc tccataccgc cgcaggcgct ggggcggctg gcggcgagga
     1561 tggggcggga ctattcctgt atcggtcgag ggcttcgatg gcggcgtctc ctatgcgggg
     1621 cgacaaggca accccgcggg tcgttccgcg tggccagctg gaaccttccc gaggggccct
     1681 gcgcgcatag tgtgagcggc gatggcgccc cgccaatgcc gaggggccgg atgaccgagg
     1741 acgtgcacag catcttggag cgcgtttcac ggatggacga ggcgtggtcc tcgttcgagc
     1801 gcgtgcatct cggccggctg ctcgcatacc tcgatgtcga ctgcgtgttc gacgtcggtg
     1861 ccaatcatgg tcagtatgcc gaacgcctgc gcaatgacgt cggatttagc ggccacatcg
     1921 tctcgttcga gcccgttacc gagcttgccg ccgagttgcg cgaaaaatgc aggcacgatg
     1981 acaagtggca cgtccgggag attgctctcg acagggaagc gggaccggcg aagttcaacg
     2041 tcatggcgtc ggatgaattc agctcgcttc tcgagccgac gaccgacgag gtcgacgagt
     2101 tcagagactt gaacaaggtc gtgaggtcga tcgaggtcgc aagatcgacg ctcgatgcgg
     2161 agttcgagag attcggcgct ctcggcatgg agcgcccctt cctgaag
//
LOCUS       DATAIQ010001000         1536 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_354762, whole genome shotgun sequence.
ACCESSION   DATAIQ010001000 DATAIQ010000000
VERSION     DATAIQ010001000.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1536)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1536)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1536
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_354762"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..572
                     /locus_tag="VHN20_16390"
     CDS             <1..572
                     /locus_tag="VHN20_16390"
                     /inference="COORDINATES: protein motif:HMM:NF012573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727402.1"
                     /translation="DGIDQMYGGAGADTMRGDAGDDRMNGEDGDDLMFGGTGADLLLG
                     GAGNDNMFGDDGNDRMFGDAGDDRMTGGAGDDVLTGGLGRDQMVGSAGADRFDFNVLA
                     DSVVGANRDVVYFERAEGDSIDVSNIDANATIGGNQAFTFIGTAAFSGAAGQMRFSGG
                     VLAGDVNGDGTADFEVRIGGALGGGDIIL"
     gene            complement(645..>1536)
                     /gene="rmuC"
                     /locus_tag="VHN20_16395"
     CDS             complement(645..>1536)
                     /gene="rmuC"
                     /locus_tag="VHN20_16395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA recombination protein RmuC"
                     /protein_id="HEX2727403.1"
                     /translation="GLQHRVGQGLEASTRHQSEHLSRLNERLAVIDAAQKNLTDLTGE
                     VVGLKEVLSNKQTRGAYGQGRMEAIIRDGLPGGAYEFQHTLSNRTRPDCVIRLPGDPR
                     GLVVDAKFPLEGFTLFREAKGDEARARAAQRVRADVGTHIKDLADKYFIAGETQDIAL
                     MFVPAESLYADLQEHFEDVVQRAHRARVVIVSPSLLALAIQVLQALVRDARIREEAAV
                     IQIEVTKLLEDVNRLRSRVDKLDTHFRQAEDDLAQIRTSADKISSRGQKIEALEFEDG
                     EAGARAELLRAQGPSLRAVE"
BASE COUNT          221 a          520 c          551 g          244 t
ORIGIN      
        1 gcgacggcat cgaccagatg tacggcggcg ctggcgccga cacgatgcgc ggcgacgcag
       61 gcgacgaccg catgaacggc gaggacggcg acgacctcat gttcggcggc accggcgccg
      121 atctgcttct cggcggcgcc ggcaacgaca acatgttcgg cgacgacggc aacgaccgga
      181 tgttcggcga cgccggtgac gaccgcatga ccggcggcgc cggcgacgac gtgctgaccg
      241 gcggcctcgg ccgcgaccag atggtgggca gcgccggcgc cgaccgcttc gacttcaatg
      301 tcttggcgga ctcggtcgtc ggcgccaacc gcgacgtggt ctatttcgag cgcgccgagg
      361 gcgacagcat cgacgtgtcc aacatcgacg ccaacgccac gatcggcggc aaccaggcgt
      421 tcacgttcat cggcacggcg gcgttctcgg gcgccgccgg gcagatgcgg ttcagcggcg
      481 gcgtcctcgc cggtgacgtc aacggcgacg gcaccgccga tttcgaggtg aggatcggcg
      541 gcgccctcgg tggcggcgac atcatcctgt agaccctgat cgcgcggtgc cggttcggcg
      601 atgcgggact cgcttcgccg aaggtggcgc cggagcgaaa ggctctattc gacggcgcgt
      661 aacgaggggc cttgcgcgcg caaaagctcg gcgcgggcgc cggcttcgcc gtcctcgaac
      721 tcgagcgcct cgatcttctg tccgcggctg gagatcttgt cggccgaggt tctgatctgg
      781 gcgaggtcgt cctcggcctg gcggaaatgc gtgtcgagct tgtcgacgcg gctgcgcagc
      841 cggttcacgt cctccagcag cttcgtcacc tcgatctgga tcacggccgc ctcctcgcgg
      901 atcctggcgt cgcgcaccag cgcctgcagc acctggatgg cgagcgccag cagcgagggc
      961 gagacgatca cgacgcgcgc ccggtgcgcg cgctgcacga cgtcctcgaa atgctcctgc
     1021 aggtcggcat agagcgattc cgccggcacg aacatcaggg cgatgtcctg cgtctcgccg
     1081 gcgatgaaat acttgtctgc aaggtccttg atgtgcgtgc cgacgtcggc gcgcacgcgc
     1141 tgcgcggccc gggcgcgcgc ctcgtcgccc ttcgcctccc ggaacagcgt gaaaccctcg
     1201 agcgggaact tggcgtcgac cacgaggccg cgcggatcgc cgggcaggcg gatcacgcag
     1261 tcgggccggg tgcggttgga gagggtgtgc tggaattcgt aggcgccgcc gggcaggccg
     1321 tcgcggatga tcgcttccat gcggccctgg ccataggcgc cgcgcgtctg cttgttcgac
     1381 agcacctcct tgagcccgac cacctcgccg gtgaggtcgg tgaggttttt ctgcgccgcg
     1441 tcgatcacgg cgaggcgctc gttgagcctc gacagatgct cgctttggtg tcgcgtcgag
     1501 gcctcgaggc cctggccgac gcggtgctgc agcccc
//
LOCUS       DATAIQ010001001         2057 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_262703, whole genome shotgun sequence.
ACCESSION   DATAIQ010001001 DATAIQ010000000
VERSION     DATAIQ010001001.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2057)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2057)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2057
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_262703"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..212
                     /locus_tag="VHN20_16400"
     CDS             <1..212
                     /locus_tag="VHN20_16400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016921731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727404.1"
                     /translation="VAAPIRRGFGTRLIERTLTQDLGGGVQLTYEPAGAMCVMDVPLG
                     DAADGQDPRASGQVAGQTGPLPALS"
     gene            complement(240..632)
                     /locus_tag="VHN20_16405"
     CDS             complement(240..632)
                     /locus_tag="VHN20_16405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727405.1"
                     /translation="MSLPTSFIHIDRHAAWGARPACVGIMLGFLGVIAAGAMLEPGRA
                     EPQAPLEATARIGAVASSPCAPHDAVVGNEGGDPYGFYVFSRDHDLAAMRAACTRDVA
                     DGQPDGADRAAQNMLAQNDPPGPLPAPR"
     gene            868..1392
                     /locus_tag="VHN20_16410"
     CDS             868..1392
                     /locus_tag="VHN20_16410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010685720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEX2727406.1"
                     /translation="MTGEERIRFSNLVSPHLGDGFALARWIAGNAADAEDIVQEAALR
                     AYRGLNGYAGGNPRAWFLAIVRNASYTWLRKNRPAEVVSMADVETMERADDSLGGATP
                     EAAVMAKADAALLKGAMMSLPAEFRETLVLREIHGLEYREIAVVTGAPVGTVMSRLSR
                     ARRRLFAILAEAAA"
     gene            1389..>2057
                     /locus_tag="VHN20_16415"
     CDS             1389..>2057
                     /locus_tag="VHN20_16415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-sigma factor"
                     /protein_id="HEX2727407.1"
                     /translation="MTGARDDDERLLVHAYLDGELDPAAAVALERRMAEEPALAAERG
                     RIETLRGLLQEHLPPDAPPPDLRRRIEASLGLHATASKTSWRAMAASVAVGAFIAGGS
                     TWALLQPQSPHDVSDAIVASHIRGLMATQATDVASSDRHTVKPWFNGRIPQAPRVVDL
                     SAADFPLLGGRIDVIDRTPVPTLVYRRRQHVISLTAVPSDERAAPRPRTIAGYNMLSW
                     SGDGV"
BASE COUNT          297 a          720 c          705 g          335 t
ORIGIN      
        1 ctgtcgcggc tccaatccga cggggtttcg gcacgcgtct gatcgagcgg accctcaccc
       61 aggatctcgg cggcggtgtc cagctcacgt acgagcccgc gggcgccatg tgcgtcatgg
      121 acgtcccgct cggggacgcc gccgatggac aggaccctcg cgcctcaggc caggtcgccg
      181 gccaaaccgg acctttgccc gcgctttcct gaagcgggtg ccgccgtggg cacctacgct
      241 caacgcggcg caggcagcgg tcccggcgga tcgttctgcg ccagcatgtt ttgtgctgcc
      301 ctgtccgccc cgtccggctg gccatccgcg acatcgcgcg tgcacgcggc gcgcatcgcg
      361 gcgaggtcgt gatcgcggct gaacacgtag aatccgtaag gatcgccgcc ctcgttgccg
      421 acgaccgcat cgtgcggcgc gcagggcgag gacgcgacgg cgccgatcct cgccgtcgct
      481 tcgagagggg cctgcggctc ggcgcggccc ggttcgagca tggccccggc tgcgatcacg
      541 ccgaggaaac ccagcatgat gccgacgcat gcgggccgcg ccccccaggc tgcgtgtcgg
      601 tcgatgtgga tgaaggatgt gggcaacgac atggctcgat ctccgcatcc ctggttcggt
      661 gaggttgctc ctcacgcctc cactttgcgt cgccgtcccg cgtctcgtcg tgcggccgag
      721 gaccggcgtc tgggaaagga gaccacgtca gggctgcaac tattcccgcg ttcgaggaaa
      781 aatattttca cccggcgcgg gaataagcct gggcaagcgc gagtctgtgt atgttaggct
      841 tccggtgaag cgtgccgggg gcaaggcgtg accggtgagg agcggatacg gttttcgaat
      901 ctcgtttcgc ctcatctggg tgacggcttt gcccttgcgc gatggatcgc cggcaatgcc
      961 gcagatgcgg aggatatcgt ccaggaggct gcgctgcgcg cctaccgcgg actcaacggc
     1021 tatgcaggcg gcaatccgcg cgcgtggttt ttggccatcg tcagaaatgc ctcctacacc
     1081 tggctcagga agaaccgtcc cgccgaagtc gtcagcatgg ccgacgtcga gacgatggag
     1141 cgcgccgacg acagccttgg cggcgcgacc ccggaggcgg ccgtgatggc gaaggcggat
     1201 gcggcgctcc tcaaaggcgc gatgatgagc ctgccggcgg aattccgcga gaccctggtt
     1261 ctgcgcgaga tccacggcct cgaatatcgc gagatcgctg ttgtcaccgg cgccccggtc
     1321 ggcaccgtca tgtcccggct gtcgcgcgcg cgccgccgcc tctttgcgat cctcgcggag
     1381 gcggcggcat gaccggcgct cgcgacgacg acgagcgcct gctcgtccac gcctatctcg
     1441 acggcgagct cgatccggca gccgccgtcg cgctggagcg ccgcatggcc gaggagccgg
     1501 cgctcgcggc cgagcgcggg cgcatcgaga ctttgcgcgg gcttttgcag gagcacctgc
     1561 cacccgacgc gccgccgccg gacttgcgcc gccgcatcga ggcttcgctc gggctgcacg
     1621 caactgcttc taagacgtcg tggcgggcga tggcggcgtc ggtcgcggtc ggggcgttca
     1681 tcgccggcgg ctcgacctgg gcgctgctgc agccgcaatc tccgcacgat gtgagcgacg
     1741 cgatcgtggc gagccacatc cgcggcctca tggcgacgca ggccaccgac gtcgcctcgt
     1801 cggaccgcca tacggtgaag ccctggttca acggacgcat tccgcaggcg ccgcgcgtgg
     1861 tcgatttgag cgccgcggat ttcccgctgc tcggaggccg catcgacgtg atcgaccgca
     1921 cgcccgtgcc gaccctcgtc taccgccgcc ggcagcacgt catcagtctc accgccgtgc
     1981 cctctgacga acgcgccgcc cctcgccccc gcacgatcgc cggctacaac atgctgtcct
     2041 ggagtggcga cggcgtc
//
LOCUS       DATAIQ010001002         1713 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_164983, whole genome shotgun sequence.
ACCESSION   DATAIQ010001002 DATAIQ010000000
VERSION     DATAIQ010001002.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1713)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1713)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1713
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_164983"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            276..632
                     /locus_tag="VHN20_16420"
     CDS             276..632
                     /locus_tag="VHN20_16420"
                     /inference="COORDINATES: protein motif:HMM:NF022603.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2934 domain-containing protein"
                     /protein_id="HEX2727408.1"
                     /translation="MAKAKEPKSTATKTVKSAGARAPGANSAAPASTASRATANRRPA
                     KTAPDAPSSDVIQTGASSSGKGAGRADMSPEDIYRLIQETAYYKAKARGFAPGHEVQD
                     WIEAEAEVRMRLESRA"
     gene            835..1056
                     /locus_tag="VHN20_16425"
     CDS             835..1056
                     /locus_tag="VHN20_16425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727409.1"
                     /translation="MAVVLERWSDATHRFFEVAVDDGRRFVLRLDPETRLWELAAVFG
                     APRKPAPKPKAKTVTPAAPRKFFFPLYSK"
     gene            1100..1525
                     /locus_tag="VHN20_16430"
     CDS             1100..1525
                     /locus_tag="VHN20_16430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018266074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeeE/YedE family protein"
                     /protein_id="HEX2727410.1"
                     /translation="MVDWAHFTPWSSFGGGILIGVAAAMLLLFNGRIAGVSGIVGGLL
                     APRGGDIAWRIAFVLGLLLAAVAFVPFGKMPMPRIEAGFGMLVAAGLLVGIGTSYASG
                     CTSGHGVCGLSRLSPRSLAATVAFMGAGIVTVFVVRHLL"
     gene            1522..>1713
                     /locus_tag="VHN20_16435"
     CDS             1522..>1713
                     /locus_tag="VHN20_16435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016848216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6691 family protein"
                     /protein_id="HEX2727411.1"
                     /translation="MNPLAAFAAGLVFGIGLILSGMTDPGKVIGFLDVTGSWDPSLAF
                     VMAGAILVGFFAFAFARRRA"
BASE COUNT          261 a          613 c          542 g          297 t
ORIGIN      
        1 tgcccgtaca gcgccatgcg ccggtaggcg cgcgacttgc ggaagaccag cgtgaattcc
       61 ggcgtgcctt ccttcgatcg ccattcgtcg ccctccgcgt agcgcaccac gaatgcgacg
      121 ccggagcgcg cggcgatctg acggaaggtc tgttgagcga gcgatttcaa acggcccgga
      181 ttttaccgcc cctcgtgttc ccgatagaag tcgtcacgca actttgctag cctccggaca
      241 ctcgtaaaag caataccaag caggagaaaa ccaccatggc caaggccaaa gaacccaaga
      301 gcacagcgac caagaccgtg aaatcggccg gcgctcgtgc ccccggcgcg aattccgccg
      361 cccctgcctc gactgccagc cgcgcgactg caaaccgccg gcccgccaag accgcgccgg
      421 acgctccctc gagcgacgtc atccagacgg gcgccagctc cagcgggaaa ggcgccgggc
      481 gcgccgacat gtcgcccgag gacatctatc gcctcatcca ggagaccgcg tactacaagg
      541 ccaaggcgcg cggcttcgcg cccggccacg aggtgcagga ctggatcgag gccgaggcgg
      601 aagtccgcat gcggctggag agccgcgcct aaaaccccgc gcggtttctc cggcgtctcg
      661 ctcgaggcgc ccggcgctcg gctccaaacg gatcatcgtt tgagctgcga atcttgcttg
      721 ttatgggcac acactacgcg ccggcgccca atgaaaatct gcgtacacag caaccgcggt
      781 ccccgaggtg aagagtcccc gtgcgttttc tacctgggtg ggcggcggct gccggtggcg
      841 gtggtgctcg agcgctggtc cgacgcgacg catcgcttct tcgaggtggc ggtcgatgac
      901 ggccgccgct tcgtgctgcg cctagacccg gagacccgcc tctgggagct cgccgccgta
      961 ttcggcgcgc cccgcaagcc ggcgcccaag ccgaaggcga aaacggtaac tcctgctgcg
     1021 ccgcgtaagt ttttcttccc gctctactcc aagtaagtag ttattcgact acagccccca
     1081 agggggtgag aatgcgccgg tggtcgattg ggcgcacttc actccctgga gctcgttcgg
     1141 cggcggcatc ctgatcggcg tcgccgcggc gatgctgctg ctcttcaacg gccgcatcgc
     1201 cggggtgagc ggcatcgtcg gcggcctgct cgcacctcgc ggcggggaca tagcctggcg
     1261 catcgccttc gtcctgggcc tcctcctcgc ggccgtcgcc ttcgtcccgt tcggcaagat
     1321 gccgatgccg cgcatcgaag ccggcttcgg catgctcgtg gcggccgggc tgctggtcgg
     1381 catcgggacg agctacgcct ccggctgcac cagcggccac ggcgtctgcg gtctgtcgcg
     1441 gctctcgccc cgctcgctcg ctgccaccgt cgccttcatg ggcgccggca tcgtcaccgt
     1501 cttcgtggtg cgccacctcc tgtgaacccg ctcgccgcct tcgccgcggg actcgtcttc
     1561 ggcatcgggc tcatcctttc gggcatgacg gacccgggca aggtaatcgg cttcctggac
     1621 gtcactggca gctgggatcc gtcgctcgcc ttcgtgatgg ccggcgcgat cctcgtcgga
     1681 ttcttcgcct tcgcattcgc tcgccggcgt gcc
//
LOCUS       DATAIQ010001003         3011 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_217233, whole genome shotgun sequence.
ACCESSION   DATAIQ010001003 DATAIQ010000000
VERSION     DATAIQ010001003.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3011)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3011)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3011
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_217233"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            222..935
                     /gene="rnc"
                     /locus_tag="VHN20_16440"
     CDS             222..935
                     /gene="rnc"
                     /locus_tag="VHN20_16440"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004525 - ribonuclease III activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HEX2727412.1"
                     /translation="MARRKVDLTPLEERLGYSFKDDQFLTCALTHVSVAGGEAGRMKN
                     YQRLEFLGDRVLGLAIAEMLFASFPNASEGELSRRLSELVRRDTCADVAFAWDVGPFL
                     KLGAGEVRSGGRNNRAILADVCESIIGAVFLDGGYEAARALVEQAFGEQLNAPRRPLR
                     DPKTALQEWAQGRGLPAPTYHVVEQTGPDHAPRFQVEAHVGDLERAAGAGASKRAAEQ
                     DAALNLLRRERAWAEAEHV"
     gene            928..1839
                     /gene="era"
                     /locus_tag="VHN20_16445"
     CDS             928..1839
                     /gene="era"
                     /locus_tag="VHN20_16445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HEX2727413.1"
                     /translation="MSDQPTPTRAGFAALIGAPNAGKSTLLNALVGSKVSIVSRKVQT
                     TRTMVRGIVIEGPAQIVFVDTPGIFKPKRRLDRAMVTSAWGGAGDADVVALLIDARKG
                     VDEEAEAILAKLAELRRPRILILNKIDLIERSRLLTLAADLNARLPFAHTFMISALTG
                     DGLSELKAQLAAMMPEGPWLYPEDQISDAPLRLLAAEITREKIFERLHEELPYQSTVE
                     TEQWQERPDGSVRIEQTIYVERDSQRKIVLGKGGQTIKAIGQAARKEIAEIAETPVHL
                     FLFVKVRENWEDDPERYREMGLEFPRA"
     gene            1977..2363
                     /locus_tag="VHN20_16450"
     CDS             1977..2363
                     /locus_tag="VHN20_16450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009756523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEX2727414.1"
                     /translation="MDRRLVSSGSPYEPEIGFSRAVRVGSHIFVAGTAPIAPGGATAA
                     PDDVYGQTRRCLEIIERAIVDAGGSLAHVARTRVMLTDMTRWREAARAHGEFFGAIRP
                     ASTFVRVAGLIDPAWLVEIEADAIVG"
     gene            2758..>3011
                     /locus_tag="VHN20_16455"
     CDS             2758..>3011
                     /locus_tag="VHN20_16455"
                     /inference="COORDINATES: protein motif:HMM:NF023621.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3597 family protein"
                     /protein_id="HEX2727415.1"
                     /translation="MSIFDRIKSAIFGSAKATEAAPSGAGTSGGTTGAATAASASRPA
                     APAETSGARTSAAAPMSQVDVEAVLTGLAAKNKQKLDWRKS"
BASE COUNT          526 a          982 c         1039 g          464 t
ORIGIN      
        1 tctcgatcga cgagagtgcg tccgcctggc aggtctggga atggccctgg accgtgcgct
       61 ggagccgcat gttcaacccg atccgctaga gcatgatccg gcgaagtgga taccgcttgg
      121 ccgaaaaagg gcgcgtcccg gacgtgatcc gggatcatgc gacacaaaga gaaggagagc
      181 aggattgatt caatctgaat cgatcctgat ctagttgccg gatggcccgc cgcaaggtcg
      241 atctcactcc gcttgaagag cgcctcggct actctttcaa ggatgatcag ttcctgacct
      301 gcgcgctgac ccatgtcagc gtcgccggcg gcgaagccgg gcggatgaag aattaccagc
      361 ggctcgagtt cctcggcgac cgggtgctgg gcctcgccat tgccgagatg ctgttcgcga
      421 gctttccgaa cgccagcgaa ggcgagctgt cgcgccgcct gtccgagctc gtccgccgcg
      481 acacctgcgc cgacgtggcg ttcgcctggg acgtcgggcc tttcctcaag ctgggcgccg
      541 gcgaggtgcg ttcgggcggc cgcaacaacc gggcgatcct cgccgatgtc tgcgaatcga
      601 tcatcggcgc ggtgtttctc gacggcggct acgaggcggc gagggcgctc gtcgagcagg
      661 ccttcggcga gcagctgaat gcgccgcgcc ggcccctgcg tgatccgaag acggcgctgc
      721 aggaatgggc gcaaggccgc gggctgccgg ctcccaccta ccacgtcgtc gagcagacgg
      781 ggcccgacca cgccccgcgc ttccaggtcg aggcgcatgt cggcgacctc gagcgcgccg
      841 ccggggcggg cgccagcaag cgcgcggccg agcaggacgc ggccctgaac cttcttcggc
      901 gcgagcgcgc ctgggcggag gcggagcatg tctgaccagc cgacaccgac gcgggccggc
      961 ttcgcggccc tgatcggcgc tcccaatgcc ggcaagtcga cgctcctcaa cgcgctggtc
     1021 ggctccaagg tctcgatcgt gtcgcgtaag gtgcagacga cgcgcacgat ggtgcgcggc
     1081 atcgtgattg aagggccggc gcagatcgtg ttcgtcgaca cgcctggcat cttcaagccg
     1141 aagcggcggc tcgaccgcgc catggtgacc tcggcctggg gcggggcagg ggacgcggat
     1201 gtcgtcgcct tgctgatcga cgcgcgcaaa ggcgttgacg aggaggcgga ggccatcctc
     1261 gccaagctgg cggagctcag gcggccgagg atcctgatcc tcaacaagat cgatctgatc
     1321 gaacgctcca ggctgctgac gctggcggcc gatctcaatg cgcgcctgcc cttcgcgcat
     1381 accttcatga tctcggcgct gaccggcgac ggactttccg agctcaaggc gcagctggcg
     1441 gccatgatgc cggaagggcc gtggctttac ccggaggacc agatctccga cgcgccgctg
     1501 cgcctcctcg ccgccgagat cacgcgcgag aagatcttcg agcgcctgca cgaggaattg
     1561 ccgtaccagt cgacggtcga gaccgagcag tggcaggagc ggcccgacgg ctcggtgcgc
     1621 atcgagcaga cgatctatgt cgagcgcgac agccagcgca agatcgtgct cggcaagggt
     1681 ggccagacca tcaaggccat cggccaggcg gcgcgcaagg agatcgccga gatcgccgag
     1741 acgccggtgc atctgttcct gttcgtgaag gtgcgcgaga attgggagga cgatcccgag
     1801 cgctaccgcg agatggggct cgagtttcca agagcctgat tcagggccat gatccggcga
     1861 aggcctcgct gccaaagttg atccgggggg ggccacttcg ccgcagcgat gctgcgaacc
     1921 gataagcaaa actaagcagg cggcgtggct tcgccacgcc gcgcgggagg ccgaacatgg
     1981 accggcgtct ggtcagctca gggtcgcctt atgagccgga gatcggcttt tcacgcgccg
     2041 tccgcgtggg gtcgcacatc ttcgtcgccg gcacggcccc gatcgcgccg ggcggcgcca
     2101 ccgccgcacc cgacgacgtc tacggccaga cccggcgctg cctcgagatc atcgagcgcg
     2161 ccatcgtcga cgcgggcggc agcctcgcgc acgtggcacg gacgcgcgtc atgctgacgg
     2221 acatgacgcg ctggcgcgag gccgcccgcg cccacggtga atttttcggc gcgatccgcc
     2281 cggcctcgac cttcgtgcgg gtggccgggc tgatcgatcc ggcctggctc gtcgagatcg
     2341 aggccgatgc gatcgtcggc tagatcaatc tcccgtcgcg cctgagccga ccgcctcgcg
     2401 tttagagcat gatccggcga agtggatacc gcttcgccga gaaagatcat gcggctcaat
     2461 aagaaataga gcgggatcga ttcaatccga attgatcccg ctctaacttc gcgacgatcg
     2521 gctttgatgc gctgctgcgt gcaaccgcgt tcgcgcagtg cgacccgctc cgtcgtggca
     2581 cgagaccccc gcaagacaag ccgtcgtgtg ttgcgcgtgc cactcgtggg ggcgacgtcg
     2641 tctccctgaa gcggaaccgg aacatggtgt cggcgttcga aaggtgacgg gcggtgggac
     2701 ctcgcaggac cgcgccgtgt cgcgcagtac cggccctgca cgcagaggag aaccaaaatg
     2761 agcatcttcg accgcatcaa gtccgccatc ttcgggtccg ccaaggcgac cgaggcggcg
     2821 ccatcggggg cgggcacgtc gggaggcacc acaggagcag caacggcggc atcggcatcc
     2881 cgaccggctg caccagcaga aacatctggc gcgcggacga gtgccgcagc gccgatgtcg
     2941 caagtcgacg tcgaagccgt gctcacgggc ttggcggcga agaataagca gaagctcgac
     3001 tggcggaaat c
//
LOCUS       DATAIQ010001004         4482 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_217308, whole genome shotgun sequence.
ACCESSION   DATAIQ010001004 DATAIQ010000000
VERSION     DATAIQ010001004.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4482)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4482)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4482
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_217308"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            156..953
                     /locus_tag="VHN20_16460"
     CDS             156..953
                     /locus_tag="VHN20_16460"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020085514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="murein L,D-transpeptidase family protein"
                     /protein_id="HEX2727416.1"
                     /translation="MRRRLALLILLAALAGAVALLLKPEFAYSLRDRAVRVAGRIAPE
                     LAARWRLGNEAPLEARLTGRGFAPGSEAFIRIFKAERQLELWLRRGATFTLFQTYDVC
                     SWSGDLGPKLKEGDGQAPEGFYAVGLKQLNPRSAYYRAFDLGFPNAYDRAHGRTGSLL
                     MVHGDCLSIGCYAMTDKVIDDIYRLVEAALRNGQKEVPVHVFPFRMTAENLSRFDGSR
                     WASFWQNLKQGHDIFETTRSPPAVHACGTAYAFDAMAHGVCDPITAW"
     gene            complement(1021..3882)
                     /gene="secA"
                     /locus_tag="VHN20_16465"
     CDS             complement(1021..3882)
                     /gene="secA"
                     /locus_tag="VHN20_16465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012331687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006605 - protein targeting [Evidence IEA];
                     GO_process: GO:0006886 - intracellular protein transport
                     [Evidence IEA];
                     GO_process: GO:0017038 - protein import [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HEX2727417.1"
                     /translation="MLGALAKKVFGSANDRRVKAYRPRVDAINAMERELEVLSDEALR
                     ARTDALKAELAGGKSLDDILVPAFATVREAAKRTLGQRHFDVQLIGGMVLHEGGIAEM
                     KTGEGKTLVATLPVYLNALAGKGVHVVTVNDYLARRDADWMGQIYNFLGMSVGVIVHG
                     LDDDERKRAYDADITYGTNNEYGFDYLRDNMKYEFAQMVQRGHNFAIVDEVDSILVDE
                     ARTPLIISGPVDDRSDLYIAIDQLIPRLAKDNFELDEKQRTVNLTESGNERMEELLRE
                     SGVLKEGDLYDSHNATLVHHVNQALRAHALFQRDKDYIVRNGEVVIIDEFTGRMMPGR
                     RYSEGLHQALEAKERVQIQPENQTLASITFQNYFRLYDKLAGMTGTASTEADEFQEIY
                     SLDVVEIPTNVPVARIDEDDQVYRTVEEKYKAIIEEIEKAHLRRQPVLVGTASIEKSE
                     LLAELLAKAGYKQIDFANPEALESLYAAARDGKVTKQFAVLNARFHEQEAYIVAEAGV
                     PGAITIATNMAGRGTDIKLGGNVEMRIAQEVADLPDGPQKDARIAQIKAEVDANRTIV
                     LQAGEKADPEAGIKHDLPGGLYIIGTERHESRRIDNQLRGRSGRQGDPGRSKFFLSLK
                     DDLMRIFGSDRMDGMLQKLGLQEGEAIIHPWINKAIEKAQQKVEARNFDIRKNILKYD
                     NVMNDQRKVVFEQRREFMAMDSVRETVDEMRHGVIDDLVARHIPDGAYPEQWDIAGLK
                     AGTGSLLNLDLPVDDWAKEEGIADEEMRERLRQASDDAYAARVEKNSGEVMTYVEKQV
                     LLQTLDHLWREHIVTLDHLRQVIGWRGYAQRDPLNEYKSEAFDLFNELIGHLREQVTG
                     QLMRIEVVFQPPEPELPAMFAQHLDPVTGENELAAPQGGGFGTAPALAFASASAGDAD
                     ADVLERDPRDPASWGKVGRNELCPCGSGKKYKHCHGRFG"
     gene            4102..>4482
                     /locus_tag="VHN20_16470"
     CDS             4102..>4482
                     /locus_tag="VHN20_16470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEX2727418.1"
                     /translation="MSIVKFSLFRSGLVAVGLAAAGAPGLAVAQTGAPPAQAGAAAPS
                     GSKIVARVDGTPITEADLAVAADDPALSLPGVTDEQKRDLLVGYLIDLKIGAKAAETA
                     RVGEGADFARKLAYFRDKLLLGEHL"
BASE COUNT          657 a         1476 c         1491 g          858 t
ORIGIN      
        1 tgatgcaagg gtgcgcggcc agtaacgtta agccgtcttc cgccgtgatg ggccgttttc
       61 gaggcccgcg agaggccctt cctcccctgg ttcccaccgg ctaagccaag gcgagacatg
      121 cgttttcaga tcgaatcgct cgcgggattg ccgtgatgcg acgtcgcctt gccctgctga
      181 tcctgctggc cgcgctggcc ggcgccgtcg ctttgctgct gaagccggaa ttcgcctaca
      241 gcctgcgcga tcgcgcggtc cgcgtcgcgg gccgcatcgc ccccgaactc gcggcccgct
      301 ggcggctcgg caacgaagcc ccgctggagg cgaggttgac cgggcgcggc tttgcgcccg
      361 gcagcgaggc gttcatccgg atcttcaagg ccgagcgcca gctcgagctg tggctcaggc
      421 gcggcgcgac cttcaccctg tttcagacct atgacgtgtg cagctggtcc ggcgacctgg
      481 ggccgaagct caaggaaggc gacggccagg caccggaagg tttttatgcg gtcgggctga
      541 agcagctcaa tccgcgcagc gcctactacc gcgccttcga cctcggcttc ccgaatgcct
      601 atgaccgggc gcatggccgc accggctccc tgctcatggt gcacggcgac tgcctgtcga
      661 tcggctgtta cgcgatgacc gacaaggtca tcgacgacat ctatcgtctg gtcgaggcgg
      721 cgctgcgcaa cggccagaag gaggtgccgg ttcacgtctt cccgttccgc atgacggccg
      781 agaacctgtc gcgtttcgac ggcagccgat gggccagttt ttggcagaac ctcaagcagg
      841 gccacgacat cttcgagacg acgcgaagcc cgcctgcggt tcatgcctgc ggcaccgcct
      901 acgccttcga cgccatggcg catggcgtct gcgatccgat cacggcgtgg tgacgcgccg
      961 ggacatcccg gatctgcaaa gcgcggaaac gggatgacgc ctcgggctca ggcgctcccg
     1021 tcagccaaag cggccgtggc aatgcttgta tttcttgcct gatccgcacg ggcacagctc
     1081 gttgcggccg accttgcccc agctcgcggg atcgcgcggg tcgcgctcca ggacgtcggc
     1141 atcggcgtcg ccggccgacg ccgatgcgaa cgcgagcgcc ggtgcggtgc cgaacccgcc
     1201 gccctgcggc gccgccagct cgttctcgcc ggtgaccgga tcgagatgct gggcgaacat
     1261 cgccggcagc tcgggctcgg gcggctggaa caccacttcg atgcgcatga gctgccccgt
     1321 gacctgctcg cgcaggtgcc cgatcagctc gttgaacagg tcgaacgcct cggacttgta
     1381 ttcattgagc ggatcgcgtt gcgcatagcc gcgccagccg atcacctggc gcagatggtc
     1441 gagcgtcacg atgtgctcgc gccagaggtg gtcgagggtc tgcaggagca cctgcttctc
     1501 gacataggtc atcacctcgc cggaattctt ctcgacgcgc gccgcatagg cgtcgtcgga
     1561 ggcctggcgc aggcgctcac gcatctcctc gtcggcgatg ccctcctcct tggcccagtc
     1621 gtcgaccggc aggtcgaggt tgaggagcga gcccgtgcct gccttcaggc cggcgatgtc
     1681 ccactgctcg gggtaggcgc cgtcgggaat atgccgcgcg acgaggtcgt cgatgacgcc
     1741 gtggcgcatc tcgtcgacgg tctcgcgcac cgaatccatc gccatgaact cgcgccgctg
     1801 ctcgaacacg accttgcgct ggtcgttcat gacgttgtcg tacttgagga tgttcttgcg
     1861 gatgtcgaag ttgcgcgctt cgaccttctg ctgcgccttc tcgatcgcct tgttgatcca
     1921 cggatggatg atggcctcgc cttcctggag gccgagcttc tgcagcatcc cgtccatgcg
     1981 gtcggagccg aagatgcgca tcagatcgtc cttgagggac aggaagaact tggagcgacc
     2041 gggatcgccc tggcggcccg agcggccgcg cagctggttg tcgatgcgcc gggactcgtg
     2101 ccgttcggtg ccgatgatgt agaggccgcc gggaaggtca tgcttgatgc cggcctccgg
     2161 gtcggccttt tcgcccgcct gcagcacgat ggtccggttg gcgtcgacct cggccttgat
     2221 ctgcgcgatc ctggcatctt tctgaggccc gtccggcagg tcggccactt cctgggcgat
     2281 gcgcatctcg acgttgccgc cgagcttgat gtcggtgccg cggccggcca tgttggtggc
     2341 gatcgtgatg gcgccgggca cgccggcctc cgcgacgata taggcttcct gctcgtggaa
     2401 gcgcgcattg agcacggcga actgcttggt caccttgccg tcgcgcgccg ccgcataaag
     2461 gctctcgagc gcttccgggt tggcgaaatc gatctgcttg tacccggcct tggcgaggag
     2521 ctcggcgagc agctccgact tctcgatgga ggccgtgccg acgagcacgg gctggcggcg
     2581 cagatgcgcc ttctcgatct cctcgatgat ggccttgtac ttctcctcga ccgtgcggta
     2641 gacctggtcg tcctcgtcga tgcgggccac cggcacgttg gtcggtatct cgaccacgtc
     2701 caggctgtag atctcctgga attcgtccgc ttcggttgag gccgtgccgg tcatgcccgc
     2761 gagcttgtcg tagaggcgga agtagttctg gaacgtgatc gaggcgagcg tctggttctc
     2821 gggctggatc tgcacgcgtt ccttcgcttc gagcgcctgg tgcaggcctt ccgagtagcg
     2881 ccgtcccggc atcatgcggc cggtgaactc gtcgatgatc acgacctcgc cgttgcgcac
     2941 gatgtagtcc ttgtcgcgct ggaacagggc gtgcgcgcgc agcgcctgat tgacgtggtg
     3001 cacgagcgtg gcgttgtgcg agtcgtagag gtccccttcc ttgagcacgc cggactcgcg
     3061 cagcagctcc tccatgcgct cgttgccgct ttcggtgagg ttgaccgtgc gctgcttctc
     3121 gtcgagctcg aagttgtcct tggcgagccg cggaatcagc tggtcgatgg cgatgtaaag
     3181 gtcggagcgg tcgtcgacgg ggcccgagat gatgagcggt gtccgcgcct cgtcgaccag
     3241 gatcgagtcg acctcgtcga cgatcgcgaa gttgtgcccg cgctgcacca tctgcgcgaa
     3301 ctcgtatttc atgttgtcgc gcaggtagtc gaacccgtat tcgttgttgg tgccgtaggt
     3361 gatgtcggcg tcgtaagcgc gcttgcgctc gtcatcgtcg aggccgtgca cgatgacccc
     3421 gacgctcatg ccgaggaagt tgtagatctg ccccatccag tcggcgtcgc ggcgggccag
     3481 gtaatcgttg acggtgacca cgtgcacgcc cttgccggcg agcgcattga ggtagacggg
     3541 cagcgtcgcc accagcgtct tgccctcgcc ggtcttcatc tcggcgatgc cgccctcgtg
     3601 cagcaccatg ccgccgatca gctgcacgtc gaaatggcgc tgcccgaggg tgcgcttcgc
     3661 ggcctctcgc acggtcgcga aagccggcac gagaatgtcg tcgagggact tgccgccggc
     3721 gagttccgcc ttgagcgcat ccgtgcgggc gcgcagagcc tcatcggaca ggacttcgag
     3781 ttcccgctcc atggcgttga tggcgtcgac ccgggggcgg taggccttca cccgccgatc
     3841 attggcggag ccgaaaactt tctttgcgag agcgccgagc atctcaaacc tgtcgtaacg
     3901 agctgaatcg ggagtggaag gggtgcctta tagacttaat catcgccggg cgcatctgaa
     3961 aggcggcggc gggcgcgaag gcgcgatcat gtgaccgttt gcgcacatcg gcccgcttgc
     4021 caataggccg aaatgccgcc acctatcccg gcaccttgcg ggccgaggct cgcggcaaag
     4081 gttttctggc caggagccgt catgtcgatc gtcaaattct ccctgttccg ttcgggtctt
     4141 gtcgccgtcg gcctggcggc cgccggcgcg cccggtttgg ccgtcgcgca gaccggcgcc
     4201 ccgcccgccc aagctggggc cgccgcgccc tccggcagca agatcgtcgc ccgcgtcgac
     4261 ggcacgccca tcaccgaagc ggatctcgcc gtcgcggccg acgatccggc tctgtcgctg
     4321 cccggcgtca ccgacgaaca gaagcgcgac ctgcttgtcg gctatctgat cgatctcaag
     4381 atcggggcga aggccgccga gacggcacgc gtcggggagg gagccgactt cgcccgcaag
     4441 ctcgcctatt tccgcgacaa gctgctgctc ggcgagcacc tc
//
LOCUS       DATAIQ010001005         3385 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_262876, whole genome shotgun sequence.
ACCESSION   DATAIQ010001005 DATAIQ010000000
VERSION     DATAIQ010001005.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3385)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3385)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3385
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_262876"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1389)
                     /locus_tag="VHN20_16475"
     CDS             complement(<1..1389)
                     /locus_tag="VHN20_16475"
                     /inference="COORDINATES: protein motif:HMM:NF012722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase dimerization/phospho-acceptor
                     domain-containing protein"
                     /protein_id="HEX2727419.1"
                     /translation="MKDVMTGMLPLAKRPSLIKAVDKVFDWAWDARSVVRHPAFLATL
                     AALFVAGILLAIFLRMSHVRELDGGRARAVTLSRLLEEQTVRSFQAVDLVLQSMADAV
                     RSFAIPEHDPAFQAMLTHRLKIMPHVRTLFVVGADGFITHDTNHPQTPRVPLADREYF
                     KVHEADPSAGLHIGRPLVSRAVNRWFVSVSRRVDRPDGSFGGIVVAAVEPDFYERFLA
                     ELHVDPNDTISLLHSDATLIARAPAGLDVVGQKFTSLALFSEHLPRSPSGTYTATSRI
                     DGRQRIVSYRTISGLPLVVTVALSREAILAGWTAYTYTSIVAFLLFAILSLAIAFTAC
                     RRRIEASMAQERALTAQKLEMLGQMTGGIAHDFNNLMAVASANLTLAERHIEDPSRFR
                     MHVRALRETIDRGANLTARLLAFARRQSLEVTAEDANELLGALEPILRQAAGARLTLT
                     LRLCPNLPLCLTD"
     gene            complement(1713..2507)
                     /gene="otsB"
                     /locus_tag="VHN20_16480"
     CDS             complement(1713..2507)
                     /gene="otsB"
                     /locus_tag="VHN20_16480"
                     /EC_number="3.1.3.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015952602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004805 - trehalose-phosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0005992 - trehalose biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trehalose-phosphatase"
                     /protein_id="HEX2727420.1"
                     /translation="MNEGTRTLAQNLAGSDDGPWALFLDFDGTLVEIAERPDAVVVHP
                     ELGDALTGLRRSLGGALAIVTGRSINVIDGFIAPHTFDVAGLHGVEYRLSGQLFPCRI
                     EDHPDLRQAIAALEQRFAEQPGVLIEDKGCSVALHWRLAPEAEDEATHVLDEMVAGLG
                     NAYRLQLGKAVGEVLPARASKGRIIEHYLREPPYRGRRAIFAGDDLTDEHAFEAVNRL
                     GGISIRVGAGPTQARYRVPTPAALRQLLGAWASDVGIRLDGLPLVA"
     gene            2630..>3385
                     /locus_tag="VHN20_16485"
     CDS             2630..>3385
                     /locus_tag="VHN20_16485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018045211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HEX2727421.1"
                     /translation="MSNATPATRAIRNGARQLPAVTVDDYNVEMRDDEGFVGDRASNR
                     ASRAILDDWRERLRKVGDDPLGETASEEISKKKLDKLLLEGDPEAAGLVQSAIEDFAQ
                     ELATVVRRFLRLKTWRDTERIIVGGGLRESRVGELAIGRATIILKAGGVDVDLVPIRH
                     HPDEAGLIGAAHLEPAWMFSGHNGLLAVDIGGTNIRAGVVRTNLSKAADLSKAEVWKS
                     ELWRYRDEDPDPSRDEAVARLAEMLEDLIARAGK"
BASE COUNT          586 a         1079 c         1162 g          558 t
ORIGIN      
        1 atccgtgaga cacagcggca ggttcgggca gaggcgcaac gtcagggtaa ggcgggcgcc
       61 ggccgcctgc cgtaggatcg gctctaatgc acccaggagt tcattggcgt cctccgccgt
      121 cacttcgagc gattggcgcc gggcgaaggc gagcaggcgc gccgtcaggt tcgcgccccg
      181 gtcaatcgtt tcgcgcagcg ctctgacatg catccggaat cgggaaggat cctcgatatg
      241 cctctcggcc agggtcaggt tcgcgcttgc cacggccatc aggttgttga agtcgtgggc
      301 gatgcctccg gtcatctggc cgagcatctc gagcttttgc gccgtgaggg cgcgctcctg
      361 cgccatgctg gcttcgatcc ggcgccgaca cgcggtgaat gcgatcgcga gactgaggat
      421 tgcgaaaagc aaaaatgcga caatgcttgt gtaggtgtag gccgtccagc cggccagaat
      481 agcctcgcgg ctcagcgcga ccgtgacgac caggggaagt ccgctgatgg tcctgtagct
      541 gacgatgcgc tgccggccgt cgatccggct ggtcgcggtg taggtgccgc tcgggctgcg
      601 ggggagatgc tccgagaaga gcgccaggga ggtgaacttc tgcccgacca cgtccaggcc
      661 cgcgggcgct ctggcaatca gggttgcgtc gctgtgaagg aggctgatgg tgtcattcgg
      721 atcgacgtgg agttcggcca ggaaccgttc gtaaaagtct ggctcgactg ctgcgaccac
      781 aatcccgccg aaggagccgt cgggacgatc gacccggcgg ctgacactga cgaaccagcg
      841 attgactgcg cgactcacca gcggcctgcc gatgtgcaga cctgccgacg gatcggcctc
      901 gtgcaccttg aaatactcgc ggtcggcgag cgggacgcgc ggcgtctgcg gatgattggt
      961 gtcgtgcgtg atgaagccgt cggcgccgac gacgaacaag gtgcgcacat gcggcatgat
     1021 cttgagacgg tgcgtcagca ttgcctggaa ggctggatca tgctcgggga tggcgaacga
     1081 gcgcacggcg tctgccatgc tctgcaggac gaggtcgacg gcctgaaagc tcctgacggt
     1141 ctgctcctcg aggaggcggc tgagcgtgac cgcccgtgcc cgcccgccat cgagctcgcg
     1201 cacatggctc atgcgcagga agatggcgag gaggatccct gcgacgaaca aggccgcgag
     1261 cgtggcgagg aaggccggat gacggacaac gctcctggcg tcccaggccc aatcgaaaac
     1321 cttgtcgacg gctttgatga gagacggcct tttcgcgagt ggcaacatac ccgtcatgac
     1381 atccttcacg atcaccctcc ttgctcgtcc ttgggatcgg taggtattgc cggcgtgtaa
     1441 gggtctcggg aaaaccagac ttcaggctcg cgtcgtcggt tcgcggacaa tttcgcgatt
     1501 gccgacgacc atggctccag tatcgtggcc tcggacgcca agtaaccacc gcccgacggc
     1561 gctgacttga tctgcgtcaa gagagcagag tcttatcgac gcactgcagg tcgcgagcgg
     1621 ctgtcgacgg ccgtgtcgaa caagacgatc agctgggaag cagcactcgc cggtcgtgga
     1681 gagcagatgg cggtgccggc aaggcccgtg tttcacgcca cgagcggcag gccgtcgagg
     1741 cggatgccga cgtcgctcgc ccaagcgccg agcagctgac gcaaggccgc cggggtcggc
     1801 acgcggtagc gggcctgggt cgggccagcg ccgacccgga tcgagatgcc gccgagcctg
     1861 ttgaccgcct cgaaggcatg ctcgtcggtg aggtcgtcgc cggcgaagat ggcgcggcgc
     1921 ccgcggtaag gcggctcgcg caggtaatgt tcgatgatgc ggcccttgct cgcccgggcc
     1981 ggcagcacct cgccgacggc cttgccgagc tgcaggcgat acgcgttgcc gaggccggcc
     2041 accatctcgt ccaggacgtg ggtcgcttcg tcctcggcct cgggagccag acgccaatgc
     2101 agcgccaccg agcaaccctt gtcctcgatc agaacgccgg gctgttccgc gaagcgttgc
     2161 tccagcgccg cgatggcctg gcgcaggtca ggatgatcct cgatgcggca tgggaacagc
     2221 tggcccgaga gccggtactc gacgccgtgc aagccggcca cgtcgaaggt gtgcggagcg
     2281 atgaagccgt cgatcacgtt gatcgaccgg ccggtcacga tggccagcgc gccgccgagg
     2341 ctgcgccgca ggccggtcag ggcgtcgcca agctcgggat gcacgacgac ggcgtccggg
     2401 cgttcggcga tctccaccag cgtgccgtcg aaatcgagaa acagcgccca cggcccatca
     2461 tcgctgccgg cgagattttg ggcgagtgtg cgcgtcccct cattcatgaa gccgccctcc
     2521 gctcgtcatg gtggccaacg cctcgcttct cataattccg gaacgcgcag cgcgccctgg
     2581 cgttgccgct aaggtcaacc tttgtgtctc ttttcttcgg aacaggtgca tgtccaacgc
     2641 gacgccggcc actcgagcaa tccggaacgg tgcccgccag ctcccggccg tcacggtcga
     2701 cgattataac gtcgagatgc gtgacgacga gggcttcgtc ggcgaccgcg ccagcaaccg
     2761 cgcctctcgt gcgatcctcg acgactggcg cgagcgattg cgcaaggtag gcgacgaccc
     2821 gctgggcgag acggcttcgg aggagatcag caagaagaag ctcgacaagc ttctgctcga
     2881 aggagatccg gaagcggcgg gcctcgtgca gagcgccatc gaggattttg cgcaggagct
     2941 ggctaccgtc gtgcgccgct tcctgcgcct gaaaacctgg cgcgacaccg agcgcatcat
     3001 cgtcggcggc ggtttgcgcg agagccgggt cggcgagctc gccatcggcc gcgccaccat
     3061 catcctcaag gccggcgggg tggacgtcga ccttgttccc atccgacatc atccggacga
     3121 ggctggcctg atcggcgcgg cccacctgga gcctgcctgg atgttctctg gccacaacgg
     3181 ccttctcgcc gtcgacatcg gcggcaccaa catccgcgcc ggcgtggtgc gcaccaatct
     3241 cagcaaggcc gccgacctct cgaaggcgga ggtctggaag tccgagctgt ggcgctatcg
     3301 cgacgaggat ccggatccgt cgcgcgacga ggcggtcgcg cgtctcgccg aaatgctcga
     3361 ggatctgatc gcgcgcgccg ggaag
//
LOCUS       DATAIQ010001006         2306 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_72235, whole genome shotgun sequence.
ACCESSION   DATAIQ010001006 DATAIQ010000000
VERSION     DATAIQ010001006.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2306)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2306)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2306
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_72235"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2066
                     /locus_tag="VHN20_16490"
     CDS             <1..2066
                     /locus_tag="VHN20_16490"
                     /inference="COORDINATES: protein motif:HMM:NF024180.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="CHAT domain-containing protein"
                     /protein_id="HEX2727422.1"
                     /translation="LRPAERAEVLDAQALQLAGIAHRQAGRLQEAARSLDQASAKLRG
                     VRNGNLPSAAWLAADIAVERALVAEAAGNAGSAVSAFDSAIATLEQNYAESPMLLAAR
                     ARKAGFLARRGNAAEARTLFAAVVEQSASVADSGTALRGLLGPYFDMLASEGAAEAAA
                     LMFRAAQALQRPGVAQTQAVLARQFSADEGDAAAMFRLAVTRQRDVARTEAEIAALSA
                     KVTPSPQDLEALAAARSSLEALKSEQTQLQAKLADYPRYKVLAPQATELAELRGALRA
                     GEGYYKMMVVGDRLYAIYATNGTARALRLQPTLPMLADTVTVIRNSIIRTENGEQFVD
                     AFNVDRARRLYLEMFGPVDGELQALKHLVFEPDGPMLQLPPYLLITRQQGIDAYKARL
                     AKPGADPLDMRGIDWLGKGRNVSISVSPRSFLDVRALPASTARQAYLGLGSNAPVPAK
                     PVAAVADECDWPVQTWQNPISPAELMIAQSEFGADKAKLVTGAAFTDTALLGDPRLSD
                     YRILHFATHGLVTAPRPDCPVRPALVTSFGGPGSDGLLSFSEIFDLNLNADVVILSAC
                     DTASAASVGASREAGILTGGNYALDGLVRAFVGAGARSVIASHWPVPDDFDATKRLIT
                     GLIDANPGQPVADALANAQRGLMEDSNTSHPFYWAAFILLGDGAKPMITNRIAASGGS
                     GQASH"
BASE COUNT          350 a          831 c          782 g          343 t
ORIGIN      
        1 ggctgaggcc ggcggagcgg gcagaagtgc tcgatgcgca ggcgctccag ctcgccggga
       61 tcgcgcaccg ccaggcgggc cgtctgcagg aggcggcgcg gagcctcgac caggccagcg
      121 ccaagctgcg cggcgtgcgc aacggcaacc tgccgtcggc ggcgtggctg gcagctgaca
      181 tcgcggtcga gcgggcgctc gtcgccgaag cggcgggcaa cgctgggtct gcggtaagtg
      241 cattcgattc cgcgatcgcg acgctcgagc agaattacgc cgaatcgccg atgttgctag
      301 ccgcgcgggc gcgcaaggcg ggcttcctgg cccgccgcgg caacgccgcc gaagcgcgca
      361 cccttttcgc agcggtggtc gagcaaagcg catcggtggc cgacagcggg accgccctgc
      421 gcggcctgct cggcccctat ttcgacatgc ttgcgagcga gggcgcggcc gaagcggcgg
      481 cgctgatgtt ccgcgccgcg caggcgctcc agcggccggg cgtcgcccag acccaggccg
      541 tgctcgctcg ccagttctcg gccgacgagg gcgacgcggc agcgatgttc cgtctcgccg
      601 ttacccgcca acgcgacgtc gcccggacag aagcagagat cgcggcattg agcgcgaaag
      661 tgactcccag cccgcaggac ctcgaagcgc tcgccgccgc ccgctcgagc ctcgaggccc
      721 tgaagagcga gcagacccag ctccaggcca agctcgccga ctatccgcga tacaaggtgc
      781 ttgccccgca ggcgaccgag ctcgccgaac tgcgcggcgc gctgcgcgcg ggcgagggct
      841 attacaagat gatggtcgta ggcgaccggc tttacgccat ctacgcgacc aacggcacgg
      901 cccgggcgct gcggctccag ccgaccctgc cgatgcttgc cgatacggtg accgtcatcc
      961 ggaacagcat catccgcacg gagaacggcg agcagttcgt cgacgcgttc aatgtcgacc
     1021 gcgcgcggcg cctttatctg gagatgttcg gaccggtcga cggcgagctc caggcgctca
     1081 agcatctggt cttcgagccc gatggaccga tgcttcagtt gccgccctat ctgctgatca
     1141 cccgccagca gggcatcgac gcctacaagg cgcggctcgc caagcccggg gccgacccgc
     1201 tcgacatgcg cggcatcgac tggctcggca agggccgcaa cgtctcgatt tcggtcagcc
     1261 cgcgcagctt cctcgatgtt cgcgcactgc ccgcctcgac cgcacgccag gcctatctcg
     1321 ggctcggcag caatgcaccg gtaccggcca agccggtcgc ggctgtcgcc gacgagtgcg
     1381 attggccggt gcagacatgg cagaacccga tttcgccggc cgagctgatg atcgcgcagt
     1441 ccgagttcgg cgccgacaag gccaagctgg tgaccggcgc tgccttcacc gacaccgcgt
     1501 tgctcggcga cccgcgcctc agcgactacc gaatcctcca tttcgccacc cacgggctgg
     1561 tgaccgcacc gcgcccggac tgcccggtgc gcccggcgct ggtcacctcg ttcggcggcc
     1621 cgggctccga cgggctgctg agcttcagcg agattttcga cctcaacctc aatgccgacg
     1681 tcgtcatcct gtcggcctgc gataccgcca gcgcggcgag cgtcggcgca tcgcgcgagg
     1741 ccggcatcct gaccggcggc aattatgcgc tcgacggact ggttcgcgcc ttcgtcggcg
     1801 ccggcgcccg ctcggtcatt gccagccact ggccggtgcc cgacgatttc gacgcgacca
     1861 agcggctgat caccgggctg atcgacgcca accccggcca gccggtcgcc gacgcgctcg
     1921 ccaacgcgca gcgcggactg atggaggatt ccaatacgtc gcacccgttc tactgggcag
     1981 cgttcatcct cctcggggac ggcgccaagc cgatgatcac caatcgcatc gccgcgagcg
     2041 gggggtcggg ccaggcgagc cactgagatt tgcgcgctgg cgtggcggag tgaggtctgc
     2101 caccgtcgcg ccgtgacgag tcggctagcg ttttccctcc tggtggcgtt tgcgctggcc
     2161 cagccggcgc cggcccgtgt ttcgccggag caggcgcgga tcgcagcgca tgtgtcgaac
     2221 agcgtcataa tccgcgaccg gctcgggatc gcccatgtcc gcggcgcgcg cgaccccgat
     2281 gccgtgttcg cgatggtcta tgcgca
//
LOCUS       DATAIQ010001007         2189 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_263142, whole genome shotgun sequence.
ACCESSION   DATAIQ010001007 DATAIQ010000000
VERSION     DATAIQ010001007.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2189)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2189)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2189
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_263142"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..491)
                     /locus_tag="VHN20_16495"
     CDS             complement(<1..491)
                     /locus_tag="VHN20_16495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727423.1"
                     /translation="MISRRHTIFGSLACAAGATSPGFASPGWAAEPANLEAARREGSV
                     VWYTTLIVNQAILPLKAAFERKYPGVTLQYVRNDEAPTAIRLLNEARAGRVQADIFDG
                     LSIMEPLRREGLVAPYTSPDAAQFPPEMRDKDGYWHAILLYVFAPGVNTTLVSPAQAP
                     KSY"
     gene            complement(524..>2189)
                     /locus_tag="VHN20_16500"
     CDS             complement(524..>2189)
                     /locus_tag="VHN20_16500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018063376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HEX2727424.1"
                     /translation="VPFAIVIFAILVLPPLLFLAKGAVTVTEGGVTRWTLERFSTLLL
                     QRGILTSAWNSFVFAAGSAVLALLIGGVTAWLVERTNAPLKSLTYLSTMIALGTPYVL
                     YTTAWLLLLARSGPVNTWYRQLTGDTGLLINVYGMGGMILIEGLLWSPLVFLLLGATL
                     RNFNPELEEAARMSGAGTWATIRRITLRLSLPAVLALAMLVFIRSVEAFEVPALVGLP
                     GRVHVLTTDIYELMHRTMPPDIGAASALSVLLLVIVCVLLFYYSRMTRNAEKFATVTG
                     KNFRPNQIDLGRLRPVAGGVLFLNFVLLLVLPTVILVWASLLPFYQTIRASAFALLTL
                     DNYANVLSSARYLTLLGNTLIVAVVTATIVMLLTSVSAWLSVRRVPGARILDQLGTTP
                     LVFPGIVLGVGVMQFFLNVPIGIYGTIWIIVWAFIINYLPYGTRYSYAGMLQLHRELE
                     EAAAVAGASTFTTFRRIVLPLLAPSLIAGWLFIFLLATRVLALPVLLSGPSSQTMAVA
                     MFDLWGNGQGPELAALGLLWSLAMTVVALGFYTVARRSGIGLYGQG"
BASE COUNT          427 a          687 c          774 g          301 t
ORIGIN      
        1 tgatacgatt tcggggcttg tgccggggaa acgagcgtcg tgttcacgcc cggcgcgaag
       61 acgtaaagca ggatcgcatg ccagtagccg tccttgtcgc gcatctcggg cgggaactgc
      121 gccgcgtccg gcgacgtgta gggagcaacg agaccctcgc ggcgcagcgg ctccatgatg
      181 ctgaggccat cgaaaatgtc ggcctgcacg cgcccggccc gggcctcgtt caataatctg
      241 atcgcggtag gggcttcgtc gttgcgcacg tattgaagcg tcaccccggg atatttccgc
      301 tcgaacgcgg ccttgagcgg caggatcgcc tggttgacga tcagcgtcgt gtaccagacc
      361 acgctgccct cgcggcgggc cgcctcgagg ttcgccggct cggccgccca tcccggcgat
      421 gcgaagccgg gcgacgtggc gcccgccgcg caggccaaag acccgaaaat cgtgtgccgg
      481 cgcgagatca tggcttttcc ccctggactg gcccgaccgt tgctcatccc tggccataga
      541 ggccgatgcc ggagcggcgc gccacggtgt agaagccgag cgccaccacg gtcatggcga
      601 ggctccacaa cagcccgagg gcagcgagct ccggcccctg cccgttgccc cacaggtcga
      661 acatggccac cgccatggtc tgcgagctcg ggccggacaa gagcacgggc agcgcgagga
      721 cgcgcgtcgc cagcaggaag atgaagagcc agccggcgat cagcgacggc gcgagcaggg
      781 gcaggacgat gcggcggaag gtcgtgaatg tcgaggcccc ggcaaccgcc gccgcctctt
      841 cgagctcgcg gtggagctgc aacatgcccg catagctgta gcgggtgccg tacggcaggt
      901 agttgatgat gaacgcccag acgatgatcc agatggtccc gtagatgccg atcggcacgt
      961 tgaggaagaa ttgcatgacg ccgacgccga gcacgatgcc ggggaacacg agcggcgtcg
     1021 tgccgagctg gtcgaggatc ctggctccgg gcacccggcg caccgacaac caagcgctca
     1081 ccgacgtgag caacatgacg atggtcgcgg tgaccacggc gacgatcaag gtgttgccga
     1141 gcagggtcag atagcgggcg gacgacagca cgttcgcgta attgtcgagg gtcagcagcg
     1201 cgaaggcaga ggcgcggatc gtctggtaga acggcaacag ggacgcccat accaggatca
     1261 ccgtgggcag cacgagcagc agaacgaagt tcaggaaaag cacgccgccc gccaccggcc
     1321 tcaagcggcc gaggtcgatc tgattgggcc ggaaattctt gcccgtgacg gtggcgaatt
     1381 tctccgcgtt ccgcgtcatg cggctgtagt agaagagcag cacgcagacg atcaccaaga
     1441 gcaggaccga aagcgcgctc gccgcaccga tgtcgggcgg catggtccgg tgcatcagct
     1501 catagatgtc ggtggtgagc acgtggacgc gcccgggaag gccgacgagg gcgggcacct
     1561 cgaaggcttc caccgagcgg atgaagacga gcatcgccag cgcgagcacg gccgggagcg
     1621 acaggcggag cgtgatgcgc cggatggtcg cccaggtccc ggcgccgctc atgcgcgcag
     1681 cttcctcgag ttccggattg aaattgcgca aggtcgcgcc gagcagcagg aacacgagcg
     1741 gcgaccacag cagcccctcg atcaggatca taccgcccat cccgtagacg ttgatgagga
     1801 gcccggtgtc gccggtgagc tgccgatacc aggtgtttac cgggccggag cgcgcgagca
     1861 gcagaagcca cgccgtcgtg tagagcacgt acggcgtgcc gagggcgatc atcgtgctga
     1921 gataggtcag cgatttcagc ggcgcgttgg tgcgctcgac gagccacgcc gtgaccccgc
     1981 cgatgaggag cgcgaggacg gcgctgccgg cggcgaatac gaacgagttc caggcgctcg
     2041 tcaggatgcc gcgctggagc agcagcgtcg agaagcgctc caaggtccag cgggtgacgc
     2101 cgccctcggt caccgtgacg gctcccttgg ccaggaagag cagcggcggc agcaccagga
     2161 tcgcgaagat cacgatggcg aacgggacg
//
LOCUS       DATAIQ010001008         9947 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_263186, whole genome shotgun sequence.
ACCESSION   DATAIQ010001008 DATAIQ010000000
VERSION     DATAIQ010001008.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 9947)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9947)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9947
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_263186"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(34..1203)
                     /locus_tag="VHN20_16505"
     CDS             complement(34..1203)
                     /locus_tag="VHN20_16505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HEX2727425.1"
                     /translation="MGTSRTGAAGAASRIQVSRTGQAASSPRTGRTSPFRVDQILNGD
                     CIAALERLPAESVDLVFADPPYNLQLESALTRPDQSLVDAVDDDWDKFASFADYDAFT
                     RAWLLGCRRVMKKNATLWVIGSYHNIFRVGATLQDLGFWILNDVVWRKANPMPNFRGR
                     RFTNAHETLIWATKGADAKNYTFHYDALKAANEDLQMRSDWYIPLCTGEERLKDAHGR
                     KTHPTQKPEALLARALLSATNPGDVVLDPFFGTGTTGAVAKKLGRHFIGIERDPTYAA
                     AAKARIAAVQPLEDVAVAAAPAKRSEPRVPFLSVIEGGHLKPGETLVDEKRRHKAVVR
                     ADGTLALGPAIGSIHKIGALAQGLPACNGWTFWHAERKGGLVVIDDFRAQVRASL"
     gene            complement(1375..1986)
                     /locus_tag="VHN20_16510"
     CDS             complement(1375..1986)
                     /locus_tag="VHN20_16510"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012383927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HEX2727426.1"
                     /translation="MARPRLTTRYERKLTRCGHGIIAGIDEAGRAPLAGPVAAAAVIL
                     DLDHVPKGLADSKVLSLEEREELFKAILATSKVGIATISHAEIDTINIRQASLRAMCK
                     ALAALPCVPDLALVDGNDPPKLPCPVETIVKGDGKIPSIAAASIVAKVVRDRMMKRLA
                     MRFPAYGFATNVGYGTAVHYAALASHGPCPFHRTSFAPLRGEA"
     gene            complement(2153..3337)
                     /locus_tag="VHN20_16515"
     CDS             complement(2153..3337)
                     /locus_tag="VHN20_16515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020176648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PA0069 family radical SAM protein"
                     /protein_id="HEX2727427.1"
                     /translation="MTVRAKEIARDEVRTSRVAPGPQSAEAVRRRIEAAPGATVPAER
                     RNGRGATLNPDGRYEPQQRESFYDGWDMVDEPPPLKTEVTIEKPRTIIAKNDSPDISF
                     DRSINPYRGCEHGCVYCFARPTHAYQGLSPGLDFETKLFAKPNGPELLEKELARPGYK
                     PAVMAMGTNTDPYQPIERKFRITRGILEVLSRTSHPVGIVTKSALITRDIDILGPMAD
                     RGLAKAAVSITTLDPKLARKMEPRAATPKKRLDTIRQLSEAGIPVAVMVAPIIPAITD
                     HEIEEILRAAYAAGARSAGYVLLRMPHEIKDLMHGWLQEHYPDKLKHVFSLVQDSRGG
                     KVYDSSWGTRMTGVGPYAWMIGRRFEAAAARIGFNKQRRPLRTDLFTPPQPHAAQQLT
                     LL"
     gene            3441..3950
                     /locus_tag="VHN20_16520"
     CDS             3441..3950
                     /locus_tag="VHN20_16520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727428.1"
                     /translation="MISALILAERGGEALGLTLASLVPAVVAGLVGDAVLIAPRQDPS
                     VEAIADGVGASLVTLAPRSDPWRAGAAAARRDWLLCLEDGDVLAEGWIRPLERFLTAA
                     AAADRGIGRLRRPSAGPAAMRDVVEHWAGTRKPRAGDLVHRVWLDGARRRVRPVPIRA
                     RIERDPDLR"
     gene            complement(4311..4865)
                     /gene="moaB"
                     /locus_tag="VHN20_16525"
     CDS             complement(4311..4865)
                     /gene="moaB"
                     /locus_tag="VHN20_16525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein B"
                     /protein_id="HEX2727429.1"
                     /translation="MAGIDPSLSFVPLSVAVLTVSDTRSLAEDRSGDVLVERLTKAGH
                     RLGDRAVVTDDVDAIRAKVQAWIADKGVDVVITTGGTGFTGRDVTPEAIEPLFEKRMD
                     GFSAVFHRISYDKIGTSTVQSRAVGGVAGGTYIFVLPGSPGACKDAWDGILESQLDYR
                     HRPCNFVEIMPRLDEHLKRGKARG"
     gene            complement(5016..5915)
                     /locus_tag="VHN20_16530"
     CDS             complement(5016..5915)
                     /locus_tag="VHN20_16530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018261265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="neutral zinc metallopeptidase"
                     /protein_id="HEX2727430.1"
                     /translation="MRWEDFRPSEYLEDRRGDGGGGGGGIPMGRGGLGIGTMIILGIV
                     GWALGIDPRILISGVEMMQGGGSPQYEQPSQAQRRQQGPPQDQMGRFAAAVLGNTEDV
                     WKDIFPKQVNKQYTPPRMVLFSGATRSRCGAAQSAMGPFYCPLDQTVYIDLSFFQEMQ
                     RRFRAGGDFAYAYVIAHEVGHHVENQLGLLARVQQRQQEVGRTEANQLSVRVELMADC
                     LAGIWASQADQRFKAVEPGDVEEAMKAAEAIGDDRLQQQSQGRVVPDSFTHGSSEQRM
                     RWFMTGFKSGQVQACDTFRASRV"
     gene            complement(6151..7026)
                     /locus_tag="VHN20_16535"
     CDS             complement(6151..7026)
                     /locus_tag="VHN20_16535"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004844 - uracil DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HEX2727431.1"
                     /translation="MPDLAPDRAALLALLEFHVAAGVDCALDETPHDRFADDAARPAA
                     QAFAEATVARGAAAGTSDAAQRTQPHPLLQRAPEPRMPARPAVVAPEEAATAARDQAR
                     TARSLEELEALLASFEGCGLRVTAKNLVFADGNPQSRLMFVGEAPGGDEDRIGKPFVG
                     RSGQLLDRMLAAVGLDRTSVYIANIVPWRPPGNRTPTPQEVAICRPFIEKQIELADPD
                     ILVCLGGPSAQTLLNIKDGILKTRGRWFPFHTGRREIRAFATLHPAYLLRQPLQKRLA
                     WRDFRALKRALEGSM"
     gene            7208..8881
                     /locus_tag="VHN20_16540"
     CDS             7208..8881
                     /locus_tag="VHN20_16540"
                     /EC_number="1.5.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015952402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004174 -
                     electron-transferring-flavoprotein dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein-ubiquinone
                     oxidoreductase"
                     /protein_id="HEX2727432.1"
                     /translation="MDLPARESMEFDVVIVGAGPAGLATAIRIKQLAAGRGADISVVV
                     VEKGSEVGAHILSGAVIDPVGLDRLLPGWRDDPERPLRTEVTRDEFLYLTPSGGLALP
                     NLFMPKLMDNHGNFVGSLGNVCRYLGRKAEELGVEIYPGFAASEVLVEDGKVVGVATG
                     DLGIGKDGELKASFARGMELRGKYTVFGEGARGHLTKQLINRFSLNARSDHQKYGIGL
                     KELWQVQPDRHRPGLVQHSFGWPLSNRTGGGSFLYHFEDNLVAVGFVVHLNYENPTLS
                     PFDEFQRFKTHPRIRTVLEGGKRLSYGARAIMEGGWQSVPKLAFPGGCLVGDSAGFVN
                     VPRIKGTHNAILSGVLCAEHLVEALAAGRAGDEVSSYEEAWRSSPVGEDLYRVRNVKP
                     LWSRFGTFAGVALGGLDMWMNQLFRTSPFGTLAHGKPDHACLKPLDQVTPITYPKPDG
                     VLTFDRLSSVFLSNTNHEEDQPSHLVLADPSVPIRRNLPLYGEPARLYCPAGVYEVVY
                     GDVEKRTDPRFVVNAQNCVHCKTCDIKDPAQNITWVTPEGGGGPNYPNM"
     gene            9050..>9947
                     /locus_tag="VHN20_16545"
     CDS             9050..>9947
                     /locus_tag="VHN20_16545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018042384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727433.1"
                     /translation="MPFVKTPSVIPGLIGLTLAAGVCLVTTPVLARRAPSSPLPHSAF
                     QPAESLEGNYLAAYIANSARDTAAAAAFYREALRADPNNAELLERAFVSFLADGTMQE
                     AFRTAERLLQRDQSNGLAHLALGVRDLKARQFTAARNHLNRGGRGRLVDLTATLLTSW
                     SLAGAGEGKKALETTDKLKGERAYNVFRDYHAGLIASLTGNTAEAERRLKAAYEADKA
                     TLRVVDAYGRFESRRGRKDAALAAYSGFDALLPRHPLVRDAMEQLQAGKTLAPLVGSV
                     AEGAAEVLYGLGAAGNQTGDELP"
BASE COUNT         1548 a         3346 c         3465 g         1588 t
ORIGIN      
        1 ggcgcgcccc tcctccaggc aggccttgcg accttagagc gaggcgcgta cctgcgcgcg
       61 gaagtcgtcg atgacgacga ggccgccttt gcgctcggcg tgccagaacg tccagccgtt
      121 gcaggccggc aggccctggg cgagggcgcc gatcttgtgg atcgagccga tggccggccc
      181 gagcgcgagc gtgccgtcag cgcggacgac cgccttgtga cggcgcttct cgtcgaccag
      241 cgtctcgccg ggcttgaggt ggccgccctc gatcaccgac aggaagggca cgcgcggctc
      301 gctgcgcttg gcgggcgccg cggccacggc cacgtcctcg agcggctgga cggcagcgat
      361 tcgcgccttg gcggcggccg cataggtcgg gtcgcgctcg atgccgatga agtgccggcc
      421 cagcttcttg gcgacggcgc cggtcgtgcc ggtgccgaag aaggggtcga gcaccacgtc
      481 gcccggattg gtggcggaga gcagcgcccg cgccagcagc gcttcgggct tttgcgtcgg
      541 atgcgtcttg cggccgtgcg cgtccttcag ccgttcctcg cccgtgcaga gcgggatgta
      601 ccagtccgac cgcatctgca ggtcttcgtt ggcggctttg agcgcgtcat aatggaaggt
      661 gtaattcttg gcgtcggcgc ccttggtcgc ccagatcagc gtctcgtggg cgttggtgaa
      721 gcggcggccg cgaaaattcg gcatcggatt ggccttgcgc cacacgacgt cgttgaggat
      781 ccagaagccg aggtcctgga gcgtcgcgcc gacccggaag atgttgtgat acgagccgat
      841 cacccacagg gtcgcgttct tcttcatgac gcgccggcag ccgagcagcc aggcgcgcgt
      901 gaaggcgtcg taatcggcga agctggcgaa cttgtcccag tcgtcgtcga cagcgtcgac
      961 gaggctctgg tcgggccgcg tcagcgcgct ttcgagctgc agattgtagg gcggatcggc
     1021 gaagacgagg tccacgctct cggccggcag gcgttcgagc gcggcgatgc aatcgccgtt
     1081 cagaatctga tcaacccgaa agggcgacgt gcgccctgtc cggggcgacg acgcagcctg
     1141 cccggtacgc gagacctgga tccgggaggc ggcgccggcg gccccggtac gcgaggtacc
     1201 catggcaaac accggttacg cgactgacac tccggatcat gacggggcag ggtaaaaacc
     1261 gcgttgagcg ggacggcagg caggtgggca aattcgtccc gttttggggc tgcaaatttt
     1321 gcctagccgt tgaaatgatt gaagttactg gcctttatgc cggcctgggc agattcaggc
     1381 ctcgccgcgc aacggtgcga aactggtgcg gtggaacggg cacggcccgt ggctcgcgag
     1441 cgcggcgtaa tgaacggccg tgccgtagcc gacattggtg gcaaatccgt aggccggaaa
     1501 acgcatggcg aggcgcttca tcatgcgatc gcgcaccacc ttggcgacga tcgacgcggc
     1561 cgcgatcgac gggatcttgc cgtcgccctt gacgatggtc tcgaccgggc agggaagctt
     1621 cgggggatcg ttgccgtcga ccagcgccag gtcgggcacg caggggaggg cggcaagcgc
     1681 cttgcacatg gcgcgcaacg aggcctggcg gatgttgatg gtgtcgatct cggcatgcga
     1741 gatcgtggcg atgccgacct tgctcgtggc gagaatcgcc ttgaacagct cctcacgctc
     1801 ctcgagcgac agcaccttcg aatcggcgag gcccttcggc acgtggtcga ggtcgaggat
     1861 cacggctgcc gccgcgacgg gacccgcgag cggggcgcgc cccgcttcgt cgatcccggc
     1921 aatgatgccg tggccgcagc gggtgagctt gcgctcgtat cgggtcgtga gcctgggtcg
     1981 cgccatgcgt cgccggaggg agccatgtta gtgattcgtt aagacgccac gaaacgatgc
     2041 cgcaccggct ttgtcactcc gccaatagcg cgcagctccg gcgagcctgt ggaacacggg
     2101 ggataagttc ccgttccccc ggatcaagtc cgggtggctg cacccgtccg gattagagca
     2161 gcgtcagctg ctgggcggcg tgaggctgcg gcggggtgaa caggtcggtc cgcagcggcc
     2221 ggcgctgctt gttgaagccg atgcgggcgg cggcggcctc gaagcggcgg ccgatcatcc
     2281 aggcataagg gccgacgccg gtcatgcgcg tgccccagga cgaatcatag actttgccgc
     2341 cgcgcgagtc ctgcaccagc gagaacacgt gcttcagctt gtcgggatag tgctcctgaa
     2401 gccagccatg catcaggtcc ttgatctcgt gcggcatgcg cagcagcacg tagccggccg
     2461 agcgcgcgcc ggccgcatag gcggcgcgca ggatctcctc gatctcgtgg tcggtgatcg
     2521 ccggaatgat cggcgccacc atcacggcga ccggaatgcc ggcttccgac agctgacgga
     2581 tcgtatcgag gcgcttcttc ggcgtcgccg cgcgcggctc catcttgcgc gccagcttgg
     2641 ggtcgagcgt cgtgatcgag accgccgcct tggcgaggcc gcggtcggcc atgggcccca
     2701 ggatgtcgat gtcgcgcgtg atcagcgccg acttggtcac gatcccgacc ggatggctgg
     2761 tccggctcag cacctccagg atgccgcgcg tgatgcggaa cttccgctcg atcggctgat
     2821 acgggtcggt gttcgtgccc atagccatca ccgccggctt gtagccgggc ctggccagct
     2881 ccttctcgag gagctcgggc ccgttgggct tggcgaacag cttggtctcg aaatcgagcc
     2941 ccggcgacag cccctgatag gcgtgcgtcg gccgcgcgaa gcagtagacg cagccgtgct
     3001 cgcagccgcg ataagggttg atcgagcggt cgaacgagat gtccggcgaa tcgttcttcg
     3061 cgatgatggt gcgcggcttc tcgatcgtga cctcggtctt gagcggaggc ggctcgtcga
     3121 ccatgtccca gccgtcgtag aacgactcgc gctgctgggg ctcgtagcgg ccgtcgggat
     3181 tgagcgtcgc gccgcgcccg ttgcggcgct cggcggggac ggtcgctccc ggagccgcct
     3241 cgatgcgccg gcggaccgct tcggcgctct gcgggcctgg cgcaacccgc gacgtgcgca
     3301 cctcgtctcg cgcgatctct ttggctctta ccgtcatggt tcgcaaatca tccgtggaac
     3361 gtcgcctcac tataagaaca aaatgagaac atgcaagttc cgagtaggac aaaaatcacg
     3421 cgctgcgcta acatgccacc atgatcagcg cgctcatcct ggcggagcgc ggcggcgagg
     3481 cgctcggcct caccctcgca tcgctcgtgc ccgccgtcgt cgccggcctc gtcggcgacg
     3541 cggtgctcat cgcgccgcgg caggatccct cggtagaggc gatcgccgac ggcgtcgggg
     3601 cgagcctcgt tacgctggcg ccacggtccg atccgtggcg cgcaggcgcc gctgcggcgc
     3661 gccgcgactg gctgctatgc ctcgaggacg gagacgtgct cgccgagggc tggatcaggc
     3721 cgctcgagcg ttttttgacg gcggctgcgg cggccgatcg cggcatcggc cgcctcagac
     3781 ggccctcagc tggaccggca gcgatgcggg acgtggtcga gcactgggcc ggaacgcgca
     3841 agccgcgcgc cggcgacctc gtgcatcgcg tctggctcga cggcgcgcgc cggcgcgtgc
     3901 ggccggtgcc gatccgggcc cgcatcgagc gcgacccgga tcttcgctga agcgacaacc
     3961 cggactcgcg tccggatcag gggcctcgcg gcgcttccgc ggatgcactc tcctggctgc
     4021 gcggctgctc cgcgcggcgc aaattcaccc acgccagaac ccaagccaga acgagggccg
     4081 aatacgaggc aagcagcgca taggccgcgt gtctcgggaa ggtgcatgcc gcagctgtct
     4141 cagggggcac ccttgtgccg agcatgtaaa cgccgcatgc gaattcgcca gcccataccg
     4201 cgaaaagcga gccgacgaag ctgaggatcg aacccacgcg gagcatccag cttacccggc
     4261 gcaggcggcg gggcttcatg ctgctgctcg ggctgacggg cacgagcccc tcagccacgc
     4321 gccttgccgc gcttcagatg ctcgtcgaga cgcggcatga tctcgacgaa gttgcagggc
     4381 cggtgacgat agtcgagctg gctttccaaa atgccatccc acgcgtcctt gcaggcgccc
     4441 ggcgagcccg gcagcacgaa gatgtaggtg ccgccggcaa cgccgcccac ggcgcgcgac
     4501 tggaccgtcg aggtgccgat cttgtcgtag gagatgcggt ggaacacggc ggagaagccg
     4561 tccatccgct tctcgaacag cggctcgatc gcttccggcg tgacgtcgcg gccggtgaag
     4621 ccggtgccgc ccgtggtgat cacgacgtcg acgcccttgt cggcgatcca tgcctgcacc
     4681 ttggcgcgga tggcgtcgac gtcgtcggtg acgacggcac gatcaccgag cctgtgcccg
     4741 gccttcgtca ggcgctcgac gagcacgtcg ccggaacggt cctcggccag cgagcgcgtg
     4801 tccgagacgg tgagcaccgc gaccgacagc ggcacgaagg aaagcgaagg atcgatgcct
     4861 gccattcagg agttctccgg gcgagagccg agagcacctt gtaattgtca ttccggcgcg
     4921 gcgcgatagc ccaaaacccg tttcccggac ggggtggagc gagccccgca attatgcggg
     4981 gaatggaacc cgatccggga aagggcgggg cgcaatcaca cgcggctggc gcggaaggtg
     5041 tcgcaggcct gcacctggcc gctcttgaag ccggtcatga accagcgcat gcgctgctcc
     5101 gacgagccgt gcgtgaagga atccggaacc acgcggccct ggctctgctg ctgcaggcgg
     5161 tcgtcgccaa tcgcctccgc cgctttcatg gcctcctcga cgtcgccggg ctcgaccgcc
     5221 ttgaagcgct ggtcggcctg actggcccag atgccggcga ggcaatcggc catcaattcg
     5281 acgcgcacgg acagctggtt ggcctcggtg cggccgactt cctgctggcg ctgctgaacg
     5341 cgcgccagga ggccaagctg gttctcgaca tgatggccga cctcgtgggc gatcacgtag
     5401 gcgtaggcga agtcgccgcc ggcccggaac cgccgctgca tctcctggaa gaacgacagg
     5461 tcgatgtaaa cggtctggtc gagcgggcag tagaacggcc ccatggccga ctgggcggcg
     5521 ccacagcgcg agcgcgtcgc cccggagaac agcaccatgc gcggcggcgt gtactgcttg
     5581 ttgacctgtt tcggaaagat gtccttccag acatcctcgg tgttgccgag caccgcggcg
     5641 gcgaagcggc ccatctggtc ctgcggcggg ccctgctggc ggcgctgggc ctggctcggc
     5701 tgctcatatt gcgggctgcc gccgccctgc atcatctcga cgccgctgat caggatgcgc
     5761 ggatcgatgc cgagcgccca gccgacgatg ccgaggatga tcatggtgcc gatgccgagg
     5821 ccgccacggc ccatgggaat gccgccgccg ccgccgccgc cgtcgccacg ccggtcctca
     5881 agatactcgg acggtctgaa atcttcccac cgcatgatca gtccttaacg tatcgcccgg
     5941 ccgagccgcg cggcccttat acaagcggca gggccgcgca cggttccggt gccgccggcg
     6001 tcgaccgcgt tggcgcctgc gaacccggcg atgctgcgcc tgtcgcaccg ctcgcaagct
     6061 cgacattatg acatcgacgg aggaccgcca gcgtggagca tggcggaacg gctccccggc
     6121 ggcggtgcgg gcaagcaccc ggcgtcgccg tcacatactg ccttcgagcg cgcgcttcag
     6181 ggcgcggaaa tcgcgccatg cgagccgctt ctggagcggc tgccgcaaga gataggccgg
     6241 gtgcagggtg gcgaaggcgc ggatctcgcg ccggcccgtg tggaagggga accagcggcc
     6301 gcgggtcttg aggatgccgt ccttgatgtt gagcagcgtc tgcgccgagg gaccgccgag
     6361 acagacgagg atgtcgggat cggcgagctc gatctgcttc tcgatgaacg ggcggcagat
     6421 cgccacctcc tgcggcgtcg gcgtgcgatt gcccggcggc cgccagggca cgatgttggc
     6481 gatgtagacg ctcgtgcggt cgagcccgac ggcggcgagc atgcggtcga ggagctgccc
     6541 cgagcgcccg acgaagggct tgccgatgcg gtcctcgtcg cctccgggcg cctcgccgac
     6601 aaacatcagc cggctctgcg gattgccgtc cgcgaagacg agattctttg ccgtcacgcg
     6661 cagcccgcag ccctcgaacg aggcgagcag cgcctcgagc tcttcgaggc tgcgcgccgt
     6721 ccgtgcctgg tcgcgcgccg ccgtcgccgc ctcctccggc gcaacgaccg ccgggcgggc
     6781 gggcatgcgc ggctcggggg cccgctgcag cagcggatgc ggctgcgttc gctgagcggc
     6841 gtccgaggtg cccgcggcgg cgccgcgcgc gacggtcgcc tcggcaaacg cttgggccgc
     6901 gggccttgcg gcgtcatcgg caaagcggtc gtgcggggtc tcgtcgagcg cgcagtcgac
     6961 gcccgccgcg acgtggaatt cgagcagcgc aagcagtgcg gcgcgatcag gcgcgaggtc
     7021 cggcatgcgc cgcatctaac gcgcgccacg ccggagataa agtcgtagcg tggcgcgccc
     7081 ctctctctga tcgctgcttc gcgcgaaggg ttcctcgccg cgcggcgagc gaggcccgac
     7141 ttgctggccg tagcaagatc gttcatgtgt gaacgatctc gtcatggcca atcgctggag
     7201 gcgcgtcatg gatttgccgg cacgcgaatc gatggagttc gacgtggtga tcgtcggcgc
     7261 cggtccggcg ggtctggcaa cggccatccg catcaagcag cttgcggcgg ggcgcggcgc
     7321 cgacatctcg gtcgtggtcg tcgagaaggg gtccgaggtc ggcgcccaca tcctgtccgg
     7381 cgccgtgatc gatccggtcg ggctcgatcg tctgctgccg ggatggcgcg acgatccgga
     7441 gcggccgctg cgcacggagg tgacgcgcga cgagttcctc tacctgaccc cgtcgggcgg
     7501 cctcgccctg ccgaacctgt tcatgccgaa gctcatggac aaccacggca atttcgtcgg
     7561 ttcgctcggc aacgtctgcc gctatctggg acgcaaggcg gaagagctcg gcgtcgagat
     7621 ctatcccggc ttcgccgcgt cagaggtcct cgtcgaggat ggcaaggtgg tcggtgtcgc
     7681 gacgggcgac ctcggcatcg gcaaggacgg cgagcttaag gccagtttcg cgcgcggcat
     7741 ggagctgcgc ggcaaataca cggtgttcgg cgaaggcgcg cgcggtcatc tcaccaagca
     7801 gctgatcaac cgcttttcgc tcaatgcccg cagcgatcac cagaaatacg gcatcggcct
     7861 caaggagctg tggcaggtcc agcccgaccg tcaccgtccc ggcctcgtgc agcactcgtt
     7921 cggctggccg ctcagcaacc gcaccggcgg gggctcgttc ctgtaccact tcgaggacaa
     7981 cctcgtcgcc gtcgggttcg tcgtccacct caattacgaa aacccgacgc tatcgccgtt
     8041 cgacgaattc cagcgcttca agacgcatcc gcgcatccgc accgtgctcg agggtggcaa
     8101 gcggctctcc tacggcgcgc gcgccatcat ggaaggcggc tggcagtcgg tgccgaagct
     8161 cgccttcccg ggcggctgcc tggtcggcga ctcggccggt ttcgtgaacg tcccgcgcat
     8221 caagggcacg cataacgcca tcctgtcggg cgtgctgtgc gccgagcatc tggtcgaggc
     8281 gctggccgcc ggcagggcag gggacgaggt ctcgtcctac gaggaggcct ggcgctcgtc
     8341 gccggtcggc gaggatcttt atcgcgtgcg caacgtcaag ccgctgtggt cgcgcttcgg
     8401 cacgttcgcg ggggtcgccc tcggcggcct cgacatgtgg atgaaccagc tgttcaggac
     8461 gtcgccgttc ggaacgctcg cccacggcaa gcccgatcat gcatgcctca agccgctcga
     8521 tcaggtgacg ccgatcacct atccgaagcc cgacggggtc ctcaccttcg acaggctgtc
     8581 ctcggtgttc ctgtcgaaca ccaaccacga ggaggaccag ccgagccacc tggtcctggc
     8641 cgacccctcg gtcccgatcc ggcgcaacct gccgctctac ggggaaccgg cgcgcctcta
     8701 ttgcccggcc ggggtctacg aggtcgtcta tggcgacgtg gagaagcgca ccgacccgcg
     8761 tttcgtcgtc aacgcgcaga actgcgtgca ttgcaagacc tgcgacatca aggacccggc
     8821 ccagaacatc acctgggtga cgcccgaggg cggcgggggg ccgaactatc ccaacatgtg
     8881 agtgcggccg ccgttgacgg gggcggccga tgcagtcatg agcggttccc ggatgaaccg
     8941 cggcggatag gctggacctt gccgcgccag attgaagcag ccatggtggc gcgcctcttg
     9001 gccgcgtctt tgcttgtata atcacccgcg attcattgga gcgagcttcg tgcccttcgt
     9061 caaaacgcct tcggtgatcc ctggtctgat cgggctcacg ctcgcggcgg gcgtctgcct
     9121 cgtcacgacc cccgtcctgg cccggcgcgc tccgtcatcg cccctgccgc acagcgcttt
     9181 ccagcccgcc gaaagcctcg agggcaatta cctcgccgcc tacatcgcca acagcgcccg
     9241 cgacacggcg gccgcggcgg cgttctaccg cgaggcgctg agagccgatc cgaacaatgc
     9301 cgagcttctc gagcgggctt tcgtctcgtt cctcgccgac ggcaccatgc aggaggcgtt
     9361 tcgcacggcc gagcgtctgc tgcagcgcga ccagtccaac ggtctcgcgc atctcgccct
     9421 cggcgtgcgc gacctcaagg cgcggcaatt cacggccgcc cgcaaccacc tgaacagggg
     9481 cggccgcggc cgcctcgtcg acctgaccgc cacgctcttg acgtcgtggt cgctggccgg
     9541 cgccggcgag ggaaagaaag cgctcgagac caccgacaag ctcaagggcg agcgcgccta
     9601 caacgtcttc cgcgactatc atgccggcct gatcgccagc ctgaccggca acaccgccga
     9661 agccgagcgg cgcctgaagg ccgcctacga ggccgacaag gcgacgttgc gcgtcgtcga
     9721 cgcctacggc cgcttcgagt cgcggcgcgg acggaaggac gcggcgctgg ccgcctatag
     9781 cgggttcgac gcgctgctgc cccgccatcc gctggtgcgc gacgcgatgg agcagctgca
     9841 ggccggcaag acgctggcac ccctggtcgg cagcgtcgcc gaaggcgccg ccgaggtgct
     9901 gtacggcctc ggcgccgccg gcaatcagac gggcgacgag ctccccg
//
LOCUS       DATAIQ010001009         2602 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_355481, whole genome shotgun sequence.
ACCESSION   DATAIQ010001009 DATAIQ010000000
VERSION     DATAIQ010001009.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2602)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2602)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2602
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_355481"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..868)
                     /locus_tag="VHN20_16550"
     CDS             complement(<1..868)
                     /locus_tag="VHN20_16550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018444692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HEX2727434.1"
                     /translation="MTAVLHRQIDGAYPVAERGAGVIIRDAAGKDYIDASGGAAVSCL
                     GHGHPDVIAAMKAQLDRLAYAHTSFFTTDVAEELGQDLVAHAPAGVSHIYFVSGGSEA
                     IEAALKLARQYFVEVGEPQRRHFIARRQSYHGNTLGALAVGGNEWRRKQFAPLLIETH
                     HVSPCYEYRDRRDDETAEQYGARLAAELEQTIERLGPETVIAFVAETVGGATSGCITP
                     VPGYYRRIREICDRHGILLILDEVMCGMGRTGTLHACEQEGVAPDLMAIAKGLGGGFA
                     PIGAVLVGAKLYD"
     gene            complement(1094..1546)
                     /gene="amrB"
                     /locus_tag="VHN20_16555"
     CDS             complement(1094..1546)
                     /gene="amrB"
                     /locus_tag="VHN20_16555"
                     /inference="COORDINATES: protein motif:HMM:TIGR04336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AmmeMemoRadiSam system protein B"
                     /protein_id="HEX2727435.1"
                     /translation="MTRSDRPHAPEHAIEVELPFLQHVLPAFDLVPLVAGNAGVDEVG
                     EVLGRLWGGAETLVVVSSDLSHFHPFETARRLDAATAAAIENGTLGAGWARTMPAGSF
                     PLPDSCSRLPRMGSRHGGSGLCNSGDTAGPRDRVVDYGAWTFTPAADA"
     gene            1818..2429
                     /locus_tag="VHN20_16560"
     CDS             1818..2429
                     /locus_tag="VHN20_16560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015950060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF938 domain-containing protein"
                     /protein_id="HEX2727436.1"
                     /translation="MPSSIALISPAAARNRDPILAVLREVLPAAGTVLEIASGTGEHA
                     VHVAAALPGLIWQPSDIDDDALASIAAHRANVALPNLLAPLRLDVTAVSWPVLHADAL
                     VCINMLHIAPWAAAEGLMAGAGRVLASGNVLYLYGPFKQDGRHTAPSNAAFDASLRAR
                     DPRWGVRETGDVADLARRNGFALDRQVAMPANNLSLVFRRDKH"
BASE COUNT          389 a          915 c          891 g          407 t
ORIGIN      
        1 catcgtagag tttcgcgccc acgagcaccg cgccgatcgg ggcgaagccg ccgccgagtc
       61 ccttggcgat cgccatcagg tccggcgcga cgccttcctg ctcgcaggca tgcagcgtac
      121 cggtgcgccc catcccgcac atcacctcgt cgaggatcaa gaggatgcca tggcggtcgc
      181 agatctcgcg gatgcgtctg taatagcccg gaacgggcgt gatgcagccc gatgtcgccc
      241 cgcccaccgt ctcggccacg aaggcgatca ccgtctcggg cccgagcctt tcgatggtct
      301 gctcgagctc agccgcgagc cgcgcgccgt actgctccgc ggtctcgtcg tcgcgcctgt
      361 cgcgatattc gtagcatggt gagacgtggt gggtctcgat cagaagcggc gcgaactgct
      421 tgcgccgcca ttcgttgcca ccaacagcga gggcgccgag ggtgttgccg tggtagctct
      481 ggcggcgggc aatgaagtgc cggcgctgcg gctcgccgac ctcgacgaaa tattgccgcg
      541 ccagcttcag cgccgcttcg atcgcctcgg agcctccgct cacgaaatag atgtggctga
      601 cgcccgccgg cgcatgcgcg acgaggtcct ggccgagctc ctcggccacg tcggtcgtga
      661 agaagctcgt gtgggcgtag gcaagcctgt cgagctgcgc cttcatggcc gcgatcacgt
      721 ccgggtggcc gtgcccgagg cacgacactg ccgccccgcc ggaggcgtcg atatagtcct
      781 tgccggccgc gtcgcggatg atcacgccgg cgcccctctc cgcaaccgga taggcgccat
      841 cgatctgacg atgcaggacg gcggtcatgg aaaatccaac gcggcgggcg gcgccaccga
      901 ggcgcagccg gcgcgggtga tgcagcggcc aatcaccgat ccgcccagtc caaacgtcat
      961 tccgccctcg tgattgtccg gcgttcgttc tgagccggga gccaggtggc gggcactcta
     1021 cagccaaatt gccctcggtc cagagcggcg ctcgcgggcc tgcccttgcg accttcggcg
     1081 gagcaaaatt gcgtcaggcg tcagctgcgg gcgtgaatgt ccaggcacca tagtccacga
     1141 cgcgatcgcg cggtcccgcc gtgtccccgg agttgcacag gcccgagccg ccgtgccgtg
     1201 agcccatgcg cggcagcctg ctgcaggagt ccggcaatgg gaaggaaccc gcaggcattg
     1261 tccgggccca gccggccccc aaggtgccgt tctcgatcgc cgcggcggtg gccgcgtcga
     1321 gccgccgcgc cgtctcaaaa ggatggaaat gggacaggtc ggagctgacc acgacgagcg
     1381 tctccgcgcc gccccacagg cggccgagaa cctcgccgac ctcgtccacg ccggcgttgc
     1441 cggcgacgag cggcacgaga tcgaaggccg gcagcacgtg ctggaggaac ggcagctcca
     1501 cctctatggc gtgctcgggg gcgtgcgggc ggtcgctccg cgtcacgaag gccaggccgg
     1561 cgaggcggca acacgcatga ccccggcggg caggccacct attgtcacgg ctgcggcgcg
     1621 accgttgtcg ggcgcgactg gtacgagctg accgcgtgga acctgaccga cgacggccac
     1681 tgccgcgcct gtggcacgcc ttgcgccggc gtgttcgacg gctcccccgg ccattggggc
     1741 cgacggcggc ggccgatctc aatttcgcct gcgagtgaac gaactatggc cacgcgacgt
     1801 taggcgcctg tgttcccatg ccatccagta ttgccctgat ctcgccggca gcggcgcgca
     1861 accgtgaccc gatcctcgcc gtcttgcggg aggtgctgcc ggccgccgga acggtgctcg
     1921 agatcgcgag cggcacgggc gagcacgcgg tgcatgtggc ggcggcgttg cccggcctca
     1981 tatggcagcc gtcggatatc gatgacgacg cgctcgccag catcgccgcg caccgcgcga
     2041 acgtcgccct gccgaacctg ctggcgccgc tcaggctcga tgtgaccgcc gtgtcctggc
     2101 ccgtcctgca tgctgacgcc ctggtgtgca tcaacatgct gcatatcgcg ccgtgggctg
     2161 cggcagaggg gctgatggcg ggggcggggc gggtgctcgc ttccggcaat gttctctacc
     2221 tttacgggcc gttcaagcag gacggccggc acacggcgcc aagcaacgct gccttcgacg
     2281 ccagcctcag agcccgcgac ccgcggtggg gcgtgcgcga gacgggcgac gtcgccgacc
     2341 tggcgcgtcg gaacgggttc gcactcgacc gtcaggttgc gatgcccgcc aacaacctga
     2401 gcctcgtctt ccggcgtgat aagcactgaa aatggattcg ttcagcaact tcgccgattc
     2461 ggtggctgcc gccgcacctg tcctgctgat cggcgccgtc gtcgttgccg ggctggtttg
     2521 gttcgcgacc ataaccgtgc gccgccgacg cccgcgcggg cccgccgaat gaacgccacc
     2581 ggcggcttgc ccggtcagcc cg
//
LOCUS       DATAIQ010001010         3814 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_217809, whole genome shotgun sequence.
ACCESSION   DATAIQ010001010 DATAIQ010000000
VERSION     DATAIQ010001010.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3814)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3814)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3814
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_217809"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..595
                     /locus_tag="VHN20_16565"
     CDS             <1..595
                     /locus_tag="VHN20_16565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003600675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="S1 RNA-binding domain-containing protein"
                     /protein_id="HEX2727437.1"
                     /translation="GSEVEGEVKNKTEFGLFIGLENDVDGMVHLSDLDWNRPGEQVID
                     EFKKGDVVRAQVLDVDVEKERISLGIKQLAGDPFADAGEGIRKGQVVTCEVLEVKDSG
                     LEVKISDTDLTAFIKRNELARDRGDQRPERFAAGEKVDARVTQFDRKARRVSLSIKAL
                     EVAEEKEAIAQYGSTDSGASLGDILGAALNKARGDKK"
     gene            830..1795
                     /gene="sppA"
                     /locus_tag="VHN20_16570"
     CDS             830..1795
                     /gene="sppA"
                     /locus_tag="VHN20_16570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptide peptidase SppA"
                     /protein_id="HEX2727438.1"
                     /translation="MPIDAEMIADRRRLRRKLSFWRVVGVLALIVAVIVGGLAVAGRT
                     PVEGQEQIARISVSGFIAGSQRMSDLFKRVAEAKSVAGVVISINSPGGTTTGAEELYQ
                     GIRQLAEKKPLVAFVDGTAASGGYITALAADHIVARETSIVGSIGVLFQYPEASQLLD
                     KLGVRVEEVKSGPLKAEPSPFHPASPEARAALQNVVNDTYDWFKRLVADRRKLDDAQM
                     GSVSTGRVFNGRQGLPLKLIDEVGGERDAIAWLEREKNVRKDLPVRDWRPRERSRFDL
                     WTGAAVAANALGFETLAVSLRQIGLTTESAKLDGLLALWQPALEK"
     gene            1828..2166
                     /gene="ihfB"
                     /locus_tag="VHN20_16575"
     CDS             1828..2166
                     /gene="ihfB"
                     /locus_tag="VHN20_16575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012452156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0006417 - regulation of translation
                     [Evidence IEA];
                     GO_process: GO:0075713 - establishment of integrated
                     proviral latency [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit beta"
                     /protein_id="HEX2727439.1"
                     /translation="MIKSELVAKIAERHDHLYQRDVENIVNAILDTITEALAHGDRVE
                     LRGFGAFSVKKRAARTGRNPRTGETVSVSEKLIPVFKTGKEMRGRLNKDRNTERNFPE
                     APPRKAAGAQ"
     gene            2179..2532
                     /locus_tag="VHN20_16580"
     CDS             2179..2532
                     /locus_tag="VHN20_16580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007559932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LapA family protein"
                     /protein_id="HEX2727440.1"
                     /translation="MRTFLKTLILLPIAVVVVLLAVANRGPVTLSFDPFSRAAPDAQL
                     TLTVPLFALIFAAVMLGVVIGGVGAWLAQAKHRRAERRYKREVHHLRSDTDRLRARSG
                     STALATLPSASRSGF"
     gene            2553..3512
                     /locus_tag="VHN20_16585"
     CDS             2553..3512
                     /locus_tag="VHN20_16585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018388610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine cyclodeaminase family protein"
                     /protein_id="HEX2727441.1"
                     /translation="MRVVSAAEIDAALGFPALIDALADAFRSDVVVPVRHHHALARGG
                     STATLLLMPAWSAGDGGFIGVKIVSVFPDNNVRNLPSVLGTYLLMDGASGAPLAALDG
                     TRLTLWRTAAASALAGRHLARRDARRMAMVGAGALAPFLIRAHLSQRPLEEIQLWNHR
                     PEKAEHLAKILRGEGMPVRAARDLESAVRGADLVSCATLSTAPLVKGAWLKAGAHLDL
                     VGAFTLSMREADDEALRRASIHVDTAAARSEGGDVALALKSGAISDADVKGDLFDLCR
                     GKAAGRADTDEITVFKSVGTALEDLAAATLAWRSLDHERGRAS"
     gene            3582..>3814
                     /locus_tag="VHN20_16590"
     CDS             3582..>3814
                     /locus_tag="VHN20_16590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012778907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-(5'-phosphoribosyl)anthranilate isomerase"
                     /protein_id="HEX2727442.1"
                     /translation="MSSIVKICGLNSLEALDAALAAGADMVGLVRFARSPRHLELAQG
                     RALSARARGKAERVALVVDADDQALADTIEAFDP"
BASE COUNT          620 a         1319 c         1294 g          581 t
ORIGIN      
        1 cggctccgag gtcgaagggg aggtcaagaa caagaccgag ttcggcctct tcatcggcct
       61 tgagaacgac gtggacggca tggtccatct ctcggacctc gactggaacc gtcccggcga
      121 gcaggtcatc gacgagttca agaagggcga cgtggtgcgc gcccaggttc tcgacgtcga
      181 cgtcgagaag gagcgcatct cgctcggcat caagcagctc gccggcgatc ccttcgccga
      241 tgcgggtgag ggcatccgca agggccaggt ggtcacctgc gaggtgctgg aggtgaagga
      301 ctcggggctg gaggtgaaga tctccgacac cgacctcacc gccttcatca agcgcaacga
      361 actcgcccgc gaccgcggcg accagcgccc cgagcgcttc gccgccggcg agaaggtcga
      421 tgcccgcgtc acgcagttcg accgcaaggc gcgccgcgtg tcgctgtcga tcaaggcgct
      481 cgaagtcgcc gaggagaagg aagcgatcgc ccagtacggg tcgaccgatt ccggcgcctc
      541 gctcggcgac attctcggcg ctgcgctcaa caaggcccgc ggcgacaaga agtgacgcgc
      601 ccttcggcgc atcatcccgg acgcggcccc ggttcaagtc cggggaattg aagccgcgac
      661 cggcgatcgc aaaccaaacc cgcgcgacac gctcgcgcgg gttttttgtt gcgccgcgtc
      721 gcccacgcgc aaagcttcgc cgcacacgcg gcgcttgcga tcgcccgccg gaagagtagt
      781 gtgccgcgct cccccgacgg acccgcctcc gatccaagga atgccgttca tgccaatcga
      841 tgccgagatg atcgctgacc gccggcgcct gcgccgcaag ctgtcgttct ggcgcgtcgt
      901 cggcgttctc gccctgatcg ttgccgtgat cgtcggcggg ctggcggtcg ccgggcgcac
      961 gccggtcgag gggcaggagc agatcgcgcg catctcggtt tccggcttca tcgccggcag
     1021 ccagcgcatg agcgatctct tcaagcgcgt cgccgaagcg aagtcggtgg cgggcgtcgt
     1081 gatctcgatc aactcgccgg gtggcaccac caccggcgcc gaagagctgt atcagggcat
     1141 ccgccaactc gccgaaaaga agccgctcgt cgcgttcgtc gacggcaccg cggcgtcggg
     1201 cggctacatc accgcgctcg cggccgatca catcgtcgcc cgcgagacct cgatcgtcgg
     1261 ctcgatcggc gtgctgttcc agtatcccga ggcgtcgcag cttctcgaca agctcggcgt
     1321 gcgcgtcgag gaggtcaagt cggggccgct caaggcggag ccgagtccgt tccatccggc
     1381 cagtccggaa gcgcgcgccg cgctgcagaa cgtcgtcaac gatacctatg actggttcaa
     1441 gcgcctcgtc gccgaccgcc gcaagctcga cgacgcgcag atgggaagcg tgtcgacggg
     1501 gcgcgtcttc aacggccgcc agggcctgcc gctcaagctc atcgatgagg tcggcggcga
     1561 acgcgatgcc atcgcatggc ttgaacgcga gaagaacgtg cgcaaggatt tgccggtgcg
     1621 cgactggcgg ccgcgcgagc gaagccgctt cgatctgtgg acgggtgccg ccgttgccgc
     1681 caacgccctc ggcttcgaga cgctcgccgt cagccttcgc cagatcggcc tcacgacaga
     1741 aagcgccaag cttgacgggc ttctcgccct ctggcagcct gctctagaaa aataagaatg
     1801 atctcaaagg gatagcggaa ttttcccatg atcaagtcgg agctcgtcgc gaaaatcgcg
     1861 gaacgccacg atcacttgta ccaacgtgac gtggagaata tcgtcaatgc gatcctcgac
     1921 accatcaccg aggcgctcgc gcacggtgac cgggtcgagc tgcgcggctt cggcgccttc
     1981 tcggtcaaga agcgggctgc ccgcaccggc cggaacccac gcaccggcga gaccgtttcc
     2041 gtttctgaaa aactgatccc ggtgttcaag accggcaagg aaatgcgcgg gcggctcaac
     2101 aaggacagga acaccgaacg aaattttcct gaggcgcctc cgcgcaaggc cgcgggggcg
     2161 cagtgacggt ccgaggccat gcgcacgttt ctgaaaacct tgatcctcct gccaattgcc
     2221 gtcgtcgtcg tgctgctggc ggtcgccaac cgcgggccgg tgacgctgtc gttcgacccg
     2281 ttctcgcgcg cggcgcctga cgcgcagctg acgctcacgg tgccgctgtt cgcgctgatc
     2341 ttcgcggccg tcatgctcgg cgtcgtgatc ggcggcgtcg gggcgtggct cgcgcaggca
     2401 aagcatcgcc gggccgagcg gcgctacaag cgtgaggtcc accatctgcg ctcggacacc
     2461 gatcggctgc gggcgcggtc cggctcgacc gcgctggcga cgttgccgtc ggcaagccgc
     2521 tccggcttct gacacgccgg agcgcagcgg cggtgcgcgt cgtttccgcc gccgagatcg
     2581 acgccgcgct cggatttccc gcactgatcg acgcgcttgc cgacgcgttc cgcagcgacg
     2641 tcgtcgtgcc ggtgcgccat caccatgctc tcgcgcgcgg cggcagcacc gcgacgcttc
     2701 tgctgatgcc ggcgtggagc gctggcgacg gcggcttcat cggcgtcaag atcgtctccg
     2761 tctttcccga caacaatgtc aggaatctgc cgagcgtgct cggcacttac ctgctcatgg
     2821 acggcgccag cggcgcgccg ctggcggcgc tcgacggcac gcgcctgacg ctgtggcgca
     2881 ctgccgccgc gtcggcgctg gccgggcgcc acctcgcgcg ccgcgacgcg cgccgcatgg
     2941 cgatggtcgg cgcgggcgcg ctggcaccgt tcctgatccg cgcgcatctg agccagcgcc
     3001 cgctcgaaga gatccagctc tggaaccatc ggcccgagaa ggccgagcac ctcgccaaaa
     3061 ttctccgagg cgaaggcatg cccgtgcgtg cggcccgcga tctcgagagc gcagtgcgcg
     3121 gcgccgacct cgtctcgtgc gcgacgctgt cgaccgcgcc gctcgtcaag ggcgcgtggc
     3181 tcaaggccgg cgcccatctc gacctcgtcg gcgccttcac cttgagcatg cgcgaggccg
     3241 acgacgaggc cctccggcgg gcatcgatcc acgtcgacac cgccgccgcg cggagcgaag
     3301 gcggcgacgt ggcgctggcg ctcaagtcgg gcgcgatctc agacgcggac gtaaagggcg
     3361 acttgttcga cctgtgccgc ggcaaggccg cgggccgcgc cgacacggac gagatcacgg
     3421 tgttcaagtc ggtcggcacc gccctggaag acctggccgc ggcgaccctg gcgtggcgca
     3481 gcctggacca tgagagaggc cgggcttcgt gataacctcg cccgtcggga gacaccgcgc
     3541 accagtggac aacgccggcc ctacatgtca gggcgtcgcc aatgagttcg atcgtcaaaa
     3601 tctgcgggct caacagcctc gaggcgctcg acgcggcgct cgcggcgggc gccgacatgg
     3661 tcgggctggt gcgcttcgcc cgaagcccgc gccacctcga gctcgcgcag gggcgggcgc
     3721 tgtcggcccg ggctcgcggc aaggctgagc gggtggcgct ggtcgtggat gccgacgacc
     3781 aggccctggc ggacacgatc gaagctttcg accc
//
LOCUS       DATAIQ010001011         3866 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_217872, whole genome shotgun sequence.
ACCESSION   DATAIQ010001011 DATAIQ010000000
VERSION     DATAIQ010001011.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3866)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3866)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3866
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_217872"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1047
                     /gene="dxr"
                     /locus_tag="VHN20_16595"
     CDS             <1..1047
                     /gene="dxr"
                     /locus_tag="VHN20_16595"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003598048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0030604 - 1-deoxy-D-xylulose-5-phosphate
                     reductoisomerase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HEX2727443.1"
                     /translation="EVAVRLGADFAALSEPAGGAELKAALSGTSIASGAGPGAVREAV
                     EREADIVVAAITGTAGLMPTHMALQPGRRIALANKETLVAAGAPFMRDARRVGAAILP
                     VDSEHNALRQALGAGRLEDVVSMTLTASGGPFRTWTRERMAVATRSQASAHPVWSMGA
                     KINIDSASLMNKGLELIEAHHLFGLGPDRLDVLVHPQSIIHGLVQWCDGAVTAGLAAP
                     DMRVPIANCLGDGDRLPFSAQRLDLAAIGSFTFEQPDETRFPCLTLARHVLAEGGAMP
                     TVLNAANEVAVQAFIAGEIGFLDIPRIVERTCDTNRLSGSRSLSSVEEALAIDHEARQ
                     IAREQLPRAARAAT"
     gene            1071..2237
                     /gene="rseP"
                     /locus_tag="VHN20_16600"
     CDS             1071..2237
                     /gene="rseP"
                     /locus_tag="VHN20_16600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HEX2727444.1"
                     /translation="MELLGLAGGATSSFLIAAISFLFILTIVVFIHELGHFLVGRWCG
                     VGVTAFSIGFGPELIGWNDRHGTRWKISAIPLGGYVKFAGDVNGASVPDPDTLARMTA
                     AERAVSFHHKSVPKRAAIVAAGPIANFILAIAVFAGVIYVNGRYVVAPRINAVHAGSA
                     AERAGFQPGDLVVSINGRSITGFADMQRIISSSAGDTLAIAVERGGQPVTLQAVPDTK
                     ETQTPFGKQRIGLLGLEGSRDPADVKLMTYGLLESLRLGVTETWYVVERTIDYIGKLL
                     VGRESADQVSGPLGIAIVSGTVASIGGLNGLISLIAVLSVSIGLINLFPIPLLDGGHL
                     LFYAIEAVRGRPLSDRAQEIGFRIGLAIVVMLMLFATWNDVMHRILPTLLPRGT"
     gene            2409..>3866
                     /gene="bamA"
                     /locus_tag="VHN20_16605"
     CDS             2409..>3866
                     /gene="bamA"
                     /locus_tag="VHN20_16605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003598044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HEX2727445.1"
                     /translation="MMKWTTERRRSSAKSVAVAAIAMAASLTVAESALAQQIVVQGNR
                     RVDADTVRSYVTGSGSGSLEEARRNLLASGMFSDVRIARRGSQIVVTVNENQSINRVV
                     FEGNSKVPRDVLEAEVQAKARGPFSQAVVDADVRRILDIYQRSGRGLAQVTPRVVPLP
                     NGRVDVVYTINEGGKTGVREITFVGNNAYSASRLRGLMATSEMNFLSFMKSNDVYDPD
                     RIASDLELIRRYYLKNGYADFRIIATDAQFDAGRGGYVVTITVEEGQQYRVGDVRVDS
                     RLADVDPGVLRRQVRTSTGQVYNAEAVEKTLTNMTTEVARRGYAFAQVRPAGQRDPAS
                     GTINLAYVVEEGPRVYIERINVRGNSRTRDNVIRREIELGEGDAYNKVLLDRAERRLN
                     SLGYFKKVRVTNEPGSSPDRVVVNIDVEDQPTGSFSIAGGYSTADGFIGEVSVSESNF
                     MGRGQFVRLAGTWGERTQGIDFSFTEPYFLGYRLAA"
BASE COUNT          634 a         1250 c         1303 g          679 t
ORIGIN      
        1 gaggtagccg tgcgcctcgg tgccgatttt gcggctctgt cggagccggc gggcggtgcg
       61 gagctgaagg ccgctttgtc gggcacctca attgcctcgg gggccgggcc gggagcggtc
      121 agggaagccg tcgagcgcga ggccgacatc gtcgtcgcgg cgatcacggg cacggccggc
      181 ctgatgccga cgcatatggc tctgcagccg ggtcgccgca ttgcgcttgc caacaaggag
      241 acccttgtgg cggccggggc gcctttcatg cgcgacgcgc ggcgggtcgg ggcggccatc
      301 ctcccggtcg attcggagca caatgccttg cggcaggcgc tcggggcagg gcgcctcgaa
      361 gatgtcgtgt cgatgacctt gacggcctcc ggcggcccgt tccgcacatg gacgcgggag
      421 aggatggccg tggcgacccg ctcgcaagcc tcggcgcacc cggtctggtc gatgggcgcc
      481 aagatcaaca tcgattccgc cagcctcatg aacaaggggc tcgagttgat cgaggcgcat
      541 cacctgttcg ggctggggcc tgaccgcctg gacgtgcttg tgcatccgca atcgatcatt
      601 catggccttg tgcaatggtg cgacggggcg gtcacggccg gcctcgccgc cccggacatg
      661 cgggttccca tcgccaattg cctcggggac ggcgaccgcc tgcctttttc cgctcagcgt
      721 ctcgatcttg ccgcgatcgg cagctttaca ttcgagcagc cggacgagac ccgcttccct
      781 tgcctgacgc tggcgcggca tgtcttggcc gagggtgggg cgatgccgac ggtgctgaac
      841 gcggcaaacg aggttgcagt ccaggccttc attgccggag agatcggctt cctcgacatt
      901 ccccggattg tcgagcggac ctgcgacacc aacaggttga gcgggtcccg cagcttgtcg
      961 agcgtcgagg aagcgctggc catcgatcat gaggcgcggc agattgcgcg tgagcaattg
     1021 ccacgagccg cccgcgctgc cacctgaaca agagatgcag gagtaggatg atggagcttt
     1081 tggggttggc tggtggtgcg acgagctcgt tcctcatagc cgcgatctcg tttttgttca
     1141 ttttgacgat cgtcgttttc attcacgagc tcgggcattt cctcgttggg cgctggtgcg
     1201 gcgtcggcgt gacggctttt tccatcggat tcggccctga gctgatcggc tggaatgacc
     1261 ggcacggcac gcgctggaag atttccgcca tcccgctcgg tggctacgtc aagttcgccg
     1321 gcgacgtgaa cggcgccagc gtgccggatc cggacaccct ggcgcgcatg acggcggccg
     1381 aacgggcggt cagcttccat cacaagagcg tgccaaagcg cgccgccatc gtggccgccg
     1441 gcccgattgc caatttcatt ctcgccatcg ccgtgtttgc cggggtgatc tacgtcaacg
     1501 ggcgttacgt cgtcgccccg cgcatcaacg cggtccacgc gggaagcgcg gccgagcggg
     1561 ccggtttcca gcccggcgac ctcgtggtct cgatcaacgg ccgcagcatc accggcttcg
     1621 ctgacatgca gcgcatcatc agctcgagcg ccggggacac cctggcgatc gcggtcgagc
     1681 gcggcggcca gccggtcacg ctgcaggccg tgcccgacac gaaggagacg cagacgccgt
     1741 tcggcaagca gcgcatcggt ctgcttggcc tggaagggtc gcgcgacccg gccgacgtga
     1801 agctgatgac ctacggcctg ctcgaatcgc tgcgcctggg tgtgaccgag acgtggtacg
     1861 tggtcgagcg cacgatcgac tatatcggca agctgctggt gggccgcgaa tcggccgacc
     1921 aggtctcggg gccgctcggc atcgcgatcg tgtccgggac ggtcgccagc atcggcggcc
     1981 tcaacggcct gatcagcctc atcgccgtcc tgtcggtttc gatcggcctg atcaacctgt
     2041 ttccgatccc gcttctcgat ggcggtcacc ttttgttcta cgccatcgag gcggtgcggg
     2101 ggcggccctt gagcgatcgg gcccaggaga tcgggttccg catcggcctc gccatcgtcg
     2161 tcatgctgat gctgttcgcc acctggaacg acgtgatgca ccggatcctg ccgacgctgc
     2221 tcccgcgggg aacgtgacac gaaggcaacg tgccccgaaa atccgccggc tcacggcccc
     2281 gcgacgtttg cagaggcatg gaatctcggt aaaccgtttt gaccagaaag ggtcggaagg
     2341 tgtcatgcct tccgatttga gatgggtcac gaagacccgc gtcgaaacaa agaaccgaga
     2401 cgggccactt gatgaaatgg acgactgaac gccggcggag ttcggcgaag agcgttgctg
     2461 ttgcggccat cgcgatggca gcgtcgctga cggtcgccga gagcgcgctc gcccagcaga
     2521 tcgtggtgca gggcaatcgg cgcgtggacg cggatacggt ccgctcctac gtcaccggaa
     2581 gcggctcggg gtctctggag gaggccaggc gcaatctcct ggccagcggc atgttctcgg
     2641 acgtccgcat cgcccgccgc ggttcgcaga tcgtggtcac ggtcaacgag aatcagtcca
     2701 tcaaccgggt cgtcttcgag ggcaactcga aggttccgcg cgatgtcctc gaggcggaag
     2761 tccaggccaa ggcccgcggg ccgttcagcc aggcggtcgt cgatgccgac gtgcgccgca
     2821 ttctcgatat ctaccagcgc agcggacggg gcctggccca ggtcacgccg cgcgtggtcc
     2881 cgttgccgaa tggccgggtc gacgtcgtct acaccatcaa cgagggcggc aagaccggcg
     2941 tcagggagat caccttcgtc ggcaacaacg cctactcggc gtcgcgcctg cgcggtctca
     3001 tggcgacgtc ggaaatgaat ttcctgagct tcatgaagtc caacgacgtg tatgatcccg
     3061 accggatcgc gtccgacttg gagctcatcc gccgctacta cctgaagaac ggctatgccg
     3121 atttccgcat catcgcgacc gacgcgcagt tcgacgcggg ccgcggcggc tacgtcgtca
     3181 ccatcacggt cgaagagggg cagcaatacc gggttggcga cgtgcgcgtc gattcgcgtc
     3241 tcgccgatgt cgacccgggg gtgctgcgcc ggcaggtccg cacttccacg ggccaggtct
     3301 acaacgcaga ggccgtcgag aagacgctga ccaacatgac caccgaggtc gcgcgccgcg
     3361 gctatgcctt cgcgcaggtg cggccggcag ggcagcggga tccggccagc ggcacgatca
     3421 acctcgccta cgtggtcgag gaagggccgc gggtctacat cgagcgcatc aacgtgcgcg
     3481 gcaattcgcg aacccgcgac aacgtcatcc gtcgcgagat cgagctcggc gagggcgatg
     3541 cctacaacaa ggtactgctc gaccgcgccg agcgtcgcct caacagcctc ggctatttca
     3601 agaaggtgcg tgtcaccaac gagccgggct cgtcccccga ccgcgtcgtc gtcaacatcg
     3661 atgtcgagga tcaaccgacg ggctcgttct cgatcgcggg cggctactcg acggcagacg
     3721 gcttcatcgg cgaggtctcg gtcagcgaat cgaacttcat gggccgcggc cagttcgtgc
     3781 gtctggccgg cacctggggc gagcgcaccc aaggcatcga cttctcgttc accgagccct
     3841 atttcctcgg ctatcgcctg gccgcg
//
LOCUS       DATAIQ010001012         1933 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_217961, whole genome shotgun sequence.
ACCESSION   DATAIQ010001012 DATAIQ010000000
VERSION     DATAIQ010001012.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1933)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1933)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1933
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_217961"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..705
                     /locus_tag="VHN20_16610"
     CDS             <1..705
                     /locus_tag="VHN20_16610"
                     /inference="COORDINATES: protein motif:HMM:NF019896.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-Ala-D-Ala carboxypeptidase family
                     metallohydrolase"
                     /protein_id="HEX2727446.1"
                     /translation="PAPAAPQGVRERAAPPPVMFAAKPADEPAYAAASAPAAPPPVVA
                     AGAYAPAAPASASQATSATQATSVPQAASAPIGAEEPVTTGTFTPPRPSSPPALQGAP
                     AGRARMAAKGDTAVSADCPLPVLEAVLADVEAKFGAVTVVATHQHKTVNHVAGSAREK
                     LHHDCKAIDFRPERSHLEEIKAYLRGRPEIAGLDSYRDGVIHMDVAGRAFASPTRRPA
                     AAARAQAGRDAVEAGL"
     gene            862..>1933
                     /locus_tag="VHN20_16615"
     CDS             862..>1933
                     /locus_tag="VHN20_16615"
                     /inference="COORDINATES: protein motif:HMM:NF012573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727447.1"
                     /translation="MALFDARSATQLFNAADPRNVAFSAHLASSPTTYVWSTTGHDRI
                     HARGTGFTTGADRKATGGTATSVAIDLNGDGDIDASIARISVPLTALVASPNSFWQTL
                     LAGHDTLYAATGFGSVLFGDFLEVVGTTFVIGGRDSITGGTGPGQNLYGDAQAVGEHH
                     DAGGDIGKLTGGRDTIIARNTSGNSLIIGDARNVESGSQLRGNADILTGSDGRGDTII
                     GDAERVFDSTATGGNDIINGRGGDDLLIGDVKAVQRFPGATSGPEGVGGNDLINGGGG
                     DDTIMGDFMFVADNQVGAISSAFCGNDRLNGNDGDDVIYGDAVEANDAFLNFGRDQID
                     GVAGDDTIFGDARTLPAGLPPDV"
BASE COUNT          304 a          707 c          664 g          258 t
ORIGIN      
        1 cccgcgcccg cggcgccgca aggcgtgcgg gagcgcgctg cgcctcctcc cgtgatgttc
       61 gccgcgaagc ctgcggacga gccggcctac gccgccgcga gcgccccggc cgcgccgccg
      121 ccggtggtcg ccgcgggcgc atacgccccg gcggcccccg cgtcggcctc gcaggcgacg
      181 tccgcaactc aggccacgtc ggtaccgcag gcggcgtcgg ccccgatcgg cgcggaagag
      241 cccgtcacga ccggcacctt cacgccgcct cgaccgagtt cgccgccagc cctgcagggc
      301 gcgccggccg gcagggcgcg aatggcggcg aagggcgaca ccgccgtttc ggccgattgc
      361 ccgttgcccg tcctcgaggc cgtgctcgcc gacgtggagg cgaagttcgg cgccgtcaca
      421 gtggtggcga cgcatcagca caagaccgtc aaccacgttg cgggaagcgc ccgcgaaaaa
      481 ctgcaccacg actgcaaggc gatcgatttc cggcccgagc gcagccacct cgaggaaata
      541 aaggcctacc tgcgcggccg gccggagatc gccgggctcg acagctatcg cgacggcgtg
      601 atccacatgg acgtcgcggg cagggcattc gcgagcccga cccgtcgtcc cgcagccgcg
      661 gcgcgcgcgc aggccggccg ggacgccgtc gaggctggcc tctgacctga cgccgcacgg
      721 ggtcgcgcaa gggtcgcgga cggcccacgc gctacgatgc ggcgaggtag cctttcccgc
      781 aggtcgtgct accgttcggg cgccggcgga tgtctcgccg cgggacgcgt ccggaccagg
      841 cgttgaagcg cgggtgggac catggctctc ttcgatgcgc gatcggcaac gcagctgttc
      901 aacgcggcgg acccccgcaa cgtggccttc agcgctcatc tcgcgagcag cccgaccact
      961 tatgtctggt cgacgacggg ccacgatcgc atccacgcgc gcggcaccgg cttcaccact
     1021 ggcgcggatc gcaaggcgac cggcgggacg gctacgtccg ttgccattga cctcaacggc
     1081 gacggtgaca tcgatgcgag catcgcccgc atcagcgttc cgctcaccgc gctggtcgcc
     1141 agcccgaact cgttctggca gaccctgctt gccggccacg acacgcttta cgcggccacc
     1201 ggttttggct cggtgctgtt cggagacttc ctcgaggtgg tcggcacgac gttcgtgatc
     1261 ggcggccgcg attcgatcac cggcggcacg gggcccggcc agaatctcta tggcgacgcg
     1321 caggcagtcg gcgagcacca cgacgccggc ggcgacatcg gcaagctgac gggcgggcgc
     1381 gacaccatca tcgccaggaa cacgagcggc aactcgctga tcatcggcga cgcgcgcaac
     1441 gtcgagagcg gcagccagct tcgcggcaac gccgatatcc tgaccggctc cgatggccgc
     1501 ggcgacacca tcatcggcga cgccgagcgc gtcttcgaca gcaccgcgac gggcggcaac
     1561 gacatcatca acggccgcgg cggcgacgac ctgttgatcg gcgacgtcaa ggcggtgcag
     1621 cgcttccccg gcgccacgag tgggccggag ggcgtcggcg gcaacgacct gatcaacggc
     1681 ggcggcggcg acgacaccat catgggcgat ttcatgttcg tcgcggacaa tcaggttggg
     1741 gcgatctcgt ccgccttctg cggcaacgac cgcctcaacg gtaacgacgg cgacgacgtg
     1801 atctacggcg acgccgtcga ggccaacgac gccttcctga atttcggtcg ggaccaaatc
     1861 gatggcgtcg ccggggacga cacgattttc ggcgatgctc gcacgcttcc cgccggcctc
     1921 cctcccgacg tcg
//
LOCUS       DATAIQ010001013         2315 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_263529, whole genome shotgun sequence.
ACCESSION   DATAIQ010001013 DATAIQ010000000
VERSION     DATAIQ010001013.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2315)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2315)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2315
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_263529"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            130..705
                     /locus_tag="VHN20_16620"
     CDS             130..705
                     /locus_tag="VHN20_16620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018453699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727448.1"
                     /translation="MRLTRNPLATGLTAALVAVAAVASAVLFRGFLEPAASRAIRPIW
                     TEAHWPFAVDPWGKGKAFRCRTQDCGGEVHVYVRAKLGFCNCTTGIADDAELDRMGDL
                     DLIGRRTTPAGPGRLITVGPMQGRSRIYRPAGARSSNEAVISTAFNERCDMIAATALL
                     DHPQPETMEAVLVEFLNSEAMLKWTEATLGL"
     gene            935..1153
                     /locus_tag="VHN20_16625"
     CDS             935..1153
                     /locus_tag="VHN20_16625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015932434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727449.1"
                     /translation="MTLLDLFSRGRRTRASGATGDRSAALIFYLLLGLVFAPVIGLHV
                     ALAASDTGMGQPRDSAAHAESVPTRRHR"
     gene            1171..2166
                     /locus_tag="VHN20_16630"
     CDS             1171..2166
                     /locus_tag="VHN20_16630"
                     /inference="COORDINATES: protein motif:HMM:NF013694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046873 - metal ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter CorA family protein"
                     /protein_id="HEX2727450.1"
                     /translation="MMHTYGVRDGRLVRVPAAAAELPRPSDLLWIDLCNPTPEEEKWV
                     ERLLGLQVPTRQEMAEIEESARLYEEHGALVMTAVVINGVAEGKPSRTQVTFVLTRTH
                     LVSVRYADPLPFRNFDAKRQRQAELLTSSDRILASLLESIVERAADVLEMVAADLNEV
                     ANRLFIEDDGAGRRRKAKRVENELQALIKRLGRKNIMVAILRESLLSMSRLIPYLREG
                     ASEWLTNGTPARLKQIDRDLRSLVAYDAQLSSEIVYLHDATLGLINLDQNRIIKVFSI
                     AAVLFLPPTLVGTIYGMNFDSMPELQWRYGYVFALSLMVLSAVVPYYWFKRRGWL"
BASE COUNT          383 a          802 c          762 g          368 t
ORIGIN      
        1 ggcgcgccag cactatgcca agctcgtcga gatggtcgca ggcgacgcca gccggcagga
       61 tctggtcgcc gcacgcgcat acatggccag gaactagcgg caggagcagc gacaaggcga
      121 ggtggcggaa tgcggctcac acgcaacccg ctcgcgaccg ggctgaccgc tgcgctcgtt
      181 gccgtcgcag cggtcgcatc ggcagttctt ttccggggct tcctcgagcc tgcagcgtcg
      241 cgcgccatcc gacccatttg gacggaggcg cattggccgt tcgcggtcga cccctggggc
      301 aaaggcaagg cgttccgctg cagaacgcag gactgcggcg gcgaggtcca tgtctatgtt
      361 cgcgccaagc tcggcttctg caattgcacg accggcatcg ccgacgatgc cgagctggac
      421 cgcatgggcg atctcgacct gatcggccgg cgcacaacgc cggccggccc cggccggctg
      481 atcacggtcg gaccgatgca gggccgtagc cgcatctatc gtcctgcggg tgcgcgaagc
      541 tccaatgaag ccgtgatctc gaccgcgttc aacgagcgct gcgacatgat cgccgcaacc
      601 gccctgctcg atcacccgca acccgagacc atggaggcgg tcctcgtcga gttcctcaac
      661 agcgaagcca tgttgaagtg gacagaagcc acgttgggac tttgaccgga acgatcgcct
      721 ttcggagggg ttgacctcca gccgcacaca gcgcatctgg gccgcgtccg cacgcggctc
      781 cttcgccggc gtgcggcttc gcaggaaccc tgaaccccat gccaagcgac agtagtcgac
      841 caaccgtgcc gccgacggcc gagtgcgtgc ccgcctgatc gcttgatcgg ctcaccacgc
      901 gagcggccga acgcggccgt cgaagaggtg agccatgacc ctcctggatc tgttttcgcg
      961 aggccgccgc acgcgggcct ccggcgcaac cggcgaccgc agtgcggcgc tgatcttcta
     1021 tctcctgctc gggctcgtgt tcgcgcccgt catcggcctg cacgtcgctc tcgccgcgtc
     1081 ggacaccggc atggggcaac cgcgggatag cgccgcgcac gcggagagcg tgccgacccg
     1141 ccggcaccgc tgaacagcga ggcggcgacc atgatgcata cctacggcgt gcgcgacggc
     1201 cgcctcgtcc gcgtccccgc cgcggcggcc gagctgccgc gcccgtcgga cctcctctgg
     1261 atcgacctct gcaatccgac gcccgaggaa gagaaatggg tcgagcggct gctcgggctg
     1321 caggtgccga cgcgccagga aatggcggaa atcgaggaat cggcgcgtct ttacgaggag
     1381 cacggcgccc tcgtcatgac cgcggtcgtg atcaacggcg tcgccgaggg caagccgtcg
     1441 cgcacccagg tcaccttcgt cctgacgcgc acgcatctcg tctccgtgcg ctatgccgac
     1501 cccctgccct tccgcaattt cgatgccaag cggcagcggc aggccgagct tctcacgagc
     1561 agcgacagga tcctggcctc gctcctggag agcatcgtcg agcgcgccgc cgacgtgctc
     1621 gagatggtgg ccgccgacct gaacgaggtc gccaaccggc tgttcatcga ggacgacggc
     1681 gccggccgac ggcgcaaggc caagcgcgtc gagaacgagc tgcaggcgct catcaagcgg
     1741 ctcgggcgca agaacatcat ggtggcgatc ctgcgcgaga gcctgctgtc gatgtcgcgt
     1801 ctgatcccct atctgcgcga gggggccagc gagtggctga ccaacggcac gccggcgcgg
     1861 ctcaagcaga tcgaccgcga cctgcgctcg ctcgtcgcct acgacgcgca gctgtcgtcg
     1921 gagatcgtct acctgcacga tgcaacgctg gggctgatca acctcgacca gaaccgcatc
     1981 atcaaggtgt tctcgatcgc cgcggtgctg tttctgccgc cgacgctggt cggcaccatc
     2041 tatggcatga acttcgactc tatgccggag ctgcagtggc gatacggcta cgtcttcgcg
     2101 ctgtcgctga tggtcctctc ggccgtggtc ccctattact ggttcaagcg ccgcgggtgg
     2161 ttgtaaggcc gcggcaactc ccgctcgtcc tcacccgctt catggctggc tttcacgagg
     2221 cgcatagatc aggattgggc cagatcggag gctgcgcgac ggcttgatgt cggggccgcg
     2281 aggctgctgc aaccacgccc caagccgaag ggggg
//
LOCUS       DATAIQ010001014         1915 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_218099, whole genome shotgun sequence.
ACCESSION   DATAIQ010001014 DATAIQ010000000
VERSION     DATAIQ010001014.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1915)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1915)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1915
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_218099"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..135)
                     /locus_tag="VHN20_16635"
     CDS             complement(<1..135)
                     /locus_tag="VHN20_16635"
                     /inference="COORDINATES: protein motif:HMM:NF012621.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heavy-metal-associated domain-containing
                     protein"
                     /protein_id="HEX2727451.1"
                     /translation="MMRDTRNDVMMKVDGMTCEGCADTVRRTIRRLDPQAEVTVDLGR
                     G"
     gene            complement(139..525)
                     /locus_tag="VHN20_16640"
     CDS             complement(139..525)
                     /locus_tag="VHN20_16640"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEX2727452.1"
                     /translation="MPRFLNPPTITPPSSRYSHGVAHDLHGRRLVISGQVGLRPDGTL
                     ADGLEAQLEQCWDNLIAVLRSADMDVADLVKVTIFVTVPEAIAISRQVRERKLGGHAP
                     ASTFLQVAGLARADFLAEIEAEAVKE"
     gene            644..>1915
                     /locus_tag="VHN20_16645"
     CDS             644..>1915
                     /locus_tag="VHN20_16645"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEX2727453.1"
                     /translation="MTEKSGLFRGGKPSILMSGLAALGLVAVIAVSGLVLTAKSPVNA
                     LIWIVLLAGIAAGVFALQQVVVLRLRVDKVSGELDVLSTRLLRVEGRLSDADRHAAPG
                     LTSAVAEVTGEIALLGGLVRDLAVTVASQDKDVASLRDQVRRARDDAPAAAPPLTPRA
                     PARIAAPPSEPEPAPRERPIPSLLPVKGPPPAVPAAPAVAEERRATNEVGDARRIAAV
                     MQAFENDRLDLHLQPIVSLPQRKTRFYEILARLRLADDTILVPAEFVPILERCDLAAE
                     LDRKVLTRAAGIARHLAARGSETKVSCNISPTSLDNGILRAAGRVAEAYPDVADRLIL
                     ELPQAVWRKLDADQAGTLALLRNKGLFFAMDRVTDLRIDPLALAERGVRFLKVPAAML
                     LEPQTARGLDIELGDLTAVLTRAGIRLIAERV"
BASE COUNT          288 a          670 c          649 g          308 t
ORIGIN      
        1 gccgcgcccg agatcgacgg tgacctccgc ctgcgggtcg agcctgcgga tcgtgcggcg
       61 cacggtgtcg gcgcagcctt cgcaggtcat gccgtcgacc ttcatcatga cgtcattgcg
      121 ggtgtcgcgc atcatccatc actccttcac cgcttccgcc tcgatctcgg caagaaagtc
      181 cgcccgtgca aggcccgcca cctgaagaaa cgtcgacgcc ggcgcatggc cgccgagctt
      241 gcgctcgcgc acctggcggc tgattgcgat ggcctcaggc acggtcacga agatggtgac
      301 cttgacgaga tccgccacat ccatgtcggc cgaccggagc acggcgatga ggttgtccca
      361 gcactgctcc agctgcgctt cgagcccatc cgcgagcgtg ccgtccggcc gcaagccgac
      421 ctggcccgag atgacgagcc gtcggccatg caggtcgtga gcgacgccat ggctgtaacg
      481 cgagctcggc ggggtgatgg tcggcggatt cagaaagcgt ggcattttgg taatccttta
      541 acagagtgtt gcaccgcaac ccttgccgcg cgagtccgtg tcagcaaacg atacatggcg
      601 tgattcgcgc aacacagacg cgaacggggg catggcggcg gggatgactg aaaagagcgg
      661 cctcttcagg ggcggcaaac cgtccattct gatgagcggg ctcgccgccc tcgggctcgt
      721 cgccgtgatt gcggtgtcgg gcctggtgtt gacggccaag tcgcccgtca acgcgctgat
      781 ctggatcgtc ctgctggcgg gcattgccgc gggcgtgttc gcgctgcaac aggtggtcgt
      841 cctgcgcctc cgggtcgaca aggtgtcggg cgaactcgac gtgctgtcga cgcgcctgct
      901 tcgggtggaa gggcgtctgt cggacgcgga ccgtcatgcc gcgcccggcc tgacctcggc
      961 ggttgccgag gtcaccggcg agatcgcgct ccttggcggc ctcgtcaggg atctggcggt
     1021 cacggtcgcg agccaggaca aggacgtcgc gtccctcagg gaccaggtgc ggcgggcgcg
     1081 ggacgacgcg ccggccgcgg cgccgccgtt gacgcccagg gcgccggccc ggatcgccgc
     1141 tccgccctcc gagccggagc ccgcgccgcg cgaaaggccg attccgtcgc tgctgcccgt
     1201 caagggacca ccgccggcgg ttccggcggc cccggccgtc gcggaagagc gacgggcaac
     1261 gaacgaggtg ggcgatgcgc gccgcattgc cgcggtgatg caagccttcg aaaacgaccg
     1321 gctcgacctg cacctgcagc cgatcgtatc gctgccgcag cgaaagacgc gcttctacga
     1381 gatcctggcg cggctgcgcc ttgccgacga caccatcctc gtcccggccg agttcgtgcc
     1441 gatcctggag cgctgcgatc tcgccgcgga actcgaccgc aaggtgctca cacgcgccgc
     1501 cggaattgcc cggcatctcg ccgcgcgcgg cagcgagaca aaggtcagct gcaacatctc
     1561 gccgacctcg ctcgacaacg gcatcttgcg cgcggccggc cgcgtcgcgg aggcctatcc
     1621 cgacgtcgcc gaccgtttga tcctggaatt gccgcaggcc gtctggcgca agctcgacgc
     1681 ggatcaggcc ggcacgcttg cgcttctgcg caacaagggc ctgttctttg cgatggaccg
     1741 cgtcacggac ctgcgtatcg accccttggc gctcgccgaa cgcggcgtgc gcttcctcaa
     1801 ggtgccggcc gcgatgctgc tcgagccgca gaccgcccgc ggccttgata tcgagctcgg
     1861 cgatctcacc gcggtcctca cgcgtgccgg cattcgcctc atcgccgagc gcgtc
//
LOCUS       DATAIQ010001015         1682 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_218102, whole genome shotgun sequence.
ACCESSION   DATAIQ010001015 DATAIQ010000000
VERSION     DATAIQ010001015.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1682)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1682)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1682
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_218102"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            46..846
                     /locus_tag="VHN20_16650"
     CDS             46..846
                     /locus_tag="VHN20_16650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727454.1"
                     /translation="MFRKILGKWGASDPDVNGPQRERREPTFDEMPEATSAPVDAPQR
                     SQADLASEGADVLRKLMISHYTDEAGIHIETVLSAAAACAGYQAQCAGLWLIETDQPE
                     AKAFPEVKEVPTAGGDVFIVSELVNQLLAGETDADRLTVLKVVAAGGIGAGGTRLPDM
                     TEVAGRTAGARGSDDYPPLSVPPEHFPEETARAALQLWWPVVTKIFSVAELGRVDPIS
                     RMLALSLMTARLIEAGKDAVAPDTAMQLAMQTAFAMAQVTGVRTELPA"
     gene            complement(873..1349)
                     /locus_tag="VHN20_16655"
     CDS             complement(873..1349)
                     /locus_tag="VHN20_16655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012254548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1178 family protein"
                     /protein_id="HEX2727455.1"
                     /translation="MILYALACDSGHDFESWFPNSAAYDAQAQRGFVTCPFCGSAKVE
                     KQIMAPAVARKDKGSVAPTPEVPAPPPVAPPPQQLTLMSEPERELRAMVKALREHVVR
                     NADYVGKAFADEARKMHYGEIERRSIYGEANAADTKALIEEGIEVHPLPIVPDERN"
     gene            complement(1467..>1682)
                     /locus_tag="VHN20_16660"
     CDS             complement(1467..>1682)
                     /locus_tag="VHN20_16660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020181080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrilase-related carbon-nitrogen hydrolase"
                     /protein_id="HEX2727456.1"
                     /translation="DGRETFGHSLIVDPWGRVLAEAGTEPGVILAEIDVGQVADARTR
                     IPALRHARPFAVEPPPAPAARKQAASA"
BASE COUNT          287 a          534 c          594 g          267 t
ORIGIN      
        1 tgccgtggcc aggcaaggcg gacagcaggc gagtagagtt tttcgatgtt caggaagata
       61 ttgggcaagt ggggagcgag cgaccctgac gtcaatggac cgcagcgcga gcgccgcgag
      121 ccgactttcg acgagatgcc ggaggccacc tcggcgccgg tcgatgcgcc gcagcggagc
      181 caagcggacc tcgccagcga aggcgcggac gtcttgcgca agctgatgat ctctcactac
      241 accgatgaag ccgggatcca catcgaaacg gtcctgagcg cggctgcagc ctgcgccggc
      301 taccaggccc agtgcgcagg cctttggctg atcgagacgg accagccgga ggcaaaggcg
      361 ttcccggagg tcaaggaggt gccgaccgcg ggcggcgacg tcttcatcgt cagcgagctc
      421 gtcaaccagc tgctcgccgg ggagaccgac gccgatcggc tcaccgtctt gaaagtggtg
      481 gcagccggag ggataggagc aggaggaacg cggctgccgg acatgacgga ggtcgcaggc
      541 cgaacggccg gcgcgcgcgg cagcgacgat tacccgcccc tgagcgtgcc gcctgagcac
      601 tttccggagg agactgcgcg cgccgcgttg cagttgtggt ggccagtcgt caccaaaatc
      661 ttctcggtcg cagagcttgg tcgcgtcgat ccgatctcac gcatgctcgc cttgtcgctg
      721 atgaccgcgc ggttgatcga ggccggaaag gatgccgtcg cgcccgacac cgccatgcaa
      781 ttggcgatgc agacggcctt cgcgatggcg caggtgaccg gagtcaggac cgaactgccg
      841 gcctgaacgt cgcgttgccg accgcaagat cgtcagttgc gctcgtccgg gacaatcggc
      901 agcggatgca cctcgatccc ttcctcgatc agagctttcg tgtccgcggc gttggcttcg
      961 ccgtagatcg agcggcgctc gatctcgccg taatgcatct tgcgtgcttc gtcggcgaag
     1021 gctttgccga cgtagtcggc gtttctgacg acgtgctcac gcagcgcctt gaccatagcg
     1081 cgcagctccc gctccggctc cgacatcagc gtcagctgct gcggcggcgg cgcgaccggc
     1141 ggcggcgcgg gaacctcggg cgtcggcgcg acagacccct tgtccttccg cgccacggca
     1201 ggggccatga tctgcttctc cactttggcg gagccgcaga acggacaggt tacgaaaccc
     1261 ctttgcgcct gggcatcgta ggcggcgctg ttggggaacc agctttcgaa gtcatggccg
     1321 ctgtcacagg ccagggcgta gaggatcatg cgtcagcttt agcacgcgag gtttaagagt
     1381 gctaagtggg gagcctgcgg tgacaggaaa agcgtcacag ggtcgccccc aatcggcgtc
     1441 gggcgtcccg gaaagccggc aagggatcag gcgctcgccg cctgcttgcg cgccgccgga
     1501 gcgggtggcg gctcgaccgc aaagggccgg gcatggcgga gcgccggtat gcgggtgcgc
     1561 gcgtcggcga cctggccgac gtcgatctcg gccaggatca cgcccggctc ggtgcccgct
     1621 tcggcgagga cgcggcccca cggatcgacg atcagggaat ggccgaaagt ctcgcgaccg
     1681 tc
//
LOCUS       DATAIQ010001016         1747 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_218176, whole genome shotgun sequence.
ACCESSION   DATAIQ010001016 DATAIQ010000000
VERSION     DATAIQ010001016.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1747)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1747)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1747
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_218176"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..753)
                     /gene="ispH"
                     /locus_tag="VHN20_16665"
     CDS             complement(<1..753)
                     /gene="ispH"
                     /locus_tag="VHN20_16665"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007565327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051745 - 4-hydroxy-3-methylbut-2-en-1-yl
                     diphosphate reductase activity [Evidence IEA];
                     GO_process: GO:0009240 - isopentenyl diphosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0015968 - stringent response [Evidence
                     IEA];
                     GO_process: GO:0046677 - response to antibiotic [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HEX2727457.1"
                     /translation="MLDRSVSGSPHRPVMPPADLPPLEILLCAPRGFCAGVVRAIDAV
                     EKALAIHGPPVYVRHEIVHNKYVVEGLRRKGAVFVDELDEIPDTHAPVIFSAHGVPKA
                     VPDEALARRLFAIDATCPLVTKVHREAEIHHRRGRHVVLIGHDGHPEVVGTMGQLPPG
                     AITLVESVDDVARLAPPPSAPLAYVTQTTLSVDDTRAIIDALTQRFPAIVPPHKEDIC
                     YATTNRQEAVKRVAPAVDAMIVVGAPNSSNSQR"
     gene            979..>1747
                     /locus_tag="VHN20_16670"
     CDS             979..>1747
                     /locus_tag="VHN20_16670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017485863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HEX2727458.1"
                     /translation="MASAASHASFLPPVLVFCTAAVVAVPIFRRLGQSAVLGYLAAGV
                     VIGPFGLSIAQPETVLGVAELGVVLLLFLVGLELKVSRLFSMRRDIFGLGFAQLSVTT
                     LVLAAAIIATKTLSATGALIAAVSLALSATSIALQMLEERGDLQSAYGQRSFAILLFQ
                     DLSIAPILALMPLAATAGVGVEAPASATDILMSAGKAMGALAVVYVVGRYGLNPLFRL
                     LAASGAREVMTASALLVVLGAALLMDYAGLSMAMGAFL"
BASE COUNT          234 a          601 c          598 g          314 t
ORIGIN      
        1 gcgctgggaa ttggaggagt tgggcgcccc gaccacgatc atcgcgtcca ccgcgggggc
       61 gacgcgcttg accgcttcct gccggttggt ggtggcgtag cagatgtcct ccttgtgcgg
      121 cggcacgatc gccggaaagc gttgcgtgag cgcgtcgatg atggcgcggg tgtcgtcgac
      181 cgaaagcgtc gtttgcgtca cataggcgag cggggccgat ggcggcggcg caaggcgcgc
      241 cacgtcgtcg acggattcga cgagcgtgat cgcgcccggc ggcagctgcc ccatcgtgcc
      301 cacgacttcc gggtgcccgt catggccgat cagcacgaca tgccggcccc gcctgtggtg
      361 gatttccgcc tcgcggtgga ccttggtgac cagggggcag gtcgcgtcga tggcgaagag
      421 gcgccgggcg agcgcctcgt cgggaaccgc tttaggcacg ccatgcgccg agaagatcac
      481 cggcgcgtgg gtgtcgggaa tctcgtcgag ctcgtcgacg aacaccgccc ctttgcggcg
      541 cagcccttcg accacgtatt tgttgtgcac gatctcgtgc cgcacgtaga ccggcggccc
      601 gtggatggcg agcgccttct cgacggcgtc gatcgcccgc accacgccgg cgcagaagcc
      661 gcgcggggcg cagaggagga tttcgagcgg aggcagatcg gccggcggca tgacgggccg
      721 atgtggcgag cccgacactg acctgtcaag cataagcgag gccgcaacgt cccggctgcg
      781 tcagcaggga cccgtccgag cgttccggag cgaaggaaag accttcacgc attcaatagg
      841 ttacaggcca atgagcgtgg atttcgaggg tcatggccag tcgccccgga cgcaggcctt
      901 tcacgatcgc gctccggtgc gatagacagc gacccgcaaa ctcaccctcc ccctctccgg
      961 attcgcctta gcccagtcat ggccagcgcc gcctcgcatg ccagcttcct gccgcccgtc
     1021 ctcgtattct gcacggcggc cgtggtggcg gtcccgatct tccgccgtct cgggcagagt
     1081 gcggtgctcg gctatctcgc cgccggggtg gtcatcggac cgttcgggct ctcgatcgcg
     1141 cagccggaaa ccgtgctcgg cgtcgccgag cttggcgtcg tgctgctcct gttcctggtc
     1201 gggctcgagc tcaaggtgtc gcggctcttc tcgatgcgcc gcgacatctt cgggcttggt
     1261 ttcgcgcagc tgtccgtcac caccctggtc ctcgcggcgg cgatcatcgc caccaagacg
     1321 ctgtcggcga ccggcgccct gatcgcggcc gtctcgctcg cgctctcggc gacatcgatc
     1381 gcgctgcaga tgctggagga gcgtggcgac ctgcagtcgg cctacggcca gcgctcgttc
     1441 gccatcctcc tgttccagga cctctcgatc gcaccgatcc tggccttgat gcccctcgcg
     1501 gcgacggccg gcgtcggtgt cgaggctcct gcgtcggcca ccgatatcct gatgtccgca
     1561 ggcaaggcga tgggcgcgct cgccgtcgtc tacgtggtcg gccgctacgg tctcaacccg
     1621 ctgttccggc ttctcgccgc gagcggcgcg cgcgaggtga tgaccgcttc ggcgctcctc
     1681 gtcgttctcg gcgccgcgct gctcatggat tacgccggcc tgtcgatggc catgggcgcg
     1741 ttcctcg
//
LOCUS       DATAIQ010001017         7079 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_218230, whole genome shotgun sequence.
ACCESSION   DATAIQ010001017 DATAIQ010000000
VERSION     DATAIQ010001017.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 7079)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7079)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7079
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_218230"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1431
                     /locus_tag="VHN20_16675"
     CDS             <1..1431
                     /locus_tag="VHN20_16675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015669539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HEX2727459.1"
                     /translation="KGSGYVRGGIFDRIEVLQDGQGTRFRDRHHTRLGAFAATGAPEL
                     REISLFVVPEEFTFDLTEPWQLQLLVQRDVGARDKAFLAFDVGYTLPDRYLRIDKAAA
                     PAPAQPAARPGPRASAASTLNDADALGTPGLEAPLWLRIWQANAISVAVTAVALLALT
                     GIFFFQDLLVRRPRAYVWIRCAYLTFTLVWLGWYANAQLSVVNVVTFTNSLVTGFNWE
                     YFLSAPLVFILWSAVAAGLLFWGRGPFCGWLCPFGALQELLNNIAQAVKVPQVSVPWG
                     LHERLWPIKYIVFLGLFGLSLYSVALAEVLAEVEPFKTAIILKFLREWPFVIYALTLL
                     AAGLFIERFFCRYLCPLGAALAIPGKIRMFEWLKRWPECGSPCQRCAKECPVQSIHPE
                     GFINVNECIYCMHCQELYHDDQRCPHMIQVRLKREKREALSSPSMRSIKDTNGGPVKP
                     IITNKGKVPGKPADQPTTNDVPTTAS"
     gene            1448..3394
                     /gene="nosZ"
                     /locus_tag="VHN20_16680"
     CDS             1448..3394
                     /gene="nosZ"
                     /locus_tag="VHN20_16680"
                     /EC_number="1.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011083147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050304 - nitrous-oxide reductase activity
                     [Evidence IEA];
                     GO_process: GO:0019333 - denitrification pathway [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TAT-dependent nitrous-oxide reductase"
                     /protein_id="HEX2727460.1"
                     /translation="MPKQDNHNGVSRREVLATTAGAAAGATAVAGATALTSGGAIAPA
                     EAQTRPAAPAARPAVANKYEVKPGELDEYYVFFSSGQTGEVRIVGLPSMRELMRIPVF
                     NRDSATGWGQTNESLKVLTEGMTPENREFLKDRGGIFMNGDLHHPHPSFTDGTYDGRY
                     LFANDKSNTRVCRIRLDVMKCDKIVQLPNQATVHGLRVQKYPKTGYVFCNGEDRVPIP
                     NDGKVLDDPKQYWGMFTAVDGETMKVAWQIRVDGNLDNVDADYQGKYAWSTCYNSEEG
                     VTLAEMMAKEQDWVVIFNLKRIEEAVKAGKAQMINGVPVLDGRAGSPYTRYVPVGNSP
                     HGINTAPDGIHFVANGKLSPTVTVFDARKLDDLFDDKIKPRDVVVAEPELGLGPLHTA
                     YDGKGNAYTTLFLDSQVCKWSIDLAKRAFKGEKVNPVIQKLDVHYQPGHNHTSMGQTK
                     EADGKWLISLNKFSKDRFLNVGPLKPENDQLIDISGDRMVLVHDGPSFAEPHDATIVH
                     RSKINPVHVWKRDDPFFADAVKQAAADGVSLETDSKVIRDGNKVRVYMTSAAPAFGLE
                     SFTVKQGEEVTVHVTNVDDVEDLTHGFCIVNYGINFEVAPQATASVTFTASKPGVYWY
                     YCTWFCHAMHMEMQGRMFVEPKNV"
     gene            3400..4791
                     /locus_tag="VHN20_16685"
     CDS             3400..4791
                     /locus_tag="VHN20_16685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012045897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrous oxide reductase family maturation
                     protein NosD"
                     /protein_id="HEX2727461.1"
                     /translation="MAAPRTILCRGTAAILAAGLARPVAAERIVVPPGESDVQALLDR
                     ATDGDVIVLQKGEHRAPLTITRKLTLEGEPGAVLLGPGTGNVVTVLAPGAVVRGFIIR
                     GSGRDLEKMDSGVFIEKSATKALVERNRIEDNLYGVYIHGAAEAVVRGNDIIGMHDGR
                     LNEAGNGVSVWDAPGAKVLNNSFRYGRDGIFSIASRKNVFSGNRFRDLRFAVHYMYTN
                     DGEVSDNISSGNTVGYAVMYSHRLTIRGNVSEADRDRGFLFNFANGSQISGNAVVGRL
                     QPAERWSASTMRGGEAGEHGLPAERASSAAAGARIGPEKCVFIYNTNQNRFRDNWFEG
                     CDIGVHFTAGSEGNELVGNAFVRNRNQVKYVGTRHLDWSKNGRGNYWSDNPAFDLDGD
                     GIADTAYRPNDLVDRVLWTAPQAKVLMNSPAVQVIRWAQAQFPALLPGGVVDSRPLMA
                     PPVSPRFTPGPRP"
     gene            4788..5708
                     /locus_tag="VHN20_16690"
     CDS             4788..5708
                     /locus_tag="VHN20_16690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2727462.1"
                     /translation="MTATVQVHEVGKRFGKVEAVRGASFELREAETIALVGHNGAGKT
                     TLIKLMLGLIQPTAGSVRVLGEDPAAGQFAARRRLGYLPENVSFNAALTGRELLSFYA
                     RLKREPPASVGRLLERVGLGHAADRRVGTYSKGMRQRLGLAQALLGEPRLLLLDEPTT
                     GLDPQLRQSFYDIIEELRGRGATVLLSSHALTELEEHAGRMIIMNRGAKVADGTLDEL
                     RRLAQLPIRIRLKLAKDEAGQASKWLAQVGAWRAINGHVVEIDASPENKIALLRHATG
                     EGVPVEDLDVVPPTLDELYAHFLSSQEAAP"
     gene            5705..6535
                     /locus_tag="VHN20_16695"
     CDS             5705..6535
                     /locus_tag="VHN20_16695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015669543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX2727463.1"
                     /translation="MRNILVVARKEVREALRNRWVLATTLLLMALALTLTFLGSVPTG
                     NVGVRALDVVIVSLSSLTIFLLPLIALLISHDAIVGEMERGTMLLLLSYPVARWQVLL
                     GKFAGHVAILAFSTLLGYGAAAGALAAAGAGIDAESWTAFAAMVGSSVLLGAAFIAVG
                     YLVSALVRDRGTAGGIAIGIWLVFVLIYDMALLGLLVVDQGQTVSAGALDALLLLNPT
                     DAYRLFNLAGFANVSSFSGMAGVAGSSSLTPPALLAALATWTLAPLALAALAFSRREL
                     "
     gene            6532..>7079
                     /locus_tag="VHN20_16700"
     CDS             6532..>7079
                     /locus_tag="VHN20_16700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018237691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrous oxide reductase accessory protein NosL"
                     /protein_id="HEX2727464.1"
                     /translation="MRRIAFISTVAAALALAACNDTKTAQTPPPHELTTTAIGHYCGM
                     NLMEHAGPKAQIILASRREPIWFSSARDAFSFTLLPEEPRDISAIYVSDMGRAASWEE
                     PGTTNWVEAKRAAFVIGSNKKGGMGADETVPFADQAAAHKFAAENGGRVVGFSEVPRE
                     YVLGGGEATSSVDAAATGKHDH"
BASE COUNT         1267 a         2338 c         2258 g         1216 t
ORIGIN      
        1 aagggctcgg gttacgtacg cggcggcatt ttcgatcgca tcgaggtgct gcaagacggc
       61 cagggcaccc gtttccgcga ccggcatcac acccgcctgg gagccttcgc ggctacgggt
      121 gcgcccgagc ttcgcgagat ctcgttgttc gtcgtgccgg aagagttcac gttcgacctg
      181 accgagccgt ggcagctgca gctgctcgtg cagcgcgacg tcggcgcacg cgacaaggca
      241 tttctggcct tcgacgtcgg ctacacgctg cccgacaggt atctgcgcat cgataaggcg
      301 gcggcgcccg cgccggcgca gccggctgcc cgcccgggac cgcgcgcctc cgccgcttcc
      361 accctcaacg atgccgacgc gcttggtacg ccagggctcg aagcgccgtt atggctcagg
      421 atctggcaag cgaacgccat atcggtcgca gtgaccgcgg tcgcgcttct ggcattgacc
      481 ggcatcttct tcttccagga cctgctcgtg cgccgcccgc gcgcctatgt ctggatccgg
      541 tgtgcctacc tcaccttcac gctcgtctgg ctcggctggt acgcgaacgc ccagctgtcg
      601 gtcgtcaacg tcgtcacatt cacgaactcg cttgtgaccg gcttcaactg ggaatacttc
      661 ctatccgcgc cgctggtctt catcctgtgg tctgccgtcg cggcgggcct cctgttctgg
      721 ggccgcgggc cgttctgcgg ctggctgtgc ccgttcggtg cgctccaaga gctgctcaac
      781 aatatcgccc aggcggtcaa ggtccctcag gtcagcgtgc cgtggggact gcacgagcgc
      841 ttgtggccga tcaaatacat cgttttcctc ggcctgttcg ggctgtcact ctattcggtg
      901 gcgctggccg aggtcttggc cgaagtcgag ccgttcaaga cggccatcat cctcaaattc
      961 ttgcgagagt ggccgttcgt gatctacgcg ctgaccctgc tcgcagcggg cctgttcatc
     1021 gagcgcttct tctgccgcta cctttgcccg ctcggagcgg cgctcgccat acccggcaag
     1081 atccgcatgt tcgaatggct caagcgctgg ccggaatgcg gctcgccatg ccagcgctgc
     1141 gccaaggaat gcccggtcca gtcgatccac ccggaaggct tcatcaacgt caacgagtgc
     1201 atctactgca tgcactgcca ggaactctac cacgacgacc agcgctgccc gcacatgatc
     1261 caggtgcggc tgaaacgcga gaagcgcgag gcgctttcgt cgccgtcaat gcgctcgatc
     1321 aaagatacga acggggggcc tgttaagccg atcatcacaa acaaaggcaa ggtccccgga
     1381 aagcctgcag atcagccgac cacgaacgac gtcccgacga cagcttcatg agcgaaagga
     1441 ggctctgatg cccaagcaag acaaccacaa cggagtaagc cggcgcgagg tgctcgccac
     1501 gactgcgggc gccgccgccg gcgcgaccgc cgttgccgga gccaccgctt tgacatccgg
     1561 cggcgcgatc gcgccggcgg aagcccaaac gaggcccgcg gcgcccgcgg cccgtccggc
     1621 tgtggccaac aaatacgagg tcaagcccgg cgagctcgac gaatattacg tgttcttctc
     1681 gagcggccag acaggcgagg tgcgcatcgt cgggctgccc tcgatgcgtg aattgatgcg
     1741 cattccggtc ttcaatcgcg acagcgcgac cggatggggt cagaccaacg agagcctcaa
     1801 ggtcctcacc gaggggatga cgcccgagaa ccgcgagttt ctcaaggacc ggggcgggat
     1861 cttcatgaac ggggatctcc atcacccgca cccgtccttc acggacggca cctatgacgg
     1921 gcgttacctg ttcgccaacg acaagtcgaa cacccgcgtc tgccgtatcc gcctcgacgt
     1981 gatgaagtgc gacaagatcg tccagctgcc gaaccaggcg acagtccatg ggttgcgtgt
     2041 gcaaaaatac ccgaagaccg gctacgtctt ctgcaacggc gaagatcgcg tgccgatccc
     2101 gaatgacggc aaggtcctcg acgatcccaa gcaatactgg ggcatgttca cggccgtcga
     2161 cggcgagacc atgaaggtgg cctggcagat ccgggtcgat ggcaatctcg acaacgtcga
     2221 tgcggactat cagggcaaat atgcctggtc gacctgctac aactcggagg aaggcgtcac
     2281 cctcgccgag atgatggcga aagagcagga ttgggtcgtc atcttcaacc tcaagcgcat
     2341 cgaggaggcc gtcaaagcgg gcaaggccca gatgatcaac ggcgtccccg tgctcgacgg
     2401 gcgcgcgggc tcgccctaca cgcgctatgt gccggtcggc aacagcccac acggcatcaa
     2461 cacggcgccc gacggcatcc acttcgtcgc caacggcaag ctgtcgccga cagtcacagt
     2521 gttcgacgcg cgcaagctcg acgacctttt cgacgacaag atcaagccgc gcgacgtcgt
     2581 ggtcgcggag ccggagctcg gcctcggacc gttgcacacc gcctatgacg gcaagggcaa
     2641 cgcctacacg acgctgttcc tcgacagcca ggtatgcaaa tggagcatcg atctcgccaa
     2701 acgcgcgttc aagggcgaga aggtcaatcc cgtcatccag aagctggacg tgcactacca
     2761 gccgggccac aaccacacct ccatgggtca gaccaaggaa gcggatggca agtggcttat
     2821 ctcgctcaac aagttctcga aggatcgctt cctcaacgtc ggtccgttga agcccgaaaa
     2881 cgatcagctg atcgacattt cgggtgaccg catggtgctc gtgcacgacg gtccgagctt
     2941 tgccgaaccg cacgacgcca ccatcgtgca tcgctccaag atcaacccgg tccatgtgtg
     3001 gaagcgggac gacccgttct tcgccgatgc cgtcaagcag gctgcggccg acggcgtgtc
     3061 gctcgagacg gactcgaaag tgatccgtga cggcaacaag gtgcgcgtct acatgacatc
     3121 ggcggccccg gccttcggcc tggaaagctt caccgtgaag cagggcgagg aggtcaccgt
     3181 ccatgtcacc aatgtcgatg acgtcgagga cctcacccac ggcttctgta tcgtcaacta
     3241 cggcatcaac ttcgaggtcg cgccccaggc cacggcgtcg gtgaccttta cggcaagcaa
     3301 gcccggcgtc tactggtact actgcacctg gttctgccac gcgatgcata tggagatgca
     3361 ggggcgaatg ttcgtcgagc cgaagaacgt ctgagagcca tggcggcgcc tcggaccata
     3421 ctgtgccggg gcacggcggc gatcctcgcc gccggcctcg cgcggccggt cgcggcggaa
     3481 cgcatcgtgg tgcctccggg cgagagcgac gtgcaggcgc tcctcgaccg cgctacggac
     3541 ggggacgtga tcgtgttgca aaagggcgag caccgcgccc cgctcaccat cacgcgcaag
     3601 ctcacgctcg agggggaacc gggcgcggtg ctgctcggcc caggcacggg caacgtggtc
     3661 acagtgctgg cgcccggggc tgtggtgcga gggttcatca tccgaggctc cggacgcgac
     3721 ctcgagaaga tggattcagg cgtcttcatc gagaagagcg cgacaaaggc cctcgttgag
     3781 cgcaacagga tcgaggacaa tctctacggc gtctatatcc atggcgcagc cgaggcggtc
     3841 gtgcgcggca acgacatcat cggcatgcac gacggccgtc tcaacgaggc cggcaacggc
     3901 gtctcggtgt gggatgcgcc cggcgccaag gtcctcaaca acagcttccg ctacggacgc
     3961 gatggcatct tctcgatcgc cagccgcaag aacgtgttca gcggcaaccg ctttcgtgat
     4021 ctgcgctttg ccgtgcatta catgtatacc aatgacggcg aggtatccga caacatctcg
     4081 agcggcaaca ccgtcggtta tgcggtgatg tattcgcacc gattgaccat tcgcggcaat
     4141 gtctcggagg ccgaccgcga tcgcggcttt ctgttcaatt tcgccaatgg gtcgcagatc
     4201 agcggcaacg ccgtcgtcgg ccggctgcag cccgccgagc ggtggtccgc ctcgacgatg
     4261 cgcggcggcg aagcgggcga gcacggcttg ccggcagagc gtgcgtcaag cgctgcagcg
     4321 ggagcgcgca taggcccgga aaaatgcgtg ttcatttaca acaccaatca gaaccgcttc
     4381 cgcgacaact ggttcgaggg ttgcgatatc ggcgttcact tcaccgccgg ttcggaaggt
     4441 aacgagctcg tcggcaatgc cttcgtgagg aaccgcaacc aggtcaaata cgtcggcacg
     4501 cgtcatctcg actggtcgaa gaacggccgc ggcaactact ggagcgacaa tcccgccttc
     4561 gatctcgacg gtgacggcat cgccgacacg gcctatcgcc cgaacgacct cgtcgaccgg
     4621 gtgctctgga ccgctccgca ggcgaaggtg ctgatgaaca gcccggccgt gcaggtgatc
     4681 cgctgggcgc aggcgcaatt tccagcgctc ctgccgggcg gtgtcgtcga cagccgtccg
     4741 ctcatggccc cgccggtctc tccaaggttc acgccgggac cacggccatg acggcgaccg
     4801 tgcaggtgca cgaagtcggc aaacgcttcg gcaaggtcga ggcggtgcga ggcgcttcct
     4861 tcgagctgcg cgaggctgaa acgatcgccc tcgtcggcca caacggagcc ggcaagacga
     4921 ccctgatcaa gctgatgctc ggactgatcc agccgacggc cggatcggtg cgcgtgctcg
     4981 gcgaggaccc ggccgccgga cagttcgcgg cgcggcggcg gcttggctat ctgcccgaaa
     5041 acgtctcctt caatgcggcc ctgaccgggc gcgagttgct ctccttctat gctcgcctca
     5101 agcgagagcc gcctgccagc gtcggccggc tgctcgagcg agtcggcctc ggccatgctg
     5161 cggaccggcg cgtcggcacc tattccaaag gcatgcgcca gcggctcggc cttgcgcagg
     5221 cgctgctcgg agaaccgcgg cttctgctcc tcgacgagcc cacgacgggc ctcgatccgc
     5281 agctgcggca atccttctac gacatcatcg aggagctgcg cgggcggggc gcgacggtgc
     5341 tgctgtcgtc ccatgcgctc accgaactcg aagaacatgc cggccgcatg atcatcatga
     5401 acaggggggc aaaggtcgcg gacggcacgc tcgacgagct tcggcgcttg gcgcagctgc
     5461 caatccgcat ccgtctgaag ctggcgaagg acgaggccgg gcaggcctcg aaatggctgg
     5521 cgcaggtcgg cgcgtggcgg gccatcaacg gccacgtcgt tgagattgac gcgtcgccgg
     5581 aaaacaagat cgcgctgctg cgccacgcca ccggggaagg tgttccggtc gaggatctcg
     5641 acgtcgtgcc tccgacgctg gacgagctct acgcgcattt cctcagttca caggaggcgg
     5701 cgccgtgaga aacatcctgg tcgttgcgcg caaggaggtt cgtgaggcgc tccgaaaccg
     5761 ctgggtgctc gcgaccacgc tgctgctcat ggcgctcgct ctgacgctga cattcctcgg
     5821 cagcgtgcca accggaaatg tcggcgtgcg cgcgcttgac gtggtgatcg tgagtctgtc
     5881 gagcctaacg atcttcctgt tgcctttgat cgcgctcctg atctcgcacg acgcgatcgt
     5941 cggcgagatg gaacgcggca cgatgctgct gctcctgagc taccccgtcg cgcgctggca
     6001 ggtgctcctc ggcaagttcg cgggccatgt cgcgatcctc gccttctcca cgctcctggg
     6061 ctatggcgcc gcggcaggcg ccctggccgc cgccggcgcc ggcatcgacg cggagagctg
     6121 gaccgccttc gccgccatgg tcggctcgtc tgtcctgctc ggagcggcgt tcatcgccgt
     6181 cggctacctg gtcagtgcgc tggtgcgcga ccgcggcacc gccggcggca tcgccattgg
     6241 catctggctg gtcttcgtcc tgatctacga catggccctg ctcgggctgc ttgtggtcga
     6301 tcagggccag acggtgtcgg cgggcgctct cgatgcgttg ctcctgctca acccgacgga
     6361 tgcctatcgc ctgttcaacc ttgcgggctt cgccaatgtg agctcgtttt cgggcatggc
     6421 cggcgtagcg ggcagcagct cgctcacgcc ccctgccctc ctcgccgcgc ttgcgacttg
     6481 gacgctggct ccccttgcgc tcgcggcgct cgccttttcg cggagagaat tgtgagacgg
     6541 attgccttca tctccaccgt tgcggccgcc ttggccctgg ctgcttgcaa cgacaccaag
     6601 acggcgcaga cgccgccgcc gcacgagctg accaccacgg cgatcggcca ttattgcggc
     6661 atgaacctca tggagcatgc cgggccgaag gcgcagatca tcctggcgag ccgccgcgag
     6721 ccgatctggt tctcgtccgc acgcgatgcc ttctcgttca cgctacttcc agaagagccg
     6781 agggacatca gcgccatcta cgtgtccgac atgggcaggg cggcgagctg ggaagagcct
     6841 ggcaccacga actgggtcga ggcgaaaagg gcggcgttcg tgatcggcag caacaagaag
     6901 ggcggcatgg gcgccgatga aacggttccg ttcgcagacc aggccgcggc gcacaagttc
     6961 gccgcagaga atggcggccg cgtcgtgggc ttctccgagg tgccgcgcga atacgtgctt
     7021 ggcggcggcg aggcaacgag ctcggtcgat gccgccgcga ccggcaagca cgatcatca
//
LOCUS       DATAIQ010001018         2601 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_218295, whole genome shotgun sequence.
ACCESSION   DATAIQ010001018 DATAIQ010000000
VERSION     DATAIQ010001018.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2601)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2601)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2601
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_218295"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..190)
                     /locus_tag="VHN20_16705"
     CDS             complement(<1..190)
                     /locus_tag="VHN20_16705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018263208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX2727465.1"
                     /translation="MRRLDPVLVDRIAAGEVIERPAAAVKELVENAIDAGAATIEILI
                     EGGGRRLIRVVDDGCGMSE"
     gene            complement(271..1593)
                     /locus_tag="VHN20_16710"
     CDS             complement(271..1593)
                     /locus_tag="VHN20_16710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009494682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HEX2727466.1"
                     /translation="MALEQSIDLALARNIGAAGLPDVAIEAAFAVIENGLARLRREDE
                     SGSLPLLHMPRTRDDLDQIREAAARLRAEATDVVFLGTGGSSLGGQTLAQLRDYGVPG
                     AGRFAENPRVHFLDNLDPVTFDRVLQRLPLTTTRFVAISKSGGTGETLMQTIAVLSAL
                     DRAGLRRRAGELVLGISEPHKPQGRNGLRDLLEPEGVPFLEHHTGIGGRYSVLTNVGL
                     LPAAVLGLNVTAIREGAAQAYDPVRTGQAGRDVPAAVGAAFSLAAALEGKGIAVTMAY
                     ADRLERFTRWWVQLWAESLGKDGKGTQPVAAIGPVDQHSQQQLYLAGPRDKVFTIITT
                     HSAGEGPVIDAALAARAGEPEFGSKRIGDLVAAQGRATADTLARNGRPTRRIHIDRLD
                     ERTLGELLMQTMLETILTGYGLGVDPFDQPAVEEGKVLAKKYLAEAHA"
     gene            complement(1721..>2601)
                     /locus_tag="VHN20_16715"
     CDS             complement(1721..>2601)
                     /locus_tag="VHN20_16715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012454180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HEX2727467.1"
                     /translation="RAQTIAGLRSQANDPGVMASKRFFGEAFPNHPYGRPTAGTIESV
                     EAITRDDLIALHKRIVARGRVKLAMVGAIGPEQLARCVDKVFGELPAAPPLSAAPPVL
                     LTGRGRTIVTDIDVPQSVIRFGTSGVSWRDPEFISAYVLNHILGGGAFTSRLFQEVRE
                     KRGLAYSVGTSLVSYRATAMTWGFTATKNERVGECIEVIQSEMRRLREAGPDDEELRK
                     AKDYLTGSYALGFDTSTKIAHQLAQIAFEGLGIDYIARRNALVSAVTQDDIGRVAERM
                     FDDGMLVVVAGRPTGL"
BASE COUNT          387 a          907 c          893 g          414 t
ORIGIN      
        1 cctccgacat gccgcaaccg tcgtcgacga cccggatcag ccgccgcccg ccgccctcga
       61 tcaggatctc gatcgtcgcc gcgccggcgt cgatggcgtt ttcgaccagt tccttgacgg
      121 ccgccgccgg gcgttcgatc acctcgcccg cggcgatgcg gtcgacgaga accgggtcga
      181 ggcggcgcac ctgcgctctt ccccactcat cccgggcttc ccggagatca gcggcgaagg
      241 gagacgtcgt tgcgctctcg cccgcagcgc tcatgcatgc gcctcggcga ggtatttctt
      301 ggcgagcacc ttgccctcct cgaccgccgg ctggtcgaac ggatcgacgc cgagcccgta
      361 tccggtcagg atcgtctcga gcatcgtctg catgagcagt tcgccgagcg tgcgctcgtc
      421 gagccggtcg atgtggatgc gccgggtcgg gcggccgttg cgcgccagcg tgtcggcggt
      481 ggcgcgccct tgcgcggcga cgaggtcgcc gatgcgcttg ctgccgaatt ccggctcgcc
      541 ggcgcgtgcc gccagggccg cgtcgatcac cggcccctcg ccggcgctgt gcgttgtgat
      601 gatggtgaag accttgtcgc gcgggccggc cagatacagc tgttgctggc tgtgctggtc
      661 gaccgggccg atcgccgcga cgggctgcgt gcccttgccg tccttgccga ggctctccgc
      721 ccacagctgc acccaccagc gcgtgaagcg ctccagccgg tccgcataag ccatggtgac
      781 ggcgatgccc ttgccctcga gcgccgcagc cagtgagaag gcagcgccga cggccgccgg
      841 aacatccctg cccgcctgcc ccgtgcggac cggatcatag gcctgggcgg cgccctcgcg
      901 gatcgccgtg acgttcagtc cgaggaccgc ggccggaagc aggccgacat tggtgagcac
      961 cgagtagcgc ccgccgatgc cggtatgatg ctcgaggaac ggcacgccct cgggctcgag
     1021 aaggtccctc aggccgttcc ggccttgcgg cttgtgcggc tccgagatgc cgagcacgag
     1081 ctctccggca cggcggcgca ggcctgcccg gtcgagcgcg ctcaggacag cgatcgtctg
     1141 catcagggtc tcgccggtgc cgcccgattt cgagatggcg acgaagcgcg tggtcgtgag
     1201 cggcagccgc tgcagcacgc ggtcaaaggt caccggatcg aggttgtcga gaaagtgcac
     1261 gcgcggattc tcggcaaagc ggcccgcccc gggcacgccg taatcgcgca gctgcgccag
     1321 cgtctgcccg cccaggctcg agccgccggt gccgaggaag acaacgtcgg tcgcctcggc
     1381 cctgagacgc gcggcggcct cgcggatctg gtcgagatca tcgcgcgtgc gcggcatgtg
     1441 caggagcggc aggctgccgc tttcgtcttc acgccgcaga cgcgcgagcc cgttctcgat
     1501 caccgcaaag gcggcttcga tggcgacgtc gggaagtccg gcagctccga tgttgcgcgc
     1561 cagcgccagg tcgatcgact gctcgagggc catcatcctc tccggttttt gcgaagcggc
     1621 ggacgatagg cgacgccggt gtaaccggct agtcccattt cgcgcactcc gcgacggagc
     1681 ggcctgcgtg cgccggaagc gcgccgtgaa gcagcggcgc ttacaggccc gtcggacggc
     1741 ctgccacaac gaccagcatg ccgtcgtcga acatgcgctc ggcgacgcgg ccgatatcgt
     1801 cctgcgtcac ggccgagacg agggcattgc ggcgcgcgat atagtcgatg ccgagtcctt
     1861 cgaatgcgat ctgcgccagc tggtgcgcga tcttggtcga ggtatcgaag ccgagtgcgt
     1921 aggagccggt caggtagtcc ttcgccttcc tgagctcctc gtcatccgga cccgcctcgc
     1981 gcagacgacg catctcggac tggatcacct cgatgcattc gccgacgcgc tcgttcttgg
     2041 tcgccgtgaa gccccaggtc atggccgtgg cgcggtagct caccagcgag gtcccgaccg
     2101 agtacgcgag gccgcgcttc tcgcgcactt cctggaacag ccgcgacgtg aaggcgccgc
     2161 cgccaagaat gtgattgagc acgtaagcgg agatgaactc gggatcgcgc cacgacaccc
     2221 cgctcgtgcc gaaccggatc accgattgcg gcacgtcgat atcggtcacg atggtgcggc
     2281 cacggcccgt cagcaaaacc ggcggggcgg cgctgagcgg cggcgctgcc ggcaattcgc
     2341 cgaacacctt gtcgacgcaa cgcgccagct gctcgggacc gatcgcgccg accatggcga
     2401 gcttcacgcg tccacgcgcc acgatgcgct tatgcagcgc gatcagatcg tcgcgcgtga
     2461 tcgcctcgac gctttcgatg gtcccggcgg tcggccgccc atatggatgg ttgggaaagg
     2521 cctcgccgaa aaaccgcttc gaggccatca cgccgggatc gttggcctgg gagcgcaggc
     2581 cggcgatggt ctgggcgcgg a
//
LOCUS       DATAIQ010001019         5482 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_218337, whole genome shotgun sequence.
ACCESSION   DATAIQ010001019 DATAIQ010000000
VERSION     DATAIQ010001019.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 5482)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5482)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5482
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_218337"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..350)
                     /locus_tag="VHN20_16720"
     CDS             complement(<1..350)
                     /locus_tag="VHN20_16720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012168752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX2727468.1"
                     /translation="MSTFSPREIVSELDRYIVGQNDAKRAVAIALRNRWRRQQLEGPM
                     KEEVLPKNILMIGPTGCGKTEISRRLARLAGAPFLKVEATKFTEVGYVGRDVEQIVRD
                     LVEVGIGLIKEDKRR"
     gene            complement(462..1010)
                     /gene="hslV"
                     /locus_tag="VHN20_16725"
     CDS             complement(462..1010)
                     /gene="hslV"
                     /locus_tag="VHN20_16725"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004298 - threonine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0051603 - proteolysis involved in protein
                     catabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease subunit HslV"
                     /protein_id="HEX2727469.1"
                     /translation="MTDDTPRMHATTILMVRRNGRVVIGGDGQVSLGQTIVKGNARKV
                     RRLAKGSVIGGFAGATADAFTLFERLEGKLEQYPGQLMRACVELTKDWRTDRYLRRLE
                     AMMLVADKDVGLLLSGSGDVLEPEGGVMAIGSGGNYALAAARALADTDMDAEAIVRRS
                     LAIAAEICVYTNANVVIESLEG"
     gene            1136..1723
                     /gene="hisB"
                     /locus_tag="VHN20_16730"
     CDS             1136..1723
                     /gene="hisB"
                     /locus_tag="VHN20_16730"
                     /EC_number="4.2.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015822909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004424 - imidazoleglycerol-phosphate
                     dehydratase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazoleglycerol-phosphate dehydratase HisB"
                     /protein_id="HEX2727470.1"
                     /translation="MRAASISRRTAETDVTVSISLDGTGRSSITTGVGFLDHMLELFA
                     RHGLFDLDVKVAGDLHVDHHHTTEDTGIALGQAFLKALGDKKGIVRYADIHLPMDEAL
                     TRVALDLSGRPFLVFRSTFPAEKIGAFDTELVREWFQAFAVNAGVTLHVETLYGDNSH
                     HIAESCFKGLARALRSAVAVDPREEGRVPSTKGSL"
     gene            1735..2223
                     /locus_tag="VHN20_16735"
     CDS             1735..2223
                     /locus_tag="VHN20_16735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012317475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2628 domain-containing protein"
                     /protein_id="HEX2727471.1"
                     /translation="MKVYTLHVPAHAAPGDAEALDDAEFVKDGFAWGAFVFTFLWFFW
                     HRLWLAGLAVLAAVAVLSAVLAVFHISPGASFAAGLLLSFLIGLEASSLRRWTLRKRK
                     PVADVVTAADRDEAEAKSFARWLDRPAEQRVVYRPGSAPMMPYRRPDPVIGLFPETEQ
                     PR"
     gene            2220..2870
                     /gene="hisH"
                     /locus_tag="VHN20_16740"
     CDS             2220..2870
                     /gene="hisH"
                     /locus_tag="VHN20_16740"
                     /EC_number="4.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000107 - imidazoleglycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016884 - carbon-nitrogen ligase activity,
                     with glutamine as amido-N-donor [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HEX2727472.1"
                     /translation="MSVAIIDYGSGNLHSAAKAFERAAREAGLDETVSLTADPDVVRR
                     ADRIVLPGVGAFADCRRGLDNVPGMIDAMTDAVRKQGRPFFGICVGMQLMASRGLEYE
                     TTPGLDWVRGDVKPIRPDDPSLKIPHMGWNTLHAQREHPILNDVPTGPEGLHAYFVHS
                     YALDPADMDDVVAVSDYGGPLTAIVARDNMAGTQFHPEKSQTLGLRLIANFLRWRP"
     gene            2858..3610
                     /gene="hisA"
                     /locus_tag="VHN20_16745"
     CDS             2858..3610
                     /gene="hisA"
                     /locus_tag="VHN20_16745"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003949 -
                     1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HEX2727473.1"
                     /translation="MAPVILFPAIDLKEGRCVRLVQGDMGQATVFNDDPAAQAGTFER
                     QGFEWLHVVDLDGAFAGRPMNAAAVDRILERVTIPVQLGGGIRDMKTVEGWLDKGVVR
                     VIIGTAAVHDPDFVREAARRHPGKIAVGIDAKDGRVAVEGWAQTSTVTAEELGRRFED
                     AGVAAIVYTDIARDGVLKGLNIPMTLALARALTIPVIASGGLASLADIERLVQPDCAV
                     LAGAITGRALYDGRIDPQEALALIRQARPAAK"
     gene            3620..4414
                     /gene="hisF"
                     /locus_tag="VHN20_16750"
     CDS             3620..4414
                     /gene="hisF"
                     /locus_tag="VHN20_16750"
                     /EC_number="4.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013168601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000107 - imidazoleglycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HEX2727474.1"
                     /translation="MLKIRLIPCLDVKDGRVVKGVKFVNLRDAGDPVEAAKAYDAAGA
                     DELCFLDITASHEDRGILLDVVRRTAEACFMPLTVGGGVRNVDDIRRLLLAGADKVSI
                     NTAAVANRAFVKEAAEKFGDQCIVVAIDAKKVSAPGEPDRWEIFTHGGRKATGIDALE
                     YAHAVASLGAGELLVTSMDRDGTKAGYDIALVRAIADAVPVPVIASGGVGDLDHLVAG
                     VRDGHASAVLAASIFHFGEYSVAEAKAHMAQAGIAMRLDGTERGQR"
     gene            complement(4603..>5482)
                     /locus_tag="VHN20_16755"
     CDS             complement(4603..>5482)
                     /locus_tag="VHN20_16755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019904369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="S1 RNA-binding domain-containing protein"
                     /protein_id="HEX2727475.1"
                     /translation="LESNGSYSMASVCGSSLSLMDAGVPLKAPCAGIAMGLIKEGDRF
                     AVLSDILGDEDHLGDMDFKVAGTAQGITSLQMDIKISGITEEIMRVALDQAKDGRTHI
                     LGEMNKAINAPRPELGEHAPRIEVMQIPTDKIREVIGTGGKVIREIVEKTGAKIDIQD
                     DGTVKIASADAKSIKAAYNWIRSITAEPEPGTIYDGTIVKTMEFGAFVNFFGPRDGLV
                     HISELAPRRVQKVTDVVKEGDKVKVKFLGTDERGKVRLSMKVVDQESGEDITEKLKAE
                     RDAEKNREREQRQVAE"
BASE COUNT          859 a         1846 c         1833 g          944 t
ORIGIN      
        1 cggcgcttgt cttccttgat caggccgatg ccgacttcga ccagatcgcg cacgatctgc
       61 tcgacgtcgc ggccgacata gccgacctcg gtgaacttcg tggcttcaac cttgaggaag
      121 ggcgcgccgg cgagccgcgc cagccggcgc gagatttccg tcttgccgca gccggtcggc
      181 ccgatcatca ggatgttctt cgggagcacc tcctccttca tggggccctc gagctgctgt
      241 cggcgccagc ggttgcgcaa ggcgatggcg acggcgcgct tggcgtcgtt ctggccgacg
      301 atgtagcgat cgagctcgga gacgatttcg cgaggcgaga aggtgctcat gtcacgataa
      361 cgggtcggtt ggcgggggcg tggcggcccg gacggagact ggagacgcgc cgcgcggcgc
      421 gcagcagcga tcatgcggga ggagcacgga ggctctcggg atcatccttc caggctttcg
      481 atcaccacgt tggcgttggt gtagacgcag atttccgccg cgatcgccag cgagcggcgc
      541 acgatcgctt cggcatccat gtcggtatcg gcaagcgcgc gggcggccgc gagggcatag
      601 ttgccgcccg agccgatcgc catgacgccg ccttccggct cgagcacgtc gccgctgccg
      661 gacaggagga ggccaacgtc cttgtcggcc acgagcatca tggcttcaag gcgccgcagg
      721 tagcggtccg tgcgccaatc cttggtcagc tcgacgcagg cgcgcatgag ttggcccgga
      781 tactgctcga gcttgccttc gaggcgctcg aacagggtaa acgcgtcggc cgtggcgccg
      841 gcgaagccgc cgatcaccga tcccttggcg agccggcgca ccttcctggc attgcccttg
      901 acgatggtct ggccgaggct gacctggccg tcgcccccga tcacgacgcg cccgttgcgc
      961 cggaccatca ggatcgtcgt ggcatgcatg cggggggtgt cgtcggtcat gaggcggagg
     1021 cggacctgcg ggggacccct cacttaagca tggccccgga aaaatccagc cgggtggcgt
     1081 tcccgggtta cccttgctag agagccggcc taagagcccc aggatgagat gacccatgcg
     1141 cgccgcgagc atcagccgcc gcaccgccga aaccgacgtg accgtgtcga tcagcctcga
     1201 cggcaccggc cgctcgagca tcacgaccgg ggtcggcttc ctcgatcaca tgctggagct
     1261 gttcgcgcgg cacggcctgt tcgaccttga cgtcaaggtg gccggggacc tgcatgtcga
     1321 ccaccaccac acgaccgagg acaccgggat cgcgctcggg caggccttcc tcaaggcgct
     1381 cggcgacaag aagggcatcg tccgctacgc cgacatccac ctgccgatgg acgaggcgct
     1441 gacgcgggtc gccctcgatc tctccggccg gccgttcctg gtcttccgca gcaccttccc
     1501 ggccgagaag atcggcgcat tcgacaccga gcttgtgcgc gagtggtttc aggccttcgc
     1561 cgtcaacgcc ggcgtgacgc tgcatgtcga gacgctttac ggcgacaaca gtcaccatat
     1621 tgccgagagc tgcttcaagg gactggcacg cgccttgagg tcggcggttg ccgtggatcc
     1681 gcgcgaagag ggccgggtac cgtcgaccaa gggctcgctt tagcggaggc ccatatgaag
     1741 gtttataccc tgcacgtgcc ggcacatgcc gcgcccggcg acgcggaagc gctcgacgat
     1801 gccgaattcg tgaaggacgg cttcgcgtgg ggcgcgttcg tgttcacctt cctgtggttc
     1861 ttctggcatc gcctgtggct cgcggggcta gctgttctgg cggcggtggc ggttctttcc
     1921 gccgtgctcg cggtatttca cataagtcct ggggcgagct ttgcggccgg gctgcttctc
     1981 agctttctga tcggccttga agcgagcagc ctgcgacgct ggacgttgcg caagcgcaag
     2041 ccggtcgccg acgtcgtcac agccgccgat cgcgacgaag ccgaggccaa gagcttcgcg
     2101 cgttggctcg atcgccccgc ggagcagcgt gtcgtctacc gtcccggcag cgcgccgatg
     2161 atgccgtatc gcaggcccga tcccgtgatc gggctgttcc cggaaacgga gcagccgcgg
     2221 tgagcgtcgc catcatcgat tacggctccg gcaacctgca ttcggctgcc aaggcattcg
     2281 agcgcgcggc gcgcgaagcc ggtctcgacg agacggtctc ccttacggcg gatccggacg
     2341 tcgtgcggcg cgcggaccgc atcgtgctgc cgggggtcgg cgccttcgcc gattgccgcc
     2401 gcggcctcga caatgttccg ggcatgatcg atgcgatgac ggacgcggtg cgcaagcagg
     2461 gccgcccgtt tttcggaatc tgcgtcggca tgcagctcat ggcttcacgc gggctcgaat
     2521 acgagaccac gcctggtctc gactgggttc gcggcgacgt caagccgatc cggccggacg
     2581 atccgagcct caagatcccg catatgggct ggaacacgct gcacgcgcag cgcgagcatc
     2641 cgatcctgaa cgacgtgccg acgggcccgg aagggctgca cgcctatttc gtgcattcct
     2701 acgcactcga tcccgccgac atggacgacg tggtcgcggt cagcgactac ggcgggccgc
     2761 tgaccgccat cgtcgcgcgc gacaacatgg ccggcacgca attccacccc gagaagagcc
     2821 agacgctcgg cctcaggctg attgccaact ttctgcggtg gcgcccgtga tcctgtttcc
     2881 cgccatcgac ctcaaggaag ggcgttgcgt gcgcctcgtg caaggcgaca tgggccaagc
     2941 gaccgtcttc aacgatgacc cggcggcgca ggccgggacg ttcgaacgcc aagggttcga
     3001 gtggctccac gtggtcgatc tcgacggggc cttcgccggc aggccgatga acgccgctgc
     3061 ggtcgaccgc attctcgagc gcgtcaccat tccagtccaa ctcggcggcg gcattcgcga
     3121 catgaagact gtcgaaggct ggctcgacaa gggcgtcgtg cgcgtgatca tcggcacggc
     3181 ggcggtgcac gatcccgatt tcgtgcgcga ggcggcgcgg cgccacccgg gcaagatcgc
     3241 cgtcggcatc gacgccaagg acgggcgggt cgccgtcgag ggctgggcgc agacctccac
     3301 cgtaacggcc gaggagctcg gcaggcgctt cgaggacgcc ggcgtcgccg ccatcgtcta
     3361 tacggacatc gcccgcgacg gcgtgctcaa gggcctcaac atcccgatga cgctggcgct
     3421 cgcgcgcgcc ctgaccatac cggtcatcgc ctcgggcggg cttgcctcgc tcgccgatat
     3481 cgagcgcctt gtgcagcccg actgcgcggt gctcgccggg gccatcaccg ggcgcgcgct
     3541 ctatgatggg cgcatcgatc cgcaggaggc gctcgccctg atccggcagg cgcggcctgc
     3601 tgcaaagtga gcacgagcgt tgcttaagat ccggctcatc ccctgcctcg acgtcaagga
     3661 cgggcgcgtc gtgaagggcg tgaagttcgt caacctgcgc gacgccggcg atcccgtcga
     3721 ggcggcaaaa gcctacgacg ccgccggtgc cgacgagctg tgcttcctcg acatcaccgc
     3781 cagccacgaa gaccgcggca tccttctcga cgtggtccgg cgcacggcgg aggcctgctt
     3841 catgccgctc acggtcggcg gcggcgtgcg caacgtcgac gacatccgca ggctgctgct
     3901 cgccggcgcc gacaaggtgt cgatcaacac ggccgcggtc gccaaccgcg ctttcgtaaa
     3961 ggaggccgcc gagaaattcg gcgatcaatg catcgtcgtg gccatcgacg ccaagaaggt
     4021 atccgctcca ggcgagcctg accgctggga gatcttcacg catggcggcc gcaaggcgac
     4081 tggcatcgac gcgctcgaat atgcgcatgc cgtcgcctcg ctcggagccg gcgagctgct
     4141 cgtgacgtcg atggatcgtg acggcaccaa ggcgggctac gatatcgccc tggtccgcgc
     4201 catcgccgac gcggtgccgg tcccggtgat cgcctcgggc ggggtcggcg atcttgacca
     4261 tctcgtcgcg ggcgtgcgcg acggccacgc gagcgcggtg ctcgccgcct cgatctttca
     4321 tttcggtgaa tattcggttg cagaggcgaa ggcgcatatg gcgcaggccg gcatcgccat
     4381 gcgccttgac ggcaccgagc gcggtcaacg gtagcgtcgc cctacgatcc cgccacggac
     4441 gcgcagcgag acgctgcatc cgcgttcgat cttcccgtgc atatcgaccg ccagaccagc
     4501 tggcgcagca cacgactccg ttgaacccag caaaaaagcc gctcgcctct cggcaagcgg
     4561 cttcggggaa tttcccgggc cgcgggggcc cgggagaata acttactcgg cgacctggcg
     4621 ctgctcgcgc tcgcggttct tctccgcatc gcgctcggcc ttgagcttct cggtgatgtc
     4681 ctcgccgctc tcctgatcaa cgaccttcat cgacaggcgg accttgccgc gctcgtcggt
     4741 gccgaggaac ttgaccttca ccttgtcgcc ttccttgacg acgtcggtga ccttctggac
     4801 gcggcgcggc gccagctcgg agatgtgcac gaggccgtcg cgcgggccga agaagttgac
     4861 gaacgcgccg aactccatcg tcttcacgat ggtgccgtcg tagatcgtgc cgggctccgg
     4921 ttccgccgtg atcgagcgga tccagttgta ggccgccttg atcgacttcg cgtcggcgga
     4981 ggcgatcttg accgtgccgt cgtcctggat gtcgatcttg gcgccggtct tctcgacgat
     5041 ctcgcggatc accttgccac cggtgccgat gacttcgcgg atcttgtcgg tcgggatctg
     5101 catcacctcg atgcgcggcg catgctcgcc gagttccgga cgcggcgcgt tgatggcctt
     5161 gttcatctcg ccgaggatat gcgtgcggcc gtccttcgcc tggtcgaggg cgacgcgcat
     5221 gatctcctcg gtgatgccgg agatcttgat atccatctgc agggacgtga tgccctgcgc
     5281 cgtgccggcc accttgaagt ccatgtcgcc gagatggtcc tcgtcgccaa ggatgtcgga
     5341 cagcaccgcg aagcggtccc cttccttgat gaggcccatg gcgatgccgg cgcagggcgc
     5401 cttcagcggc acgcccgcat ccatcagcga cagcgacgag ccgcagaccg acgccatgga
     5461 atacgaccca ttggactcga gg
//
LOCUS       DATAIQ010001020         2951 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_72594, whole genome shotgun sequence.
ACCESSION   DATAIQ010001020 DATAIQ010000000
VERSION     DATAIQ010001020.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2951)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2951)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2951
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_72594"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..835
                     /locus_tag="VHN20_16760"
     CDS             <1..835
                     /locus_tag="VHN20_16760"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX2727476.1"
                     /translation="AMLAAAWNLLAGYTGQFSLAPATFGMIGAYTTGLLAYHLGAPPL
                     VGIPAAVIVAGLIGLVLGRIVMRLRGPYLALTTLSFAEIMRLVISNSIEFTRGDLGLA
                     VPGLLDSRIAWYYVMLTVLLVLQIGLFLLLRSPAGLYLQAIRDDEVAAASRGVKIVLW
                     KTNAFALSAAISGLAGALYGHFAQLVSPELGLISQTGIIISMVVIGGLGTLVGPIGGA
                     FLVYVTSEFLRDVGGYQLVVFAFLVIVFGRFFREGLWGLLRQALGRRARPVRPAPAPA
                     E"
     gene            844..1566
                     /locus_tag="VHN20_16765"
     CDS             844..1566
                     /locus_tag="VHN20_16765"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX2727477.1"
                     /translation="MPCLSISGVTKHFGGLKALDGAGFEVAEGELVGLIGPNGSGKTT
                     LLNILSGHLAPDAGTVTLDGRSITGLRPERLARLGVLRMFQLTRVFPRMSVLDNLLVA
                     GCALGLTQADAETRARALLDDLSLTRVISLDAGHLSGGQLKLLEFGSCFMVPPRVALL
                     DEPFAAVHPTMKEIMAGFIRRRHAAGQTFILVSHDMPVIVELCPRCVCMNAGTVIADE
                     STRAVLTDPVVIEAYLGEAAAA"
     gene            1563..2306
                     /locus_tag="VHN20_16770"
     CDS             1563..2306
                     /locus_tag="VHN20_16770"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2727478.1"
                     /translation="MSALLTLKDVTAGYVADIDILRTVNVSVAEGAVTGLIGLNGAGK
                     STIMKTICGFLRPKSGAILLGDKDITGIAPHRVIDQGIYYIPQESSLFPYMSVENNLR
                     LPLEHLSRAKGSPTKAEIDARFDDMFQKFPPLRARRGAKAGDLSGGQQKMVEFAKAYL
                     VRPRLCLIDEPSIGLAPKVAEEVYHWIDLFAAQRTAILLVDHNVRRVVTMSAYIYVLS
                     LGEITAAGPPDAFTGDLHDQVKTWLGINF"
     gene            complement(2510..>2951)
                     /locus_tag="VHN20_16775"
     CDS             complement(2510..>2951)
                     /locus_tag="VHN20_16775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phosphotransferase"
                     /protein_id="HEX2727479.1"
                     /translation="HIPADDETAVAHGDYRMGNVMFHAREPRVIAVLDWELSTLGHPL
                     ADLAHSCIAWHSQPDEYCGLVGLDLKALGIPGEADYAAAYYDAAHRKTRMTSFHLAFA
                     LFRFAVIFEGIAARAKAGTAAAANAAEVGHLAVNFARRAREVIA"
BASE COUNT          431 a         1035 c          982 g          503 t
ORIGIN      
        1 cgccatgctg gccgcggcct ggaacctcct cgccggctat accgggcagt tctcgctcgc
       61 gcccgccacc ttcggcatga tcggcgccta caccaccggg ctcctcgcct atcatctcgg
      121 cgcgccgccg cttgtcggca ttccggccgc ggtgatcgtc gccggcctca tcggcctcgt
      181 gctcgggcgc atcgtcatgc gcctgcgcgg cccctatctc gcgctcacga cattgtcctt
      241 cgccgagatc atgcgcctcg tgatcagcaa ctcgatcgag ttcacgcgcg gcgacctcgg
      301 ccttgcggtg ccgggcctgc tcgacagccg gatcgcctgg tattacgtca tgctgaccgt
      361 gctgctggtc ctgcagatcg ggctcttcct tctgctgcgc tcacccgctg gcctctacct
      421 gcaggcgatc cgcgacgatg aggtggcggc ggcgagccgc ggcgtcaaaa tcgtgttgtg
      481 gaagaccaac gccttcgcgc tgagcgccgc gatcagcggc ctggcgggcg cgctctacgg
      541 ccatttcgcg cagctcgtga gccccgagct ggggctgatc tcgcagaccg gcatcatcat
      601 cagcatggtg gtgatcggcg gcctcggcac gctcgtcggg ccgatcggcg gcgccttcct
      661 ggtctacgtt acgtccgagt tcctgcgcga cgtcggcggc taccagctgg tcgtgttcgc
      721 gttcctcgtc atcgtgttcg ggcgcttctt ccgcgaaggc ctgtggggcc tgctgcgcca
      781 ggccctcggc cgcagggcgc ggccggtgcg gcccgcgccg gcgccggcgg aataggagcg
      841 cccatgccct gcctctcgat cagcggcgtc accaagcatt tcgggggcct caaggccctg
      901 gacggcgccg gcttcgaggt cgccgagggc gagctcgtcg gcctgatcgg cccgaacggc
      961 tccggcaaga cgacgctgct caacatcctc agcggccatc tcgcgcccga cgccggcacc
     1021 gtcacgctcg acggtcgttc gatcacgggg ctgcggcccg agcggctggc gcggctcggg
     1081 gtgctgcgca tgttccagct cacgcgcgtg tttccgcgca tgagcgtgct cgacaacctg
     1141 ctcgtcgccg gctgcgcgct cgggctgacg caggcggacg cggagacgcg ggcgcgcgcg
     1201 ctgctcgacg acctgtcgct gacgcgcgtc atcagcctcg atgccggcca cctgtccggc
     1261 ggccagctca agctgctcga gttcggctcg tgcttcatgg tgccgccgcg cgtcgcgctg
     1321 ctcgacgagc ctttcgcggc cgtgcatccg accatgaagg aaatcatggc gggcttcatc
     1381 cgccgccggc acgccgccgg ccagaccttc atcctggtca gccacgacat gccggtgatc
     1441 gtcgaattgt gcccgcgctg cgtgtgcatg aacgcgggca cggtgatcgc cgacgagagc
     1501 acccgtgccg tgctcaccga tccggtggtg atcgaggcct atctcggcga ggcggcggcg
     1561 gcatgagcgc gctgctgacc ctgaaggacg tgaccgccgg ctacgtcgcc gacatcgaca
     1621 tcctgcgcac cgtcaacgtc tcggtggccg agggcgccgt caccgggctg atcggcctca
     1681 acggcgccgg caagtcgacc atcatgaaga cgatctgcgg cttcctgcgg ccgaagtcgg
     1741 gcgccatcct gctcggggac aaggacatca ccggcatcgc cccgcaccgc gtgatcgacc
     1801 agggcatcta ctacatcccg caggaatcga gcctgttccc ctacatgagc gtggagaaca
     1861 acctgcgcct gccgctcgag cacctgtcgc gcgcgaaggg cagcccgacg aaggccgaga
     1921 tcgacgcccg cttcgacgac atgtttcaaa aatttccgcc gcttcgcgcg cgccgcggcg
     1981 ccaaggccgg cgacctgtcg ggcggccagc agaagatggt cgagttcgcc aaggcctatc
     2041 tggtgcgccc gcgcctctgc ctgatcgacg agccgagcat cgggctggcg ccgaaggtgg
     2101 cggaagaggt ctatcactgg atcgacctgt tcgcggcgca gcgcacggcg atcctgctcg
     2161 tcgaccacaa cgtgcgccgg gtcgtgacga tgtcggccta tatctacgtg ctgagcctcg
     2221 gcgagatcac cgccgccggc ccgcccgacg ccttcaccgg cgacctccac gaccaggtca
     2281 agacctggct ggggatcaat ttctaacaac cctcctttgt cattccgggg cggcgcgtcc
     2341 gaactcgggt gttcccgagt tcggcattaa acgtggcgca agtcggcaac agccgacttg
     2401 cgctgccgaa cccggaaccc acgaccgggt gaaccgtacg attgatgtct cacccggtcg
     2461 tgggttccgg gttcgatcct tcggatcgcc ccggaatgac agcgctgggt catgcgatca
     2521 cctccctggc ccgccgcgcg aaattgacgg cgagatggcc gacctcggcg gcgttggcgg
     2581 cggcggccgt tcctgccttg gcgcgcgccg cgatgccttc gaagatcacg gcgaagcgaa
     2641 acagcgcgaa ggcgagatgg aagcttgtca tgcgcgtctt gcggtgcgcg gcgtcgtaat
     2701 aggcggcggc gtagtccgcc tcgccgggaa tgccgagggc cttaagatcg aggccgacga
     2761 gaccgcaata ctcgtcaggc tgcgaatgcc aggcgatgca gctgtgggcg agatcggcga
     2821 gcggatggcc gagggtcgag agttcccagt cgagcaccgc gatcacgcgc ggctcgcgcg
     2881 cgtggaacat cacgttgccc atgcggtagt cgccgtgcgc gaccgcagtc tcgtcgtccg
     2941 ccggaatgtg a
//
LOCUS       DATAIQ010001021         2720 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_264015, whole genome shotgun sequence.
ACCESSION   DATAIQ010001021 DATAIQ010000000
VERSION     DATAIQ010001021.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2720)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2720)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2720
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_264015"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            155..>2720
                     /locus_tag="VHN20_16780"
     CDS             155..>2720
                     /locus_tag="VHN20_16780"
                     /inference="COORDINATES: protein motif:HMM:NF024589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX2727480.1"
                     /translation="MFSDLVGSTALSGRMDPEDLRDVLSAYRRCVTDVVNRYGGYVAK
                     YLGDGALVYFGYPQAREDDAERAVRAGLELIAAVATLASGDRDVPLQSRVGIATGLVI
                     VGDLIGSGEAQERGIVGETPNLSARLQTIAEPDMVVIADDTRRLVGDLFELEDLGAQD
                     LKGISKPTRAWATLRLRPIESRFEALRGSGRTALVGRARETGLLARCWADAKAGNGQV
                     VLLSGEAGIGKSRLTAALLESLDPETHARLRYFCSPQHTDSALHPIIGQMERAAGLAR
                     EDAPRTKLDKLDSLLARSATSAEDAALFADLLSLPSNGRYPPAELAPAQRRQQTLEAL
                     VRQLEALAHAKPVLIIFEDVHWADPTSLEALGQMIDRVADLRVLLIVTSRPDVEPPWS
                     ERRYVTSLALERLPRRDVELVIDRVVGSAALPADVRQDIIERTDGIPLFVEEMTKAVL
                     EAADEADALRTAAAVPAGSSIVPATLHASLTARLDRLGPAREIAQIGAAIGREFSWRL
                     LIAVARRPEAEVASSLDRLVMAGLLFRQGAPPDPTFLFKHALVQDAAYGALLREPRRT
                     LHARIAEAIESHFPDVAESRPELLARHCTEAGLIESAAGLWARAGRRSLARSALREAA
                     EQIARAIDQIATLPPTAARRRDAIRLQVELANALIHTRGHAAPETQASFHRAHELIEQ
                     AEALGEPPEDPLMPFSVLYGFWVANRVALKGDVARELAAQFLARAQERRAAGPLVIGH
                     LVMGISLVITGDFVDGRAHLDQAITLYDPGEHRALATQFAHDARVSAFSWRAIALWAL
                     GHPEAALADVEHALRDARDIGHAATTMYGLSHTALTLIACRRAAAADASIDELAALA"
BASE COUNT          411 a          904 c          972 g          433 t
ORIGIN      
        1 cctcaaggat ctgggcgtcg tccttgtcgg acatcgccgc aagctgctcg atgccatcgc
       61 ggctctgcgg gccgatgcgg aggtgcgggg cggtcatgca gatgtgctgg gcggcccgtc
      121 cggcgatgcc gcggaacgtc gccaggtcac ggtcatgttc agtgacctgg tcggctcgac
      181 ggcgctgtcg ggacgcatgg accctgagga cttgcgcgac gtgctctcgg cttaccggag
      241 atgcgtcacg gacgtggtga accgctatgg cggctacgta gcgaagtatc tcggcgacgg
      301 cgccctggtt tatttcggat acccgcaggc ccgggaggac gatgccgaaa gggctgtccg
      361 ggctggtctc gagctgattg cggccgttgc aaccctggcc agcggcgata gggacgtccc
      421 actccagagc cgggtcggga tcgcgacagg cctggtgatc gttggagacc tgatcggatc
      481 gggcgaggca caggagcgcg gcatcgtcgg cgagacaccc aatctctctg cgcgtctgca
      541 gacgatcgcc gagcccgaca tggtggtcat cgccgacgat acgcgaaggc tcgtcggtga
      601 tctgttcgag ctcgaagatc tcggcgccca ggatctcaag gggatcagca agccgacgcg
      661 ggcatgggcg acgcttcggc ttcggcccat cgagagccgg ttcgaggcat tgcgcgggag
      721 cggccggacg gccctggtcg ggcgggcccg cgaaaccggg ctgcttgccc gctgctgggc
      781 ggacgcaaag gccggaaacg ggcaggtggt gctgctttcg ggcgaggccg gcatcggaaa
      841 gtcccggctg acggccgcgc ttctggagag cctcgacccg gagacgcacg cgcgcctgcg
      901 ttatttctgc tcgccacagc ataccgacag cgctcttcac ccgatcatcg gccagatgga
      961 acgtgcggca gggctggcgc gcgaggatgc gccgcggacg aaactcgata agctcgattc
     1021 gttgctcgcc aggagcgcga cctcggcgga ggatgcggcc ctgttcgccg acctgttgtc
     1081 gttgccgagc aacggacgat atcccccggc ggaactcgcc cccgcgcaac gccggcagca
     1141 gacgctcgaa gcgcttgtgc ggcagctcga ggcgctggcg cacgccaagc cggtgctgat
     1201 catcttcgag gacgtgcatt gggccgatcc gacgagcctc gaggcgctcg ggcagatgat
     1261 tgatcgcgtc gctgatctcc gcgtgctgct gatcgtgacg tcgcgcccgg acgtcgagcc
     1321 accctggagc gagcggcgat acgtcacgag ccttgcgctc gagcgcttgc cgcggcgcga
     1381 cgtcgagctc gtcatcgacc gggtcgtcgg gagcgcggct ctgccggcgg atgtgcgtca
     1441 ggacatcatc gagcgcacgg acggcatccc gcttttcgtc gaggagatga ccaaggccgt
     1501 gctggaggcc gcggacgagg cggacgcgct gcggactgcc gccgcggttc ccgccggctc
     1561 atccattgtc cccgcaacgc tgcatgcgtc cctgacggca cgcctcgacc ggctcgggcc
     1621 cgcgagggag atcgcccaga tcggcgcggc gatcggacgc gagttctcct ggcgcctcct
     1681 gatcgccgtg gcacgccgcc cggaggcgga agtcgcgtcg tcgctcgacc ggctcgtgat
     1741 ggccggcctt ctgttccgcc agggcgcccc gcccgatccg acgtttctgt tcaagcacgc
     1801 gctggtgcag gacgcggcct acggagcact gctgcgcgag ccccggcgca cgcttcacgc
     1861 aagaattgcc gaagccatcg agagccattt tccggatgtc gccgagagcc ggccggaact
     1921 gctggcgcgc cactgcaccg aggcgggcct gatcgagagc gccgcagggc tgtgggcgag
     1981 ggccgggcgg cgttccctcg cgcgctcggc cctgcgcgaa gccgcggagc agatcgcgcg
     2041 cgcgatcgac cagatcgcga ccctgccgcc aacagcggcg cggcggcgcg acgcgatccg
     2101 gctgcaggtc gagcttgcga acgcgttgat ccacaccagg ggccatgccg cgccggagac
     2161 gcaggcgtcg ttccaccgcg cccacgaact gatcgagcag gccgaggcgt tgggagaacc
     2221 tcccgaagat ccgctgatgc cgttctcggt tctttacggc ttctgggtcg ccaaccgtgt
     2281 ggccctcaag ggggatgtgg cgcgcgagct ggccgcgcag tttctggctc gcgcgcagga
     2341 gcgcagggcg gccggcccgc tcgttatcgg gcacctggtg atggggatct cacttgtcat
     2401 cacgggagat ttcgtcgatg ggcgggcgca tctcgaccag gcgatcacgc tgtacgaccc
     2461 cggcgagcat cgcgcgctgg cgacgcaatt tgcccacgac gcccgcgtat cggccttttc
     2521 ctggcgggca atcgcgctgt gggcgcttgg ccatcccgaa gcagctctcg cggatgtcga
     2581 gcatgcgctg cgagacgcgc gcgacatcgg tcatgccgcc acgacgatgt acgggctgtc
     2641 gcatacggcg ctgaccctca tcgcgtgcag acgagcggcc gcggcggacg cctccatcga
     2701 cgaactggca gctctggccg
//
LOCUS       DATAIQ010001022         4308 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_264122, whole genome shotgun sequence.
ACCESSION   DATAIQ010001022 DATAIQ010000000
VERSION     DATAIQ010001022.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4308)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4308)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4308
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_264122"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            59..2335
                     /locus_tag="VHN20_16785"
     CDS             59..2335
                     /locus_tag="VHN20_16785"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009358 - polyphosphate kinase complex
                     [Evidence IEA];
                     GO_function: GO:0008976 - polyphosphate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006799 - polyphosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA degradosome polyphosphate kinase"
                     /protein_id="HEX2727481.1"
                     /translation="MTLDRPSERRDEKAGRQGPPAEETLVKSLEQLAPKPEADRAQPD
                     GQALRHKPERFVNRELSWLQFNHRVLEEASNVRHPLLEQLRFLSISANNLDEFFMVRV
                     AGLVGQLRSGIEMPSEDGLSPQEQLARISAEVSKLASDQQRRWRELRSCLFDDGIILV
                     EGADVTKTEATWLEEHFLHYIFPILTPLAIDPAHPFPFIPNLGLSIALKLYRKSDGRL
                     LNALIRLPNKAERFIRLPDFAETGAARFIALEQVIVLFTSRLFPGYTVQGQGSFRVIR
                     DSDIEVEEEAEDLVRLFESALKRRRRGSVIRLEIEARMDEDLRHFVSEELEIAYDDLF
                     VVDGMLALNDLSQLVALDRPDLKFKPYNPRFPERIREHGGDCFAAIRAKDIIVHHPYE
                     SFDAVVQFLQQAARDPNVVAIKQTLYRTSSDSPIVRALMEAAEAGKSVTALVELKARF
                     DEEANIRWARDLERAGAQVVFGFIELKTHAKLSLVVRREAGQLITYCHAGTGNYHPVT
                     ARIYTDLSFFTADPVIARDVSRIFNFITGYAEPAELERVAVSPVTLRRRMLKHIEEEI
                     AHAKAGRPAAIWGKCNALVDPEIIDALYDASAAGVPVDFVVRGICCLRPGIPGLSDNI
                     RIKSIVGRFLEHSRIYAFGNGHGLPHPKAHVYISSADMMQRNLDRRVEALLPILNTTV
                     HQQVLDQIMMANLLDNEQSWRVLPSGASERVLLADGEEPFNAHQYFMTNPSLSGRGKS
                     LKTSSPRSLASRSSRRSA"
     gene            2340..3848
                     /gene="ppx"
                     /locus_tag="VHN20_16790"
     CDS             2340..3848
                     /gene="ppx"
                     /locus_tag="VHN20_16790"
                     /EC_number="3.6.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004309 - exopolyphosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006798 - polyphosphate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exopolyphosphatase"
                     /protein_id="HEX2727482.1"
                     /translation="MLEAAPGRLKVGRPVAIIDIGSNSVRLVAYEGPTRAPTPLYNEK
                     VLCGLGRQVATTGRLDEEAVTRALKALARFRVLCETMHTREVTVLATAAARDAANGQA
                     FLDAAAEAVGQPIELLSGAREAQLSALGVMSGFHRADGVVGDLGGGSLELTNVVGSDL
                     GEGITLPLGGLALQDLSGGSLKKAQRIAREALARAPQLAELKGRPFYAVGGTWRALAR
                     LHQAERNHPLRVMHGYVIDPKDGLDFLRLVERADAESLKDIESIAEARRPLLAYGALV
                     LEEIIRVGEPKEVVISALGVREGVLFEQLSPEARERDPLLAAASEINLLRSRSPQHCE
                     ELRDWSDRFIESIRIEESDTERRLRHAACLLADIGWRAHPDYRGEQSVNLIAQSALVG
                     VDHPGRAYLALSIFFRHEGLSLDNVSPRLRALAGTHLLARARLLSAVMRVAYPISVAM
                     EGVLPRAPLLARDGEVVLRLPADMAPLANERLVNRMRQLAKLVDLDPRIEVA"
     gene            complement(3858..>4308)
                     /locus_tag="VHN20_16795"
     CDS             complement(3858..>4308)
                     /locus_tag="VHN20_16795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012317513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ribonuclease D"
                     /protein_id="HEX2727483.1"
                     /translation="LKDDAVIDIAVSGPRSVEALGRLRTIPNGFERSKTGGEILAAVE
                     RGLARDPKSVPVPQRHRHRPGNGAVVELLKVLLKAVAEQERVAPKIIATVDELEAIAE
                     DDEAAVPPLKGWRRGLFGDKALALKAGRLGLSIKKGKVVVESVASES"
BASE COUNT          690 a         1508 c         1401 g          709 t
ORIGIN      
        1 gaatccgacg acaatgatta gatagttgtc acacaaatga tgtagagata cgggccagat
       61 gacgttggat cgtccctcag agcggcgtga cgagaaggcc gggcggcaag gccccccggc
      121 cgaggagacg ctcgtcaaga gcctggagca gctggccccg aagccggagg ccgaccgcgc
      181 ccagccggat ggccaggcgc tccggcacaa gccggagcgc ttcgtcaatc gcgagctgtc
      241 ctggctgcag ttcaaccacc gggtccttga agaggcgtcc aacgtccgtc atccgcttct
      301 cgagcagctg cggttcctgt cgatctccgc caacaacctc gacgagttct tcatggtccg
      361 cgtcgcgggc ctcgtcgggc aattgcgctc cggcatcgag atgccgtcgg aggacgggct
      421 gtctccgcag gagcagctgg ccaggatctc ggccgaggtc tcgaagctcg cgtccgacca
      481 gcagcgccgc tggcgcgagc tgcgcagttg cctgttcgac gacggcatca tcctggtgga
      541 gggcgccgac gtcaccaaga ccgaggcgac gtggctcgag gaacatttcc ttcactacat
      601 cttccccatc ctgacgccgc tcgcgatcga tcccgcgcat ccgtttccgt tcattccgaa
      661 cctcggactc tcgatcgcgc tcaagctcta ccggaagtcc gacgggcgtc tgctcaacgc
      721 gctcatccgc ctgccgaaca aggccgagcg cttcatccgg ctgccggact ttgccgagac
      781 cggcgcggcg cggttcatcg ccctcgagca ggtgatcgtg ctgttcacga gccgactgtt
      841 cccgggctac accgtgcagg gccagggttc gttccgcgtc atccgcgact ccgacatcga
      901 ggtcgaggaa gaggcggaag acctcgtgcg cctgttcgag agcgcgctca agcggcgccg
      961 gcgcggcagc gtcatccgcc tcgagatcga ggccaggatg gacgaggacc tgcgccattt
     1021 cgtgtccgag gaactcgaaa tcgcgtatga cgatctgttc gtcgtcgacg gcatgctcgc
     1081 cttgaacgat ctgagtcagc tcgtcgccct cgaccggccg gacctgaagt tcaagcctta
     1141 caatccgcgc tttccggagc gcatccgcga gcatggcggc gattgcttcg ccgcgatccg
     1201 cgccaaggac atcatcgtcc accaccctta cgaatcgttc gacgccgtgg tgcagttcct
     1261 gcagcaggcg gcgcgtgatc cgaacgtggt cgccatcaag cagacgctct accgcacctc
     1321 gtccgactcg ccgatcgtca gggcgctgat ggaggcggcc gaagccggca agtcggtcac
     1381 tgccctggtc gagctcaagg cgcggttcga cgaggaggcc aacatccgct gggcgcgcga
     1441 cctcgagcga gccggcgcgc aggtggtgtt cggcttcatc gagctgaaga cccacgccaa
     1501 gctgtcgctg gtcgtccgcc gcgaagcggg gcagctcatc acctactgcc acgccgggac
     1561 cggcaattac catccggtca cggcgcgcat ctacacggac ctgtcgttct tcacggccga
     1621 tccggtcatc gcccgcgacg tgtcgcgaat cttcaacttc atcaccggct acgccgagcc
     1681 tgccgagctc gagcgggtcg cggtctcgcc cgtcacgctg cgcaggcgca tgctcaagca
     1741 catcgaggag gagatcgccc acgccaaggc cggccgaccg gccgcgatct gggggaaatg
     1801 caacgccctg gtcgatcccg agatcatcga tgcgctctac gatgccagcg ccgccggcgt
     1861 cccggtcgat ttcgtggtgc gcggcatctg ctgcctgcgc ccgggaattc ccgggctgtc
     1921 cgacaacatc cggatcaagt cgatcgtcgg gcgcttcctc gagcacagcc gcatctacgc
     1981 cttcggcaac gggcacggcc tgccgcaccc gaaggcgcac gtctacatct cctcggctga
     2041 catgatgcaa cgcaacctcg accgtcgcgt cgaggcgttg ctgccgatcc tcaacaccac
     2101 cgtgcaccag caggtcctcg accagatcat gatggccaat ctgctcgaca atgagcagag
     2161 ttggagggta ttaccctccg gcgcgagcga gcgcgtcctc cttgccgacg gcgaggaacc
     2221 gttcaatgcg catcagtatt tcatgaccaa tccgagcctg tcgggccgtg gaaaatcgct
     2281 caagacgtcc agccctcgat ctctcgcgag ccgcagcagc cgacgatcgg catgatgcgc
     2341 tgctggaggc ggcgcccggc cgcctcaagg tcggtcgtcc cgtggcgatc atcgacatcg
     2401 gctcgaactc ggtccgtctc gtcgcctatg aagggccgac gcgggccccg accccgttgt
     2461 acaacgagaa ggtcctgtgc ggcctcggcc ggcaggtggc caccaccgga cggctcgacg
     2521 aggaggcggt cacgcgcgca ctgaaggcgc tcgcccgctt ccgggtgctg tgcgagacca
     2581 tgcatacgcg cgaggtgacg gtgctggcga cggccgccgc ccgtgacgct gccaacggcc
     2641 aggcttttct cgacgcggcc gccgaggcgg tcggtcagcc gatcgagctc ttgtccggcg
     2701 cccgcgaggc gcagctctcg gcgctcggag tgatgtccgg ctttcatcgc gccgacggcg
     2761 tggtcggcga cctcggcggc ggcagcctgg agctgaccaa cgtcgtcggc agcgacctcg
     2821 gggagggcat cacgctgccc ctcggcgggc tggcgctcca ggacctcagc ggcggatctc
     2881 tcaagaaggc gcaacgcatc gcgcgcgagg cgctggcgcg ggctccgcag cttgccgagc
     2941 tcaaggggcg cccgttctac gcggtcgggg gaacctggcg tgcgctggca cggctgcatc
     3001 aggctgagcg caaccatccg ctgcgcgtca tgcacggcta tgtcatcgac ccgaaggacg
     3061 gcctcgattt cctccgcctc gtcgagcgcg ccgatgcgga gtccctcaag gacatcgaga
     3121 gcatcgccga ggcccgccgg ccgctcctcg cctacggcgc gctcgtgctc gaagagatca
     3181 ttcgcgtggg cgagcccaag gaagtcgtga tctccgccct gggggtgcgc gaaggcgtcc
     3241 tgttcgagca gctgagcccg gaagcgcgcg aacgcgatcc gctgctcgcc gcggcgagcg
     3301 agatcaacct cctgcggtcg cgatcgccgc aacattgcga ggagctgcgc gactggagtg
     3361 accgcttcat cgaatccatc cggatcgagg agagtgacac cgagcggcgg ctgcgccatg
     3421 ccgcctgcct gctggccgat atcggctggc gcgcgcatcc ggattatcgc ggcgagcaga
     3481 gcgtcaacct gatcgcccag tcggcgttgg tcggcgtcga tcacccgggg cgcgcctacc
     3541 tcgccctgtc gatcttcttc cgtcacgaag gcctgtcgct cgacaacgta agcccacgcc
     3601 tgcgcgcact tgccggcacg catctccttg cgcgggcgcg tctcctcagc gccgtgatgc
     3661 gcgtggccta cccgatctcg gtagcgatgg agggcgtgct gccgcgcgcc ccgctgctgg
     3721 ccagggacgg ggaggtcgtt ctgcgcttgc cggcagacat ggcgccgctc gccaacgagc
     3781 gtctcgtcaa ccgcatgcgc cagctggcga agctggtcga cctcgacccg cgcatcgagg
     3841 tggcctgatc aggccggtca ggactcgctc gcgaccgact cgacgacgac cttgcccttc
     3901 ttgatcgaca gcccgaggcg ccccgccttg agggcgagcg ccttgtcgcc gaacaggccg
     3961 cggcgccagc ctttgagcgg cggcacggcg gcctcgtcgt cttcggcgat cgcttcgagc
     4021 tcgtcgacgg tggcgatgat tttcggcgcg acgcgctcct gctcggcgac cgccttgagc
     4081 agcaccttga gcagctcgac cacggcgccg ttgccgggcc ggtgacggtg ccgctgcggc
     4141 acgggaacgc tcttcggatc gcgcgccagg ccgcgctcga cagcggccag gatctcaccc
     4201 cccgtcttcg agcgctcgaa accgttcggg atcgtgcgca gccgccccaa cgcttcgacg
     4261 ctgcgcggcc cggacaccgc gatgtcgatc acggcgtcgt ccttgagg
//
LOCUS       DATAIQ010001023         3356 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_218713, whole genome shotgun sequence.
ACCESSION   DATAIQ010001023 DATAIQ010000000
VERSION     DATAIQ010001023.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3356)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3356)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3356
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_218713"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(331..1395)
                     /locus_tag="VHN20_16800"
     CDS             complement(331..1395)
                     /locus_tag="VHN20_16800"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX2727484.1"
                     /translation="MANVWNKYEPTAARRHDRRGREVRPKSITIDIHSHVGVPQAAAF
                     VQPHLDVSTIPLAWFQSPETKAVNDKQEVDLKTRITGLDDRLADLDAMGLDMQLIMPP
                     PPQCYYTVPLDIAVKAAQIVNDGLAEYVSRKPDRFVALGTVPMPDGNEAAKELERCMK
                     THRFKGVQILTNIAGNEISDPAYAPFWKKAEELGALVVIHPNGFTHADRLRRFYFNNV
                     IGNPLETTIALHYLIFDGVLERHPHLKILAVHGGGYLGAYWGRIDHAWGARSDCHADL
                     PKPPTHYLRKIYFDTVVFTPEQLQNLIATFGVDHVIMGTDYPFDMADYDPIGHVATAG
                     LDADSYAAIVGGNAKRLLGI"
     gene            complement(1420..2139)
                     /locus_tag="VHN20_16805"
     CDS             complement(1420..2139)
                     /locus_tag="VHN20_16805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009340002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2727485.1"
                     /translation="MARKALNLGNVDAFYGDSHVLHRVSFGLDEGRLLGLLGRNGAGK
                     STCMNVTVGLLPPRAGSVEVFGKPVTNCAPEAIAARGVALVPQGRRIFRSLTVRENLI
                     VAARKPVGGGKALWTLDSVFAMFPRLGERRNQMAGLLSGGEQQMLAIGRALMSNPRVL
                     LMDEPSEGLAPQIVAEVGRTIARLKADGLSIVLVEQNIKLTLNLADEVAIINTGSVVF
                     QGTPAQLTADEAVISQHLGVF"
     gene            complement(2129..2866)
                     /locus_tag="VHN20_16810"
     CDS             complement(2129..2866)
                     /locus_tag="VHN20_16810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003518591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2727486.1"
                     /translation="MNALAVDDLCKSFGGLRVTRNVSFSVEPGERRLIIGPNGAGKTT
                     LFNLITGELKCDSGAIRLFGRDLTRAASRQRAHLGLARTYQIITLFPRDTILRNVTLA
                     LLGLSPFRWNPLVDLDRQAEIRIRAEEALARVGLAHLAARPLSQTSYGERRRVEIAMA
                     LAQNPKVLLLDEPFAGLSVDERRDVRQLLARIPRDVTIVMIEHDMDVALEFADRITLL
                     HFGEVIVEGTRSEVVDDPRTREVYLGA"
     gene            complement(2863..>3356)
                     /locus_tag="VHN20_16815"
     CDS             complement(2863..>3356)
                     /locus_tag="VHN20_16815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009340000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX2727487.1"
                     /translation="CLVSMLLLVRSPFGASLRGTRDQPRRMNALGYHVWLIRFLAFLF
                     SGFWSAVAGLLFVYYNQFISPQVVALQTSAEVLLMVISGGTATLLGPIAGAAIVVVMK
                     NIVSAYVERWNMVLGVIFVAIITFMPEGLVPGSVRLWRMGWQAMRRGRLNVPVVPAPG
                     ERT"
BASE COUNT          550 a         1072 c         1203 g          531 t
ORIGIN      
        1 gccgcgccac catccgggca tgcaggttgt atccgcccgt cggagaggcg cccacgatga
       61 gcttgatcgt ctttccgcga tagaaatcct gtgcgaaggc cggggagaag aggaaacatg
      121 ccgggaccgc tgccaacgcc agggtgcgcc gcgagatcag ccccatcggt ccctcctgcg
      181 aactcgcgca gcgcgacgag ccccggtttg aatgccgctt cgcaaacata tttttgcgcg
      241 agccaggatg tcaacgcggg cgacgcaacc tccgtctccc gcagcctccg tttcatcggc
      301 acgggcatcg ctgtgaggcg agagacggtc tcagatcccc aagagccgct tcgcattgcc
      361 gccgacgatg gcggcatagc tgtccgcgtc aaggccggcc gtggcgacgt ggccgatcgg
      421 gtcgtagtcg gccatgtcga agggatagtc ggtgcccatg atgacgtggt cgacgccgaa
      481 ggtggcgatc aggttctgca gctgctcggg cgtgaacacc acggtgtcga aatagatctt
      541 gcgcaggtag tgggtcggcg gcttcggcag gtcggcgtgg cagtccgagc gcgcgcccca
      601 ggcgtggtcg atgcggcccc aataggcgcc gagatagccg ccgccatgca cggccaggat
      661 cttcaggtgc ggatggcgct cgagcacgcc gtcgaagatc aggtaatgca gcgcaatcgt
      721 cgtctcgagc gggttgccga tgacgttgtt gaagtagaag cgccgcaggc ggtccgcgtg
      781 cgtgaaaccg ttggggtgga tcacgaccag cgcgccgagc tcctcggcct tcttccagaa
      841 cggcgcgtag gcgggatcgg agatctcgtt gccggcaatg ttggtgagga tctgcacgcc
      901 cttgaagcga tgcgtcttca tgcagcgctc gagctccttg gcggcctcgt tgccgtcagg
      961 catcggcacg gtgccgagcg cgacgaagcg gtcgggcttt cgcgacacgt attcggcaag
     1021 gccgtcgttg acgatctgcg ccgccttcac ggcgatgtcg agcggcaccg tgtagtagca
     1081 ttgcggcggc ggtggcatga tcagctgcat gtcgaggccc atggcgtcga ggtcggcaag
     1141 ccgatcgtcg agaccggtga tgcgggtctt gaggtcgacc tcctgcttgt cgttgacggc
     1201 cttggtctcc ggcgactgga accacgccag cgggatcgtc gagacgtcga gatgcggctg
     1261 cacgaaggcc gcggcctgcg gcacgccgac atgcgagtgg atgtcgatcg tgatgctttt
     1321 cggccgcacc tcgcgcccgc gccggtcgtg gcggcgggcg gccgtcggct cgtatttgtt
     1381 ccacacattg gccatggctg aggtccgttt gctgttgggt cagaagacgc cgagatgctg
     1441 cgagatcacc gcctcgtcgg ccgtcagctg ggcgggcgtg ccctggaaga cgaccgagcc
     1501 ggtgttgatg atcgccacct cgtcggcgag gttgagggtg agcttgatgt tctgctcgac
     1561 gagcacgatc gagagcccgt cggccttgag ccgcgcgatg gtgcggccga cctcggcgac
     1621 gatctgcggc gccaagcctt cggacggctc gtccatgagc agcacgcgcg ggttgctcat
     1681 cagcgcccgg ccgatggcga gcatctgctg ctcgccgccg gacaacaggc ccgccatctg
     1741 gttgcggcgc tcgccgaggc gcgggaacat ggcgaagacg ctgtcgagcg tccacagcgc
     1801 cttgccgccg ccgacaggct tgcgcgcggc gacgatcagg ttctcgcgca ccgtcaggct
     1861 gcggaaaatg cgccgtccct gcggaacgag cgcgacgccg cgcgcggcga tcgcctcggg
     1921 cgcgcagttg gtgaccggct tcccgaacac ctcgacgctg ccggcgcgcg gcggcagaag
     1981 gccgacggtc acgttcatgc aggtcgactt gccggcgccg ttgcgaccga gcaggccgag
     2041 cagccggcct tcgtcgagcc cgaaggagac gcggtgcagc acgtggctgt cgccgtagaa
     2101 ggcgtcgacg ttgccgaggt tgagagcctt acgcgccaag atacacctcg cgcgtgcgcg
     2161 gatcgtcgac cacctcgctg cgggtgcctt cgacgatgac ctcgccgaaa tgcaggagcg
     2221 tgatgcggtc ggcgaattcg agggcgacgt ccatgtcgtg ctcgatcatg acgatggtga
     2281 cgtcgcgcgg gatcctggcg agcagctggc gcacgtcgcg ccgctcgtcg accgacaggc
     2341 cggcgaaggg ctcgtcgagc agcagcacct tcgggttctg cgccagcgcc atggcgatct
     2401 cgacccgccg ccgctcgccg taggaggtct gcgacagggg ccgggcggcg agatgggcga
     2461 ggccgacgcg cgccagcgcc tcctcggcgc ggatgcggat ctcggcctgc cggtcgagat
     2521 cgaccagcgg gttccagcga aagggggaca ggccgagcaa ggccagcgtc acgttgcgca
     2581 ggatcgtgtc gcgcgggaac agggtgatga tctggtaggt gcgcgccagg ccgagatgcg
     2641 cccgctgccg gctcgccgcg cgcgtgaggt cgcgaccgaa caggcggatg gcgccgctgt
     2701 cgcatttgag ctcgccggtg atcaggttga acagggtcgt cttgcctgcc ccgttcgggc
     2761 cgatgatcag gcgccgctcg ccgggctcga ccgagaagct gacgttgcgc gtgacgcgca
     2821 agcccccgaa ggacttgcag aggtcgtcga cggcgagcgc gttcatgtgc gctctccggg
     2881 cgccggcacg acgggcacgt tgagccggcc gcgccgcatg gcctgccagc ccatccgcca
     2941 caaccgcacc gagccgggca cgagcccttc gggcatgaag gtgatgatcg ccacgaagat
     3001 cacgccgagc accatgttcc agcgctccac atatgcgctg acgatgttct tcatcaccac
     3061 gacgatggcg gcgccggcga tcggcccgag cagcgtcgcg gtgccgccgg agatcaccat
     3121 cagcagcacc tcggccgagg tctgcagcgc caccacctgc gggctgatga actggttgta
     3181 gtagacgaac aggaggccgg cgacggccga ccagaagccg gagaacagga aggcgaggaa
     3241 gcggatcagc cagacgtggt agccgagcgc gttcatgcgg cgcggctggt cgcgcgtgcc
     3301 gcgcaggctc gcgccgaaag gcgagcgcac gagcagcagc atcgacacga ggcaca
//
LOCUS       DATAIQ010001024         1578 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_264758, whole genome shotgun sequence.
ACCESSION   DATAIQ010001024 DATAIQ010000000
VERSION     DATAIQ010001024.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1578)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1578)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1578
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_264758"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..299
                     /locus_tag="VHN20_16820"
     CDS             <1..299
                     /locus_tag="VHN20_16820"
                     /inference="COORDINATES: protein motif:HMM:NF012593.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cation:dicarboxylase symporter family
                     transporter"
                     /protein_id="HEX2727488.1"
                     /translation="GVTVLFLAQLAGVDLTLAQQLMIVYLAVLGSVGTAGVPSGSTPF
                     VVAVLVTIGINPALIAIILGVDRLLDMCRTVVNVVGDLAATVYVAKREGATLEI"
     gene            621..>1578
                     /locus_tag="VHN20_16825"
     CDS             621..>1578
                     /locus_tag="VHN20_16825"
                     /inference="COORDINATES: protein motif:HMM:NF033542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HEX2727489.1"
                     /translation="MLKSTTIIAFDQHAATTVAAVLLPGHRTPALHSLTSDSPTILRF
                     VDRLRRQGAVTCCYEAGPCGFELRRALQARQIPCDVIAPALIPRRPGDRIKTDRRDAG
                     HLAVLYRAGALTAIHIPTEQEEAARDLLRCREDIRADLLRARHRLSKFLLRHGRRFTA
                     TKKAWSKRHDTWLRTQTWPLPALDQTHRAYRRAVDEALARLRDVETELRALLDLDPLR
                     ARVQRLRCFRGIDDLTALTIAAELGDPRRFATAPSTMAFVGLVPSEHSSGTKRAQGGI
                     TKTGNAHLRRVLIESAWHYRHHPFVSATLRARQRGAPADVIAR"
BASE COUNT          273 a          530 c          488 g          287 t
ORIGIN      
        1 aaggggtcac ggtgctgttt cttgcgcagc tcgccggcgt ggacttgacg ctggcgcagc
       61 agttgatgat tgtgtatctc gccgtgctcg gcagcgtcgg aacggccggc gttccgtccg
      121 gttcgacgcc attcgtcgtc gcggtcctcg tgacaatcgg gatcaacccc gcgctcatcg
      181 cgattattct cggcgtcgat cggttgctgg acatgtgccg gacggtcgtg aatgtagtgg
      241 gcgacctggc ggcgacggtg tacgttgcga aacgtgaggg cgcgacgctc gagatttaga
      301 tccagaatct aaaatccaga atctagaatc tggaaatgac actactttgt ctcacgtcat
      361 ctgggacagg tgacaacgta gcggcacgaa tgcgcacaca agcactccgt cgaaatgggg
      421 cgtgccgacc ggccgtcggc gagcagcaca tcggtgcccg cgtccgcgag ggcggccgca
      481 acaccttctc acgcgcgact tggttactct gtttagatct ttagaccata tggaaagacc
      541 gacctcggct ttgcatctca cgcgggttac gctgaccgtg tgagggttca acgcagagcc
      601 gcatacaaag gaggccggtc atgttgaagt ctacaaccat cattgccttc gatcagcacg
      661 ctgcgacgac ggtcgccgcg gtcttgctcc cgggacatcg gacgccggca ctgcactcgc
      721 tgacatccga tagtccgacg atccttcgct tcgttgaccg gctgcgccga cagggcgcgg
      781 tgacctgttg ctacgaagcc ggaccgtgcg gcttcgagct gcgacgggca ctccaggcac
      841 gccagattcc gtgcgacgtc atcgccccgg cgctcatccc acgccgtccc ggtgatcgca
      901 tcaagacgga tcgacgggat gccgggcacc tcgccgtgct ctatcgggcc ggcgccctga
      961 ccgccattca cattccgacc gagcaggaag aggccgcgcg ggatctcctc cgctgtcgtg
     1021 aggacattcg cgccgatctc ctgcgcgcac ggcatcgcct ctcgaagttc ctcctccgcc
     1081 acggccgccg cttcacggcg accaagaagg cctggtccaa acggcatgac acgtggctgc
     1141 ggacccagac gtggccgttg cccgcgttgg atcagaccca tcgcgcttac cggcgggcgg
     1201 tcgatgaagc gctcgcccgg ctgcgtgacg tcgaaacgga gctgcgcgcg ctgctggatc
     1261 tcgacccgct gcgcgcccgc gtccaacgtc tgcggtgctt ccgcggcatc gatgatctga
     1321 cggcactcac cattgccgcc gagctcggcg atccgcgccg ctttgccacc gcgccgagca
     1381 ccatggcgtt cgtcggcctc gtgccgtccg aacactcgag cgggacgaaa cgcgcgcaag
     1441 gcggcatcac caaaaccggg aatgcgcatc tgcgccgcgt gctcatcgaa tccgcatggc
     1501 actatcgtca tcacccattc gtcagcgcga cactgcgcgc ccgccagcgc ggggcaccgg
     1561 ccgacgtcat tgcgcgcg
//
LOCUS       DATAIQ010001025         1563 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_219079, whole genome shotgun sequence.
ACCESSION   DATAIQ010001025 DATAIQ010000000
VERSION     DATAIQ010001025.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1563)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1563)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1563
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_219079"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..344)
                     /locus_tag="VHN20_16830"
     CDS             complement(<1..344)
                     /locus_tag="VHN20_16830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727490.1"
                     /translation="MVRIDVSFIILAALCLLAGLLMGIGMTAAHDFQLAPIHAHLNLV
                     GFVALSIFGLTYRAYPALARSRLALPHLVLSGVGAIIFPAGVYIAVVHQLPVFAIVGS
                     LIVLGGVATFLA"
     gene            595..>1563
                     /gene="ilvC"
                     /locus_tag="VHN20_16835"
     CDS             595..>1563
                     /gene="ilvC"
                     /locus_tag="VHN20_16835"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018044187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HEX2727491.1"
                     /translation="MRVYYDRDADINLVKGKKVAVVGYGSQGHAHTLNLRDSGVKNVA
                     VALRKGSPSAKKAEGEKLPVMEVAEAAKWADVIMMLTPDELQADIYREHIQPNIRGGA
                     ALMFAHGLNVHFNLIEPRSDIDVLMVAPKGPGHTVRSEYQRGGGVPCLLAIHQDASGN
                     AHDLGLSYASAIGGGRAGIIETTFKEECETDLFGEQVVLCGGLVELIKGGFETLVEAG
                     YAPEMAYFECLHEVKLIVDLIYEGGIANMNYSISNTAEFGEYVTGPRIINSETKAEMK
                     RVLDDIQSGKFTRDWMLENRVNQTSFKATRARMASHPIEEVGERLRG"
BASE COUNT          306 a          496 c          524 g          237 t
ORIGIN      
        1 ttggccagga aggtggcgac gccgccgagc acgatcagcg agccgacgat cgcaaacacc
       61 ggcagctggt gcacgaccgc gatgtagacc ccggccggaa agatgatcgc gccgaccccc
      121 gagagcacga gatggggcag cgccaggcgc gagcgggcga gcgccggata ggcccggtag
      181 gtcagcccga agatcgacag ggcgacgaag ccgacgaggt tcaggtgggc atggatcggc
      241 gccagctgga agtcgtgggc agcggtcatg ccgatcccca tgaggaggcc ggcgagcagg
      301 cacagcgctg ccaggatgat gaacgagacg tcgatgcgaa ccatggtgag atccccccat
      361 atcgaaaagt taaggccggg gccgtgctta ggtgccggct ccgggccggg caatgagaat
      421 cgggtttctc taatatttcc ttgttttcag gactgtttcg ggcggcaaat cagggtagta
      481 accgggggcc gtcgaggcgc ttcccttccc gggcgggcgc cgctaaaagc ggcgcacctt
      541 gcggccgtgc ttcgcccgcc gcgcccacga tttctgtgac aggagtagcc cccaatgcgc
      601 gtctattacg atcgcgacgc cgatatcaac ctcgtcaaag gcaagaaggt cgccgtcgtc
      661 ggctatggca gccagggaca cgcccacacg ctcaacctgc gtgattcggg ggtcaagaac
      721 gtcgccgtgg ccctgcgcaa gggatcgcca tcggccaaaa aggcggaagg cgagaagctg
      781 ccggtgatgg aagtcgccga ggcggcgaaa tgggccgacg tcatcatgat gctgacgccg
      841 gacgagctgc aggcggacat ctaccgcgag cacatccagc cgaacatccg cggcggcgcc
      901 gcgctcatgt tcgcgcatgg cctcaacgtg catttcaacc tgatcgagcc gcgctccgac
      961 atcgacgtgc tgatggtcgc gccgaagggc ccgggccaca ccgtccgctc cgagtatcag
     1021 cgcggcggcg gtgtgccgtg cctcctcgcc atccaccagg acgcgtccgg caacgcccat
     1081 gatctcggct tgtcctatgc ctccgccatc ggcggcggcc gcgccggcat catcgagacg
     1141 accttcaagg aagagtgcga gaccgacctg ttcggcgagc aggtcgtgct gtgcggcggc
     1201 ctcgtcgagc tgatcaaggg cggcttcgag acgctggtcg aggccggcta cgcgcccgag
     1261 atggcgtatt tcgagtgcct gcacgaggtg aagctgatcg tcgacctgat ctacgagggc
     1321 ggcatcgcca acatgaacta ctcgatctcg aacaccgccg agttcggcga atacgttacc
     1381 ggcccgcgca tcatcaattc cgagaccaag gccgagatga agcgcgtcct cgacgacatc
     1441 cagtccggta agttcacccg cgactggatg ctggagaacc gcgtcaatca gacctcgttc
     1501 aaggcgacgc gcgcccggat ggcgtcgcac ccgatcgagg aggtcggcga gcgcctgcgc
     1561 ggc
//
LOCUS       DATAIQ010001026         4005 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_165846, whole genome shotgun sequence.
ACCESSION   DATAIQ010001026 DATAIQ010000000
VERSION     DATAIQ010001026.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4005)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4005)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4005
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_165846"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            253..1047
                     /locus_tag="VHN20_16840"
     CDS             253..1047
                     /locus_tag="VHN20_16840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007068722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinoprotein dehydrogenase-associated SoxYZ-like
                     carrier"
                     /protein_id="HEX2727492.1"
                     /translation="MTEVLVRSRRLIGGVMLALMASQGAALASDSEAAWESIRQEIFG
                     ARPIADGASLLELVAPPRAEDAALVPLDLRIRVPDGAAPVKAITLVIDENPAPVAATF
                     AFDDARPAFAVSTRVRVNSYSFVRAVAETSDGRLHMVKAYVKAAGGCSAPATKDPAEA
                     IANLGQMRFRAFAGNEAQVQIRHPNYSGLQMDQVTRLYTPAWFVETITVSQGARPLFR
                     VEGSIGISEDPTFRFSYRPSAEPVTVEARDTNGQVFRQQFPGGPAF"
     gene            complement(1055..1378)
                     /locus_tag="VHN20_16845"
     CDS             complement(1055..1378)
                     /locus_tag="VHN20_16845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019903965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727493.1"
                     /translation="MGLPLGAALAAESDPAADYPTNARADYVFGCMAANGQTRAALER
                     CSCSLDIVASILPYDRYVQAETVLRVRQGVGQQASIFRSTKMFDDIVADLRRAQAEAE
                     IRCFR"
     gene            complement(1580..1786)
                     /locus_tag="VHN20_16850"
     CDS             complement(1580..1786)
                     /locus_tag="VHN20_16850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020091833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727494.1"
                     /translation="MLILLSVCLMASPSTCREERVNWTFEDANFMGCLVHAQGVLAQW
                     QTEHPDWRVQRWRCVARTDVPTDL"
     gene            2209..3312
                     /locus_tag="VHN20_16855"
     CDS             2209..3312
                     /locus_tag="VHN20_16855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX2727495.1"
                     /translation="MVRIGILGRKPPPPPTFAFNAVPEDEGFAGARVAIRENQTTGAF
                     TRQRYELDEAALEDGESPVDAARKLADGGAGLIAVNLPADELLAVADALKDRGAVLFN
                     IAAADDRLRGADCRANVLHVAPSRAMLTDALAQFLAFKRWRKLFLIVGPQAADAAYAV
                     AMRRAARKFGLTVTADKAWEFGPLAQTKGDSPTRADALVFTRGVDYDVAVVADEAGDF
                     GDYVPFRTWDPRPVAGTQGLVATSWHVAHEYWGAAQLQNRFRRAANRPMRPVDYHAWV
                     ALRAIGETVTRIKDADPRAVGRFMLGPGFDLAAFKGVPLSFRPWDLQLRQPVLIMQPM
                     ALVSVAPEAGFLHQRTTLDSLGIDEPESTCRLR"
     gene            3323..>4005
                     /locus_tag="VHN20_16860"
     CDS             3323..>4005
                     /locus_tag="VHN20_16860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent catabolism-associated
                     beta-propeller protein"
                     /protein_id="HEX2727496.1"
                     /translation="MRPFPLRCAALLAIASAVLADPARAYTLYVSNEKDNTISVIDTA
                     TLQVTATWKVGRRPRGVTVSPDGKHLYVCASDDNRVDVLDTATGKVLRSLRSGPDPEL
                     FVLHPSGNPLYIANEDDNQVTVLDVEQNKVVAEVPVGVEPEGMGLSPDGKVLVNTSET
                     TNMAHFIDTATFKVFDNVLVDARPRFAEFSPDGKTLWVSSEVGGTVTVIDPATRKVTR
                     KIEFKIPGVP"
BASE COUNT          621 a         1414 c         1348 g          622 t
ORIGIN      
        1 gactcgagcg cgccgccgtt gagcaggacg ccctgggtct gaatgccgca gccgcccgcg
       61 accgccagga gaatcatcga ccatccgcgc acgttcatgt tgaagccgaa ctatatcccc
      121 gagcggccac gtttgaaagg cgagcgcgcc tcacgagcgc gagacgggca aggcgttccg
      181 cggcgggctc ggcttcgtga attgaccgct tggggccagg gacgataatg cgtcgatgct
      241 tggaggaccg ccgtgaccga ggtcctggtc cggtcccgcc gcctgatcgg cggggtgatg
      301 cttgccttga tggcgtcgca gggcgccgcg ctcgcgtccg acagcgaggc ggcgtgggaa
      361 tcgatccgtc aggagatctt cggtgcacgg ccgatcgcgg acggcgcctc gcttctcgag
      421 ctcgtggcgc cgccgcgggc cgaggatgcg gcgctcgtgc cgctcgacct gcgcatccgc
      481 gtcccggacg gcgccgcgcc ggtcaaggcg atcacgctgg tcatcgacga gaacccggcc
      541 ccggtcgccg ccaccttcgc gttcgacgac gcgcgccctg ccttcgcggt ctcgacgcgc
      601 gtgcgcgtca attcctattc gttcgtgcgc gccgtcgccg agacgagcga cggcaggctg
      661 cacatggtca aggcctacgt gaaggccgcc ggcggctgct cggccccggc gaccaaggac
      721 ccggccgagg cgatcgccaa tctcggccag atgcgttttc gcgcctttgc cgggaacgag
      781 gcccaggtgc agatccgcca tcccaactat tccgggctgc agatggatca ggtgacgcgg
      841 ctctacacgc cggcgtggtt cgtcgagacc atcaccgtca gccagggcgc gcggccgctg
      901 ttccgggtgg aaggcagcat cggcatcagc gaggacccga ccttccgctt cagctaccgg
      961 ccgagcgccg agccggtcac ggtcgaggcg agggatacca acggccaggt cttccgccag
     1021 cagttccccg gcggcccggc gttctgagcc agcgctaccg gaagcagcgg atctcggcct
     1081 cggcctgagc ccggcgcagg tcggcgacga tgtcgtcgaa catcttggtg ctgcggaaga
     1141 tcgaggcctg ctggccgacg ccctggcgga ccctgaggac cgtttccgcc tggacgtagc
     1201 ggtcgtaggg caggatcgag gcgacgatgt cgagcgagca ggagcagcgc tcgagggccg
     1261 cgcgggtctg gccgttcgcc gccatgcacc cgaagacgta atcggcgcgc gcattggtcg
     1321 gataatcggc tgcggggtcg ctttcggccg cgagggccgc acccaggggc aagcccatcg
     1381 ccacgacaac cacggcggcc aacgccagcg ctcgtgcacg catcgcggcg atcctcctgc
     1441 ggcggcgccg gcggcagccg cgtccggaca gcccttgtac ttcggggcgg cgcttcgcgc
     1501 caccgctggc gcgcaacgag gaggttagcg gcgggtcaga gtcgacgcac cgcgcgccgg
     1561 aggggcgccg tgcgggccgt cacagatcgg tggggacgtc ggttcgggca acgcagcgcc
     1621 agcgctgcac gcgccagtcc gggtgctcgg tctgccattg cgcgaggacg ccctgcgcgt
     1681 gcacgaggca gcccatgaag ttcgcgtcct cgaacgtcca gttgacccgt tcttccctgc
     1741 acgtgctcgg tgaagccatg agacagaccg acaaaagaat gagcatgcga aatccctcga
     1801 catcgccgtt cggaggccag tggagctaag agagctggtc gatactgcca aacgcggccc
     1861 ggtgacagtg gttcgggaaa aagttgtgca agtcgttcgc ggtcatgcag cgaattgaag
     1921 cggccatctg gtctcggcaa agcttgtcga ttcgcgcaac ccggcgcggc gcacgcattt
     1981 cctcttgaca agtcttgccg ccggataaca tagattaagc ccgggccggg ccgcgagctt
     2041 ccgcagccgg agccgccgtt gaagctcgtc cacctttgct gctacgctga catgtcgatg
     2101 acgccccgaa accggttcgt tcactccctg acgcgcgcga ccgccgccgg ctgcgcggcc
     2161 ctcctcgctt tgacgtgccc acccgccgcg ccggcgccgg cgcctcaggt ggtgcgcatc
     2221 ggtatcctgg ggcgcaagcc gccgccgccg ccgactttcg ccttcaacgc cgtgccggag
     2281 gatgagggct ttgcgggggc gcgcgtcgcc atacgtgaaa accagaccac cggcgccttc
     2341 acccgacagc gctacgagct cgacgaagcc gccctcgagg acggcgagtc gccggtcgac
     2401 gccgcccgca agctggccga cggcggagcc ggcctgatcg ccgtcaacct gcccgccgac
     2461 gagctgctcg cggtggccga cgcgctcaag gaccgcggcg ccgtgctgtt caacatcgcc
     2521 gccgccgacg accgcctgcg cggcgccgat tgccgcgcca acgtgcttca cgtcgccccg
     2581 agccgggcga tgctcaccga cgctttggcc cagttcctcg cgttcaagcg ctggcgcaag
     2641 ctgtttctga tcgtcggccc gcaagccgcc gacgccgcct atgccgtcgc catgcggcgc
     2701 gcggcgcgca agttcggctt gaccgtcacg gccgacaagg cctgggagtt cggtccgctc
     2761 gcacagacca agggggacag ccccacgcgc gcggacgcgc tcgtcttcac gcgtggcgtc
     2821 gactacgacg tggcggtggt cgccgacgag gcgggcgatt tcggcgacta cgtgccgttc
     2881 cgcacgtggg atccgcgtcc cgtcgccggc acgcaggggc tcgtcgcgac gtcctggcac
     2941 gtcgcccatg aatactgggg cgccgcgcag ctgcagaacc gcttccgccg cgccgccaac
     3001 cgtcccatgc gcccggttga ttaccacgcc tgggtggcgc tccgcgccat tggcgagacc
     3061 gtcacccgga tcaaggacgc cgacccccgc gcggtcggac gcttcatgct cggccccggt
     3121 ttcgatctcg ccgccttcaa gggcgtgcct ctgagcttcc ggccgtggga tttgcaattg
     3181 cggcagccgg tgctgatcat gcagcccatg gcgctcgtgt ccgtcgcacc ggaagccggc
     3241 tttctgcatc agcgcaccac cctcgactcg ctcggcatcg acgagcccga gagcacgtgc
     3301 cgccttcgct gagggagtga ccatgcgccc gttcccgctc cgttgcgccg cgctgctggc
     3361 gatcgcgtcc gccgttctcg ccgacccggc tcgcgcctac acgctgtatg tctcgaacga
     3421 gaaggacaac accatctccg tgatcgacac cgcgacgctg caggtgaccg ccacctggaa
     3481 ggtcgggcgg cggccgcgcg gcgtcacggt ctcgcccgac ggcaagcacc tttacgtctg
     3541 cgccagcgac gacaaccgcg tcgacgtgct cgacaccgcg accggaaagg tgctgcgctc
     3601 gctgcggtcc ggccccgacc cggagctgtt cgttctccac ccatcgggaa accctttgta
     3661 catcgccaac gaggacgata accaggtcac ggtgctcgat gtcgagcaga acaaggttgt
     3721 ggccgaggtg ccggtcggcg tcgagccgga gggcatgggc ctgagcccgg acggcaaggt
     3781 gctcgtcaac acctccgaga ccaccaacat ggcccatttc atcgacaccg cgaccttcaa
     3841 ggtgttcgac aacgtgctcg tcgacgcgcg gccgcgcttt gccgagttct cgcccgacgg
     3901 caagacgttg tgggtatcgt ccgaggtggg cggcacggtt acggtgatcg atcccgcaac
     3961 gcgcaaagtg acacgcaaga tcgagttcaa gattccgggc gtgcc
//
LOCUS       DATAIQ010001027         1842 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_264989, whole genome shotgun sequence.
ACCESSION   DATAIQ010001027 DATAIQ010000000
VERSION     DATAIQ010001027.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1842)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1842)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1842
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_264989"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            91..1470
                     /locus_tag="VHN20_16865"
     CDS             91..1470
                     /locus_tag="VHN20_16865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018272929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine synthetase"
                     /protein_id="HEX2727497.1"
                     /translation="MSAEQTVIRIKSAEEARRLVHANGHANVKVGLADIDGVLRGKYL
                     SREKFLSALEKGFGFCDVIVGWDSNDQLYDNVTYTGWHTAYPDAPVRILAETGRALPF
                     EDGMPFFLCELAGEAEAICPRGVLRRVLRKAEDMGAAVAAAFEYEFFVFDETPDSVRE
                     KGYRDLKPVTPGYFGYSVLRSSVHAEFYRELLDTCRAMDMPLEGLHTETGPGVLEAAI
                     SVDEALRAADKATLFKTFTKVIAQRRGLMATFMAKWSNSWPGQSGHIHLSLQERASGK
                     PLFHDAQGERGMSATMRHFIGGQQQLMPDILAMVASTVNSYSRLIPGFWAPTSATWGV
                     ENRTTALRAIPGSPAAQRVEYRIAAADANPYIALAAALGSGLWGVANKIEPQAPVTGN
                     AYAIAGPERELPRTLWDAAQRLRSSDVARSLFGDAFVDHFAATREWEEREFRKHITDW
                     ELARYFEII"
     gene            complement(1452..>1842)
                     /locus_tag="VHN20_16870"
     CDS             complement(1452..>1842)
                     /locus_tag="VHN20_16870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727498.1"
                     /translation="HLRSTSIPSASPRSVSGNMRGPSTARIICAERVYSQTRGGSGLE
                     GDVVAPRDERVDECRELPRARLDRLALPFLAGAAGARERRGNVAVAGEPPLRIDAAVD
                     RADRPLHVVAVARRGLRCHVPPQMISK"
BASE COUNT          305 a          629 c          634 g          274 t
ORIGIN      
        1 gtcccgggga gagtttgcag ggccttcgaa ttcctctacc aacgagggag ggtgcgatcg
       61 gctcatgaat cgtccacgaa ggggggcggg gtgtcggcag agcaaacggt catacgcatc
      121 aagagcgccg aagaggcgcg tcggctggtc cacgcgaacg gccacgccaa cgtcaaggtc
      181 ggcctcgccg atatcgacgg cgtgctgcgc ggcaagtatc tgtcgcgcga gaaattcctc
      241 tcggcgctcg agaaggggtt cgggttctgc gacgtgatcg tcggctggga ttcgaacgac
      301 cagctgtacg acaacgtcac ctatacgggc tggcacacgg cctatccgga cgcgcccgtg
      361 cgcatcctcg ccgagacggg acgcgcgctg cccttcgagg acggcatgcc gttcttcctg
      421 tgcgagcttg ccggggaggc cgaggcgatc tgcccgcgtg gggtcctgcg acgcgtgctg
      481 cgcaaggccg aagacatggg cgccgccgtc gcggccgcgt tcgaatacga gttcttcgtc
      541 ttcgacgaga cgcccgattc ggtgcgcgag aaaggctacc gcgacctcaa gccggtgacg
      601 ccgggctatt tcggctactc ggtgctgcgc tcgtcggtgc atgccgagtt ctaccgcgag
      661 ctgctcgaca cctgccgcgc catggacatg ccgctcgagg gcctgcatac cgagaccggg
      721 ccgggcgtgc tcgaggcggc catcagcgtc gacgaggcgc tgcgcgccgc cgacaaggcg
      781 acgctgttca agacgttcac gaaggtaatc gcgcagcggc gcgggctgat ggcgaccttc
      841 atggcgaaat ggtcgaacag ctggccgggg caaagcggcc acatccacct gtcgctgcag
      901 gagcgcgcca gcggcaagcc gctctttcat gacgcgcagg gcgagcgcgg catgagcgcc
      961 accatgcgcc atttcatcgg cggccagcag cagctcatgc ccgacatcct cgccatggtg
     1021 gcctcgaccg tgaattcgta ttcgcggctc attcccggct tctgggcgcc caccagcgcc
     1081 acctgggggg ttgagaaccg caccaccgca ttgcgcgcca ttcccggcag cccggccgcg
     1141 caacgggtcg agtaccgcat cgccgccgcc gacgccaacc cgtatatcgc gctggccgcg
     1201 gcgctcggca gcggtctctg gggcgtcgcc aacaagatcg agccgcaagc gcccgtcacg
     1261 ggcaacgcct acgcgatcgc cggcccggag cgcgagctgc cgcgcacctt gtgggacgcg
     1321 gcgcagcggc tcagaagctc cgacgtcgcc cgatccctgt tcggggacgc tttcgtcgat
     1381 cattttgccg cgacccgcga atgggaagaa cgcgagttcc gcaaacacat caccgactgg
     1441 gagctggcgc gctacttcga gatcatctga ggaggcacat gacagcgaag cccgcggcga
     1501 gcgaccgcga cgacgtgcaa aggacgatca gcccggtcga cggccgcgtc tatgcggagc
     1561 ggcggctcgc cggcgacggc gacgttgccg cggcgctcgc gcgcgccggc ggcgcccgcc
     1621 aggaatggaa gcgccagccg gtcgaggcgc gcgcgcggca gctctcggca ttcgtcgacg
     1681 cgttcgtcgc gcggcgcgac gacatcgccc tccaaccccg agccgccgcg cgtctgggaa
     1741 tacacgcgct ccgcgcagat gatcctcgca gtactcgggc cgcgcatgtt cccgctgacg
     1801 ctgcgcgggc tcgccgaggg tatcgaggtg ctgcgcaagt ga
//
LOCUS       DATAIQ010001028         2379 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_357560, whole genome shotgun sequence.
ACCESSION   DATAIQ010001028 DATAIQ010000000
VERSION     DATAIQ010001028.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2379)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2379)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2379
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_357560"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..408
                     /locus_tag="VHN20_16875"
     CDS             <1..408
                     /locus_tag="VHN20_16875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011581879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEX2727499.1"
                     /translation="AVLIASTVDGSTALWTILLFVLIQQIEGNVIFPLAQHRMASMPP
                     ALALFAIVAAGALFGPLGVTLGFPLAVVAFVLVKKLYVRETLGEATEVPGEKETPGAI
                     SEQEGVLSPQGPGSTTNRGALGKLARDTTIDGE"
     gene            complement(333..1127)
                     /locus_tag="VHN20_16880"
     CDS             complement(333..1127)
                     /locus_tag="VHN20_16880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013167102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX2727500.1"
                     /translation="MRRSIFGWCVAALATLAAGVAPARSAGEACPGLVARQRPLVVPA
                     ALATDEVAVSFIGHATFLIESPGGVRAATDYNDYVRPPVTPDVATMNKAHSTHFSHRP
                     DPGIRHVLRGWNPDGGPARHDVQIGDVRVRNVVTNLRDWGGGTEYDGNSIFVFETADL
                     CIAHLGHLHHTLTPEHLKQIGRIDVVLVPVDGSYTLDVDGMIEVLRALNAPLMVPMHY
                     FGQATLQRFLDHVRQHWPVAFHHSPSMVVSRASLPKAPRFVVLPGP"
     gene            1330..>2379
                     /locus_tag="VHN20_16885"
     CDS             1330..>2379
                     /locus_tag="VHN20_16885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014531314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HEX2727501.1"
                     /translation="MTTDQTLAIGIVAAMMALFVWGRFRYDLVAALALIAAVVAGIVP
                     PKEAFKGFSDDIVIIVASALLVSAAVARSGIMEAALRRIAPYATTVRAQVIVLVAAVT
                     MLSAFIKNIGALAMMIPVAMQIARRANVSPSCFLMPMAFGSLLGGIVTLVGTSPNIIV
                     SRVRAELTGQPFAMFDFTPVGLPLACAGVIFLAFAYRLLPVRRGALSLDAALDIKDYI
                     TEARVTEESSIAGHTVAELKQLTDADVAVTGIVRSGDRPATPLPDAQLREDDIVLLKG
                     EPAALEQLVTEANLKLVGDHRTPQTEHPTDEIGVIEAVVGPTSTLVGQSARRLDLFQR
                     FGLNLLAVSRAGERFT"
BASE COUNT          376 a          819 c          776 g          408 t
ORIGIN      
        1 gcggtgctca tcgcctcgac cgtggacggg tcaaccgcgc tgtggacaat cctcttgttc
       61 gtgctcatcc agcagatcga gggcaacgtc atattcccgc tcgcccagca tcgcatggcg
      121 tccatgccgc cggcgctggc gctgttcgcg atcgtcgcag cgggcgccct cttcggcccg
      181 ctcggcgtta ccctcggctt cccactcgcc gtcgtggcat tcgtgctcgt caagaagctc
      241 tacgtgcggg aaaccctggg cgaggcgacg gaggttccgg gcgagaagga aacgccggga
      301 gcgatctctg agcaggaagg cgtcctcagc cctcaagggc cgggcagcac cacgaaccgc
      361 ggcgccttgg gcaagctcgc ccgggacacc accatcgacg gcgagtgatg gaacgcgacc
      421 ggccaatgct gacgcacgtg gtcgagaaag cgctgcagcg tcgcctgccc gaaataatgc
      481 atcgggacca tcagcggggc attgagcgcg cgcaacacct cgatcatgcc gtcgacatcc
      541 agcgtgtagc tgccgtcgac cggaacgagc acgacgtcga tgcgcccgat ctgtttgaga
      601 tgctccggcg tcagcgtgtg gtgcaggtga ccgagatggg caatgcacaa atccgcggtt
      661 tcgaacacga agatcgagtt gccgtcgtat tcagtcccgc cgccccagtc gcgaaggttg
      721 gtcacgacgt tgcgcacccg cacgtccccg atctgcacgt catggcgggc agggccgccg
      781 tccgggttcc agccgcgcag cacgtgccga atgccgggat ccgggcggtg gctgaaatgc
      841 gtcgaatgcg ccttgttcat ggtcgccacg tcgggcgtga cgggtggccg aacgtaatcg
      901 ttgtagtcgg tggcggcgcg gacgccgccg ggactctcaa tcaggaaagt ggcgtgtccg
      961 atgaaagaca cggcgacctc gtccgtggcg agcgctgccg ggacaacaag gggccgctgc
     1021 cgggcaacaa gcccggggca ggcttcgcct gcgcttctgg caggcgcgac cccggcggcc
     1081 agggttgcga gcgccgccac gcaccagccg aagatgcttc gcctcatgcg cgctccctgg
     1141 ttgacgctga gcagtcagct tacgacgcgc cgtccggttc cggcaatcgc cgcggccggg
     1201 cgtgcggcac cgcgcaaaat atcgcgtcgg gcctgcgaaa cccgcgttcc tgctgcccgt
     1261 tctcttggag ccgcagcgaa cccgagggtg tagctggggc gctccctcct gcccctcggt
     1321 aaatcaagca tgaccaccga ccaaaccctg gccatcggga tcgtggcggc gatgatggcg
     1381 ctcttcgtat ggggccggtt ccgctacgac ctggtggccg ccctggcgct cattgccgcc
     1441 gtcgtggcgg gcatcgtgcc gcccaaggag gcgttcaagg gcttctcgga cgacatcgtc
     1501 atcatcgtcg ccagcgcgct cctggtcagc gctgccgtgg cccgttccgg catcatggag
     1561 gcagccctgc gccggatcgc cccttatgcc acgaccgtca gggcccaggt catcgtgctc
     1621 gtcgccgccg tcacgatgct gtcggcgttt atcaagaata tcggcgctct cgccatgatg
     1681 atcccggtcg ccatgcagat cgcacggcgt gcgaatgtgt cgccatcctg cttcctcatg
     1741 ccgatggcgt tcggctcgct tctcggcggc atcgtcaccc tggtcggcac ctcgcccaac
     1801 atcatcgtct cgcgcgtacg cgcggagctg accggccagc cgtttgcgat gttcgatttc
     1861 acgcccgtcg ggctgccatt ggcttgcgca ggcgtgattt tcctggcgtt cgcataccgg
     1921 ctgctgccgg tgcggcgcgg cgccctctcg ctcgatgcgg ctcttgatat caaggattac
     1981 atcaccgaag cgcgcgtgac ggaggagtcc tccatcgccg ggcacaccgt cgccgagctc
     2041 aagcagctca ccgacgcgga cgtcgccgtg accgggatcg tgcgcagcgg cgacaggccg
     2101 gcgacgcctc ttcccgacgc ccagctgcgc gaggatgaca tcgtcctgct gaagggtgaa
     2161 ccggcggcgc tcgaacagct ggtgacggaa gccaacctca agctcgtcgg cgaccatcgc
     2221 accccgcaga cggagcaccc gaccgacgag atcggcgtga tcgaggcggt cgtcggcccc
     2281 acgtcaaccc tcgtcgggca gtcggcacgc cgcctcgacc tctttcagcg cttcgggctg
     2341 aacctcttgg cggtcagccg tgccggcgag cgcttcacc
//
LOCUS       DATAIQ010001029         7755 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_73316, whole genome shotgun sequence.
ACCESSION   DATAIQ010001029 DATAIQ010000000
VERSION     DATAIQ010001029.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 7755)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7755)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7755
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_73316"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1292
                     /locus_tag="VHN20_16890"
     CDS             <1..1292
                     /locus_tag="VHN20_16890"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HEX2727502.1"
                     /translation="TTRRLWNLPERGEISAEQILRSAHPDDVAAVRTAALAARVTGEC
                     HFVFRVRRPDGEARWIRVRGRTEKARGKDHVIGVTFDVTESKQTEDDLRRREREARLR
                     ARELKTLYRNAPIGLALLDRDLKVVRINEALARINGVSADDHIGRYVFDILPDLRPIA
                     EPLLKRVLESGEPATDVEIEGERPQEPGVKRTWIEQFYPIKDDTGEVLGIGVVCEEVT
                     DQRRTERARALLSRELSHRIKNMFAVISSIIRLSSRGNDAVQPFAQTIRGRIEALGRA
                     HDYVRPLEDEQDASVRSGRTLQSLMRAILEPYWDGQRDERIRITGDDAVIGSTAATSL
                     ALAIHELATNAVKYGALSVADGLVDLVCCISGDTLEITWTERGGPPADEPPIREGFGA
                     VLARRSVTSDLGGTLIYDWQQAGVVIRLSASLERLSR"
     gene            complement(1332..2081)
                     /locus_tag="VHN20_16895"
     CDS             complement(1332..2081)
                     /locus_tag="VHN20_16895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012779226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-binding protein"
                     /protein_id="HEX2727503.1"
                     /translation="MSAASVTAGLIVVGDEILSGRTKDKNIGYIAEYLTNIGIDLSEV
                     RVVADREEAIVEAINALRGRYTYVFTTGGIGPTHDDITADCVARAFGVPIDVDPRAVA
                     VMRERYKAEELNEARLRMARIPQGADLVENRISKAPGFRLGNVIVMAGVPAIMQAMLD
                     AVAPTLTAGQRMIAETIDAGGVPEGLYAEGLGQIAQAHDAVSIGSYPAFSGSGFANQI
                     VVRGKDPAAVAAACGAVRELIGRLRAAISNP"
     gene            2196..2966
                     /gene="sfsA"
                     /locus_tag="VHN20_16900"
     CDS             2196..2966
                     /gene="sfsA"
                     /locus_tag="VHN20_16900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010685944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000023 - maltose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA/RNA nuclease SfsA"
                     /protein_id="HEX2727504.1"
                     /translation="MRFSAPLLEGRLVQRYKRFLADVDLPTGERVTAHCANPGAMLGL
                     TAAGNRVLLSRSTNPLRKLAFSWEVVEAEVGGTRQLVGINTSRPNALVAEALAARCLP
                     RFAAYDRVRPEVKYGRNSRVDFLLEAEGQRPCYLEVKNVHFMREAGFAEFPDCIAARS
                     AKHLHELADMAAAGARAVLVYVIQMEAERFDVARDIDPAYDAAFAAALAAGVESYAYM
                     CRVSADEIVIDKEVEIVTPARQRPVRSARTRGSSASSR"
     gene            complement(2923..3738)
                     /locus_tag="VHN20_16905"
     CDS             complement(2923..3738)
                     /locus_tag="VHN20_16905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010685945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FkbM family methyltransferase"
                     /protein_id="HEX2727505.1"
                     /translation="MNETAPFGTFAPTGIVRWVLERTRAMPDSWAGRRLVFVLRRIAV
                     AALTGAPVDIETFRARMRLHPYNNISEKKVLFTPQFFDPDELTVLKGRLREGFTFIDG
                     GSNIGAYALYVASIAGRSARILAIEPDPEIFDRLVYNIGLNPHGTIKAIACALADKPG
                     ELTLFLDPRNRGQSSVKFVGSQAKSIRVPAMTLLELLQRERLERVDAIKLDVEGAEDI
                     ILEPFFRDAPPALLPSLVIVDGSGRQGNLAAMLERNGYRLIAKTRMNLLFERT"
     gene            3883..4713
                     /gene="map"
                     /locus_tag="VHN20_16910"
     CDS             3883..4713
                     /gene="map"
                     /locus_tag="VHN20_16910"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012454058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HEX2727506.1"
                     /translation="MHQDDTAQLERRRHSESPIHGPEAFDGMRRAGRLTAEALDLLVE
                     HVRPGATTELLDKLAFEFAMDHGAYPAPLLYRGYPKAICTSINHVVCHGIPNDKPLRE
                     GDIVNIDVTLILDGWHGDSSRMFLVGEVPRRAARLCDITYEAMMRGIHAVRPGASTND
                     IGAAIQSYAEAERCSVVRDFCGHGLGRVFHDSPTILHYVEPSYDVTLKPGMLFTVEPM
                     INLGRSQVKVLSDGWTAVTRDRSLSAQFEHTVGVTEMGYEIFTLSPKGYHKPPYGIDG
                     "
     gene            4818..5513
                     /gene="radC"
                     /locus_tag="VHN20_16915"
     CDS             4818..5513
                     /gene="radC"
                     /locus_tag="VHN20_16915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011500585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadC"
                     /protein_id="HEX2727507.1"
                     /translation="MSQSDRDEAPHYHGHRDRLRARFMEGGDKALQDYELMELILFRS
                     IPRRDVKPLAKEILRQFGSFAQALAAPPQRLKEIAGIGESVITDLKIVEAVARRMAKD
                     QVDKRHVLSSWDAVLSYCRTAMGFADKEQFRLLFLDKRNGLIADEVQQWGTVDHTPVY
                     PREVVKRALELSATAVILIHNHPSGDPTPSSTDVKMTRDIIEVAKPLGITVHDHIIVG
                     RDGCASLKSLRLI"
     gene            complement(5563..6363)
                     /locus_tag="VHN20_16920"
     CDS             complement(5563..6363)
                     /locus_tag="VHN20_16920"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018700951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sterol desaturase family protein"
                     /protein_id="HEX2727508.1"
                     /translation="MLTILPAEPLIRLGCFASVLAAMALWEAFAPRRPQKIGRAWRWP
                     NNLGVVVVDTIVVRLIFPTAAVGVALLGEERGWGLLNNLGLPAWIEILIAVVVLDLVI
                     YLQHVLFHAVPMLWRLHRMHHADLEFDVTTGVRFHPVEIILSMIIKIGAVTALGAPAL
                     GVLAFEVLLNATSMFNHGNVRLPHAIDRVLRWIVVTPEMHRVHHSIERRETDSNFGFN
                     LPWWDRLFGTYRAEPEAGHENMIIGIPLFRDSKELRLDRMLLQPLRKK"
     gene            6470..7030
                     /locus_tag="VHN20_16925"
     CDS             6470..7030
                     /locus_tag="VHN20_16925"
                     /inference="COORDINATES: protein motif:HMM:NF025173.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="periplasmic heavy metal sensor"
                     /protein_id="HEX2727509.1"
                     /translation="MRIAALLTTVAAGPALAQHQDAPAAPYAGLDRRTVKALSDEQIA
                     DLRAGRGMGLALAAELNGYPGPVHVLEHAEALGLSPDQRTRVRTLHEAMRREAVPLGE
                     RLIEQETDLGSQFAGRTITPAGLDHATVEIGRTQAALRTAHLKYHLAMMDVLTPAQVA
                     RYGELRGYRGTHPASGGHGGHGHQAR"
     gene            complement(7031..7723)
                     /locus_tag="VHN20_16930"
     CDS             complement(7031..7723)
                     /locus_tag="VHN20_16930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011581762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX2727510.1"
                     /translation="MSDIGRAFVLAFDLIAGFERELVGIVLLSLKVSITAALIAFAIG
                     APLGAALAVYRVPGRGALVVIINALLGLPPVVVGLVVYLLVSRSGPLGGLGILFTPAA
                     MILAQTLLSTPIVMALMHRHVEGLWAEYGDVLRADGASRPRAVATLFAIGRAGLVTAF
                     LAAFGRAIAEVGAILIVGGNIRGYTRTMTTAITLETSKGDLPLALGLGVILVLLSLAV
                     SATALALGRWSR"
BASE COUNT         1352 a         2603 c         2581 g         1219 t
ORIGIN      
        1 ccacgacgcg gcgcctctgg aatcttccgg agcggggcga gatctcagcc gagcaaatcc
       61 tgcgcagcgc ccatcccgac gacgttgcgg cggtgcggac cgcagccctt gccgcacggg
      121 tgacggggga atgccacttc gtgtttcgcg tccgccgccc ggacggcgag gcgcgctgga
      181 tccgcgtgcg cgggcgaacc gagaaggcac gaggcaagga ccacgtcatc ggcgtgacct
      241 tcgatgtgac cgaaagcaag cagaccgagg acgacctgcg gcggcgggaa cgcgaggcgc
      301 ggctgcgcgc ccgcgagctc aagacgctct accgtaacgc gccgatcggg ctcgccctcc
      361 tcgaccgcga tcttaaagtc gtgcgcatca acgaggcact ggcccggatc aacggtgttt
      421 ccgccgacga tcatatcggc cgctacgttt tcgatatttt gcccgacctt cggcccatcg
      481 ccgagcccct cctgaagcgg gtgctcgaat ccggcgagcc ggccacggat gtggagatcg
      541 agggcgagcg gccgcaggag cccggcgtca agcgcacctg gatcgagcaa ttctacccga
      601 tcaaggacga taccggcgag gtgctcggga tcggcgtcgt ttgtgaggag gtgaccgacc
      661 agagacgcac ggaacgggcg cgcgcgcttc tcagccggga gttgagccac cgcatcaaga
      721 acatgttcgc ggtgatctcc agcatcattc ggttgtcgtc gcgcggcaac gacgccgtgc
      781 aacccttcgc ccagaccatc cggggccgca tcgaagcgct cggccgcgcc cacgattacg
      841 tgcgcccgct ggaagacgag caagatgcca gcgtccgctc ggggcgcacg ttgcagagcc
      901 tgatgagggc aatcctcgag ccctactggg acggccagag ggacgagcgg atccggatca
      961 ccggcgacga tgccgtgatc ggctcaacgg ccgccacgtc tctcgccctc gccattcatg
     1021 aattggcgac caatgccgtc aaatacggcg ccttgtcagt ggcggacggg ttggtcgacc
     1081 tcgtgtgctg catcagcggc gacaccctcg agatcacctg gaccgagcgc ggcggcccac
     1141 ccgccgacga gccgcccata cgcgaagggt tcggggcggt cctggcccgc cgcagcgtca
     1201 ccagcgacct cggcggaacg ctcatctatg actggcagca agccggcgtc gtcatccggc
     1261 tcagcgcctc gctcgagcgg ctttcccggt aagtgagaga gggcagccga taactgatcc
     1321 ctgatgaccg atcagggatt gctgattgcg gcccgcaacc ggccgatcaa ctcacggacg
     1381 gcgccgcacg cggctgcgac cgcggccggg tctttgccgc gcaccacgat ctggttggcg
     1441 aagccgcttc ccgagaaggc gggataggag ccgatcgaga cggcgtcatg ggcctgcgcg
     1501 atctgtccca gaccttccgc gtaaagccct tccggcacgc cgccggcgtc gatcgtctcg
     1561 gcgatcatgc gctggccggc ggtaagggtc ggcgccacgg cgtcgagcat ggcctgcatg
     1621 atcgccggca cgccggccat gacgatgaca ttgccgaggc ggaagccggg cgccttggaa
     1681 atgcggttct cgacgagatc ggcgccctgc gggatgcgcg ccatgcgcag gcgcgcctcg
     1741 ttgagctcct ccgccttgta gcgctcgcgc atcacggcaa ctgcgcgcgg atcgacgtcg
     1801 atcggcacgc cgaacgccct ggccacgcaa tcggcggtga tatcgtcgtg cgtcggccca
     1861 atgccgccag tcgtgaacac gtaagtgtaa cgcccgcgca gggcgttgat cgcctcgacg
     1921 atcgcctcct cgcggtccgc aacgacccgc acctcgctga gatcgatacc gatattggtc
     1981 aggtattcgg caatgtagcc gatgttcttg tccttggtgc gcccggacaa gatctcgtcg
     2041 ccgaccacga tcaggccggc ggtgacggaa gctgcagaca tcgtggtccc cggtcgtgca
     2101 tgagggcggc aaccatcgcg catcagctgc gggttgaacc gccctcccct tccctgctac
     2161 ctgccgccct cttttgaggc aactccgatc gtcttatgcg tttttccgct cctctcctcg
     2221 aaggccgcct cgttcagcgc tacaagcgct ttctcgccga tgtcgatctg ccgacaggcg
     2281 agcgcgtgac cgcgcattgc gccaacccgg gcgcgatgct cgggctcacg gcggccggca
     2341 acagagtgct gctgtcgcgc tccaccaatc cgttgcgcaa gctggccttc tcatgggagg
     2401 tcgtcgaggc ggaggtcggc ggcacccggc agctcgtcgg gatcaacacg tcgcgaccga
     2461 atgccctggt ggcggaagcc ttggcggctc gctgtctgcc ccggttcgcc gcctatgaca
     2521 gggtccggcc ggaagtgaag tatgggcgca acagccgggt cgatttcctg ctcgaagccg
     2581 aaggccagcg gccgtgctat ctcgaggtca agaacgtcca tttcatgcgc gaagcgggct
     2641 tcgcggaatt tcccgactgc atcgcggcgc gcagcgccaa gcatctccac gagcttgccg
     2701 acatggcggc ggccggggcg cgggcggtgc tggtgtacgt gatccagatg gaggccgagc
     2761 ggttcgacgt ggcccgcgac atcgatcccg cctacgacgc cgcgttcgcg gccgcgctcg
     2821 ccgcgggcgt cgaatcctac gcctatatgt gccgcgtatc cgccgacgag atcgtcatcg
     2881 acaaggaggt cgagatcgtc accccagccc gccagcgccc ggtcaggtcc gctcgaacaa
     2941 gaggttcatc cgcgtcttcg cgatgagtcg gtagccattg cgttccagca tcgccgcaag
     3001 gttgccctgg cgtccgcttc cgtcgacgat gacgagcgac ggcaggagcg caggcggggc
     3061 atcgcgaaag aacggctcga ggatgatatc ttcggcgccc tcgacgtcga gcttgatggc
     3121 gtcgacccgt tccaggcgct ccctctggag cagctcgagg agcgtcattg ccgggacgcg
     3181 gatgcttttg gcctgagacc ccacgaactt gacgctcgac tggcccctgt tgcgcgggtc
     3241 gaggaagagc gtcagctcgc cgggcttgtc ggcgagcgca caggcaatcg ccttgatggt
     3301 gccgtgcggg ttgaggccga tattgtagac caaccggtcg aagatttccg ggtccggctc
     3361 gatcgccagg atgcgcgcgg accgtccggc gatcgacgcc acgtaaagcg cataggcgcc
     3421 gatattcgag cccccgtcga tgaaggtgaa cccctccctg agccggccct tgagaaccgt
     3481 cagctcgtcc ggatcgaaga actgcggggt gaacagaacc ttcttttcgc tgatgttgtt
     3541 atagggatga aggcgcatgc gtgcgcggaa ggtctcgatg tcgaccggcg ctcccgtgag
     3601 ggcggcaacg gcgatccggc gcagcacgaa gacgagccgt cgccccgccc agctgtcagg
     3661 catggcgcgt gtgcgctcga gaacccagcg gacgatgccc gtgggcgcaa aagtgccgaa
     3721 aggcgcggtc tcgttcatcg aggattgggc cagggcggag gttccatgga atcgcggcgt
     3781 ggtcatgaca cccttgcaac acccccgcaa cctttaccag cctaatgatc cttgcgcgcc
     3841 gcgcgcctat gcctacattc ggccggcgat caggaccttt tcatgcacca ggacgacact
     3901 gctcaactgg aacgccggcg ccacagcgag agtccgattc atgggcccga ggcgttcgac
     3961 gggatgcgcc gggccggccg cctcacggcg gaggccctgg acctcctggt cgagcacgtc
     4021 cggccgggcg cgacgaccga gctcctggac aagctcgcct tcgagttcgc catggaccat
     4081 ggcgcctacc cggcgccgct gctctatcgc ggctatccga aggcgatctg cacctcgatc
     4141 aaccatgttg tgtgccacgg cattcccaac gacaagcccc tgcgtgaagg cgatatcgtc
     4201 aacatcgatg tgacgctgat cctcgacggc tggcacggcg attccagccg gatgttcttg
     4261 gtcggcgagg tgccgcggcg ggcggcgcgc ctgtgcgaca tcacttacga agccatgatg
     4321 cgcggcatcc acgcggtccg cccgggtgcc tcgaccaacg acatcggcgc cgccatccag
     4381 agctacgccg aagcggagcg ctgctcggtg gtgcgcgatt tctgcggcca tggcctcggc
     4441 cgggtgttcc acgactcgcc gaccatcctg cattacgtcg agccgtccta tgacgtgacg
     4501 ctcaagcccg gcatgctgtt caccgtcgag ccgatgatca atctcggccg ctcgcaggtc
     4561 aaagtcctct ccgacggctg gacggccgtg acgcgcgacc ggtccctttc ggcccagttc
     4621 gagcacaccg tcggcgtgac cgagatggga tacgagatct tcacgctgtc gccgaagggc
     4681 tatcacaagc cgccgtacgg catagacggt tgaacggagc gcccctcccc ctctagtgtt
     4741 gcgcccgggt ctggcctttc cgaccggtgg gcaccgcccg gaatgacaag cccggcccgc
     4801 catgacgagc ggggcacatg agtcagtcgg atcgcgacga ggcaccgcat taccacggtc
     4861 accgcgatcg cctgcgcgcc cgcttcatgg aaggtggcga caaggcgctg caggattacg
     4921 agctcatgga gctgatcctt ttccgctcca tcccgcgccg cgacgtgaag ccgctcgcca
     4981 aggagatcct caggcagttc ggctccttcg cccaggcgct cgccgcccca ccgcagcgcc
     5041 tcaaggagat cgccggcatc ggcgaaagcg tcattaccga cctcaagatc gtcgaggccg
     5101 tggcgcggcg catggccaaa gaccaggtcg acaagcgcca cgtgctgtcg tcgtgggacg
     5161 cggtcctctc ctactgccgc acggccatgg ggttcgccga caaggagcag ttccggttac
     5221 tgttccttga caagcgcaac ggtctgatcg ccgacgaggt gcagcagtgg ggcacggtcg
     5281 accacacgcc ggtctatcca cgcgaggtgg tgaagcgcgc gctcgagctg tcggcgaccg
     5341 cggtcatcct catccacaac cacccgtccg gcgatccgac cccttcctcc actgacgtca
     5401 agatgacccg cgacatcatc gaggtggcga agccgctcgg catcacggtg cacgatcaca
     5461 tcatcgtcgg ccgcgacggc tgcgccagcc tcaagagcct gcggctgatc tgagacgcgt
     5521 tccggcgggc cgcctggtct ccggatttac gaccgccgcg tcttatttct tgcgcagcgg
     5581 ctgcagcagc atgcggtcga gccgaagctc cttcgagtcg cggaacagcg gaatgccgat
     5641 gatcatgttc tcgtggccag cctcgggctc ggcgcgataa gtgccgaaca gccgatccca
     5701 ccagggcagg ttgaagccga aattgctgtc ggtctcgcgg cgctcgatgg aatggtgcac
     5761 gcggtgcatc tccggcgtga cgacgatcca gcgcagcacc cggtcgatgg catgcggcag
     5821 gcgcacgttg ccgtggttga acatcgaggt cgcgttgagc agcacctcga aggcgaggac
     5881 gccgagagcc ggcgcgccaa gggccgtaac ggcgccgatc ttgatgatca tggacaggat
     5941 gatctcgacc gggtggaagc gcacgccggt ggtcacgtcg aattcgagat cggcgtggtg
     6001 catgcggtgc agccgccaca gcatcggcac cgcatgaaac aggacgtgct gcagatagat
     6061 gacgaggtcg agaacgacga ccgcgatcag gatctcgatc cacgccggca ggccgaggtt
     6121 gttgaggagc ccccagccgc gctcctcacc gagcagggcg acgccgacgg ccgcagtcgg
     6181 aaagataagg cgcacgacga tcgtatcgac gacgaccacg ccgaggttgt tgggccagcg
     6241 ccaagcgcgg ccgatcttct gcggccgccg cggcgcgaag gcctcccaca gcgccatggc
     6301 ggcgaggacg ctcgcgaagc aaccgaggcg gatcagaggc tcggctggaa ggattgtgag
     6361 cacggttatg ataatctcgt ctgggcgggg acaccgccgc caggagtttt cgatgttgtt
     6421 ccggacactg ttagcagggt tgaggcgggc cgttgacccc gtgcggccgt tgcgtatcgc
     6481 cgcgctcctc accaccgtcg cagcggggcc ggccctcgca cagcaccaag acgcgccggc
     6541 cgcgccctat gcggggctcg accggcgtac ggtcaaagcg ctttccgacg agcagattgc
     6601 ggacctgcgg gccggccgcg gcatgggcct cgcccttgcc gccgagctca acggctatcc
     6661 cggtcccgtt cacgtcctgg agcacgccga ggcgctggga ctttctcccg accagcggac
     6721 gcgcgtgcgc acactccacg aggcgatgcg aagagaggcg gtgccgctcg gcgaacgctt
     6781 gatcgagcag gagacggacc tcggtagcca gtttgcaggc cgcacgatca cccccgcggg
     6841 cctcgaccac gccaccgtcg agatcggtag gacgcaggcg gcgttgcgca cggcgcacct
     6901 caaataccat ctggcgatga tggacgtgct gacgcccgcg caggtcgcgc gctacggcga
     6961 gctgcgcggc taccgcggca cgcacccggc gtccggcggc catggcggcc acgggcacca
     7021 ggcaaggtaa tcaccgcgac cagcgcccga gggccagcgc ggttgcgctc accgcgaggc
     7081 tgaggagcac caggatgacg ccgaggccga gcgccagcgg caggtcgccc ttgctggtct
     7141 cgagggtgat cgccgtggtc atcgtgcgcg tgtagccgcg gatattgccg ccgacgatca
     7201 ggatggctcc gacttcggcg atggcgcggc cgaaggcggc aagaaacgcc gtcacgaggc
     7261 cggctcggcc gatcgcgaac agggtcgcca ccgcgcgcgg ccgcgaggcg ccgtcggcgc
     7321 gcagcacgtc gccgtattca gcccacaggc cttcgacgtg gcgatgcatg agtgccatga
     7381 cgatcggcgt agacaggagg gtctgcgcca ggatcatagc ggcgggggtg aacaggatgc
     7441 cgagcccgcc gagcggaccc gagcgcgaga cgagcaggta gaccacgagc ccgaccacga
     7501 ccggcggcaa cccgagcagc gcgttgatga tcaccaccaa cgccccgcgc cccggaacgc
     7561 ggtagaccgc aagggcggcg ccgagcggcg cgccgatcgc gaaggcgatc agcgccgcgg
     7621 tgatgctgac cttgagggag agcagcacga tcccgacgag ctcccgttcg aacccggcga
     7681 tcaggtcgaa agccaggacg aaagcgcggc cgatgtcact catgcgacgt tgctcatagg
     7741 atatcgctca tggct
//
LOCUS       DATAIQ010001030         6656 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_357673, whole genome shotgun sequence.
ACCESSION   DATAIQ010001030 DATAIQ010000000
VERSION     DATAIQ010001030.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 6656)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6656)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6656
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_357673"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            325..963
                     /locus_tag="VHN20_16935"
     CDS             325..963
                     /locus_tag="VHN20_16935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012334284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family translocator"
                     /protein_id="HEX2727511.1"
                     /translation="MTFLPDPAVLLAYSVACFVLFITPGPDMSLFLAKTVAGGRRAGM
                     AAMIGAMAGCCVHTLLAALGLSALLAASTTAFTILKIVGALYLLWLAVDAVRHGSALT
                     LRNGGAAREPVWQTFLLGVGINLTNPKVVLFFVTFLPQFVDAADPHASEKLLFLGLYF
                     IAFCAPLAALLILIAERFISLLKSRPRVMRAIDYTFAGLFSAFALRILTQAR"
     gene            complement(938..1471)
                     /locus_tag="VHN20_16940"
     CDS             complement(938..1471)
                     /locus_tag="VHN20_16940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015930993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727512.1"
                     /translation="MRLLGRVLLLLFGLLLAIPTGLSVLLVAILFEPKAQHLLGALGL
                     AGFEAVYSELWRGGAPEAVAADLLVGAWAVSTTILLLPPAVVAVVGEAVGTRSFVWYG
                     FACAALTAALPWLARANGPLREHGAVAAEGRLTALLFLSGAASGLMYWLVAGRSAGPK
                     KPPSAGAVRLNAPASGS"
     gene            complement(1468..2781)
                     /gene="rlmN"
                     /locus_tag="VHN20_16945"
     CDS             complement(1468..2781)
                     /gene="rlmN"
                     /locus_tag="VHN20_16945"
                     /EC_number="2.1.1.192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012253225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:0016433 - rRNA (adenine) methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HEX2727513.1"
                     /translation="MAAASLDIARLNADAVPAALGEAARADGIEKTAELSVRAGQALG
                     RPSLVGLTRDELKAKLAEIGVPERELKMRAAQLWHWIYFRGIAGFDEMSNVGKGLRQA
                     LAAAFTLERPQVVSEQVSKDGTRKWLLRLAPTGPLDKGAEIECVYIPEVDRGTLCVSS
                     QVGCTLSCSFCHTGTQRLVRNLTSAEIAAQLIVARDRLGDWTGRTSPEGAFVPSDGGR
                     FVSNIVFMGMGEPLYNIDSVTAAIGVLSDNEGLGLSRRRITVSTSGVVPQMERLGSEA
                     NSMLAISLHAVRDELRNVLVPLNKKYPIKDLLAACRAYPGLSNARRITFEYVMLKGVN
                     DSDADARELVRLLKGIPAKINLIPFNPWPGTKYECSDWERIERFSEIVFRAGYASPVR
                     TPRGRDILAACGQLKSETEKLRARARLMLESGIGAEGVYAVGDDA"
     gene            complement(3005..3640)
                     /locus_tag="VHN20_16950"
     CDS             complement(3005..3640)
                     /locus_tag="VHN20_16950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013167524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="invasion associated locus B family protein"
                     /protein_id="HEX2727514.1"
                     /translation="MLSGPALAQQSTQQTRGGTTAQKPQQTQSGQRNDAKGGQQKPGN
                     AAQQKPGNAAQAKPGGASGGSSQPTLVASFQDWGAHVSGQGRSKVCYAVSEPKDRQPK
                     DLKRDPAYLFVSFRPTEKMKQEVAVRMGFATNEARQAEVSIGQATYALLTKGTDAWIK
                     DQSEESRLVADMLKGQALTVKATSGRGNATADRYSLSGFSQAWERVRKECQ"
     gene            complement(3824..4180)
                     /locus_tag="VHN20_16955"
     CDS             complement(3824..4180)
                     /locus_tag="VHN20_16955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YkvA family protein"
                     /protein_id="HEX2727515.1"
                     /translation="MDAMRHSTSEEAPDGDGGLQHAFWAKVKRFGRELPFIEDLLAAY
                     FCMVDAATPRRVKLILVGAIAYFVLPTDAVPDLLPFLGFADDAAMLAAAITQVAGAIT
                     DAHREKARATLASGEG"
     gene            complement(4332..4628)
                     /locus_tag="VHN20_16960"
     CDS             complement(4332..4628)
                     /locus_tag="VHN20_16960"
                     /EC_number="4.2.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008136753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4a-hydroxytetrahydrobiopterin dehydratase"
                     /protein_id="HEX2727516.1"
                     /translation="MAKLTDAERAELLPALQGWSMVEGRDAIHKRFTFENFNEAFGWM
                     CRVALVAEKLDHHPEWCNVYRTVDVTLSTHDAGGLTRRDVELARTMNRMALSAA"
     gene            complement(4659..5195)
                     /gene="thpR"
                     /locus_tag="VHN20_16965"
     CDS             complement(4659..5195)
                     /gene="thpR"
                     /locus_tag="VHN20_16965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008664 - 2'-5'-RNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA 2',3'-cyclic phosphodiesterase"
                     /protein_id="HEX2727517.1"
                     /translation="MPRLFTGLEIPADVGLELSHYRGGLPGARWVDPENYHITLRFIG
                     DIDDALARDVFSALEDRRHRDPVTVTLDRLETFGGDRPRAVFARAVPTAELQELQAEQ
                     ERLIRRVGLPPEKRKFTPHVTLARLRDASPIDVAGYIATRGHFPRLTFTADQFVLYSA
                     RESVGGGPYVVEAAYPLT"
     gene            complement(5425..6084)
                     /locus_tag="VHN20_16970"
     CDS             complement(5425..6084)
                     /locus_tag="VHN20_16970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014439016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arylesterase"
                     /protein_id="HEX2727518.1"
                     /translation="MARQHGLFGIKAFVVLVGLAAATPGSGVAAPSDRTLRIVALGDS
                     LTAGFGLPQSAAFPAVLERALKARGHQVEIVNAGVSGDTATGGLDRLDWSVPDGTDAV
                     ILELGANDMLRGVDPAATRQALETIVTRLKARGIRVMLAGMYATRNLGPGYVQRFDAI
                     YREIASEHGLVLYPFFLEGIAGQRQLNLPDGLHPTAQGVEKIVERILPSVESFLKQLS
                     Q"
     gene            6178..>6656
                     /locus_tag="VHN20_16975"
     CDS             6178..>6656
                     /locus_tag="VHN20_16975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015824152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX2727519.1"
                     /translation="MTDKAIALQNVDLSLGRGAARVHILKGVSLSIDRGEAVGLVGPS
                     GSGKSTLLMTMAGLEQPDSGRVVVDGTDLSRLDEDALARFRGRRIGIVFQSFHLVPTM
                     TALENVALPLELADEADAFVRAEQELRAVGLGGRLNHYPSQLSGGEQQRVAIARALVA
                     "
BASE COUNT         1093 a         2241 c         2238 g         1084 t
ORIGIN      
        1 accatcccgc gaccggcgac ggcgggcagg aggcgggctg catcggacag aattgcctgg
       61 cccccttgcg gcgagccggg cggcgcgcct tgcgccaggg ccccgcaagg cccgaaggcg
      121 aggacggatg cggcacatac gacgagaggc aggcgatagg ggcgcatggg agcagatcct
      181 gcagggaagg cccatcgtgc cccgatttat gccggcaccc aagcgcaaac cgtggggcgg
      241 caaagtgccg ggggcgttgc gcgacgatcg ggtggcgcga aagcgacgcc tgcggcattg
      301 tcgaaccggt tgccgagacc atcgatgacg ttccttcccg accctgccgt gctgctcgcc
      361 tattccgtgg cctgcttcgt gctgttcatc acgcccggcc cggacatgag tctctttctc
      421 gccaagaccg tcgcgggcgg gcggcgcgcc ggcatggcgg cgatgatcgg ggccatggcc
      481 ggatgctgcg tgcatacgct gctcgcggcg ctcggcctct ctgccctgct ggccgcatcg
      541 acgaccgcgt tcaccatcct gaaaatcgtc ggggcgctct atctgctgtg gctggcggtc
      601 gatgccgtac gccacggctc ggccttgacc ctgaggaacg ggggcgccgc ccgggagccc
      661 gtgtggcaaa cctttctgct cggcgtcggc atcaacctga ccaacccgaa ggtcgtcttg
      721 ttcttcgtga ccttcctgcc gcaattcgtc gacgcggccg acccgcatgc ctccgaaaaa
      781 ctgctattcc tcggcctcta tttcatcgcc ttctgcgcgc cgctggcggc gctgctgatc
      841 ctcatcgccg aacgcttcat cagcctcctg aagagccgcc cgcgcgtgat gcgcgccatc
      901 gactacacct tcgcaggcct gttcagcgcg ttcgcgctca ggatcctgac gcaggcgcgt
      961 taaggcgaac cgcgccagca gaagggggct ttttcggccc cgcgcttctt cccgccacga
     1021 gccaatacat cagcccgctg gccgctcccg aaagaaacag caacgcggtc aagcgccctt
     1081 cggccgccac cgcgccatgc tcgcgcaacg gcccgttcgc ccgcgcgagc cagggcaggg
     1141 cggccgtgag cgccgcgcag gcgaaaccgt accagacgaa ggagcgtgtg ccgacggcct
     1201 cgccgacgac ggcaactacg gcgggcggca ggagcaggat cgtcgtcgag acggcccagg
     1261 cgccgacgag caggtccgcg gcgacggcct cgggcgcgcc gccgcgccag agctccgaat
     1321 agaccgcttc gaatccggcg aggcccaagg cgccgagcag atgctgggcc tttggctcga
     1381 acaggattgc gacgagcagg acagagaggc ctgtggggat ggccaacagg agaccgaaga
     1441 gaagaagcag aacgcggccg agcaatctca cgcgtcgtcg ccgaccgcat aaacgccctc
     1501 ggcgccgatg ccgctttcca gcatcaggcg ggcgcgggcg cgcagctttt cggtctcgct
     1561 cttgagctgg ccgcaggcag cgaggatgtc gcgcccgcgc ggggtgcgga cgggcgaggc
     1621 gtagccggcg cggaagacga tctccgaaaa gcgctcgatg cgttcccagt ccgagcattc
     1681 gtatttggtg cccggccacg gattgaacgg gatcaggttg atcttggcgg ggatgccctt
     1741 gagcaggcgc accagctcgc gcgcatcggc gtcggaatcg ttgacgccct tcagcatcac
     1801 gtattcgaag gtgatgcggc gggcgttgga aaggcccgga taggcgcggc acgcggcgag
     1861 caggtccttg atcggatatt tcttgttgag cggcacgagg acgttgcgca gctcgtcgcg
     1921 caccgcgtgc agcgagatgg ccagcatcga gttggcctcg ctcccgaggc gctccatctg
     1981 cggcacgacg ccggaggtcg agaccgtgat gcgccggcgc gacaggccga ggccttcgtt
     2041 gtcgctcagg acaccgatcg cagcggtgac gctgtcgatg ttgtagagcg gctcgcccat
     2101 gcccatgaac acgatgttgg acacgaagcg tccgccgtcc gacggcacga acgcgccttc
     2161 gggcgaggtc cgacccgtcc agtcgccgag gcggtcgcgc gcgacgatca gctgggcggc
     2221 gatctcggcc gaggtcaggt tgcgcacgag gcgctgcgtg cccgtatggc agaacgagca
     2281 gctcagggtg cagccgacct ggctcgagac gcacagcgtg ccgcggtcga cctcggggat
     2341 gtagacgcac tcgatctcgg cgcccttgtc gagcgggccc gtcggcgcca gccgcagcag
     2401 ccatttgcgc gtgccgtcct tcgacacctg ctcggacacg acctgcggcc gctcgagcgt
     2461 gaacgccgcc gccagcgcct ggcgcagccc cttgccgaca ttcgacatct cgtcgaagcc
     2521 ggcgatgccg cggaagtaga tccaatgcca gagctgggcg gcgcgcatct tcagctcgcg
     2581 ctcgggcacg ccgatctcgg cgagcttcgc cttgagctcg tcgcgcgtga gaccgaccag
     2641 cgacgggcgg ccaagcgcct ggccggcgcg cacgctgagc tcggcggtct tctcgatgcc
     2701 gtccgcgcgc gccgcctcgc cgagcgcagc cgggaccgcg tcggcattga gcctggcgat
     2761 gtcgagcgat gccgccgcca tgaattcgag cctcgtttcc gggagtggag gcttcatata
     2821 aggtcagtcg ggccgcaaag ggaggcccat ccggtcaccg gcctgcggac gggcagagga
     2881 acggccgcgg cggttaattt gcggcgctca ggcggtgcgc tgatcagcgc cgggctgggt
     2941 gccgaaagag ggccaaaagc ggataattct caacagcttg gcgcccggat ggcgatcccg
     3001 gcggctattg gcattccttt cgcacgcgtt cccacgcctg cgagaagccg ctgagggaat
     3061 accggtcggc cgtcgcgttg ccgcgcccgg aggtcgcctt cacggtcaag gcctgccctt
     3121 tcagcatatc ggcgacaagc cggctctcct cgctctggtc cttgatccag gcgtcggtcc
     3181 ccttggtcaa aagcgcgtaa gtcgcctgcc cgatcgagac ttccgcctgc ctggcctcgt
     3241 tcgtggcgaa tcccatccgc acagcgacct cctgcttcat cttctcggtc gggcggaacg
     3301 acacgaagag gtaggcagga tcacgcttca gatccttggg ctgccggtcc ttcggctccg
     3361 acacggcata gcaaaccttg gaacggccct gcccggagac gtgagcgccc cagtcctgga
     3421 atgacgcgac gagcgtcggt tgcgacgatc cgccggaggc gccgccgggc ttcgcctgag
     3481 ctgcattgcc gggcttctgc tgcgctgcat tgccgggctt ctgctgcccg cccttggcgt
     3541 cattgcgctg gcccgattgc gtctgctggg gcttctgcgc cgtcgttccg ccgcgcgttt
     3601 gttgcgtcga ctgctgcgcg agagcgggcc cgctgagcat cgccgcgctt gcgaggacgg
     3661 cggcaaggcg aagggaagag gcacgaatca tgacgcaaac ccaatacgca gaaactccag
     3721 catgatctcg tagcgttaac atcgcgctac gaaccagcat gaaaacaggc ctcaggctgc
     3781 cgccgcacgc gagcgcgcgg cgggaactgc ggcgcgagac gcctcagccc tccccgcttg
     3841 cgagcgtggc ccgcgccttc tcgcgatgcg catcggtgat ggccccggcc acctgcgtga
     3901 tcgcggcggc gagcatggcc gcgtcgtcgg cgaaaccgag gaacggcagg agatcgggca
     3961 ccgcatcggt cggcagcacg aaataggcga tcgcgccgac gaggatcagt ttgacccgtc
     4021 tcggcgtcgc ggcgtcgacc atgcagaaat aggccgcgag aaggtcctcg atgaacggca
     4081 gctcgcgtcc gaagcgcttc accttggccc agaacgcgtg ctgcagcccc ccatcgccgt
     4141 ccggcgcctc ctcggaggtg ctgtggcgca tggcgtccat ctccgccttg gtgaacggct
     4201 ttaccaacgt gtcgtccatt ctcggcccgt tgctccccta aactcccgga tcttcagcaa
     4261 aatcgagcag ctggacaatt ctgtggcggc gtcggctccc tggagctccg gtcgggcggg
     4321 ctcgacacgg ctcaggccgc ggaaagggcc atgcggttca tcgtcctggc cagttccacg
     4381 tcgcggcgcg tcagcccgcc tgcgtcatgg gtcgagagcg tcacgtccac ggtgcggtag
     4441 acgttgcacc attccgggtg gtggtcgagc ttttccgcca cgagcgcgac gcggcacatc
     4501 cacccgaatg cctcgttgaa attctcgaag gtgaagcgct tgtggatggc gtcgcgcccc
     4561 tcgaccatcg accatccctg cagcgccggc agcagctcgg cgcgctccgc atcggtcagc
     4621 ttcgccatgc atgcgctctc cagtggccgc tgcacagcct acgtcaacgg ataggcggct
     4681 tccaccacat acggcccgcc gccgaccgat tcccgcgccg aataaagcac gaactggtcg
     4741 gccgtgaagg tcagcctcgg aaaatggccg cgtgtcgcga tgtaacccgc gacatcgatg
     4801 ggagaagcgt cccgcagccg cgccagggtg acgtgcgggg tgaacttgcg cttctcggga
     4861 ggcaggccga cgcgacggat gagccgctcc tgctcggcct gcagctcttg caattccgcc
     4921 gtcggcacgg cgcgcgcgaa caccgcgcgc gggcggtcgc ctccgaaagt ttccaggcgg
     4981 tcgagcgtca ccgtgaccgg gtcgcgatgg cgtcggtcct cgagcgccga gaacacatcg
     5041 cgtgccaacg cgtcgtcgat atcgccgatg aaacgcaggg tgatatggta gttttcggga
     5101 tcgacccagc gcgctcccgg cagcccgccg cgataatgcg aaagctccag gcccacatcg
     5161 gcgggaatct cgagaccggt gaagaggcgt ggcatcggca tccctccagc ctggcgatcc
     5221 tggcgatccg ttcagatcac cccgcgaagt ggttacggct tcgccgaaca aggctcgccc
     5281 acgtgatccc gagatcctgc ggaccgaaag ccaacgatcc gggaacgctc cggtccgagc
     5341 gatcgccgtc tgggattttg tcggcttgag accacggcga caatgctgcc ggagagacga
     5401 ccaacagggc ttttggttcc cggactattg cgaaagctgt ttcaggaagc tttcgacgct
     5461 cggcaggatg cgctcgacga tcttctcgac gccctgcgcg gttggatgaa gcccgtcggg
     5521 aaggttgagc tgacgctgtc cggcgatgcc ttccaggaag aacggataca ggacgaggcc
     5581 gtgctcgctg gcgatctcgc ggtagatggc gtcgaaccgc tggacgtagc cgggtccaag
     5641 gttgcgcgtc gcgtacatgc cggcgagcat cacacggatg ccgcgcgcct tcagccgcgt
     5701 cacgatcgtt tcgagcgcct gcctggtggc ggccggatcg acgccgcgca gcatgtcatt
     5761 ggcgccgagt tcgaggatga ccgcgtcggt cccatccggc accgaccagt cgagccggtc
     5821 gaggccgccc gtggcggtgt cccccgacac gccggcgttg acgatctcga cctgatggcc
     5881 acgggctttg agcgcccgtt cgaggacggc cgggaatgcg gcgctctgcg gcaagccgaa
     5941 gcccgccgtc aggctgtcgc cgagggcgac gatacggagc gtgcggtcgg acggcgcggc
     6001 aacgccgctg ccgggggtcg ccgccgcaag accgaccagc acgacgaatg ccttgatccc
     6061 aaaaaggcca tgttggcgcg ccacgcggac agctccatat gatcttgcgc gaaagaccca
     6121 ggcggccgcg cgtttcatcg atcccagctt catcagccca acatcggttt gcaagatatg
     6181 acggacaagg ccatcgcgct ccaaaatgtc gaccttagcc tgggacgcgg ggccgcgcgg
     6241 gttcacatcc ttaagggtgt atccctgagc atcgatcgag gcgaagcggt gggccttgtc
     6301 gggccatccg ggtctggcaa atcgacgctg ctcatgacca tggcggggct ggagcagccc
     6361 gattccggtc gggtcgtcgt cgacggcacc gatctctcgc ggctagacga ggatgcgctc
     6421 gcacgttttc gcgggcgccg catcggcatc gtgttccagt cgttccatct ggtgcccacg
     6481 atgaccgcgc tggaaaacgt agccttgccg ctcgaactcg ccgacgaagc cgacgcgttc
     6541 gtgcgcgccg agcaggagtt gcgcgccgtc ggcctcggcg ggcgtctcaa ccattatccg
     6601 tcgcagctct cgggcgggga gcagcagcgc gtcgccatcg cgcgcgcgct cgtcgc
//
LOCUS       DATAIQ010001031         1580 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_73345, whole genome shotgun sequence.
ACCESSION   DATAIQ010001031 DATAIQ010000000
VERSION     DATAIQ010001031.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1580)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1580)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1580
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_73345"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(10..1038)
                     /locus_tag="VHN20_16980"
     CDS             complement(10..1038)
                     /locus_tag="VHN20_16980"
                     /inference="COORDINATES: protein motif:HMM:NF016908.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FkbM family methyltransferase"
                     /protein_id="HEX2727520.1"
                     /translation="MELSYAQNLEDYHLAQVFAGQRDGFYIDVGAGHPVADNVSFWFY
                     LQGWRGLVVEPQAALADLYAHVRPRDRAVCGLVGRADGVADFHVVDRLHGFSTMNEAH
                     ARGAAAFGADYRTRQLPVTTLARLCEQHAVERIDFLKVDVEGAEADVLAGADWRRWRP
                     RVVVVEAVTPGSMAESWADWEPLLVQHRYAFAFFDGLNRFYVAEEEPALASRLPRQPT
                     AWDAVPHLYAWGRARDNVEHPDHALARKLTDGFLAALPRLAPDLLLALLTHAEPGALE
                     RGAAPEEARDVARLLFGKLGEAGVSAQVSRPPASVGQAYRDAMQSDLFRAALGRIASC
                     YDGGQIME"
     gene            1125..>1580
                     /locus_tag="VHN20_16985"
     CDS             1125..>1580
                     /locus_tag="VHN20_16985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AmpG family muropeptide MFS transporter"
                     /protein_id="HEX2727521.1"
                     /translation="MSEKIRLGWRDLADTRVALMLAFGYSAGLPLLLVFGTLSAWLRE
                     SGVPVTTIGMFSWLALAYSFKFVWAPLVDAFDVPVLSRLLGRRRAWMIASQILVAVGL
                     VGVSLSDPGANIALTAAFAFVVAFGSATQDVVVDGWRIDAAPTSHQGLMA"
BASE COUNT          248 a          555 c          534 g          243 t
ORIGIN      
        1 gtagcaggcc tactccatga tctggccgcc atcatagcac gaggcgatgc ggccgagggc
       61 ggcccggaac aggtccgact gcatcgcgtc gcggtaggcc tgtccgacgc ttgccggcgg
      121 ccgtgagacc tgcgccgata cgccggcttc cccgagcttg ccgaacagca gccgggcgac
      181 gtcacgcgcc tcctcgggcg ccgcgccccg ctcgagcgcg ccgggctcgg cgtgggtcag
      241 caacgcgagc agaaggtcgg gagcgagccg aggcagggcc gccaaaaaac cgtccgtgag
      301 cttgcgcgcc agcgcatggt cggggtgctc cacgttatcg cgcgcccggc cccaggcgta
      361 gagatgcggg acggcgtccc acgcggtcgg ctggcgcggc aggcgcgaag ccagcgccgg
      421 ctcttcctcg gccacgtaaa agcggttgag cccgtcgaag aaggcaaaag cgtaacggtg
      481 ctgcacgagc agcggctccc agtcggccca cgattcggcc atgctgccgg gcgtgactgc
      541 ctcgacgacg acgacccgcg gccgccagcg ccgccaatcg gcgccggcga gcacgtcggc
      601 ttcggcgcct tcgacgtcga ccttgaggaa gtcgatgcgc tcgaccgcgt gctgctcgca
      661 gagccgagcc agcgtcgtca ccggcagctg ccgcgtgcgg taatccgcgc cgaaggcggc
      721 ggcgccgcga gcatgcgcct cgttcatggt cgagaagccg tgcagccggt cgaccacatg
      781 gaaatccgcc acgccgtcgg cacgcccgac gagcccacaa acggcgcggt cgcgggggcg
      841 cacatgcgca tagagatcgg ccagcgcggc ctgcggttcg accacgagcc cgcgccagcc
      901 ctgcagatag aaccagaacg agacgttgtc ggcgacgggg tggcctgccc ccacatcgat
      961 atagaagccg tcgcgctggc cggcaaaaac ctgcgccaaa tggtaatcct cgaggttctg
     1021 ggcgtaggac aactccatga catcgcctct tttggtggtc actagcctcc aacccgatag
     1081 gcgattttca cggcgcggtc gcgccggata accaaggaga tgccgtgagc gagaagatcc
     1141 gcctcggctg gcgagacctc gccgacaccc gcgtcgccct catgctggct ttcggctatt
     1201 cggcgggcct gcctctgctg ctcgtgttcg gcaccctgtc ggcgtggctg cgcgaatccg
     1261 gcgtgccggt caccaccatc gggatgttca gctggctggc cctcgcctac agcttcaaat
     1321 tcgtatgggc gccactcgtc gacgcctttg acgtcccggt cctgtcacgt ctcctcggcc
     1381 gccggcgcgc ctggatgatc gcatcgcaga tcctcgttgc ggtcggcctc gtcggcgtga
     1441 gcctgtcgga tccgggcgcg aatatcgcgc tcactgcagc gttcgccttt gtcgtcgcct
     1501 tcgggtccgc gacccaggac gtggtcgtcg acggatggcg catcgacgcc gcgccgacgt
     1561 cgcatcaggg gctcatggcg
//
LOCUS       DATAIQ010001032         1618 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_73380, whole genome shotgun sequence.
ACCESSION   DATAIQ010001032 DATAIQ010000000
VERSION     DATAIQ010001032.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1618)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1618)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1618
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_73380"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1618
                     /locus_tag="VHN20_16990"
     CDS             <1..>1618
                     /locus_tag="VHN20_16990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017485848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit B"
                     /protein_id="HEX2727522.1"
                     /translation="DNAIDEALAGHATEVAVTLNPDGSCTVRDNGRGIPTDIHKEEGV
                     SAAEVIMTQLHAGGKFDQNSYKVSGGLHGVGVSVVNALSTWLRLRIYRDGKEHAMEFR
                     HGDPVAPLAVVGDAEGKRGTEVTFLPSPETFSLVEFDYGTLEHRLRELAFLNSGVRIL
                     LNDNRHAERKHVELLYEGGVEAFVRYLDRAKTGLVSKPIIIRAERDGVGVEVALWWND
                     SYHENVLCFTNNIPQRDGGTHLAGFRAALTRQITGYADSSGLTKKEKVSLTGDDCREG
                     LTAVVSVKVPDPKFSSQTKDKLVSSEVRPIVESVLNEHLGHWLEEHPPEARTITGKVI
                     LAAAARDAARKARELITRKGALDIASLPGKLADCQERDPSKSELLIVEGDSAGGSAKQ
                     GRDRAFQAVLPLRGKILNVERARADKMLSSQEIGTLITALGTGIGHDEKNPHRFNPDK
                     LRYHRIIIMTDADVDGSHIRTLLLTFFFRQMPELIDRGHLYIAQPPLYKAARGKSSLY
                     LKDERALEDYLIDAGTEGAVLRLESGFEFGA"
BASE COUNT          287 a          566 c          524 g          241 t
ORIGIN      
        1 gacaatgcga tcgacgaggc cttggccggg cacgccaccg aagtcgcggt gacgctcaat
       61 ccggacggct cctgcacggt gcgcgataac ggccgcggca tcccgaccga catccacaag
      121 gaagagggcg tgtcggcggc cgaagtgatc atgacccagc tgcatgccgg cgggaagttc
      181 gaccagaact cctacaaggt gtccggcggc ctgcacggcg tcggcgtctc ggtggtgaac
      241 gcgctgtcca cgtggctgcg cctgcgcatc taccgcgacg gcaaggagca tgccatggag
      301 ttccgccatg gcgatcccgt ggcgccgctc gcagtggtcg gcgacgccga gggcaagcgc
      361 ggcaccgagg tgacgttcct gccgtcgccg gagacctttt cgctggtcga gttcgactac
      421 ggcacgctcg agcaccgcct gcgcgagctc gccttcctga actccggcgt ccgcatcctc
      481 ctcaacgaca accgccacgc cgagcgcaag cacgtcgagc tgctttacga gggcggcgtc
      541 gaggcgttcg tgcgctatct cgaccgcgcc aagacggggc tcgtcagcaa gccgatcatc
      601 atccgcgccg agcgcgacgg cgtcggcgtc gaggtggcgt tgtggtggaa cgactcgtac
      661 cacgagaacg tgctctgctt caccaacaac atcccgcagc gcgacggcgg cacgcatctc
      721 gccggtttcc gcgccgcgct gacgcggcag atcacgggct acgcggattc ctccggtctc
      781 accaagaagg aaaaggtctc gctcaccggc gacgactgcc gcgaaggcct caccgccgtc
      841 gtctcggtca aggtgccgga cccgaaattc tcgtcgcaga cgaaggacaa gctcgtctcg
      901 tcggaagtgc gtccgatcgt cgagagcgtc ctcaacgagc atctcgggca ttggctcgag
      961 gagcatccgc ccgaagccag gacgatcacc ggcaaggtca tcctggcggc ggcggcgcgc
     1021 gatgccgcgc gcaaggcgcg cgagctgatc acgcgcaagg gcgcgctcga catcgcctcc
     1081 ctgcccggca agctcgccga ctgccaggag cgcgatccgt cgaagtccga gcttctgatc
     1141 gtcgaggggg attccgccgg cggctcggcc aagcaaggcc gcgaccgcgc cttccaggcg
     1201 gtgctgccgc tgcgcggcaa gattctcaac gtcgagcggg cgcgcgccga caagatgctc
     1261 tccagccagg agatcggcac gctgatcacg gcgctcggca ccggcatcgg ccacgacgag
     1321 aagaacccgc accgcttcaa tccggacaag ctgcgctatc accgcatcat catcatgacc
     1381 gacgcggacg tggacggctc gcacatccgc accctgctct tgacgttctt cttccgccag
     1441 atgccggagc tgatcgaccg cgggcacctc tacatcgccc agccgccgct ctacaaagcg
     1501 gcgcggggca agagctcgct ctacctcaag gatgagcggg cgctggaaga ctacctgatc
     1561 gacgccggga ccgaaggcgc cgtcctgcgc cttgagtccg gcttcgagtt cggggctc
//
LOCUS       DATAIQ010001033         2230 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_265814, whole genome shotgun sequence.
ACCESSION   DATAIQ010001033 DATAIQ010000000
VERSION     DATAIQ010001033.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2230)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2230)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2230
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_265814"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..829
                     /locus_tag="VHN20_16995"
     CDS             <1..829
                     /locus_tag="VHN20_16995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011503098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015079 - potassium ion transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="KUP/HAK/KT family potassium transporter"
                     /protein_id="HEX2727523.1"
                     /translation="ILVVFLVVVFKSSSALASAYGIAVTGTMVITTAMAFFVLWKCWR
                     WSAATAALVIAPFLAVDLTFLFANLLKIVEGGWMPLAVGAVLMTVMLTWRRGTRVLAE
                     KTRAEDVPLPAFIEMLRRSTPERVKGVAVFLTGHPDGTPRALLHNLKHNKVLHETNVI
                     LSIVTADQPQVDERERVSVERLTDDFWRMTLRYGFMQKPDVTQALGRARLHGLKIDLM
                     QTSFFLARRALRVAPKSAMRRWQERLFIGLARSANDASRYFNVPTGRVIEVGSQVAV"
     gene            complement(952..1473)
                     /gene="msrB"
                     /locus_tag="VHN20_17000"
     CDS             complement(952..1473)
                     /gene="msrB"
                     /locus_tag="VHN20_17000"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009494667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033743 - peptide-methionine (R)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HEX2727524.1"
                     /translation="MTQPTGPAPGATTAPQRSTSGFDLRPPTRPQAEALAAELTEEER
                     EVLLEHGTEAPFCGVFNTHKGDGAYACRLCGLPLFRSGTKFESGTGWPSFFEPIDRAH
                     IAFVEDRSHGMVRVEIRCARCDGHLGHVFDDGPPPTGHRYCMNSVSLQFVAGDEGLPD
                     KLGRGAPEGQPLG"
     gene            complement(1613..2224)
                     /gene="msrQ"
                     /locus_tag="VHN20_17005"
     CDS             complement(1613..2224)
                     /gene="msrQ"
                     /locus_tag="VHN20_17005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase
                     heme-binding subunit MsrQ"
                     /protein_id="HEX2727525.1"
                     /translation="MTDALRRVPIWLVYVVGLVPAAAYFYLGVTNQLGADPLKVLEKA
                     LGLWALRFLIATLTVTPLRETLGVNLIRFRRALGLLAFYYAALHLTTYLLLDQGLDWP
                     AIWADIVKRPYITIGMAGFLVLVPLAVTSNNASIRRLGAHGWARLHKLVYFAALAGAV
                     HFVMLVKSWPLEPLVYAAIVAALLAYRLFRPMWQPRRSRLARA"
BASE COUNT          351 a          740 c          777 g          362 t
ORIGIN      
        1 gatcctcgtc gtcttcctcg tcgtcgtgtt caagtcctcg agcgccctcg cctcggccta
       61 cggcatcgcc gtcacgggca cgatggtgat cacgaccgcc atggcgtttt tcgttctctg
      121 gaaatgctgg cgctggtccg ccgcgacggc ggccctggtc atcgcgccgt tcctcgcggt
      181 cgacctgacc ttcctgttcg cgaacctgct caagatcgtc gagggcggct ggatgccgct
      241 cgcggtcggc gcggtgctga tgacggtgat gctcacgtgg cgccgtggca cgcgcgttct
      301 tgccgagaag acgcgcgccg aggacgtgcc gctgccggcc ttcatcgaga tgctgcgcag
      361 gagcaccccg gagcgtgtca agggcgtcgc cgtgttcctc accggtcatc ccgacggcac
      421 accgcgtgcg ttgcttcaca acctcaagca caacaaggtg ctgcacgaaa cgaacgtcat
      481 cctcagcatc gtcactgccg accagccgca ggtcgatgag cgcgagcgtg tgtcggtcga
      541 gcggctgacg gacgatttct ggcgcatgac gctgcgctac ggcttcatgc agaagccgga
      601 cgtgacgcag gcccttgggc gcgcgcgcct gcatggcctc aagatcgacc tcatgcagac
      661 ctcgttcttc ctggcacggc gtgccctgcg tgtcgcgccg aagtcagcga tgcgacggtg
      721 gcaggaacgc ctgttcatcg ggctggcgcg ctcggccaac gatgcgagcc ggtatttcaa
      781 tgtcccgacc gggcgggtga tcgaggtggg gtcgcaggtg gccgtgtaac ggtcgttccg
      841 acgagtcaat cacaagctga gggcgactac ccagctgcgg tccttgttgt tccaggcggg
      901 actggcggac ttcctcccgg cggtccctca cctacacgcg ccgccccacg atcagccgag
      961 gggctgtcct tcgggcgcac cgcgtccgag cttgtccggc aagccttcgt ccccggcgac
     1021 gaactgcagc gacaccgagt tcatgcaata gcggtgcccg gtggggggag ggccgtcgtc
     1081 gaacacgtgg cccaggtgcc cgtcgcagcg cgcgcaccgg atctcgacgc gcaccatccc
     1141 gtggctgcga tcttcgacga aggcgatgtg agcgcggtcg atcggctcga agaagctcgg
     1201 ccacccggtt cccgactcga acttcgtgcc cgagcggaac agcggcaatc cgcacaagcg
     1261 gcacgcatac gcgccgtcac ccttgtgcgt gttgaacacg ccgcagaacg gcgcctccgt
     1321 gccgtgctcc agaaggacct cgcgctcttc ctcggtcagc tcggcggcga gggcctcggc
     1381 ctgcggcctg gtcggcggcc tgaggtcgaa gccgctggtg gagcgctgcg gcgccgtcgt
     1441 ggcgccgggc gccggtcctg tgggctgcgt catgttgggc tcctcgatgg atctctttgg
     1501 cgcaagcggc gtcccgtctc acgcgatgaa gctgcggtgc atctcgccgg cacgcctgcg
     1561 taacgcaggc acgttgtctc cggcacgtct gtcgcctgcg gccgcgacgc cttcaggcac
     1621 gggccagccg tgaccgccgc ggctgccaca tggggcggaa gaggcgatag gcgagaagcg
     1681 ccgcgacgat ggccgcgtag acgagcggct ccagcggcca ggatttcacc agcatgacga
     1741 aatgcacggc tcccgcgagc gcggcgaaat agaccagctt gtgaagccgc gcccatccgt
     1801 gcgcgccgag gcgccggatc gaggcgttgt tcgacgtgac ggcgagcggg acgagcacga
     1861 ggaagcccgc catgccgatg gtgatatagg ggcgcttgac gatgtcggcc cagatcgccg
     1921 gccagtcgag tccctggtcg agcagcaggt acgtggtgag gtgcagggcg gcgtagtaga
     1981 aggcgagaag cccgagcgcc cggcggaagc ggatgaggtt gacgccgagc gtctcgcgca
     2041 gcggcgtcac ggtcagcgtc gcgatcagaa accgcaacgc ccacaggccg agcgccttct
     2101 cgagcacctt gagcgggtcg gcgccgagct ggttcgtgac cccgaggtag aaataggcgg
     2161 ccgcaggcac gagcccgacc acgtagacga gccagatggg gacgcggcgc agcgcgtcgg
     2221 tgatcgcgcg
//
LOCUS       DATAIQ010001034         3641 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_73381, whole genome shotgun sequence.
ACCESSION   DATAIQ010001034 DATAIQ010000000
VERSION     DATAIQ010001034.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3641)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3641)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3641
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_73381"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..486
                     /gene="mraW"
                     /locus_tag="VHN20_17010"
     CDS             <1..486
                     /gene="mraW"
                     /locus_tag="VHN20_17010"
                     /EC_number="2.1.1.199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015931922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytosine(1402)-N(4))-methyltransferase"
                     /protein_id="HEX2727526.1"
                     /translation="GRIETTAQLADLVAAFVRSEPGGMHPATRVFQALRIAVNDELGE
                     LARALHGAERVLKPGGRLVVVTFHSLEDRIVKQFLAARSGRGGSSRHVPSVIVAQPTF
                     QVTTKGPVLPGDAEVAANPRARSAKLRAGARTQAPAQGALPSLALLTELPRARSGGGR
                     R"
     gene            483..881
                     /locus_tag="VHN20_17015"
     CDS             483..881
                     /locus_tag="VHN20_17015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727527.1"
                     /translation="MIRLLHIIAICGLIASAGYAYSIKYDALYYAEQVAKLKAKVQKE
                     RDAIAVIKAEWHLLNRPDRLQAAADRHLDLQPLSVQQLARLSDLPSRPQRGDEIARKL
                     EALGALESTATPKDHRPTDLRVSTTRTPAR"
     gene            971..2647
                     /locus_tag="VHN20_17020"
     CDS             971..2647
                     /locus_tag="VHN20_17020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019403412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HEX2727528.1"
                     /translation="MFRLRLDKSTFRLGLVMLLFIGMFAGLGGRLVMLAVAPEQSGFR
                     RATSSAISAARPDIIDRNGETLATDVKTVSVFAEPRNVIDKDEAVELLTAVLPDLNAR
                     ELRERLNTRRGFIWVKREITPRQQAEVHRLGIPGVGFLPENKRVYPNGAAAAHVLGFA
                     NIDNVGIAGMEKYIDSQGLQDLNGAGFAVQAADLKPIQLSIDLRAQHAMRDELARALD
                     KYKAKAAAGTIVDVTTGEVIALVSLPDFDPNNPVDALEKDRINRINVGVYEMGSTFKA
                     ITTAMALDSGRFTINSTFDARSALRYGRFTINDFHGQHRVMTMPEVFIHSSNIGTARM
                     ALGIGVEGHKAFLRKLGQLDRLRTELPESAEPILPPRWGELNTMTIAFGHGLAVAPLQ
                     AVMATAALVNGGQLIPPTFLKRSPEEARKLASQVIKPETSEAMRYVMRLNAERGSATK
                     AQVAGYYVGGKTGTAEKVVGGRYSKNRVLTTFMAISPADKPRYLFLTILDEPQGLPET
                     QGQATSGWNAAPVTGAIVERVAPLLGAPPRFEPPSQPFPLMVRAGAWGTR"
     gene            2674..>3641
                     /locus_tag="VHN20_17025"
     CDS             2674..>3641
                     /locus_tag="VHN20_17025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018045178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Mur ligase family protein"
                     /protein_id="HEX2727529.1"
                     /translation="MTASASMPLGELFPEAQESAFAARPIAGLASDSRKVMAGSAFVA
                     VPGSRLDGSAFIPQAVAAGAVAVVGEGERPAGLDEAVAYVRVPDVRRALALAAARLHP
                     RQPGTIVAVTGTSGKSSVADFARQLFAALGRRSASLGTLGVITSQGAAYGSLTTPDPI
                     ALHQSLDRLAQDGITHLAMEASSHGIDQRRLDGVRLAAAGFTNLGHDHLDYHETMDAY
                     RAAKLRLFETLLGRDATAVVNADGAFAPLFLEAAAVRGLKLMSTGRAGDTIKLVNLQR
                     DGFSQRLSIRLQQPGGDARMLDVKLPLVGAFQAENALLAAGLVLAA"
BASE COUNT          575 a         1309 c         1188 g          569 t
ORIGIN      
        1 ggtcgcatcg agacgactgc gcagcttgct gacctcgttg cagccttcgt caggagcgag
       61 ccgggcggca tgcatccggc aacgcgcgtc ttccaggcct tgcgcatcgc cgtcaacgac
      121 gagctcggcg agcttgccag agcgctgcac ggcgccgaac gcgtgctcaa gccgggcggc
      181 cggctcgtgg tcgtgacctt ccattcgctc gaggacagga tcgtcaagca attcctggct
      241 gcccgcagcg gccgcggggg cagctcccgg cacgtgccat cggtcatcgt cgcccagccg
      301 accttccagg tcacgaccaa ggggcccgtc cttccgggcg acgccgaagt cgcagccaat
      361 ccgcgtgccc gttccgccaa gctgcgcgcc ggcgcgcgca cgcaggcgcc ggcacaaggt
      421 gcgcttccgt cgctggcgct gctcactgag ctgccgcgcg ccagaagcgg aggagggcgg
      481 cgatgatccg ccttctgcac atcatcgcga tctgcggcct gatcgcctcc gcaggctatg
      541 cctattcgat caaatacgac gcgttgtact atgccgagca ggtcgccaag ctgaaggcga
      601 aggtgcagaa ggagcgcgat gccatcgccg tgatcaaggc cgagtggcat ctgctcaacc
      661 ggccggaccg cctgcaggcg gcggccgacc gtcacctcga cctgcagccc ctgtccgtgc
      721 agcagctcgc acgtctgtcc gatcttccca gccgcccgca gcgcggcgac gagatcgcgc
      781 gcaagctcga agcgctcggc gcgctcgagt cgaccgcgac gcccaaggac catcgcccga
      841 ccgatctgcg cgtgtccaca acccgtactc cggcgaggta acggtgcccg ggcagcgatc
      901 ggatgaagag acgcccgcag cttgggccgc tccggcggcg ccccgctcgc ttggcggtgt
      961 cgcgcgcaac atcttccgcc tgcgcctgga caagagcacg ttccggctcg gcctggtcat
     1021 gctcctcttc atcggcatgt tcgcaggtct cggcggacgc ctcgtgatgc ttgccgtcgc
     1081 gcccgagcaa agcgggtttc gccgcgccac ctcgtcggcg atctcggcgg cgcgccccga
     1141 catcatcgac cgcaacggcg agacgctcgc gaccgacgtg aagaccgtct cggtcttcgc
     1201 cgagccgcgc aacgtgattg acaaggatga agcggtcgag ttgctcacgg ccgtgctgcc
     1261 cgacctcaac gcccgcgagc tgcgcgagcg gctgaacacg cgccgcggct tcatctgggt
     1321 caagcgcgag atcacgccgc gccagcaggc ggaggtgcac cgtctcggca tccccggcgt
     1381 cggcttcctg cccgagaaca agcgcgtcta tccgaacggc gccgcggccg cccacgtgct
     1441 cggtttcgcc aatatcgaca atgtcggcat tgccgggatg gagaaataca tcgacagcca
     1501 gggcctgcag gacctcaacg gcgccggttt cgccgtccag gccgctgatc ttaagccgat
     1561 ccagctgtcg atcgacctgc gcgcccagca cgcgatgcgc gacgaactcg ccagggcgct
     1621 cgacaaatac aaggcgaagg cggccgcggg cacgatcgtt gacgtcacca ccggcgaggt
     1681 gatcgcgctc gtgtcgctgc ccgatttcga ccccaacaat ccggtcgatg cgctcgagaa
     1741 ggaccgcatc aaccggatca atgtcggcgt ctacgagatg ggctcgacct tcaaggcgat
     1801 cacgaccgcc atggccctgg attcgggcag gttcaccatc aactcgacct tcgatgcccg
     1861 ctcggcgctg cgctacggcc gcttcaccat caacgatttt cacggccagc accgcgtcat
     1921 gacgatgccc gaggtgttca tccattcatc gaatatcggc accgcgcgca tggccctcgg
     1981 catcggggtg gagggtcaca aggccttcct gcgcaagctc ggccagctcg accggctgcg
     2041 caccgagctg ccggagagcg cggagccgat cctgccgccg cgctggggcg agctcaacac
     2101 catgaccatc gcgttcggcc atggcctcgc cgtggcgccg ctccaggccg tcatggccac
     2161 tgcggccctc gtcaacgggg gtcagctgat cccgccgacc ttcctcaagc gcagccccga
     2221 ggaggctcgc aagctggcca gccaggtgat aaagcccgag accagcgagg ccatgcgcta
     2281 tgtcatgcgt ctcaacgccg agcgcggatc ggccacgaag gctcaggtcg ctggctatta
     2341 tgtcggtggc aagaccggaa cggccgagaa ggtggtcggc ggacgttatt ccaagaaccg
     2401 ggtgctcacg accttcatgg cgatctcgcc tgccgacaag ccgcgctacc tgttcctcac
     2461 catcctggat gagccgcagg gcttgcccga gacgcaaggt caagccacgt ccggctggaa
     2521 tgcggcgccg gtgacgggcg ccatcgtcga acgcgtcgcg cctctgctcg gcgctccgcc
     2581 acgcttcgag ccgcccagcc agcctttccc tctcatggtg cgagccggtg cctggggcac
     2641 gcgatgagcg cgcgccgcat gccggagcct gacatgaccg cctccgcaag catgccgttg
     2701 ggcgagctct tcccggaggc gcaggagagc gccttcgcgg cgcgtccgat cgctggcctc
     2761 gcctcggaca gccgcaaggt gatggcgggc tcggccttcg tcgccgtgcc cggcagcaga
     2821 ctcgacggct ccgccttcat tcctcaggcc gtcgctgccg gcgccgtggc ggtggtgggg
     2881 gagggggagc gcccggcagg gctcgacgag gccgtcgctt atgtgcgcgt gccggacgtg
     2941 cgccgcgcct tggcccttgc ggcggcacgg cttcatccgc gccaacccgg cacgatcgtc
     3001 gccgtcaccg gcacgagcgg caaaagctcg gtggccgatt ttgcccgcca gctcttcgcg
     3061 gcgctcgggc gccgctctgc aagcctcgga accctgggcg tgatcacgtc ccagggcgcg
     3121 gcctatggct cgctcacgac gcccgatccg atcgcgttgc accagtcgct cgaccgtctc
     3181 gcacaggacg ggatcacgca cctggcgatg gaagcatcct cgcacggcat cgaccagcgc
     3241 cggctcgacg gcgtgcgcct cgccgcagcc ggcttcacca atctcggcca tgaccatctc
     3301 gactatcacg agaccatgga cgcgtatcgc gcggccaagc tgcgcctgtt cgagacgctg
     3361 ctcggccggg atgcgacggc ggtcgtcaat gccgacggcg ctttcgcccc gctgtttttg
     3421 gaagcggccg ccgtgcgcgg gctcaagctg atgagcacgg ggcgggccgg cgacaccatc
     3481 aagctggtca atctgcagcg cgacggcttt tcgcaacggc tctcgatccg gctgcagcag
     3541 ccgggcgggg atgcgcgcat gctcgacgtg aagcttccgc tggtcggcgc cttccaggcc
     3601 gagaacgcgc tcctcgccgc cggtctggtg ctggcggccg a
//
LOCUS       DATAIQ010001035         3134 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_265835, whole genome shotgun sequence.
ACCESSION   DATAIQ010001035 DATAIQ010000000
VERSION     DATAIQ010001035.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3134)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3134)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3134
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_265835"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..316
                     /locus_tag="VHN20_17030"
     CDS             <1..316
                     /locus_tag="VHN20_17030"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024898.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX2727530.1"
                     /translation="EVVRPLIRLHRHAPRRWHVHALAVRPEYRRHGLGTRLLRIADAL
                     AFEDGLTETSLTVAEANEPALRLYDREGYREVAREPVATHPRLNISGSWLLMIRPVVA
                     NF"
     gene            380..1819
                     /gene="lpdA"
                     /locus_tag="VHN20_17035"
     CDS             380..1819
                     /gene="lpdA"
                     /locus_tag="VHN20_17035"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009027446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004148 - dihydrolipoyl dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA];
                     GO_process: GO:0051068 - dihydrolipoamide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HEX2727531.1"
                     /translation="MAETYDVIVIGAGPGGYVTAIRAAQLGFKTAVVDREHLGGICLN
                     WGCIPTKALLRSAEIYHYMEHAKDYGLSAEKVGFDTAAIVKRSRGVSERLSTGVGFLL
                     KKNKVEVIWGEAKLEAPGKVTVGAPTRSVQGPAVPAPKGALGPGTYQAKHIIVATGAR
                     PRVLPGIEPDKKLIWTYFEAMVPERMPKSLIVIGSGAIGIEFASFYRTMGAEVTVVEV
                     LPQILPVEDAEIAGLARKRFEKEGIKIFTGAKVTGVEKGADSVTATVDDGKGGIQKIT
                     AERLISAVGVVGNVENLGLEKLGVKIERGTIVTDGVGRTNVPGVYAIGDVAGPPMLAH
                     KAEHEGVICVEAIKGLHPHPMDKNKIPGCTYCNPQVASVGLTEAKAKEQGFDIRVGRF
                     PFVGNGKAIALGEPDGLVKTIFDKKTGQLLGAHMVGAEVTELIQGFVIAMNLETTEEE
                     LIHAVFPHPTLSEMMHESVLDAYGRVIHM"
     gene            1895..2188
                     /locus_tag="VHN20_17040"
     CDS             1895..2188
                     /locus_tag="VHN20_17040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012335582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HEX2727532.1"
                     /translation="MDGTTYGALGQPGVGFFMALIVGALAGWLAEKLTRSDHGLFTNI
                     LMGIIGAVVGNFLLRLLGFGPAIGFWANLIAATIGAVLVITVYRAIRGRRPSY"
     gene            2398..>3134
                     /locus_tag="VHN20_17045"
     CDS             2398..>3134
                     /locus_tag="VHN20_17045"
                     /EC_number="2.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015932875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0016992 - lipoate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009249 - protein lipoylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HEX2727533.1"
                     /translation="MALVLDLLNGDPRPRHPEKAHRPDQPVQRKPDWIRVKAPGSPQW
                     AETNRIVRENNLVTVCEEAGCPNIGECWEKKHATFMIMGDTCTRACAFCNVKTGLPQA
                     LDAAEPEHVATAVAKLGLAHVVVTSVDRDDLADGGARHFADVIGAIRARSPGTTIEVL
                     TPDFLRKDGALEIVVAARPDVFNHNLETVPSKYLTVRPGARYFHSIRLLQRVKEIDPT
                     IFTKSGIMVGLGEERNEVLQLMDDLRSA"
BASE COUNT          540 a         1073 c         1063 g          458 t
ORIGIN      
        1 ggaggtcgtg cgtccgctga tccgcctgca ccgccacgcg ccgcggcgct ggcacgtgca
       61 cgccctcgcc gtgcggcccg aataccggcg ccatggactc ggcacccggc tgctgcgcat
      121 cgccgatgcg ctggcctttg aggacgggct gacggagacg agcctgacgg tcgccgaagc
      181 caacgagccg gccctgcgcc tttacgaccg cgagggctac cgggaggtgg cgcgcgagcc
      241 cgtcgccacg catccgcggt tgaacatcag cggcagctgg cttttgatga tacgccccgt
      301 cgttgccaat ttctgagcag cgatcttcca ggaacgagag agccgggtcc gggcccggac
      361 gcgacaagcg aggacagtca tggccgagac ctacgatgtg atcgtcatcg gcgccgggcc
      421 gggaggctac gtgacggcca tccgggcggc gcagctcggc ttcaagacgg ccgtcgtcga
      481 ccgcgagcat ctcggcggca tctgcctgaa ctggggctgc atcccgacca aggcgctgct
      541 gcgctcggcg gagatctacc actacatgga gcacgccaag gactacggcc tgtcggcgga
      601 gaaggtcggc ttcgacacgg ccgcgatcgt caagcgctcg cgcggcgtct ccgagcggct
      661 cagcaccggc gtcggcttcc tgctcaagaa gaacaaggtc gaggtgatct ggggcgaggc
      721 gaagctcgag gcacccggca aggtcacggt cggcgcgccg acgcggtcgg tgcaggggcc
      781 ggccgtgccg gcgccgaaag gcgcgctcgg gccgggcacc taccaggcca agcacatcat
      841 cgtcgcgacc ggcgcgcggc cgcgcgtgct gcccggcatc gagcccgaca agaagctgat
      901 ctggacctat ttcgaggcga tggtgccgga gcggatgcca aaatcgctga tcgtgatcgg
      961 ctccggcgcg atcggcatcg agttcgcctc gttctaccgc acgatgggcg ccgaggtgac
     1021 ggtcgtcgag gtgctgccgc agatcctgcc ggtcgaggac gcggagatcg ccgggctggc
     1081 gcgcaagcgc ttcgagaagg agggcatcaa gatcttcacg ggcgccaagg tgacgggcgt
     1141 cgagaagggc gccgattccg tgaccgcgac cgtcgacgac ggcaagggcg gcatccagaa
     1201 gatcacggcc gagcgcctga tctccgccgt cggcgtcgtc ggcaacgtcg agaatctcgg
     1261 cctcgagaag ctcggcgtga agatcgagcg cggcaccatc gtgaccgacg gcgtcggccg
     1321 caccaacgtg ccgggcgtct acgccatcgg cgacgtcgcc ggcccgccca tgctggcgca
     1381 caaggccgag cacgaaggcg tgatctgcgt cgaggcgatc aagggcctgc acccgcaccc
     1441 gatggacaag aacaagatcc cgggctgcac ctactgcaac ccgcaagttg cgagcgtcgg
     1501 gctgaccgaa gcaaaggcca aggagcaggg tttcgacatc cgcgtcggcc gcttcccgtt
     1561 cgtcggcaac ggcaaggcga tcgcgctcgg cgagcccgac ggcctcgtca agacgatctt
     1621 cgacaagaag accgggcagc tgctcggcgc ccacatggtc ggcgccgagg tcaccgagct
     1681 gatccagggc ttcgtcatcg ccatgaacct cgagaccacc gaggaagagc tgatccacgc
     1741 ggtgttcccg cacccgacgc tgtcggagat gatgcacgag agcgtgctgg acgcgtatgg
     1801 ccgcgtgatc cacatgtgag ggatctcgtc cgagccctcc tgcaacgaaa ggcgaccttg
     1861 gccgttgtcg tcggcgaacc gctttggagg gaacatggac gggacaacct acggggccct
     1921 gggacagcca ggcgtcggct tcttcatggc gctgattgtc ggcgccctgg cggggtggct
     1981 ggccgaaaag ctgacccggt cggaccacgg acttttcacc aacatcctga tgggcatcat
     2041 cggcgcggtc gtcggcaatt tcctgctgcg cctgctcggc ttcggcccgg ccatcggctt
     2101 ctgggccaac ctgatcgcgg cgacgatcgg cgccgtcctc gtcatcacgg tctaccgggc
     2161 gatccggggt cgccgaccaa gctactagca ggtgaccgga gcggatcggt tcagggcgaa
     2221 ccgcttccgc tccagtcatc ctcgagccgc atgatcctga tcggcgaacc cacttcgccg
     2281 gatcatgctc cggaacgcat gcctgcccgg gccgcaggcg gtttgcgccg gcggccgcga
     2341 gcgcttaatt cactggaaag cggccaggag tagtcctgac gcgctccggt aacccgcatg
     2401 gccctcgttc tcgatcttct caacggcgac ccccgcccgc gccaccccga aaaggcgcat
     2461 cgccccgacc agccggtcca gcgcaagccg gactggatcc gggtcaaggc gcccggctcg
     2521 ccgcaatggg ccgagaccaa ccgcatcgtg cgcgagaaca acctcgtcac ggtgtgcgag
     2581 gaggccggct gcccgaatat cggcgagtgc tgggagaaga agcacgccac cttcatgatc
     2641 atgggcgaca cgtgcacccg cgcctgcgcc ttctgcaacg tcaagaccgg cttgccgcag
     2701 gcgctcgacg ccgccgagcc cgagcacgtg gcgaccgcgg tcgcgaagct cgggctggcg
     2761 catgtggtcg tcacgtcggt cgaccgcgac gacctcgccg acggcggcgc gcggcatttc
     2821 gccgacgtga tcggcgccat ccgcgcgcgc tcgcccggca cgacgatcga ggtcctcacg
     2881 ccggatttcc tgcgcaagga cggcgccctc gagatcgtgg tcgcggcgcg ccccgacgtg
     2941 ttcaaccaca acctcgagac ggtgccgtca aaatacctga ccgtgcggcc gggcgcgcgc
     3001 tacttccact ccatccgcct cctgcagcgc gtgaaggaga tcgacccgac catcttcacc
     3061 aagtcgggca tcatggtcgg cctcggcgag gagcggaacg aggtgctgca gctcatggac
     3121 gacctgcgct cggc
//
LOCUS       DATAIQ010001036         3094 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_265855, whole genome shotgun sequence.
ACCESSION   DATAIQ010001036 DATAIQ010000000
VERSION     DATAIQ010001036.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3094)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3094)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3094
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_265855"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            192..536
                     /locus_tag="VHN20_17050"
     CDS             192..536
                     /locus_tag="VHN20_17050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727534.1"
                     /translation="MLPTIVLVVVVGFLCGLLLLHWLALAFVCGMASVAYALVSPWDW
                     LLLAKWFRLLTAFQMAYLAGLVIQVLAGDARVRKQGGHPAGAGLERGWRGRLVWRISR
                     RRRARREPAARA"
     gene            complement(600..1088)
                     /locus_tag="VHN20_17055"
     CDS             complement(600..1088)
                     /locus_tag="VHN20_17055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003600710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HEX2727535.1"
                     /translation="MTIKVGDRLPKSSFRTMGADGKPAEKTTDDVFKGRKVVLFAVPG
                     AFTPTCHRNHMPGYVAKADEIKAKGVDAIVVTAVNDVFVMDAWTKASGCDGKVEFIAD
                     GNGDFAKAIGLSLDASGNGLGTRSKRYSMIVDDGVVKSLNIEEAPGKAEVSGADNLLK
                     SL"
     gene            complement(1112..1963)
                     /locus_tag="VHN20_17060"
     CDS             complement(1112..1963)
                     /locus_tag="VHN20_17060"
                     /inference="COORDINATES: protein motif:HMM:NF022853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide reductase DsbD
                     domain-containing protein"
                     /protein_id="HEX2727536.1"
                     /translation="MFVPFCLKKLWPLLVLLPLCEGAAAQEASAWSEGHQSRVRLLAG
                     GGDGASRLAGVQLALQPGFKTYWRNPGESGLPPTFDWSKSTNVAAIDVLWPAPTRSED
                     AGGVSYGYSDGVILPLRVRPRDPGQPVTLALKIDYGVCKDICIPAQAELSLVLAKDAA
                     PSTQGVIREALARVPRPQAPGVGGLSVIGAEPMTDGDKRGLTVTVRAAAAPRLFVEAP
                     DNWFLLPAAAPRHVGTGAQAKYVFDVPVLERPRDATGAVELRFTVVAGNEAVETPISI
                     DAARLSR"
     gene            2078..2701
                     /locus_tag="VHN20_17065"
     CDS             2078..2701
                     /locus_tag="VHN20_17065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020093826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgE/AlgH family protein"
                     /protein_id="HEX2727537.1"
                     /translation="METMRTRLTQGGEPMRGFLDGQMLLAMPGMLDERFSRTVIYLCA
                     HSAEGAMGIVVNKPAADLNFSDLLVQLDIIPEAERIRLPQRVGRMQVLMGGPVETSRG
                     FVLHSPDFYLDQSTLPIDERVCLTATIDILRAIAKGEGPRSAILALGYAGWSAGQLES
                     EIQGNGWLNCPADPDLIFSSSLESKYDLALRKLGIDPAMLSTDAGHA"
     gene            complement(2805..>3094)
                     /locus_tag="VHN20_17070"
     CDS             complement(2805..>3094)
                     /locus_tag="VHN20_17070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEX2727538.1"
                     /translation="YSALSYLQRFPFDTIKIDQSFVQQMANGNRPVILRSIIKLAHEL
                     GMEVVAEGAESESDAIELYQMGCEYAQGFAFGEPMSPLQARQLVGAAPEAA"
BASE COUNT          504 a         1013 c         1034 g          543 t
ORIGIN      
        1 gcgattggaa cagcgcggac ggcagcggca ggcgaactgt ttcctgacgg gactggcgac
       61 aattttatcg gtcgccgggg aaagccaagc ggatcaaggg aaagaggctt ttcggaaccg
      121 ccgggaagcc ctgcgagcac gtggccggct gcttgcgagg cggcgcagga gcgtaggtta
      181 aggaggcgca aatgcttccg acaattgttt tagtcgtcgt cgtcgggttt ctttgcggat
      241 tgcttctgct gcattggctg gccctcgcct tcgtgtgcgg aatggcgagc gtcgcgtacg
      301 cccttgtcag cccgtgggat tggctgctgc tggcgaaatg gttcaggctg ctgaccgcat
      361 tccagatggc gtatctggcc gggctggtga tccaagtgct ggccggcgac gcccgggtca
      421 gaaaacaagg cgggcatccc gcaggcgccg ggctggagcg gggatggcgc ggccgtctgg
      481 tttggcggat cagccgccgc cggcgcgctc gtcgcgaacc ggcggctcgg gcatgatccg
      541 acgcagcgct cctgctcccg cgcggtggcg gggacccgtg agccacgccg ttgcggggct
      601 tacagcgact tgagcaggtt gtcggcgccg gagacctcgg ccttgccggg ggcctcttcg
      661 atgttgaggg atttgacgac gccatcatcg acgatcatcg agtagcgctt cgagcgcgtg
      721 ccgagcccgt tgccggaggc gtcgagcgag agcccgatcg ccttggcgaa atcgccgttg
      781 ccgtcggcga tgaattcgac cttgccgtcg cagccgctcg ccttcgtcca ggcgtccatc
      841 acgaacacgt cgttgacggc agtgaccacg atggcatcga cgcccttcgc cttgatctcg
      901 tcggccttgg cgacgtagcc gggcatgtgg ttgcgatggc acgtcggcgt gaatgcgccg
      961 ggcaccgcaa acagcacgac cttgcgaccc ttgaacacgt cgtcggtggt cttttccgcc
     1021 ggtttgccgt cggctcccat ggtccggaac gagctcttgg gcaggcggtc gccaaccttg
     1081 atggtcatat tcaactccct ttttgctgaa gctatcgtga caggcgcgcg gcgtcgatgc
     1141 ttatcggcgt ttcgacagcc tcgttgccgg ccacgaccgt gaagcgcagc tcgacggcac
     1201 cagtggcgtc gcgcgggcgc tccaggaccg gcacgtcaaa cacgtatttg gcctgcgcgc
     1261 cagtccccac gtgccgtggg gcggccgccg gcagcaggaa ccagttgtcg ggcgcttcga
     1321 caaacaggcg tggcgcggcg gccgcgcgca cggtgacggt cagcccgcgc ttgtcgccgt
     1381 ccgtcatcgg ctccgcgccg atgacggaca ggccgccgac tcccggggcc tgcggccgcg
     1441 gcacgcgcgc cagcgcctct ctgatcacgc cttgcgtcga cggcgcggca tctttcgcga
     1501 ggaccaggga cagctcggcc tgcgccggga tgcagatgtc cttgcacacg ccgtagtcga
     1561 tcttgagcgc cagcgtgacc ggctggcccg ggtcgcgcgg ccgtacgcgc agcggaagga
     1621 tcaccccgtc cgaatagccg taggagacgc cgccggcatc ctccgaccgc gtgggcgccg
     1681 gccagagcac gtcgatggcc gccacgttgg tggatttcga ccagtcgaag gtcggcggaa
     1741 gaccggattc cccggggttt cgccaatagg tcttgaagcc gggctgcagc gccagttgca
     1801 ccccggccag gcggctcgcg ccgtcgcccc ctccggcgag gagccgcacg cgggattggt
     1861 ggccttcgct ccacgccgac gcctcctgcg ccgcagcccc ctcacacagg ggcagcagca
     1921 ccagcaaagg ccacaatttt ttgagacaga atggcacgaa catggaactg gaggccggtc
     1981 aggcgcttcc tcctacggtc agcggaatcg gcgggctatc cacgatcccg tgatcggtta
     2041 acggatgcga atggacaagg cccaaatgca aggtagcatg gagactatgc gaaccaggtt
     2101 gacccagggc ggcgagccca tgcgcgggtt cctcgacggg cagatgctcc tcgccatgcc
     2161 gggcatgctg gatgagcggt tttcgcgcac cgtgatctat ctctgcgcgc attcggccga
     2221 aggggccatg ggcattgtcg tcaacaagcc cgccgccgac ctgaactttt cggatctcct
     2281 ggtgcagctc gacatcattc cagaagccga gcgcatccga ctgccgcagc gggtcggccg
     2341 catgcaggtg ctgatgggcg gcccggtcga gacgagccgc ggcttcgtgc tgcattcgcc
     2401 ggatttctat ctcgaccagt cgacgctgcc gatcgacgag cgcgtctgcc ttacggccac
     2461 catcgacatc ctgcgcgcga tcgccaaggg cgaggggccg cgcagcgcca tcctggcgct
     2521 cggctatgcc ggctggtcgg ccggacagct cgaaagcgag atccagggca atggctggct
     2581 caactgcccg gctgatcccg atctgatctt cagctcgtcg ctggaatcga aatacgacct
     2641 cgccttgcgc aagctcggca tcgatccggc gatgctgtcc accgacgccg gacacgcctg
     2701 accctattcc tcccctttcg caaatcgggc attcccgact ggcgcaccta tagggccgga
     2761 ccttcggaac accccagatt cgtcgcgcag ggaggggatg cccgtcacgc ggcctcgggc
     2821 gcggcgccga ccagctgtcg cgcctgcaag ggggacatcg gctcaccgaa tgcgaagccc
     2881 tgcgcgtatt cgcagcccat ctggtagagc tcgatcgcat cggactcgga ctcggcgcct
     2941 tcagcgacca cctccatgcc gagctcgtgc gccagcttga tgattgagcg caggatcacc
     3001 ggtcgattgc cgttcgccat ctgctgcacg aacgactggt cgatcttgat ggtgtcgaac
     3061 ggaaagcgct gcagatacga cagcgccgaa tagc
//
LOCUS       DATAIQ010001037         3517 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_220164, whole genome shotgun sequence.
ACCESSION   DATAIQ010001037 DATAIQ010000000
VERSION     DATAIQ010001037.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3517)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3517)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3517
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_220164"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..615
                     /locus_tag="VHN20_17075"
     CDS             <1..615
                     /locus_tag="VHN20_17075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017486137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HEX2727539.1"
                     /translation="AQLGNTRVANEAREGEVADAQLPALDGVVALPAVAEGSTPAPEP
                     SPQAGGEGDEFPTWPDLVLSDGGKGQLEAARATLAEIGVTDVPLVGIAKGRDRDAGRE
                     TFFLPDRPPIKLPPRDPALYFVQRLRDEAHRFAIGAHRARRKRDMARSPLDEIPGIGP
                     TRKRALLHHFGTVKAIQRAALEDLKKAPGVNAATAQAVYDFFHG"
     gene            812..1414
                     /gene="pgsA"
                     /locus_tag="VHN20_17080"
     CDS             812..1414
                     /gene="pgsA"
                     /locus_tag="VHN20_17080"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008444 -
                     CDP-diacylglycerol-glycerol-3-phosphate
                     3-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HEX2727540.1"
                     /translation="MTLAQPIRRSAALNLPNLLTYARLVAVPAVVALLFWPRDDWMRW
                     AALAIFIAAGVTDYFDGYLARAYAQQSALGRMLDPIADKLLVSASLLMLAADQTVRGW
                     FLWAAIVILCREILVSGLREYLASLKVSVPVSRIAKWKTALQLVAVGFLIAGPAGDKI
                     LPGTTKIGLALLCIAAALTLYTGWDYLKAGLRHMMEEDAA"
     gene            1420..1671
                     /gene="moaD"
                     /locus_tag="VHN20_17085"
     CDS             1420..1671
                     /gene="moaD"
                     /locus_tag="VHN20_17085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020090648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin converting factor subunit 1"
                     /protein_id="HEX2727541.1"
                     /translation="MKLVYFAWVRERIGRQEEMAEVPSGIATVGELVTWLKSRGEQYA
                     YAFENEGVVRAAIDQVHVKPDAPLAGAREIAFFPPMTGG"
     gene            1705..2175
                     /locus_tag="VHN20_17090"
     CDS             1705..2175
                     /locus_tag="VHN20_17090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006331815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein MoaE"
                     /protein_id="HEX2727542.1"
                     /translation="MVPTIHVQRQDFDVADEIAALTGGRTDIGAVVTFSGICRDEAGR
                     LAALELEHYAGMAESEIARVAEEAARRWPLDGVTVIHRHGRILPGENIVLVVTAAAHR
                     GAAFAAAEFLMDYLKTRAPFWKREHPTDGTVGNWVEAAAHDDEAARRWQDKPGP"
     gene            complement(2187..2327)
                     /locus_tag="VHN20_17095"
     CDS             complement(2187..2327)
                     /locus_tag="VHN20_17095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727543.1"
                     /translation="MRQALHRRRPDRGYVGPDRFTFQGSGTGRYGAPVVRTVSVRVNV
                     VP"
     gene            2374..2649
                     /locus_tag="VHN20_17100"
     CDS             2374..2649
                     /locus_tag="VHN20_17100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727544.1"
                     /translation="MRPPLLCIIATLAGALATPAAAEEPRHQLMTDRPAQAQWHGPDC
                     ICRAQGRTFAVGQNACLQTPAGPRVAECGMVLNNTSWRVTELPCPET"
     gene            complement(3070..>3517)
                     /locus_tag="VHN20_17105"
     CDS             complement(3070..>3517)
                     /locus_tag="VHN20_17105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012452786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HEX2727545.1"
                     /translation="AAAWEAHPPLQDYEARHAYAWEYARHRDALPPLLGRLLDDAQGI
                     TAAAYDDARRAAHHARGALDDIFAEFDVLLTFSAPGSAPETLASTGSARFNRLWTLMG
                     NPCVNVPGLAGAKGLPVGVQVIAPFGRDARALLAARFVEEALAAQG"
BASE COUNT          560 a         1226 c         1222 g          509 t
ORIGIN      
        1 gcgcaactcg ggaacacccg agttgcgaat gaggctcggg agggggaagt cgcagacgcg
       61 cagctgcccg cgctcgacgg cgtcgttgct ttgcccgccg tggcagaggg ctcaaccccc
      121 gcccccgaac cctctccgca agcgggaggg gagggcgatg aattcccgac ctggccggac
      181 ctcgtcctga gcgacggcgg caagggccag ctcgaggcag cccgcgcgac gctggccgag
      241 atcggcgtga ccgacgtgcc gctcgtcggc atcgccaagg gccgcgaccg cgacgccggg
      301 cgcgagacct tcttcctgcc cgaccggccg ccgatcaagc tgccgccgcg cgatccggcc
      361 ctctatttcg tgcagcgcct gcgcgacgag gcgcaccgtt tcgcgatcgg cgcccatcgc
      421 gccaggcgca agcgcgacat ggccaggagc ccgctcgacg agatcccggg catcgggccg
      481 acgcgcaagc gcgcgctcct gcaccatttc ggcaccgtga aggcgatcca gcgggccgcc
      541 ctcgaagatt tgaagaaggc gcccggcgtc aacgccgcca cggcgcaggc ggtctatgac
      601 ttcttccacg ggtgactaat ccctctcccc gcctgcgggg agaggccgag cggcgagcgg
      661 cagcgagccg gccgggtgag ggggcgatgc aggatagagg gctaccggat atgccacctc
      721 acccggccgc tatgcgactc gtctggcaag cggggagagg tcgcgccccg ccgcggttga
      781 ccgacccgcc cgccgcgtgc ttcctccggc catgaccctc gcccaaccga tccggcgttc
      841 ggcggccctg aaccttccga acctgctcac ctatgcccgc ctggtggcgg tgccggcggt
      901 cgtggccctc ctgttctggc cgcgcgacga ctggatgcgc tgggcggccc tggcgatttt
      961 catcgccgcc ggcgtgaccg actatttcga cggctacttg gcgcgcgcct acgcccagca
     1021 gtcggcgctc ggccgcatgc tcgatcccat tgccgacaag ctcctggtct cggcgagcct
     1081 gctcatgctt gccgccgacc agaccgtgcg gggctggttc ctgtgggccg ccatcgtcat
     1141 cctgtgccgc gagatcctgg tctcgggcct gcgcgaatat ctggccagcc tgaaggtgag
     1201 cgtgcccgtg agccggatcg ccaagtggaa gaccgcgctg cagctggtcg cggtcggctt
     1261 cctgatcgcc gggccggccg gggacaagat cctgccgggc acgaccaaga tcgggctcgc
     1321 gctcctctgc atcgctgcgg cgctgaccct ctataccggc tgggattacc tgaaggcggg
     1381 actccggcac atgatggaag aggacgccgc gtgatgcagc tgaagctcgt ctatttcgcc
     1441 tgggtgcgcg agcgcatcgg ccggcaggag gagatggccg aggtgccgtc gggcatcgcc
     1501 accgtcggtg agctggtgac gtggctcaag agccgcggcg agcaatatgc ctatgcgttc
     1561 gagaacgaag gcgtcgtgcg cgcggcgatc gaccaggtcc acgtcaagcc cgacgcgccg
     1621 ctcgccgggg cgcgcgagat cgccttcttc ccgccgatga cggggggcta gctgtcgccg
     1681 cacgccgcga cagggatttg cgtcatggtt cccaccattc atgtccagcg ccaggatttc
     1741 gacgtcgccg acgagatcgc cgcgctgacg ggcgggcgga ccgacatcgg cgcggtcgtc
     1801 accttctcgg gcatctgccg cgacgaggcc gggcggctgg cggcgctcga gctcgagcat
     1861 tacgccggca tggccgaaag cgagatcgcg cgcgtggccg aggaggccgc ccggcgctgg
     1921 ccgctcgacg gcgtcaccgt gatccatcgc catggccgca tcctgcccgg cgagaacatc
     1981 gtgctggtcg tcaccgctgc ggcgcatcgc ggcgccgcct tcgcggcggc ggaattcctg
     2041 atggactatc tcaagacgcg cgcgccgttc tggaagcgcg agcacccgac cgacggcacc
     2101 gtcggcaact gggtcgaagc cgcggcgcac gacgacgagg ccgcccggcg ctggcaggac
     2161 aagcccggtc cctgatcggc ggccggctac ggcacgacgt tgacccggac gctgaccgtc
     2221 cgcacgacgg gcgctccgta gcggccggtt cccgagccct ggaaggtgaa gcgatcggga
     2281 ccgacatagc cgcgatcagg acggcgccga tgcaatgctt gacgcatgcg ccggcgagga
     2341 gaaggatggc gcggggctcg acggaggtgt cgcatgcggc cgcccttgct ctgcatcatc
     2401 gccaccctcg cgggagcgct cgcgaccccc gccgcggcgg aagaaccgcg ccatcagctc
     2461 atgaccgacc ggccggcgca ggcgcagtgg cacggccccg attgcatctg ccgcgcgcag
     2521 ggccgcacct tcgcggtcgg ccagaatgcc tgcctgcaga ccccggcggg gccccgcgtc
     2581 gccgaatgcg gcatggtcct caacaacacc tcgtggcgcg tcaccgaact gccgtgtccg
     2641 gaaacgtaat cccttacctt gtcgtggccg ggctttgtgt tcagccccgc cccgcccatg
     2701 acaaagcgtg gtgcgccagc gatgctgctc aacaaaaaac cgccgccgaa agcggcggcg
     2761 gcgatcgtaa tgtaatgccg atcgtccgaa tgtgggaaag gctcagaaaa cgcccgccac
     2821 gatcgcgccc acgaaggcaa gcgccatcac gaaagcggtg acattcaccg tcgaggacca
     2881 atccaacttc gacacatggt ccatgcaagc ctccttgctg cgacctgacg ctaacagagg
     2941 caacgaacct ggagaagcgc ggttccattg tgcgccgcaa gaggaggcag gggaaaaccc
     3001 tggcgcttcc gtccaagccg ttgaaatata gatacaaaaa atattgtaga tggcgtgcgg
     3061 gcggggcctt tagccctgcg cggcaagcgc ctcctcgacg aatcttgccg cgagcagtgc
     3121 gcgtgcgtca cgcccgaacg gggcgatgac ctgcaccccc acgggcaggc ccttggcgcc
     3181 cgcgagcccc ggcacgttga cgcaagggtt gcccatcagc gtccacaggc ggttgaagcg
     3241 cgcgctgccg gtgctggcca gcgtctcggg ggcgctgccg ggggccgaga aggtgagcag
     3301 gacgtcgaat tcggcgaaga tgtcgtcgag cgcgccgcgg gcgtgatggg ccgcccggcg
     3361 ggcgtcgtcg taggcggccg ccgtgatgcc ctgggcgtcg tcgagcagcc tgccgaggag
     3421 cggcggcaag gcgtcgcgat ggcgcgcgta ttcccacgca taggcgtgcc gcgcctcgta
     3481 atcctgcagc ggcgggtggg cctcccaggc tgccgcg
//
LOCUS       DATAIQ010001038         1930 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_358119, whole genome shotgun sequence.
ACCESSION   DATAIQ010001038 DATAIQ010000000
VERSION     DATAIQ010001038.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1930)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1930)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1930
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_358119"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..985
                     /locus_tag="VHN20_17110"
     CDS             <1..985
                     /locus_tag="VHN20_17110"
                     /inference="COORDINATES: protein motif:HMM:NF019351.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="heavy metal-binding domain-containing protein"
                     /protein_id="HEX2727546.1"
                     /translation="DVCFDETGELTLEHRTPDRTYPLAMIRVTDEQVEPSLTPQFEAL
                     RTSADMLAERARIAAHLEADPDKTLAFVAEMDMGEPELPPGATLAYACPMHPEVIGDV
                     PGRCPKCGMALLATATVPIAYACPMHPEVRADQPERCPECGMKLVPAQLVQQPDTAGS
                     HDSNEHDHHHAASETAHTVGGIEWEDDMVAVNRVTTPANTRWKLVDRTTGAEGAGIDW
                     RFRVGDRVKIRLVNEMDSDHPMHHPFHIHGAGRFLILSRDGTPEPNLVWKDTVLVPVG
                     QVVDLLLDVTNPGRWMAHCHIAEHHESGMMLSFNVDPQEATSRSSTHAESD"
     gene            1400..>1930
                     /locus_tag="VHN20_17115"
     CDS             1400..>1930
                     /locus_tag="VHN20_17115"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX2727547.1"
                     /translation="MQSANPRRWAALGLIALAQFMVIMDTSIIGVALPEIRADLGFGA
                     GDLSWVFNAYVIAFGGLLLLGGRLSDLLGARRVFAAGWAILAGASLAASLAETTGVEI
                     AARAAQGAGAALIAPSALTLLMMLFGSNPKELMKAFAIYGAAAPAGGTAGVFLGGVIT
                     EWISWPWVFYINIPIAI"
BASE COUNT          325 a          717 c          594 g          294 t
ORIGIN      
        1 cgacgtctgc ttcgacgaga cgggcgagct gaccctcgag cacaggacgc ccgaccgcac
       61 ctacccgctg gccatgatcc gcgttacgga cgagcaagtc gagccgtctc tcacgcccca
      121 gttcgaggcg ctccggacga gcgccgacat gctcgccgaa cgcgctcgga tcgccgccca
      181 cctcgaggca gatccggaca agacgctcgc gttcgtcgcc gagatggaca tgggcgagcc
      241 ggagctgcca ccgggagcga cgctcgcgta cgcatgcccg atgcacccgg aggtcatcgg
      301 cgatgtaccc ggccgctgcc cgaaatgcgg catggcgcta cttgcgaccg ccaccgtacc
      361 gatcgcctac gcctgcccca tgcatcccga ggtcagagcc gatcagcccg agcggtgccc
      421 ggaatgcggc atgaagctcg tgcccgcgca gcttgtgcaa cagccggaca ccgccggcag
      481 ccacgactca aacgagcacg accaccacca cgcagcttcc gaaactgccc acaccgtggg
      541 cggaatcgag tgggaagacg acatggtcgc cgtcaaccgc gtgaccacgc cggcgaacac
      601 gcgctggaag ctggtcgacc gcacgacagg cgcggaggga gcagggatcg attggcgctt
      661 ccgcgtcggc gatcgggtga agatccgcct cgtcaacgag atggactcgg accatccgat
      721 gcaccacccc ttccacatcc acggcgccgg ccgcttcctc atcctctccc gcgacggaac
      781 cccggagccg aacctcgtct ggaaggacac cgtcctcgtg ccagtgggtc aggtcgtaga
      841 cctcctgctg gacgtcacca accccggccg atggatggcg cactgccaca tcgccgaaca
      901 ccacgagagc ggaatgatgc tcagcttcaa cgtcgacccg caagaagcga cgagcaggag
      961 ttcgacccac gcggagagtg actgacgatg cagcgtatga gccgccgtca gatccgactc
     1021 cttcgggaga ccgtcgcgtt ctcaagcgac gcggcggccg ggatcgcagg ccttcctgag
     1081 cgccgcctac gtcgccctcg gcgccgacat cgtcctgccc gccgcgaaga cgttcccgct
     1141 gaaggtgcga cctcaaagcc cgtccccact gcaagtcgac cgccgagcgg catgcggttc
     1201 gatttcacag tcgagaacga gtgtgggcag ccacatttcc ctaatacccc ccatgggtat
     1261 ggtgtcttcc atgagtcgcg caatgaacct caggcgccgg cgatgcgcca ccgcggcccg
     1321 gcaaccctga gcgctgggcc gcttccggcc ttctgtcttc atcgttgagc cgcgatctgc
     1381 ggctcggaaa ggaccaccca tgcagtccgc aaatccgcgg cgctgggccg cgcttggcct
     1441 gatcgcgctc gcgcagttca tggtgatcat ggacacctcg atcatcggcg tcgcccttcc
     1501 tgagatccgc gcggacctcg gcttcggcgc cggggacctc tcctgggtct tcaacgccta
     1561 cgtcatcgcc ttcggcggcc tgctgctgct cggcggccgc ctctccgacc tgctcggcgc
     1621 gcggcgcgtc ttcgccgccg gctgggccat cctggccggc gcgtcgctgg ccgccagcct
     1681 cgccgagacc accggcgtcg agatcgccgc ccgtgcagca cagggcgccg gcgcggcgct
     1741 gatcgcaccg tccgcgctga cgctcctgat gatgctcttc ggctccaacc cgaaggagct
     1801 catgaaggcc ttcgccatct acggcgccgc cgcgcccgcc ggcggcaccg ccggcgtgtt
     1861 cctcggcggc gtgatcaccg agtggatctc ctggccgtgg gtcttctaca tcaacatccc
     1921 gatcgcgatc
//
LOCUS       DATAIQ010001039         1997 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_358372, whole genome shotgun sequence.
ACCESSION   DATAIQ010001039 DATAIQ010000000
VERSION     DATAIQ010001039.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1997)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1997)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1997
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_358372"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..299)
                     /locus_tag="VHN20_17120"
     CDS             complement(<1..299)
                     /locus_tag="VHN20_17120"
                     /inference="COORDINATES: protein motif:HMM:NF012804.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HEX2727548.1"
                     /translation="MAASLEIPAAASEIVEDLIAANKILYQHKVVDAFGHVSVRHDKD
                     AQKYLMSRYVPPGMVTRDDIVTFDLDSNAIDKTGLRYYSERFIHGEIYKARPDVMA"
     gene            complement(433..1458)
                     /locus_tag="VHN20_17125"
     CDS             complement(433..1458)
                     /locus_tag="VHN20_17125"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEX2727549.1"
                     /translation="MGRTGLARVVAGAVMLAVSAVAVQAEDAAAFYKGKTLRFVVGLG
                     VGGGFDAYARMIAPYLGKELDATVIVENQPGAGGLLALNQIYAAQPDGLRLMIVNGTP
                     AALGQLLGQENIRYDLTKVEHLGVISAYPWVWLVGPKTEFKTVADTMKPGVKVRWGGT
                     GPSDGPADGALVTCEALHVDCSVILGYKSSGDIALAMERGEVDALYVSDSSAANFAKS
                     NNARPLASMSRTRSALLPDVPSVFEQAKLTPEQDWWLDFRANLNDLGRILVTTPGVPA
                     DRLAYLRAAVKRALTNPAVIEEGAKTQRFVSYQSPEEALEITRKVLTLASREQKERLR
                     QVIFKSR"
     gene            complement(1503..>1997)
                     /locus_tag="VHN20_17130"
     CDS             complement(1503..>1997)
                     /locus_tag="VHN20_17130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727550.1"
                     /translation="LVTGYPDSNAMFLAAERKEVDGRVADLSSVASSRPNWLQPDGMR
                     ALLQFGRSTRHQDFASVPTARELARSDADRQLIEISELPYALTRPYAAPPGVPADRAK
                     ALQAAFMAVHKDPQYLEEASKLKLDISPIDGEEVLRVVDRIGSAPPAILERIKKLQAE
                     NKGG"
BASE COUNT          294 a          653 c          681 g          369 t
ORIGIN      
        1 gccatcacgt caggccgggc cttgtaaatc tcgccatgga tgaagcgttc gctgtagtag
       61 cgcaggcccg tcttgtcgat cgcgttgctg tcgagatcga acgtgacgat gtcgtcgcgc
      121 gtgaccatgc ccggcgggac gtagcgcgac atcagatact tctgcgcatc cttgtcgtgc
      181 cgcacgctga cgtggccgaa ggcgtcgacg accttgtgct gatacaggat cttgttggcc
      241 gcgatcagat cctcgacgat ctcgctcgcg gcggcaggga tttccagact tgcggccatc
      301 ggcctctccc ggttgaatca aactgtcgtg cgccgcgacg ataggggtga ggggagtgcc
      361 cctatccgga gacgtcactt ccgccggtgc gctgccgcgc actcggcctc tcctctggga
      421 gaggtggtaa tctcaccggc tcttgaagat gacctggcgc aggcgttcct tctgctcccg
      481 actggcgagc gtgagcacct tgcgcgtgat ctcgagcgcc tcctcgggcg attggtagct
      541 gacgaagcgc tgcgtcttgg ccccttcctc gatcacggcc gggttggtga gcgcgcgctt
      601 cacggcggcg cgcaggtaag cgagcctgtc cgccggcacc ccgggagtgg tgacgaggat
      661 gcgcccgaga tcgttgaggt tggcgcggaa gtcgagccac cagtcctgct cgggcgtgag
      721 cttcgcctgc tcgaacacgg acggcacatc cggcagcagg gccgagcgcg tgcgcgacat
      781 ggaggcgagg gggcgcgcgt tgttgctctt ggcgaaattg gcagcggagc tgtccgagac
      841 gtagagcgcg tcgacctcgc cgcgctccat ggcgagggcg atgtcgccgc tgctcttgta
      901 gccgaggatg acggagcaat cgacgtgaag cgcttcgcag gtgacgaggg caccgtcggc
      961 cgggccgtcg ctcgggccgg tcccgcccca gcgcaccttg acgcccggct tcatcgtgtc
     1021 ggcgaccgtc ttgaactccg tcttgggccc gaccagccag acccacggat acgcgctgat
     1081 caccccgaga tgctcgacct tggtcaggtc gtagcggatg ttctcctggc cgagcagctg
     1141 gcccagcgcc gccggcgtgc cgttgacgat catcaggcgc aggccgtcag gttgcgccgc
     1201 atagatctgg ttgagcgcca gcagcccgcc ggcgcccggc tggttctcga cgatgacggt
     1261 cgcgtcgagt tccttgccga gatacggcgc gatcatgcgg gcataggcgt cgaagccgcc
     1321 gccgaccccg aggccgacaa cgaagcgcaa cgtcttgccc ttgtagaatg cggcggcgtc
     1381 ctcggcctgc acggccacag ccgagaccgc aagcatcacc gcgccggcga cgactcgcgc
     1441 caatcctgtc ctgcccatgg ttcctccgtt tttattgatg gataggcagt gattgccctt
     1501 tatcagccgc ccttgttctc agcctgcagc ttcttgatcc gctcgaggat tgcgggtggt
     1561 gcgctgccga tccgatcgac cacgcgcagg acttcctcgc cgtcgatcgg gctgatgtcg
     1621 agcttcagct tgctcgcctc ttcgagatat tgcgggtcct tgtggaccgc catgaaggcc
     1681 gcctgcagcg ccttggcgcg gtcggccgga acgcccggcg gggccgcgta ggggcgcgtc
     1741 agggcgtagg gaagctcgct gatctcgatc agctggcggt cggcatcgct gcgcgccagc
     1801 tcgcgcgccg tcggcacgct ggcgaagtcc tggtggcgcg tgctgcgccc gaactgcagc
     1861 agcgcgcgca tgccgtccgg ctgcagccag ttcggccgcg aagaggcgac ggacgacagg
     1921 tcggcgaccc gtccgtcgac ttccttgcgc tcggccgcca ggaacatggc gttgctgtcg
     1981 ggatagccgg tcacgag
//
LOCUS       DATAIQ010001040         3027 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_73643, whole genome shotgun sequence.
ACCESSION   DATAIQ010001040 DATAIQ010000000
VERSION     DATAIQ010001040.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3027)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3027)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3027
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_73643"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..505
                     /locus_tag="VHN20_17135"
     CDS             <1..505
                     /locus_tag="VHN20_17135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX2727551.1"
                     /translation="QYSEYGLQFPVAGFGFDTVVAWGAGKGNFSGIWPLVWHHLVDTP
                     SSKAYVSAFQKKYGKLPDNQSWGDYNSLKIVAQSMTEMKSTDPLKLAEHLRKGAKFDV
                     MKGREAYFRAYDNQMVMEMYAVRAKEASKMKDQWDIYEPLGTVPGPNEDMESIAPPKD
                     NACKMPA"
     gene            704..1579
                     /locus_tag="VHN20_17140"
     CDS             704..1579
                     /locus_tag="VHN20_17140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020091907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX2727552.1"
                     /translation="MELIFLLEQVLNGLLSGAYYLLLALGLSLIFSLGGIVNLAHGGF
                     YAIGAYLAVKLSERIGFAGAFVVSPVLVALIGVIVERLLFRRFYRSDPILSLLLTFGL
                     AMVIEQGLRIMFGAAPLPFSIPPALRGQLFIGDFIYPFYRLIIFGIAVAAVLATWFVV
                     YRTSFGRVVRAGVQNPDMVGALGIPLQPYMTAVAALGVGLAGLAGVLLAPISGVHPAM
                     GAEILTAAFVVVVIGGLGSFWGVIAASVLVGVVRGITIYFYPPAGEVSMYLLMALILL
                     VRPRGLLGERIQKFE"
     gene            1585..>3027
                     /locus_tag="VHN20_17145"
     CDS             1585..>3027
                     /locus_tag="VHN20_17145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX2727553.1"
                     /translation="MRKDDWSLVVAALALAVLPFALDAVGLPLRSSVDVVVFAIASMG
                     LNVLVGHTGLVSFGHGAWFGLAAYAAALSQRHWFPGAIVLPTLFAIGFVAVTAALSGA
                     LILRRRGVYFSLLTLALTAVLFAIGYRWTNFTGGESGLGGVVRPAVLGLNLGSDQVYY
                     WTVAAIGFAVCVLLWRFHRSPAGTVLVAIRENEQRARFIGYPTNRYKLLGFVISAGVV
                     GLAGILSVFNHRFASAEPLAVAFSGELIAMVVIGGMRSFLGPALGALFYILFREFLSI
                     WTPHWLFWFGLLFVGFIVFSPTGLVGVAQRLIAPFRPRVAEDAAMAGRTIASDPLPPF
                     LKPADHTDGPLLEGQGLVKRFGGIKAVQGVDLTVRDRSLHALIGPNGAGKTTAFNLIS
                     GMFRPDEGTIKLRGESIAGLSPEKITRAGIGRSFQITNLFPALTVEENIRLAVQARHR
                     RRFDPWVAARSIGEIEGETATMIRYLGLAGT"
BASE COUNT          406 a         1001 c         1014 g          606 t
ORIGIN      
        1 gcagtattcg gaatacggcc tgcagttccc cgtcgccggc ttcggcttcg acacggtggt
       61 cgcctggggc gccggcaagg gcaatttctc gggcatctgg ccgctcgtct ggcaccacct
      121 cgtcgacacg ccgtcctcga aggcctacgt gtccgccttc cagaagaaat acggcaagct
      181 gcccgacaac caatcctggg gcgactacaa ctcgctgaag atcgtggcgc agtcgatgac
      241 cgagatgaag tcgaccgatc ctttgaagct cgccgagcat ctgcgcaagg gcgccaagtt
      301 cgacgtgatg aaagggcgcg aggcctattt ccgggcctac gacaaccaga tggtgatgga
      361 gatgtacgcg gtccgcgcca aggaggcgag caagatgaag gaccagtggg acatctacga
      421 gccgctcggc accgtgcccg gcccgaacga ggacatggag agcatcgctc cgccgaagga
      481 caatgcctgc aagatgccgg cgtgatgagg ttacctccga cgcatcccgg gcttgcccgg
      541 gatgcgctca ggattcacgc agggccggaa cgccgcgctg cgcggaggga gggcggcccg
      601 gcccagtggg cgctggtgag gggtcttcgt gcggcgcccc atatcgcgcg tctgcactgt
      661 acgcggaggc tctccgtcag tgggagggga ggacggtagc ggcgtggaac tgattttcct
      721 tctcgagcag gtgctgaacg ggctcttgtc cggcgcctat tacctgctgc tcgcgcttgg
      781 cctgtcgctg atcttctcgc tcggtggcat cgtcaacctg gcgcatggcg gcttctacgc
      841 gatcggcgcc tatcttgccg tgaagctctc ggagaggatc gggttcgccg gcgcgttcgt
      901 cgtctcgccc gtgctggtgg ccctgatcgg cgtgatcgtc gaacgtctgc tcttccggcg
      961 cttctaccgg tcggatccga tcctgagcct cttgctcacc ttcggccttg ccatggtgat
     1021 cgagcagggc ctgcggatca tgttcggtgc ggcgccgctg ccgttctcga taccgccagc
     1081 tttgcggggc cagctgttta tcggcgactt catctatccg ttctatcgcc tgataatatt
     1141 cggcatcgcc gtcgcagcgg tcctcgccac ctggttcgtg gtctaccgca cctcgttcgg
     1201 ccgcgtggtg cgcgccggcg tgcagaaccc ggacatggtc ggtgcgctcg gcatcccgct
     1261 gcagccctat atgaccgccg tggcagcttt gggcgtcggt cttgccggcc tcgcgggcgt
     1321 gctgctggcg ccgatctccg gggtgcaccc ggcgatggga gcggagatcc tcaccgctgc
     1381 cttcgtcgtc gtggtgatcg gcgggctcgg ctcgttctgg ggcgtgatcg ccgcctccgt
     1441 tctggtcggg gtggtgcgcg gcatcacgat ctatttctac ccgccggccg gggaggtctc
     1501 gatgtatctc ctgatggcgc tgatcctgct cgtgcgaccg cgcggcctgc tcggcgagcg
     1561 catccagaaa ttcgagtgag gccgatgcgc aaggacgact ggtccctcgt cgtggcggcg
     1621 ctggcgcttg ccgtgctgcc gttcgcgctc gacgcggtcg ggctgcccct gcgctcgtcg
     1681 gtcgacgtcg tcgtgttcgc aatcgccagc atgggcctga acgtgctggt gggtcatacc
     1741 gggctcgtct cgttcgggca cggcgcctgg tttggtctcg ccgcctatgc ggcggcgctg
     1801 agccagcgtc actggttccc gggcgcgatc gtgctgccga cgctgttcgc gatcggcttc
     1861 gtggccgtga cggcggcgct gtcgggcgcc ctgatcctgc ggcgacgcgg cgtctatttc
     1921 tccctgctga cgctggcgct caccgccgtg ctgttcgcga tcggctatcg atggacgaac
     1981 ttcacgggcg gcgaaagcgg cctcggcggc gtcgtgcgcc cggccgtgct cgggctcaac
     2041 ctgggctccg accaggtcta ttactggacc gtcgccgcca tcggctttgc agtctgtgtg
     2101 ctgctgtggc gtttccaccg ctcgccggca ggaacggtgc tggtcgcaat ccgggaaaac
     2161 gagcagcggg cccgtttcat cggctacccg acgaaccgct acaagctgct cggcttcgtg
     2221 atctcggccg gcgtcgtagg cctggcgggc atcctctccg tcttcaacca ccgcttcgcc
     2281 tcggcggagc cgctcgcggt ggctttctcc ggcgaactga tcgcaatggt ggtgatcggc
     2341 ggcatgcgca gcttcctcgg gccggcgctc ggtgccttgt tctacatcct gttccgcgag
     2401 ttcctgtcga tctggacgcc gcactggctg ttctggttcg gcctcctgtt cgtcggcttc
     2461 atcgtgttct cgccgaccgg cctcgtcggc gtggcgcagc gcctcatcgc accgttccgc
     2521 ccccgggtcg ccgaggacgc ggcgatggcg ggacgcacga tcgccagcga cccactccct
     2581 ccttttctga agcccgcgga ccatacggat ggccccctgc tggaaggcca gggcctcgtc
     2641 aagcgcttcg gcggcatcaa ggcggtgcag ggggtcgatc tcacggtgcg cgaccgcagc
     2701 ctgcatgcgt tgatcggccc taacggtgcc ggcaagacaa cggcgttcaa cctgatttcc
     2761 ggcatgttcc gtccggacga aggcacgatc aagctgcgcg gcgagtcgat cgccggcctt
     2821 tcgccggaaa agatcacccg cgccggcatc gggcgctcgt tccagatcac caacctgttt
     2881 ccggcgctga cggtcgaaga aaacatccgt ctcgccgtgc aggcgcgcca tcggcgccgc
     2941 ttcgatccgt gggtggcggc acggtcgatc ggcgagatcg agggtgagac cgcgaccatg
     3001 atccgctatc tcggccttgc cgggacc
//
LOCUS       DATAIQ010001041         2016 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_266527, whole genome shotgun sequence.
ACCESSION   DATAIQ010001041 DATAIQ010000000
VERSION     DATAIQ010001041.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2016)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2016)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2016
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_266527"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(167..739)
                     /locus_tag="VHN20_17150"
     CDS             complement(167..739)
                     /locus_tag="VHN20_17150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012331062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727554.1"
                     /translation="MTDRGRFLLATLCGLVLAGIVHLTAVLAMPWLSERDAFSRLRAT
                     MTADKSELVAAPAVSETWLPHPDPAVAVAACAYNLDEGPVRISAKTGPLFESLSFHAR
                     GGGVFFAITDRAAIRGMLDLVVMTRRQLDEALAVEDEDEPSRDVRIVAPQREGLVIVR
                     ALAAFPSLREDAEQTAKSVSCTIDQPEVTR"
     gene            complement(736..1410)
                     /locus_tag="VHN20_17155"
     CDS             complement(736..1410)
                     /locus_tag="VHN20_17155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012452797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1214 domain-containing protein"
                     /protein_id="HEX2727555.1"
                     /translation="MTRTDVAPTSELAQWMRAAAQLRNAKLPRRALAPAVLVIYAVSI
                     ALLAGLGSAFWAVKDSYPFGTVRANTWVAAPRVGSREVDPYAKAVVARSAEIPLATGE
                     GLMLTATQDEAGRPLDPHCNYRIGTVTPQARYWTVTLYDDAGHPVVSELQRSGFTSAE
                     IMREADGRFAIALSREPMPGNWLRLPERGRPSVVLRLYDTPVAAGSAALDPRTLPVVE
                     RLGCAS"
     gene            complement(1407..>2016)
                     /locus_tag="VHN20_17160"
     CDS             complement(1407..>2016)
                     /locus_tag="VHN20_17160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /protein_id="HEX2727556.1"
                     /translation="EVIYRRDSNGKEPEQVLPPRVVADMNFMLSKVVEEGTGKRAALE
                     NIRSAGKTGTTNAYRDAWYIGYTGNLVASVWFGNDDHTSTNNMTGGSLPAMAWHEVMA
                     FAHQNLEIRPIPYLSPDGGQLVASTGRGQAAPQLRGLEIVSTGSVNGLLSRRSFEVIG
                     GIGELFRKVERAPAPLSAVQAPERAASNVTGGRATGGRIALP"
BASE COUNT          320 a          681 c          679 g          336 t
ORIGIN      
        1 tcacttcagg cgaatcgatc gtgcttcgaa tttctgttga atcgcatgat cttatccggc
       61 gaatggtgtc caccccggat ccgtcgttcc ggaacatcct ttagcggagt gacaccgacg
      121 ttccggtaag gctcgtctgg agcggcacgc cgctctcccg gggcgctcag cgcgtcacct
      181 ccggctggtc gatcgtgcag gagaccgact tcgcggtttg ctcggcgtct tcgcgcaggc
      241 tggggaaggc cgcgagcgcg cgcacgatca ccaggccctc ccgttggggc gccacgatac
      301 gcacatccct tgacggctcg tcctcatcct cgaccgccag ggcttcgtcc agctggcggc
      361 gggtcatcac gacaagatca agcatcccgc ggatcgccgc gcgatcagtg atcgcaaaga
      421 agacgccgcc gccgcgggcg tgaaacgaca gcgactcgaa caacggcccg gttttcgccg
      481 atatgcgcac cggtccttcg tcgaggttat acgcacaggc ggcaacggcg acggccggat
      541 caggatgcgg cagccacgtt tcgctgaccg ctggcgccgc cacgagctcg gacttgtcgg
      601 ccgtcatggt cgcccgcagg cgcgagaacg cgtcgcgctc gctgagccac ggcatggcca
      661 gcacggccgt gaggtgaacg atgccggcga gcacgagccc gcatagcgtc gccagcagaa
      721 atcttccgcg gtcggtcatg atgcgcagcc gagacgttcg acgaccggaa gcgtgcgcgg
      781 atcgagcgcc gccgaccctg cggcgacagg cgtgtcataa agccggagca ccacgctggg
      841 ccgcccccgt tccggcagtc tcagccagtt gcccggcatc ggctcgcgcg agagcgcgat
      901 cgcgaagcgt ccgtcagctt cgcgcatgat ctctgcggag gtgaagccgc tgcgctgcag
      961 ctccgatacg accgggtggc cggcgtcgtc gtagagcgtc accgtccagt agcgcgcctg
     1021 cggcgtgacc gtgccgatgc ggtagttgca atgcgggtcg agcgggcggc ccgcctcatc
     1081 ctgcgtcgcg gtcagcatga gcccttcgcc ggtcgcgaga gggatctcgg cgctgcgcgc
     1141 cacgaccgcc ttggcgtaag ggtcgacctc acgcgagccg acccgtggag ctgcaaccca
     1201 cgtgttggcg cgcacagtac cgaatggata cgagtccttc accgcccaga aggccgagcc
     1261 gaggccggcc agcagggcga tgctgacggc atagatcacc agcaccgcgg gcgccagcgc
     1321 gcgtcgcggc agcttggcat tgcgcaattg agcagccgcg cgcatccatt gcgccagctc
     1381 gctcgtcggg gcgacgtcgg tcctggtcac ggcagagcga tgcggccgcc cgtcgcgcgt
     1441 ccgccggtga cgttggatgc tgcgcgctcg ggcgcctgca cggcgctgag gggagccggc
     1501 gcgcgctcca ccttgcggaa cagctcgccg atcccgccga tcacctcgaa ggagcggcgc
     1561 gacagcaatc cgttcacgct gccggtggag acgatctcga gcccgcgcag ttgcggggct
     1621 gcttgtccgc gtcccgtgct tgcgaccagc tgcccgccat caggcgagag atagggaatg
     1681 ggcctgatct cgaggttttg gtgcgcgaac gccatcacct cgtgccacgc catggccggc
     1741 aggctgccgc cggtcatgtt gttggtggag gtatgatcgt cgttgccgaa ccagacgctc
     1801 gcgaccagat tgcccgtata gccgatgtac caggcgtcgc gatacgcatt ggtcgtgccg
     1861 gtcttgccgg ccgagcggat attctccagc gcagcgcgct tgccggtgcc ttcttcgacc
     1921 accttggaga gcatgaagtt catgtcggcg acgacccgtg gcggcaggac ctgctcgggt
     1981 tccttgccat tgctgtcgcg gcgatagatc acctcg
//
LOCUS       DATAIQ010001042         1530 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_266577, whole genome shotgun sequence.
ACCESSION   DATAIQ010001042 DATAIQ010000000
VERSION     DATAIQ010001042.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1530)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1530)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1530
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_266577"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            62..241
                     /locus_tag="VHN20_17165"
     CDS             62..241
                     /locus_tag="VHN20_17165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015686906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727557.1"
                     /translation="MITLIARVALAAGGLMAGWFVARNAPNFNVIQGIAAMLIIAAVV
                     AAAALWPALRRRGRE"
     gene            359..>1530
                     /locus_tag="VHN20_17170"
     CDS             359..>1530
                     /locus_tag="VHN20_17170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015930709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HEX2727558.1"
                     /translation="MSIIRFIFGRRLANRESGERKIGAFEGVPAMGLDGLGSSAYGPE
                     AALTVLIPLGAASLAYIGWVMAPIVALLAILFASYWQTIRAYPSNGGAYIVSKENLGT
                     NASLLAAAALMIDYVLNVAVGISAGVAALVSAAPTLHPYILPLCLGILLLVTVVNLRG
                     TLDAGRLFALPTYLFVASFAAILAIGLYKAVSSGGDPSPVVPPPPLGPAVEAASLWLL
                     LRAFASGCTAMTGVEAVSNGMSAFRDPAIRYGHRTLTAIVVILGSLLAGIAYLATAYG
                     IGAMNQTKEGYRSVLSQLASAVVGEDVFYYVAIGSLLCVLALSANTSFVDFPRLCRMI
                     AQDGFLPKPFAVVGRRLVFSIGIIYLAVTAGLLLTLFGGITEHLIPLFAVGAFLTFT"
BASE COUNT          212 a          513 c          498 g          307 t
ORIGIN      
        1 tctatggtga tgtcgctcgg accgatcgag cggatgcgtc gccagaagag caaagtccgc
       61 aatgatcacg ttgattgcac gggttgcgct cgccgccggc ggcctcatgg ccggctggtt
      121 cgttgcaagg aacgcgccca acttcaacgt cattcagggc atcgccgcga tgctgatcat
      181 tgcggccgtg gtcgcggcgg ccgcgctctg gccggcgctg cggcggcgcg gtcgcgagta
      241 ggcgtcccga taaacccggt cacagtccgc aaatcggtcg cgtcctgcac tggaggatcc
      301 ctggaacctt ttgatcgagg tccggttcct tagcgtcacg gggtgggcgg agcgcagctt
      361 gagcatcatc aggttcatct tcgggcgcag gctggccaac cgcgaatccg gcgagcggaa
      421 gatcggcgcg ttcgaaggcg tcccggccat ggggctcgac ggcctcggct cgtccgccta
      481 cgggcccgag gccgcgctga cggtgttgat cccgctcggg gcggcgagcc tcgcctatat
      541 cgggtgggtg atggcgccga tcgtggcgct gctcgccatc ctgttcgcct cctactggca
      601 gacgatccgc gcctatccta gcaacggcgg tgcctacatc gtgtcgaaag aaaatctggg
      661 cactaacgcg agcctgctcg cggcggcggc gctgatgatc gactacgtcc tcaatgtcgc
      721 ggtcgggatc tcggcaggcg tcgccgcgct cgtctcggcg gcgccgacgc tgcatcccta
      781 catcctgccg ttatgcctcg gcatcctgct cctcgtcacg gtcgtgaacc tgcgcggcac
      841 gcttgatgcg ggacgcctgt tcgcgctccc cacttacctg ttcgtggcga gctttgcggc
      901 gattctggcg atcggcctct acaaggccgt gtcgtccggt ggagatccct cgccggtcgt
      961 gccgccgccg ccgctcggcc cagcggtcga ggctgcgagc ctgtggctgt tgctgcgcgc
     1021 cttcgcgagc ggatgcacgg ccatgaccgg ggttgaagcc gtcagcaacg gcatgagcgc
     1081 cttccgtgat ccggcgatca gatacggcca tcgcacgctg accgccatcg tcgtcatcct
     1141 cgggtccctg cttgccggga tcgcctatct cgccaccgct tacggcatcg gcgcgatgaa
     1201 ccagaccaaa gagggctaca ggagcgtgct gtcgcaactc gccagcgccg tcgtcggcga
     1261 ggatgtcttc tattacgtgg cgatcgggtc gctcctgtgc gtgctcgccc tttcggcgaa
     1321 taccagcttc gtcgactttc cgcgactgtg ccggatgatc gcgcaggacg gcttcctgcc
     1381 gaagcccttc gcggtggtcg gacggcgcct tgtgttctcg atcggcatca tctacctggc
     1441 ggtgacggcc ggcctgcttc tcacactgtt cgggggcatc accgagcacc tgatcccgct
     1501 cttcgccgtc ggcgcttttc tgaccttcac
//
LOCUS       DATAIQ010001043         1538 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_358623, whole genome shotgun sequence.
ACCESSION   DATAIQ010001043 DATAIQ010000000
VERSION     DATAIQ010001043.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1538)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1538)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1538
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_358623"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1233
                     /locus_tag="VHN20_17175"
     CDS             <1..1233
                     /locus_tag="VHN20_17175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009758182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase HerA-like domain-containing protein"
                     /protein_id="HEX2727559.1"
                     /translation="LARLMNLNEVQEGVLTIAFHVADKEGLALVDLDDLQSMLVNVGE
                     RAEELTLEYGNVAKPSVGAIQRSLLQLRSQGGDHFFGEPALELEDFLKLDENGRGVVN
                     ILAADRLMASPRLYSTFLLWLLSELFESLPEVGDPDKPKLAFFFDEAHLLFDDAPPAL
                     LEKVEQVVRLIRSKGVGVYFITQNPIDIPDKVAGQLGNRVQHALRAFTPRDEAAVKSA
                     AETFRPNPSVDVASAITELKVGEALVSLLQPDGAPSPVERTLIQPPRSRVGPISAQER
                     AIMISTDAIGTRYDTALDRDSAEEILKAKADEAAAAAAATKAASEQEKQAAEDARVRA
                     REEREAARTRAAEQREADRQAREAEREEARRAREAARPSMADKMMQSAGRAVASSVGR
                     QIGNQLLRGIFGGLMRGR"
     gene            1223..>1538
                     /locus_tag="VHN20_17180"
     CDS             1223..>1538
                     /locus_tag="VHN20_17180"
                     /inference="COORDINATES: protein motif:HMM:NF025887.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX2727560.1"
                     /translation="MAAERAVVAKLEQAWRDALFAKDEAALRKLIHPDFKLVGIRSTG
                     TVGVGLEDWLVALRKMDIASLEVRVIDSIEVEGTIVSTVDAQWKVRFMGHPIDERVLL
                     TDV"
BASE COUNT          261 a          506 c          536 g          235 t
ORIGIN      
        1 ctcgcgcggc tgatgaacct caacgaggtg caggagggcg tcctgacgat cgctttccat
       61 gtcgccgaca aggaggggct ggcactggtc gacctcgacg acctgcagtc gatgctggtc
      121 aacgtcggcg agcgcgccga ggagctgacg ctggaatatg gcaatgtcgc caagccgagc
      181 gtcggggcga tccagcgctc gctgctgcag ctgcgttcgc agggcggcga ccacttcttc
      241 ggcgagccgg cgctcgagct cgaggatttc ctcaagctcg acgagaacgg gcggggggtc
      301 gtcaacatcc tcgccgccga ccggctgatg gcctcgccga ggctctattc gacgttcctt
      361 ctgtggctgc tctcggagct gttcgagtcg ctccccgagg tcggcgatcc ggacaagccc
      421 aagctcgcct tcttcttcga cgaggcgcac ctgctgttcg acgatgcgcc gccggccctg
      481 ctcgaaaagg tcgagcaggt cgttcgcctg atccggtcga aaggcgtcgg tgtctatttc
      541 atcacccaga atccgatcga cattccggac aaggtcgccg gccagcttgg caaccgcgtc
      601 cagcatgcgc tgcgcgcgtt cactccgcgc gacgaggcgg cggtcaaatc cgctgccgag
      661 acgttccggc ccaaccccag cgtcgacgtt gcatcggcga tcaccgagct gaaggtcggc
      721 gaggcgctgg tttctctgct tcagccggac ggcgcaccgt cgccggtcga gcgcacattg
      781 atccagccgc cgcgcagccg ggtcgggccg atttccgcgc aggagcgggc gatcatgatc
      841 agcaccgacg ccatcggcac gcgctacgac accgccctcg accgcgacag cgcggaggaa
      901 atcctcaagg ccaaggcgga cgaagcggcc gccgcggccg cggcaaccaa ggcggccagc
      961 gaacaggaaa agcaggccgc cgaggatgcc agggtccgcg cccgcgagga acgggaagcg
     1021 gcgcgaacgc gggccgccga gcaacgcgaa gccgaccgcc aggcgcgcga agccgagcgc
     1081 gaggaagccc ggcgcgcgcg tgaggccgcg aggccatcca tggccgacaa gatgatgcag
     1141 tcggcggggc gcgccgtggc gtcgtcggtc ggccggcaaa tcggcaacca gctgctccgc
     1201 ggcattttcg gcgggctgat gcgtggccgc tgagcgcgcc gtcgtcgcca agttggagca
     1261 ggcatggcgc gacgccttgt ttgccaagga tgaggcggcg ctgcgcaagc tgatccaccc
     1321 cgatttcaag ctggtcggga tccgctccac tggcaccgtc ggggtcggcc ttgaagactg
     1381 gctggtcgcg cttcggaaga tggacatcgc cagcctcgag gtgcgggtaa tcgattcgat
     1441 cgaggtcgag ggcacgatcg tctcgacggt cgacgcgcag tggaaggtgc gtttcatggg
     1501 ccatccgatc gacgagcgcg tgctgctgac cgacgtct
//
LOCUS       DATAIQ010001044         2694 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_220970, whole genome shotgun sequence.
ACCESSION   DATAIQ010001044 DATAIQ010000000
VERSION     DATAIQ010001044.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2694)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2694)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2694
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_220970"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1205
                     /locus_tag="VHN20_17185"
     CDS             <1..1205
                     /locus_tag="VHN20_17185"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase"
                     /protein_id="HEX2727561.1"
                     /translation="GQADNWSAITAGRSGIHAITRFPTEGLRTRIGGTIDFITVEPFC
                     APALSERFAMLAAEEAIGQSGVGKPGDFPGPLFIAVPPVEFEWPQRKALAEASGQNDA
                     VTYKDLLKSAATGRFREWHDLFLFGTVADHVADRFGTKGSPISLSTACSSGGTAIQLG
                     VEAIRRGETDAALCIGTDGSVNPESLIRFSLLSALSTQNDPPQGAAKPFSKNRDGFVM
                     GEGAAALVLESAEAAEARGANILGYVLGCGEKGDGFHRTRSSPDGAPIIAAIREAIDD
                     AGLNPDDIDYVNAHGTGTPENDKMESLGCMAVIGDRMKSVPISSNKSMVGHTLTAAGA
                     VEAVFSLLTIAEGRIPPTINYNLPDPVIPLDVVPNAARDADVAFVLSNSFGFGGQNTC
                     LVFGAEPK"
     gene            1216..1965
                     /locus_tag="VHN20_17190"
     CDS             1216..1965
                     /locus_tag="VHN20_17190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX2727562.1"
                     /translation="MSRRVLVTGGAKGVGAAIVRALAAAGHDVDFTFRSSGDAALALA
                     DELQRAHPTQSFVTHSVDLAEKTSLDIFCDTIEKETFFGLVHNAGQPYDALAAMMAQD
                     KAEAAMQVNFWSLSRLAKTMMRGMIRARAGRIVAIGSVAALQGNPGNAAYAASKGALL
                     SYCRTLAIETAKRGVTVNYIAPGFIDTDMMAPYAAYRADMEKQIPAGRFAAPEEIAGT
                     VAFLMSPPAVYITGAVIPVDGGLTAMIGVHR"
     gene            2113..>2694
                     /locus_tag="VHN20_17195"
     CDS             2113..>2694
                     /locus_tag="VHN20_17195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018648452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEX2727563.1"
                     /translation="MHRRDFLKGAVATPAVTAASLAAPAGWAQERWPTRNITMVAPFP
                     PGGQADLAARPIAAALEKILGRSVIVENRAGAGGLVGNASVARAEPDGYTLAMTLSSL
                     AVLPESERLFGRQPSYEVSQLAPVARVLADPTLLAVSASAPWKTLKELVEDARQRPGQ
                     IPYGSSGPYGTLHVAMEMFANSAGIKLLHVPYRG"
BASE COUNT          412 a          984 c          871 g          427 t
ORIGIN      
        1 agggccaggc cgacaactgg tcggccatca ccgccggccg ctccggcatc catgcgatca
       61 cccgctttcc gaccgaaggc ctgcgcacca ggatcggcgg caccatcgat ttcatcaccg
      121 tcgagccgtt ctgcgcgccc gccttgtccg agcgcttcgc catgctggcg gccgaggagg
      181 cgatcggcca gtcgggggtg ggcaagcccg gcgactttcc cggcccgctc ttcatcgccg
      241 ttccgccggt ggagttcgag tggccgcagc gcaaggcatt ggcggaagct tccggccaga
      301 acgacgccgt cacctacaag gatctcctga agtctgccgc gaccggccgc ttccgcgagt
      361 ggcacgacct gttcctgttc ggcacggtgg cggaccacgt ggccgatagg ttcggcacca
      421 aggggtcgcc gatctcgctc tcgacggcct gctcgtccgg cggcacggcc atccagctcg
      481 gcgtcgaggc gatccgccgc ggcgagacgg acgccgccct gtgcatcggc acggacgggt
      541 cggtgaaccc ggaatcgctg atccgcttct cgctgctttc ggcgctgtcg acgcagaacg
      601 atccgccgca aggcgccgcg aagccgttct ccaagaaccg cgacggattc gtcatgggcg
      661 aaggcgccgc ggcgctggtt ctcgaaagcg ccgaggcggc cgaggcgcgc ggcgccaaca
      721 tcctcggcta cgtgctcggc tgcggcgaga agggcgacgg cttccaccgc acgcgctcga
      781 gcccggacgg cgccccgatc atagccgcca tccgcgaagc gatcgacgac gccggcctta
      841 acccggacga catcgactac gtcaacgcgc atggcaccgg cacgcccgag aacgacaaga
      901 tggagtcgct gggctgcatg gccgtgatcg gcgatcgcat gaagagcgtg ccgatctcgt
      961 ccaacaagtc gatggtcggc catacgctga ccgcggccgg cgcggtcgag gcggtgttct
     1021 cgctgcttac catcgccgaa gggcgcattc cgccgaccat caactacaac ctgcccgacc
     1081 ccgtcatccc gctggacgtc gtgcccaacg cggcgcgcga cgccgacgtc gccttcgtcc
     1141 tttcgaactc gttcggcttc ggcggccaga acacctgtct cgtcttcggg gccgaaccga
     1201 aatgatgcgg acctcatgag caggcgcgtc ctcgtcaccg gcggcgccaa gggcgtcggc
     1261 gccgccatcg tgcgggcgct cgcggccgcc gggcacgacg tcgatttcac cttccgctcc
     1321 tcgggcgacg cggcgcttgc cttggccgac gagctgcagc gcgcgcatcc aacgcaaagc
     1381 ttcgtcaccc attcggtcga tctcgccgag aaaacgtcgc tcgacatctt ttgcgacacg
     1441 atcgagaagg agaccttctt cggcctcgtg cacaacgccg gccagcccta cgacgccctc
     1501 gcggccatga tggcgcagga caaggccgaa gccgccatgc aggtcaattt ctggtcgctg
     1561 tcccgcctcg ccaagacgat gatgcgcggc atgatccggg cccgcgccgg gcgcatcgtg
     1621 gcgatcggct cggtggcggc cctgcaaggt aatccgggca acgccgccta cgcggcgtcc
     1681 aagggcgcac tgctgtccta ctgccgcacc ctggcgatcg agaccgccaa gcgcggtgtc
     1741 acggtcaatt acatcgcccc cggcttcatc gacaccgaca tgatggctcc ctacgccgcc
     1801 tatcgggccg acatggagaa gcagattccc gccgggcgct tcgccgctcc cgaggagatc
     1861 gccggcacgg tcgcgttcct gatgagcccg cccgcggtct acatcaccgg cgccgtcatc
     1921 ccggtcgacg gcggcctgac ggcgatgatc ggcgtgcacc gctgaggcct gtgcggccgt
     1981 ccctggcatt tcgcgataat ccttgccctt gcaatccaac cggtgctgtg atgatgcgcc
     2041 cggtggagcg cgcatgcccc gacgccgctc cccgcaacga caagccgctt tttcgagcgc
     2101 gcaggaggaa acatgcatcg tcgcgacttt ctcaagggcg ccgtcgccac gcccgcagtg
     2161 acggccgcca gcctcgccgc tcccgccggg tgggcgcagg agcgctggcc gacgcgcaac
     2221 atcaccatgg ttgcgccgtt tccgccgggc ggtcaggccg atctcgcggc ccggcccatc
     2281 gccgccgccc tcgagaagat tctcggccgg tccgtcatcg tcgagaaccg cgccggcgcc
     2341 ggaggtctgg tcggaaacgc ctcggtggcc cgcgccgagc cggacggcta caccctggcc
     2401 atgaccttgt cgtcgctcgc cgtgctgccg gaatccgagc ggctgttcgg gcggcaaccg
     2461 tcttacgagg tttcgcagct cgctcccgtc gcgcgcgtgc tcgccgaccc gacgcttctc
     2521 gcggtctccg cgtcggcgcc gtggaagacg ctcaaggagt tggtcgagga tgccaggcag
     2581 cgtccgggcc agatccctta cggctcgtcc gggccttacg gcacgctgca cgtggccatg
     2641 gagatgttcg ccaattcggc cggcatcaag ctgctgcacg tgccgtatcg cggc
//
LOCUS       DATAIQ010001045         4393 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_221032, whole genome shotgun sequence.
ACCESSION   DATAIQ010001045 DATAIQ010000000
VERSION     DATAIQ010001045.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4393)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4393)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4393
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_221032"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..670)
                     /locus_tag="VHN20_17200"
     CDS             complement(<1..670)
                     /locus_tag="VHN20_17200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018246651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2727564.1"
                     /translation="MARITLEKLRHSYQPRPRADEDWALKRLDIEWSDGGAYALLGPS
                     GCGKTTLLNIISGLVRPTEGRVLFDGVDLTDVPTERRQIAQVFQFPVVYDTMTVYDNL
                     AFPLRNRGIAEREVDARVRDIARMLDLQAMLGRRAAGLTADGKQKISLGRGLVRPDVN
                     VIMFDEPLTVIDPHLKWQLRSKLKELHRRLARTMIYVTHDQTEALTFADKVVVMHEGT
                     VVQIG"
     gene            complement(721..1788)
                     /locus_tag="VHN20_17205"
     CDS             complement(721..1788)
                     /locus_tag="VHN20_17205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007788441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2727565.1"
                     /translation="MTLELRGVVKRVGAETHIHETNLTLAENGFNILLGTTLAGKTTL
                     MQLMAGLERPSAGEVWFDGRNVTGLPVQKRNVAMVYQQFINYPNFSVFENIASPLRVA
                     GLKPAEVDARVRRMAELLRLTPMLSRRPAELSGGQQQRTALARALVKDAALVLLDEPL
                     ANLDFKLREELRDELPRLFAGRRCTVVFATSDPTEALLLGGHTAALHEGRVTEFGPTA
                     AVYRRPANLLTAEVFSNPPINTAPVVKQGGIVVLSDAMRWPAEGGMRDRPDGSYTLAI
                     RPHHIRPVADGRAAAPLDGKVLIAELSGSESVIHFAHGPLTWVSQSHGVRAIEVGATA
                     RFDLDIGQCMYFGPDGGRVAP"
     gene            complement(1958..3670)
                     /locus_tag="VHN20_17210"
     CDS             complement(1958..3670)
                     /locus_tag="VHN20_17210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012331843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX2727566.1"
                     /translation="MAAVAALAIGGSQALAGMDEARRWVDREFQPSTLSKEQQLQEME
                     WFVKAATPFRGLEVNVLSETIPTHEYEARTLAKAFEEITGIKVNHQLLGEGEVVQAVQ
                     TQMQTNRNLYDAYINDSDLIGTHSRLRLAVNLTDWMAGEGKDVTLPTLDVNDFIGKSF
                     TTGPDGKLWQLPDQQFANLYWFRYDWFQRKDLKEKFKELYGYDLGVPLDWSAYEDIAE
                     FFSVHVKEIDGVRIYGHMDYGKRAPDLGWRMTDAWLSMAGASSKGLPNGRPIDEWGIR
                     MEEGSCNPAGASVSRGGEANGPAAVYAIRKWDEWLRKYAPPGAADYDFYQSLPALSQG
                     NVAQQIFWYTAFTAEMVKPKSEGNNTVDKDGNVLWRMAPSPRGPYWQEGMKLGYQDAG
                     SWTLFNSTPLARRKAAWLYAQFTVSKTVSLKKSHVGLTIIRDSDIRHASFSERAPKLG
                     GLVEFYRSPDRVRWTPTGINVPDYPKLAQLWWQNIGDVNSGAFTPQQAMDRLAREMDQ
                     VMARMEEVDKKANVYGGCGPRLNAEKNPKEWLGRPDGPKAQLANEKPRGQTVDYDELV
                     KRWK"
     gene            complement(3992..>4393)
                     /locus_tag="VHN20_17215"
     CDS             complement(3992..>4393)
                     /locus_tag="VHN20_17215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727567.1"
                     /translation="LRLIVSSIQVLAEGHGFERWGNLPRERQRLFELIRDTRAEGVVF
                     PSGDRHIGALYREANGTPYPFVEITSSGLTQAFPGAREPGPNRLGALYGAGNFGSIDV
                     DWWQRTVTLNLRAVNGRTVRRETVSLDALKP"
BASE COUNT          677 a         1472 c         1500 g          744 t
ORIGIN      
        1 atccgatctg caccacggtg ccttcgtgca tcaccacaac cttgtcggcg aaggtcaggg
       61 cttcggtctg gtcgtgcgtg acgtagatca tcgtgcgcgc gaggcgccga tgcagttcct
      121 tgagcttgga gcgcagttgc cacttgaggt gtggatcgat gacggtcagc ggctcgtcaa
      181 acatgatcac gttgacgtcc gggcgcacga ggccgcggcc gagcgagatc ttctgcttgc
      241 cgtcggccgt gaggcccgcg gcgcgcctgc cgagcatcgc ctgcaggtcg agcatgcgcg
      301 cgatgtccct gacccgcgcg tcgacctcgc gctcggcgat gccgcggttg cgcagcggga
      361 aggcgaggtt gtcgtagacc gtcatggtgt catagacgac cgggaactgg aacacctgcg
      421 cgatctggcg ccgctcggtc ggcacgtcgg tcaggtcgac gccgtcgaag aggacacgtc
      481 cctcggtcgg gcgaaccagc ccggaaatga tgttgagcaa cgtcgtcttg ccgcagccgg
      541 acgggccgag cagcgcatag gcgccgccgt cggaccactc gatgtcgagc cgcttgaggg
      601 cccagtcctc gtcggcgcgc ggccggggct ggtagctgtg cctgagcttt tcgagcgtga
      661 tcctcgccat cggcgcatct caccgggcgc acgccatgcc ggcggggcgg cagcgcgagc
      721 tcatggcgcc acccgcccgc cgtcggggcc gaaatacatg cattggccga tatcgaggtc
      781 gaaccgcgcc gtggcgccga cctcgatggc gcgcacgccg tgcgactgcg acacccaggt
      841 cagcggcccg tgcgcgaaat ggatcacgct ctccgatccg ctcagctcgg cgatcagcac
      901 cttgccgtcg agcggcgccg ccgcgcgccc gtcggcgacc ggcctgatgt gatgcggccg
      961 gatggcgagc gtatagctgc cgtccggacg atcgcgcatg ccgccttcag cgggccatcg
     1021 catcgcgtcg ctcagaacca cgatgccgcc ctgcttgacg acgggcgcgg tgttgatcgg
     1081 cggattggag aagacctcgg cggtcaagag gttggccggc cgccgataca ccgcggcggt
     1141 cggtccgaac tcggtgaccc tgccttcgtg cagggccgcc gtatggccgc cgaggagcag
     1201 cgcctcggtg ggatcggagg tggcgaacac gaccgtgcag cggcggcccg cgaacagcct
     1261 gggcagctcg tcgcgcagct cctccctgag cttgaagtcg agattggcga gcggctcgtc
     1321 gagcagcacc agcgcggcat ccttgaccag ggcgcgggcc agcgcggtgc gctgctgctg
     1381 gccgcccgaa agctccgccg ggcggcgcga cagcatcggc gtgagccgca ggagctcggc
     1441 catgcggcgc acgcgcgcgt cgacctcggc cggcttcagc ccggcgacgc gcagcggcga
     1501 ggcgatattc tcgaacaccg agaaattcgg atagttgatg aactgctggt agaccatcgc
     1561 cacgttccgc ttctgcacgg gcagcccggt gacgttcctg ccgtcgaacc agacctcgcc
     1621 cgcgctcggg cgctcgagcc ccgccatcag ctgcatcagg gtcgtcttgc cggccagcgt
     1681 cgtgccgagc aggatgttga agccgttctc ggcgagcgtg aggttcgtct cgtgaatgtg
     1741 cgtctcggcg ccgacgcgct tgaccacgcc tctcagttca agggtcacgt catggtcccc
     1801 gatgcgctcg cgagcaacgc tgcagtgcag gcccgcaagt atcggccagg agcgtcgcgg
     1861 cgggaagcgg ggatgcgcgg ccgcatcaca ggcgccgacg acagccgccc ggagtgaagg
     1921 gcggcccggc cgggacaagg gccgggccgc ggtcgcatca tttccagcgc ttgacgagct
     1981 cgtcgtaatc gaccgtctgg cctctcggct tttcattggc gagctgggcc ttgggaccgt
     2041 ccggccgtcc gagccactcc ttcgggttct tctccgcgtt gaggcgcggc ccgcagccgc
     2101 catagacgtt cgccttcttg tcgacttcct ccatgcgcgc catgacctgg tccatctccc
     2161 gcgccaggcg gtccatcgcc tgctgcggcg tgaaggcacc ggaattgacg tcgccgatgt
     2221 tctgccacca cagctgagcg agcttgggat aatccggcac gttgatgccg gtgggcgtcc
     2281 agcgaacgcg gtcgggcgag cggtagaact cgaccaggcc gccgagcttc ggcgcgcgct
     2341 cgctgaacga ggcatggcgg atgtcgctgt cgcggatgat ggtgagcccg acatggctct
     2401 tcttcagcga cacggtcttg gacaccgtga actgggcgta gagccacgcc gccttgcgcc
     2461 gcgccagcgg cgtggagttg aacagcgtcc acgacccggc atcctggtag ccgagcttca
     2521 tgccctcttg ccagtacggg ccgcgcggcg agggagccat gcgccacaag acgttgccgt
     2581 ccttgtcgac ggtgttgttg ccctcgctct tcggcttgac catctcggcc gtgaacgcgg
     2641 tgtaccagaa gatctgctgc gccacgttgc cttgcgacag cgccggcagc gactggtaga
     2701 agtcgtaatc ggcggcgccg ggcggcgcgt atttgcgcag ccactcgtcc catttgcgga
     2761 tggcgtagac ggcagccggg ccgttcgcct cgccgccgcg gctcacggaa gcgccggccg
     2821 ggttgcagct gccttcctcc atgcggatgc cccattcgtc gatgggacgg ccgttgggca
     2881 ggcctttcga gctggcgccg gccatcgaca gccacgcatc cgtcatgcgc cagccgaggt
     2941 cgggcgcgcg cttgccgtag tccatgtggc cgtagatgcg gacgccgtcg atctccttga
     3001 cgtgcacgga gaagaactcg gcgatgtcct cgtaggccga ccagtcgagc gggacgccga
     3061 ggtcgtagcc gtaaagctcc ttgaacttct ccttgaggtc cttgcgctgg aaccagtcgt
     3121 agcggaacca gtacaggttc gcgaattgct ggtcggggag ctgccagagc ttgccgtccg
     3181 ggccggtcgt gaaggacttt cctatgaagt cgttgacgtc gagcgtcggc aacgtcacgt
     3241 ccttgccctc gcccgccatc cagtcggtga ggttgaccgc cagccgcagc cgcgaatgcg
     3301 tcccgatcag gtcggaatcg ttgatgtagg cgtcatagag attgcggttg gtctgcatct
     3361 gggtctgcac cgcctggacg acttcgccct cgcccagaag ctggtggttg accttgatgc
     3421 ccgtgatctc ctcgaaggcc ttggcaagcg tccgggcctc gtattcgtgc gtcgggatcg
     3481 tctccgacag cacgttgacc tccaggccgc ggaacggcgt cgccgccttc acgaaccatt
     3541 ccatctcctg gagctgctgc tctttgctca gcgtcgaagg ctgaaactcg cggtcgaccc
     3601 agcgcctggc ttcgtccatg ccggcgaggg cctggctgcc accgatcgcg agcgccgcga
     3661 cggcggccat ggccgtcaat cgtcccgtca taggatcctc ccaaggaagt tctttttcac
     3721 gatcagagac gaactgccac gctacagacg aagcgacgcg aatgcaatcg aaagcggcgg
     3781 tgcgccgcgt atcggcgagg tcgcgcggcg cgaatacggc gtgacgcgtg catccgcgcc
     3841 gccgcctgtc gcagaccgcc ggagcacccg gcgcagcgcg ccgtgaacgc gacgtgggaa
     3901 gcgaatccgc ttgttgccgc aaggaagccg atggtccggc ccgaccattg tcctgtgcga
     3961 ccggccgcgg cggccgccgc catgacggga ctcacggctt cagcgcgtcg agcgacaccg
     4021 tttcgcgccg caccgtcctg ccgttcacgg cgcggagatt caaggtcacg gtgcgctgcc
     4081 accagtcgac gtcgatggag ccgaaattgc cggcgccata gagcgcgccg aggcggttgg
     4141 gccccggctc gcgggcaccc ggaaaggctt gggtcagccc gctcgaggtg atctcgacga
     4201 agggataagg cgtgccattc gcctcgcggt aaagcgcgcc gatgtggcgg tcgcccgacg
     4261 ggaacacgac gccttcggcc ctggtgtcgc ggatgagctc gaacagacgc tgccgctccc
     4321 tcggcaggtt gccccagcgc tcgaaaccgt gcccctccgc gagcacctgg atcgaggaca
     4381 cgatcaggcg aag
//
LOCUS       DATAIQ010001046         2852 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_73877, whole genome shotgun sequence.
ACCESSION   DATAIQ010001046 DATAIQ010000000
VERSION     DATAIQ010001046.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2852)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2852)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2852
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_73877"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..526
                     /locus_tag="VHN20_17220"
     CDS             <1..526
                     /locus_tag="VHN20_17220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006019161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HEX2727568.1"
                     /translation="LVRTLLSAGLDTTVFTLCNAFTSFARNPGQWALLRDDPSLARQA
                     LEEVLRYDSTFHSFYRTSTQDVELGGITVKQGQKIVVFIASANRDPRRWPEDDRFDIT
                     RRATGHMAFGTGIHGCAGQMMARLEGEIVLTALARRVASIRLDGEPVQHFNNTVRGLK
                     SMPVTVEPLPAAVH"
     gene            565..888
                     /locus_tag="VHN20_17225"
     CDS             565..888
                     /locus_tag="VHN20_17225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012041046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HEX2727569.1"
                     /translation="MPQIVYVQPDGSREAVPASPGATVMMTAVGHGIPGIVAECGGSA
                     MCATCHVYVDPASIGFLPPISDVEDEMLASAAGERREHSRLGCQLALAPGVDQLIVHI
                     PERQV"
     gene            888..2063
                     /locus_tag="VHN20_17230"
     CDS             888..2063
                     /locus_tag="VHN20_17230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX2727570.1"
                     /translation="MAHGTVIVGTGQGGFQLAASLRDSGYADPITLVGDEPGLPYQRP
                     PLSKAFLQGKVDDTGLLLRPPPFYQRIDARVLGGTRVARIDRAARGVHLSSGQTLPYD
                     HLVLATGATARTLCVPGAGLSGVHVLRGLEDARRIREQLARARSVAVVGAGFIGLELA
                     AVARGQGLPMHVIEATARPLLRALSEPMARHLQAFHEAQGTQFHLNTQLDAIEGEDGR
                     ATGLRLHGGGRIVADLIVIAVGVTPNDQLARDAGLAVGNGIEVDELLLTSDAAISALG
                     DCANFPFAADGGSRVRIESVQNAVDQARCIAARLCGQPLPYAKVPWFWSEQGPCRLQM
                     AGLAAPGDRSDIEGDPASGRFSVLRYRGDQLSAVESLNDPAAHMRARTALAPVLAPT"
     gene            2116..>2852
                     /locus_tag="VHN20_17235"
     CDS             2116..>2852
                     /locus_tag="VHN20_17235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006019163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX2727571.1"
                     /translation="MTAASRVIAVTGGASGIGFTFSEALARAGHQVVIADLRGAVEAA
                     ERLSAQGLKAIGTQTDVVKPADVAGMVEQAVKAFGRLDVLVNNAGLFTTLTLKPFDQI
                     SDAEWMRVMEVNTLGPFVCAKAVVPEMRKNGFGRIVNIASTTPIKGTPNMLHYVASKG
                     AVIAFTRSLARELGKDDITVNAIAPGFTLSDGVLDNDLHSKMGDVVRKTSRSLQRDQV
                     PEDLVGALLFLASDGAGFITGQTIAVDG"
BASE COUNT          457 a         1079 c          908 g          408 t
ORIGIN      
        1 gctggttcgc accctgctct ccgccgggct ggacaccacc gtgttcaccc tgtgcaacgc
       61 cttcaccagc ttcgcgcgca accccggtca atgggccctg ctgcgcgacg acccctcgct
      121 ggcgcgccag gcactcgaag aggtactgcg ctacgacagc accttccact ctttctaccg
      181 caccagcacc caggacgtgg aactcggcgg catcaccgtg aagcagggcc agaagatcgt
      241 ggtgttcatc gcctcggcca accgcgaccc gcgccgctgg cccgaagacg accgcttcga
      301 catcacccgc cgcgccaccg gccacatggc cttcggcacg ggcattcatg gctgcgccgg
      361 ccagatgatg gcgcgcctcg aaggcgagat cgtgctcacc gcactggccc gccgcgtggc
      421 ctcgatccgc ctcgacggcg aaccggtcca gcacttcaac aacacggtgc gcgggctcaa
      481 gagcatgccc gtgacggtcg agccgctgcc ggccgccgtg cactgacatc ccgccccatt
      541 cgaactagaa gagagaaacc cacgatgccc cagatcgtct acgtacaacc cgacggctcc
      601 cgagaagccg tgcccgccag tcccggcgct accgtcatga tgaccgctgt cggccacggc
      661 attcccggca tcgtcgccga gtgcggcggc tccgccatgt gcgccacctg ccacgtgtac
      721 gtggacccgg cctcgatcgg cttcctgccg cccatcagcg acgtcgagga cgaaatgctg
      781 gccagcgccg cgggcgagcg ccgcgaacac agccgcttgg gctgccagct cgcgctggcg
      841 cccggcgtgg accagctgat cgtgcacatc ccggagcggc aggtctgatg gcccacggca
      901 ccgtcatcgt cggcaccggg cagggcggct tccagctcgc ggcctcgctg cgcgattcgg
      961 gttatgccga tcccatcacc ctggtcggcg acgagcccgg cctgccttac cagcgccccc
     1021 cgctgtccaa ggccttcctt caaggcaagg tggacgacac cggcctgctg ctgcgcccgc
     1081 ccccgttcta ccagcgcatc gatgcccgcg tgctcggcgg cacgcgcgtg gcgcgcatcg
     1141 accgcgcggc gcgtggcgtg cacctctcca gcggccagac cctgccctac gaccacctgg
     1201 tgctggccac cggcgcgacc gcgcgcaccc tgtgcgtgcc cggagcgggg ttgtcaggcg
     1261 tgcacgtgct gcgcggtctg gaggacgcgc ggcgcatccg agagcaactg gcccgcgcgc
     1321 gctcggtggc cgtggtcggc gccggcttca ttggcttgga actcgcggcc gtggcgcgcg
     1381 gccagggcct gccgatgcac gtgatcgagg ccacggcacg gcccctgctg cgcgccctct
     1441 ccgagcccat ggcgcgacac ctgcaagcct tccacgaagc ccagggcacg caattccacc
     1501 tgaacacgca gctcgacgcc atcgaaggcg aggacggccg cgccaccggc ctgcgcctgc
     1561 acggcggtgg ccgcatcgtc gccgacctca tcgtgatcgc ggtaggcgtc acgcccaacg
     1621 accagctggc gcgcgacgcc gggctggcgg tgggcaatgg catcgaggtc gacgagctgc
     1681 tgctcaccag cgacgccgcc atctccgcgc tcggcgactg cgcgaacttt ccgttcgcgg
     1741 ccgatggcgg ctcccgcgtg cgcatcgagt cggtacagaa cgccgttgac caggcgcgct
     1801 gcatcgccgc gcgcctgtgc ggtcaacccc tgccgtacgc caaggtgccc tggttctgga
     1861 gcgagcaagg cccttgccgg ctgcagatgg ccggcctggc cgcgccgggc gaccgcagcg
     1921 acatcgaggg tgatccggcc agcggccgct tttcggtgct gcgctaccgc ggcgatcaac
     1981 tcagcgccgt cgaatccctc aacgaccctg ccgcccacat gcgcgcgcgc acggccctcg
     2041 cgccggtgct agcaccgacc tgagctccct cagtcccatt cgacatccac acctacccac
     2101 agaaagagac aacacatgac agcagcatcc cgggtcatcg cggtcactgg cggcgccagc
     2161 ggcatcggtt tcaccttctc cgaggccctc gcgcgcgcgg gccaccaggt cgtcatcgcc
     2221 gacctgcgcg gtgccgtcga agcggccgaa cgcctcagtg cccagggcct gaaggccatc
     2281 ggcacgcaga ccgatgtggt caagcccgcc gacgtggcgg gcatggtcga acaggccgtg
     2341 aaggcgttcg gccggctcga cgtgctggtg aacaacgccg gcctgttcac cacgctcacg
     2401 ctcaaaccgt tcgaccagat cagcgacgcc gagtggatgc gggtgatgga ggtcaacacc
     2461 ctggggcctt tcgtgtgcgc caaagcggtc gtgcccgaaa tgcgcaagaa cgggttcggc
     2521 cgcatcgtga acatcgcgtc caccacgccg atcaagggca cgcccaacat gctgcactac
     2581 gtggccagca agggcgcggt gatcgcgttc acgcgctcgc tagcccgcga actcggcaag
     2641 gacgacatca ccgtcaacgc cattgccccg ggcttcacgc tgagcgacgg tgtgctcgac
     2701 aacgacctgc acagcaagat gggcgacgtg gtgcgcaaga ccagccgctc gctgcagcgc
     2761 gaccaggtgc ctgaagacct ggtgggcgcc ctgctcttcc tagccagcga cggcgcgggc
     2821 ttcatcaccg gccagaccat cgccgtcgac gg
//
LOCUS       DATAIQ010001047         2233 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_73965, whole genome shotgun sequence.
ACCESSION   DATAIQ010001047 DATAIQ010000000
VERSION     DATAIQ010001047.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2233)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2233)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2233
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_73965"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            344..1969
                     /locus_tag="VHN20_17240"
     CDS             344..1969
                     /locus_tag="VHN20_17240"
                     /EC_number="5.4.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018386953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016868 - intramolecular
                     phosphotransferase activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-D-glucose phosphate-specific
                     phosphoglucomutase"
                     /protein_id="HEX2727572.1"
                     /translation="MITIVPTRPFNDQNPGTSGLRKAVPVFEQPHYIENFVQAIFDTA
                     DLSGGILVVGGDGRYLNERAVQVILRMAAANEVGRVVVGQNGLLSTPAASALIRERKA
                     QGGIILSASHNPGGPDGDFGIKFNIANGGPAPAGVTNAIYERTLRLTEYRLDDAVQVD
                     VGRLGEQRAGAMIVEVVDPVAQYAALMERLFDFERIAAMFRTGFRMRFDAMHAVTGPY
                     ARAILEGRLGAPAGTVMRGEPLPDFGGLHPDPNPVHAHDLIEALDAPSAPDFGAASDG
                     DGDRNLIVGRGFVVSPSDSLAILAANAHLAPAYAAGLAGVARSMPTSRAADRVAQRLG
                     IRSYETPTGWKFFGNLLDAGLITLCGEESAGTGSNHIREKDGLWAVLMWLNILAVRQE
                     PLAKVLADHWATYGRDYYARHDYEGIDADAAQDVIATLRADLPNLPGRRVGALKVETA
                     DEFTYTDPVDGSVATQQGIRVFFAEGARVVYRLSGTGTSGATLRVYLERYEPEPRLQT
                     QDANVALSELGTLARDLAQLREKTGRTGPSVIA"
BASE COUNT          358 a          772 c          744 g          359 t
ORIGIN      
        1 ccggccgcag ggcgacaccg ccccagccct ttcccggaag ggtggaggga gcgtaaagcg
       61 agcggagccc gatccgggat ctgatccagc caatagcttg ccgcgaagcg gcgctccttt
      121 cctcttcact accgggccgc cgcctgcgcc ggcatcgggg cccggccgcg aagccacaat
      181 gatcgtgagg atcggcgctg cgcagcttct tgtgctgggt cccggatcgc cttccactcc
      241 gctgtaggcg tccgggaaag gggcaggtcg acagagcggc ttcagtgccg gcccggaatg
      301 ctctatgcgt ctcgcgccca acccgctgct gattggatct tgcgtgatca ccatcgtccc
      361 gacccggccg ttcaacgatc agaatcccgg cacctccggc ctgcgcaagg ccgtgccggt
      421 gttcgagcag ccgcactaca tcgagaattt cgtgcaggcg atcttcgaca cggccgatct
      481 cagcggcggc attctggtgg tcggaggcga cggccgctat ctcaacgagc gcgccgtcca
      541 ggtcatcctg cgcatggccg cggccaacga ggtcggccgg gtcgtcgtcg gccagaacgg
      601 cctgttgtcg acccccgcgg catcggcgct gatccgcgag cgcaaggcgc aaggcggcat
      661 catcctgtcg gcgagccaca accccggcgg accggacggc gacttcggca tcaagttcaa
      721 catcgccaat ggcggcccgg caccggccgg cgtgaccaac gcgatctacg agcgcactct
      781 gcgtctgacc gaataccgtc tcgacgacgc ggtccaggtc gacgtcgggc gtcttggcga
      841 acagcgcgcc ggcgccatga tcgtggaggt ggtcgacccg gtcgcgcaat acgccgccct
      901 gatggagcgg ctgttcgatt tcgagcgcat cgccgccatg ttcaggacgg gtttccgcat
      961 gcgcttcgac gccatgcacg cggtgacggg accctatgcg cgcgccatcc tggagggccg
     1021 gctgggcgcg cccgccggga cagtgatgcg cggcgaaccg ctgccggatt tcggcgggct
     1081 gcatcccgat cccaacccgg ttcatgcgca cgacctgatc gaggccctcg acgcgccgtc
     1141 ggcccccgat ttcggggctg catcggatgg cgatggcgac cgtaacctga tcgtcgggcg
     1201 cggctttgtc gtctcgccgt ccgacagcct ggcgatcctt gccgccaatg cgcatctcgc
     1261 gccggcctat gcagcaggcc ttgccggcgt ggcgcgctcg atgccgacca gccgcgccgc
     1321 cgaccgcgtt gcgcagcggc tcggcatccg ttcgtacgag acgccgacgg gctggaagtt
     1381 cttcggcaac ctgctcgatg cgggcctgat cacgctgtgt ggcgaggaaa gcgccggcac
     1441 cggctccaac cacatccgcg agaaggacgg gctttgggcg gtgctcatgt ggctcaacat
     1501 cctcgccgtg aggcaggagc cgctggccaa ggttctggcc gaccactggg ccacctatgg
     1561 gcgcgactat tacgcgcgcc acgactacga aggcatcgac gcggacgcgg cgcaggacgt
     1621 catcgcgacg cttcgggccg atctcccgaa cctcccgggc cgccgcgtcg gcgcgctcaa
     1681 ggtcgagacg gccgacgagt tcacctatac cgatcccgtc gacggcagcg tcgcgacgca
     1741 gcaggggatc cgggtcttct tcgctgaagg cgcgcgggtc gtctaccgcc tgtcggggac
     1801 cggaacctcg ggcgcaacct tgcgcgtcta tctcgagcgc tacgagcctg agccgcgcct
     1861 gcagacgcag gatgccaatg tcgcgttgtc cgagctcggg acgctggcgc gcgacctcgc
     1921 tcagctgcgc gagaagaccg ggcgcacggg gccgtcggtc atcgcgtgaa gatgcgcccc
     1981 aggccgatca cgtcgagcca atgctgtgat atgggtatca ccgccaaacg cggggcgagt
     2041 aaaaacgtga cgtgccggtg accggcccat taaagcaaag ccgtgccatt ctctgcgcga
     2101 gcgtgatcgc gtgcgcctca cttggctacg gctcctcttc gcatgcgcaa aagcggtctc
     2161 tggaggagat tgtcgcggac atcaggcgcc tcgctgaagc accatgcgcc gaccccgtcg
     2221 aggacgtaac tcg
//
LOCUS       DATAIQ010001048         2634 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_359154, whole genome shotgun sequence.
ACCESSION   DATAIQ010001048 DATAIQ010000000
VERSION     DATAIQ010001048.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2634)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2634)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2634
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_359154"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..573
                     /locus_tag="VHN20_17245"
     CDS             <1..573
                     /locus_tag="VHN20_17245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019403765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HEX2727573.1"
                     /translation="PVQVAIFGLAVLGDPLTLAAAAAILIATAGVVTTSLKAGAAAAP
                     GVRPVLLGIVSGGFFALAAISFRGATLALASGSFLTRATTTLVWGLALQTALLVAWLV
                     VFNRAALTGSFRQWRSSLTAGFLGALASQFWFIGFALTSAANVRTLGLVEVPFAYGVS
                     YVVFGHKASPREMIGIALIVTGVALLLTVQ"
     gene            688..1854
                     /locus_tag="VHN20_17250"
     CDS             688..1854
                     /locus_tag="VHN20_17250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019172130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA acetyltransferase"
                     /protein_id="HEX2727574.1"
                     /translation="MSGCIVGWAHTPFGKLDGETVESLVVRVAGEALAHAGIGPEDVD
                     EILLGHFNAGFSPQDFTAALVLQADERFRFKPATRVENACATGSAAVHQALRSIDAKR
                     ARVALVVGVEQMTRTPAAEIGRNLLKASYLPEDGDTPGGFAGVFGKIAASYFQRHGDQ
                     SDALAMIAAKNHRNGVGNPYAQMRKDLGFEFCRQESDKNPFVAGPLKRTDCSLVSDGA
                     AALVIADAEVAATMPRAVAFRATAHAQDFLPMSKRDILKFEGCAEAWRRALGDAGVAI
                     DDLSFVETHDCFTIAELIEYEAMGLAPEGQGARAIKEGWTERGGRLPVNPSGGLKSKG
                     HPIGATGVSMHALAAMQLCNEAGDIQVADATLGGVFNMGGAAVANYVSVLERTR"
     gene            1869..>2634
                     /locus_tag="VHN20_17255"
     CDS             1869..>2634
                     /locus_tag="VHN20_17255"
                     /inference="COORDINATES: protein motif:HMM:NF012471.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004181 - metallocarboxypeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M14 family zinc carboxypeptidase"
                     /protein_id="HEX2727575.1"
                     /translation="MRLPAIFTVLMLIPAAASAQQDDENRTREYSQSPAVRARYADVP
                     IKLDAPGLAAGRDSYTTHEEMIAAVGRIKARARNLHVGSLGTSQEGRDLPYLVFTAEG
                     LSDAAAVKALARPVVWLVGLQHGNEPAGGDAMLALASALADGELKPLLERVTVVIVPR
                     ANPDGAAAFVRGSANGFDLNRDHLLLTLPETRGLHARMTELPPDVVIDAHEFSVANRW
                     IEKFNVLQGADAMFLHATHPAVAKETTGLAENLFRPA"
BASE COUNT          381 a          933 c          912 g          408 t
ORIGIN      
        1 ccggtgcagg tcgcgatctt cggtctcgcc gtgctcggcg atccgctaac gcttgcggcc
       61 gcggctgcga tcctgatcgc aacggccggc gtcgtgacga cgtcgctcaa ggcgggcgcg
      121 gcggcggcgc cgggcgtgcg cccggtgctg ctcggcatcg tctcgggcgg cttctttgcg
      181 ctcgcggcga tcagcttccg gggcgccacc ctggcgctgg catcgggatc ttttctcacg
      241 cgcgcgacca ccacgctggt ctgggggctc gccttgcaga cggctttgct ggtcgcctgg
      301 ctcgtcgtct tcaaccgcgc cgccctgacc ggaagtttcc ggcagtggcg ctcgtcgctc
      361 acggccggct tcctcggcgc gctcgcgtcg cagttctggt tcatcggctt cgcgctgacg
      421 agcgccgcca acgtgcgcac cctcggcctc gtcgaggtgc cgttcgccta cggcgtgtcg
      481 tatgtcgtgt tcgggcacaa ggcgtcgccg cgggagatga tcggcatcgc cctgatcgtc
      541 acgggagtcg cgctgctgct gacggtgcag taagaagggg ccggagcatg atccggcgcg
      601 ccgcaaactt tgcagtcacg gcgcgaccgc cgcgggcggt gcggccgccg cgggcggcgc
      661 ggccggctcg gcatggagga tgacgctatg agcgggtgca tcgtcggttg ggcgcacacg
      721 ccgttcggca agctcgacgg cgagacggtc gaaagtctcg tggtgcgggt ggccggcgag
      781 gcgcttgccc atgccggcat cggccccgag gacgtcgacg agattctgct cgggcatttc
      841 aacgccggct tctcgccgca ggatttcacg gccgcgctcg tgctgcaggc cgacgagcgc
      901 ttccgcttca agccggcgac gcgcgtcgag aatgcctgcg cgaccggctc cgccgccgtg
      961 caccaggccc tcaggagcat cgacgcgaag cgcgcccgcg tcgcgctggt cgtcggcgtc
     1021 gagcagatga cgcggacgcc ggctgccgag atcgggcgca acctcctcaa ggcgtcgtat
     1081 ctgccggagg acggcgacac gcccggcggc ttcgccggcg tcttcggcaa gatcgcggcg
     1141 tcgtatttcc agcgtcacgg cgaccagtcc gacgcgctcg ccatgatcgc cgccaagaac
     1201 caccggaacg gcgtcggcaa tccgtatgcg cagatgcgca aggacctcgg ctttgagttc
     1261 tgccggcagg aatcggacaa gaatccgttc gtcgccggcc cgctcaagcg caccgactgc
     1321 tcgctcgtct ccgacggcgc cgccgcgctc gtcatcgccg atgccgaggt ggcggcgacg
     1381 atgccgcgcg cggtcgcctt ccgggcgacg gcgcacgcgc aggatttcct gcccatgtcg
     1441 aagcgcgaca tcctcaaatt cgaaggctgc gccgaagcgt ggcggcgcgc cctcggcgac
     1501 gccggcgtcg cgatcgacga cctgtccttc gtcgagacgc atgactgctt caccatcgcc
     1561 gagctgatcg aatacgaggc gatgggcctt gccccggaag ggcagggcgc gcgcgccatc
     1621 aaggaaggct ggaccgagcg cggcggcagg ctgccggtca atccgtcggg cggcctcaag
     1681 tccaagggcc acccgatcgg cgccaccggc gtgtcgatgc acgcgctcgc cgccatgcag
     1741 ctctgcaacg aagccggcga catccaggtc gccgacgcga cgctcggcgg cgtcttcaac
     1801 atgggcggcg ccgcggtggc caattacgtg agcgtgctcg agcgcaccag gtagggaagg
     1861 aacgtgccat gcgtcttccg gcgatcttca ccgtattgat gctcatccct gccgccgcat
     1921 cggcgcagca ggacgacgag aaccggacgc gcgaatacag ccagagcccg gccgtgcgcg
     1981 cccgctacgc agatgttccc atcaagctcg acgcgccggg cctcgcggcc ggccgcgaca
     2041 gctacacgac gcacgaggag atgatcgccg ccgtcgggcg catcaaggcg cgcgcccgga
     2101 acctgcatgt cggctcgctc ggcacgtcgc aggaaggacg cgaccttccc tacctcgtgt
     2161 tcacggcgga aggattgtcc gatgcggcgg cggtcaaggc gctggcgcgg ccggtcgtct
     2221 ggctcgtcgg cctgcagcac ggcaacgagc cggccggcgg cgatgcgatg ctggcgctcg
     2281 cctccgccct ggccgacggc gagctcaagc cgctgctcga gcgcgtcacc gtggtgatcg
     2341 tgccgcgcgc caatcccgac ggcgccgcgg ctttcgtgcg cggcagcgcc aacggcttcg
     2401 atctcaaccg cgatcatctc cttctcacgc tgcccgaaac gcgcggcctg cacgccagga
     2461 tgaccgagct gccgcccgac gtcgtgatcg atgcgcacga gttctcggtc gccaaccgct
     2521 ggatcgaaaa attcaacgtg ctgcagggcg ccgacgcgat gttcctgcac gcgacgcatc
     2581 cggccgttgc gaaggagacg acgggcctcg ccgaaaacct gttccggccc gcca
//
LOCUS       DATAIQ010001049         1521 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_267039, whole genome shotgun sequence.
ACCESSION   DATAIQ010001049 DATAIQ010000000
VERSION     DATAIQ010001049.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1521)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1521)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1521
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_267039"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1484
                     /locus_tag="VHN20_17260"
     CDS             <1..1484
                     /locus_tag="VHN20_17260"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX2727576.1"
                     /translation="PASPSLAENLTCDTVIVGSGIAGLSVAYELTRSGHAVIVLDRGP
                     IAGGITSRTTAHLAPVCDDGIDELIKARGDETARLFQESQAAAVDRIEAIVASEAISC
                     GFRRLDGYLFPAMGMSRSDGKAQRDRQYEAARKAQVAAERATGVPLKGFEDAPVVRYP
                     RQATFHPLKYLEGLVAAIKDRGGRLFADTAVTDVAEQDNGVTVTTAKGKTVKARQVVL
                     ATNSPIKDNPAIHDNMAPYRTYAMAFTIPRGTLPDALYWDMADPYHYVRLHPGTGTTD
                     YLIVGGADHKSGEGDDGDVRFEAVEAWTRQLVPDLGREVHRWSGQVLDTPDYCGFIGR
                     DPGSDKIYVVTGDSGQGMTHGALSGLLLRDLIVSGASPWDKVYDPARKISTGVLNYVS
                     ENVSALKSLATHAAPGDLESTDELGPGQGGIMHRGGSKIAACRDLGGKLHMLDAACTH
                     RGCEVQWNSTEQCWDCPCHGSHFAPDGAVLNAPAISPLGKASS"
BASE COUNT          274 a          514 c          498 g          235 t
ORIGIN      
        1 cacccgcgtc tccgtcgctg gccgagaacc tgacatgcga caccgtcatc gtcggctcgg
       61 gcatcgccgg attgtcagtc gcctatgaac tgacccgctc cggtcatgcg gtcatcgtcc
      121 tcgaccgggg cccgatcgcg ggcggcatca cctcgcgcac gaccgcgcat ctcgcgccgg
      181 tctgcgacga cggcatcgat gaattgatca aggcgcgcgg cgacgaaacc gcccgtctct
      241 tccaggagag ccaggcggca gcggtcgacc gcatcgaggc gatcgtcgcg tcggaggcca
      301 tctcctgcgg tttccgccgc ctcgacggtt acctcttccc cgccatgggg atgtcgcgca
      361 gtgacggcaa ggcgcagcgc gaccggcaat acgaggcggc gcgcaaggcg caggtggcgg
      421 cagagcgcgc gacaggcgtg cctctgaaag gcttcgagga cgcgccggtg gtgcgttatc
      481 cgcgccaggc gacgttccac cctctcaagt atctcgaagg tcttgtcgcg gcgatcaagg
      541 accgcggcgg gcgtctgttc gcagacaccg ccgtaaccga cgttgccgag caggacaacg
      601 gcgtcaccgt gaccaccgcc aagggcaaga cggtgaaagc ccggcaggtg gtgctcgcga
      661 ccaactcacc gatcaaggac aacccggcca tccacgacaa catggcgccg taccgcacct
      721 acgccatggc cttcacgatt ccgcgcggca cgctgccgga tgcgctctac tgggacatgg
      781 ccgatccgta ccactacgtc cgtctgcatc cggggaccgg caccacggat tacctgatcg
      841 tcggcggagc cgaccacaag tcgggcgaag gcgacgacgg cgacgtgcgg ttcgaggcag
      901 tcgaagcatg gacgaggcag ctcgttcctg acctcggcag ggaagtccat cgctggtccg
      961 gacaggtttt ggacacgcct gattattgcg gcttcatcgg acgcgatccg ggaagcgaca
     1021 agatctacgt cgtcacgggc gattccggcc agggcatgac ccacggcgcg ttgtccgggc
     1081 ttctgttgcg cgacctgatc gtcagcggcg caagtccctg ggacaaggtc tatgacccgg
     1141 cgcggaagat ctcgacgggc gttctgaact acgtcagcga gaacgtcagc gcgctgaaga
     1201 gcctggccac acacgcagcg cccggcgacc tcgagtcgac cgacgagctc gggcccggcc
     1261 agggcggaat catgcatcgg ggcggcagca agatcgcggc ttgccgcgac ctcggcggca
     1321 agctgcatat gctcgacgcg gcatgcacgc atcgcggctg cgaggtgcag tggaactcga
     1381 ccgaacaatg ctgggattgc ccgtgccacg gctcgcattt cgccccggac ggcgccgtgc
     1441 tcaacgcgcc ggccatctcg ccgctcggca aagcttcttc gtgacgagcg gggtccatgg
     1501 ggatcgaatc aatcccactc t
//
LOCUS       DATAIQ010001050         5670 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_221561, whole genome shotgun sequence.
ACCESSION   DATAIQ010001050 DATAIQ010000000
VERSION     DATAIQ010001050.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 5670)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5670)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5670
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_221561"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..308)
                     /locus_tag="VHN20_17265"
     CDS             complement(<1..308)
                     /locus_tag="VHN20_17265"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEX2727577.1"
                     /translation="MKAQDVMTSPPITVRPDTPVTEIAALLIERRISAVPVVDAAGRM
                     VGIVSEGDLLRRCELGTDRQRSQWLEILVDRDLQAAEFVKAHGMFARDVMTAEVISVP
                     P"
     gene            541..1551
                     /locus_tag="VHN20_17270"
     CDS             541..1551
                     /locus_tag="VHN20_17270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011996140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEX2727578.1"
                     /translation="MKTYTGWSLVKGATAACALAFAWQTVPASAAWQPTRTVEFIIPA
                     GTGGGADQMARMIQGIVQKHNLMPQPLVVINKAGGAGAEGFLDVKGSTRNPHKIIITL
                     SNLFTTPLATGVPFKWEDMSPVAMLALDEFILWVNAKSPYKSAKEYVDAAKAETKKMG
                     GTGSKQEDQIITAAIEQATGAKFTYVPYKGGGDVAAQLVGGHIDSSVNNPIEAVAQWR
                     AGELRPLCVFDSKRIPLKDKVTDTMSWGDIPTCKEQGLDIEYLMMRGIFMSPGATPDQ
                     VAYYVDLFKKVRETPEWKDFMEKGAFNTTFMSGDEYKKWVKDAADTHQKLMEKAGFLA
                     KS"
     gene            1633..2133
                     /locus_tag="VHN20_17275"
     CDS             1633..2133
                     /locus_tag="VHN20_17275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011996141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter TctB
                     family protein"
                     /protein_id="HEX2727579.1"
                     /translation="MAHEADRNEHTVSTRLMELVVAGAFMALSVLIMWDNWRIGARWE
                     DGPQAGYFPFRVGAIMFIASAVTFGVNLFARSGSSNFVERSQLKQVLQVLIPTAVFVA
                     AIGVLGIYVSAAVFITFFMRWLGRYPFTRILPIAILIPVVLFFMFEVWFLVPLPKGPL
                     EEALGY"
     gene            2223..3743
                     /locus_tag="VHN20_17280"
     CDS             2223..3743
                     /locus_tag="VHN20_17280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006021815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HEX2727580.1"
                     /translation="MEALSSLIHGFGVLGDPMNIFYMFLGIFLGVLIGVLPGLGGANG
                     VAILLPLTFSMSPTSAIIMLSSIYWGALFGGAITSVLFNIPGEPWSVATTFDGYPLAQ
                     KGRAGEALTTAFTGSFLGAFVATLLLTFLAPVVARFALQFGPAEFFSVYLLTFCSFIG
                     MGKESPFKILAAMMLGFALAAVGIDTVTGQLRMTFGSHELLRGFDFLIAVIGLFGVGE
                     ILLTMEEGLAFKGKTATINPRVVLHTWKEIPKYWVTAVRGSIVGCWMGITPGGATPAS
                     FMSYGLAKRFSRNGPRFGTGEIEGVLAPETAAHAAGTSALLPMLTLGIPGSPTAAVML
                     GGLLIWGLQPGPLLFVEQKDFVWGLIASIYLGNIAGLIVVLTTVPIFAAILRVPFSII
                     APIILVICAVGAYTVHNALLDISVMLIFGVLGYVFKKLGYPLAPLVLALVLGDMAESS
                     FRQAMLISQGSLTIFWSNPLVGSIVTLALVMLFWPAITITLAKLRARRPPGAVPVK"
     gene            3795..4484
                     /locus_tag="VHN20_17285"
     CDS             3795..4484
                     /locus_tag="VHN20_17285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018387627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEX2727581.1"
                     /translation="MNGDRLKLNIAPIETSVSLRTLAYDALKKAITEMDIYGHLDEIR
                     LDERQLSQDLGVSRTPIREALTVLEQEGFVRAVPRRGIFVVRKSKRQIIEMILVWAAL
                     ESMAARLATQRASDADLEGLRHLFDEFQTEKPEEHPEEYSQANIRFHQKIIQLGGCQL
                     IADMTENLFIHMRAIRAVSMRQQDRAARSIGDHMRIIAALDARDAELAERLVRDHTLG
                     LAAHVERHFPT"
     gene            complement(4526..5236)
                     /locus_tag="VHN20_17290"
     CDS             complement(4526..5236)
                     /locus_tag="VHN20_17290"
                     /inference="COORDINATES: protein motif:HMM:NF020137.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005615 - extracellular space [Evidence
                     IEA];
                     GO_function: GO:0005509 - calcium ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M10 family metallopeptidase C-terminal
                     domain-containing protein"
                     /protein_id="HEX2727582.1"
                     /translation="MLLTGASTLQLLGSRAINGFGDDHNELLIGNSATNILRDNFGND
                     TLKGMGGNDLLFGGKGADRLDGGAGIDLLNGGNGNDLLLGGAGNDVLFGGEDGLPLSG
                     TDHDGLFGGAGNDRLRGGTGHDVLTGGTGADRFIFAKTTDSSPSPFHLSDVIMDFHRA
                     EGDKIDVSGIDPAVPSHAFHFIGTAAFTTSAAAGELRIQAASGETIVQACTTFNHLTP
                     SVIIHVRGDVPNAGDFIL"
     gene            complement(5440..5616)
                     /locus_tag="VHN20_17295"
                     /pseudo
     CDS             complement(5440..5616)
                     /locus_tag="VHN20_17295"
                     /inference="COORDINATES: protein motif:HMM:NF012573.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
BASE COUNT          945 a         1867 c         1831 g         1027 t
ORIGIN      
        1 ggcggcaccg atatgacctc ggcagtcatc acgtcgcggg cgaacatgcc gtgcgccttg
       61 acgaactccg ccgcctgcag gtcgcggtcg accaggatct cgagccattg cgagcgttgc
      121 cggtcggtgc cgagctcgca acggcgcagg agatcgcctt cgctgacgat cccgaccata
      181 cgcccggccg cgtcgacgac gggcaccgca ctgatccgcc gctcgatgag cagcgccgcg
      241 atctcggtca cgggcgtatc cggccgcacg gtgatcggcg ggctcgtcat aacgtcctgc
      301 gctttcatga catctcctcg cgccgctccg gggacgagtg taggccgggt cgcgcgcgtc
      361 ccgccaccag cttcttcgca catgcaaagg gttgcttcgc actgcagcaa aagccgctga
      421 ttttcgcctg tcaatcagtc gtgagttcag ttgcccgcgc cctgatatac aatatactag
      481 cggcaagggg ctgaagaccc gggctggatg aaccagcacg cccacgatgg aggaaactca
      541 atgaaaacat atacgggatg gtcgttggtc aagggtgcga cggcagcgtg cgcgctcgcc
      601 ttcgcttggc agacggtgcc cgcgagcgcc gcctggcagc cgacgcggac cgtggaattc
      661 atcattccgg cgggcaccgg cggcggcgcc gaccagatgg cgcgcatgat ccagggcatc
      721 gtccagaagc acaatctgat gccgcagccg ctggtggtga tcaacaaggc cggcggcgcc
      781 ggcgccgagg gcttcctcga cgtcaagggc tcgacccgca acccgcacaa gatcatcatc
      841 accctgtcga acctcttcac gacgccgctc gccacgggcg tccccttcaa atgggaggac
      901 atgagcccgg tcgcgatgct cgcgctcgac gagttcatcc tgtgggtgaa cgccaagtcg
      961 ccctacaaga gcgccaagga atacgtcgat gccgccaagg ccgagacgaa gaagatgggc
     1021 ggcacgggat cgaagcagga agaccagatc atcaccgctg ccatcgagca ggcgaccggc
     1081 gccaagttca cctacgtgcc gtataagggc ggcggcgatg tcgccgcgca gctcgtcggc
     1141 ggccatatcg actcgagcgt caacaatccg atcgaggcgg ttgcgcaatg gcgcgccggc
     1201 gagctgcggc cgctgtgcgt gttcgactcc aagcgcatcc cgctgaagga caaggtcacc
     1261 gacacgatgt catggggcga cattccgacc tgcaaggagc agggcctcga catcgaatac
     1321 ctgatgatgc gcggcatctt catgtcgccg ggcgcgacgc ccgaccaggt cgcctattat
     1381 gtcgacctgt tcaagaaggt gcgagagacg ccggaatgga aggacttcat ggagaagggc
     1441 gccttcaaca cgaccttcat gtccggcgac gaatacaaga agtgggtcaa ggacgccgcc
     1501 gacacgcatc agaagctgat ggagaaggcc ggcttcctcg ccaagtcctg aacctcgacc
     1561 gccccggcgt gccacccacg ccggggcttt ctttttcaaa ccgataacga cgatttcaca
     1621 ttggggtagg acatggctca tgaagcggac cgcaacgagc acaccgtctc gacgcggctg
     1681 atggagctgg tcgtcgccgg cgcattcatg gccttgtcgg tgctgatcat gtgggacaac
     1741 tggcgcatcg gcgcgcgttg ggaagacgga ccgcaggcgg gctatttccc gttccgcgtc
     1801 ggcgccatca tgttcatcgc cagcgccgtc accttcggcg tcaacctgtt cgcccggagc
     1861 ggctcgtcga atttcgtcga acgctcgcag ctgaagcagg tgctgcaggt cctgatcccg
     1921 acggcggtct tcgtggcggc gatcggcgtg ctcggcatct atgtgtcggc cgccgtgttc
     1981 atcaccttct tcatgcgctg gctgggccgc tatccgttca cgagaatact tccgatcgcg
     2041 atcctgattc cggtcgtgct gtttttcatg ttcgaggtct ggttcctcgt gccgctgccg
     2101 aaaggcccgc tcgaggaagc cctgggctac tgagacattc ataggagccg atccggctgc
     2161 agttgccgga ccggggcgcg gacgcgaccg caagcaacca acaacggggc cgggaggcga
     2221 ccttggaagc actatcgtca ctgatccacg gcttcggcgt gctcggcgac ccgatgaaca
     2281 tcttctacat gttcctcggg atcttcctcg gcgtgctgat cggcgtcctg cccggcctcg
     2341 gcggggccaa cggggtcgcc attcttctgc cgctgacctt cagcatgtcg ccgacgtcgg
     2401 cgatcatcat gctgtcctcg atctactggg gcgcgttgtt cgggggcgcc atcacgtcgg
     2461 tgctgttcaa cattcccggc gagccgtggt ccgtggcgac gaccttcgac ggctatccgc
     2521 tcgcgcagaa gggccgcgcc ggtgaagcct tgacgacggc cttcaccggc tccttcctcg
     2581 gcgccttcgt cgccaccttg ctgctcacgt tccttgcgcc ggtggtcgcg cgcttcgcgc
     2641 tgcaattcgg gccggcggag tttttctccg tctatctcct gacgttctgc agcttcatcg
     2701 gcatgggcaa ggaatcgccc ttcaagatcc tcgccgcgat gatgctcggc tttgcgctcg
     2761 cggcggtcgg catcgacact gtgacgggcc agttgcgcat gaccttcggc tcgcacgagc
     2821 tcttgcgcgg cttcgacttc ctgatcgcgg tgatcggcct gttcggcgtc ggcgagatcc
     2881 tgctcaccat ggaggaaggg ctcgccttca agggcaagac ggcgaccatc aatccgaggg
     2941 tcgtgctgca cacctggaag gaaatcccga aatactgggt gaccgccgtg cgcggctcga
     3001 tcgtcggctg ctggatgggc atcacgcccg gcggcgcgac gccggcatcc ttcatgagct
     3061 acggcctcgc caaacgcttc tcgcgcaacg ggccgagatt cggcaccggc gagatcgagg
     3121 gcgtgctcgc ccccgaaacc gcggcgcatg ccgccggcac gagcgcgctt ctgccgatgc
     3181 tgacgctcgg catccccggc tcgccgacgg cggcggtgat gctcggcggc ctcctgatct
     3241 ggggcctgca gccggggccc ctcctgttcg ttgagcagaa ggatttcgtg tggggcctga
     3301 tcgccagcat ctatctcggc aacatcgcag gcctgatcgt ggtgctgacg acggtgccga
     3361 tcttcgcggc catcctgcgc gtcccgttca gcatcatcgc gccgatcatc ctcgtgatct
     3421 gcgcggtcgg cgcctacacg gtgcacaacg cgctgctcga catctccgtc atgctgatct
     3481 ttggcgtgct cggctacgtg ttcaagaagc tcggctaccc gctggcgccg ctcgtgctgg
     3541 cgctggtgct cggcgacatg gccgagagct cgttccggca ggcgatgctg atctctcaag
     3601 ggagcctcac gatcttctgg tcgaatcccc tcgtcggctc gatcgtcacg ctcgccctgg
     3661 tgatgctgtt ctggccggcg atcacgatca ccctcgccaa gctgcgcgcc aggcgccctc
     3721 ccggcgcggt gccggtcaaa tgactgcctt gaaggcgaag ggcgcaggga cagcggagcg
     3781 agggtgacgc aggcatgaac ggggatcggc tcaagctcaa catcgcgccg atcgagacca
     3841 gcgtcagctt gcgcacgctg gcctacgacg cgttgaagaa ggccatcacc gagatggaca
     3901 tctacggcca tctcgacgag atccggctcg acgagcgcca gctcagccag gacctcggcg
     3961 tcagccgcac gccgatccgc gaggcgctca cggtcctcga gcaggaaggg ttcgtgcgtg
     4021 cggtgccgcg ccgcggcatc ttcgtcgtgc gcaagtcgaa gcgacagatc atcgagatga
     4081 tcctggtctg ggccgcgctc gagagcatgg cggcgcgcct cgccacgcaa cgcgccagcg
     4141 acgccgacct cgaaggcctg cgccacctgt tcgacgagtt ccagacggag aagccggaag
     4201 agcatcccga ggaatactcg caggccaata tccgctttca ccagaagatc atccagctcg
     4261 gcggctgcca gctgatcgcc gacatgaccg agaacttgtt catccacatg cgcgcgatcc
     4321 gcgccgtgtc gatgcgccag caggatcgcg ctgcgcgctc gatcggcgat cacatgcgca
     4381 tcatcgccgc gctcgacgcg cgcgacgccg agctcgccga gcgcctcgtc cgcgaccaca
     4441 ccctcggcct cgccgcccac gtcgagaggc acttcccgac gtagcgtcta accctcttcc
     4501 cgacggggag agggatgcgc agcggtcaga ggatgaaatc gccggcgttc gggacgtcgc
     4561 ccctgacatg gatgatgacc gaaggcgtca ggtggttgaa ggtggtgcag gcctgcacga
     4621 tggtttcgcc cgacgccgcc tgaatccgta actccccggc cgctgcggag gtcgtgaacg
     4681 ccgccgtgcc gatgaaatga aaggcgtggc tcggcacggc cgggtcgatt cccgacacgt
     4741 cgatcttgtc gccttcggcg cggtggaagt ccatgatcac gtcggagagg tggaatggcg
     4801 acgggctgct gtccgtcgtc ttcgcgaaga tgaaccggtc ggcccccgtg ccgccggtga
     4861 gcacgtcgtg tcccgtgccg ccacggagcc tgtcgttgcc ggcgccgccg aacagcccgt
     4921 cgtggtccgt gccgcttaac ggcagaccgt cctctccgcc gaacaggacg tcgttgccgg
     4981 ccccgccaag aagaaggtcg ttgccgttgc cgccgttgag caggtcgatg ccggcgccgc
     5041 cgtcgagcct gtcggcgccc ttgcctccga agagcaggtc gttcccgccc atccctttga
     5101 gggtgtcgtt gccgaaattg tcgcggagga tgttggtggc gctgttgccg atgagcagtt
     5161 cgttgtgatc gtcgccgaag ccgttgatgg ccctcgagcc cagaagctgg agcgtgctcg
     5221 cgcccgtgag gagcaggctg aaggtgcggt gctgcggacc gtatcgcccg ggccggcgaa
     5281 caccttgtcc gcccggttgt cgacgatgaa ggtgtcgtgg ccgatgccgc cgaacatgcg
     5341 gtcggcgtcg gtgccgccgt cgagcaggtt gttgccggcg cccccgatga gaacgtcctt
     5401 gcctgcgccg ccgaacaaac ggtcgttgcc aaggccgcca tcgaggaaat cgttgccgag
     5461 gctgccgaac aggaagtcgt tgcccgttcc gccgtccagg ttgtcgttgc cggcgaggcc
     5521 gaacagccgg tcgttgccgc cctggccgtc gatctggtcc gccaagttgg tgccgatgag
     5581 ggtgttattg ccggcattgc cgtggataat cgccatgagc gtcctcctgg ggccgcggtt
     5641 gctttgaaat gctactccta ttccagacgc
//
LOCUS       DATAIQ010001051         3775 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_359416, whole genome shotgun sequence.
ACCESSION   DATAIQ010001051 DATAIQ010000000
VERSION     DATAIQ010001051.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3775)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3775)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3775
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_359416"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..268
                     /locus_tag="VHN20_17300"
     CDS             <1..268
                     /locus_tag="VHN20_17300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012384561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="sulfate transporter subunit"
                     /protein_id="HEX2727583.1"
                     /translation="VDGNVDAKGTRKVAQAYLEFLYGPKAQAIIARNFYRPVKPEHAA
                     KEDLDRLPKLSLFTIDDVFGGWTKVQKEHFSDGGVFDQIVKANR"
     gene            276..1154
                     /gene="cysT"
                     /locus_tag="VHN20_17305"
     CDS             276..1154
                     /gene="cysT"
                     /locus_tag="VHN20_17305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020178437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015419 - ABC-type sulfate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008272 - sulfate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter permease subunit CysT"
                     /protein_id="HEX2727584.1"
                     /translation="MSAALTLSATPHRRATWRVTPASAIPGFGIAFGYAILYLALIVL
                     LPLAALVLKASAMGLAGWWAAVSDERVVAALKTSFGISLAAAGVDSVFGLLVAWVLTR
                     YRFAGRKILDATIDLPFALPTAVAGIALAAIYAPNGWIGRLVEPLGIKIAFTPLGIFV
                     ALVFVGLPFAVRAVEPLIAELDRELEEASATLGATRRQTVWKVVIPPLIPAVITGFAL
                     AFARAVGEYGSVIFIAGNMPYVSEIAPLLIVIKLEEFNYGGATAIATIMLAISFATLL
                     LINLLQAYSRRRYGHG"
     gene            1147..1890
                     /gene="cysW"
                     /locus_tag="VHN20_17310"
     CDS             1147..1890
                     /gene="cysW"
                     /locus_tag="VHN20_17310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012335178.1"
                     /note="Part of the ABC transporter complex cysAWTP
                     involved in sulfate/thiosulfate import; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/thiosulfate ABC transporter permease
                     CysW"
                     /protein_id="HEX2727585.1"
                     /translation="MAESTVSPVAITETRFTRVVLTSTVLAFLGLFLLLPLAAVFVQA
                     FGKGAIAYLDAFRDPDALAAIRLTLTVALIAVPRNLVFVLLFGAQGLFGAWLQAHGLE
                     IVFALPGIVLATVFVTFPFVARELIPLMQEQGRGDEEAALTLGASGLKAFVTVTLPNI
                     KWALLYGVLLCNARAMGEFGAVAVVSGHIRGLTNTMPLQVEILYNEYNFVGAFAVASL
                     LAFLALLTLAAKSVLEWHYGDALSGRPAH"
     gene            1856..2962
                     /locus_tag="VHN20_17315"
     CDS             1856..2962
                     /locus_tag="VHN20_17315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012335177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/molybdate ABC transporter ATP-binding
                     protein"
                     /protein_id="HEX2727586.1"
                     /translation="METLSPAVRPIEWKDAIEVRVAGIVKEFGDAAALRGVSLDVRAG
                     ELMALLGPSGSGKTTLLRIIAGLEIAEAGQVFFGGEDATRLSVQRRGIGFVFQHYALF
                     KHLTVSDNIAYGLRVRPRATRPQEADIRRRVQDLLELVQLEGLGARFPAQLSGGQRQR
                     VALARALAVEPRLLLLDEPFGALDAKVRKELRRWLRELHECTGKTTIFVTHDQDEALE
                     LADRVAVLNHGLLEQVGTPDEVQHQPASPFVMTFLGDTARFQARVADGRAVISGHTTG
                     IPVPDRIAGEVTVYCRPWDLRIVAREGADIGGTVHAVRRVGGIRRVEVDVPEAGRIEV
                     QAPGSWDCRPGDEVGIVIDQARLFPAGQVGGTTV"
     gene            3266..>3775
                     /locus_tag="VHN20_17320"
     CDS             3266..>3775
                     /locus_tag="VHN20_17320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hybrid sensor histidine kinase/response
                     regulator"
                     /protein_id="HEX2727587.1"
                     /translation="MQTIERTIAETNEILRGSSDEEIRRDEERFSRRLLLSHEALPQM
                     QSIWAFARDGRPLVSSTIYPVPPTLNNSDRDYFRAQSEGRAGTFIGDIVRARVGSLRF
                     FVVSGRRPETPEGEFNGVIGVTVLPEHFRAFYGRLSRGVADSFGLVRSDGAYLARYPA
                     ILDRPERLSP"
BASE COUNT          548 a         1281 c         1242 g          704 t
ORIGIN      
        1 cgtcgacggc aacgtcgacg ccaagggcac gcgcaaggtg gcgcaggcct atctcgaatt
       61 cctctacggc ccgaaggcgc aggccatcat cgcccggaat ttctatcggc cggtcaagcc
      121 cgagcatgcc gccaaggagg atctcgaccg cctgcctaag ctcagtctct tcaccatcga
      181 cgacgtgttc ggcggctgga ccaaagtcca gaaggagcac ttcagcgacg gcggcgtatt
      241 cgaccagatc gtcaaggcga accgctgatc cggacatgag cgctgcgctg accctgtcgg
      301 ccacgccgca ccgccgtgcg acatggcggg tgacgccggc gagtgcgatc ccgggattcg
      361 gcatcgcatt cggctacgcc atcctctacc tggcattgat cgtgctgctg ccgctggcgg
      421 cgctcgtgct caaggcgtcc gccatgggcc ttgcggggtg gtgggccgcg gtcagcgacg
      481 agcgcgtcgt ggccgcgctg aagaccagct tcggcatctc cctcgccgcg gcgggcgtcg
      541 attcggtctt cggcctgctc gtcgcctggg tcctgacgcg ctaccgcttt gcaggccgca
      601 agatcctcga tgcgacgatc gatctgccct ttgccttgcc caccgccgtg gcgggcatcg
      661 cgctcgcggc tatctatgcg cccaacggct ggatcgggcg gctggtcgag ccgctcggaa
      721 tcaagatcgc cttcacgccg ctcggcatct tcgtggcgct cgtcttcgtg gggctgcctt
      781 ttgcggtgcg cgccgtcgag ccgctcatcg ccgagctgga ccgcgagctc gaggaggctt
      841 cggcgaccct cggagcgacg cgccgacaaa ccgtctggaa ggtggtgatc ccgcccctga
      901 tcccggcggt catcacgggc ttcgcgctcg ccttcgcgcg cgccgtcggc gaatacggct
      961 cggtgatctt catcgccgga aacatgccgt atgtgtccga aatcgcgccg ctgctgatcg
     1021 tcatcaagct tgaggagttc aactacggcg gcgcgacggc aatcgccacg atcatgctgg
     1081 cgatctcctt cgcgacgctt ctcctgatca atctcctgca ggcctacagc cggaggaggt
     1141 acgggcatgg ctgagagcac cgtgtctccc gtcgcgatca ccgagacgcg gttcacgcgc
     1201 gtcgtgctga cctcgaccgt ccttgccttc ctggggctgt ttctgctgct cccgctcgcc
     1261 gccgtgttcg ttcaggcctt cggcaagggc gcgatcgcct atctcgatgc gttccgcgac
     1321 cctgacgcgc tcgccgccat ccgcctgacg ctgacggtgg cgctgatcgc cgttccgcgg
     1381 aacctcgtct tcgtgctgct gttcggcgcg caggggctct tcggcgcctg gctgcaggcg
     1441 catgggctcg agatcgtgtt cgcgctgccc ggcatcgtgt tggcgaccgt gttcgtcacg
     1501 ttcccgttcg tcgcccgcga gctgatcccg ctgatgcagg agcagggaag gggcgacgag
     1561 gaggcggcgc tcacgctcgg cgcgtcgggc ctgaaagcct tcgtcaccgt gacgctgccc
     1621 aacatcaaat gggcgctgct ctacggcgtg ctgctgtgca acgcgcgcgc catgggagag
     1681 ttcggcgctg tcgcggtcgt gtcggggcat atccgcgggc tcaccaacac catgcctctg
     1741 caggtggaga ttctttacaa tgagtacaat ttcgtcggcg cttttgccgt cgcctcgctc
     1801 ctcgctttcc ttgccctcct cacgctcgcc gcaaaatccg tcctcgaatg gcattatgga
     1861 gacgctctct ccggccgtcc ggcccattga gtggaaggat gcaatcgaag ttcgcgtcgc
     1921 cggcatcgtc aaggagttcg gcgacgcggc ggcgttgcgg ggggtcagcc tcgacgtgcg
     1981 tgccggagag ctgatggcgc ttctcggacc gtccggctcc ggcaagacga ccttgctgcg
     2041 catcatcgcc ggactcgaga tcgccgaagc cggccaggtc ttcttcggcg gcgaggacgc
     2101 taccagattg agcgtgcagc gccgcggcat cggcttcgtc ttccagcatt atgccctgtt
     2161 caagcacctc accgtgtccg ataacatcgc ctacgggctg cgcgtgcggc cgcgggcaac
     2221 ccggccgcag gaggccgaca tccgacgccg cgtgcaggat cttctcgagc tcgtgcagct
     2281 ggaagggctc ggcgcgcgct ttccggccca gctctcgggc ggccagcgcc agcgggtggc
     2341 gctggcacgc gccctcgccg tcgagccgcg cctgctgctg ctcgacgagc cgttcggcgc
     2401 gctcgacgcc aaggtgcgca aggagttgcg gcgctggctg cgcgagctcc acgagtgcac
     2461 cggcaagacc acgatctttg tcacccacga ccaggacgag gcgctcgagc tggccgatcg
     2521 cgtcgcggtc ctgaaccacg gattgctcga gcaggtggga acgccggacg aggtccagca
     2581 ccagcctgca tcgccattcg tgatgacgtt tctgggtgat acggcccgct tccaggcgcg
     2641 ggtcgcggat gggcgggcgg tcatcagcgg gcacacgacc ggcattcccg tgccggaccg
     2701 catcgccggc gaggtcaccg tttattgccg cccctgggac cttcgcatcg tcgcccgcga
     2761 gggcgccgac atcggcggta ccgtccatgc ggtccgccgc gtcggcggca tccggcgcgt
     2821 cgaggtcgac gtccccgaag ccggtcgcat cgaggtgcag gcgccgggct cgtgggactg
     2881 ccggcccggg gacgaggtgg gcatcgtcat cgaccaggcc cgtctgttcc cggcaggtca
     2941 ggttggtgga acgacggtgt gactttcatg cccgggcatg gccgggcgca tgccctggga
     3001 tggctcggcc ggcgcgttaa cgttttggtt tgtagggtgt cgtccggccg ttcctcccag
     3061 cgacattgct tgctagaaac gcggcatgtc gagagggaag tcgaatcttt tctggccgct
     3121 tcgcgtgatc gctgcggcaa gcatcatcgg cccggccctg ctgttcgcat acgcgagctg
     3181 gggcaactac cgctccatcc agcagcgcac cgctgaacgt atcgagagcg ccctcgacgt
     3241 gatccaggag catgcactca aggccgtgca gacgatcgag cgcacgatcg ccgaaaccaa
     3301 cgagatactc cgcggctcct ccgacgagga gatacgccgt gacgaggagc gcttttccag
     3361 gcgcctgctg ctcagtcacg aagcattgcc gcaaatgcaa tcgatctggg cgtttgcccg
     3421 tgacgggcgg ccgctcgtct cgagcacgat ctatcccgtc ccccccacct tgaacaattc
     3481 cgaccgggat tattttcgcg cgcagtcaga aggacgggcg ggcacattca tcggcgacat
     3541 cgttcgcgcg cgggtcggct ccttgcgctt ctttgtcgtg agcggccgcc gtccggagac
     3601 gcctgaaggc gagttcaacg gcgtgatcgg cgtcacggtg ctgcccgagc actttcgcgc
     3661 cttctatggc cgcctgtcgc gcggggtggc ggattcgttc gggctggtga gaagcgacgg
     3721 cgcctacctt gcccgctacc cggccattct cgaccgtccc gagcgtctga gcccg
//
LOCUS       DATAIQ010001052         2084 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_221870, whole genome shotgun sequence.
ACCESSION   DATAIQ010001052 DATAIQ010000000
VERSION     DATAIQ010001052.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2084)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2084)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2084
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_221870"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..418)
                     /locus_tag="VHN20_17325"
     CDS             complement(<1..418)
                     /locus_tag="VHN20_17325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003602503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Mur ligase domain-containing protein"
                     /protein_id="HEX2727588.1"
                     /translation="MKLPPKLGPIHFIGIGGIGMSGIAEVMHNLGYTVQGSDAADNYN
                     VRRLAEKGIRTFVGHRVENVDGAEVVVVSTAIKRDNPELAIARERRLPVVRRAEMLAE
                     LMRFKSCVSIAGTHGKTTTTSLVATLLDAGGLDPTVI"
     gene            complement(415..1536)
                     /gene="murG"
                     /locus_tag="VHN20_17330"
     CDS             complement(415..1536)
                     /gene="murG"
                     /locus_tag="VHN20_17330"
                     /EC_number="2.4.1.227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018041922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050511 -
                     undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HEX2727589.1"
                     /translation="MSGRPLILVAAGGTGGHLFPAESLAVALARRDVRIALASDDRVG
                     DISASFPAETVVKIPAATPSGGSPVQRARAALVLGLGTLRALQALRRLRPDAVIGFGG
                     YPTVPPLIAASLLRIPTVIHEQNGVIGRANRFLAPRVSLIATGFAQVRGVPATAARMV
                     HTGNPVRPAVLAAAQVPYPAALPDGSVKLLVFGGSQGARVMSDIVPAAIAQVPDELRR
                     RLVITQQARQEDLARVRQAYAALGVAADVQSFFKDLPQRMADAHLVVSRSGASTVAEL
                     SVVGRPAILVPLPGALDQDQAANAQSLAAIGAATMINQDAFTPERLAGELIDYLKNPE
                     NLTRAAAAAKSAGINDAAERLAAEVVRLAAARPSDENRP"
     gene            complement(1533..>2084)
                     /locus_tag="VHN20_17335"
     CDS             complement(1533..>2084)
                     /locus_tag="VHN20_17335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019403407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsW/RodA/SpoVE family cell cycle protein"
                     /protein_id="HEX2727590.1"
                     /translation="GLVGIGFAYKFMPHVRGRIERFIDKSSGDSFHVDTAMEAFAQGG
                     WFGKGPGEGSVKRILPDAHTDFIFAVTAEEFGIAVCIAIVLLFAFIVLRGFVLARRNE
                     DSFCKLAVAGLLLMFGLQALINMAVNVNVIPAKGMTLPFISYGGSSLVSLALGMGFLM
                     ALTRRRPRAELFDGMGSRTSAAR"
BASE COUNT          344 a          716 c          735 g          289 t
ORIGIN      
        1 tgatgaccgt cgggtcgagc ccgccggcat cgagcagcgt cgcgaccagc gaggtggtcg
       61 tcgtcttgcc atgcgtgccg gcgatcgaca cgcagctctt gaagcgcatc agctcggcca
      121 gcatctcggc ccggcgcacc accggcagcc ggcgctcgcg ggcgatcgca agctccgggt
      181 tgtcgcgttt gatggcggtc gaaaccacga ccacctcggc gccgtcgaca ttctcgacgc
      241 ggtggccgac gaaggtgcgg atgcctttct cggccaggcg cctgacgttg tagttgtcgg
      301 cggcgtccga cccctgcacc gtgtagccga gattgtgcat cacctcggcg atgccggaca
      361 tgccgatccc gccgatgccg atgaaatgaa tggggccaag cttgggcggc agtttcatgg
      421 gcggttctcg tcggatggcc tggcggcggc gagtcgaacg acctcggcgg caagccgctc
      481 ggccgcgtca ttgatccccg cgctcttggc cgctgccgcc gcccgggtca agttttccgg
      541 gttcttaagg taatcaatca gttcgccggc aagccgctcc ggggtaaacg cgtcctggtt
      601 aatcattgtg gcggccccga tggcagccag ggactgggca ttggccgcct ggtcctggtc
      661 gagcgcgccg ggaagcggca cgaggatggc cgggcgtccg accaccgaga gctcggctac
      721 cgttgacgcg cccgagcgcg acacgaccag atgcgcgtcg gccatgcgct gcggcaggtc
      781 cttgaagaag gactgcacgt cggcggccac gcccagcgcc gcataggcct gccgcacgcg
      841 cgcgagatcc tcctggcgcg cctgctgcgt gatcaccagc cggcgccgca gctcgtccgg
      901 gacctgcgcg atggcggcgg gcacgatgtc gctcatcacg cgggcgccct ggctgcctcc
      961 gaacacgaga agcttgacgc tgccgtcggg caacgcggcc ggatacggaa cctgcgccgc
     1021 ggcgagcacc gccggccgaa cggggttgcc ggtatggacc atgcgggcgg ccgtggcggg
     1081 aacgcccctc acctgcgcga agccggtcgc gatcagcgac acgcgcggcg ccaggaaacg
     1141 gttggcgcgg ccgatcacgc cgttctgctc gtggatcacg gtcggaatgc gcagcagcga
     1201 tgcggcgata agcggcggca ccgtcggata gccgccgaaa ccgatcacgg cgtcgggccg
     1261 cagccggcgc aaggcctgca gcgcccgcag ggtgccgagc ccgagcacca gcgccgccct
     1321 ggcgcgctgc acgggcgagc cgcccgacgg ggtcgccgcc ggaatcttga cgaccgtctc
     1381 ggccggaaag ctggccgaga tgtcgccgac gcgatcgtcg ctggcgagcg cgatgcgcac
     1441 gtcgcgccgc gccagcgcaa cggcgagcga ctcggccgga aagagatggc cgccggtgcc
     1501 gccggcggcg accaggatga gagggcggcc gctcatcgcg ccgccgacgt gcgcgagccc
     1561 atgccgtcga acagttcagc ccgtggacgc cgccgcgtga gcgccatcag gaagcccatc
     1621 cccagagcca acgacaccag cgacgagccg ccataggata tgaagggcag cgtcatcccc
     1681 ttggccggga tcacgttgac gttcaccgcc atgttgatca gcgcctgcag gccgaacatc
     1741 agcagcaggc cggcgaccgc cagcttgcag aagctgtcct cgttgcggcg ggccagcacg
     1801 aagccgcgca gaacgatgaa cgcgaagagc aggacgatgg cgatgcagac ggcgatgccg
     1861 aactcctccg ccgtcaccgc gaagatgaag tcggtatgcg cgtcggggag gatgcgcttg
     1921 accgatccct cgcccggccc cttgccgaac cagccgccct gggcgaaggc ttccatggcg
     1981 gtgtcgacgt ggaaggaatc gcccgacgac ttgtcgatga agcgttcgat gcggccgcgc
     2041 acgtgcggca tgaacttgta ggcgaacccg atgcccacga ggcc
//
LOCUS       DATAIQ010001053         1601 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_267747, whole genome shotgun sequence.
ACCESSION   DATAIQ010001053 DATAIQ010000000
VERSION     DATAIQ010001053.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1601)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1601)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1601
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_267747"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1478)
                     /locus_tag="VHN20_17340"
     CDS             complement(<1..1478)
                     /locus_tag="VHN20_17340"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014492550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-transferase"
                     /protein_id="HEX2727591.1"
                     /translation="MKVVSASEAASLIQPGDSVLVSGSGGGHSVPEAILEAIESRFLE
                     TGAPRDLCLIHAVGIGDRKLKGAARFRHPGMLRRSITGALVDSPPLIDLAKNDEIESY
                     TLPQGVIAQMMREIAAGRPGLITRTGLHTFVDPRQRGGRQSPSAREDLVEVITIGGEE
                     WLRFKPFPLDVVLLRGTTADEDGNVSMEQEAVPGEMLSSAQAGRRLGAAVVVQVKRLA
                     RRGTLCPRDVKIPGVLVDYIVVDENQRQTYWSDYNPSYAGELRIPWEGMRKLPFTERK
                     IVARRAAMEITPGAICNLGAGISTGVSAVAAEEGFLDEIVLTNEQGFIGGAPLTGPDS
                     GAAQNYDAVVDQPYQFDFYDGGGLDIAFLSFAEVDSDGHVNVSRFGDTIVGIGGFVNI
                     SQNARKVVFSATFTAGGLQVAASDGHLRILQEGRSRKFVQHVEQICYNGAFARSQGRE
                     AVFVTERAVFRVGDTGLELCEIAPGIDLERDIIANMAFRPAIA"
BASE COUNT          272 a          539 c          508 g          282 t
ORIGIN      
        1 gctatcgcgg gccggaacgc catgttggcg atgatgtccc gctcgagatc gatccccggg
       61 gcgatctcgc agagctcgag ccctgtgtcg cccacgcgga agacggcccg ctcggtcacg
      121 aacaccgcct cgcgcccctg cgagcgcgca aacgcgccat tgtagcagat ctgctcgaca
      181 tgctggacga acttgcggct gcgaccttcc tgaaggatcc gcaaatgccc gtccgacgcc
      241 gcgacctgca ggccgcctgc cgtgaaggtc gcgctgaaca ccactttgcg cgcattctgg
      301 ctgatgttca cgaagccgcc gatgccgacg atcgtgtctc cgaagcggct cacattgaca
      361 tgcccgtcgc tgtcgacctc ggcgaaggag aggaaggcga tgtcgaggcc gccgccatca
      421 tagaagtcaa attggtaagg ctgatcgacc acggcgtcgt aattctgcgc cgcgcccgaa
      481 tccggaccag tcaggggagc gccgccgatg aagccttgtt cgttggtgag cacgatctcg
      541 tcgaggaagc cctcttcggc ggcgacggcg gaaacgccgg tcgagatgcc ggcgccgaga
      601 ttgcatatcg cccccggcgt gatctccatg gcggcacgcc gcgcgacgat cttgcgctcg
      661 gtgaagggca gcttgcgcat gccttcccag gggatgcgca actcgccggc atagctcgga
      721 ttgtagtcgc tccagtaggt ctggcgctgg ttttcgtcga cgacgatata gtcgaccagg
      781 acgcccggga tcttgacgtc gcgcgggcac aacgtgccgc gcctggcgag gcgcttgacc
      841 tgaaccacca ccgctgcgcc gagccgccgg cccgcctggg ccgaggacag catctcgccc
      901 ggcaccgcct cctgctccat gctgacattg ccgtcctcgt cggccgtcgt gccgcgcagc
      961 aggacgacgt ccagggggaa cggcttgaag cgaagccact cctcgccgcc gatcgtgatg
     1021 acctcgacaa ggtcctcccg cgcactcggg ctttgccggc ccccacgctg ccgaggatcg
     1081 acgaaggtgt gaaggccggt cctcgtgatc aggccaggcc tgccggccgc gatctcgcgc
     1141 atcatctgcg cgatcacgcc ttgtggcagc gtgtaggact cgatctcgtc gtttttcgcc
     1201 agatcgatca ggggcggcga atcgaccagc gcgccggtaa tgctgcgcct gagcatgccc
     1261 ggatgccgga agcgtgccgc gcccttgagc tttctgtcgc cgatgccgac tgcatggatg
     1321 agacaaagat cgcgcggcgc cccggtctcc aggaagcgtg attcaatcgc ctcgaggatt
     1381 gcctccggca cgctgtgacc acctcctgaa ccgctgacga gcacgctgtc gccgggctgg
     1441 atgagcgagg ctgcttcgct cgcgctgacc accttcatgc tgccgctccg gatattcctt
     1501 gcgccgttcc ggattgactt tcacggcaca aattgtaacc ggttgcatag agattggagc
     1561 gccggcatgt caagccgcag gaaccggaag cagcgccgtt c
//
LOCUS       DATAIQ010001054         1777 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_267826, whole genome shotgun sequence.
ACCESSION   DATAIQ010001054 DATAIQ010000000
VERSION     DATAIQ010001054.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1777)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1777)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1777
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_267826"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..284
                     /locus_tag="VHN20_17345"
     CDS             <1..284
                     /locus_tag="VHN20_17345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007566723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX2727592.1"
                     /translation="GFISIAAPANRFDFTFLAPCPSSGLFVHGSEDRVAPVKDVVSVI
                     EKVKTQKGIQIEHQVVEGANHFFEGRVEELMATVDTYLDKKIGKVEAAA"
     gene            complement(291..1394)
                     /locus_tag="VHN20_17350"
     CDS             complement(291..1394)
                     /locus_tag="VHN20_17350"
                     /EC_number="2.7.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020092047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009254 - peptidoglycan turnover [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anhydro-N-acetylmuramic acid kinase"
                     /protein_id="HEX2727593.1"
                     /translation="MAILRAIGLMSGTSLDGVDIALVETDGERVERLGPTGYRAYSDD
                     DRVVLHGALADAVRIAARGDRPGRCRAAEELITRRHAEAVEGFLRDQGLAPETIDLIG
                     FHGQTVLHRPEAQLTVQLGDGEALAARLHIPVVYDFRAADMKAGGQGAPLVPVFHRAL
                     VDAAGLERPVAVLNLGGVANVTLVGADDQLVAFDTGPGNALIDDWMREQTGRAFDEDG
                     RSAAHGRADAKLVAKLLEDPFFQQPPPKSLDRNRFSRQLFARQNVEDGAATLTAFTAR
                     AVARAADFMPEAPKRWIVAGGGVRNRELLRLLGSELAAPLITADAVGWSAEFLEAQAF
                     AYLAVRSRKGLPLTFPGTTGIAAPTTGGVLARP"
     gene            complement(1408..>1777)
                     /locus_tag="VHN20_17355"
     CDS             complement(1408..>1777)
                     /locus_tag="VHN20_17355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006019024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="solute carrier family 23 protein"
                     /protein_id="HEX2727594.1"
                     /translation="GVSAGGRTGLTAVVVSLLFLLALFFSPLAGMVPPYASAAALLFV
                     ACMMARGLAEIDWNDPTEYAPAVVTAVTMPLTYSIATGIGLGFITYALVKILSGRLRE
                     ASLAVVGLAVIFALKFALVG"
BASE COUNT          311 a          609 c          612 g          245 t
ORIGIN      
        1 agggtttcat ctccatcgcc gccccggcca accgcttcga cttcaccttc ctggctccct
       61 gcccgtcctc gggcctgttc gtgcacggct ccgaggaccg ggtcgccccg gtcaaggacg
      121 tggtcagcgt catcgagaag gtgaagaccc agaagggcat tcagatcgag caccaggtgg
      181 tggagggcgc caaccacttc ttcgaagggc gcgtcgaaga gctcatggca accgtcgaca
      241 cctatctcga caagaagatc ggcaaggtcg aagcggcggc gtaaagcctg tcagggtctt
      301 gccagcacgc cgccggtcgt cggcgcggcg atcccggtgg tgcccggaaa ggtgagcggc
      361 aagcccttgc ggctgcgcac cgccagatag gcgaaggcct gcgcctccag gaattcggcg
      421 gaccagccga ccgcgtcggc ggtgatcagc ggcgccgcga gctcactgcc gagaagcctc
      481 agaagctcgc ggttgcggac ccctcccccg gccacgatcc aacgcttcgg cgcctccggc
      541 atgaagtcgg cggcgcgcgc cacggcgcgg gcggtgaagg cggtcagggt tgccgcgcca
      601 tcttcgacat tctgtcgtgc aaaaagctgg cgggagaagc ggttgcggtc gagcgatttc
      661 ggcggcggtt gctggaaaaa cggatcctcc agcagcttcg caacaagctt cgcgtcagcc
      721 cggccgtggg cggcgctgcg cccgtcctcg tcgaaggcgc gcccggtctg ctcgcgcatc
      781 cagtcgtcga tcagcgcgtt gccggggccg gtgtcgaagg cgacgagctg atcgtcagcg
      841 ccgaccagcg tcacgttcgc gaccccaccg aggttgagca ccgcgacggg cctctcgagg
      901 ccggcggcgt cgacgagggc gcgatgaaac accggcacga ggggcgcgcc ctgccccccc
      961 gccttcatgt cggcggcacg gaagtcatag acgaccggga tgtgcagccg cgcagccagc
     1021 gcttcgccat cgcccagctg cacggtgagc tgcgcctccg gacgatgcag cacggtctgg
     1081 ccgtggaatc cgatcaggtc gatcgtctca ggtgcaaggc cctggtcccg caaaaatcct
     1141 tcgacggctt cggcatgccg ccgcgtgatg agctcctcgg cggcacggca gcgccccggg
     1201 cgatcgccgc gcgcggcgat ccgcacagcg tcggccaggg cgccgtggag caccacgcgg
     1261 tcgtcgtcgc tatatgcgcg gtaacccgtg ggaccgagcc gctcgacgcg ctcgccgtcc
     1321 gtctcaacca gcgcgatgtc gacgccgtcg agcgacgtgc cgctcatcag tccgatggcc
     1381 cgcaggattg ccacgacgcc tccttcctca gccgaccaac gcgaacttca acgcgaagat
     1441 cacggcgagg ccgacaaccg cgagcgacgc ctcgcgcagg cgcccggaga ggatcttgac
     1501 gagcgcgtag gtgatgaagc cgagcccaat gccggtggcg atggaataag tgagcggcat
     1561 ggtcacggcc gtgaccacgg ccggcgcgta ttcggtgggg tcgttccaat cgatctcggc
     1621 gaggccccgc gccatcatgc aggccacgaa caagagcgcg gccgccgagg cataaggcgg
     1681 gaccatcccg gcgagcggtg agaaaaacaa ggcgagaagg aacaggagcg agacgaccac
     1741 ggccgtgagg ccggtgcggc cgccggccga cacgccc
//
LOCUS       DATAIQ010001055         1557 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_267844, whole genome shotgun sequence.
ACCESSION   DATAIQ010001055 DATAIQ010000000
VERSION     DATAIQ010001055.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1557)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1557)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1557
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_267844"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1006)
                     /locus_tag="VHN20_17360"
     CDS             complement(<1..1006)
                     /locus_tag="VHN20_17360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009494669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HEX2727595.1"
                     /translation="MPASETLDVKTKAGKPERDYSQTLFLPQTEFPMRAGLPQREPVL
                     LERWQKTDLYRRLRETSAGRPRFVLHDGPPYANGHIHIGHALNKILKDLVVRSQQMLG
                     RDSNYVPGWDCHGLPIEWKIEEEYRAKGRDKDQVPVVEFRRECRAFAEKWIDVQRTEF
                     QRLGVEGDWQNPYATMAYAAEAQIAREIMSFALTDQLYRGSKPVMWSAVERTALAEAE
                     VEYHEKTSPTIWVKFAIIDTLDRDLEGASVLIWTTTPWTIPANRAITFGSDIAYGLYR
                     VTDAPPDNWAKVGERYVIADKLAAEVLAAARVTAYEREKDVLPVMIARAAHPFRGMSG
                     G"
     gene            complement(1216..>1557)
                     /locus_tag="VHN20_17365"
     CDS             complement(1216..>1557)
                     /locus_tag="VHN20_17365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019963148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin kinase"
                     /protein_id="HEX2727596.1"
                     /translation="FPTANMSLGEDCDLRHGIYAVRVALGPGDIRDGVASFGRRPTFD
                     NGTPLLEVHVFDFEGDLYGRRLQVEFIAWIRGEERFPSAEALVGRMREDAREARASLA
                     SAPAEPISFIG"
BASE COUNT          258 a          501 c          538 g          260 t
ORIGIN      
        1 tgccgccgga catgccgcgg aacggatggg cggcgcgggc gatcatcacc ggtagtacgt
       61 ccttctcgcg ctcgtaggcg gtcacgcgcg cggcggcgag aacctccgcg gcaagcttgt
      121 cggcgatgac gtagcgctca ccgaccttgg cccagttgtc gggcggcgcg tcggtgaccc
      181 ggtagagccc gtaggcgatg tcggacccga aggtgatggc gcggttggcc gggatggtcc
      241 acggagtcgt ggtccagatc aggaccgacg cgccctccag gtcgcgatcg agggtgtcga
      301 tgatcgcaaa tttcacccag atcgtcggcg aggtcttctc gtggtattcg acttcggcct
      361 cggcgagggc cgtgcgttcg accgccgacc acatcaccgg cttggagccg cgatagagct
      421 ggtccgtcag ggcgaagctc atgatctcgc gcgcgatctg ggcctcggcc gcatacgcca
      481 tggtggcgta aggattctgc cagtcgcctt cgaccccgag gcgctggaac tccgtccttt
      541 gcacgtcgat ccatttctcg gcgaaggcgc ggcattcacg gcggaactcg accaccggca
      601 cctggtcctt gtcgcggccc ttggcccggt attcctcctc aatcttccat tcgatgggca
      661 ggccgtggca gtcccagccg ggcacgtaat tggaatcgcg gcccagcatc tgctgcgagc
      721 gcacgacgag atccttgagg atcttgttga gcgcgtgccc gatatggatg tgaccgttcg
      781 cgtaaggcgg gccatcatgc aggacgaaac ggggacggcc agcgctggtc tcgcgcagcc
      841 gccggtagag atccgtcttc tgccagcgct cgagcaacac gggctcgcgc tgcggcaggc
      901 cggcgcgcat cgggaactcc gtctgcggca ggaacagggt ctgcgagtag tcccgttccg
      961 gcttcccggc cttggttttc acgtcgaggg tttctgaagc gggcatggca tcaaaggggg
     1021 ctggctccct tcggggagca cgaatcggat tctacgggag acggcacacc cggaccttcg
     1081 cgagccgcgc tcaggcgaag gccgggccag taattcgcag aacgcggacg ggagcgtccg
     1141 gataccggga aggcgctgtc ctcatgggcg gccttgtagc agcgacctgc cagcgaataa
     1201 agccgcgccc gccggtcagc caatgaaaga gatgggctcg gccggcgccg aagcaaggct
     1261 tgcgcgcgcc tcgcgggcgt cctcgcgcat gcgcccgacc agcgcctcgg ccgaggggaa
     1321 ccgttcctcc ccgcggatcc aagcgatgaa ctcgacctgg agccggcgcc cgtaaaggtc
     1381 gccctcgaaa tcgaacacat ggacctcgag gagcggggtg ccattgtcga aggtcggccg
     1441 ccggccgaag ctggcgacgc cgtcccggat gtcaccgggg ccgagggcga cccggaccgc
     1501 atagatcccg tgcctgaggt cgcaatcctc gccgaggctc atatttgcgg tgggaaa
//
LOCUS       DATAIQ010001056         2993 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_222442, whole genome shotgun sequence.
ACCESSION   DATAIQ010001056 DATAIQ010000000
VERSION     DATAIQ010001056.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2993)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2993)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2993
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_222442"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..478
                     /locus_tag="VHN20_17370"
     CDS             <1..478
                     /locus_tag="VHN20_17370"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HEX2727597.1"
                     /translation="MTWLASPALELPDRPMSAREIAAWPIISGLQGTYLHTAAMAWFR
                     ADGVEPKRHHACSSLNVRIQLAAQGMGIALAVVSAASRELNEGSLRRVVTDRPMPTIE
                     YVIACPAFATSPALRIVAEAAKLLIAQKPDLESYYSAAERLIQWNNDNQNVSVTIM"
     gene            643..1689
                     /locus_tag="VHN20_17375"
     CDS             643..1689
                     /locus_tag="VHN20_17375"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX2727598.1"
                     /translation="MLTLHRRQVVKGMLASGLLVPAGRILAQDRTAIEDGARKEGKLA
                     LATSVTVPDFPKFLAAFTRKYPFLEVTSGLYQAATGTVLARVDAELKSGTVSFDVMHI
                     ANPAAYLAWARQGLLQPYESPELTAYPPEAYNRGFWTTVRGVGVMLAYNKNILAAEKA
                     PTGWRDLLKPEFNRKKLVIQNAASGTWLTAVYVLERALGLDYMKKLAAQSLILTSGSA
                     QQIDMLNRGEALVAAGIDHTVLFTEATQRAGIVAVYPVEGVPLSASPVAILKGAPHPN
                     AARLFVDYILSREGQQIFVSEVMKNYSLRKDMETLPGQKPLSDIKPLTPTDLADYEKF
                     VASFPDHYNELFKS"
     gene            1686..>2993
                     /locus_tag="VHN20_17380"
     CDS             1686..>2993
                     /locus_tag="VHN20_17380"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX2727599.1"
                     /translation="MTALAETARGEVRRGWSWSRVAADARSASWLPVALLLVLMVLVV
                     APVIMVGITTVRDGGGFGILTVLSSTRIIANTLYVSAGSTILAVVIGAALAFVLVRTN
                     VPGRSLLERLVIVPLYVTGLLTAIGWSWLGSPRAGFINIVARNFFGASEPIVDLQSPG
                     GVVFVAAMNAVPLPFLLIAGALRSMDPSLEESARIQGATILGAWRRVTLPLILPAVAA
                     SALLVFVHGMGLFAIPAVLGLPADFHVAGTEIYTLLTTFPPRTGRAAAWGFVLLVATA
                     LLVWLQAAILGRRSFVTVTGKAFRPRVIELGGTRHVLAGLVWAYLALAVILPVLALLW
                     AALINFLTVNLSLMRFDLGHFRYILFEYPKTYLAVGNSFILGVLSATAVCLLGLMIGW
                     VLVRSRSRLKMPLDILGMAPIAIPSLTFALGLLWLYVAMRWLPV"
BASE COUNT          475 a         1012 c          929 g          577 t
ORIGIN      
        1 gatgacctgg ctcgcgagcc ccgcgctcga attgccggat cggccgatgt ctgcgcgcga
       61 gatcgccgcg tggcccatca tctccggcct gcaaggcacg tatctgcaca cggcggccat
      121 ggcctggttt cgggcggacg gagtcgagcc gaaacgccat cacgcctgct cgagcctcaa
      181 cgtgcgcatc cagctcgccg cgcagggcat gggaatcgcg cttgccgtcg tctcggcggc
      241 gagccgggag ctcaacgaag gaagcctgcg gcgggtggtc accgaccggc cgatgccgac
      301 gatcgaatac gtcatcgcgt gtccggcatt cgccacatcg ccggccctca ggatcgttgc
      361 ggaggctgcc aagctgttga tcgcccaaaa gcccgatctg gaatcatact actccgccgc
      421 agagcggctg atccagtgga acaacgataa ccagaacgta tcggtcacga tcatgtaagt
      481 ttatcgcttt tgaattttca gcgtctgcac gttttattcc attgatctcg ctcaacgccg
      541 agcgctaggc tctctttcgc cgagtattct cctcgatctg gctggggtgc cacatgcaag
      601 ttggcgccgg tcgccgttcg aggaaagagc ggagcaggac cgatgctcac cttgcaccgt
      661 cgccaggtcg tcaaaggcat gctcgccagc gggctgctgg tccccgccgg acgcattctt
      721 gcgcaggatc gcaccgccat cgaggacggc gcgcgcaagg aggggaagct ggcgctcgcc
      781 acgtcggtga cggtgccgga ctttccaaaa ttcctggccg ctttcacgcg caagtatcca
      841 ttcctcgagg tcacgtccgg gctctaccag gcggcgaccg gcacggtgct cgcgcgcgtc
      901 gacgcggaac tgaaatccgg gactgtcagc ttcgacgtga tgcacatcgc caatccggca
      961 gcctaccttg cctgggctcg ccaagggctg ctgcagccat acgagtcgcc cgagctcacg
     1021 gcctatccgc cggaggcgta caaccgcggc ttctggacca cggtcagggg tgtcggcgtg
     1081 atgctcgcct ataacaagaa catcctggca gccgagaagg cgccgacagg ctggagggat
     1141 ctgctgaagc ccgagttcaa ccgcaagaag ctcgttatcc agaacgcggc gtcgggcact
     1201 tggctgaccg ccgtctacgt gctcgagcgc gcgctaggcc tcgattacat gaagaagctc
     1261 gcggcacaga gcctgatcct caccagcggc tcggcccagc agatcgacat gctcaaccgc
     1321 ggagaagcgc tggtcgccgc gggcatcgat cacacggtgc ttttcacgga agccacgcag
     1381 cgggccggca tcgtcgccgt gtatccggtg gaaggcgtgc ccctctctgc ctcgccggtc
     1441 gccatcctca aaggcgcgcc gcacccgaac gcggcccggc tcttcgtcga ttacattctg
     1501 tcgagggagg ggcagcagat cttcgtcagc gaggtgatga agaactactc attgcgaaag
     1561 gacatggaga cgctgcccgg tcagaagccg ttgtccgata tcaagccgct gacgccgacg
     1621 gatctcgccg attacgaaaa atttgtcgcg agcttccccg accactacaa cgagctcttc
     1681 aagtcttgac cgccctcgcc gagaccgcac gcggcgaggt ccggcgcggc tggagctgga
     1741 gccgcgtcgc cgccgatgcg agaagcgcat cgtggctgcc ggtcgccctg ctcctggtcc
     1801 tcatggtgct ggtggttgcg ccggtcataa tggtcgggat cacgaccgtg cgcgacggcg
     1861 gcggcttcgg catcctgacc gtgctgtcct ccaccaggat cattgccaac acattgtatg
     1921 tctcggcggg ctcgacgatc ctcgcggtcg tcatcggcgc ggcgctggca ttcgtgctgg
     1981 tgcgcacgaa cgtcccgggc cggagccttc tcgagcggct cgtcatcgtg ccgctctacg
     2041 tgaccggcct gctcaccgcg atcggttggt cgtggctcgg atcgccgagg gccgggttca
     2101 tcaacattgt cgcgcgcaac ttcttcggcg cgtccgagcc gatcgtcgat ctgcaatcgc
     2161 cgggcggagt cgtctttgtg gccgccatga acgccgtgcc gttgccgttc ctcctcatcg
     2221 ccggcgcgct ccgctcgatg gacccgtcac tggaggagag cgcccgcatc cagggagcga
     2281 ccatcctcgg ggcgtggcgg agagtgacgc tgccgctgat cctgccagcg gtcgccgcaa
     2341 gcgccctgct cgtcttcgtg cacgggatgg gcctgttcgc gatccccgcg gtgctcggcc
     2401 tacccgccga cttccatgtc gccggcacgg aaatctacac gctgctcacc acgtttccgc
     2461 cgcgcaccgg ccgcgcagcg gcctggggct tcgtgctcct tgtcgcaacg gcactgctcg
     2521 tgtggctgca agcggccatt ctgggccgtc gctctttcgt gacggtcacc gggaaggcct
     2581 tccgcccgcg ggtcatcgaa ctcggcggca ctcgtcatgt gctcgccggc ctggtctggg
     2641 cctatctcgc gctcgcggtc atcctgcccg tccttgccct tctatgggcg gcgctcatca
     2701 attttctgac ggtcaatctc agcctgatgc gcttcgacct cggccacttc cgctacatcc
     2761 tgttcgaata tcccaagaca tacctcgccg tgggcaacag tttcatcctg ggggtgctgt
     2821 cggcgacggc cgtgtgcctg ctcggcctga tgattggctg ggtcttggtg cgctcgcgca
     2881 gccgcctcaa aatgccgctc gatatcctcg gcatggcgcc gatcgcaatt ccctcgctca
     2941 ccttcgcgct cggacttctg tggctctacg tggccatgcg ctggctcccc gtt
//
LOCUS       DATAIQ010001057         2063 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_222784, whole genome shotgun sequence.
ACCESSION   DATAIQ010001057 DATAIQ010000000
VERSION     DATAIQ010001057.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2063)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2063)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2063
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_222784"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            250..525
                     /locus_tag="VHN20_17385"
     CDS             250..525
                     /locus_tag="VHN20_17385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015950675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727600.1"
                     /translation="MSLLPFSTCRLLLVTGLVICALAGCGRRGGLEAPPDPAAAAQPA
                     RQVQGQTVGDEEELRDEVVAVPTPTPPRQRTRGYVIPKQPFILDPLL"
     gene            731..1999
                     /gene="lysA"
                     /locus_tag="VHN20_17390"
     CDS             731..1999
                     /gene="lysA"
                     /locus_tag="VHN20_17390"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003597650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008836 - diaminopimelate decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HEX2727601.1"
                     /translation="MHHFEYRGGVLHAEDVDLRAVAADVGTPFYCYSTATLSRHYRVF
                     ADAFAGQDALVCYAMKANSNQAVLKTLADLGAGMDIVSGGELKRALAAGVPGERIVFS
                     GVGKTREEMAAALDANILCFNVESEPELAALSEVASSKGVRAPVSVRVNPNVDAKTHR
                     KIATGKSENKFGIPISRAREVYAEAARLPGLTVTGVDTHIGSQITDLAPFDNAAQLLA
                     ELARDLMADGHRLHHIDLGGGLGIPYRAGDAPPPEPRAYAEVIGRHTKDLGLKLVFEI
                     GRMIAGNAGILVTRVIYVKPGEGKTFVIADAAMNDLIRPTLYDAEHEIVPVVEAPRGA
                     GTIVADVVGPVCESGDYLALDRAIPDVRPDDLLAVMTAGAYGAVQSGTYNTRPLVPEV
                     MVNGRDYAVVRPRLSYEDVIALDRMPHWLT"
BASE COUNT          324 a          712 c          683 g          344 t
ORIGIN      
        1 gcaagggcgg cgatcagcag ggccatgcgt ctcgcgccgc gctcgcctag ctcggcaagt
       61 gcgtccgggg tgtcacgcgc gtcaaccatt cgtcattcct tcgcggccag tgggtcgttg
      121 cacggctgag acacaacaga agggcgggca caaaagcaac atctgccggc cactgcgcac
      181 cggctaatgc cgaaagtctc gcatccagcg agccttgccg ctatggtgcg gcaccttcgg
      241 agacccttga tgagtctgct gcccttttcc acctgccgcc tgttgcttgt gacagggctc
      301 gtgatctgcg ccctcgcggg gtgcgggcgg cgtggcggcc tcgaggcgcc gccggacccg
      361 gccgccgcag cccagccggc ccgccaggta cagggccaga ctgtcgggga cgaggaagag
      421 cttcgcgacg aggtcgtggc ggtgccgacg ccgaccccgc cgcgtcagcg cacgcgcggc
      481 tacgtcatcc cgaagcagcc cttcatcctc gatccgctgc tctgaagcgg cttgcagcgt
      541 gacgttccgg accatggcgc agccgctccg ttccgcgcgg cgccgggcac gcgccgtctt
      601 cgctccacgg taaggtcgac aattcgctcc gattctcctt gagttgcatg atcttttcgg
      661 cgaagtggcg tcgacccccg gatcaggtcg aaggcaggct ttcgccgggt cgtgctttaa
      721 gagttatggg atgcaccatt tcgagtaccg cggcggcgtg ctgcacgccg aggatgtcga
      781 ccttcgcgcc gtcgcggcgg acgtcggcac gcccttctat tgttactcga ccgccaccct
      841 gagccggcac taccgggtct tcgccgacgc cttcgccggc caggacgccc tggtctgtta
      901 cgccatgaag gccaattcca accaggcggt gctcaaaacc ctggccgacc tcggggccgg
      961 catggacatc gtgtcgggag gcgagctcaa gcgcgccctc gctgccgggg tacccggtga
     1021 gcgcatcgta ttttcggggg tcggcaagac ccgcgaggaa atggcggcag ccctcgacgc
     1081 caacatcctg tgcttcaacg tcgaaagcga gcccgaactg gcggcgctgt cggaggtcgc
     1141 ctcgtcgaaa ggcgtgcgtg ccccggtctc ggtccgcgtc aatcccaatg tcgatgcgaa
     1201 gacgcatcgc aagatcgcga ccgggaaatc cgagaacaag ttcggcattc ccatctcgcg
     1261 ggcgcgcgag gtttatgccg aggcggcgcg gctgcctggc ctgaccgtca ccggcgtcga
     1321 cacccatatc ggcagccaga tcacggacct ggcgccgttc gacaacgccg cgcagctcct
     1381 cgccgagctc gcccgcgacc tgatggcgga cgggcatcgc ctacaccaca tcgatcttgg
     1441 cggcggcctc ggcattccat accgcgccgg tgacgcgccg ccgccggagc cgcgcgccta
     1501 tgcggaggtg atcgggcggc acacgaagga tctcggcctc aagctggtct tcgagatcgg
     1561 gcgcatgatc gctggcaatg ccgggatcct ggtgacgcgc gtgatctacg tgaagcccgg
     1621 cgagggcaag accttcgtca tcgccgacgc cgccatgaac gacctgatcc ggccgacgct
     1681 ctacgatgcg gagcacgaga tcgtcccggt cgtcgaggcg ccgaggggcg ctggaaccat
     1741 cgtcgccgac gtggtcgggc cggtctgcga gagtggcgac tacctggcgc tcgatcgtgc
     1801 catccccgat gtgcgcccgg acgacctcct ggcggtcatg accgcggggg cctacggcgc
     1861 cgtgcagtcg ggcacctaca acacgcgccc cctggtgccc gaggtcatgg tcaacgggcg
     1921 cgactacgcc gtggtccggc cgcggctgtc ttacgaagat gtgatagccc tcgaccgtat
     1981 gccgcattgg ctgacctgag ccgcggcctc atttgacggc tgccagcggt gcgccagccg
     2041 tgttaccctt cgcgaagcag cgc
//
LOCUS       DATAIQ010001058         4391 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_222861, whole genome shotgun sequence.
ACCESSION   DATAIQ010001058 DATAIQ010000000
VERSION     DATAIQ010001058.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4391)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4391)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4391
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_222861"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1594
                     /locus_tag="VHN20_17395"
     CDS             <1..1594
                     /locus_tag="VHN20_17395"
                     /inference="COORDINATES: protein motif:HMM:NF016348.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="LPS-assembly protein LptD"
                     /protein_id="HEX2727602.1"
                     /translation="TGWDVAMMTDKWFLNNYKIRSESVGINYQGFTESTSTVYLQGQG
                     DRSFIDARGYYFKTLSTYDWQKQQAVVHPVIDYNKRVDGPGWLGGEVAVDANITSVSR
                     EAAQFQATSRLFKADLFPGTPYAGLFETCSVYDRGRCIVRGLSGNFSRASAQVSWRRN
                     YIDPFGQVWTPFTYARVDGFWNDPDPTGYPNFAIANFIETEQQFVGRAMPAVGLEYRY
                     PLIARLGTWGSQQIEPIAQIVARPNESRIGKLPNEDAQSLVFDDSSLFDWDKFSGYDR
                     AEGGVRANTALKYSVSGANGFYGEAMFGQSYQLAGRNSFATRDLVNTGIESGLDSGAS
                     DYVGRVQVAANSNFAVMSRARFDQDDFSVRRFEAGINGSFAPILPLSASVIYARYEAQ
                     PELGFERRREGLVASTTYNVTPNWFLSGSVLFDLDKYLTAKEEFTANMAKYMAGELTQ
                     LPVYHKDKVWEVSGTTLGVGYVDECTTLSVQYSMVPRPIANGTIESDRTVLVKLELRT
                     LGAINVKQAVGEPTTQDGVATR"
     gene            1591..2631
                     /gene="pdxA"
                     /locus_tag="VHN20_17400"
     CDS             1591..2631
                     /gene="pdxA"
                     /locus_tag="VHN20_17400"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018267515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050570 - 4-hydroxythreonine-4-phosphate
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0042823 - pyridoxal phosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase
                     PdxA"
                     /protein_id="HEX2727603.1"
                     /translation="MTAVSLARLPLALTQGEPAGIGPEIALKAWLRRNEAGISPFVVL
                     GDPAFLAATARRLDLPVPVESASPEEAPRVFRSALPVAPLSATVSVAPGQPDAATAGV
                     TLEAIETAVKLARQRRIGGIVTNPIAKHVLYAAGFQHPGHTEYLAALSVEGDAPPPHP
                     VMMLWSEELAVVPVTIHIPLRAAPEALTTDLIVTTGRIVARDLRERFGLARPRLAVAG
                     LNPHAGESATLGTEDRDVIAPAVARLQAEGIAVTGPLPADTMFHREARRTYDAALAMY
                     HDQALVPIKTIAFDDAVNVTLGLPFVRTSPDHGTAFDIAGRGIARPDSLIAALRLAAR
                     LAEKKPGHAQVR"
     gene            2680..3582
                     /gene="rsmA"
                     /locus_tag="VHN20_17405"
     CDS             2680..3582
                     /gene="rsmA"
                     /locus_tag="VHN20_17405"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012317559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000179 - rRNA
                     (adenine-N6,N6-)-dimethyltransferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HEX2727604.1"
                     /translation="MSRIDDLPPLREVVQRHGLLAKKSLGQNFLFDLNLTSRIARAGG
                     PLEGVTVVEVGPGPGGLTRALLAAGAAKVVAIERDARCLPALAEIAAHYPGRLEIVEA
                     DALAVDPRALVGHAPTRIVANLPYNVGTALLTGWLTAEQWPPWWQSLTLMFQREVAER
                     IVADERDRKNYGRLGVLCGWRTEARILFDVPPSAFVPPPKITSSVVQLVPRARPLPCR
                     VAALEAVTRAAFGQRRKMLRQSLKSITPAPVELTAAAGLPETARAEDVPVAGFVALAN
                     AFDASANSGSGRASVVGPDDRGSV"
     gene            complement(3574..4185)
                     /locus_tag="VHN20_17410"
     CDS             complement(3574..4185)
                     /locus_tag="VHN20_17410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727605.1"
                     /translation="MKAAGLAVALCLSSIPAYAAGIDCSTWQTTYSGLELFGITLGSD
                     IKTVSQRLVREHGGAQPRWLDGVSVNIDRIAGPSLHGMPIETILCDDGREMIVGMTTG
                     GSLSEAGMFLGARIETVEEWTAAHEGDLRKSVRGTIHRAEDDRHVYVWGVKARLEVAN
                     EHGLRDYFILRRGCLKKLAPDSFATCPFSWWQAYQTRTKRVLD"
BASE COUNT          710 a         1569 c         1421 g          691 t
ORIGIN      
        1 gacgggctgg gacgtcgcca tgatgaccga caagtggttc ttgaataact acaagatccg
       61 cagcgaaagc gtcggcatca actaccaggg cttcacggaa tcgacctcga ccgtctatct
      121 gcagggccag ggcgaccggt cgttcatcga cgcccgcggc tactacttca agaccctgtc
      181 gacctacgac tggcagaagc agcaggcggt ggtccacccg gtcatcgact acaacaagcg
      241 cgtcgacggg ccgggctggc tcggcggcga ggtcgcggtc gacgccaata tcaccagcgt
      301 gagccgggaa gctgcccagt tccaggcgac ctcgcgcctg ttcaaggccg atctgttccc
      361 gggaacgccc tatgccggcc tgtttgagac gtgctccgtc tacgaccgcg gccgctgcat
      421 cgtgcgcggc ctgagcggca acttctcgcg cgcctcggcg caggtgtcgt ggcggcgcaa
      481 ctatatcgac ccgttcgggc aggtctggac gccgttcacc tacgcgcgcg tcgacggctt
      541 ctggaacgat cccgacccga ccggctaccc gaatttcgca atcgccaact tcatcgagac
      601 cgagcagcaa ttcgtcggcc gcgccatgcc ggccgtcggc ctggaatacc gctacccgct
      661 gatcgcccgg ctcgggacct ggggcagcca gcagatcgag ccgatcgccc agatcgtcgc
      721 gcgcccgaac gagagccgca tcggcaagct gcccaacgag gacgctcaga gcctcgtgtt
      781 cgacgactcg tccctgttcg attgggacaa gttctcgggc tacgaccgcg ccgaaggcgg
      841 cgtcagggcg aacacggccc tcaaatacag cgtcagcggc gccaacggct tctacggcga
      901 ggccatgttc ggccagtcct accagcttgc cggccgcaac tccttcgcga cgcgcgacct
      961 cgtcaatacc ggcatcgaga gcggtctcga ttcgggagcc tcggactatg tcggccgcgt
     1021 ccaggttgcc gccaacagca atttcgcggt gatgagccgg gcccgcttcg accaggatga
     1081 tttctcggtc cgccgctttg aggccggcat caacggcagc ttcgctccga tcctgccgct
     1141 ctccgcctcg gtgatctatg cccgctacga ggcgcagccg gagctgggct tcgagcgccg
     1201 ccgcgaaggt ctcgtcgcct cgaccaccta caacgtgacg ccgaactggt tcctgagcgg
     1261 ctcggtcctc ttcgatctgg acaagtacct gaccgccaaa gaggaattca ccgcgaacat
     1321 ggccaaatac atggccggcg agctgactca gctgccggtc taccacaagg acaaggtgtg
     1381 ggaggtctcc ggcaccacgc tcggcgtcgg ctacgtcgac gagtgcacca ccctcagcgt
     1441 gcagtacagc atggtgccgc gcccgatcgc caacggcacg atcgagtctg acaggaccgt
     1501 cctcgtcaag ctcgagctgc gcacactcgg cgccatcaac gtgaagcagg ccgtcggcga
     1561 gccgaccacc caagacggtg tcgcgacgcg gtgaccgcgg tcagcttggc gcggctgccg
     1621 ctggcgctca cgcaaggtga gccggcaggg ataggccccg agatcgcgct caaagcctgg
     1681 ctccggcgca acgaggctgg catctcgccg ttcgtggtac tcggtgatcc ggcctttctc
     1741 gccgccaccg cccgccgcct ggacctgccg gtgcccgtcg agagcgcctc gcccgaggag
     1801 gcgccgcggg tgtttcgttc ggcgctgccg gtcgcgccgt tgtccgcgac ggtgtcggtc
     1861 gcgcccggtc agccggacgc cgcgaccgcc ggcgtgacgc tcgaagcaat cgagaccgcc
     1921 gtgaagctgg ccaggcagcg ccgcatcggc gggatcgtga ccaatccgat cgcgaagcac
     1981 gttctttatg cggccggctt ccagcatccg ggccacacgg aatacctcgc ggcgctctcg
     2041 gtcgaaggcg acgcgccgcc gccgcatccg gtgatgatgt tgtggagcga agagctggcg
     2101 gtcgttccgg tcaccatcca tatcccgctg cgggcggcgc cggaggccct gaccaccgat
     2161 ctgatcgtca ccacgggccg catcgtcgcc agggacctgc gcgagcgttt cgggctggca
     2221 cggcctcgcc tggcggtcgc cggcctcaac ccgcacgccg gcgagagtgc cacgctcggc
     2281 acggaggatc gcgacgtgat cgcgccggcc gttgcccggc tgcaggccga aggcatcgcc
     2341 gtgaccggcc cgctgcccgc cgacacgatg ttccaccgcg aggcgcggcg gacctacgac
     2401 gcggccctcg ccatgtatca cgatcaggcg ctcgtcccga tcaagaccat tgccttcgac
     2461 gatgccgtca acgtgacgct cggcctgccg ttcgtgcgca cgtcgcccga ccacggcacc
     2521 gcgttcgaca tcgccggccg cggcatcgcc cgccccgaca gcctgatcgc cgcgctgcgg
     2581 ctcgcggcgc ggctcgcgga aaaaaaaccc gggcatgccc aggttcgctg acaacgccgg
     2641 gccgcaacag gcggcttgcg tgacgccggc cgccaccgca tgagccgcat cgacgatctg
     2701 ccgcccctgc gggaggtcgt gcagcggcat gggctcctgg cgaagaagtc gctcggccag
     2761 aatttcctgt tcgatctgaa cctgaccagc cgcatcgcgc gggccggcgg gccgctcgag
     2821 ggcgtgacgg tcgtcgaggt cggcccaggg ccgggcggcc tgacgcgcgc gctgctcgcc
     2881 gccggggccg ccaaggtggt cgccatcgag cgcgacgcgc gctgcctgcc ggcgctcgcc
     2941 gaaatcgccg cgcactatcc cggacggctc gagatcgtcg aagccgacgc cctcgccgtc
     3001 gatccgcggg cgctcgtcgg ccacgcgccg acgcgcatcg tcgccaacct tccttacaat
     3061 gtcggcacgg ccctcctcac cggctggctg acagccgagc aatggccgcc gtggtggcag
     3121 tcgctgacat tgatgttcca gcgcgaggtg gccgagcgca tcgtcgccga cgagcgcgac
     3181 cgcaagaact acggccgcct cggcgtgctc tgcggctggc ggacggaggc gcgcatcctg
     3241 ttcgacgtgc cgccgtcggc gttcgtgccg ccgccgaaga tcacgtccag cgtcgtgcag
     3301 ctcgtaccgc gggcgcgtcc cctcccctgc cgggtcgcgg ccctcgaagc cgtcaccagg
     3361 gcggccttcg ggcagcgccg caagatgctg cggcaaagcc tcaagtcgat cacacccgcg
     3421 cccgtcgagc tcacggcggc ggcgggcttg ccggaaaccg cgcgtgccga ggacgtcccg
     3481 gtcgcaggtt tcgtggcgct cgccaacgct tttgatgcca gtgccaactc ggggtcaggc
     3541 agggcgagcg tcgtcggtcc tgacgatcgc ggatcagtct aggactcgct tggtcctggt
     3601 ttgataggcc tgccaccatg agaacggaca ggtggcgaac gagtcgggcg caagcttttt
     3661 caggcaccct cgccgaagga tgaagtaatc gcgcaggcca tgctcgttcg ccacctcgag
     3721 acgcgccttc acgccccaga catagacatg gcggtcgtct tctgcccggt ggatggtccc
     3781 gcggacactc tttctaaggt cgccctcgtg cgccgcggtc cactcctcga cggtctcgat
     3841 gcgcgcgccc aggaacatgc cggcttccga cagcgaacca cccgtcgtca tgccgacgat
     3901 catctcgcga ccatcgtcac acaagatcgt ttcgatcggc atgccgtgga gcgatggtcc
     3961 ggcgatcctg tcgatgttga cgctcacacc gtcgagccag cggggctggg cgcccccgtg
     4021 ctccctgacc aggcgctgac tgaccgtctt gatgtccgaa ccgagcgtga tgccgaagag
     4081 ctcgagcccc gaataggtgg tctgccacgt gctgcaatcg atgccggccg cataggcagg
     4141 gatcgatgac agacagagcg cgacggcgag accagcggcc ttcatgctgg ccgactgttc
     4201 gtcgtctcca acgcgtcgtc aagcagcgcc gagccgagcg tccacgggag cgggactcaa
     4261 ttcaggctga atcgatcccg ctctcgtagc cactgcgccg tcacgccggc gccgccaaaa
     4321 ggccgtcgat gaagctgtcg agcccgacct ggcgctcacg ccgcagccgc tcggccttca
     4381 agatcgcctt g
//
LOCUS       DATAIQ010001059         2856 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_222967, whole genome shotgun sequence.
ACCESSION   DATAIQ010001059 DATAIQ010000000
VERSION     DATAIQ010001059.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2856)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2856)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2856
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_222967"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..666
                     /locus_tag="VHN20_17415"
     CDS             <1..666
                     /locus_tag="VHN20_17415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX2727606.1"
                     /translation="IEQFWDSARGLRLLGLGYAVPYLTTVRDGAERTLAFMPASQGVV
                     NWPATGHSASALVDPLTMPLPDASIDRVLLVHALEMVESPSELLQEIWRILTPGGRVI
                     VVAPNRRGLWARMDTTPFGHGQPYSRSQLKALMRQTMFSPEGWAETLYVPPLHSWLML
                     RTAVAWERFGIALSLPFAGLHVVEATKQLYRPVPVRAKRRAARLAPVLVPAPAPAPRA
                     ALD"
     gene            777..1742
                     /locus_tag="VHN20_17420"
     CDS             777..1742
                     /locus_tag="VHN20_17420"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012334513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit alpha"
                     /protein_id="HEX2727607.1"
                     /translation="MRSYLDFEKPVAELEAKLEELRELGQSEDAVAISDDIARLEAKA
                     AAALKELYAGLLPWQKTLVARHPERPHFVDYCTSLIDDFTPLAGDRTFGEDEAILGGF
                     GRFRGEPVCVIGQEKGSTTETRIRHNFGMARPEGYRKATRLMELADRFELPVLSFVDT
                     AGAYPGIEAEERGQAEAIARSTDACLALGAPNVAIVIGEGGSGGAIAVATANKVLMLE
                     HAIYSVISPEGAASILWRDPTRAQDAATNMKITAQDLLRLGVIDAIVPEPTGGAHRDP
                     QGAIALAGNAIADALRDLGNMGPDEIREHRAEKFLAIGRKLDGAR"
     gene            1868..>2856
                     /locus_tag="VHN20_17425"
     CDS             1868..>2856
                     /locus_tag="VHN20_17425"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="murein L,D-transpeptidase family protein"
                     /protein_id="HEX2727608.1"
                     /translation="MRMRFVLLAGVVLALAGCNDQYSSSGRHLSPIPPATLALMGQKG
                     MSQSDPILVRAYKKESELELWKKGRDGKYALLKTFPICRWSGQLGPKVREGDRQAPEG
                     FYTVTPALMNPNSSFYLSFDTGYPNAYDRAHGRTGSHLMVHGSCSSRGCFAMTDEAIA
                     EIYAVARDAFAGGQRGFQFQSYPFRMTAENLAKHRADPNMAFWKNLKEGSDYFETMQE
                     EPPVSVANMRYSFGAEPAAVAQKRIADEHKVADLVGQGIPAVRTVYDDGGGHASFRQA
                     MGVADDRGASGALAFMSSGPSRRLGDVSRPDALAAGPREVLVEQPVKGKSASA"
BASE COUNT          454 a         1023 c          920 g          459 t
ORIGIN      
        1 atcgaacaat tctgggattc cgcacgcggc ctgcgccttc tgggcctcgg ctatgccgtt
       61 ccctacctca ccaccgtgcg cgacggcgcc gagcgcaccc tcgctttcat gcccgcgtcg
      121 cagggggtcg tgaactggcc agcgaccggc cactcggcct ccgctctcgt cgatcctctg
      181 acgatgccct tgccggacgc gtcgatcgac cgcgtgctgc tggtgcacgc gctggagatg
      241 gtcgaaagcc cgagcgaact ccttcaggag atctggcgga ttctgacgcc gggcggccgt
      301 gtcatcgtgg tggcgccgaa ccgtcgcggc ttatgggcgc gcatggacac cactcccttc
      361 ggacacggcc agccctacag ccgctcgcag ctcaaggcgc ttatgcggca gaccatgttc
      421 tcgcccgagg gctgggccga gacgctctac gtccctcccc tgcacagctg gcttatgctg
      481 cgcaccgccg tggcatggga gcgcttcggc atcgccctgt cgctgccgtt tgccgggcta
      541 catgtggtcg aggcgacgaa gcagctctac cgcccggtcc cggtccgcgc gaaacgccgc
      601 gcggcgaggc tcgccccggt cctcgtcccc gcacccgccc cggctccccg ggctgccctg
      661 gactgagggc cgcgccttga ctcgccgcct ccccttcgcc agtgtccgcc gcgtccggcg
      721 gccagacggg tccgccccga tcatctccct tcagtcgcat tgttcagccc cgcgtcatgc
      781 gcagctatct cgattttgaa aagccggttg cggagctcga agccaagctc gaggagctgc
      841 gcgagcttgg ccagagcgag gatgcggtcg cgatttcgga cgacatcgcc cggctcgaag
      901 cgaaggccgc ggcggcgctg aaggaactct atgcgggcct gcttccctgg cagaagacgc
      961 tggtcgcccg tcatcccgag cggccgcatt tcgtcgacta ctgcaccagc ctgatcgacg
     1021 acttcacgcc gctggcgggc gaccgcacgt tcggcgagga cgaggccatc ctcggcggct
     1081 tcggccgctt tcgcggcgag ccggtctgcg tgatcggcca ggaaaaaggc tcgaccaccg
     1141 agacgcgcat ccgccacaac ttcggcatgg cgcgacccga gggttatcgc aaggcgaccc
     1201 gcctcatgga gctcgccgat cggttcgagc ttccggtctt gagcttcgtc gacacggccg
     1261 gcgcctatcc cgggatcgag gcggaagagc gcggccaggc cgaggccatc gcccgctcca
     1321 ccgatgcctg cctcgccctc ggtgcgccca acgttgccat cgtcatcggc gagggcggct
     1381 ccggcggcgc catcgcggtc gcgaccgcca acaaggtcct gatgctggag cacgcgatct
     1441 acagcgtgat ctcgccggag ggtgccgcgt cgatcctgtg gcgtgacccg acccgcgcgc
     1501 aggatgcagc caccaacatg aagatcaccg cccaggacct gctgcggctc ggcgtcatcg
     1561 acgcgatcgt gcccgagccg accggcggcg cgcatcgcga tccgcaaggc gccatcgccc
     1621 tggcgggcaa cgccatcgcc gacgcgctgc gcgacctcgg caacatgggc cccgacgaga
     1681 tccgcgagca ccgcgccgaa aaattcctcg ccatcgggcg caagctcgac ggcgcgcgtt
     1741 agcgattgct taacctccgt gcctcagcga agcttgccgt aagcggccgg taaggctaac
     1801 cattggggaa gagctttgcc gtaagactgg cgcaagccgg cgacgcaaag ccgatttggg
     1861 ggtccgcatg agaatgcgtt tcgtgctgct ggccggcgtc gtgctcgcgc tcgcgggctg
     1921 caacgaccag tacagcagct ccggtcgcca tctctccccc attccgccgg cgaccctggc
     1981 gctgatgggg caaaagggca tgtcgcagag cgatccgatc ctcgtgcgtg cctataagaa
     2041 ggaatccgag ctcgagcttt ggaagaaggg ccgtgacggc aaatacgccc tgctcaagac
     2101 gttcccgatc tgccgctggt ccggccagct cgggccgaag gtgcgcgaag gcgaccggca
     2161 ggcgcctgaa gggttttaca cggtcacgcc ggccctgatg aacccgaatt cgagcttcta
     2221 cctgtcgttc gacaccggct atcccaatgc ctacgaccgc gcccacggcc gcaccggctc
     2281 gcacctgatg gtgcacggca gctgctcgtc gcgcggttgc ttcgccatga ccgacgaagc
     2341 cattgccgag atctacgccg tcgcccgcga cgccttcgcg ggtggccagc gcggcttcca
     2401 gttccagtcc tatcccttcc gcatgaccgc cgagaacctg gcgaagcatc gcgccgatcc
     2461 gaacatggcg ttctggaaga acctcaagga aggttcggat tatttcgaga ccatgcagga
     2521 agaaccgccg gtctcggtcg ccaacatgcg ctattcgttt ggcgccgagc ctgcggcggt
     2581 cgcgcaaaag cgcatcgcgg acgagcacaa ggtcgccgat ctggtcggcc agggcatccc
     2641 ggccgtgcgc accgtctacg acgacggcgg cgggcacgcc tccttccgcc aggccatggg
     2701 cgtcgcagat gaccgcggcg ccagcggcgc gctcgcattc atgagcagcg gcccctcgcg
     2761 ccggctcggc gacgtgagcc ggcccgatgc gctggcggcg ggcccgcgcg aggtcctcgt
     2821 cgagcagccg gtaaagggaa aatccgcctc tgcgca
//
LOCUS       DATAIQ010001060         6526 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_360827, whole genome shotgun sequence.
ACCESSION   DATAIQ010001060 DATAIQ010000000
VERSION     DATAIQ010001060.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 6526)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6526)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6526
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_360827"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..846)
                     /gene="gatB"
                     /locus_tag="VHN20_17430"
     CDS             complement(<1..846)
                     /gene="gatB"
                     /locus_tag="VHN20_17430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016884 - carbon-nitrogen ligase activity,
                     with glutamine as amido-N-donor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatB"
                     /protein_id="HEX2727609.1"
                     /translation="MNVPVDPKKLIKGALHDWEVIVGMEIHAQVTSEAKLFSGASTAF
                     GGEPNDHVSFVDAAMPGMLPVINEECVRQAIRTGLGLKAQINLRSVFDRKNYFYPDLP
                     QGYQISQYKSPVVGEGEVLVDVTPEETITVRIERLHLEQDAGKSIHDLHPTASFVDLN
                     RSGVALMEIVSKPDMRSADQAKAYVGKLRTILRYLGTCDGDMEKGNLRADVNVSVRRL
                     GEPLGTRCEIKNVNSIRFIGQAIEYEARRQIGILEDGGSIDQETRLFDPGKGETRSMR
                     SKEEAH"
     gene            1001..1279
                     /locus_tag="VHN20_17435"
     CDS             1001..1279
                     /locus_tag="VHN20_17435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006019142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SemiSWEET transporter"
                     /protein_id="HEX2727610.1"
                     /translation="MLNVETVVGFVAAVCTTLSYIPQVKKAWQTGSTGDLSLKMLTIL
                     ASGIALWIVYGFLKGDVVIILANSVSLLLLASLVVFKLRENGPARAHA"
     gene            1463..1747
                     /locus_tag="VHN20_17440"
     CDS             1463..1747
                     /locus_tag="VHN20_17440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727611.1"
                     /translation="MDRDTTTYDRETRVYDRDTGGSNFLAFLIGGLVIAIGLLAFLFY
                     DGGSTNRDVSTTSSTMPRIESPTSPIPPASRPSTAPSAPSSAPSAPSNPQ"
     gene            complement(1819..3300)
                     /gene="gatA"
                     /locus_tag="VHN20_17445"
     CDS             complement(1819..3300)
                     /gene="gatA"
                     /locus_tag="VHN20_17445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015823501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030956 - glutamyl-tRNA(Gln)
                     amidotransferase complex [Evidence IEA];
                     GO_function: GO:0050567 - glutaminyl-tRNA synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatA"
                     /protein_id="HEX2727612.1"
                     /translation="MTDLTDLSLAEARDGLRAKEFSAVELAKAHVAAVEKARALNAYI
                     LETPDRALAAAAASDDNLRRGEGRPLEGIPLGIKDLFCTEGVRTTACSHILDGFVPHY
                     ESTVTSQLWRDGAVMLGKLNNDEFAMGSSNETSYYGPVVSPWRRPGSNAHLVPGGSSG
                     GSAAAVAARLCLGATATDTGGSIRQPAAFTGTVGIKPTYGRCSRWGIVAFASSLDQAG
                     PIGKTVRDTAILLRSMAGHDPKDTTSADLPVPDFEAAVRRGVKGLRIGIPKEYRIDGM
                     PAAIEKLWADGARWLKDAGAEIVDVSLPHTKYALPAYYIVAPAEASSNLARYDGVRYG
                     LRVPGRDVTGMYENTRAEGFGREVKRRVMIGTYVLSAGYYDAYYVRAQKIRTLIKRDF
                     EEAYARGVDAILTPATPSAAFAVGEKGSDDPVEMYLNDVFTVTVNMAGLPGIAVPAGL
                     DEQGLPLGLQLIGRAFDEETLFAVAQVIEDAAGRIDLPQPWWA"
     gene            complement(3555..3842)
                     /gene="gatC"
                     /locus_tag="VHN20_17450"
     CDS             complement(3555..3842)
                     /gene="gatC"
                     /locus_tag="VHN20_17450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011472713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030956 - glutamyl-tRNA(Gln)
                     amidotransferase complex [Evidence IEA];
                     GO_function: GO:0050567 - glutaminyl-tRNA synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatC"
                     /protein_id="HEX2727613.1"
                     /translation="MSVDQVTVRRIARLARLAITDEDVPHLQGELNAILAFVEQLNEV
                     DVGGVEAMTSVTPMLMKKRADGVTDGGYPDKIVANAPATEDNFFVVPKVVE"
     gene            complement(4004..4432)
                     /locus_tag="VHN20_17455"
     CDS             complement(4004..4432)
                     /locus_tag="VHN20_17455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727614.1"
                     /translation="MVVDDKELGDRGWQTVDLSTPLSVSSVLADARGLRRGKWSSSTS
                     LSLRWRSMVERGASACRRKMQASARRVPEGDIVYVGRGQGPFAATDGDGAPGGESLRQ
                     LLLLLALGAVMAGSFYLGQTWTKESVIVVPAPSSFRSVIT"
     gene            complement(4617..5315)
                     /locus_tag="VHN20_17460"
     CDS             complement(4617..5315)
                     /locus_tag="VHN20_17460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HEX2727615.1"
                     /translation="MKITWFGHSTFRLDFADKVVLIDPFFTGNPAFQGNRDELVEGAT
                     HILITHGHSDHVGDALEIAGRTGAKVVSNFEICMWLASKGLEAFDPMNTGGTTDQNGF
                     TVTLVRADHSASITEDGVAIPLGNPNGIVLKAPGEPTVYHMGDTDIFGDMALIAELHR
                     PDVVIVPVGDRFTMGGETAALAVTRYFKPRAAIPCHYGSFPIIDATADRFVAAMEGSG
                     IQVVVPHRNMSIRI"
     gene            5492..6001
                     /gene="ruvX"
                     /locus_tag="VHN20_17465"
     CDS             5492..6001
                     /gene="ruvX"
                     /locus_tag="VHN20_17465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020091786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HEX2727616.1"
                     /translation="MQPQNQDQDLQALARDLAKGARLIGVDLGEKTIGLALSDVERSI
                     ATPLETLKRTKFTPDAERLRAIVSRFVVGGLVIGLPLNMDGSEGPRAQATRSFARNLG
                     PLLGIPIAFWDERLSTAAVTRTLLAADASRARRGAVVDKMAAAYILQGALDRLRSIES
                     SAHADPDQP"
     gene            complement(6048..>6526)
                     /locus_tag="VHN20_17470"
     CDS             complement(6048..>6526)
                     /locus_tag="VHN20_17470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015684422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727617.1"
                     /translation="TEVRWRGGWGGHRWGGYGGWGYRRHGWGGGGAFAAGAAIGLIGA
                     AAASSYGYGYGYGYGYPYYSYYPAYYGYSYPYYSYSYYPSYSYYPYSYGYAPAYYRPY
                     WGYRRAYYRPYYGGYRHAYWGGGYRHAYRGGGYRRAYWAPGRVAVRRAVVHHRRWH"
BASE COUNT         1077 a         2201 c         2142 g         1106 t
ORIGIN      
        1 gtgcgcctcc tcctttgagc gcatcgagcg cgtctcgccc ttgcccgggt cgaacaggcg
       61 cgtctcctgg tcgatgctgc cgccgtcctc gaggatgccg atctggcggc gcgcctcgta
      121 ttcgatggct tggccgatga agcggatcga gttgacgttc ttgatctcgc agcgcgtgcc
      181 gagaggttcg ccgaggcggc gcaccgacac gttcacgtcg gcgcgcaggt tgcccttttc
      241 catgtcgccg tcgcaggtgc cgagatagcg cagtatggtg cgcagcttgc cgacataggc
      301 cttggcctgg tcggccgagc gcatgtcggg cttcgacacg atctccatga gggcgacgcc
      361 cgagcggttg aggtcgacga agctcgcggt cggatgcagg tcgtggatcg acttgccggc
      421 gtcctgctcc agatgcagcc gttcgatgcg caccgtgatg gtctcctcgg gcgtcacgtc
      481 gacgagaacc tcgccttcgc cgacgaccgg gctcttgtac tggctgatct ggtagccctg
      541 cggcaggtcg ggatagaaat agttcttccg gtcgaacacg gatctgaggt tgatctgcgc
      601 cttgaggcca aggccggtgc ggatcgcctg gcgcacgcat tcctcgttga tgaccggcag
      661 catgccgggc atggcggcat cgacgaacga gacgtgatcg ttgggctcgc cgccgaatgc
      721 ggtcgaggcg ccggagaaca gcttcgcctc gctcgtcacc tgggcatgga tctccatgcc
      781 gacgatcacc tcccagtcat gcagcgcgcc cttgatcagc ttcttcggat cgacgggaac
      841 gttcatgcga caaaaccttc ttggcgaagc ggcggcgcag gtgccggacc gcgcccgcga
      901 tacgggcgcg ggcggtgccg gtcaaggagg acgagagccg cacgccggca gtggactgcc
      961 acccgaggga acatgccccc gctcccggca ttgtgccctg atgctgaatg ttgaaaccgt
     1021 ggtcggcttc gtggccgccg tgtgcaccac cctgtcctac atcccccagg tcaagaaggc
     1081 ctggcagacc ggctcgaccg gcgacctgtc gctcaagatg ctcacgatcc tggcaagcgg
     1141 aatcgccctc tggatcgtct acggcttcct caagggcgac gtcgtgatca tcctcgccaa
     1201 cagcgtgagc ctgctgctgc tggcgagtct cgtcgtgttc aagctgcgcg aaaatggacc
     1261 cgcccgcgct cacgcctgag ttttcgctag tcacgcttgg taattgtcaa gcttgtgagg
     1321 gctctgacgg tgaaactccc ccgcctctta ggcgttatcc gatcagttcg aaagtatagg
     1381 agagcagacg atggcgatta atcatgaccc cgatctcgtg ggtcgcgact caacgtccac
     1441 gcacccccct ggttcttcca tgatggaccg cgatacgacc acctatgatc gtgaaacccg
     1501 ggtttacgac cgcgataccg gcggctcgaa cttcctggcg ttcctgatcg gcgggctcgt
     1561 catcgcgatc ggtcttctgg cgttcctgtt ctatgacggc ggcagcacga accgcgacgt
     1621 cagcacgacc agcagcacga tgccgcgcat cgaaagtccg acatcgccga tcccgccggc
     1681 gtcccgtcct tcgaccgcgc cgtcggcacc gtcgagcgcc ccgagcgcgc cgtcaaaccc
     1741 gcagtaacgg gcggcgtcat ctgaacaacg aaggccggac ctcgcgtccg gcctttctgt
     1801 ttggaaggac gaacggcgtc acgcccacca cggttgcggc agatcgatgc gcccggcggc
     1861 gtcctcgatc acctgggcga cggcgaacag cgtctcctcg tcgaaggcac gcccgatcag
     1921 ctgcaggccg agcggcaggc cctgctcgtc gagcccggcg ggcacggcga tgcccggcag
     1981 cccggccatg ttcaccgtca ccgtgaagac gtcgttgaga tacatctcga ccgggtcgtc
     2041 cgagcccttc tcgccgaccg cgaacgccgc cgacggcgtc gccggcgtga ggatcgcgtc
     2101 gacgccgcgc gcataggctt cctcgaagtc gcgcttgatc agcgtgcgga ttttctgggc
     2161 gcgcacgtaa taggcgtcgt aatagccggc ggacagcaca taggtgccga tcatcacgcg
     2221 ccgcttgacc tcccgcccga aaccttcggc gcgggtgttt tcgtacatgc cggtcacgtc
     2281 ccggcccggc acgcgcaggc cgtagcgcac gccgtcgtaa cgggcgaggt tcgacgaggc
     2341 ttccgcaggc gcgacgatgt aataggccgg cagcgcgtat ttggtatgcg gcagcgacac
     2401 gtcgacgatc tcggcaccgg catccttgag ccatcgggcg ccgtcggccc acagcttttc
     2461 gattgccgcc ggcatgccgt cgatgcggta ttccttggga atgccgatcc tgagaccctt
     2521 gacccctcgc ctcaccgcgg cctcgaaatc cggcaccggc aggtcggccg aggtcgtgtc
     2581 cttgggatcg tggccggcca tcgagcgcag caggatggcg gtgtcgcgca ccgtcttgcc
     2641 gatcggcccc gcctgatcga gcgacgacgc gaaggcgacg atgccccagc gcgagcagcg
     2701 cccgtaagtc ggcttgatgc cgaccgtgcc ggtgaacgcc gccggctggc ggatcgagcc
     2761 gcccgtatcg gtggcggtgg cgccgagaca aagccgcgcc gcgaccgccg ccgccgagcc
     2821 gccggacgag ccgcccggca ccaggtgggc attcgacccc gggcgccgcc agggcgacac
     2881 cacgggcccg taataggagg tctcgttgga cgagcccatc gcgaactcgt cgttgttgag
     2941 cttgcccagc atcacggcgc cgtcgcgcca gagctggctc gtcaccgtcg actcgtaatg
     3001 cgggacgaag ccgtcgagga tgtggctgca cgccgtcgtg cgcacgcctt cggtgcagaa
     3061 caggtccttg atgccgagcg ggatgccctc gagcggacgg ccctccccgc gccgcagatt
     3121 gtcgtcgctc gccgccgctg cggcgagggc gcgatcgggc gtctcgagaa tgtaggcgtt
     3181 gagcgcgcgc gccttctcga ccgccgcgac atgcgccttg gccagctcga cggcggagaa
     3241 ttcctttgcc cgcaggccgt cgcgggcctc ggcgagggag agatcggtca ggtctgtcac
     3301 gatacttgtc tcgtcatccc ggacgggttc ttgcggcccg tccgggatcg tcaggaaatt
     3361 ggtctggcgc cgatcccggc tcgccgcttc gcggccggga cgacgtttcg ttttgtggtc
     3421 gaatgagcga ctgcgtcgct catggatgga tcctcactcg tccgaggatg gtcgagcgac
     3481 tgcgtcgctc atggatggat cctcgggtct cgttttcact cgcccgagga tggtcgaatg
     3541 agcgactgcg tcgctcattc gaccaccttc ggcacgacga agaagttgtc ctcggtggcg
     3601 ggcgcgttgg cgacgatctt gtcgggatag ccgccgtccg tgacgccgtc ggcgcgcttc
     3661 ttcatgagca tcggggtcac cgaggtcatc gcctcgacgc ccccgacatc gacttcgttc
     3721 aattgctcga cgaaggcgag gatggcgttg agctcgcctt gcaggtgcgg cacgtcctcg
     3781 tccgtaatgg cgaggcgggc gagccgcgca atgcgccgca ccgtgacttg atcgaccgac
     3841 atctggagtt cccgtgaaac cgcgcgcgct atagcaccgg cgcgttcgcg gcggcaaccg
     3901 caggcgccct atgccgcccg cgtcttccgg ccgtgacccg gccctgcctg ccttctggtc
     3961 gatgaccttt ccggcaagtg gtctccactt tgccgtctga gctctacgtg atgaccgagc
     4021 ggaagctgga cggggccggc accacgatca cgctctcctt cgtccaggtc tggccgaggt
     4081 agaacgatcc ggccatgacc gcgccaagcg caagcaagag caggagctga cgcaagctct
     4141 cacccccggg cgcgccgtca ccatccgtcg cggcgaacgg cccctgaccg cgcccgacat
     4201 agacgatgtc gccctccggc acgcgcctgg ccgatgcttg catcttgcgc cggcacgcgc
     4261 tggcgccgcg ctcgaccatc gagcgccagc gcagggacag ggacgtgctc gacgaccatt
     4321 tgccgcgccg cagccctcgt gcatcggcca gaaccgacga caccgacaac ggcgtgctca
     4381 gatcgacggt ctgccagccg cgatcgccga gctccttatc gtcgacgacc acgcctggag
     4441 cgctctgggc ggggctgcgc tgcgacttca ctgacgccgg gccttggtta acgaaacctg
     4501 aacggcacta tgccagctgc cggacagcgt gcaatggcac ctgcacgaca aagttaatcg
     4561 caaggcctgt cgtgcccgtc ccggccgttg cgggccaagg aatccggctt cctcagctag
     4621 atgcggatgc tcatattcct gtggggaacg acgacctgga taccgctccc ctccatggcg
     4681 gcgacgaacc ggtcggcggt cgcgtcgatg atcgggaacg agccgtaatg gcacgggatc
     4741 gccgcgcgcg gcttgaaata ccgcgtcacg gcgagggccg ccgtttcgcc gcccatcgtg
     4801 aagcggtcgc cgacggggac gatcaccacg tcgggccgat gcagctcggc gatcagggcc
     4861 atgtcgccga aaatatcggt gtcgcccatg tgatagacgg tcggctcgcc gggggccttg
     4921 aggacgatgc cgttggggtt gccgagggga atcgcgaccc cgtcctccgt gatgctggcc
     4981 gagtgatcgg cgcgcaccag cgtgacggtg aacccgttct ggtcggtcgt gccgccggtg
     5041 ttcatgggat cgaacgcctc gaggcccttc gaagccagcc acatgcagat ctcgaagttg
     5101 ctgacgacct tggcacccgt gcggccggcg atctcgagcg catcgccgac gtgatcgcta
     5161 tgcccatgag tgatgaggat gtgggttgca ccttcgacga gttcgtcccg gttaccctgg
     5221 aacgccggat taccggtgaa gaacggatcg atcagaacga ccttgtcggc aaagtcgagt
     5281 cggaaggtgg aatggccgaa ccaggtgatt ttcatcgacg tgtctccccg aaggcgaaag
     5341 ctttgcgggc gtgatggcgt atcggcacgg cggcaccgct ttgccgaacc catcacgcgg
     5401 cataaagaga gttagagcgg gcgccgctgc aaggttgacg gcgtccgccg tgacggcata
     5461 gccgaacccg tgtcggcgag cgagaccccc agtgcagccg cagaaccagg atcaggatct
     5521 ccaagccctc gcccgcgacc tcgccaaggg cgcgcgcctc atcggcgtcg atctcggcga
     5581 gaagaccatc gggctcgccc tgtcggacgt cgagcgcagc atcgcgacgc ccctcgagac
     5641 cctcaagcgc accaagttca cgcccgacgc ggagcggctg cgcgcgatcg tcagccgctt
     5701 cgtcgtcggc ggcctcgtca tcgggctgcc gctcaacatg gatggttcgg aagggccgcg
     5761 ggcacaggcc acccggtctt tcgcgcgcaa cctcgggccc ttgctcggca tcccgatcgc
     5821 gttctgggac gagcgcctgt cgacggccgc ggtgacgcgg accctgctgg cggccgatgc
     5881 ctcacgggca cgccgcggcg cggtggtcga caagatggcg gccgcctaca tcctccaggg
     5941 cgcgctcgac cgcctcagga gcatcgagtc gtcagctcac gcggaccccg accagccgtg
     6001 aaagggctgc gtcgccgcag ccctcccacg caagccaaca gccgatttca gtgccagcgg
     6061 cggtgatgaa cgaccgcacg ccggaccgcg acccggccgg gcgcccaata ggcgcgccgg
     6121 tatccgccgc cccggtaggc gtgccggtag ccgccgcccc agtaggcgtg ccggtagccg
     6181 ccgtaatagg ggcggtagta ggcgcgccgg tatccccagt acggcctgta gtaggcagga
     6241 gcgtaaccgt aggaatacgg atagtacgag taagagggat agtaggaata agagtaatac
     6301 ggatagctgt agccgtaata cgccggataa tacgagtaat acggatagcc gtagccatag
     6361 ccgtagccgt agccgtagct cgatgcggcg gccgcgccga tcaggccgat ggcggcgccg
     6421 gccgcaaagg ccccgccccc gccccagccg tgacggcgat aaccccagcc gccgtaacct
     6481 ccccaacggt gtccgcccca gccgccgcgc cagcgcacct cggtgg
//
LOCUS       DATAIQ010001061         4460 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_268247, whole genome shotgun sequence.
ACCESSION   DATAIQ010001061 DATAIQ010000000
VERSION     DATAIQ010001061.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4460)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4460)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4460
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_268247"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..882
                     /locus_tag="VHN20_17475"
     CDS             <1..882
                     /locus_tag="VHN20_17475"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEX2727618.1"
                     /translation="HELNSTTRVVEPLVSKDCDWVEVGFGEIGMSKWSMDYGRMQPCS
                     VRAIGDTALGIPELTRLCRSAIDKDASLKGRIAERRKAIGKRHDQTWAKWQDEARQNW
                     DAAPLTVPRLALEVWDVIKDHDWVLAANTLKNWVRRLWDFDKPYRHPGQDLGTGTQIG
                     ISLGVALANKGSGRLVVDLQPDGDLMFDAGALWVAAKYQIPLLIVMYNNRAYYNDWEH
                     QIRMARLRGTDEAKAHIGMDLYGPEPDFAGLARSMGWWAEGPIERPQDVRAALTRAIE
                     QVKKGRPALVDTITQHR"
     gene            complement(1011..1490)
                     /locus_tag="VHN20_17480"
     CDS             complement(1011..1490)
                     /locus_tag="VHN20_17480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018181648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX2727619.1"
                     /translation="MSGHHVEEPRWKHDGVRVIKGDQLDPNTAQTPGMYRQAAVNHAR
                     VGAQKIWAGTVSIQPNAKTGAHHHGELESVIYVVKGKARMRWGENLEFVAEADPGDFI
                     FVPPYVPHQEINANSDEPLECVVIRSDNEAVVVNLPNVEPAEAPEEVYWIDPIHRRP"
     gene            1641..2225
                     /locus_tag="VHN20_17485"
     CDS             1641..2225
                     /locus_tag="VHN20_17485"
                     /inference="COORDINATES: protein motif:HMM:NF014471.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015109 - chromate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015703 - chromate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromate transporter"
                     /protein_id="HEX2727620.1"
                     /translation="MHDNKQPASTSAPVASVSLLQLFLMAFQIGIFSFGGGLTGWIFQ
                     DTVVRRRWMSEDEFLSGLALCQVLPGINVANLMVYIGYRLRGFLGSIVALVGLLVGPF
                     FIVIGLVMIYERVAGVSWVHALMDGAAAAALGLLFLVGFKAAARVGRHPWALAILAIV
                     VVTVGFLQWPLVPVALGLAPFSVAMAWWSTARDA"
     gene            2218..2757
                     /locus_tag="VHN20_17490"
     CDS             2218..2757
                     /locus_tag="VHN20_17490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015109 - chromate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015703 - chromate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromate transporter"
                     /protein_id="HEX2727621.1"
                     /translation="MRDNPYWALIVVFVPFSLVSLGGGASIFAGIQHEAVEVRHWVNS
                     REFIDLFALARGAPGPGSMLVTVLGYKVAGWSGALVATLALFVPASLLCYAVARVWNA
                     HRGKRWHQALETGLSPIATGLVIAGAIAIMRMAGATALSWIVAGGAALVLARWPRVHP
                     LLLLAGGGALFITSQLLPA"
     gene            complement(2762..3754)
                     /locus_tag="VHN20_17495"
     CDS             complement(2762..3754)
                     /locus_tag="VHN20_17495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX2727622.1"
                     /translation="MAKLALTLGCWNYDRTRALADGTVRPDGIDINYLTMPVEETFFR
                     MARYREFDIAEMSLSSYTVSLHSEARPFIAIPVFPSRFFRHSCIYINKQAGIKTPKDL
                     IGKRIGTPEYQMTAPVWIRGILSEHYGVPADSPHYLVGGEEEPDRIEKIKLNLPPNFK
                     VEPIGSGKTLSRMLRDGEIDAFYTARKPSTYETAGDRVGRLFENYVEVERDYYRKTGI
                     FPIMHTVVIRREIYEQNRWVAQALNKAFIESQRLTYEDLKETAALKAMLPWAHAYIEE
                     TRREMGEDFWSYGFEKNRETLATFLRYHYEQGLSKRQLQPEDLFAPETLEAFKI"
     gene            complement(3892..>4460)
                     /locus_tag="VHN20_17500"
     CDS             complement(3892..>4460)
                     /locus_tag="VHN20_17500"
                     /inference="COORDINATES: protein motif:HMM:NF012402.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727623.1"
                     /translation="SMCNITEDGAEWHFQIKLVPSGAATTKLFGGIAVGDAIAVDGPF
                     GMAYLREDAPRDLLCLAGGSGLSPMISIARGFARSDKLAGRSLHFVYGGRAARDICGE
                     PMLRCLPGFGERIFYHPAISMPDADPETTWTGRVGFVHTVAQEMHGENLRDFEIYFAG
                     PPAMADAVQRMLVEMKVPQGQVHFDQFF"
BASE COUNT          711 a         1446 c         1477 g          826 t
ORIGIN      
        1 cacgagctca acagcacgac gcgcgtcgtc gagccgctgg tgtcgaagga ctgcgactgg
       61 gtcgaggtcg ggttcggcga gatcggcatg agcaagtggt cgatggacta cggccgcatg
      121 cagccgtgct cggtgcgggc gatcggcgac acggcgcttg gcatcccgga gctcacgcgc
      181 ctgtgccgga gcgcgatcga caaggacgcg tccctcaagg gccgcatcgc ggagcgccgc
      241 aaggcgatcg gcaagcgcca cgaccagacc tgggcgaagt ggcaggacga agcgcgccag
      301 aactgggacg ccgcgccgtt gacggtgccg cgcctcgccc tcgaagtgtg ggacgtgatc
      361 aaggatcacg actgggtcct ggccgccaac acgctcaaga actgggtgcg caggctctgg
      421 gatttcgaca agccgtatcg gcatccgggc caggatctcg gcaccggtac gcagatcggc
      481 atctcgctcg gcgtggcgct ggccaacaag ggcagcgggc gcctcgtcgt cgacctgcag
      541 ccggatggtg acttgatgtt cgatgccggc gcgctgtggg tggcggccaa gtaccagatc
      601 ccgctcttga tcgtgatgta caacaatcgc gcctactaca acgactggga gcaccagatc
      661 cgcatggcgc ggctgcgcgg caccgacgag gccaaggccc atatcggcat ggacctgtac
      721 ggccccgagc cggacttcgc cggcttggcc cgttccatgg ggtggtgggc ggaagggccg
      781 atcgagcgtc cgcaggacgt gcgggccgcg ctcacgcgcg ccatcgagca ggtcaagaag
      841 ggccgcccgg ccctggtcga caccatcaca cagcaccggt gatgcaatca cctctcccga
      901 tcgcgggaga ggtctggtcg caccgcaggt gcaaccgggt gaggggaaac cgccctcacc
      961 ccacgcgctc ggccctctcc cgcaagcggg agagggttac cggaaggggt tcacggccga
     1021 cggtggatcg gatcgatcca gtagacctcc tcaggcgcct cggccggctc gacattcggg
     1081 agattcacga ccacagcctc gttatccgag cggatcacaa cgcattcgag tggctcgtcc
     1141 gagttggcat tgatctcctg atgcgggacg tatggcggca cgaagatgaa atcccccgga
     1201 tcggcctcgg cgacgaattc cagattctcg ccccagcgca tacgcgcctt ccccttcacg
     1261 acgtagatca cgctctcgag ctcgccgtga tggtgggcgc cagtcttggc attgggctgg
     1321 atcgacaccg tccccgccca gattttctgt gccccaacac gagcgtggtt gaccgccgcc
     1381 tgacggtaca tgccaggggt ctgggcggtg tttgggtcga gctggtcgcc cttgatcacg
     1441 cggacgccgt catgcttcca gcgtggctct tcgacatgat ggccgctcat ggcttttctc
     1501 caacgcaaat gtgaagggcg atcgtaaccg catgacgggc gcgtgttgag tccggcacct
     1561 ccgaaggtta gagccgcatg atgtttttcg gcgaaacggt agcgagttcg ccggatcgat
     1621 gctctaccaa gcaaagccgc atgcacgata acaagcaacc tgcctccacc tccgcgcctg
     1681 tcgcatcggt ctcgctgctg cagctgttcc tgatggcgtt ccagatcggc atcttcagct
     1741 tcggcggcgg gctcaccggc tggatctttc aggacacggt cgtgcgccgc cgctggatga
     1801 gcgaggacga gttcctcagc ggtcttgccc tgtgccaggt gctgcccggc atcaacgtcg
     1861 ccaacctgat ggtgtatatc ggctatcgcc tgcgcggttt tctcggctcc atcgtggcgc
     1921 tcgtcggcct cctcgtcggc ccgtttttca tcgtgatcgg cctggtcatg atctacgagc
     1981 gggtcgccgg tgtgtcgtgg gtgcatgcgc tcatggacgg cgctgcggcc gcggccctcg
     2041 gcctgctatt cctggtcggc ttcaaggccg cggcgcgcgt cgggcgacat ccctgggccc
     2101 tggccatcct cgcaatcgtc gtcgtcacgg tcgggtttct gcaatggcca ctggtccccg
     2161 tcgcgctcgg cctggcgccg ttcagcgtgg ccatggcctg gtggagcacc gcccgcgatg
     2221 cgtgacaacc cttactgggc cctgatcgtc gtcttcgtgc cgttctcgct cgtctccctg
     2281 ggcggaggcg ccagcatctt cgccggcatc cagcacgagg cggtcgaggt gcggcattgg
     2341 gttaactcgc gcgagttcat cgatctgttc gccctcgcgc gcggcgcgcc ggggccaggc
     2401 tccatgctgg tcaccgtgct gggctacaag gtcgccggat ggtcgggcgc cctcgtggcg
     2461 accctcgctt tgttcgtccc ggcttcactg ctctgctacg cggtggcgcg cgtgtggaat
     2521 gcgcaccgcg gcaagcgctg gcatcaggcg ctagaaaccg gcctttcgcc gatcgccacg
     2581 gggctcgtca tcgccggcgc catcgccatc atgcgcatgg ccggcgcaac cgccctatcg
     2641 tggatcgtgg ccggaggcgc cgccctcgta ctcgcgcgct ggccgcgcgt gcatccgctc
     2701 ctgctgctgg cgggcggcgg cgccctgttc atcacctcgc agcttctgcc cgcatgatgg
     2761 gtcagatctt gaaggcctcg agggtctcgg gcgcgaacag atcctcgggc tgcagctgcc
     2821 gcttcgagag cccctgctcg tagtggtagc gcaggaaggt cgcgagcgtt tcgcgattct
     2881 tctcgaagcc gtacgaccag aaatcctcgc ccatctcgcg gcgcgtctcc tcgatatagg
     2941 catgcgccca tggcagcatc gccttgagcg ccgcggtctc cttgaggtcc tcgtaggtga
     3001 gccgctgcga ctcgatgaag gccttgttga gggcctgggc cacccaccgg ttctgctcgt
     3061 agatctcgcg gcggatcacg acggtatgca tgatcgggaa gatgccggtc ttgcggtaat
     3121 agtcgcgctc gacctcgaca tagttctcga acaggcgccc cactcggtca ccggccgtct
     3181 cgtatgtcga gggcttgcgc gccgtgtaga aggcgtcgat ctcgccgtcg cgcagcatcc
     3241 gcgacagggt cttgcccgac ccgatcggct ccaccttgaa gttgggcggc aggttgagct
     3301 tgatcttctc gatccgatcc ggctcctcct cgccgccgac gagataatgc gggctgtcgg
     3361 ccggcacgcc gtaatgctcg gacaggatgc cgcgaatcca gaccggcgcg gtcatctggt
     3421 attcgggtgt gccgatgcgc ttgccgatca ggtccttcgg cgttttgatg ccggcctgct
     3481 tgttgatgta gatgcacgag tgccggaaga agcgcgacgg gaagaccggg atggcaatga
     3541 acggccgcgc ctcggaatgc agcgacacgg tgtaggatga gagcgacatc tcggcgatgt
     3601 cgaactcgcg atagcgcgcc atgcggaaga aggtctcctc gaccggcatc gtgagatagt
     3661 tgatgtcgat gccgtccggg cgcacggtgc cgtccgcgag cgcgcgcgtg cggtcgtagt
     3721 tccagcagcc gagggtgagc gcgagcttcg ccatcgcgga tcttgtctcc agttgagcgc
     3781 cttgggcttc gaattcgacg tccagatctt tgtgtcgcac gatcccggat caagtccggg
     3841 gaaggccttt ctcggcaaag tggtggccac gttgcctgat catgctcgaa atcagaaaaa
     3901 ctgatcgaaa tgaacctgtc cctgcggcac cttcatctcc acgagcattc tctgcacggc
     3961 gtcggccatc gcgggcggtc cggcaaagta gatctcgaaa tcgcgcaggt tctcgccgtg
     4021 catctcctgc gcgactgtat gcacgaagcc gacgcggccc gtccacgtcg tctcgggatc
     4081 ggcgtcgggc atcgagattg cgggatggta gaagatgcgc tcgccgaagc caggcaggca
     4141 gcgcagcatc ggctcgccgc agatgtcacg cgcggcgcgg ccgccataca cgaaatgcag
     4201 ggagcggccc gccagcttgt cgctgcgcgc gaagccgcgc gcgatcgaga tcatcggcga
     4261 caggccggag ccgcccgcca ggcacagaag gtcgcgtggc gcgtcctcgc gcagataggc
     4321 catgccgaac ggcccgtcga cggcgatggc gtcgccgacg gcgatgccgc cgaaaagctt
     4381 cgtcgtcgcg gcgccgctcg gaacgagctt gatctggaag tgccactcgg cgccgtcttc
     4441 cgtgatgttg cacatggaat
//
LOCUS       DATAIQ010001062         2106 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_223265, whole genome shotgun sequence.
ACCESSION   DATAIQ010001062 DATAIQ010000000
VERSION     DATAIQ010001062.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2106)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2106)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2106
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_223265"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            379..1125
                     /locus_tag="VHN20_17505"
     CDS             379..1125
                     /locus_tag="VHN20_17505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727624.1"
                     /translation="MASFNDWLRENQNKRDDTNALWVAATTLGREWPRSSLDKADYED
                     AIAKESDPAARARLLETLNRDWRAFRLTLTEEPQPAGSAGQSSWRLAAIGKFFAANAG
                     VIATTLLVLVLAYFLSAIFSNELLDHLKDVPTARGLITFLFAFTTVGIFFIVVASNFL
                     SNLQGDEFAKRYQNGKDVLTLLIGVFGTIIGFYFGQATTTSPNPPNVVVQTPPPPSPP
                     AQPPAPPVSPSQPIPPGPTNPGNVPSSTPG"
     gene            1289..1879
                     /locus_tag="VHN20_17510"
     CDS             1289..1879
                     /locus_tag="VHN20_17510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEX2727625.1"
                     /translation="MNDLVVLSAAGFVAGVMDAMAGGGTFVTIPALVWAGTPSLVANA
                     SSTVALFPGQLASTCAYRGTLADLGAVSLRSLLVVSVSGGFVGSLLLLLTPERAFDVI
                     VPWLLLIATLAFAFGARAGAVRSRNLRRLFRRRRRHHDDGGVEPSSVCRPEGHDAGAH
                     VPHGSHQCRRGDLLHGRGHCRVDRDAGDAGCRDRRW"
BASE COUNT          327 a          701 c          664 g          414 t
ORIGIN      
        1 cgatgaacgc cgcctaacct gcgttccggg ttgcctccac cccgtggaag cggccctttt
       61 ctttcttcgc tccgatttgg ggggccactc caggccgctc cggagcgggt tctcccgccc
      121 cgttccggcg ggcgacgcgg ccggcccgcg ccgcacacgc ggagcgggtg gacatcgctg
      181 ccggccgccc atcgcgcgat ttttcttgca agtttcggag ccgcggccaa agcttagcgc
      241 acgatccggc gaagtggata ccgcttcacc ggcaaagact tgtcccggcc ctgccgggac
      301 catgcggccc gatgagaata gatcggccaa ttcgatcgga attggccccg ctctggctgg
      361 cgagctttgg aggggtccat ggcatcgttc aacgactggc ttagggaaaa ccagaacaag
      421 cgcgacgata cgaatgcgct atgggtggcc gccacgaccc tcggccggga gtggccgagg
      481 tccagcctcg acaaggccga ctacgaggac gccatcgcga aagaaagcga tccggcggcc
      541 cgcgcgaggc tgctcgagac cttgaacagg gactggcgcg ctttcaggtt aactctgacc
      601 gaggaacctc agccggccgg cagcgcaggc cagtcctcct ggaggctcgc ggccatcggg
      661 aaatttttcg cggcgaatgc gggtgtgatc gcgaccacct tgctcgtcct ggtgctggca
      721 tatttcctga gcgcgatttt ttcaaacgag ctgcttgacc acttgaaaga tgtcccgacg
      781 gcgcgcggac tgatcacgtt cctgttcgca ttcacgacgg tcggaatttt cttcatcgtc
      841 gtggcgtcga acttcctgag caacctgcag ggcgatgaat tcgccaagcg ctaccagaac
      901 ggcaaggacg tattgacgct gctgatcggt gtgttcggaa cgatcatcgg attctatttc
      961 ggtcaggcca cgacgacgag tcccaaccca cctaacgtcg tcgtccagac gcctccgccg
     1021 ccgagtccgc cggctcagcc gcccgctccg ccggtctccc cgagccagcc catcccgccg
     1081 ggcccgacga atcccggcaa cgtgccgagc tcgaccccag gctagcccag gtgggcacca
     1141 ttcgacgaag cgatcgttgc tgacctcgcc ctcgcgcgcc cgccatagca tgcacgtccg
     1201 gcgctgctga cggccttcgg ccttttcgaa ggctgcctca aaagagccgc gcattgtccg
     1261 gtggctgcgc gctcccgtaa gtcgacatat gaacgatctc gtggtgttga gcgccgccgg
     1321 cttcgtcgcc ggcgtaatgg acgcgatggc gggcggcggc acattcgtga cgattccggc
     1381 gctcgtctgg gccgggacgc cttcgctcgt cgccaatgcc tcgagcacgg tggcgctctt
     1441 ccccggacag ctggcgagca cctgcgctta tcgcggcacc ctcgccgatc tcggcgccgt
     1501 ctcgctgcgc agccttctgg tggtcagcgt cagcggaggc ttcgtcggat cccttctgct
     1561 gctgctcacc ccggaacgcg ccttcgatgt gatcgttccg tggctgctgc tgatcgcgac
     1621 gctggctttc gcgttcggcg cgcgggccgg cgcagttcgt tctcgcaatt tacggcggct
     1681 atttcggcgg cggcgtcggc atcatgatga tggcggcgtg gagccttctt cagtctgccg
     1741 acctgagggt catgacgccg gcgcgcacgt gcctcatggc agccaccaat gccgtcgcgg
     1801 tgatctgctt catggtcgcg ggcattgtcg agtggatcgc gacgctggtg atgctggttg
     1861 ccgcgatcgc cggtggtaac gcaggtgcgc gcctgtcctc gtcatgaacg tcaaggtgct
     1921 tcgcgccgtg atcctcgtga atcagcagcg cgatgaccct cgcgtctttt cagcgtgctt
     1981 actgaaggat caagaaagct aaccttccgg cttgcgttcg tcgcgggcca ggcatcgtca
     2041 cttccttcgt tgaccgccgg aggcgtcgcg cgcggccagg ctcggatcgc tgagatgctc
     2101 caccgt
//
LOCUS       DATAIQ010001063         3100 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_75293, whole genome shotgun sequence.
ACCESSION   DATAIQ010001063 DATAIQ010000000
VERSION     DATAIQ010001063.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3100)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3100)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3100
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_75293"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..325)
                     /locus_tag="VHN20_17515"
     CDS             complement(<1..325)
                     /locus_tag="VHN20_17515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727626.1"
                     /translation="MTGAELLQEIATFWKVDRAHTRWREDGFDWQPGSYLVRVRAFAP
                     REKNPDARWRLTVETELVRSLSIDDATFADELACFGPVMTPTYSLVYPSHPSMTAVGD
                     GAFGLR"
     gene            768..2639
                     /locus_tag="VHN20_17520"
     CDS             768..2639
                     /locus_tag="VHN20_17520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007689035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEX2727627.1"
                     /translation="MTAHPGKPELRAAAALERPAPSQGNTLWASDVAAEVLRTLDIPF
                     VALNPGASFRGLHDSLVNHTGNAAPQMLLCLHEEHAVAIAHGWAKVTERPMAAIVHSN
                     VGLMHASMAVFNAWCDRVPLLLLGATGPVDATRRRPWIDWIHTAKDQAALVRHYVKWD
                     DQPASVGALVEALLRSHQIARTAPCGPTYVCLDAALQESQIDAVPAMPSLERFKAPRR
                     AAPDADLLTAAADLLAGARRPLILAGRVGRGTDAWEARIRLAEAAGALVLTDLKTAAA
                     FPTAHGLHAAPAGTFATPQALDVLRQADVVLSLDWIDLAGTLKAAFGESPPPSKIIHV
                     SVDMHVHNGWSMDHQSLPPVDIHFLNEPDAVTAGLLAALGGAAKTISSEWLGARRDGP
                     QVADAPDPHGQITIPEIAHDVRRALRGHDACLIRGPFSWAGHLWPIEHPLDYLGIDGG
                     AGLGSGPGIAVGAALALRDSGRIALSIFGDGDFMMGCQAIWTAAHYRVPLIVIVSNNQ
                     SFFNDELHQERMAKQRGRLVENKWIGQRIADPDIDIAMLARAQGAVGLGPVTSHDELR
                     VALDEAVARYRDGRVVVVDVRVQPGYDPNTTRLTTSEGLAGPGGDRGGSRGGTGKDR"
     gene            2636..>3100
                     /locus_tag="VHN20_17525"
     CDS             2636..>3100
                     /locus_tag="VHN20_17525"
                     /inference="COORDINATES: protein motif:HMM:NF025091.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase/PEP mutase family protein"
                     /protein_id="HEX2727628.1"
                     /translation="MMARGTLRDALAAEFPLVTALAHDALSARLIQRAGFRAFNVGGS
                     ALLAVRHALPDIGLIGLKEMVDGIRDIAAATDLPFIADADDGYGDVKAVARTVAEYEA
                     IGVGGMLIEDQLRDSKQQRADKSSAVVDEAVIELKLRAALATRNSRETLIIGR"
BASE COUNT          527 a         1091 c         1006 g          476 t
ORIGIN      
        1 atctgagacc gaaggcgccg tcgccaacgg cggtcattga aggatgcgac ggatacacga
       61 gcgagtaggt gggcgtcatg acagggccga agcaagcgag ttcgtccgca aaagtcgcat
      121 catcgatcga gagcgacctg acaagctccg tttcgaccgt aaggcgccat cgtgcgtccg
      181 ggttcttctc acggggcgca aatgccctga cccggaccag gtaactgccc ggctgccagt
      241 cgaacccgtc ttcgcgccag cgcgtgtggg cccggtcgac cttccaaaac gtggcgatct
      301 cttgcagcag ctccgcaccg gtcatgacgc gctcctggaa tggagggctc ggcacttggc
      361 caatcttaca atgaaaattt tccctgagca ctctcccgga tgctgctcgc agcaaaaatt
      421 tccgcaggcg cgcgcttcag gcttactacc ggccagacgc atacgtgagc cgaggtgcat
      481 accgtgcgcg acagcgacgc gatccagcat ctccttccga agaggcacgt tcagcgcgtc
      541 atattagaaa ttttcatacg aaccaaaaaa tttgcacttg cggcgtgcgg aggccatccg
      601 gcatccttcg aggaacagaa cagcaaaacg atgatttggg agggaaacga tggctggccc
      661 cgctggcggc acgctcgagc caaaattcat ggcaagcctg cagccctgct gacctcaacc
      721 tgccgcaatc gctcgaatgc ccgagggaag atgaagggac gctgcacgtg acggcacatc
      781 ccggcaagcc tgaattgcgc gccgctgccg ccctcgagcg ccccgcgccc tcgcagggca
      841 ataccctgtg ggcgagcgac gtcgccgccg aagtcctgag gaccctggac atcccgtttg
      901 ttgccctcaa tcccggcgcc agctttcgcg gtctccacga cagcctcgtc aaccacaccg
      961 gaaacgccgc gccgcagatg ctgttgtgcc ttcacgagga gcacgcggtg gcgatcgcgc
     1021 atggctgggc caaagtcacg gagcggccga tggccgccat cgtgcacagc aatgtcggcc
     1081 tcatgcatgc cagcatggcc gtgttcaacg cctggtgcga tcgcgtgccg cttcttctcc
     1141 tcggcgcgac gggtccggtc gacgcgacca ggcggcggcc ctggatagac tggatccaca
     1201 cggccaagga ccaggccgcg ctcgtccggc actacgtcaa atgggacgac cagccggcgt
     1261 cggtcggagc gctcgtcgag gcactgctgc gctcgcatca gatcgcgcgc acggcgccat
     1321 gcgggccgac gtatgtctgt ctcgatgcgg cccttcagga gtcccagatc gacgccgtgc
     1381 cggcgatgcc gagcctcgag cggttcaagg cgccgcggcg agccgcgccc gatgccgatc
     1441 tcctgaccgc cgcggcggat ctgctggccg gggcgcgccg ccccctcatc ctggccggcc
     1501 gcgtcgggcg cgggacggac gcgtgggagg cgcgcatccg cctcgccgaa gccgcgggcg
     1561 cgctggtcct gaccgacctg aagacagcgg ctgcgttccc gacggcgcac gggctgcacg
     1621 cggcccctgc cggaaccttc gccaccccgc aggcgctcga cgtacttcgc caggcggacg
     1681 tggtcctcag ccttgactgg atcgacctgg cgggcacgct caaggctgcc ttcggcgaga
     1741 gcccgccgcc gtcaaaaatc atccatgtct ccgtcgacat gcatgtccac aacggctgga
     1801 gcatggatca ccagagcctt ccgcccgtcg acattcactt cctgaacgag cccgatgcgg
     1861 tcacggccgg tctcctcgcc gctctcggcg gggcggccaa gaccatctcg tccgagtggc
     1921 tcggcgcccg ccgcgatggc cctcaggtcg ccgacgcacc cgacccgcac ggacagatca
     1981 cgatccccga aatcgcccac gacgtgcgcc gcgcgctgcg cggccacgac gcatgcctga
     2041 tccgcggccc gttctcctgg gcaggccacc tctggccgat cgagcatccg ctcgattatc
     2101 tcggcatcga cggcggcgcc ggcctcggct ccgggcccgg cattgccgtc ggcgccgcgc
     2161 tggcgctgcg cgacagcggc cgcatcgccc tgtcaatctt cggcgacggc gacttcatga
     2221 tgggctgcca ggcgatctgg actgctgcgc attatcgcgt cccgctcatc gtcatcgtgt
     2281 ccaacaacca gtcgttcttc aacgacgagc tgcatcagga gcggatggcg aagcagcgcg
     2341 gccgcctggt cgagaacaag tggatcgggc agcgcatcgc cgatcccgac atcgacatcg
     2401 ccatgctggc ccgggcgcaa ggcgccgtcg gtctcggccc ggtgacgtcg catgacgaat
     2461 tgcgggtcgc cctcgacgag gcggtcgcgc gctatcgcga cgggcgcgtg gtggtggtcg
     2521 atgtgcgcgt gcagccgggc tacgacccga acacgacgcg gctcacgacc agcgagggcc
     2581 tcgccgggcc aggcggcgac cgcggcgggt ctcgcggcgg caccgggaag gatcgatgat
     2641 ggcgagaggg acgcttcgcg acgcgctcgc cgccgagttc ccgctcgtca cggccctggc
     2701 ccacgacgcg ctctcggcgc gcctgatcca gcgcgccggc tttcgcgcgt tcaacgtcgg
     2761 cgggtcggcg ctgctcgccg tccgccatgc cctgcccgac atcggcctga tcgggctcaa
     2821 ggagatggtg gacggcatca gggacatcgc cgcggcgacc gacctgccgt tcatcgccga
     2881 cgccgatgat ggctatggcg acgtgaaagc ggtcgcccgc acggtggcgg aatacgaagc
     2941 catcggcgtc ggcggcatgc tgatcgagga ccagctgcgc gacagcaagc agcagcgcgc
     3001 cgacaagtcg tcagcggtcg tcgacgaagc cgtcatcgag ctgaagctgc gcgccgcgct
     3061 tgccacccgc aacagccgcg agaccctgat catcggccgg
//
LOCUS       DATAIQ010001064         1605 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_167842, whole genome shotgun sequence.
ACCESSION   DATAIQ010001064 DATAIQ010000000
VERSION     DATAIQ010001064.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1605)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1605)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1605
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_167842"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(200..418)
                     /locus_tag="VHN20_17530"
     CDS             complement(200..418)
                     /locus_tag="VHN20_17530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009337677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727629.1"
                     /translation="MISGPGTAMGYSVWHWIFFALGVALVVYPTGRILARLGFSPLWA
                     VVVFIPFFNVLGLWVLAFAEWPRDAGAP"
     gene            complement(415..>1605)
                     /locus_tag="VHN20_17535"
     CDS             complement(415..>1605)
                     /locus_tag="VHN20_17535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006200979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042625 - ATPase-coupled ion transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HEX2727630.1"
                     /translation="YWWIGQTLLFALTLTITVFVIACPDALGLATPMAVMVGTGLGAT
                     NGILFKNAAALEDATKLDVIVFDKTGTLTMGQPKVVDIVLAPGITPDEVLRIAAAVEQ
                     GSDHPLALAIVERARGISVPAIGGFLNIEGKGARADIDGTPVFLGNRRLMDEQTIDFA
                     GLGDTAEALKGAGRTVVHVAHGRRLLGLIAIADAPRPSAKLTIRRLRERGVKVAMLTG
                     DNAGTAQRIGDELGIDIVLADVLPGQKASKVKELQAQGLKVGMVGDGVNDAPALTQAD
                     VGFAIGAGTDVAIESADVVLMKSDPYDVVGAIELSRATLRKMHQNLWWAAGYNIIASP
                     IPAGVFYPFLLSPEIAALAMSGSSALVAANALLLKRTRLRESAAEAAAPTGFDVSRAE
                     RATA"
BASE COUNT          285 a          526 c          534 g          260 t
ORIGIN      
        1 tggattggcg tgctcagcag gatcagaagg gcgataaatg ccgcctcgac ggcagctaac
       61 gcggacatcg ctttattggg cggaccgcgc cggtgaagcg tcatcttcat ggtcgtatcc
      121 ttattatgaa taccccccga cccccggcgc ggaacgaagc gcaccgcaat ccgacggagg
      181 acgcggatgg gcgcatgact tacggcgccc ccgcatcccg cggccactcg gcgaatgcga
      241 gcacccataa tccgaggaca ttgaaaaacg ggataaatac caccacggcc cacaatgggg
      301 agaagccgag ccgagcgaga atgcggccgg tgggataaac cacgagcgcg acgccgaggg
      361 cgaagaagat ccaatgccag accgaatagc ccattgctgt gccgggaccg gagatcatgc
      421 ggttgctcgt tccgcccggg agacatcgaa cccggtcggc gccgccgctt cggcggcgct
      481 ttcgcggagc ctggtccgct tgagcagtag cgcattggcc gcgacgaggg cagaactgcc
      541 cgacatggca agcgccgcga tctccgggct gagcaggaag ggataaaaaa ccccagcggg
      601 gatgggagag gcgatgatgt tgtagccggc cgcccaccag aggttctggt gcatcttgcg
      661 taaggtcgcg cgcgacagct cgatggcgcc gaccacgtcg tagggatcgc tcttcatgag
      721 gaccacatcg gcgctctcga tggccacgtc ggttcccgcc ccgatggcga agccgacgtc
      781 cgcctgcgtg agggcggggg cgtcgttcac cccatcgccc accatgccga ccttgaggcc
      841 ctgcgcctga agctccttca ccttgctcgc tttctggccc ggcagcacgt ccgcgagcac
      901 gatgtcgatg ccgagttcgt cgccgatgcg ctgcgccgtg ccggcgttgt cgccggtcag
      961 catggcaacc ttgacgccgc gctcgcgcag gcggcggatg gtcagctttg cgctcggccg
     1021 cggcgcgtcg gcgatggcga tcagcccgag gagccgtcgc ccgtgcgcca catggacgac
     1081 ggtgcggccg gcgcccttca gggcctcggc cgtgtcgccg aggccggcga agtcgattgt
     1141 ctgctcgtcc atgaggcgcc tgttgccgag gaacaccggc gttccgtcga tgtcggcccg
     1201 cgcgcccttt ccctcgatat tcagaaagcc tccgatggcg ggcacggaaa tccccctggc
     1261 tctctccacg atagctagag cgagaggatg gtccgagcct tgctcgaccg ccgcggcgat
     1321 gcggagcacc tcgtccgggg tgattccggg cgccagcacg atgtcgacta ccttaggctg
     1381 tcccatggtc agggtgccgg tcttgtcgaa gacgatcacg tcgagcttcg tcgcgtcctc
     1441 gagggccgcg gcgttcttga acaggatgcc gttcgtggcg ccgagccccg tcccgaccat
     1501 caccgccatc ggcgttgcga ggccgagggc atccggacac gcgatgacga aaacggtgat
     1561 cgtcaacgtg agcgcgaaca ggagcgtctg gccgatccac cagta
//
LOCUS       DATAIQ010001065         1896 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_75603, whole genome shotgun sequence.
ACCESSION   DATAIQ010001065 DATAIQ010000000
VERSION     DATAIQ010001065.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1896)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1896)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1896
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_75603"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..401)
                     /locus_tag="VHN20_17540"
     CDS             complement(<1..401)
                     /locus_tag="VHN20_17540"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014762590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HEX2727631.1"
                     /translation="MDETAARDAFDEALRTHRPDFGTFFLARLFGLEISYTDETCVVE
                     VPVRDFMFNPQGSLHGGVIAFALDVSMGHLIRHTLGRPGITLEMKTQYLRPALSGRVR
                     CEGRFLRRGRTINYLESRMTDAEGKLLAVATS"
     gene            complement(411..>1896)
                     /locus_tag="VHN20_17545"
     CDS             complement(411..>1896)
                     /locus_tag="VHN20_17545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009467761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HEX2727632.1"
                     /translation="AILLDPYMIGVILTGTVLGVIVGALPGLSGSTTAALLLPLTIGM
                     GPVASVAFLGSIYCAANFGGSITAILINTPGDPSASATAYDGYPMAARGEAGRALGMS
                     AVASAIGGIYSIIVMIIAAPLLARAAYNFGPPEYFALALFGLSMLAAVGSDAGIRNLI
                     AGVLGVLLATVGLDLTTGVERFTFGVPELTEGLNLVPVLTGLFAISEMLVQASELHIV
                     RHRLALTAVRLPSLADFRKCFKAINLSCQIGVFIGILPALGATAAALISYNETKRWSK
                     YKHEFGKGAIEGVAGPEAANNAAVGGNMVPTLALGIPGSATTAIILAGLIVQGVRPGP
                     HLFTEQPMLLYAVFSSMLASNLIYLVLGLFAAKVFARITLIPDTFLWPAVFVFAVVGA
                     YGPNQSMTDVWVMLIFGVIGFFFRRFGFSPAPLVMGLVLGTMVEETLKQSLIIFDQNW
                     LMFFSRPIVVALFVVTLLSVFTPLIARTLRAAMRRREPLNPIEE"
BASE COUNT          361 a          585 c          682 g          268 t
ORIGIN      
        1 gacgtcgcca cggccagcag cttcccctcg gcgtcggtca tgcgcgattc caggtaattg
       61 atggtgcggc cgcggcgcag gaagcggccc tcgcaacgca cgcggccgct cagcgcgggg
      121 cgcagatact gcgtcttcat ctcgagcgtg atgcccggcc ggccaagcgt atgccggatc
      181 aggtgcccca tcgacacgtc gagcgcgaag gcgatgacgc cgccatgcag gctgccctgc
      241 gggttgaaca tgaagtcgcg gaccggcacc tccacgacgc aggtctcgtc cgtgtaggag
      301 atctcgaggc cgaacagcct tgcgagaaag aaggtgccga aatcggggcg gtgcgtgcgc
      361 agcgcctcgt cgaacgcgtc gcgcgcggcc gtctcgtcca tcagacgctc ctattcttcg
      421 atcgggttga gaggctcccg cctgcgcatc gcggcgcgca aggtgcgggc gatcaggggc
      481 gtgaacacgc tcagcagggt gacgacgaac agggccacga cgatcggtcg cgagaagaac
      541 atcagccagt tctggtcgaa gatgatcagc gactgcttga gcgtctcctc gaccatcgtg
      601 ccgagcacga ggcccatgac cagcggcgcc ggcgagaagc cgaagcggcg gaagaagaag
      661 ccgatgacgc cgaagatcag catgacccag acgtcggtca tcgactggtt cgggccgtag
      721 gcgccgacga ccgcgaacac gaacaccgca ggccatagaa acgtgtcggg gatcagggtg
      781 atgcgcgcaa agaccttggc cgcgaacagg ccgagcacga gatagatcag gttggaggcc
      841 agcatcgacg agaagacggc gtagagcagc atcggctgct cggtgaagag atgcgggccg
      901 gggcgcaccc cctgcacgat caggcccgcg aggatgatgg ccgtcgtggc gctgccggga
      961 atgccgagcg cgagggtcgg caccatgttg ccgcccacgg ccgcgttgtt ggcagcttcc
     1021 ggtccggcga cgccttcgat cgcccccttg ccgaactcgt gcttgtattt cgaccagcgc
     1081 ttggtctcgt tgtacgagat cagcgccgca gcggtggcgc caagcgccgg aaggatgccg
     1141 atgaagacgc cgatctggca ggacaggttg atcgccttga agcacttgcg gaagtcggca
     1201 aggctcggca gccgcacggc cgtcagggcg aggcgatggc gcacgatgtg caactcggac
     1261 gcctgcacga gcatctcgct gatcgcgaac aggccggtga gaacgggaac gaggttgagg
     1321 ccttcggtca gttcgggaac gccgaaggtg aagcgctcga cgccggtcgt gaggtcgagc
     1381 ccgacggtgg caaggagcac gccgagcacg ccggcgatca ggttgcggat gccggcgtcg
     1441 ctgccgacgg cagccagcat cgacagcccg aacagcgcca gcgcgaaata ttcgggcggc
     1501 ccgaaattgt aggccgcccg cgccagcagc ggagcggcga tgatcatgac gatgatgctg
     1561 tagatgccgc cgatggcgct cgccacggcc gacatcccga gggcgcgtcc cgcttcgccg
     1621 cgggctgcca tgggatagcc gtcataggcg gtcgccgaag ctgaagggtc gcccggcgtg
     1681 ttgatcagga tggccgtgat cgagccgccg aaattggcgg cgcagtagat cgagccgagg
     1741 aatgcgacgc ttgccaccgg ccccatgccg attgtcagcg gcaggagcag ggcggcggtc
     1801 gtgctgccgc tgaggccggg cagggcgccg acgatcacgc cgagcacggt gccggtgagg
     1861 atgaccccga tcatgtaggg atcgagcagg atggcc
//
LOCUS       DATAIQ010001066         1672 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_224048, whole genome shotgun sequence.
ACCESSION   DATAIQ010001066 DATAIQ010000000
VERSION     DATAIQ010001066.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1672)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1672)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1672
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_224048"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..856
                     /locus_tag="VHN20_17550"
     CDS             <1..856
                     /locus_tag="VHN20_17550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020185569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004427 - inorganic diphosphate
                     phosphatase activity [Evidence IEA];
                     GO_function: GO:0009678 - diphosphate hydrolysis-driven
                     proton transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sodium/proton-translocating pyrophosphatase"
                     /protein_id="HEX2727633.1"
                     /translation="FAANELAGIYGVAVAVMAQLSLTGLIVALDAFGPITDNAGGIAE
                     MADMPEDVRNVTDPLDAVGNTTKAVTKGYAIGSAALAALVLFAAFKIELQAELGKPVL
                     FAIDDPEVLIGLLIGGLMVCLFAALSMEAVGRAGGAVVEEVRRQFREKPGIMEGTEKP
                     EYGQCVDIVTKSAQREMIIPSLIPIVFTVIVGVLSYKALGGLLIGVIVVGLFFAILMT
                     AGGGAWDNAKKLIEDGAFGGKGSEAHAASVTGDTVGDPFKDTAGPAINPMIKVANIVA
                     LLIIPLVA"
     gene            1095..>1672
                     /locus_tag="VHN20_17555"
     CDS             1095..>1672
                     /locus_tag="VHN20_17555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727634.1"
                     /translation="MHRSTVRVHRALLLAGVALAALAAVPAAAHVIDPAARQAQLPGG
                     GGIGPVELEGLRNARVFDPRTRSWSQAQHMHYGRWYPSGVRLPDGQVMAFGGVTKLVK
                     NNQLINVKQTETFNPRTGTWTEHDEDLSPTASLPLYPRLHLMPNGKVFYAGNGQNWGP
                     FGQSPESAAWALQRFYDLKTHRWQVVGPAPAGV"
BASE COUNT          248 a          610 c          576 g          238 t
ORIGIN      
        1 cttcgccgcc aacgagctcg ccggcatcta cggcgtcgcc gtggccgtga tggcgcagct
       61 ctcgctgacc ggcctgatcg tcgcgctcga cgcgttcggc ccgatcaccg acaacgccgg
      121 cggcatcgcc gagatggccg acatgccgga ggacgtccgc aacgtcaccg acccgctgga
      181 cgcggtcggc aacaccacga aggccgtcac caagggctac gcgatcggct ccgccgcgct
      241 cgccgccctc gtgctcttcg cggcgttcaa gatcgagctc caggcggagc tgggcaagcc
      301 cgtgctgttc gccatcgacg acccggaggt gctgatcggc ctgctcatcg gcggcctgat
      361 ggtctgcctg ttcgccgcgc tctcgatgga ggccgtcggc cgcgccggcg gcgccgtcgt
      421 cgaggaggtc cgccggcagt tccgcgagaa gccggggatc atggagggca cggagaagcc
      481 ggagtacggc cagtgcgtgg acatcgtcac caagtcggcg cagcgcgaga tgatcatccc
      541 gtcgctgatc ccgatcgtct tcacggtgat cgtcggcgtc ctctcctaca aggcgctcgg
      601 cggactgctg atcggcgtca tcgtcgtcgg cctcttcttc gccatcctca tgaccgccgg
      661 cggcggcgcg tgggacaacg cgaagaagct gatcgaggac ggcgccttcg gcggcaaggg
      721 ctcagaggcc cacgccgcgt ccgtcaccgg cgacacggtc ggcgacccgt tcaaggacac
      781 ggccggcccg gccatcaacc cgatgatcaa ggtcgccaac atcgtggcgc tcctgatcat
      841 cccgctggtc gcctagctcc ggcggcgtca ggtgtgcccg gcgggcggcc gagcggccgc
      901 ccgccgccgc cggcggcggc gcgtgacggc gcgcggtgat cgccggcgca ccccgaaacg
      961 gttcaatctc tgaccgatca ccttgacggt gcacgattgc gcgggagggt ggccgcttcg
     1021 cagtcagaga tccggaggca tgaggccgcc ggcgtccatg gccactgacc ggccggccgt
     1081 caggggaggc cgccatgcac cgctcgaccg tccgcgtcca tcgcgcactg ctgctcgccg
     1141 gagtggcgct cgccgcgctc gccgccgtac cggcggcggc gcacgtcatc gatcctgccg
     1201 cgcgccaggc gcagctgccg ggaggcggcg gcatcgggcc cgtggagctc gaggggctcc
     1261 gcaacgcccg ggtgttcgat cctcgcacgc gctcctggag ccaggcgcag cacatgcact
     1321 acggccgctg gtacccatcc ggcgtgcgcc tgcccgacgg acaggtgatg gccttcggcg
     1381 gcgtcacgaa gctggtcaag aacaaccagc tcatcaacgt caagcagacc gagacgttca
     1441 acccgcgaac ggggacgtgg accgagcacg acgaggatct cagcccgacc gcgtcgctgc
     1501 cgctgtaccc gcggctgcat ctgatgccca acggcaaggt cttctacgcc ggcaacgggc
     1561 agaactgggg cccgttcggc cagtcccccg agagcgcggc ctgggcgctg cagcgcttct
     1621 acgacctcaa gacgcaccgc tggcaggtgg tcggccctgc gcccgccggc gt
//
LOCUS       DATAIQ010001067         1771 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_361866, whole genome shotgun sequence.
ACCESSION   DATAIQ010001067 DATAIQ010000000
VERSION     DATAIQ010001067.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1771)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1771)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1771
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_361866"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1072)
                     /locus_tag="VHN20_17560"
     CDS             complement(<1..1072)
                     /locus_tag="VHN20_17560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020178143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX2727635.1"
                     /translation="MTREEKKVILASSLGTVFEWYDFYLYGSLAVIIGAQFFSAFDVT
                     TRNVFALLAFAAGFFVRPFGALFFGRIGDLVGRKYTFLITIVIMGTSTFLVGLLPSYE
                     QIGWIAPVVLIALRMLQGLALGGEYGGAAVYVAEHAPVGRRGFYTSWIQTTATVGLLL
                     SLVVILTLRVWMGEAGFQRGEGYWIAGWRIPFLLSVVLLAISVWIRLQMQESPAFKKM
                     KEEGTQSKAPLSEAFGQWHNAKIVIFALLGLVAGQAVVWYTGQFYALFFLQSILKVDL
                     FTSNVLIAWSLILGTGGFILFGALSDRIGRKPIILGGCLIAAITYFPLFGLLTSLANP
                     QLARALETSKVQVVADPATCGSV"
     gene            1507..>1771
                     /locus_tag="VHN20_17565"
     CDS             1507..>1771
                     /locus_tag="VHN20_17565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011475220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX2727636.1"
                     /translation="MPNDPSSTIIIADDHPLFRGALRQAVGSLLPGSKVIEAGGLDEL
                     TLTLERDKDVDLVLLDLTMPGVQGFSGLLYLRAQFPQVPVVIVS"
BASE COUNT          332 a          553 c          608 g          278 t
ORIGIN      
        1 acaccgagcc gcaggtggcg ggatcggcga cgacctggac cttcgacgtt tcaagggcgc
       61 gggcgagttg cgggttggcg aggctcgtca ggaggccgaa gagcgggaag taggtgatcg
      121 ccgcgatcag gcagccgccc aggatgatcg gcttgcggcc gatccggtcc gacagcgcgc
      181 cgaacaggat gaacccgccg gtgccgagga tcagcgacca ggcgatcagc acgttcgagg
      241 tgaacaggtc caccttgagg atgctctgga ggaagaacag agcgtagaac tggccggtgt
      301 accagaccac ggcctggccg gcgacgagac ccagcagcgc gaagatgacg atcttggcgt
      361 tgtgccactg cccgaaagcc tcggagagcg gcgccttgga ctgggtgccc tcctccttca
      421 tcttcttgaa ggcgggcgat tcctgcatct gcaagcggat ccagaccgaa atcgcgagca
      481 ggacgacgga gagaaggaac gggatgcgcc agccggcgat ccagtagcct tcgccgcgct
      541 ggaagccggc ctcgcccatc catacgcgca gcgtcaggat cacgaccagc gacagcagaa
      601 gcccgaccgt cgcggtcgtc tggatccagc tggtgtagaa gccacggcgc ccgacggggg
      661 catgctcggc cacgtagacc gcggcgccgc catactcgcc gccgagggca aggccttgca
      721 gcatgcgcag ggcgatcagc acgaccggag cgatccagcc gatctgctca taggaaggca
      781 gcaggccgac caggaaggtc gaggtgccca tgatcacgat cgtgatcagg aaggtgtatt
      841 tgcgcccgac caggtcgccg atacggccga agaagagcgc gccgaacggg cgcacgaaga
      901 accccgccgc gaaggcgagc agcgcaaaca cgttgcgggt ggtcacgtcg aacgcagaga
      961 agaactgcgc gccgatgatg acggccagcg agccgtaaag gtagaagtcg taccactcga
     1021 acacggtgcc gagcgaggag gcgagaatga ccttcttctc ctcccgcgtc atcggacggg
     1081 cccgggaacc gggcgcaact gctgcggtct gtgccatctc ggcgtcctcc ttagctgtcc
     1141 gccggccggc ttctcgggca cgctgcggcg ggattacggc tagagttgtt caactacata
     1201 cgattgtcgg ctttgtcgct gccccattgg tcgtgcgact ttcgtcggag gcgcggaggc
     1261 ccgaggctcg cggccgacgg cgcgtgcgcg ggtcaggtgg ctggcacggc ggcccgcagc
     1321 cggccagaag atggagcatt attcggccag tggcatcccg gcatttagta gtattcggtg
     1381 cgcgcctctc ttccgattcg cccgctagat cctgcctgac ttcatggaat acttcccgtc
     1441 cacgcgcgcg ggcggacgat ggcggaaagc cgcgatatcg gtataaggct agccgcggag
     1501 gacactttgc cgaacgatcc cagcagcacg atcatcattg ccgacgacca tccgctgttc
     1561 cgcggcgcct tgcgccaggc ggtcgggtcg ctgctgccgg gctccaaggt gatcgaagcc
     1621 ggcggcctcg acgagctgac gttgacgctg gagcgggaca aggacgtcga cctcgtcctc
     1681 ctcgacctga cgatgccggg cgtgcagggg ttttccggcc tgctctacct gcgtgcgcag
     1741 tttccacagg tgccggtcgt gatcgtctcg g
//
LOCUS       DATAIQ010001068         1800 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_361919, whole genome shotgun sequence.
ACCESSION   DATAIQ010001068 DATAIQ010000000
VERSION     DATAIQ010001068.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1800)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1800)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1800
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_361919"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1283
                     /locus_tag="VHN20_17570"
     CDS             <1..1283
                     /locus_tag="VHN20_17570"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX2727637.1"
                     /translation="NWISIDKDVDYDKTLAAVARTIDGYPGMQRDVQTYLRERVKEVL
                     TGTSGAIVVRVFGPEPKVLGELADGVVKRISDTPGLVETNAGLQKEIPQINVELDLEK
                     ARQFGLKPGDIRRQTSVYIGSEEVSDIFADGKAFDVHVWSKASARDSFDDVKNLPIDV
                     PGGGKIKLSDVAAVTIGPSPNAILREQQSRLINIEANVAEDADLGAAVDEVEDRIDGF
                     QFPVGYHAEVVGEASELATAQSRLGIFGIGAAIAIFLLLQAAFGSLRLAALAFLLLPI
                     SLVGGVLAVKLFGNGILSLGGLVGFLTVFGIAARNGILMISHFQHLEHVERMPFGPEL
                     VLRGAKERLAPILMTALATGLAIVPLAYAGSIPGHEIEHPMAVVILGGLATSTLLNLF
                     IIPSLYLRFAKPRSEARRAMVEAPVAPAEAPVSA"
     gene            1505..1765
                     /locus_tag="VHN20_17575"
     CDS             1505..1765
                     /locus_tag="VHN20_17575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727638.1"
                     /translation="MTFSVFMFVVGGYAVVLLAAMLVLETTRDPVPQQPRLRHPGEAG
                     RLRAWSRLQRDCPAGHEPTLPLRAARQAAPARRRRSAPRSCR"
BASE COUNT          263 a          641 c          618 g          278 t
ORIGIN      
        1 agaactggat ctcgatcgac aaggacgtcg actacgacaa gacgctggcc gcggtcgcgc
       61 ggaccatcga cggctatccg ggcatgcagc gcgacgtgca gacgtacctg cgcgaacgcg
      121 tcaaggaggt cctgaccggc acgagcggcg cgatcgtcgt gcgcgtgttc ggccccgagc
      181 cgaaggtgct cggcgagctg gccgacggcg tcgtcaagcg catctccgat acgccggggc
      241 tcgtcgagac gaacgccggg ctgcagaagg agatcccgca gatcaacgtc gagctcgacc
      301 tcgagaaggc ccgccagttc ggcctcaagc cgggcgacat ccgccgccag acgtcggtgt
      361 acatcggcag cgaagaggtc tcggacatct tcgccgacgg caaggccttc gacgtgcacg
      421 tgtggtccaa ggcgtcggcg cgcgacagct tcgacgacgt caagaacctg ccgatcgacg
      481 tgcccggcgg cggcaagatc aagctgtcgg acgtcgccgc cgtgacgatc ggccccagcc
      541 cgaacgcgat cctgcgcgag cagcagtcgc ggttgatcaa catcgaagcc aacgtggcag
      601 aggacgccga cctcggcgcg gcggtcgacg aggtcgagga ccgcatcgac ggcttccagt
      661 tcccggtcgg ctatcacgcc gaggtcgtcg gcgaggcgtc ggagctggcg acggcgcaga
      721 gccggctggg gatcttcggc atcggcgcgg cgatcgcgat cttcctgctg ctgcaggcgg
      781 cgttcggcag cctgcgcctg gccgccctcg ccttcctgct cctgccgatc tcgctcgtcg
      841 gcggcgtgct cgccgtcaag ctcttcggca acggcatcct gtcgctcgga gggctcgtcg
      901 gcttcctcac cgtcttcggc atcgcggcgc gcaacgggat cctcatgatc agccacttcc
      961 agcatctcga gcacgtcgaa cgcatgccgt tcgggcccga gctcgtcctg cgcggcgcca
     1021 aggagcgcct cgcgccgatc ctcatgacgg cgctcgcgac cggcctggcg atcgtgccgc
     1081 tggcctacgc gggcagtatc cccggccacg agatcgagca tccgatggcg gtcgtcatcc
     1141 tcggtggcct cgccacctcg acgctgctga acctcttcat catcccctcg ctgtacctgc
     1201 gcttcgccaa gcctcggagc gaggcaaggc gggcgatggt ggaggcgccg gtggcgccgg
     1261 cggaggcgcc ggtctccgcg taagccgcgc ggcatttgct gcgccgtcgc gccgcgctgg
     1321 ttggggtgcc ggccctgctg aaactgcatc gtcgacggcg tcaagggagc gtgggccgcg
     1381 gcgaatcggc cagggccggc cggatcggcg ccgtttcgtc cgcaacagac gggggaatcc
     1441 tcacgctgct ttcagaagcg cccgatacaa ccccctagaa gctgtgtgag gaaggaggaa
     1501 cggcatgacc ttctctgtgt tcatgtttgt ggtcggcggc tacgcggtcg tcctcctcgc
     1561 cgccatgctc gtgctcgaga ccacgcgcga tcccgttccc cagcagcctc gtttgcgcca
     1621 tcccggcgag gccgggcgcc tgcgggcctg gtcgcgcctg cagcgcgact gcccggccgg
     1681 ccacgagccc acgctgccgc tgcgcgcggc gcgtcaggcg gctccggccc ggcgccggcg
     1741 ctccgcgccg cgatcctgcc gctgagccgc gccgtcacga tcccagcggc tggacctggc
//
LOCUS       DATAIQ010001069         2259 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_362058, whole genome shotgun sequence.
ACCESSION   DATAIQ010001069 DATAIQ010000000
VERSION     DATAIQ010001069.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2259)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2259)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2259
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_362058"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..915
                     /locus_tag="VHN20_17580"
     CDS             <1..915
                     /locus_tag="VHN20_17580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020629050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX2727639.1"
                     /translation="PRPLDPNKLIADMADLFHRTLGEAVSVETVFAAGLWRVEADANQ
                     LENAILNLAVNARDAMPGGGKLTIETANTRIDEGYAATHVEVAPGQYVVICVSDTGVG
                     MDKPTLSHVFEPFFTTKEPGKGTGLGLSMVYGFVKQSGGHVKIYSEPGAGTTVKIYLP
                     RLVGDAEDAEPHAASIIPEGSGEETILVVEDDDDVRTYSVEILRELGYRVVEAHDGPS
                     ALRLLERQSRVDLLFSDVILPGGMDGADLARHAVAEQPGLKVLFTTGYARDAIVHHGR
                     LDRGVQLITKPFTYADLAQKVRDVLDAH"
     gene            complement(955..2172)
                     /locus_tag="VHN20_17585"
     CDS             complement(955..2172)
                     /locus_tag="VHN20_17585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX2727640.1"
                     /translation="MPTTLRNVVPTLIALLIGYGLMQMGNTLQGTLLSVRGGLEGFSA
                     AEIGAVGAGFWIGTVIGSLRSGRLIRRVGHIRTFAALGAIASTAALLHLLVVDPLVWV
                     LARGMTGFCFAGLFMVVESWVNGAATPQTRGQILSIYGMTGLLAGVGGQLLLPTADPA
                     QFQPFCIVASIIAFALVPIALTRAAAPREPEDVQISLRRLYRQSPFGVVAAFLCGVST
                     STFFSLAPLWAQRRGFDDQAIALFMASGTLGGFLMTWPLGWLSDRIDRRAVIIGAAIT
                     AATMLLALVATVPRDAPPWVIYLCVAVFGGTIIPTYSIVIAHVNDTVTPREFVAAAGG
                     LLIVQGAGATLGPLIGGLAMSLLARGLSITIITAQLLIALWGAYRFARRPLTRGAARA
                     DFVVEPPVPVHAR"
BASE COUNT          390 a          771 c          781 g          317 t
ORIGIN      
        1 ccgcgcccgc tcgatccgaa caagctgatc gccgacatgg ccgacctgtt ccaccgcacg
       61 ctcggcgagg cggtgtccgt cgagaccgtg ttcgccgccg gcctgtggcg cgtcgaggcc
      121 gacgccaacc agctcgagaa cgcgatcctg aaccttgccg tgaacgcgcg cgacgcgatg
      181 cccggcggcg gcaagctgac catcgagacg gccaataccc gcatcgacga gggctacgcg
      241 gcaacgcatg tcgaggtcgc gcccggccaa tacgtcgtca tctgcgtgtc cgacaccggc
      301 gtcggcatgg acaagccgac gctgtcgcac gtgttcgagc cgttcttcac gaccaaggag
      361 ccgggcaagg gcaccggcct gggcctcagc atggtctacg gcttcgtcaa gcagtcgggc
      421 gggcacgtga aaatctactc cgagcccggc gccggcacga cggtcaagat ctacctgccg
      481 cgcctggtgg gagacgccga ggacgccgag ccgcacgcgg cgagcatcat ccccgagggg
      541 agcggcgagg agacgattct cgtcgtcgag gatgatgacg acgtgcgcac atactcggtg
      601 gagatcctgc gcgagctcgg ctatcgcgtc gtcgaggcgc atgacggccc atcggcgctg
      661 cggctcctgg agcgccagag ccgcgtcgac ctcctgttca gtgatgtcat tctgcccggc
      721 ggcatggacg gcgccgacct ggcgcgccac gcggtggccg agcagccggg gctcaaggtc
      781 ttgttcacga ccggatacgc ccgcgacgcg atcgtgcacc acggccgcct cgaccgcggc
      841 gtgcagctga tcaccaagcc gttcacctat gccgatctcg cccagaaggt gcgcgacgtc
      901 ctcgacgcgc actgagggcg acagctctcg cgatcatcga tcgtcaaatc ggcgtcatcg
      961 cgcgtgcacc ggcaccggcg gctcgaccac gaagtccgcg cgtgccgcgc cccgcgtcag
     1021 cggcctgcgc gcgaagcggt aggctcccca caacgcgatc agcagctgcg cggtgatgat
     1081 cgtgatcgac aggccgcgcg cgaggagcga catcgccagt cccccgatga gcgggccgag
     1141 cgtggcgcca gcgccctgca cgatcaggag cccgccggcg gcggccacga actcgcgcgg
     1201 cgtcacggtg tcgttcacgt gggcgatgac gatgctgtag gtcgggatga tggtcccgcc
     1261 gaacacggcg acgcacagat agatgaccca cggcggcgca tcgcgcggca ccgtggcgac
     1321 aagcgccagc agcatggttg cggcggtgat ggcggcgccg atgatgaccg cgcgcctgtc
     1381 gatccggtcg gagagccagc cgagcggcca cgtcatgagg aagccgccga gcgttccgct
     1441 cgccatgaac agcgcgatcg cctgatcgtc gaagccgcgg cgttgcgccc acagcggcgc
     1501 caggctgaag aacgtggacg tgctcacgcc gcacaggaac gcggcgacga cgccgaacgg
     1561 cgactgccgg tagagccggc gcaagctgat ctgcacgtct tccggttccc tgggcgcggc
     1621 ggcgcgcgtc agcgcgatcg gcaccagcgc gaaggcgatg atgctcgcga cgatgcagaa
     1681 tggctggaac tgggccggat cggcggtcgg caggagcagc tgcccgccga cgcccgccag
     1741 caggccggtc atgccgtaga tgctgagaat ctggccgcgg gtctgcgggg ttgctgcgcc
     1801 gttgacccag ctttcgacca ccatgaacag cccggcgaag cagaagccgg tcatgccacg
     1861 cgccagcacc cagaccaagg gatcgaccac gagcaggtgg agcagggccg ccgtcgaggc
     1921 gatcgcgccg agggccgcga aggtgcggat gtggccgacc cgccggatta accggccgct
     1981 gcgcagcgag ccgatgacag tgccgatcca gaatccggcg ccgactgcgc cgatctcggc
     2041 cgcactgaaa ccctcaaggc cgccgcgcac gctgagcagc gtgccttgca gcgtgttgcc
     2101 catctgcatg aggccgtagc cgatgagcag cgcgatcagc gtcgggacaa cgttgcgcaa
     2161 cgttgtgggc attggcaccc ccgttttttc cctgttcgtt ggattgcttg tgagcggatc
     2221 agcagccggg ctcttgaagt gctacctgca ggaatcttc
//
LOCUS       DATAIQ010001070         1710 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_224499, whole genome shotgun sequence.
ACCESSION   DATAIQ010001070 DATAIQ010000000
VERSION     DATAIQ010001070.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1710)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1710)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1710
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_224499"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            129..1565
                     /gene="ffh"
                     /locus_tag="VHN20_17590"
     CDS             129..1565
                     /gene="ffh"
                     /locus_tag="VHN20_17590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017978249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0048501 - signal recognition particle,
                     plasma membrane targeting [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005048 - signal sequence binding
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HEX2727641.1"
                     /translation="MFESLSDRLSGVFDKLRGRGALSEDDVRSAMREVRVALLEADVA
                     LPVARDFVDQVTTRAVGAEVIRSVTPGQMVVKIVHDALVEMLGTDNAGLNLDINPPAV
                     VMMVGLQGSGKTTTTAKLGKRLAERERKKVLMASLDVARPAAQEQLAVLGRQAGVETL
                     PIVPGQSPVEIARRALQSARLQAYDVLLLDTAGRLHVDDALMAEMKAVAAASNPVETL
                     LVVDSLTGQDAVNVAKGFAGEVELSGVILTRMDGDARGGAALSMRAVTGKPIKFAGTG
                     EAMDKLEAFHPDRVAGRILGMGDVVSLVERAAETVKIEDAEKLAAKMEKGKFDLDDLA
                     MQIQQMKRMGGIGALANMLPGMKQMKGAANVDDKALVHLEAMMSSMTAKERSKPELIN
                     AKRKIRIAKGSGTTVQEVNKLLKMHKDMATAMKKLRKMGGFSKLAAMFSGGGMEKMLG
                     QVGPGGLPGGPGLPGLGGPGLPPNFRKN"
     gene            1599..>1710
                     /gene="rpsP"
                     /locus_tag="VHN20_17595"
     CDS             1599..>1710
                     /gene="rpsP"
                     /locus_tag="VHN20_17595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007693780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HEX2727642.1"
                     /translation="MAVAIRLARGGSKKRPYYRIVVADSRNSRDGRFLEKI"
BASE COUNT          306 a          554 c          600 g          250 t
ORIGIN      
        1 tgcgcttcgg ctagggccgc caccgtcttc acggacagac atcgctaatg cccctcgggg
       61 cgcgctggcc ggcgaggttt cgcccgccgg cgtttcgttc gttgcggtgt ccgagcgaag
      121 ggaagtcgat gttcgaaagc ctgagcgatc gcctgagcgg cgtgttcgac aagctccgcg
      181 gtcgcggcgc cttgtcggag gacgacgtgc gctcggcgat gcgcgaggtg cgggtggcgc
      241 tgctcgaggc cgatgtcgcg ctgccggtgg cgcgcgactt cgtcgaccag gtcacgacac
      301 gcgccgtcgg cgccgaggtc atccgctcgg tcacgccggg ccagatggtc gtcaagatcg
      361 tccatgacgc gctcgtcgag atgctcggca ccgacaatgc cgggctgaac ctcgacatta
      421 atccgccggc ggtggtgatg atggtcggcc tccagggctc gggcaagacg accaccaccg
      481 ccaagctcgg caagcgcctg gcggagcggg agcgcaagaa ggtgctgatg gcgtcgctcg
      541 acgttgcccg cccggcggcg caggagcagc tcgccgtgct cggccgccaa gccggggtcg
      601 aaacgctgcc gatcgtgccc ggccagtcgc cggtcgagat cgcccggcgc gcgctgcagt
      661 cggccaggct gcaggcctac gacgtgctcc tgctcgacac cgccgggcgt ctccacgtcg
      721 acgatgcgct gatggccgag atgaaggcgg tcgcggccgc ctccaacccg gtcgagaccc
      781 tgctggtcgt cgacagcctg accggccagg acgcggtcaa cgtcgccaag ggcttcgccg
      841 gcgaggtcga gctgtcgggc gtcatcctca cccgaatgga cggcgacgcg cgcgggggcg
      901 cggccctgtc gatgcgcgcc gtcaccggca agccgatcaa gttcgccggc accggcgagg
      961 cgatggacaa gctcgaggcg ttccaccccg accgcgtcgc cggccgaatc ctcggcatgg
     1021 gcgatgtcgt cagcctggtc gagcgtgccg ccgagacggt caagatcgag gacgcggaaa
     1081 agctcgcggc gaagatggag aagggcaagt tcgacctcga cgacctcgcc atgcagatcc
     1141 agcagatgaa gcgcatgggc ggcatcggcg cgctggccaa catgctgccc ggaatgaagc
     1201 agatgaaggg cgcggccaac gtcgacgata aggcgttggt ccacctggag gcgatgatga
     1261 gctcgatgac cgccaaggag cgttcgaagc cggagctgat caacgccaag cgcaagatcc
     1321 gcatcgccaa gggcagcggc accaccgtcc aggaggtcaa caagctcttg aagatgcaca
     1381 aggacatggc gaccgcgatg aagaagctgc gcaagatggg cggcttctcc aagctcgcgg
     1441 caatgttctc gggcgggggc atggaaaaga tgctcggcca ggtcggaccc ggcgggcttc
     1501 cgggcggccc cggcctgccc gggctgggcg gccccggcct tccacccaat tttcgcaaga
     1561 attgactcta acgaactgat ttcacgaaag gaaagacaat ggcagttgca attcgcctgg
     1621 cccgcggggg cagcaagaag cgtccctatt acaggatcgt cgtcgccgac agccgcaatt
     1681 cgcgcgatgg ccgcttcctc gagaagatcg
//
LOCUS       DATAIQ010001071         2230 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_268932, whole genome shotgun sequence.
ACCESSION   DATAIQ010001071 DATAIQ010000000
VERSION     DATAIQ010001071.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2230)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2230)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2230
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_268932"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            484..1266
                     /gene="folP"
                     /locus_tag="VHN20_17600"
     CDS             484..1266
                     /gene="folP"
                     /locus_tag="VHN20_17600"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: protein motif:HMM:TIGR01496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004156 - dihydropteroate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HEX2727643.1"
                     /translation="MGILNVTPDSFSDGGRYLDPDHAYARALELEAAGADLIDVGAES
                     TRPGAERITEEQELHRLIPVLKRLKEKLQIPICVDTYKALVAERAIEQGAEAINDPSG
                     LTFEPGLAKVVVQADAGLILNHMRGTPESWAKLPSLKDPMGSVRSELEATVHRAIRGG
                     VQRERLVIDPGLGFGKRKEQNSALLARLPELGALHLPLMAAPSRKTFLARATPAETEF
                     ATAAAVTAAILAGAHIVRVHDVAAMKPVVETADAIVTAGRRE"
     gene            1277..>2230
                     /locus_tag="VHN20_17605"
     CDS             1277..>2230
                     /locus_tag="VHN20_17605"
                     /inference="COORDINATES: protein motif:HMM:NF014045.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HEX2727644.1"
                     /translation="MAANGGTGSSLSRDNFRNATILVDFENVFYWLKNNRPGHEAVTE
                     AIARVIRGLRQHLLTEYQEQTISMDAYADFDRIGENALSELYLLGIDTHNVLGTDHKN
                     AADMRLCIDAVDIFHVRRDISTFVFLAGDRDYLPVIQYLRKRGRTVRVVGWPRSVSGD
                     LVTIVGREYFIDATMFLPAAPGEIRGARQGGPAARAHALRAESAGVHPPPGPAVPPRL
                     QEAPAPGAAPVAPAFREEPEDEHEDGHYEELALDIIFKHFAGKPEIWLTPYLHKLRAE
                     MPELTEPERKRIISRLQEEEVFRVEKRSGTPNDYSVIMLNWN"
BASE COUNT          392 a          662 c          865 g          311 t
ORIGIN      
        1 ggcgagtggc cgcagaaggg ccggggacag gaccagcgcg gcggcagcgg gtcggaccgt
       61 ccgcgtccat acgggcgcga ggggcgcgag gcgcgcgagg cgcgcgaggg gcgggacacg
      121 cgcgggccac gcgatccgcg gggcgaaggc ccaccgcgcc gcgactcccg gcgcgatggc
      181 ggcgatgcgc tagacgaaaa gcggccgggg gcgttcgacc gggatgctcc gggcgaccgg
      241 ccggtgcgca gaatcgagcg ctcggaggag gcgcctcgga gcgacgacgc accggcggtc
      301 gaggcgaagc ggacggtaaa gccgacattt ccgcgtcccg aggaggtgcc ggcgggtccg
      361 cgggcacggt cgggcgggca ggcagcggcg gctccggcgc agggggctcc ctggctggtg
      421 cggaagcggt acgtgtggaa gctgcgcggg cgcgatctgc aactcggcga gcgcacgctg
      481 atcatgggca tcctgaacgt gacgcccgat tcgttcagcg acggcggccg ttatctcgac
      541 ccggaccatg cttatgcgcg ggctctcgag ctggaagcgg cgggcgcgga cctgatcgac
      601 gtcggggccg agtcgactcg tccgggcgcg gagcgcatca ccgaggagca ggagctgcac
      661 cggctgattc cggtgctgaa gcggctgaag gagaagctgc agattccgat ctgcgtcgat
      721 acgtacaagg cgctggtggc ggagcgggcg atcgagcagg gagctgaagc aatcaacgat
      781 ccgtcagggc tgacgttcga gccggggctg gcgaaggtgg tggtgcaggc cgatgcgggg
      841 ctgatcctga atcacatgcg gggcacgccg gagagctggg cgaagctgcc gtcgctcaaa
      901 gatccgatgg gcagcgtgcg ctcggagtta gaagcgacgg tgcatcgagc gattcgcggc
      961 ggagtacaac gcgagcggct ggtgatcgac ccgggtctcg gcttcgggaa gcggaaggag
     1021 cagaactcgg cgctgctggc gcggctccct gagctcggag cgctgcatct gccgctgatg
     1081 gcagcgccgt cgcgcaagac gttcctggcg cgggcaacgc ctgccgagac ggagtttgct
     1141 accgcggcgg cggtgacggc cgcgatcctg gcgggagcgc acatcgtgcg cgtacacgac
     1201 gtggcggcga tgaagccggt ggtggaaacg gcggacgcga tcgtgacggc cggacggcgg
     1261 gagtaggcgg gcggccttgg cggcgaacgg cggaaccggg tcctcgctct cacgcgataa
     1321 ttttcgcaac gcgaccatcc tggtcgattt cgagaacgtc ttttactggc tgaaaaacaa
     1381 ccggccgggg catgaggcgg tgaccgaggc gatcgcgcgg gtgattcgcg gcctgcgcca
     1441 gcacctgctg accgagtatc aggaacagac gatcagcatg gacgcgtacg ccgatttcga
     1501 ccggatcggt gagaacgcgc tgagcgaact gtacctgctc ggcatcgaca cccacaacgt
     1561 gctcggaacc gatcacaaaa atgccgccga catgcggctg tgcatcgacg cggtcgatat
     1621 tttccacgtg cggcgggaca tcagcacctt tgtgttcctg gcgggcgacc gcgactatct
     1681 tccggtgatt cagtatctgc ggaagcgggg acggaccgtg cgcgtggtgg ggtggccgcg
     1741 gagcgtgtcg ggcgacctgg tgacgatcgt ggggcgggaa tacttcatcg acgccacgat
     1801 gttcctgccg gcggctccgg gggagatccg aggcgcgagg cagggaggtc cggcagcgcg
     1861 ggcgcatgct ttgcgggcgg agagcgcggg ggtgcatccc ccaccgggtc cggcggttcc
     1921 gccgcggctg caggaggctc ccgcgccggg agccgctccc gtcgccccgg ccttccggga
     1981 agagcccgaa gatgaacacg aggacggcca ttacgaagaa ctggcgctgg acatcatctt
     2041 caagcacttc gcgggcaagc cggagatatg gctcacgccc tatctacaca agctgcgggc
     2101 ggagatgccc gagctgaccg agccggagcg gaagcggatc atcagcaggc tgcaggaaga
     2161 ggaagtgttc cgggtcgaga agcgctcagg gactccgaac gactactccg tcatcatgct
     2221 gaactggaac
//
LOCUS       DATAIQ010001072         4819 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_362215, whole genome shotgun sequence.
ACCESSION   DATAIQ010001072 DATAIQ010000000
VERSION     DATAIQ010001072.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4819)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4819)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4819
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_362215"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..755)
                     /locus_tag="VHN20_17610"
     CDS             complement(<1..755)
                     /locus_tag="VHN20_17610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020091590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HEX2727645.1"
                     /translation="MKHRFSGAAAAAAFLWCSPGVAGGFAVVGTGDGMDMLQAASVLF
                     SSERPDAPVSVPPSVGSGGAVAAVGADRNVLGRVARPLKDAEKAQGLETTPIVRISSA
                     FFVHPSARVRAVTTKQLTDIYSGKIDNWKQVGGADLKIKVVRREEADSTLGELRATMP
                     GWKDLDITSRSKMAMTTQEAIESVRDVEGAIGFGPYSTSLEQGTTVLTVDGRHPTSPR
                     YYSAVTLALLHKASTLTPEAKSFIAFTRSAKAQ"
     gene            complement(1137..1523)
                     /locus_tag="VHN20_17615"
     CDS             complement(1137..1523)
                     /locus_tag="VHN20_17615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015316980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1232 domain-containing protein"
                     /protein_id="HEX2727646.1"
                     /translation="MSLVASLKTWARAVKLDVTALWIAARDRRTPWYAKAAAAAVAAY
                     ALSPIDLIPDFVPVLGYLDDLIIVPLGILLAVRLIPDQLMREFRQEAVLRQRLPGSYV
                     GAIIIAAIWIGSVLALAWLFWPRGTA"
     gene            complement(1602..2630)
                     /locus_tag="VHN20_17620"
     CDS             complement(1602..2630)
                     /locus_tag="VHN20_17620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HEX2727647.1"
                     /translation="MKDLPTLLINGRKIKASPGDTLLDAGLSNRVVIPHDCCTGQCST
                     CRVRVYDGEVDDEGTREGDTVLACQATVSGDAVIEFDEVPFAAKRSGTVTAIERISPD
                     IVEVAVTLSKPLTHLPGQYVKVSFAGFPARDYSPTFRVDGTCELNELIFHIRGCADGV
                     VSSQLGRGIGVGHRVRVRGPFGNAFFRKAEGRIVLVATGTGWAPIWSVARAARYHQPQ
                     REMVVVVGARDPRNLYMQPSLEWLSETGVQQITMTCTGSRPERSPIRSGRPTVHLPRL
                     QDTDTVFVAGAPEMVSAVEFLAGVAGATCHADPFLPATRRKRLGSLIAAWARQHTSAR
                     LAASPPQQ"
     gene            complement(2660..4441)
                     /locus_tag="VHN20_17625"
     CDS             complement(2660..4441)
                     /locus_tag="VHN20_17625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020091592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ethylbenzene dehydrogenase-related protein"
                     /protein_id="HEX2727648.1"
                     /translation="MLAVLGTAIGLRRDGAPAADGAADRSNPRARSAAARRSDAPRSD
                     IGTVLLHWVVAAAMVASLVTGLRISADAPTAVISSFLSPILPQGEIWTVHFVSSLALV
                     FTTTAYILYMARGGLKRRVSLKKLRVFTLPTAPKVRWGAANVALYWAFYLVLLTLTAT
                     GIALYLGFGGWVVAVHAVCAFVTIGYVVAHLIVHFGYGGWQQILRIFRPTRLVPNKAT
                     RTRPLLVATAVAVPAAIGLASYDIATRDVLAVAHADRAPRLDGVLDDEAWKAARPVFV
                     RTMQGENLGGSGESTVEMRAVTSGSKVYFAFRWQDPTRSMMRLPLQKRADGWHLAGSR
                     ADIADVMDFYEDKLAILFAHNTEFGNGGSTHMGPRPLGDKPEPLHRRGYHYTTDGSIL
                     DVWQWKASRGGMLGYVDDMFFGPPFEPKPAEAAGTTRYQAGYTNDPGSAFYVYNYKPE
                     PPGGYKGPVQLLRLPKDLGATTAAMGRIDLSPDATADDGSRWWMLEGETIPYSQEADA
                     AIPVGTVIPGVLIMGEYAGDRADVRGAAVWKDGYWTLETSRELSTGSKYDVDFTVKKP
                     LYAWLAVFDHNQTRHTRHMRPVRIEMR"
BASE COUNT          813 a         1604 c         1654 g          748 t
ORIGIN      
        1 ttctgcgcct tggccgagcg cgtgaaggcg atgaagctct ttgcctcggg ggtcagcgtc
       61 gatgccttgt gcagcagcgc cagcgtgacg gcgctgtagt agcgcgggct ggtcggatgg
      121 cggccatcga cggtaaggac cgtcgtgcct tgctcgagtg atgtcgaata cggcccgaac
      181 ccgatggcgc cttccacgtc cctgacgctc tcgatggcct cctgcgtcgt catggccatc
      241 ttggaccgcg acgtgatgtc gagatccttc cagcccggca tcgtcgcgcg cagctcgccg
      301 agggtgctgt cggcttcctc gcggcgcacg accttgatct tcaggtcagc gccgccgacc
      361 tgcttccagt tgtcgatctt gccggaatag atatccgtca gctgcttggt cgtgacggcg
      421 cgcacgcgcg cgctcggatg aacgaagaag gccgacgaaa tgcgcacgat cggcgtcgtc
      481 tcgagccctt gcgccttctc ggcgtccttg agcggccggg caacgcgacc gagcacgttg
      541 cggtcggcgc cgacggcggc cacggcgccg cccgagccga cgctcggcgg cacggaaacc
      601 ggggcgtcgg gccgctcgct cgagaacagc acgctggcag cctggagcat gtccatgccg
      661 tcgccggtcc cgacgacggc gaacccgccg gcgacacccg gcgagcacca cagaaaggcg
      721 gccgcagcgg cggcccccga aaaccgatgt ttcatcccgc aactccgcag caaaggcccg
      781 caaggccgac ggctcggacg agcaggatgc acgagaccgg ctaagatttt gataaggctc
      841 ttttcgctcg gcggtcgcga ccccggccga ggctcgagcg tgatcggttc ggattggatc
      901 gatcacgctc tatttcttat tgagccgcat gatcccggat caagtccggg acaagccttt
      961 ttcggcgaag cggtgtccac ttcgccggat catgcaccta aggagcggga tcgcttcaga
     1021 tcggaccgat cctgctgccg ggctgcagag ccgaaattcg acccttcgag gatcgagcga
     1081 ggcccgtcat ggtgtcgttg acggcaatgg ctggaagcgc aagccgatgg gtgagcctac
     1141 gcggtgcccc tgggccagaa caaccaggcc agcgccagca cagagccgat ccagatcgcc
     1201 gcaatgatga tcgcgccgac gtagctcccg ggaagccttt ggcggaggac cgcctcctgc
     1261 ctgaactcgc gcatcagctg gtctggaatg agccgcacgg caagcaggat gccgagcggc
     1321 acaatgatca ggtcgtccag atatccaagc accgggacga aatcggggat gagatcgatc
     1381 gggctcagcg cataggccgc aactgccgct gccgcggcct tcgcgtacca cggggtgcgc
     1441 cgatcgcgtg ccgcgatcca gagtgccgtc acatcgagct tgacggcgcg cgcccaggtc
     1501 ttgagggatg caacaaggct caccgcggct ccgttgtcag ccgggcggac ggttacgccg
     1561 cccgtcctga acgcaagatg actgcgtcgt gcagccgcgt tctactgttg cggaggggaa
     1621 gctgccagcc tggcggaggt gtgctgccgc gcccatgccg cgatcaggct gcccaggcgc
     1681 ttacgtcgtg tcgccgggag gaacgggtcg gcatggcagg tcgcgcccgc cacgccggcc
     1741 aggaactcga ccgccgacac catttcgggc gcgcccgcca cgaagaccgt gtcggtatcc
     1801 tgcaggcgcg gcagatgaac cgtgggccgc ccggagcgga tcggggagcg ctccggccgg
     1861 ctgccggtgc aggtcatcgt gatctgctgc acgcccgtct cgctcagcca ctcgagggag
     1921 ggctgcatgt aaaggttgcg cggatcgcgc gcgccgacaa cgaccaccat ctcgcgctgc
     1981 ggctggtgat agcgggcggc gcgggccacc gaccagatcg gcgcccagcc ggtgccggtg
     2041 gcgaccagca cgatgcggcc ttccgccttg cggaagaagg cgttgccgaa ggggccgcgc
     2101 acgcgaacgc ggtgcccgac cccgatgccg cgtcccagtt gcgacgacac cacgccgtcc
     2161 gcacagccgc ggatgtggaa gatcagttcg ttcagctcgc aggttccgtc gacgcggaag
     2221 gtcgggctgt agtcgcgggc ggggaacccg gcgaaggaga ccttgacgta ttgccccggc
     2281 aggtgcgtca gaggcttcga gagggtcacc gccacctcga cgatatccgg cgagatgcgc
     2341 tcgatcgccg tgaccgtgcc ggagcgcttg gccgcaaacg gcacctcgtc gaattcgatc
     2401 accgcgtcgc cgctgaccgt cgcctggcac gccaggacgg tgtcgccctc gcgcgtgcct
     2461 tcgtcgtcga cctcgccgtc gtaaacgcgc acgcggcacg tcgagcactg gcccgtgcag
     2521 caatcgtgcg ggatgacgac gcggttgctg aggccggcgt cgagcagcgt atcgcccgga
     2581 ctcgccttga tcttgcggcc gttgatcaag agggtgggaa ggtccttcac aaagctctcc
     2641 gtcaaaagca gcggccgggt cagcgcatct cgatgcgaac cggccgcatg tggcgggtgt
     2701 ggcgggtctg gttgtggtcg aacaccgcga gccaggcata cagcggcttc ttcacggtga
     2761 agtcgacgtc gtatttgctg ccggtgctca actcgcgaga ggtctcgagc gtccagtagc
     2821 cgtccttcca gacggcggcg ccgcgcacgt cggcccggtc gcccgcatac tcgcccatga
     2881 tcagcacgcc tgggatcacg gtgccgaccg ggatcgccgc gtcggcttcc tgcgaatagg
     2941 gaatggtttc gccttcgagc atccaccagc gcgagccatc gtcggcggtc gcgtccgggc
     3001 tcaggtcgat cctgcccatc gccgccgtcg tggcgccgag gtccttcggc aggcgcagca
     3061 gctggacggg gcctttgtag ccgccgggag gctcgggctt gtagttgtag acgtagaagg
     3121 cgctgcccgg gtcgttggtg tagccggcct gatagcgcgt cgtacccgcc gcctccgccg
     3181 gcttcggctc gaaaggcggc ccgaagaaca tgtcgtcgac atagccgagc atgccgccgc
     3241 gcgaggcctt ccactgccac acgtcgagaa tgctgccgtc cgtggtgtag tgatagccgc
     3301 gccggtgcag gggctccggc ttatccccaa gcggccgggg ccccatatgg gtcgagccgc
     3361 cattgccgaa ctcggtgttg tgcgcgaaca ggatggcgag cttgtcctcg taaaagtcca
     3421 tcacgtcggc gatgtcggct cggctgccgg cgaggtgcca gccgtcggcg cgcttctgca
     3481 gcggcaggcg catcatcgag cgggtcgggt cctgccagcg gaaggcgaaa tagaccttgc
     3541 tgccactcgt cacggcgcgc atctcgactg tcgactcgcc cgagccgccg aggttctctc
     3601 cctgcatcgt gcgcacgaag accggacggg cggccttcca cgcctcgtcg tcgagaaccc
     3661 cgtcgaggcg cggcgcgcgg tcggcatgcg cgacggcgag cacgtccctc gtggcgatgt
     3721 cgtaggaggc cagcccgatc gccgccggaa cggcgaccgc cgtcgccacg agcaatggcc
     3781 gcgtgcgcgt cgccttgttg gggacgaggc gggtgggccg gaagatgcgc aggatctgct
     3841 gccatccgcc atagccgaaa tgcacgatca ggtgggcgac gacatagccg atggtgacga
     3901 aggcgcacac ggcgtgcacc gcaacgaccc agccgccaaa tcccaagtag agcgcgatcc
     3961 cggtcgcggt cagcgtgagc aggacaaggt aaaaggccca atagagcgcc acgttggcgg
     4021 cgccccagcg caccttcggc gccgtcggga gggtgaaaac gcgcagcttc ttgagggaca
     4081 cgcggcgctt cagcccgccc cgcgccatgt agaggatata ggccgtcgtc gtgaagacca
     4141 gcgccaggct ggatacgaaa tggaccgtcc agatctcacc ttgcggcagg atcggcgaga
     4201 gaaaactgga gatcaccgcg gtcggggcat cggccgagat gcgcagcccc gtgaccaggc
     4261 tcgccaccat ggccgcggcg accacccagt gcagcaggac ggtgccgata tcgctgcgcg
     4321 gcgcatcgct ccgtcttgcc gcggcagagc gggcgcgagg gttcgaccgg tcggcggcgc
     4381 cgtcggccgc gggcgcccca tcgcgtcgca agccgatcgc cgtgccgagg acggcaagca
     4441 tggtggcgcc aagaagtccc gcggtccagg gagagccttg ggaaaaaaca gctagggagc
     4501 ctgtgacgac gtcaaggggc gccgccgccg ccgacgggct cgcgctcgct gccgcgccag
     4561 ccggcagcaa agagatgacc gcggcgcgcc gcatcgcccg gcgcgcggaa acgttaatac
     4621 gcattcgcta cgacccccaa gccggcagac cagccgtggc tctggttggg cggattggct
     4681 ccgcttctgc aacttccagc ttaattcctc cgacgcgaaa gggaagcccc agttgcggcc
     4741 attcttaacc ggggcaatgg acgtcatttg ccaaacaatg gacaggcgcc gcggcggacg
     4801 cccgtcatac aaccctggc
//
LOCUS       DATAIQ010001073         5426 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_362223, whole genome shotgun sequence.
ACCESSION   DATAIQ010001073 DATAIQ010000000
VERSION     DATAIQ010001073.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 5426)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5426)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5426
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_362223"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..127)
                     /locus_tag="VHN20_17630"
     CDS             complement(<1..127)
                     /locus_tag="VHN20_17630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012255746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2497 domain-containing protein"
                     /protein_id="HEX2727649.1"
                     /translation="MSAASPKAQEPSMEEILASIRRIIADDQEGPKAAQPAPPPAP"
     gene            complement(256..1608)
                     /locus_tag="VHN20_17635"
     CDS             complement(256..1608)
                     /locus_tag="VHN20_17635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009492642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family outer membrane protein"
                     /protein_id="HEX2727650.1"
                     /translation="MASLLLLFSASAAPAETLDSALARAYRGNPTLGAQRASVRATDE
                     NLPRALSGYRPTVSATADAGAQWTEGRAGRTNSREFGEPTYPRGVGVQVNQTLFNGLR
                     TFNVTRQAESQVLGARETLRNTEQTVLFNGATAYMNVLRDTAILSLQRNNVEVIEEQL
                     RQTRDRFNVGEVTRTDVAQAESRLAASRSQVSLAEANLRTSIAVFRQVVGVEPRQLAP
                     GQPLDRLLPRSVDAAIDIGLMEHPAIVAALHAVDVAELQVKVTEGELMPTLGVTGSAQ
                     QRWDVQDLGDNRLVASAVARLTVPIYEGGEVYARVRQAKETAGQRRIEADVTRDQVRA
                     QVVSTWGQLEASRAQITAAQAQVQAAEVALNGVREEARVGQRTTLDVLNAQQELLTAR
                     VNLITAQRDRVVNSYAVVQAIGRLSTRALALRIEQYSAKEHFDQVKGLWGGVRTPDGR
                     "
     gene            complement(1822..2490)
                     /locus_tag="VHN20_17640"
     CDS             complement(1822..2490)
                     /locus_tag="VHN20_17640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015824735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate O-methyltransferase"
                     /protein_id="HEX2727651.1"
                     /translation="MLDFAKARRLMVDTQLRTFDVNDLALLAAFDEVPRERFVPVGRE
                     DLAYIDQPIPVTEGVESERRFMLAPAVLARMIQSLTVAHGARVLDVACGLGYSSAILA
                     RLGASVVALESSERIADEARRRLAASRAEGVVTAVGPLERGYREAAPYDAILVNGAAD
                     VRPQGLLDQLGDGGRLVCVEGRGRSASVTLYVRAGQAFGARPLFDAAAPLLPGFQAEP
                     GFVF"
     gene            complement(2737..2810)
                     /locus_tag="VHN20_17645"
     tRNA            complement(2737..2810)
                     /locus_tag="VHN20_17645"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2776..2778),aa:Cys,seq:gca)
     gene            2996..3070
                     /locus_tag="VHN20_17650"
     tRNA            2996..3070
                     /locus_tag="VHN20_17650"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3028..3030,aa:Asn,seq:gtt)
     gene            complement(3138..3359)
                     /locus_tag="VHN20_17655"
     CDS             complement(3138..3359)
                     /locus_tag="VHN20_17655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727652.1"
                     /translation="MAVAEAQLENRPRAIDSAPREPTQILLLYCPKQGGWQTGEWYPE
                     KSRWVSNMNMETLHPTHWAEVPREPGMPA"
     gene            4041..4754
                     /locus_tag="VHN20_17660"
     CDS             4041..4754
                     /locus_tag="VHN20_17660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanyl-tRNA editing protein"
                     /protein_id="HEX2727653.1"
                     /translation="MVQTALLFRDDAYAQTCDATVLEVTPQGIILDRTVFYAQGGGQP
                     GDVGTLRNRDGTGMAIANTVYGPDRASIMHVPAAGAAPLNPGDPVTAHLDWTRRYLRM
                     RVHTALHLLSVVLPYPVTGGAIGDGDGRLDFDIPEGGLDKGALTDKLNALIARDDLVR
                     ERWITDDELDANPSLVKTMAVKPPRGSGRIRLIEIGDIDLQPCGGTHVRRTGEIGPVL
                     VTDVEKKGKQNRRVRIGLA"
     gene            4860..>5426
                     /locus_tag="VHN20_17665"
     CDS             4860..>5426
                     /locus_tag="VHN20_17665"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015932744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase"
                     /protein_id="HEX2727654.1"
                     /translation="MPPPPFVSTEWLNQRLDAPDIVVIDGSWYLPAMNRDPDAEYLAG
                     HIPGAVRFDIDTIKDPSSSLPHMLPSPEAFASAMRAMGIGDGMSIVVYDGAGLFSAPR
                     VWWTLRTFGARDVMILEGGFPAWKVEGRPVEEGPGRPRARRHFTARLDHSAVADAAAV
                     RIALDRGTAQVVDSRPADRFRGDAPDIVV"
BASE COUNT          883 a         1852 c         1826 g          865 t
ORIGIN      
        1 gcggcgccgg agggggggcg ggctgagccg ccttgggacc ctcctgatcg tcggcaatga
       61 tccgccggat ggaggcgaga atctcctcca tcgacggctc ttgcgctttg ggactcgctg
      121 cactcatgtg cttggcaacc gcctcgacct atagataagt aagaatcaca gccaatcagc
      181 actattctca cgcggactca aagaggcaag ctgacgcgac tggcgctcac aggaaatgcg
      241 atcaggaagt gagagttagc gcccgtcagg tgtacgaacg ccgccccaga gccccttgac
      301 ctgatcgaaa tgttccttgg cgctgtactg ctcgatcctg agcgcgaggg cccgggtcga
      361 gagccggccg atggcctgaa ccaccgcata tgagttcacg acgcggtcac gctgcgccgt
      421 gatcaggttg acgcgcgccg tcaacagctc ctgctgcgca ttgaggacgt cgagggtcgt
      481 gcgctggccg acgcgagcct cctcgcgcac gccgttgagc gcaacctcgg ccgcctgaac
      541 ctgagcctgc gcggcggtga tctgggcccg cgacgcctcg agctgccccc aggtcgagac
      601 cacctgggcg cggacctgat cgcgcgtcac atcggcctcg attcgcctct gcccggccgt
      661 ttccttggcc tggcgcacgc gcgcgtagac ttccccgccc tcgtagatcg gcacagtcaa
      721 gcgggccacc gcggaggcaa caaggcggtt gtcgccgaga tcctgcacgt cccagcgctg
      781 ctgggcgctg ccggtcacgc ccagggtcgg catcagttcg ccttcggtga ctttcacctg
      841 gagctcggcc acgtcgaccg cgtgcagggc cgccacgatc gccggatgct ccatcagccc
      901 gatatcgatg gcggcgtcga cagagcgcgg cagcaggcga tcgaggggct ggccgggcgc
      961 gagctggcgc ggctcgaccc caaccacctg gcggaacacg gcgatgctgg tgcgcagatt
     1021 ggcctcggca aggctcacct gcgaacggga cgcggcgagc cgcgattcgg cctgggcgac
     1081 gtcggtacgc gtcacctcgc cgacattgaa gcggtcccga gtctggcgaa gctgctcctc
     1141 gatgacctcg acgttgttgc gctgaaggct gaggatggcc gtgtcgcgca gcacgttcat
     1201 gtaggcggtg gcgccgttga acagcaccgt ctgctcggtg ttgcgcaacg tctcgcgcgc
     1261 gccgagcacc tgcgattcgg cctgacgggt gacgttgaag gtacgcaggc cgttgaagag
     1321 cgtctggttc acctgcacgc cgacgccacg cggatatgtc ggctcgccga actcgcggct
     1381 gttggtgcgg ccggcccggc cttcggtcca ctgtgcgccg gcatccgccg tggcgcttac
     1441 ggtcggccgg tagccggaca gcgcgcgcgg gaggttctca tcggtggcgc ggacgctggc
     1501 tcgctgggcg ccaagggtcg ggttgcccct gtaggcgcgc gccagcgcgc tatcgagcgt
     1561 ctccgccggg gcggccgaag cgctgaacag caataacagg gaagccagcg cataggtcga
     1621 tacgctgtct tgtccagtat gtgtttccgc cacacccacc tgcccctcgg ccggacggtc
     1681 tcacgcccat ccttctgcca agcacaaacg ccctgcatgc tgcgggccac aatagtcgag
     1741 agatacttaa cgacaattgg cacgggccgg gtcggcggcg aatagcggga actggcgcaa
     1801 aaaagcgaca ccccgccgag gtcagaacac gaagccgggc tccgcctgga atcccggcag
     1861 gagaggcgcc gccgcatcga agagcggccg ggccccgaag gcctggccgg cgcgcacgta
     1921 aagcgtcacg ctggcggagc gcccgcgccc ctcgacgcag acgaggcgcc cgccatcgcc
     1981 gagctggtcg aggaggccct gcggcctcac gtccgcggcg ccgttgacca ggatggcatc
     2041 gtagggcgcg gcctcccggt agcctcgctc gagcgggccg accgcggtga ccaccccttc
     2101 ggcgcgcgat gccgcgagac gccggcgcgc ctcgtcggcg atcctctcgc tcgattcgag
     2161 cgccacgacc gaggctccga ggcgggccag gatggcggag gagtagccca acccgcaggc
     2221 tacatcgaga accctggcgc catgtgcgac ggtgagggac tggatcatgc gggcgagcac
     2281 cgccggcgcc agcatgaagc ggcgctcgct ctccaccccc tcggtgaccg ggatgggctg
     2341 atcgatatag gcaaggtcct cccgccccac cgggacgaag cgctctcggg gcacctcgtc
     2401 gaacgcggcg agcagggcca ggtcgttgac gtcgaacgtg cgcagttgcg tgtcgaccat
     2461 caggcgacgg gccttggcga aatcaagcat gagcggcctc gcggaagagc cgcgtcccgg
     2521 atgcatttgc cggcgattgc cgccccaggg gtcgcggccg cggccggacg tgagctggga
     2581 cggccccggt tggccgggtt gccggagaat gcgccagcga gagcgcagcc gaacgccttg
     2641 tggtggatgg cccgtcaaaa cgcaagcgcc ggagcgctcg cctcacgggt gagcggccga
     2701 cctgttcccc ggctttttta cgatggtatg ggactttgga ggcctcgccc ggaatcgaac
     2761 cggggtgcaa ggatttgcag tcctctgcgt agccactccg ccacgaggcc atgccgccga
     2821 tcaagaaaat gtgagcagcg cgccgtcttt accagagccc gcggcgcaag cgcaaccgcg
     2881 ctgcgcgatc tacaatccat gtcgccccgc ggcaatgacg attggggtta atcgtccacg
     2941 gtgatcgtta agccttgcgc gggagggact tgttgctata tcgagcacat cgcgatcccg
     3001 gatagctcag cggtagagca atcggctgtt aaccgattgg tcgcaggttc gaatcctgct
     3061 ccgggagcca cttcctcgcc cctcggaatc gatccgctgt ccatcaagtc cgggggcagg
     3121 ctttcgggaa aaaagctcta ggccggcatg cccggctcgc gcggcacttc ggcccagtgc
     3181 gtcgggtgca aggtctccat gttcatgttc gacacccagc ggcttttctc cggataccac
     3241 tcgccggtct gccagccgcc ctgcttcggg cagtagagga gcaggatctg ggtcggttcg
     3301 cggggggcgc tgtcgatggc tctcggacga ttctcgagct gcgcctctgc gaccgccatg
     3361 atgatttcgc gtacgacccc cgccccgtgc gggtcacgga cgtcgatctg ctgggcgatt
     3421 tcaacaatct tgctgagcgc ggggaaccgc gaagtcattg ccgtacacgg taaaaggggt
     3481 tgtcgtgccg acactgtagc atcggctccg caggaagcta tgcgggcgcc ggcgaaaaat
     3541 cgcgagaggt tcccactcgg cggcggtcac catggtgcgc gcctcgctcc ccggcgcgag
     3601 cacctgcgcc gcgagcggcc catgacaggc ggcataaatg cgcggacacc gtgccggatg
     3661 gcccggctcc gaggcccacc gggccgcccg ggtgatgagt cagcgcgaag atcggtcctg
     3721 aggcaggggc ggccctgcca gcctacggac cggcgcgggc gctacgcttc ttggcagcgt
     3781 cgtctcgatc gggcgccgca ccggcacggt cacaagaacc ttacgtccgg tcaatggatc
     3841 caaaatggtg agggtcataa ctcgtgacct cccaggcaac cggcgcactc tgccccatcg
     3901 ccaccgggag cgctgtgacc ggacgggcac acggcagcga aatcggcgag ccccgaaagc
     3961 cgtgcccaac atgatcgcgg cttgcgcggc atcggccggt tccctacggt cgtgacccct
     4021 tcgctcgcct tgtcccgacg atggttcaga ccgcgcttct cttccgtgac gatgcttacg
     4081 cgcagacctg cgatgccaca gtgctcgagg tgacgccgca gggcatcatt ctcgaccgca
     4141 cggtcttcta tgcccagggc ggcgggcagc cgggcgacgt cggtaccctg cgcaaccgcg
     4201 acggcaccgg catggcgatc gcgaacacgg tttacgggcc cgaccgcgcc agcatcatgc
     4261 acgtcccggc ggcaggcgcc gcgccgttga atccaggcga tcccgtcacg gcgcatctcg
     4321 actggacgcg gcgctatctg cgcatgcgcg tccacaccgc cttgcatctc ctcagcgtcg
     4381 tgctgccgta ccccgtgacg gggggcgcga tcggcgacgg tgacgggcgt ctcgatttcg
     4441 acatcccgga agggggtctc gacaagggcg cattgaccga caagctcaat gcattgatcg
     4501 cccgcgacga tctcgtgcgc gagcgctgga tcaccgacga cgagctcgac gccaacccga
     4561 gcctcgtcaa gacgatggcc gtgaagcccc cacgcggcag cggccgcatc cgtctgatcg
     4621 agatcggcga tatcgacctg cagccgtgcg gcggcaccca tgtgcgccgc accggcgaga
     4681 tcggtcccgt gctggtcacg gacgtcgaga aaaagggcaa gcagaaccgg cgcgtccgca
     4741 tcggcttggc ttgagccctc ctctcccggg cgcgtgcggg gagaggtcga gttgcagcaa
     4801 ccgggtgagg ccccctcccc ggcccctctc cgcaattgag aggacgtaac ggagatccga
     4861 tgccgccccc tcccttcgtc tcgaccgaat ggctgaatca gcgcctcgac gcgcccgata
     4921 tcgtggtcat cgacggctcc tggtatctgc cggcgatgaa tcgcgatccc gacgccgagt
     4981 atctcgccgg gcacattccc ggcgccgtcc ggttcgacat cgacaccatc aaggatccgt
     5041 cctcgtccct gccgcatatg ctgccctcac ccgaggcctt tgcgtcggcc atgcgcgcca
     5101 tgggcatcgg cgacggcatg agcatcgtcg tctacgacgg cgccggcctg ttctcggcgc
     5161 cgcgcgtgtg gtggacgctg cgcacgttcg gggcgcgcga cgtgatgatc ctggagggcg
     5221 gtttccccgc ctggaaggtg gaaggacggc cggtcgagga agggccaggg cggccgcgcg
     5281 cgcggcgcca tttcacggcg cggctcgacc actccgccgt ggccgacgcc gctgcggtgc
     5341 ggattgccct cgaccgcggc acggcgcagg tcgtcgattc ccgcccggcc gaccgcttcc
     5401 gcggcgacgc gcccgatatc gtggtc
//
LOCUS       DATAIQ010001074         4846 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_224708, whole genome shotgun sequence.
ACCESSION   DATAIQ010001074 DATAIQ010000000
VERSION     DATAIQ010001074.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4846)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4846)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4846
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_224708"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1238
                     /locus_tag="VHN20_17670"
     CDS             <1..1238
                     /locus_tag="VHN20_17670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX2727655.1"
                     /translation="MVPQTIELGKTIAGAQASLSNDFQAAAVQVDEVTRTAVLMQEIV
                     AGLVLFLGLAIAYLIGRSIVGPVTGMTGAMTRLAAGDTNLEIPSRDARDEMGAMARAV
                     EVFKQNAIERAQLEAEKADSEARALQEKRRAAAALADEFQSKVGHLIQSLSSASTEME
                     ATAQSMTATADQTTSQSVSVAGAAEQTSANVQTVAVATEELSSSIREIAEQVTKSSSI
                     AGRAANEAKQTDATVQKLAVAAQKIGDVVAMINNIAGQTNLLALNATIEAARAGEAGR
                     GFAVVASEVKELAGQTARATEEITAQIAGIQTETQTAVAAIQTIGATIDEMNAIAAGV
                     AAAMEEQGAATSEIARNVQQAAQGTQVVTGNILDVKRGAGETGSAAAQVLAAAQELSR
                     HSADLGREVDDFLAGVRAA"
     gene            complement(1335..1940)
                     /locus_tag="VHN20_17675"
     CDS             complement(1335..1940)
                     /locus_tag="VHN20_17675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006724918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX2727656.1"
                     /translation="MLEAKGITYAFGGKPVLDRVSVRIACGEVVGLSGPSGAGKSTLA
                     RILAGHLTPQEGSVMLDGAALRPDGFSPVQLLFQSPELAVNPRWRIRDILGEAFTPEP
                     ALLDRFDIAADWLDRYPHELSGGELQRVTIVRCLDPRLRYILADEISAMLDPLTQARM
                     WRSLLDVARERRLGLLMVSHDQALIDRVADRQLALSDAVIA"
     gene            complement(1944..2738)
                     /locus_tag="VHN20_17680"
     CDS             complement(1944..2738)
                     /locus_tag="VHN20_17680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018062740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX2727657.1"
                     /translation="MLKIEHLCLSFVRYHGLLRRMQLPCLTGLSLDVAAGEVVAIVGA
                     SGAGKSLLAHAIVGILPPNARISGQIFYQNEVLSAVRQVRLRGREIALVPQSVASLDP
                     LTRVGRQVAWAARRAGIEASRAPQAARRALAAYGLDDGVLERFPHELSAGMARRVLLA
                     MATVGDARLIVADEPTTGLDADNVATAMAQLRALADQGKAVIVITHDIPAALNIADRV
                     AVIRNGRTHEIAAAAAFDGNGTALATRYARKLWNALPANDFQAEAA"
     gene            complement(2743..3612)
                     /locus_tag="VHN20_17685"
     CDS             complement(2743..3612)
                     /locus_tag="VHN20_17685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006724916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX2727658.1"
                     /translation="MTSIATSGSEARLDASAWSGRRARALLFCGAGGLAIATVVALAF
                     SFGSSGSLTNFAARSLPPSPAHPFGTDPLGRDLFVRTMQGLSLSLWVGLLAAAASAAI
                     ALVLALLATTLGRTVDALVALLTDMFLGIPHLVLLILIAFSLGGGRPAVITAVAVTHW
                     PRLARILRAEILEVLGSDYVRISRRFGRSWAFIARRHLLPHAIPQLVVGTLLLFPHAI
                     LHEAGLTFLGFGFEPNTPAIGVLLSEAMRHITAGYWWLGVFPGCALLLLVLCLDGVGT
                     GLRTFLSPREAQD"
     gene            complement(3609..4649)
                     /locus_tag="VHN20_17690"
     CDS             complement(3609..4649)
                     /locus_tag="VHN20_17690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006724915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX2727659.1"
                     /translation="MSAGHHATASGLGRPSSSAFWLAFAGRRALRLAVLVGAVALASF
                     LLAKASPVDAIEGYLGQASARVSAEQRALIAEYWGFDQPALIQFMRWAGNLIAGDLGF
                     SFIYNAPVAEVIAERARASLALMLAGWLLSGAIGFVLGVVAGGFEDSWGDRIIRTYAY
                     LLASTPTFWLGMLLLIVFSIALGWTPVCCTTPIGVLQQDVSWLERLHHLVLPVSALAL
                     FGIAQITLHTRAKMIEIMRSDFALYAFAQGASRLEVAWRHGARNALLPALTIQFAAIG
                     ELFGGSILAEQVFAYPGLGKATIEAGLRGDLPLLLAISIIATLVVGLGNTIADALYFI
                     ADPRLRARALQS"
     gene            complement(4660..>4846)
                     /locus_tag="VHN20_17695"
     CDS             complement(4660..>4846)
                     /locus_tag="VHN20_17695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018062743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX2727660.1"
                     /translation="AEWDGATGYGMRGDAAWAWLVNLDHIYFANACLDLGKLQIEPHG
                     HGWPITAGISDWKWTCP"
BASE COUNT          857 a         1618 c         1725 g          646 t
ORIGIN      
        1 acatggtgcc gcaaaccatc gagctcggaa agacgattgc cggggcccag gcatccctca
       61 gcaacgattt ccaggcggcc gccgttcagg tcgatgaggt cacgcgcact gctgttctga
      121 tgcaggagat cgtcgcgggc ctcgtcctgt tcctcggcct ggcgattgcg tacctgatcg
      181 gccgcagcat cgtcggcccg gtgaccggca tgacgggcgc gatgaccagg cttgccgccg
      241 gcgacaccaa cctcgagatt ccctcgcgcg acgcccgcga cgagatgggc gccatggcgc
      301 gcgccgtcga ggtcttcaag cagaatgcca tcgagcgggc gcaactcgaa gccgagaaag
      361 ccgattcgga ggcgcgcgcc ctgcaggaga agcgtcgcgc cgccgcggcg ctcgccgacg
      421 agttccagtc gaaggtgggg catctcatcc agagcctgtc gtcggcctcg accgagatgg
      481 aagcgacggc gcagtccatg acggcgaccg ccgatcagac caccagccag tcggtgagcg
      541 tcgcgggcgc tgccgagcag acctccgcca acgtgcagac cgttgcggtg gcgacggaag
      601 agctgtcctc gtcgatccgc gagatcgccg aacaggtgac caagtcgtcg tcgatcgccg
      661 gtcgtgcggc caatgaggcg aagcagacgg acgcgaccgt ccagaagctc gccgtcgcgg
      721 cgcagaagat cggcgacgtc gtcgccatga tcaacaacat cgccggccag accaacctgc
      781 ttgcgctcaa tgccaccatc gaggcggcgc gcgccggcga ggccggacgg ggctttgcgg
      841 ttgtggcaag cgaagtcaag gagctggctg gtcagacggc gcgggcgacc gaggagatca
      901 ccgcgcagat cgccggcatc cagacggaga cccagaccgc cgtcgccgcc atccagacca
      961 tcggcgccac catcgacgag atgaacgcca tcgccgccgg cgtcgccgcc gccatggagg
     1021 agcagggggc cgcgaccagc gagatcgccc gcaacgtgca gcaggcggcg caaggcacgc
     1081 aggtggtcac cggcaatatc ctggacgtga agcgcggcgc cggtgagacc ggctcggcgg
     1141 ccgcccaggt cctcgctgcg gcccaggagc tgtcgcgcca ctccgccgat ctcggccgcg
     1201 aggtcgacga ctttctggcg ggcgtccggg cggcgtgacg tcatcgcaaa gatgagggcg
     1261 cggctgtgcc gcgccccttg caattccgca tctttggggt gcgcccggag ccggggccgt
     1321 gaatcgatgc cgcgtcaggc gatgaccgcg tcggacaacg cgagctggcg gtcggcgacg
     1381 cggtcgatga gcgcctggtc gtggctgacc atgagcaggc ccagtcgccg ttcgcgggcg
     1441 acatcgagca gggagcgcca catccttgcc tgcgtcagcg gatcgagcat cgcggagatc
     1501 tcgtccgcca ggatgtagcg caggcgcggg tcgagacagc gcacgatcgt cacccgttgc
     1561 agctcgccgc ccgaaagctc gtgcggataa cggtcgagcc agtcggctgc gatgtcgaac
     1621 cggtcgagca gcgccggctc cggcgtgaag gcctcgccca ggatgtcgcg aatgcgccag
     1681 cgcgggttga ccgcgagttc gggcgactga aacagcagct gcaccgggct gaagccgtcc
     1741 ggccgcaggg ccgcgccgtc gagcatgacc gagccttcct gcggcgtcag atgtccggcc
     1801 aggatgcgcg ccaatgtcga cttgccggcg ccggacggcc cgctcagccc gacgacctca
     1861 ccgcaggcga tgcggacgga cacacggtcg agaacgggct ttccgccaaa cgcgtaggtg
     1921 atgcctttcg cttccagcat cgcctatgca gcttctgcct ggaaatcatt ggccggcaac
     1981 gcgttccaca gcttgcgcgc gtaccgggtt gcaagcgcgg tgccgttgcc gtcgaacgcg
     2041 gccgcggcgg cgatctcgtg cgtgcggccg ttgcggatga cggcgacgcg atcggcgatg
     2101 ttcagcgccg ccgggatgtc atgggtgatg acgatgaccg ctttgccctg atccgccagg
     2161 gcgcgcagtt gcgccattgc ggtcgcgacg ttgtcggcgt caaggcccgt ggtcggctcg
     2221 tcggcgacga tgagccgggc atcgccgacc gtggccatgg ccaggagcac gcgccgcgcc
     2281 attcctgccg agagctcgtg cgggaagcgc tcgaggacgc cgtcgtcgag accataggcg
     2341 gcgagcgcgc gccgtgctgc ctgcggagcg cgggacgcct cgatcccggc gcgccgcgcc
     2401 gcccaggcga cctgccggcc gacccgcgtc agcggatcga gcgacgcgac cgattgcggc
     2461 acgagtgcga tctcgcgtcc gcgcagacgc acctgtcgca ctgccgagag cacttcgttc
     2521 tggtaaaaga tctgcccgct gatccgggca tttggcggca ggatgccgac gatggcatgc
     2581 gcgagcaggc tcttgccggc gcctgaggcg cctacgatcg cgaccacctc tccggccgcc
     2641 acgtcgagcg acagccccgt caggcacggc agctgcatgc gccgcagaag gccgtggtag
     2701 cggacgaagg agaggcagag atgctcgatt ttcagcatga tctcagtcct gtgcctcgcg
     2761 aggcgaaaga aaggtgcgaa gtccggtccc gacgccgtcg aggcacagga ccagcagcag
     2821 gagcgcgcag ccggggaaga ctccgagcca ccagtatccg gccgtgatgt ggcgcatggc
     2881 ctcggacagc agcacgccga tggccggcgt gttcggttcg aagccgaagc cgaggaacgt
     2941 gaggcccgcc tcgtgcagga tggcatgcgg gaacagaagc agcgtgccga cgacgagctg
     3001 cgggatcgcg tgcggcagga ggtggcgccg ggcgatgaac gcccacgagc ggccgaaccg
     3061 gcgcgagatg cggacatagt ccgagccgag cacttccagg atctcggcgc gcaggatccg
     3121 tgcaaggcgc ggccagtgcg tcaccgccac cgccgtgatg acggccggcc ggccgccgcc
     3181 gagcgagaag gcgatcagga tcaggaggac gagatgcggg atgccgagga acatgtcggt
     3241 caggagcgcg acgagcgcat cgaccgtgcg gcccagggtc gtcgccagca gtgccaggac
     3301 gagggcgatg gctgcgctcg cggcggcggc gagaaggccg acccacaggc tgagcgacag
     3361 tccctgcatc gtgcgcacga acagatcgcg cccgagcgga tcggttccga acgggtgcgc
     3421 tggcgatggc ggcaggctgc gcgccgcgaa gtttgtcagg ctgccgctgc tgccgaagct
     3481 gaaggcgagc gccaccaccg tcgcgatcgc gaggccgcct gcgccacaga acagcagcgc
     3541 gcgtgcgcgc cgcccgctcc acgcgctcgc gtcgagccgg gcttccgagc cgctggtcgc
     3601 gatgctcgtc atgactggag cgctcgcgcc cgcagccgcg ggtcggcgat gaaatacagc
     3661 gcatcggcga tcgtatttcc gaggccgacg acgagcgtcg cgatgatcga gatcgccagc
     3721 agcagcggaa ggtcgccgcg cagccccgcc tcgatggtgg ccttgccgag cccgggataa
     3781 gcaaaaacct gctcggccag gatcgagccg ccgaacaatt ctccgatcgc ggcgaactgg
     3841 atggtgaggg caggcagaag cgcgttgcgc gcaccgtgcc gccacgcgac ctcgagacgg
     3901 gaggcgcctt gcgcgaaggc gtagagcgcg aaatccgagc gcatgatctc gatcatcttg
     3961 gctcgggtat gcagcgtgat ctgcgcgatc ccgaaaagcg cgagggcaga gaccggcagg
     4021 accagatgat gcaggcgctc gagccagctg acgtcctgct gcaggacgcc gatcggcgtg
     4081 gtgcagcaga ccggcgtcca tccgagcgcg atcgagaaca cgatcaggag cagcatgccg
     4141 agccagaatg tcggcgtcga cgcgagcagg taggcgtagg tgcggatgat gcggtcgccc
     4201 cacgaatcct cgaagccgcc ggcgacgacc ccgaggacga agccgatggc gccggagagc
     4261 agccatccgg cgagcatcag cgccaagctg gcgcgcgccc gctcggcgat gacctccgcg
     4321 accggcgcat tgtagatgaa gctgaagccg agatcgcccg cgatcaggtt tccggcccag
     4381 cgcatgaact ggatcagcgc cggctggtcg aaaccccaat attcggcaat gagcgcccgc
     4441 tgctccgcgc tgactcgcgc cgatgcctgc ccgagatagc cttcgatcgc atcgacgggc
     4501 gaagccttcg ccagcaggaa cgaggcgagc gcgacggcgc cgaccagcac ggcgaggcgc
     4561 agggcgcgtc gtcccgcgaa ggccagccag aacgccgagg acgagggacg tcccagccca
     4621 gatgccgttg cgtgatgtcc ggcgctcatc cgcgagcgct caagggcagg tccatttcca
     4681 atcggaaatg cccgcggtga tcggccagcc atgcccgtgc ggctcgatct gcagcttgcc
     4741 gagatcgagg caggcgttgg cgaaatagat gtggtcgagg ttgacgagcc acgcccaggc
     4801 ggcgtcaccg cgcatcccgt atcccgtcgc gccgtcccac tccgcc
//
LOCUS       DATAIQ010001075         1569 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_362226, whole genome shotgun sequence.
ACCESSION   DATAIQ010001075 DATAIQ010000000
VERSION     DATAIQ010001075.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1569)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1569)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1569
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_362226"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..587
                     /locus_tag="VHN20_17700"
     CDS             <1..587
                     /locus_tag="VHN20_17700"
                     /inference="COORDINATES: protein motif:HMM:NF039892.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="chromosome partitioning protein ParA"
                     /protein_id="HEX2727661.1"
                     /translation="TEKILTQTREQLRDRTEELKTAERVAREALLEKAALERRVQAGD
                     QELQRQTTTAAQNNEARMELDERCEMLTKAIAAKDSLLQRADDRASMLLERIDQLTRK
                     FDEERTTLETNNKKLWDDLQRERSERALAQGALETARRTRIETERELARFQLERRPGA
                     DTEESVQAAPPPAPTAPADGPEPASNVMPFKPDA"
     gene            complement(1063..>1569)
                     /locus_tag="VHN20_17705"
     CDS             complement(1063..>1569)
                     /locus_tag="VHN20_17705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727662.1"
                     /translation="KLDPVAELSFSQLRFRGDPGRPAGRSELHRQASALGAVIADDAY
                     ARAFGLVKPEPDLVRKPRIESIRPARRVGPDGQILFDIIAEVSQCRIIDRGGRHFPSH
                     GGSTIILGPEGEIRYVIRKRLGVEAREKAQCDFMESVHGKRFWDFSGDTPGPRAHVLK
                     RLHDPATG"
BASE COUNT          289 a          526 c          536 g          218 t
ORIGIN      
        1 tcaccgagaa gatcctcacc cagacgcgcg agcagttgcg cgacaggacc gaggagctca
       61 agacggccga acgggtggcg cgcgaagcgc ttctcgagaa agccgcactc gagcgccgcg
      121 tccaggcggg cgatcaggaa ctgcagcggc agacgacgac ggcggcgcag aacaacgaag
      181 cgcgcatgga gctggacgag cgctgcgaga tgctgaccaa ggccatcgcc gcgaaggaca
      241 gcctcctcca gcgtgccgac gaccgcgcca gcatgctgct cgagcggatc gaccagctga
      301 cgcgcaagtt cgacgaggag cggaccacgc tcgagacgaa caacaagaaa ctctgggacg
      361 acctgcagcg cgagaggtcg gaacgcgccc tggcgcaagg cgccctcgaa accgcccggc
      421 gcacgcgcat cgagaccgaa cgcgagctgg ccaggttcca gctggagcgg cgtcccggtg
      481 cggacacgga agaaagcgtg caggccgccc cgccgcccgc gccgacagcg ccggccgacg
      541 gtccggaacc ggcgagcaac gtaatgccgt tcaagccgga cgcgtgatgc ggatgcaact
      601 cgcataagct cctccggaag ctcgacgcgg tccttgggcc aagggagagc aaccgaccgt
      661 aggcaccgac acgtgtcgac acgcgcgcga ttcctttcgg cgccgcaatt ctgcgcatag
      721 tgggtccgac accgaacccg gggcccgcca tgccctcgaa aatcatcaag tttcccgcga
      781 tcatcccgac ggcgctcgcc ctcgttccgc tccggcgcgc atctcctcga gatgccgaac
      841 aagatcaggc tggctccgga ggcctacttc gccgccagca gctttacgcc ggctgctgga
      901 tgacgggcct ccttcacatg gccgccctga tcattgttgc catcctggaa gtgacgctac
      961 gccacgaccg ggggcgggcg gtcgcgatgc tttgaggcgg cctggaggtt tgctggagat
     1021 tttctgagga atcgggatgc cttgtcagtt cgcgccggcg cctcacccgg tcgcggggtc
     1081 gtgcagccgc ttcagcacgt gcgcgcgcgg cccgggcgtg tcgcctgaaa aatcccagaa
     1141 ccgcttgccg tgcacgctct ccatgaagtc gcattgcgcc ttctcgcgcg cctcgacgcc
     1201 gaggcgcttg cggatgacgt agcggatctc gccttcaggc ccgaggatga tggtgctacc
     1261 gccatgcgag gggaaatggc ggcccccgcg gtcgatgatg cggcactggg agacttcggc
     1321 aatgatgtcg aacaggatct ggccgtcggg tcccacgcgg cgggccggcc ggatcgactc
     1381 gatgcgaggc ttgcgcacca ggtcgggctc aggctttacg aggccgaaag cacgggcata
     1441 ggcgtcgtcg gcgatgacgg cgccgagcgc cgacgcctgc cggtgaagct cgctgcgtcc
     1501 ggcggggcgc ccggggtcac cccgaaaccg cagctgggag aagctgagct ccgcgacggg
     1561 atcgagctt
//
LOCUS       DATAIQ010001076         3450 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_269071, whole genome shotgun sequence.
ACCESSION   DATAIQ010001076 DATAIQ010000000
VERSION     DATAIQ010001076.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3450)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3450)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3450
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_269071"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            290..952
                     /locus_tag="VHN20_17710"
     CDS             290..952
                     /locus_tag="VHN20_17710"
                     /inference="COORDINATES: protein motif:HMM:NF015682.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RraA family protein"
                     /protein_id="HEX2727663.1"
                     /translation="MPTRMLRPAEVLPLGDEVLRGWAGIPTTIASDVCGGRLLLDPGI
                     RPLRALGGSRLFGPAMTAWCEPADIGAAIHAIEIAQPGDIIVIDAGASLQTAVVGEHL
                     CGVARRRGVAGLVAHAAVRDVATLAAWPDFPVFALGQTARGPVSVERGAVNDTIICGG
                     VVVRPHDLVLADDDGVIVIPREEAEPLLAKARDKLALEQEWDRRLSAGESMLDVFGLR
                     GS"
     gene            complement(982..1266)
                     /locus_tag="VHN20_17715"
     CDS             complement(982..1266)
                     /locus_tag="VHN20_17715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008598418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2160 domain-containing protein"
                     /protein_id="HEX2727664.1"
                     /translation="MAALSWMAWTPETAAFFAFVACLLVAMTVWELRSPGGAPRRGIL
                     AIETTRGDRLFISLLGAAYLHLAWLAVLGTPLFGATVLALLFAAAVFRWV"
     gene            complement(1283..2113)
                     /locus_tag="VHN20_17720"
     CDS             complement(1283..2113)
                     /locus_tag="VHN20_17720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008598419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEX2727665.1"
                     /translation="MRDDARRGSGLRRLAWLVPALYILFLMLPIYWLVSMSFKTTNEI
                     LGAFTLWPNRFTLDNYQKIFTDPTWYNGYRNSLIYVVINTLISVTVALPAAYAFSRYR
                     FIGDKHLFFWLLTNRMAPAAVFALPFFQLYSAIGLFDTHIAVALAHCLFNIPLAVWIL
                     EGFMSGVPKELDETAYLDGYGFWRFFLRIFVPTIAAGIGVAAFFCFMFSWVELLLAKT
                     LTSVAAKPIAATMTRTASSSGYELGLLAAAGTLTIIPGAFVIYFVRNYIAKGFALGRV
                     "
     gene            complement(2110..2979)
                     /locus_tag="VHN20_17725"
     CDS             complement(2110..2979)
                     /locus_tag="VHN20_17725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003549532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEX2727666.1"
                     /translation="MAARTENQKGWLFVLPVVVLVAFNAVIPLMAVVNYSVQETFGNN
                     IFFFEGVKWFQDVLHSDRFHASLLRQLAFTGIILLIEVPLGVAIALAMPRRGPWVSVC
                     LVLMALPLLIPWNVVGAMWNIFALPDIGLLGRLLNGLGLNYNYTQQPLSAWATLIAMD
                     VWHWTSLVVLLAYAGLSAIPEAFYQAARIDGASGWAVFRYIQLPKMRKVLTIAVLLRF
                     MDSFNIYTEPFVLTGGGPGNSTTLLSIDLVKIALGQFDLGPAAAMSLIYFLIILLLSW
                     IFYTVMTKGEDAR"
     gene            complement(2985..>3450)
                     /locus_tag="VHN20_17730"
     CDS             complement(2985..>3450)
                     /locus_tag="VHN20_17730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019995565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2727667.1"
                     /translation="TEALTFADKVVVMHEGTVVQIGTPVELFERPRHTFVGHFIGSPG
                     MNVLPCRVEAGRVMLAEHPIVVQNPPAAAFDGRRTEIGVRPEFVRFAGDGVPVDVVKV
                     SDAGRHRIVEARHDGGRINVLVTEGEAMPAERACVRFDPACTRLYADGWLVE"
BASE COUNT          626 a         1122 c         1200 g          502 t
ORIGIN      
        1 gttccagtcg gtgacgacgt cggcgcgcgc cggcgcggcg atgatggcgg cggcaaccgc
       61 tcccggcagc acgatcgcca ggggcaactt caataatgtt tccatggaag gcctccctcc
      121 gatgcccgcg aggccgatcc tttcgtgact ttatggttcc ctggctcacg cggatggacg
      181 cgcattatgc gcctttcggc gcggccttgt gtgaaccgct taacgttcgg gtgtagcaaa
      241 acacgcgcga cccgctctac gctgccgtcc tcaggacaag gagcaagcca tgcccacacg
      301 gatgttgcgg ccggccgagg tgctgccgct cggcgacgag gtgttgcggg gctgggccgg
      361 gattccgacg acgatcgcat cggacgtgtg cggcggccgt ctgctgctcg atcccggcat
      421 ccggccgctg cgcgcgctcg gcggctcgcg gctgtttggg ccggccatga cggcctggtg
      481 cgagcctgcc gacatcggtg ctgccattca cgcgatcgag atcgcgcagc cgggcgacat
      541 catcgtcatc gacgccggcg caagcctgca gaccgccgtc gtcggcgagc acctgtgcgg
      601 cgtcgcccgc cgcaggggcg tcgccggcct cgtcgcccac gccgcagtgc gcgacgtcgc
      661 gaccctggcg gcgtggcccg acttcccggt ctttgccctc ggacagaccg cccgcggccc
      721 cgtgtcggtc gaacggggcg cggtcaacga caccatcatt tgcggcggcg tcgtggtcag
      781 gccgcacgac ctcgtgctcg ccgacgatga cggcgtcatc gtgatcccgc gcgaggaagc
      841 ggagccgctg ctggccaagg cgcgtgacaa gctcgccctc gagcaggaat gggaccggag
      901 gctgtcggcc ggcgaatcga tgctcgacgt cttcgggctt cgggggagct agactccgcc
      961 gtggcggcga actcggtacc gtcacaccca ccggaacacc gccgccgcga acagcagcgc
     1021 caggacggtt gcgccaaaca gcggcgtacc gagaacggcg agccaggcga ggtggagata
     1081 ggcggccccg agcagggaga tgaacaggcg gtcgccgcgc gtcgtctcga tcgccaggat
     1141 gccgcgccgc ggcgcgccgc cgggcgatcg cagctcccac acggtcatgg cgacgagcag
     1201 acaggcgacg aaggcgaaga acgccgccgt ctccggggtc cacgccatcc acgacagggc
     1261 cgccatcctg tcctcccctg ccttacacgc gccccagggc aaaacccttg gcgatgtagt
     1321 tgcgcacgaa atagatgacg aacgctcccg gaatgatggt cagcgtcccg gccgcggcga
     1381 gcagcccgag ctcgtagccc gagctgctgg cggtgcgcgt catggtggcg gcgatcggct
     1441 tggccgcgac cgaggtcagc gtcttggcga gcaggagctc gacccaggag aacatgaagc
     1501 agaagaacgc cgccacgccg atgccggcgg cgatggtcgg cacgaagatg cgcaggaaga
     1561 agcgccagaa gccgtagccg tcgagatatg cggtctcgtc gagctccttg ggtacgcccg
     1621 acatgaagcc ttcgagaatc cacaccgcga gggggatgtt gaacaggcaa tgcgccaggg
     1681 ccaccgcgat atgcgtgtcg aacaggccga tcgccgagta gagctggaag aagggcagcg
     1741 cgaagacggc cgccggcgcc atgcggttgg tcaggagcca gaagaacagg tgcttgtcgc
     1801 cgatgaagcg gtagcgcgaa aacgcatagg ccgccggcag cgcgacggtg accgagatca
     1861 gcgtgttgat caccacgtag atcagggaat tcctgtagcc gttgtaccag gtcgggtcgg
     1921 tgaagatctt ctggtaattg tcgagggtga atcggttcgg ccacaaggtg aacgcgccca
     1981 ggatctcgtt ggttgtcttg aacgacatgc tgaccagcca gtagatcggc agcatcagga
     2041 acaggatgta gagcgcgggc acgagccacg cgagccgccg cagccccgat ccacgccgtg
     2101 cgtcgtctct catcgcgcgt cctcgccttt ggtcatcacg gtgtagaaga tccacgacag
     2161 cagcaggatg atcagaaaat agatcagcga catggccgcg gccgggccga ggtcgaactg
     2221 gccgagcgcg atcttgacga ggtcgatcga caggagggtg gtcgaattgc cggggccgcc
     2281 gccggtcagg acgaatggct cggtgtagat gttgaagctg tccatgaagc gcaggaggac
     2341 ggcgatcgtc agcaccttgc gcatcttcgg cagctggatg tagcggaaca ccgcccagcc
     2401 ggaggcgccg tcgatccggg cggcctggta gaaggcctcg gggatggcgc tcagcccagc
     2461 ataggccagc agcaccacga gcgacgtcca gtgccacacg tccatggcga tcaacgtcgc
     2521 ccaggccgag agcggctgct gcgtgtagtt gtagttcagg ccgaggccgt tcagcagccg
     2581 gccgagcagg ccgatgtcgg gcagcgcgaa gatgttccac atggcgccga cgacgttcca
     2641 cgggatcagc agcggcagcg ccatcaggac gaggcacacc gagacccagg ggccgcgccg
     2701 cggcatggcg agcgcgatgg cgacgccgag cggcacctcg atgagcagga tgatgcccgt
     2761 gaaggcgagc tggcgcagca gcgaggcgtg aaagcggtcg gaatgcagca cgtcctggaa
     2821 ccacttcacg ccttcgaaga agaagatgtt gttgccgaac gtctcctgca ccgaatagtt
     2881 gaccaccgcc atgagcggga tgacggcgtt gaaggcgacc agcacgacga ccggcaggac
     2941 gaacagccag cccttctggt tttcggtccg ggccgccatg gcgctcactc caccagccag
     3001 ccgtcggcgt aaagccgcgt gcaggcagga tcgaagcgca cgcatgcgcg ctcggccggc
     3061 atcgcctcgc cctccgtcac aaggacattg atgcggccgc cgtcgtgccg cgcctcgacg
     3121 atgcggtggc gtccggcgtc gctgaccttg acgacgtcga ccggcacgcc gtcgccggcg
     3181 aagcgcacga attcgggccg cacgccgatc tcggtgcgcc ggccgtcgaa ggcggcggcc
     3241 ggcggattct ggaccacgat cggatgctcc gccagcatca ccctgcccgc ctcgacgcgg
     3301 cacggcagca cgttcatgcc cggcgagccg atgaagtggc cgacgaaggt gtggcgcggc
     3361 cgctcgaaca gctcgaccgg cgttccgatc tgcaccaccg tgccctcgtg catgacgacg
     3421 accttgtcgg cgaaggtcag ggcttcggtc
//
LOCUS       DATAIQ010001077         4543 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_224744, whole genome shotgun sequence.
ACCESSION   DATAIQ010001077 DATAIQ010000000
VERSION     DATAIQ010001077.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4543)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4543)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4543
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_224744"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            355..936
                     /locus_tag="VHN20_17735"
     CDS             355..936
                     /locus_tag="VHN20_17735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015931268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase-like cysteine peptidase"
                     /protein_id="HEX2727668.1"
                     /translation="MLMAGGVAAEAQTLAALPSTQPIEKNGTARPVLGWVKFCERYPE
                     ECRVDTSEAAVVTVTAQVWRNIVAVNRRVNARIKPLTDKEHWGVVDSWDFPDDGLGDC
                     EDYQLLKRKILVEQGLPRRAMRMTVVIDEQGEGHAVLMVRTDRGDFILDNKTNSVLAW
                     DKTGYTFVKREGQDSTTWASLGGLASPVTTANR"
     gene            1056..1616
                     /locus_tag="VHN20_17740"
     CDS             1056..1616
                     /locus_tag="VHN20_17740"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009466686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HEX2727669.1"
                     /translation="MTSTVDAPDWSTIPAPRDDGAVRHLVGARMASVRLPATSGDAVD
                     VSALRGRTIVYAYPRTGRPGIDNPDGWDMIPGARGCTPQTCSFRDHFAELTGLGVQHL
                     FGLSTQDPDYQREAAERLHLPFAILSDERLNLTRAMNLPTFATGGMTLLKRFTLVIDD
                     GTIRHVFYPVFPPDRSASDVVDWLRR"
     gene            complement(1712..1999)
                     /locus_tag="VHN20_17745"
     CDS             complement(1712..1999)
                     /locus_tag="VHN20_17745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014494723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727670.1"
                     /translation="MDSLTAFGLVAVTAMLVFYALENRSHWFVLAFAGACVLASAYGF
                     LQGAWPFGVVEAIWAAVALHRWSMVRRHGHRFAEKDHAAQSETERDRFNLN"
     gene            complement(2010..2540)
                     /locus_tag="VHN20_17750"
     CDS             complement(2010..2540)
                     /locus_tag="VHN20_17750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004109328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma carbonic anhydrase family protein"
                     /protein_id="HEX2727671.1"
                     /translation="MPIYSLDGVAPILPEAGRYWVAPDAHVIGRVRLGTDVSVWFGSV
                     IRGDNELIDLGERTNIQEGCMLHTDPGYPMTIGADCTIGHHAILHGCTVAGNSLIGMG
                     ARLLNGARIGANCIVGAHALVTEGKEFPDNSLIVGAPAKAVRSLDEAAAERLRQTALH
                     YVRNFNRFAKGLSRLD"
     gene            complement(2606..2935)
                     /locus_tag="VHN20_17755"
     CDS             complement(2606..2935)
                     /locus_tag="VHN20_17755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012320709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727672.1"
                     /translation="MQIDPAALESFQALGLGFALAGLLATAFELFTNRRASFGLLEKG
                     GVVALACVPILVFSAPFIILRNTVRGRRFERRPIGFVFAATVIAGFWSLMCGRLVLDL
                     AHMIAGA"
     gene            complement(3262..3741)
                     /locus_tag="VHN20_17760"
     CDS             complement(3262..3741)
                     /locus_tag="VHN20_17760"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX2727673.1"
                     /translation="MQPTSGEAAILLICDDEALLRAFAADALQDAGYRVLEARDGAEA
                     LAILNFRDDVVAVFTDVAMPVMNGIMLATIVRARWPHIGVVVTSGALPDGARLELPPG
                     ARFIRKPYTAGVLVAEIRAVLAAQAGAAVSLQSIPTLQPGKPHGAGGIAQPLSEPDE"
     gene            complement(3969..4181)
                     /locus_tag="VHN20_17765"
     CDS             complement(3969..4181)
                     /locus_tag="VHN20_17765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013166826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3126 family protein"
                     /protein_id="HEX2727674.1"
                     /translation="MDKTEMAKVERYLRQTFSNHAIRVVARPKKTDSAEVYIGEEFIG
                     VLFVDDEEGDRSFNFQMAILDTDLED"
     gene            complement(4288..>4543)
                     /locus_tag="VHN20_17770"
     CDS             complement(4288..>4543)
                     /locus_tag="VHN20_17770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HEX2727675.1"
                     /translation="GGTGKERGDRHPKIRRGVMIGAGAKILGNIEIGECCRVAAGSVV
                     LQSVPRNSTVAGVPARVVGTAGCAEPARSMDQLIRDMEGI"
BASE COUNT          761 a         1510 c         1531 g          741 t
ORIGIN      
        1 gtcctttggg cagtcgcgag acgccgcatc ttttttgccg tccattgccc agtcgcaaga
       61 ctggccgccg cagcttttga ggtccattgg ccagtcgcac gacgggctcc gtatcttttg
      121 tgccactatg gaaccaaact acgaccttgg cgttagcttt ctcttaactt tcggcttgag
      181 ccggcccggc ccccgtgcga gcttgattcc aagaatcgtc aagcaagcaa caggaatggg
      241 ggcatgcggc aggccgtttt cgggcgtttg agtaacagtg ctcaagtctg ggcgccagca
      301 cgcgtatttg caagccttgc cgcccggacc ctgcgtttcg gcgccctggc ggccatgctt
      361 atggcgggcg gggtcgcggc cgaggcgcag acgctggccg ctctcccgtc cacccagccg
      421 atcgagaaga acggcaccgc ccgccccgtg ctgggctggg tcaagttctg cgagcgctac
      481 ccggaagagt gccgggtcga cacctccgag gcggccgtcg tcacggtcac ggcgcaggtc
      541 tggcgcaaca tcgtggcggt caaccgacgg gtcaacgcgc gtatcaagcc cctgaccgac
      601 aaggagcatt ggggtgtcgt ggacagctgg gactttccgg acgacggtct cggcgactgc
      661 gaagactacc agctcttgaa gcgcaagatc cttgtcgagc aggggctgcc gcgccgcgcc
      721 atgcgcatga ccgtcgtcat cgacgagcag ggcgaaggcc acgccgtcct gatggtgcgc
      781 accgaccgcg gcgacttcat cctcgacaac aagaccaatt cggtcctggc gtgggacaag
      841 accggctaca ccttcgtgaa gcgtgaaggc caggacagca ccacctgggc gtcccttggc
      901 ggcctcgcct ccccggtcac gaccgccaat cgttaagctg gccggagcgg gaaggtcccg
      961 ccccgcttgt gttcagaaca ggggattggg gggatggcag tggccatccc ctttgctttt
     1021 ggcgatgatc gatctcgcag aaccccgagg gatcgatgac gagcaccgta gacgccccgg
     1081 attggtcgac gatccccgcc ccgcgtgacg acggggccgt acgccacctg gtcggcgcgc
     1141 gcatggcatc cgtgcgcctc ccggcgacga gcggcgacgc cgtcgatgtg tcggccttgc
     1201 gcggacgaac gatcgtctac gcgtaccccc ggaccggtag gcccggcatc gacaacccgg
     1261 atgggtggga catgatcccc ggcgcgcgcg gctgcacgcc acaaacctgc tccttccgcg
     1321 accacttcgc cgaattgacg ggcctcgggg tgcaacacct gttcggcctg tcgacgcagg
     1381 atccggacta ccagcgtgaa gcggccgagc gcctgcacct tcccttcgcc atcctgtcgg
     1441 acgagcgcct caatctgacg cgggcgatga acctgccgac cttcgcgacg ggcggcatga
     1501 cactcctgaa gcggttcacg ctcgtgatcg acgacgggac gatccgccac gtgttctacc
     1561 ccgtgttccc gccggaccgg agcgccagcg acgtcgtcga ctggctgcgt cgctagtctc
     1621 attgagtcgc atgatctttt tcggcgaagt ggtctccacc cccggatcaa gtccggggca
     1681 ggctttcgcc ggatcatgct ccagggcggg atcaattcag attgaatcga tcccgctccg
     1741 tttctgattg agccgcatga tctttctcgg cgaagcggtg tccgtgtcgc cggaccatgc
     1801 tccagcggtg gagcgcgacg gcggcccaga tcgcctcgac cacgccgaac ggccacgcgc
     1861 cctgcagaaa cccgtaggcg gaggcgagca cgcaggcgcc ggcgaacgcc aggacgaacc
     1921 aatggctgcg gttctcgagc gcgtagaaca ccagcatcgc cgtgacggcg acgaggccga
     1981 aggcggtgag actgtccatg aggcgtggct cagtcgagcc gcgacaggcc cttggcgaag
     2041 cggttgaagt tgcgcacgta gtgcagcgcg gtctggcgca ggcgttcggc cgcggcctcg
     2101 tcgaggctgc gcacggcctt cgccggcgcc cccacgatca gggaattgtc ggggaattcc
     2161 ttgccctccg tgaccagggc atgggcgccg acgatgcagt tggcgccgat gcgcgcgccg
     2221 ttgagaaggc gggcgcccat gccgatcagc gaattgccgg cgaccgtgca gccgtgcagg
     2281 atggcgtggt ggccgatggt gcaatccgcc ccgatggtca tcggataacc ggggtcggta
     2341 tgcagcatgc agccttcctg gatgttggtg cgctcgccga ggtcgatcag ctcgttgtcg
     2401 ccgcgaatca cggagccgaa ccacacgctc acgtcggtcc cgagccgcac gcggccgatc
     2461 acgtgcgcgt cgggcgcgac ccagtagcgg cccgcctcgg gaaggatcgg cgcaacgccg
     2521 tccagagagt agatcggcat ttgtccccgc ctcgtatgtc ttgtcccgtc ttctcagggg
     2581 acaagagctt gcgcggggag acgcgtcaag cgccggcgat catgtgcgcg aggtcgagga
     2641 ccaggcgccc gcacatcagg ctccagaagc cggcgatgac cgtcgcagcg aacacgaagc
     2701 cgatcggccg gcgctcgaag cggcggccgc gcacggtgtt gcgcaggatg atgaagggcg
     2761 ccgaaaagac caggatcggc acgcaggcga gcgccacgac gccgcccttc tcgaggaggc
     2821 cgaagctggc gcgccggttc gtgaacagct cgaacgcggt ggccagcagc ccggccaggg
     2881 cgaagcccag tccgagcgcc tgaaacgatt ccagagccgc ggggtcgatc tgcatggaag
     2941 gggcccttcg cctgtgccgc gcacccaccc tgccccgctt ttaacggaac gttaagcgtt
     3001 tccgccggga agggtaaatg ccgcccgcgg gaccgcgggc gaggcgcgca ggcttccggc
     3061 gggacgggcg tcaccgtcac ggcgccggtc gagcccggct gggttcagcc ggagctttga
     3121 gcatgatccg gcgaaagcct gcccccgggc ttgatccggg ggtggacacc acttcgccga
     3181 aaaaggcttg tgccggaagc tgaattgatc cctctgagcg gtgcgcagcg atcgtgagcc
     3241 acggagcgca tttacgcgca gctattcgtc cggttccgac agcggctgtg cgatcccgcc
     3301 ggcgccatgc ggctttccag gctgcagcgt gggaatgctt tgcagcgaga ccgcggcccc
     3361 ggcctgtgca gcgaggacgg ccctgatctc ggcgacgagc accccggccg tgtagggctt
     3421 ccggatgaat cttgcaccgg gcggcagctc gagacgagcg ccgtccggca gcgcgccgga
     3481 cgtgaccacg accccgatat gcggccatcg cgcccggacg atagtcgcca gcatgatgcc
     3541 gttcatgacc ggcatcgcca catcggtgaa cacggcgacg acgtcgtcgc gaaaattcag
     3601 gatcgcgagc gcctctgcgc catcgcgcgc ttcgagcacg cggtagcctg cgtcctggag
     3661 cgcgtcggcc gcgaaggcgc ggagcagagc ttcgtcgtcg cagatgagaa ggatcgcggc
     3721 ttcgccgctg gttggctgca cgaactcctc ccggtgaacg gtgagggcgg ccgagcctcg
     3781 ctagggcggt tacagctgta gtggaattcc cggtcgggca ctacaggcta tccggcgacg
     3841 cggatcgggc tcaccggaag agagtctgcg atcgatgggt gaccggagcg cgaccgggtc
     3901 aacggcccgc cgcaagcgat atcgccccga accatgtccg aggcagcttt cgtcgcaaag
     3961 ctccgggctc aatcctcgag gtcggtgtcg aggatcgcca tctggaaatt gaacgagcga
     4021 tcgccctcct cgtcgtcgac gaacagcacg ccgatgaatt cctcgccgat atacacctcg
     4081 gcggagtcgg tcttcttcgg gcgcgcgacg acgcggatcg cgtggttcga gaaggtctgg
     4141 cgcagatagc gctcgacctt ggccatttcc gtcttgtcca ccgagacctc atcaactgtg
     4201 ccgcgccgtg ccccttgcca tgctggcgcg gggcgggcaa gtgcgcattt ccagcgaagg
     4261 gaagccgctt ggccgcagaa cgtgccgtca gattccctcc atgtcgcgga tcagctggtc
     4321 catcgagcgc gccggctccg cgcagccggc cgtgccgacg acgcgggccg gcacgccggc
     4381 caccgtcgag ttgcgcggca ccgattgcag gaccaccgac ccggccgcga cgcggcagca
     4441 ttcgccgatc tcgatattgc cgagaatctt ggcgccggcg ccgatcatga cgccgcggcg
     4501 gatcttggga tggcggtcgc cgcgctcctt gccggtgccg ccg
//
LOCUS       DATAIQ010001078         3638 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_269157, whole genome shotgun sequence.
ACCESSION   DATAIQ010001078 DATAIQ010000000
VERSION     DATAIQ010001078.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3638)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3638)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3638
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_269157"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..939
                     /locus_tag="VHN20_17775"
     CDS             <1..939
                     /locus_tag="VHN20_17775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008964010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ldh family oxidoreductase"
                     /protein_id="HEX2727676.1"
                     /translation="GVARVPRYVEALEAGYVVKGQTAEVVTDGGSFVVLDGKFGFGQT
                     VAPQAVAVGIERACANGLCVTALRNAGHIGRVGAYTETALAAGLISIHFVNVAGSVLV
                     APFGGVERRFSTAPFSVGVPLPGRPLLLDFATSEVAEGKVLVASRGGKPLPADALVEP
                     DGRLSGDPRTLYGPYTPIGPRDLTKGTGAIRAFGEHKGSGLALMCEMLAGALTAGGTS
                     GPVDRRERIANGMLSIFISPGHFGTKAEFERTGLAYVEWVSGCRPIDPAAPVKLPGEP
                     EAATRTMRLKEGVPLPQDTWASIRATAERLGVTMAS"
     gene            complement(965..1348)
                     /locus_tag="VHN20_17780"
     CDS             complement(965..1348)
                     /locus_tag="VHN20_17780"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX2727677.1"
                     /translation="MMAPQSSVPRILVVEDDANLHDLIVRVVQKSGCEAVSAHSGEQA
                     LSILRDPAEHVDWLLTDIRLSGAVDGWVVGSEFSLTHPLRPIIYMSGVERDSQSRAAV
                     NSIFLQKPVDVHHLLRTFQELTAAA"
     gene            complement(1593..3443)
                     /locus_tag="VHN20_17785"
     CDS             complement(1593..3443)
                     /locus_tag="VHN20_17785"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HEX2727678.1"
                     /translation="MNRFVKRAADAGAQKLSPSADTRQAKPTLPQVGTWEWDFSTGAF
                     TWSDGVYRLLGLAPGSAPASYDLLMSKVHPDDRVDSEAARIAALSKGTAINSEFRILR
                     PDGEIRWLANKGELFANAAGKPSWAAGALFDITDIREAQLDLAAREERYRALATVKAL
                     GEWRADSSGELIEAKFWTAFTGQSDEEFAEHGWLKAVHPDDAGSISALWHEALRLGCG
                     VEFTYRVRHRCGDYRWVRTKAVPLKNPDGSVREWIGSDEDITPRREAEENLRVNENRL
                     RLALEAARTITWDYDIGTGHITRSQNAPQVLGFGSGPVEDFFNRIHPEDSIRLREALR
                     RTLELGERYDVEFRVIERCGRTRWLHARGEVLQTAHKRPDRMIGVTFDITSEKEANLD
                     QRRAREELDDMTARLHALGQATGGGFVWTSDPTGQVSDDMEDWRAFTGQSPKDVQGWG
                     WLNAVHPADRERVREVMQQLIDTQGPHAVDYRLRHHSGEYRWFRYRAAPVLRRDRTVA
                     EWIGMCEPLRSPTPRDVSDAPGPAGFDEQPQLISGCQVRAARAIVGWSVRDLAEASGV
                     SGSTIRRVEEDGGLPETRDTRKLDIIRRTLEEAGVVFLPAPDGKGGVRPV"
BASE COUNT          563 a         1209 c         1214 g          652 t
ORIGIN      
        1 ggggttgcgc gggtgccgcg ctacgtcgag gcgctcgagg ccggctacgt cgtcaagggc
       61 cagacggccg aggtcgtgac ggacggcggc agcttcgtcg tgctcgacgg caagttcggc
      121 ttcggccaga ccgttgcgcc gcaggcggtt gcggtcggca tcgagcgcgc atgcgccaac
      181 gggctgtgcg tgacggcgct gcgtaatgcc gggcatatcg gccgggtcgg cgcgtatacg
      241 gaaacggcgc ttgcggctgg attgatctcg atccacttcg tcaatgtcgc gggcagcgtc
      301 ctggtcgcgc cgttcggcgg tgtcgagcgg cgcttctcga ccgctccctt cagcgtcggc
      361 gtgccgttgc ccggccgccc gctgctgctc gatttcgcaa cctcggaggt tgcggagggc
      421 aaggtgctgg tcgcatcgcg aggcggcaag cctctgccag ccgatgcgct tgtcgagccg
      481 gacggacggc tgtcgggcga tccgcgcacg ctttacggcc cctacactcc gatcggcccg
      541 cgcgatctga cgaaaggaac cggcgcgatc cgcgccttcg gcgagcacaa gggcagcggg
      601 ctcgctttga tgtgcgagat gctggccggc gccctcaccg ccggtggcac gtcgggcccg
      661 gtcgacaggc gcgagcgcat tgccaacggc atgctctcga tcttcatctc accgggtcac
      721 ttcggcacca aggcagagtt cgagcggacg ggccttgcct atgtcgaatg ggtctccggc
      781 tgccgcccga ttgatccggc tgccccggta aagctgcccg gcgagcccga agccgcgacg
      841 cgcacgatgc gtctcaagga gggcgtgcct ctgccgcagg acacgtgggc cagcattcgt
      901 gccaccgccg agcgcctggg cgtgaccatg gcgagctgac tcgtccggtt tcgcctcctt
      961 gccgctacgc ggccgcggtc aactcctgga aagtcctgag caggtggtgc acgtcgaccg
     1021 gcttctgcag aaagatcgag ttgacggcgg cccgggactg ggagtcgcgc tcgacgcccg
     1081 acatgtagat gatcgggcgc aggggatgcg tgaggctgaa ctcgctgccg acgacccagc
     1141 cgtcgactgc gccgctgagc cggatgtcgg tcagcagcca atcgacgtgt tcggcggggt
     1201 cgcggagaat ggaaagcgcc tgctcgccgg aatgtgcgga gacagcctcg cagcccgatt
     1261 tttgcacgac cctgacaatg agatcgtgca gattggcgtc atcctcgacg acgagaatac
     1321 gcgggacgct tgattgcggg gccatcatgc gaggtctgca ttggtgcgcg aacagacggc
     1381 ccggagcatc gcgctcctcg ccgccagctc gcaatcctgt gaccacacgt gactaggcgg
     1441 caaaagtaac gaagtcgttt ctgcgctcgt ctacaagggc ttatgggcaa atggcgccct
     1501 cgggatgtct gcgccgggcc gccccggggg gcgtcctggt gtattttggt tcaggttttt
     1561 gcgatgtcgg gacggagctc ggttaacgaa acctaaaccg gccgcacgcc gcctttgcca
     1621 tccggcgcag gcaggaacac gacgccggcc tcctccaaag tacgccggat gatgtccagc
     1681 tttcgcgtgt cccgcgtttc cggcagccca ccgtcctcct cgacgcgcct gatcgtcgag
     1741 cccgacaccc cggacgcctc ggcgagatcg cgaacggacc agcccacgat tgcgcgggcg
     1801 gcgcgcacct ggcagccgga aatgagctgc ggctgttcgt cgaagcccgc cgggcctggc
     1861 gcgtcactta cgtcgcgtgg cgtggggctg cgcagcggct cgcacatgcc gatccattcc
     1921 gccacggtgc ggtcccggcg cagcaccggc gcagcacgat accggaacca gcggtattcc
     1981 ccgctgtgat ggcgaagccg gtaatcgacg gcatgcgggc cctgcgtatc gatcagctgc
     2041 tgcatgacct cgcgcacgcg ctcccggtcg gcaggatgga cggcgttcag ccatccccag
     2101 ccctggacgt ctttgggcga ctggcccgtg aacgcgcgcc agtcctccat gtcgtcgctg
     2161 acctggcctg ttggatcgct cgtccagacg aagccgccgc cagtagcctg tccaagcgca
     2221 tgaagccggg cagtcatgtc gtccagctcc tcgcgtgctc gcctctggtc caggttggcc
     2281 tccttttcgc ttgtgatgtc gaaggtgacg ccgatcatcc gatcggggcg cttgtgcgcg
     2341 gtttgcagca cctcgccgcg cgcgtgcagc caacgggtcc gcccgcagcg ctcgatgaca
     2401 cgaaactcga cgtcgtagcg ttcacccagc tcgagcgtgc ggcgcagagc ctcgcgaagc
     2461 cgaatgctgt cctcagggtg aattcgattg aagaaatcct cgaccggtcc tgagccgaag
     2521 cccaggacct gcggcgcgtt ctgcgagcgg gtgatgtgtc ccgtgccgat atcgtaatcc
     2581 cacgtgatcg tgcgcgcggc ctccagcgcc aggcgcagac gattctcgtt gaccctgagg
     2641 ttctcctccg cctcacgcct cggcgtgatg tcctcgtcgg agccgatcca ttcgcggacc
     2701 gagccgtccg gattcttgag cggcacggcc ttcgtccgca cccagcgata gtcgccgcaa
     2761 cggtgccgga cccggtaggt gaactccacc ccgcagccga gcctcagcgc ctcgtgccaa
     2821 agcgcgctga tcgagcccgc atcgtcgggg tgcaccgcct tcagccaacc gtgctcggcg
     2881 aattcctcgt ccgactggcc cgtgaaggct gtccagaact tcgcctcgat gagctcgccg
     2941 gatgaatcgg cgcgccattc gccgagggcc ttgacggtcg cgagcgcccg gtaacgctct
     3001 tcgcgggcgg cgaggtcgag ctgcgcttcc cggatgtccg tgatatcgaa gagcgcgcct
     3061 gccgcccagc tcggcttgcc tgccgcattc gcgaacagct cgcccttgtt ggcgagccac
     3121 cggatctccc cgtccggcct caggatgcgg aactcgctgt taatggccgt ccccttggac
     3181 agcgccgcaa ttcgcgcggc ttcgctgtca acgcggtcgt cgggatgtac cttgctcatg
     3241 agcaggtcgt aggacgcggg cgcggagccc ggcgccaggc ccagcaggcg gtagaccccg
     3301 tccgaccagg tgaaagcgcc ggtggagaag tcccactccc aggtcccgac ctgcgggagg
     3361 gttggttttg cctgtctcgt gtcggcgctg ggggatagtt tctgcgcgcc ggcatctgcg
     3421 gcgcgcttaa cgaaacgatt cattgctcag cagcgaggtg ccctcgactg tccttcaaca
     3481 aggtaattct ctgaaaaatg tcttgtgcag gtgggtaatt tctgtgcgcg cgtcaagcaa
     3541 cgggctgaag ggacgggcag ccatgccgtc gcagggtgcc tcaggcgagc tgcattttca
     3601 catccgcgcc gcatgcgcta aggtgcgtga gcataatt
//
LOCUS       DATAIQ010001079         2465 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_76224, whole genome shotgun sequence.
ACCESSION   DATAIQ010001079 DATAIQ010000000
VERSION     DATAIQ010001079.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2465)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2465)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2465
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_76224"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            141..899
                     /locus_tag="VHN20_17790"
     CDS             141..899
                     /locus_tag="VHN20_17790"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007560638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HEX2727679.1"
                     /translation="MTGQSPPDSPIASRVVPSPNQGERRDHGPDMLILHYTGMPDERD
                     ALRRLCSPDSEVSAHYVVFENGEVVQLVPEARRAWHAGAGFWGGVTDINSCSIGIEIA
                     NPGHDGGLPPFPPQQIAAVIALAGDIVTRWSIRPQRVLAHSDVAPGRKQDPGERFPWQ
                     DLHRAGIGHWIAPAPISEGAVVGPGDRGTAVEEVQAMLAAYGYGAPTTGAFDSDTKMV
                     VAAFQRHFRPERVDGVADPSTVATLRALIASRPS"
     gene            995..>2465
                     /locus_tag="VHN20_17795"
     CDS             995..>2465
                     /locus_tag="VHN20_17795"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX2727680.1"
                     /translation="MRRVFLFGILLLALAGVIAGFVWNPTGGSAADVAYRVATVDRGL
                     ITASVRATGTLNPVTTVLVGSQLSGQIVEILADYNSPVKAGQVVARLYSEQIKARRDA
                     ARADLEQGHADVAMRRAQMDRTKATRQRAEAALQDMFAQRDRATAQLADARRNLERQQ
                     DLAGRGVGAQNALDTARTQTEVQKAALASSEAQIAAARAELSGLDADIALAAAQLKSA
                     EAAILQREAKLKDIEIDLERTDIRSPVDGVVVQRQIDLGQTVAASLNAPTLFTIAQDL
                     REIDIYANIDEADVGRLKAGQQVSFTVNAYPNRTFAGSVRMVRLGAQTIQNVVTYTAV
                     VGVDNRDMALLPGMTANLQVMTDERANTLRVPNAALRFRPAGAAPTPNLPLPSPTQAG
                     DGPRQGGGGRPLQDLRERLASEVRPTPEQSAAIERILAEARARAPGRQSGLSDEERRG
                     AMRQFRRDIEEKIAAALDPERRARYLALAKEGRQGATADE"
BASE COUNT          413 a          875 c          825 g          352 t
ORIGIN      
        1 tcctcgcggc tgacgggctc tgctatccgc gctaagccct tcccgatcac gatcgcgggc
       61 cgaggcattg cctcggcccg ttttgtttgg gcaaaagcgc tggtagacga gcgggacgag
      121 gatattcgct gattcaaagc atgaccgggc aatcgccacc cgacagcccc attgcgtcgc
      181 gcgtcgtccc ctcgcccaat caaggcgagc gccgcgatca tggcccggac atgctgatcc
      241 tgcattatac cggcatgcct gacgagcgcg acgccctgcg tcggctgtgc agccccgatt
      301 ccgaggtgtc ggcgcattac gtcgtcttcg agaacggcga ggtcgtccag cttgtgcccg
      361 aagcgcggcg cgcctggcat gcgggcgccg gcttctgggg cggcgtcacc gacatcaatt
      421 cctgttcgat cggcatcgag atcgccaacc caggccatga cggcggcctg ccgccgttcc
      481 cgccgcagca gatcgccgcc gtgatcgccc tggcgggcga catcgtcacg cgctggtcga
      541 tccggccgca acgcgtgctc gcccattccg acgtggcgcc cggccgcaaa caggatcccg
      601 gcgagcgctt cccgtggcag gacctgcacc gtgccggcat cggccactgg attgcaccgg
      661 ctcccatcag cgagggcgcc gttgtcgggc ccggcgaccg agggaccgcc gtggaggaag
      721 tgcaggcgat gcttgccgcc tacggctatg gagcgccgac gaccggggcc ttcgacagcg
      781 acaccaagat ggtggttgcg gctttccagc gccacttccg gcccgaacgc gtcgacggcg
      841 tcgccgatcc gtccaccgtg gcgacgttgc gcgcgctcat cgcatcgcgc ccaagctgag
      901 cgatgacgaa gagttaactc gcgtaaaacg cgcgaattgg cgaaaatggg gtgctaccac
      961 gatatcagtg ggaggcctca cgcgagagaa tcaggtgcgc cgcgttttcc tcttcggcat
     1021 tttgctgctg gcgctggccg gcgtcatcgc cgggttcgtc tggaacccga ccggcggcag
     1081 cgccgcggat gtcgcgtatc gcgtcgccac ggtcgatcgc ggattgatca ccgcgagcgt
     1141 gcgtgcgacc ggcaccctca atcccgtcac gaccgtgctc gtcggctcac aactgtcggg
     1201 acagatcgtc gagattctgg ccgactacaa cagcccggtg aaggccggcc aagtcgtcgc
     1261 gcgcctctac tcggaacaga tcaaggcgcg ccgcgacgcc gccagagccg atctcgagca
     1321 gggtcatgcc gacgtcgcca tgcgccgcgc ccagatggat cgcacgaaag cgaccaggca
     1381 gcgcgccgaa gccgcattgc aggacatgtt cgcgcagcgc gatcgcgcca cggcgcaatt
     1441 ggcggacgcc cggcgcaatc tcgagcggca gcaggacctc gccgggcgcg gcgtcggcgc
     1501 ccagaatgcc ctcgacacgg cgcgcacgca gaccgaggtc cagaaggcgg cgctcgcatc
     1561 gtcggaggcg cagatcgcgg ctgcacgggc cgagctcagc gggctcgacg ccgacatcgc
     1621 gctcgccgcc gcgcagttga agtccgccga ggccgctatc ctgcagcgcg aggccaagct
     1681 caaggacatc gagatcgatc tcgaacgcac cgacatccgc tcgccggtcg acggcgtcgt
     1741 cgtgcagcgg cagatcgatc tcggccagac ggtcgccgcc tctctcaacg cgccgacgct
     1801 gttcaccatc gcgcaggacc tgcgcgagat cgacatctac gccaacatcg acgaggccga
     1861 tgtaggccgc ctcaaagccg gccagcaggt gagcttcacc gtcaatgcct atcccaaccg
     1921 cacgtttgca ggcagcgtgc gcatggtgcg gctcggcgcc cagacgatcc agaatgtcgt
     1981 cacctatacg gcggtggtag gcgtcgacaa tcgcgacatg gcgctcctgc ccggcatgac
     2041 ggccaacctg caggtcatga ccgacgagcg cgcgaacacg ttgcgcgtgc cgaacgcggc
     2101 gctgcgcttc cggcctgcgg gcgcggcacc gacgccgaac cttcccctgc cctccccgac
     2161 gcaggccggc gacgggccca gacagggggg gggcggtcgg ccgttgcagg acctgcgcga
     2221 gcgcctcgcc agcgaagtgc gtcccacacc cgagcaatcg gccgccatcg agcgcatcct
     2281 ggcagaggcg cgcgcgcgcg cgccaggccg gcaatccggc ctgtccgacg aggagcggcg
     2341 cggcgccatg cgccagttcc gacgcgacat cgaggagaag atcgcggcgg cgctcgatcc
     2401 ggagcggcgc gcccgctacc tggcgctcgc caaggagggg cgtcagggcg cgacggccga
     2461 cgagg
//
LOCUS       DATAIQ010001080         2152 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_225025, whole genome shotgun sequence.
ACCESSION   DATAIQ010001080 DATAIQ010000000
VERSION     DATAIQ010001080.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2152)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2152)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2152
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_225025"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(130..1179)
                     /locus_tag="VHN20_17800"
     CDS             complement(130..1179)
                     /locus_tag="VHN20_17800"
                     /inference="COORDINATES: protein motif:HMM:NF012707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HEX2727681.1"
                     /translation="MAKRVTAILLACCLGLSAAAQDRPASVRPATTTPATTKPTAARP
                     AAAKPAADKAAAKHKAAKDKLAADKSVSDKPATDNAATDRAPTDNAAPDKLAGDKAAP
                     DKPVTDKAATEPAAAQPTLRIATEGACPPFNYLDAGTEPQGFEIELGKALCQEMAVTC
                     TFVVHEWDGIIRGLLAKDYDAIMASLAMTPRRKARIAFSKRYYFIPPAFIGPKDSDIR
                     DVSPAGLAGKRVGTTENSHHAAFLEARYPDADLRVYSKLDEANLDLLTGRIDLVLGDK
                     LALSRFLEAREGACCRFVADAPADPEFYGEGVGIGLRKEDKDLKERLNRGLERLIANG
                     TYDAIRAKYFAFDTK"
     gene            complement(1316..>2152)
                     /locus_tag="VHN20_17805"
     CDS             complement(1316..>2152)
                     /locus_tag="VHN20_17805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007756733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HEX2727682.1"
                     /translation="VLSVLRPHTMPPLPPEALLARGWPLVRRVLWGMVPSIVLIFLVL
                     GTIFMGLATPTEAGAMGAVGALALAAINRRLTWPLVRQGMASTMRITSMVVFILIGST
                     VFSLVFQGMDGGPWIEHMLTSLPGGQIGFLIFVNVFIFFLAFFLDFFEIAFIVIPLLA
                     PVAAKLGIDLIWFGVLLCVNMQTSFMHPPFGFALFYLRGIAPRAVKSSDIYWGAIPWV
                     AMQLILVLIVIFWPGSVTYWLGPRRVEDPAVIERKLQELQIPVPDGPGGLPPFDPGPP
                     GR"
BASE COUNT          378 a          693 c          730 g          351 t
ORIGIN      
        1 gccatcgcag acaccctttg ttcgtgagcg gtgccgcgct tctacagatg atcccgcgaa
       61 gtggaaaccg cttggccaaa aaagcgcgcc cggcggcgac ggcgccgccg gttcaagccg
      121 gccgcctgtt cacttggtgt cgaatgcgaa gtatttcgcc cggatggcgt cgtaggtgcc
      181 gttggcgatc agccgctcga ggccgcggtt gagcctctcc ttaaggtcct tgtcctcctt
      241 gcgcaggccg atcccgacgc cttcgccgta gaattccggg tcggccggcg cgtcggcgac
      301 gaagcggcag caggcgccct cgcgcgcctc gaggaaacgc gacagggcga gcttgtcccc
      361 gaggacgagg tcgatccgcc cggtcagaag atcgagattg gcttcgtcga gcttgctgta
      421 gacgcggagg tcggcgtcgg ggtagcgcgc ctcgaggaac gcggcgtggt ggctgttctc
      481 ggtcgtgccg acgcgcttgc cggcgaggcc ggccgggctg acgtcgcgga tgtcggaatc
      541 cttcggcccg atgaaggccg gcgggatgaa gtaatagcgc ttcgagaagg cgatgcgggc
      601 cttgcgccgc ggcgtcatcg ccagcgaggc catgatcgca tcatagtcct tggcgagcag
      661 gcctctgatg atgccgtccc attcgtggac cacgaatgtg caggtaacgg ccatctcctg
      721 gcacaaagcc ttgccaagct cgatctcgaa gccctgtggc tcggtgccgg catcgaggta
      781 gttgaagggc ggacaagcgc cttcggtggc gatcctgagc gtgggctggg cggctgcagg
      841 ctccgttgca gccttgtccg tgacgggctt gtccggcgct gccttgtcgc ccgcgagctt
      901 gtcgggcgcc gcgttatccg tcggggccct gtccgtcgcc gcgttgtccg tcgccggctt
      961 gtcggacacc gacttatctg cagcaagctt gtctttcgcc gccttgtgct tcgctgctgc
     1021 cttgtcggcc gcgggcttgg ccgccgccgg tctcgccgcc gtgggcttcg tcgtcgcggg
     1081 cgtggtcgtc gcgggcctga ccgaagccgg cctgtcctgc gccgcagccg acaagccgag
     1141 gcagcacgcc agcaaaatgg ccgtgacacg ttttgccatg gacccaggca cccaccctcg
     1201 tgacgctccc gccgcaggaa gtctttttcg gaaaatcctc aaaatcgcga aaacttgcaa
     1261 cgccaaacca acgtccgatg ccgcgctgaa acttcgcacg cacggccgaa gcttgctacc
     1321 ggcctggcgg gcccgggtcg aagggcggaa gcccgcccgg cccgtcggga accggaattt
     1381 gcagctcctg cagcttgcgc tcgatcacgg ccggatcctc gacgcgtcgc ggtccaagcc
     1441 agtatgtcac ggagcctggc caaaagatca cgatcagcac gaggatcagt tgcatcgcga
     1501 cccacgggat cgcgccccag tagatgtcgg agctcttcac cgccctcggg gcgatgccgc
     1561 gcaggtagaa cagggcgaag ccgaacggcg ggtgcatgaa gctcgtctgc atgttcacgc
     1621 agagcagcac gccgaaccag atcaggtcga tgccgagctt ggcggccacc ggcgccagca
     1681 gcgggatcac gatgaaggcg atctcgaaga aatcgaggaa gaaggcgagg aagaaaatga
     1741 agacgttgac gaagatcagg aatccgatct gaccgccggg caggctcgtc agcatgtgct
     1801 cgatccaggg tccgccgtcc atgccttgga agacgaggct gaacacggtc gagccgatca
     1861 ggatgaacac gaccatcgac gtgatgcgca tggtcgacgc catgccctga cggaccagcg
     1921 gccaggtgag ccggcggttg atcgctgcca gcgccagcgc gccgaccgcg cccatggcgc
     1981 cggcctcggt cggcgtcgca aggcccatga aaatcgtgcc gagcaccagg aagatcagca
     2041 cgatcgacgg gaccatgccc cacaggacgc ggcgcaccag cggccagccg cgggcgagca
     2101 atgcttccgg cggcaagggc ggcatggtgt gcgggcgcaa gaccgaaagg ac
//
LOCUS       DATAIQ010001081         4166 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_269378, whole genome shotgun sequence.
ACCESSION   DATAIQ010001081 DATAIQ010000000
VERSION     DATAIQ010001081.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4166)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4166)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4166
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_269378"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(641..1126)
                     /locus_tag="VHN20_17810"
     CDS             complement(641..1126)
                     /locus_tag="VHN20_17810"
                     /EC_number="2.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008964506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0018104 - peptidoglycan-protein
                     cross-linking [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HEX2727683.1"
                     /translation="MVVAACLIAGATGAATAREVVGFNAGADPGTIVVRTAQRRLYLV
                     VDRGMAIRYQVAVGKQGKQWYGRVVVDGKHLRPAWVPPPDVRKDNPKLPDIIPGGDPS
                     NPMGAAAITLSGDKYAIHGTNRPDSIGRRVSYGCFRMRNEDVTDLYQRVSVGATVVVE
                     R"
     gene            1348..1821
                     /locus_tag="VHN20_17815"
     CDS             1348..1821
                     /locus_tag="VHN20_17815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018044553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CAP domain-containing protein"
                     /protein_id="HEX2727684.1"
                     /translation="MRSRLLAVCLGSWLLAGCAGPEPLTTASTGLVASVSEARAAAAI
                     ISQYRAVHGLGGVSVDARLNRAAEHQARAVAATGVLSHGEFASRMAAYGISGYRAENL
                     AAGSNSVAEVIARWKASPGHNQNMLLPQVTRMGLARVDSPGKGYGRYWALVLASR"
     gene            complement(1873..2691)
                     /locus_tag="VHN20_17820"
     CDS             complement(1873..2691)
                     /locus_tag="VHN20_17820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018646060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727685.1"
                     /translation="MVNVLVRSLALLAVSLPLAGVADAQTKPKVAEIGVAPKSYLFVG
                     NSFYYYNNSMHSVFLNFVRAADKANAGQYRATSATISGSGLNWHDLDAYLKPGSGMAS
                     YSFTPDNEVVFNTFDKPFDVVIMNDCSQCPVHPKLVGLFHEYAMKHSDTARQRGATPV
                     LFMTWAYADKPEMTQQLAEQYTKAGNDNNALVVPAGLAFAKALGRKPDLVLYAADKRH
                     PSAAGTYLGAATLYAAIARKSPEGSPVTMPGVDADTAKLLQSVAWETVQEYYAP"
     gene            2940..3896
                     /locus_tag="VHN20_17825"
     CDS             2940..3896
                     /locus_tag="VHN20_17825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020093911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HEX2727686.1"
                     /translation="MHNHHDHGARHHAHAGHDHHGLHHVHAPATFGRAFAIGIGLNLG
                     FTAVEAIFGVFSNSVALLADAGHNLSDVLGLVVAWAATTLARRPPTPRYTYGLGASSI
                     LAALFNAVFLMVAVGAIGWEAIQRFAAPKPVAGNTVIAVAAIGILINGVTAWLFASGR
                     KADVNIRGAFLHMVADAAVSAGVVIAGVAISYTGWMWLDPLVSLVIVAVIVWGTWDLL
                     RQALAMSLGAVPAAIDPAAVRIWLAGRSGVTAVHDLHIWSMSTSDCALTAHLVMPGGH
                     PGDVFLMATAAGLQQRFGISHVTVQIETDPRAACPLEPDHVV"
     gene            3942..>4166
                     /locus_tag="VHN20_17830"
     CDS             3942..>4166
                     /locus_tag="VHN20_17830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727687.1"
                     /translation="MRELAPVTYLLFVVYVVNALMLSAVAAKQAGRRLRLLDGGEPLQ
                     RLTGWTFGVAFAAALVWLPLRMWTGGLAGNP"
BASE COUNT          608 a         1367 c         1451 g          740 t
ORIGIN      
        1 tgcgactttc gtcatgccgg tatacaagag gtatcggcca atattacccg atctgttcat
       61 ggttgcttaa tctacaaggt tacctcctac ggtgaatcca gggctctacg atggagaatc
      121 catggattaa ctattggcta cattaggacc tagtggcggg atattaacca cgtattttgg
      181 ggtgcagggc ctgggcggac agcgttttgg gcagcgatct ggacttgcgg cggcgtgcca
      241 gggcgaggcg agaaaggcat gaatcggcgg gtcagcgacc tggacgcgag gcctggggtg
      301 caactgcgcg cggatgcagt tctcgccgct attgcggcct gatctcggct gctccggcgc
      361 aggatcgggg cgcactcgcg aggcctgccg cggcgacgca attgcggggt gccgttcgtt
      421 aacggcagct cgggccgggg gcgattcgcc tccgcgttgg cctcgaggcc ggcggccgct
      481 gccgcacggc ttctgacagt ctgtccccgg gcacgggggc tcccgccggg ggcgacccgg
      541 cggatcgcgc tttccaggac agcctcgtcc cgggtctagc cggggatcat ccggccccag
      601 ggatatgggg ccggatcgat tcaagctgag atgatgccgc tcagcgctcg acgacgaccg
      661 tcgcgccgac gctgacgcgc tggtagaggt cggtgacgtc ctcgttgcgc atgcggaagc
      721 agccatagga gacgcgccgg ccgatcgagt cgggccggtt tgtgccatgg atggcgtatt
      781 tgtcgccgga cagggtgatg gcggcggcgc ccatggggtt gctcggatcg ccgcccggga
      841 tgatgtccgg cagcttggga ttgtccttcc gcacgtccgg gggcggcacc caggcgggcc
      901 tcaggtgctt gccgtcgact acgacgcggc cgtaccattg cttgccctgc ttgccgaccg
      961 ccacctggta gcggatcgcc atgccgcgat cgaccacgag ataaagccgg cgctgcgcgg
     1021 tgcgcacgac gatcgtgccg gggtcggcgc cggcgttgaa accgaccacc tcgcgcgccg
     1081 tggcggcgcc cgtggcgccg gcaatcaggc atgcggcgac gaccatgcgc ccggtctctt
     1141 tcgcgactct cacggctgca gggcgatacg cgaacatttg cttggctccc ccttacgcat
     1201 cgacgcgtgt tcgatcgcag cgatactgct acgcttgccc cgcccgtcag cgtgcggtgg
     1261 cgcacctgtc attaccggtc tcgggcaacc gaattcttaa ccggggcggg ccatgatcga
     1321 tgaagatcac cagagcctta acgactcatg cgctcgcgcc tgctcgccgt ctgtctcggc
     1381 tcgtggctgc tggccggctg cgccgggccg gagcccctca cgacggcctc aacgggtctc
     1441 gttgcaagcg tctcggaggc gcgggccgcg gcggcgatca tctcgcaata ccgcgcagtc
     1501 catggcctcg gcggcgtgag cgtggacgcg cggctgaacc gcgccgcgga gcaccaggcc
     1561 cgcgccgtcg ccgccaccgg cgtgctttcg catggcgagt tcgcgagccg catggcggcc
     1621 tacggaatca gcggctaccg ggccgagaat ctcgccgccg gatcgaatag cgtcgccgaa
     1681 gtcatcgcgc gctggaaggc ctcgcccggc cataaccaga acatgctcct gccgcaggtc
     1741 acgcggatgg ggctggcgcg cgtcgattcc cccggcaagg gttacgggcg ctactgggcg
     1801 ctcgtgctcg cgagccggta gcgctgtcac tctctcccga ggccctggcg cgagaagatg
     1861 agcccagggc gcttacggcg cgtaatattc ctggacggtc tcccaggcca cagattgcag
     1921 cagcttcgcg gtgtcggcgt cgacgcccgg catcgtgacc gggctgcctt cgggcgactt
     1981 gcgggcgatg gcggcgtaga gggtggcggc gccaagatag gttccggccg cgctcggatg
     2041 gcgtttgtcg gcggcgtaaa gcacgaggtc gggcttgcgc ccgagcgcct tggcgaaggc
     2101 gaggccggcc ggcacgacga gcgcgttgtt gtcgttgccg gccttcgtat actgctcggc
     2161 gagctgctgc gtcatctccg gcttgtctgc gtaggcccag gtcatgaaca gaaccggcgt
     2221 ggcgccgcgc tggcgcgccg tgtcgctgtg cttcatggcg tattcgtgga acaggccgac
     2281 gagcttcgga tgcaccgggc actggctgca gtcgttcatg atgaccacgt cgaacggctt
     2341 gtcgaaggtg ttgaagacga cctcgttgtc gggcgtgaag gaatacgagg ccatgccgct
     2401 gcccggctta agataagcat cgaggtcgtg ccagttgagc ccggatccgg agatggtcgc
     2461 cgacgtggcc cgatactgcc cggcattggc cttgtccgcc gcgcgcacga agttcaggaa
     2521 aaccgaatgc atggagttgt tgtagtagta gaagctgttg ccgacgaaca ggtagctctt
     2581 gggcgcgacg ccgatctcgg cgactttcgg cttcgtctga gcgtccgcga cgccggcgag
     2641 cggcagcgat acggcgagca gcgcgagcga gcggacgagc acattgacca ttgcttcctc
     2701 cttgggaccg gagcggcgga cgcttccccg gccagcatgg accgatggca ccctgcgcac
     2761 aatgccgccg tgaccatcgc gcggccggcg cgcatgcttt cccgctcgtc gtcgtggcaa
     2821 agccgacgcc gcccacctac ctgcgtgaca gccgcggctg cgctggtgcg caccggtcga
     2881 tgcggcgcgg cccggatggt cacagcctga agcggagaag agagagagag agaccgccga
     2941 tgcacaacca ccatgatcat ggcgcgcgcc atcacgcgca tgcgggccac gatcatcatg
     3001 gccttcacca cgtccatgcg ccggcgacct tcgggcgcgc ctttgcgatc ggaatcggcc
     3061 tcaacctcgg attcaccgcc gtcgaggcga tcttcggcgt gttcagcaac tccgtcgcgc
     3121 ttctcgccga cgccggccat aatctgagcg acgtgctcgg ccttgtggtg gcgtgggccg
     3181 ccaccacgct ggcgcggcgt ccgccgacgc cccgctacac ctatggtctc ggcgcatcgt
     3241 cgatccttgc ggcattgttc aacgcggtgt tcctgatggt cgcggtcggc gcgatcgggt
     3301 gggaggccat ccagcgcttt gctgcgccga aacccgtcgc cggcaacacc gtcatcgcag
     3361 tcgccgcgat cggcatcctg atcaacggcg tgacggcctg gctgttcgcg tcaggacgca
     3421 aggccgacgt caacatccgc ggcgccttcc tgcacatggt cgccgacgcg gccgtgtccg
     3481 ccggggtcgt gatcgccggc gtggcgattt cgtacacggg ttggatgtgg ctcgacccgc
     3541 tcgtgagcct cgtcatcgtg gcggtgatcg tgtggggcac gtgggacctg ctgcggcagg
     3601 cgctggccat gtcgcttggc gccgtgccag ccgccatcga cccggcggcg gtgcgcatct
     3661 ggctcgcggg caggtccggc gtcaccgccg tccacgatct gcacatctgg tcgatgagca
     3721 ccagcgactg cgccctgacc gcgcatctcg tgatgccggg cggccatccc ggcgatgttt
     3781 tcctgatggc cacggcggcg ggcctgcagc agcgcttcgg catcagccac gtcaccgtgc
     3841 agatcgagac cgatccgcgc gcggcgtgtc cgctcgagcc ggatcacgtg gtgtgaccag
     3901 ggccttggac ggcaacggcg tgatgtgcga cgcgcttccc catgcgtgag cttgcccccg
     3961 tcacctatct gctgttcgtc gtctacgtgg tgaacgccct gatgctgtcc gccgtcgcgg
     4021 ccaagcaggc cgggcggcgg ctgcggctgc tcgacggcgg cgagccgctg cagcgtctga
     4081 ccggctggac gttcggcgtg gcgttcgccg cggcgctcgt gtggctgccg ctgcgcatgt
     4141 ggaccggagg ccttgccggc aaccct
//
LOCUS       DATAIQ010001082         2077 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_225121, whole genome shotgun sequence.
ACCESSION   DATAIQ010001082 DATAIQ010000000
VERSION     DATAIQ010001082.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2077)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2077)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2077
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_225121"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1202
                     /locus_tag="VHN20_17835"
     CDS             <1..1202
                     /locus_tag="VHN20_17835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HEX2727688.1"
                     /translation="IFITYGEHDLADNIIHLVLARTPDAPPGTRGISLFLVPKFLPVG
                     TRNDVRCHSIEHKMGIHGSPTCTMVYGDQGGAVGWLVGEENRGLACMFTMMNNARLAV
                     GLQGVAVAERATQQALAYARERRQGRAGAAGDGMSPIIAHPDVQRMLMTMKALTAAAR
                     AICYMTAEAIDRADRAGDGAARKAAHERASLLTPVAKAFSTDIGTEVASLGVQVHGGM
                     GFIEETGAAQHYRDARIAAIYEGTNGIQAIDLVTRKLPLAGSETVRREIAAMRVTVQK
                     LIKDSSPAFGATAARLRDAITSLDRATSFMLKALAGNAPDEALAGATPYLRLFALAQG
                     GAALAELGLAASAAMQAGDSDPAHPARIALCRFFAENVATAARGLEDSINSGAGFVQD
                     APIALVS"
     gene            1211..2038
                     /locus_tag="VHN20_17840"
     CDS             1211..2038
                     /locus_tag="VHN20_17840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015929464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX2727689.1"
                     /translation="MSLRGKTIFVTGASRGIGLAIALRAACDGANVAVAAKTTEPHAK
                     LPGTIHTAAAEIERAGGKALPLAVDVRDEAAVKDAIERTVATFGGLDVVVNNASAISL
                     TATAQTEMKRFDLMHQVNTRGTFMVSKYAIPHLEKAENPHILMLAPPPDMREEWFAPH
                     LAYSLAKFGMSLCVLGFAGELRPKGIAVNALWPRTTIATAAVNNLLGGEELARASRTP
                     EIVADAAYLVFNKPARSFSGNFLIDETFLAGEGVTDLERYQVDPSRPLMTDLFVRRD"
BASE COUNT          335 a          749 c          691 g          302 t
ORIGIN      
        1 agatcttcat cacctacggc gagcacgacc tggccgacaa catcatccac ctcgtgctgg
       61 cgcggacccc tgacgccccg ccgggcacgc gcggcatctc gctgttcctg gtgccgaaat
      121 ttctgcccgt cggcacgcgc aacgacgtgc gctgccattc catcgagcac aagatgggca
      181 tccacggctc gccgacctgc acgatggtct acggcgacca gggcggcgcc gtcggctggc
      241 tggtcggcga ggagaatcgc ggcctcgcct gcatgttcac gatgatgaac aacgcgcgcc
      301 ttgccgtcgg cctgcagggc gtggccgtgg ccgagcgcgc gacgcagcag gcgctcgcct
      361 acgccaggga gcggcggcag ggccgcgccg gcgccgccgg cgacggcatg agcccaatca
      421 tcgcgcatcc cgacgtgcag cgcatgctga tgaccatgaa ggcgctcacg gcggcggcgc
      481 gcgccatctg ctacatgacg gccgaggcga tcgatcgcgc cgaccgcgcc ggcgacgggg
      541 cggcgcgcaa ggccgcgcac gaacgcgcct cgctcctgac gccggtcgcc aaggccttct
      601 cgaccgacat cggcaccgag gtcgcctcgc tcggcgtgca ggtgcatggc ggcatgggct
      661 tcatcgagga gaccggcgct gcccagcatt atcgcgatgc ccgtattgcc gccatttatg
      721 aaggcaccaa cggcatccag gcgatcgacc tcgtcacgcg caagctgccg ctcgccggca
      781 gcgagaccgt gcgccgggag atcgccgcca tgcgcgtcac cgtgcagaag ctgatcaagg
      841 attcatcgcc cgccttcggc gccacggcgg cgcgcttgcg cgacgcgatc acgagcctcg
      901 accgcgccac gagcttcatg ctgaaggcgc tcgccggcaa tgcgccggac gaagcgctcg
      961 ccggggcgac gccttacctg cgcctgttcg cgttggcgca gggcggcgcg gcgctggccg
     1021 agctcggcct cgccgccagc gcggcgatgc aggccggcga cagcgatccg gcgcacccgg
     1081 cgcgcatcgc cctgtgccgc ttcttcgccg agaacgtcgc cacggcggca cgcgggctcg
     1141 aggactcgat caattccggc gccggcttcg tgcaggatgc gccgattgcc ctcgtgagct
     1201 gacggccgac atgtcccttc gcggcaaaac catcttcgtc accggcgcct cgcgcggcat
     1261 cgggctggcg atcgccctgc gcgccgcgtg tgacggcgcc aacgtcgccg tcgcggcgaa
     1321 gacgacggag ccgcatgcga agctgcccgg caccattcac accgccgccg cagagatcga
     1381 gcgcgccggc ggcaaggccc tgccgctcgc ggtcgacgtg cgcgacgaag cggcggtgaa
     1441 ggacgcgatc gagcgtaccg tcgcgacctt cggcgggctc gacgtcgtcg tcaacaatgc
     1501 cagcgccatc agcctgacgg cgacggcgca gaccgagatg aagcgcttcg acctgatgca
     1561 ccaggtcaac acgcgcggca ccttcatggt ctcgaaatac gccatcccgc atctcgagaa
     1621 ggccgagaac ccgcacatcc tcatgctggc gccaccgccg gacatgcgcg aggaatggtt
     1681 cgcgccgcac ctcgcctatt cgctcgccaa gttcggcatg agtctttgtg tgctcgggtt
     1741 tgcgggggag ctgcggccga agggcatcgc ggtcaacgca ctgtggccgc gcacgacgat
     1801 cgccacggcc gcggtcaaca acctgctcgg cggcgaagag ctggcgcggg cgagccgcac
     1861 gccggagatc gtcgccgacg ccgcctacct agtgttcaac aagccggcac gcagcttttc
     1921 cggcaatttc ctgatcgacg agacttttct ggccggcgaa ggcgtcaccg atctcgagcg
     1981 ctaccaggtc gacccgtcgc gtccgctgat gacggacctg ttcgtgcggc gcgactaggg
     2041 cgggatcaat tcagattgaa tcgatcccgc cctcttt
//
LOCUS       DATAIQ010001083         1699 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_225348, whole genome shotgun sequence.
ACCESSION   DATAIQ010001083 DATAIQ010000000
VERSION     DATAIQ010001083.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1699)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1699)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1699
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_225348"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..466
                     /locus_tag="VHN20_17845"
     CDS             <1..466
                     /locus_tag="VHN20_17845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003497577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727690.1"
                     /translation="QHRDAETQAGATGQGVVKGGQSFWLLGLGDQLALLRSGDKRRIE
                     GVDDLPGTLARLADGAPAILLAHEPDIFPKVPARVALTLSGHTHGGQVRLFGYSPIVP
                     SRYGNRYAYGHVVEDGRNLIVSGGLGTSILPVRFGVPPEVVLVELGSDAVVT"
     gene            complement(688..1272)
                     /locus_tag="VHN20_17850"
     CDS             complement(688..1272)
                     /locus_tag="VHN20_17850"
                     /EC_number="2.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0018104 - peptidoglycan-protein
                     cross-linking [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HEX2727691.1"
                     /translation="MRLRLLPILVAAAVPLAGCFQATPDPALSTRDTSFMANMMPTDP
                     DPQFGRYLTDDPTGEKPGTIVVETRQRLLYLVLPNRKAMRYGVSVGEEAFGWSGVAHV
                     ARKAEWPDWNPPAEMKRRWPHVHYVSGGPANPLGARALYLFQGNRDTLYRIHGTNEPE
                     KIGAAVSSGCIRMHNIDVIDLYNRVPVGATVIVR"
     gene            1469..>1699
                     /locus_tag="VHN20_17855"
     CDS             1469..>1699
                     /locus_tag="VHN20_17855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018262825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone deacetylase family protein"
                     /protein_id="HEX2727692.1"
                     /translation="MSTLYLHHSAALDHQTPLGHPERPDRIRAIERALEHERFAGLVR
                     EAAPRASVDEITLAHPEDYVRAIAEAAPREGLV"
BASE COUNT          264 a          584 c          594 g          257 t
ORIGIN      
        1 acagcatcgc gatgccgaga cccaggccgg cgccaccggt cagggtgtcg tcaagggcgg
       61 gcaatccttc tggctgctcg gcctcggtga ccagctcgcc cttctgcgca gcggcgacaa
      121 gcgccggatc gagggcgtcg acgacctccc cggcaccctg gccaggctgg ccgatggggc
      181 gccggcgatc ctgctggcgc atgagcccga cattttcccg aaagtgccgg cgcgcgtcgc
      241 gctgaccctg tccggccaca cccacggcgg gcaggtgcgg ctgttcggct actcgccgat
      301 cgtgccctcg cgctacggca accgctacgc ctatggccat gtggtcgagg atggccgcaa
      361 cctgatcgta tcgggcggcc tcggcaccag catcctgccg gtgcgcttcg gcgtgccgcc
      421 cgaggtcgtg ctggtcgaac tcggcagcga cgcggtggtc acctgatgat caccgtcgcg
      481 gcgaccggga tgcgactgca gagacgatcg tcgatgttcg gcagcgacgc ggtggttacc
      541 tgacgatcac cgtcgcggcg accgggatgc gtcggcagag acgatcgtcg aactcggcag
      601 cgacgcggtg ttacctgacg atcaccgtcg ccccgaccgg gacgcgactg cagagacgat
      661 cgtcgatgct cggcagcgac gcggcggtta cctgacgatc acagtcgcgc cgacggggac
      721 gcgattgtag agatcgatca cgtcgatgtt gtgcatcctg atgcatcccg acgagaccgc
      781 cgcgccgatc ttctcgggct cgttggtgcc gtggatgcgg tagagcgtgt cgcggttgcc
      841 ctggaacaga tagagggcgc gcgcgccgag cggattggcg gggccgccgc tcacgtaatg
      901 cacgtgcggc cagcgccgct tcatctccgc gggcgggttc cagtcgggcc actcggcctt
      961 gcgggccacg tgcgcgacgc cgctccaccc gaacgcctcc tcgccgaccg agaccccgta
     1021 gcgcatcgcc ttgcggttcg gcagcacgag gtagaggagg cgctggcgcg tctcgaccac
     1081 gatggtcccg ggcttctcgc cggtgggatc gtcggtcagg tagcggccga actggggatc
     1141 cgggtccgtc ggcatcatgt tggccatgaa gctcgtgtcg cgcgtcgaca gcgccggatc
     1201 aggcgtggcc tgaaagcagc cggccagcgg cacggccgcc gcaacaagga tcggcaatag
     1261 acgtaatcgc atttgcgccc ccgtggcggc gtcaccgtta ctcgacgatc gtcacgcccg
     1321 gaccctgata cgaaaggtgt aggcgaccgt cgccggggcc gcaacgcggc gtgcgcaaca
     1381 tccggccgcc tgttgcagcc agggcacatg gggcgcacat ggacagggcg cgcccgggct
     1441 gcgagattgc ccggcaaaag agagcctcat gtcgaccctt tacctgcacc attcggccgc
     1501 cctggaccat cagacgccgc tcggccatcc cgagcgtccc gaccgcatcc gcgccatcga
     1561 gcgggccctc gagcacgagc gcttcgcggg gctggtgcgc gaggcggcgc cacgggcgag
     1621 cgtggacgag atcacgctcg cccatccgga agattacgtg cgcgccatcg ccgaggcagc
     1681 gccgcgcgaa ggcctggtg
//
LOCUS       DATAIQ010001084         5886 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_225500, whole genome shotgun sequence.
ACCESSION   DATAIQ010001084 DATAIQ010000000
VERSION     DATAIQ010001084.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 5886)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5886)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5886
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_225500"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2110)
                     /gene="leuS"
                     /locus_tag="VHN20_17860"
     CDS             complement(<1..2110)
                     /gene="leuS"
                     /locus_tag="VHN20_17860"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011313428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004823 - leucine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006429 - leucyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HEX2727693.1"
                     /translation="MTSERYNAKEAEPKWQTAWSERDIFRTRNDDPRPKYYVLEMFPY
                     PSGRIHMGHVRNYTMGDVVARYKRAKGLNVLHPMGWDAFGMPAENAAMERKVHPKDWT
                     YANIDTMRGQLKSMGLSLDWSREIATCDPGYYRHQQRMFLDFLEAGLVDRKTAKVNWD
                     PVDQTVLANEQVIDGRGWRSGAPVEQRELTQWFFKITDFAQDLVDKLDTLERWPEKVR
                     LMQKNWIGRSEGLLIRFALDPATAPRGESELEIYTTRPDTLFGACFMAIAPDHPLAAA
                     AAAKDERLAEFIAECRRMGTAEETIERAEKLGYDTGIRVAHPFDPSWKLPVYVANFIL
                     MDYGTGAIFGCPAHDQRDLDFVRKYGLGVTPVVCPPGVDPAAFTITDTAYEGDGFMIN
                     SRFLDGMTSDEAREEVARRLERETRNNRPVGARKVNFRLRDWGISRQRYWGCPIPVIH
                     CSDCGVVPVPPGQLPVTLPEDVSFDVPGNPLDRHPTWKHVDCPRCGKAARRETDTMDT
                     FVDSSWYFARFSAPWAETPTDRAAVDGWLPVDQYIGGIEHAILHLLYSRFFTRAMNAT
                     GHAGVKDGEPFAGLFTQGMVVHETYRSRDGAWLMPSEVRIDSEGGDRRAVRIDTGDPV
                     EIGSIEKMSKSKKNTVDPDDIIASFGADTARWFMLSDSPPERDVIWTEEGAQGAARFV
                     QRVWRLVGEIAAEAAHANGVE"
     gene            2245..2919
                     /locus_tag="VHN20_17865"
     CDS             2245..2919
                     /locus_tag="VHN20_17865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015927727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HEX2727694.1"
                     /translation="MRDPQESVARLQAVQAAVARAARDFDREPASVTLIAISKTFAAE
                     AIEPVLAAGQRVFGENYVQEAKAKWTALRERYSGTELHMVGPLQSNKARDAVALFDVI
                     HTLDRASLAEALAKEMARQGRRPRLLVQVNTGEEPQKGGLIPGEADAFIAACRERWGL
                     PVEGLMCIPPADEPPSPHFALLSKIAVRNGLQTLSMGMSADFEAAIQLGATHVRIGTA
                     IFGERA"
     gene            3102..3581
                     /locus_tag="VHN20_17870"
     CDS             3102..3581
                     /locus_tag="VHN20_17870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727695.1"
                     /translation="MIRGSLYFFSRRVLKTRHISEGDVRTLERVIFSDGVTSRKEVEV
                     LLHLARRVPAADPAWADFLVKAVVDFVVWGARPTGYVDPDTARWLIGIFGRRGPSKLT
                     RRVAREIMREAEHVDVRLAEFAQGRIRFFLRTCLAWLTAPRRAQAKFNQPNWAAAAA"
     gene            complement(3716..4249)
                     /locus_tag="VHN20_17875"
     CDS             complement(3716..4249)
                     /locus_tag="VHN20_17875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HEX2727696.1"
                     /translation="MKRSTFDTIRVFRSPLDHRRGRLVAGPLVIPCSLGRAGTRRDKR
                     EGDGATPLGRFRVLGCFYRADKGLRPRTRLPLAAIRPGDGWCDDPRDRRYNQPVPLPY
                     PAGHERMWRDDHLYDIVVDIGCNRGPIVRGRGSAIFMHLAQPGLAPTEGCVAVSPAVM
                     RRLLARIGPQTRVHVVS"
     gene            4350..5036
                     /locus_tag="VHN20_17880"
     CDS             4350..5036
                     /locus_tag="VHN20_17880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012453574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX2727697.1"
                     /translation="MSNACQLLVVDDDQDLRDTLAEQLRLYDEFDVLTAGTAAESAEL
                     ARGERIDLVIMDVGLPDMDGREAVRQMRRNGFRGPIIMLTAQGSDADTVLGLDAGAND
                     YVTKPFKFAVLLARIRAQLRQHEASEDAIFRIGPYTFRPGAKLLVNEKGSKLKLTEKE
                     TAILRYLYRAGQKVVSRDTLLSEVWGYNANVTTHTLETHIYRLRQKIENNPSSARLLV
                     TEPGGYKLMP"
     gene            5055..5513
                     /locus_tag="VHN20_17885"
     CDS             5055..5513
                     /locus_tag="VHN20_17885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEX2727698.1"
                     /translation="MALDGDITILTKAPFFGLLEPEAVRLLAFASETRNLRRDEVLFE
                     KGDRSDGAYIVIRGALALDGGDEKAQPFIAEPGALVGHMALFLRTPRPATATACDDTT
                     VMRISPTLLRRVLEEFPRSAGTLYQALSEDLAGLTEGLERVRRRLETVNA"
     gene            complement(5547..>5886)
                     /locus_tag="VHN20_17890"
     CDS             complement(5547..>5886)
                     /locus_tag="VHN20_17890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012255182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HEX2727699.1"
                     /translation="NVAPLEHDVWSHKQLLGVVSHTPVETEALETLRQEAGWIDAARH
                     LTPEPRKIYTWWSYRSPDWRAADKGRRLDHIWISPDLAGTLRGVDVARQTRGWIRPSD
                     HVPVTATLEL"
BASE COUNT          949 a         1943 c         2016 g          978 t
ORIGIN      
        1 gctcgacgcc gttcgcatgc gcggcttccg cggcgatctc gccgacgaga cgccagacgc
       61 gctgcacgaa gcgggcggcg ccttgcgcgc cctcttcggt ccaaatcacg tcccgctcag
      121 ggggcgaatc cgagagcatg aaccagcgcg cggtgtcggc gccgaaggac gcgatgatgt
      181 cgtccgggtc gaccgtgttt ttcttcgact tggacatctt ctcgatcgag ccgatctcga
      241 ccgggtcgcc ggtgtcgatg cgcacggcgc ggcggtcgcc gccctcgctg tcgatgcgca
      301 cctcgctcgg catcagccag gcgccgtcgc ggctgcggta ggtctcgtgc acgaccatgc
      361 cctgcgtgaa caggccggcg aacggctcgc catccttcac gccggcatgg ccggtcgcgt
      421 tcatggcgcg ggtgaagaag cgcgagtaga ggagatgcag gatcgcgtgc tcgatgccgc
      481 cgatatactg gtccaccggc agccagccgt cgacggcggc gcggtcggtg ggcgtctcgg
      541 cccacggtgc gctgaagcgc gcgaaatacc acgacgaatc cacgaaggtg tccatcgtgt
      601 cggtttcgcg ccgggccgcc ttgccgcaac gcgggcaatc gacgtgcttc caggtgggat
      661 gacggtcgag cggattgccc ggcacgtcga acgacacgtc ctccggcaag gtgaccggca
      721 gctgccccgg gggcaccggc acgacaccgc agtcgctgca atggatcacc gggatagggc
      781 aaccccagta gcgctggcgc gagatgcccc agtcgcgcag ccggaaattg accttgcgcg
      841 cgccgaccgg gcggttgttg cgcgtctcac gctcgagccg ccgggcaacc tcctcccgcg
      901 cttcgtcgga cgtcatgccg tcaaggaagc gcgaattgat catgaagccg tcgccttcgt
      961 aggcggtgtc cgtgatcgta aacgcggccg gatcaacgcc aggcgggcag acaacgggcg
     1021 tcacgccgag gccgtatttc ctgacgaagt cgagatcgcg ctggtcgtgc gccggacagc
     1081 cgaagatggc ccccgtgccg tagtccatga ggatgaagtt ggccacgtag acgggcagct
     1141 tccagctcgg atcgaacggg tgggcgaccc ggatgcccgt gtcatagcca agcttctcgg
     1201 cccgctcgat cgtctcctcg gccgtgccca tgcgccggca ctcggcgatg aactcggcga
     1261 gcctctcgtc cttggcggcc gccgcggccg ccagagggtg gtccggcgcg atcgccatga
     1321 aacaggcgcc gaacaacgtg tccgggcggg tcgtgtagat ttcgagctcg ctctcgccgc
     1381 gcggggcggt cgccgggtcg agcgcgaagc ggatcagcag cccttccgag cgcccgatcc
     1441 agttcttctg catcagacgg actttttcgg gccagcgctc gagggtgtcg agcttgtcga
     1501 ccagatcctg ggcgaagtcc gtgatcttga agaaccactg cgtcagctcg cgctgctcga
     1561 cgggcgcccc ggagcgccag ccgcggccgt cgatgacctg ctcgttggcg agcacggtct
     1621 gatcgacggg gtcccagttg accttggcgg tcttgcggtc gacgagcccg gcctcgagga
     1681 aatcgaggaa catgcgctgc tggtgcctgt aataacccgg atcgcaggtc gcgatctcgc
     1741 ggctccagtc gagcgagagg cccatcgact tgagctggcc ccgcatggtg tcgatgttgg
     1801 cgtaggtcca gtccttggga tggaccttgc gctccatggc ggcgttctcg gccggcatgc
     1861 cgaatgcgtc ccagcccatc gggtggagca cgttcaggcc tttggcgcgc ttgtagcggg
     1921 cgaccacgtc gcccatggtg tagttgcgca cgtgccccat atggatgcgc ccggacgggt
     1981 aggggaacat ctcgagcacg tagtatttgg gacgcgggtc atcattccgg gtgcggaaga
     2041 tgtcgcgctc ggaccaggcc gtctgccatt tcggctcggc ttccttggcg ttgtaacgct
     2101 cggacgtcat cggacgtgga tggtcagtct caataaacaa aggggggcgc gcggcttgcg
     2161 ccgcgccgcg cgcgcggact aggacacgaa cggcttgtca aggtcaacgg ccgcccgggg
     2221 gcgccgcctt aattgggatc atcgatgcgc gatcctcaag aaagtgttgc acggttgcag
     2281 gccgtccagg ccgcggtggc ccgcgcggcg cgggatttcg accgtgagcc cgcctccgtc
     2341 accctgatcg ccatctcgaa gacctttgcc gccgaggcga tcgagccggt gctcgcggcc
     2401 gggcaacgcg tcttcggcga gaactacgtc caggaggcca aagccaagtg gacggcgctg
     2461 cgcgagcgtt attccgggac cgaactgcat atggtcgggc cgctgcagtc caacaaggca
     2521 agggacgccg ttgccctgtt cgacgtgatc cacacgctcg accgggcatc gctggccgag
     2581 gctctcgcca aggagatggc gcggcagggc cgccggccgc ggctgttggt gcaggtcaat
     2641 accggcgagg agccgcagaa aggtggcctc attcccggcg aggcggatgc tttcatcgcg
     2701 gcctgccgcg agcgctgggg cctccccgtc gagggcttga tgtgcatccc gccggcggac
     2761 gagccgcctt cgccgcattt cgcgctgctc agcaagatcg cggtgcgcaa cggcctgcag
     2821 accttgtcga tgggcatgag cgccgatttc gaggcggcga tccagctcgg cgcgacgcat
     2881 gtccgcatcg gcacggcgat cttcggcgag cgcgcgtgac cttcccggaa gggacggaga
     2941 gacgccgacc gcgccgctta ccgagcgccg acgccgatgc gtaagattgt cttagcctga
     3001 atcgcgattc actttgcgcg ttaagcggcg gacaagcggt ccggtccaaa agtcgatgcc
     3061 ggacaggaca taagccggga ccaaccggga ggcgtcgaca gatgatcaga ggttctcttt
     3121 atttcttctc gcggcgggtg ctcaaaaccc gccacatcag cgaaggcgac gtgcggacgc
     3181 tcgagcgcgt catcttctcg gacggggtca ccagccgcaa ggaagtggaa gtgctgctgc
     3241 acctggcgcg ccgcgtgccg gccgccgacc cggcctgggc cgacttcctg gtcaaggcag
     3301 tcgtcgattt cgtcgtctgg ggcgcgcgcc cgacgggcta cgttgatccc gacacggccc
     3361 gctggctgat cggaatcttc ggcaggcgcg gcccgtcgaa gctgacgcgc cgggtggcgc
     3421 gcgagatcat gcgcgaagcc gagcatgtcg atgtgcggct ggccgagttc gcgcaaggcc
     3481 gcatccgttt cttcctgcgc acgtgcctcg cctggctgac ggcaccgcgc cgcgcccagg
     3541 cgaagttcaa tcaaccgaac tgggcggcgg ctgccgcgta ggcacgcgag atcggagcgc
     3601 gcctcaagct gttcgcgctc gacccgtttt tcccggcccc ggacgtcgtt ccggggctga
     3661 tttgtttcca gcccgccggc tcgccattgg atctgtgcga gtggtctttc gggcctcagc
     3721 tcacgacgtg gacccgggtc tgcggcccga ttcgcgccag gaggcggcgc atcacggccg
     3781 gggagaccgc gacgcagcct tcggtcggcg cgagcccagg ctgggccaga tgcatgaaga
     3841 tcgcgctgcc ccggccgcgg acgatggggc cgcgattgca gccgatatcg acgacgatgt
     3901 cgtaaaggtg gtcgtcgcgc cacatccgct cgtggccggc agggtagggc agggggacgg
     3961 gctggttgta acgccggtcg cgcgggtcgt cacaccaccc gtcgccgggc cggatcgccg
     4021 ccaaaggaag cctcgtccgc ggccgtaagc ctttgtcggc acggtaaaaa caccccagga
     4081 cgcggaatcg cccgagaggc gttgccccat ccccctcgcg cttgtcccgg cgcgttccgg
     4141 cgcgcccgag gctgcacggg atgaccagcg gcccggcgac gagccggccg cggcggtggt
     4201 cgagcggcga gcggaagacg cggatggtat cgaatgtgct acgtttcatg gcacggtgga
     4261 cgggcttgac ccgtcccttg ttgtcaaggt cgggatgact aatctagacc ggacatgttt
     4321 cagttccttg cgtcagggcc gattgccaca tgtcgaatgc ttgccagctc ctcgtcgtcg
     4381 acgacgacca ggatttgcgg gacaccctcg ccgaacagct tcgcctttat gacgagttcg
     4441 acgtgctgac ggccggtacg gcggccgaat cggcggagct ggcgagaggc gagcgcatcg
     4501 atctcgtcat catggatgtg gggctgcccg acatggatgg ccgtgaagcc gtgcgccaga
     4561 tgcgacgcaa cggctttcgc ggcccgatca tcatgctcac cgcgcaaggc agcgacgccg
     4621 atacggtgct cgggctggac gccggcgcca acgattacgt caccaagccg ttcaagttcg
     4681 ccgtgctgct ggcgcgcatc cgcgcgcaac tgcgccagca cgaagcgagc gaggacgcca
     4741 tcttccgcat cgggccgtac acctttcgcc ccggcgccaa gctgctcgtc aacgagaagg
     4801 gctccaagct caagctgacg gaaaaggaaa ccgcgatcct gcgctatctc taccgggccg
     4861 ggcagaaggt ggtgagccgc gacaccctcc tctcggaagt gtggggttac aacgccaacg
     4921 tcaccacgca cacgctcgag acgcatatct accggctgcg ccagaagatc gagaacaatc
     4981 cgtcgagcgc gcggcttctc gtcaccgagc ccggcggcta caagctgatg ccgtaacgat
     5041 tcgcaacgcg gcgcatggct ctcgacggcg acatcacgat cctgaccaag gcgcctttct
     5101 tcggcctgct cgagccggag gccgtgcgcc tgctcgcctt cgcgtccgag acgcgcaacc
     5161 tgcgccgcga cgaggtgctg ttcgagaaag gcgatcgctc cgacggtgcc tatatcgtga
     5221 tccgcggagc cctcgccctc gacggcggcg acgagaaggc gcaacccttc atcgccgagc
     5281 cgggagcgct cgtcggccac atggcgctgt tcctgcgcac gccgcggccg gcaacggcca
     5341 ccgcctgcga cgacacgacg gtcatgcgca tctccccgac gctgctgcgc cgcgtgctcg
     5401 aggagtttcc gagatccgcc gggacgcttt atcaggcctt gagcgaggac cttgcaggtc
     5461 tcaccgaggg actggagcgc gtgcggcgcc gcctcgagac cgtcaacgcg tgatcacctc
     5521 tcccgcaaag cgggagagag cagccctcac aattccagcg tcgcggtgac gggcacgtgg
     5581 tcggacggcc ggatccagcc gcgcgtctgc cgggcgacgt cgacgccgcg caaggttccg
     5641 gccagatcgg gcgagatcca gatgtggtcg agacgccggc ctttgtcggc ggcccgccag
     5701 tcgggtgagc ggtagctcca ccacgtgtag atcttccgcg gctcaggggt gaggtgccgc
     5761 gcggcatcga tccagcctgc ctcctggcgc agcgtctcga gtgcttccgt ttcgacaggc
     5821 gtatggctga ccacgccgag gagctgcttg tggctccaga cgtcgtgctc gagcggagcg
     5881 acgttg
//
LOCUS       DATAIQ010001085         1666 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_269951, whole genome shotgun sequence.
ACCESSION   DATAIQ010001085 DATAIQ010000000
VERSION     DATAIQ010001085.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1666)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1666)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1666
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_269951"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..241)
                     /locus_tag="VHN20_17895"
     CDS             complement(<1..241)
                     /locus_tag="VHN20_17895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013500095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004488 - methylenetetrahydrofolate
                     dehydrogenase (NADP+) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetrahydrofolate dehydrogenase/cyclohydrolase
                     catalytic domain-containing protein"
                     /protein_id="HEX2727700.1"
                     /translation="MSAALIDGKVYAEGLRARVAAAVAQLAGHGVTPGLAVVLVGDNP
                     ASQVYVRNKALQTTQAGMRSFDHTVPASIGEADLLA"
     gene            complement(238..564)
                     /locus_tag="VHN20_17900"
     CDS             complement(238..564)
                     /locus_tag="VHN20_17900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015930193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF167 family protein"
                     /protein_id="HEX2727701.1"
                     /translation="MTGTAWRPVHGGIEVRVRVTPRGGRDALDGVETLADDRPVLKIR
                     VRAAPAEGAANEAVRRILAKALDRPASAVGLETGAAARVKTFSVAGDPAALGDKLARL
                     AGAGVP"
     gene            complement(564..863)
                     /locus_tag="VHN20_17905"
     CDS             complement(564..863)
                     /locus_tag="VHN20_17905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010684838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggT family protein"
                     /protein_id="HEX2727702.1"
                     /translation="MRSLLWLIDTVIMLYVYLLIASAILSWLVAFNVVNSRNDVVRAI
                     WDFLYRVTEPALRPIRRVLPNLGGIDISPIILILLLLFARSLIQELFATAVYGRV"
     gene            1232..1307
                     /locus_tag="VHN20_17910"
     tRNA            1232..1307
                     /locus_tag="VHN20_17910"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1265..1267,aa:Ala,seq:cgc)
     gene            complement(1370..>1666)
                     /locus_tag="VHN20_17915"
     CDS             complement(1370..>1666)
                     /locus_tag="VHN20_17915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012252704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727703.1"
                     /translation="GVEGGSFDGTWHVRLVTQSGTCDSSYSQMVAIENGRVRPVGGAA
                     AISGGVGSDGRVALTIAQSVATADAQGRLRSKAGSGSWNLPMLGCTGSWTARRA"
BASE COUNT          270 a          581 c          582 g          233 t
ORIGIN      
        1 gcgccaggag gtccgcctcg ccgatcgagg ccgggaccgt gtggtcgaac gagcgcatgc
       61 ccgcctgcgt ggtctggagg gccttgttgc gcacgtaaac ctggctcgcc gggttgtcac
      121 cgaccaggac gacggcgagg ccgggcgtca cgccgtggcc ggcgagctgt gccaccgcgg
      181 cggcgacgcg ggcgcgcagg ccttcggcat agaccttgcc gtcgatcagc gccgcgctca
      241 cggaacgccg gctcccgcaa gtcgcgccag cttgtcgccg agcgccgccg gatcgcccgc
      301 gaccgaaaac gtcttcacgc gcgccgccgc gcccgtctcg aggccgaccg cagaggcagg
      361 tcggtcgagc gccttggcca ggatgcgccg cacggcctcg ttggcggcgc cctcggccgg
      421 cgccgcgcgc acccggatct tcaggaccgg acggtcgtcg gccagcgtct cgacgccgtc
      481 gagcgcgtcg cgcccgccgc gcggcgtcac gcgcacccgc acctcgatac cgccatggac
      541 cgggcgccag gcggtcccgg tcatcacacg cggccgtaga cggcggtggc gaacagctcc
      601 tggatcaggc tgcgcgcgaa caggagcaga aggatcagga tgatcgggga gatgtcgatg
      661 ccgccgagat tgggcaggac cctgcggatc gggcgcaggg ccggctcggt cacgcggtag
      721 aggaagtccc agatggcgcg cacgacgtcg ttgcgcgaat tgaccacgtt gaaggcgacc
      781 agccagctca ggatggcgct cgcgatcagc aggtagacgt aaagcatgat cacggtgtcg
      841 atgagccata gcagggagcg catgcggagg gtccgggtct gggccaggcg tcggctgggc
      901 tggcgatgca gcgcctcgtt tagccgcgct tgcggcgccg aacaacccga ggctgggcaa
      961 tactccacgg caacccaccg gaccgctgca ggttcagagc gtcgggtcgg tgcggcggat
     1021 aaggggcgga ggtatggtgc tccgtcagat ggcccggagc gccgcgcaag gcgcttccct
     1081 cgtgcgacag tactgcaggc gccgtcggcc catgccacgg acggcgcagc attgacacga
     1141 cggaggggcg agtcctaaaa gcgcggcacg caagccggcg gttgccgact tgcgcattta
     1201 tgcggaaccc gggcgagccc agttccgtgt cggggctgta gctcagatgg gagagcgctg
     1261 caatcgcact gcagaggtca ggggttcgaa tcccctcagc tccaccaaag atcacgcgat
     1321 cggctccgct gtcgtagcgg accggccacc gctcctcatg caaccccgat caagctcggc
     1381 gagccgtcca gcttcccgtg cagccgagca tgggcaagtt ccagctgccg gagcccgcct
     1441 tcgaccttag acgcccctga gcatcggccg ttgccacgct ttgtgcgatg gtcagcgcga
     1501 cccgtccgtc actgccgacg ccgcccgaga tcgccgcggc tcccccaacc ggccgcacgc
     1561 ggccattctc gatggccacc atctggctgt agctgctgtc gcatgtgccc gactgggtca
     1621 caaggcgaac gtgccaggtc ccatcgaacg agccgccctc aacccc
//
LOCUS       DATAIQ010001086         3158 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_168565, whole genome shotgun sequence.
ACCESSION   DATAIQ010001086 DATAIQ010000000
VERSION     DATAIQ010001086.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3158)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3158)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3158
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_168565"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..190)
                     /locus_tag="VHN20_17920"
     CDS             complement(<1..190)
                     /locus_tag="VHN20_17920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019963744.1"
                     /note="with YejAEF is involved in resistance to microcin
                     C; Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="microcin ABC transporter permease"
                     /protein_id="HEX2727704.1"
                     /translation="MIAYILRRVLLMLPTLLGIMLISFVIVQFAPGGPVERILAQLQG
                     TDAGATSRIAGGASGDFGG"
     gene            complement(187..2043)
                     /locus_tag="VHN20_17925"
     CDS             complement(187..2043)
                     /locus_tag="VHN20_17925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012331524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX2727705.1"
                     /translation="MTVVRRTVLLGAAAAALARLVPPASAAEQETESHGLSIFGDLKY
                     RPGFARFDYADVQAAKGGVFSTQLTSVLGNQNFETFNTLNIFVLRGDGAAGMPLTFDS
                     LMVRALDEPDAMYGLVAAAVRASGDGLSYHFRLRPEARFRDGSRITARDVAFSLTALK
                     EKGHPRIAQAIRLMLAAEAEGDEVVVVKFAPERGRDLPLTVAALPIFSEAYYRDRDFE
                     AATLEAPLGSGPYKVGRFEVGRFIELDRVPDHWARDLPVNVGHHNFERVRYEYYRDRD
                     VAFEAFKAGAYTYREEFTSRIWTNGYDFQAVKDGRVKREILPDETPSGMQGWWFNTRR
                     DKFGDPRVREAIGLAFDFEWTNVNLMYSAYRRTASFFENSDMRAEGRPGPDELALLEP
                     WRGKVPDEVFGEPYAPPRSDGSGQDRNLLRRADQLLREAGCRRDNNVLKLPNGQPLEI
                     EFLDATPSLQPHTQPFVKNLGLLGIQARSRIVDAAQYQRRENEFDFDVVSRRYGAGPT
                     PGEALRQIFGSRAAAIKGSNNLAGVAHPAVDALLETVIAAKTRDELRTACRALDRVLR
                     AGRYWVPMWYSATHRVAYWDVFGRPANLPKYDLGVPSIWWHDADKARRIGRT"
     gene            complement(2040..>3158)
                     /locus_tag="VHN20_17930"
     CDS             complement(2040..>3158)
                     /locus_tag="VHN20_17930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003600751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX2727706.1"
                     /translation="YWGKDVPARRGTNNFAEIRFEYFRDSTVLLEAFRGDRYDWRSEN
                     SARNWATAYDFPAVKEGRVIKEDFPSRGSGIMQAFVFNLRRDKFKDPRVRRAFNLAFD
                     FEDINRTIFFGQYERINSYFFGTELASAGLPERREREILESVRDKVPASVFTAAYANP
                     VNGAPENVRANLREALRLLQEAGFELKGRQLVNKATGEPLTVEFLGFDPSLERYVLPY
                     KQALERIGIGVEVRLVDAAQYQNRLRSFDFEITTSVWPQSLSPGNEQRDFWGSEAADR
                     PGSRNLAGIKDAAVDALIDQVIFAKDRAELVSATKALDRVLMHRNYVVPQWSLRKVRT
                     ARWNRFGRPDKMPEYGGPAFPTIWWYDEKLAARTGAPR"
BASE COUNT          536 a         1019 c         1094 g          509 t
ORIGIN      
        1 gcccgccgaa atcgccggaa gcgccgccgg cgatgcgcga ggtggcgccg gcgtcggtgc
       61 cttgcagctg cgccaggatg cgctccacag gtccgccggg cgcgaactgc acgatcacga
      121 acgagatcag catgatcccg agcagcgtcg ggagcatcaa caaaacgcgt cgcaggatgt
      181 aagcgatcat gtgcggccga tccggcgggc cttgtcggcg tcgtgccacc agatcgatgg
      241 cacgccgagg tcgtatttag gcaggtttgc ggggcggccg aacacgtccc aataggcgac
      301 gcggtgggtg gcgctgtacc acatcggcac ccagtagcgc ccggcgcgca gaacccggtc
      361 aagagcccgg caggcggtgc gcagctcgtc gcgggtcttt gccgcgatca cggtttcgag
      421 cagggcgtcg acagcaggat gggcgacgcc ggcaaggttg ttggagccct ttatggcggc
      481 cgctcgcgag ccgaagatct gacggagcgc ttcgcccggc gtcggtcccg cgccgtagcg
      541 gcggctgacg acgtcgaaat cgaactcgtt ctcgcggcgt tggtactggg ccgcgtcgac
      601 gatgcgcgag cgcgcctgga tgccgagcag accgaggttc ttgacgaagg gctgcgtgtg
      661 cggctgcagg ctcggcgtgg catcgaggaa ctcgatctcc agcggctgac cgttcggcag
      721 cttgaggacg ttgttgtcgc gcctgcagcc ggcctcgcgc agcagctgat cggcgcggcg
      781 cagaaggttc ctgtcctggc ccgaaccgtc cgagcgcggc ggcgcgtagg gctcgccgaa
      841 cacctcgtcc ggcaccttgc cgcgccaggg ttcgagcagg gcgagctcgt cgggcccggg
      901 ccggccctcg gcgcgcatgt ccgaattctc gaagaacgag gccgtgcgcc ggtaggcgga
      961 atacatcagg ttgacgttgg tccattcgaa atcgaaggcc agaccgatgg cttcgcgcac
     1021 gcgcgggtca ccgaacttgt cgcggcgcgt gttgaaccac cagccctgca tgcccgaagg
     1081 cgtctcgtcg ggcaggatct cgcgcttgac gcgcccgtcc ttcacggcct ggaaatcgta
     1141 gccgttggtc cagatgcgcg acgtgaactc ctcgcggtaa gtgtaggcgc ccgccttaaa
     1201 tgcttcgaag gcgacgtcac ggtcgcgata atattcgtaa cgcacgcgct cgaagttgtg
     1261 atgaccgaca ttcacgggca agtcccgtgc ccagtggtcg ggaacgcgat cgagctcgat
     1321 gaagcgcccg acctcgaaac gccccacctt gtagggaccg gagccgagcg gggcctcgag
     1381 ggtggcggcc tcgaagtcac ggtcgcggta atacgcctcg gagaagatcg gcagggcagc
     1441 aacggtcagg ggcaggtcgc ggccgcgctc gggcgcaaat ttgacgacca cgacctcgtc
     1501 cccttcggcc tcggccgcga gcatcaggcg gatggcctgc gcaatacgcg gatggccctt
     1561 ctccttcaac gccgtcaggg agaatgcgac gtcacgggcc gtgatcctgg agccgtcacg
     1621 gaagcgcgcc tcgggacgca ggcggaaatg gtagctgagt ccgtcgccgc tcgcgcgtac
     1681 ggcggcagcg acgaggccat acatcgcgtc cggctcgtcg agggcgcgca ccatcaggct
     1741 gtcgaaggtc agcggcatcc cggccgcgcc gtcgccgcgc agcacgaaaa tgttgagcgt
     1801 gttgaacgtc tcgaaattct ggttgccgag caccgacgtg agctgggtcg agaagacgcc
     1861 cccctttgcg gcctgcacat cggcgtaatc gaaccgggcg aagccggggc ggtatttgag
     1921 gtcgccgaag atcgacaggc catggctctc cgtctcctgc tccgccgccg aggcaggcgg
     1981 aacgaggcgg gccagcgccg ccgcggctgc gccgagcagc acggtgcggc ggacaacagt
     2041 catcgcggcg ctccggtcct ggcggcgagc ttctcgtcgt accaccagat cgtcgggaag
     2101 gccgggccgc cgtattccgg catcttgtcg gggcggccaa agcggttcca gcgcgccgtg
     2161 cgcaccttgc gcaggctcca ttgcggcacg acgtagttgc ggtgcatgag cacgcggtcg
     2221 agcgccttgg tcgcggacac gagctcggcc cggtccttgg cgaaaatgac ctggtcgatc
     2281 agcgcgtcga ccgcggcatc cttgatgccg gcgagattgc gcgagcccgg ccgatcggca
     2341 gcctcagaac cccagaagtc gcgctgctcg ttgccgggcg acagggattg cggccacacg
     2401 ctcgtcgtga tctcgaaatc gaacgagcgt agccggttct ggtactgggc ggcgtcgacg
     2461 agcctgacct cgacgccgat gccgatgcgc tccaaagcct gcttataggg cagaacgtaa
     2521 cgttccaggc tcggatcgaa gcccaggaac tcgacggtca gcggctcgcc ggtcgccttg
     2581 ttgacgagct ggcgcccctt cagctcgaag cccgcttcct gaaggaggcg cagcgcctcg
     2641 cgcaggttgg cgcgcacgtt ctcgggcgcg ccgttgacgg ggttcgcgta agccgccgtg
     2701 aagaccgagg ctggaacctt gtcgcgcacg ctctcgagga tttcgcgctc ccgcctctcc
     2761 ggcaggcccg ccgaggcaag ctcggtcccg aagaaatacg agttgatgcg ctcgtattgc
     2821 ccgaagaaga tcgtgcggtt gatgtcctcg aaatcgaagg cgaggttgaa ggcccggcgc
     2881 acccgcgggt ccttgaactt gtcgcgccgc aggttgaaga cgaaggcctg catgatcccg
     2941 gagccgcggc tcggaaaatc ctccttgatg acgcggcctt ccttgacggc agggaagtcg
     3001 taagccgtgg cccagttgcg ggcgctgttc tcggaccgcc aatcgtagcg atcgccccga
     3061 aacgcctcga gcagcaccgt cgagtcacgg aaatactcga agcggatctc agcgaaattg
     3121 ttggtgcccc ggcgcgccgg cacgtccttg ccccagta
//
LOCUS       DATAIQ010001087         1694 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_168647, whole genome shotgun sequence.
ACCESSION   DATAIQ010001087 DATAIQ010000000
VERSION     DATAIQ010001087.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1694)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1694)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1694
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_168647"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            21..410
                     /locus_tag="VHN20_17935"
     CDS             21..410
                     /locus_tag="VHN20_17935"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX2727707.1"
                     /translation="MARLAVAEQKWPEVADAAEKALKLNPYLAPDIYFYSAVANLNLQ
                     KLDIAEEHAQQALKLDERHRFPKINHLLGVIHAQRQNYPKAAENLRDYLKFAPQAADA
                     DAVRKQLAELEKMAGGEAGGQQATQAQ"
     gene            complement(447..833)
                     /locus_tag="VHN20_17940"
     CDS             complement(447..833)
                     /locus_tag="VHN20_17940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727708.1"
                     /translation="MTLTRIAAAGAAVLALSTVAAWRIAAYAPQELDPLKVASNTHKL
                     LFENQFMRVIQAKVPAGSLEPKHSHPKGLTVYLADYDIEQKAFPDGKVTRAHRTFGTV
                     SWSDAVVHEVRNTGKTNSHAVRIELK"
     gene            complement(870..>1694)
                     /gene="recA"
                     /locus_tag="VHN20_17945"
     CDS             complement(870..>1694)
                     /gene="recA"
                     /locus_tag="VHN20_17945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008094 - ATP-dependent activity, acting
                     on DNA [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HEX2727709.1"
                     /translation="AGGMAAFIDVEHALDPIYARKLGVDVDNLLVSQPDYAEQALEIT
                     SVLISSGSIDVLVVDSVAALVPKAELDGEMGDSFVGIQARLMSQAMRKLTGNVSKSNT
                     CLIFINQIREKIGVMFGSPETTSGGRALKFYSSVRLDIRRIAAIKEGDVVIGNRTKAK
                     VVKNKVAPPFREAEFDILYGEGMSREGDLIDLGVAHNVVEKSGSWFSYKGERIGQGRE
                     NSRQFLKDNPDIRQKIDAELRATLGLVKLDMTDVSENGDAAPPPAAQPAARQAVRR"
BASE COUNT          290 a          495 c          601 g          308 t
ORIGIN      
        1 tcgtgagccc gtatgcgcag atggcgcggc tcgcggtggc cgagcagaag tggccggagg
       61 tagccgatgc agcggagaag gctctcaagc tgaatccgta cctggcgccg gacatttact
      121 tctacagcgc ggtcgcgaac ctcaacctgc agaagctcga catcgcggaa gagcacgcgc
      181 agcaggcgct gaagctggac gagcggcatc gctttccgaa gatcaatcat ctgctgggcg
      241 tgattcacgc gcagcggcag aattatccca aggcggcgga gaatctgcgc gactatctga
      301 agttcgcgcc gcaggctgcc gatgccgacg cggtacgcaa gcagcttgcc gagctcgaga
      361 agatggcggg cggcgaagcg ggcggtcagc aggcgacgca ggcgcaataa acaggcgagc
      421 tgcgccttcc tacggggccg gcgccgctac ttcaattcga tgcggaccgc atgggagttg
      481 gtcttgcccg tgttgcggac ctcgtgcacg accgcatcgc tccaggacac agtgccgaag
      541 gtgcggtgcg cgcgcgtgac cttgccgtcc gggaacgcct tctgctcgat atcgtagtcg
      601 gcgaggtaga cggtcaggcc cttgggatgg ctgtgtttgg gctcgagcga gccggcaggc
      661 accttggcct ggatgactcg catgaactga ttttcaaaca gcagcttgtg ggtattggac
      721 gcgaccttca gggggtcgag ctcctggggt gcgtaggccg cgatgcgcca tgcggcgacg
      781 gtcgacagcg cgagcaccgc ggcgcccgcc gcagcgattc gggtgagagt catccgtcga
      841 tactacaccc gccggtgccg ggcttcggct cagcggcgga cggcctggcg cgcggcgggc
      901 tgcgccgcag ggggcggggc ggcgtccccg ttctccgaca cgtcagtcat atcgagcttg
      961 acgagtccga gcgtcgcgcg gagctcggcg tcgatcttct ggcggatgtc gggattgtcc
     1021 ttgaggaact ggcgcgagtt ctcacgtccc tggccgatgc gctcgccttt atagctgaac
     1081 caggagccgc tcttctcgac gacgttgtgg gcgacgccga ggtcgatcag gtcgccttcg
     1141 cgcgacatgc cctcgccgta gagtatgtcg aactcggctt cgcggaacgg aggcgcgact
     1201 ttgtttttga ccactttcgc cttggtgcgg ttgccgatga cgacatcgcc ttctttgatg
     1261 gcggcgatgc ggcggatgtc gaggcggaca gaggagtaga acttcagggc gcgcccgccg
     1321 gaggtggtct cgggactgcc gaacatgacg ccgatcttct cgcggatctg gttgatgaag
     1381 atcaggcagg tattcgactt cgacacgttg ccggtgagct tgcgcatggc ctgggacatg
     1441 aggcgcgcct ggatgccgac gaagctatcg cccatttcgc cgtcgagctc ggctttcgga
     1501 acgagcgccg cgaccgaatc gacgaccagc acatcgatgg agccggagga gatgaggacg
     1561 ctggtaatct cgagcgcctg ctcggcgtag tcgggctggg agacgaggag attgtcgacg
     1621 tcgactccga gtttgcgcgc gtagatgggg tcgagcgcgt gctcgacatc gatgaaggcg
     1681 gccatgccgc cggc
//
LOCUS       DATAIQ010001088         2269 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_363390, whole genome shotgun sequence.
ACCESSION   DATAIQ010001088 DATAIQ010000000
VERSION     DATAIQ010001088.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2269)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2269)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2269
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_363390"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(2..859)
                     /locus_tag="VHN20_17950"
     CDS             complement(2..859)
                     /locus_tag="VHN20_17950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009494038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX2727710.1"
                     /translation="MSAEQQTLPPQTQDRQPGRETEMHPRPDYEPRFAGCGRLAGKVA
                     LITGGDSGIGRAVSVLFAREGADVAIVYLNEGEDARETVRLVEREGQTCIAIAGDVGD
                     ASFCKEAAQQVLDRFGHIDVLINNAAEQHPKRDLTEIAPEQLEATFRTNIFGYFFMTQ
                     AVLPHLKEGAAIVNCGSVTAYRGSPELLDYSATKGAITTFTRSLAQSLVKRGIRVNGV
                     APGPIWTPLIPATFDADRVKSFGANTPMKRPGQPNEVAPCFLFLACDESSYVTGSFLH
                     PNGGDPTES"
     gene            complement(1000..1554)
                     /locus_tag="VHN20_17955"
     CDS             complement(1000..1554)
                     /locus_tag="VHN20_17955"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018700363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008752 - FMN reductase (NAD(P)H) activity
                     [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0052873 - FMN reductase (NADPH) activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent FMN reductase"
                     /protein_id="HEX2727711.1"
                     /translation="MNVLGVSGSLRKGSFNSAALRAAQSLAPHGMTIQVAVIGDFPLY
                     NEDVRAVGFPPPVERFRTQIAAADALLFVTPEYNFSVPGVLKNAIDWASRPPNQPFNE
                     KPVAIMGAAGGPLGTARAQYHLRQVLYGLNAFLVNKPEVFIGQAATKFDEAGDLTDDT
                     TKDFIRKLLESLAAWTKRVQAGAA"
     gene            complement(1766..>2269)
                     /locus_tag="VHN20_17960"
     CDS             complement(1766..>2269)
                     /locus_tag="VHN20_17960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008971144.1"
                     /note="catalyzes the thiolytic cleavage of
                     beta-ketoadipyl-CoA to succinate and acetyl-CoA; Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoadipyl-CoA thiolase"
                     /protein_id="HEX2727712.1"
                     /translation="ARLKTPFRNPGTVTAGNASGVNDGAAAMILASADAVARHGLKPR
                     ARILGMATAGVPPRIMGIGPVPATRKLVERLGLKVSDFDVIELNEAFASQALAVLRQL
                     GVPDDAEHVNPNGGAIALGHPLGMSGARIAATTVHQLEKSGGRLGLATLCVGVGQGVA
                     LAIERVA"
BASE COUNT          348 a          721 c          799 g          401 t
ORIGIN      
        1 atcagctttc cgtcggatcg ccgccgttcg gatgcaggaa gctgccggtg acgtaagagg
       61 attcgtcgca agcgaggaac aggaagcacg gcgccacctc gttgggctgg ccgggccgct
      121 tcatcggcgt gttggcgcca aagctcttca ccctgtcggc atcgaatgtc gcggggatca
      181 acggcgtcca gatcggtccc ggcgccacgc cgttgacgcg gatgccgcgc ttgaccagtg
      241 actgcgcgag cgagcgcgtg aaggtcgtga tggcgccctt ggtggcgctg taatcgagca
      301 gctcggggct gccgcgatag gcggtgacgg agccgcaatt gacgatcgcc gcgccctcct
      361 tgaggtgcgg cagcaccgcc tgcgtcatga agaagtagcc gaagatgttg gtgcggaacg
      421 tggcctccag ctgctcgggc gcaatctcgg tcaggtcgcg cttcgggtgc tgctcggcag
      481 cattgttgat cagcacgtcg atgtgcccga agcggtcgag gacctgttgc gcggcctctt
      541 tgcagaacga agcgtcgccc acgtcgccgg cgatggcgat gcaggtttgt ccctcgcgtt
      601 ccacgagccg caccgtctcg cgcgcgtcct cgccttcgtt gagatagacg atcgccacgt
      661 cggcgccttc gcgtgcgaac aggaccgaga cggcccggcc gatgccgctg tcgccgccag
      721 tgatgagagc cactttgccg gcgagcctgc cacatcccgc aaaacgcggt tcgtaatcgg
      781 gccgcgggtg catttcggtc tcgcgtcccg gctggcggtc ctgggtctgc ggcggcaatg
      841 tctgctgttc ggcgctcatg gcgatgatcc cgttcaagtg ctcaaggtgc ggtggcacgg
      901 cttggattgc cggcgtcggc agcgcaggcg caaacacccg cgcgctgcct caacgcagcc
      961 ttgtcgagag cggttcctgg gaatgggagc gccggcgggt caggcggcac cggcctgcac
     1021 gcgcttcgtc cacgccgcca gcgactcgag cagcttgcgg atgaagtcct tggtcgtgtc
     1081 gtccgtgagg tcgccggcct cgtcgaattt cgtcgcggcc tggccaatga acacttccgg
     1141 cttgttcaca aggaacgcgt tcaggccata gagcacctgg cgcaggtggt actgggcgcg
     1201 cgcggtgccg agtgggccgc ccgccgcgcc cataatggcc accggcttct cgttgaacgg
     1261 ctggttgggc ggacgcgagg cccagtcgat ggcgttcttg aggacgccgg gaacggagaa
     1321 attgtattcg ggcgtgacga agagcagcgc gtccgcggcg gcgatctgcg tgcggaagcg
     1381 ttccacgggc ggtgggaagc cgacggcgcg cacgtcctca ttatagagtg ggaagtcgcc
     1441 gatcacggcg acctgaatgg tcatgccgtg cggcgccagg ctttgcgccg cgcgcaacgc
     1501 cgccgagttg aatgagcctt tgcgcaggct tcccgagaca ccgagtacgt tcatggccat
     1561 tccttgctga tccggcaaag caaaactcgc aggacccgga gctgatccgg atcatgtgac
     1621 aacggatggg agtagcctcg gttcgagttc aaccgatccc gtctccgagc gggatcagtt
     1681 cggattgaat cgatcccgct ccgctacttc gtgcgttgca tggtcttttg tcggcgaagt
     1741 agagcctgct tcgccggatc acgcttcagg cgacgcgctc gatggcgagg gcaaccccct
     1801 ggccgacgcc gacgcacaag gtggcgaggc cgagccggcc gccgctcttc tcgagctggt
     1861 gcacggtggt ggcggcgatg cgcgcgccgg acatgccgag cggatgcccg agggcgatgg
     1921 cgccgccgtt cggattgacg tgctccgcgt catcgggaac gccgagctgg cgcagcaccg
     1981 cgagcgcctg gctggcgaat gcttcgttga gctcgatcac gtcgaaatcc gagaccttga
     2041 gcccgagacg ctcgaccagc ttgcgggtcg ccgggaccgg cccgattccc atgatgcgcg
     2101 gcggcacgcc cgccgttgcc attccgagga tgcgcgcccg cggcttgagg ccgtgccgcg
     2161 cgacggcgtc ggcggaggcg aggatcatcg cggccgcgcc gtcgttgacg cccgaggcgt
     2221 tgcccgccgt gaccgtgccc ggattgcgga acggcgtctt gagcctggc
//
LOCUS       DATAIQ010001089         2504 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_270275, whole genome shotgun sequence.
ACCESSION   DATAIQ010001089 DATAIQ010000000
VERSION     DATAIQ010001089.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2504)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2504)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2504
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_270275"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(51..953)
                     /locus_tag="VHN20_17965"
     CDS             complement(51..953)
                     /locus_tag="VHN20_17965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015933548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HEX2727713.1"
                     /translation="MHFDLVDLGLFRHVVEAGSITHGAERAHLALAAASTRIRHMEES
                     LGAALLVRGRQGVTPTPAGRTLLQHARVILAETQRLREDLGAYAGGLAGQVRLLSNTN
                     ALTEFLPGALSAFLAANPQVSIDLEERLSDEIVALIAEGIGDIGIVAGTVDTGRLETY
                     PFRSDRFVLVVARAHPLAGCAAIDFADVLDHDFVGLDRASALQRFLAGKAARIGRPLK
                     LRVQLRSFDAVCRMVECNVGLGIVPETTARRAAQTMAIALVALKDEWATRNLTICVRA
                     LAELPPYARQLVEHLRADGQASAA"
     gene            1147..1539
                     /gene="sdhC"
                     /locus_tag="VHN20_17970"
     CDS             1147..1539
                     /gene="sdhC"
                     /locus_tag="VHN20_17970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045282 - plasma membrane succinate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0000104 - succinate dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase, cytochrome b556
                     subunit"
                     /protein_id="HEX2727714.1"
                     /translation="MADAKAERPLSPHLQIYRWTWTMAMSIFHRATGVANYLGTALVA
                     VWLLAMATSPAAFDAVQGFFGSIIGRLVLFGYTWSLMHHMLGGVRHLVWDFGHGMEPG
                     TRMNMARFTLIGSVALTLVIWAVGYAMR"
     gene            1550..1963
                     /gene="sdhD"
                     /locus_tag="VHN20_17975"
     CDS             1550..1963
                     /gene="sdhD"
                     /locus_tag="VHN20_17975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045282 - plasma membrane succinate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0000104 - succinate dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase, hydrophobic membrane
                     anchor protein"
                     /protein_id="HEX2727715.1"
                     /translation="MVDNRPDIRPSMRTALSRAKGLGPAGHGVEHWWLHRMLAVSNVP
                     LVVAFVIIVASLVGRSHAQALAIVSHPLIAILLVLFIVSVVNHMRLGLQIVIDDYVHD
                     KGRKIAAHIANNFFAAVIATVCLFAILKISFGWVR"
     gene            2077..>2504
                     /locus_tag="VHN20_17980"
     CDS             2077..>2504
                     /locus_tag="VHN20_17980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012385672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HEX2727716.1"
                     /translation="MLEENGTGQKVPGPKTNGAAYPIVDHSFDVVVVGAGGAGLRATM
                     GAAGQGLKTACVTKVFPTRSHTVAAQGGIAASLGNMGPDHWQWHMYDTVKGSDWLGDQ
                     DAIEYLTREAPAAVIELEHAGLPFSRTAEGKIYQRAFGGMT"
BASE COUNT          405 a          824 c          864 g          411 t
ORIGIN      
        1 cctagagaga tacagagcca atctgaagcg gccgcgcacc tgtcgcgcgg ttaggctgcc
       61 gacgcttgcc cgtcggcgcg gagatgctcg accagctgac gtgcgtaggg cggcagctcg
      121 gcgagggcgc gcacgcagat cgtcaggttg cgcgtcgccc attcgtcctt gagcgcgacc
      181 agggcgatcg ccatcgtctg ggcggcccgg cgggcggtgg tctcgggcac gatgccgagg
      241 ccgacattgc actcgaccat gcggcagacg gcgtcgaagc tgcgcagctg cacgcgcagc
      301 ttgagagggc ggccgatgcg cgccgccttg ccagcaagaa agcgctgcag ggcgctcgcc
      361 cgatcgagcc cgacgaagtc gtggtcgagc acgtcggcga agtcgatggc ggcgcacccg
      421 gcgagcggat gggcgcgcgc caccaccagc acgaagcggt cgctgcgaaa cgggtaggtc
      481 tcgagccggc cggtatcgac cgtgccggcg acgatgccga tgtcgccgat gccttcggcg
      541 atcagggcga cgatctcgtc gctcaggcgc tcttcgaggt cgatcgagac ctgcgggttg
      601 gcggccagga aagcgctcag ggcgccgggc aggaattcgg tcagcgcgtt ggtgttggac
      661 aagagccgca cctgcccggc gaggccgccg gcataagcgc caaggtcctc gcgcaaccgc
      721 tgcgtctcgg cgaggatgac gcgggcgtgc tgcagcaggg tgcggccggc cggggtcggc
      781 gtcacgccct ggcggccgcg cacgaggagc gccgccccga gcgattcctc catgtggcgg
      841 atgcgcgtcg aggcggcggc gagcgccaga tgggcgcgct cggcgccgtg cgtgatgctg
      901 ccggcctcga ccacgtggcg gaacagaccg agatcgacga gatcgaaatg catcgggtca
      961 gccttcgtca ggcacgaagc cagtctataa caatgaccaa ttgtgggaag gcggcgccga
     1021 gcgcaaattt cgtggcgggc gaagcctcgg ggccgctgat tgcgcgttgc agcgtgctcg
     1081 cggttccgtt aggaaccggg cgcgcacgat ccgcgagccc cgatcgccga tgaggagttc
     1141 ttgagaatgg ccgacgccaa ggccgagcgg ccgctttcgc cgcacctgca gatctaccgc
     1201 tggacctgga cgatggccat gtccatcttc caccgcgcca cgggagtcgc caactacctc
     1261 ggcaccgccc tcgtcgccgt gtggctcctc gccatggcga caagccccgc cgccttcgat
     1321 gccgtgcagg gcttcttcgg ctcgatcatc ggccggctgg tcctgttcgg ctacacatgg
     1381 tcgctgatgc accacatgct gggcggcgtg cgccacctcg tctgggactt cggccacggc
     1441 atggagccgg gcacgcgcat gaacatggcg cgcttcaccc tgatcggttc ggtggcgctg
     1501 acgctcgtca tctgggcggt cggctacgcg atgcgctgag gagagcgaga tggtggacaa
     1561 cagacccgat atccgcccct ccatgcgcac ggcgctgtcc cgcgccaagg gacttggacc
     1621 ggccggtcac ggcgtcgagc attggtggct gcaccgcatg ctggcggtct cgaacgtccc
     1681 gctggtggtc gctttcgtga tcatcgtcgc atcgctcgtc gggcgcagcc acgcgcaggc
     1741 gctggcgatc gtttcgcatc cgctgatcgc gatcctgctc gtgctgttca tcgtgtcggt
     1801 ggtcaatcac atgcgcctcg ggctgcagat cgtgatcgac gactacgttc acgacaaagg
     1861 ccgcaagatc gcggcgcata tcgccaacaa tttcttcgcc gccgtgatcg cgacggtgtg
     1921 cctgtttgca attctcaaga tcagcttcgg ctgggtgcgc tagcgcggga tcgcttcaca
     1981 tgaatcgatc ccgctcaagc gccattttgt ttgtcgcatg acctgttcgg cgaagtggtc
     2041 cccacttcgc ctggtcatgc ttttaggagt tttcctgtgc tggaagagaa cggaaccggt
     2101 cagaaggtcc ccggccccaa gaccaacggt gcggcctatc cgatcgtcga ccacagcttc
     2161 gacgtcgtgg tcgtcggcgc cggcggcgcc ggcctgcgcg cgacgatggg cgcggccggc
     2221 cagggcctca agaccgcctg cgtcaccaag gtcttcccga cccgcagcca cacggtagcc
     2281 gcgcagggcg ggatcgccgc aagcctcggc aacatggggc cggaccattg gcaatggcac
     2341 atgtacgaca cggtcaaggg ctccgactgg ctcggcgacc aggacgcgat cgaatatctg
     2401 acgcgcgagg cgcccgccgc cgtcatcgaa cttgagcatg ccggcctgcc gttcagccgc
     2461 acggcggaag gcaagatcta ccagcgcgcg ttcggcggaa tgac
//
LOCUS       DATAIQ010001090         4418 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_225959, whole genome shotgun sequence.
ACCESSION   DATAIQ010001090 DATAIQ010000000
VERSION     DATAIQ010001090.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4418)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4418)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4418
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_225959"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2044)
                     /gene="pheT"
                     /locus_tag="VHN20_17985"
     CDS             complement(<1..2044)
                     /gene="pheT"
                     /locus_tag="VHN20_17985"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012453516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009328 - phenylalanine-tRNA ligase
                     complex [Evidence IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HEX2727717.1"
                     /translation="MKFTLSWLKDHLDTDARLDEIVETLTRIGLEVERVEDKAQALAN
                     YTVARVVSAEQHPNADRLRVCVVDTGAGEPVQVVCGAPNARTGMKSVFAPPGTFIPGK
                     NITLGVGTIRGVESRGMLVSAFELQLSDDHEGIIDLPQDAPVGRPYAAYAKLDDPVIE
                     INLTPNRPDCTSVHGIARDLAAGGLGVLKPATVPQVKGLGASPDAVALDLEPGDEHLC
                     PAFALRLVRGVKNGPSPEWMQRRLTAIGLRPINALVDITNYVTFDRGRPLHVFDASKV
                     RGNLVVRRARNGEELQALDGRSYRLDDSMVVIADDNGPESIAGIMGGERTGVDAATTD
                     VLIESALWDPLNIAQTGRKLGIITDARYRFERGVDPAFTVPGLDLATRMVTELCGGEP
                     SERQLAGSIPDRDHVIDFPWAEVKRLSGLDLPRAEAKVILEELGFMVSGSGERVRVLP
                     PSWRPDIEGKADLVEEVIRIAGLDRVEAKPLERIEATVARPVLTLIQRRTRLAKRLLA
                     VRGLVEAVTWSFIAASEAKLFGGGDKRLALANPIASDLSDMRPSLLPGLMKAAQRNAD
                     RGYGDVALFEVGQCFGSDEPEGQTIKAAALRRGTARAEGVGRHWDGGAETVDVFDAKA
                     DAMALLTQLGVATAAVQVVPGGPAWFHPGRSGTLQFGPKNVVGAFGEVHPKILKALD"
     gene            complement(2041..3123)
                     /gene="pheS"
                     /locus_tag="VHN20_17990"
     CDS             complement(2041..3123)
                     /gene="pheS"
                     /locus_tag="VHN20_17990"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019904745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009328 - phenylalanine-tRNA ligase
                     complex [Evidence IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HEX2727718.1"
                     /translation="MADLGTLERDLLTQVESAADEATLEAVRVSALGKKGSVSELLKT
                     LGAMTPDERKEKGPLINGLRDKVQTAIASRKEALAEGALEQRLAAERVDVTLPVREGP
                     ETRGRIHPISQVIDELTAIFADIGFAIAEGPDIETDYYNFTALNFPAGHPAREMHDTF
                     FLAPDHKGERKVLRTHTSPVQIRTMKAQQPPIRVIIPGRTYRHDSDQTHTPMFHQVEG
                     LVIDTSSNFAQMKWVLEEFCKAFFEVDHVKMRFRPSFFPFTEPSAEVDIQCSRQGGEI
                     RFGEGNDWMEILGCGMVHPNVLRNCGVDPDKFQGFAWGLGIDRIAMLKYGMPDLRPFF
                     EADVRWLNHYGFRPLDLPSLAGGLTS"
     gene            complement(3366..3734)
                     /gene="rplT"
                     /locus_tag="VHN20_17995"
     CDS             complement(3366..3734)
                     /gene="rplT"
                     /locus_tag="VHN20_17995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018044556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HEX2727719.1"
                     /translation="MARVKRGVTSHAKHKKVLKAAKGYYGRRKNTIRIAKQAVEKAMQ
                     YAYRDRKNRKRAFRALWIQRLNAAVREHGLTYSRFIDGLGKAGIEVDRKVLSDIAIRE
                     PEAFAAIVAQAKAALPQQAA"
     gene            complement(3776..3976)
                     /gene="rpmI"
                     /locus_tag="VHN20_18000"
     CDS             complement(3776..3976)
                     /gene="rpmI"
                     /locus_tag="VHN20_18000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012335024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HEX2727720.1"
                     /translation="MPKMKTKSGAKKRFKISGTGKVLYAQRGKRHGMIKRTNKQIRNL
                     RGTNVLFEGDAERVKKYFLPNG"
     gene            complement(4225..>4418)
                     /gene="infC"
                     /locus_tag="VHN20_18005"
     CDS             complement(4225..>4418)
                     /gene="infC"
                     /locus_tag="VHN20_18005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010912915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HEX2727721.1"
                     /translation="VRRFFEEGDKVKLTMRFRGREMAHTEIGMRLLEKVKAETAEVAK
                     VESEPQMEGRQMVMILAPR"
BASE COUNT          688 a         1459 c         1473 g          798 t
ORIGIN      
        1 catcaagcgc cttgaggatt ttcggatgca cctcgccgaa ggcgccgacg acgttcttgg
       61 ggccgaactg caatgtgccg gagcgccccg gatgaaacca tgccgggccg ccgggcacga
      121 cctgcacggc cgcggtcgcc actccgagct gcgtgaggag cgccatggcg tcggccttgg
      181 cgtcgaacac gtcgacggtc tcggcgccgc cgtcccaatg ccgcccgacg ccttcggcgc
      241 gcgccgtccc gcgccgcaac gctgcggcct tgatggtctg cccctcgggc tcgtccgacc
      301 cgaagcactg gccgacctcg aacaaggcga cgtcgccgta gcctcggtcg gcattgcgct
      361 gcgccgcctt catcaggccc ggcagcaggc tcggccgcat gtcggacaga tcggatgcga
      421 tcggattggc gagcgccaga cgcttgtcgc cgcctccaaa cagctttgct tcgctcgcgg
      481 caatgaacga ccacgtcacc gcctcgacca gcccgcgcac ggcaagcagg cgcttggcga
      541 ggcgggtgcg ccgctgaatc agcgtcagca ccggcctggc gaccgtcgcc tcgatacgct
      601 cgagaggctt ggcctcgacg cggtcgaggc cggcgatgcg gatgacctcc tcgacgagat
      661 cggccttgcc ttcgatgtcg gggcgccagg acggcggcag cactctgacg cgctccccgc
      721 tgcccgagac catgaagccg agctcctcga ggatcacctt ggcctcggcg cgcggcaggt
      781 cgaggcctga gagccgcttc acctcggccc acgggaaatc gatgacatgg tcacggtccg
      841 ggatgctgcc cgcgagctgc cgctcgctcg gctcgccgcc gcacagctcg gtcaccatgc
      901 gcgtggcgag atcgagaccc ggcaccgtga aggccggatc gacgccgcgc tcgaaccggt
      961 agcgcgcgtc ggtgatgatg ccgagcttgc gcccggtctg ggcgatattg agcgggtccc
     1021 acagcgccga ttcgatcagc acgtcggtcg tggccgcgtc gacgccggta cgctcgccgc
     1081 ccatgatccc ggcgatcgat tccggaccgt tgtcgtcggc tatcacaacc atgctgtcgt
     1141 cgagacgata gctgcggccg tcgagtgcct gcaactcctc gccgttgcgc gcgcggcgca
     1201 cgacgaggtt gccccggacc ttgctggcat cgaacacgtg caggggacgg cctcggtcga
     1261 acgtgacgta gttggtgatg tcgacgaggg cgttgatcgg gcgcagtccg atagccgtga
     1321 ggcggcgctg catccattcg ggcgacgggc cgttcttgac cccgcgcacc agcctcaaag
     1381 cgaaagcggg gcaaaggtgc tcgtcgcccg gctcgagatc gagcgccact gcgtcagggg
     1441 aggcgcctaa tcccttgacc tgcggaaccg tcgccggctt gagcacgccg aggccgccgg
     1501 cggccaagtc ccgcgcgatg ccatgcaccg aggtgcagtc gggccggttc ggcgtgaggt
     1561 tgatctcgat caccggatcg tcgagcttcg cgtaagccgc atacggccgc ccgaccggcg
     1621 cgtcctgcgg cagatcgatg atgccctcgt gatcgtcgga gagctgcagc tcgaaagccg
     1681 agaccagcat gccgcggctt tctacgccgc gaatggtgcc gacgccgagc gtgatgttct
     1741 tgcccgggat gaacgtgccc ggcggggcga agacgctctt catgccggtg cgcgcgttgg
     1801 gcgcgccgca caccacctgc accggctcgc cggcacccgt atcgaccacg cacacgcgca
     1861 gtcgatcggc attcgggtgc tgctcggctg agacgacgcg cgcgaccgtg tagttggcga
     1921 gcgcctgcgc cttgtcctcg acgcgttcga cctcaagccc gatgcgcgtc aaggtctcga
     1981 cgatctcatc gagccgggca tcggtgtcga gatggtcctt gagccaggag agcgtgaact
     2041 tcatgacgtc agcccacctg cgaggctcgg aagatcgagc gggcggaaac cgtagtggtt
     2101 gagccagcgc acatcagcct cgaagaacgg gcgcaggtcc ggcatgccgt atttgagcat
     2161 ggcgatgcgg tcgattccga gcccccaggc gaaaccctgg aatttgtcgg gatcgacacc
     2221 gcagttcctg agcacgttcg gatgcaccat gccgcagccg aggatctcca tccagtcgtt
     2281 gccttcgccg aagcggattt cgccgccctg ccgcgagcac tggatgtcga cttccgccga
     2341 tggctccgtg aacgggaaga acgacggccg gaagcgcatc ttgacgtgat cgacctcgaa
     2401 gaacgccttg cagaattcct cgagcaccca cttcatttgc gcgaagttgg acgacgtatc
     2461 gatcacaagc ccttcgacct gatggaacat cggcgtgtgt gtctgatccg agtcgtggcg
     2521 atatgtgcgc cccggaatga tcacccggat cggcggctgc tgcgccttca tggtgcggat
     2581 ctgcaccggc gaggtgtgcg tgcgcagcac cttgcgctcg cccttgtggt cgggcgcgag
     2641 gaagaaggtg tcgtgcattt cccgtgcggg atgcccggca gggaagttga gcgccgtgaa
     2701 gttgtagtag tcggtctcga tgtcgggccc ttcggcgatc gcaaagccta tatcggcaaa
     2761 gatcgcggtg agctcgtcga tcacttggct gatcggatgg atgcggccgc gcgtctccgg
     2821 tccttcgcgc accggcagcg tcacgtccac ccgctcggcc gcgaggcgct gctcgagcgc
     2881 gccctcggcg agcgcttcct tcctggatgc gatggcggtc tgcaccttgt cgcgcaggcc
     2941 gttgatcagc gggcctttct ccttgcgctc gtcgggcgtc atggcgccga gcgtcttgag
     3001 cagctcggag acggagccct tcttgccgag cgccgagacg cggacggcct cgagggtggc
     3061 ttcgtcggcc gcactttcga cctgtgtcag cagatcgcgt tcgagtgttc caagatcagc
     3121 catcggtcgt tcaagcttcg cgcgagagtg tggagcattg gacccgttgc ccgggcaggc
     3181 cggcgacagg gccggcgtat ggccgtgcga agccggttcc agcttcggcg gcctacgctc
     3241 tggagtcgcg gtccgggaac gtcaagtgcc ggccggccgc aaccggccgc gcggccgcca
     3301 tgtggccgcc ggacgcgtca gcctcgcaaa ggttgggaac ggcgcgagcc gctccgaagt
     3361 cgcggttacg cggcctgctg cggcagcgcg gccttggcct gggcgacgat cgccgcaaac
     3421 gcttccggct cgcggatggc gatgtcggac aggaccttgc ggtcgacttc gatcccggcc
     3481 ttgccgaggc cgtcgataaa tcgggaatag gtcaggccgt gctcgcgcac cgccgcattg
     3541 aggcgctgga tccacaacgc ccggaaagcg cgtttgcggt tcttgcggtc gcgataggcg
     3601 tattgcatcg ccttctcgac cgcctgcttg gcgatgcgga tcgtattctt gcgccggccg
     3661 taatagccct tcgcggcctt gaggactttc ttgtgcttgg cgtggctggt cacgccgcgt
     3721 ttgacgcggg ccatggatga tctccttcag aacctggaag tgaacgggga agtattcagc
     3781 cgttgggcag gaaatacttc ttaacccgct ccgcatcgcc ctcgaacagc acgttggtgc
     3841 cacgcaggtt gcggatctgc ttgttggttc gcttgatcat gccgtgacgc ttgccgcgct
     3901 gggcgtagag caccttgccg gtgccgctga tcttgaagcg ctttttggcg cctgacttgg
     3961 tcttcatctt gggcatttgg ctctcctggg cgcgtcctgg cgacggttga cccggccgat
     4021 cggcgcaatg ctgtcatgag caaaatgaac cgccacggca gccctattgg ccgggcggtt
     4081 caacgaaggt gcggcttatg gcagaggcgt cgcaaaaaag caacgggccg tcaccaggtc
     4141 cggccccaag gcacgagacc ggcgaagtgg gccccacttc gccgaggggt cgtgcgttaa
     4201 cctttggttg cctggccgac ccgcttagcg cggggccagg atcatcacca tctggcggcc
     4261 ttccatctga ggctcgctct cgacctttgc gacctcggcc gtctcggcct tgaccttttc
     4321 cagcagcctc attccgatct ccgtatgcgc catctcgcgg ccgcggaaac gcatcgtgag
     4381 cttcaccttg tccccttcct cgaagaagcg gcggaccg
//
LOCUS       DATAIQ010001091         3310 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_225978, whole genome shotgun sequence.
ACCESSION   DATAIQ010001091 DATAIQ010000000
VERSION     DATAIQ010001091.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3310)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3310)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3310
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_225978"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..274)
                     /locus_tag="VHN20_18010"
     CDS             complement(<1..274)
                     /locus_tag="VHN20_18010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020094246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727722.1"
                     /translation="MPGTEALSGPVKYFIAFTVIFALLALMALVLRRLTGGRLAMPMN
                     ERGRSRQPRLGIVDVYDLDRQRQLILLRRDNVEHLLLIGGPNDVIVE"
     gene            474..872
                     /gene="flgB"
                     /locus_tag="VHN20_18015"
     CDS             474..872
                     /gene="flgB"
                     /locus_tag="VHN20_18015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015822945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgB"
                     /protein_id="HEX2727723.1"
                     /translation="MSLTSLPLVAMLKTRMHWHQSRQKLLAENVSNADTPGFQPKDLK
                     VPTFAPNGAATGGALAVERTDPAHFAGASARPGEDPRHARRFEVTPSGNAVSLEDEML
                     KVAQNQSDFQLASSLYQKSLQMLRTATGRR"
     gene            879..1289
                     /gene="flgC"
                     /locus_tag="VHN20_18020"
     CDS             879..1289
                     /gene="flgC"
                     /locus_tag="VHN20_18020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015931985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009425 - bacterial-type flagellum basal
                     body [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgC"
                     /protein_id="HEX2727724.1"
                     /translation="MDFLKTISVAASGLKAQSGRMRVIAENIANADSTADKPGADPYR
                     RKIASFSHKFDKELEANVVGLGRIRTDRTAFRTRVDPGHPAADEKGEVKLPNVNSLIE
                     TTDMREAQRSYEANLNLITATRRMISRTLEILRV"
     gene            1303..1614
                     /locus_tag="VHN20_18025"
     CDS             1303..1614
                     /locus_tag="VHN20_18025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017485877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009288 - bacterial-type flagellum
                     [Evidence IEA];
                     GO_function: GO:0003774 - cytoskeletal motor activity
                     [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-basal body complex protein FliE"
                     /protein_id="HEX2727725.1"
                     /translation="MPTNAIAAGAYAATQGLVGTSRKPEAGAAAGGLDFTSLVQSAVQ
                     GVAQSGRNAEAQAMAAAGGKADIVDVVTAVAESEAALETLVAVRDRVIAAYEEIMRMP
                     I"
     gene            1629..1895
                     /gene="fliQ"
                     /locus_tag="VHN20_18030"
     CDS             1629..1895
                     /gene="fliQ"
                     /locus_tag="VHN20_18030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012319200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009288 - bacterial-type flagellum
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FliQ"
                     /protein_id="HEX2727726.1"
                     /translation="MTGAAILDIARDGIVTFLKVAGPLMLVALLIGFVISLLQALTQI
                     QEQTLIYVPKILAVCAAMLLLLPFMGDALAGYMTRIAIRIASGG"
     gene            1916..2671
                     /gene="fliR"
                     /locus_tag="VHN20_18035"
     CDS             1916..2671
                     /gene="fliR"
                     /locus_tag="VHN20_18035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019903174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006605 - protein targeting [Evidence IEA];
                     GO_process: GO:0044780 - bacterial-type flagellum assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthetic protein FliR"
                     /protein_id="HEX2727727.1"
                     /translation="MNLLLPEIATAYMLTFARVGTLVMLMPGIGEQLISRRARLGLAI
                     LLALVLFPLTRTLLPSGGPPAAVISVMIGEIAIGLMLGLATRMVVAALQTAGTIVAQQ
                     LGLAFAMSVDPAMGGQQAAIGNFLTLLGITLIFAADLHHLAIAAIRDSYMFLPPASGP
                     ETGDAAQLAMRAVGRGFALAVQISAPFIVFGILFNLGLGVLSRLMPQLQVFFLAMPAT
                     ILIGMLVLLAVIGVMMGVFLEDLGRFLSELGGR"
     gene            2672..>3310
                     /locus_tag="VHN20_18040"
     CDS             2672..>3310
                     /locus_tag="VHN20_18040"
                     /inference="COORDINATES: protein motif:HMM:NF013479.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EscU/YscU/HrcU family type III secretion system
                     export apparatus switch protein"
                     /protein_id="HEX2727728.1"
                     /translation="MSEAPEKDDQTEEPTQRKLEEAIKRGDVAKSQEINTLFVLTGFT
                     LALVVASGQVGRSLVFDLRGFLMNAHLVPVDPAGLWAVGRHALWAWIAAAALPLAFIV
                     VGGLAGGAIQHKPLWTTQPLKPQFNRVSPLGGIKRLFGREALIQFVKGLLKIVIVGAV
                     ASAVLWNERDRLDGLARTDVSAMGPATLALALKLLGGVLAIYAFLAVGDAVYQ"
BASE COUNT          540 a         1126 c         1057 g          587 t
ORIGIN      
        1 tctcgacgat cacgtcgttc gggccgccga tcaggagcag gtgctcgacg ttgtcgcggc
       61 gcagcaaaat cagctggcgc tgacggtcga ggtcgtagac gtcgacaatc cccaggcgcg
      121 gctggcgcga ccgcccgcgt tcgttcatgg gcatggccag ccgtccgccg gtcaggcggc
      181 gcagtacaag cgccatcagg gccagaagcg cgaaaatgac cgtgaaggcg atgaagtatt
      241 tgaccggccc gctcagggct tcagtgccag ggatagacaa caagacgcga tctcttggat
      301 accggcgaaa ctctgaccga gaatgctctt ccccgcccgc tcccccaagg ggttaggacg
      361 agggattagg gccttgttaa cacgtttcaa ccggttcgtc gctaggcacc tttaacgccc
      421 ccttaactat cagggcggca atttttgccg ggtaacgccg gaatcatact caattgtccc
      481 ttacaagctt gccgttggtc gccatgctca agacgcggat gcattggcat cagtcgcgcc
      541 agaagctgct cgccgagaac gtcagcaacg ccgacacccc ggggttccag ccgaaggacc
      601 tcaaggtgcc gacctttgcc ccgaacggcg ccgccaccgg gggtgcgctc gcggtcgagc
      661 gcaccgatcc tgcccatttc gccggcgcct cggcgagacc gggcgaggac ccgcgccacg
      721 cccgccgatt cgaggtgacg ccgagcggca acgccgtgag cctcgaggac gagatgctga
      781 aggtggcgca gaaccagtcc gattttcagc tcgcctcgtc gctctaccag aaaagtctgc
      841 agatgctccg taccgccacc ggccgcaggt aatcagccat ggattttctc aagaccatct
      901 ccgttgccgc gtcgggcctc aaagcccagt cggggcgcat gcgtgtcatt gccgagaaca
      961 tcgccaatgc cgattcgacc gccgacaagc cgggagccga tccgtaccgg cgaaagatcg
     1021 cgagcttcag ccacaagttc gacaaggagc tggaggccaa cgtggttggt ctcggccgca
     1081 tccgcactga ccgcaccgcc ttccgcacgc gcgtcgatcc cggccacccg gccgccgacg
     1141 aaaagggtga ggtcaagctg ccgaacgtga attcactgat cgagacgacg gatatgcgcg
     1201 aggcccagcg cagctacgaa gccaacctca acctgatcac cgcaacccgc cgcatgatct
     1261 cgcgtaccct cgagatcctg cgcgtctgaa cggatcgaac cgatgccgac caatgctatt
     1321 gccgcaggcg cctatgccgc cacccaaggt ctcgtgggca cgagccgcaa gccggaggcg
     1381 ggcgccgccg ccggcgggct cgacttcacc tcgctcgtgc agagcgcggt gcagggcgtc
     1441 gcccagtccg gccgcaacgc cgaggcccag gccatggctg ccgccggcgg caaggccgac
     1501 atcgtcgatg tcgtcaccgc cgtcgccgag agcgaggccg cccttgagac actcgtggcc
     1561 gtgcgcgatc gcgtgatcgc cgcctacgag gaaatcatgc gcatgccgat ctgagcaggc
     1621 gattcgtcat gaccggcgcc gccattctcg acatcgcccg cgacggcatc gtcacgttcc
     1681 tcaaggtcgc ggggccactg atgctcgtgg cgctgctgat cggcttcgtg atctcgctgt
     1741 tgcaggctct cacccagatc caggaacaga ccctgatcta tgttcccaag atccttgccg
     1801 tctgcgcggc gatgctgctg ctgctgccct tcatgggcga tgcgcttgcc ggctatatga
     1861 cacggattgc gattcgcatc gcctccggcg gctagttgcc ggctgcccag cccttatgaa
     1921 cctgctgctt cccgagatcg cgaccgcgta tatgctcacc tttgcgcgcg tgggcacgct
     1981 ggtgatgctg atgcccggca tcggcgagca gctgatctcg cggcgcgccc ggctcggcct
     2041 cgccatcctg ctcgcgctcg tgctgtttcc gctgacccgc acgctgctgc cgtcgggcgg
     2101 gcccccggct gcggtgatct ccgttatgat cggcgagatt gccatcggcc tcatgcttgg
     2161 cctcgcgacg cgcatggtcg tggcggcttt gcagacggcc ggcaccattg tcgcgcagca
     2221 actggggctt gccttcgcga tgtcggtcga cccggcgatg ggcgggcagc aggcggcgat
     2281 cggcaacttc ctcacccttc tcggcatcac gctgatcttc gccgccgatc tgcatcatct
     2341 cgccatcgcg gcgattcgcg acagctatat gttcctgccg ccggcgagcg gccccgaaac
     2401 cggcgacgcg gcgcaactcg cgatgagggc ggtcggccgc ggcttcgcgc ttgccgtgca
     2461 gatctcggcg ccgttcatcg tcttcggcat cctgttcaat ctcgggctcg gcgtgctctc
     2521 gcgcctgatg ccgcaattgc aggtgttctt cctggccatg ccggccacca tcctgatcgg
     2581 catgctggtc ctgctcgcgg tgatcggcgt gatgatgggc gtgttcctcg aggatctcgg
     2641 ccgcttcctg agcgagctcg gagggcgctg aatgtccgaa gctccggaga aggacgacca
     2701 aacagaagag ccgacgcagc gaaagctcga ggaggcgatc aagcgcggcg acgtcgccaa
     2761 gagccaggag atcaacacgc tgttcgtgct gaccggcttc acgctcgcgc tcgtggtcgc
     2821 gtcgggccag gtcggccgct cgctggtctt cgacctgcgc gggtttctca tgaacgcgca
     2881 tctcgtgccc gtcgaccccg ccggtctctg ggcggtcggc cggcatgcct tgtgggcctg
     2941 gatcgcggcg gcggcgctgc cgctcgcctt catcgtcgtg ggcggtctcg ccggcggcgc
     3001 gatccagcac aagccgctct ggacgacgca gccgctgaag ccgcaattca accgcgtctc
     3061 gccgctcggt ggcatcaagc ggttgttcgg gcgcgaggcg ctgatccagt tcgtcaaagg
     3121 gcttctcaag atcgtcatcg tcggcgccgt cgcgagcgcg gtgctgtgga acgagcgcga
     3181 ccggctggac ggactggcgc gcacggacgt atccgccatg ggccccgcga cactggcgct
     3241 cgcgctcaag ctgctcgggg gggtgctcgc gatctacgcc tttctggcgg tgggagacgc
     3301 ggtctaccag
//
LOCUS       DATAIQ010001092         2742 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_225984, whole genome shotgun sequence.
ACCESSION   DATAIQ010001092 DATAIQ010000000
VERSION     DATAIQ010001092.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2742)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2742)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2742
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_225984"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(221..928)
                     /locus_tag="VHN20_18045"
     CDS             complement(221..928)
                     /locus_tag="VHN20_18045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727729.1"
                     /translation="MRFRAHILTALMVLSASASAAAEPGADHVVALFKDVCISPATPA
                     EMMSVGEKTAAASGWKVVRSGPAPIPMLHNENGPELALISGWVADLAGAPGSHVFISI
                     VGPELPDLKYTFCMVRPSADFTREDLVSALEVRVGSLLSRVELEREAREDRPSAGTSA
                     GRVPAPAFARPPKEGWHEAWVFNDEIKDGLCGKKVTFSRSHSPPEGMVTMLLFTEFDA
                     PANYAGSTAATRCDRPF"
     gene            complement(936..2132)
                     /gene="sucC"
                     /locus_tag="VHN20_18050"
     CDS             complement(936..2132)
                     /gene="sucC"
                     /locus_tag="VHN20_18050"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011439181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HEX2727730.1"
                     /translation="MNIHEYQAKAVLKEFGVPVPRGKAVFSVDEAEAAARDLGGPVWV
                     VKSQIHAGGRGKGKFKEADAGDKGGVRLARSVDEVKTYVRQMLGKTLVTLQTGPQGKA
                     VNRLYVEEGSDIASEFYLSALVDRATSRVAFVVSTEGGMDIEKVAHDTPEKIHTFSVD
                     PATGIMGHHGRAVAEALGLSGDLAKQAADLVAKLYQAFVTKDMSLLEINPLVCTRDNK
                     LVCLDAKIGFDANALYRRPDIMALRDLTEEDEKEIEASKYDLNYVALDGSIGCMVNGA
                     GLAMATMDIIKLYGAEPANFLDVGGGASKEKVAAAFKIITADPKVQGILVNIFGGIMK
                     CDVIAEGVVAAVREVGLKVPLVVRLEGTNVEQGKKIINESGLNVISANDLDDAAQKLV
                     GAVKGA"
     gene            complement(2148..>2742)
                     /locus_tag="VHN20_18055"
     CDS             complement(2148..>2742)
                     /locus_tag="VHN20_18055"
                     /EC_number="1.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332032.1"
                     /note="Catalyzes the reversible oxidation of malate to
                     oxaloacetate; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HEX2727731.1"
                     /translation="DAMVWALQKFSGLDPKKIVGMAGVLDSARFRHFLAEAFDVSVQD
                     VTAFVLGGHGDDMVPLVRYSTVAGIPLPDLVRMKWTTQEKIDAIVERTRKGGGEIVNL
                     LKTGSAFYAPAASAIAMAESYLRDKKRVLPCAAQLSGQYGINGLFIGVPIVIGANGVE
                     RVVEIELSDEEKGMFGKSVASVQSLVDACKQINKALA"
BASE COUNT          461 a          891 c          889 g          501 t
ORIGIN      
        1 gccgcctgga tctgtccttc ggggctggac ggaccaaggc aagcttcctt caccaaggcc
       61 accgcgcgct cgctcgctgc gtcggcatga cccagacaag ggatcaccaa gataacggca
      121 gtgatgaaca cgcgcacggg attatccctc gtgtgccgtc gcacgcgacg gcttgctccg
      181 ggtgtacgat gccgtgatca gggtggacat atttgatgtc ctaaaagggc cggtcacagc
      241 gcgttgcagc ggtagacccg gcataattcg caggggcatc gaattcggtg aacaggagca
      301 tcgttaccat cccctcaggc ggactgtgac tgcgggagaa ggtaaccttc tttccgcaca
      361 acccgtcttt gatttcgtcg ttgaacaccc acgcctcgtg ccacccctct ttgggtggtc
      421 gcgcgaaagc tggagccggc acgcgtccgg ctgatgtgcc agcgctgggg cgatcctcgc
      481 gagcctctct ctcgagttca acgcgcgaca ggagcgaacc cactcgaacc tccagagcgc
      541 tcaccaggtc ctcgcgtgta aagtccgcgg agggtcggac catgcagaag gtatacttca
      601 ggtccggaag ctccgggccg acgattgaaa tgaatacgtg ggagccgggc gctcccgcca
      661 agtcggccac ccagccgctg atcagcgcca gctcgggacc gttctcgtta tgcagcatcg
      721 ggattggagc gggcccggac cggacgacct tccaacccga cgccgccgcg gttttttccc
      781 caaccgacat catctctgcg ggcgtcgcag gcgaaatgca gacgtccttg aacaaggcga
      841 cgacatgatc cgcccccggc tccgccgcgg ccgaggccga ggcagagagc accatcagcg
      901 ccgtgagaat gtgggcgcga aagcgcatga gctgcctacg cccctttcac cgcgccgacg
      961 agcttctgcg cggcgtcgtc gaggtcgttg gccgagatca cgttgaggcc tgactcgttg
     1021 atgatcttct tgccctgctc gacgttggtg ccttccaggc gcacgacgag cggcaccttg
     1081 agcccgacct ccctgaccgc cgccacgacg ccttcggcga tgacgtcgca tttcatgatg
     1141 ccgccgaaga tgttgaccag gataccctgg accttggggt cggccgtgat gatcttgaag
     1201 gccgcggcga ccttctcctt ggaggcgccg ccgccgacgt cgaggaagtt ggccggctcg
     1261 gcgccgtaga gcttgatgat gtccatcgtc gccattgcga ggccggcgcc gttgaccatg
     1321 cagccgatcg agccgtcgag ggcgacgtag ttgagatcgt atttcgaggc ctcgatctcc
     1381 ttctcgtcct cctcggtgag gtcgcgcagc gccatgatgt cggggcgccg gtaaagcgcg
     1441 ttcgcgtcga agccgatctt ggcgtcgagg cagacgagct tgttgtcgcg cgtgcagacc
     1501 agcgggttga tctcgaggag gctcatgtcc ttcgtgacga aggcctggta gagcttggcc
     1561 acgaggtcgg cggcctgctt ggcgaggtcg ccggacaggc cgagcgcctc ggcgacggcg
     1621 cggccgtgat ggcccatgat gccggtcgcc gggtcgaccg agaaggtatg gatcttctcg
     1681 ggcgtgtcgt gggcgacctt ctcgatgtcc atgccgccct cggtcgagac aacgaaggcg
     1741 acccggctgg tggcgcggtc gaccagcgcc gacaggtaga actccgaggc gatatcggag
     1801 ccttcctcga cataaagccg gttgacggcc ttgccttgcg ggccggtctg cagcgtgacg
     1861 agcgtcttgc cgagcatctg gcggacgtag gtcttgacct cgtcgaccga tctggcgagg
     1921 cgcacgccgc ccttgtcgcc ggcatcggct tccttgaact tgcccttgcc gcgcccgccg
     1981 gcgtggatct gcgacttcac gacccagacc gggccgccga gatcgcgggc ggccgcctcg
     2041 gcctcatcga ccgagaacac ggccttgccg cgcggcaccg gcacgccgaa ctccttgagg
     2101 acggctttgg cttgatactc gtggatgttc atggggctct cttagcgtta cgccagcgcc
     2161 ttgttgatct gcttgcaggc gtcgaccagg ctctgcaccg aggcgaccga cttgccgaac
     2221 atgccctttt cctcgtccga cagctcgatc tcgacgacgc gctccacgcc gttggcgccg
     2281 atcacgatgg ggacgccgat gaacaggcca ttaatgccgt attggccgct cagctgcgcg
     2341 gcgcagggca gcacccgctt cttgtccctg aggtagcttt cggccatggc gatggcggag
     2401 gcggccggcg cgtagaaggc cgaaccggtc ttgagaaggt tgacgatctc gccgcccccc
     2461 ttgcgggtgc gctcaacgat ggcgtcgatc ttctcctggg tggtccattt catgcgcacg
     2521 aggtcgggca gcggaatgcc ggcgaccgtc gagtagcgca ccagcggcac catgtcgtcg
     2581 ccatggccac ccagcacgaa ggcggtcacg tcctggaccg agacatcgaa ggcctccgcc
     2641 aggaagtggc ggaaacgggc cgaatcgagc acgccggcca tgccgacgat cttcttcgga
     2701 tcgaggcccg agaacttctg gagcgcccat accatcgcgt cg
//
LOCUS       DATAIQ010001093         2454 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_76757, whole genome shotgun sequence.
ACCESSION   DATAIQ010001093 DATAIQ010000000
VERSION     DATAIQ010001093.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2454)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2454)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2454
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_76757"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..322)
                     /locus_tag="VHN20_18060"
     CDS             complement(<1..322)
                     /locus_tag="VHN20_18060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727732.1"
                     /translation="MTIAGIRLDAKHLAWLALAAIVIVTIAAWSLLPIEDWINDFTRW
                     IESLGAWAFVAFGLLYVVGTLLLAPGSVMSIAAGVAFGLWGVPLVLLFATTGAAAAFL
                     IARYV"
     gene            complement(319..999)
                     /locus_tag="VHN20_18065"
     CDS             complement(319..999)
                     /locus_tag="VHN20_18065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493374.1"
                     /note="Members of this family of hydrolases with an active
                     site Cys residue belong to MEROPS family C26; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HEX2727733.1"
                     /translation="MTRPIIGVTTSRLGGWRSFLMHRLALARAGARALRLVPGDQLPP
                     KLDGLVIGGGDDIGAEIYGGEVMPDIRIDPERDKLELKLLDTALPAGLPILGICRGSQ
                     MINVALGGTLHTDIYEVYVNAPRMRTVLPRKTVHIENDSRLYRITGCDPCRVNALHHQ
                     SVDRLGRDLRVVARDEAGVVQATEGTGPGFLIGVQWHPELLVLSASQQRLFAALTAAT
                     RPVPEPVA"
     gene            complement(996..1118)
                     /locus_tag="VHN20_18070"
     CDS             complement(996..1118)
                     /locus_tag="VHN20_18070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727734.1"
                     /translation="MAVERVAFDGDRLDALGRAYRAFEGEAKSWADIAERIAFA"
     gene            complement(1119..1982)
                     /locus_tag="VHN20_18075"
     CDS             complement(1119..1982)
                     /locus_tag="VHN20_18075"
                     /inference="COORDINATES: protein motif:HMM:NF023645.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidoligase family protein"
                     /protein_id="HEX2727735.1"
                     /translation="MAEPAFSQHKLIAFDRPPVLTNAQGRTRTVGVEVEFAGITAEAA
                     AKALSLALGGGVRQKDPHAYAVRNSKLGDIAVELDMRYVHPDRKATTLLETMGAKFAS
                     WFGSAVRHVIPCELVTAPVPIDKLHEVDGALAVLRDAGARGTQDGALYAFGLHFNPEA
                     PRLDVETIASIVKAFALLNPWLRRAVAPDATRHFLGFADPFPPDYVRQIAAPDYRPDM
                     TTFIDDYLAANATRNRDLDMLPILAQIDEPRVRARLPNEKINKRPAFHYRLPDARISD
                     PGWSIAPDWNR"
     gene            2231..>2454
                     /locus_tag="VHN20_18080"
     CDS             2231..>2454
                     /locus_tag="VHN20_18080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015887820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX2727736.1"
                     /translation="MANAPYDLLIAGGGINGAGIARDAAGRGLRVLLVEQDDLASGTS
                     SRSSKLIHGGLRYLEQYEFRLVREALAEREV"
BASE COUNT          416 a          811 c          844 g          383 t
ORIGIN      
        1 ccacgtagcg cgcgatcagg aacgctgccg cggcgcccgt ggtcgcgaaa aggagcacga
       61 gcggcacacc ccagagaccg aaggcgacgc ccgcggcgat cgacatcacc gagccgggcg
      121 cgagcagcag cgtcccgacg acataaagca acccgaacgc cacgaaggcc caggccccca
      181 ggctttcgat ccacctcgtg aaatcgttga tccagtcctc gatcggcagc agcgaccacg
      241 ccgcgatcgt cacgatcacg atcgcggcga gcgccagcca ggcgagatgc ttcgcgtcga
      301 ggcgaatgcc ggcaatggtc atgcgaccgg ctccggcacc gggcgcgtgg cggccgtgag
      361 cgccgcgaac agacgctgct gggacgccga cagcacgagc agctccggat gccactgcac
      421 gccgatcagg aagccggggc cggtgccctc ggtcgcctgt acgacgccgg cttcatcgcg
      481 cgccaccacg cgcagatccc gcccgagacg atccaccgac tggtgatgca gcgcattgac
      541 gcggcacggg tcgcatccgg tgatgcggta gagccggctg tcattctcga tatgcacggt
      601 cttgcgcggc agaaccgtgc gcatgcgcgg cgcgttgacg tagacctcgt agatgtcggt
      661 gtgcagcgtg ccgccgaggg ccacgttgat catctgcgag ccgcggcaga tgccgaggat
      721 cggcaggccc gcgggcaggg cggtgtcgag cagcttgagc tcgagcttgt cgcgttccgg
      781 atcgatgcgg atgtcgggca tcacctcgcc gccgtaaatc tccgcaccga tgtcgtcgcc
      841 gccgccgatc acgaggccgt cgagcttcgg aggcagctgg tcacccggaa caagacgcag
      901 cgcccgggcg cccgcccggg ccagggcgag acggtgcatc agaaagctgc gccatccgcc
      961 gagccgcgac gtcgtcactc cgatgatcgg ccgcgtcatg caaaagcgat cctctcggca
     1021 atgtccgccc agctcttcgc ctcgccctcg aaggcgcgat aggcgcggcc gagcgcatcc
     1081 agccggtcgc catcgaaggc gacgcgctcg accgccactc agcggttcca gtccggcgcg
     1141 atgctccagc cgggatcgct gatgcgggcg tcggggagac ggtaatgaaa agccgggcgc
     1201 ttgttgatct tctcgttggg aagccttgcg cgcacgcgcg gctcgtcgat ctgcgccagg
     1261 atcggcagca tgtcgagatc acggttgcgg gtggcgtttg cagcaagata gtcgtcgatg
     1321 aaggtggtca tatccggacg gtaatcgggc gcagcgatct ggcgcacgta gtcgggcgga
     1381 aacggatcgg caaaaccgag gaagtggcgg gtcgcgtcag gcgcgaccgc gcggcgcagc
     1441 cacgggttga gcaacgcaaa ggccttcacg atcgatgcaa tcgtctcgac atcgaggcgc
     1501 ggtgcctccg ggttgaaatg caggccgaac gcatacagcg cgccgtcctg ggtgcccctg
     1561 gcgccggcgt cgcgcagcac ggcaagcgca ccgtcgacct catgcagctt gtcaatcggc
     1621 accggcgccg tcaccagctc gcacgggatc acgtgccgca cggccgagcc gaaccaggaa
     1681 gcgaatttcg cgcccatcgt ctccagcaag gtcgtcgcct tgcggtccgg gtgaacatag
     1741 cgcatgtcca gctcgacggc gatgtcgccg agctttgagt tgcggaccgc gtaggcgtgc
     1801 ggatccttct gcctgacgcc gcctccgagg gcgagggaca gcgctttggc tgctgcctcg
     1861 gcggtgatgc cggcgaattc gacctcgacg ccgacggtcc gggtccgacc ttgcgcgttg
     1921 gtcaggacgg gcggacggtc gaacgcgatc agtttgtgct gggagaaggc cggctccgcc
     1981 atcgcgtgct ccatgtcctt ctttgaacga gtggcgtccg accgggttcc aacctcgcca
     2041 ggccccggcg gggtccggag aaccggcttt gaccttcgtc ctcattgcga gcgggtcgcc
     2101 ggattgcatg gatcgggccg cctatctgtc ggtgacatca tctttttcgg cccgatggtg
     2161 gccgctttgc gccatcatgc tttacatcgg agcttccgca gccgaatcga cggaggacgt
     2221 gcgcgacgcg atggccaatg caccttatga cctcctgatc gccggcggag gcatcaacgg
     2281 cgccgggatc gcgcgcgacg ccgcggggcg cgggctcagg gtcctcctgg tcgagcagga
     2341 cgatctggcg agcgggacct cgtcgcgctc gagcaagctg atccacggcg gattgcgcta
     2401 tctcgagcaa tacgagttcc gtctggtgcg cgaggcgctg gccgagcgcg aggt
//
LOCUS       DATAIQ010001094         3967 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_76869, whole genome shotgun sequence.
ACCESSION   DATAIQ010001094 DATAIQ010000000
VERSION     DATAIQ010001094.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3967)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3967)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3967
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_76869"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..747)
                     /locus_tag="VHN20_18085"
     CDS             complement(<1..747)
                     /locus_tag="VHN20_18085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009489451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TGS domain-containing protein"
                     /protein_id="HEX2727737.1"
                     /translation="MITLTFPDGAQRQFAPGTTGRAIVEGIAKSLAKRTVAMALDGRL
                     ADLDDAITSDAKIEFVSRDEPRALELIRHDAAHVLAEAVQTLYPGTQVTIGPVIENGF
                     YYDFARHEPFTPDDFPAIEKKMREIIGQDKPFTKESWSRDKAKQVFRDKGENFKVELV
                     DAIPEGEDLKIYRQGEWFDLCRGPHMTSTGKVGNAFKLMKVAGAYWRGDANNPMLTRI
                     YGTAWVDQAQLDQYLQMLEEAEKRDHRKLGR"
     gene            951..3620
                     /locus_tag="VHN20_18090"
     CDS             951..3620
                     /locus_tag="VHN20_18090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727738.1"
                     /translation="MATNIIIGVIVFALLVLWLRWGGVWDYLLRWLHVLWACRVSVVS
                     VLAGYLLMANVPQAQDVFADTSVGAAFWLLFFVLAFFIWALPVHYAARRMLDREEWAL
                     ANRLQGPARRAEQVRLINANERAIIWVPRLLGIACFGAIHLGMLFSRDNLAPAVRMDL
                     VAEARERITWLMIANAIMAVVFAWFVIRRSAMMRQVGVERAAEPLHLPGVPAGAIGIS
                     ESGPLWLERLLSPSYWRARAAGPASQFYADLFATSSVVIISGLFVLVFVDPLLVAERV
                     PRAAFLVFMLGAPVVGLTWVAAWSHRLRAPLLLMLAFTLTLIATFSPNFHDARQLPLR
                     GGDKAAQTAARQITLAAATARWMAANDCTMQDPQRCPSPIIVAGQGGASRAAFFTAGV
                     IGELLRTTRTDSRYRDFGRQLFALSTVSGSSLAAVMTRAALEDTVDPARGEAAWREGP
                     CGTAPDGVYFRSPRASAAAQMRASEMRQNWRACLQKLTAGDFLSPVFIGIAIRDLTSV
                     PKWFRGRDPWWQDRAILLERAWERRYAAIVTASKDAPASARHPDGLERRFGYLTAEGG
                     AAAHGSWIPLLFVNGSSVETGRRILSSDVRPWQCRTYPDGQRGVSSHLQEGYDLFEIV
                     GSGTNAPEQPQAPCAEPKLASSDGVVPRPVATASDQGADFRLSTIATMSARFPIISPP
                     GTLRNQDGNTVDRIIDGGFFENDGLATAADIADALIGEYGLRPAILHVTNEPLALHDG
                     DWRDPRPEPSPTLPDARELTWFQSISMPIKGLYETRSGHGNEAANVAVRLVEDHARNT
                     FCTGGASDCAVPAHYIRIAVYDSLMERKDSPTKLPKVSMSWWLSQPVQAYLDAQIEHP
                     RNRCSLALMAWHLTRRDAAGRAFTEPEACSSGG"
     gene            complement(3661..>3967)
                     /gene="yidD"
                     /locus_tag="VHN20_18095"
     CDS             complement(3661..>3967)
                     /gene="yidD"
                     /locus_tag="VHN20_18095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013501742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HEX2727739.1"
                     /translation="CSEYTDEAIGRHGVWAGGWMGFARICRCGPLGTSGIDLVCEEVP
                     PHARWYAPWRYGRWRGVNAPPDRHPAADASDTLAGDTIVDVSPPENQLLSARRGGRY"
BASE COUNT          600 a         1364 c         1299 g          704 t
ORIGIN      
        1 gcggccgagc ttacgatggt cgcgcttctc tgcctcttcc agcatctgca gatactggtc
       61 gagctgggcc tggtcgaccc aggccgtacc gtagatgcgc gtcagcatcg gattgttggc
      121 atcgccgcgc cagtaggcgc cggccacctt catcagcttg aaggcgttgc cgaccttccc
      181 cgtagaggtc atgtgcgggc cgcggcacag gtcgaaccac tcgccctgcc ggtagatctt
      241 caggtcctcg ccttcgggga tcgcatcgac gagctcgacc ttgaaattct cgcccttgtc
      301 gcgaaacacc tgcttggcct tgtcgcggct ccacgattcc ttggtgaagg gtttgtcctg
      361 cccgatgatc tcgcgcatct tcttctcgat cgccgggaaa tcatcgggcg tgaacggctc
      421 gtggcgcgcg aagtcgtaat agaagccgtt ctcgatcacc gggccgatgg tgacctgcgt
      481 gccgggatag agcgtctgca ccgcctcggc gaggacgtgc gccgcgtcgt ggcggatcaa
      541 ttcgagcgcg cgcggctcgt cgcggctcac gaactcgatc ttcgcatcgc tcgtgatcgc
      601 atcgtcgagg tcggcgaggc gtccgtcgag cgccatggcg acggtgcgct tggcaagcga
      661 cttggcgatg ccctcgacga tcgcccggcc ggtggtgccg ggggcgaact ggcgctgcgc
      721 gccatcggga aatgtcaggg tgatcatcaa gaactcctgg ctcactcctg caaacgaggc
      781 aggtaagcgg gttgggggat gctggcttta atcgatttgg gttgccggga gcaacccggc
      841 ggttcagacc tgccgaagga ggtgtgtgaa gccgctcaca tggggggcgg tttagatagg
      901 gatacgtttc acaccggatt tccatttggt taaaccctgc cgagcccgcg atggcgacca
      961 acatcatcat aggcgtgatc gtttttgcct tgctggtgct gtggcttcgc tggggcggcg
     1021 tgtgggatta cctgctgcgc tggctgcatg tcctgtgggc ctgccgggtg agcgtcgtca
     1081 gcgtccttgc cggctacctc ttgatggcca acgttcctca agcccaggac gtcttcgccg
     1141 acacctcggt gggcgctgcc ttctggcttc tgttcttcgt cctcgccttc ttcatctggg
     1201 ccctgccggt ccactacgcc gcccgccgca tgctcgatcg ggaggaatgg gcacttgcga
     1261 accggctgca ggggccggcg cggcgcgcgg aacaggtgcg cctgatcaat gccaacgagc
     1321 gcgccatcat atgggtgccg cgtctcctgg gcatcgcctg tttcggcgcc atccatcttg
     1381 gcatgctgtt ctcgcgcgac aacctggcgc cggccgtccg catggatctg gtcgccgagg
     1441 cgcgcgagcg catcacatgg ctgatgatcg ccaacgccat catggctgtc gtgttcgcct
     1501 ggttcgtgat ccggcgctcc gcgatgatgc ggcaggtcgg cgtcgagcgg gcggcggagc
     1561 ccctgcacct gccgggcgtg cccgcgggcg cgattggtat cagcgagagc ggcccgctct
     1621 ggctcgagcg tctgctcagc ccgtcctact ggcgggcgcg cgctgccggg ccggcctcgc
     1681 aattctatgc cgacctgttc gcgacaagct cggttgtgat catctccggt cttttcgtgc
     1741 tcgtcttcgt cgatccgctc ctggtcgcgg aacgcgtgcc gcgcgccgcg tttctggtct
     1801 tcatgctcgg cgcccccgtc gtgggcctca cttgggttgc ggcctggtcg cataggctcc
     1861 gcgcccctct gctgctcatg ctcgccttca cgctcaccct gatcgcgacc ttttcgccga
     1921 acttccacga cgcgcgccag cttccgctgc gcggcggtga caaggccgcg caaacggccg
     1981 cccgccagat caccttggcg gcggcgaccg cccgctggat ggcggccaat gactgcacca
     2041 tgcaggatcc gcaacggtgc ccgagcccga tcatcgtcgc aggccagggc ggcgcgagcc
     2101 gtgcggcctt tttcaccgca ggcgtcatcg gcgagctcct gcggacgacg cgcaccgaca
     2161 gccgctaccg tgacttcgga cggcagctct tcgcgctgtc gacggtgtcc ggaagctcgc
     2221 tcgccgcggt catgacgcgc gccgccctcg aagataccgt cgacccggcc aggggcgaag
     2281 ccgcgtggcg cgaagggccg tgcggcaccg cgcccgacgg cgtgtatttc cgctcgccgc
     2341 gcgcctccgc ggcggcgcag atgcgagcat ccgagatgcg ccagaactgg cgcgcctgcc
     2401 tgcagaagct gaccgccgga gattttctgt cgccggtctt catcggcatc gccatccggg
     2461 atctcacatc cgtgccgaaa tggttccgag gacgtgatcc ttggtggcag gaccgggcga
     2521 tcctgctcga gcgcgcctgg gaacgccgct acgccgccat cgtcacggcc agcaaggacg
     2581 ccccggcgag tgcacgccat ccggacgggc tcgagcgccg gttcggctat ctcacggctg
     2641 aaggaggcgc cgccgcccac ggcagctgga ttccgctgct gttcgtgaac ggatcatcgg
     2701 tcgagaccgg ccgccgcatc ctgtcctcgg acgtcaggcc atggcaatgc cggacatatc
     2761 cggatgggca gcgcggcgtg tcgagccacc tccaggaagg ctacgacctg ttcgagatcg
     2821 tcggcagcgg gaccaacgcg ccggagcagc cgcaggcccc ttgcgcggaa cccaaacttg
     2881 cgtcgagcga cggcgtcgtt ccccgcccgg tggccaccgc gtctgatcag ggcgccgatt
     2941 tccggctgtc gacgatcgcc acgatgagcg cccggttccc gatcatctct ccgcccggaa
     3001 ccttgcgcaa tcaggacggc aacaccgtcg atcgcatcat cgacggcggg tttttcgaga
     3061 atgacgggct cgccacggcc gccgacatcg ccgacgcgct tatcggcgaa tacggattgc
     3121 ggccggcgat cctgcacgtc accaacgagc ccctcgcgct gcacgacggc gactggcgcg
     3181 atccgcggcc ggagccctcg ccgaccctgc cggacgcccg ggaactgacg tggttccagt
     3241 cgatctcgat gccgatcaag ggcctttacg agacgcgcag cggccacggc aacgaggcgg
     3301 cgaacgtggc cgtccggctg gtcgaggacc atgcccgcaa cacgttctgc accggcggcg
     3361 ccagcgactg tgcggtgccg gcgcactaca ttcggatcgc cgtctacgac agcctcatgg
     3421 aacgcaagga cagcccgacc aagctgccga aagtatcgat gagctggtgg ctgtcacagc
     3481 ccgtccaggc ctatctcgat gcccagatcg agcatccgcg caaccgatgc tccctggccc
     3541 tgatggcctg gcatctgacc aggcgcgacg cggccggccg cgccttcacc gagccagagg
     3601 cgtgcagctc cggcggctga ccgaaaaaat ccaggccgac ggtaggcaca cctagaagcc
     3661 tcagtagcgg cccccgcgcc gcgccgagag cagctgattt tctggagggg agacgtcgac
     3721 gatggtgtcg ccagccaatg tgtcggacgc atccgctgcc gggtgccgat caggcggcgc
     3781 attgacgccg cgccagcggc cgtagcgcca cggcgcgtac cagcgcgcgt gcggcggcac
     3841 ctcctcgcag acgagatcga taccgctcgt gccgagcgga ccgcagcggc agatgcgcgc
     3901 aaaacccatc cagccgccgg cccaaacgcc gtgccgaccg attgcctcgt ccgtgtactc
     3961 cgagcag
//
LOCUS       DATAIQ010001095         4839 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_364085, whole genome shotgun sequence.
ACCESSION   DATAIQ010001095 DATAIQ010000000
VERSION     DATAIQ010001095.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4839)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4839)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4839
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_364085"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1783
                     /locus_tag="VHN20_18100"
     CDS             <1..1783
                     /locus_tag="VHN20_18100"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX2727740.1"
                     /translation="RARSTGPSIRMLARFSARSRPVAHEPDPALDPQIASPASEPALA
                     DATLKAQAAPLFDQIEEDLRALVRGVQEASTEVGRAVQEANASLNGIQARTRGLSAQT
                     EQVNATATVLAGATEELAKSSDNVSRQVHDATGLVTQAADKARRAQEQIGQLRLSSDE
                     IGTVVELIAGIAKQTNLLALNAMIEASRAGEHGRGFAVVAQEVKTLSLQTQKATDQIR
                     ERIKRLQGDAGLSAVTVEGISDLVTSIEPKFGEIAAAVTQQNASTGELSRSAGTVAAF
                     VADVSRSAATIEQEALAASAVSSAAGHSAQAIDRLFTRVLVVLRGNELGDRRSHARMP
                     IALRTTVRYGGRLLEARTIDISRGGFLLGPVEGLEAAVGTRLEVDAERLGRIAVRVVG
                     RSALGHHLQVVDASAELLARLDELIAAFARENDALITAIQSAAGEIEDALEAAIRAGR
                     LSEDDLFDTSYQPIADTAPQQFLTRATIALENILTPIQERWLASDGRVVFCAAVDRNG
                     YLPVHNRKYSQPQRAGDLAWNTPNCRNRRMFDDRAGLSAARNTHPFLIQSYARDLGGK
                     TVLMKEVDAPIRVNGRQWGGVRMAYAL"
     gene            complement(1898..2530)
                     /locus_tag="VHN20_18105"
     CDS             complement(1898..2530)
                     /locus_tag="VHN20_18105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009209234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HEX2727741.1"
                     /translation="MIDLYTWTTPNGRKVSILLEELGLPYTAHAVNIGENEQFAPDFL
                     KISPNNKIPAIVDRDTGTALMESGAIMLYLADKAGRLIPRDGEPRYRVIEWLMWQMGG
                     LGPMLGQTHHFLRQNKGVAPYAEERFSKEAHRLYGVLDRRLADREFVADGLSVADIAM
                     WPWVSRFEWQSVDLRQYPNVLRWYKDIARRPAVQRGYDIPKKVGDIPMPV"
     gene            complement(2568..3353)
                     /locus_tag="VHN20_18110"
     CDS             complement(2568..3353)
                     /locus_tag="VHN20_18110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012649205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX2727742.1"
                     /translation="MAATSLLSAKSSGVLSPVARVRITIILVALLAWEALAASGLLFQ
                     DVVPSFVKIGAALAKIVADPAFYRNLGATAYEVFWALLVGGVTGLAAGIVLGGSRFLS
                     RAYEPFLYYLGPTPKIIFFPVMIMWFGVGPGSKIAMGAVSCFFPVALSAAAGMREVDK
                     VLIRVGRSFRANTQQMVTKIYLPAMRAPIINGVRLGMGVAIIGVLLAETKLSNQGLGF
                     MIIQAYTLFNMPQMYALLIIVFVIAALINAGIDRLNRSTAPGR"
     gene            complement(3332..4105)
                     /locus_tag="VHN20_18115"
     CDS             complement(3332..4105)
                     /locus_tag="VHN20_18115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009208392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX2727743.1"
                     /translation="MSAALAPTRLVLRPAVVGLASFAAVIVLVEILIRAGLINRYIVP
                     LPSAIVLSFWRVITEEHVLSRFLLTAGEALSAALLITVAGVPTGVVMQRISVLRRACE
                     TWVAAFAAAPIVLAYPLFLVIFGRNALTIVMIGFVAGLAPVILKTIEGLAGVRPVLIN
                     VGRSLKLTPVQRFWKIEFPAAMPTIFTGLRLGLIFSLITIVGVEFLINFGGLGQLIND
                     LAERYDLPGTYAAICFVVLVSVAIFSVLERLERWLRPAS"
     gene            complement(4102..>4839)
                     /locus_tag="VHN20_18120"
     CDS             complement(4102..>4839)
                     /locus_tag="VHN20_18120"
                     /EC_number="7.6.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007770168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2727744.1"
                     /translation="DHMSFDVAPGEFLSLIGPSGCGKSTLFNIVGGLLGGYEGRVTIG
                     GEAISGPHPAIGMVFQEESTFPWRTLLDNVAFPLEIKGISKTERLERARHFVRLVGLD
                     GFERRYPAELSGGMRQRVSIARTLAFEPKILLMDEPFGALDEQTRLLLGDKVTEIQQA
                     LHQTTLLITHSITEAVQLSDRIVVMTYRPGRVKRIISIDLPRPRTSEIVSSEAFGHYV
                     AEIWSDLREEASRGLIESEARGRRSAS"
BASE COUNT          867 a         1586 c         1655 g          731 t
ORIGIN      
        1 tcgggcgaga tctaccggac catcgattcg catgctggcc cgcttctccg ctcgttcgcg
       61 ccctgtcgcg catgaacccg atccggccct tgatccgcag atcgcgagcc cggcgtccga
      121 gccggctctc gcagacgcga cgctcaaggc gcaggccgct cccctgttcg accaaatcga
      181 ggaggacctg cgcgcccttg tgcgcggcgt gcaggaggcc tcgaccgagg tcggccgcgc
      241 cgtgcaggag gcgaatgcgt ccctcaacgg catccaggcg cgaacgcggg ggctgtccgc
      301 tcagacggaa caagtgaacg ccacggcgac cgtcctggcc ggcgcgacgg aggagctcgc
      361 gaaatcgtcg gacaatgtca gccgccaagt ccacgacgcc actgggctag tcacgcaggc
      421 cgccgacaag gcgcggcgcg cgcaggagca gatcggtcag ctccggctct cctcggacga
      481 gatcggcacg gtcgtcgagt tgatcgcagg catcgccaag cagaccaacc tgctcgcgct
      541 gaacgcgatg atcgaggcct cgcgcgccgg cgagcacggc cgcggctttg cggtcgtcgc
      601 gcaagaggtc aagaccctgt ccctgcagac ccagaaggcc acagatcaga tccgcgagcg
      661 catcaagcgc ctgcaaggcg acgcgggttt gtcggccgtg acggtcgagg ggatcagcga
      721 cctcgtgacg tcgatcgaac cgaaattcgg cgagatcgcc gctgcggtca cccagcagaa
      781 cgcgtcgact ggcgagttgt cgcggtcagc cggaaccgtc gccgccttcg tggccgacgt
      841 gtcgcgcagc gcggcgacca tcgagcagga ggcgcttgcg gcaagcgccg tgagctccgc
      901 ggccgggcat tcggcgcagg cgatcgatcg cctgttcacc cgcgtgctgg tggtgctgcg
      961 cggcaacgag ctcggcgacc ggcgcagtca cgcgcgcatg ccgatcgcgc tacgcacgac
     1021 cgtccgctat ggcggcaggt tgctcgaggc gcgcacgatc gatatcagcc gcggcggttt
     1081 cctgctcggg cccgtcgagg ggctcgaggc agccgtcggc acgaggctcg aggtcgacgc
     1141 ggagcgcctc gggcgtattg ccgtgcgggt cgtcggccgc agcgccctcg gccaccatct
     1201 gcaggtcgtc gacgcgtccg cggaactcct ggcgcggctc gacgagttga tcgccgcctt
     1261 cgcgcgcgag aatgacgccc tgatcacggc aatccagtcg gcggcgggcg agatcgagga
     1321 cgctctcgag gctgccattc gggcagggcg cctcagcgag gatgaccttt tcgatacgtc
     1381 ctaccagccg attgccgata ccgcgccgca acagtttctc acccgcgcga caatcgcgct
     1441 ggaaaacatc ctgacgccga tccaggaacg gtggctcgca agcgacggac gggtcgtctt
     1501 ctgcgccgcc gtcgaccgca acggttatct gccggtgcac aaccgcaaat actcgcagcc
     1561 gcagcgggcc ggcgatctcg cctggaacac gcccaactgc cgcaaccgcc gcatgttcga
     1621 cgatcgcgcg ggcctgagcg cggcccgcaa cacgcatccg tttctcatcc aatcctatgc
     1681 gcgcgacctc ggcggcaaga ccgtgctgat gaaggaggtg gatgcgccca tccgcgtcaa
     1741 cgggcggcaa tggggcggcg tccgaatggc ctacgccctc tgacgtcgcg cggcgctgcg
     1801 cggacgtcgc acatagatgt ggacgtgtcg atggtcgcgc ggcgtcggag agttcgcggg
     1861 catgattacc gcgcgctggt ccaaacgcgc cggtccttca aacaggcata gggatgtcgc
     1921 cgaccttctt cggaatgtcg tagcccctct gcacggcggg gcgccgggcg atgtccttgt
     1981 accaacgcag cacgttcgga tactgccgca gatcgacgct ctgccactcg aagcgcgaca
     2041 cccagggcca catcgcgatg tccgcaacgg acagaccatc tgcaacgaat tcgcggtcag
     2101 cgaggcggcg gtcgaggacg ccgtataacc tgtgcgcctc cttcgagaac cgctcctccg
     2161 cgtagggcgc cacacctttg ttctggcgca ggaaatggtg ggtttggccg agcatcgggc
     2221 ccaatccgcc catttgccac atcagccatt cgatcacgcg gtaacgcggc tccccgtcgc
     2281 gcgggatgag ccgtccggct ttgtcggcca ggtacagcat gatcgcgccg gactccatga
     2341 gcgccgtgcc cgtgtcgcgg tcgacgattg ctggaatctt gttgttcgga ctgatcttca
     2401 gaaagtccgg cgcgaactgc tcgttctcgc cgatgttcac cgcatgggcc gtgtacggca
     2461 ggccaagctc ctcgagaaga atggagacct tgcgcccgtt gggggtcgtc caggtgtaga
     2521 gatcgatcaa ggcttcacct tcacggttgc tgatcacaga cgatcagtca tcggcccggc
     2581 gcggtcgagc gattgaggcg gtcgatgccg gcattgatca gcgccgcgat cacgaagacg
     2641 atgatcagga gcgcatacat ctgcggcatg ttgaacagcg tataggcctg gatgatcatg
     2701 aagccgaggc cctgattgga gagcttggtc tcggcgagca gcacgccgat gatggcgacg
     2761 cccatgccga gacggacgcc gttgatgatc ggcgcgcgca tcgccggcag gtagatcttg
     2821 gtgaccatct gctgcgtgtt ggcgcggaag ctgcggccga cgcggatcag caccttgtcg
     2881 acctcgcgca tgccggcggc ggcgctcagc gccaccggga agaagcacga cacggcgccc
     2941 atggcgatct tggagccggg gccgacgccg aaccacatga tcatgaccgg aaagaagatg
     3001 atcttgggcg tcgggccgag atagtagagg aacggctcgt aggcacgcga cagaaagcgg
     3061 ctgccgccga gcacgatgcc cgcggcgagg cccgtgacgc cgccgaccaa cagcgcccag
     3121 aacacctcgt aagcggtggc gccgaggttg cggtagaagg ccggatccgc gacgatcttg
     3181 gccagcgccg cgccgatctt gacgaacgag ggcacgacgt cctggaacaa aaggccggag
     3241 gcggcgagcg cctcccaggc gagaagcgcc acgaggatga tcgtgatgcg tacgcgcgcg
     3301 acggggctca gcacgccgct gcttttggcg ctcaggaggc tggtcgcagc catcgctcga
     3361 gcctttcgag aacggaaaaa atcgccacgc tgaccaggac cacgaagcag atcgccgcgt
     3421 aggtgccggg aaggtcgtag cgctcggcga gatcgttgat cagttggccg aggccgccga
     3481 aattgatcag gaactcgacg ccgacgatcg tgatcaggct gaagatcagg ccgagccgca
     3541 ggccggtgaa gatggtcggc atggcggccg ggaactcgat cttccagaag cgctgcaccg
     3601 gggtgagctt caggctgcgc ccgacattga tcagcaccgg cctgaccccg gcgagaccct
     3661 cgatcgtttt caggatcacc ggcgccaggc cggcgacgaa gccgatcatg acgatggtga
     3721 gcgcgttgcg gccgaagatc acgagaaaaa gcggataggc gagcacgatc ggcgcggccg
     3781 cgaaggcggc gacccaggtc tcgcaggcgc gccgcagcac gctaatgcgc tgcatcacga
     3841 cgccggtcgg cacgcccgcc acggtgatca gcagcgccgc gctgagcgcc tctccggcgg
     3901 ttaggaggaa gcgcgagagc acgtgctcct cggtgatcac gcgccagaag ctcaggacga
     3961 tcgccgaggg caggggcacg atgtagcggt tgatcaggcc ggccctgatc aggatctcga
     4021 ccagcacgat aacggccgcg aagctcgcga gcccgacgac cgccggccgc agcactaagc
     4081 gggtcggcgc cagcgcggcg ctcacgacgc gctccgccgg ccgcgcgcct cagactcgat
     4141 gaggccgcgg ctcgcttcct cgcgcaggtc gctccagatc tcggcgacgt aatgcccgaa
     4201 agcttcgctg ctgacgatct ccgacgtgcg cgggcgaggc agatcgatgc tgatgatgcg
     4261 cttcacccgg cccggccggt aggtcatcac gacgatgcgg tcggacagtt gcacggcttc
     4321 ggtgatgctg tgcgtgatca ggagcgtcgt ctggtgcagc gcctgctgga tctcggtgac
     4381 cttgtcgccg agcagcaggc gcgtctgctc gtcgagagcg ccgaacggct cgtccatcag
     4441 aaggatcttg ggctcgaagg cgagcgtgcg cgcgatcgag acgcgctggc gcatgccgcc
     4501 ggacagctcg gccggatagc gccgctcgaa gccgtcgaga ccgacgaggc gcacgaaatg
     4561 gcgcgcgcgc tccagccgct cggtcttgga gatgcccttg atctcgagcg ggaaggcgac
     4621 gttgtcgagc agcgtgcgcc aggggaaggt cgattcctcc tggaacacca tgccgatggc
     4681 gggatgcggg ccggagatcg cctcgccgcc gatcgtcacg cggccctcgt agcccccgag
     4741 caggccgccg acgatgttga acagcgtcga ctttccgcag ccggatgggc cgatcaggga
     4801 caggaactcg cccggcgcca cgtcgaagga catgtggtc
//
LOCUS       DATAIQ010001096         5387 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_364326, whole genome shotgun sequence.
ACCESSION   DATAIQ010001096 DATAIQ010000000
VERSION     DATAIQ010001096.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 5387)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5387)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5387
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_364326"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..910)
                     /locus_tag="VHN20_18125"
     CDS             complement(<1..910)
                     /locus_tag="VHN20_18125"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0042908 - xenobiotic transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Bcr/CflA family efflux MFS transporter"
                     /protein_id="HEX2727745.1"
                     /translation="MPDSVRRPPMAVLIAISALQPFALNVLAPALPGLARSLATDYAT
                     IQLTLTLYLVVVAVVQLVIGPVSDQVGRRPCILAGIALFMAGSLIGAVATDIPTLLLA
                     RVVQAMGGGTCFALARAVVRDVASKDEAASLIGYIAMVMVLSPMVAPLVGGLIDAHFG
                     WRSIFVVMLALAAPVAVAAWWRLHETARSRGQGSTRTVFAAFPLLLRNRLFVGYALSL
                     AFTTAGFFTLIGGAPYVVVEAMGSSPTVYGAFFIANGVGYMVGNFLSGRYGQRIGSER
                     LIVIGTALSLFSTLIELPFVIFGYWTP"
     gene            complement(916..1875)
                     /locus_tag="VHN20_18130"
     CDS             complement(916..1875)
                     /locus_tag="VHN20_18130"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEX2727746.1"
                     /translation="MWAARNGRNESLNSSGHPLHQSAANRRGIIAMLAAMTFFVFGDT
                     VLKLAAAAYPPGQIMAVRGAFAVLITLSFIAATGQLRELHRTFSRLVMLRAVLEAAIA
                     FLFITGVAVLPLANITAILQATPIILTFMTVVLGIEQVGWRRWSAILCGFAGVLLVVK
                     PSPAAFDIYALLALACAALVAARDLVTRSIGTFVPSSVITFSTTLAVAVAGVFVGISE
                     GWQPVGASEAALLFAAAVLVTLGNATIVMAFRGTDVSVVSPFRYSNVPFAIVLGFLVF
                     GELPDVIAFAGIALIIVSGIYTLHREQVRQREARALAPANPPA"
     gene            1968..3749
                     /locus_tag="VHN20_18135"
     CDS             1968..3749
                     /locus_tag="VHN20_18135"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX2727747.1"
                     /translation="MRQLPALAAFRRKPLAIEFEPPDAADSWRGTRSGDDAEAVAVAG
                     AALAAEVADALERDIVGGINAVAKGVNATTGGIRAAGDDLAEIRSRIDELAAAGKGAA
                     KEAVGLAAATHELAGASHAVTRAVDAAAAQLRDAVSSAHGARAVVTDLGSAIEEIAGI
                     LVTISAVARQTNLLALNATIEAARAGPAGRDFVLVANDIKSLSVETGNAATEIQARIA
                     RLRECAGSSVRVVEKVVSEIEEAQPLVDTVCTAVARQNGALGQLAEQSATTAATAERL
                     SGSLRELNAGAHGPGRRITQAAQTAANAETLANGLAQRFVTIVRQTDGADRRRHDRYP
                     VDLTVTLATAGRSVVTRTVDISAGGVLIAPADGLAEVVGSAVDFDLEPVGRLCARVVA
                     VSAMGLHCAFDHLDPAAQDGLTELMANIEDEYRPLIATVTNAARQIEAAFEHASRNGR
                     LSREQLFDTKYRPIPGTNPPQYGTAYAQVLEDLLPGIQEPLLLSDDRISFCFASDRNG
                     YVPVHNRQYAQPQRPGDLAWNSVNSRNKRIFDHRTDLIAARSSRPFVIQSSTHEVAGR
                     MVVLREIAVPIRVFDRHWGAFRTAYHF"
     gene            complement(3795..4856)
                     /gene="moaA"
                     /locus_tag="VHN20_18140"
     CDS             complement(3795..4856)
                     /gene="moaA"
                     /locus_tag="VHN20_18140"
                     /EC_number="4.1.99.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP 3',8-cyclase MoaA"
                     /protein_id="HEX2727748.1"
                     /translation="MALTVNDPDTPPAGDPSRNTGPAPLIDPFARPITYLRVSVTDRC
                     DFRCVYCMAEDMTFLPKRDLLTLEELDRVCTVFVEKGVRKLRITGGEPLVRRDIMSLF
                     RSLSRHLGSGALDELTVTTNGSQLARYAGELAECGVRRINVSLDTLDADRFRRITRWG
                     DLAKVMAGIDAAQQAGLQIKINTVALKGVNEDEIEALIEWAHGRAMDLTLIEVMPLGD
                     IEPQRIDQFLPLSLVRARLGERYTFEDLDYRTGGPARYVRVNETGGRLGFITPMTHNF
                     CESCNRVRLTCTGTLYMCLGQEDAADLRSPLRMSEANERLEQAIEDAIARKPRGHDFI
                     IDRRRNRPAVGRHMSVTGG"
     gene            4944..5324
                     /locus_tag="VHN20_18145"
     CDS             4944..5324
                     /locus_tag="VHN20_18145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF971 domain-containing protein"
                     /protein_id="HEX2727749.1"
                     /translation="MESKRWPTEIRLARDKRTLRVTFEDGAAFDLSAEYLRVMSPSAE
                     VQGHSPSERKTVPGKSRVEIIGVQPVGNYAVKLVFDDMHDTGIYGWDYLYELGAGHSE
                     RWANYLAELDAKGLSREPTGRRAS"
BASE COUNT          973 a         1835 c         1814 g          765 t
ORIGIN      
        1 cgggcgtcca gtagccgaag atcacgaagg gcagctcgat cagcgtggag aacagcgaca
       61 gggccgtgcc gatcacgatc aggcgttcgc tgccgatgcg ctggccgtag cggccggaga
      121 ggaaattccc caccatgtag ccgacgccgt tggcgatgaa gaatgcgcca tagactgtcg
      181 gcgagctgcc catcgcctcg accacgacat agggcgcgcc gccgatcagg gtgaagaagc
      241 ccgccgtggt gaaggccagc gacagcgcat atccgacgaa caggcggttg cgcagcaaca
      301 gcggaaacgc ggcgaagacc gtgcgggtgg agccttgccc ccgcgaccga gccgtctcgt
      361 gcagccgcca ccacgccgcc accgcgaccg gcgcggcgag ggcgagcatc acgacgaaga
      421 tcgagcgcca gccgaaatgc gcgtcgatga ggccgccgac cagcggcgcc accatcggcg
      481 acagcaccat caccatggcg atgtagccga tcaggctggc cgcctcgtcc ttcgacgcca
      541 cgtcgcgcac gacggcccgc gccaacgcaa agcaggtgcc tccgcccatc gcctgaacga
      601 cgcgcgccag cagcagcgtc gggatgtcgg tcgcgaccgc cccgatcagc gatccggcca
      661 tgaacagggc gatgcccgcg aggatgcagg gacgacggcc gacctggtcg gacaccggac
      721 cgatgaccag ctgcaccacc gcaaccacga ccagatacag cgtgagcgtc agctggatgg
      781 tcgcatagtc ggttgcgagc gagcgcgcga ggcccggcag ggcgggcgca agcacgttga
      841 gcgcaaaagg ctggagcgcc gagatggcga tcagcacggc catgggcggc cgccgcacgg
      901 aatcgggcat gctgctcacg ccggcgggtt cgccggcgcc aacgcgcgcg cttctcgctg
      961 ccgcacctgt tcgcggtgca gggtatagat gccgctgacg atgatcaggg caatgccggc
     1021 gaaagcgatg acgtccggaa gctccccgaa gacgaggaag ccgagcacga tggcgaaggg
     1081 cacgttgctg tagcggaacg gcgacaccac ggagacgtcg gtcccgcgaa acgccatcac
     1141 gatggtcgcg ttgccgagcg tcaccaggac cgccgccgcg aacagaagcg ccgcctcgga
     1201 tgcgccgacc ggctgccagc cttcggagat ccccacgaaa acgccggcga cagcaaccgc
     1261 cagagtggtc gagaaggtga tcacgctcga gggcacgaag gtgccgatcg agcgggtgac
     1321 cagatcgcgc gccgccacca gcgccgcgca cgccaatgcg agcagggcat agatgtcgaa
     1381 tgccgcgggg ctcggtttca cgaccagcag cacgccggcg aacccgcaca ggatcgcgct
     1441 ccagcgccgc catccgacct gctcgatacc gaggaccacc gtcatgaagg tgaggatgat
     1501 cggcgtggcc tggaggatcg ccgtgatgtt ggcgagcggc aggaccgcga cgcccgtgat
     1561 gaacagaaag gcgatggctg cctccagaac ggcccgcagc atcacgagcc gggagaacgt
     1621 gcggtgcagc tcacggagct gtccggttgc ggcaatgaaa ctcaaggtga tgagaaccgc
     1681 aaaggcgccg cggaccgcca tgatctgccc gggcgggtag gctgcagcgg ccagcttcag
     1741 caccgtgtcg ccgaacacaa agaacgtcat ggcggccagc atcgcgatga tgccgcggcg
     1801 gtttgctgca gattggtgca aggggtggcc cgaggaattc agagactcgt tacgtccgtt
     1861 tcgagccgcc cacaaggata agtgcgcgcg ccgccgggtc gcgccgccgc ccttaacagc
     1921 ccgttaactt taagcccgga aacatgggcg cgaattccca gctccgcatg cgacagcttc
     1981 ctgccctagc cgcattccgc cgaaaacctc tcgccatcga gttcgagccg ccggacgcgg
     2041 ccgattcgtg gcgtgggaca cgttccggcg acgacgccga ggccgtggcg gtggccgggg
     2101 ccgccctcgc ggccgaggtg gccgatgcgc tcgagcgcga catcgtcggc ggcatcaatg
     2161 cggtggccaa gggcgtcaac gcgacgaccg ggggcatcag ggcggcgggc gacgacctcg
     2221 ccgaaatccg ctcacgcatc gacgagctcg cggcggcagg aaaaggcgct gccaaggagg
     2281 ccgtcgggct cgcggcagcg acccatgagc ttgccggcgc gtcgcacgcc gtcacgcgcg
     2341 ccgtcgacgc cgccgcggcg cagctgcggg acgccgtctc ctccgcgcac ggcgcccgcg
     2401 cggtcgtgac agatctgggc agcgcgatcg aagagatcgc ggggattctc gtcacgatct
     2461 ccgcggtcgc gcggcagacc aacctgctgg cgctcaacgc caccatcgaa gcggcccggg
     2521 ccgggccggc ggggcgcgat ttcgtgctcg tggccaacga catcaaatcc ctgtccgtag
     2581 agaccggcaa cgcggccact gagatccagg cccgcatcgc caggctgcgt gaatgcgccg
     2641 gctcgtccgt gcgcgtggtc gaaaaggtcg tctcggagat cgaggaggcg caaccgcttg
     2701 tcgacacagt ctgcaccgcc gtcgccaggc agaatggggc gctgggacag cttgcagagc
     2761 agagcgccac caccgccgcc acggcggagc ggctcagcgg cagccttcgc gagctcaacg
     2821 ccggtgccca cgggccgggc cgccgcatta cgcaggccgc gcagacggcg gccaacgccg
     2881 aaactctggc caacggcctc gcgcaacgat tcgtgacgat cgtgcggcag accgacggtg
     2941 ccgaccgccg ccgtcacgac cgctatcccg tcgacctgac cgtcaccttg gcgacggctg
     3001 gccgttcggt ggtcacgcgg acggtcgata tcagcgccgg aggcgtgctg atcgccccgg
     3061 ccgacggtct cgccgaagtt gtcggctcgg ccgtcgattt cgatctcgag cctgtcggcc
     3121 ggctttgcgc gcgcgtcgtc gcggtaagcg ccatggggct gcactgcgcg ttcgaccatc
     3181 tcgatcctgc ggcgcaggac ggcctcaccg agctgatggc caatatcgag gacgagtacc
     3241 ggccgctgat cgcgaccgtc accaacgcgg cccgacagat cgaggctgcg ttcgagcacg
     3301 ccagcaggaa cggccgcctc tcgcgcgaac agctgttcga cacgaaatac cggccgatcc
     3361 cgggcaccaa cccgccgcaa tacggaaccg cctacgcgca ggtgctcgag gatctgttgc
     3421 cgggcatcca ggagcccctg ctgctttccg acgatcgcat atcgttctgc tttgccagcg
     3481 accgcaacgg ctacgtcccg gtgcacaatc gccaatacgc acagccgcag cgtcccggcg
     3541 atctggcgtg gaacagcgtc aactcacgca acaagcggat tttcgatcac cgcaccgatc
     3601 tgatcgcggc gcgctcgagc cgacccttcg tgatccagtc gtcgacccat gaagtcgccg
     3661 gacgcatggt cgtcctgcgc gagatcgccg tgcccatccg cgtcttcgat cgccactggg
     3721 gcgccttccg caccgcctac catttctgaa cgcgcggcgc tgccccgggc aggcgtgccg
     3781 gacctggctg caggtcagcc gccggtcacg ctcatgtggc ggccgacggc cgggcggttg
     3841 cgccgccggt cgatgatgaa gtcgtgcccc cggggcttgc gcgcgatcgc gtcctcgatc
     3901 gcctgttcca ggcgctcgtt ggcttccgac atccgcaacg ggctgcgcag gtcggcggcg
     3961 tcctcctggc cgaggcacat atagagcgtg cccgtgcagg tgagccgcac gcggttgcag
     4021 ctttcgcaga aattgtgggt catcggcgtg atgaagccga gccgtccgcc ggtttcattg
     4081 acccgaacat agcgggccgg gccgccggtg cggtagtcga gatcctcgaa cgtatagcgc
     4141 tcgccgagcc gggcgcggac gagcgacaac ggcaggaact ggtcgatgcg ctgcggctcg
     4201 atatcgccga gcggcatcac ctcgatcagc gtcaggtcca tggcgcggcc atgggcccac
     4261 tcgatcaggg cctcgatctc gtcctcgttg acccccttca gggcgaccgt gttgatcttg
     4321 atctgcagcc cggcttgctg ggcggcgtcg atccctgcca tcaccttggc gagatcgccc
     4381 cagcgggtaa tgcgcctgaa gcggtccgcg tcgagggtat ccagggagac gttgatccgt
     4441 ctgacgccgc actcggcgag ctcgccggcg taacgggcca gctgcgagcc gttggtggtc
     4501 accgtcagct cgtccagggc gccgcttccc agatgccggg acagcgaccg gaacaggctc
     4561 atgatgtcgc ggcgcaccag cggctcgccg cccgtgatgc gcagcttgcg cacgcctttc
     4621 tcgacgaaca ccgtgcagac ccgatcgagc tcctcgaggg tcagaaggtc ccgcttcggc
     4681 aggaaggtca tgtcttccgc catgcaatag acgcagcgga agtcgcagcg gtccgtgacc
     4741 gagacgcgca gataggtgat ggggcgtgcg aaagggtcga tcaacggcgc cgggccggtg
     4801 tttcgcgaag ggtcgcccgc cggcggggtg tcagggtcgt tcacggtaag agccatcgct
     4861 atatcgatag gttcgcagac ccggctttgc acctgtattt cgcgatggga atgggtctga
     4921 ccgggccttc tgaagaggaa tccatggagt cgaaacgctg gccgaccgaa atccgcctcg
     4981 ccagggacaa acgcaccctc cgggtcacat tcgaggacgg ggccgccttc gacctctccg
     5041 ccgaatacct gcgggtgatg agcccatccg ccgaggtcca gggccacagc ccctcggagc
     5101 gcaagaccgt cccgggcaag agccgggtcg agatcatcgg cgtgcagccg gtcggcaact
     5161 atgccgtcaa gctcgtcttc gacgacatgc acgacaccgg catctatggc tgggattacc
     5221 tctatgaact cggcgctggc cattccgagc gatgggccaa ctacctcgcc gaactcgacg
     5281 ccaaggggct ctcgcgcgag cccaccggcc ggcgcgcgtc atagaaaagg ccggcctcgc
     5341 ggccggcctt aaatcatctc caggatgatg ccgatcagcg cacgatc
//
LOCUS       DATAIQ010001097         2296 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_169049, whole genome shotgun sequence.
ACCESSION   DATAIQ010001097 DATAIQ010000000
VERSION     DATAIQ010001097.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2296)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2296)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2296
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_169049"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..696)
                     /locus_tag="VHN20_18150"
     CDS             complement(<1..696)
                     /locus_tag="VHN20_18150"
                     /inference="COORDINATES: protein motif:HMM:NF039279.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727750.1"
                     /translation="MAETPAPVELELARFRSLDGSPAIDLPVHFNPSSLQYTIQNQLK
                     EEGRGAKKKQHVSQTSAKLTMDLIFDTTDTGADVRTVTDMMTKLLQPVGSSKAPRTVE
                     FGWGTYRFTGLIEQYKETIDFFSPGGVPLRAGVNVTLASQDVTFASAHNPSASVDDAL
                     TPETVDVPAAPDGGGPPRSPANVANELGAPRAARAIAAANGAASLRFQPAGGLTIIAG
                     ASVGFSAGVGISAG"
     gene            complement(697..1215)
                     /locus_tag="VHN20_18155"
     CDS             complement(697..1215)
                     /locus_tag="VHN20_18155"
                     /inference="COORDINATES: protein motif:HMM:TIGR02241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HEX2727751.1"
                     /translation="MPAPLENIPENRLAPLHVFRFEVTFRRDAMKGTPTGAAVPLCSG
                     AFAECTGLEATMEPKVIKAGGLNYGPAQRVGQVSFATVILKRGMTTTRDLWNWFALVT
                     GGKYAVRLSAEIVMQDQAGTPALTWKLARALPIKFKAADLNARGTEVGVEELHLAHEG
                     LTLVDTIAQGSR"
     gene            complement(1215..>2296)
                     /locus_tag="VHN20_18160"
     CDS             complement(1215..>2296)
                     /locus_tag="VHN20_18160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727752.1"
                     /translation="VMPPIAHEPPAAPEGFVECSRDESAQQEDRALAHIAAPRCDSGG
                     YAAWRLAVTAMRAFIAQHRRDCLFIGALPLPAPDASRPSGDGRVYAETEFLAFLRRAG
                     VLEPDDWLTRPQSSAAPSRRVDGLELDGSNEPPPASAASAFVQLAWPWLVTRHSADLP
                     ELLEPGDGLLVGMIATAALLRGTFRSVAGTRLTEVLAASPATAWGLGPDSAAAQLAAR
                     LCLIAPEPEGWTLVSDVTTSTHPSWQQAGVRRLTASVLRAARTVGEGVLFEPNGPPLW
                     TRLRLGLEDLMTGFWREGGLRGQSTEDAFTVQCDGATMSQNDIDGGRLVAHIGFLPAT
                     AVERVTIVLALDPGGAVASGPREVA"
BASE COUNT          330 a          778 c          841 g          347 t
ORIGIN      
        1 gccggcggag atgccgacgc cagcgctgaa gccgacggat gcgccggcga tgatggtgag
       61 cccaccggcg ggctggaagc gcaagctcgc ggcgccgttg gctgccgcga tggcgcgcgc
      121 ggcgcgcggc gcgccgagct cgttcgccac attggccgga ctgcgcggcg ggccgccgcc
      181 atccggcgcc gcgggcacgt cgacggtttc cggcgtcagc gcgtcatcca cactggccga
      241 cgggttatgc gcgctcgcaa aggtgacatc ctggctcgcg agcgtgacgt tgacgccggc
      301 ccgcagcggc acgccgcccg gcgagaagaa atcgatcgtc tccttgtatt gctcgatcag
      361 cccggtaaag cggtacgtgc cccagccgaa ctcgaccgtg cgcggcgcct tcgacgagcc
      421 gaccggctgc aggagcttgg tcatcatgtc ggtcacggtg cgcacgtcgg cgccggtgtc
      481 cgtcgtgtcg aagatcagat ccatcgtcag cttcgcgctc gtctggctga cgtgctgttt
      541 cttcttcgcg ccccgaccct cttccttcag ctgattctgg atcgtgtatt gcagcgagga
      601 ggggttgaaa tgcaccggca ggtcgatggc cggcgagccg tccagactcc tgaaacgggc
      661 cagctccagc tcgaccgggg cgggggtctc ggccatctag cggctccctt gcgcgatggt
      721 gtccacgagg gtcagccctt cgtgggcgag atgcagttcc tcgacgccca cctcggtgcc
      781 gcgtgcgttc agatcggctg ccttgaactt gatcgggagg gcgcgtgcga gcttccacgt
      841 gagcgcgggg gtgccggcct ggtcctgcat gacgatctcg gcggacaggc ggacggcgta
      901 tttgcctccc gtcacgagcg cgaaccagtt ccagagatcg cgcgtcgtgg tcatgccgcg
      961 cttcaggatg acggtcgcga atgatacctg cccgacccgc tgcgccggcc catagttgag
     1021 gccgcccgcc ttgatcacct tcggctccat cgtggcttcg aggccggtgc attcggcgaa
     1081 ggcgccgctg cacaaaggca cggcggctcc ggtcggcgtt cctttcatcg cgtcgcgtcg
     1141 gaacgtcacc tcgaagcgga acacgtgcag cggcgcgagg cggttctccg ggatgttctc
     1201 gaggggggcg ggcatcacgc gacctcacgc gggccggaag ccaccgcgcc gccgggatcg
     1261 agcgcgagca cgatcgtgac gcgctcgact gcggtcgccg gaaggaatcc gatatgcgcg
     1321 acgaggcggc cgccatcgat gtcgttctgg ctcatggtgg cgccgtcgca ctgaacggtg
     1381 aacgcatcct cggtcgattg gccacgcagg cccccctcgc gccagaatcc ggtcatcaga
     1441 tcttcgaggc cgaggcgcag gcgggtccag agcggagggc cgttgggctc gaacagcacg
     1501 ccctcgccaa ccgtgcgcgc cgcgcgcagc acgctcgccg tgagccggcg cacgcccgcc
     1561 tgctgccacg aaggatgcgt cgaggtggtg acgtcggaga cgagcgtcca gccttccggc
     1621 tccggtgcga tcaggcaaag gcgcgcggcg agctgcgcgg ccgcgctgtc gggcccgagc
     1681 ccccaggccg tggcagggct tgccgcgagc acctcggtca ggcgcgtgcc ggcgaccgaa
     1741 cggaaggtgc cgcgcaacag ggctgcggtc gcgatcatgc cgacgaggag gccgtcgccc
     1801 ggctcgagca gctccggcag gtccgcggaa tggcgcgtga cgagccatgg ccaggcgagc
     1861 tgcacgaagg cgcttgccgc ggaggccggc ggcggttcgt tcgagccgtc gagctcgagg
     1921 ccgtcgacac ggcgcgacgg tgcagccgat gactgcgggc gggtcagcca gtcatctggc
     1981 tcgagcacgc ccgcgcggcg caggaaggcc aggaactcgg tttccgcata gacccgtccg
     2041 tcgccgctcg ggcggcttgc atcaggcgcc ggcagcggca gggcgccgat gaacaggcag
     2101 tcgcgccggt gctgggcgat gaaggcgcgc atggcggtaa cggcgagccg ccaggccgcg
     2161 tagccgccac tgtcgcagcg cggcgcggcg atatgggcga gcgcgcggtc ctcctgctgc
     2221 gcggactcgt cacggctgca ctcgacgaag ccttccggcg ccgccggggg ctcgtgtgcg
     2281 atcggtggca tgaccg
//
LOCUS       DATAIQ010001098         5549 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_227235, whole genome shotgun sequence.
ACCESSION   DATAIQ010001098 DATAIQ010000000
VERSION     DATAIQ010001098.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 5549)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5549)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5549
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_227235"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1163
                     /locus_tag="VHN20_18165"
     CDS             <1..1163
                     /locus_tag="VHN20_18165"
                     /inference="COORDINATES: protein motif:HMM:NF037144.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HEX2727753.1"
                     /translation="EANAVVEDASIAIVAAQGVLAGDTDVDGDDLAVTAIGQGVRAGV
                     VGMAFAGTLGTLTLNADGSYSYAADLDAADALAPGQTADDVFTYTVSDGNGGSDTATL
                     TITVTGIIETFGSGGPDEFVGDDNPNPYDGGTGADRIFGRGGNDRLLGGADNDVVSGE
                     GGDDHIEGGDGDDELHGGTDNDQLFGDAGNDQLSGGLGNDLLSGGADNDQLFGLEGND
                     LLLGGAGNDLADGDGGNDRIFGHDGDDMLIGRDGNDQLEGGDGNDLLSAGAGNDMVAG
                     GNGVDTLYGGTGRDTFEFRALSEGGDRIEDFSFAQGDRIRLTAIDADATAGGNQAFAF
                     IGNAAFSDAGQLSFVTRGSETHLLLNTDNDAAAEAVIRLRGHHTPTADWFML"
     gene            complement(1210..2049)
                     /locus_tag="VHN20_18170"
     CDS             complement(1210..2049)
                     /locus_tag="VHN20_18170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019200128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEX2727754.1"
                     /translation="MRQHPFGPTKRPVAAIGQGTWRVDEADHARAILALRAGIDRGMT
                     HIDTAEMYGDAELIVGEAIEGRRDEVFLVSKVLPHNASREGTIAACERSLKRLKTDRL
                     DCYLLHWRGSIPLQDTFAAFARLRDAGKILSWGVSNFDAPDLDEALAVAGPGQIACDQ
                     VLYHLQERAIEHAVLPWCEQHAVAVVGYSPFGHGDFPAGSSPGGRVLAQIAKAHGATA
                     RQVALAFLTRRPSLLTIPKASDAKHTQDNAGAGDVQLTSAEIEQIDAAFPRGRRPRSL
                     PML"
     gene            complement(2108..2830)
                     /locus_tag="VHN20_18175"
     CDS             complement(2108..2830)
                     /locus_tag="VHN20_18175"
                     /inference="COORDINATES: protein motif:HMM:NF020893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VTT domain-containing protein"
                     /protein_id="HEX2727755.1"
                     /translation="MTPSPDSVPATGGDSRSARRIVALCCFGAVAVVVIPYLALGASF
                     EDAATEMFQTQTSRAAAAAIGVLLLAADMVLPIPSSIVATGLGVALGWWAGMLAATAG
                     LSIGCILGFALGRSGGERFMLARAAVRERRLSELLARHGVTVLVLCRGVPILAEASVM
                     AAGALGLPVWRCLAATTLANVAVAAVYAAIGTAAWDVSPIVAFLAALVVPGVLLAASS
                     ATWRLWTHGRLNAGHVADSSRN"
     gene            complement(2827..3300)
                     /locus_tag="VHN20_18180"
     CDS             complement(2827..3300)
                     /locus_tag="VHN20_18180"
                     /inference="COORDINATES: protein motif:HMM:NF013736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HEX2727756.1"
                     /translation="MSHASASHSTSPDLDEQLAQIVQSFRADSGTVHILQADGLLHLA
                     AATPGIPEPVLATIARIPVGKGMAGLAVERGCPVDACNIQTDTSGDVRPGAKATGLAG
                     AIVVPIFRGDATIGALGIGNRGERTFTAAEAQELIAAGRRLAVRAEFDDAGGAGS"
     gene            complement(3430..4917)
                     /locus_tag="VHN20_18185"
     CDS             complement(3430..4917)
                     /locus_tag="VHN20_18185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007562322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing methyl-accepting
                     chemotaxis protein"
                     /protein_id="HEX2727757.1"
                     /translation="MFGLSRASSTAAEAEAKLAALDKSQAVIEFKVDGTILTANKNFL
                     DATGYALPEIQGRHHSMFVTPEFKESAEYRQFWENLARGEYQAAQYKRLGKGGKEIWI
                     EASYNPVIGRNGKPYKIVKFATDVTRQKTEYADLLGKINAIGTSQAVIEFSLDGTILT
                     ANDNFLQAVGYELSEIQGRHHSMFVEPAYKVSCDYAEFWDKLRRGEFQAAQYKRLGKG
                     GREIWIGASYNPILDLNGTPYKVVKFATDITRQAQLLANLNRLIEENFAEIETAVAQS
                     NRQSRDAAGSAVEASGNVQAMAAASEELVVSVAEISEAMAKSKAATDSAFTQAGAADG
                     ATQRLSNAASAMGGIVGLIQNIAGQINLLALNATIEAARAGEAGRGFAVVATEVKNLA
                     AQAARATEQISTEIDSVQAISQDVVGALENIRGAVTMLRDQVVATSSAVQQQSAVTRD
                     MSQGMQNAAHAAERISHSITEISAAVTQVSNAVGKTKEAAKVLAR"
     gene            5100..>5549
                     /locus_tag="VHN20_18190"
     CDS             5100..>5549
                     /locus_tag="VHN20_18190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012319847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase"
                     /protein_id="HEX2727758.1"
                     /translation="MTLLTTTVTARQTLPAGGAGALAGRVWRPDVDGPSVVAVRDGQV
                     VDVSRSFPTMRDLCEAPDPGRALREAGGDPLGALDGILANSWPDGRERTKPWLLAPID
                     LQAVKAAGVTFAVSTLERVIEERARGNPDQAAAIRVEVNRLVGDDLRS"
BASE COUNT          857 a         1886 c         1943 g          863 t
ORIGIN      
        1 acgaggccaa tgcggtcgtc gaggacgcgt cgatcgccat cgtggccgcg caaggcgtgc
       61 tcgccggcga caccgacgtg gacggcgatg atctcgccgt cacggcgatc gggcagggcg
      121 tgcgcgcggg cgtggtcggg atggcgttcg ccggcacgct cggcacgctg accctcaacg
      181 ccgacggcag ctacagctac gcggccgatc tcgacgccgc cgacgcgctg gcgcccggcc
      241 agacggccga cgacgtcttc acctacaccg tgtcggacgg caacggcggc agcgacaccg
      301 ccacgctgac catcacggtc accggcatca tcgagacctt cggttctggc gggcctgacg
      361 agtttgtggg cgacgacaac ccgaaccctt atgacggcgg caccggcgct gaccggatct
      421 tcggccgcgg cggcaacgac aggctgctcg gcggcgccga caacgacgtc gtctccggcg
      481 aaggcggcga cgatcatatc gagggcggcg acggggacga cgagctgcat ggcggcaccg
      541 acaacgacca gctgttcggc gatgccggca acgaccagct cagcggcggc ctcggcaacg
      601 acctcctgtc cggcggcgcc gacaacgacc agctgttcgg gctggaaggc aacgacctcc
      661 tgctcggcgg ggccggcaac gatctcgccg acggcgacgg cggcaacgac cggatcttcg
      721 gccacgacgg cgacgacatg ctgatcgggc gcgacggcaa cgaccagctc gagggcggcg
      781 acggcaacga cctgctgtcg gccggggcgg gcaacgacat ggtcgccggc ggcaacggcg
      841 tcgacacgct gtatggcggc acgggtcgcg acaccttcga gttccgcgcc ctcagcgaag
      901 gcggcgaccg catcgaggac ttcagcttcg cccagggcga ccggatcagg ttgacggcca
      961 tcgacgccga cgcgaccgcc ggcggcaacc aggcgttcgc gttcatcggc aatgccgcct
     1021 tcagcgatgc cggccagctc agcttcgtca cgcgcggcag cgagacccat ctgctgctca
     1081 acaccgacaa cgatgcagct gccgaggcgg tcatccgcct gcgtggccat cacacgccca
     1141 cggccgactg gttcatgctg taggcccgcc gaaggggggc gctgctgcgg acgcagcgct
     1201 tcgccgccgt cacagcatcg gcaggctgcg cggacgccgg ccgcgcggaa atgcggcgtc
     1261 gatctgctcg atctcggccg acgtcaactg cacgtcgccg gcgccggcat tgtcctgcgt
     1321 atgctttgcg tccgacgcct tggggatcgt gagcaggctc gggcggcggg tcaggaaggc
     1381 gagggcgacc tggcgcgcgg tcgcgccgtg cgccttggcg atctgggcca gaacccggcc
     1441 gccgggactt gaccctgccg gaaagtcgcc gtgcccgaac ggcgaatagc ccaccacggc
     1501 gacggcgtgc tgctcgcacc agggcaggac cgcgtgctcg attgcccgtt cctggaggtg
     1561 gtagaggacc tggtcgcagg cgatctggcc ggggcccgcc acggcaaggg cctcgtcgag
     1621 gtcgggcgca tcgaagttgc tgacgcccca cgacaggatc ttgccggcgt cgcgcagccg
     1681 cgcgaatgcg gcgaaagtgt cctgcagcgg gatcgaaccg cgccagtgca ggagatagca
     1741 atcgagccgg tcggtcttga ggcgcttcaa cgagcgctcg cacgcggcga tcgtgccctc
     1801 gcgcgaggcg ttgtgcggaa gaacttttga gacgaggaac acctcgtcgc gtcggccctc
     1861 aatcgcttcg cccacgatga gctccgcatc cccgtacatc tcggcggtgt cgatatgcgt
     1921 catgccgcgg tctatccctg cccgcagggc gaggatggcc cgggcatggt ccgcctcgtc
     1981 gacgcgccac gtgccctggc cgatcgctgc gacagggcgt ttcgttggtc cgaacggatg
     2041 ctgccgcatg gcgctctcca ggtgatcttc aaatgatgat cggcaggcga acgcgagacg
     2101 gggcctccta gtttcgagag ctgtcggcca catgtcccgc attgaggcgg ccgtgcgtcc
     2161 acaaccgcca cgtcgccgag ctcgcggcga gcaggacgcc aggcacgacg agcgccgcca
     2221 ggaacgccac gatgggcgac acgtcccacg ccgccgtgcc gatggctgca taaaccgccg
     2281 cgaccgcgac gttggcgaga gtcgtcgccg cgaggcatcg ccagaccggc aatccgagcg
     2341 cgccggccgc catcacggac gcttcggcga ggatcggcac gccgcgacaa aggacgagga
     2401 cggtgacgcc gtgacgcgcc aacagctcgg acagccggcg ctcgcgcacg gccgcgcggg
     2461 cgagcatgaa ccgctccccg ccggagcggc cgagagcgaa gccgagaatg cagccgatgc
     2521 tgagaccggc cgtcgccgcg agcatgcccg cccaccaccc caacgcgacg ccgaggccgg
     2581 tcgcgacgat gctcgacggg atcggcagga ccatgtcggc ggcaaggaga agcacgccga
     2641 tggcggccgc cgcggcgcgg ctcgtctggg tttggaacat ctcggttgcg gcgtcctcga
     2701 aggatgcgcc gagggcgaga taggggatca cgacgacagc gacggccccg aagcaacaca
     2761 gagcgacgat gcgccgcgca gatcggctgt cgccgccggt cgcaggcacg ctgtcgggcg
     2821 aaggcgtcac gagcccgcgc cgccggcgtc gtcgaactcg gcgcggacgg cgaggcgacg
     2881 cccggcggca atcagctcct gcgcttccgc tgccgtgaat gtgcgctcgc cgcggttgcc
     2941 gatgccgagc gcgccgatgg tggcgtcgcc gcgaaagatc ggcaccacga tcgcgcccgc
     3001 gagacccgtg gccttcgcgc cgggcctaac gtcgccgctc gtgtcggtct ggatgttgca
     3061 ggcatcgacg gggcaccccc gctccacggc aaggcccgcc attcccttgc cgacggggat
     3121 ccgcgcgatc gtcgccagca ccggctccgg gatgcctggc gtcgctgcgg cgagatgcag
     3181 gaggccgtcg gcctgcagga tgtgcacggt tccgctgtcg gcgcggaacg attgcacgat
     3241 ctgcgccagt tgctcgtcga gatcaggcga cgtggagtga gaagcgctgg cgtgactcat
     3301 ggctccctcc cgggcggcag ccgggacatg gtgccatgcg cgccggcttt ggcaagtcgg
     3361 cgtgcccgag ccggcgcgga cggttcgcaa cgggggcgcc gcctgcctct cctgcgccgc
     3421 gtctcgccct cagcgcgcca ggaccttggc ggcctccttg gtcttgccga cagcgttgga
     3481 aacctgggtc acggccgccg agatctcggt gatgctgtgc gaaatgcgct cggcggcgtg
     3541 ggccgcgttc tgcatgccct gcgacatgtc gcgggtgacg gcgctctgct gctgtaccgc
     3601 ggacgaggtc gcgacgacct ggtcgcgcag catggtgacc gctccgcgga tgttctcgag
     3661 cgcgccgacg acatcctggg agatcgcctg gacgctgtcg atctccgtgg agatctgctc
     3721 ggtcgcccgc gccgcctggg cggcgaggtt cttgacctcg gtggccacga cggcgaagcc
     3781 gcgtccggct tcgccggcgc gcgccgcttc gatcgtcgcg ttcagcgcca gcaggttgat
     3841 ctgcccggcg atgttctgga tcaggccgac gatgccgccc atcgcgcttg ccgcgttgga
     3901 caggcgctgc gtcgccccgt cggcggcgcc ggcctgggtg aaggcgctgt cggttgcggc
     3961 cttggacttc gccatcgctt cggagatctc ggcaaccgac acaaccagct cttcggaagc
     4021 ggccgccatc gcctgaacgt tgcccgaagc ttcgacggcg gagcccgccg catcgcgcga
     4081 ctgccggttg gattgcgcaa cggccgtctc gatctctgcg aaattttctt cgatcaggcg
     4141 gttgaggttc gccaggagct gcgcctgcct cgtgatgtcg gtggcgaatt tcacgacctt
     4201 gtacggggtg ccgttcaggt cgaggatcgg attgtaggac gccccgatcc agatctcgcg
     4261 gccacccttg ccgagacgct tgtactgcgc ggcctggaac tcgccgcgcc ggagcttgtc
     4321 ccagaactcc gcataatcgc agcttacctt gtaggccggt tcgacgaaca tgctgtgatg
     4381 ccggccctgg atttcgctca actcgtagcc caccgcctga aggaaattgt cgttcgcggt
     4441 caggatcgtc ccgtcgaggc tgaactcgat caccgcctgc gacgtgccga tggcgttgat
     4501 cttgccgagg aggtcggcgt attcggtttt ctggcgcgtg acgtcggtcg cgaatttcac
     4561 gatcttgtag ggcttgccgt tgcgcccgat caccggattg taggacgctt cgatccagat
     4621 ctccttgccg cctttgccga gccgcttgta ttgcgccgcc tggtattctc cgcgggcgag
     4681 gttctcccag aactgcctgt attcggcgct ctccttgaat tccggcgtca cgaacatgct
     4741 gtgatgccgg ccctggatct cggggagcgc atagcccgtc gcgtccagaa aattcttgtt
     4801 ggccgtcagg atagtgccgt cgaccttgaa ctcgatcacc gcctgcgact tgtccagggc
     4861 ggcgagcttc gcttcggctt cagcggcggt gctcgacgca cgagagagac cgaacattcg
     4921 gcgcaaaacc ttccaatatg aagagatcac aaaacaacgt ggcaattcgc acgcgcaact
     4981 aaggccacga gtcgcttaaa aggcgtttaa ccgggggttg tccctcgccc tacaatgggc
     5041 gtgttcgtgt tgactcgcgt cggcggcggt ttgacgatgc gccgggggag ggccacggga
     5101 tgacgctgct cacgacgacg gtaacggccc ggcagacgct gccggcgggc ggggcagggg
     5161 ccctggccgg ccgcgtctgg cgaccggatg tcgacggccc gtcggtcgtc gcggtgcggg
     5221 acgggcaggt cgtcgacgtg tcgcggtcgt tcccgaccat gcgcgacttg tgcgaggcgc
     5281 ccgacccggg gcgcgcgttg cgcgaggccg gcggcgatcc gctgggggcg ctcgacggaa
     5341 tcctcgccaa tagctggccc gacgggcgcg agcgcacgaa gccgtggctg ctcgcgccca
     5401 tcgacctcca ggccgtgaag gccgcgggcg tcactttcgc ggtgtccacg ctcgagcgcg
     5461 tcatcgagga gcgggcgcgc ggcaatcccg atcaggccgc cgccatccgg gtcgaggtga
     5521 accgccttgt cggcgacgac ctcagatcg
//
LOCUS       DATAIQ010001099         1829 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_271400, whole genome shotgun sequence.
ACCESSION   DATAIQ010001099 DATAIQ010000000
VERSION     DATAIQ010001099.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1829)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1829)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1829
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_271400"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..660
                     /locus_tag="VHN20_18195"
     CDS             <1..660
                     /locus_tag="VHN20_18195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012331851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX2727759.1"
                     /translation="GAFVVRLSGIYLAMMTLAAAQILYAVAFQWVDVTGGDNGIVGVW
                     PATWASSRLAYYYLTLAVSIVTIAGLRHVIYAPFGYALRGARDSELRADAIGIDVRMH
                     RWLSFTLAGAIAGLAGGLYVFSKGSIDPSALGIPTSVDALTMLLLGGIQTVMGPVVGA
                     AVLHVLRDQIMPLTEMWRLILGLSIIAMVLLFPQGLVAAADGLRRRGTRAAMKTVEAS
                     A"
     gene            657..1439
                     /locus_tag="VHN20_18200"
     CDS             657..1439
                     /locus_tag="VHN20_18200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018261763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2727760.1"
                     /translation="MTLLVARQLCKAFGGVVAARDVSFAVAPGELLALIGPNGAGKTT
                     TFNLIDGQLQPDRGTVILDGEDVTRAPPRTKFRRGVGRTFQVAQTFLSMTAAENVQMT
                     LISRRRRYRSLLANAHRLYHDEAVATLAEVGMADQADRACSTLAYGDIKRVELAIALA
                     SEPKLLLMDEPTAGMAPKERAALMRLAARIARERRMGVLFTEHDMDAVFAHADRVLVL
                     VRGEIIAAGSPDEVRGDARVRQAYLGTAGAAAAERARRSRDG"
     gene            1429..>1829
                     /locus_tag="VHN20_18205"
     CDS             1429..>1829
                     /locus_tag="VHN20_18205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013165123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX2727761.1"
                     /translation="MTAEPALLHVRGLSAFYARAQVLFGVSLDVKAGEVVALLGRNGA
                     GKSTTLKAIMGLTARNAERLVFAGRGIAGCASYRIARLGLGYVPEDRRVFTDLTVEEN
                     LAVGRQAPRGGRAAWTHERLFAIFPNLAEMR"
BASE COUNT          250 a          655 c          626 g          298 t
ORIGIN      
        1 ggcgccttcg tggtgcgcct gtccggcatc tatctcgcca tgatgacgct cgccgccgcc
       61 cagatcctct atgcggtcgc gttccagtgg gtggacgtga ccggcggcga caacggcatc
      121 gtcggcgttt ggcccgccac atgggcatca agccgcctcg cctactatta tctgacgctc
      181 gccgtctcga tcgtgacgat cgcaggcttg cggcacgtca tctacgcgcc gttcggctat
      241 gccttgcgcg gcgcccggga ctccgagctg cgcgcagacg cgatcggcat cgacgtccgc
      301 atgcatagat ggctgtcgtt cacgctggcc ggcgcgatcg ccggcctcgc cggcgggctt
      361 tacgtctttt ccaagggctc gatcgatccg agcgcgctcg gcatcccgac ctcggtcgat
      421 gccctgacca tgcttctgct cggcggcatc cagacggtga tgggaccggt cgtcggcgcg
      481 gccgtgctgc acgtcctgcg tgaccagatc atgccgctca ccgagatgtg gcggctgatc
      541 ctcgggctca gcatcatcgc catggtcctg ctgttcccgc aagggctggt cgcggccgcc
      601 gacgggctac gcagacgcgg cacgcgggct gcgatgaaga ccgtggaggc atccgcgtga
      661 ccctgctcgt ggcgcgtcag ctctgcaagg cgttcggcgg cgtcgtggct gccagggatg
      721 tttcgttcgc ggtcgcgccg ggcgagcttc tggcgctcat cggcccgaac ggcgccggca
      781 agaccacgac gttcaacctg atcgacggac agttgcagcc cgaccgcggc acggtgatcc
      841 tcgacggcga agacgtcaca cgggcgccgc cgcgcaccaa gttccggcgc ggcgtcgggc
      901 gcaccttcca ggtcgcccaa acattcctgt ccatgacggc tgccgagaac gtgcagatga
      961 cgttgatcag ccgccgccgg cgctaccggt ccctgcttgc gaacgcgcac cgcctgtacc
     1021 acgacgaggc cgtcgcgacc ctggccgagg tggggatggc ggatcaggcg gaccgcgcct
     1081 gctcgaccct cgcctacggc gatatcaagc gcgtcgagct cgccatcgcc ctggcgagcg
     1141 agccgaagct gctcctgatg gacgagccga ccgccggcat ggcgcccaag gagcgcgccg
     1201 ccctgatgcg gctcgccgcg cgcatcgccc gcgagcgccg catgggcgtg ctgttcaccg
     1261 agcacgacat ggacgcggtg ttcgcccatg ccgatcgcgt cctcgtgctc gtccgtggcg
     1321 agatcatcgc cgcaggatcc cccgacgagg tgcgcggcga cgcgcgcgtg cggcaagcct
     1381 atctcggcac cgccggggcg gcggcggcgg agcgggcgcg gaggagccgt gacggctgag
     1441 ccggcccttc tccatgtgcg cgggctgtcg gccttctacg cccgcgcgca ggtcctgttc
     1501 ggcgtttcgc tcgacgtgaa agcgggggag gtcgtcgccc tcctcggccg caatggcgcc
     1561 ggcaagtcga ccacgctcaa ggccatcatg gggctgacgg cgcgcaatgc cgagcgactc
     1621 gtcttcgccg gccgcggaat tgccggttgc gcgagctatc gcatcgcgcg cctcggcctc
     1681 ggatacgtgc cggaagaccg ccgcgtcttc accgatctca cggtcgagga gaatctcgcc
     1741 gttggccggc aggcgccccg cggcgggcgc gccgcctgga cgcacgagcg cctgttcgcg
     1801 atcttcccca acctcgccga gatgcgcga
//
LOCUS       DATAIQ010001100         1923 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_227353, whole genome shotgun sequence.
ACCESSION   DATAIQ010001100 DATAIQ010000000
VERSION     DATAIQ010001100.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1923)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1923)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1923
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_227353"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..726)
                     /locus_tag="VHN20_18210"
     CDS             complement(<1..726)
                     /locus_tag="VHN20_18210"
                     /inference="COORDINATES: protein motif:HMM:NF012787.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016209 - antioxidant activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin domain-containing protein"
                     /protein_id="HEX2727762.1"
                     /translation="MNTVAGTQPAFANLTPGDPAPWFRQRSGSNPRYVFDTAAGRYIV
                     LCFYGSAGDARGRTTIREVMARRAFFDDVRACFFGVSLDPQDEAENRVADSTPGVRFF
                     WDFDATVSSLYGAVPKTTEPGKPVRGRRFWVVVDPMLRVLKVLPFADNGRDVADLFAF
                     LESLPPPERFAGFEIQAPILILPNVFEPDFCRQLIDLYEKHGGEESGFVRQIGDKTLM
                     IADPDFKRRKDFTITDPALIKSLQ"
     gene            904..1668
                     /locus_tag="VHN20_18215"
     CDS             904..1668
                     /locus_tag="VHN20_18215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012605528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX2727763.1"
                     /translation="MQFFDSDGVRIAYIDVAPGQGPGDPVLLVHGFASTHAVNWVNTL
                     WVKTLTGAGYRVIAFDNRGHGQSGKLYDAAAYHSSVMAEDARRLLDHLGLERADVMGY
                     SMGARITAHLALQHPGRVRSALIGGIGIKLVEGIGLPTSIADALEAPSLEAVSDPMGR
                     MFRAFAEQTRSDLKALAACIRGSRQVLSREQVAQIDAPALIAVGTRDEVAGPPQPLAD
                     LMPNARALDIPGRDHNLAVGDKTHKEGVLAFLSQRP"
     gene            1757..>1923
                     /locus_tag="VHN20_18220"
     CDS             1757..>1923
                     /locus_tag="VHN20_18220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018044046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HEX2727764.1"
                     /translation="MSQTRPRAEGPEPIAGVVDPIWTRLRQEAEAIIRQEPALTSFIV
                     TTILNHPTLEAA"
BASE COUNT          309 a          670 c          664 g          280 t
ORIGIN      
        1 ctgcagcgac ttgatcaggg ccggatccgt gatcgtgaag tccttgcgcc gcttgaagtc
       61 ggggtcggcg atcatcaggg tcttgtcgcc gatctggcgc acgaagcccg attcctcgcc
      121 gccgtgcttc tcgtaaaggt cgatcagctg ccggcagaag tcgggctcga acacgttggg
      181 caggatcagg atgggggcct ggatctcgaa gccggcgaag cgctccggcg gcggcaggct
      241 ctcgaggaag gcgaacaggt cggcgacgtc gcggccgttg tcggcgaagg gcaggacctt
      301 gagcacgcgc agcatcgggt cgaccaccac ccagaagcgg cggccgcgca ccggcttgcc
      361 gggctccgtc gtcttcggca cggcgccgta gaggctgctg acggtcgcgt cgaaatccca
      421 gaagaagcgc acgcccggcg tcgagtcggc gacgcggttc tcggcctcgt cctgcgggtc
      481 gaggctgacg ccgaagaagc aggcgcgcac gtcgtcgaag aaggcgcgcc gcgccatcac
      541 ctccctgatg gtggtgcggc cgcgcgcgtc gccggcggag ccgtagaagc agagcacgat
      601 gtagcgcccg gccgccgtgt cgaagacgta gcgcgggttg ctgccggagc gctggcggaa
      661 ccacggcgcc ggatcgccgg gcgtcaggtt ggcgaaagct ggctgggtgc cggcaacggt
      721 gttcatcggt gcccccgagg cgtgcgacaa gcggaaacga tcatacccgg gaacgcccgt
      781 tcgatcatcc cccggaacca ttgccccgac cccggggggc cgctagaggg gaacgcctcg
      841 agaccgcaac gatcccggcc ggccttcgag gcgaggttgc cgccgctttc cggacccctt
      901 ctcatgcagt tcttcgattc cgacggcgtc cgcatcgcct atatcgacgt cgcgccgggc
      961 caaggcccgg gcgacccggt gctcctggtg cacggcttcg cgtcgaccca cgcggtcaac
     1021 tgggtcaaca cgctgtgggt caaaacgctg accggcgcgg gctaccgcgt gatcgccttc
     1081 gacaaccgcg ggcatggcca gagcggcaag ctctacgatg ccgccgccta ccattcctcg
     1141 gtcatggccg aggacgcgcg ccgcctgctc gatcacctgg ggctcgagcg cgccgacgtg
     1201 atgggctact cgatgggcgc ccgcatcacc gcgcatctgg cgcttcagca tccgggccgg
     1261 gtgcgctcgg ccctgatcgg cggcatcggc atcaagctgg tcgaaggcat cggcctgccg
     1321 accagcatcg ccgatgcgct cgaggcgccc tcgctcgagg cggtcagcga cccgatgggg
     1381 cgcatgtttc gcgccttcgc ggagcagacc aggagcgacc tcaaggcgct cgccgcctgc
     1441 atccgcggct cgcggcaggt tttgtcgcgc gagcaggtgg cgcagatcga cgcaccggcc
     1501 ctgatcgcgg tcggcacccg cgacgaagtg gccggcccgc cgcagccgct ggccgacctg
     1561 atgccgaacg cgcgcgccct cgacatcccg gggcgcgatc acaatctcgc ggtcggcgac
     1621 aagacgcaca aggaaggcgt gctcgccttc ctgtcgcagc ggccttaaac agccgcgttc
     1681 atcatggctg gtggacagcg cccgccggct ccccacttag tgtagacttg aggcgatccg
     1741 cgaaggagtg acgatcatgt cccagacccg ccccagggcc gaaggcccgg agccgatcgc
     1801 cggcgtcgtc gacccgatct ggacgcgcct caggcaggaa gccgaggcga tcatccgcca
     1861 ggagcccgcg ctcaccagct tcatcgtcac gacgatcctc aaccatccga cgctcgaggc
     1921 ggc
//
LOCUS       DATAIQ010001101         3270 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_271446, whole genome shotgun sequence.
ACCESSION   DATAIQ010001101 DATAIQ010000000
VERSION     DATAIQ010001101.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3270)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3270)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3270
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_271446"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..270
                     /locus_tag="VHN20_18225"
     CDS             <1..270
                     /locus_tag="VHN20_18225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015950475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727765.1"
                     /translation="IGNTIVRLFGVEWARGAQTDDLKRYLADRDVTCTPATRPDRHRC
                     QVDGRDLSEVVLYNGGGRATADATPELKAAEDHARAAGWGVWQKP"
     gene            complement(407..898)
                     /locus_tag="VHN20_18230"
     CDS             complement(407..898)
                     /locus_tag="VHN20_18230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008839595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HEX2727766.1"
                     /translation="MAKEKTLDDLFLEVLKDTYHAEKQILRALPRMAKAAESEQLRSA
                     FKTHRDETEGQIERLEQVFEMIGKPARAKACPAIQGIIEEGKEVMSDFAETDALDAGL
                     IAAAQAVEHYEIARYGTLRTWAGQLGIKGAVRLLDQTLREEKKTDELLTKLAEASANE
                     KAA"
     gene            complement(1211..1426)
                     /locus_tag="VHN20_18235"
     CDS             complement(1211..1426)
                     /locus_tag="VHN20_18235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727767.1"
                     /translation="MFLNPAKPGGTAPRDVEFTAKDLDDTIALHRRISRQETRLARAF
                     DEMNEYAPGSDYGRLPAGVQGPHSPTD"
     gene            2239..2448
                     /locus_tag="VHN20_18240"
     CDS             2239..2448
                     /locus_tag="VHN20_18240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009762606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HEX2727768.1"
                     /translation="MTNGTVKFYNDMKGFGFIQPEDGSKDVFVHATALERAGIRGLAE
                     GQKVSFDTAEDRRSGKVAVNNIQTA"
     gene            2582..2791
                     /locus_tag="VHN20_18245"
     CDS             2582..2791
                     /locus_tag="VHN20_18245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009762607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727769.1"
                     /translation="MTHKYHVRQLVRLLRPGFSDSRASTAGFYEVTRLMPADQTGEFS
                     YRIKSSAGGERAVREGEITARVSDN"
     gene            2788..3081
                     /locus_tag="VHN20_18250"
     CDS             2788..3081
                     /locus_tag="VHN20_18250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727770.1"
                     /translation="MTNAHTLLPDSRLYEPVALLRGDEETLIVARIGMKTSKRLTILT
                     PDGQPAWPHEPFGSLSDVAWSLRAHERHLLTPEPVGANPGAARTLARLLKERE"
BASE COUNT          559 a         1043 c         1037 g          631 t
ORIGIN      
        1 atcggcaaca ccattgtccg cctgttcggc gtcgagtggg cgcgcggcgc gcaaacggat
       61 gacctgaagc gctatctcgc ggaccgcgac gtgacatgca cgccggcaac gcggcccgac
      121 cgccatcgtt gccaggtcga cgggcgcgac ctgtcggaag tcgtcctcta caacggcggc
      181 ggccgggcga cggccgacgc gaccccggag ctcaaggccg ccgaagatca tgcccgcgcg
      241 gcgggttggg gtgtctggca gaagccgtga ggcggcatga tccagctgac tcgatccggg
      301 atcatgcgac acgaagaaaa agggattcgg atcgattcaa tctgaatcga tccagctctg
      361 gcggcggcct ggcgacgccc cgctcacgtg tttctccgag tgcccgtcag gccgcttttt
      421 cgttggccga agcttcggcg agcttggtga gcaactcgtc ggttttcttc tcttcccgaa
      481 gcgtctggtc gagcagccgc accgccccct tgatgccgag ttgcccggcc caggtccgca
      541 gcgtgccgta gcgggcgatc tcgtaatgct cgaccgcctg cgcggcggcg atcagtccgg
      601 catcgagcgc atccgtttcg gcaaagtcgg acatcacctc cttgccttcc tcgatgatgc
      661 cctgaatggc cgggcaggct ttcgcgcgcg ccggcttgcc gatcatctcg aacacctgtt
      721 cgaggcgctc gatctggccc tcggtttcgt cgcgatgggt cttgaacgcg ctgcgcagct
      781 gctcggattc ggcggctttc gccatcctcg gcagggcgcg caggatctgc ttctcggcgt
      841 ggtaggtatc cttcagcact tcgaggaaga ggtcgtcgag ggttttctct tttgccatgg
      901 cgctttcctc acgcttgtgc cgcccacttc aaccggacgc ggctcctctt tgttcctgag
      961 ccccgcgcga gacggatcct tggcggtttc ggctcgctcc gcgcagcgga cggcgcgtgt
     1021 acgacgacgt gaccgcgttg ccgccgccgc tcgcgtcacg cgccgttcgc gctgcgcatc
     1081 tcttggcgtc ggcatggctt tccttgacct tgcaccgaac ctcgcgacgt caggcaagcg
     1141 gcggaattca atcgccgcgc gtgcaaccct tgtcgctcgt ttccattttc ctgccgctcg
     1201 gagaacgccg tcaatccgtc gggctgtgcg ggccttgcac cccagccggc aatcgcccgt
     1261 agtccgatcc tggggcgtac tcattcatct cgtcgaacgc gcgggccagg cgggtttcct
     1321 gacgactgat tcgccgatgg agagcgatcg tgtcgtcgag gtctttggcc gtgaactcaa
     1381 cgtcccgggg ggctgtgccg cccggctttg ctggattgag gaacatggtg ctttcccttc
     1441 tgtatcaggc gggagcacgc gcatctctca gccgctgacg cctgtaatcg aaggccagcg
     1501 ataaattgta tgtggtcctt tgttgaagga attgcgaggt ggacaggtca gcgtgcctca
     1561 ccttccggca actttgttaa gaccttgagg cgcaggactg gtgctgcaca tggtgtgctt
     1621 cgcaacaagc tcggcttcgg agaacgggat gccaaccttt gcgcacgaac agcgccggcg
     1681 agcggagatc tgccgtgtgc aggctgaaaa ggcgccgacg gaaagtcacc gggcatactg
     1741 gcgcaaattg gcggacgatt gcgttgccct ggctcaagct cgagatgatg cggatgagcg
     1801 catgtcggac caaggctctc aggcggctcg ccctgcaccg ccggcttacc gagggtgaac
     1861 ggtgctttcg ttcgttatcc tgacgactgc ccggtgaaat cgccaactcg ccccgcacaa
     1921 gcggcttcaa ccagcgtccc gcctcgtttg cactcggccc gaccgtcggc aaaccttgcc
     1981 ggtttctgaa acttcaaggg tatttgggta cctcggtctg ttgttcatgg gctgattgtc
     2041 caaggtgccc ttgcaaatgc gctcgaaagc gcctacctga ggtcatcgac tttggccgga
     2101 caactgggcc gcttcgcctt cgctgatagc agggcgcgca ccgcttcaga atttctctcc
     2161 aaacatcgag aagccgagca gagccgcaca ttcgtgtgcg gcggctcacg tgcagctatg
     2221 tcagcaaagg acatgcaaat gacgaacgga actgtaaaat tctataacga catgaagggc
     2281 tttggattca ttcagcccga ggacggcagc aaggacgttt tcgttcatgc cactgcgctc
     2341 gagcgggccg gcatccgggg gctcgccgaa ggtcagaagg tctccttcga caccgcggaa
     2401 gaccgccgca gcggcaaagt tgccgtcaac aacatccaga ccgcctgagc tggatgaggg
     2461 ccggaactga tccgagccgt cgtgaagccg ctcccatgtg gggcggcttt tttgttgcgg
     2521 cgcccctcgt gccgctcacg cccacgccca tggcgccgcc tgcaagcgca aaggacatgc
     2581 aatgacccat aagtatcacg ttcgccagct ggtccgcctc ttgcggcccg gcttctctga
     2641 ctcgcgcgcg agcacggctg gcttctacga ggtcacgcgc ctgatgcccg ccgaccagac
     2701 gggtgagttc tcgtaccgca tcaagtcctc ggccggcggc gaacgcgccg tgcgggaagg
     2761 cgagatcacg gcgcgcgtgt ccgacaattg accaacgcgc acacattgct tcccgactct
     2821 cggctttatg agccggtggc gttgctacgc ggcgatgagg aaacgctgat tgtcgcccgg
     2881 atcggaatga aaacgtccaa gcggctgacg attctcacgc ccgatggcca gccggcgtgg
     2941 ccgcacgagc cgttcggcag cctgtcggac gtggcctggt ctcttcgtgc acatgagcgg
     3001 caccttttga cgccggagcc ggtcggagcg aatcccggcg ccgccaggac gctcgccagg
     3061 ctgctgaagg agagagagta ggatcattgg ctgaccatcc gacgaagcgc gatgcgcatc
     3121 gcggaatggc tgcccggaag gagaccgaca tcagcgtttg cgggccgagg ccgaagtcgc
     3181 ccaggcggcg cctgcgcacg cgacaagcag atcgtgaaga cctgcccgcc gcagcgccgg
     3241 cgtcgaaccg ggcagaggcc gcggagtagg
//
LOCUS       DATAIQ010001102         2530 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_169271, whole genome shotgun sequence.
ACCESSION   DATAIQ010001102 DATAIQ010000000
VERSION     DATAIQ010001102.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2530)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2530)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2530
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_169271"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1235
                     /locus_tag="VHN20_18255"
     CDS             <1..1235
                     /locus_tag="VHN20_18255"
                     /EC_number="3.4.21.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019403218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="Do family serine endopeptidase"
                     /protein_id="HEX2727771.1"
                     /translation="RRFGDDNSRGFGDRFRGGEERGQPRQAPRRFGQAQGSGFFVSGD
                     GYVVTNNHVVDNASSVEVVTDDGRTLDAKVIGTDPKTDIALLKVNEGSNFPHVRFAPD
                     KTRIGDWVVAIGNPFGLGGTVTAGIVSAHGRNIGAGPYDDFIQIDAAVNRGNSGGPTF
                     NLKGEVVGVNTAIASPSGGNVGIAFAIPANVAEKVVDDLKTDGKVSRGFIGVQIQPVS
                     KEIADAIGLKDARGALVAEVTKDSPAGKAGIKTGDAIVAVDGEAIKDARALSMKIASY
                     APGKSVPLTVWRDGKERTVTVAIGGQDADRRARAGADSLSSDEKQPQLGLQLAPSQNG
                     EEGVVVADVDPQGPAAEKGIRKGDVILEVGGQAVARPDDVKNVVDAARKDGRKTVLMR
                     VKGREGVRFVAIGFSRAG"
     gene            1444..2142
                     /locus_tag="VHN20_18260"
     CDS             1444..2142
                     /locus_tag="VHN20_18260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015931932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX2727772.1"
                     /translation="MRILIVEDDREAAAYLNKAFREAGHTADCAHDGLDGYAMAREGS
                     YDVLVVDRMLPKLDGLSLIRSLREQKVDTPVLILSALGQVDDRVKGLRAGGDDYLPKP
                     YAFSELLARLEVLARRRSSSSGAEATAYRVDDLELDRLSHRVTRAGKEIVLQAREFRL
                     LEYLMKHAGQVVTRTMLLEHVWDYHFDPQTNVIDVHVSRLRSKIDKGFERPLIHTVRG
                     AGYVVRAGGEGREA"
     gene            2180..>2530
                     /locus_tag="VHN20_18265"
     CDS             2180..>2530
                     /locus_tag="VHN20_18265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019403216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component sensor histidine kinase"
                     /protein_id="HEX2727773.1"
                     /translation="MTALGKLFRTTAFKLSLAYLFIFTVFAFFILGYVAWSTSRIIDD
                     QIVNTIEAEINGLAEQYRQGGIRRLVNVVERRARQPGASLYLVTTPNGERIVGNVGAL
                     PPGALDRPGQREIDY"
BASE COUNT          421 a          857 c          852 g          400 t
ORIGIN      
        1 tccggcgctt tggcgacgac aattcccgcg gcttcggcga ccgcttccgc ggcggcgagg
       61 agcgcggcca gccgcgtcag gcgccgcgcc gcttcggcca ggcgcaaggc tccggcttct
      121 tcgtgtcggg cgatggctac gtcgtgacca acaaccacgt cgtcgacaac gccagttcgg
      181 tcgaagtggt cacagacgac ggccgcacgc tcgacgccaa ggtgatcggc accgatccga
      241 agaccgacat tgccctcttg aaggtcaacg aagggagcaa tttcccgcat gtccgcttcg
      301 ctccggacaa gacccgcatc ggcgactggg tggtggcgat cggcaatccg ttcgggctcg
      361 gcggcaccgt gacggccggc atcgtctcgg cgcatggccg caacatcggc gccggtccgt
      421 atgacgactt catccagatc gacgcggcgg tgaaccgcgg caattcaggc ggtccgacct
      481 tcaacctcaa gggcgaggtc gtgggcgtca acaccgccat cgcctcgccg tccggcggca
      541 atgtcggcat cgccttcgcg atcccggcca acgtcgccga gaaggtggtc gatgacctca
      601 agaccgatgg caaggtgagc cgcggcttca tcggcgtgca gatccagccg gtgagcaagg
      661 agatcgccga cgcgatcggc ctcaaggacg ccaggggcgc gctcgtcgcc gaggtgacga
      721 aggacagccc ggcgggcaag gccggaatca agacgggcga cgcgatcgtc gccgtcgacg
      781 gcgaggcgat caaggacgcc cgtgcgctct cgatgaagat cgcctcctat gcgcccggca
      841 agagcgtgcc gctcaccgtg tggcgggatg gcaaggaacg caccgtcacg gtcgcgatcg
      901 gcggccagga tgcggaccga cgcgcccggg ccggtgccga ctcgctgtct tccgacgaga
      961 agcagccgca gctcggcctg cagctcgcgc cgtcgcagaa cggcgaggag ggcgtcgtcg
     1021 tcgccgacgt cgacccgcag ggcccggcgg ccgagaaggg catccgcaag ggtgacgtga
     1081 tcctcgaagt cggcggccag gcggtcgcgc ggccggacga cgtcaagaac gtcgtcgatg
     1141 ccgcccgcaa ggacggccgc aagaccgtcc tgatgcgggt caagggccgc gaaggcgtgc
     1201 gtttcgtcgc catcggcttc tcgcgggcag gctgatccag ccatcgggcg tccccccgcc
     1261 cgatcaacgg gatgccgggc agttgtcgta gccccccgcc cggctcggcg tcccgcgctt
     1321 gcggcaggtc ggatcgagat ccggcctgcc gcttttcaca tccaagccgg gagattggcg
     1381 gggaggggct tttttccgga gcgcggtgcc caccaggctg catcatgctt taacatggcc
     1441 cgcatgcgta ttctgattgt cgaagacgac cgcgaggcgg ccgcctatct gaacaaggca
     1501 tttcgcgagg ccgggcatac ggccgactgc gcccatgatg ggctcgatgg ctatgccatg
     1561 gctcgtgagg gcagctacga cgtgctcgtc gtcgatcgca tgctgccgaa gctcgacggc
     1621 ctgtctctga tccgctcgct gcgcgagcag aaggtcgata cccctgtcct cattctgtcg
     1681 gcgcttgggc aggtcgacga ccgcgtcaag ggcctgcgcg ccggcggaga cgactacctt
     1741 cccaagcctt acgccttttc cgagcttctc gcccggctcg aggtgctggc gcgccgacga
     1801 agcagttcgt caggggccga ggcgaccgcc tatcgcgtcg acgatctcga gctcgaccgg
     1861 ctgtcgcacc gcgtgacccg cgccggcaag gagatcgtgc tccaggcgcg cgagttccgc
     1921 ctgctcgaat atctgatgaa gcatgccggg caggtcgtca cgcgcacgat gctgctcgag
     1981 cacgtctggg actatcactt cgatccgcag acgaatgtca tcgacgtgca cgtctcgaga
     2041 ctgcgctcca agatcgacaa gggtttcgaa cgcccgctga tccacaccgt gcgaggcgcg
     2101 ggctacgtgg tgcgcgccgg tggcgagggc cgcgaggcgt gagcgggccg cgcgaccttc
     2161 gccggcgcgg aggcgaccga tgaccgccct cggcaagctg ttccgcacga ccgccttcaa
     2221 gctgtcgctg gcgtatctgt tcatattcac ggtctttgcg ttcttcatcc tcggctacgt
     2281 ggcctggagc accagccgca tcatcgacga ccagatcgtc aacaccatcg aagccgagat
     2341 caacggtctt gcggagcaat accgccaggg tggcatccgt cggctggtca acgtggtcga
     2401 gcggcgcgcc aggcaacccg gcgcgtcgct ttacctggtc acgacgccga atggcgaacg
     2461 catcgtcggc aatgtcggcg cactcccgcc cggcgccctc gaccgcccgg gccagcgcga
     2521 gatcgattac
//
LOCUS       DATAIQ010001103         3687 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_227420, whole genome shotgun sequence.
ACCESSION   DATAIQ010001103 DATAIQ010000000
VERSION     DATAIQ010001103.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3687)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3687)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3687
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_227420"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            94..1122
                     /locus_tag="VHN20_18270"
     CDS             94..1122
                     /locus_tag="VHN20_18270"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEX2727774.1"
                     /translation="MTGLLRTLALVLALALGAPPAGAQSVADFYRGKTVSLIVSSATG
                     GGYDLLARIIAKHLGKHVPGNPAIVVRNMPGAGGIVATNHLYNVAAKDGTVIGGVQAN
                     TPIEPLIGTKEAQYDATKFNWLGSPSTEVGMLVVWHAAPVNTIDDVKRTQISVGASGA
                     NSTPSFYARLLNETLGTKLKIIVGYPGQTEAFLAMERGEVDGYPSVFYSSLMAVRPHW
                     IKDKKAKILVQFGAAPQPEIADVPFAPHLISNADDKLLMEAAFAPLALGRPYLMPPGT
                     PPERVAAMQAALAATFKDAEFLADAKSAALDINAPRDGAQLQEVVERAYRTPPHIVER
                     LRKLQQER"
     gene            complement(1282..2082)
                     /locus_tag="VHN20_18275"
     CDS             complement(1282..2082)
                     /locus_tag="VHN20_18275"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEX2727775.1"
                     /translation="MSIETAEITCGGGMPTFVARPAGGGRHPVVVLMHERYGLVTHTR
                     DLAKKCAGDGFFAVAPNFFFRHPDQKALNAGDSRYDMSDDEAVELIGAALAAAADDKG
                     ADKERVAVAGYCQTGRHPLVFAAERPITAAVVWYGAASKREWPVSKLNAKPLEEIIAA
                     LDCPVFGAFGAADHIISMDDVRRFRNALEEHRKTYEIHVYAGAPHGWLNDTMPGRYRA
                     PQADAGWADQQRFLKEVLGTGARTDNVRWHFVSEVERDYDFSKNVRLE"
     gene            2359..3582
                     /gene="ribB"
                     /locus_tag="VHN20_18280"
     CDS             2359..3582
                     /gene="ribB"
                     /locus_tag="VHN20_18280"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013418415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008686 -
                     3,4-dihydroxy-2-butanone-4-phosphate synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3,4-dihydroxy-2-butanone-4-phosphate synthase"
                     /protein_id="HEX2727776.1"
                     /translation="MVMTSEAAASALSPIEEVIEDARNGRMFILVDDESRENEGDLII
                     PGEKASPEAINFMAKNARGLVCLAMTRERVDKLGLQLMAPRNQTRHQTAFTVSIEARE
                     GVTTGISAADRAHTISVAINHNRGREDIVSPGHVFPLIAQDGGVLVRAGHTEAAVDVA
                     RLAGLNPSGVICEIMNDDGTMARMPDLMKFAQKHGLKIATIADLIAYRRRTEQLVERI
                     HETTINSRFGGRFKALIYATKIGYIEHVALVKGDISGDEPVLVRMHQHSILADSLGDM
                     TTSQFFGGEARARGGELEACMRLIAEKDRGVVVIIREPTPTSLSRSLREREGQAMRTP
                     IAQLRQFGIGAQILLDLGVRDMVLLSNTKRTIIGLDGYGLHVIDQQPIPDLPDDPERP
                     PGHDTVAGDLPPTLK"
BASE COUNT          630 a         1301 c         1218 g          538 t
ORIGIN      
        1 gcgccgacct cctgctcgac ggcggttacc ttgccttcaa ggggacgcgg tcgctacagt
       61 ccggggcaaa cgatacgtag cggagggacg aggatgaccg ggttgctgcg gacgctcgcg
      121 ttggtgctgg cattggcgct cggcgcgccg ccggccggcg cccagtcggt ggccgacttc
      181 taccgcggta agaccgtctc gctgatcgtc agctcggcga ccggcggcgg ctacgacctc
      241 ctggcgcgca tcatcgccaa gcatctcggc aagcacgttc ccggcaatcc ggcgatcgtc
      301 gtgcggaaca tgcccggggc cggcggcatc gtcgcgacca accacctcta caacgtcgcc
      361 gccaaggacg gcacggtgat cggcggcgtg caggccaaca caccgatcga gccgctgatc
      421 ggcaccaagg aagcgcaata cgacgcgacc aagttcaact ggctcggctc gcccagcacc
      481 gaggtcggca tgctcgtggt ctggcacgcg gcgccggtca acaccattga tgacgtcaag
      541 cgcacgcaga tctcggtcgg cgcctcgggc gccaattcca ccccaagctt ctacgcgcgg
      601 ctgctcaacg agacgctcgg caccaagctg aagatcatcg tcggctatcc cgggcagacg
      661 gaagcgttcc tggccatgga acgcggcgag gtcgacggct acccgagcgt cttctactcg
      721 tcactgatgg cggtgcggcc gcactggatc aaggacaaga aggccaagat cctcgtccag
      781 ttcggcgccg cgccgcagcc cgagatcgcc gacgtgcctt tcgcgccgca cctgatcagc
      841 aacgccgacg acaagctcct gatggaagcg gcctttgcgc cgctggcgct cggccggccg
      901 tatctgatgc cgccgggcac gccgcccgag cgcgtcgccg ccatgcaggc ggcgctcgcg
      961 gcgaccttca aggatgccga attcctcgcc gacgccaagt cggcagcgct cgacatcaac
     1021 gcgccgcgcg acggcgccca gctgcaggaa gtggtcgagc gcgcctacag gacgcccccg
     1081 catatcgtcg agcgcctgcg caagctccag caggagcgat aagcgggcgc acgacgcgcg
     1141 gctcatggcc gggcttgtcc cggccatctc ggtcggaaag gcgcgtttcg tgatcgagat
     1201 aaccgggacg agcccggcga cggcagcatg ggagtggcga agcagcagca cccgagcgtc
     1261 gcatccgtcc aagcggcgcc gtcactcgag acgcacgttc ttggaaaaat cgtagtcgcg
     1321 ctcgacctcg ctgacgaagt gccagcgcac gttgtcggtg cgtgcgccgg tccccagcac
     1381 ctccttgagg aagcgctgct ggtcggccca gccggcatcg gcctgcggcg cgcggtagcg
     1441 gcccggcatg gtgtcgttga gccagccgtg cggcgcgccc gcatagacgt ggatctcgta
     1501 agtcttgcgg tgctcctcga gggcgttgcg gaagcggcgc acgtcgtcca tcgagatgat
     1561 gtggtcggcg gcgccgaacg cgccgaagac cgggcaatcg agcgccgcga tgatctcctc
     1621 gagcggcttc gcattcagct tgctgaccgg ccattcgcgc ttcgaggcgg cgccgtacca
     1681 gaccaccgcc gccgtgatcg gccgctcggc cgcgaagacg agcggatggc gcccggtctg
     1741 gcagtagcct gccaccgcga cgcgctcctt gtcggcgccc ttgtcgtcgg ccgccgcggc
     1801 cagcgccgcc ccgatcagct cgaccgcctc gtcgtcgctc atgtcgtagc gggaatcacc
     1861 cgcgttcagc gccttctggt ccgggtggcg gaagaagaaa ttgggcgcca cggcgaaaaa
     1921 cccgtccccg gcacatttct tcgcgaggtc gcgggtatgc gtgacgagcc cgtagcgctc
     1981 gtgcatcagc accaccacgg ggtgccgtcc gccccctgcc ggccgcgcca cgaaggtcgg
     2041 catgccgccg ccgcaagtga tctccgctgt ctcgatgctc atgctgtttc cccaccctcg
     2101 agcgtgtatg cccccgctcg gtgccccgta atgcccggac agcgcgaagc gcttgctgcg
     2161 ggtacgggca tccacgcggg ccgtgctgcc tcagccgtgg gtagattggc ggggcgaggc
     2221 cggcaacgac aaaaacagga ccgatcgccc gcgcggcggt gccgtggaca aacggcgcat
     2281 atcgaactac gggtcgacac ggtttttcgg cccgcgaagc aggaaggggt ccggcgcgtc
     2341 cgggaaggtc actggtccat ggtcatgacg tctgaagccg ccgccagcgc gctctccccg
     2401 atcgaggagg tgatcgagga cgcccgcaac ggccgcatgt tcatcctggt cgacgacgag
     2461 tcgcgcgaga acgagggcga cctgatcatc ccgggcgaga aggcgtcccc cgaggccatc
     2521 aacttcatgg ccaagaatgc ccgcggcctc gtctgcctgg cgatgacccg cgagcgggtc
     2581 gacaagctcg gcctgcagct gatggccccg cgcaaccaga cccggcacca gaccgccttc
     2641 acggtctcga tcgaggcgcg cgaaggcgtc accaccggca tctcggccgc cgaccgcgcc
     2701 cacacgatct cggtcgccat caaccacaac cgcggccgcg aggacatcgt ctcgcccggg
     2761 cacgtgtttc cgctgatcgc gcaggacggc ggcgtgctgg ttcgcgccgg ccataccgag
     2821 gcggccgtcg acgtggcgcg tctcgccggg ctcaacccgt cgggcgtgat ctgcgagatc
     2881 atgaacgacg acggcaccat ggcgcgcatg ccggacttga tgaagttcgc gcagaagcac
     2941 gggctcaaga tcgccaccat cgccgacctg attgcctacc gccgccgcac ggagcagctg
     3001 gtcgagcgca tccacgagac gaccatcaac agccgcttcg gcggccgttt caaggccctc
     3061 atctacgcca ccaagatcgg ctacatcgag cacgtggcgc tggtcaaagg cgacatatcg
     3121 ggcgacgagc cggtgctcgt gcgcatgcac cagcacagca tcctggccga cagcctcggc
     3181 gacatgacca cgagccagtt cttcggcggc gaggcgcgcg cccgcggcgg cgagctcgag
     3241 gcgtgcatgc gcctgatcgc cgagaaggac cgcggcgtcg tggtgatcat ccgtgagccg
     3301 acgcccacca gcctcagccg ttcgctccgc gaacgcgaag gccaggccat gcgcacgccg
     3361 atcgcgcagc tgcgccagtt cggcatcggc gcccagatcc tgctcgatct cggcgtgcgc
     3421 gacatggtcc tgttgtcgaa caccaagcgc accatcatcg gccttgacgg ctatggcctg
     3481 catgtcatcg atcagcagcc gatccccgat ctgccggacg accccgagcg gccccccggg
     3541 cacgacacgg tcgccggaga cctcccgccg accttgaagt gagagtgatg aacgagaaac
     3601 gcgccaaaga agagccgcaa ggccttgtcg acctgggtgg aatcaagatc gaagtggagc
     3661 ggcgcggccg cggggcgccc ctgctgc
//
LOCUS       DATAIQ010001104         3075 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_77289, whole genome shotgun sequence.
ACCESSION   DATAIQ010001104 DATAIQ010000000
VERSION     DATAIQ010001104.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3075)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3075)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3075
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_77289"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(29..1042)
                     /locus_tag="VHN20_18285"
     CDS             complement(29..1042)
                     /locus_tag="VHN20_18285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HEX2727777.1"
                     /translation="MTASLAQAATPLDDAIIRNAETTLETVGRARDAIQAVIFGQEHV
                     VNLALVTILSGGHGLLVGVPGLAKTKLVETLGTVLGLDARRVQFTPDLMPSDILGSEV
                     LDESADRRRSFRFVKGPIFAQLLMADEINRASPRTQSALLQAMQEHHVSIGGERHDLP
                     RPFHVLATQNPIEQEGTYPLPEAQLDRFLVEIDIGYPDRAAERRILIETTGADDYRPQ
                     AVMSAEIVLNAQRLVRRLPVGDSVVEAILDLVRAARPEDGEREIVDKLLWGPGPRASQ
                     ALMLAVRARALLEGRLAPSIDDVVSLAEPVLKHRMALTFAARADGETIPAIIRRLTAR
                     LGG"
     gene            1271..1885
                     /locus_tag="VHN20_18290"
     CDS             1271..1885
                     /locus_tag="VHN20_18290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012564141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1285 domain-containing protein"
                     /protein_id="HEX2727778.1"
                     /translation="MAGQPITFSAEGAEGGALDRLSAAAGAARGKGLPPVARWNPPFC
                     GDIAMRIAADGTWFYNGTPIGRPALVKLFASILRKDPDRFVLVTPVERVGIAVDDAPF
                     LAVEMAVEGEGGDRSIAFRTNVDDLVAVDAAHPLRFEKDEGGGIKPYVRVRGDLWALV
                     TRPLTYDLIELGEDRDCDGEAMFGVAVGDAFFPIARAADKAASS"
     gene            1882..2523
                     /locus_tag="VHN20_18295"
     CDS             1882..2523
                     /locus_tag="VHN20_18295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0010945 - coenzyme A diphosphatase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA pyrophosphatase"
                     /protein_id="HEX2727779.1"
                     /translation="MTVASVLADDFIDRARRLLRAEPPGPHEPRADPKGDPAIDEVRL
                     LINGEAKAAAVLVPVVTRAEGMMVLLTERATGLRAHSGQIAFPGGRMDDGDPSPVAAA
                     LREAEEEIGLDAAHVRPLGYLDAYLSSTGYLVTPVVGLVAPTLSLRLNRDEVNDAFEV
                     PLGFLMDPTKHEIHSREWNGRQRRYYAIPFGERYIWGVTAGIIRNLYERLYQT"
     gene            2520..2777
                     /locus_tag="VHN20_18300"
     CDS             2520..2777
                     /locus_tag="VHN20_18300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012334206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6111 family protein"
                     /protein_id="HEX2727780.1"
                     /translation="MIRAILGEALVFLLPFAVFALFLVLRRQNPLTPAAWSDSVGWLV
                     IAGLASVVIALLVTGLAGERHTGPFEPPHLENGRLVPGQFR"
     gene            2786..>3075
                     /locus_tag="VHN20_18305"
     CDS             2786..>3075
                     /locus_tag="VHN20_18305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CCA tRNA nucleotidyltransferase"
                     /protein_id="HEX2727781.1"
                     /translation="MDEKSLADLLRQAPLEKLLGVLDGDGEETRVVGGAVRNALLGQR
                     VDEVDLATTATPGVVSERATRAGFKAVPTGIEHGTVTVVVDGTPFEVTTLRE"
BASE COUNT          459 a         1049 c         1068 g          499 t
ORIGIN      
        1 aagaacccgg acccgggcca tcgatgcctc agccgccgag ccgcgccgtc aggcgacgga
       61 tgatggcggg gatcgtctcc ccgtcggcac gcgccgcaaa ggtgagggcc atgcgatgct
      121 tgagaaccgg ctcggcaagg ctcacgacgt cgtcgatcga cggcgccagc cgcccctcga
      181 gcagcgcgcg cgcgcgcacc gccagcatga gcgcctggct ggcacgggga cccggccccc
      241 agagcagctt gtcgacgatc tcgcgttcgc cgtcctccgg gcgagccgcc cggaccagat
      301 cgaggatcgc ctcgacgacg ctgtcgccca ccggaagccg ccgcacgagc cgctgtgcgt
      361 tgaggacgat ctcggccgac atgacggcct gcggccgata gtcgtcggcg ccggtcgtct
      421 cgatcaggat gcgccgctcg gcggcgcggt ccgggtagcc gatgtcgatc tccaccagaa
      481 agcggtcgag ctgtgcttcg ggaagcggat aggtcccctc ctgctcgatc ggattctgtg
      541 tcgcgagcac gtggaacggt cgcggcagat cgtggcgctc gccgccgatc gagacgtggt
      601 gctcctgcat ggcctggagc agggccgact gcgtgcgcgg gctggcgcgg ttgatctcgt
      661 cggccatcag cagctgcgcg aagatcgggc ccttcacgaa gcggaacgag cgccgccggt
      721 cggcgctttc gtcgagaact tcggacccca ggatgtcgga cggcatcaga tcgggcgtga
      781 actgcacccg ccgcgcgtcg agcccgagca ccgtgccgag cgtctcgacg agcttggtct
      841 tggcaaggcc gggcacgcca acgagaaggc catggccgcc ggacaggatc gtgaccaggg
      901 caagattgac gacgtgctcc tgtccgaaga tcaccgcctg gatggcatcg cgcgcgcgcc
      961 cgacggtctc gagggtggtt tccgcgttgc ggataatggc gtcgtcgagg ggcgttgctg
     1021 cctgggcgag gctcgccgtc atgcgggtgt ctccaagaat cagttgtcgc cggccgcgtc
     1081 atcgatactg tgagcgtcga tgcgaccggg tggcaagcgg gctacctggc cccgggactc
     1141 cggggatgcc cgcaacacat ggcggttgtg ctatcgtgct ccaatgctgg tccccatgac
     1201 ttattgtcgc cctgcaccag agacccggat tcgcacttca tcaaggcgcg atcgccgctt
     1261 ttaaagtgtc atggcgggac aaccgatcac tttttcggca gagggcgccg agggcggcgc
     1321 cctcgatcgc ctcagcgccg cggcaggcgc cgcacgcggc aagggcctgc cgcccgtcgc
     1381 gcgctggaac ccgccgttct gcggtgacat cgccatgcgc atcgctgccg acggcacatg
     1441 gttctacaac ggcacgccga tcggcaggcc ggcgctcgtc aagctgttcg cctcgatcct
     1501 gcgcaaggac ccggaccgtt tcgtgctggt gacgccggtc gagcgcgtcg gcatcgccgt
     1561 cgacgacgcg ccgttccttg ccgtcgaaat ggcggtggaa ggggagggcg gcgaccgctc
     1621 catcgccttc cgcaccaatg tcgacgacct cgtcgcggtc gatgcggcgc accctttgcg
     1681 cttcgagaag gacgagggag gcggcatcaa gccgtatgtg cgcgtgcgcg gcgacctgtg
     1741 ggcgctggtc acgcggccgc tcacctacga cctgatcgag ctcggcgaag accgcgactg
     1801 cgacggagag gccatgttcg gcgttgccgt gggcgacgcc ttcttcccga tcgcgcgggc
     1861 ggcagacaag gccgcctcgt catgaccgtg gcatccgtcc tggcagacga tttcatcgac
     1921 cgcgcccgcc ggctgctgcg ggcggagccg cccgggccgc atgagccgcg cgccgatccc
     1981 aagggagacc ctgccatcga cgaggtcagg ctcctgatca acggcgaggc gaaggcggcc
     2041 gccgtcctgg tgcctgtcgt cacacgggcg gagggcatga tggtcctcct gacggagcgg
     2101 gcaacggggc tgcgcgccca ttccgggcag atcgccttcc cgggcggccg gatggatgac
     2161 ggcgacccct ctccggtcgc tgccgccctg cgtgaagccg aggaggagat cggtctcgat
     2221 gcggcgcatg tgcgcccgct cggctatctc gacgcctatc tgtcctcgac cggctatctc
     2281 gtgacgccgg tggtcgggct cgtcgcgccc accttgtccc tgcgcctcaa ccgcgacgag
     2341 gtgaacgatg cattcgaggt tccgctcggc ttcctgatgg acccgaccaa gcacgagatc
     2401 cacagccgcg aatggaacgg ccggcagcgc cgctattatg caattccgtt cggcgaacgc
     2461 tatatctggg gcgtgaccgc cggcatcatc cgcaatctct acgagaggct ttaccagaca
     2521 tgatcagggc tatcctcggt gaggccctcg tttttctcct gccttttgct gttttcgcgc
     2581 ttttcctcgt gttgcgacgg cagaacccgc tcaccccggc cgcatggagc gactcggtcg
     2641 ggtggctcgt gatcgccggc ctcgcctccg tggtgatcgc gctgctcgtc acgggcctcg
     2701 ccggcgagcg ccataccggt ccgttcgagc cgccgcatct cgagaacggg cgcctcgtcc
     2761 cggggcagtt ccggtgagcg cggcggtgga cgagaaatcc ctcgccgacc tgctgcggca
     2821 ggcgccgctc gaaaagcttc tcggcgtcct cgacggcgac ggcgaggaga cgcgcgtcgt
     2881 gggcggcgcc gtccgcaacg cgcttctcgg gcagcgggtc gacgaggtcg acctcgccac
     2941 gacggcgacg ccgggcgtgg tgagcgagcg ggccacgcgg gccggcttca aggccgttcc
     3001 aaccgggatc gagcacggca ccgtcacggt ggtcgtcgac gggacgccgt tcgaggtcac
     3061 gacactgcgc gagga
//
LOCUS       DATAIQ010001105         2020 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_271566, whole genome shotgun sequence.
ACCESSION   DATAIQ010001105 DATAIQ010000000
VERSION     DATAIQ010001105.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2020)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2020)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2020
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_271566"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..838
                     /gene="nuoF"
                     /locus_tag="VHN20_18310"
     CDS             <1..838
                     /gene="nuoF"
                     /locus_tag="VHN20_18310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008876526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoF"
                     /protein_id="HEX2727782.1"
                     /translation="GWPFDLYVHHGAGAYICGEETALLEGLEGKKGMPRLKPPFPANM
                     GLYGCPTTVNNVESIAVAGTILRRGGAWFASLGKPNNTGTKLFCVSGHVNKPCNVEEA
                     MGISFRELIDRHCGGMRGGWDNLLCSIPGGSSVPLVPAEQIIDASMDFDTLRNLKSGL
                     GTAAVIVLDKSTDIVRAIARISYFYKHESCGQCTPCREGTGWMWRVLSRMADGRAQRR
                     EIDMLLDVTYQVEGHTICALGDAAAWPIQGLIRHFRGEIEKRIDQYAANPHLEPVAIA
                     AE"
     gene            857..>2020
                     /gene="nuoG"
                     /locus_tag="VHN20_18315"
     CDS             857..>2020
                     /gene="nuoG"
                     /locus_tag="VHN20_18315"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015821653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050136 - NADH dehydrogenase (quinone)
                     activity [Evidence IEA];
                     GO_process: GO:0006120 - mitochondrial electron transport,
                     NADH to ubiquinone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoG"
                     /protein_id="HEX2727783.1"
                     /translation="MTKLIVDGIEIDVPQDYTLLQACEAAGAEIPRFCFHERLSIAGN
                     CRMCLVELKGAPKPVASCAWGVRDCRPGPNGEPPVVNTRTPVVKKAREGVMEFLLINH
                     PLDCPICDQGGECDLQDQAMAYGIDTSRYHENKRAVEDKYIGPLVKTSMNRCIHCTRC
                     VRFVAEVAGVEDLGAIGRGEDMEITTYLERAMRSELQANVADLCPVGALTHKPQAFNV
                     RPWELSKTPSVDVMDAVGCAIRVDARGREVMRILPRVNEAVNEEWISDKTRQVVDGLR
                     LQRLDRPFVRDNGRLRPASWQEAFGVIARRMQGVDPRRVGAIVGDLPAVEEIFALKLL
                     MQSLGVANLDCRQDGAKLDPALGRASYLFNGTIEGIERADAILLIGTNPRLEGA"
BASE COUNT          352 a          677 c          672 g          319 t
ORIGIN      
        1 cggctggccg ttcgacctct acgtccatca tggcgcgggg gcctatatct gcggcgagga
       61 aacggccctg ctcgaaggcc tcgaaggcaa gaagggcatg ccgcggctca agccgccatt
      121 cccggccaat atgggcctgt acgggtgtcc gacgacggtc aacaacgtcg agtcgatcgc
      181 cgtcgccggc acgatcctgc gccgcggcgg cgcctggttc gcgagcctcg gcaagccgaa
      241 caacaccggc acgaagctgt tctgtgtctc cggccacgtc aacaagccgt gcaacgtgga
      301 agaggcaatg ggcatcagct tccgcgagct gatcgaccgg cattgcggcg gtatgcgcgg
      361 gggctgggac aatctgttgt gctcgatccc gggcggttcg tcggtgccgc tggtcccggc
      421 cgagcagatc atcgacgcgt cgatggattt cgacaccctg cgcaatctga agtcgggcct
      481 cggcaccgcg gccgtgatcg tgctcgacaa atccaccgat atcgtgcggg cgatcgcgcg
      541 catctcctac ttctacaagc acgagagctg cggccagtgc acgccgtgcc gtgaaggcac
      601 cggctggatg tggcgcgtgc tctcgcgcat ggccgacggc cgggcgcagc ggcgcgagat
      661 cgacatgctg ctcgacgtca cctaccaggt cgagggccac accatctgcg ccctgggcga
      721 tgcggcggcg tggccgatcc agggcctgat ccggcacttc cgcggcgaga tagagaaacg
      781 catcgaccaa tacgccgcca atccgcatct cgagcccgtc gcgatcgcag cggaataagg
      841 gtcacaggaa aacggcatga ccaagctcat cgtcgacggc atcgagatcg acgtcccgca
      901 ggactacacg ctgctgcagg catgcgaggc ggcgggcgcc gagatcccgc gcttctgctt
      961 ccacgagcgt ctctcgatcg ccggcaactg ccgcatgtgc ctcgtcgagc tgaagggcgc
     1021 gcccaagccc gtcgcgtcct gtgcctgggg cgtgcgcgac tgccgtcccg gcccgaacgg
     1081 cgagccgcca gtcgtcaaca cgcgcacgcc ggtggtcaag aaggcgcgcg aaggcgtgat
     1141 ggagttcctg ctgatcaatc accccctcga ttgcccgatc tgcgaccagg gcggcgagtg
     1201 cgacctgcag gaccaggcca tggcctacgg catcgacacc tcgcgctatc acgagaacaa
     1261 gcgcgcggtg gaggacaaat atatcggccc gctggtcaag acctcgatga accggtgcat
     1321 ccattgcacc cgctgcgtgc gcttcgtcgc cgaggtggcg ggggtcgagg atctcggcgc
     1381 catcggccgc ggcgaggaca tggagatcac cacgtatctc gagcgcgcca tgcgttcgga
     1441 actccaggcc aacgtcgccg atctttgccc ggtcggcgcg cttacgcaca agccgcaggc
     1501 cttcaacgtg cgcccgtggg aactctccaa gaccccgtcg gtcgatgtca tggacgcggt
     1561 cggctgcgcc atccgcgtcg atgcgcgcgg ccgcgaggtg atgcgcatcc tgccgcgtgt
     1621 caacgaggcg gtgaacgagg agtggatctc ggacaagacg cgccaggtcg tcgacggact
     1681 gcgcctgcaa cggctcgacc ggccattcgt ccgcgacaac ggcaggctgc gcccggcctc
     1741 ctggcaggag gcgttcggcg tgatcgcccg ccgcatgcaa ggcgtcgacc cgagacgcgt
     1801 cggtgcgatc gtcggcgacc tgcctgcggt cgaggagatc tttgccctga agctgctgat
     1861 gcagagcctc ggcgtcgcca acctggactg ccggcaggac ggcgccaagc ttgatccagc
     1921 gctcggccgt gcgagctatc tgttcaacgg caccatcgag ggcattgaac gggccgatgc
     1981 cattttgctg attggcacca atccgcgcct ggaaggcgcc
//
LOCUS       DATAIQ010001106         1543 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_227556, whole genome shotgun sequence.
ACCESSION   DATAIQ010001106 DATAIQ010000000
VERSION     DATAIQ010001106.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1543)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1543)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1543
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_227556"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(16..795)
                     /locus_tag="VHN20_18320"
     CDS             complement(16..795)
                     /locus_tag="VHN20_18320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015823191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1499 domain-containing protein"
                     /protein_id="HEX2727784.1"
                     /translation="MRRLIIEEPVTRFAQWALPVAWFALAVTAIAVALIRFQFVEFFP
                     GFVALAAGLFLAIEAAGLSFIAFVRIWREGRRGLGRAVKALVLAMAILAYPGWFGLKA
                     LTLPPLTDVSTDIVDPPTFSRSRAALEARGGRIPPDVAPELRRLQREAYPQIAPLTLD
                     IPPDQVYELVRRAAQNRKWEIIESARPGGRVGLGRLDAVDRTFLLRIADDVTVRIRPR
                     ADGARIDVRSASRVGQHDLGQNAKRIQRFLEEVSNLAIAVR"
     gene            1096..>1543
                     /locus_tag="VHN20_18325"
     CDS             1096..>1543
                     /locus_tag="VHN20_18325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEX2727785.1"
                     /translation="MPQPQGVRAAEAAAPLQVWFRFIRLHRRVSAAIASELKALGLSI
                     PQFDILSTLTEREGFTQQELAAHLYVTKGNVSGLVDRLVEAGLVERRAIPGDRRSHAL
                     HLTRAGRALAEQGIAAQEAYVRRTLGRLSRADLAELNRIVLAWRETA"
BASE COUNT          254 a          530 c          539 g          220 t
ORIGIN      
        1 cacggctcgt attgctcacc gcacggcgat ggccaggttg gagacctctt cgaggaagcg
       61 ctggatgcgc ttggcgttct ggccgaggtc gtgctgcccg acgcgcgagg cggagcgcac
      121 gtcgatgcgc gccccgtcgg cgcgcggccg gatgcgcaca gtgacgtcgt cggcgatgcg
      181 caacaggaag gtgcggtcga cggcatcgag gcggccgagc ccgacgcggc cgcccgggcg
      241 cgccgattcg atgatctccc atttgcggtt ctgcgcggcg cgccgcacca gctcgtagac
      301 ctgatcgggc gggatatcga gggtgagcgg ggcgatctgc ggatacgcct cgcgctgcag
      361 gcgtcgcagc tccggcgcca cgtccggcgg aatgcgcccg ccgcgcgcct cgagcgccgc
      421 gcgcgaacgc gagaaggtgg gcggatcgac gatgtcggtg gacacgtcgg tgagcggcgg
      481 cagggtcagc gccttgagcc cgaaccagcc gggataggcg agaatggcca tcgccagcac
      541 cagggctttc acggcgcgtc cgaggccgcg tcggccctcg cgccagatgc gcacgaaggc
      601 gatgaaagac aggccagcgg cctcgatcgc caggaacagc cccgccgcca acgccacaaa
      661 accgggaaag aactcgacga actggaagcg gatcagggcc acggcgatgg ccgtgacggc
      721 gagcgcgaac caggcgacgg gcagcgccca ctgggcgaag cgggtgacgg gttcttctat
      781 gatcagacgg cgcatcggct cgctctacag aggctctcgg gggcgcgcca ctttttatcg
      841 tccaaggctg gcgccgggcg ccgggatcct gcctcgataa ggcgccgagg ttaacctttc
      901 gcaacccgcg ccctcagcat ggcccggcaa agcgcgcccc gctttgctga aaaaggtcat
      961 gcgcaaacca gggagaaccg gatcgtttcg catggaatgg accctgttcg gacccgttag
     1021 ggacgctggc aggtcaggct ggcggcaaga tagttcttat gtaaactatc tcgccaggac
     1081 cgatctcagc tcgccatgcc ccagccccaa ggcgtccgcg ccgcggaagc agccgcaccg
     1141 ttgcaggtct ggttccgctt catccgcctg catcgccggg tgtcggcggc gatcgcgtcg
     1201 gagctcaagg cactcggatt gtcgatcccg caattcgata tcctctcgac cctgacggag
     1261 cgcgagggct tcacccagca ggagctcgcg gcgcatctct acgtcaccaa gggcaacgtc
     1321 tcgggcctcg tcgaccggct ggtggaggcc gggctggtgg agcgccgcgc catccccggc
     1381 gaccggcgct cgcacgccct gcacctgacg cgcgcaggcc gcgccctcgc cgagcagggc
     1441 atcgccgccc aggaggccta tgtgcggcgc accctcggcc gtctgtcgcg cgccgatctc
     1501 gccgagctca accgcatcgt gctcgcctgg cgcgagacgg ccc
//
LOCUS       DATAIQ010001107         1512 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_227635, whole genome shotgun sequence.
ACCESSION   DATAIQ010001107 DATAIQ010000000
VERSION     DATAIQ010001107.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1512)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1512)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1512
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_227635"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..753
                     /locus_tag="VHN20_18330"
     CDS             <1..753
                     /locus_tag="VHN20_18330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727786.1"
                     /translation="DGSAILAATNASLILPLYGSSVAQYDPRKFEWIGSVFKQQAICV
                     SWHNVPVKTLEDATRREITMGATGVSGGPGVFPRILNTMVGTKFKLITGYTTGDMRLA
                     LEKGEVDGICGLAWQTYKTVSRDWIDNKKINIFAQMGLEKHPDLPHVPQAFEMIKNPA
                     DRQVLELLVVPQEFGRPFVAPPGVPEERMAIYRKAFQAILKDEQFLADLARQGGSVEA
                     LDDKQIQALLERAYAAPKEIRDRAGEYAASMN"
     gene            complement(782..>1512)
                     /locus_tag="VHN20_18335"
     CDS             complement(782..>1512)
                     /locus_tag="VHN20_18335"
                     /inference="COORDINATES: protein motif:HMM:NF036686.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727787.1"
                     /translation="GARATPVARIGVILPTSNRMIEPQLPHYAPANLAVHFARAQLTG
                     RWRKPVAELAPEVARAAVTLADARPDLIVFNCTSTSMKEGAAGDARLLATIRDATGIE
                     ALSTAGAIVDALAALRMRRIVLITPYVQATNDHEIVYFREMGVEVAHDVALGLSGGDE
                     FIQVPARRWIELAAANDRADSAGFLLACTNTTQIEAVDAIEEATRKPVVSSNQAVLWA
                     AVRHLRTKISALAPGHVPGCLNFV"
BASE COUNT          250 a          517 c          530 g          215 t
ORIGIN      
        1 gacggctcgg cgatcctcgc cgccaccaac gcgtcgctga tcctgccgct ctacggatca
       61 tccgtcgcgc aatacgaccc gcgcaaattc gagtggatcg gcagcgtctt caagcagcag
      121 gcgatctgcg tcagctggca caacgtgccc gtcaagacgc tcgaggacgc cacgcggcgc
      181 gagatcacca tgggggcgac cggcgtcagc ggcgggcccg gcgtcttccc gcgcatcctc
      241 aacaccatgg tcgggacgaa gttcaagctg atcaccggct acaccaccgg cgacatgcgc
      301 ctcgcgctcg agaagggcga ggtcgacggc atctgcgggc tcgcgtggca gacctacaag
      361 accgtcagcc gcgactggat cgacaacaag aagatcaaca tcttcgcgca aatgggcctc
      421 gagaagcatc ccgacctgcc gcatgtcccg caggccttcg agatgatcaa gaacccggcc
      481 gacaggcagg tgctcgagct gctcgtggtg ccgcaggaat tcgggcgccc gttcgtcgcg
      541 ccgcccggcg tgccggagga gcgcatggcg atctatcgca aggcgttcca ggcgattctc
      601 aaggacgagc agttcctcgc cgacctcgcc cgccagggcg gcagcgtcga ggcgctcgac
      661 gacaagcaga tccaggcgct gctcgagcgc gcctacgcgg ccccgaagga gatccgcgac
      721 cgcgccggcg aatatgcggc gagcatgaac tgacgcccgt tcggatcagg acgccgcgac
      781 gtcagacgaa gttgaggcag ccggggacgt gccccggcgc cagggccgag atcttcgtgc
      841 gcaggtgacg gaccgcggcc cacagcaccg cctggttgct gctcaccacc ggcttgcgcg
      901 tcgcctcctc gatggcgtcg accgcctcga tctgggtggt gttcgtgcag gcgagcagga
      961 agccggcgct gtcggcgcgg tcgttggcag ccgcaagctc gatccagcgg cgcgccggca
     1021 cctggatgaa ttcgtcgccg ccgctcagcc cgagcgcgac gtcgtgcgcg acctcgacgc
     1081 ccatctcgcg gaagtagacg atctcgtggt cgttggtcgc ctgcacgtaa ggcgtgatca
     1141 ggacgatcct gcgcatgcgc agcgcggcga gggcgtcgac gatcgcgccg gccgtggaga
     1201 gcgcctcgat gccggtggcg tcgcggatcg tggcgagcag gcgggcgtcg ccggcggcgc
     1261 cttccttcat cgacgtcgac gtgcagttga acacgatcag gtcgggcctg gcgtcggcga
     1321 gcgtgacggc ggcgcgcgcc acctcgggcg cgagctcggc gacgggcttc cgccagcgcc
     1381 cggtgagctg cgcccgcgcg aaatgaaccg cgagattggc cggcgcataa tgcggaagct
     1441 gcggctcgat catgcggttg ctggtcggca ggatcacgcc gatgcgcgcg acgggcgtcg
     1501 cccgcgcgcc gg
//
LOCUS       DATAIQ010001108         3107 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_169393, whole genome shotgun sequence.
ACCESSION   DATAIQ010001108 DATAIQ010000000
VERSION     DATAIQ010001108.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3107)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3107)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3107
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_169393"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(72..905)
                     /locus_tag="VHN20_18340"
     CDS             complement(72..905)
                     /locus_tag="VHN20_18340"
                     /EC_number="4.1.2.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018699680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="p-hydroxycinnamoyl CoA hydratase/lyase"
                     /protein_id="HEX2727788.1"
                     /translation="MADKAYENVKIEREDGITWVILNRPDKRNAMSPALHYEMEDALT
                     RLVSDSETKVLVLTGAGESWCAGQDIKTYFRETTNDPEERRRSNAASHHWRWDILRTF
                     PKPTIAMVNGYCFGAAFTQLHAVDFAIAAEDAVFGLSEVNWGIIPGGIVSWNLTELML
                     PRHAMYYAVTGEPFDGKRAVELGLANFAVPKERLRDETVALARKLMKLNPGVVRYTKE
                     AMRAVHGMSHEQARDYLRSKQDSLSRNDKEIRERVGMTEFLDEKSYRPGLGPYQRGKN
                     T"
     gene            complement(920..2077)
                     /locus_tag="VHN20_18345"
     CDS             complement(920..2077)
                     /locus_tag="VHN20_18345"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX2727789.1"
                     /translation="MDFELPEELRLLQDTVRRFVDNELIPLEGQSLDGPELRPEIETK
                     LTARCQELGLWQIDVPEEYGGQGLGLVGRALVWAELGRTVALPTRGVRILGPEVRPVL
                     YALEGEMRERYLLPTIRGEKESCFAQTEPDAGSDPGSMRTTAVRDGDHYVINGVKRFI
                     TRADKADFMILMAATDRAKGSRGGISCFIVDMDTPGVTLGASYETLTGERPWEIVLED
                     VRVAADHLVGEEGGGFKLAQGWLGVGRVKQGARALGATRRCLELAATYATQRVTFGKP
                     LSERQNTQWQLTDTYVALEAATLLVYRAAAKFDRGDDNRNDAYLAKLFCTEMAWKAAD
                     MCLQLHGGIGLTTALPIERLWRDQRSHMITEGTPEMMRVALARHVLKTFAS"
     gene            2241..3032
                     /locus_tag="VHN20_18350"
     CDS             2241..3032
                     /locus_tag="VHN20_18350"
                     /inference="COORDINATES: protein motif:HMM:TIGR02431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator C-terminal
                     domain-containing protein"
                     /protein_id="HEX2727790.1"
                     /translation="MRRIVVDNAVVTEDDPDFVAALSRGLSVIRAFSGQQEKMTLAEV
                     ARVVGLSRATTRRCLLTLQALGYVHMTGREFQVAPKVLTLAQAYLSSSLLPRIAPPFL
                     ERISEKLGESCSVSVLSGNEVVYVARSKSRRMSAMMRDVGSHQPAYCTSMGRVLLAAL
                     SAAELDAYFRAVTLRAYTKYTVTDEAALRAILDDVRAQQYCASDQQLEIDLRALAVPL
                     LDAYGRTVGALHATTQAGRTTVKQMVSRFLPVLRDAAAEMRPLLV"
BASE COUNT          459 a         1046 c         1045 g          557 t
ORIGIN      
        1 ctccggtttc cgtgctcatg cggccgccgc ggcagcgcgg gcccacgcga agcggaagcg
       61 cgcgctgatg gtcacgtgtt cttcccgcgc tggtacgggc cgagcccggg gcggtatgac
      121 ttctcgtcga ggaactcggt catgcccacg cgctcgcgga tctccttgtc gttgcgcgac
      181 agcgaatcct gcttcgaacg gaggtagtcg cgcgcctgct cgtggctcat cccgtgaacc
      241 gcgcgcatgg cttccttggt atagcgcacg acgcccggat tgagcttcat cagtttcctg
      301 gcgagcgcca cggtctcgtc gcgcagacgc tccttgggca ccgcgaaatt ggcaaggcca
      361 agctcgacgg cgcgcttgcc gtcgaaaggc tcgccggtga ccgcgtaata catggcatgg
      421 cgcggcagca tgagctcggt gaggttccag ctcacgatgc cgcccgggat gatgccccag
      481 ttcacctcgg acaggccgaa cacggcgtcc tcggccgcga tggcgaagtc gaccgcatgc
      541 agctgcgtga aggccgcgcc gaagcagtag ccgttgacca tggcgatggt cggcttcggg
      601 aaggtgcgga ggatatccca gcgccagtgg tggctggcgg cgttggagcg gcggcgctcc
      661 tcgggatcgt tcgtggtttc ccggaaatac gtcttgatgt cctggcccgc gcaccaggat
      721 tcgccggcgc ccgtgagcac caggaccttg gtctcgctgt cggatacgag acgcgtcagc
      781 gcatcctcca tttcgtaatg cagcgccggg ctcatggcgt tgcgcttgtc ggggcggttg
      841 aggatgaccc acgtgatccc gtcttcccgc tcgatcttga cgttctcgta agctttgtcg
      901 gccaccgatt ttctccggat caggatgcga atgtcttgag cacgtgcctg gcgagcgcga
      961 cgcgcatcat ctcgggcgtg ccttccgtga tcatgtggct gcgctggtcg cgccacagcc
     1021 gctcgatcgg caaggcggtc gtcagcccga tgccgccgtg cagctgcagg cacatgtcgg
     1081 cggccttcca tgccatctcg gtgcagaaca gctttgccag ataggcgtcg ttgcggttgt
     1141 cgtcgccgcg gtcgaacttg gcggcggcgc ggtagaccag aagggtcgcg gcttcgagtg
     1201 ccacatacgt gtcggtgagc tgccactgcg tgttctgtcg ctcggacagc ggcttgccga
     1261 aggtgacgcg ctgggtcgcg taggtcgccg cgagctcgag gcagcgtcgc gtcgcgccga
     1321 gcgcgcgcgc accctgcttc acgcgcccga cgccgagcca tccttgcgcg agcttgaacc
     1381 cgccaccttc ctcgccgaca aggtggtcgg ccgcgacgcg cacgtcctca aggacgatct
     1441 cccacggccg ctcgccggtg agcgtctcgt aggatgcgcc caaggtgacg ccgggcgtgt
     1501 ccatgtcgac aatgaagcac gagatgccgc cgcgcgaccc tttggcgcga tcggtcgcgg
     1561 ccatcaggat catgaagtcc gccttgtcgg cgcgcgtgat gaagcgcttg acgccgttga
     1621 tcacgtagtg gtcgccatcg cgcaccgcgg tcgtgcgcat gctgcccggg tcggagccgg
     1681 cgtctggctc ggtctgcgcg aagcaggatt ccttctcgcc gcggatcgtc ggcaggagat
     1741 agcgctcgcg catctcgcct tcgagggcat agaggacagg ccggacctcg gggccgagga
     1801 tgcgcacgcc acgggtcggc agcgcgacgg tgcggcccag ctcggcccag acgagcgcgc
     1861 ggccgacgag gccgagcccc tgcccgccat attcctccgg cacgtcgatc tgccagaggc
     1921 ccagctcctg gcagcgcgcc gtcagctttg tctcgatctc gggcctgagc tccggcccgt
     1981 ccagcgactg gccctcgagc ggaatgagct cgttgtcgac gaagcgtcgc acggtgtcct
     2041 gaagaagccg cagctcttcc gggagctcga aatccatggg tgccgccgcc ctctcgtcca
     2101 tccgatgcgg cgccggagcc gctctggaca aaccgttttc ttgttcgcta tacgaacgta
     2161 tcagccgttg cgcgaacact acgacgggca ctttccgacc gtcaagagag gttctcgcac
     2221 ggcctaggat ggagtggtcg atgcggcgca tcgtggtcga caatgccgtg gtcaccgagg
     2281 acgatccgga cttcgtggcg gctctgtcgc gcgggctcag cgtgatccgc gcattctcgg
     2341 ggcagcagga gaagatgacc ctcgccgagg tggctcgcgt cgtcgggctt tcgcgggcga
     2401 cgacgcgacg ctgcctgctc acgttgcagg cgctcggcta cgtccacatg accggccggg
     2461 agttccaggt cgcgcccaag gtgctgaccc tggcgcaggc ctatctgtcg tcgagcctgc
     2521 tgccgcgcat cgccccgcct ttcctggagc gcatcagcga gaagctcggc gaatcctgct
     2581 ccgtctcggt gctcagcggc aacgaggtgg tctacgtggc gcgctcgaag agccgtcgca
     2641 tgtcggcgat gatgcgcgat gtgggctcgc atcagccggc ctattgcacg tccatgggca
     2701 gggtgttgct ggccgccctg tcggcggccg agctcgacgc ctatttccgc gccgtcacgc
     2761 tgcgcgccta caccaaatat accgtgaccg acgaggccgc cttgcgggcc attctcgacg
     2821 acgtgcgcgc ccagcaatat tgcgcgagcg accagcagct cgagatcgat ctgcgcgcgc
     2881 ttgccgtgcc gctgctcgac gcgtacgggc gcacggtcgg cgcgctacac gcgacgacgc
     2941 aggccggccg caccaccgtc aagcagatgg tctcgcgctt cctgccggtg ctgcgcgacg
     3001 ccgccgccga gatgcggcct ctcctggtct gatcggcacc accctcacct aaagacacgg
     3061 tgcacgcctc ggtcgaggcc atgcgtggcg ccagcgacag cgccgga
//
LOCUS       DATAIQ010001109         1935 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_365405, whole genome shotgun sequence.
ACCESSION   DATAIQ010001109 DATAIQ010000000
VERSION     DATAIQ010001109.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1935)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1935)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1935
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_365405"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            58..864
                     /locus_tag="VHN20_18355"
     CDS             58..864
                     /locus_tag="VHN20_18355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012709454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HEX2727791.1"
                     /translation="MFEQLLALATDPAAWAALVTLIVMEVVLGINNLIFISILTNRLP
                     EHQQTKARRIGIGLALILRLGLLGTIAFIVQLTQPLFTAFGHGFSWRDLILIGGGAFL
                     VWKATTEIHHNVDPDHGPGIFDSDAVVLSFTSAIFQILLLDLVFSLDSIITAVGMTDD
                     VPIMVVAVIVAVTVMLLAADPLANFINRNPSIVMLALGFLLMIGMTLMAEGFGAHVPK
                     GYIYAAMAFSAAVEGLNMLARRARRRHEHRKQQARMTFERDPRHASKAEL"
     gene            complement(971..1921)
                     /gene="gshB"
                     /locus_tag="VHN20_18360"
     CDS             complement(971..1921)
                     /gene="gshB"
                     /locus_tag="VHN20_18360"
                     /EC_number="6.3.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012386035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004363 - glutathione synthase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione synthase"
                     /protein_id="HEX2727792.1"
                     /translation="MPLTVAVQMDPLEGINIAGDSTFALMLSAQDRGHALFHYLAEDL
                     TFDDGRLYAGAHRVSVQPTAGNHFRLGDFTILDLGRDVDVVLMRQDPPFDMAYITATH
                     LLERIHPKTLVVNDPASVRNAPEKLFVTLFPELMPPTLITRDRAEIEAFREEFGEVVM
                     KPLHGHGGAAVLRVTREDPNFGSLFDLFSTSFKEPWVVQRFLPQVKEGDKRIILIDGV
                     AAGAVNRVPAPNDIRSNMVRGGAARPTELTAREREICETIGPELSRRGLLFTGIDVID
                     GNLTEINVTSPTGLRAIRKLGGPDLAVTIWDAIEARVGRG"
BASE COUNT          321 a          639 c          628 g          347 t
ORIGIN      
        1 atcatgctcg aggccgacgc gatcgcctcc ggcaggatgc gtcaggaagg agttgtgatg
       61 ttcgagcagc ttttggcgct ggccaccgat ccggcggcct gggcggcgct tgtgacgctg
      121 atcgtcatgg aggtcgtgct cggcatcaac aacctgatct tcatctccat cctcaccaac
      181 aggctgcccg agcatcagca gacgaaggcc cggcgcatcg gcatcgggct ggcgctgatc
      241 ctgcgcctcg gcctgctcgg cacgatcgcc ttcatcgtgc agctgacgca gccgctgttc
      301 actgccttcg ggcacggctt ctcatggcgc gacctgatcc tgatcggggg tggcgcgttc
      361 ctggtctgga aagcgaccac ggaaattcat cacaacgtcg atcccgacca cggccccggg
      421 atcttcgaca gcgacgccgt cgtattgagc ttcacgtcgg cgatctttca gatcctgctg
      481 ctcgatctcg tgttctcgct cgacagcatc atcacggcgg tcggcatgac cgacgacgtg
      541 ccgatcatgg tcgtcgccgt gatcgtggcg gtcacggtga tgctgctcgc cgccgatccg
      601 ctcgccaact tcatcaaccg caacccatcg atcgtgatgc tggcgctcgg cttcctcttg
      661 atgatcggca tgacgctcat ggcggagggt ttcggcgcgc atgtgccgaa gggctacatc
      721 tacgccgcca tggccttctc ggcggccgtc gaaggcctca acatgctggc ccggcgcgca
      781 cggcgacgcc atgagcacag gaagcagcag gccaggatga ccttcgagag ggatccccgc
      841 catgcgagca aagccgagct ctgacattta tcgagccgca tgaccccggc tcgtgcccgg
      901 gacgggaatt tctcggcgaa gcggcatcca tccggatcaa gcccggggcc ggctttcgcc
      961 ggatcatggt tcagccccgg ccgacgcgcg cctcgattgc gtcccagatc gtcacggcaa
     1021 ggtcggggcc gccgagcttc ctgatggcgc gcaagccggt cggcgaggtt acgttgatct
     1081 cggtgaggtt gccgtcgatc acgtcgatgc ccgtaaacaa gagcccgcgg cggctgagct
     1141 ccggcccgat cgtctcacag atctcgcgct cgcgcgccgt cagctccgtc ggcctggcgg
     1201 cgccgccccg caccatgttc gagcggatgt cgttcggcgc cggcacgcgg ttgaccgcgc
     1261 cggcggcgac gccgtcgatc aggattatgc gcttgtcacc ttccttcacc tgcggcagga
     1321 agcgctgcac gacccacggc tccttgaagc tggtcgagaa caggtcgaac agcgagccga
     1381 aattcgggtc ctcgcgcgtg acgcgcagca ccgcggcgcc gccgtgcccg tgcagcggct
     1441 tcatcaccac ctcgccgaac tcctcgcgga acgcctcgat ctcggccctg tcgcgggtaa
     1501 tcagcgtcgg cggcatcaac tccgggaaca gcgtgacgaa cagcttctcg ggagcgttgc
     1561 ggacgctcgc cgggtcgttg acgacgagcg tcttcggatg gatgcgctcg agcagatgcg
     1621 tcgccgtgat gtaggccatg tcgaacggcg gatcctgccg catcagcacg acgtcgacgt
     1681 cgcggccgag gtcgaggatc gtgaagtcgc cgaggcggaa atgattgcct gcagtcggct
     1741 gaacgctgac gcgatgcgcg ccggcgtaaa ggcggccgtc gtcgaaggtc aggtcttcgg
     1801 ccaggtaatg aaacaaggcg tgcccgcgat cctgggccga cagcatcagc gcgaacgtcg
     1861 aatcgccggc gatgttgatc ccctcgagcg ggtccatctg gaccgcgacg gtaagaggca
     1921 tgggagtctc ctggg
//
LOCUS       DATAIQ010001110         2247 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_227852, whole genome shotgun sequence.
ACCESSION   DATAIQ010001110 DATAIQ010000000
VERSION     DATAIQ010001110.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2247)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2247)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2247
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_227852"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2120)
                     /locus_tag="VHN20_18365"
     CDS             complement(<1..2120)
                     /locus_tag="VHN20_18365"
                     /inference="COORDINATES: protein motif:HMM:NF025141.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VIT and VWA domain-containing protein"
                     /protein_id="HEX2727793.1"
                     /translation="MRRTLALLAMPLLLRGEAGVLATADRRPNEPETLAIAEMEVRIR
                     IDNHHARVETKQIFRNAGGRVIEGVYTFALPARALVADFAVWDDVTRIPGVILERRRA
                     EEIYEIARAQAIDPGLLQQGEHGADEARRSAVFTARIAPIPAYGTKRVELTYDERLPV
                     EDAQIHFALPLRPDMYRAQTAGRLSVTLEITSTQAIRGFTPTAKTYPLRVEEQSAHRV
                     RASFEARNVSLTEDLAVRYAIDSAAADQLSVTAHRATAAEPGFFEASALVGSSRTPAA
                     ASPPRTIIALLDTSLSMQWEKLERAFLALDRLLRGLRPADRFNVLLFNSDARPFTPAP
                     GAATPEAVEKALEFVRGSALRGGTALQAALDLGLRQATGEEPYLVLITDGGATSGPQL
                     RNASIARWYATRLRQSPRTRTFVFAVGDDANLPLLRLLTQGGGLLEWVRSTEPAEFKL
                     NAFLSKIGQRPLEQTSLSTEPRANFDLVYPLEANPYPGSLTAWVGQYRKPGPAALTLR
                     ARRDGAPVEMKAQVTLPAQSLDHPHLPRTWAKARVDALLEKIEREGEDRASIDEIIRL
                     ARKYKFVTPYTSFLAAPRSLLRPRLIRPGDPVLRVRTDPSIASVVALFPFGLVKPLRY
                     LAGEDIWQTRFLAPVDLADGTHRVRLILRDREGRVFRESKTFVIASRPPEVRVRLEKT
                     RVRRGETVRLRVGASETSRTIMAR"
BASE COUNT          367 a          792 c          735 g          353 t
ORIGIN      
        1 atccttgcca tgattgtccg cgatgtttcg gacgcaccca cacgcaaccg gacggtttca
       61 ccgcgccgca cgcgcgtctt ctcgagccgc acccggactt ccggcggtct gctcgcgatg
      121 acaaacgtct tcgactcgcg gaacacgcgg ccctcgcggt cgcgcaggat cagccggacg
      181 cgatgcgttc cgtccgcaag atcgaccgga gcgagaaagc gcgtctgcca gatgtcttcg
      241 cccgcgaggt aacggagcgg cttcaccagt ccgaagggaa acaatgccac taccgacgca
      301 attgacgggt ccgtgcgcac gcggagcacc gggtcgcccg gccggatcag acgtggccgt
      361 agcagcgagc gcggggccgc caggaatgac gtgtagggcg tcacgaactt atacttccgc
      421 gccagccgga tgatctcgtc gatcgacgcg cgatcttcgc cctcgcgctc gatcttctcg
      481 agcagcgcat cgacgcgcgc cttcgcccag gtgcgcggca gatgcggatg gtcgaggctc
      541 tgagccggta aggtgacttg cgccttcatc tccaccggag cgccgtcgcg ccgtgcgcgc
      601 agcgtcagag cggcaggccc gggcttgcga tactggccca cccaggccgt tagcgacccc
      661 ggatacgggt tcgcttcgag cggatacacc aggtcgaaat tggcccgcgg ctcggttgag
      721 agcgaggtct gctcgagagg ccgctgcccg atcttcgaca aaaaggcgtt caacttgaat
      781 tcggcgggct cggtcgatcg cacccattcg agcagcccgc cgccctgtgt caagaggcga
      841 agcagcggca ggttggcgtc gtcaccaacc gcaaagacga acgtccgcgt gcgcggcgac
      901 tgccgcagcc gcgtggcgta ccagcgggcg atcgatgcat tccgtaactg cgggccggac
      961 gtggcgccgc catcggtgat cagcaccagg tagggctcct cccccgtcgc ctgtcgcaga
     1021 ccgaggtcga gggcagcctg cagcgccgtg cctccccgca gcgcactacc gcgaacaaac
     1081 tcgagcgcct tctcgacggc ctcaggcgtc gcggcccccg gcgcgggcgt gaatggacgg
     1141 gcgtccgagt tgaagagcaa cacgttgaac cggtccgccg gacgcagccc gcgtagcaga
     1201 cgatcgagcg ccagaaaagc gcgctccagc ttctcccatt gcatcgacag cgaggtgtcg
     1261 agcagcgcga tgatcgtccg cggcggcgac gccgcagccg gcgtccggct cgagcctacc
     1321 agcgccgacg cctcgaagaa tccgggctcc gccgccgtgg cccggtgagc cgtcacgctg
     1381 agttgatcgg ccgcggctga atcgatggcg taacgcaccg ccagatcctc ggtcaacgac
     1441 acgttccgcg cctcgaagct cgcgcgcacg cgatgcgccg actgctcctc gacgcgcagt
     1501 ggatacgtct tcgccgtcgg cgtgaagccg cggatcgcct gcgtgctggt gatctcgagc
     1561 gtgacgctca ggcgtccggc cgtctgtgcg cgatacatgt ccggccgcag cggaagcgcg
     1621 aagtggatct gggcgtcttc aaccggcagc cgctcgtcat acgtcaactc gacgcgcttg
     1681 gtgccatacg cgggaatggg cgcgattcgg gctgtgaaga cggcgctgcg ccgcgcctcg
     1741 tcggctccgt gctcgccctg ctggagcagt ccgggatcga tcgcctgcgc tcgcgcgatc
     1801 tcgtaaatct cctcggcgcg gcggcgctcc agaatcacgc cgggaattcg ggtgacgtcg
     1861 tcccacaccg cgaagtccgc cactagcgca cgcgcgggca acgcgaacgt gtacacgcct
     1921 tcgatcacgc gtccgcccgc gttccggaag atctgcttgg tttcgacccg cgcatggtgg
     1981 ttgtcgatcc ggatccgcac ctccatctcg gcgatggcca gcgtctcggg ttcgtttggc
     2041 cgccggtcgg cggtcgccag cacacccgcc tccccgcgca gcagcagagg catcgccagc
     2101 agcgccagcg tccgtctcaa agccccgcct cgtcgaatcg gaccaccccg ttgtcggtcc
     2161 ctacatagat gtggctgccc gacgcggcaa tcgccgtgac gttcaaggag ggcaggcccg
     2221 cgaccaccgt tcgccagcgg ccggccg
//
LOCUS       DATAIQ010001111         3318 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_228039, whole genome shotgun sequence.
ACCESSION   DATAIQ010001111 DATAIQ010000000
VERSION     DATAIQ010001111.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3318)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3318)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3318
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_228039"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..953)
                     /locus_tag="VHN20_18370"
     CDS             complement(<1..953)
                     /locus_tag="VHN20_18370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4147 domain-containing protein"
                     /protein_id="HEX2727794.1"
                     /translation="MSGYLIDNQRAALAAIFAAAVDAAHPRQCLVPHLPAPPAQGRLV
                     VLAAGKAGASMAAVAAAFYRERHGTSEANLVGLAVTRHGYAEPAGPIPVIEAGHPVPD
                     QSGVAATERTLALAATAGENDLVLVLLSGGGSANWIAPAGTLTLDEKQGITRALLRSG
                     ANIGEINTVRKHLSRIKGGRLARIAAPAQVLTLAISDVPHDDPAVIASGPTVPDPSTL
                     ADAADVIARRGIPLPASARALLDDPANETPKPGAPLFGRTEFRIVARPADAIAAAARR
                     AEQAGYEPVVLGADLEGEAREVAGDHARMAVDLAAAGRRAA"
     gene            complement(950..1786)
                     /locus_tag="VHN20_18375"
     CDS             complement(950..1786)
                     /locus_tag="VHN20_18375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009758077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEX2727795.1"
                     /translation="MGISPIFVRLAAADVGPFASAFWRVTLALPVLYAWMRFEEAKAP
                     AGTGRPFSRPTVLAGLAFAGDLFFWHLSILNTTVANATFFATTAPIFVVLLVWLVLRR
                     RVSQGTVIGLALCLAGGASLIGQSFQVDPARIVGDVFGIATAAFFGLYFLAVDRAREA
                     SAAARVTFELTCVTAAILFVIALLFDSRVMPRTLEGVAALVAMAWISHAGGQGLLAVA
                     LGRLPAVFSSLVIFLEAVAAAALGWLVLGERLTLLQLLGGAVILLGIWVARPQPGEEV
                     HL"
     gene            1998..2315
                     /locus_tag="VHN20_18380"
     CDS             1998..2315
                     /locus_tag="VHN20_18380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1244 domain-containing protein"
                     /protein_id="HEX2727796.1"
                     /translation="MTDPMQNLDPTTRTELEAAAFRRLVEHLRNRSDVQNIDLMNLAG
                     FCRNCLSNWLKDAADARGAAVTKEDSRTYVYGMPYEEWKARHQTEASAAQVTAFDKNK
                     PAH"
     gene            2516..2782
                     /locus_tag="VHN20_18385"
     CDS             2516..2782
                     /locus_tag="VHN20_18385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2312 domain-containing protein"
                     /protein_id="HEX2727797.1"
                     /translation="MLDKNPIATDTESVAADQLKALIERIERLEEEKAGIAGDIREIY
                     AEAKGNGFDTKAIRKIIALRKKEFAERQEEEAILELYMQALGMA"
     gene            complement(3028..>3318)
                     /locus_tag="VHN20_18390"
     CDS             complement(3028..>3318)
                     /locus_tag="VHN20_18390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012321758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727798.1"
                     /translation="YGYATPADVADQYPRFFWSKVEPFIADALTYLELTVDGRQWIAN
                     LYCNVFEIEHGRRSMGPHDGDVADDGARVGDGSRFQVQKAQRGAKRRGMPQA"
BASE COUNT          581 a         1126 c         1171 g          440 t
ORIGIN      
        1 atcgcggcgc gccggcccgc cgcagcgagg tcgacggcca tgcgggcgtg atcgcccgcg
       61 acctcgcgtg cttcgccttc gaggtcggcg ccgagcacga cgggttcgta ccccgcctgc
      121 tcggcgcggc gcgcggccgc cgcgatggcg tcggcagggc gcgccacgat gcggaactcg
      181 gtgcgcccga acagcggcgc gcccggtttc ggcgtttcgt tggccgggtc gtcgaggagc
      241 gcccgcgcgg aggcgggcag ggggatgccg cgccgggcga tgacgtcagc cgcgtcggcc
      301 agggtcgagg gatcgggcac cgtcgggccg gaggcgatca ccgccgggtc gtcgtgcggg
      361 acgtctgaga tcgccagcgt cagcacctgc gccggggcgg cgatgcgggc gaggcgcccg
      421 cccttgatgc gcgacaggtg tttgcgcacg gtgttgatct cgccgatatt ggcgcccgag
      481 cgcaaaaggg cgcgcgtgat gccctgcttc tcgtcgagcg tgagggtccc ggccggcgcg
      541 atccagttgg ccgagccgcc gcccgacagg agaacgagca cgagatcatt ctcgcccgcc
      601 gtcgccgcga gcgccagcgt gcgctccgtc gccgcgacgc cgctctgatc gggaaccggg
      661 tggccggcct cgatcaccgg gatcggcccg gcaggctcgg cataaccgtg gcgcgtcacc
      721 gcaagcccga cgaggtttgc ttcgctcgtg ccgtggcgct cgcgatagaa ggccgcggcg
      781 acggccgcca tgctggcccc ggccttgccg gccgccagca cgacgagccg cccttgcgcc
      841 gggggcgccg gcagatgcgg gacgagacac tggcggggat gcgccgcgtc gaccgcggcc
      901 gcgaagatcg cggcgagcgc cgcacgctgg ttgtcgatca gatatccgct cacaggtgca
      961 cctcctcgcc cggttgcgga cgggcgaccc agatgccgag caggatcacg gcaccgccga
     1021 gcagctgcag cagcgtcagc cgctcgccga ggacgagcca gccgagcgcc gccgctgcca
     1081 ccgcttcgag aaagatcacc agcgacgaga acacggccgg cagacggccg agggcgaccg
     1141 cgagaagccc ttgcccgccg gcatggctga tccaggccat ggcgacgagc gcggcgacgc
     1201 cctcgagcgt gcgcggcatg acccggctgt cgaacagcaa ggcgattacg aacaggatgg
     1261 cggcggtcac gcaggtcagc tcgaacgtga cgcgggcggc ggcgctcgct tcccgggcgc
     1321 ggtcgaccgc gagaaaatac aggccaaaga aggccgcggt agcaatgccg aatacgtcgc
     1381 cgacgatgcg cgccgggtcg acctgaaagc tctgcccgat cagcgaagct ccgcccgcca
     1441 ggcacagggc gaggccgatc acggtgccct gcgagacccg ccggcgcagc acgagccaca
     1501 ccagcagcac cacgaagatc ggcgcggtgg tggcgaagaa ggtggcattg gcgaccgtcg
     1561 tgttgaggat cgacaggtgc cagaagaaca ggtcgccggc gaaagccagt ccggcgagca
     1621 cggtcggccg gctgaacggg cggcccgtgc cggcaggcgc tttcgcctcc tcgaagcgca
     1681 tccaggcata gagcaccggc agcgcgagcg tgacgcgcca gaaggcgctg gcgaatggcc
     1741 cgacatcggc ggcggcgagg cgcacgaaga tcggcgaaat acccatggcc accgccccca
     1801 cgcacagggc ggtgaaggcc ccggcaaagc cgggctcgac gcggacgctg gtctccgagg
     1861 acattttcgg gatgtagcag ggttcaggcg agggccgaac cccgaagttg cggcggcgtc
     1921 acgcatcttc cctttccacg cgcaccgcca tatttgccgg gtcagcccaa gggaaacagt
     1981 cgaatgggag acagacgatg acggacccga tgcagaatct ggacccgacc acccggacgg
     2041 agctcgaggc ggcggccttc cgccggctcg tcgagcacct gcgcaaccgc agcgacgtgc
     2101 agaacatcga cctgatgaac ctggccggct tctgccgcaa ctgcctgtcc aactggctca
     2161 aggacgcggc cgacgcgcgc ggcgccgccg tcaccaagga ggacagccgc acctacgtct
     2221 acggcatgcc gtacgaggag tggaaggcgc gccatcagac cgaggccagt gccgcgcagg
     2281 taacggcttt cgataaaaac aagcctgcgc attagcgccg ggttgtggca tcggcgcccc
     2341 gcccacattc aacgcattga tttttcatga tgtttgcggc gccgagggga tgccgcaatc
     2401 atccccgaag ttaacaggac aggcttggcc gcgcatgcgc cgccttgacg ttcgcggcgc
     2461 gtgagggcac ccccatcggc tctcaaaatc gtccggagaa tcgcggggca aacgcatgtt
     2521 ggacaagaac ccgatcgcca ccgatactga atcggtcgcc gccgatcagc tcaaggccct
     2581 catcgagcgc atcgagcgtc tcgaggagga gaaggccggc atcgccggcg acatccgcga
     2641 gatctacgcc gaggccaagg gcaacggctt cgacaccaag gccatccgca agatcatcgc
     2701 cttgcgcaag aaggaatttg ccgagcgcca ggaggaggag gcgatcctcg aactctacat
     2761 gcaggcgctc gggatggcgt agcccgcgcc gtctgcgtca cagggcgtgg tgcaacctcc
     2821 gactgatgaa gcggccgccc gcgagagcag ggcggccgag ctggcaatcc caaagaatcg
     2881 catcgcgggc gcgataagcg cgctcggcct agtgggtgtc gctctcgctc gcggccgttc
     2941 ctcgcggatg tcatcgccgc gctcggacag tcactcacgt gaggaacggg gaagactgct
     3001 cagcgggtcg cgctgccgtg catcccctca tgcttgcggc atgccccgcc gcttggcgcc
     3061 acgttgagcc ttctgcacct ggaagcgcga gccgtcgccg acccttgcgc cgtcgtcagc
     3121 gacgtcgccg tcatgcggcc ccatgctgcg ccgtccgtgc tcgatctcga agacgttgca
     3181 atagaggttg gcgatccact gccggccgtc gacggtgagc tcgaggtagg tcagcgcgtc
     3241 ggcgatgaac ggctcgacct tgctccagaa gaaacgcgga tattgatcgg cgacgtcggc
     3301 gggggtcgca tagccgta
//
LOCUS       DATAIQ010001112         2328 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_271961, whole genome shotgun sequence.
ACCESSION   DATAIQ010001112 DATAIQ010000000
VERSION     DATAIQ010001112.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2328)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2328)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2328
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_271961"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(88..480)
                     /locus_tag="VHN20_18395"
     CDS             complement(88..480)
                     /locus_tag="VHN20_18395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006728710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HEX2727799.1"
                     /translation="MWAVSFEDEFAKEFKQLDAEVQDAILAYAKALASEGPRLGRPWA
                     DTLKGSKHANMKELRPTVNKVEWRVAFAFDPDRRAILLAAVAKGGTKTAYKRLIATAD
                     RRFGAHMEAIKAKSSGKAGRPAKAKRRK"
     gene            1211..1963
                     /locus_tag="VHN20_18400"
     CDS             1211..1963
                     /locus_tag="VHN20_18400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020091265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HEX2727800.1"
                     /translation="MHRLPLAFAALLLSLAPAAADAVVGRASVVDGDTLDIRGTRIRL
                     HGVDAPESAQTCRDANGQAWRCGQQAALALADHIGSANVSCEQKDVDRYKRVVAVCSA
                     GGEDLNAWLVQHGYALAYRQYAKDYVDEEDSARRARRGVWAGAFTPPWDWRKSKREGG
                     APRDGSAAGEGGTAAGDDRARPHAAAPDKSASRGKKDCRIKGNISARGERIFHEPGSR
                     AYDKTQLDEASGERWFCSAADAIAAGWRAPRG"
     gene            complement(2088..>2328)
                     /locus_tag="VHN20_18405"
     CDS             complement(2088..>2328)
                     /locus_tag="VHN20_18405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727801.1"
                     /translation="FHAHRPFLQLTPVHRAHYADALLNDFVVHEGFAGMTADDWQAYG
                     RTVVAPNADPVERRQGAYAAASRKRRAAEEKAGNP"
BASE COUNT          367 a          873 c          750 g          338 t
ORIGIN      
        1 ggacgatcgt gcgggcgaga gcgtcgacct tggcacggcg tcgcggcgac aggtccttca
       61 tcatcgagtc gagcgaaaca ggcatggtca tttccttctc ttcgccttgg cgggcctgcc
      121 ggccttcccc gacgacttcg ccttgatcgc ttccatgtgc gcgccaaagc gcctgtcggc
      181 tgttgcaatc agcctcttgt acgccgtctt cgtgccgccc ttggccacag ccgccagcag
      241 gatggcccga cggtccggat cgaaagcgaa tgcgacgcgc cactcgacct tgttcaccgt
      301 cggccgcagt tccttcatgt tggcgtgctt cgaccctttc agcgtgtccg cccagggccg
      361 accgagccgc ggcccttccg acgcgagcgc tttggcgtag gcgagaatgg cgtcctggac
      421 ctcggcatca agctgcttga actccttggc gaattcgtcc tcgaaactca ccgcccacat
      481 agcccaccat aagttacgac tcatataatc gcaagcttat aatcgacggc gcgcggaagc
      541 gcgccgcgag cctacagcgc tctcggccgt cccgccgggt taatcagagt aaaccatggc
      601 gccggtcgcc gcagggcggt cgttccccgc ttccccacag cggctgctgc cgcgccagtc
      661 ggcggcccac cagattccag caaaatactg gagccggacg ggcagggggc cgcggcggcg
      721 gtccaccaga ttcccagcaa aatactgagc cggccctccc gttaccctgt catcaccggc
      781 ctcgtgccgg tgatcccgat cgctgaggcg ccgcccgtcc gatcgggatg gccgggccaa
      841 gcccggccat gacaacgacg gcgcgcggtc caccagattc ccagcaaaat actgagcccg
      901 gcccccttca ccctgtcatc accggcctgg tgccggtgat cccgatcggt gcggcgccgc
      961 ctttccgatc gggatggccg tacccggatc agcccttcgg gctgtccggg cactgcaggg
     1021 acaccaagcc cggccatgac aacgacgggg gcgggcggcc cactagattc tcagcaaaat
     1081 actgagcccg ccccctggca ccggcggccc accgccgccc cggcgccccc cgcgggcggc
     1141 cgttaccggt tccttaaccc cgcaaaacca agactcggcg cgtcccgcca ccccaccccg
     1201 agtcttcgcc atgcatcgcc tgccgctcgc tttcgccgcg ctcctcctgt ccctcgcgcc
     1261 ggcggcggcc gacgcggtcg tcgggcgggc cagcgtcgtc gacggcgaca cgctcgacat
     1321 ccgcggcacg cgcatccgcc tgcacggggt cgacgcgccg gaaagcgcgc agacctgccg
     1381 cgacgccaac ggccaggcct ggcgctgcgg ccagcaggcc gcgctggcgc tggccgacca
     1441 catcggcagc gccaatgtgt cgtgcgagca gaaggacgtc gaccgctaca agcgcgtcgt
     1501 cgcggtatgc tcggccggcg gcgaggacct caatgcgtgg ctcgtgcagc acggctacgc
     1561 gctcgcctac cgccaatacg cgaaggacta tgtcgacgag gaggattctg cccggcgcgc
     1621 ccggcgcggc gtctgggccg gcgccttcac gccgccgtgg gactggcgca agagcaagcg
     1681 cgagggcggc gcgccccgcg acggtagcgc cgccggcgaa ggcggcacgg ccgccggcga
     1741 cgatcgcgcc cggccgcacg ctgcggcccc cgacaagagc gcgtcgcgtg gcaaaaagga
     1801 ttgccgcatc aagggtaaca tcagcgccag gggcgagcgt atcttccacg agcccggcag
     1861 ccgcgcctac gacaagacgc agctcgacga ggcctccggc gagcgctggt tctgctcggc
     1921 cgccgacgcc atcgccgccg gctggcgcgc cccgcgcggg taagccgcga tccaatacac
     1981 caatgtcatt ccggggcgac gccaacgggt ccggccttcg gccggcccga tgataaactc
     2041 cgcgtcgaac ccggaaccca cgaccgggcg cgacggcggt cacccgatca ggggtttccc
     2101 gccttctcct ccgcggcgcg gcgcttgcgt gaagcggccg cataggcgcc ctgccgccgc
     2161 tccaccggat cggcgttcgg cgccaccacc gtgcggccat aggcctgcca gtcgtcggcg
     2221 gtcatgccgg cgaaaccttc gtgcacgacg aaatcgttga gcagcgcgtc ggcatagtgc
     2281 gcccggtgga ccggcgtcag ctgcaggaat ggccggtgcg cgtggaag
//
LOCUS       DATAIQ010001113         1723 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_77566, whole genome shotgun sequence.
ACCESSION   DATAIQ010001113 DATAIQ010000000
VERSION     DATAIQ010001113.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1723)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1723)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1723
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_77566"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..414
                     /locus_tag="VHN20_18410"
     CDS             <1..414
                     /locus_tag="VHN20_18410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX2727802.1"
                     /translation="GQSVRKVLERIAKEGRKYGVSLGLITQRPSDLAEGVLSQCGTII
                     AMRLNNERDQHFVKSAMPEGARGFLDAIPALRNRECIVCGEGVAIPIRVRFDDLEPEK
                     RPASSDPSFAELWRQTGDEPGIISRTIKRWRGHGR"
     gene            465..836
                     /locus_tag="VHN20_18415"
     CDS             465..836
                     /locus_tag="VHN20_18415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727803.1"
                     /translation="MPKPAGLPQSGQDRRHGIYSRDAAPLAFGDPHSHIPPMDEQRAA
                     AKAQFLRMIAWIAGIGVLMAIAAIGFLAATGELHVHMVIATIGGVFFSILLGSGLFAA
                     SFFSDKSGHDQSVSDATRRKD"
     gene            complement(841..>1723)
                     /locus_tag="VHN20_18420"
     CDS             complement(841..>1723)
                     /locus_tag="VHN20_18420"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEX2727804.1"
                     /translation="RAIEQIALRAAIDSRMVIVRSGGTLVARRIALAVDKRPVRLRGI
                     AGGGIYWALRNAGASTATAAEYLKALASEIDVGEIGPQDRFDLVMANRRTADGRGQTG
                     MLLYAAIDRQMGSDLQLVRWTAGGKPVWVNAATIGDQRRDDNAMAWPVDAPITSRFGL
                     RVHPILRFARMHRGIDFGARWGTPIHAAADGQVTRAGWAGGYGRQVRIDHGAGMATSY
                     SHMSSLAVAPGSFIQRGQLIGYVGSSGLSTGPHLHYEVYRGGVAVDPLSVRFVTSRPI
                     DPATVAAIKARVKELAP"
BASE COUNT          290 a          624 c          558 g          251 t
ORIGIN      
        1 ggccagtcgg tcaggaaggt gctcgagcgg atagccaagg agggccgcaa atacggcgtc
       61 agcctcggcc tcatcaccca gcgtccctcc gacctcgccg agggcgtgct ctcgcaatgc
      121 ggcacgatca tcgcgatgcg cctcaacaac gagcgcgacc agcatttcgt caagtcggcc
      181 atgcccgagg gcgcgcgcgg cttcctcgac gccatccccg cgctgaggaa ccgcgagtgc
      241 atcgtctgcg gcgagggcgt cgcaatccca atccgagtcc gcttcgacga cctcgagccc
      301 gagaagcgcc cggcctcctc cgacccgagc ttcgccgaac tgtggcgcca gaccggcgac
      361 gagcccggca tcatcagccg caccatcaaa aggtggcggg ggcacggccg ctgaggcacc
      421 gagcgtaagg gacgcggagc gcagcgagcg accttacgcg agagatgccg aagccggccg
      481 gcctgccgca aagcggacag gaccgacgtc acgggattta ctcccgtgac gcagccccgc
      541 tagcattcgg cgacccccat tcccacattc cccctatgga cgaacagcgc gccgccgcca
      601 aagcccagtt cctgcggatg atcgcctgga tcgccggcat cggggtgctg atggccatcg
      661 ccgccatcgg ctttctcgcg gcgaccggcg agcttcacgt gcacatggtc attgcgacga
      721 tcggcggcgt gttcttctcg atcctgctgg gctccggcct gttcgccgcg tcgttcttca
      781 gcgacaagag cggccacgac cagtcggtgt cggacgcgac tcgccgcaag gactgactca
      841 tcagggcgcc aattccttca cccgcgcctt gatcgccgcc accgtggccg ggtcgatcgg
      901 gcgcgaagtg acgaagcgca cgctgagcgg atcgaccgcg acgccgccgc gatagacctc
      961 gtaatggagg tgcgggccgg tcgaaaggcc gctcgatccg acatagccga tcagctggcc
     1021 acgctggatg aaggagccgg gcgcgaccgc caggctcgac atgtggctgt agctcgtcgc
     1081 cattcccgcg ccatgatcga tccggacctg ccgcccgtaa ccgcccgccc agccggcgcg
     1141 ggtgacctgg ccgtcggccg cggcatggat cggcgtgccc cagcgggcgc cgaaatcgat
     1201 tccgcgatgc atgcgggcga agcgcaggat cgggtggacc cgaagcccga agcgagaggt
     1261 aatcggcgcg tcgaccggcc acgccatggc gttgtcgtcg cggcgctggt cgccgatcgt
     1321 cgcggcattg acccacaccg gcttgccgcc ggcggtccag cgcacaagct gaaggtcgct
     1381 gcccatctgc cggtcgatgg ccgcataaag cagcattccc gtctggccac ggccgtcggc
     1441 ggtgcggcga ttggccatga ccaggtcgaa gcggtcctgc ggcccgatct cgccgacgtc
     1501 gatctcgctc gccagtgctt tcagatattc cgcagcggtg gcggtcgagg cgcctgcgtt
     1561 gcgaagcgcc caatagatgc ccccgccggc gatcccacgc agccgcaccg gccgcttgtc
     1621 gaccgccagc gcaatgcgcc ttgcgaccag cgtcccccca gaccgcacaa tgaccatccg
     1681 cgaatcgatc gctgcacgca gcgcgatctg ctcgatcgcc cgc
//
LOCUS       DATAIQ010001114         3954 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_228168, whole genome shotgun sequence.
ACCESSION   DATAIQ010001114 DATAIQ010000000
VERSION     DATAIQ010001114.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3954)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3954)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3954
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_228168"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..680
                     /locus_tag="VHN20_18425"
     CDS             <1..680
                     /locus_tag="VHN20_18425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HEX2727805.1"
                     /translation="VPVQTCCGQPAYNSGDRGTTRDLAMRMIEAFRGYDYVVAPSGSC
                     AGMIRTHYPELFADDPNWLPKANALGARTWELTSFLVDVLGVTEVNAAFDGVVTYHDS
                     CSGLRELGVRAQPRKLLASVDGLALVELGDSDVCCGFGGTFAVKYADISNAIVAEKAR
                     NIAESGAPTVLAGDLGCLMNIAGKLSRDGRPIAVRHVAEVLAGMADGPPIGAPRPRGA
                     QDEPPNP"
     gene            754..978
                     /locus_tag="VHN20_18430"
     CDS             754..978
                     /locus_tag="VHN20_18430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015934331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727806.1"
                     /translation="MGSATKGKTPGATALDYVKTDQKIEAGLAAKEAAAKAGKAAQPG
                     GADPTHDSPKRHGDKLEHARDAAAGRGKDK"
     gene            1258..1752
                     /locus_tag="VHN20_18435"
     CDS             1258..1752
                     /locus_tag="VHN20_18435"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEX2727807.1"
                     /translation="MLKALVPVDGSNNSMCAVRHVIKLVQDREPLEIHLLNVQPPFHG
                     DVTSFVAKEDVEGFHLDEAHKALHRACELLNEAAVHYTKHVYVGHAAEVIAEVAKELG
                     CDKVIMGTHGYGTVRQLMMGSISHKAIHLMDPGIPVTLVKDGYAAGPARRPAAIATAH
                     ADAR"
     gene            1845..>3954
                     /locus_tag="VHN20_18440"
     CDS             1845..>3954
                     /locus_tag="VHN20_18440"
                     /inference="COORDINATES: protein motif:HMM:TIGR01494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HEX2727808.1"
                     /translation="MSLQHAQTKAPASPAIAAAPDRAPAPVSATTAHRQPANAVVATL
                     GSNAGQGLSRDEARRRLERYGPNQLKSAPETPWWRRLAEQFENFLVIILLVATVISVL
                     EWLLQDPRESALPYEAIVILAIVLLNALLGYFQEARAERSVRALMALAAPESTVIRDG
                     ERQRIPASDIVPGDIILVDAGDKIPADARIVEEANLHTDEAPLTGESMPVAKNARPID
                     ADVGIGDRRNMLFSSTVATYGRGKAIVVATAMETEVGRIAGLLEAAEKEPTPLQQELD
                     RTGKRLSVIMLGICAVVFATGLFTSASWSLNIILSLFLFAVALAVAAIPEALPAIVTV
                     GLSLGVRRMAAANAIVRKLPAVETLGAATVICSDKTGTLTRNEMTVRAVFTAGALVEV
                     GGSGYIPEGEFTVDGAPLADRPHLREAVETTLRAAALVNDAVLASSEGRWRVQGDPTE
                     GALVVAARKLGVTESELGRFPRIAEIPFTSERKRHTTVHRDGGDDSGLRAFVKGAPEI
                     LLGRCGFIWEDGKAVPLGEARRAELVRHNERLAAQALRTLAIATREVPPGALGLDSRT
                     LAEPRDDIEVPETIEADLVLLGFVGMIDPPRAEAKAAVAVAKRAHIRTVMITGDHPAT
                     AEAIARELDIFEPGARTVTGAELRNMDDAALDAIVEDVRVFARVDPEHKLRIVSALQK
                     KNHIVAMTGDGINDAPALKTA"
BASE COUNT          648 a         1424 c         1332 g          550 t
ORIGIN      
        1 aggtcccggt ccagacctgc tgcgggcagc ccgcctacaa ttccggcgac cgcggcacga
       61 cgcgcgatct ggccatgcgc atgatcgagg cgttccgcgg ctacgactac gtcgtcgccc
      121 cgtccgggtc ctgcgccggc atgatccgca cgcattatcc cgaactcttc gccgacgacc
      181 ccaactggct gccgaaggcc aacgcgctcg gcgcgagaac ctgggagctg accagcttcc
      241 tggtcgacgt gctcggcgtc accgaggtga acgccgcctt cgacggcgtg gtcacctatc
      301 atgacagctg ctcggggctg cgcgagctcg gcgtcagggc gcagccgcgc aagctgctcg
      361 cgagcgtcga cggtctcgcg ctcgttgagc tgggcgacag cgacgtgtgc tgcggtttcg
      421 gcggcacctt tgccgtcaaa tacgccgaca tctccaatgc cattgtcgcc gagaaggccc
      481 ggaacatcgc cgagagcgga gcgccgaccg ttctggccgg cgatcttggt tgtctcatga
      541 acatcgccgg caagctctcg cgcgacggtc ggccgatcgc cgtgcgccat gtcgccgagg
      601 tgctcgccgg catggccgac ggaccgccaa tcggcgcgcc ccgcccgagg ggcgcgcagg
      661 acgagccgcc gaatccatga gcggccggcg gaccgccgtg caaccgggcg ccgggctgca
      721 tcgttagctt gtcgtcagca ggagggcgcg gctatgggca gcgcaacgaa gggcaagact
      781 ccgggcgcca cggccctgga ttacgtcaag accgaccaga agatcgaggc aggcctggcc
      841 gcgaaggagg ccgccgccaa ggccgggaag gccgcgcagc cgggcggcgc cgatccgacg
      901 cacgacagcc cgaagcgcca cggcgacaag ctcgagcatg cgcgcgacgc cgccgccgga
      961 cgcggcaagg acaaatagcg ccgctttctc cacggaccgg caagccgcac atcgtcgcct
     1021 cgaggcggct tgctgacgcg gaaaggctcg gctaacgtca gcctgcttac ccgcaaaggg
     1081 gagtagccct actgcacgtt cgtcaggccg ggaccttggt ccccgggcgt gcgggcgacg
     1141 cgtcaggcgt cgcagcaaga cctttgtcaa gacggtaagt cgtaaggact gccggagacc
     1201 ggttttgcct ggcctccggg gatcgagacg actttggatc gattgacgga ggttgccatg
     1261 ctcaaggcat tggtgcccgt tgacggctcg aacaattcca tgtgcgccgt ccggcacgtc
     1321 atcaagctcg ttcaggaccg cgagcctctc gagatccacc tgctcaatgt gcagccgccg
     1381 ttccacggcg acgtcacgag cttcgtggcc aaggaggacg tggagggctt tcacctcgac
     1441 gaagcccaca aggcgctgca ccgcgcctgt gagctcctga acgaggcggc cgttcattac
     1501 accaagcacg tctatgtcgg gcacgcggcc gaggtcatcg ccgaggtcgc caaggagctc
     1561 ggctgcgaca aggtgatcat gggcacgcat ggctacggca ccgtcaggca gctgatgatg
     1621 ggctcgatca gccacaaggc gatccacctg atggacccgg gcatcccggt caccctcgtc
     1681 aaggacggat acgccgccgg gcccgcccgc cgccccgccg ccatcgcgac cgcgcacgcg
     1741 gacgcgcgat gacgatgccc gcacggcggg accgccaggc ctgcgggcgc ggcggtccgg
     1801 cgccgtgcgc ctgtccactc ccctgatccg atgaggcccg tgtcatgagc cttcagcacg
     1861 cgcagaccaa agcccccgca tctcctgcca ttgccgccgc gccggacagg gcgcccgcgc
     1921 ctgtgtcggc cacgaccgcg caccgccaac ccgccaacgc cgtcgtcgcg acgctcgggt
     1981 cgaatgcggg gcagggcctc agccgcgacg aggcgcggcg acgcctcgag cgctacggac
     2041 ccaaccagct gaagagcgcg cctgaaacgc cgtggtggcg gcggctcgcc gagcagttcg
     2101 agaacttcct ggtcatcatt ctgctggtcg ccaccgtgat ctcggtcctc gagtggctgc
     2161 tgcaggaccc gcgcgagagc gccctcccct atgaagcgat cgtgatcctc gcgatcgtgc
     2221 tgctcaacgc cctgctcggc tatttccagg aggcacgcgc cgaacggtcg gtgcgcgcac
     2281 tgatggcgct tgcggcaccc gagtcgaccg tcatccgcga cggcgagcgc caacgcattc
     2341 cggcgagcga catcgttccc ggcgacatca tcctggtcga cgcgggcgac aagattccgg
     2401 ccgatgcgcg catcgtcgag gaggccaatc tccataccga cgaggcgccc ctgaccggcg
     2461 aaagcatgcc ggtcgccaag aacgcccgcc cgatcgacgc cgacgtcggc atcggcgacc
     2521 gccgcaacat gctcttctcc agcaccgtcg ccacctacgg ccgcggcaag gcgatcgtcg
     2581 tcgcgaccgc gatggagacc gaggtcggcc gcatcgctgg cctgcttgaa gccgccgaaa
     2641 aggaaccgac gccgcttcag caggagctcg accgcaccgg caagcgcctg agcgtgatca
     2701 tgctcggcat ctgcgcggtc gtattcgcca ccggcctgtt cacgagcgcg agctggagcc
     2761 tgaacatcat cctgagcctg ttcctgttcg cggtggcgct ggccgtcgcg gcgatcccgg
     2821 aggcgctgcc tgccatcgtc accgtcgggc tgagcctcgg cgtgcgccgc atggcggccg
     2881 ccaacgcgat cgtgcgcaag ctgccggcgg tggagaccct gggcgccgcc accgtgatct
     2941 gttccgacaa gaccggcacg ctgacccgca acgagatgac cgtacgcgcc gtcttcacgg
     3001 ccggcgcgct cgtcgaggtc ggcggcagcg gctacatccc ggagggcgag ttcacggtcg
     3061 acggcgcgcc gctcgccgac aggccgcatc tgcgcgaggc cgtcgagacg acgttgcgcg
     3121 cggccgcgct cgtcaacgac gcggtgctcg cgagcagcga aggccgctgg cgcgtgcagg
     3181 gcgacccgac cgaaggcgcc ctggtggtcg cggcccgcaa gctcggcgtc accgagtcgg
     3241 agctcgggcg ttttccacgc atcgccgaga tcccgttcac gtcggaacgc aagcgccaca
     3301 cgaccgtgca tcgcgatggc ggtgacgaca gcgggctgcg tgccttcgtc aagggcgccc
     3361 cggagatcct gctcggcagg tgcgggttca tctgggaaga cggcaaggcc gtgccgctcg
     3421 gcgaggcccg ccgcgccgag ctcgtccggc acaacgagcg gctcgccgcc caggcgctcc
     3481 gcacccttgc catcgccacg cgcgaggtgc cgccgggcgc gctcgggctc gattcccgca
     3541 ccctggcgga gccgcgcgac gacatcgagg tgccggagac catcgaggcg gatctcgttc
     3601 tcctcggctt cgtcggcatg atcgacccgc cgcgcgcgga ggcgaaggcc gccgtcgcgg
     3661 tcgccaagcg ggcgcatatc cgcaccgtca tgatcaccgg cgaccacccc gccacggcgg
     3721 aggcgatcgc ccgcgagctc gacatcttcg agccgggcgc gcgcaccgtg actggcgccg
     3781 agctgcgcaa catggacgac gccgcgctcg acgccatcgt cgaggacgtg cgcgtgttcg
     3841 cgcgcgtcga tcccgagcac aagctgcgca tcgtcagcgc gttgcagaag aagaaccaca
     3901 tcgtcgcgat gaccggcgac ggcatcaacg acgcgccggc gctcaagacc gcca
//
LOCUS       DATAIQ010001115         1970 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_272261, whole genome shotgun sequence.
ACCESSION   DATAIQ010001115 DATAIQ010000000
VERSION     DATAIQ010001115.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1970)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1970)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1970
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_272261"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..223)
                     /locus_tag="VHN20_18445"
     CDS             complement(<1..223)
                     /locus_tag="VHN20_18445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727809.1"
                     /translation="MTSFTRKALTTSALTTVAGFAAFVAAVLFVAGTIVGQQGPVAPS
                     TTTELLREFHDESGTLLIGAILASLGLMLT"
     gene            complement(422..901)
                     /locus_tag="VHN20_18450"
     CDS             complement(422..901)
                     /locus_tag="VHN20_18450"
                     /inference="COORDINATES: protein motif:HMM:NF018095.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HEX2727810.1"
                     /translation="MRRLVAALVIGVSLAVPASAQDKKVPYWASIASGEAMARAGPGR
                     TYPGLWLYKRRDLPVRVLKVYDNWRLIEDPNGDKGWMLVSLMSGDRTAIVKPGEPRPI
                     REKPAGSSRVAYLAESGVIGKVGRCDGQWCRFAVGRKRGWIAQGDLYGIGVGEAFED"
     gene            complement(901..>1970)
                     /locus_tag="VHN20_18455"
     CDS             complement(901..>1970)
                     /locus_tag="VHN20_18455"
                     /inference="COORDINATES: protein motif:HMM:NF015047.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018580 - nitronate monooxygenase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HEX2727811.1"
                     /translation="RILQGVLERTKGMVAGVTCGAGMPYKLSEIAAHHGVTYLPIISS
                     GRAFRALWKRAYHKAAEWLSAVVYEDPWLAGGHNGLSNAEDPRKPQDPYPRVKELREV
                     MREGGISDEVPIVMAGGVWRLDEWNDWIDNPELGQIMFQFGTRPLLTQESPIPPEWKA
                     RLMTLEEGDVLLHRFSPTGFYSSAVRNPFLRNLEARSERQIAFTKEPVGDHAHVLDVG
                     VGNRKNFYVTRGDLQHAREWHAAGFTEAMKTPDDTLVFVTPDEMRHIRKDQADCMGCL
                     SQCAFSSWADNEKNSTGRLADPRSFCIQKTLQDIAHGGPVDQNLMFAGHAAFRFKTDP
                     FYSNGFVPTVKQLVDRILTGA"
BASE COUNT          329 a          662 c          650 g          329 t
ORIGIN      
        1 ccgtgagcat caggccgagc gaggcgagga tggcgccgat cagcagcgtc ccgctctcgt
       61 cgtggaactc gcgaagcagc tcggtcgtcg tgctgggcgc gacagggccc tgctgaccca
      121 cgatcgtgcc ggccacgaac agcaccgcgg cgacgaacgc ggcgaagccc gcgaccgtcg
      181 tcaacgcgct ggtcgtcagc gccttgcgag tgaaactagt catgttgtct gctccccatc
      241 ttttaaacgc aatggaaccg ccttccgagc aaaaggcagt tgcggcattg gtaccgtcgc
      301 aaagcgtgaa agggaagccg ggttgcatcc gaagccgggg ggcccatgat ttaacgcaga
      361 ctgttgcaaa aatgacgcgg aagctcgggg caggcagcat ggcggacgct tcgcccgagg
      421 atcagtcctc gaaggcctcg ccgacgccga ttccgtagag atcgccctgg gcgatccagc
      481 cgcgcttgcg gcccaccgcg aagcggcacc actggccgtc gcaccggccg accttgccga
      541 tcaccccgct ctcggcgaga tacgccacgc ggctggaccc tgccggcttc tcgcggatcg
      601 ggcgcggttc gcccggcttg acgatcgcgg tgcggtcgcc gctcatcagg ctgaccagca
      661 tccagccctt gtcgccattg gggtcctcga tcagccgcca gttgtcgtag accttgagca
      721 cccgcaccgg cagatcgcgg cgcttgtaga gccaaagtcc cgggtaggtc cggccgggcc
      781 cggcgcgggc catcgcctcg ccgctggcga tagacgccca gtacggcacc ttcttgtcct
      841 gcgccgatgc cgggacggcg agcgatacgc cgatcaccag cgctgccacc agcctgcgca
      901 tcacgcgccc gtcaggatcc ggtcgaccag ctgcttgacc gtcggcacga agccgttcga
      961 gtaaaacggg tcggtcttga agcggaacgc ggcgtggccg gcgaacatga ggttctggtc
     1021 gaccgggccg ccgtgggcga tgtcctggag cgtcttctgg atgcagaagg aacgcgggtc
     1081 cgcaagccgg ccggtcgaat tcttctcatt gtccgcccag gacgagaagg cgcattgcga
     1141 caggcagccc atgcagtcgg cctggtcctt gcggatgtgg cgcatctcgt cgggcgtgac
     1201 gaacaccagc gtgtcgtcgg gcgtcttcat cgcctcggtg aagccggcgg catgccattc
     1261 gcgcgcgtgc tggaggtcgc cgcgggtgac gtagaaattc ttgcggttgc cgacaccgac
     1321 gtcgagcaca tgggcgtggt cgccgaccgg ctccttggtg aaggcgatct ggcgctcgct
     1381 tcgcgcctcg agattcctca ggaagggatt gcgcaccgcc gacgaataga agccggtcgg
     1441 cgagaagcgg tggaggagta cgtcaccctc ctcgagcgtc atcagccgcg ccttccactc
     1501 gggcgggatc gggctttcct gggtcagcag cggtcgggtg ccgaactgga acatgatctg
     1561 cccgagctcg ggattgtcga tccagtcgtt ccactcgtcg agccgccaca cgccgccggc
     1621 catgacgatc ggcacctcgt cggaaatccc gccctcgcgc atcacctcgc gcaattcctt
     1681 gacccgcgga taggggtcct gcggcttgcg cggatcctcg gcgttgctca ggccattatg
     1741 accgccggcc agccacggat cctcatagac caccgcgcta agccactcgg cggccttgtg
     1801 ataggcccgc ttccacagcg cacgaaaggc ccggcccgac gagatgatcg gcaagtaggt
     1861 gacgccgtgg tgcgccgcga tctcgctgag cttgtagggc atcccggcgc cgcaggtgac
     1921 gccggcgacc atgcccttag tccgttccag cacgccctgc aggatgcgtt
//
LOCUS       DATAIQ010001116         1775 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_228667, whole genome shotgun sequence.
ACCESSION   DATAIQ010001116 DATAIQ010000000
VERSION     DATAIQ010001116.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1775)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1775)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1775
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_228667"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            305..1072
                     /locus_tag="VHN20_18460"
     CDS             305..1072
                     /locus_tag="VHN20_18460"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF025217.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX2727812.1"
                     /translation="MSAHGTPGFQDHFSSRAGEYARFRPRYPPALFDLVAALPERRRL
                     ALDVGTGNGQAAVALAGHFEKVIGIDGSAAQLERAQPHPRVEYRLGRAEETGMPDGSV
                     DLVTVAQAAHWFDLDRFYAEARRVAAKGGALALWSYDDPVIVGDAASDALLQEFNLGT
                     MGPWWPRDRAKVGLGQAQLPFPFDELGVPTMTLSQDWTRAELAGYARSWSSVSRYVAE
                     RGEDPVIDFERALSRTWPDAQQRKRIEWPLAVRAGRL"
     gene            complement(1371..>1775)
                     /locus_tag="VHN20_18465"
     CDS             complement(1371..>1775)
                     /locus_tag="VHN20_18465"
                     /inference="COORDINATES: protein motif:HMM:NF012503.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016830 - carbon-carbon lyase activity
                     [Evidence IEA];
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019752 - carboxylic acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-dependent decarboxylase"
                     /protein_id="HEX2727813.1"
                     /translation="YGVQLGRRFRALKLWMVIRAFGAEGLSSRIAAHCALARDFAGWV
                     RGEKGWEVVAPVPFSTVCFRCAPTGVSDADADALNASILERVNASGRAFLSHTKLGGR
                     YVLRLAIGNIRTERRHVAAAWDELRTAAARMR"
BASE COUNT          274 a          619 c          606 g          276 t
ORIGIN      
        1 gacgacgtcg gtgtcgatgg cgtcggtgat cgtggcgatg atcttctccg ccggcgtcgg
       61 catcctcttc ggcgtctggc cggcgcgtcg cgcggcggcg ctggatccga tcatggcatt
      121 gaggtacgag taagggctgg cgtcgttcga gcgcggcctc cgtacacgga tcggctggcc
      181 gctctccccg gccctcgtca tcccgcaggc gcgccagcgc ctgctggacc tgccgtgccc
      241 tgcctggtgg caggccacag tgcgttgctt tgcggggcgc tgattgcgaa gattgcgacg
      301 aacgatgagt gcccacggaa ccccaggctt tcaggatcac ttctcgtctc gcgccggcga
      361 gtacgcgcgg ttccgtccgc ggtacccgcc ggcgcttttc gatctcgtcg cagcgctccc
      421 ggagcggcgt cgactcgcgc tcgacgtcgg cacggggaac gggcaggcgg cggtcgccct
      481 cgccgggcat ttcgagaagg tgatcggcat cgacggcagc gccgcccagc tcgagagggc
      541 acagccgcat ccgcgcgtcg agtaccgcct tggccgcgcc gaggagacgg gaatgcctga
      601 cggcagcgtc gacctcgtca ccgtcgcgca ggcggcgcac tggttcgacc tcgaccgctt
      661 ctacgccgag gcgcggcgcg ttgcagcgaa gggcggcgcg ctcgcgctct ggagctacga
      721 cgatcccgtc atcgttggcg acgcggcctc cgacgcgctg ctccaggagt tcaacctcgg
      781 cacgatgggc ccatggtggc cacgcgaccg cgcgaaagtc ggactcggcc aagcacagct
      841 gccattcccc ttcgacgaac tcggcgtgcc aacgatgacg ctgtcgcagg actggacgcg
      901 cgccgagctc gcgggctacg cgcggagctg gtcgtcggtg agccgttacg tggccgagcg
      961 tggcgaggac ccggtgatcg acttcgagcg cgcgctcagc cgcacctggc ccgacgcgca
     1021 gcaacgcaag cgcatcgagt ggccacttgc cgtgcgcgca ggacgtctct gatcgaaagt
     1081 gcctcggtcg ggcttctatc cgccgacttt cacgccgagg gccacagaga acacaaaggg
     1141 ccgcagaggt cccggcgaga ttcactcgcc ccgctcgccc caaaatctct cgaaatgttg
     1201 aacggcttgt gaagccgcgg acgacgcgga caacgcggac tcaggacagt tgtccgcgta
     1261 ctccgcgtcg tccgcggcca atcagctgtt ctctgcggcc ccctgtgtac ctctgcgtct
     1321 ctgcggtgca acgacagctc agaagccgac cgaggcactt cctccaacgg ttagcgcatc
     1381 cgggcagccg ccgtgcgcaa ctcgtcccag gctgccgcga cgtgccggcg ctcggtgcgg
     1441 atgttaccga tggcgagccg cagtacgtag cgcccaccca gcttggtgtg cgacaggaag
     1501 gcgcggcccg atgcgttcac gcgctcgagg atcgacgcgt tgagcgcgtc ggcgtccgcg
     1561 tcactgacgc ctgtcggtgc gcagcggaag cagacggtgg agaagggaac gggggccacc
     1621 acctcccagc ctttctcccc gcgcacccat cccgcaaagt cgcgcgcaag ggcgcagtgc
     1681 gccgcgatgc gcgacgagag tccctcggcg ccgaaggcac ggatcaccat ccagagcttc
     1741 agcgcgcgga agcggcggcc gagctgcacg ccgta
//
LOCUS       DATAIQ010001117         2427 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_366656, whole genome shotgun sequence.
ACCESSION   DATAIQ010001117 DATAIQ010000000
VERSION     DATAIQ010001117.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2427)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2427)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2427
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_366656"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            37..1872
                     /gene="ftsH"
                     /locus_tag="VHN20_18470"
     CDS             37..1872
                     /gene="ftsH"
                     /locus_tag="VHN20_18470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015667854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HEX2727814.1"
                     /translation="MNKGTRFHLWYWIAAFVGLMILQYVYVTVRQVATIPYSQFEQLL
                     KDGKVTEIAVSDRFIQGALREPLADGKSRFVTTRIDPQFAEELQRYNVRYTGQIESTF
                     LSDLLSWVVPVLLFFGLWTYLARRVAGQGGLGGLMTIGKSKAKVYVESDTGVTFADVA
                     GVDEAKEELAEVVDFLRNPERYSRLGGRMPKGILLVGPPGTGKTLLAKAVAGEAKVPF
                     FSISGSEFVEMFVGVGAARVRDLFQQARERAPAIIFIDELDALGRARGIGPYGGGHDE
                     KEQTLNQLLVELDGFDTKTGLVLLGATNRPEILDPALLRAGRFDRQVLVDRPDKKGRV
                     DILKVHLRKVKLAPDVDVEKVAALTPGFTGADLANLVNEAALLATRRGADAVAMSDFN
                     DAVERIVAGLEKRNRLLNPREREIVAYHEMGHALAALALPGVDPVHKVSIIPRGVGAL
                     GYTIQRPTEDRFLMTREELENKMAVLLGGRAAELIVFGHYSTGAADDLRRVTDIARSM
                     VTRYGMSQKLGNVAYDRDPRTFLTGPDLPMPQREHDYSESSAAAIDEEVRTIVDTAFQ
                     RTIGILKERRDVLERAARRLLEKETLDEAELAAIVGHEPPKIAAE"
     gene            complement(1953..>2427)
                     /locus_tag="VHN20_18475"
     CDS             complement(1953..>2427)
                     /locus_tag="VHN20_18475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009494117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015658 - branched-chain amino acid
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     substrate-binding protein"
                     /protein_id="HEX2727815.1"
                     /translation="VYFGGLHTEAGLIIRQMRDQGLKAPLMGGDGIVSAEFVSVAGPG
                     AEGTLMTFNPDPRKNPNAKTVLAKFKAKNFEPEAYTLYAYAAVQIFAEAAKQAKSVEG
                     KKLSEVMKQGKPFKTVIGDISFDKKGDITRPDYIMYEWKKGPDGKIDYTGNELSM"
BASE COUNT          391 a          828 c          809 g          399 t
ORIGIN      
        1 cgggcggggg cgttgcatcc gggcgaggac acggccgtga acaagggcac ccgcttccat
       61 ctctggtatt ggatcgccgc cttcgtcggg ctcatgatcc tgcaatacgt ctatgtcacc
      121 gtgcggcagg tggcgacgat cccgtacagc cagttcgagc agctgctcaa ggacggcaag
      181 gtcaccgaga tcgcggtctc cgaccgcttc atccagggcg cgctgcgcga gccgcttgcc
      241 gacggcaagt cgcgcttcgt cacgacccgc atcgacccgc aattcgccga ggaattgcag
      301 cgctacaacg tgcgctacac cgggcagatc gagagcacct tcctcagcga cctcctgtcc
      361 tgggtcgtgc cggtcctcct gttcttcggc ctgtggacgt atctggcccg gcgcgtcgcc
      421 gggcagggcg gcctcggcgg cctgatgacg atcggcaaga gtaaggccaa ggtctatgtc
      481 gagtccgaca cgggcgtcac cttcgccgac gtcgccgggg tcgacgaggc caaggaggaa
      541 ctggccgagg tcgtcgactt cctcaggaat ccggagcgct acagccggct cggcgggcgc
      601 atgccgaagg gcatcctgct cgtcgggccg cccggcaccg gcaagaccct gctggccaag
      661 gcggtcgccg gcgaggccaa ggtgccgttc ttctcgatct ccggctccga gttcgtcgag
      721 atgttcgtcg gcgtcggcgc ggcgcgcgtg cgcgacctgt tccagcaggc gcgcgagcgg
      781 gcgcccgcca tcatcttcat cgacgagctc gacgcgctcg gccgcgcccg cggcatcggc
      841 ccttacggcg gcggccacga cgagaaggag cagaccctca accagctgct cgtcgaactc
      901 gacggcttcg acaccaagac cggcctcgtc ctgctcggcg ccacgaaccg gcccgaaatc
      961 ctcgatccgg cgctgctgcg cgccggccgc ttcgaccggc aggtcctggt cgaccggccg
     1021 gacaagaagg gacgcgtgga catcctcaag gtgcatctgc gcaaggtgaa gctggcgccg
     1081 gacgtcgacg tcgagaaggt cgcggcgcta acgccgggct tcacgggcgc cgatctcgcc
     1141 aacctggtca acgaggccgc gcttctggcc acccggcgcg gtgcggacgc agtggcgatg
     1201 agcgacttca acgatgccgt cgagcgcatc gtcgccgggc tcgagaagcg caaccggctg
     1261 ctcaatccgc gcgagcgcga gatcgtcgcc tatcacgaga tgggccacgc gctcgcggcg
     1321 ctggcgctcc ccggcgtcga cccggtgcac aaggtgtcga tcattccgcg cggcgtcggc
     1381 gccctcggct acacgatcca gcggccgacc gaggaccgct tcctgatgac gcgcgaggag
     1441 ctcgagaaca agatggcggt gctgctcggc ggccgcgccg cggagctgat cgtgttcggg
     1501 cactactcga ccggcgcggc tgacgatctc cgccgcgtta ccgacatcgc gcgcagcatg
     1561 gtgacgcgtt acggcatgtc gcagaagctc ggcaacgtcg cctatgaccg cgatccgcgc
     1621 accttcctga ccgggcccga cctgccgatg ccgcagcgcg agcacgatta cagcgagagc
     1681 tccgcggcgg cgatcgacga ggaggtgcgc acgatcgtcg acaccgcgtt ccagcgcacg
     1741 atcggcattc tcaaggagcg ccgcgacgtc ctcgagcgcg ccgcgcggcg gctcctcgag
     1801 aaggagacgc tcgacgaagc cgagctcgcc gccatcgtcg gccacgagcc gccgaagatc
     1861 gcggccgaat agccctgcgc gcgcaaaaaa aaagcgcccc taaaaccggg gcgctggact
     1921 ttgtctctcc cctttcgggg aggcgggcga gtttacatgc tgagctcgtt gccggtgtag
     1981 tcgatcttgc cgtcggggcc cttcttccat tcgtacatga tgtagtcggg acgggtgatg
     2041 tcgcccttct tgtcgaagga gatgtcgccg atcacggtct tgaacggctt gccctgcttc
     2101 atcacctcgg acagcttctt gccctcgacc gacttggcct gcttggccgc ctcggcgaag
     2161 atctgcacgg cggcgtaggc gtagagcgtg tacgcttccg gctcgaagtt cttggccttg
     2221 aacttggcca ggacggtctt ggcgttcggg ttcttgcgcg gatccggatt gaaggtcatc
     2281 agcgtgcctt cggcaccggg gccggcgacc gatacgaact cagccgaaac gatgccgtcg
     2341 ccgcccatga gcggggcctt gagtccctgg tcgcgcatct ggcggatgat gagccccgct
     2401 tccgtgtgca ggccgccaaa atagacc
//
LOCUS       DATAIQ010001118         1944 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_77985, whole genome shotgun sequence.
ACCESSION   DATAIQ010001118 DATAIQ010000000
VERSION     DATAIQ010001118.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1944)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1944)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1944
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_77985"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            262..1008
                     /locus_tag="VHN20_18480"
     CDS             262..1008
                     /locus_tag="VHN20_18480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011159014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX2727816.1"
                     /translation="MAGRLEGKVAVVTAAGQGIGRAIAEAFVHEGATVWATDVDTAKL
                     EGLKRTKRQKLDVLSTEAVEAFAEKVGHVEILANCAGYVHHGTVLDCSEDDWDFAFDL
                     NVKSMHRTIKAFMPGMVARGSASIVNISSGASTVKAAPNRYVYGATKAAVIGLTKAVA
                     LDFITKGVRCNCICPGTIQSPSLDQRIATLAASSHRSEAETRQLFVARQPMERLGTPE
                     EIAAAAVYLASDESAFTTGTAMIVDGGWSL"
     gene            1066..>1944
                     /gene="denD"
                     /locus_tag="VHN20_18485"
     CDS             1066..>1944
                     /gene="denD"
                     /locus_tag="VHN20_18485"
                     /EC_number="1.1.1.410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014495981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-erythronate dehydrogenase"
                     /protein_id="HEX2727817.1"
                     /translation="MHILVIGAAGMVGRKLVERLTRDGSLGGRQIAKATLHDVIEPAA
                     APAPFEVKTLASDFAVPGEAEKLVAGRPDVIFHLAAIVSGEAEADFDKGYRINLDGTR
                     MLFDAIRKTGGGYKPRVVFTSSIAVFGAPFPDAIGDAFFTTPLTSYGTQKAVGELLLS
                     DYTRRGFFDGVGIRLPTICVRPGKPNKAASGFFSNIIREPLNGEEAVLPVGEDVRHWH
                     ASPRSAVGFLIHAATIDGEKLGPRRNLTMPGVSVTVAEQIDALRKVAGDKVVGRIRRE
                     PDTTIMRIVEGWPRTFE"
BASE COUNT          338 a          655 c          636 g          315 t
ORIGIN      
        1 cgccagtcca gcgacctgca gcgatgcgcc agtgtcgttc attccgctac tcccaggacc
       61 cgaccgtccc gataaacaca aattttatac gtaatttgta tctgactgtc gctcaggccg
      121 tgtaaattag tgttccaatc catctctgtc cagggttttg ttcggaataa cgaacgccga
      181 tttgccgcgg attcgtccct ccggccgcta gaagctggcc cgatatgctg tcaggcttgt
      241 ggaattatgg gggacgacgc gatggcggga cgactggaag gcaaggtggc ggtcgtgacg
      301 gcggccgggc aggggatcgg gcgcgcgatc gccgaagcct tcgtgcacga gggggccacg
      361 gtctgggcga cggacgtcga taccgccaag ctggaaggcc tcaagcggac gaagcgacag
      421 aagctcgacg tgctgtcgac cgaggcggtc gaagccttcg cggagaaagt cggccacgtc
      481 gagatcctcg cgaactgcgc cggctacgtc catcacggca cggtccttga ctgctcggag
      541 gacgactggg acttcgcctt cgacctcaac gtcaagtcga tgcaccggac catcaaggcc
      601 ttcatgccgg gcatggtcgc acgcggctcg gcctcgatcg tcaacatctc gtcgggcgcc
      661 tcgaccgtga aggcggcgcc caaccgctac gtctacgggg cgaccaaggc cgccgtgatc
      721 ggcctcacca aggccgtcgc cctcgacttc atcaccaaag gcgtgcgctg caactgcatc
      781 tgcccgggca ccatccagtc gccctccctc gaccagcgca tcgcgacgct tgccgcctct
      841 tcgcacaggt cggaggccga aacgcgccag ctgttcgtgg cgcgccagcc catggagcgg
      901 ctcggcacgc ccgaggagat cgccgccgcc gcggtctacc tggcaagcga cgagagcgcc
      961 ttcacgaccg gcaccgcgat gatcgtcgac ggcggctgga gtctctaatg taaagagaag
     1021 accgggtgcc cggctcgagc cgcggcgcca aggagggagg cacccatgca catcctggta
     1081 atcggcgcgg ccggcatggt cggtcgcaag ctcgtggagc ggctgacgcg cgacggaagc
     1141 cttggcgggc ggcagattgc gaaagcgacc ctgcacgacg tcatcgagcc ggccgcggcc
     1201 cccgcgccgt tcgaggtcaa gaccctggcg tcggatttcg ccgtgccggg cgaagccgaa
     1261 aagctcgtgg cggggcggcc ggatgtaatc ttccacctcg ccgccatcgt gtcgggggag
     1321 gccgaagccg atttcgacaa agggtatcgc atcaatctcg acggcacgcg catgctgttc
     1381 gacgcgatcc gcaagaccgg cggcggctac aagccgcgcg tcgtcttcac ctcgtcgatc
     1441 gccgtgttcg gcgcgccctt cccggacgcg atcggcgacg cgttcttcac caccccgctg
     1501 accagctacg gcacgcagaa ggcggtcggc gagctcctgc tgtccgatta cacgcggcgc
     1561 ggctttttcg atggcgtcgg catccggctg ccgaccatct gcgtgcgccc cggcaagccc
     1621 aacaaggcgg cctccggctt tttctccaac atcatccgcg agccgcttaa cggcgaagag
     1681 gctgtgctgc cggttggcga agacgtgcgc cattggcacg cgagcccgcg ttcggcggtc
     1741 ggcttcctca tccatgcggc gaccatcgac ggcgagaagc tcggcccgcg ccgcaacctc
     1801 accatgccgg gcgtctcggt gaccgtggcc gagcagatcg acgccctgcg caaggtcgcg
     1861 ggcgacaagg tggtgggccg catccgccgc gagccggata cgacgatcat gcgcatcgtc
     1921 gaggggtggc cgcgcacctt cgag
//
LOCUS       DATAIQ010001119         3127 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_366742, whole genome shotgun sequence.
ACCESSION   DATAIQ010001119 DATAIQ010000000
VERSION     DATAIQ010001119.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3127)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3127)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3127
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_366742"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            7..1326
                     /locus_tag="VHN20_18490"
     CDS             7..1326
                     /locus_tag="VHN20_18490"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010683817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBOAT family O-acyltransferase"
                     /protein_id="HEX2727818.1"
                     /translation="MHWLVERFRPHWRLPLLGALSIAFYGYWDWRFIPLLIGSILVNW
                     LVAVLFIDKRAEILIGLALAANLLVLAVFKYFAFFADLASLVPGIAAPRYDFVLPLGI
                     SFFTFHHVMYLVDLRAGRAPRYDLVRYALYIAFFPQVLAGPLVRWSEIMHQLDERPYS
                     RPDGNERVARGLMLLAVGLAKKVFLGDPLSEYANPVFQAAAEGKAVTFLEAWQGTLGF
                     TLQIYFDFSGYTDMALGLALMFGIVLPQNFNVPYRAVSLSEFWRRWHMTLSRFLRDYL
                     YIPLGGNRHGLTTQLSALFATMALGGLWHGAGLTFVAWGAAHGMGLGAGVVWRRTGLA
                     MPAVAGWALTLAFVILTWVLFRAQTFDAALRMYQGLFGLNGWGTEFKWRSIALAAAIA
                     VIGPTAWGTVHRVPPWRVAAVGFAALLAMVLFKLGDDANYEFIYFQF"
     gene            1367..2329
                     /locus_tag="VHN20_18495"
     CDS             1367..2329
                     /locus_tag="VHN20_18495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727819.1"
                     /translation="MTLVASTFLLFGGIAALAVVLDPFDTGRFALLRARGVPDQGPRM
                     AHASRGRDPQFDGAIIGNSHIQLVSPERLAAATGVRFVSLTVPATGPKEQFALLDYFL
                     RNRIGPARALVFGIDAYWCTPDQELRNSSPFPFWLYDPSPIAYVRGLIRTDTLERLPQ
                     RLQYALGMSSRRRARPDGYWDYEQDPRWPAETPAERLAARGTAGMMNDTGRFPALEKL
                     AKVLSGLPADLDVVLVRPPAYITAQPEPGTALARSDAACLAALQRVAAGRPRTTSIDW
                     QVDRPENRTAANYLDHTHYRGTLAKAVERDIAQALARHATEAKR"
     gene            2517..2939
                     /gene="dksA"
                     /locus_tag="VHN20_18500"
     CDS             2517..2939
                     /gene="dksA"
                     /locus_tag="VHN20_18500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012333933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019899 - enzyme binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-binding protein DksA"
                     /protein_id="HEX2727820.1"
                     /translation="MAKKIIIDEGYRPTDAEPFMSERQREYFRRKLRHWKNEILREAQ
                     TTLVALQSESENHPDLADRASSETDRAIELRARDRQRKLIAKIDAALARIDEGTYGYC
                     EETGEPIALKRLEARPIATLSLEAQERHERNERVYRDD"
BASE COUNT          476 a         1092 c         1013 g          546 t
ORIGIN      
        1 ttcgcgctgc actggctcgt ggagcggttc cgcccgcact ggcggctgcc gctgctcggg
       61 gcgctctcga tcgccttcta cggctactgg gactggcgct tcattccgct gctgatcggc
      121 tcgatcctgg tcaactggct cgtcgccgtg ctgttcatcg acaagcgcgc cgagatcctg
      181 atcggtctgg cgctggccgc gaacctgctc gtgctggcgg tcttcaaata cttcgccttc
      241 ttcgccgacc tcgccagcct ggtgcccggc atcgccgcgc cgcgatacga cttcgtgctg
      301 ccgctcggca tctcgttctt caccttccac cacgtcatgt atctggttga tctgcgcgcc
      361 ggacgggcgc cgcgctacga cctcgtccgc tacgccctct acatcgcctt cttcccgcag
      421 gttctcgccg gcccgctcgt gcgctggagc gagatcatgc accagctcga cgaacggccc
      481 tacagccgcc cggacggcaa cgagcgcgtc gcccgtggtc tcatgctgct ggccgtcggg
      541 ctggccaaga aggtgttcct cggcgatccg ctgtcggaat atgccaatcc cgtgttccag
      601 gccgcggcgg aaggaaaggc ggtcacattc ctggaggcgt ggcagggcac gctcggcttc
      661 acgctgcaga tctatttcga cttttcgggc tacaccgaca tggcgctcgg cctggcgctg
      721 atgttcggca tcgtgctgcc gcagaacttc aacgtcccct atcgggcggt gtcgctgagt
      781 gagttctggc gccgctggca catgacgctg tcgcgcttcc tgcgcgacta tctttacatc
      841 ccgctcggcg gaaaccggca cgggctgacg acgcaattgt cggcgttgtt cgccacgatg
      901 gcactgggtg ggttgtggca cggcgccggc ctgaccttcg ttgcctgggg cgcggcgcac
      961 ggcatgggcc ttggcgccgg cgtggtgtgg cggcgcaccg gcctcgccat gccggccgtg
     1021 gcgggctggg cgctgacatt ggctttcgtc attctcacgt gggtgctgtt ccgcgcccag
     1081 accttcgacg ccgcgctacg catgtaccag ggcctgttcg gcctgaacgg ctggggcacg
     1141 gaattcaagt ggcgctcgat cgccctcgcc gccgccatcg cggtgatcgg cccgacggcg
     1201 tgggggaccg tgcaccgggt tccgccgtgg cgggtcgccg ccgtcgggtt cgcggcgctg
     1261 ctcgccatgg tcctgttcaa gttgggggac gatgcgaatt acgagttcat ctacttccag
     1321 ttctgaccgg gtcggctccg gccccgtcgc ctggcggcgc ttcgccgtga ccctggtcgc
     1381 gtcgacgttt ctgctgttcg gcgggatcgc cgcgctcgcg gtcgtgctgg acccgttcga
     1441 cacgggccgc ttcgcgctgc ttcgcgccag gggcgtgccc gaccagggcc cgcgcatggc
     1501 gcatgcgagc cgcggccgcg acccgcaatt cgacggcgcc atcatcggca actcgcatat
     1561 ccagctcgtc tcgccggagc ggctcgccgc ggccaccggc gtccggttcg tatcgctgac
     1621 cgtgccggcg accgggccca aggagcagtt cgcgctgctc gactatttcc tgcgcaatcg
     1681 catcggcccg gcccgcgccc tggtattcgg gatcgacgcc tattggtgca cgcccgacca
     1741 ggagctcagg aattccagcc cgttcccgtt ctggctctat gatccgagcc cgatcgccta
     1801 tgtgcgcggc ctgatccgca ccgacacgct ggagaggctg ccgcagcgcc tgcaatacgc
     1861 cctcggcatg tcgtcgcgcc ggcgggcgcg gccggacggc tactgggact acgagcagga
     1921 tccgcgctgg cccgccgaaa ccccggcgga gcggctcgcg gcgcgcggga ccgccggcat
     1981 gatgaacgac acgggccgtt tcccggctct cgagaagctg gccaaagtcc tgtccggcct
     2041 gccggcggac ctcgacgtcg ttctggttcg gccgccggcc tatatcacgg cgcagccgga
     2101 accgggcacg gcgctcgcca ggtcggacgc ggcctgtctt gctgcgctgc aacgtgtcgc
     2161 cgccggccgc ccccgcacca cgtcgatcga ctggcaggtc gaccgccccg agaaccggac
     2221 cgccgccaat tacctcgacc atacccacta ccgtggcacc ctggccaagg cggtggagcg
     2281 cgatatcgcc caggctctcg cgcgtcacgc gaccgaagct aagcggtaac agaactgcaa
     2341 caaccaccct ctacaagccg tgggtaagta gatcaggttg agtcgcggcc gttaaggaca
     2401 aggttccacg gcttcgtgac cttcaagcgc gttgtcgaca ccgatctcat ccattatagg
     2461 accgcgcaaa ccgctaattc aggcgggagg aaaacgaaca gcctgttgag gggccaatgg
     2521 cgaaaaagat catcattgat gagggctatc gtccgacgga cgccgagccc ttcatgagcg
     2581 agcggcaaag ggaatatttt cgtcgcaagt tgcggcactg gaagaacgaa atcctacgcg
     2641 aagcccagac caccctggtc gccctgcaaa gcgaaagcga gaaccacccc gacctggccg
     2701 accgcgcctc gtcggaaacc gatcgggcga tcgagctgcg cgcccgcgac cggcagcgca
     2761 agctgatcgc caagatcgat gccgcgctcg cccgcatcga cgagggcacc tacggctatt
     2821 gcgaggaaac cggcgagccg atcgccctga agcgcctcga ggcgcgcccc atcgccaccc
     2881 tgtcgctcga agcccaggag cggcatgagc gcaacgagcg cgtctacagg gatgactgac
     2941 catcacccgg cgacgtccac cgacttcggc ggctcgattt tcgtctaagt cgacccggcc
     3001 tggccggcgg gccggacgta tgtccagtag agatagcagg cgggcgccag gaccaggatc
     3061 gagccggctg cttcgacgct gccgtgcacc agcgatcgga acggccaggg caagccggcc
     3121 cgggtgg
//
LOCUS       DATAIQ010001120         2390 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_78013, whole genome shotgun sequence.
ACCESSION   DATAIQ010001120 DATAIQ010000000
VERSION     DATAIQ010001120.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2390)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2390)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2390
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_78013"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(221..1417)
                     /locus_tag="VHN20_18505"
     CDS             complement(221..1417)
                     /locus_tag="VHN20_18505"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HEX2727821.1"
                     /translation="MANARAQGSGYFAFPPRAGDNPWLDLVRTIAIALVLLRHGYHAS
                     AASQEVAPAFLHALAMNGWVGVDLFFVLSGYLISGHLLRAGFGTSRFVLWRYLATRAL
                     RIVPAYLAVMALIVAAAFPFYRIDPAHLGGRVAYHLLFLQDYLPSNINVVFWSLGVEE
                     KFYLTAPLLVWLALVQKTLARALLVLSAIAALSPALRAWTYVQAAPADYVHFFQILRS
                     PFHACLEPLVAGVAIAVAQATGAARSSGRAGRRHFAVALLLLAAWLMSHEFMRTIGAF
                     DAVLQPVVIAGLCAFVTLAAVRMNGMAMRCEGLPRALARLSYALYLVHYPLVPLALAV
                     SAAAAWPAAAFWLVYLVTALAAAALLHWAVEKPFLKLKDELLRRPAPRHAPLGRFAGC
                     DNARAG"
     gene            complement(1430..>2390)
                     /locus_tag="VHN20_18510"
     CDS             complement(1430..>2390)
                     /locus_tag="VHN20_18510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727822.1"
                     /translation="ALGVGTGLLVTAYPQLFVPVLILDLWFLGYHHVISTYTRLCFDR
                     QSFASSRFLVFGLLPMVAVATLLVAIVVGLWAIVSLYFYWQWFHYTRQSWGISRAYRG
                     KDRDALYDDGWIDQAIFYALPVLGILIRSHQDPGTFLGLELKVVPVPGWLVSVAAVAT
                     GVLMTVWLARRVQAWRMNRLPAVHTLYMLSHFAVFAISYLMIADVTYGWLTINIWHNG
                     QYILFVWLFNTRRFKDGVDPEARFLSYISQPHRLWLYVLTCIGITGVVYWAVLGTLNA
                     LFFAGLSATIVLYQIVNFHHYIVDSLIWKVRKAPIRQTLGLAG"
BASE COUNT          501 a          737 c          846 g          306 t
ORIGIN      
        1 atccacggtc cctcctcatg tgcggcgtgc cgtcagcctt tacgaccaca ggccccagga
       61 ttgccagcgc ggcatttcat ttcgaaagtt tcgaggacgt caaaggtcgc ccggacgtga
      121 ggatcgcgat ctcggggatt ccgacacgcg aggcgccgcc gcgcaaacgc cgcgccggcg
      181 gcggtcattg ctctgctcga tggcgcctgc gcccggctcg tcacccggcc ctggcgttgt
      241 cgcagccggc aaaacgcccg agcggagcat ggcgcggcgc cgggcgacgc aagagctcgt
      301 ccttcagctt caggaacggc ttttcgacgg cccagtggag gagcgcagcc gccgccaagg
      361 cggtcacgag atagaccagc cagaacgcgg cagcgggcca ggccgcggcg gcgctgacgg
      421 cgagcgccag gggcacgagg ggatagtgca ccaggtagag cgcgtagctg aggcgggcga
      481 gcgcgcgggg cagcccttcg caacgcatgg ccatgccgtt catgcgcacg gccgcgagcg
      541 tcacgaatgc gcacaggcca gcgatgacga ccggctgcag cacggcgtcg aacgcgccga
      601 tcgtgcgcat gaattcatgg ctcatgagcc atgccgccag gagaagcagc gccacggcga
      661 aatggcgccg gcccgcccga cccgaggacc tcgccgcgcc ggtcgcttgc gcgacggcga
      721 tggcaacgcc cgcgacgagc ggctcgaggc aagcatggaa cgggctgcgc agaatctgga
      781 agaaatgcac gtagtcggcg ggagccgcct gaacgtaggt ccaggcgcgc agggcgggcg
      841 acaaggcagc gatcgccgac agcacgagca gcgcgcgggc gagcgtcttc tgcaccaggg
      901 cgagccatac gaggagcggc gccgtgagat agaatttctc ttcgacgccc agcgaccaga
      961 acacgacgtt gatgttcgac ggcagataat cctgcaggaa gagcaggtgg taggcgacgc
     1021 gcccgccgag atgggcagga tcgatccgat agaagggaaa ggcggcggcc acgatcaatg
     1081 ccatgacggc gaggtaggcc ggcacgatgc gcagcgcccg cgtcgcgagg taacgccaca
     1141 gcacgaagcg gctggtgccg aagccggcgc gcaggagatg gccgctgatg aggtagcccg
     1201 acaggacgaa gaacagatcg actccgaccc agccgttcat ggcgagggcg tgcaggaagg
     1261 caggcgccac ctcctgcgac gcggcgctcg cgtgatagcc atgccggagc aggaccagcg
     1321 cgatggcgat ggtgcgcacg agatcgagcc acggattgtc gcctgcgcgc ggcgggaagg
     1381 cgaaatagcc gctgccctgg gctcttgcgt tggccatggc cggacgcgtt cagccggcga
     1441 gaccgagcgt ctggcggatc ggcgccttgc gcaccttcca gatcagcgaa tcgacgatgt
     1501 agtggtggaa gttgacgatc tgatagagga cgatcgtcgc cgacaggccg gcgaagaaaa
     1561 gcgcgttgag ggtgccgagc acggcccaat agacgacgcc cgtgatgccg atgcaggtca
     1621 gcacgtaaag ccacagccgg tgcggctggc tgatgtagga caggaagcgc gcttccggat
     1681 cgaccccgtc cttgaagcgc cgcgtgttga acagccagac gaacaggatg tattgcccgt
     1741 tgtgccagat gttgatggtc agccagccat aggtgacgtc ggcgatcatg aggtagctga
     1801 tcgcgaagac cgcgaaatgg ctgagcatgt agagcgtgtg cacggccggc agccggttca
     1861 tgcgccaggc ctgcacgcgg cgcgcgagcc agacggtcat gaggacgccg gtggcgacgg
     1921 cggcaaccga caccagccag cccggaaccg gaaccacctt gagctcgagg ccgaggaacg
     1981 tgcccggatc ctgatgcgac cggatcagga tgccgaggac cggaagcgca tagaagatcg
     2041 cctggtcgat ccagccgtca tcgtagagcg catcgcggtc cttgccgcgg taggcgcgcg
     2101 agatgcccca gctctggcgc gtgtaatgga accactgcca atagaaatag aggctgacga
     2161 tcgcccaaag gccgacgacg atggccacca ggagggttgc caccgccacc atcggcaaca
     2221 gcccgaacac caggaagcgc gagctcgcaa aactctgccg gtcgaagcaa aggcgcgtgt
     2281 aggtcgagat gacgtggtga tagccgagaa accaaagatc gaggatcaga accggcacga
     2341 acagctgcgg ataggcggtc acgaggagtc ccgtgcccac acccagagct
//
LOCUS       DATAIQ010001121         2606 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_366818, whole genome shotgun sequence.
ACCESSION   DATAIQ010001121 DATAIQ010000000
VERSION     DATAIQ010001121.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2606)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2606)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2606
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_366818"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..742)
                     /locus_tag="VHN20_18515"
     CDS             complement(<1..742)
                     /locus_tag="VHN20_18515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015685786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX2727823.1"
                     /translation="MMRILALACMLLAAPATAQTMTKLRAGMVTGIDQIALPIALERG
                     FFEKHGLDVDIARPYATGVDALNALQAGESETVQVGVPMIGAVLRGMDLVALGNYSGS
                     ATRMGSDATMALIARGDAGIKPGDLSSLKGKRIAASFGTINHLYVLALIEKAGLTPND
                     VTLVNTPPPDMTVALLAKGIDAFSGWDPWPIVALKDVPGAVEVIRGGDTIAYLGYNVG
                     LRPWVEKNGETIEKFLAAVSEADKWMRAN"
     gene            complement(749..1078)
                     /locus_tag="VHN20_18520"
     CDS             complement(749..1078)
                     /locus_tag="VHN20_18520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009026126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727824.1"
                     /translation="MSLVRAVLASNKGRFVLALIALYLAWQVWLTLTAPGKIAPFPGD
                     RERVNVLATLPCPAERFHVLVFQGYGRVSGTAGNTVEIRNVRRSDLRAMARHYWVRRV
                     EPLPQGG"
     gene            complement(1075..1833)
                     /locus_tag="VHN20_18525"
     CDS             complement(1075..1833)
                     /locus_tag="VHN20_18525"
                     /EC_number="7.6.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018322772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2727825.1"
                     /translation="MKSLTIRNLAKTYFDPYKGTQVDAVRGISLEVREGEFVAIVGPS
                     GCGKSTVLNLIAGFIPPSAGDILVDERPVRGPGPDRGVVFQSFALFPWKTVLDNVAFG
                     PKMRGVGKAEREAIARDFLGLAGLSHAADRYPNELSGGMQQRVGVARALANEPDVLLM
                     DEPFASVDAQTRMTLQEELTRIWQERRPTIVFITHDVGEAVFLANRVVVLSAGRILDE
                     VAIDLPRPRRWDDLVESDAFKTLSGKVLHLVRSA"
     gene            complement(1830..2603)
                     /locus_tag="VHN20_18530"
     CDS             complement(1830..2603)
                     /locus_tag="VHN20_18530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015685783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX2727826.1"
                     /translation="MRATAPVPGLRAFVPFIPLIALWAIVAEAEVFPRVFFPGPAEVV
                     RAFVDLTWKGILPAYLHDSAVRLLVGALAGMAIGIPLGLLIGLSPRAHALFWPVLLFF
                     QAIGDIAWLPILLIWFGFGLTTMTFVIVYTVLFPIVLNIVLGVRSIPTDMHRAAQSLG
                     ASRARILWEVVLPGALPNLITGLRNGLGFGWRALIAAEIIVGTSGIGFLMFDARRAGS
                     VVEIMLGMIVLGILWYIVDAWILAPIERATGQRWGLVNR"
BASE COUNT          437 a          863 c          934 g          372 t
ORIGIN      
        1 gattggcgcg catccacttg tcggcttcgg agacggcggc gaggaatttc tcgatggtct
       61 cgccgttctt ctctacccag ggtcgcaggc ccacgttgta gccgaggtag gcgatggtat
      121 cgccgccgcg gatcacctcg acggcgccgg gcacgtcctt cagcgccacg atcggccagg
      181 gatcccatcc cgagaaggcg tcgatgccct tcgccaggag cgccaccgtc atgtccggcg
      241 gcggcgtgtt gacgagcgtg acgtcgttcg gtgtcagccc ggccttctcg atcagggcca
      301 gcacgtagag gtggttgatg gtgccgaacg aggcggcgat gcgcttgccc ttgaggctcg
      361 acaggtcgcc cggcttgatg cccgcgtcgc cgcgggcgat cagcgccatg gtggcgtccg
      421 agcccatcct ggtggcgctg ccgctgtagt tgccgagcgc gacgagatcc atgccgcgca
      481 gcaccgcgcc gatcatcggc acgccgacct gcacggtctc gctctcgccg gcctgcaggg
      541 cgttgagggc gtcgacgccg gtcgcgtagg gccgggcgat gtcgacgtcg agcccgtgct
      601 tctcgaagaa gccgcgctcg agcgcgatcg gcaacgcgat ctggtcgatg ccggtgacca
      661 tgccggcgcg cagcttggtc atggtctgcg ccgtcgccgg cgcggcgagg agcatgcagg
      721 cgagcgcaag gattctcatc atctatcgtc atcctccctg tggcagcggc tcgacgcgcc
      781 ggacccagta atggcgggcc atggcgcgca ggtcgcttct tcggacgttg cggatttcga
      841 ccgtgttacc ggccgttccc gacaccctac catagccctg aaaaaccaga acgtggaagc
      901 gttcggcggg acagggcagg gtcgcgagca cgttgacccg ctcccggtcg ccggggaacg
      961 gggcgatctt gccgggcgcg gtgagcgtca gccagacctg ccaggcgagg tagagcgcga
     1021 tcagtgcgag cacgaagcgc cccttgttcg aggcgaggac ggcgcgcacg aggctcatgc
     1081 ggagcgcacg aggtggagca ctttgcccga gagcgtcttg aaggcgtcgc tctcgacgag
     1141 gtcgtcccag cgccgcggcc gcggcaggtc gatcgccacc tcgtcgagga tgcgccccgc
     1201 cgagagcacg acgacccggt tggcgagaaa caccgcctcg cccacgtcgt gggtgatgaa
     1261 gacgatggtc gggcgccgct cctgccagat gcgggtgagc tcttcctgca gcgtcatgcg
     1321 cgtctgcgcg tcgacgctgg cgaagggctc gtccatgagc agcacgtcgg gctcgttggc
     1381 gagggcgcgg gcaacgccga cccgctgctg catgcccccc gacagctcgt tgggatagcg
     1441 gtcggcggcg tgcgagaggc cggccaggcc caggaagtcg cgggcgatcg cctcacgctc
     1501 ggccttgccg acgccgcgca tcttcgggcc gaaggcgacg ttgtcgagca ccgtcttcca
     1561 cgggaacagc gcaaaggact ggaacacgac gccgcggtcc ggccccgggc cgcggacggg
     1621 gcgctcgtcg accaggatgt cgccggcgct cggggggatg aagccggcga tcaggttgag
     1681 caccgtgctc ttgccgcagc cggacgggcc gacgatggcg acgaactcgc cctcacgcac
     1741 ctcgagcgag atgccgcgca cggcgtcgac ctgcgtgccc ttgtagggat cgaaatacgt
     1801 cttcgcgaga ttgcggatgg tcaggctctt caccggttca ccagccccca gcgctgcccg
     1861 gtggcgcgct cgatcggcgc caggatccag gcgtcgacga tataccagag gatgccgagc
     1921 acgatcatgc cgagcatgat ctcgaccacc gagccggccc gccgggcgtc gaacatcagg
     1981 aagccgatgc cgctcgtgcc gacgatgatc tcggcggcga tcagcgcacg ccagccgaag
     2041 ccgaggccgt tgcgcaggcc cgtgatcagg ttcggcaagg ccccgggcag cacaacctcc
     2101 cacaggatgc gcgcgcgcga cgcgccaagg ctctgcgcgg cccggtgcat gtccgtcggg
     2161 atcgaacgca cgccgagcac gatgttgagc acgatcggga acagcaccgt gtagacgatg
     2221 acgaaggtca tcgtggtcag cccgaagccg aaccagatca gaaggatcgg cagccaggcg
     2281 atatcgccga tcgcctggaa gaagaggagc acgggccaga acagcgcgtg cgcgcggggg
     2341 ctcaggccga tgagcaggcc gagcgggatg ccgatggcca tgccggcgag cgcgccgacg
     2401 aggaggcgca ccgcgctgtc gtgcagatag gccggcagga tgcccttcca ggtgagatcg
     2461 acgaaggcgc gcacgacctc cgccggtccg gggaagaaca cgcgcggaaa gacctcggcc
     2521 tcggcgacga tcgcccacag cgcgatcagc ggaatgaagg gcacgaaggc gcgcaacccc
     2581 ggcacgggcg cggtggcgcg catgta
//
LOCUS       DATAIQ010001122         3051 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_229325, whole genome shotgun sequence.
ACCESSION   DATAIQ010001122 DATAIQ010000000
VERSION     DATAIQ010001122.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3051)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3051)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3051
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_229325"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..298)
                     /locus_tag="VHN20_18535"
     CDS             complement(<1..298)
                     /locus_tag="VHN20_18535"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003532494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HEX2727827.1"
                     /translation="MARRKTPEELRSYRWFGVSDLRSFGHRSRTLQMGYEREDFMNKP
                     VVAIINTWSDINPCHTHFRARAEDVKRGVWQAGGFPLELPAMSLAENFVKPTTML"
     gene            complement(394..1119)
                     /locus_tag="VHN20_18540"
     CDS             complement(394..1119)
                     /locus_tag="VHN20_18540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014763294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FadR/GntR family transcriptional regulator"
                     /protein_id="HEX2727828.1"
                     /translation="MRLAKVEPRPSDDGTEAKLSAGIYEQLFERIVAGEFPVNSRLPS
                     ETELSRRFGASRPVVREALAWLRDDGIIVSRQGSGSYVRRRPDNAVLQFVPVGSIADI
                     QRCFEFRVGLEGSAAALAAARWEDDDLGAIKAALADLDACIESGRLGVEADEHFHRAI
                     ASATHNHYHVAVQVSLQPHIAFGMTLTRNLSLLRTRERLRLVQDEHVAILRAIEARDG
                     DAARAAMEAHIENARQRMFDGAT"
     gene            complement(1133..1840)
                     /locus_tag="VHN20_18545"
     CDS             complement(1133..1840)
                     /locus_tag="VHN20_18545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014763295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease activity regulator RraA"
                     /protein_id="HEX2727829.1"
                     /translation="MQESTRKKLAAVSTATITTVLFKRGFRNTFIQGIHLINPAAPRM
                     VGPAYTMRYIPAREDLDHIGVFEDRSHPQRKGVEECPPGAVFVIDSRRDPAAASAGSI
                     LGTRLMKRGVAGIVTDGGFRDTPDFAELPFPAYHAAAAAPTNLIKHHAADLNVPIGCG
                     DVPVYPGDILVGDREGVVVIPKEIADQVADEAFEQTVFEDFVHEKVAEGRSIFGLYPP
                     APEAREEFQRWRAEVGR"
     gene            1980..2948
                     /locus_tag="VHN20_18550"
     CDS             1980..2948
                     /locus_tag="VHN20_18550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEX2727830.1"
                     /translation="MRTRMTALALAMLALTIPGHAQDKWPSRQVTIVVPFTAGGTTDM
                     FARIFAQKMQETHGTPFIVENRAGAGGNLGAAAVAKGPKDGYTLLVGTVSTHAINPFL
                     YKSTGSDTVKDFQPVTLIARLPNLLVVNPKIPAKTVTEVVDYLQKNPGKLNYGSSGAG
                     TSTHLASELFQMLTKTKMNHVPYRSSGDVMNALMGGHIDLAFDNMTLAWPQAQSGTIR
                     AIAVTSTQRSPTAPEVPTVGDTLSGFEATSWHGLFAPAGTPRMIVDQLAAEVKRIFEE
                     PATQTKLREIGAVPSPMTPAQFVEFIAAERNKWQQVVKAAGLENAQ"
BASE COUNT          528 a         1019 c         1008 g          496 t
ORIGIN      
        1 agagcatggt cgtcggcttg acgaagttct ccgccagcga catcgccggc agctcgagcg
       61 gaaagccgcc ggcctgccac acgccgcgct tcacgtcctc ggcgcgggcg cggaaatggg
      121 tgtggcacgg gttgatgtcg ctccacgtgt tgatgatcgc gaccaccggc ttgttcatga
      181 aatcctcgcg ctcgtagccc atctgcagcg tgcgcgagcg gtggccgaac gagcgcaggt
      241 cggacacgcc gaaccagcgg tagcttctca actcctcggg tgtcttgcgc ctggccatca
      301 gcggtcctct ccttgtctcg agcatctctc ggcagtgggt ccggctcgcc ggagaacatg
      361 cgtatcttag aaaagcgttc gcccgatcat cctctaggtg gcgccatcga acatgcgctg
      421 gcgtgcattc tcgatatgcg cttccatggc ggcacgcgcg gcgtcgccgt cgcgcgcctc
      481 gatggcgcga aggatggcga cgtgctcgtc ctggaccagc cgcagccgct cgcgcgtgcg
      541 cagaagcgac aggttgcggg tcagggtcat gccgaaggcg atgtgcggct gcagcgagac
      601 ctggacggcg acgtggtagt gattgtgcgt cgccgaggcg atggcgcgat ggaaatgctc
      661 gtccgcctcg acgccgagcc ggccgctttc gatgcaggcg tcgagatcgg cgagcgccgc
      721 cttgatagcc ccgaggtcgt cgtcctccca gcgcgccgcg gcgagcgccg ccgcggatcc
      781 ctcgaggccg acgcggaact cgaagcagcg ctggatgtcg gcgatcgagc cgaccgggac
      841 gaattgcagc acggcattgt ccggccggcg cctgacgtaa ctgccggagc cctggcgcga
      901 gacgatgatg ccgtcgtcgc ggagccacgc cagcgcttcg cgcacgaccg ggcgcgaggc
      961 accgaagcgc cgcgacagct cggtctcgga gggcaggcgc gaattgacgg ggaactcgcc
     1021 ggcgacgatg cgctcgaaca gctgctcgta gatgccggcg ctgagcttcg cttcggtgcc
     1081 gtcgtccgac ggccgcggtt caacctttgc caggcgcatg tccgtcccgt ttttaacgtc
     1141 ccacctcggc gcgccagcgc tggaattcct cccgcgcttc cggcgccggc gggtaaagcc
     1201 cgaagatcga gcgcccttcg gcaaccttct cgtgaacgaa atcctcgaac acggtctgct
     1261 cgaacgcctc atcggccact tggtcggcaa tctccttcgg gatcacgacc acgccttcgc
     1321 ggtcgccgac gaggatgtct cccggataaa ccggtacgtc gccgcagcca atcggcacgt
     1381 tgaggtcggc ggcatgatgc ttgatcaggt tggtcggagc cgccgcggcc gcatggtagg
     1441 cagggaaggg cagctcggcg aaatccgggg tgtcgcggaa gccgccgtcg gtcacgatcc
     1501 cggcgacgcc gcgcttcatc aggcgggtcc cgaggatgct gccggccgat gccgctgccg
     1561 gatcgcggcg gctgtcgatg acgaacaccg ctccgggcgg gcattcctcg acgcccttgc
     1621 gctgcggatg gctgcggtcc tcgaacacgc cgatatggtc gaggtcctcg cgagccggga
     1681 tgtagcgcat cgtgtaggcc gggccgacca tgcgcggcgc cgccgggttg atcaggtgga
     1741 tgccctggat gaacgtgttg cggaagccgc gcttgaaaag gacggtcgtg atcgtcgcgg
     1801 tcgagaccgc cgccagcttc tttctcgtgc tctcctgcat gaactcgccc tctctaccgc
     1861 cgtgatgacc gcggggatgt gcgcccgtgg aatgaagttg tcaagacttg taaacataaa
     1921 tcacatgcag taagggagcg gtcgcgatcc ggttccccca agtcccaagg agactgcacg
     1981 tgcgtacaag gatgaccgcg ctggccctgg ccatgctcgc gctgacaatc cccggccatg
     2041 cccaggacaa gtggccctcg cggcaggtga cgatcgtcgt cccgttcacc gccggcggca
     2101 ccaccgacat gttcgcccgc atcttcgccc agaagatgca ggagacccac ggcacgccct
     2161 tcatcgtcga gaaccgcgcc ggcgccggcg gcaacctggg cgccgctgcc gtcgccaagg
     2221 ggccgaagga cggctacacg ctgctcgtcg gaaccgtcag cacgcacgcc atcaacccgt
     2281 tcctctacaa gagcaccggc tccgacacgg tgaaggattt ccagccggtc acgctgatcg
     2341 cccgcctgcc gaacctgctg gtggtcaatc cgaagatccc ggccaagacg gtcacggagg
     2401 tcgtcgacta tctccagaag aacccgggta agctcaatta tggctcgtcg ggagccggaa
     2461 cctcgacgca tctcgcgtcg gagctgttcc agatgctcac caagaccaag atgaaccacg
     2521 ttccctaccg cagctccggc gacgtgatga acgcgctcat gggcgggcat atcgacctcg
     2581 ccttcgacaa catgaccctg gcctggccgc aggcgcaaag cgggacgatc cgcgccatcg
     2641 cggtcaccag cacccagcgc agcccgacgg cgccggaggt gccgaccgtc ggcgacaccc
     2701 tgtccggctt cgaggcgacc tcctggcacg gcctgttcgc gccggcggga acgccgcgga
     2761 tgatcgtcga ccagctcgcg gccgaggtga agcgcatctt cgaagagccg gcgacgcaga
     2821 ccaagctgcg cgagatcggc gccgtgccgt cgccgatgac gccggcacag ttcgtcgagt
     2881 ttattgcggc cgaacgcaac aagtggcagc aggtggtcaa ggccgccgga ctggagaacg
     2941 cgcagtaatt tattgcgatc ccagcgcatg atccggcaaa gtgggcgccg ctttgccgag
     3001 aaaggcttgt cccggactcg atccgggatc atgcggcaca aagagaagga g
//
LOCUS       DATAIQ010001123         4357 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_170082, whole genome shotgun sequence.
ACCESSION   DATAIQ010001123 DATAIQ010000000
VERSION     DATAIQ010001123.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4357)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4357)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4357
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_170082"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..952
                     /locus_tag="VHN20_18555"
     CDS             <1..952
                     /locus_tag="VHN20_18555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2727831.1"
                     /translation="NPQRHNHNATIGENILFGVPLGDTFRESNLPSHPFVRAILESEG
                     LTKPLTAMGTAVAQNMIEIFADIPDGHPLFDRFSFFTASERSYFQDLIERKSERRRDA
                     ESSRDRERLIGLALRYSENRHRLGLLDADTEKRLVGAREAFAKLLPLSLQPAIEFYHP
                     DRICAAASVQDNLLFGRIAQDRAGAETEVRALIQRVLTNRGLNHEVFRVGLDSRVDIR
                     GEGLDAREIAAIDLARCLVRRPDVVVVERALDGLPGPVAEDLIKRLRRALIGRGLVIV
                     TASLPPNLDQPPFDSIVRFDNAGARVEDRRSSHTTALEPA"
     gene            1038..1895
                     /locus_tag="VHN20_18560"
     CDS             1038..1895
                     /locus_tag="VHN20_18560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX2727832.1"
                     /translation="MLWKAPARGDALQVRFWGVRGSVCTSGPHFVEFGGHTPCVEIRC
                     GNRLLIIDAGTGLSALGGELGHEAPAEIDILLSHLHLDHIGGLPFFKPALLGNRLIRL
                     YCGNLAGVSAKEPLERIFSEPLFPVSLDQLPCTFDHVGFKAGETLDLDDGLIVRTQPL
                     HHPGGSTGFRVDHRGRSVCYISDIEHTAPWPPPELTRFIKDADLVIYDGMFSEEEYCA
                     CVGWGHSTWQKGIALAQAAGAKALAIFHHHPSHEDDHLRRIEAAVRAEMPTAFLAREG
                     QSVAYAPLD"
     gene            2013..3029
                     /locus_tag="VHN20_18565"
     CDS             2013..3029
                     /locus_tag="VHN20_18565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl transferase"
                     /protein_id="HEX2727833.1"
                     /translation="MTKLLIVALASAVTCAILIVALKPLLVRYALARPNARSSHRIPT
                     PQGGGIAVMAATLAIAAAALSLTAVPVDGAEIAWLSAAAFFLAVTGVVDDIHPLSAMP
                     RLVMQTLAVTVVVTASADARVLPDVVPLWVERSLVVFAGVWFVNLVNFMDGIDWITAA
                     EIVPITAFLALLGTAGVIPPWIALICAALCGAMLGFAPFNRPVAKLFLGDVGSLPIGL
                     LVGWMLLELAARGALAAVILLPLYYLADATITLLRRLVRRERIWEAHRSHFYQVAIDH
                     NGFSVLGVVSHVFLLNLALAALAACTILWPAWSVQLAALLLGIALVGFVLWRFSAPAV
                     RVAA"
     gene            3026..3967
                     /locus_tag="VHN20_18570"
     CDS             3026..3967
                     /locus_tag="VHN20_18570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012634326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HEX2727834.1"
                     /translation="MSAPLIALTGATGFIGRHLLRELPKRGYRMRVLLRRPTMLPSEA
                     SGAVVGDLAAPRNMANALADVDAVIHSAGLAHAMSGLPEDDYRAINTDATIGLARAAA
                     RAGARRFVFLSSIRAQSGPVASSVLTEDLPPEPTDMYGRSKLDAERGLAETAIDWVAL
                     RPVLVYGPGVKGNMAALLRLAQLPLPLPLGSLGGRRSLLSVDNLVDAIDVVLRAPAPL
                     KRPLIVADPEPLTLPEMIAALRAGLGRKPGLVPVPSWLVAQAFRVTGRAEMYHRLAGS
                     LVAEPAELKALGWRPPVPTAAGLEALAREVRQGSSGG"
     gene            complement(3997..>4357)
                     /locus_tag="VHN20_18575"
     CDS             complement(3997..>4357)
                     /locus_tag="VHN20_18575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018181581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2727835.1"
                     /translation="LSGGERARVLLARVLATEAPVMLADEPVAAFDPGYQLRVLDLLT
                     TRARAGAAVVAVMHDLALAARFADRIIALDGGRIVAAGAPRTVLTSSRLAEIFGMEAL
                     ITERDGALVVTPWRAVT"
BASE COUNT          619 a         1596 c         1433 g          709 t
ORIGIN      
        1 caatccgcag cgccacaacc acaatgccac gatcggcgag aacatcctgt tcggcgtgcc
       61 cctcggcgac accttccgcg aaagcaatct gccctcgcac cccttcgtcc gcgccatcct
      121 cgagtcggaa gggctgacca agccgctgac cgctatggga acggcggtcg cgcagaacat
      181 gatcgagata tttgccgaca tccccgacgg gcatccgctg ttcgaccgct tctccttctt
      241 cactgcgtcg gagcggagct atttccagga tctcatcgag cgcaaaagcg aacggcgccg
      301 cgatgccgag agctcacgcg accgcgagcg cctgatcggc ctcgcgcttc gctacagcga
      361 gaaccgccac cgcctcggcc tcctcgacgc cgatacggaa aaacgcctcg tcggggcgcg
      421 cgaggcattc gccaagctgc tgcccctgag cctgcagccg gccatcgagt tctaccaccc
      481 cgaccggatc tgcgcggcgg ccagcgtcca ggacaatctg ctgttcgggc gcatcgccca
      541 agaccgggcc ggcgccgaga ccgaggtgcg ggcattgatt cagagggtgc tgaccaaccg
      601 cggcctgaac cacgaggtgt tccgggtcgg gctcgactcg cgggtcgaca tccgcggcga
      661 agggctcgac gcccgcgaga tcgccgccat cgacctggcg cgctgtctcg tccggcgccc
      721 ggacgtcgtc gtcgtggagc gcgccctcga cggattgcct ggccctgtcg ccgaggacct
      781 gatcaagcgc ctgcggcggg cgctgatcgg gcgcgggctc gtgatcgtca ccgcctccct
      841 gccgcccaac ctcgaccagc cgcccttcga cagcatcgtg cgcttcgaca atgccggcgc
      901 ccgggtcgag gaccgccgct ccagccacac cacggccctg gagcccgcat gaacccggta
      961 tttgagcaca gccgggccgc ccgcggtgtg cgctggcgca cagccaggcc gttttaagcg
     1021 ggtccacaag cagcatgatg ttgtggaaag ctcccgcgcg aggggacgcg ctccaggtgc
     1081 gcttctgggg cgtgaggggc tccgtttgca cgtccggtcc gcatttcgtg gagttcggtg
     1141 ggcatacccc ctgcgtggag atccgctgcg gaaaccgcct tctcatcatc gacgctggca
     1201 ccggcctgtc ggccctcggc ggtgaactcg gccatgaggc gccggccgag atcgacatcc
     1261 tcctgagcca cctgcatctc gatcacatcg gtggcctgcc cttcttcaag ccggcgctcc
     1321 tcggcaaccg actgatccgc ctgtattgcg gcaacctcgc cggggtcagc gccaaagagc
     1381 cgctcgagcg catcttctcg gagccgctgt ttccggtcag cctcgaccag ctcccctgca
     1441 cgttcgacca tgtcggcttc aaggcgggcg agaccctcga cctggacgac ggcctcatcg
     1501 tccggaccca gcccctgcac cacccaggcg gctcgaccgg gttccgcgtc gatcatcgcg
     1561 ggcgaagcgt ctgctacatc agcgacatcg agcataccgc gccgtggccg ccgcccgagc
     1621 tcacgcgctt catcaaggac gcggatctgg tcatttacga cggcatgttc tcggaagagg
     1681 aatactgcgc ctgcgtcgga tggggacatt ccacctggca gaagggaatc gccctggcgc
     1741 aggcggcggg cgcgaaagcg ctggccatct tccatcatca tccttcgcac gaggacgatc
     1801 acctgcgccg gatcgaagcc gccgtgaggg ccgagatgcc gacggccttc cttgcccgcg
     1861 aaggccagtc cgtggcctac gcgccgctcg actgagccgc cgtcgcatct ttcgacaccg
     1921 gatcgatcgg ggaactgccc cccagtcatg ctcccgcgac ttcccttcat gcgggcagag
     1981 gcggtaaagg tccgactcgc gcctcgcatg tcatgaccaa gctcctcatc gtcgccctcg
     2041 catccgcggt gacctgcgcc atcctgatcg tggcgttgaa gccgctgctc gtgcgctacg
     2101 cgctggcgcg cccgaatgcg cgctcgtcgc accgcatccc gaccccgcaa ggcgggggca
     2161 tcgccgtgat ggcggcgacg ttggcgatcg cggccgcggc cttgagcctc acggcggtgc
     2221 cggtggatgg cgccgagatc gcgtggctca gcgccgccgc gttcttcctc gccgtcaccg
     2281 gcgtggtcga cgacatccat ccgctctcgg caatgccgcg ccttgtcatg cagaccctgg
     2341 cggtgacggt ggtcgtcacg gcgagcgcgg acgcccgcgt cctgcccgat gtcgtcccgc
     2401 tctgggtcga gcgcagcctc gtcgtgttcg ccggggtttg gttcgtcaac ctcgtcaact
     2461 tcatggacgg gatcgactgg atcaccgcgg ccgagatcgt gccgatcacg gcgttcctcg
     2521 ccttgctcgg gaccgccggc gtgatacccc catggatcgc gttgatctgc gcggcgctgt
     2581 gcggcgccat gctcggcttt gcgccgttca acaggcccgt ggccaagctc tttctcggcg
     2641 acgtcggctc cctgccgatc gggcttctgg tcggctggat gctgctcgag ctcgcggccc
     2701 gcggcgccct tgcagccgtg atcctgcttc cgctctacta cctcgccgac gcgacgatca
     2761 cgctgctgcg ccggctcgtc cgccgcgagc ggatctggga agcccaccgc agccatttct
     2821 accaagtggc catcgaccac aacggcttct cggtgctcgg cgtggtgagc cacgtgttcc
     2881 tcctgaacct cgccctggcg gcgctcgcgg cgtgcacgat cctgtggccg gcctggtcgg
     2941 tccagctcgc cgcgctgctg ctcggcatcg cgctagtcgg attcgtgctc tggcgcttca
     3001 gcgcgccggc cgtgcgggtc gctgcatgag cgcgccgctg atcgcgctga ccggcgcaac
     3061 cggattcatc ggccgccacc tgctgcgcga gctgcccaag cgcggctacc gcatgcgcgt
     3121 gctgctgcgc cggccgacga tgctgccgtc ggaagcgagc ggagcggtgg tcggcgatct
     3181 cgcggcgccg cgcaacatgg cgaatgcgct cgccgacgtc gacgcggtga ttcattccgc
     3241 cgggctcgcg cacgccatgt ccggcctgcc cgaagacgat taccgggcca tcaacaccga
     3301 tgcgacgatc gggctggcgc gcgcggcggc gcgtgccggc gcccgtcgct tcgtctttct
     3361 gtcgtcgatc cgcgcccagt cgggccccgt cgcgagttcc gtcctcacgg aagacctgcc
     3421 gccagagccg accgacatgt acgggcgctc caagctcgat gcggagcgcg gcctcgctga
     3481 gacggcgatc gactgggtcg cgctgcggcc cgtgctcgtc tacgggccgg gcgtgaaggg
     3541 caacatggcg gcgctgctca ggctcgcgca actgccgctg ccgctgccgc tcggcagtct
     3601 tggcggccgg cgctcgctgc tctcggtcga caatctcgtc gacgccatcg acgtggtcct
     3661 gcgcgctccg gcgccgctga agcgtccgct gatcgtcgcc gatccggagc cgctcacgct
     3721 gcccgagatg atcgccgcgt tgcgcgcggg gctcgggcgg aagccgggac tcgtgcccgt
     3781 ccccagctgg ctcgtcgcac aagccttccg cgtcaccggg cgcgcggaga tgtaccaccg
     3841 cctggccggc tcgctggtcg ccgaaccggc ggagctcaag gcgctcggct ggcgtcctcc
     3901 cgtgccgacc gccgccggcc tcgaggcgct cgcgcgcgaa gtccgacagg gcagcagcgg
     3961 cggctgagtt cctctccacg cttgccggga gagaggtcag gtcactgcgc gccagggcgt
     4021 gacgacgagg gcgccgtcgc gctcggtgat cagcgcttcc atgccgaaaa tttccgcgag
     4081 acggctggag gtcagcaccg tccgcggcgc tccggcggcg acgatgcgac cgccgtccag
     4141 cgcgatgatg cggtcggcaa aacgtgccgc gagcgccaga tcgtgcatga cggcgacgac
     4201 ggccgctccg gcacgcgcgc gcgtcgtcaa aagatcgagc acgcgcagct gatagccggg
     4261 atcgaaggcg gcgaccggct cgtcggcaag catgaccggc gcttccgtcg cgagcacgcg
     4321 cgccagcagc acgcgcgcgc gctcgccgcc ggagagc
//
LOCUS       DATAIQ010001124         1593 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_229551, whole genome shotgun sequence.
ACCESSION   DATAIQ010001124 DATAIQ010000000
VERSION     DATAIQ010001124.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1593)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1593)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1593
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_229551"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..199
                     /locus_tag="VHN20_18580"
     CDS             <1..199
                     /locus_tag="VHN20_18580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006205341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019346 - transsulfuration [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="PLP-dependent transferase"
                     /protein_id="HEX2727836.1"
                     /translation="RCRLFTLAESLGGVESLIEHPAIMTHASVPPEVRASLGIDDGLV
                     RLSVGIEDADDLIADLRSALE"
     gene            210..1451
                     /locus_tag="VHN20_18585"
     CDS             210..1451
                     /locus_tag="VHN20_18585"
                     /EC_number="5.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018259773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008973 - phosphopentomutase activity
                     [Evidence IEA];
                     GO_process: GO:0009117 - nucleotide metabolic process
                     [Evidence IEA];
                     GO_process: GO:0043094 - cellular metabolic compound
                     salvage [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopentomutase"
                     /protein_id="HEX2727837.1"
                     /translation="MPRALLIVLDSVGIGGAEDAAAYGDAGADTLGHIAEACARGEGD
                     RAGLRQGALHLPNLATLGIGLAAAASTGRIPPNLAPDGGVTAAWGYGVETSKGKDTPS
                     GHWEIAGVPVAFDWGYFPDARPAFPPALTETLIREATLPGILGSRHASGTAIIDELGA
                     EHMITGKPICYTSVDSVFQIAAHEQRFGLERLYQVCRIARRLCDPLKIGRVIARPFVG
                     SVAAGFTRTGNRKDFAIPPPAETLLDELAKAGRPVVSVGKIGDIFAHRGTGTELKPHG
                     NDACLSAALDALRALPDGGLVFANLVDFDTEWGHRRDVPGYAAALEAFDRRVPEVRAA
                     LGNGDLAVITADHGNDPTWRGTDHTREHTPILAFGAAVVPGPIGRRGTFADIGASVAA
                     HLGVTTAAGRSFLSSSSMGQR"
BASE COUNT          227 a          563 c          557 g          246 t
ORIGIN      
        1 gcgctgccgc ctcttcacgc tcgccgagag cctcggcggc gtcgagagtc tgatcgagca
       61 tcccgccatc atgacgcatg cctcggtgcc gcccgaggtg cgggcgtcgc tgggcatcga
      121 cgatggcctc gtgcgcctgt cggtcggcat cgaggatgcc gacgatctga ttgccgacct
      181 caggagcgcg ctggagtgac ggagggctta tgccgcgggc gctgctgatc gtgctcgact
      241 cggtcggcat cggcggcgcc gaggacgcgg ccgcctatgg cgacgccggc gccgacacgc
      301 tcggacatat cgccgaggcg tgcgcgcgcg gggagggcga tcgtgccggc ctgcgccagg
      361 gcgcgctgca tctgcccaac ctggccacgc tcggcatcgg gctggccgct gcggcttcga
      421 ccgggcggat accgccgaac ctcgcccccg atggcggcgt caccgcggcg tggggatacg
      481 gcgtcgagac ctcgaagggc aaagatacgc catcggggca ctgggagatc gccggcgtgc
      541 ccgtcgcttt cgactggggc tattttccgg acgcgcggcc tgcctttccc cccgcattga
      601 ccgagacgct gatccgcgaa gcaacgctcc cgggcattct cggcagccgg catgcgtcgg
      661 gcacggcgat catcgacgag ctcggcgccg agcacatgat caccgggaag ccgatctgct
      721 acacgtcggt cgacagcgtg ttccagatcg ccgcgcacga gcaaaggttc gggctcgagc
      781 gcctctatca ggtttgccgc atcgcgcgcc gcctttgcga tccgctcaag atcggccggg
      841 tgatcgcacg gccgttcgtg gggtcagtcg cagccggctt cacgcgcacc ggcaaccgca
      901 aggatttcgc gattccgccg cctgcggaga cgctcctcga tgagctcgcc aaggccgggc
      961 gcccggtcgt gagcgtcggc aagatcggcg atattttcgc acaccgcggc accggcaccg
     1021 agctcaagcc gcacggcaac gacgcctgcc tgtccgctgc gctcgacgcc ttgcgcgcgc
     1081 tgccggacgg cggcctggtt ttcgcgaacc tggtcgactt cgacacggaa tggggacatc
     1141 ggcgcgacgt gccgggctac gctgcggcgc tcgaggcgtt cgaccggcgg gtgcccgagg
     1201 tgcgtgccgc gcttggcaat ggcgatcttg ccgtcatcac cgccgaccat ggcaacgacc
     1261 ccacgtggcg cgggaccgat cacacgcgcg agcacacgcc gatcctcgct ttcggcgcgg
     1321 ccgtcgtccc cgggccgatc ggtcgacggg gcacgttcgc cgacatcggg gccagcgtcg
     1381 ccgcgcatct cggtgtaacg acggcggcgg gccggtcctt cctgagttcc agctccatgg
     1441 gtcagcgctg acagcctgat gacggcggca caaggctcgg ggccgggttg acctggccga
     1501 agctcccggc cgcagcgcac ggcgcatcat ggccgcgccg gaccgcaccc tcgatgtcgg
     1561 cccgtacgat gccgatgtca cgcagcatgt agt
//
LOCUS       DATAIQ010001125         1680 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_170176, whole genome shotgun sequence.
ACCESSION   DATAIQ010001125 DATAIQ010000000
VERSION     DATAIQ010001125.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1680)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1680)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1680
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_170176"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1273
                     /locus_tag="VHN20_18590"
     CDS             <1..1273
                     /locus_tag="VHN20_18590"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX2727838.1"
                     /translation="QTAGGRRKRIIVYTAGAILLAAGGYAAWRYADRQTTVEVPVAKA
                     RRGDFIISVKTRGEIRSVNSVILTAPQVPDARIVKLAESGKPIRKGDIVVEFDAAQQE
                     QLLLERNTSVRTVDSEILQTRASHRIVDEQDGMNMMTADYNLQRAKLDASKAEVVSQI
                     EGAKSRIDVGISQGELNQVKTVIGAHQTTQEADLDRLKQRKEKTVRDVNRAKGYLSKM
                     VLRAPNDGMVNILPNFRAQGSFGSTPPPFKEGDRTWTGAPIAEIPDLSNMRIDLKLDE
                     VDRGKLQMGQPIKVRIDAISDRELDAELDWISPIAAIMYKGFGLSEKTFPARATLKAL
                     DQRLRPGMSASAEVIIERNADVLLIPVRASFMHHGKPAVYVQKGQQFELRPIEVGKRN
                     DTDMIVLKGLRAGEQVALENPIEAAKKARKL"
     gene            1278..>1680
                     /locus_tag="VHN20_18595"
     CDS             1278..>1680
                     /locus_tag="VHN20_18595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727839.1"
                     /translation="MTRLLIRVAIAAILGIAVWGGYKAYSAMPQNQRHIATTKVRRND
                     VVVRSYARGELRAVRSATLVAPNLFSTVQVTQIAPLGAFAREKDLIVEFDDSELHSRL
                     EEKQLEIEQVSEQIKKAQADLAIRNNQDQVEL"
BASE COUNT          346 a          548 c          534 g          252 t
ORIGIN      
        1 ccagacggcg ggaggacgcc gcaagcgcat catcgtctac acggcgggcg ccatcctgct
       61 cgccgccgga ggctacgccg cgtggcgcta tgccgaccgc cagaccaccg tagaggttcc
      121 agtcgccaag gcccggcgcg gcgacttcat catcagcgtc aagacgcggg gcgagatccg
      181 cagcgtcaat tccgtcattc tcacggctcc gcaggttccc gacgcgcgca tcgtcaagct
      241 cgccgagtcg ggtaagccga tccgcaaggg cgacatcgtc gtcgagttcg atgcggcgca
      301 gcaggagcag ttgctgctcg agcgcaacac cagcgtccgc accgtggata gcgagattct
      361 gcagacccgc gcctcgcacc gcatcgtcga cgagcaggac ggcatgaaca tgatgacggc
      421 cgactacaac ctgcagcgcg ccaagctcga tgccagcaag gcggaagtcg tctcacagat
      481 cgagggtgcc aaaagccgaa ttgacgtcgg catctcgcag ggcgagctga accaggtcaa
      541 aaccgtcatc ggcgcgcacc agaccacgca ggaagccgac ttggatcgcc tgaaacagcg
      601 gaaggagaag acggtccgcg acgtgaatcg cgccaagggc tacctctcga aaatggtgct
      661 ccgcgccccg aatgacggca tggtgaacat cctccccaac ttccgcgctc agggctcgtt
      721 cggatcgacg ccgccgcctt tcaaggaagg cgaccgcacc tggaccggcg ctcccatcgc
      781 cgagattccg gacctctcga acatgcgcat cgatctcaag ctcgatgagg tcgaccgcgg
      841 caagctgcag atgggccagc cgatcaaagt gcgcatcgac gcgatctcgg accgtgagct
      901 cgacgccgag ctcgactgga tcagtccgat tgccgccatc atgtacaaag gcttcggcct
      961 gtcggagaag acgttccctg cccgggcgac gctcaaggct ctcgatcagc gcctccgtcc
     1021 gggaatgagc gcgtcggccg aggtcattat cgagcgcaat gccgacgtgc tgctgatccc
     1081 ggtacgcgcg agcttcatgc atcacggcaa gccggccgtc tatgtgcaga agggacagca
     1141 gttcgagctg cgtccgatcg aggtcggcaa gcgcaatgac acggacatga tcgtgctcaa
     1201 gggtctgcgc gccggcgagc aggtcgcgct cgagaatccc atcgaagccg ccaagaaagc
     1261 gagaaagctg taatccgatg accaggctcc tcatccgcgt tgcgatcgcg gcgatcctcg
     1321 gtatcgccgt ctggggcggc tacaaggcgt attcggcgat gccgcagaac cagcgccaca
     1381 ttgcgaccac caaggtccgg cgcaacgacg tggtggtccg cagctacgcg cgcggcgagc
     1441 tgcgcgccgt ccgttcggcg acgctggtcg cgcccaacct gttcagcacg gtgcaggtga
     1501 cgcagatcgc tccgctcggc gccttcgcgc gggagaagga tctgatcgtc gagttcgatg
     1561 actccgagct gcactcgcgg ctcgaagaga agcagctcga gatcgagcag gtgagcgagc
     1621 agatcaagaa ggcgcaggcc gatctggcga tccggaacaa ccaggaccag gtcgagctgt
//
LOCUS       DATAIQ010001126         2132 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_273627, whole genome shotgun sequence.
ACCESSION   DATAIQ010001126 DATAIQ010000000
VERSION     DATAIQ010001126.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2132)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2132)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2132
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_273627"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..493
                     /locus_tag="VHN20_18600"
     CDS             <1..493
                     /locus_tag="VHN20_18600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012322003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019346 - transsulfuration [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="PLP-dependent transferase"
                     /protein_id="HEX2727840.1"
                     /translation="ADAFWERISAVRRSQGAILGPFEAYLTLRGMRTLPLRAAAQARS
                     ALTLAERLAAHPHVARVLYPGLPQHPGHDVAARQMEGGFGYMLSVQVTGGEAGAIATA
                     ANVRLWKRATSLGGVESLIEHRASVEGPDTPCPRDLLRLSTGIEDVDDLTADLDAALR
                     AAH"
     gene            complement(506..>2132)
                     /locus_tag="VHN20_18605"
     CDS             complement(506..>2132)
                     /locus_tag="VHN20_18605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019904922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="protein meaA"
                     /protein_id="HEX2727841.1"
                     /translation="TQNDIIKEYLSRGTYVFPPAPSLRLTSDVILFTTAEMPKWNPVN
                     VCSYHLQEAGATPVQELAFALATAQTVLDTVRAAGVVGATFSDVVGRISFFVNAGLRF
                     VTEMCKMRAFAELWDEITRERYGIVDAKKRVFRYGVQVNSLGLTEQQPENNVHRILLE
                     MLAVTLSRKARARAVQLPAWNEALGLPRPWDQQWSLRMQQILAYETDLLDYGDIFDGS
                     RVVESKVDVLKDAARAELARIDALGGAVAGVESGYLKRALVEANARRLAAIEAGEQVV
                     VGVNRFVEGEPSPLTAGEGAVLTVPETVEMEAAHRIRAWRAERDRKAADAALDDLETA
                     AREGRNIMPASIACAKAGVTTGEWGELLRQVFGEYRAPTGVGPDTATAGAAPDIRIMV
                     ADLGQKLGETPRLVVGKPGLDGHSNGAEQIALRARDVGMAVTYDGIRQTPAEIVAKAR
                     ETGAHVIGLSILSGSHVPLVREMMAQLRIGGLDHIPVVVGGIISGEDALVLNNLGVAA
                     VYTPKNYALDTIMADIVRVVERSIARRAESSPA"
BASE COUNT          306 a          738 c          743 g          345 t
ORIGIN      
        1 ggccgatgcg ttctgggagc gcatctccgc ggttcgccgg tcgcagggcg ccatcctggg
       61 gccgttcgaa gcctacctca ccctgcgcgg catgcgcacc ttgccgctgc gcgccgcggc
      121 gcaggccaga agcgccttga ccctggccga gcggctcgcg gcgcatccgc atgtggcgcg
      181 cgtgctctat ccgggcctgc cgcagcatcc gggccacgac gtcgcggcgc ggcagatgga
      241 gggcggtttc ggctacatgc tctcggttca agtcacgggc ggcgaagccg gcgccatcgc
      301 cacggcggcg aatgtccgcc tgtggaagcg cgcgacctcg ctgggcggcg tcgaaagcct
      361 gatcgagcac cgcgcctcag tcgaaggccc cgacacgccg tgcccgcggg acctcctccg
      421 cctctcgaca ggcatcgagg atgtcgacga cctcaccgcc gacctcgatg cggccctgcg
      481 ggcggcgcat tgatgacaaa ggtattcatg ccgggctgct ttcagctcgc cgtgcgatcg
      541 accgctccac cacgcgcacg atgtcggcca tgatcgtgtc cagggcatag ttcttgggcg
      601 tgtagacggc ggcgacgccg aggttgttga ggacgagcgc gtcctcgccc gagatgatgc
      661 cgccgaccac gaccgggatg tggtcgagcc cgccgatgcg caactgcgcc atcatttcgc
      721 gcacgagagg gacgtgcgat cccgacagga tcgacaggcc gatcacatga gcgccggtct
      781 cgcgcgcctt ggcgacgatc tccgcggggg tctggcgaat gccgtcatag gtcaccgcca
      841 tgccgacgtc gcgggcgcgc agggcgattt gctcggcgcc gttggaatgg ccgtcgagcc
      901 ccggcttgcc gacgacgaga cgcggcgtct cgccgagctt ctggccgaga tcggcgacca
      961 tgatgcggat gtccggtgcc gcgccggcgg tcgcggtgtc ggggccgacg ccggtcgggg
     1021 cgcggtattc gccgaacacc tggcgcagca actcgcccca ctcgccggtg gtcacgccgg
     1081 ctttggcgca ggcgatcgag gcgggcatga tgttgcggcc ctcgcgcgcc gccgtctcga
     1141 ggtcgtccag cgcggcgtcg gcggccttgc ggtcgcgctc cgcgcgccag gcgcggatcc
     1201 tgtgcgccgc ttccatctcc accgtctcgg gaacggtcag gacggcgcct tcgcccgcgg
     1261 tgagcgggga gggctcgccc tcgacgaaac ggttgacgcc gaccacgacc tgctcacccg
     1321 cctcgatcgc cgccaggcgt ctcgcgttcg cttccacgag cgcgcgcttg agatagccgg
     1381 attcgacccc cgccacggcg cccccgaggg cgtcgatgcg cgcgagctcg gcgcgcgctg
     1441 catccttcag cacatcgacc ttgctctcga caacgcgtga tccgtcgaag atgtcgccat
     1501 agtcgagcag gtcggtctcg taggccagga tctgctgcat gcgcagcgac cattgctggt
     1561 cccacggccg cggcaggccg agcgcctcgt tccatgccgg cagctgcacg gcgcgggcgc
     1621 gcgccttgcg cgacagcgtg acggcgagca tctcgagcag gatgcggtgg acgttgttct
     1681 ccggctgctg ctcggtcagg ccgagcgagt tgacctgcac gccgtagcgg aaaacgcgct
     1741 tcttcgcgtc tacgatgccg tagcgctcgc gcgtgatctc gtcccacaat tcggcgaagg
     1801 cgcgcatctt gcacatctcg gtgacgaagc gcagccctgc attgacgaag aacgagatgc
     1861 gcccgaccac gtcggagaag gtcgcgccga cgacgccggc ggcgcgcacc gtgtcgagca
     1921 cggtctgcgc ggtcgcgagg gcgaaagcga gctcctggac cggcgtcgcg ccggcttcct
     1981 gcaggtgata ggagcagacg ttgaccgggt tccatttcgg catttcggcc gtcgtgaaca
     2041 ggatcacgtc actggtcagc cgcaggctcg gcgctggcgg gaagacgtag gtcccgcgtg
     2101 acagatattc cttgatgatg tcgttctgcg tc
//
LOCUS       DATAIQ010001127         1623 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_367444, whole genome shotgun sequence.
ACCESSION   DATAIQ010001127 DATAIQ010000000
VERSION     DATAIQ010001127.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1623)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1623)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1623
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_367444"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..394
                     /locus_tag="VHN20_18610"
     CDS             <1..394
                     /locus_tag="VHN20_18610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HEX2727842.1"
                     /translation="HPEFFDAVVLDGDERVLEIQVKRQGAASHWIWGAFKMPGRVLEE
                     LRALWVERRCHDEYIGTLVNAYLAAGGDAIGVKAGHAYVDVGTLHGYREAIVLLSEAA
                     ERSGEGAAGARVALGWPGGRAFHDASRQ"
     gene            404..1186
                     /locus_tag="VHN20_18615"
     CDS             404..1186
                     /locus_tag="VHN20_18615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018322031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR04290 family methyltransferase"
                     /protein_id="HEX2727843.1"
                     /translation="MNAIDPVVKDDIRRRAEALGPWFHNIELNGVWTAPNHFLGDYPA
                     VKWRSFANAIPQDLTGKSVLDIGCNGGFYSIEMKKRGAQRVLGIDFDDEYLAQARFAA
                     EVTRLDIEFRKLSVYDVGALGERFDAVLFMGVLYHLRHPLLALDLIHEHVAKDLFVFQ
                     SMQRGSSEVEEVPENPTFWQTGQFDEPGYPKLHFIEKRYADDPTNWWVPNRACAEAML
                     RSAGFDIVEHPEDEVYVCRRGAAPEWGGSVYPARNPSQRRSA"
     gene            1183..>1623
                     /locus_tag="VHN20_18620"
     CDS             1183..>1623
                     /locus_tag="VHN20_18620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011925149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-xylosidase"
                     /protein_id="HEX2727844.1"
                     /translation="MIEAAMIWNEPNNKSHWDPEIDPGWGLFADTAICAARAIAAENA
                     NLPRVLGGISPIDPAFIRNMADRGVLDHIDVVAVHGFPLDWNLWQIHEWPAKIDEIAA
                     VTDLPIWVTEVGISTFGAEEVQAWGLKRTAELLIGKAPRIHWYSL"
BASE COUNT          288 a          509 c          542 g          284 t
ORIGIN      
        1 gcacccggaa tttttcgatg ccgtggtgtt ggacggggac gagcgggtgc tggagatcca
       61 ggtgaagcgg cagggggcgg cttcgcactg gatctggggc gccttcaaga tgccgggccg
      121 cgtcctcgag gaactgcgcg cgctttgggt cgagcgtcgt tgccacgacg aatatatcgg
      181 cacgcttgtc aatgcctatc tcgcggcagg tggcgacgcg atcggcgtca aagccgggca
      241 cgcctatgtc gatgtcggca ccttgcacgg ctaccgggaa gccatcgtgc tcctcagcga
      301 ggccgccgag aggagcggcg agggcgccgc cggcgcgcgc gtggcgctcg ggtggcccgg
      361 cggccgtgcc ttccatgatg cgagcagaca ataggcttca cccatgaatg caatcgaccc
      421 tgtcgtgaag gatgatatcc gccggcgcgc cgaagccctt ggaccgtggt ttcacaacat
      481 cgagctgaac ggcgtctgga cggccccaaa ccacttcctc ggcgattacc ccgcggtgaa
      541 gtggcggagc ttcgcgaatg cgatcccgca ggatctgacc ggcaagagcg tgctcgatat
      601 cggctgcaac ggcggcttct actcgatcga gatgaagaaa cgcggtgccc aacgcgtgct
      661 cgggatcgac ttcgacgatg aatacctggc gcaggcgcgc ttcgccgccg aggtgacaag
      721 gctcgacatc gagtttcgca agctttccgt ctacgacgtc ggcgcgctcg gcgagcgctt
      781 cgacgccgtg cttttcatgg gcgtcctcta ccacctgcgc catccgctgc tggcgctcga
      841 cctgattcac gaacatgtcg cgaaggacct gttcgttttt cagtcgatgc agaggggctc
      901 gagcgaggtc gaggaggtcc cggagaatcc gaccttctgg cagacggggc agttcgacga
      961 gcccggatac ccgaagctgc atttcatcga aaagcgctac gccgacgatc cgacgaactg
     1021 gtgggtgccg aaccgcgcct gcgccgaagc catgctgcgc agcgccggct tcgacatcgt
     1081 cgagcacccg gaggatgagg tctatgtgtg ccggcgcggg gcggcgccgg aatggggcgg
     1141 ctccgtctac cccgccagga acccgtcgca gcggagaagc gcatgatcga agccgcaatg
     1201 atctggaacg agcccaataa caagtcgcac tgggatccgg aaatcgatcc cggctggggc
     1261 ctgttcgccg acaccgcgat ctgcgcggcc cgggccatcg ccgcggagaa tgccaatctg
     1321 ccgcgcgtgc tcggggggat ttcgccgatc gatccggcct tcatccgcaa catggccgat
     1381 cgcggcgtgc tggatcacat cgacgtcgtc gctgtgcatg gcttcccgct cgactggaat
     1441 ctttggcaga tccatgaatg gcccgccaag atcgacgaga tagccgccgt cacggacctg
     1501 ccgatctggg ttaccgaggt cggcatctcg accttcggcg ccgaggaggt tcaggcctgg
     1561 ggcctcaagc ggacggccga gctgctcatc ggcaaggcgc cgcgcattca ttggtacagc
     1621 ctt
//
LOCUS       DATAIQ010001128         3081 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_170341, whole genome shotgun sequence.
ACCESSION   DATAIQ010001128 DATAIQ010000000
VERSION     DATAIQ010001128.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3081)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3081)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3081
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_170341"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2082
                     /locus_tag="VHN20_18625"
     CDS             <1..2082
                     /locus_tag="VHN20_18625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727845.1"
                     /translation="IDVRKALRLWPDAVAAPVKRFLVDNLRAGSVDDLRIAVAMSARE
                     LSDALASRPVADKAVAVAFAIRDAELAVAEGLPPVSQGYVEGRVTGATASVRAPRGRV
                     QMPDGRALAFSEGSFTMSDFWARNSVAQIGFRLQGGADALGSLLRMPGAHAIAALDLD
                     PSGMKGRADLRVSLPLPIRDIPDFGDLPLAISGTVNDLAIERVFADEKLEGANLTFAL
                     NSGALNLRGDGRLGGTPVVLEARQSRGVPGELAVLLTLDEAARARRGLSMGSQLTGPV
                     GVRIAVPLTKSGTGPRVEVDLVKAGIDNLIPGWTKPAGKPGRLTFVLDQEVATEIRDF
                     AVDSGVVQIRGSASMNSEGSFEKADISTLKLSPGDDMRAQIERAGGVYRATLRGSVMD
                     ARPFIKSLTAAPQSGGSGSSGREQRSEQRDVDLDVAANIITGFNDETLTNGSLKVATR
                     ARDLRHLQLTGRFRSAQVSAQLTRRERTPVVLLQSDDAGATLRFVDLYRRMVGGRLVF
                     EVSVGDAPQYGNVAIDSFALRNEPALRRIIPQQPVAGTTEERGNAVAAINPNDVQFTK
                     LEADFMRTASRLEFRDAVMWGMNVGFTLGGWIDYGRDKTDISGTFIPVFGLNNVFSQV
                     PLVGPILGGSRNEGLLAINFRVSGPASSPTLTVNPLSLVAPGFLRKLFGVGSSDATAT
                     IPPVGSQRWER"
     gene            complement(2141..>3081)
                     /gene="tyrS"
                     /locus_tag="VHN20_18630"
     CDS             complement(2141..>3081)
                     /gene="tyrS"
                     /locus_tag="VHN20_18630"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015928551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004831 - tyrosine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006437 - tyrosyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HEX2727846.1"
                     /translation="GTFSRFIQFGAGRTDALMVDNAEWLTKLNYIEFLRDVGRHFSVN
                     RMLSFDSVRLRLERDQELSFLEFNYMILQAYDFVELFRRHGCMLQMGGSDQWGNIVNG
                     IDLGRRLGTEQLYALTCPLITTASGAKMGKTAAGAVWLNADLLSPYDYWQFWRNTEDA
                     DVGRFLKLFTLLPLDEIARLERLSGAEINEAKKVLATEATALLHGRDAAELAAETARK
                     TFEQGTLAESLPTIEMPRGVLEAGLGVLTAFGPEYARLVPSTSEARRQIKSGGLRVND
                     QPVTDERAMLRASDLTPEGVIKLSFGKKRHVLLRTI"
BASE COUNT          488 a         1046 c         1030 g          517 t
ORIGIN      
        1 atcgacgtgc gcaaggcgtt gcggctttgg ccggacgcgg tcgccgcgcc ggtcaaacga
       61 tttctcgtcg acaatcttcg cgccggttcc gtcgacgacc tgcgtatcgc cgtcgcgatg
      121 tcggcacgcg agctttcgga cgcgctcgcc agccggcctg tcgccgacaa ggcggtggcg
      181 gtcgccttcg cgattcgcga cgccgaactg gccgttgcgg agggcctgcc tcctgtctcg
      241 caaggatacg tggagggacg tgtcacgggc gccacggcgt ccgtgcgtgc gcccaggggc
      301 cgcgtgcaga tgcccgacgg gcgggctctc gcgttcagcg agggttcgtt cacgatgtca
      361 gacttctggg cgcggaattc cgtcgcgcag atcggctttc ggctgcaggg cggcgccgat
      421 gccctcgggt ccctgctcag gatgccgggc gcgcatgcca ttgccgcgct cgacctcgat
      481 ccatcgggca tgaaaggccg cgccgacctg cgcgtgagcc tgccgttgcc gatcagggat
      541 attccggatt tcggcgatct gccgctggcc atctcgggga cggtgaacga cctcgccatc
      601 gagagggtct ttgccgatga gaagctcgag ggcgccaacc tgaccttcgc gttgaattcc
      661 ggcgccctca atctgcgcgg tgacggacgc ctcggcggaa cgcccgtcgt gctcgaagct
      721 cgtcaatcac gcggcgtgcc gggtgagctc gccgtgctgc tcaccctgga cgaggcggcc
      781 cgcgcgcgcc gcggcctctc aatgggctcg cagctgaccg ggcctgtggg cgtccgcatc
      841 gccgtgccgc tcaccaaatc cggcaccggg ccccgggtgg aggtcgatct cgtcaaggcg
      901 gggatcgaca acctgatccc cggctggacc aagccggccg gcaagccggg ccggctgacg
      961 ttcgttctcg accaggaggt cgctaccgag atccgcgatt ttgcggtcga tagcggcgtc
     1021 gtgcagatcc gcggctccgc atcgatgaac tccgaagggt cattcgagaa ggcggatatc
     1081 tccacgctca agctgtcgcc cggcgatgac atgcgcgccc agatcgagcg cgcgggcggc
     1141 gtctatcggg cgacgctgcg cggcagcgtg atggacgcgc ggccgttcat caagtcgctc
     1201 accgcagccc cgcaatcggg cggttccggc agcagcgggc gcgagcaacg cagtgagcag
     1261 cgcgacgtcg acctcgacgt cgccgccaac atcatcaccg gcttcaacga cgagacattg
     1321 accaacggct cgctcaaggt cgccacccgg gcgcgcgact tgcggcacct gcagctcacc
     1381 ggccgcttcc ggtcggcgca ggtgtcggcg cagctcaccc gtcgcgagcg cacgccggtg
     1441 gtcctgcttc agtccgacga cgccggcgcc acgctccgct tcgtcgacct ttatcggcgg
     1501 atggtcggcg ggcggctggt cttcgaggtg tcggtcgggg acgcgccgca atacggcaac
     1561 gtcgcaatcg acagctttgc cttgcgcaac gagccggccc tgcggcgcat catcccgcaa
     1621 cagcccgtgg cggggacgac ggaggagcgc ggcaacgcgg tcgcggcgat caatccgaac
     1681 gacgtgcagt tcaccaagct cgaagccgac ttcatgcgca ccgcgagccg gctcgaattc
     1741 cgcgacgcgg tgatgtgggg gatgaatgtc ggtttcacgc tcggcggctg gatcgactac
     1801 ggtcgcgaca agaccgacat ctccggaacc ttcattccgg tcttcgggct caacaacgtg
     1861 ttcagccagg tgccgctggt cgggccgatc ctgggcggca gccgcaacga agggctgctg
     1921 gcaatcaact tccgcgtctc cggaccagcc agttcgccga cgctgaccgt caatccgctg
     1981 tcgctggtcg caccgggctt tctgcgcaag ctcttcggcg tcggctcgag cgacgcgacc
     2041 gcaaccatcc cgcccgtcgg atcgcagcgc tgggagcgtt gacgcaacgg ccagcgccaa
     2101 cccagggcct ccccggacat ggtcgtgagc ggcggtcgat tcagatcgtg cgcaacagca
     2161 cgtgtcgctt cttgccgaac gacagcttga tcacgccttc gggcgtcaga tcgctggcgc
     2221 gcagcatcgc ccgctcgtcg gtgacgggtt gatcattgac ccggaggccg ccgctcttga
     2281 tctgccgcct ggcttcgctg gttgacggca ccagccgggc gtattcgggg ccgaacgcgg
     2341 tcagcacgcc gagcccggcc tccagcacgc cgcgcggcat ctcgatcgtc ggcaggctct
     2401 cggcgagcgt cccttgctcg aacgtcttgc gcgcggtctc ggcggcaagc tccgccgcgt
     2461 cgcgcccgtg cagcagggcg gtcgcttcgg tcgcgagcac tttcttggcc tcgttgatct
     2521 cggccccgga cagacgctcg agacgcgcga tctcgtcgag cggcagcagc gtgaacagct
     2581 tcaggaaccg gccgacatcg gcatcctcgg tgttgcgcca gaattgccag taatcgtacg
     2641 gcgagagaag atcggcgttg agccacaccg caccggcggc ggtcttgccc atcttggcgc
     2701 ccgaagcggt cgtgatcagc gggcaggtga gggcgtagag ctgctccgtg ccgagccggc
     2761 gccccaggtc gatgccgttg acgatgttac cccactgatc cgaaccgccc atctgcagca
     2821 tgcagccatg tcggcggaac agctcgacga aatcataggc ctgcaggatc atgtagttga
     2881 attcgagaaa cgacagttcc tggtcccgct cgaggcgcag gcgcacgctg tcgaaagaca
     2941 gcatgcgatt gaccgagaag tggcggccga cgtcgcgcag gaactcgatg tagttgagct
     3001 tcgtcagcca ctccgcattg tcgaccatca gcgcatcagt cctgcccgcg ccgaactgga
     3061 tgaaacgcga gaaggtaccc t
//
LOCUS       DATAIQ010001129         1553 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_273787, whole genome shotgun sequence.
ACCESSION   DATAIQ010001129 DATAIQ010000000
VERSION     DATAIQ010001129.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1553)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1553)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1553
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_273787"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..795)
                     /locus_tag="VHN20_18635"
     CDS             complement(<1..795)
                     /locus_tag="VHN20_18635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015668098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX2727847.1"
                     /translation="MNKGNMLQDKVAVVTGAGRGIGRDIALMMAAQGAKVVVNDIGAS
                     VGGEGNDASHGQQVVNEIKAAGGQAVLSTDSVSTWPTANRIIECAADTFGRIDIVVNN
                     AGILRDRLFFNMSPEEWSAVIDVHLNGSFFTSRAAAPHFKTQKSGAYVHMTSTSGLIG
                     NLGQANYAAAKLGIVAMSRHIAGDMQRYNVRSNCISPFAWSRMIGAIPTDTPEQQARV
                     EKLKKLGTEQIAPMATFLASDAAADVTAQIFAVRGNEIFLMSQSRPI"
     gene            complement(826..>1553)
                     /locus_tag="VHN20_18640"
     CDS             complement(826..>1553)
                     /locus_tag="VHN20_18640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002716937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="acetyl-CoA acetyltransferase"
                     /protein_id="HEX2727848.1"
                     /translation="YALAAARHMHQYGTTREDLAHIAVAARQWAQLNPLAHARDPLSI
                     EQVLASRLVSDPLSVLDCCLVTDGGGALVLVRSERARDFPKPPVYVLGAAAATWHRQI
                     GSMPDLTVTAAAESGPRAFAMAGLAPKDVDVLELYDAFTINTLLFLEDLGFCAKGEGG
                     AFVRNGRIAPGGALPVNTNGGGLSCCHPGMYGMFLLIEAVQQLRAEAGDRQVPNAEIA
                     LCHGNGGVLSSQVTALLGTAATV"
BASE COUNT          244 a          489 c          552 g          268 t
ORIGIN      
        1 gatcgggcgc gactggctca tgaggaaaat ctcgttgccg cgcacggcga agatctgggc
       61 cgtgacgtcg gctgcggcat cgctggccag gaaggtggcc atgggcgcaa tctgctcggt
      121 accgagtttt ttcagttttt ccacgcgtgc ctgctgctcg ggtgtgtcgg tggggatggc
      181 gccgatcatg cggctccagg cgaacggcga gatgcagttg gaacgcacgt tgtagcgttg
      241 catgtcgccg gcgatgtggc gcgacatggc cacgatgccc agcttggcag cggcgtagtt
      301 ggcctggccc aggttgccga tcaggccgga cgtggaagtc atgtgcacat aggcacccga
      361 cttctgcgtc ttgaagtgcg gggcggcggc gcgcgaagtg aagaagctgc cgttgaggtg
      421 cacgtcgatg acggcgctcc actcctcggg cgacatgttg aagaacaggc ggtcgcgcag
      481 gatgccggcg ttgttgacga cgatgtcgat gcgaccgaag gtgtcggccg cgcattcgat
      541 gatgcggttg gccgtgggcc aggtcgagac gctgtcggtg ctgagaacgg cctggccgcc
      601 agcggccttg atctcgttga ccacctgctg gccgtggctg gcgtcattgc cttcgccgcc
      661 gaccgaggcg ccgatgtcgt tgaccaccac cttggcgcct tgcgccgcca tcatcagtgc
      721 gatgtcgcgg ccgatacccc ggcccgcgcc ggtgaccacg gcgactttgt cttgcagcat
      781 gttgcccttg ttcatgaaat gactcctggt tgttgatgtg aaaaatcaga cggtggcggc
      841 cgtgcccagc agggccgtca cctggctgga aagaacgccg ccgttgccgt ggcacagggc
      901 gatctccgca ttcggcacct ggcggtcgcc ggcctcggcg cgcagttgct gcacggcctc
      961 gatcagcagg aacatgccgt acatgcccgg gtgacagcac gacaggccgc cgccattggt
     1021 gttgaccggc aacgcgcccc ccggtgcgat gcgcccgttg cgcacgaaag cgccgccttc
     1081 gcccttggcg caaaagccca ggtcttcgag gaacagcagc gtgttgatgg tgaaggcgtc
     1141 gtacaactcc agcacgtcca catccttcgg ggccagcccg gccatggcga aggcgcgcgg
     1201 cccggactcg gcggcggcgg tgaccgtcag gtcgggcatg gagccgatct ggcggtgcca
     1261 ggtggccgcg gccgcgccga gcacatagac cggcggtttg ggaaagtcgc gcgcccgctc
     1321 gctgcgcacc agcaccaggg cgccgccgcc gtcggtgacc aggcagcaat cgagcaccga
     1381 cagcgggtcg ctaaccagac gcgaagccag cacctgctcg atgctgagcg gatcgcgtgc
     1441 atgggccagc ggattgagtt gcgcccactg gcgcgccgcc accgcgatgt gcgccaggtc
     1501 ctcgcgcgtg gtgccgtact ggtgcatgtg gcgagcggcc gccagcgcgt agc
//
LOCUS       DATAIQ010001130         2022 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_230203, whole genome shotgun sequence.
ACCESSION   DATAIQ010001130 DATAIQ010000000
VERSION     DATAIQ010001130.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2022)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2022)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2022
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_230203"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            392..799
                     /locus_tag="VHN20_18645"
     CDS             392..799
                     /locus_tag="VHN20_18645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727849.1"
                     /translation="MSVIRRGRIDQRNSLAPQPEAVMANVLEVSIRGKAAAAFGPSFQ
                     EMRRAGPPQEVEREFGAAIAWEASLAGLPNEILLLEDDGADVVARLRFVKCLAPPKPR
                     PTRERAAPARPSEAPAAAKPKPPAVPVPRGAIQ"
     gene            complement(820..>2022)
                     /locus_tag="VHN20_18650"
     CDS             complement(820..>2022)
                     /locus_tag="VHN20_18650"
                     /inference="COORDINATES: protein motif:HMM:NF012573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005509 - calcium ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HEX2727850.1"
                     /translation="NGGWAVAYTDEVSGMDHNAILRVYDAMGALVNDIALAIDPDKVE
                     RVASIAGGPDGTFLVTWEEWTKPVGDTIDFDIDVRAALFTNGGFAIGDAFQVNTVDTL
                     QNGTPVVTALNDGRYAVAWLRDNIRTVAIPPDGQTFVQILDGRDATITGNDSANALVG
                     HDTGQSNINDTILGLGANDRLFGLAGNDLLNGGLGADLMTGGIGNDTYVVDDPGDRAI
                     EGAGGGTDRVISSVAFTLGANVEHLTLTGAAGVRGTGNALGNTITGNDGNNLLSGLAG
                     NDKLTGGRGVDILVGGLGADVLTGGLGGDRFDFNSVAESRPSGRDTVVLQRAEGDKID
                     LFNIDADTDGTAGNQAFRFIGAAAFHGIDGELRFAGGLLQGDTNGDGIADLEIRVVGA
                     LLRTDVIL"
BASE COUNT          316 a          664 c          703 g          339 t
ORIGIN      
        1 gtccgactcc ctgagcgatg ctgcaggttc gtgcgacctc gtgatcgttc caccgtgacc
       61 gagattcgtc tgcgccgccg tgcggcaccg cacgcccgcg cgagccccgg aatttaggaa
      121 gatgcggtgc ctttgatccg ccgcggcggg ctctgctatg ggaaggcacg cagcggcgcg
      181 tcggtcgcgc cgaaggggag gagggcggag cctgatcatg cggcgggtgc gcactttcat
      241 gttgtcgctt tcgtgcttgc tcggagcgtc gccgggcctg gcccagacgg gatcacctgc
      301 agcgccggcg ggttcgccgg agcccggcac aacttcgtcc gaggtcactt gcgccggtgc
      361 cgccgtctac tgggcgggaa gcggaccgga ggtgagcgtc atccgacggg gcaggatcga
      421 ccagcggaac tcgctggcgc cgcaacccga ggcggtcatg gccaacgtcc tggaagtctc
      481 gatacgcgga aaagcggcgg ccgcattcgg gccgagcttt caagagatgc gccgggcggg
      541 gccgccgcag gaagtcgagc gggaattcgg cgccgcaatc gcctgggagg cgagcctcgc
      601 cggcctgccg aacgagattc tgcttctcga ggatgacgga gcggacgtgg tggcgaggct
      661 gcgcttcgtc aaatgcctcg cccctccgaa accacggccg acgcgcgagc gcgccgcgcc
      721 ggcacggccg agcgaagccc cggccgcggc aaagccaaag ccacctgcgg ttccggttcc
      781 gcgaggcgcc atccagtaag gccgggcgca gcgcgccggt cacaggatga cgtcggttcg
      841 gagcaaggcg ccgacgacac ggatctcgag atcggcgatc ccgtcgccgt tggtgtcacc
      901 ctggaggagg ccgcccgcga agcgcaactc gccgtcgatg ccgtggaagg cggccgcgcc
      961 gatgaacctg aacgcctggt tgcccgcggt cccatccgtg tcggcgtcga tgttgaacaa
     1021 atcgatcttg tcgccctccg cacgctgcag gacgacggtg tctcgcccgc tgggccggga
     1081 ctccgcgacg ctgttgaagt cgaaccggtc cccgccgagg cctcccgtga ggacatcggc
     1141 tccgaggccg ccgaccagga tgtcgacccc gcgcccaccg gtgagcttgt cgttgccggc
     1201 aagaccgctg agcaggttgt tgccatcgtt gccggtgatc gtgttgccaa gcgcgttgcc
     1261 cgtgcctctc acgcccgcgg cgcccgtcag ggtcaggtgc tcgacattgg cgccgagcgt
     1321 gaacgccacg gagctgatga cgcgatcggt gccgccgccg gcgccttcga tggcacggtc
     1381 gccaggatcg tcgaccacat aggtgtcgtt gccgatgccg cccgtcatga ggtcggcgcc
     1441 gaggccgccg ttgagcaggt cgttgccggc cagcccgaac aggcggtcgt tggcgccgag
     1501 gccgagaatg gtgtcgttga tgttgctctg gccagtgtcg tgcccgacga gggcattggc
     1561 gctgtcgttg cccgtgatgg tggcgtcgcg gccgtcgagg atctgcacga aggtctggcc
     1621 atcaggcggg atcgctaccg tgcggatgtt gtcgcgcagc caggcaactg catagcgccc
     1681 gtcgttcaac gcggtcacga ccggggtacc gttctgaagc gtatccaccg tgttgacctg
     1741 gaacgcatcg ccgatcgcga agccaccatt cgtgaataag gccgctctga cgtcgatatc
     1801 gaaatcgatg gtatctccca ccggcttggt ccattcctcc caggtgacga ggaaagttcc
     1861 atcgggccca ccggcgatgc tcgcgaccct ttcgaccttg tcggggtcga tggcgagagc
     1921 aatgtcgtta acgagcgccc ccatcgcgtc gtagacacgc agaatggcat tgtgatccat
     1981 gccgctgact tcgtccgtgt aggcaacggc ccagccgccg tt
//
LOCUS       DATAIQ010001131         5433 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_170475, whole genome shotgun sequence.
ACCESSION   DATAIQ010001131 DATAIQ010000000
VERSION     DATAIQ010001131.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 5433)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5433)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5433
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_170475"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1..175
                     /locus_tag="VHN20_18655"
                     /pseudo
     CDS             1..175
                     /locus_tag="VHN20_18655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018071480.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate binding protein"
     gene            172..4146
                     /locus_tag="VHN20_18660"
     CDS             172..4146
                     /locus_tag="VHN20_18660"
                     /inference="COORDINATES: protein motif:HMM:NF014763.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HEX2727851.1"
                     /translation="MSPPASTVRTPLFRKYVGLFVAVVAVALLANGALEIWFSYQEHK
                     ASLIRIQREQAEAAAAKIGQFVKEIENQLGWTTQLPWSASTVEQRRFDGLRLLRQVPA
                     ITELSMVDARGKEQLRVSRLAMDVVGSGIDLSNEPKFADAVARKVYYGPVYFRRESEP
                     YMTLALAGTRRDAGVSIAEVNLKLIWEVVSRIRVGERGYAYVVDGQGRLIAHPDISLV
                     LRNTDLSGLQQVKAARAGEAGAPEQLQVAENAQGRAMLTAHAPVAPLGWLVFVEMPLD
                     EAYAPLYGSIRRTGVLMLGALVLAVLAGFFLARRMIVPIRTLRAGAERIGGGDLAQRI
                     AVRTGDELEALAEQFNDMAGRLQESYADLEKKVELRTVELQESLEYQTATSDVLNVIS
                     RSPAQIQPVLDTIVETAGRLCEGYDAAILLRRGDQLEVAAHRGPIPIDFHTKPIGRGW
                     VTGRAVVDREPVHVRDLSVADDEFPAGQQIAQRLGFRTTLAAPLLREDMAIGAIMVRR
                     TEVRPFSDKQIAVLQTFADQAVIAIENTRLFEEVQSRTRELQETLDYQTATSEVLNVI
                     SRSPSQLQPVVDAIVETAARLCDAEYTLVYRLQDGHYHVAAANNVEAEFVKYAVEHPL
                     PAGRGSLTGRTALENRTIHLPDCLADPEYEVLERQRIGKYRTALGVPLLRDGVTIGVI
                     ALMRSVVKPFTDKQIELVTTFADQAVIAIENTRLFEEVRARTEELSETLQQQTATADV
                     LKVISNSLTDTQPVFDTIVQSGLRLFPGAAVSIALPEGGRVKAVAVAEADPVRAEAWW
                     RRFPFPLTRDYMHSLAILDGRMVDIPDVEDAPPELAVGKRNFLESGYRAVTIMPMMRG
                     ANAIGALSVVRVEPGPLSDKELATLRTFASQAVIAIENTRLLNELQTRTQELARSVGE
                     LRALGEVSQTVNSTLDLETVLSTIVAKAVQLSETEAGAIYVYSSRRQQFRLRATYGMS
                     DDLISAIRAQASHLGDTVLGEAVARRQPLQVADLRNEPPLSVNAILLEAGYRAVLIVP
                     LLRPDRVVGALVVRRRAPGQFPKSTIDLLATFAEQSVLAIQNARLFGEIEEKSRQLEI
                     ASRHKSQFLANMSHELRTPLNSVLGFTEMLADGLYGELPDRARGALTKVQNNGRHLLG
                     LINDVLDLSKIEAGQLTLALDDYSVTQVVNSVVTSTESLARAKGLALTAEIAAGLPIG
                     RGDERRLTQVLFNLVGNAIKFTDAGSVDISARMVDGAFELAVRDTGPGIAPADQERIF
                     EEFQQIDNSSTREKGGTGLGLAISRRIVELHGGTIVVQSVLGQGATFRMVVPVRAEEQ
                     REAA"
     gene            4143..4508
                     /locus_tag="VHN20_18665"
     CDS             4143..4508
                     /locus_tag="VHN20_18665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018011999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX2727852.1"
                     /translation="MTKRILMVEDTEDNRQIVRDLMASVGYHLIEAEDGAAGVAMAAA
                     ERPDLILMDIQLPVMDGYEAARRIKADPALRHIPIIAVTSYALSGDEAKTRAAGCDGY
                     VAKPFSPRQLLAKINEFLA"
     gene            4548..>5433
                     /locus_tag="VHN20_18670"
     CDS             4548..>5433
                     /locus_tag="VHN20_18670"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX2727853.1"
                     /translation="MQRRTFIALLGSLAACADAARAQHPEKTRVILWVSTEAEPDPFI
                     AGFREGMKERGYEEGRNLAFVLRYAPGDPAAVQAMLPELLTVPADLIVSSGPATRAMR
                     ATAGKPVLFAISGDPVELGLAESLSRPGRNFTGSTFLSLDLAQKRVQLLRELLPSVRA
                     LAILSNTTHPGEQAEHDATQKAADALSVRLAYMPFRSGAEIDEALARLRAANADAMLV
                     FPDGVTMVHRAKIADFARAHRLPSMFGWREYCDAGGCVSYGASQRATYKRLAVFADRL
                     LKGESPAELPIEQPTAFEL"
BASE COUNT          944 a         1832 c         1772 g          885 t
ORIGIN      
        1 gcgcgtatcg ggtcgcgacc tatttcgaca agattttcaa gggggccaag cccggagatt
       61 tgccgataga gtttccgacc aaacttagct tgtgatcaat ctcaaagccg ccaaggcgct
      121 cggcctcgat gtgcccgcaa ccttgctcgc ccgcgcagac gaggtgatcg aatgagcccg
      181 ccggcatcga ctgtgcggac gccgctgttc cgcaaatatg tcgggctgtt cgtcgccgtc
      241 gtcgcggtcg cgctcctcgc caacggagca ctcgagatct ggttctcgta ccaggagcac
      301 aaggcgtccc tgatccgcat ccagcgcgag caggccgaag ccgccgccgc caagatcggc
      361 cagttcgtca aggaaatcga gaaccagctc ggctggacca cgcagctgcc gtggtcggcg
      421 agcacggtcg agcagcgccg cttcgacggg ctgcgcctgc tgcggcaagt gccggccatc
      481 accgagctgt cgatggtcga cgcgaggggc aaggagcagc tgcgcgtctc gcgcctcgcc
      541 atggacgtcg tcggcagcgg catcgacctg tcgaacgagc ccaaattcgc cgacgcggtg
      601 gcgcgcaagg tctattacgg gcccgtctat ttccgccgcg agtcggagcc gtacatgacg
      661 ctcgcgctcg ccggcacgcg ccgtgacgcc ggcgtcagca tcgccgaggt caacctcaag
      721 ctgatctggg aggtggtctc caggatccgg gtcggcgagc gcggctatgc ctacgtggtc
      781 gacgggcaag gtcgcctgat cgcgcatccg gacatcagcc tcgtcctgcg caacaccgac
      841 ctgtcggggc tgcagcaggt gaaggccgcc cgtgccggcg aggcgggcgc gcctgagcaa
      901 ttgcaggttg ccgagaacgc gcaagggcgc gccatgctca cggcgcacgc gcccgtcgcg
      961 ccgctcggct ggctggtatt cgtcgagatg ccgctcgacg aggcctatgc cccgttgtac
     1021 ggctctatcc ggcgcacggg cgtgctgatg ctcggcgccc tcgtgctagc cgtgctcgcc
     1081 ggcttcttcc tggcacgcag gatgatcgtc ccgatccgca ccttgcgggc aggcgccgag
     1141 cgcatcggcg gcggcgatct tgcgcagcgc attgctgtca ggaccggcga cgagctcgag
     1201 gcgctcgctg agcagttcaa cgacatggcg ggacgtcttc aggaatccta cgcagatctc
     1261 gagaaaaagg tggagctgcg cacggtcgag ctgcaggagt ccctcgaata ccagactgct
     1321 acgagtgacg ttctcaacgt gatcagccga tcgccggccc agattcagcc agtccttgac
     1381 actatcgtag agaccgcagg ccggctttgt gagggatatg acgccgccat tctcctgcga
     1441 cggggcgacc agctcgaggt cgcggcccat cgtggcccca ttcccatcga cttccataca
     1501 aagccgatcg gacgtggctg ggtcacggga cgagccgtcg tcgatcgcga gccggtccat
     1561 gtccgcgatc tctctgtcgc cgatgatgag ttccccgcag gtcagcaaat cgcacagcgg
     1621 cttggctttc gcacaaccct tgccgcccct ctcctgcgag aggatatggc gatcggggca
     1681 atcatggtcc gccgcaccga ggtgcggcct ttctccgaca agcagatcgc cgttcttcag
     1741 acctttgccg accaggcagt catcgccatc gagaacaccc ggctgttcga ggaagtgcag
     1801 tcgcgcacgc gtgagctgca ggagacactc gactaccaga cggccacgag cgaggtcctc
     1861 aacgtcatca gccgctcgcc atctcagctg cagcctgtgg tcgacgctat tgtcgaaacg
     1921 gctgcgcgtc tatgcgacgc cgaatatacc ctggtgtatc ggttgcagga cggacactac
     1981 catgtcgccg ccgcgaacaa cgtcgaggcg gagttcgtca aatacgcggt cgagcatccg
     2041 cttccagcgg gacgcggctc gctgacgggc cgcacggccc tggagaaccg caccattcac
     2101 ctgccggatt gtctcgccga tccggaatac gaagtgctcg agcgccagag gattggcaaa
     2161 taccgcaccg cccttggagt accgctcctc cgcgatggcg tgacgatcgg cgtgattgcg
     2221 ctcatgcgca gcgtcgtcaa gccgtttact gacaagcaga tcgagctggt tacgacgttt
     2281 gccgatcagg cggtcatcgc catcgagaac acacgcctgt tcgaggaggt tcgggcgcgc
     2341 accgaggagc tgagcgagac gcttcaacaa cagaccgcca cggcggacgt gctcaaggtc
     2401 atcagcaact cgctcaccga cacgcaaccg gtgttcgaca cgatcgtgca gagcgggctc
     2461 aggctgttcc cgggagcggc agtcagcatc gcgctccccg agggcggccg ggtcaaggcg
     2521 gtcgcggtgg cagaggccga tcctgtccgc gccgaggcat ggtggcgccg cttccccttc
     2581 ccgctcacgc gcgactacat gcacagcctc gccatcctcg acggccgcat ggtcgacatt
     2641 cccgacgtcg aggacgcgcc gccggagctc gccgtcggca agcgcaactt cctcgagagc
     2701 ggctaccggg cggtcacgat catgccgatg atgcgcggag cgaatgcgat cggggccttg
     2761 agcgtggtgc gcgtcgaacc cggaccgctc tcggacaagg agctggcgac gctccggacc
     2821 ttcgccagcc aggcggtcat cgccatcgag aacacgcgcc tcctcaacga gctgcagacc
     2881 cggacgcagg agctcgcccg ttccgtcgga gagctgcgcg cgctcggcga ggtcagccag
     2941 acggtcaact cgaccctgga cctggagacg gttctgtcga ccatcgtcgc caaggcggtc
     3001 cagctgtcgg agaccgaagc cggcgcgatc tatgtctaca gtagccggcg ccagcagttc
     3061 cggctgcgcg cgacatacgg catgagcgat gacctgatca gcgccatccg cgcccaggcc
     3121 agccacctcg gcgacaccgt gctcggcgaa gcggtcgcca ggcggcagcc tctgcaggtt
     3181 gccgacctgc gcaacgagcc gcccttgtcg gtcaacgcga tccttctcga ggcgggctat
     3241 cgcgccgtcc tgatcgttcc cttgctgcgc ccggaccggg tcgtgggtgc gctcgtggtg
     3301 cgccggcgtg ctccgggcca gttcccgaag tcgacaatcg accttctcgc gaccttcgcc
     3361 gagcagtcgg ttctcgccat ccagaatgcg cgcctgttcg gcgagatcga ggagaagagc
     3421 cgccagctcg agatcgccag ccgccacaag tcgcagttcc ttgccaatat gagccacgag
     3481 ctgcgcacgc cgctcaactc cgtgctgggc ttcacggaga tgctggcgga cggactttac
     3541 ggcgagcttc ccgaccgcgc caggggcgcg ctgaccaagg ttcagaacaa cggccgtcat
     3601 ctgctcggcc tgatcaacga cgtcctcgat ctgtccaaga tcgaggccgg gcagctcacg
     3661 ctggcgctcg acgactactc ggtcacgcag gtcgtcaaca gcgtcgtgac cagcaccgag
     3721 tcgctggcgc gggccaaggg cctcgccttg acggccgaga ttgcggccgg gctgccgatc
     3781 ggccgcggcg acgagcgccg actgacgcag gtgctgttca acctcgtcgg caacgccatc
     3841 aagttcaccg acgccggctc ggtcgacatc tcggccagga tggtcgacgg cgctttcgag
     3901 ctcgccgtcc gcgacaccgg gccgggcatc gcgcccgcgg accaggagcg catcttcgag
     3961 gaattccagc agatcgacaa ttcgtcgacg cgcgagaagg gcggcaccgg cctcggcctc
     4021 gcgatttcca ggcgcatcgt cgagctgcac ggcggcacca tcgtcgtcca atccgtgctc
     4081 gggcagggcg caacttttcg aatggtcgtg cctgtgcgcg ccgaagaaca acgggaggca
     4141 gcatgacgaa gcgcatcctg atggtcgagg acaccgagga caaccgccag atcgtacgcg
     4201 acctgatggc gagcgtcggt taccacctga tcgaagcgga ggacggcgcc gcgggcgtcg
     4261 ccatggcggc ggcggaaagg cccgacctga tcctgatgga catccagctg ccggtgatgg
     4321 atggctacga ggccgcgcgc cgcatcaagg cagatccggc gctgcgccac atcccgatca
     4381 tcgccgtcac gtcgtacgcc ctctcgggcg acgaggccaa gacccgcgcc gccggatgcg
     4441 acggctacgt cgcaaagccg ttcagtccgc gccagctcct ggccaagatc aacgagttcc
     4501 tggcctgacg atgtgcggct ggtgaacggc tcgaggggag gaggcacatg cagcggcgga
     4561 ccttcatcgc gcttctgggt agcctcgctg catgcgcgga cgcggcacgc gcgcagcatc
     4621 ccgagaaaac gcgcgtcatt ctgtgggtct cgacggaggc cgagccggat cccttcatcg
     4681 ccggatttcg ggagggcatg aaagaacgcg gctacgagga aggccgcaac ctcgccttcg
     4741 tcctgcgtta cgcgcctggc gatcccgccg ccgttcaggc aatgctgccg gagcttttga
     4801 cggtgccggc cgacctgatc gtctcgagcg gcccggcgac ccgtgccatg cgggcgacgg
     4861 caggcaagcc ggtgctgttc gcgatcagcg gcgatccggt cgagctcggc ctcgcggaga
     4921 gtctgtcgcg tcccggacga aatttcaccg gcagcacctt tctgtcgctc gacctggcgc
     4981 agaagcgggt gcagctcctg cgcgagctgt tgccaagcgt tcgcgcgctc gcaatcctgt
     5041 ccaacacgac gcatccgggc gagcaggccg agcacgacgc gacccaaaag gccgcagatg
     5101 cgctctcggt ccgtctcgcc tatatgccgt tccgttccgg tgcggagatc gacgaggcgc
     5161 tcgcgcgcct gcgtgccgcg aacgctgacg cgatgctggt tttccccgac ggggtgacca
     5221 tggttcaccg ggcgaaaatc gcagacttcg ccagggcgca tcgcctgccc tcgatgttcg
     5281 gctggcgcga atattgtgac gcgggaggat gcgtcagcta tggagcgagc cagcgcgcga
     5341 cgtataagcg gctggcagtg ttcgccgacc gcctgctcaa gggcgagagc cccgccgagc
     5401 tgccgatcga gcaaccgacc gccttcgagc tgg
//
LOCUS       DATAIQ010001132         2395 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_273989, whole genome shotgun sequence.
ACCESSION   DATAIQ010001132 DATAIQ010000000
VERSION     DATAIQ010001132.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2395)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2395)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2395
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_273989"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..285
                     /locus_tag="VHN20_18675"
     CDS             <1..285
                     /locus_tag="VHN20_18675"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010685899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HEX2727854.1"
                     /translation="ADQSALHAEGDLVFAVRRMTIDFLKPARMDDVLVIETRTEEVRG
                     ATILIRQRVVRGDDVLVTADVTVACIGGGRPRRIPDALREQLAPRGPAPG"
     gene            777..1496
                     /gene="tolQ"
                     /locus_tag="VHN20_18680"
     CDS             777..1496
                     /gene="tolQ"
                     /locus_tag="VHN20_18680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003602810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein TolQ"
                     /protein_id="HEX2727855.1"
                     /translation="MNPAEAIATTQVAHDLSLFGLFWNAHIIVKLVMLGLVAASVWCW
                     AIIIDKTLLFARTKRAMDRFEEIFWSGQSLEELYRSLSDRSTTGLSAVFVAAMREWKR
                     SFEGSGRSVASLAQRIDKVLDVTIQREVHRLDSRLLFLASIGSAAPYIGLFGTVIGIM
                     NSFTSIAASKNTSLAVVAPGIAEALFATAVGLFAAIPAVLAYNKLQAEVAKAQVRLET
                     FADEFSAILSRQIDERIALAA"
     gene            1507..1956
                     /locus_tag="VHN20_18685"
     CDS             1507..1956
                     /locus_tag="VHN20_18685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007566852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HEX2727856.1"
                     /translation="MSVAAAHAKAHAGRRRRRSKRGHAINEINMTPFIDVMLVLLIVF
                     MVAAPLMTVGVPLDLPQTRAAPLNVDAKPISLSIRATGQVYFGEAELKDDEIVPRLTA
                     AAKQGAEERVFVRGDKRVDYGRVAQVMSIVTGGGFKRVALVTEPDPK"
     gene            2087..>2395
                     /locus_tag="VHN20_18690"
     CDS             2087..>2395
                     /locus_tag="VHN20_18690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="protein TolA"
                     /protein_id="HEX2727857.1"
                     /translation="MGLRFDSREPGIWIAGAAHALCLAAALLTLTSETFPEAQEGIPV
                     EIITDNQFSEITRGERTAQEVKPDPRPRVDRVAEVQEQRDPGEAQREVQAPPTRPADM
                     K"
BASE COUNT          381 a          812 c          811 g          391 t
ORIGIN      
        1 gccgaccagt cggcgctgca cgccgaaggc gacctcgtct tcgcggtgcg gcgcatgacc
       61 atcgattttc tgaaaccggc gcgcatggac gacgtgctcg tcatcgagac ccgcaccgag
      121 gaggtgcgcg gggcgacgat cctgatccgg cagcgcgtgg ttcgcggcga cgacgtgctg
      181 gtcaccgccg acgtgacggt cgcctgcatc ggcggaggcc ggccgcggcg catccccgac
      241 gcgctgcgcg agcagctggc gccccgtggt ccggccccgg gctgattcag gcccacgcgc
      301 cgcgcccaac tcttacgggc gctgcctcac aagtttcaat cctggattgc gggcgggcca
      361 gcagattcca gcaaaatgct gaaccgcatg ccggcatatg tcctgcgtcg catccgggct
      421 gccgcatggt cttgcgcaga acggcaccgg cacccggcgt cagcgtggcg ggacgccgac
      481 cttgcggcga tccacacctg tcatgcgcct gcgtgcggtc tcgcgctccc ctaaaccggg
      541 cgttaaccat ggcggggctt agcttttttg ccttcggcgg tggcggcccg aggccgtccc
      601 gccctcattt tcgacagatt tgaaggccac gagcaaaggc atgggataag gtcccggctt
      661 cgagcttgcg tgatcgctcc gggcgaggtg gtatcgcttc gccggatcat gctccgggag
      721 gcgaggggcc cttttcggcc gcgcacgggc ggctggggga caaggaacct gaacgaatga
      781 atccggctga ggccatcgca acgacgcagg tcgcccacga cctgtcgctc ttcgggctgt
      841 tctggaacgc ccacatcatc gtcaagctcg tgatgctggg ccttgtcgcg gcgtccgtgt
      901 ggtgctgggc gatcatcatc gacaagacgc tgctgttcgc gcgcaccaag cgcgccatgg
      961 accgcttcga ggagattttc tggtcgggac aatccctgga agagctctac cgctcgctca
     1021 gcgaccggtc gaccaccggc ctctccgccg tgttcgtcgc cgccatgcgc gagtggaagc
     1081 gctcgttcga gggctccggc cgctcggtcg ccagcctggc gcagcgcatc gacaaggttc
     1141 tcgacgtcac catccagcgc gaggtccacc gcctcgactc gcgcctgctg ttcctcgcct
     1201 cgatcggctc ggcggcgcct tatatcggcc tgttcggcac ggtcatcggc atcatgaact
     1261 cgttcacgtc catcgccgcg tcgaagaata ccagcctcgc ggtggtcgcg cccggcatcg
     1321 ccgaggcgct gttcgcgacg gccgtcggcc tgttcgcggc gatcccggcg gtgctcgcct
     1381 acaacaagct gcaggccgag gtggcgaagg cccaggttcg cctcgaaacc ttcgccgacg
     1441 agttctcggc gatcctgtcg cgccagatcg acgagcgcat cgcgctcgcc gcgtaaagga
     1501 cgatcgatgt cggtcgcggc agcccacgcc aaagcccatg ccggacggcg ccgccggcgc
     1561 tccaagcgcg ggcacgccat caacgagatc aacatgacgc cgttcatcga cgtcatgctg
     1621 gtcctgctga tcgtgttcat ggtggccgcg ccgctgatga ccgtcggcgt gccgctcgat
     1681 ttgccgcaga cgcgggcggc gccgctcaac gtcgacgcca agccgatctc gctgtcgatc
     1741 cgggccaccg gccaggtcta tttcggcgag gccgagctca aggacgacga gatcgtgccg
     1801 cgcctgaccg cggccgccaa gcagggcgcc gaggaacggg tgttcgtgcg cggcgacaag
     1861 cgtgtcgact acggacgcgt ggcgcaggtg atgtcgatcg tgacgggggg cggcttcaag
     1921 cgggtggcgc ttgtgacgga gccggacccg aagtagcagg ggcaggtttt cgggatccgc
     1981 acatgccatg gctcctgcgg aattccgaaa acctccagga acttaggacc ttgcaggttt
     2041 acgcgggcgc gcgcaaacct gcttgccacg gaagggcaga agcaacgtgg gcctgaggtt
     2101 cgacagcagg gaaccgggta tctggatcgc cggggcggcg catgcgttgt gcctggccgc
     2161 ggccctgttg acgctgacgt ccgagacctt tcccgaggcc caggaaggca tcccggtcga
     2221 gatcatcacc gacaaccagt tctcggagat cacccgcggc gagcgcaccg cccaggaggt
     2281 caagcccgac ccgcgcccgc gcgtcgatcg ggtcgccgag gtgcaggagc agcgcgaccc
     2341 gggcgaggcg cagcgcgagg tgcaggcgcc gccgacccgt ccagccgaca tgaag
//
LOCUS       DATAIQ010001133         2465 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_170618, whole genome shotgun sequence.
ACCESSION   DATAIQ010001133 DATAIQ010000000
VERSION     DATAIQ010001133.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2465)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2465)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2465
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_170618"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(111..560)
                     /gene="aroQ"
                     /locus_tag="VHN20_18695"
     CDS             complement(111..560)
                     /gene="aroQ"
                     /locus_tag="VHN20_18695"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011089126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003855 - 3-dehydroquinate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II 3-dehydroquinate dehydratase"
                     /protein_id="HEX2727858.1"
                     /translation="MSRLVFVLNGPNLNLLGKRQPAIYGHETLADVEAECRRAAGELG
                     LEIRFHQSNREYEIIDWIHEARETAAGIVINPAAFTHTSVAILDALNAFDAPVIEVHI
                     SNVHKREAFRHHSYVSLRADGVIAGLGTQGYILAIQRLARLIDQAKT"
     gene            752..1585
                     /locus_tag="VHN20_18700"
     CDS             752..1585
                     /locus_tag="VHN20_18700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015934250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008641 - ubiquitin-like modifier
                     activating enzyme activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ThiF family adenylyltransferase"
                     /protein_id="HEX2727859.1"
                     /translation="MIRGTTTLIAHLGYPTETFKAPMIYNPYFQKHGIDAVVMPMGVK
                     ADDFAAVFPALFRLTNIRGALITMPHKITTVALLDEVTTTVKIAGSCNAVLRRPDGSL
                     LGDMFDGAGFVRGVARKGQRLAGARVLVIGSGGVGSAIAASLAAAGIAAIGLFDANTA
                     AAEALGERLREHYPKITVAAGSNDPAGYDIVVNATPLGMKEGDPLPVDVARIAPGTFV
                     GEVVMKEEMTPLLRAAKAKGCPIQVGTDMLFEQIPAYLEFFGFGTTTPDELRAVAQIK
                     Y"
     gene            complement(1681..2250)
                     /locus_tag="VHN20_18705"
     CDS             complement(1681..2250)
                     /locus_tag="VHN20_18705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042314 - bacteriochlorophyll binding
                     [Evidence IEA];
                     GO_process: GO:0019684 - photosynthesis, light reaction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PRC-barrel domain-containing protein"
                     /protein_id="HEX2727860.1"
                     /translation="MRTYYVFHSASAPDLRGFAEDESGSHLPAEDGPWSLARRIGPDE
                     EWTLGISRAIVATGIRENGFYLWGPRSVTTSPKPIIESDRVEGTAVFDRNGNEVGTIK
                     RLLIEKVSGRVLYVDVTFGGFLGVGVHHHTIPWDKLVYDREFGGYRTDITEEQIKGAP
                     PFFGDDVWHDRNREQQMRDYWRDVSKLPV"
BASE COUNT          417 a          814 c          835 g          399 t
ORIGIN      
        1 gatcagtccg gcgccgagca ccgcgagacg aacgggaggt gtcatggtct ccccctcggg
       61 caggcccgag acaacgcaag tcgcgaacag gcgacttgcg ttcccgcgcc tcaggtcttg
      121 gcctggtcga taagccgcgc aaggcgctgg atggccagaa tatagccctg cgtgccgaga
      181 ccggcgatca cgccatccgc cctgagcgag acgtaggaat gatgacggaa ggcctcgcgc
      241 ttgtgcacgt tcgagatgtg cacctcgatc accggcgcgt cgaaggcgtt gagcgcgtcg
      301 aggatggcga cggaggtgtg cgtgaacgcc gccgggttga tgacgatgcc ggcggcggtc
      361 tcgcgcgcct cgtggatcca gtcgatgatc tcgtattcgc ggttgctctg gtgaaagcgg
      421 atttctagtc cgagttcgcc cgccgcgcgc cggcattccg cctcgacgtc ggcgagcgtc
      481 tcgtggccgt agatcgccgg ctggcgcttg ccgagcaggt tgaggttggg gccgttcagg
      541 acgaagacga ggcggctcat caaaagattc cgtgttttcg gggcgcgcgg ccgtcggttg
      601 ccctgccggc atcgcgcgcg gactcaacct gcccgctcgc gatcacctgc gcaagacgga
      661 gcaagcccca gttgacggat gaagaacgac cccgccatcc tgggacggcg gtcggcagcg
      721 ccggctgccg gctcggcgat gaggaggagc gatgatccgc ggcacgacga ccttgatcgc
      781 gcatctcggc tatccgaccg agacgttcaa ggcgcccatg atctacaacc cgtactttca
      841 gaagcacggc atcgatgcgg tcgtgatgcc catgggcgtc aaggccgatg atttcgcagc
      901 cgtgttcccc gccctgttcc ggctcaccaa tatccgcggc gccctgatca ccatgccgca
      961 caagatcacg accgtcgcgc tgctcgacga ggtcaccacg accgtgaaga tcgccggctc
     1021 ctgcaacgcc gtgctgcggc gcccggacgg ctcgctcctc ggcgacatgt tcgacggcgc
     1081 cggcttcgtg cgcggcgtcg cgcgcaaggg gcagcgcctc gcaggagcgc gggtgctcgt
     1141 gatcggcagc ggcggcgtcg ggtcggccat cgccgcctcg cttgcggccg ccggcatcgc
     1201 cgcgatcggg ctgttcgacg ccaataccgc agcggccgag gccctcggcg aacggctgcg
     1261 cgagcattac ccgaagatca cggtggcggc cggcagcaac gacccagccg gttatgacat
     1321 cgtcgtcaac gcgacgccgc tcggcatgaa ggagggcgac ccgctgcccg tcgacgtagc
     1381 gcggatcgcg cccggaacct tcgtcggcga ggtggtgatg aaggaggaga tgacgccgct
     1441 cctgcgcgcc gcgaaggcga agggctgccc gatccaggtc ggcaccgaca tgctgttcga
     1501 gcagatcccg gcctatctcg aattcttcgg cttcgggacc acgacgccgg atgagctccg
     1561 ggccgtcgcc cagatcaaat actagcggca gtgggcagca ggcagcaggc agcaggcagc
     1621 aggcagcagg aaactcgctg gcgagcgact gccgattgcc gattgccgat tgccatgtgg
     1681 tcagacgggc agcttggaca cgtccctcca atagtcgcgc atctgctgct cgcggttgcg
     1741 gtcgtgccag acgtcgtcgc cgaagaacgg cggcgcgccc ttgatctgct cttccgtgat
     1801 gtcggtgcgg tagccgccga actcgcgatc atagacgagc ttgtcccacg ggatcgtatg
     1861 gtggtgcacg ccgaccccga ggaacccgcc gaaggtcacg tcgacgtaaa gcacgcggcc
     1921 gctaaccttc tcgatgagga ggcgcttgat ggtgccgacc tcgttgccgt tgcggtcgaa
     1981 caccgccgtg ccttcgacgc ggtcgctctc gatgatcggc ttgggcgaag tcgtgacgct
     2041 gcgcgggccc cacagataga acccgttctc gcgaatcccc gtggcgacga tggcgcggct
     2101 gatgccgagg gtccattcct cgtccgggcc gatgcgccgg gcgaggctcc atggaccatc
     2161 ctcggcgggc agatggcttc ccgactcgtc ctcggcgaag ccgcgcaggt ccggggcgct
     2221 ggcagaatgg aacacgtaat atgttcgcat aacggcctcc atgcagccgc ccccgcccat
     2281 tgcttcacga gtcggaggca aatgcaagca tgggcgcgtt tcgcaagcac ctctgccgaa
     2341 aggcctggct cgcgaagcag gagaggcgcc atcgggtcga gccgaaggct cgcccgacgg
     2401 taaactccgc cgaccgggtg agggcgattt ccctcaccct caccctctcc cgcgagcggg
     2461 agaga
//
LOCUS       DATAIQ010001134         1803 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_170782, whole genome shotgun sequence.
ACCESSION   DATAIQ010001134 DATAIQ010000000
VERSION     DATAIQ010001134.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1803)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1803)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1803
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_170782"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..219)
                     /locus_tag="VHN20_18710"
     CDS             complement(<1..219)
                     /locus_tag="VHN20_18710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727861.1"
                     /translation="MLQALREIHAVAVLIRFVTQVLVGLVWFWENLLRPVTRTLLWRP
                     LKYALRKYRQLWDRVVYLKTGHFSRLRAG"
     gene            complement(232..>1803)
                     /locus_tag="VHN20_18715"
     CDS             complement(232..>1803)
                     /locus_tag="VHN20_18715"
                     /inference="COORDINATES: protein motif:HMM:NF019344.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX2727862.1"
                     /translation="ARSAAIELTQKYRTEHLQEAQPARAVTLLDRALAIYRLDAHSSP
                     PHLATLQARISKASAAERTGLEAQLRDETAAWVAQQEKVRKLYLELRHGEIAIQEHED
                     EIERLQEQERERAERRDAGEVPEEERPAAFRGAAAFMAANGVEGPAVTELRRKIAFLQ
                     GEVDKLRHQFATLTAQINKDLELDRAAVTAEFSAISGIDVAKLNEDEIEILRNLERTL
                     KARVFGQDHVLAQVANGIKVAKIGGLNGDKPLASYMFIGPSGVGKTEVAKAVTQALKG
                     DEKALLRFDMGEYMEKHAVAKLIGAPPGYEGFEVGGILTNAMRKNRNRVILFDEIEKA
                     HPDVFNVLLQVLDDGRLTDNIGRVADFSDAIIVMTSNIGQPYFLDKDLDWDEAKRLAA
                     VELERTYRSEFLNRFNGRQNIVCFNRLGLPEIERIVRREVAKIDAAYAPRGLATVVED
                     KHLEAFCREHYDPKTGARGLPGVIKTRLEPIIVNTILERPGSTGVFHVGYDAGVHDFI
                     VRFEERSPGLAASAA"
BASE COUNT          289 a          576 c          595 g          343 t
ORIGIN      
        1 gccggcgcgc agccgcgaga aatggccggt cttgagatag acgacacggt cccacagttg
       61 ccggtatttg cgcagcgcgt atttgagggg acgccacaac aacgtgcgcg tcaccgggcg
      121 cagcagattt tcccagaacc agacgagccc gacaaggacc tgtgtgacga agcggatcag
      181 gaccgcgacc gcgtgaatct cgcgcaaggc ctgcagcatg tcacccctcc gtcatgcggc
      241 gctggccgca agcccgggcg accgctcctc gaagcgcacg atgaagtcat ggacgcccgc
      301 atcgtagccg acgtggaaca cgccggtgct tccgggccgt tcgaggatcg tgttgacgat
      361 gatcggctcg agccgcgtct tgatcacgcc gggcagcccg cgcgcgccgg ttttcggatc
      421 gtagtgctcg cggcagaacg cctccaggtg cttgtcctcg acgaccgtcg ccaggccgcg
      481 gggcgcgtag gcggcgtcga tcttggccac ctcgcggcgg acgatgcgct cgatctccgg
      541 cagtcccagc ctgttgaagc agacgatgtt ctggcggccg ttgaagcggt tgaggaactc
      601 ggagcggtag gtgcgctcca gctcgacggc tgcaaggcgt ttggcctcat cccagtcgag
      661 atccttgtcc aggaaatacg gctggccgat gttggaggtc atcacgataa tggcgtctga
      721 gaaatcggcg acgcggccga tattgtcggt caagcggccg tcatcgagca cctgcagcaa
      781 cacgttgaac acgtccgggt gggctttctc gatctcgtcg aacaggatca cgcggttgcg
      841 gttcttgcgc atcgcgttgg tgaggatgcc gccgacttca aaaccctcgt agccgggcgg
      901 cgccccgatg agcttcgcca ccgcgtgctt ctccatgtat tcgcccatgt cgaagcgcag
      961 cagggccttc tcgtcgccct tgagagcctg ggtcacggcc ttggcgactt cggtcttgcc
     1021 gacgccggaa gggccaatga acatatagga ggcgagcggc ttgtcgccgt tgaggccgcc
     1081 gatcttggcg accttgatgc cgttggcgac ctgcgccagc acatggtcct ggccgaacac
     1141 gcgcgccttg agggtgcgct ccagattgcg caggatctcg atctcatcct cattgagctt
     1201 ggcgacgtcg atgcccgaga tcgccgagaa ctccgccgtg acggcggcgc ggtcgagctc
     1261 caggtccttg ttgatctggg ccgtcagcgt cgcgaattgg tggcgcagct tgtcgacctc
     1321 tccctgcagg aacgcgatct tgcggcgaag ctccgtgacg gcgggaccct cgacgccgtt
     1381 tgcagccatg aaggcggcgg cgccgcggaa ggcggcgggg cgttcttctt caggcacctc
     1441 gccggcatcg cgccgctccg cccgttcgcg ctcctgctcc tgcagtcgtt caatctcgtc
     1501 ttcatgctcc tggattgcga tttcaccgtg gcggagctcg agataaagct tcctgacctt
     1561 ttcctgctgg gcgacccagg ccgcggtctc atcgcgcaac tgcgcctcca aaccggtccg
     1621 ctctgccgcc gatgccttgc tgatccgcgc ttgcagggtc gcgaggtggg gcggcgagga
     1681 atgcgcatcg agacggtaaa tggcgagggc acggtcgaga agcgtcaccg cccgggccgg
     1741 ctgcgcttcc tgcagatgtt cggtcctgta tttctgggtc aactcgatgg cggcactgcg
     1801 ggc
//
LOCUS       DATAIQ010001135         2904 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_368846, whole genome shotgun sequence.
ACCESSION   DATAIQ010001135 DATAIQ010000000
VERSION     DATAIQ010001135.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2904)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2904)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2904
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_368846"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..832
                     /locus_tag="VHN20_18720"
     CDS             <1..832
                     /locus_tag="VHN20_18720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015823060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0043169 - cation binding [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="alpha amylase C-terminal domain-containing
                     protein"
                     /protein_id="HEX2727863.1"
                     /translation="SPGVITVAEESTAWPGVSHPTYTGGLGFGFKWNMGWMHDTLRYM
                     SKDPIHRRHHHHDLTFGLLYAFTENFILPLSHDEVVHGKGSLLGKMPGDRWQCFANLR
                     AYFGFMWGHPGKKLLFMGGEFGQEREWNHDHSLDWHLLDDPLHRGVQLLVRDLNRAYR
                     ELPALHERDCEAGGFRWLVSDDADNSAIAWARRGDDDHVVIVVSNFTPVPRGSYRVGV
                     PLPGFYREVINTDAAVYGGSDMGNLGGVWAEQKESHGQPYSITLTVPPLATLFLDREG
                     "
     gene            907..2352
                     /locus_tag="VHN20_18725"
     CDS             907..2352
                     /locus_tag="VHN20_18725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007599074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX2727864.1"
                     /translation="MKAEATAGVMVETDIPARLDRLPWGRFHKLVIVALGITWILDGL
                     EVTLAGALAGALKESPTLHFTNIELGLAATSYLIGAVGGAIFFGWLTDRLGRKKLFFI
                     TLFVYLLATAATAFAWDMWSFCLFRFLTGAGIGGEYTAINSTIQELIPARVRGWTDLV
                     INGSFWIGAAIGAAGSVVLLDPAYFGPDVGWRLAFFIGAMLGLVILLMRMWLPESPRW
                     LMTHGHAAEAETIVKGIEDRFRAEGHQLPPVTGPKVRLRSRTHTPLSEVFHTLFHVHR
                     RRAFVGLALMASQAFFYNAIFFTYALILTDFYGIKADAIGWYLLPFAAGNFLGPLLLG
                     RLFDTIGRKPMITFTYAVSGLLLAGTGYMFQQEMLGARAMTISWMVVFFFASAAASSA
                     YLTVSECFPLEIRALAIAVFYAIGTGIGGAAGPALFGALVETGSRTSIFAGYLFGSVL
                     MIAAAVMAAMWGVAAERKSLEAVARPLCFAD"
     gene            complement(2371..2517)
                     /locus_tag="VHN20_18730"
     CDS             complement(2371..2517)
                     /locus_tag="VHN20_18730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727865.1"
                     /translation="MTFEYVPTKGIVVDNARNLSLGEILKPREIGEVYFSFTEARESP
                     VRQL"
     gene            complement(2580..>2904)
                     /locus_tag="VHN20_18735"
     CDS             complement(2580..>2904)
                     /locus_tag="VHN20_18735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727866.1"
                     /translation="WFDDALRARNERATATWRQFEPAARARDIAQNGARVFVIYDAQD
                     RWVTPEQQWRFVGAVRKASGRAMAIQVDAHDQDHHDVQPQMRQVARSCIADLPDDVIM
                     RDSAP"
BASE COUNT          456 a         1019 c          891 g          538 t
ORIGIN      
        1 gtcacccggc gtcatcacgg tggccgagga atcgaccgcc tggccggggg tctcgcaccc
       61 gacatacacc ggcggcctcg gcttcgggtt caagtggaac atgggctgga tgcacgacac
      121 gctgcgctac atgtcgaagg atccgatcca ccgccgccac catcatcacg acctgacctt
      181 cggtctgctc tacgccttca ccgagaattt cattctgccg ctcagccacg acgaggtcgt
      241 gcacggcaag ggctcgctgc tcggcaagat gcccggcgac cgctggcaat gcttcgccaa
      301 cctgcgcgcc tatttcggct tcatgtgggg tcatcccggc aagaagctgt tgttcatggg
      361 cggcgagttc ggccaggagc gcgagtggaa ccacgaccac agcctcgact ggcatctgct
      421 cgacgacccg ctgcaccgcg gcgtgcagct cctcgtgcgc gacctcaacc gtgcctaccg
      481 cgagctgccg gccttgcacg agcgcgactg cgaggcgggc gggttccgct ggctcgtctc
      541 cgacgacgcc gacaacagcg ccatcgcctg ggcccgccgc ggcgacgacg accacgtcgt
      601 gatcgtggtc tcgaatttca cgccggtgcc gcgcggcagc tatcgtgtgg gcgtgccgct
      661 gcccgggttc taccgcgagg tcatcaacac ggatgccgcc gtctacggcg gcagcgacat
      721 gggcaacctc ggtggcgtct gggccgagca gaaggagagc cacggccagc cctactcgat
      781 caccctcacc gtgccgccgc tggcgacgct gttcctcgac cgcgaaggct gacacatcgc
      841 cgtgaaccgg cgccgcttca cgtcgttgtc ctcaaaaggg cacctgaaca cgacgaggaa
      901 gcgacgatga aagcagaggc gacggccggc gtgatggtgg agaccgacat tccggcgcgc
      961 ctcgaccggc tgccctgggg acggttccac aagctcgtca tcgtcgcgct cggcatcacc
     1021 tggatcctgg acgggctcga ggtgacgctg gccggcgcgc tggccggcgc gctcaaggaa
     1081 agcccgaccc tgcatttcac caacatcgag ctcgggctcg cggcgaccag ctacctgatc
     1141 ggagcggtcg gcggcgccat cttcttcggc tggctgaccg accggctcgg ccgcaagaag
     1201 ttgttcttca tcacgctgtt cgtctacctc ctcgccaccg ccgcgacggc cttcgcctgg
     1261 gacatgtgga gcttctgcct attccggttc ctcaccgggg ccggcatcgg cggcgaatac
     1321 accgccatca actcgaccat ccaggagctg atcccggcgc gcgtgcgcgg ctggaccgac
     1381 ctcgtcatca acggcagctt ctggatcggt gccgccatcg gcgcggccgg ctcggtggtg
     1441 ctgctcgacc cggcttattt cgggcccgat gtcggctggc gcctcgcctt cttcatcggc
     1501 gcgatgctcg gcctcgtgat cctgctcatg cgcatgtggc ttcccgaaag cccgagatgg
     1561 ctgatgacgc atggccacgc cgccgaagcg gaaacgatcg tcaagggcat cgaggaccgc
     1621 ttccgcgccg aaggccacca gctcccgccg gtgaccggcc cgaaagtgcg cctgcgctcg
     1681 cgcacgcaca cgcccctctc ggaggtgttc cacacgctgt tccacgtcca tcgccggcgc
     1741 gccttcgtcg gcctcgccct gatggcgtcg caggcgttct tctacaacgc catcttcttc
     1801 acctacgcgc tcatcctgac cgatttctac ggcatcaagg ccgacgcgat cggctggtat
     1861 ctgctgcctt tcgcggccgg caatttcctc ggtccgctgc tgctcgggcg cctgttcgac
     1921 acgatcggcc gcaagcccat gatcaccttc acctacgcgg tgtccgggct cctcctcgcc
     1981 ggcaccggct acatgttcca gcaggagatg ctcggcgcgc gcgccatgac catttcctgg
     2041 atggtggtgt tcttcttcgc ctcggccgcg gcgagctcgg cgtatctcac cgtcagcgaa
     2101 tgcttcccgc tcgagatccg cgcgcttgcg atcgccgtgt tctacgcgat cggaaccggc
     2161 atcggcggcg ccgccgggcc ggccctgttc ggcgccctgg tcgagaccgg ctcgcgcacc
     2221 agcatctttg ccggctacct gttcggatcg gtgctgatga tcgccgccgc ggtcatggcg
     2281 gcgatgtggg gcgtcgcggc ggagcgcaag tcgctcgagg cggtggcgcg accgctctgc
     2341 ttcgcggatt agccaaacgg cggcgtgacg tcacaattgt cttacgggac tttcccgggc
     2401 ctcggtgaag gagaaataca cttcaccgat ctcccgcggc ttcagaattt cgccaagcga
     2461 caagttgcgc gcattgtcga ccacgattcc tttcgtcgga acatattcga acgtcatatc
     2521 gtgtcaccgc tcactgaaac agcggtcgca tctgcgaaga agacgcaaat agcccgtcgt
     2581 cagggcgcac tgtcccgcat gataacatcg tccggcagat cggcgatgca gctccgcgcc
     2641 acctgcctca tctgtggctg aacgtcgtga tggtcttggt cgtgcgcatc aacctggatc
     2701 gccatcgcgc ggccgctcgc cttgcgaact gctccgacga accgccactg ttgttccggt
     2761 gttacccatc ggtcctgggc atcgtagatc acgaaaacgc gtgctccatt ctgggcgatg
     2821 tcgcgcgcac gggcagcggg ctcgaattgc ctccaggtcg ccgttgcgcg ttcgttccgc
     2881 gcacgcaacg catcatcgaa ccat
//
LOCUS       DATAIQ010001136         2422 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_368863, whole genome shotgun sequence.
ACCESSION   DATAIQ010001136 DATAIQ010000000
VERSION     DATAIQ010001136.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2422)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2422)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2422
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_368863"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..923
                     /gene="murA"
                     /locus_tag="VHN20_18740"
     CDS             <1..923
                     /gene="murA"
                     /locus_tag="VHN20_18740"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008760 - UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HEX2727867.1"
                     /translation="GGCAIGTRPVDLLLMAMERLGVTIEIEGGYVIARAPRGLKGAEI
                     NFPKVTVGGTHVALMAAVLADGTTVIDNAAREPEITDLAACLTKMGARISGAGTSRIV
                     VDGVARLGGASHEVLPDRIETGTYAMAVAMTGGDVLLQNTRPELLQSALDVLAQTGVD
                     VVPTNDGIRIRRNGNGLSAVDVTTDPFPGFPTDLQAQFMALMTRASGTSRIRETIFEN
                     RFMHVQELARLGAHIRLDGDSAIVDGVDRLKGAPVMATDLRASVSLVIAGLAAEGETM
                     INRVYHLDRGFEALETKLGRCGADVQRLRS"
     gene            1049..1489
                     /locus_tag="VHN20_18745"
     CDS             1049..1489
                     /locus_tag="VHN20_18745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015931414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2948 family protein"
                     /protein_id="HEX2727868.1"
                     /translation="MDLLRLVAFDAEDLAVISAHLQDAALRVGDLTYVPHEHCFALVA
                     RRFDWESSPDEQPRRRLVGLHFDRVMRVRCRGIDRSNRDAGLNLLGVTFTETDAPSGT
                     ATLLFEDGAAIQLDLECVEAQMKDLGPVFACDKRPTHDADVESA"
     gene            1489..2422
                     /gene="hisD"
                     /locus_tag="VHN20_18750"
                     /pseudo
     CDS             1489..2422
                     /gene="hisD"
                     /locus_tag="VHN20_18750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012561901.1"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0004399 - histidinol dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
BASE COUNT          352 a          862 c          837 g          371 t
ORIGIN      
        1 cgggcggctg cgccatcggc acccgtccgg tcgacctcct gctgatggcc atggagcgcc
       61 tcggcgtcac gatcgagatc gagggcggct acgtgatcgc cagggcgccg cgcggcctca
      121 aaggggcgga gatcaacttc cccaaggtga ccgtcggcgg cacgcatgtg gcgctgatgg
      181 cggccgtcct cgccgacggg accaccgtga tcgacaacgc ggcccgcgag cccgagatta
      241 ccgacctggc ggcctgcctg accaagatgg gcgcccgcat ctccggcgcc ggcacgtcgc
      301 gcatcgtggt cgatggcgtc gcgcgcctcg gcggcgcctc gcacgaggtt ctgccggacc
      361 gcatcgagac cggcacctac gccatggccg tggccatgac cggcggcgac gtgcttctgc
      421 aaaatacccg gcccgagctt cttcagagcg ccctcgacgt gctcgcccag accggggtcg
      481 acgtggtgcc gacgaacgac ggcatccgta tccgccgcaa cggcaacggg ctgtccgcgg
      541 tcgatgtcac gaccgacccg ttccccggct tcccgaccga tctgcaggcg cagttcatgg
      601 ccctgatgac cagggcgagc ggcacctcgc gcatccgcga gacgattttc gagaaccgct
      661 tcatgcacgt gcaggaactg gcccggctcg gcgcccatat ccgcctggac ggcgacagcg
      721 ccatcgtcga tggggtcgac cgcctcaagg gcgcgccggt catggcgacg gacctgcgcg
      781 cctcggtgtc cctggtcatc gccggtctcg ctgccgaggg cgagacgatg atcaaccgcg
      841 tctatcacct cgaccgcggc ttcgaggccc tcgagaccaa gctcgggcgc tgcggcgccg
      901 acgtgcagcg cctgcgctcg taacggcggt cgcctggcgc cgaccttacc gctcgctgtc
      961 gactgcctcc tccactccgt cgggtggttg cggtcggcgg tgggcgtcgc tacctgtgca
     1021 acagagttct ccagaacacg tcggtgccat ggacctgttg cgcctcgttg cctttgacgc
     1081 cgaagacctg gccgtgatct cggctcatct gcaggatgcc gccttgcgag tcggcgatct
     1141 cacctacgtg ccccacgagc actgctttgc gctggtcgcg cggcgcttcg actgggaatc
     1201 ctctccagac gagcagccgc ggcgccgcct tgtcgggctg catttcgacc gtgtcatgcg
     1261 ggtgcgctgc cgcggcatcg accgcagcaa ccgcgacgcg gggctcaacc tgctcggggt
     1321 gacgtttacc gagaccgacg ccccgtcggg gaccgccacg ctgctgttcg aggacggggc
     1381 cgcgatccag ctggacctgg aatgcgtcga agcccagatg aaggatctcg ggccggtttt
     1441 cgcgtgcgac aagcgcccga cgcatgatgc cgacgtggag agcgcttgat gccgctccgg
     1501 ctcgacgcgc gggacgacgc gtttccgcgc gccttcgcgg ggctcctggc gatgaagcgc
     1561 gagacgtcgc agggcgtcga cgagaccgtc gcgcagatca tcgccgacgt gatcgcacgt
     1621 ggcgatgagg cgctggtcga atacacgcgc cgtttcgacg ggctcgacgt cacgcccgac
     1681 gctttgcgca tcggcgaggc ggagagcgac gcggcgctcg cggcctgcag ccccgaggcg
     1741 ctgaacgcgc tcaaggtcgc gaaggaacgc atcgaggtct atcaccaggg ccagcggccc
     1801 aaggacgcgc agtggaccga cgcgctcggc gtgacgctcg gctggcgcta gacgccggtc
     1861 gattccgtcg ggctctacgt gccgggcggc accgcgagct atccctcgtc ggtcctgatg
     1921 aacgcggttc ccgccaaggt cgctggcgtg cgccggctcg tcatggtggt gccggcgccg
     1981 cgcggcgaac tcaacccgct gatcctggcg gccgcacggc tcgcgggggt cgacgagatc
     2041 tatcgcgtcg gcggcgcgca ggcgatcgcg gcgctcgcct acggcacggc gacgatctcg
     2101 ccggtcgcca agattgtcgg acccggcaac gcctatgtgg cggcggcgaa acggcgggtg
     2161 ttcggacagg tcggcatcga catgatcgcc ggcccgtcgg aagtgctgat cctcgccgac
     2221 gacagcgcca atccggattg gctggcggcg gaccttctcg cccaggccga gcacgacgcc
     2281 gccgcgcagg cggtcctgat caccgacagc cccaccctcg ccgacgccgt cgaaggcgcg
     2341 gtcgagcgcc agctcgcgac gctgccgcgg gccgccatcg caggtgccag ctggcgcgat
     2401 ttcggcgcca tcatcctggt gc
//
LOCUS       DATAIQ010001137         4850 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_369077, whole genome shotgun sequence.
ACCESSION   DATAIQ010001137 DATAIQ010000000
VERSION     DATAIQ010001137.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4850)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4850)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4850
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_369077"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1204)
                     /locus_tag="VHN20_18755"
     CDS             complement(<1..1204)
                     /locus_tag="VHN20_18755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012452903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX2727869.1"
                     /translation="MVRHERATDHGTAYAVLIAISVSHLLNDVIQSLLPAIYPILKET
                     YRLDFGQIGLLTLTFQATASLLQPVVGLQTDRRPTAYSLPVGMGVSLIGLLLLANTSS
                     FGMLLLAAALVGMGSAIFHPEASRVARLGSGGRHGFAQSVFQVGGSSGSALGPLLAAF
                     IVVPRGQSSIAWFSIVALVAMIILWNVGRWYRRRLSEGPRKPPRAAHEAAAAPARAKV
                     LLALGILVALIFSKNFYTASINSYYTFYLINKFDLPVQTAQIFLFLFLGSVAAGTLFG
                     GPIGDRFGRKYVIWFSVLGVLPFTLALPYVDLFWTGVLTVIIGLILASSFPAIIVYAQ
                     ELVPRRTGMISGLFFGLGFGMGGLGAAVLGQLADATSITVVYQVCSFLPAIGLLAAFL
                     PDVRAKRTV"
     gene            complement(1280..2617)
                     /locus_tag="VHN20_18760"
     CDS             complement(1280..2617)
                     /locus_tag="VHN20_18760"
                     /inference="COORDINATES: protein motif:HMM:NF024792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein TadG-related protein"
                     /protein_id="HEX2727870.1"
                     /translation="MSLQFISDRRGNVAMIFAIALPMLLGLVGAAIEYGRSADAHSKL
                     QAATDAAALAAARQPRSMPPAEFTTKARQVFDTMLPPGGGITTTEFTASRSGNAIEVK
                     AKASFATSLIQPLGFSNVDLASESRSQSGSRNVEVVLALDNTGSMASNNKMPELKKAA
                     KRLVDILEQSVTQPGQVKIGLVPFATSVRVNPASGAGYRTATWIDFTRGDGSATVCSQ
                     AGGNWGWLLGQICVDHSNNDVNKSTWQGCIEDRASPNNATDARVETGNLATMYPALQN
                     CRQDENHLVFVQPLSTAYSSLRTAIDNMTPGGNTNVTIGVAWGLSLLSRQDPFPEGVA
                     YTDKEVAKFLIVLTDGQNTQDRFDNCGGTQSCIARMNARTLAACDAAKNAVTDPNLNR
                     ITVYTIRVIDGDADLLRRCASDPSKFFDVKNAGQLEPVFMGIGDSIASLRLTH"
     gene            complement(3401..4330)
                     /locus_tag="VHN20_18765"
     CDS             complement(3401..4330)
                     /locus_tag="VHN20_18765"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEX2727871.1"
                     /translation="MRIITSSPPGGGYDSYSRLFARHMSKYIPGNPTIVVNHMPGAGG
                     IRAANFLYNVAPKDGTTFSLIDRSVATAPLLYGSDSKAQYDAVKFSWLGSAMRESGMG
                     VVSTRSPVRSIEDVKKQELVIGATAPEQDPSMYARLLNELLGTKFKTIHGYAGQPEQF
                     LAIEKGEVDGLFMSGWSGNGRAYVRDKMAKGEMRLLVQISAHKDPMHMETPTLLDLVT
                     DPGSRQIVELLLSRLSLGRPFLTPPGVPADRVALLREAFRRAINDPDLRAEAAAQRLA
                     IDPIYGEEAEQIIKQIYQSSPELLERARKIIRV"
     gene            complement(4652..>4850)
                     /locus_tag="VHN20_18770"
     CDS             complement(4652..>4850)
                     /locus_tag="VHN20_18770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727872.1"
                     /translation="WFDNTGTITRTYTYFDNGSVNDATTGFDPGITTLESLSTYNYTY
                     SDFRSYVWDYNYTYDSGTSFA"
BASE COUNT          883 a         1510 c         1614 g          843 t
ORIGIN      
        1 aaaccgttcg tttggcgcgg acgtccggaa gaaaggccgc gagcaggccg atggccggga
       61 ggaacgagca cacctgatag acgacggtga tgcttgtcgc atcggcgagc tggccgagca
      121 cggcggcgcc caatccaccc atgccgaagc cgaggccgaa gaacaggccc gaaatcatcc
      181 cggtcctccg gggcacgagc tcctgcgcat agacgatgat ggcggggaat gacgacgcca
      241 ggatcagccc gatgatgacc gtcaggaccc cggtccagaa gaggtccacg tacggcagcg
      301 ccagcgtgaa cggcagaacg ccgagcacgg aaaaccagat gacgtatttg cggccgaagc
      361 ggtcgccgat cggaccgccg aagagcgtgc ccgccgccac ggagccgagg aacaggaaca
      421 ggaagatctg cgccgtctgc acaggcagat cgaatttgtt gatgaggtag aaggtgtagt
      481 agctgttgat gctcgcggtg tagaaattct tcgagaagat cagcgcgacg aggatgccga
      541 gcgccagcag caccttcgct cgtgccggcg ccgccgcagc ttcgtgagcg gcgcgcggcg
      601 gcttgcgcgg accttccgaa aggcggcggc gataccaccg gccgacgttc cagaggatga
      661 tcatcgcgac gagcgccacg atcgagaacc aggcgatgct cgactgcccg cgcgggacca
      721 cgatgaaagc cgcaagaagc ggcccgaggg ccgatccgct gctgccgccg acctgaaaca
      781 cggactgggc gaatccgtgc cggccgcccg acccgaggcg cgcgacccgg gacgcctcgg
      841 gatggaatat cgccgacccc atgccgacca gggcggcggc cagcaacagc atcccgaagc
      901 tggacgtgtt ggcgagcagc agaagcccga tcaggctcac gcccatgccg acgggcagcg
      961 agtaggccgt gggacgacgg tcggtctgca acccgaccac cggctgcagc agagaggcgg
     1021 ttgcctggaa ggtcagcgtg agaagcccga tctgaccgaa gtcgaggcga taggtctcct
     1081 tcagaatcgg gtagatggcc ggcaggagcg actgaatgac gtcgttcagg aggtgcgaga
     1141 cgctgatcgc gatgaggacc gcgtaagccg tgccatggtc cgtcgcacgc tcatgcctca
     1201 ccacctgtcg cttcctccgg ctccggccca cccattacgt ggtttgcgcg ggccgtgcca
     1261 gagtgcaatg cggcgagggt cagtgcgtca ggcggaggct cgcgatcgag tcgccgatgc
     1321 ccatgaacac aggttcgagc tggcctgcgt tcttcacatc gaagaacttt gaagggtcgc
     1381 tcgcgcagcg ccgcaacagg tccgcgtcgc cgtcgatgac gcggatcgtg tagacggtga
     1441 tccggttgag gttcgggtcc gtcacggcat tcttggcggc gtcgcaagct gccagggtgc
     1501 gtgcgttcat gcgggcaatg cagctctgcg tgccgccgca gttgtcgaag cggtcctgcg
     1561 tgttctggcc gtcggtgagc acgatcagga acttggcgac ctccttgtcc gtataggcga
     1621 cgccttccgg gaaaggatcc tgccgcgaca gcagcgacag gccccatgcc accccgatcg
     1681 tcacgttcgt gttcccgccc ggggtcatgt tgtcgatcgc ggtccgcagc gacgagtagg
     1741 cggtcgagag cggctgcacg aacaccaggt ggttctcgtc ctggcggcaa ttctgcaagg
     1801 ccggatacat cgtggccagg tttccggtct ccacccgggc atccgtggcg ttgttggggc
     1861 tggcgcgatc ctcgatgcac ccttgccagg tggacttgtt gacgtcgttg ttggagtgat
     1921 cgacgcagat ttgcccgagc agccagcccc agttgccgcc ggcctggctg cagacggtcg
     1981 ccgatccatc gccgcgggtg aaatcaatcc acgtggcggt tcgatagccc gcgccagacg
     2041 ccgggttcac gcgcaccgac gtggcgaagg ggaccagccc gatcttcacc tgaccaggtt
     2101 gcgtgacaga ctgttcgagg atgtcgacca gacgcttcgc cgccttcttg agctccggca
     2161 tcttgttgtt gctcgccatc gagccggtgt tgtcgagcgc caggacaacc tcgacgtttc
     2221 tcgacccact ctgagaacgg ctttccgagg ccaagtcgac attcgagaag cccaacggct
     2281 ggatgagcga ggtcgcaaac gacgctttcg ccttgacctc gatggcattg ccggagcgtg
     2341 acgcggtgaa ttcggtggtg gtgatgccgc cccctggggg cagcatcgta tcgaagacct
     2401 gccgcgcctt ggtggtgaac tcggccggcg gcatggaccg cggctgccgg gcggcggcaa
     2461 gcgcggccgc gtcggttgcg gcctgcagtt tcgagtgagc gtccgccgat ctgccgtatt
     2521 cgatagccgc gccaaccaag ccgagaagca taggaagggc gatggcgaat atcatcgcca
     2581 cattgccgcg tcgatcggaa atgaattgca atgacatggg aaggttccgc actcttaaac
     2641 tatacaatac cagagccggc gcacttcacc tagaagatag cctagatgtg gtgttcagat
     2701 cgttgatccc gttcgggaag ctgccgggcc ggccacatcc gggcgccatt catccctgcc
     2761 gcggcgttcg gcagccgatt ccgcccgcga atgtggtttg cggaacgtta acggctgaag
     2821 cgcgccggat gacccgcggc ccttgctccc catgaacttg tcggacggat cgccgcgtat
     2881 cgtcggagcc gatccacgcc tccagcggcg tggtgcactg tgaaggacca agccgagccg
     2941 gctaccaaga ccggtgccgc tgaaacgtag ggaacgagaa tattattcgt ctgggaccga
     3001 gcgtgccgta agcgacgagg ttccgtccgt agttgcggag gttcaattcc gcctccatgc
     3061 cgtcgccaca gctcaactta gcttgccggt gaacgcccac cactctgcgc agagcgcccg
     3121 aacactttac gccttggttc gtaaacatgg cgacattgcc ttcaagaggt ccctcgtcgt
     3181 aaaatacgac cctccctgag agcgtctccg aggtgccttc gaccacgccc gtgaagggca
     3241 agtgtgtcga tattgcgcag aggaatgggg ctactaagaa cgccagccct cgaagcaggt
     3301 attgtcgcat cacttccgaa cgggacggct tgtgtcggcc ggcttggcgg ggagagacat
     3361 ggcttgcctt tcgagatgcg caacgcgccg ccactgtcct ctacacgcgg atgatcttgc
     3421 gggcgcgctc gagcagctcc ggagacgact ggtagatctg cttgatgatc tgctcggcct
     3481 cctccccgta gatcgggtcg atggcgaggc gctgcgccgc ggcctcggcg cgcaggtccg
     3541 gatcgttgat ggcgcgccgg aaggcctcgc gcagcagcgc cacgcggtcc gccgggacgc
     3601 cgggcggcgt gaggaacggc cggccgaggg acaggcgcga cagcagcagc tcgacgatct
     3661 gccggctgcc gggatcggtg accaggtcca gcagcgtcgg cgtctccatg tgcatcgggt
     3721 ccttgtgcgc cgagatctgc accagcaacc gcatctcgcc cttggccatc ttgtcgcgca
     3781 cataggcgcg gccgttgccc gaccagccgc tcatgaaaag tccgtcgacc tcgcccttct
     3841 cgatcgccag gaactgctcc ggctggccgg catagccatg gatcgtcttg aacttcgtgc
     3901 cgagcagctc gttgagcagg cgcgcataca tcgacgggtc ctgctcgggc gcggtggcgc
     3961 cgatcaccag ctcctgcttc ttcacgtcct cgatgctgcg caccggcgag cgcgtcgaga
     4021 cgacgcccat gccggattcg cgcatggcgc tgccgagcca gctgaacttg acggcgtcgt
     4081 attgcgcctt cgagtcactg ccgtagagca gcggcgccgt ggcgacgctg cggtcaatca
     4141 gcgagaatgt ggtgccgtcc ttcggcgcca cgttgtagag gaagttggca gcgcggatgc
     4201 cgccggcgcc gggcatgtgg ttgacgacga tggtcggatt gccggggatg tatttgctca
     4261 tgtgcctcgc gaacaggcgc gaatacgaat cgtagccgcc gccgggcggg ctgctcgtga
     4321 tgatgcgcat ctccgacctg gagcggaaga attcctcggc cgtttgcgcc gcagcggtcc
     4381 tactcgtcag ccccagcacg gggggcgcgg cgagagcggc aagaccgcac gatgttaagc
     4441 gacgacgtga cagcatgttt cccccggctc cgacccgatc ctcgcacgat aggggcttgt
     4501 gcagccgagt aaagagccgg ggctggtcgc gtttggaggc cgcggccccg ggggcaacac
     4561 atccgtccgc cgcgtcgacc gcccggggca acaccgcatc ttttcaaagc cgtaatcccg
     4621 ggaagcgccc cgcttccgac cgaggttaat ttcaggcgaa ggaggtgccg ctgtcgtacg
     4681 tgtagttgta gtcccacacg tagctacgga aatcggagta ggtgtagttg taggtcgaca
     4741 acgactccag cgtcgtgatt cccggatcga agcccgtggt ggcgtcgttc acgctcccgt
     4801 tgtcgaaata ggtataggtc cgggtgatgg ttccggtgtt gtcgaaccag
//
LOCUS       DATAIQ010001138         1918 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_79325, whole genome shotgun sequence.
ACCESSION   DATAIQ010001138 DATAIQ010000000
VERSION     DATAIQ010001138.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1918)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1918)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1918
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_79325"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..255)
                     /locus_tag="VHN20_18775"
     CDS             complement(<1..255)
                     /locus_tag="VHN20_18775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727873.1"
                     /translation="MTALPTITSIPAPAPRIDRATYERLARRARLLSWLSLAWMTVEG
                     AVAISAGLVASSIALVGFGLDSAIEGFASLVIVWRFTGSRM"
     gene            complement(252..608)
                     /locus_tag="VHN20_18780"
     CDS             complement(252..608)
                     /locus_tag="VHN20_18780"
                     /inference="COORDINATES: protein motif:HMM:NF033788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HEX2727874.1"
                     /translation="MPDDRCDLLCLDLPKAERLRGERLPGDAAAGFAERAKALGDPTR
                     LMLAAALADGGELCVCDLAWVAERSENLVSHHLRVLRSAGLVRSRREGKMVMYAVTAA
                     GSALIDAVRQPETVAR"
     gene            complement(672..1865)
                     /locus_tag="VHN20_18785"
                     /pseudo
     CDS             complement(672..1865)
                     /locus_tag="VHN20_18785"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
BASE COUNT          310 a          681 c          646 g          281 t
ORIGIN      
        1 catccgcgag cccgtgaagc gccacacgat caccagcgac gcgaagccct cgatcgcgct
       61 gtcgagcccg aagccgacga gtgcgatcga cgaggccacc agcccggcgc tgatcgcaac
      121 cgcaccctcg accgtcatcc acgccaggct caaccacgag aggagccgcg cccggcgcgc
      181 gagccgctcg taggtcgctc gatcgatccg cggggccggc gccggtatcg aagtgatcgt
      241 cggtagtgcc gtcatcgcgc caccgtctca ggctggcgca cggcgtcgat cagggcgctg
      301 cccgcggcgg tgaccgcgta catcaccatc ttgccctcgc ggcggctgcg cacgaggccg
      361 gcgctgcgca gcacgcgcag gtggtgcgag acgaggttct ccgagcgctc cgcgacccat
      421 gccaggtcgc acacgcagag ctcgccgccg tcggccaacg ccgcggcgag catcagccgc
      481 gtcggatcgc cgagcgcctt ggcacgctcc gcaaacccag cagccgcatc gcccggcagc
      541 cgttcccctc gcagccgctc ggccttcggg agatcgaggc acagcagatc acagcggtcg
      601 tccggcatcg cggcatcgta ctaacgtctc aacagtgatt gagatgtatg ccgtccagcg
      661 tcggcccgac ctcaccacag gggctcctga gtggatccgt cagcctcccg ctcgcccggc
      721 gccggtggcg tagccccacc gaacgcacgc tgtgcccaga ccgcgccttg cgtcgggtcg
      781 ggtgcgaaat cggcgtagat ctcggtcgtc ttgtagtcgc gatggcccat ccagccctgc
      841 agggttcgca gcggcgtccc agccgccgcc atacgggtgc cgtacgtgtg acgaagatcg
      901 tggaaccgca ggtcacgcag accggcgcgc ttgagcgccg ccttgaaccg cacgcggctc
      961 ttgctcgcgt catatggccg gccggtctgc ggatggcaga agaccaggtc atcgtcgtgc
     1021 gtatacgccg agcgctggaa gtggtgctcg agctccgcgg cgacacgatc ggccatggga
     1081 acagcgcgac tcgcgcgtcg gctcttgggt gtcgttcatt gcccgcgtga atagctgcgt
     1141 cggacgcgca cgaggcgcgc cgaccagtct acgtcgcgcc agcggagcgc cgcgagctca
     1201 ccctgacgaa ggcccgtcat cgcggcggtg agccacagca cccgatcggt gggtccgagc
     1261 aggtcggcgg cttcggcgcg gagcagcgcc tcgagttcct cgcggtcgag gaagcggatg
     1321 tcgggatcca ccggcggcga caccgggcgg tccgccaggg caaccgggtt gcggacgacc
     1381 cagccgcgcc ggatcccgaa tgcgaagacg ccgtgcgcaa aggtcagttg gttcgtgatg
     1441 gtcttgaccg ccagcccgga gcgttgcttg gctgtgacgt aggcgatcac gtcggcggcg
     1501 tcgagcttgg tgacctccgt ggcgccgaag aaggggccga ggtgtcgcag cagcatgatc
     1561 cggtagtcct ggatcgtcgt gcgcttgcgc tgcatgacct cctcgaggtg ctggatgtag
     1621 cggcggccca tctcctcgaa cgtcagccgc tcggtgggcg cgggaagcga cgtctccgcc
     1681 atcagcgcgc gtaggcgcgc ttcggcctgg gcgcgcgtga ggccggtgcg tgttccgggc
     1741 tggcgaacgg gcccgagctt gcgcatcacc tgccggccat gaacacgcca cttcccgtag
     1801 tacgcatccg acgtcacgaa gaccgaccca gacccataag cccgtcgccc tccagcagtc
     1861 gccatccgat gaataggcac ccgaaagaaa aactcgcccc ctcccaccga ggaccagc
//
LOCUS       DATAIQ010001139         1802 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_79713, whole genome shotgun sequence.
ACCESSION   DATAIQ010001139 DATAIQ010000000
VERSION     DATAIQ010001139.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1802)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1802)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1802
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_79713"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..845
                     /locus_tag="VHN20_18790"
     CDS             <1..845
                     /locus_tag="VHN20_18790"
                     /inference="COORDINATES: protein motif:HMM:NF012534.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HEX2727875.1"
                     /translation="RLAEAQRHLDLAHQLGRDDPVSALGEAQQADQLARLALDLAQDD
                     VSQWNGGGGYGGGFGGGYGGGGGGNYRGGGGGGGYGDRGGFGGGGGYGGGGGGGGFRG
                     GGGGGGFRGGGGGGMPPQVVGEGKGVVKFFNPQKGFGFIVRDDGGEDVFVHISAVEQA
                     GLTDLADGQPLEFTLVDRGGRISATNLRIDGEPMAVERAAATPQRQLTGEKASGTVKF
                     FNAMKGFGFIQRDDGQPDAFVHISAVERAGMTSLNEGDRLEFELEVDRRGKHAAVNLS
                     PLQS"
     gene            complement(909..>1802)
                     /locus_tag="VHN20_18795"
     CDS             complement(909..>1802)
                     /locus_tag="VHN20_18795"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018184974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX2727876.1"
                     /translation="SQGEYVFDHGWADAWQRAGGDYYPKLQMAVPFTPVVGKRLLGHA
                     PELLLAGAEAVVTQNNLSSGHITFLTEEEASVAEARGWLVRHGIQYHWLNRGYASFDN
                     FLDACSSRKRKTLRKEREQARSGLTFRHLRGAEIGSAEMDAMWRFYQDTGSRKWGRPY
                     LTRAFFQQAVERLGDQLLLFLAERDGLPIAGALNWVGIDTLYGRYWGCTEEVPFLHFE
                     LCYYQSIDWAITHGLQTVQAGAQGEHKLARGYEPVRTYSVHFLPNVGFRDAVKRFLTE
                     ERRAVEQELQALRDELPFKKG"
BASE COUNT          284 a          584 c          629 g          305 t
ORIGIN      
        1 cccggctggc cgaggcgcag cggcacctcg acctcgccca ccagctcggc cgggacgacc
       61 cggtgtccgc gctcggcgag gcccagcagg ccgaccagct cgcgcgcctc gcgctggacc
      121 tggcgcagga cgacgtctcg cagtggaacg gtggcggcgg gtacggcgga ggcttcggcg
      181 gcggttacgg cggcggcggg ggcggtaatt accgtggcgg cggcggtggt ggcggctatg
      241 gcgaccgcgg cggctttggc ggtggtggcg gctacggcgg cggtggcgga ggcggtggct
      301 ttcgcggcgg cggtggtggc ggcggtttcc gcggcggcgg cggtggcgga atgcccccgc
      361 aggtcgttgg cgaaggcaag ggcgtcgtca aattcttcaa cccgcagaag ggcttcggct
      421 tcatcgttcg cgacgatggc ggcgaggacg tgttcgtgca tatctcggcg gtcgagcagg
      481 cgggtctcac cgacctcgcg gacggtcaac cgctggagtt cacgctcgtc gatcgcggtg
      541 gccgcatctc ggcgaccaac ctgcgtatcg acggtgagcc gatggcggtg gagcgggcag
      601 ctgccactcc gcagcgtcag ctgaccggcg aaaaggcctc gggcaccgtc aagttcttca
      661 acgcaatgaa gggctttggc ttcattcagc gcgacgacgg acagccggat gcctttgtgc
      721 acatttcggc cgttgagcgc gccggcatga ccagcctcaa cgaaggcgac cggctcgagt
      781 ttgagctgga ggtcgatcgc cgcggcaagc atgccgcggt caacttgtcg ccgctgcaga
      841 gctaactcgc gttcacgcga ggggcagaaa gggctcgccg gaggatactt cggcgggcct
      901 tttctttatc agcctttctt gaagggcagc tcgtcccgga gcgcctgcag ctcttgctct
      961 accgcccggc gttcctcggt gaggaaacgc ttcacggcat cgcggaagcc cacgttcggc
     1021 aggaaatgca cgctgtacgt tcgcaccggc tcgtagcccc gagctaactt gtgttcgccc
     1081 tgcgcccccg cctgcaccgt ctgcaggccg tgcgtgatcg cccagtcgat cgattgataa
     1141 tagcaaagct cgaagtggag gaacggcacc tcttccgtgc acccccaata gcggccgtag
     1201 agggtgtcga tgccgaccca gttgagcgct ccggcgattg gcaagccatc ccgctcggcc
     1261 aggaacagca gtagctgatc gcccagccgc tcgaccgctt gctggaagaa ggcacgggtc
     1321 agataggggc gcccccactt tcgggaaccc gtgtcctggt agaagcgcca catggcgtcc
     1381 atctcggcgc tgccgatctc ggctccgcga agatggcgga aggtgaggcc gctgcgggcc
     1441 tgctcgcgct ccttgcgcag cgtcttgcgc ttgcggctgg agcaggcgtc caggaaattg
     1501 tcgaagctgg cgtagccgcg attgagccaa tgatactgga tgccgtggcg aaccagccag
     1561 ccgcgcgcct ccgcgaccga cgcttcctcc tccgtcagga aggtgatgtg ccctgacgac
     1621 aggttgttct gggtgacgac cgcctcggcg ccggccagca gcagctccgg cgcatggccg
     1681 agcagtcgct taccgaccac cggcgtgaac ggcaccgcca tctgcagctt gggataatag
     1741 tcacccccgg cacgctgcca cgcatcggcc cagccatggt cgaacacata ttcgccctgg
     1801 ct
//
LOCUS       DATAIQ010001140         2054 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_79766, whole genome shotgun sequence.
ACCESSION   DATAIQ010001140 DATAIQ010000000
VERSION     DATAIQ010001140.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2054
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_79766"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..374
                     /locus_tag="VHN20_18800"
     CDS             <1..374
                     /locus_tag="VHN20_18800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727877.1"
                     /translation="AWTKEAPVRAAEPTPPATAKYSDPTKRPNPLVTLLSDPTLRAGD
                     IVMFPDGPRVFRGHAGAKHASADFVKVSSAKDVPKSTRKALAAMSVGENSAWSSATTS
                     QVAQRGVDVETTGALPRRGRR"
     gene            complement(387..839)
                     /locus_tag="VHN20_18805"
     CDS             complement(387..839)
                     /locus_tag="VHN20_18805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727878.1"
                     /translation="MNSVRSAKVRDNRPPLQRAVARLATMRKHPATLIPEVTEVFAAI
                     EADDTYRRTMLTRALDHLETFVTRGTHERTALLEAYRPWADWYARSKMNLESLRRWFE
                     ADQSRECYLDPEDGDDAILQRAYAREAMSIYQLCLDLAQLMAEEPAAA"
     gene            994..1914
                     /locus_tag="VHN20_18810"
     CDS             994..1914
                     /locus_tag="VHN20_18810"
                     /inference="COORDINATES: protein motif:HMM:NF039905.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase family protein"
                     /protein_id="HEX2727879.1"
                     /translation="MRVTALVNAAAGTAERHGPDALRGTLADAFERQGLSVDLQFVPG
                     DQLREAAEAARGAAARGEIDAVAVGGGDGTISTVAAVLAGTGIPLAVLPLGTLNHFAK
                     DLGIPADLDAAVAVISPANMRAVDVASVNGEVFVNNSSIGIYPYMVVDRERRRSLHGQ
                     SKWVAMFWALLRGLRYFPLRRLSICAEGWAEPCRTPCVFVGNNEYCLDASSFGTRERL
                     NAGTLCLYVARQQSRPALLWLAFRSAIGLLDRKRDLRTFKSGSVDISSRTSRLLVALD
                     GEVLVMRSPLEYRVRPGALRVFAPGDGKAA"
BASE COUNT          300 a          696 c          732 g          326 t
ORIGIN      
        1 cggcgtggac caaggaggcg ccggtgcggg ccgccgagcc gacgccgccg gcgaccgcca
       61 aatattccga cccgacgaag cggccaaacc ccttggtcac tctgctgagc gacccgacct
      121 tgcgcgccgg cgacatcgtc atgttcccgg acggcccgcg cgtctttcgc gggcatgccg
      181 gcgcaaagca tgcctctgcc gatttcgtga aggtctcctc cgcgaaggac gtgccgaaat
      241 ccacgcgcaa ggcgctggcg gccatgtcgg ttggcgagaa cagcgcgtgg agctcggcca
      301 cgacctccca ggtggcgcag cgcggcgtcg acgttgagac gacgggggcg ctcccgcgcc
      361 ggggccggcg ctgaccgcgc gccgtatcag gccgccgcgg gctcctcggc catcagctgc
      421 gcgaggtcga ggcacaactg gtagatgctc atcgcctcgc gcgcgtaggc gcgctgcagg
      481 atggcgtcgt cgccgtcctc cggatcgaga tagcattcgc ggctctgatc ggcctcgaac
      541 cagcgccgca ggctctccag gttcatcttg ctgcgcgcat accagtcggc ccacgggcga
      601 taggcctcga gcagcgccgt gcgctcgtgg gtgccgcggg tgacgaaggt ctcgaggtga
      661 tcgagggcgc gcgtcagcat cgtgcgccga taggtgtcgt cggcctcgat ggcggcgaac
      721 acctcggtga cttccgggat cagggtggca gggtgcttgc gcatcgtcgc gaggcgggcg
      781 acggcacgtt gcagcggggg acggttgtcc cggaccttgg ccgaacgcac gctgttcatc
      841 cacacacccc ttcgccaggg atattccggg agattggtga aggaatcgtg cgcatcggcg
      901 ttatatgcag atgagagaag gaacctccgc ggccgtgccg gcgcctggcg cgctggcgcg
      961 gcgacgcacc ggcccatgcg cacggcgaat ccgatgagag tgacggccct cgtcaatgcc
     1021 gcggcgggca ccgcggaacg ccacgggccg gacgcgctca ggggcaccct ggccgacgcc
     1081 ttcgaacggc aaggactgtc ggtcgacctg caattcgtcc cgggcgatca gctgcgggag
     1141 gcggccgagg cggcgcgcgg cgcggccgcc cgcggcgaga tcgacgcggt cgcggtgggc
     1201 ggcggcgacg gcacgatcag cacggtcgcc gccgtcctcg ccggaaccgg tattccgctg
     1261 gccgtgctgc ccctgggcac gttgaaccat ttcgccaagg acctcgggat tccggccgat
     1321 ctcgacgcgg ccgttgcggt gatctcgccg gcgaacatgc gtgccgtcga cgtcgcctcc
     1381 gtcaatggcg aggtgttcgt gaacaattcg tcaatcggca tctatccgta catggtcgtc
     1441 gaccgcgagc gacgccggag tctgcacggc cagtcgaaat gggtggcgat gttctgggcg
     1501 ctgctgcgcg gcctcaggta ttttccgttg cgccggctgt cgatctgcgc cgaaggatgg
     1561 gccgagccgt gccgcacgcc ctgcgtgttc gtcggcaaca acgaatattg cctcgacgcg
     1621 tcctcgttcg gaacgcgcga gcggctgaac gccggcacct tgtgccttta tgtcgccagg
     1681 cagcaaagcc gcccggcgct gttgtggctg gccttccgct cggccatcgg cttgctcgac
     1741 cgcaagcgcg acctgcgcac cttcaagtcc ggctcggtcg acatcagctc gcgcaccagc
     1801 cgcctgctcg tcgccctcga cggcgaggtc ctggtgatgc gctcgccgct cgaataccgc
     1861 gtccggccag gcgccttgcg cgtcttcgct ccgggtgatg ggaaagccgc ctaatcctcg
     1921 aacggctcgc cggtggtgcg gcggccgacc atgaaggcgt cgccgacgag gcggaagggc
     1981 gcggcgtcga cctcggagcg gccggcgcgc aagagctcgt cgaagcgtgc gtagatggcc
     2041 tggtattcgg ccgg
//
LOCUS       DATAIQ010001141         2995 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_79957, whole genome shotgun sequence.
ACCESSION   DATAIQ010001141 DATAIQ010000000
VERSION     DATAIQ010001141.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2995)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2995)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2995
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_79957"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..948)
                     /gene="nuoF"
                     /locus_tag="VHN20_18815"
     CDS             complement(<1..948)
                     /gene="nuoF"
                     /locus_tag="VHN20_18815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016847754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoF"
                     /protein_id="HEX2727880.1"
                     /translation="MLADRDRIFTNLYGLHSPGLEAARKRGAWDGTKFLLEKGRDWII
                     DEMKKSGLRGRGGAGFPTGLKWSFMPKNSDGRPHYLVVNADESEPGTCKDREIMRHDP
                     HLLIEGCLFASFAMGAHACYIYIRGEYIREREALQRAVDEAYEARLIGKDNVHGYPFD
                     LYVHHGAGAYICGEETALLESLEGKKGMPRLKPPFPANMGLYGCPTTVNNVESIAVAG
                     TILRRGGAWFAGLGKPNNTGTKLFCVSGHVNKPCNVEEEMGITFRELIDRHCGGMRGG
                     WDNLLCSIPGGSSVPLVPAEQIIDAPMDFDTLRNLKSGLG"
     gene            complement(1048..2130)
                     /gene="nuoE"
                     /locus_tag="VHN20_18820"
     CDS             complement(1048..2130)
                     /gene="nuoE"
                     /locus_tag="VHN20_18820"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015930657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoE"
                     /protein_id="HEX2727881.1"
                     /translation="MAVRRLAPAEDQPQSFAFTAENERWVKAQIAKYPPGRQASAVIP
                     LLWRAQEQAGWVPQKAIEAIAEMLGMAYIRVLEVATFYTMFNLEPVGRHLVQLCGTVP
                     CHVKGAVDLRKVLERRIGEQQHVTNDGLFSWVEVECLGACCNAPMVQINADYYEDLTP
                     EILDRMLDDLAAGRPVKPGSQIGRVSSEPHGEVKTLTDQALFDGSVVGAWRKRFEEEA
                     IKEAGTGEAAAATASAPSAPKPAKPDAGRAIEREVADTPAKRVKEGERTPPSDKQQQA
                     SDPSRATAASAQARPEKVPSPQTEKSYTGTPSKQDEGRTTAAPKGVDPGAAGAPGRTP
                     RRDDTPAKPPGSDIPPEPGVPPTKRK"
     gene            complement(2130..>2995)
                     /locus_tag="VHN20_18825"
     CDS             complement(2130..>2995)
                     /locus_tag="VHN20_18825"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012334124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit D"
                     /protein_id="HEX2727882.1"
                     /translation="LSHLLNITTQAMDVGALTPPLWGFEEREKLMVFYERASGSRMHA
                     NYVRPGGVHQDLPADLIDDIEAFCDPFLKVCDDLDELVIGNRIFKQRNVDIGIVSLED
                     AWRWGFSGVMVRGSGAAWDLRKAQPYECYEELEFDIPVGRNCDNYDRQVIRMEEMRQS
                     IRIMKQCIAKLRAPEGQGPVLQRDGKVVPPKRADMKRSMEGLIQHFKLYTEGFHVPAG
                     EVYAAVEAPKGEFGVYLVADGTNKPYRCKIRAPGFAHLQAMDFMCRGHMLADVSAVLG
                     SLDIVFGEVDR"
BASE COUNT          456 a          992 c         1006 g          541 t
ORIGIN      
        1 gccgaggccg gacttcaagt tccgcagggt gtcgaagtcc atcggcgcgt cgatgatctg
       61 ctcggccggg accagcggca cggacgagcc gccgggaatc gagcacaaga gattgtccca
      121 gccgccgcgc atgccgccgc agtgccggtc gatcagctcg cggaaggtga tgcccatctc
      181 ctcttccacg ttgcagggct tgttgacgtg gccggagacg cagaagagct tggtgcccgt
      241 gttgttgggc ttgccgaggc ccgcgaacca ggcgccgccc cgccgcagga tcgtgcccgc
      301 gaccgcgatg gactcgacat tgttgaccgt cgtcgggcag ccgtagaggc ccatattggc
      361 cgggaacggc ggtttcaggc gcggcatgcc cttcttgccc tcgaggctct ccagcagggc
      421 cgtctcctcg ccgcagatat aggccccggc gccgtggtgg acgtagaggt cgaacgggta
      481 gccgtggaca ttgtccttgc cgatgagccg cgcctcatag gcctcgtcga cggcgcgctg
      541 cagcgcctcg cgctcgcgga tatattcgcc gcggatgtag atgtaacagg catgcgcgcc
      601 catcgcgaag gaggcgaaca ggcagccttc gatcaggaga tgcgggtcgt gccgcatgat
      661 ctcccggtcc ttgcacgtgc cgggttccga ttcgtcggcg ttgacgacga ggtaatgcgg
      721 gcgcccgtcc gagttcttgg gcatgaacga ccacttgagc ccggtcggga agccggcgcc
      781 gccgcggccg cgcaggcccg acttcttcat ctcatcgatg atccagtcgc ggcccttctc
      841 gagcaggaac ttggtaccgt cccaagcgcc gcgcttacgc gcggcctcga gccccggcga
      901 atgcaggccg tagaggttcg taaagatccg atctcgatca gctagcatgt cagcgtgggc
      961 tccaggacat ggatcctcgg gtgaagcccg gggacgcttc gctttgctcg caatgggtga
     1021 aaatgcagtt gcggacggcg ggcatgacta tttgcgtttc gtcgggggaa cgccgggctc
     1081 cggcggaatg tccgagccgg gaggcttggc gggagtgtcg tcgcgccgcg gcgtgcggcc
     1141 cggcgcaccc gccgcacccg gatcgacgcc tttcggagca gccgtcgtgc ggccctcgtc
     1201 ctgcttgctt ggcgtgccag tatacgactt ttcggtctgg ggcgatggca ccttctcggg
     1261 ccgcgcctgc gccgacgctg ccgtcgcacg cgacggatcg gacgcctgct gctgcttgtc
     1321 ggacggcggg gtgcgttcgc cttccttgac gcgcttcgcg ggcgtgtcgg cgacctcgcg
     1381 ctcgatggca cggccggcgt cgggcttggc cggtttcggc gccgacggcg cactcgccgt
     1441 ggcggccgcc gcctcgccgg ttcccgcttc cttgatcgct tcctcctcga aacgcttgcg
     1501 ccaggcgccg accacggagc cgtcgaacag ggcctgatcc gtcagcgtct tcacctcgcc
     1561 atgcggctca gacgagacgc gcccgatttg cgagccgggt ttcaccggcc gcccggccgc
     1621 cagatcgtcg agcatcctgt cgaggatctc gggcgtcagg tcctcgtaat agtcggcatt
     1681 gatctgcacc atcggcgcgt tgcagcaggc gccgagacat tcgacctcga cccaggagaa
     1741 caggccgtcg ttggtcacgt gttgctgctc gccgatgcgg cgttccagca ccttcctgag
     1801 gtcgaccgcg cccttcacgt ggcacggcac ggtgccgcac agctgcacga gatggcgccc
     1861 gaccggctcg aggttgaaca tcgtgtagaa ggtcgcgacc tcgagcacgc ggatgtaggc
     1921 catgccgagc atctcggcga tggcctcgat cgccttctgc ggcacccagc ccgcctgctc
     1981 ctgggcgcgc cacaagaggg ggatgaccgc cgacgcctgc cgtcccggcg gatatttggc
     2041 gatctgggct ttcacccagc gctcgttctc cgccgtgaag gcgaagcttt gcggctggtc
     2101 ttcggcggga gcgagcctgc gaacggccat tagcggtcaa cctccccgaa cacgatatcg
     2161 agcgagccaa gcacggccga gacatccgcc agcatgtggc cgcggcacat gaaatccatt
     2221 gcctgcagat gcgcgaagcc cggggcgcgg atcttgcagc gatacggctt gttggtgccg
     2281 tccgcgacga gatagacgcc gaactcgcct ttcggcgcct cgacggcggc atagacctcg
     2341 ccggccggca cgtggaagcc ttcggtgtag agcttgaagt gctggatcag cccttccatc
     2401 gaacgtttca tgtcggcgcg cttgggcggc acgaccttgc cgtcgcgctg cagcacgggc
     2461 ccctgccctt ccggcgcgcg cagcttggcg atgcactgct tcatgatgcg gatcgactgc
     2521 cgcatctcct ccatgcggat gacctggcga tcgtagttgt cacagttcct gccgaccggg
     2581 atgtcgaact cgagctcctc gtagcactcg tagggctgcg ccttgcgcag gtcccacgcg
     2641 gcgcccgagc cgcggaccat gacgccggaa aagccccagc gccacgcgtc ttcgagcgac
     2701 acgatgccga tgtcgacgtt gcgctgtttg aagatgcggt tgccgatgac gagttcgtcg
     2761 aggtcgtcgc agaccttcag gaacgggtcg cagaacgcct caatgtcgtc gatcaggtcg
     2821 gccggcagat cctggtgcac gccgccgggg cgcacgtagt tggcgtgcat gcgcgagccc
     2881 gaggcgcgct catagaacac catgagtttc tcgcgttcct cgaagcccca cagtggcggc
     2941 gtcaatgcac cgacgtccat cgcttgcgtg gtgatgttga ggaggtgcga gagca
//
LOCUS       DATAIQ010001142         7665 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_80106, whole genome shotgun sequence.
ACCESSION   DATAIQ010001142 DATAIQ010000000
VERSION     DATAIQ010001142.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 7665)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7665)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7665
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_80106"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1240)
                     /locus_tag="VHN20_18830"
     CDS             complement(<1..1240)
                     /locus_tag="VHN20_18830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HEX2727883.1"
                     /translation="MASKPRRRTPETLRSRLWFDNPDNPGMTALYLERYLNYGLTREE
                     LQSGKPIIGIAQTGSDLSPCNRHHIELAKRIRDGITAAGGIAFEFPVHPIQETGKRPT
                     AALDRNLAYLGLVEVLYGYPLDGVVLTTGCDKTTPACLMAAATVDLPAIALNVGPMLN
                     GWHHGERTGSGTVVWKARERHAAGDIDYAQFMDIVGSSAPSVGHCNTMGTASTMNALA
                     EALGMSLPGSASIPAPYRERGQVAYETGKRIVEMVWEDLTPAKLLTRRNFENAITVAM
                     AEGCSTNAIIHLVAMSRRMGGDCTITLDDFDAFSRKVPVLANIRPSGDRYLMEDFYYA
                     GGLRGLMKTLADGGLLHLDAPTVSGRTVGENLADAEVHDRDVIRPLDHPIYHEGALAV
                     LRGNLAPAGCVIKPSACSPHL"
     gene            1518..2699
                     /locus_tag="VHN20_18835"
     CDS             1518..2699
                     /locus_tag="VHN20_18835"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HEX2727884.1"
                     /translation="MLHVVPAFGRIGEENAFAVLARATELAARGRDIINLGIGQPDFP
                     TPPHIVEAAIKALRDGHHGYTPATGILPLREAVAADLHRRLSVEVSPDSVMILPGGKV
                     TMFMAILMFGAPGVEILYPDPGFPIYRSMIEFTGATPVPVPIRERNGFAFSAEETLAL
                     ITPKTRLLILNSPANPTGGVTPKVEIDRLVAGLARHPDVAVMSDEIYGTMTYDGEAHV
                     SLLRYPDIRDRLVYLDGASKTYAMTGWRLGWSVWPKPLYDAARKLAVNSYSCVNAATQ
                     WAGIAALEGPQDCVAAMVAEFDRRRAIVVEGCNKLPGVSCITPKGAFYAFPNIQKTGW
                     QAKALASALLEDAGVATIGGPDFGVHGEGYIRLSYANSAENILRALDRMGEFLESRKA
                     A"
     gene            complement(2743..3531)
                     /locus_tag="VHN20_18840"
     CDS             complement(2743..3531)
                     /locus_tag="VHN20_18840"
                     /inference="COORDINATES: protein motif:HMM:NF016291.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tellurite resistance TerB family protein"
                     /protein_id="HEX2727885.1"
                     /translation="MFDARRLLDALLGATAGPAAQRSAGYGQGQTVVSAVLHEFLRPR
                     ADARQGAYVERAKDFLRRHPVLAEAAITTVGGMLMTAGKRRALALGAARLGGLARFGG
                     LALVAGLAYTAYQTYQAGKARAGQGDGGRRHASPLAFDPASLTEDDALLYARAMIAAV
                     SADGRVADRERERILKTVSQAGIDPEMSHWLRDELEAPLTVDELADAADTPEKGARIY
                     AAARLAIDPDTLQEREFLRELGQLLDLDPQLVRHIDDAAAGARV"
     gene            complement(3617..6751)
                     /locus_tag="VHN20_18845"
     CDS             complement(3617..6751)
                     /locus_tag="VHN20_18845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018430060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX2727886.1"
                     /translation="MINTLVDLAISRARLTMVVLAFLFVAGFSAYLSIPKEAEPDVKI
                     PLIYVSLTQRGISPEDAERLLLRPVETQLKAITNVKEMRGASFEGGGYVLLEFDAGFD
                     STKALADVRAKVDDAKRDLPRDADEPKVQEVNLSLFPILVVSLGGDLPERTLVRLART
                     VKTAIEQTPGVLSAELRGARDEAVEIIVEPMLLKSYGVSLDDLIRSIGAGNSLVAAGA
                     LEGGTGRFAIKVPALIEHPEDVLKLPVAASSGASVTLGDVAEVRPTFKDAVSITRING
                     KPAIAVEVVKRTGANIIETVDAVKATVERLAPGLPATLQITFQQDRSTHIRTMLNDLQ
                     NSVVTGLLLVAMIMLYTLGWRASLFIGLAVPGSFLAGILALSLSGLTVNIVVLFTLIL
                     AIGELVDNAIIVTEYAERRMAEGMRPREAYALAAKRMAAPCFAATATRLVTFSPLLFW
                     PGIVGQFMKYLPITFMATLIASLVFALVFTPTLGALIAKPNPSADADGERVGERSPYL
                     RVVRAAIASPGVTLVITLATLVSVFAAYARFGNGVEFFPSVEPDYGLVHVRARGNLSL
                     DEKDRLVREVERVLFEMPEIAKIYARVGERQRGSDEVPEDTIGSVQYEFIDWQQRRRA
                     GVIMDEIRARTAHLPGVIIEVAAPRAGPPTGKPVTLRLAAPEPTMLQPAAKQVADLLR
                     AIPELRDVDDGQPLPGIDWRLEVDKSEAAKYGASALTVGNAVQLVTNGLKVTEFRPNE
                     TDKQVDILLRFPPERRSLNELDDLRINTPAGAVPIGNFVERVPEQRVSILHRAQGARV
                     MTVTANVAEGVQTAAVQKKVVNALSQLKLPAGVTFQLKGEDEEREKAQGFLSKAFGTA
                     VFLIFATLLAQFNRFSSVLMIMSAVVFSTVGVLIGLLITGHAFGVVMTGLGIISIAGI
                     IVNNNIVLIDTYDQLRREGWGARDAILESCAQRARPVFLTAITSVLGVMPIAFGINIE
                     FLEREVTVGAPSTQWWVQLSTATVFGIGFATVLTLIITPAMLMGAANIAAWRRRRRVR
                     RVQVPAGAQVVPAE"
     gene            complement(6761..>7665)
                     /locus_tag="VHN20_18850"
     CDS             complement(6761..>7665)
                     /locus_tag="VHN20_18850"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX2727887.1"
                     /translation="RRIVLSGRTEADKRAVAMARAAGVIQELRVRRGSQVKKGEVIAV
                     LSDEAREAHVMQAQARLVQRRVELQARLKLIEQGNLPALQRPQLEAEMKAAEAALAAA
                     EAERLKGEVLAPISGIVNDVPVEVGQALQANANVAEVIASDPMLAVAEIAERQLGGVK
                     VGDPAQVRLVTGMKAEGTVRFISQKASQQTRTYRIEIALANLHGDIPDGVTAEVALSL
                     APVPATRVPRSALTFSSEGKLGVRIVTADGTVAFVPVGLIEDGPGTLWVSGIAPGSRL
                     IVQGQDFVREGVKVDAVPFGGAAS"
BASE COUNT         1175 a         2652 c         2618 g         1220 t
ORIGIN      
        1 gcaggtgtgg gctgcaggcg ctgggcttga tgacgcagcc ggcgggcgcc aggttgcccc
       61 gcagcacggc cagcgcgccc tcgtggtaga tcgggtggtc cagcggtcgg atcacgtcgc
      121 ggtcgtgcac ctcggcatcc gcgaggttct cgcccaccgt gcggccgctg accgtgggcg
      181 cgtccaggtg cagcaggccg ccgtccgcca gcgtcttcat caggccgcgc agcccgccgg
      241 cgtagtagaa gtcctccatc aggtaccggt ccccgctcgg gcggatgttg gccagcaccg
      301 gcaccttgcg cgagaacgcg tcgaagtcgt cgagcgtgat ggtgcagtcg ccgcccatgc
      361 gccgcgacat cgccaccagg tggatgatgg cgttggtgga acagccctcg gccatggcga
      421 ccgtgatcgc attctcgaag ttgcggcggg tgagcagttt cgcgggcgtg aggtcctccc
      481 acaccatctc gacgatgcgc ttgccggtct cgtaggcgac ctgcccgcgc tcacgatacg
      541 gcgccgggat cgacgcggag ccgggcagcg acatgccgag cgcctcggcg agcgcgttca
      601 tggtcgaggc cgtgcccatg gtgttgcagt ggcctaccga cggcgccgac gagccgacga
      661 tgtccatgaa ctgggcgtag tcgatatcgc cggcggcgtg gcgctcgcgc gccttccaca
      721 cgaccgtgcc ggagccggtg cgctcgccgt ggtgccaccc gttgagcatc ggcccgacat
      781 tgagcgcgat cgccggcaga tcgacggtcg cggccgccat caggcaggcg ggcgtggtct
      841 tgtcgcagcc cgtcgtgagc acgaccccgt cgagcgggta gccatagagc acctcgacca
      901 ggcccagata ggcgaggttg cggtcgagcg cggccgtggg gcgcttgccg gtctcctgga
      961 tcgggtgcac ggggaactcg aaggcaatcc cgcccgccgc cgtgatgccg tcgcggatgc
     1021 gcttggccaa ctcgatatgg tggcggttgc acggcgagag gtcggacccg gtctgggcga
     1081 tgccgatgat cggcttgccc gactgcagct cctcgcgcgt cagcccgtaa ttgaggtagc
     1141 gctcgaggta gagcgccgtc attcccgggt tgtcgggatt gtcgaaccac aggcgcgagc
     1201 gaagggtttc gggcgtgcgc cgccgcggct tgctggccat gcttgtttct ccccggcgcg
     1261 cgcggcgccg tttgatgtgt cgcgaaaatg gaccgcggcg gcgggtgaat caactgcatt
     1321 gcgggcccgc gtccgttgcg gcccatggcc acgcgcgaga gccacgcaca tggaatcggc
     1381 ccttagccat atggccttct tcggcgaacc ggccacttcg ccggaaaatg cgcgaacggc
     1441 cacgtttgac ttggccgccg ccatcggact gaatgcgcgc gaaaatgacc cgctgcgaag
     1501 cgacgaggga aacgcccatg ctgcatgttg tgcccgcctt cgggcggatc ggggaagaga
     1561 acgcttttgc ggtgctggca cgggccaccg agcttgccgc gcgcgggcgg gacatcatca
     1621 atctcggcat cggccagcct gattttccga cgcccccgca catcgtcgag gcggccatca
     1681 aggccctgcg cgacggccac cacggctaca cgccggcgac cggcatcctg cccttgcgcg
     1741 aggcggtggc cgccgacctg caccggcgcc tctccgtcga ggtctcgccc gacagcgtga
     1801 tgatcctgcc cggcggcaag gtcacgatgt tcatggccat cctgatgttc ggcgccccgg
     1861 gcgtcgagat cctgtatccg gacccaggct tcccgatcta ccgctcgatg atcgagttca
     1921 cgggcgcgac gccggtgccg gtgccgatcc gcgagcgcaa cggcttcgcc ttctcggccg
     1981 aggagacgct ggcgctgatc acgccgaaga cgcgcctcct gatcctcaac tcgcccgcca
     2041 acccgacggg cggcgtcacg cccaaggtcg agatcgacag gctcgtggcc ggcctcgcgc
     2101 gccatcccga cgtggccgtc atgtcggacg agatttacgg caccatgacc tacgacggcg
     2161 aggcccacgt ttcgctgttg cgctatccgg acatccgcga tcgtctggtc tatctcgacg
     2221 gcgcctccaa gacctacgcc atgaccggct ggcgtctcgg ctggtcggtg tggccgaagc
     2281 cgctctacga cgcggcccgc aagctcgccg tcaattccta ttcctgcgtc aacgcggcga
     2341 cgcaatgggc cggcatcgcc gcgctcgagg gcccgcagga ctgcgtcgcc gcgatggtgg
     2401 cggagttcga ccgccgccgc gccatcgtgg tcgagggctg caacaagctg ccgggcgtgt
     2461 cctgcatcac tcccaagggc gccttctacg ccttccccaa catccagaag accggctggc
     2521 aggccaaggc gctcgcctcc gcgctgctcg aagatgccgg cgtcgccacc atcggcgggc
     2581 cggatttcgg cgtgcacggc gaaggttata tccgcctctc ctacgccaac tcggccgaga
     2641 acatcctgcg cgccctcgac cgcatgggcg agttcctgga gagccgcaag gccgcgtgac
     2701 ctttcccttg atgggaaggt cgagccggcg cgaagaggga gattataccc tcgcgccggc
     2761 ggccgcgtcg tcgatatgcc tgacgagctg cgggtcgagg tcgagcagtt gcccgagctc
     2821 gcgcaggaac tcgcgctcct ggagggtgtc ggggtcgatg gcgaggcggg cggcggcgta
     2881 gatcctggcg cccttctcgg gcgtgtccgc cgcatcggcg agctcgtcga cggtcaacgg
     2941 cgcctccagc tcgtcgcgaa gccagtgcga catctccgga tcgatgccgg cctgcgacac
     3001 ggttttgagg atgcgctcgc gctcccggtc ggcaacacgg ccgtccgcgc tcaccgccgc
     3061 gatcatggcg cgcgcgtaga gaagcgcgtc gtcctcggtc agcgatgccg gatcgaacgc
     3121 caggggactg gcgtgtcgcc gccccccgtc gccctgcccg gcacgcgcct tgccggcctg
     3181 gtaggtctgg taggccgtat aggcgagccc agcgaccaga gcgaggccgc cgaaccgggc
     3241 caggccgccg agccgtgcgg cgccgagcgc cagggctctt cgcttcccgg cggtcatcag
     3301 catgcccccg acggtcgtga tcgccgcctc ggcgagcacc ggatgacgcc tcaggaaatc
     3361 ctttgccctt tccacgtagg cgccctggcg agcatcagcc ctcggccgaa gaaactcgtg
     3421 cagaaccgcg gacacgacgg tctgcccttg cccatagcct gcgcttcgct gcgcggcagg
     3481 cccggcggtc gcgcccagca atgcgtccag caaccgtctt gcgtcgaaca tggaaacgcc
     3541 ctcgcctcat cccggtcaag gacataacga ggcgcggcgg gctttggttc agcacacgct
     3601 cgcccgtccc gctgtcctat tcggccggca cgacttgcgc gcccgcaggc acttgcaccc
     3661 ggcgcacacg ccggcgcctg cgccaggcgg cgatgttggc cgcgcccatc agcatcgccg
     3721 gggtgatgat cagcgtcagc accgtcgcga agccgatgcc gaacaccgtc gcggtcgaga
     3781 gctgcaccca ccattgcgtc gacggcgcac caacggtgac ctcgcgctcg agaaactcga
     3841 tgttgatgcc gaaggcgatc ggcatgacgc ccagcacact cgtgatcgcc gtgaggaaca
     3901 cgggccgtgc ccgctgcgcg cagctttcga ggatggcgtc gcgcgccccc cagccctccc
     3961 ggcgcagctg atcataggtg tcgatcagca cgatgttgtt gttgacgatg attccggcga
     4021 tcgagatgat ccccagtccc gtcatcacca cgccgaaagc gtggccggtg atgagcaacc
     4081 cgatgagcac gccgaccgtc gagaacacga cggcgctcat gatcatgagc acgctcgaga
     4141 agcggttgaa ctgcgcgagt aaggtggcga atatcaggaa caccgccgtg ccgaacgcct
     4201 tggataggaa cccttgcgcc ttctcgcgct cctcgtcctc ccccttgagc tgaaaggtca
     4261 cgcccgccgg cagtttgagc tgcgacaatg cgttgacgac cttcttttgc acggcggcgg
     4321 tttgcacgcc ctcggcgaca ttcgccgtca ccgtcatcac gcgcgcgccc tgcgcgcgat
     4381 gcaggatcga aacgcgctgc tccggcacgc gctcgacgaa attgccgatc ggcaccgctc
     4441 ccgccggcgt attgatgcgc aggtcgtcga gctcgttcag gctgcgccgc tcgggcggga
     4501 agcgcaggag gatgtcgacc tgcttgtcgg tttcgttcgg ccggaactcg gtcaccttga
     4561 ggccgttcgt gacgagctgc accgcgttgc cgacagtgag cgcgctggcg ccgtatttgg
     4621 cggcttcgga tttgtcgacc tcgagccgcc agtcgatgcc gggcagcggc tggccgtcgt
     4681 ccacgtcgcg caattcgggg atggcgcgca gcaggtcagc gacctgcttg gccgccggct
     4741 gcagcatcgt cggctccggg gccgctagtc gcagcgtcac gggcttgccg gtcggcggcc
     4801 cggcgcgcgg cgccgccacc tcgatgatca caccgggcag gtgcgcggtg cgcgcacgga
     4861 tctcgtccat gatcacgccc gctcgccggc gctgctgcca gtcgatgaac tcgtattgca
     4921 cggagccgat cgtgtcttcc ggcacctcgt cggacccgcg ctggcgctcg ccgacccggg
     4981 catagatctt ggcgatctcc ggcatctcga aaaggacccg ctcgacttcc ctgaccagcc
     5041 ggtccttctc gtcgagcgaa agattgccgc gggcgcgcac atgcacgagc ccgtagtccg
     5101 gctcgacgct cgggaagaac tcgacgccgt tgccgaagcg cgcataggcg gcgaacacgc
     5161 tgacgagggt cgcgagggtg atcacgagcg tcaccccggg gctggcgatg gcggctctga
     5221 cgacccggag gtaaggcgag cgctcgccga cgcgctcgcc atccgcgtcc gccgacgggt
     5281 tcggcttggc gatcagcgcg ccgagcgtcg gcgtgaagac gagggcgaat accagcgagg
     5341 cgatcagcgt cgccatgaag gtgatcggca ggtatttcat gaactggccg acgatgcccg
     5401 gccagaacag cagcggcgag aaggtcacga gccgcgtcgc ggtcgccgcg aagcacggcg
     5461 ccgccatgcg cttggccgcc agcgcgtagg cttcgcgcgg gcgcatgcct tccgccatgc
     5521 gccgctcggc atattcggtc acgatgatgg cgttgtcgac cagctcgccg atggcgagga
     5581 tcagcgtgaa cagcaccacg atgttgaccg tgaggccgga cagcgaaagg gccaggatgc
     5641 ccgccaggaa cgaccccgga accgccagcc cgatgaacag cgaggcgcgc catccgagcg
     5701 tgtagagcat gatcatggcg accagcagaa gcccggtcac caccgagttc tgcaggtcgt
     5761 tgagcatggt gcggatatgc gtcgagcggt cctgctggaa cgtgatctgc agcgtcgccg
     5821 gcaagcccgg cgcgagccgc tcgacggtgg ccttcaccgc atcgaccgtc tcgatgatgt
     5881 tggcgccggt gcgcttgacg acctcgacgg cgatcgccgg cttgccgttg atgcgcgtga
     5941 tcgagacggc gtccttgaat gtcgggcgca cctcggcgac gtcgcccagg gtgacggagg
     6001 cgccgctcga ggccgccacc ggcagcttga ggacatcctc cggatgctcg atcagggcgg
     6061 gcaccttgat ggcgaagcga ccggttccgc cctcgagagc gccggccgcg acgaggctgt
     6121 tgccggcgcc gatggaccgg atcaggtcat cgagcgacac gccgtagctc ttcagaagca
     6181 tgggctcgac gatgatctcg acggcctcgt cgcgggcgcc gcggagctcc gccgagagca
     6241 cgcccggggt ctgctcgatc gccgtcttca ccgtgcgcgc gaggcgcacg agcgtgcgtt
     6301 cgggcagatc gccgccgagg gagacgacga ggatcgggaa cagtgaaagg tttacttcct
     6361 ggaccttggg ctcgtcggcg tcgcgcggca gatcgcgttt ggcgtcgtct acttttgcgc
     6421 gcacgtcggc gagcgccttg gtggagtcga agccggcatc gaactcgagc agcacgtagc
     6481 cgccgccctc gaacgaggcg ccgcgcattt ccttgacgtt cgtgatcgcc ttgagctgcg
     6541 tctcgaccgg gcgcagcagc agccgttcgg cgtcctccgg gctgatgccg cgctgcgtga
     6601 gcgagacgta gatgagcggg atcttgacgt ccggctcggc ctccttggga atcgacagat
     6661 aggccgagaa gcccgccacg aacaggaagg cgagcacgac catggtcagg cgtgcgcgcg
     6721 agatcgccag atcgaccaga gtgttgatca tcgttatcgc ctagctcgcg gccccgccga
     6781 acggcaccgc gtccaccttc acgccttcgc gcacgaaatc ctggccctgc acgatcagcc
     6841 gcgacccggg cgcgatgccg gacacccaca gcgtcccggg cccatcctcg atcagcccga
     6901 ccggcacgaa cgcgaccgtg ccgtcggcgg tcacgatgcg gacgccgagc ttgccctccg
     6961 acgagaaggt caaggcggag cggggcacgc gcgtcgcggg caccggcgcc agcgacaggg
     7021 cgacctcggc cgtgacgccg tccgggatgt cgccgtgcag gttggcgagc gcgatctcga
     7081 tccgataggt gcgcgtctgc tggctcgcct tctgcgagat gaagcgcacg gtgccttccg
     7141 ccttcatccc ggtcacgagc cgcacctgcg cgggatcgcc gaccttgacg ccgccgagct
     7201 gccgctcggc gatctcggcg accgccagca tgggatcgga cgcgatcacc tcggccacat
     7261 tggcgttggc ctgcagggcc tgtccgactt ccaccggcac gtcgttcacg attcccgaga
     7321 tcggcgcgag gacctcgccc ttgaggcgct cggcttcggc ggcggcgagc gccgcctcgg
     7381 cggccttcat ctcggcttcg agctgcgggc gttgcagcgc cggcaagttg ccctgctcga
     7441 tcagcttgag gcgggcctga agctccacgc ggcgctgcac gaggcgcgcc tgggcctgca
     7501 tgacgtgggc ctcgcgcgcc tcgtcggaga gcacggcgat cacctcgccc ttcttgacct
     7561 gcgagccgcg ccgcaccctg agctcctgga tcacgccggc ggcgcgcgcc atggcgacgg
     7621 cgcgcttgtc ggcctcggtg cggccggaga gcacgatgcg ccgcg
//
LOCUS       DATAIQ010001143         1815 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_172051, whole genome shotgun sequence.
ACCESSION   DATAIQ010001143 DATAIQ010000000
VERSION     DATAIQ010001143.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1815)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1815)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1815
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_172051"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            176..>1815
                     /locus_tag="VHN20_18855"
     CDS             176..>1815
                     /locus_tag="VHN20_18855"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX2727888.1"
                     /translation="MVDDDERNLLALGQVLEGLADVVTATSGREALRHLLEGEFAVIL
                     LDVFMPGMDGYETAQLIRQRKQTARIPIIFLSAVNKETEHLMRGYAMGAVDYVFKPVD
                     AVILQSKVKVFVDLFRMRVEVEEKRRREQMLLDANLKAKSEKLKVERELRLAEQRQAA
                     IIQSLPIVLYLEPVGQKPRRPSFVGENLNRVTGYTKEDVAGAEDFWESRLHAEDRDRV
                     LAELERRREAGGWSIHYRWRCADGNYRHLHDQAVLILSRDGRPVEYAGSLFDISERRE
                     LESQLLQAQKMDAIGQLTGGVAHDFNNLLASILGGLHLLQRRLTLGDRDRLVLDQMRH
                     AAEQGAELVRRMMAFARKQDLSPTSVDPRGLCESVAGLVAPTLGGRVKVEWDCPRSER
                     YLFVDRSQLELALVNLIINARDAMPDGGMVRVSIGEQACDNDGEPMVRIKVVDEGLGI
                     HGEIIDRVTEPFFTTKEVGKGTGLGLSMVAGFVEQSGGRFTVASDRSGTSVEMLLPST
                     DERPRSVPAGELALRAANGLTVLLVDDDEAVRTVIAEQ"
BASE COUNT          316 a          575 c          602 g          322 t
ORIGIN      
        1 caagccggtc gacatcgatc tcctgctcgc gctaatgcgc gtctgggttg gtcgcgtccg
       61 ggccgaccgc gcatcggccg tggccggctc atcacaggct gcctgaccga tgccaaggcg
      121 cgctccgacc ggtgtctcgg attccgttac gggcggcagt cccgcgcgaa tcctgttggt
      181 cgacgacgac gagcgcaatc tgctcgccct tgggcaggtg ctcgaaggac tcgccgatgt
      241 cgtgacggcg acctcggggc gtgaggcctt gcgccacctg ttggagggcg aattcgccgt
      301 catcctgctc gacgtcttca tgcctggcat ggacggctac gagaccgctc agttgattcg
      361 ccaacgcaag cagaccgcgc gcatcccgat catcttcctg tcggccgtca acaaggagac
      421 cgagcacctg atgcgcggct atgcgatggg cgccgtcgac tatgtcttca agccggtcga
      481 tgcagtgatc ctccagtcga aggtcaaggt gttcgtcgat cttttccgga tgcgcgtcga
      541 ggtcgaggaa aagcgccgcc gcgagcagat gctgctcgac gcaaacctca aggccaagtc
      601 cgaaaagctg aaagtcgagc gcgagttgcg cctggccgag caacgtcagg cggcgatcat
      661 tcagtcgttg ccgatcgtgc tttacctcga gccggtaggc cagaagcctc ggcgcccatc
      721 gttcgtcggc gaaaacctga atcgcgtcac cggctacacc aaggaagatg tcgcgggagc
      781 cgaggatttc tgggaaagcc ggctccatgc cgaggaccgc gatcgggtgc ttgccgagct
      841 cgaacgccgc cgcgaagccg gcggctggtc gatccactat cgctggcgct gcgccgacgg
      901 caattatcgc cacctccacg accaggccgt gctaatcctc tcgcgggacg gcaggccggt
      961 ggaatatgcc gggtcgctgt tcgacatcag tgaacgccgc gaactcgaga gccagctgct
     1021 gcaggcccag aaaatggacg cgatcggcca gcttaccggc ggggtcgcgc acgatttcaa
     1081 caatttgctg gcatcgatcc tcggcgggct ccacctcctc cagcggcgct tgacgctggg
     1141 tgaccgcgac cgccttgttc tcgatcagat gcgccatgcc gccgaacagg gcgcggaact
     1201 ggttcgaagg atgatggcct tcgcacgcaa gcaggacctg tccccgacca gcgtcgatcc
     1261 gcgcggcctg tgcgaatcgg tcgccggact ggtcgccccg acgctcggag gaagggtcaa
     1321 ggtcgaatgg gactgtccgc gcagcgagcg gtacctgttc gtcgaccgct cccagctcga
     1381 gctcgcgttg gtcaatctca ttatcaacgc ccgagacgcg atgcccgacg gcggcatggt
     1441 gcgggtgtcg atcggcgagc aggcctgcga caacgatggc gagccgatgg tccgcatcaa
     1501 ggtcgtcgac gaagggctcg gcatccacgg cgagattatc gaccgggtga ccgagccgtt
     1561 tttcaccacc aaggaggtgg gcaagggcac gggccttggg ctgtcgatgg tcgccggctt
     1621 cgtcgagcag tcgggcgggc gcttcacggt tgccagcgac cgttcgggca cgagcgtcga
     1681 gatgctgttg ccgtcgacgg acgaacggcc gcgttcggtt ccagccgggg agcttgccct
     1741 gcgcgccgca aacggactta cggtcttgtt ggtcgacgat gacgaagcgg tccgtaccgt
     1801 cattgcggag cagtt
//
LOCUS       DATAIQ010001144         2328 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_172253, whole genome shotgun sequence.
ACCESSION   DATAIQ010001144 DATAIQ010000000
VERSION     DATAIQ010001144.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2328)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2328)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2328
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_172253"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(162..611)
                     /locus_tag="VHN20_18860"
     CDS             complement(162..611)
                     /locus_tag="VHN20_18860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007694453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727889.1"
                     /translation="MSLWSTGRALLAAAVLAAASGLALSPAQADSGRIQFTVVKAGLV
                     IGGSGGSGSLTFRGRRYPLSIGGLSYGFTFGASQTDFRGTVTNIRRPQDVEGVYAAGS
                     AGAALGRGAQAIVLTNQNGAMLTLTGRSVGAIVSADLNGLALSLQRY"
     gene            1294..1494
                     /locus_tag="VHN20_18865"
     CDS             1294..1494
                     /locus_tag="VHN20_18865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727890.1"
                     /translation="MTAFTAAQIEWTLDWLKETVCAMNITQDPAPEQPQAITGNVLKC
                     GADTTLIATTGEQAATDKPYAL"
     gene            1552..1749
                     /locus_tag="VHN20_18870"
     CDS             1552..1749
                     /locus_tag="VHN20_18870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727891.1"
                     /translation="MVWERRKRDTNIMFAVTYDNGQSAYVTISPKKLQHGDHLVRQLL
                     REHQEQGSIPNGQIASVKRVR"
     gene            complement(1933..>2328)
                     /locus_tag="VHN20_18875"
     CDS             complement(1933..>2328)
                     /locus_tag="VHN20_18875"
                     /EC_number="2.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009492144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0018104 - peptidoglycan-protein
                     cross-linking [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HEX2727892.1"
                     /translation="GTVIVSTKERRLYYVLPDGKAVRYGIGVGRQGFQWSGTETVTRK
                     REWPDWRPPKAMLRRRPDLPRYMSGGIGNPLGARAMYLGSSEYRIHGSNEPWTIGHAV
                     SSGCIRMTNTDVIDLYKRVAIGTTVVVLR"
BASE COUNT          435 a          727 c          789 g          377 t
ORIGIN      
        1 ttgccggcga cggtgcgaaa gcggccaaga agagcgaggg cgagccgggc ccggacagcc
       61 ccctcggatg ctttggcgcc ctctccggcg tccacgttcg agaggactgc atccgggctt
      121 gaacggccga aggcgcatag cgaccggcag gatcgggatt ttcagtagcg ctgcagcgac
      181 agcgcgaggc cgttgaggtc ggccgagacg atggcgccga cggagcggcc cgtgagggtg
      241 agcatggcgc cgttctggtt ggtcaaaacg atcgcctgcg cgccgcggcc gagcgcggcg
      301 cccgccgaac cggccgcgta gacgccttcg acatcctgcg gccggcggat gttggtgacg
      361 gtgccgcgga aatcggtctg cgaggcgccg aaggtgaagc catagctgag cccgccgatc
      421 gaaagcggat agcgccggcc cctgaaggtc agcgagccgc tgccgccgga gccgccgatg
      481 acaaggcccg ccttgaccac ggtgaactgg atgcggccgc tgtcggcctg cgcgggcgag
      541 agcgcgaggc ccgaggcagc ggcgagcacg gcggctgcga gcagggcgcg gcccgttgac
      601 caaagcgaca tgagacgaat ctccggatga ctgcaccggg tataaccggc ggcccgtctc
      661 gccgttccct ccggcaacgc cgcgtgggcc gcttggccgc ggggagcgcg catgcgcgtc
      721 accgcgaagg cgcgacgcgc gtaagatgcc ggaaaaaacg acagccctgc gacaaacgaa
      781 attcttcccg atcggcggct ggggagggag ttcgagcggg ccggcagagc atgagccgcc
      841 gaaagcctgc ccccgggacc cgatccgggg gtggtaccgc ttcgccgcaa aaggcttgtc
      901 ccggacctga tccggggctt gtcccggacc tgatccgggg cttgtcccgg acttgatccg
      961 gggcttgtcc cggacttgat ccgggatcat gcggttcatc aagagcggga tcgatacgat
     1021 ctgaattgat cgcggcgcca ggcaactatt cgcccacctt tacgatcatg cggtcggacg
     1081 ttgacgttgt tttcatcagg aacgcgcctc cgttcatcct gtgctgaaat tgtcatagtt
     1141 tcccacatag ccgcctgttt tctccaactg cgattgctgc tcagtggcca tgagtgctca
     1201 atgcgtttga caacacgtgc attggcgaat cggcccgcag ccgggaagac gcgccgtccg
     1261 gccttctgat ccgaacacat ggggttgatt gccatgaccg ccttcacggc cgcgcagatc
     1321 gagtggacac ttgattggct caaggagacc gtctgcgcca tgaacattac gcaggatcct
     1381 gcaccggagc agcctcaagc gatcacgggc aacgttctga aatgtggagc tgacaccaca
     1441 ctcattgcga cgactggcga gcaggctgcc accgacaagc cgtacgcact ctgaataaga
     1501 ttgtccctga ggggatcagg aagctggcca ccagcgagga gaccacgcca tatggtttgg
     1561 gaaagacgaa agcgcgacac caacatcatg ttcgcggtca cctacgacaa tgggcagagc
     1621 gcctatgtca cgatcagccc caagaaattg cagcatggcg accaccttgt gcgtcagctg
     1681 cttcgcgagc accaggagca aggctccatc ccgaacgggc agatcgcgtc ggtgaagcgc
     1741 gtacgatagc ggagggacat cgcggcgatc gaggtaacgg gcacgcgcga cctcgtcgag
     1801 cgccacggca gcgtcgctcc caaggacctt gccctcgcgc aatacagcgt tccgacgccg
     1861 cagcagctag cgcgggatcg attcagattg gatcgatccc gctctcgtcc ttatcgaacg
     1921 cgcgcactga cgttagcgca gcaccaccac cgtcgtgccg atggcgacgc gcttgtagag
     1981 gtcgatgacg tcggtgttgg tcatgcggat gcagccggag gagacggcgt gaccgatcgt
     2041 ccatggttcg ttggagccgt ggatgcggta ttccgagctg ccgagataca tggcgcgcgc
     2101 gccgagcggg ttgccgatgc cgccggacat gtagcgcggc aggtcggggc ggcggcgcag
     2161 catcgccttg ggcggccgcc agtccggcca ttcgcgcttg cgcgtgacgg tctcggtgcc
     2221 tgaccattgg aaaccctggc ggccgacgcc gatgccgtag cgcacggcct tgccgtcggg
     2281 gagcacgtaa tagaggcgcc gctccttggt ggagacgatc acggtgcc
//
LOCUS       DATAIQ010001145         1661 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_275823, whole genome shotgun sequence.
ACCESSION   DATAIQ010001145 DATAIQ010000000
VERSION     DATAIQ010001145.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1661)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1661)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1661
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_275823"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(255..554)
                     /locus_tag="VHN20_18880"
     CDS             complement(255..554)
                     /locus_tag="VHN20_18880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727893.1"
                     /translation="MLRKIKRSPEHREALRRVKEWTRARFSLPADAAILVSELACAIP
                     GCPPIETVVAFWTASDRRHHFKMFKPVADVTEDDLPPSWMKEALLYDAMLGCECC"
     gene            810..>1661
                     /locus_tag="VHN20_18885"
     CDS             810..>1661
                     /locus_tag="VHN20_18885"
                     /inference="COORDINATES: protein motif:HMM:NF019845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HEX2727894.1"
                     /translation="MAEKVLAAVRTAPSTTEIREYPMPDIPEDAALLKMEVAGICGTD
                     VKLYKTPPTKDPVIMGHENIGYIAKAGREFTRRKGFKEGDLVFVEPYVMCGKCEWCHK
                     GQYRHCENTDWRSNPEGIRYGYTSAARAPHLWGGFAQYVYLPWNAVVHHVPKGVSPEL
                     AGLVTPMANGIEWSLFDGHVGYNSTVLIQGPGQQGLSQTVICKQAGASLIIVTGTSKD
                     EARMEVAKKLGADYTIDVNKEDPLQRIMEITGGNGVDVVLDCTAGAGTIPVLLGIEAM
                     KRKGGRIV"
BASE COUNT          315 a          550 c          529 g          267 t
ORIGIN      
        1 atgatctcgt cgagcgggcg cgtttgttgc tgaaggctgc gaatcgtgtc ggctatgctg
       61 gcggcctcgt tataggcagg cacgatcgcc gtgatgcccg gtgcgagcgc gccggcgcct
      121 gttgtggtcg acactggaaa gccccctgca gatcgcgaag acggcccagc ggccggcgct
      181 gcggaaagta atgaagtgtc ggctcgaaat atgaccgcag catgacgcgc tgcaaaaacc
      241 gccggcgcta attttcagca gcattcgcag ccgagcatcg cgtcgtagag cagcgcctcc
      301 ttcatccagc tcgggggaag gtcgtcctcg gtgacgtccg ccaccggctt gaacatcttg
      361 aagtggtggc gccggtcgct cgcagtccag aacgcgacca ccgtttcaat gggcgggcag
      421 cccgggatcg cgcaggcgag ctccgacacg agaatcgcgg cgtcggccgg caggctgaag
      481 cgcgcgcgcg tccattcctt gacccggcgc agcgcctccc gatgctcggg gcttcttttg
      541 atctttctga gcaaaccggt ccttttcttc aatccagcgt tgacctactt ccggacaggt
      601 ttccggaccg tgcaagcatg agcctcgcag atagccgggc gcccgcgccg cttcctcggc
      661 tcaggatccc cggccgcggt aaggatttac ctaccttatc ccgccgccac gccaaacgcg
      721 gcatcgcgcc aaagagaacg cgcttgaccg gccgcggacc ggttctaaaa gtgcgcccaa
      781 accaaaaacc ccgaactgga ggcccttccg tggcagaaaa agtcctcgca gccgtccgca
      841 ccgccccgag caccaccgag atccgggaat acccgatgcc ggacattccg gaggatgcgg
      901 ccctgctcaa gatggaggtg gccgggatct gcgggaccga cgtcaagctc tacaagacgc
      961 cgccgaccaa agacccggtg atcatgggcc acgagaatat cggctacatc gccaaggcgg
     1021 ggcgcgagtt cacccggcgc aaggggttca aggaaggtga cctcgtcttc gtcgagccct
     1081 acgtgatgtg cggcaagtgc gagtggtgcc acaaaggcca ataccgccac tgcgagaaca
     1141 ccgactggcg ctccaatccc gagggtatcc gctacggcta tacgtcggcg gcgcgggcgc
     1201 cgcatctgtg gggcggtttc gcccagtatg tctacctgcc gtggaacgcg gtcgtgcacc
     1261 acgtgccgaa gggcgtctcg ccggaactcg ccggcctcgt cacgccgatg gccaacggca
     1321 tcgagtggtc gctgttcgac ggccacgtcg gctacaattc cacggtgctg atccagggcc
     1381 cgggccagca ggggctgtcg cagaccgtga tctgcaagca ggccggcgcc tcgctgatca
     1441 tcgtcaccgg cacgtccaag gacgaggccc gcatggaggt cgccaagaag ctcggcgccg
     1501 attacaccat cgacgtcaac aaggaagacc cgctgcagcg catcatggag atcaccggcg
     1561 gcaacggcgt cgacgtggtg ctcgactgca ccgccggcgc cggcacaatc ccggtgctgc
     1621 tcggcatcga ggccatgaag cgcaagggcg gccgcatcgt c
//
LOCUS       DATAIQ010001146         2654 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_172384, whole genome shotgun sequence.
ACCESSION   DATAIQ010001146 DATAIQ010000000
VERSION     DATAIQ010001146.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2654)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2654)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2654
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_172384"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..370)
                     /locus_tag="VHN20_18890"
     CDS             complement(<1..370)
                     /locus_tag="VHN20_18890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase"
                     /protein_id="HEX2727895.1"
                     /translation="MLELKAEPAALDDTRLEPVPFTALAGWSEDDHGAAFSVFRRSCK
                     TIVDDEPALRPASAAKPDLRAVCRAALAEAVPDGPAARRFFEARFEPFHIVPGTGRGF
                     LTGYFEPEYDGSLVPTSEFTT"
     gene            complement(418..1140)
                     /locus_tag="VHN20_18895"
     CDS             complement(418..1140)
                     /locus_tag="VHN20_18895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015927705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tim44/TimA family putative adaptor protein"
                     /protein_id="HEX2727896.1"
                     /translation="MQDSFDVQTIIFLAIAVFVIWKLRSVLGQKTGHERPPFDPFSRR
                     EPPARPGPVTETDNVVRLPGAGADRAQASPLDLAEDRWKGIAEPDTPVARGLDAVVKQ
                     EPGFDVRAFLEGAKLAYETIVTAFAQGDRKVLKGLLSKEVYEGFERAISEREKRGEKA
                     ETTFVSIDRAEIEGVEVKSRIAQVTVRFLSKLITATRDAQGHVVDGSPDTVVDVTDVW
                     TFARPLGTRDPNWQLVATEAAQ"
     gene            1385..1891
                     /gene="secB"
                     /locus_tag="VHN20_18900"
     CDS             1385..1891
                     /gene="secB"
                     /locus_tag="VHN20_18900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012331306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA];
                     GO_process: GO:0051262 - protein tetramerization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-export chaperone SecB"
                     /protein_id="HEX2727897.1"
                     /translation="MADTPAGNGAQADTAPSLNALAQYAKDFSFENPNAPRSLTPQQQ
                     PPQIGIQVNVNAKPLGDTDFEVDLTLEGDAKVGNEVLFAFELTYSGVFRVRNVPQDQI
                     HPVIMIECPRLLFPFARQIVADAVRNGGFPPLYIDPIDFVGLYRQRAAEGQAGTGAQP
                     AEQGSQTA"
     gene            complement(2103..>2654)
                     /locus_tag="VHN20_18905"
     CDS             complement(2103..>2654)
                     /locus_tag="VHN20_18905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004527 - exonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exonuclease domain-containing protein"
                     /protein_id="HEX2727898.1"
                     /translation="QGAYNVHGLSEEFLRDKPVFSAVVEELLSFVGDARLVIHNASFD
                     MGFLNAEFGRNGHPAVPFERAIDTLSLARRKHPNAANSLDALCARYGIDNSRRTKHGA
                     LLDAEILAEVYIELMGGKQADLGLALARQPVPVTGSSIIVPSAAPRAPVSRLTNADRE
                     AHLAFVATLGANAIWREYLSSEA"
BASE COUNT          445 a          886 c          879 g          444 t
ORIGIN      
        1 gggtcgtgaa ctccgacgtc gggaccagag agccgtcgta ttccggctcg aagtagccgg
       61 tcaggaaccc gcgcccggta cccgggacga tgtgaaacgg ctcgaaacgg gcttcgaaaa
      121 agcgtcgtgc cgcgggcccg tccgggaccg cctcggcgag cgcggcgcga cacacggcgc
      181 gcagatccgg cttggcggcg ctcgcaggcc gaagggccgg ctcgtcatcg acgatcgttt
      241 tgcaggagcg gcggaacacg ctgaaggcgg cgccgtggtc gtcctcgctc cagcctgcca
      301 atgcggtgaa gggcaccggc tcgagccggg tatcgtccag ggcggcgggc tcggccttca
      361 gttcgagcat cggcgcgagg ctcacggcga ggaggagcgc cggtacggcc gcacgcctca
      421 ctgggccgct tcggtggcga ccagctgcca gttcgggtca cgcgtcccga gcggacgtgc
      481 aaaggtccac acatcggtca cgtccaccac cgtgtcgggg ctgccgtcga ccacatggcc
      541 ttgggcatca cgggttgccg tgatgagctt cgacagaaag cggaccgtca cctgagcgat
      601 gcggctcttg acctcgacgc cttcgatctc ggccctgtcg atcgacacga atgtcgtttc
      661 ggctttctcg ccgcgctttt cgcgttccga gatggcgcgt tcgaagccct cgtaaacctc
      721 cttggagagg aggcctttca gcactttccg gtccccttgc gcgaacgccg tgacgatcgt
      781 ctcgtaagca agcttggcgc cttccaggaa tgcgcgcacg tcaaacccgg gctcctgctt
      841 gacgacggcg tcgagcccgc gcgcgactgg cgtatccggc tcggcaatcc ccttccagcg
      901 gtcctcggcc aggtcaaggg ggctcgcctg cgcacggtcg gcgcccgctc caggaagcct
      961 gacgacgttg tcggtctcgg tgacggggcc aggacgggcc ggtggctcgc gccgcgagaa
     1021 gggatcgaat ggaggtctct cgtgcccggt cttctggcct agcaccgacc gcaacttcca
     1081 gatcacgaac accgcgatcg cgagaaaaat aatggtctgg acgtcgaaag aatcctgcat
     1141 cgtcgatccg gtcttgcgcc tggggcctca gcccctcgcc gtccatgtcc gagggagacg
     1201 gcggcgacca cgtcgctcgc acgcatatgg ggtttcgggg tcgtaacatc cacctagggc
     1261 gccgacaagc gagcgttgcc cggcgccacg aagcgtgata gcgcgatcgc gcattgcccg
     1321 ccaatgcgcg atcggtcgcc cgctcggcgg cgctctgcac atgtctcgag ttcaggagcc
     1381 ttcgatggct gacaccccgg caggaaacgg cgcacaggcc gatactgcgc cttcgctcaa
     1441 cgcgctcgcc caatacgcca aggatttctc gttcgagaac cccaatgcgc cgcgctcgct
     1501 gactccccag cagcagccgc cgcagatcgg cattcaagtg aatgtgaatg cgaagccgct
     1561 tggcgacacg gatttcgagg tcgacctgac cctcgagggg gacgccaaag tcggcaacga
     1621 ggtgctgttc gccttcgagc tcacctattc gggcgtgttc cgcgtgcgca atgtgccgca
     1681 ggaccagatc catccggtca tcatgatcga atgcccgcgg ctgctgtttc cattcgcgcg
     1741 ccagatcgtg gccgacgccg tgcgcaacgg gggctttccg ccgctctaca tcgatccgat
     1801 cgacttcgtc ggtctttacc ggcagcgggc cgccgagggt caggcaggga cgggcgcgca
     1861 gccggccgag cagggttcgc agaccgcctg aggccatatc gcttcaggcg ccgacggccc
     1921 tcctcctcca actcccgcat accttttttg ccgggcaacg cctgtccgaa gcggatcgga
     1981 caggcgccgt gggatcgcgc ttgcgcgtga cccggcgagg cgggtagcgc cttcgccgca
     2041 acgatcgcgc gatgcaagta gacggcgagc aggaccgctt cggtccgagg cgcgaccccg
     2101 ggtcacgcct cgctggacag gtattcccgc cagatggcgt tggcgcccag ggtggcgaca
     2161 aaggccagat gggcttcccg gtcggcgttc gtcaggcgcg aaaccggcgc gcgcggcgcc
     2221 gccgaaggaa caatgatgct gctgcccgtg acgggaacgg gctggcgcgc caaggcgagg
     2281 ccgagatccg cctgcttgcc gcccatcagc tcgatataga cctcggccag gatctcggca
     2341 tcgagcaggg cgccgtgctt cgtgcgcctc gaattgtcga tcccatagcg ggcgcaaagc
     2401 gcatcgaggc tgttggcggc gttcggatgc ttgcgccgcg ccagcgaaag cgtgtcgatc
     2461 gcccgctcga acggcacggc cgggtgtccg tttcgtccaa actcggcgtt gagaaacccc
     2521 atgtcgaagc tggcgttgtg gatgacgagc cgggcgtcgc cgacgaagct gagcaattcc
     2581 tcaaccaccg cggaaaagac cggcttgtcc cttaagaatt cctccgacag accatggacg
     2641 ttgtaggcgc cctg
//
LOCUS       DATAIQ010001147         1626 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_80553, whole genome shotgun sequence.
ACCESSION   DATAIQ010001147 DATAIQ010000000
VERSION     DATAIQ010001147.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1626)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1626)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1626
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_80553"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(75..1604)
                     /locus_tag="VHN20_18910"
                     /pseudo
     CDS             complement(75..1604)
                     /locus_tag="VHN20_18910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011925539.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
BASE COUNT          249 a          551 c          583 g          243 t
ORIGIN      
        1 gacaacgagc atgatccggc gaaagcctgc ccccagtccg ggggcaggct ttcgccggat
       61 catgctcgtt gttgataagg ctcgccgtcg cgcagcgcca tggtcggcgt gagcgtcgag
      121 cgcggccgct tcccgggcat cagcgccgcc gggtggcctt cgtcgagcca gaacatctgc
      181 gcgcgcgtgc cgagacagaa gccgagctcg gggatgacgg gcgaggattg cagccagccg
      241 cccgacggcg tcgccgagac catgttgccg tcgcggtcga tgatgtcgaa atggacggtg
      301 tcgccgcgca cgccgcccat gcgcccgacc gtcggctcgc cggcgccgac gaggcccgga
      361 tcgttgtcgg cgtcgtcgtc atgggtccac ggcacgcgcc cgaccgtcgg ttcgccgacg
      421 cccgtgcggc cgaccgcggt gcgcgggcct tccgcgattc gcacgtcgat ctgcttgccg
      481 aagcccgcca ccgagccggg ccgcagctcg agcgaggcac ggtcggtgac gagcgtgcgg
      541 cgggcctcgt tgtaggtatc ggagagcagc gtcgcgatgg gcacgtcgac gaaatcggga
      601 tcgccgtaga acgtgtcccg gtcggcgaag gcgagcttgg cgcattcgac ctggagatgg
      661 atgaagtccg gcccggtggg atcgagcccg tcgaggccga gccccttgag cagggcaagc
      721 tgctggaggg cggcgagccc ctgcgtccac ggccccgcct tgagcaccgt gtagcggccg
      781 taatcataag cgatcggcgc ctcgaccctc gcctgccatc gcgccatgtc ggcgccggtg
      841 agcacgccgc gatgcggctc gccggagacg tccatcacgt cctgcgtgcg gcagaagcgg
      901 tcgatcgcct ccgccacgaa cccttccgac cagaccttgc gggcgcgttc gatctgcgcc
      961 tcgcggttgc ctttggcgcc gccggcttcg cgcaggacgc gctcgtacat gtcggcgagg
     1021 gcggggttgg tgaacatcgt gcccggccgc ggcacctgcc cgcccggcag atagacggcg
     1081 gccgatgtct gccaatcgtc gaggaacagg tccttgacag tctcgatcgt cgcgcagatg
     1141 cgctcgacga gcgggtagcc gtggcgcgcg tagccgatgg caggcgtgag cacgtcggcg
     1201 agcggcattg tgccgtaatc gcgcaacagc agcatatagg cgtcgaacgt gcccggaatg
     1261 caggcggcca gaagacccgt cccgggcacg aggtcgaggc caagcgagcg ataatgggca
     1321 atcgtggcgc cggcgggagc cggcccctgc ccgcagatga cctcgggctt gccccgcttc
     1381 acgtcataaa cgatcagcgg cacgtcgccg cccgggccgt tgagatgcgg ctcgaccacc
     1441 tgcagcgtga acgccgtcgc gaccgccgca tcgaaggcgt tgccgccacg ctccaggatg
     1501 cccatcccga ccgccgtcgc gatccagtgg gtcgatgcga cgactccgaa ggtgccctcg
     1561 atctcaggac gggtcgtgaa cgggttgggc gtgatcaggc tcatgtcgac tcggctgctg
     1621 cgaggg
//
LOCUS       DATAIQ010001148         3447 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_80788, whole genome shotgun sequence.
ACCESSION   DATAIQ010001148 DATAIQ010000000
VERSION     DATAIQ010001148.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3447)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3447)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3447
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_80788"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(170..1120)
                     /locus_tag="VHN20_18915"
     CDS             complement(170..1120)
                     /locus_tag="VHN20_18915"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF016115.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016812 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in cyclic amides
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HEX2727899.1"
                     /translation="MKLIATLGASMLVASAALAQTPSWSPPPEAQRCPSKWGAQDERG
                     SANHQKAAAVMNAAKLIKTGEVIEIGHVLSEKMPFFGTRRFDVHIKRTFMNQPSNRRG
                     SNEEIVISEIGQVGTQFDGFAHQTHENSWYNCYKVDENSSRTGFTKLGIHNVGALFTR
                     GVLIDVAAYKGVETLPDTYEITVEDLKGALGKQNISLQPGDAVLINTGWHKLWAKDNA
                     RYVKSCPGIGVKAAEWLIAQDPLLLGSDNWPVEVSPNPDPELSLPVHQIALVVNGVHL
                     LENLKLDELTQKQAYEFAFVMQPLKIQGGTGSTVAPIAVR"
     gene            1353..2054
                     /gene="purQ"
                     /locus_tag="VHN20_18920"
     CDS             1353..2054
                     /gene="purQ"
                     /locus_tag="VHN20_18920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004642 -
                     phosphoribosylformylglycinamidine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurQ"
                     /protein_id="HEX2727900.1"
                     /translation="MKAAVIVFPGSNRDHDVARALQQAGASVSKVWHAEPEFPGGTDL
                     AVLPGGFSYGDYLRCGAIAARAPVMDAVRRHAGRGGLVLGICNGFQILCESGLLPGVL
                     VRNANLRFICHRQALRVERIDTAFTRRYAQGQVINVCVAHGEGNYFADEDTVRRLEGE
                     GLVAFRYSDAAGHVTADANRNGSLNAIAGIYSDELNVLGLMPHPENLIDDLVGGTDGR
                     GMFESLVATAARVAA"
     gene            complement(2105..3304)
                     /locus_tag="VHN20_18925"
     CDS             complement(2105..3304)
                     /locus_tag="VHN20_18925"
                     /inference="COORDINATES: protein motif:HMM:NF012321.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vWA domain-containing protein"
                     /protein_id="HEX2727901.1"
                     /translation="MWKRFVADAVGGVGFMFALAVVPVLGLVGAAVDYSRASQAHTHL
                     QKAVDAAALAAGKVALEQNRRDVDKNALDVFNGTFPRSEGVTVTKFTVTAAGDILTVA
                     VDAQLPTMFGRIIGKTVTDLSATASVPTSTMALEVVLVLDNTGSMAALGKMTALKDAA
                     KNLIDTLQGASTGAYASIGLVAFNAQVNVGAAYRDATWLSFTAASTPLPLKTDKAAWT
                     GCVADRDDPYDIRDPITTTAETLYPGVVCKYPGLIPIKPLSRDFAGLKTAIDAMNPTG
                     NTNTAIGLAWGMALLTPSAPLSTAQPPSSKLQKTIVFLTDGINTENKLSTDPLVIDGR
                     TDRVCEEIRKLNINLYTIRVIEGNETLLRNCATTPGMYHSVTSASELKDVFKKIAGEI
                     ATLRLSY"
BASE COUNT          553 a         1079 c         1173 g          642 t
ORIGIN      
        1 cccgctctcg tccgtattga gcgcatgatc gtccgcggcg aagcggtatc gacccccgga
       61 tcaagtccgg gggcaggctt tcgccggatc atgctctgtc catccgtgag caaggccgcg
      121 acttgcgttc gaggcggaga ccgcgacgca aggcggctgt tgctgatgtt cagcgcacgg
      181 cgatcggcgc gaccgtggag ccggtgccgc cctggatctt gagtggctgc atcacgaagg
      241 cgaactcgta ggcctgcttc tgcgtgagct cgtcgagctt caggttttcg agaaggtgca
      301 cgccgttgac cacgagggcg atctggtgca ccggcaatga cagctccggg tccgggttcg
      361 ggctgacctc gacgggccag ttgtcggacc cgagcagaag cggatcctgg gcgatcagcc
      421 attccgccgc cttcacgccg atgccggggc aggatttcac ataacgggcg ttgtccttgg
      481 cccagagctt gtgccagccg gtgttgatga gcaccgcgtc gccgggctgc agcgagatgt
      541 tctgcttgcc gagggcgcct ttgaggtcct ccacggtgat ctcgtaggtg tcgggcagcg
      601 tctccacgcc cttgtaggcc gcgacgtcga tcagcacacc gcgcgtgaag agcgcgccca
      661 cattgtggat gccgagcttg gtgaagccgg tgcggctgga attctcgtcg accttgtagc
      721 agttgtacca gctgttctcg tgcgtctggt gggcgaagcc gtcgaactgg gtgccgacct
      781 gaccgatctc ggagatcacg atctcctcgt tcgagccgcg gcggttcgat ggctggttca
      841 tgaaggtgcg cttgatgtgc acgtcgaagc ggcgcgttcc gaagaacggc atcttctcgg
      901 acagcacgtg cccgatctcg atgacctctc cggtcttgat gagcttggcc gcgttcatca
      961 ccgcggcggc tttctggtgg ttggccgagc cgcgctcgtc ctgcgcgccc cattttgacg
     1021 ggcagcgctg cgcctccggt ggcggcgacc acgatggcgt ctgagcgagc gcggcgcttg
     1081 caacgagcat ggatgcgccg agcgtggcga tgagcttcat gcgtccctcc caagctgaat
     1141 tggcctgaat tttttcgagg ccatgcaaag catgatcctc gaaactcggg agagcaagga
     1201 tgtgagggcc tggacattca gcccgtgcaa ggatccgacg acctgatctt cgaacccagc
     1261 cgggtaagca ggttggccgt catcagattt gcggcgggag ggctgacccg ctaagacagc
     1321 gccgccgcga gacctacccc aacggacccc acatgaaagc cgccgtgatc gtcttcccag
     1381 gctccaaccg cgaccacgat gtggcgcgcg ccttgcagca ggcgggcgcc agcgtcagca
     1441 aggtgtggca tgccgagccg gagtttccgg gcggcaccga tctcgccgtt ctgccgggcg
     1501 gcttcagcta cggcgactat ctgcgctgcg gcgccatcgc ggcgcgcgcg cccgtgatgg
     1561 atgcggtgcg tcgccatgcc ggccgcggcg gtctcgttct cggaatctgc aacggcttcc
     1621 agatcctgtg tgaatccgga ctgctgccgg gggtgctggt gcgcaacgcc aacctgcgct
     1681 tcatctgcca caggcaggcg ctgcgcgtcg agcgcatcga cacggccttc acgcgccgct
     1741 acgcgcaagg gcaggtgatc aacgtatgcg tggcgcacgg cgagggtaac tacttcgccg
     1801 acgaggacac ggtgcggcgg cttgaaggcg agggcctcgt cgcgttccgc tacagcgacg
     1861 ccgccggcca cgtcaccgcc gacgccaatc gcaacggctc tctcaacgcg atcgcgggaa
     1921 tctactcgga cgagctcaac gtgctgggcc tgatgccgca cccggagaac ctgatcgacg
     1981 atctcgtcgg cggcacggac ggccgcggca tgttcgagag cctggtcgcg accgctgccc
     2041 gcgttgcagc ctgatcgccc ggaagcccgt ccaggacgtg atccggaagc cccgggaagg
     2101 ccgttcagta ggacagcctg agcgtcgcga tctcgccggc gatcttcttg aacacgtcct
     2161 tgagctcgga tgccgaggtc accgagtgat acatgcccgg ggtcgtcgcg cagttgcgca
     2221 ggagcgtctc gttcccttcg atcacccgga tcgtgtagag gttgatgttg agcttcctga
     2281 tttcctcgca gacgcgatcg gtgcggccgt cgatcaccag cgggtcggtg ctcaacttgt
     2341 tctccgtgtt gatgccgtcg gtgaggaaca cgatcgtctt ctgcagcttg ctgctcggcg
     2401 gctgcgcggt gctcagggga gcgctggggg tgagcagggc catcccccag gccaggccga
     2461 tggccgtatt ggtattgccg gtcgggttca tcgcatcgat ggccgtcttg agcccggcga
     2521 agtcgcgcga cagcggcttg attggaatca ggcccggata cttgcagacg acgcccggat
     2581 agagcgtctc cgccgtcgtc gtgatcggat cacgaatgtc gtaagggtcg tcgcggtcgg
     2641 cgacgcagcc ggtccaggcg gctttgtcgg tcttcagagg cagaggggtg ctggcagccg
     2701 taaagctgag ccacgttgcg tcgcgatacg cagccccgac gttgacctgg gcattgaagg
     2761 ccacgaggcc gatcgatgca tacgcgcccg tggaggcgcc ctggagcgtg tcgatcaggt
     2821 tcttggctgc gtccttgagg gcagtcatct tgccgagcgc cgccatcgac ccggtgttgt
     2881 cgagcacgag caccacctcg agggccatcg tgctggtcgg cactgaggcc gtggcgctga
     2941 ggtccgtgac cgttttgccg atgatccggc cgaacatcgt cggcaactgg gcatcgacgg
     3001 ctacggtcag gatgtcgccc gcggccgtga cggtgaattt cgtgacggtg acgccctcgc
     3061 tgcgggggaa cgtgccgttg aagacgtcaa gcgcgttctt gtcgacgtcc ctgcggttct
     3121 gctcgagagc gaccttgccc gccgccagcg cggcggcatc gacagccttt tggagatgcg
     3181 tgtgggcctg ggaagcgcgc gaatagtcga ccgccgcccc gaccaggccg agcaccggaa
     3241 ccacggcgag ggcgaacatg aagcccaccc cgccgacggc atcggcgacg aaccgtttcc
     3301 acatcaaggc gcaggtgcgt tccatgaggc gtagggtgcc gcatgggtgt tgcggaaagt
     3361 taaatccaat tcacgaaagg cctttgtcgc cgcgttaatg cggcccgccg cggcgcccag
     3421 atgtgcggtc ccctcagtgg gagagcc
//
LOCUS       DATAIQ010001149         3169 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_173029, whole genome shotgun sequence.
ACCESSION   DATAIQ010001149 DATAIQ010000000
VERSION     DATAIQ010001149.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3169)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3169)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3169
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_173029"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            84..380
                     /locus_tag="VHN20_18930"
     CDS             84..380
                     /locus_tag="VHN20_18930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727902.1"
                     /translation="MKIFGSLQLALALGLSAIGPSAALAQSNPTYIPFQGSSKGAFYK
                     PDAGPASHVGIVVMHRTSNYLRHPTTRIPTTTSSSYRAAATPAPAAGTRNRRST"
     gene            complement(474..668)
                     /locus_tag="VHN20_18935"
     CDS             complement(474..668)
                     /locus_tag="VHN20_18935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727903.1"
                     /translation="MNRIGTEIDCSAHTVELLLEHQSIPSLEFVARMAWALRNDQMVK
                     NFVPDRNLPDASATPGGWRP"
     gene            667..825
                     /locus_tag="VHN20_18940"
     CDS             667..825
                     /locus_tag="VHN20_18940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727904.1"
                     /translation="MAMGGHYYVGDGERYLDVAASADKDFVVVEGATHSFTPCTRCEK
                     ASGHIRTP"
     gene            complement(888..2117)
                     /locus_tag="VHN20_18945"
     CDS             complement(888..2117)
                     /locus_tag="VHN20_18945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015316471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF763 domain-containing protein"
                     /protein_id="HEX2727905.1"
                     /translation="MGERMTRLGAVMTEAIVHHYGRDELLRRLAHPFWFQSFGAVMGM
                     DWHSSGITTSVIGALKRGLTPLSGELGIHVCGGRGKHSRQTPAELVAIGERVGLDGAA
                     LADASRMVAKVDSAAVQDGFDLYLHGFIVTDDGKWVVVQQGMNGDRRQARRYHWLSEG
                     LKSFVDEPHTAIDGPRQGDIVNLTDRRADASRRAQLEMLDSLGPDRIAREFAAATARE
                     QKPAASGQLVLPHLVMPDHHEVRASDMIVRRLHANLAAAADRGPSDYADLLLTPGVGA
                     RTVEALALVAEVVHGAPCRFSDPARFSFAHGGKDRHPFPVPLRVYDRTIQVLKSAVQN
                     ARLGRDEELAALKRLDDQARILDRHASGAPVEELFAEERTNSHAYGGRSIFGDEPPLA
                     KLGADSLNLSEATARKR"
     gene            2025..2252
                     /locus_tag="VHN20_18950"
     CDS             2025..2252
                     /locus_tag="VHN20_18950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727906.1"
                     /translation="MSEAAQQLVAAIVVHDGLGHHRAKARHAFAQPPRYAAAVQRQIG
                     ASSPSCHVILVGPWLAEIGFSSAASSMIGRL"
     gene            2478..2657
                     /locus_tag="VHN20_18955"
     CDS             2478..2657
                     /locus_tag="VHN20_18955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727907.1"
                     /translation="MSEIAAGLGSVICRSAIDVGFSGAHCYNWDTQLRLGYTALAMVI
                     AVIVAAGVRRFGHSA"
     gene            complement(2799..>3169)
                     /locus_tag="VHN20_18960"
     CDS             complement(2799..>3169)
                     /locus_tag="VHN20_18960"
                     /inference="COORDINATES: protein motif:HMM:NF018942.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HEX2727908.1"
                     /translation="SLFLPSGLGKAMEFGRFAASLVGKGLPYPELWAFAVVAAELGGA
                     LALILGVWPRWAAAALIAFMAFTTWTTLRFSWPLPGWPLPGVARGQEAFYKNVAIIGG
                     LLFYYVSGPGSWSWRRGGMA"
BASE COUNT          550 a         1076 c         1016 g          527 t
ORIGIN      
        1 cgagccattg atccccactc ggcttgcccc gtcccgctgc ccgcgatcct tttgcggacg
       61 ccacggcatt tgggcatcac gctatgaaga tcttcggcag cttacagctt gcgctcgcac
      121 tcggcctgtc cgccatcggc ccgtccgcgg ctctcgccca gagcaatccg acctacattc
      181 cgtttcaggg cagcagcaaa ggcgcgttct acaagcccga tgcggggccg gcgtcgcatg
      241 tcggcatcgt cgtcatgcac cgcacctcga actatctgcg gcacccgact acccgtatcc
      301 cgacgacgac ctcatcgtca taccgcgcag cggcaacccc ggcgccggcg gcggggactc
      361 ggaatcgtcg ctctacgtga cgcagccgga cattgcgttc ttcaacagca cggcgcgtcc
      421 gcagaagctg ctgcgcaacg acggcaccat cgagacgcag gtgatcaaca gcgtcatggt
      481 cgccaacccc ccggggtcgc cgaagcgtcc ggcaagttcc ggtccggcac gaagttcttc
      541 accatctggt cgttcctcag cgcccaggcc atccgggcga cgaactccaa ggacgggatc
      601 gactggtgct cgagcaacaa ctcgacggta tgcgcgctgc agtcgatctc cgtcccgatc
      661 ctgttcatgg caatgggcgg gcattattac gtcggcgacg gagaacgcta tctcgacgtc
      721 gcggccagcg ccgataagga cttcgtcgtg gtcgagggcg caacacattc gttcacgccg
      781 tgcacacgct gcgagaaggc gtcggggcat attcgaacac cgtgaagaac ctgttcgact
      841 acgcggccgc atggatcaat gcacgctatt gatcccgcgg gcggatctca ccgtttgcgc
      901 gccgtcgctt cgctcaggtt caggctgtcg gcacccagct tcgccagcgg cggctcgtcg
      961 ccaaagatgc tgcggccgcc ataggcgtgc gaattcgtgc gctcttcagc gaacaactcc
     1021 tcgaccggcg cgccggaggc atgccggtcg aggatcctgg cttgatcgtc gaggcgtttg
     1081 agcgccgcga gttcctcatc gcgtccgagc ctggcgtttt gaacggccga cttcagcacc
     1141 tgaatggtcc ggtcgtagac gcgcaatggc accggaaacg ggtggcggtc cttgccgccg
     1201 tgggcaaagg agaaccgggc ggggtcgctg aagcggcacg gcgcgccatg caccacctcc
     1261 gccaccaggg cgagcgcctc gacggtgcgc gccccaacgc cgggcgtgag aagcaggtcc
     1321 gcgtagtccg acgggccgcg gtcggccgcc gcagcaagat ttgcgtgcag ccggcgcacg
     1381 atcatgtcgc tggcgcggac ctcatgatgg tcaggcatga caagatgggg aagcaccagc
     1441 tgtcccgacg ccgcaggctt ttgctcacgc gcggtcgcgg ccgcgaactc ccgggcaatc
     1501 ctgtcgggcc cgagcgagtc cagcatctcg agctgcgcgc ggcgcgaggc atcggcgcgc
     1561 cggtcggtca gattgacgat gtcgccctga cggggcccgt ctatggccgt atgcggttcg
     1621 tcgacgaaac tcttcagtcc ttcggacagc caatggtatc gccgcgcctg acggcgatca
     1681 ccattcatgc cctgctggac cacgacccat ttgccgtcgt cggtaacgat gaagccgtgc
     1741 agataaaggt cgaagccgtc ctgcacggcg gcgctgtcga ccttggccac catacggctg
     1801 gcgtcggcca gtgccgcgcc gtcgagcccg acgcgctcgc cgatggcgac gagctcggcg
     1861 ggcgtctgcc gcgagtgctt gccgcgcccc ccgcacacgt ggatcccgag ctcgcccgac
     1921 aacggcgtga gcccgcgctt caaggcgccg atcacgctcg tggtgatgcc ggacgagtgc
     1981 cagtccatgc ccatcacggc cccgaatgac tggaaccaga agggatgagc gaggcggcgc
     2041 agcagctcgt cgcggccata gtggtgcacg atggcctcgg tcatcaccgc gccaaggcgc
     2101 gtcatgcgtt cgcccagcca cctcggtacg cggccgccgt gcagcggcag atcggcgctt
     2161 ccagcccgtc gtgtcatgtg atccttgtcg gcccttggct cgcggagatc gggttctcca
     2221 gtgctgcgtc tagcatgatc ggcaggcttt gatgaccctc cgtgccgcat ccatggggca
     2281 tgtcggcggc tgtctctccg gcaagccgat ctgccacgac cgtgacaact cgtctttggg
     2341 tcaacggcct cgcggagtgc ggaaaaattt atcggatttg ggcgccaatt cgcggcgaaa
     2401 tggcggtcgc gtctacaccc cgcaagaacc cggccctggc atcatgggca cgtcgatgtc
     2461 cagtgaggcc aggagcgatg agcgagatcg cagcaggtct gggaagcgtc atatgccgca
     2521 gcgcgatcga tgtcgggttc tccggagccc attgctacaa ctgggatacg cagttgcggc
     2581 tcggctatac ggccctggcg atggtgattg cggtcatcgt ggccgcgggc gtgcggcgct
     2641 tcggccactc ggcctgaaca cttcaacatg gtcgagcgaa gcggacctcg cttcgccaaa
     2701 aagggcttgt cccgggcctg gatgcgggaa cgtgtgtctc aagctgcttc acagcgggat
     2761 cgtttcaatg ggaatcctgt cgacggcccg ggctgtcact aagccatgcc gccccgccgc
     2821 caactccagc ttcccgggcc gctgacgtaa tagaacagca accccccgat gatcgcgacg
     2881 ttcttgtaga acgcctcctg cccccgcgcc acgccgggca gcggccagcc ggggagcggc
     2941 cacgagaagc gcagcgtggt ccaggtcgtg aaggccatga aggcgatcaa tgcggcggcc
     3001 gcccaccgcg gccagacgcc gagtatcagc gcgagggcgc cgccgagctc ggcggcgacg
     3061 acggcaaagg cccacaattc cggatagggc agccccttgc cgaccagcga ggccgcaaaa
     3121 cgcccgaact ccatcgcctt gcccaatccg gacggcagga acaacgagg
//
LOCUS       DATAIQ010001150         3654 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_80969, whole genome shotgun sequence.
ACCESSION   DATAIQ010001150 DATAIQ010000000
VERSION     DATAIQ010001150.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3654)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3654)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3654
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_80969"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..286
                     /locus_tag="VHN20_18965"
     CDS             <1..286
                     /locus_tag="VHN20_18965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012116711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX2727909.1"
                     /translation="SIAYCAAKAGIDVMTKALARALAPKVRVLAVSPGVVDTGFVPGR
                     GPDFNDKVAATTPLKRIATADDIAAAIVACATLLGFSTGTTIVVDGGRAL"
     gene            297..1211
                     /locus_tag="VHN20_18970"
     CDS             297..1211
                     /locus_tag="VHN20_18970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012116712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-keto-5-aminohexanoate cleavage protein"
                     /protein_id="HEX2727910.1"
                     /translation="MRAPRDKVYITCAVTGNLTLPEQTPHLPITPEEIADACLGAAEA
                     GAAIVHIHVREPGTGKPSMEIDLYRDVVERIRARNTQLILNITTGPGGRFVPSPDEPR
                     VAGPGTTLLVPEKRVEHIAVLKPEICTLDLNTMNSGKEVVINTPGSVRRMAKVVREAG
                     VKPEIELFDSGDIALMHDLLKDGTLSGPVLSSFVLGVRYGFQPSPESVIYARNLLPQD
                     AEFTAIGIGRVVFTMVAQSYLAGGHVRVGIEDGVYLSRGVLATSNAVMVEKARRIVED
                     LGGQIANPREAREIIGLPTRLADTKRVA"
     gene            1243..2274
                     /locus_tag="VHN20_18975"
     CDS             1243..2274
                     /locus_tag="VHN20_18975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007607920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding alcohol dehydrogenase family
                     protein"
                     /protein_id="HEX2727911.1"
                     /translation="MSVAEKIGSEVVAGVEARCLRLGAKAADAASVAPAIERRRLARE
                     RADDVLVEIRAAAVNPSDVKAAIGMMPYAVFPRTPGRDYAGVVVEGPPHLFGKEVFGS
                     SGDLGIRRDGTHATHLVVEADAVVPKPANISLTEAAGIGVPFVTATEGYRRAGMPKPG
                     ETVLVMGLNGKVGQAATQIASWRGARVIGVVRKAEAYEGHASGPVEVIDSSRVDVAQR
                     VRELTNGKGADIVFNTVGDPYFQAAHKSLALAGRQILIAAIDKIVEFNIFEFYRGRHT
                     YVGIDTLALSSVASGDVLKELVPGFASGALKPFPIKPEAIYRLEDAAKAYVAVMSWSR
                     DRVVFEPGR"
     gene            2279..2620
                     /locus_tag="VHN20_18980"
     CDS             2279..2620
                     /locus_tag="VHN20_18980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012116714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX2727912.1"
                     /translation="MNVVRLDAAPAYEAPGHNLMRMLRLQGREAGASDVLWLGLSHIL
                     PGGGTTLDASPLEKMYVVLDGEVTISNGTEEVTLRTWDSCRIAPDEPRALANRTNRPA
                     TILLAMPLAPG"
     gene            2674..3645
                     /locus_tag="VHN20_18985"
     CDS             2674..3645
                     /locus_tag="VHN20_18985"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEX2727913.1"
                     /translation="MDRRHFLKTALATTSAIAGTRALAQAPGDAGSYPNHTVTLVVPF
                     SAGSMTDILARTLAEKLSERWKQNVVVENRPGIAGTAGVAKTAPDGYTLMLTSNGHTV
                     IKAVNPNVAFDPVKDFVAVTPVASTPSILIVPPDSPTKTLKELIDTAKAKPGALNYSS
                     AGLGSSTGIAAELLKQITKTNLVVVPHRGLPESQTAVIRGDVAMAFTFFNVGGDLIQG
                     GKLRAVAVTGNKRMSQLPDVPTFAEAGLPDFTYDSWFGVFVPAGTPKPIVDKVARDVA
                     AALQGADVKARFDPQGVEIVSSTPEKFGEVLRSDAERYGALFPKQGG"
BASE COUNT          604 a         1279 c         1225 g          546 t
ORIGIN      
        1 gagcatcgcc tattgcgcgg cgaaggccgg catcgacgtg atgaccaagg cgctggcgcg
       61 ggcgcttgcg cccaaggtgc gcgtgctggc ggtgtcgccg ggcgtcgtcg acacgggctt
      121 cgtgcccggc cgcggccccg atttcaacga caaggtcgcg gccacgacgc cgctcaagcg
      181 catcgccacg gccgacgaca tcgccgcggc gatcgtggcc tgcgcaaccc ttctcggctt
      241 ttcgaccggc accacgatcg tcgtcgacgg cggccgggct ttgtgaggag gatgtcatgc
      301 gcgctcccag ggacaaggtc tacatcacct gtgcggtcac cgggaacctg acgctgccgg
      361 agcagacgcc gcacctgccg atcacgcccg aggagatcgc cgacgcgtgc ctcggggcgg
      421 ccgaggcggg agccgccatc gtgcatatcc acgtgcgcga gcccggcacc ggcaagccgt
      481 ccatggagat cgatctctac cgcgacgtgg tcgagcgcat ccgcgccagg aacacccagc
      541 tgatcctcaa catcacgacc gggcccggcg ggcgtttcgt gccctcgccg gacgagccgc
      601 gcgtcgccgg cccgggcacg acgctgctcg tgccggaaaa gcgcgtcgag cacatcgccg
      661 tgctcaagcc cgagatctgc acgctcgacc tcaacaccat gaactcgggc aaggaggtcg
      721 tgatcaacac gcccggcagc gtccgccgca tggccaaggt ggtccgcgaa gccggggtca
      781 agccggagat cgagctgttc gattccggcg acatcgccct gatgcacgac ctcctcaagg
      841 acgggacgct gtccggcccg gtgctcagtt cgttcgtgct gggcgttcgc tacggcttcc
      901 agccgagccc ggaaagcgtg atctacgcgc gcaacctcct gccgcaggat gccgagttca
      961 cggcgatcgg catcggccgc gtcgtcttca ccatggtggc ccagtcctat ctcgccggcg
     1021 gccacgtccg cgtcggcatc gaggacggcg tctacctgtc caggggcgtg ctcgccacct
     1081 cgaacgccgt catggtcgaa aaggcccggc ggatcgtcga ggatctgggc gggcagatcg
     1141 ccaatccgcg cgaggcgcgc gagatcatcg ggctgccgac ccgcctcgcc gatacgaaac
     1201 gcgtggcatg atgaatgtgc ggaaagggca ggggacctcg acatgagcgt cgctgaaaag
     1261 atcggctccg aggttgtggc cggcgtcgag gccaggtgcc tgcgtcttgg cgccaaggct
     1321 gccgatgcgg ccagcgtcgc gccggcgatc gagcggcgcc ggctcgcgcg tgagcgcgcc
     1381 gacgacgtcc tcgtcgagat ccgggcggcg gccgtgaacc cgtccgacgt caaggcggcc
     1441 atcggcatga tgccttacgc cgtgttcccg cgcacgcccg gccgcgacta tgccggcgtt
     1501 gtcgtcgagg ggccgccgca ccttttcggc aaggaagtgt tcggctcctc cggcgatctc
     1561 ggcatccgcc gcgacggcac gcacgccacc catctggtcg tcgaggccga cgccgtcgtg
     1621 ccgaagccgg ccaacatctc gctgacggag gcggccggca tcggcgtccc gttcgtgacc
     1681 gcgaccgagg gctatcgccg cgccggcatg cccaagcccg gcgagacggt gctggtgatg
     1741 ggcctgaacg gcaaggtcgg ccaggcggcg acccagatcg ccagctggcg cggtgcgcgc
     1801 gtcatcggcg tcgtgcgcaa ggcggaggcg tacgagggcc acgccagcgg gccggtcgag
     1861 gtgatcgact cctcgcgcgt cgacgtggcc cagcgcgtgc gcgaactgac caacggcaag
     1921 ggcgcggaca tcgtcttcaa caccgtcggc gacccttatt tccaggcggc gcacaagtcg
     1981 ctcgccctgg ccggccgcca gatcctgatc gcggcaatcg acaagatcgt cgagttcaac
     2041 atcttcgagt tctaccgcgg ccggcacacc tatgtcggca tcgacacgct ggcgctgtca
     2101 tccgttgcca gcggcgatgt cctcaaggag ctggtgccgg gcttcgccag cggggccttg
     2161 aaacctttcc cgatcaagcc ggaggcgatc taccggctcg aggatgccgc caaggcctat
     2221 gtggcggtga tgagctggtc gcgcgatcgc gtcgtgttcg agccggggcg gtgacttcat
     2281 gaacgtggtc cgcctcgacg ccgctcccgc ctacgaggcg cccggccaca atctgatgcg
     2341 catgctgcgc ctgcagggcc gcgaggcggg tgcctccgac gtgctctggc tcggcctgtc
     2401 gcatatcctg cccggcggcg gcaccacgct cgacgcctcg cctctcgaga agatgtacgt
     2461 cgtcctcgac ggcgaggtga cgatctccaa cggcaccgag gaggtgacgc tgcggacgtg
     2521 ggattcgtgc cgcatcgccc ccgacgagcc gcgcgccctt gcgaaccgca ccaatcggcc
     2581 cgccaccatc ctgcttgcca tgccgctcgc cccgggatga gcgcgtcgat cgaaagacgg
     2641 ggaaaacacg tcacgacaaa cgggaggata aatatggacc gtcgtcattt cctgaagacc
     2701 gcgctggcaa cgacgagcgc catcgccggc acccgcgcct tggcgcaagc acccggtgac
     2761 gcgggctcat acccgaacca cacggtgacg ctcgtcgtcc cgttctccgc cggcagcatg
     2821 acggacatcc tggcgcgcac gctggccgag aagctgtccg aacgctggaa gcagaacgtc
     2881 gtggtcgaga accggcccgg aatcgccggc acggcgggtg tcgccaagac agcgcccgac
     2941 ggctacacgc tgatgctcac gtcgaacggg cacaccgtca tcaaggccgt caatccgaac
     3001 gtcgccttcg acccggtcaa ggatttcgtg gccgtcacgc cggtcgcctc gacgccgtcg
     3061 atcctgatcg tgccgccgga ttcgccgacc aagacgctga aggagctgat cgacacggcc
     3121 aaggccaagc ccggggcgct caattacagc tcggccggtc tcggcagctc gaccgggatc
     3181 gccgcggaac tgctcaagca gatcaccaag accaacctcg tggtcgttcc tcacaggggc
     3241 ctgcccgagt cgcagaccgc cgtgatccgc ggcgacgtcg ccatggcttt cacgttcttc
     3301 aacgtcggcg gcgacctgat ccagggcggc aagctgcgcg ccgtcgcggt gacgggcaac
     3361 aagcgcatga gccagcttcc cgacgtgccg accttcgccg aagcgggact gccggacttc
     3421 acttacgatt cctggttcgg cgtcttcgtg ccggccggca cccccaagcc gatcgtcgac
     3481 aaggtcgcca gggacgtggc ggcggcgctg caaggcgccg acgtgaaggc gcgcttcgat
     3541 ccgcaaggcg tggagatcgt ttcctcgacg cccgagaagt tcggcgaggt gctgcgcagc
     3601 gacgcggaac gctacggcgc cctgttcccg aagcaaggcg gctgaacctg cgaa
//
LOCUS       DATAIQ010001151         3417 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_81665, whole genome shotgun sequence.
ACCESSION   DATAIQ010001151 DATAIQ010000000
VERSION     DATAIQ010001151.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3417)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3417)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3417
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_81665"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..703
                     /locus_tag="VHN20_18990"
     CDS             <1..703
                     /locus_tag="VHN20_18990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727914.1"
                     /translation="IRQPKDLIGKKVGLKQFQATAILWMRGLLDQEYGVPFKSIEWFT
                     ELDESVDFTPPPDLKLTRLPHDKSVETMLAEGELDAVIHPDLIQPLIDRDSRVGRLFP
                     NYKEEEMAFYKRTGIFPIMHVLGIKQEVVDEHPWVPISLYNAFTEAKDLAMKRMQNPR
                     IVPLAWYREAWEEQEAILGDDPWEYGLGEENRKQLEMLVGFSHQHGQIKRAIPLDELF
                     LNVSQGRKRGHVFRI"
     gene            785..2233
                     /locus_tag="VHN20_18995"
     CDS             785..2233
                     /locus_tag="VHN20_18995"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HEX2727915.1"
                     /translation="MLQVTPKGQDLRSWIDRMEKAGELMRIKGAEREEEIGGIVDIYQ
                     RKMGRPALLFEDIPGYQPGYRVLANLFVSVKRIALTLGLPENTTEIELVRFWRDYFRD
                     APTIAPTPVESGSVLENVFTGKDIDLLKIPTPRWHEGDGGYYMGTACMVIMKDPESGW
                     INYGAYRVQVHDRAVASVMASKGKHGDIIMRKYHDRGEPCPIAVVVGVHPGLFSVAGL
                     EVPYGKNEYDAAGGLLGQSIKVIHGPKTGLPIPAEAEIAFEGFVHKDDRIDEGPLGEW
                     TGYYAGGVKKEPAIRVETFMHRDEPILTGAIPAVPPNDDTFYRGTYRAGAVWHELEAA
                     GVPEVKGVWSHEAGGSRMWLTVAIKQMYAGHSKQAGLIASQCHAGAYANRVVVVVDED
                     INPADMDQVVWSICTRCDPRDDVEILKGCWSTSLDPMSYPADKRNMNSRMVIDACTPW
                     NRLADWPAIVRSSKGLDERIRAKFAHYLPPGF"
     gene            2360..3220
                     /locus_tag="VHN20_19000"
     CDS             2360..3220
                     /locus_tag="VHN20_19000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011441995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein subunit M"
                     /protein_id="HEX2727916.1"
                     /translation="MKLPPFEYRSPTTLAEAVAILAAREGSARPLAGGQSLLPVLAFR
                     LAAPSVLVDLRRIPDLRRIMIDDTGVRLGAMTRWRDIEDDARLGTAHPLLVAAIAHVA
                     HYQIRNRGTVGGSLAHADPATEMPGIAVTCEATIEVMGASGARMVAAADLFVGPLTTS
                     LKGDEIITAVRLPFWPKARRWGFEEFSRRRGDYALAAVAVFYDQDETGRARNAHVGVI
                     GAADTPIRVAAAEQALNGKAVDDATIAAAAAAASDAVDPPDDIHAPAAYRRALVGTLL
                     ERALQRAASR"
     gene            3232..>3417
                     /locus_tag="VHN20_19005"
     CDS             3232..>3417
                     /locus_tag="VHN20_19005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011441985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HEX2727917.1"
                     /translation="MPVRFEVNGRAVSVDVPDRMTLADCLRQNLKLTGTHLGCEHGVC
                     GACTVIVDGEAVRACLML"
BASE COUNT          602 a         1163 c         1117 g          535 t
ORIGIN      
        1 catccgccag ccgaaggacc tgatcggcaa gaaggtcggc ctcaagcagt tccaggcgac
       61 cgcgatcctg tggatgcgcg gcctgctcga ccaggaatac ggcgtgccgt tcaagtcgat
      121 cgaatggttc acggagctcg acgagagcgt cgacttcacg ccgccgcccg acctcaagct
      181 gacgcgcctg ccgcacgaca agtccgtcga gaccatgctc gcggaaggcg agctcgacgc
      241 cgtgatccac cccgacctga tccagccgtt gatcgaccgt gactcgcgcg tcggccgcct
      301 ctttcccaac tacaaggagg aagagatggc gttctacaag cgcaccggaa tcttcccgat
      361 catgcacgtg ctcggcatca agcaggaggt cgtcgacgag catccgtggg tgccgatcag
      421 cctctacaac gccttcaccg aggccaagga cctggccatg aagcgcatgc agaacccgcg
      481 catcgtgccg ctcgcctggt atcgcgaggc ctgggaggag caggaggcga ttctgggtga
      541 cgacccgtgg gaatacggcc tcggcgagga gaaccggaag cagctcgaga tgctggtcgg
      601 gttctcccac cagcacgggc agatcaagcg cgccattccc ctggacgagc tgttcctcaa
      661 cgtctcgcaa gggcgtaaaa ggggccacgt gttcaggatc tgaagttgtc ccgcgccagc
      721 cggatcgggc gcgacgggcg ggtcgctttg gcctcccgaa gaagatctcg gaggagaaac
      781 gtttatgctg caagtgacgc ccaagggcca ggatctgagg tcgtggatcg accgcatgga
      841 gaaggccggg gaactgatgc gcatcaaggg cgccgagcgc gaggaggaga tcggcggcat
      901 cgtcgacatc taccagcgca agatgggccg ccctgccctc ctgttcgaag acattcccgg
      961 ctaccagccg ggctaccggg tgctcgccaa cctgttcgtc tcggtcaaac gcatcgccct
     1021 caccctcggg ctgcccgaga acaccacaga gatcgagctc gtgcgcttct ggcgcgacta
     1081 tttccgggac gcaccgacca tcgcgccgac ccccgtcgaa agcggctcgg tgctggagaa
     1141 cgtgttcacc ggcaaggata tcgacctcct caagatcccc accccgcgtt ggcacgaggg
     1201 cgacggcggc tactacatgg gcaccgcctg catggtgatc atgaaggacc ccgaatcggg
     1261 ctggatcaat tacggcgcct accgggttca ggtgcatgac cgcgccgtcg cctcggtgat
     1321 ggcctcgaag ggcaagcacg gcgacatcat catgcgcaaa taccacgatc gcggcgagcc
     1381 gtgcccgatc gcggtcgtcg tcggcgtgca tcctgggctg ttctcggtcg ccggcctcga
     1441 ggtgccgtac ggcaagaacg aatacgacgc cgccggcggc ctcctcggcc agtcgatcaa
     1501 ggtcatccac ggccccaaga ccggcctgcc gatcccggcc gaggccgaga tcgcattcga
     1561 aggtttcgtg cacaaggacg accgcatcga cgagggcccc ctcggcgagt ggaccggcta
     1621 ttacgccggc ggcgtgaaga aggagccggc gatccgcgtc gagaccttca tgcaccgcga
     1681 cgagccgatc ctcacgggcg ccattccggc ggtgccgccg aacgacgaca ccttctatcg
     1741 cggcacctac cgcgccggcg cggtgtggca cgagctcgag gcggccggcg tgccggaggt
     1801 caagggcgtg tggtcgcacg aggccggcgg cagccgcatg tggctcaccg tcgccatcaa
     1861 gcagatgtat gcgggccact ccaagcaggc cggcctgatc gcctcgcaat gccatgccgg
     1921 cgcctacgcc aaccgcgtcg tcgtggtggt cgacgaggac atcaatccgg ccgacatgga
     1981 ccaggtcgtg tggtcgatct gcacgcgctg cgatccgcgc gacgacgtcg agatcctcaa
     2041 aggctgctgg agcacgtcgc tcgacccgat gtcgtatccg gcggacaagc gcaacatgaa
     2101 ctcgcgcatg gtgatcgacg cgtgcacgcc gtggaatcgc cttgccgact ggccggcaat
     2161 cgttcgctcg agcaaggggc tcgacgagcg catccgcgcc aagttcgcgc actacctgcc
     2221 gccgggattc tgacgaggcg cttcccgtca ttgtcatggc gggcttgtcc aggccatccc
     2281 gatcggaaac gtcgttcctt tctcatcgag atcaccggca caaggccggt gatgacaacg
     2341 gtaaagtcat ataaggacga tgaagcttcc tccgttcgaa tacagatccc ccacaacgct
     2401 cgccgaggcg gtcgcgattc tcgcggcccg agagggctcg gcgcgtccgc ttgcgggcgg
     2461 ccagagcctg cttccggtgc tcgctttccg gctcgcggcg ccgagcgtcc tggtcgacct
     2521 gcgccgcatc cccgacctcc gccgcatcat gatcgacgac accggcgtcc gtctcggcgc
     2581 catgacgcgc tggcgcgaca tcgaggacga cgcgcggctg gggacggcgc atcccttgct
     2641 ggtggccgcg atcgcgcatg tggcgcatta ccagatccgc aaccgcggca ccgtcggcgg
     2701 cagccttgcc cacgccgacc ccgccaccga aatgccgggc atcgccgtga cctgcgaggc
     2761 cacgatcgag gtgatgggcg cgtccggcgc gcgcatggtg gcggcggccg atctgttcgt
     2821 cggcccgctc accacgtcgc tcaaaggcga cgagatcatc accgctgtgc gcctgccgtt
     2881 ctggccgaaa gcgcgccgct ggggtttcga ggagttttcg cgccggcgcg gcgattacgc
     2941 gctggcggcc gtcgcggtct tttacgacca ggacgagacg ggccgcgccc ggaacgccca
     3001 tgtcggcgtg atcggagcgg ccgatacgcc aatccgcgtc gccgccgccg agcaggccct
     3061 gaacggcaag gccgtcgacg atgcgaccat tgcagccgct gcggctgcgg cgtcggacgc
     3121 ggtcgatccg cccgacgaca ttcacgcgcc tgccgcctac aggcgcgcgc tcgtcgggac
     3181 gcttctcgag cgcgccttgc agcgcgccgc cagccgataa agagagtcgc gatgccagtt
     3241 cgtttcgagg tcaatgggcg cgcagtgagc gtcgacgtcc ccgaccgcat gacgttggcc
     3301 gactgcctgc gccagaatct aaagctcacc ggcacccatc tcggttgcga gcacggcgtg
     3361 tgcggggcct gcacggtcat cgtcgacggc gaggccgtgc gcgcctgcct gatgctg
//
LOCUS       DATAIQ010001152         4459 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_81850, whole genome shotgun sequence.
ACCESSION   DATAIQ010001152 DATAIQ010000000
VERSION     DATAIQ010001152.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4459)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4459)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4459
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_81850"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..504
                     /locus_tag="VHN20_19010"
     CDS             <1..504
                     /locus_tag="VHN20_19010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727918.1"
                     /translation="PLVEAKERGAGGGHIRFNMAKASLASHISQFPVGTYKKAHKHGP
                     GAHVIVLSGEGYSLMWPEGEEPRRYDWQPGTMIVPPTAWFHQHFNSGPTPARYLAFKH
                     FSPRNAQGVPMSWISRRQGGNQIDYADETKEVRTMFADALARHGLKPRMDDVYAAERA
                     ILDAQVA"
     gene            683..1417
                     /gene="aqpZ"
                     /locus_tag="VHN20_19015"
     CDS             683..1417
                     /gene="aqpZ"
                     /locus_tag="VHN20_19015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010683050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015250 - water channel activity [Evidence
                     IEA];
                     GO_process: GO:0006833 - water transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aquaporin Z"
                     /protein_id="HEX2727919.1"
                     /translation="MHIRKCAAEAIGTFWLTFAGCGSAVIAAGFPEVGIGLLGVSLAF
                     GLTVLTMAYSIGHISGCHLNPAVTVGLAAGGRFPFRDVGSYVVSQVVGAVLAAFLLYV
                     IARGAPGFDLAKGFAANGYAEHSPGKYGLPSAFVAEVVLTAAFLFIIMGSTHGKAPAG
                     FAPIAIGLGLTLIHLVSIPVTNTSVNPARSTGPAIFVGGWAIAQLWLFWVAPLIGGML
                     GGVLYRWLSDEPSAQVTGVAPATPAE"
     gene            complement(1463..2581)
                     /locus_tag="VHN20_19020"
     CDS             complement(1463..2581)
                     /locus_tag="VHN20_19020"
                     /inference="COORDINATES: protein motif:HMM:NF014136.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX2727920.1"
                     /translation="MAKDAIVSDELARKFATEKDTPYTRWVRAEGLEIISGHYVRNLR
                     NVDLKPWPRRGGKGVYINHDASRTSNDCYVCEIPAGKSLAPQRQLYEEMILILDGRGS
                     TTVWNDAGKRITFEWKAGAIFAIPLNAWHQHFNGSGQEPVRYVAVTNRPPVMNLYEDV
                     EFIFNTPYDFKNRFNGEPDYFSAKTEQQGLRLDTNFIADAVNLPLASAKERGAGGGHI
                     RFNMAKGSLPSHISQFPVGTYKKAHAHGPSAHVIILSGEGYSLMWPEGAEPKRYDWEV
                     GSLIVPPNMWFHQHFNTGTTPARYLAFKHEVALIRNGQGVPTCWYSRRIGGDQIDYAD
                     ETPVIRTMFAEALAKHGLKPRMDDAYAAEASDLPAKVA"
     gene            complement(2637..3476)
                     /locus_tag="VHN20_19025"
     CDS             complement(2637..3476)
                     /locus_tag="VHN20_19025"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX2727921.1"
                     /translation="MREGRYCLVDGIRTHYFEAGTEHRGRRPSVLLLHSAEYGGAAEF
                     SWEFNIEALAQRYHVVAPDHLGFGLTDKIFDFNGQFERRIAHIRRFLEVGGVSRVHVM
                     GSSMSGGMSLAVAARQEPDWPIVTLTVCSGGGDAPDNEARRILNTYDGTREHMRRIVE
                     VMFVDRKWAEDEAYIERRWEMATLPGAWEATSAARFKAPFRGPPARRERDNIAYAAIR
                     VPTLVFAGRLDPLRKPNYTDEFVPLIPDASLHMFERAAHMGNIECADEFNTTVLQFLK
                     ERD"
     gene            complement(3473..>4459)
                     /locus_tag="VHN20_19030"
     CDS             complement(3473..>4459)
                     /locus_tag="VHN20_19030"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX2727922.1"
                     /translation="EHHQTATCLNAAAPLMASILARQTSKARICILGNPIANRGDPIR
                     IAEEMAIIDCLSRGRLDCGFVRGVPYEVFAANTNPTQTVERLWEGVDLVVKAWTSHEG
                     PFNFEGRFWHKRAVNVWPRPYQAPHPQVWITGSSDKEGIKKVADRGYVFATFLQPHDK
                     VREMFDVYRAHFVERGLPGGGGTAFMPLVYTADSEAEAEKGAQELTWYMKAKTEPQFR
                     NPPGYVPVAFNVKALQGAYSGRTDAMRSLKLEDQREKGVIMYGTPDSVVEQVKRFYDR
                     VGGFDHLLMMQQAGFLDHQRTVRSMTLFAKEVYPQIKDLPRTQPKKAMAAAQ"
BASE COUNT          685 a         1473 c         1497 g          804 t
ORIGIN      
        1 ccgctcgtcg aggcgaagga gcgcggcgcc ggcggcggcc acatccgctt caacatggcc
       61 aaggcctcgc tcgccagcca catctcgcaa ttcccggtcg gaacctacaa gaaggcccac
      121 aagcacggcc ctggcgcgca cgtgatcgtg ctcagcggcg agggctactc gctgatgtgg
      181 ccggaaggcg aggagccgcg ccgctacgac tggcagcccg ggacgatgat cgtgccgccg
      241 actgcctggt ttcaccagca cttcaactcc gggccgacgc cggcgcgcta cctcgcgttc
      301 aagcatttct cgccgcgcaa cgcgcaaggg gtgccgatgt cgtggatcag ccggcgccag
      361 ggcggcaacc agatcgacta cgccgacgag acgaaggagg tgcgcaccat gttcgccgat
      421 gcgctcgcca ggcacgggct caagccgcgc atggacgacg tctacgccgc cgagcgcgcg
      481 atcctcgacg cacaggtggc gtgagccgaa gaggcgcgca tttgcggtca agggcggcgt
      541 ttgccatggc tgttcgccat ggcgcccggc tgctaagctg gcccgactaa aggcgacccg
      601 tgcgcgttca ccaggctcgt gtcaggtcct ttggatcgac cattgccgac atcgctcccc
      661 acccaacaag gaaaccgagc tcatgcacat tcggaaatgc gccgccgaag cgatcggcac
      721 gttctggctt acatttgccg ggtgcggcag cgccgtcatc gccgccggtt tccccgaagt
      781 gggcatcggg ctgcttggcg tctcgctggc cttcgggctc accgttctca cgatggccta
      841 ttcgatcggc cacatctcgg gctgccatct caatcccgcc gtcacggtcg gcctcgcggc
      901 cggcggacgc ttccccttca gggatgtcgg ctcctacgtg gtatcgcagg tggtcggtgc
      961 agtcctggct gccttcctcc tctacgtgat cgcgagagga gcaccgggct tcgacctcgc
     1021 caagggcttc gcagcgaacg gctacgcaga gcattctccc gggaaatacg gcctgccctc
     1081 tgcattcgtt gccgaggttg tcctcaccgc ggcattcctg ttcatcatca tggggtcgac
     1141 ccatggcaaa gcccccgccg gtttcgcgcc gatcgcaatc ggtcttgggc tcacgctgat
     1201 ccatctggtc agcatcccgg tgaccaacac ctccgtgaac ccggcccgga gcaccgggcc
     1261 cgccatcttc gtgggtggct gggcgatcgc ccagctgtgg ctgttctggg tcgctcccct
     1321 gatcgggggc atgctcggtg gcgttcttta ccggtggctc agtgacgaac catcggcgca
     1381 ggtcacgggc gtcgcgcccg caaccccggc cgaataatcc gacggcggaa aaacctgctc
     1441 cctgcgggga gaggcgatcc cgtcacgcca ccttggcagg caggtcggat gcttccgcgg
     1501 cgtaggcgtc gtccatgcgc ggcttgaggc cgtgttttgc cagggcctcg gcgaacatgg
     1561 tgcggatgac gggcgtctcg tcggcatagt cgatctggtc gccgccgatg cggcggctgt
     1621 accagcaggt cggcacgccc tggccgttgc ggatcagcgc gacctcgtgc ttgaaggcca
     1681 gatagcgcgc cggcgtcgtg cccgtgttga agtgctggtg gaaccacatg ttcgggggca
     1741 cgatcagtga accgacctcc cagtcatagc gcttcggctc ggcgccttcc ggccacatca
     1801 gcgagtagcc ctcgccgctc aggatgatga cgtgggcgct cgggccgtgc gcatgcgcct
     1861 tcttgtaggt gccgaccggg aattgcgaga tgtggctcgg cagcgagccc ttggccatgt
     1921 tgaagcggat gtggccgccg ccggcgccgc gctccttggc gctggcgagc ggcaggttga
     1981 ccgcgtcggc gatgaagttg gtgtcgagcc gcaggccctg ctgctcggtc ttggcggaaa
     2041 aatagtcggg ctcgccgttg aagcggttct tgaagtcgta aggcgtgttg aagatgaact
     2101 cgacgtcctc gtagaggttc atcaccggcg gcctgttggt caccgcgacg tagcgcaccg
     2161 gctcctggcc cgagccgttg aaatgctgat gccacgcgtt gagcgggatg gcgaagatgg
     2221 cgccggcctt ccattcgaag gtgatgcgct tgccggcgtc gttccacacg gtggtcgaac
     2281 cgcgcccgtc gaggatcagg atcatctcct cgtaaagctg gcgctgcggc gcaaggctct
     2341 tcccggccgg gatctcgcag acgtagcaat cgttcgaggt gcgcgacgcg tcgtgattga
     2401 tgtacacgcc cttgccgccg cggcgcggcc acggcttcag gtcgacgttg cgcaggttgc
     2461 ggacgtagtg gccgctgatg atctcgaggc cctcggcccg cacccagcgc gtgtacggcg
     2521 tgtccttctc ggtggcgaac ttcctcgcca gctcgtccga aacgatcgcg tccttggcca
     2581 tgcgtctcct ccgatatcgt tatccgtgac cgccccgaag gccgctcgag aggcgatcaa
     2641 tccctttcct tcaggaactg cagcaccgtc gtgttgaact cgtcggcgca ttcgatattg
     2701 cccatatggg cggcccgctc gaacatgtgc aggctcgcgt ccgggatcag cggcacgaac
     2761 tcgtccgtgt agttcggctt gcgcagcgga tcgaggcggc cggcgaagac cagcgtcgga
     2821 acgcggatgg ccgcataggc gatgttgtcg cgctcgcggc gggccggagg cccgcggaac
     2881 ggcgccttga agcgcgcggc ggaggtcgcc tcccaggcgc cgggcagcgt cgccatctcc
     2941 cagcggcgct cgatataggc ctcgtcctcg gcccatttgc ggtcgacgaa catcacctcg
     3001 acgatgcggc gcatatgctc gcgcgtaccg tcgtaggtgt tgaggatgcg gcgcgcctcg
     3061 ttgtccgggg cgtcgccgcc gccggagcac acggtgagcg tcacgatcgg ccagtccggc
     3121 tcctggcgcg ccgccaccgc gaggctcatg ccgccggaca tcgagctgcc catcacgtgc
     3181 acccggctga cgccgccgac ctcgagaaaa cgccggatat gggcgatgcg gcgctcgaac
     3241 tggccgttga agtcgaagat cttgtcggtg aggccgaagc cgaggtggtc cggcgcaacg
     3301 acatgatagc gctgcgcaag agcctcgatg ttgaactccc acgagaactc ggcggcgccg
     3361 ccgtattcgg ccgagtgcag gagcagcacg ctcggccgcc ggccccgatg ctcggtgccg
     3421 gcttcgaaat aatgcgtgcg gatgccgtca acgaggcaat accggccttc tctcattgcg
     3481 cggccgccat cgccttcttc ggctgcgtgc gcggcaggtc cttgatctgc ggatacactt
     3541 ccttggcgaa cagtgtcatg ctgcgcaccg tgcgctggtg atcgaggaag ccggcctgct
     3601 gcatcatcag gaggtggtcg aagccgccga cccggtcgta gaagcgcttg acctgctcca
     3661 ccaccgaatc gggcgtgccg tacatgatga cgcccttctc gcgctgatcc tcgagcttga
     3721 ggctgcgcat ggcgtcggtg cggcccgaat aggcgccctg cagcgccttg acgttgaacg
     3781 cgaccggcac gtagccgggc ggattgcgga actgcggctc ggtcttggcc ttcatgtacc
     3841 aggtgagctc ctgcgcgccc ttctcggcct ccgcctcgga atcggccgtg tagacgagcg
     3901 gcatgaaggc cgtgccgccg ccgcccggca gcccgcgctc gacgaaatgc gcgcggtaga
     3961 cgtcgaacat ctcgcgcacc ttgtcgtggg gctgcaggaa cgtggcgaac acgtagccgc
     4021 ggtcggcaac cttcttgatg ccttccttgt cgctcgagcc ggtgatccac acttgcgggt
     4081 gcggcgcctg gtaggggcgc ggccacacgt tgacggcacg cttatgccag aagcggcctt
     4141 cgaagttgaa cgggccctcg tgcgaggtcc acgccttgac gacgaggtcg acgccttccc
     4201 agagccgctc gaccgtctgc gtcggattgg tgttggcggc gaacacctca tagggcacgc
     4261 cgcgcacgaa gccgcagtcg aggcggccgc gcgataggca gtcgatgatc gccatttcct
     4321 cggcgatgcg gatcgggtcg ccgcggttgg cgatcgggtt gccgaggatg cagatgcgcg
     4381 ccttgctggt ctggcgcgcc aggatcgatg ccatcagggg cgccgcggcg ttgaggcagg
     4441 tcgccgtctg gtgatgctc
//
LOCUS       DATAIQ010001153         4036 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_82007, whole genome shotgun sequence.
ACCESSION   DATAIQ010001153 DATAIQ010000000
VERSION     DATAIQ010001153.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4036)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4036)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4036
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_82007"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..900
                     /locus_tag="VHN20_19035"
     CDS             <1..900
                     /locus_tag="VHN20_19035"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX2727923.1"
                     /translation="CQERRSGMDVRTAPLSGGSFSPHRIADRMIPGRDGLPALELIEA
                     GPEGPRTGAPILFLHGAFGGAWMWREIFMPYFARRGRASLAVSVRGHGNSEGLAELRN
                     WGLSDYLDDIRRVFAELDEAPVVIAHSLGGLLAQMLIGREPMRALALLGSLPPEGLML
                     ESPRLAITDTPIWIEAFVGSMAQKKLPIALAAHRILFSEGLPRERVMQYSARMTPESP
                     RALADAHLPLPVASAFLYAIPTLVMRGAEDRLVWQASALRTALYHGAAYRMAEAQGHF
                     LQLDIGAETVARNVMAWIDGLDL"
     gene            complement(1097..2509)
                     /gene="pyk"
                     /locus_tag="VHN20_19040"
     CDS             complement(1097..2509)
                     /gene="pyk"
                     /locus_tag="VHN20_19040"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020093061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004743 - pyruvate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HEX2727924.1"
                     /translation="MRRDRHAKIVATVGPASSSPEMLRALFMAGVDTFRLNFSHGAQQ
                     DHAKVHAAIRALEKDVDRPIGIMQDLQGPKIRVGTVAGGKLEVAAGETIRFVLKGSDG
                     DKQAIPLPHREIFAAVMPGQELLIDDGRVRVRVVGLEDDAIRAEVVIGGTISNRKGVN
                     LPGTMLDLSPLTEKDRADLAFGLELGVDWVALSFVQKPGDLIEARGLIRDRAGIMTKV
                     EKPQAFDRIDDIVRLSDAIMVARGDLGVEIPHEDVPGRQKELVRACRLAAKPVVVATQ
                     MLDSMVNAPTPTRAEASDVATAIYDGADAVMLSAESATGRYPVEAVAMMARIICRTEQ
                     HKHYRSLIAASDPGEEDTAPHAVAAATASLADAIGAATIVVYTLSGTTAARIARRRPV
                     VPILALTPELGTARRLSLLWGAHSLRSDEVSTYEEMVAGAAAHAVEEGFAKSGDLVAI
                     AAGIPFAVAGTTNNIRIAQV"
     gene            complement(2714..3790)
                     /locus_tag="VHN20_19045"
     CDS             complement(2714..3790)
                     /locus_tag="VHN20_19045"
                     /EC_number="1.1.1.93"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019998675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009027 - tartrate dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0046395 - carboxylic acid catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tartrate dehydrogenase"
                     /protein_id="HEX2727925.1"
                     /translation="MRTHRIAAIGGDGIGPEVIAAGLQALEVCAERDGGFKLEVEHFD
                     WGSDYYKKHGVMMPDDGADRLRKFDAIYFGAVGAPDIPDHITLWGLRLAICQPLDQYA
                     NVRPTRILPGITSPLRHVSGPELDWVIVRENSEGEYAGVGGRVHRGLPEEAATDVAMF
                     TRAGVSRIIRYAFQVARSRPRKLLTVVTKSNAQRHGMVMWDEIAAEVAREFPDVTWDK
                     MLVDAMTVRMTMRPRSLDTIVATNLHADILSDLAAALAGSLGIAPTANLNPERKTPSM
                     FEPIHGSAFDITGKGIANPVATFWTGAMMLEHLGEKAAAVRLMRAVERVTGDPTLHTP
                     DLGGKATTRQVTDAVCEALRGDNI"
     gene            3963..>4036
                     /locus_tag="VHN20_19050"
     CDS             3963..>4036
                     /locus_tag="VHN20_19050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015315168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/glutamate racemase"
                     /protein_id="HEX2727926.1"
                     /translation="MKTLGLIGGMSWESTAIYYRHLNLL"
BASE COUNT          588 a         1370 c         1416 g          662 t
ORIGIN      
        1 tgccaggaga gacgatcagg catggatgtc cgcaccgcgc ccctgtccgg cggaagtttc
       61 agtccgcatc ggatcgccga tcgcatgatc ccgggccgcg acggcctgcc cgcgctcgag
      121 ctgatcgagg cggggccgga aggaccgcgg accggcgctc ccatcctgtt cctgcacggc
      181 gctttcggcg gcgcctggat gtggcgcgag atcttcatgc cgtatttcgc ccggcgcggg
      241 cgcgcgtcgt tggccgtgag cgtgcgcggc cacggcaaca gcgaaggcct ggccgagctg
      301 cgcaactggg gcctgtccga ctacctcgac gacatccgcc gcgtcttcgc cgagctcgac
      361 gaggcgccgg tcgtgatcgc ccattccctc ggcggcctgc tcgcgcagat gctgatcgga
      421 cgcgagccga tgcgcgcctt ggccctgctc ggttccttgc cgcccgaagg gctcatgctc
      481 gaaagcccgc ggctggcgat caccgatacg cccatctgga tcgaggcgtt cgtcggctcg
      541 atggcgcaaa agaagctccc gatcgccctc gcggcgcacc ggatcctgtt ctccgaaggc
      601 ctgccgcgcg agcgcgtcat gcagtattcc gccaggatga cgccggaatc gccgcgcgcc
      661 cttgccgacg cgcatctgcc gctgccggtc gcgtcggcct tcctgtatgc cattccgacc
      721 ctggtgatgc gcggcgccga ggaccgcctc gtctggcagg cctccgcgct tcgcaccgcg
      781 ctctatcacg gcgccgccta ccgcatggcc gaggcccaag gccatttcct gcagctcgac
      841 atcggcgccg agacggtggc gcgcaacgtc atggcgtgga tcgacgggct ggatctgtga
      901 gcgctgcggc gcgagagctc gcgtcgcgct cctccgactg taatcaccgg gctcgtcccg
      961 gtgatctcga tacaaagggg ctccccttcc gatcgggatg gctgtacccg gatcagccct
     1021 ttgggctgtc cgggcactaa agggacacca agcccggcca tgacgattag aggagaagat
     1081 ctgggcccgc gcgcggtcac acctgggcga tgcggatgtt gttggtcgtg cccgcgaccg
     1141 cgaagggaat gccggccgcg atggcgacga gatcgccgga tttcgcgaaa ccttcctcga
     1201 ccgcatgggc ggcggcgcca gccaccatct cctcgtaggt gctgacctcg tccgagcgca
     1261 ggctgtgcgc gccccagagc aggctgaggc gccgtgccgt gcccagctcc ggcgtcagcg
     1321 cgaggatcgg cacgaccggg cgccggcgcg cgatgcgcgc ggcggtggtg ccgctcaagg
     1381 tgtagacgac gatcgtcgcg gcgccgatcg cgtcggcgag gctcgccgtc gcggcggcga
     1441 cggcgtgcgg cgccgtatcc tcctcgcccg gatcggaggc ggcgatgagc gagcggtaat
     1501 gcttgtgctg ctccgtgcgg caaatgatgc gggccatcat ggcgacggcc tcgaccgggt
     1561 agcgccccgt ggcggactcg gctgacagca tcaccgcatc ggcgccgtcg tagatcgcgg
     1621 tcgccacgtc ggaggcctcg gcgcgggtcg gcgtcggcgc gttgaccatc gagtcgagca
     1681 tctgcgtcgc gaccaccacc ggcttggcag cgagacggca ggcccgtacc agctccttct
     1741 ggcggccggg cacgtcctcg tgcgggatct cgacgccgag gtcgccgcgc gcgaccatga
     1801 tcgcgtcgga caggcgcacg atgtcgtcga tgcggtcgaa agcctgcggc ttctcgactt
     1861 tcgtcatgat gccggcgcgg tcgcggataa gcccgcgcgc ctcgatcagg tcgccgggct
     1921 tctgcacgaa ggacagcgcc acccaatcga cgccgagctc gagcccgaag gccaggtcgg
     1981 cgcggtcctt ctcggtcagc ggcgacaggt cgagcatcgt gccgggcagg ttcacgccct
     2041 tgcggttcga gatcgtgccg ccgatcacga cctccgcccg gatcgcgtcg tcctcgaggc
     2101 cgaccacgcg cacgcgcacg cggccgtcgt cgatcaggag ctcctggccc ggcatgacgg
     2161 cggcgaatat ctcccgatgc ggcagcggga tcgcctgctt gtcgccgtcc gaacccttga
     2221 ggacgaagcg aatggtctcg cccgccgcaa cctcgagctt tccgccggcg accgtgccga
     2281 cgcggatctt cggcccctgc aagtcctgca tgatgccgat cggccggtcg acgtccttct
     2341 cgagcgcccg gatggcggca tggaccttgg cgtggtcctg ctgcgctccg tggctgaaat
     2401 tcagccggaa cgtgtccacc cctgccatga acagggcgcg cagcatctcc ggcgacgagc
     2461 tcgccgggcc cacggtggca acgatcttgg catgacggtc acggcgcatg atgcgttcgg
     2521 ccacgagcgg ccgcctcctt cgggactggc gcatgacccg cgaaagccca cgcctgtgga
     2581 accgaccagg ggcaggttcc gcttcgtcga ggacgatcat gcgattcggc ggggacatta
     2641 gagcgggagc ggctcaatct gaagccgttc ccgcgaatcg ccggtgcacg atcggtcaaa
     2701 gcgaggcggc ggctcagatg ttgtcgcccc gcagcgcctc gcagaccgcg tcggtgacct
     2761 gcctggtcgt cgccttgccg ccgaggtcgg gcgtgtgcag ggtcgggtcg cccgtcacgc
     2821 gctcgacggc gcgcatgagc cgcacggccg cggccttctc gcccagatgc tcgagcatca
     2881 tcgcgcccgt ccagaaggtg gcgaccgggt tggcgatgcc cttgccggtg atgtcgaagg
     2941 ccgagccgtg gatcggctcg aacatcgagg gcgtcttgcg ctcggggttc aggttggcgg
     3001 tcggggcgat gccgagcgag cccgccagcg ccgcggcgag atccgacagg atgtcggcat
     3061 gcaggttggt ggcgacgatc gtatcgagcg agcgcggccg catggtcatg cgcaccgtca
     3121 tggcgtcgac cagcatcttg tcccaggtga cgtccgggaa ttcgcgcgcc acctcggcgg
     3181 cgatctcgtc ccacatcacc atgccgtggc gctgggcgtt cgacttggtc acgacggtga
     3241 gcagcttgcg cgggcgcgag cgcgccacct ggaaagcgta gcggatgatg cggctcacgc
     3301 cggcgcgggt gaacatggcg acgtccgtcg cggcctcctc gggcagcccc ctgtgcacgc
     3361 gcccgccgac gccggcgtat tcgccttccg agttctcgcg cacgatcacc cagtcgagct
     3421 ccgggccgga gacgtgccgg agcgggctcg tgatgccggg caggatgcgc gtcgggcgta
     3481 cgttggcgta ttgatcgagg ggctggcaga tcgccaaccg caggccccac agggtgatgt
     3541 ggtcggggat gtcgggcgcg ccgacggcgc cgaaatagat ggcgtcgaac ttgcgcaggc
     3601 ggtcggcgcc gtcgtccggc atcatgacgc cgtgcttctt gtagtagtca gagccccagt
     3661 cgaaatgctc gacctcgagc ttgaagccgc cgtcgcgctc ggcgcagact tcgagggcct
     3721 gaaggcctgc ggcgatcact tccgggccga tgccatctcc cccgatggcg gcgatgcgat
     3781 gcgtgcgcat ggtgattcct ttcgagcctt ttccagcttt attgtgcttg gatggaagct
     3841 cgatgccgga tcgcacaagc ggcagcagaa gggaaggcct gccgggtgct cgccggcggc
     3901 aacgccgttc cgcggatcgc tcctgacgcg cgatcgccgg cgggcgaaaa ggaggaggcg
     3961 tattgaagac gttgggcctg attggtggca tgagctggga gagcacggcc atctattacc
     4021 ggcatctgaa cctgct
//
LOCUS       DATAIQ010001154         2103 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_173646, whole genome shotgun sequence.
ACCESSION   DATAIQ010001154 DATAIQ010000000
VERSION     DATAIQ010001154.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2103)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2103)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2103
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_173646"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..607)
                     /locus_tag="VHN20_19055"
     CDS             complement(<1..607)
                     /locus_tag="VHN20_19055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019904352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidogalycan biosysnthesis protein"
                     /protein_id="HEX2727927.1"
                     /translation="MSGKNATDFRVKIATGLKAVSSEQWDACANPLPARRAANGSLPT
                     HDTSESFNPFASHAFLSALEESGCVSGRTGWAPAHLLVEDGDTRLVGAAPCYLKSHSL
                     GEYVFDHAWADAYARAGGHYYPKLQVSVPFTPVTGPRLLLAPGASATRARAALVAGLR
                     ALRADTDASSIHLTFLPEEDSARLASDGFLLRTGQQFHWFNE"
     gene            complement(780..1526)
                     /locus_tag="VHN20_19060"
     CDS             complement(780..1526)
                     /locus_tag="VHN20_19060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020094161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008081 - phosphoric diester hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase family
                     protein"
                     /protein_id="HEX2727928.1"
                     /translation="MSAPAWLVARPIAHRGLHDRAAGVIENTLSAAEAAIEAGFAIEC
                     DVQDTSDGEAVVFHDHTLERLTAEKGAVRAQRAADLTGLAIASTRDRIPTLQAFLACI
                     AGRTPLIIEIKSRFDGDMALTRRAIEVVQGYKGPVALKSFDPAVVETLREAAPDLPRG
                     IVAESRYDHPEWDRLGDDKKRELANLLHFPRTAPDFLSWRVHDLPSAAPFLCRHLART
                     PVMTWTVRSDADRRRAAAHADQMVFEGFRP"
     gene            complement(1523..1993)
                     /locus_tag="VHN20_19065"
     CDS             complement(1523..1993)
                     /locus_tag="VHN20_19065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012319287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEX2727929.1"
                     /translation="MSEVDKKLAELGVTLPTPSAPVANYVPFVRTGNLVVVSGQVCLG
                     PDGKLGEAHKGKVGAEVSPEAARDAARLCAINVLAQLKAAIGDLDNAVRCVRLGGFIN
                     ATPTFGALPGVMNGASDLMVAVLGDKGRHARTTVGVAELPFDAAVEVEAIFEVR"
BASE COUNT          347 a          696 c          739 g          321 t
ORIGIN      
        1 cctcgttgaa ccagtggaac tgctgccccg tgcgcaggag gaatccatcg ctcgccaggc
       61 gcgcactgtc ctcttcgggc aggaaggtga ggtggatgga cgaggcgtcc gtgtcggcgc
      121 gtagcgcgcg cagccctgcg acgagcgcgg ccctcgcccg ggtcgcggac gcgcccggcg
      181 cgagcagcag acgaggtccg gtcaccggcg tgaacggaac gctgacctgc agcttggggt
      241 aatagtgccc gccggcacgg gcataggcat cggcccaggc gtggtcgaaa acgtattcgc
      301 cgagcgaatg cgacttcaga tagcacggcg ccgccccgac caggcgggtg tcgccatcct
      361 cgaccaggag gtgggcgggg gcccagccgg tgcggccgga cacgcagccc gattcctcga
      421 gagccgacag gaaggcgtgg gacgcgaacg gattgaagct ttccgacgtg tcgtgcgtag
      481 gcaacgagcc attcgccgcg cgacgggcgg gcagcgggtt ggcgcacgcg tcccattgct
      541 cggaagagac ggctttcagg cccgtggcga ttttgacccg gaagtctgtc gcgttcttgc
      601 cgctcatgcc cccgacttac gtatcagggc tccatgcgac aagcccgagg gcgccgcagc
      661 gcaatgacgc gactgcgaaa accatccctt ccctatgtgc ggccggggag gggagccaac
      721 gcgagcaaca cagcggcgac caacgcggaa gctggcattt cccgcgggat ccggagacgt
      781 cagggccgga aaccctcgaa gaccatctgg tcggcgtggg cggcggcgcg gcgccggtcc
      841 gcgtcgctgc gcaccgtcca ggtcatgacg ggcgtgcggg cgaggtgccg acagaggaat
      901 ggagcggcag agggcaggtc gtggacgcgc caggagagga aatcgggcgc ggtgcgcgga
      961 aagtgcagca ggttggcgag ctcgcgcttc ttatcgtctc cgagcctgtc ccactccggg
     1021 tggtcgtagc ggctctccgc cacgattcca cggggcaggt ccggcgcggc ttcgcgcagc
     1081 gtctccacca ccgcagggtc aaacgatttg agcgccaccg ggcccttgta gccctggaca
     1141 acctcgatgg cgcgccgcgt cagggccatg tcaccgtcga agcggctctt gatctcgatg
     1201 atcagtggcg tgcgtccggc gatgcacgcg agaaaggcct gcagcgtcgg aatgcggtcg
     1261 cgcgtcgacg cgatggctag cccggtcagg tccgcagcac gctgcgcccg cactgcacct
     1321 ttttcggccg tcagccgctc gagcgtgtga tcgtggaaga cgacagcctc gccgtcggag
     1381 gtatcctgca cgtcgcactc gattgcaaag ccggcctcga tcgcggcctc ggccgccgac
     1441 agcgtattct cgatgacgcc ggcggcccgg tcgtgcagac cgcggtgggc gatgggacgc
     1501 gcgacgagcc aggcgggagc gctcatcgca cctcgaagat cgcctcgacc tcgacggcgg
     1561 catcgaacgg cagctcggcc acgcccacgg tcgtgcgcgc atggcggccc ttgtcgccga
     1621 gcacggcgac catcaggtcg gaggcgccgt tcatgacgcc cggaagcgcg ccgaaggtgg
     1681 gcgtcgcgtt gatgaagccg ccgagacgca cgcagcgtac cgcattgtcc aggtcaccga
     1741 tcgcggcctt gagctgcgcc agcacgttga ttgcacacag gcgggcggcg tcgcgcgccg
     1801 cttccggcga gacttctgct ccgaccttgc ccttgtgggc ttctccaagc ttgccgtcgg
     1861 gaccgaggca aacctggccc gacacgacga cgagattgcc ggtgcgcaca aacggcacat
     1921 aattcgcaac cggcgccgac ggcgtcggca gggtgacgcc gagttctgcg agtttcttgt
     1981 cgacttcgct catgcaaaca cctctcgcgc tgtcgccgcg ttgtggcgga ttgggctccg
     2041 ggacgcaagg cgcgtcgttg cgacaaccta aatctatacc cggctccccc cgtcggctat
     2101 gtg
//
LOCUS       DATAIQ010001155         1654 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_82276, whole genome shotgun sequence.
ACCESSION   DATAIQ010001155 DATAIQ010000000
VERSION     DATAIQ010001155.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1654)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1654)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1654
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_82276"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..858
                     /locus_tag="VHN20_19070"
     CDS             <1..858
                     /locus_tag="VHN20_19070"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HEX2727930.1"
                     /translation="RENDLRKAKEAAEAAMAELKEAQANLIQAEKLASLGQLVAGVAH
                     EINTPIGVALTTSTALSREIIVLDEKVKSGRIARSDLHGILGRLAEGGQLIFANLTRA
                     IDLIHSFKQVSADRASGEQRAFELRSWLQEVVTSLGPVLRKGGHHVVVDCPDGFILTS
                     YPGALAQVLTNLTMNAVTHAFPAGIPGTIRLMILPSSPGWLTLVFADDGVGIAEAYRQ
                     KVFDPFFTTGRDRGSTGLGLHIVHNLVTVTLQGRIDLQSTPGQGTTFIIEIPVAVDEA
                     RPELLFLSA"
     gene            870..>1654
                     /locus_tag="VHN20_19075"
     CDS             870..>1654
                     /locus_tag="VHN20_19075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015928451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX2727931.1"
                     /translation="MQRLILAAAAAIAIAGPVQAKTLVYCSEGNPEALNPQLATTTTG
                     MSAVRPMFNNLVEFEPVATQVVPGLAESWSVSEDGQQYTFRLRRNVKFHANATFKPTR
                     EMNADDVLFSLMRQWKEDHPYHRVSDARYDYFKDLGMKELLRDIEKIDDHTVRITLTR
                     PEAPFLANLAMPFNSILSAEYAELLLRAGNPQQLDTDPIGTGPFVFAGFQKDVAVRYR
                     AFADYWGGRQPVDTLVFSITANPGVRLTKLKAGECHIMAFPDPA"
BASE COUNT          308 a          574 c          506 g          266 t
ORIGIN      
        1 cgggagaacg acctgcgcaa ggccaaggag gccgccgagg ccgcgatggc ggagctcaag
       61 gaagcgcagg cgaatctgat ccaggcggaa aagctcgcgt cgctcgggca actggtggcc
      121 ggcgtcgcgc acgagatcaa cacgccgatc ggcgtcgcac tgaccacgtc gacggcgctc
      181 agccgcgaga tcatcgttct cgacgagaag gtgaagtccg ggcgcatcgc ccgttccgac
      241 ctgcacggca tcctcggccg gcttgccgag ggcggtcagc tgatcttcgc caacctgact
      301 cgcgcgatcg acctgatcca cagcttcaag caggtctccg ccgaccgcgc cagcggcgag
      361 cagcgcgcct tcgagctgcg aagctggctt caggaggtcg tcacgagcct cgggccggtg
      421 ctgcgcaagg gcggccacca cgtcgtggtc gattgtccgg acggattcat cctgaccagc
      481 tacccgggcg ccctggccca ggtgctcacc aatctcacaa tgaacgcggt cacccacgcc
      541 tttccggcgg gaattcccgg cacgatccgc ctgatgatcc tgccatccag ccccggctgg
      601 ctgacgctgg tcttcgccga cgatggcgtc ggcatcgcag aggcgtatcg gcaaaaagtc
      661 ttcgacccgt tcttcaccac cggccgcgac cgcggcagca ccggcctcgg tctgcacatc
      721 gtgcacaacc tcgtcaccgt gacgctgcaa ggccggattg atctgcagag cacgcccgga
      781 caagggacga cattcatcat cgagatcccg gtcgccgtcg acgaggcccg gccggaactg
      841 cttttcctct cagcctgaag cgaaacccca tgcagcgcct catcctcgcc gccgccgcgg
      901 ccatcgccat tgccggcccc gtgcaagcaa aaaccctcgt ctattgttcg gaaggcaatc
      961 cggaagcgct caacccgcag ctcgccacca ccacgaccgg catgagcgcg gtgcggccga
     1021 tgttcaacaa tctggtcgag ttcgagccgg tggcgacgca ggtcgtgccg ggcctggcgg
     1081 agtcgtggtc ggtttccgaa gatggccagc aatacacgtt ccgcctgcgc cggaacgtca
     1141 agttccacgc caatgcgacg ttcaagccga cgcgcgagat gaacgccgac gacgtgctct
     1201 tctcgctgat gcggcaatgg aaggaggacc atccgtacca ccgcgtctcg gatgcacgct
     1261 acgactattt caaggacctc ggcatgaagg agctcctgcg cgacatcgag aagatcgacg
     1321 atcacaccgt caggatcacc ttgacacgcc ccgaagcgcc gttcctcgcc aacctggcga
     1381 tgccgttcaa ctcgatcctg tccgccgaat acgccgagtt gctgctgcgc gccggaaatc
     1441 cgcagcagct cgacaccgat ccgatcggca cggggccatt cgttttcgcc ggcttccaga
     1501 aggacgtggc ggtgcgctac cgcgcgttcg ccgattactg gggcggccgc cagccggtcg
     1561 acacgctggt gttctcgatc acggccaatc cgggggtgag gctgaccaag ctgaaggccg
     1621 gcgagtgcca catcatggct tttccggacc cagc
//
LOCUS       DATAIQ010001156         1668 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_174377, whole genome shotgun sequence.
ACCESSION   DATAIQ010001156 DATAIQ010000000
VERSION     DATAIQ010001156.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1668)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1668)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1668
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_174377"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(49..1266)
                     /locus_tag="VHN20_19080"
     CDS             complement(49..1266)
                     /locus_tag="VHN20_19080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018045204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter permease"
                     /protein_id="HEX2727932.1"
                     /translation="MARAPSPPIDPAADAAALLRRLGFATLMLVLPVAALVARRGSVV
                     LVPIGLVLIILAAALDGRHRGLRDTLLRVAASPAGLAGGLLLGWCALSLLWTPFFGAA
                     SERVLGMIGIAALVVASYLALPERTRAANLYILPVGIGLAAVLAIGLALLTDGRYRDE
                     LERGLIVLVLLLWPAVAWLHSRRHDWEGLGLAALVTIAAVIGPKPLPLTALAAGALIY
                     GITALAPTLGVRATAATLAGSVLLAPLIPLIARPIGVELWGRENPYVASLSVWRRIIL
                     DEPGRFITGHGFETAFRGRFVGLLPPNAPSTLLFEIWYDLGIIGAASAAVALYFAVTR
                     AGRQQPTLVPAAVAAFASAFAVACLGIGTAQMWWFTAVAALVLIFVATERGQFRTTRP
                     KASLTLRRPANDA"
     gene            complement(1404..>1668)
                     /locus_tag="VHN20_19085"
     CDS             complement(1404..>1668)
                     /locus_tag="VHN20_19085"
                     /inference="COORDINATES: protein motif:HMM:NF013970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PIN domain-containing protein"
                     /protein_id="HEX2727933.1"
                     /translation="LVSKGWVTLSMTPEIWFEAMLALPGMKLAPMPPRTLIASAFLPG
                     VPPNDPADRIILATARAENLVVVTRDRKLLSYADAGHVRALEC"
BASE COUNT          315 a          534 c          620 g          199 t
ORIGIN      
        1 caagatgaaa tacgtcggcg cccgccgtca ctgacggaac gacgcgcttt aggcgtcgtt
       61 cgccgggcgg cgcagggtca ggctcgcctt gggccgcgtc gtgcggaatt gcccgcgttc
      121 ggtcgcgacg aaaatcagga cgagggccgc gacggcggta aaccaccaca tctgtgccgt
      181 gccgatgccg aggcaggcga ccgcgaacgc gctcgcgaag gcggcgacgg ccgcgggcac
      241 cagggtcggt tgctgccggc cggcgcgcgt caccgcgaaa tacaaggcga ccgcggcaga
      301 cgcggcgccg atgatgccga gatcgtacca gatctcgaac agcagcgtgc tcggggcgtt
      361 cggcggcagc agcccgacga agcggccacg gaacgcggtc tcgaagccgt gccccgtgat
      421 gaaccggccg ggctcgtcga ggatgatgcg tcgccatacg ctgaggctgg cgacgtaagg
      481 attctcgcgg ccccacaact cgacgccgat ggggcgggcg atcagcggaa tcagcggcgc
      541 tagcagcacc gaacccgcca gggtggccgc ggtggcgcgc acgccgagcg tcggggccag
      601 ggccgtgatg ccgtagatca gcgcgccggc cgccagggcg gtgaggggca ggggcttggg
      661 accgatgacg gctgcgatgg tgacgagggc ggcgaggccg agaccttccc aatcgtgccg
      721 gcgcgaatgc agccacgcga ccgccggcca gagcagcaga acgaggacga tgaggccgcg
      781 ctcgagttcg tcgcgatagc ggccatcggt cagcagcgcg aggccgatcg ccaggaccgc
      841 ggcgagcccg atgccgactg ggagaatgta aaggttggcc gcgcgcgtgc gctcggggag
      901 ggcgaggtag ctcgcgacga cgagggcggc gatgccgatc atgcccagga cgcgctcgga
      961 agccgccccg aagaacggcg tccacagaag ggacagggcg caccagccga gcaggaggcc
     1021 tcccgccagc ccggccgggc tggcggcaac gcgcagcagg gtatcgcgca gcccgcgatg
     1081 gcggccgtcg agggccgccg cgaggatgat gaggacgagg ccgatcggca cgagcaccac
     1141 gctgccccgg cgcgccacga gcgctgcgac cggaagcacc agcatcaacg tggcgaagcc
     1201 caggcgcctg agcagcgcgg ccgcatccgc ggcgggatca ataggcgggg agggcgcgcg
     1261 cgccatggtc ggggaaacgt tctcgtggac agggggaggc cggcaacagc cttgccgaac
     1321 ccttagggga gggcagggct tgatgctgta gggccggtgc aacacccatt gaacagatca
     1381 cctgcaatcc tcagcgattt gcatcaacac tcgagtgcac ggacgtgccc ggcgtcggca
     1441 tatgacaaca gctttcgatc tctcgtaacg acaaccaggt tctcggcccg agcggtcgcg
     1501 agaatgatgc ggtccgccgg atcattagga ggaacgcccg gcaagaaggc tgacgctatc
     1561 aaggtgcgcg gcggcatggg cgcaagcttc atccccggca gagctagcat cgcctcgaac
     1621 cagatctcgg gtgtcatgct cagcgtgacc caccctttgc taacgagg
//
LOCUS       DATAIQ010001157         2909 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_174463, whole genome shotgun sequence.
ACCESSION   DATAIQ010001157 DATAIQ010000000
VERSION     DATAIQ010001157.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2909)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2909)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2909
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_174463"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1134)
                     /locus_tag="VHN20_19090"
     CDS             complement(<1..1134)
                     /locus_tag="VHN20_19090"
                     /inference="COORDINATES: protein motif:HMM:NF024792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein TadG-related protein"
                     /protein_id="HEX2727934.1"
                     /translation="MGGGWITKNYFRGFAFPKTRANTFNRSPVKGLPCFGVGEMATLR
                     EGRERSSARLRIGRLARQFRREASGTVAVMFGVLLVPMMFVLGAALDFSRSSDDHATL
                     QRAVDAAVIAAAREHVPDNERVVVAEQVFTGAIPPALLKSVKSKSFTMDAAHSRVVAR
                     VMAETSATLISFGGFHDVSIGVEAEGRIAKPQVRQLDLAMCIDASGSMQALLDAVKSN
                     ALNFEASLNAELKKRGIDPFDAMRVRVIYFRDYGGNNYFDPAAGGNVWQQNGWVYVTP
                     TDPNRYTYLGDLPPLRASQFWNLPTDRSLFSSFVQTELSWGGGDEPESGLECVNEAMD
                     SKWAKVGDLTSSGKKLTHVYPVVAVWTDANAHPPSHPLSLSNTS"
     gene            1270..1524
                     /locus_tag="VHN20_19095"
     CDS             1270..1524
                     /locus_tag="VHN20_19095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727935.1"
                     /translation="MSKSLVTLIAAALLSSTGAFAQTVCEQCGPLPPPPAPVTCSGKS
                     NAGVGNGGDGARTELNDCDPGKSGLHNQAAKNADRPQSRR"
     gene            complement(2312..2803)
                     /locus_tag="VHN20_19100"
     CDS             complement(2312..2803)
                     /locus_tag="VHN20_19100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009026414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HEX2727936.1"
                     /translation="MAKEKTLNDLFLEVMKDMYHAEKQILRALPRMAKAAESKELRGA
                     FETHRDETEVQVERLEQVFEIIGKPARAKTCHAIQGIIEEGKEVMSDFAKTDALDAGL
                     IAAAQAVEHYEISRYGTLRTWANQLGMKDAARLFEQTLEEEKKTDGLLTELAEAAANP
                     KAA"
BASE COUNT          514 a          941 c          897 g          557 t
ORIGIN      
        1 gctcgtgttg gacaggctca aagggtggga cggcggatgc gcgttggcat ccgtccacac
       61 agcgaccacc gggtagacgt gggtcagctt cttgccggat gacgtgaggt cgccaacctt
      121 ggcccatttc gagtccattg cctcgttcac gcattcgagg cccgattcag gctcgtcgcc
      181 tccgccccag gagagctccg tctggacaaa gctcgagaac aggctgcgat cggtcggcag
      241 gttccagaac tgcgaggccc gcagcggcgg aagatcgccg aggtaggtgt agcggttcgg
      301 atcggtgggc gtcacataga cccagccgtt ctgctgccac acgttgccgc ccgccgccgg
      361 gtcgaaataa ttgttgcccc catagtcgcg gaagtagatg acgcggaccc gcatcgcatc
      421 gaacgggtcg atgccgcgct tcttgagctc ggcgttgagg ctggcttcaa agttgagggc
      481 gttgctctta accgcatcga gcagcgcctg catggagcct gatgcgtcga tgcacatcgc
      541 gagatcgagc tgacgcacct ggggcttggc gatcctgcct tccgcctcga cgccgatcga
      601 tacgtcgtgg aatccgccaa aactgattag agtggcggag gtctcggcca tgaccctggc
      661 gacgacgcgc gagtgcgcgg cgtccatcgt gaaactcttc gatttgacgc ttttgagcag
      721 cgcggggggg atggcgcccg tgaagacctg ctccgcgaca acgacccgct cattgtcggg
      781 cacgtgctcc cgcgcggccg cgatgaccgc cgcgtctact gcgcgctgca gcgtcgcgtg
      841 gtcatccgag ctgcgcgaga agtccaacgc agcgccgaga acgaacatca tcggcaccag
      901 cagaacgccg aacatcaccg cgaccgtgcc ggaggcctcg cgccggaatt gccgcgccag
      961 ccgtccgatc ctcaagcgtg cagatgagcg ctcacggcct tcgcgaagcg tcgccatctc
     1021 tcctactcca aaacacggca atccttttac gggagacctg ttaaatgtgt ttgcgcgggt
     1081 tttcggaaat gcgaaccctc ggaagtaatt ttttgttatc cagccgcctc ccatgttttg
     1141 gcccgctcaa atacttactc atatattact ttgtaattgc tgacatattt taataataat
     1201 acgacacaga ttggcttgaa ctcacccgat taccgggaga catttcgttg ccaatagatg
     1261 aggaaccaca tgagtaagtc acttgtcacg cttattgccg cggcgctcct gtcgagcacc
     1321 ggcgcgtttg cgcagaccgt gtgcgagcag tgcggaccac tgccgccgcc tccggcgccc
     1381 gtcacctgca gcggcaaatc gaatgctggc gtgggcaacg gcggcgacgg cgcccggacg
     1441 gaactgaacg attgcgaccc gggcaagtca ggcctgcaca accaggccgc caagaacgcg
     1501 gacaggccgc agagccggcg ctaagcgaca cgacctgtca cgacgtgccc cgggcgatgc
     1561 gtcccggggc acgtgcgcga accatgccgc gatcgcttac gatccattga gcagcgatgg
     1621 gccgatgttg aggcgtcgcc gatgcgcgcc tgcgcgccga ccgcctgccc catcccgctc
     1681 tgcaagccca gcatcgccgg cgagcctcga tcgatggcgc gcggtacatt ataattaggt
     1741 cttctcacgg gcgcctcgtg cacggccgca tcgttccgat gtcaatgacg tcgcgcgcga
     1801 ctacgccggt ccgccttcat tcatccatgt ggccggccca tccggcccgg cctcgcgcgc
     1861 gagcacgcaa cgccattccc gctcggcacg tcgctgcccc tcgcggtcgg ccaatcacaa
     1921 ttcgttcgaa cattgggtgc cgatacggat gacgagacgc gcggctctgc ggccgatggg
     1981 ggatcatgcg cgtcggggga cggacgagga cgaccatcgt cgccgacaga cgctcgcaac
     2041 aagcgccaca tcacgtcgag aaaaccgact cgcgtgggtc cgacggcgac gctttcccgg
     2101 catccagtgc gcgctgatta gcgcggatga cttcaccagt tccgaggccg agtggccggc
     2161 caacgagctc tcgctcgcgg cagctacctc gtcatgtcga cacgcgacgc atcgtttatg
     2221 gcgagcctgg tgctgcgccg gcgctgcggt cgtgcgccgc ggcgtccggc gcgcgttgca
     2281 agctttttag cgttaccgat cctggtcgtg atcaggcggc tttcgggttg gcggcggctt
     2341 cggcaagctc ggtgagcagc ccgtcggtct tcttctcttc ctcaagcgtc tgctcgaaga
     2401 gccgagccgc atccttcatg ccgagttgat tggcccaggt tcgcagcgtg ccgtaacgcg
     2461 agatctcgta atgctcgacc gcctgtgcgg ccgcgatcag gccggcgtcg agcgcatcag
     2521 tcttggcaaa gtccgacatc acctccttac cttcctcgat gatgccctga atggcgtggc
     2581 aggttttggc gcgagcgggc ttgccgatga tctcgaacac ctgctcgagg cgctctacct
     2641 ggacctcggt ttcatcacgg tgggtctcga acgcgccgcg aagctccttc gactccgctg
     2701 ccttcgccat ccgcggcagg gcgcgaagga tctgcttctc ggcgtggtac atgtccttca
     2761 tcacttcgag aaagaggtcg ttgagggtct tctctttagc catggcggga ttctccggtg
     2821 gtggcagcaa actcaaccgg gcgcggccgg tcttggttcc tgaccaaccc gagatcgcaa
     2881 gccgatcagc cgggccgcga cgacttgca
//
LOCUS       DATAIQ010001158         6394 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_174895, whole genome shotgun sequence.
ACCESSION   DATAIQ010001158 DATAIQ010000000
VERSION     DATAIQ010001158.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 6394)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6394)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6394
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_174895"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1478
                     /locus_tag="VHN20_19105"
     CDS             <1..1478
                     /locus_tag="VHN20_19105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727937.1"
                     /translation="DGDPAADRAGLKALIAERTAAEVGLDGLGRLTTAVQAPVAPATS
                     PYTLQVTGNAPALPFGFEPVSTASSSAVISGGAAGGSPPQISLTVSGVPADNDTVNVV
                     VRDKDGVTHSIQLIAKTTVSPGQRDVFQIGVDENATMNGPNGLRAAVEAALRDKATAV
                     LKPRAALLAAQQFFDGSASNAPDRVAAPASLLTVSNPAADTVQLTGDATTTFGFEILG
                     TTTDTGANITTTFTPAVVAPPTPENAQFQLTGVPADGDTIVVQLQDRTGAPHTVTLTA
                     RTSPTSNPNEFQIGADVASTIGGANGLNAALGRAITAKATEVLMGEATAIDTSGTRQT
                     LIWYKGDDASTPLARDTAPLRIDTSHVVGTGARANEPAIRSMLVQFSVLAEATFTNTD
                     AERERHNNLTLRVRDNLSPPPGLQRLEDIATDFGTIVATLEGAKERHAIAENLLQDTL
                     DKVESASVEETGAAILTLQTRLQASYQTTSMLSRLSLVNFL"
     gene            complement(1600..2145)
                     /locus_tag="VHN20_19110"
     CDS             complement(1600..2145)
                     /locus_tag="VHN20_19110"
                     /EC_number="3.1.1.106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-acetyl-ADP-ribose deacetylase"
                     /protein_id="HEX2727938.1"
                     /translation="MTEPAASAAFRGVTLSVVTGDITTLAVDAIVNAANTSLLGGGGV
                     DGALHRAAGPELLAECRTLKGCATGEAKITRGYRLPARHVIHTVGPVWEGGGAGEADL
                     LASCYRRSLEVAAAYGLRSIAFPAISTGVYGFPPELAAPIAVRTVHDNLGLGDFETVI
                     FCCFGAPSARLHVSALAELSL"
     gene            2299..3192
                     /gene="glxR"
                     /locus_tag="VHN20_19115"
     CDS             2299..3192
                     /gene="glxR"
                     /locus_tag="VHN20_19115"
                     /EC_number="1.1.1.60"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015929699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008679 - 2-hydroxy-3-oxopropionate
                     reductase activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0046487 - glyoxylate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxy-3-oxopropionate reductase"
                     /protein_id="HEX2727939.1"
                     /translation="MKVGFIGLGIMGRPMAGHVLKGGHELFAHSRRGVPPDLVSEGAI
                     ACGAPREVAERAEIVITMVPDTPDVEKVLFEPNGVAEGLAAGKIVVDMSSISPLATKD
                     FAARVNARGCDYLDAPVSGGEVGAKAASLTIMVGGPQPAFDKVKPLFELMGKNITLVG
                     GNGDGQTTKVANQIIVALTIEAVGEALLFASKAGADPAKVRQALMGGFASSRILEVHG
                     ERMIKRSFDPGFRIMLHQKDLNLALQGARELKVSLPNTATCQELFSACAANGGSAWDH
                     SAMVRALEMLANHEIAARKAG"
     gene            complement(3266..3961)
                     /locus_tag="VHN20_19120"
     CDS             complement(3266..3961)
                     /locus_tag="VHN20_19120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007068552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HEX2727940.1"
                     /translation="MMSKRVLACALLWSALVTISQAAAQMPPSEVELKSYGGLHAAAA
                     RGSVDDIRHLAAAGHVLDARDRNERTPLHVAAFQGHEAAARALLAVGADPNLLDRQRY
                     DAVTVAAVRDDVRTVNALLSGGASARLITSPYHGTALIAASHLGHHDVVVELIKAGAP
                     LDHLNNLGWTALMEAVALGDGGPRHVATVRALLDGGADRDVPDRQALTPLHHAKARGY
                     VDIVALLERSPAR"
     gene            complement(3976..4788)
                     /locus_tag="VHN20_19125"
     CDS             complement(3976..4788)
                     /locus_tag="VHN20_19125"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX2727941.1"
                     /translation="MNRLGKVADYYAAKSLSVRFYDALTARDRNLRGDLAFYAARVGP
                     APQRVLELGCGTGRVALALAARGHQVVGVDISEPMLRIAQAKRKRLPAAQGRNVQFVL
                     HDMLTLALPLRFHAVIAPYYAFNHLEGRLRRAQAVATMARHLTPGGTAIIHAASPEAL
                     HDKGEAQGPGAVIKAETTRARLEVTWSEPLLDEPQHRTTRLVDYQVYGADGSLAETSR
                     ERLTYYWFADDEVERAARKVGLDCVQRLASFEGEGGRERIYILKKPQADGAS"
     gene            complement(5039..5797)
                     /gene="flgH"
                     /locus_tag="VHN20_19130"
     CDS             complement(5039..5797)
                     /gene="flgH"
                     /locus_tag="VHN20_19130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020093631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009427 - bacterial-type flagellum basal
                     body, distal rod, L ring [Evidence IEA];
                     GO_function: GO:0003774 - cytoskeletal motor activity
                     [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body L-ring protein FlgH"
                     /protein_id="HEX2727942.1"
                     /translation="MTVRSLSHLPLLGMIAAGFALGGCSVADRLATVGQPPVLSAIED
                     PTAKAGYKPVRMPMPEPQPIAFAPNSLWRQGSRAFFKDQRAQQVGDLVTVRVKVTDQA
                     QINNSTSRSRKNEEGFGAEALFGAETQIAKILPEGTRADALVDLDSNSSSQGSGSIRR
                     SEQLVTNVAAVVTQVLPNGNLVVEGKQEIRVNFEVRELIVAGVVRPEDIEADNTIDSA
                     KIAQARIAYGGRGQITDVQQPRYGQQVMDILLPF"
     gene            complement(5824..>6394)
                     /gene="flgA"
                     /locus_tag="VHN20_19135"
     CDS             complement(5824..>6394)
                     /gene="flgA"
                     /locus_tag="VHN20_19135"
                     /inference="COORDINATES: protein motif:HMM:TIGR03170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009428 - bacterial-type flagellum basal
                     body, distal rod, P ring [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="flagellar basal body P-ring formation chaperone
                     FlgA"
                     /protein_id="HEX2727943.1"
                     /translation="LVVAPDVTNQVTVEDVSYDRRSRRVSALVWIGPSATERKAAMRV
                     TGAIVEQVEVAILTRALNRGESAQAGDFVIEKRARENVPSDAQGDVQGLAGRVARRAL
                     AAGAMVRVADLARPEIVTRGDIVTIVYEVPGMTLSLRGRASESGAQGDTINVVNPQSK
                     KTLQGQIVAPGRVSVSAALPGRIAAATQP"
BASE COUNT         1043 a         2172 c         2182 g          997 t
ORIGIN      
        1 tggacggtga ccccgccgcc gatcgggccg ggctcaaggc gttgatcgcc gagcgcaccg
       61 ccgcggaagt cggactcgat ggcctcgggc gcctgaccac ggccgtccag gccccggtcg
      121 cgccggccac gagcccgtat acgctgcagg tgaccggaaa cgccccggcc ctcccgttcg
      181 ggttcgagcc cgtgtcgacg gcgtcgagca gcgccgtcat ttcgggaggg gctgcgggtg
      241 gttcgccccc gcagatcagt ctgacggtca gcggcgttcc cgccgacaac gacacggtca
      301 acgtggtggt gcgcgacaag gacggcgtca cccactcgat ccagctgatc gccaagacca
      361 cggtcagccc cggtcagcgc gacgtgttcc agatcggcgt cgatgagaac gcgaccatga
      421 acgggcccaa cgggctgcgc gctgctgtcg aggccgcgct gcgcgacaag gcgaccgcgg
      481 tcctcaagcc gcgcgccgcc cttctggccg cacagcaatt cttcgacggc tcggcgtcga
      541 atgcgcccga tcgcgtcgcc gccccggcgt cgctcctgac cgtttcgaac ccggccgccg
      601 acacggtgca gctgaccggc gacgcaacca cgacgtttgg cttcgagatc ctgggaacga
      661 ccacggacac gggcgccaac atcacgacca ccttcacgcc ggcggtggtc gctcccccga
      721 cgccggaaaa tgcgcagttc cagctcaccg gtgttccggc cgacggcgac acgatcgtcg
      781 tgcaacttca ggacaggacg ggagcgccgc atacggtgac gctgacggcg cgcacgtcgc
      841 cgaccagcaa tcccaatgag ttccagatcg gggccgatgt cgcgtcgacc atcggcggcg
      901 ccaacggcct caacgccgcc ctcggccgcg cgatcaccgc caaggccacc gaggtcctga
      961 tgggcgaggc gacggccatc gatacgtccg gaacgcggca gaccttgatc tggtacaagg
     1021 gcgacgacgc ctcgacgccg ctcgcccggg acacggcgcc cctgcgcatc gacacctcgc
     1081 acgtggtcgg aaccggtgcg cgcgccaacg agccggcgat ccgctcgatg ctcgtgcagt
     1141 tcagcgtgct cgccgaggcg accttcacga acaccgacgc cgagagggag cgccacaaca
     1201 acctgacgct gcgcgtgcgc gacaaccttt cgcctcctcc gggcctgcag cggctcgagg
     1261 acatcgccac cgatttcggt accatcgtgg cgacgctgga gggcgccaag gagcgccacg
     1321 cgatcgccga gaacctgctc caggacacgc tcgacaaggt cgagtcggcg agcgttgagg
     1381 aaacaggcgc cgccattctg acgctgcaga cgcgtctcca ggcgagctat cagaccacct
     1441 cgatgctgtc gcgtctctcg ctcgtgaact tcctgtagtc ggatcgttcg tcgcggcgtt
     1501 gttggtggcg ccatcgcggg gggatcgtcg gcggtggcct cctggcggct tgcgatgcga
     1561 aagtccgagc aaaaccgcgc gagcggcaca ggccttggat cacaggctca gttcggcaag
     1621 cgcgctgacg tgaaggcgcg cgctcggtgc gccgaagcag cagaagatca ccgtttcgaa
     1681 atcgcccagg ccgagattgt cgtgcaccgt gcggaccgcg atcggcgctg ccagctccgg
     1741 tggaaaccca taaacgccgg tcgagatcgc cggaaaggcg atgctgcgta atccatatgc
     1801 cgccgcaacc tcgagcgagc gccggtagca gctggcgagc aggtccgcct cacccgcacc
     1861 cccgccctcc cagacgggcc cgaccgtgtg gatcacatgc cgggccggca accggtagcc
     1921 gcgagtgatc ttggcctcgc cggtcgcgca gcccttcaaa gtccggcatt cggcaagcag
     1981 ctcagggccc gcggcgcggt ggagggcgcc gtcgaccccg ccgccgccaa gcagcgaggt
     2041 gttggcggcg ttgacgatcg cgtcgacggc gagggttgtg atgtcgcctg tcacgacgct
     2101 cagcgtcacg cctcggaaag cggctgatgc ggccggctcg gtcatgggac gcgatcctcc
     2161 gcggcttgac gcaaggatgc aagatcgtga tcgtcgtggc ggccgccgtc gctgctaagc
     2221 gtcatctcgg ctgcgttcga tccgggccat gcggcgtcgc ctttggcgcc agacccgata
     2281 gtgcggggag gtagcggcat gaaagtggga ttcattggtc tcggcatcat gggccggccg
     2341 atggccgggc atgtcctgaa gggcggccat gagctcttcg cgcatagccg ccgcggcgtg
     2401 ccgcccgatc tggtctcgga gggagcgatc gcctgcggcg cgccgcgcga ggtcgccgag
     2461 cgggccgaga tcgtcatcac gatggtgccg gacaccccgg acgtggagaa ggtcctgttc
     2521 gagccgaacg gcgtggcgga ggggctggcg gcgggcaaga tcgtcgtcga catgagctcg
     2581 atctcccccc ttgccaccaa ggactttgcc gcgcgcgtca atgcccgggg ctgcgactat
     2641 ctcgatgcgc cggtctccgg tggcgaggtc ggcgccaagg cggcgagcct cacaatcatg
     2701 gtgggcggcc cgcagcccgc gttcgacaag gtcaagccgc tgttcgagct catgggcaag
     2761 aacatcacgc tcgtcggcgg caacggcgac ggccagacca ccaaggtcgc caatcagatc
     2821 atcgtcgccc tgaccatcga agccgtcggt gaagcgctcc tgttcgcgtc caaggccggt
     2881 gccgacccgg ccaaagttcg tcaggcgctc atgggtggct tcgcttcctc gcgcatcctc
     2941 gaggtgcacg gcgaacgcat gatcaaacgc agcttcgatc ccggctttcg catcatgctg
     3001 caccagaagg atctcaatct ggcgctgcag ggcgccaggg agctcaaggt cagcctgccc
     3061 aacacggcga cgtgccagga gctgttcagc gcctgcgccg ccaatggcgg ttcggcctgg
     3121 gatcattcgg cgatggtgcg cgccctcgag atgctcgcga accacgagat cgcggcgcgg
     3181 aaggcgggct agctcgctgc ctggagcaac gatccggcga agtggctgtc gcttcgccga
     3241 ataaggcgct cccgccgtga gggcgtcatc gcgccgggct gcgctcgagc agggcgacga
     3301 tatccacata gccgcgtgcc tttgcgtggt gcagcggcgt aagcgcctgt cgatccggga
     3361 cgtcgcgatc cgcgcccccg tcgagcaatg cccgcacggt tgcaacgtgg cgcggcccgc
     3421 catctccgag cgcgacagcc tccatgagtg ccgtccatcc gagattgttc aaatggtcca
     3481 gcggagcgcc cgccttgatc agctccacga cgacgtcatg gtgcccgaga tgagacgccg
     3541 caatcagcgc ggttccatga taagggctgg tgatcagcct ggcgctagcg ccgccggaga
     3601 gaagagcgtt gacggtccgg acatcgtcgc gaaccgccgc gaccgtcacc gcgtcgtaac
     3661 gctgcctgtc caggaggttc ggatctgcgc ccacggcgag cagggcccgg gcggccgcct
     3721 catgtccttg gaacgcggca acatgcaggg gcgtgcgctc attgcggtcg cgcgcgtcaa
     3781 gaacatggcc tgcggcagca aggtggcgga tgtcgtccac gctaccgcgg gccgctgctg
     3841 cgtgaaggcc gccataggac ttgagctcca cctcgctcgg aggcatttgc gccgctgcct
     3901 ggctgatcgt gacaagcgcc gaccaaagta aggcgcacgc caagacgcgt ttggacatca
     3961 ttgctctcca tcaagtcacg aagccccgtc cgcttgcggc ttcttgagga tgtagatccg
     4021 ttcgcgcccg ccttcgccct cgaacgaggc cagtcgttgc acgcaatcga ggccgacctt
     4081 gcgcgccgcg cgctccacct cgtcgtcggc gaaccagtaa taggtcaggc gctcgcgcga
     4141 ggtctcggcc agcgagccgt cggccccgta gacctggtaa tccacgagac gggtggtcct
     4201 gtgctgcggc tcgtcgagca gcggctcgct ccacgtcacc tcgaggcgcg cacgggtggt
     4261 ttcggccttg atgacggcgc ctggtccctg cgcctcgccc ttgtcgtgca gcgcctcggg
     4321 cgaggcggca tgaatgatag ccgtgccgcc gggtgtaaga tgccgggcca tggtggcgac
     4381 ggcctgcgcg cgccgcaagc gcccctcgag atgattgaat gcgtaatacg gggcgatcac
     4441 ggcgtgaaag cgcagcggca gcgccagggt cagcatgtcg tgcaggacga actgcacgtt
     4501 gcgcccttga gctgccggca ggcgcttgcg cttcgcctga gcaatccgga gcatcggctc
     4561 ggagatgtcg acgccgacca cctggtgccc gcgcgccgcc agcgccagcg ccacgcgccc
     4621 ggtgccgcaa ccgagctcga ggacgcgttg cggcgccggc ccgacccggg cggcgtagaa
     4681 tgcaaggtcg ccgcgcaggt tgcggtcgcg cgccgtgagg gcgtcgtaga agcgcacgct
     4741 caggcttttc gccgcgtagt aatccgcaac cttcccgagc cggttcatgc ccaaggctcc
     4801 acgcaggcaa gcgcttcatc acaatagagc atgatcgggc gaagtggggg atcatatcac
     4861 ttcgctggtt ggcgtggcgc ggagctcgat cgggatcatg ccgcgcaaag aggaacggct
     4921 ccggcggggg gcgccggagc cgtgtcgagg cggcggcaaa cggggagcgc cggcgcctgt
     4981 cgaggcggct gcaaggggga gcgccgtcgc ctcaagggat tgaaacgtag tctctgggct
     5041 agaagggcag caggatatcc atcacttgct ggccataacg cggctgctgc acgtccgtga
     5101 tctgaccgcg gccgccatag gcgatgcgcg cctgggctat cttcgccgag tcgatggtgt
     5161 tgtcggcctc gatgtcctcg ggccgcacga cgccggcgac gatcagctcc cgcacctcga
     5221 aattgacccg gatttcctgc ttgccttcga ccaccagatt accgttgggc aggacctgcg
     5281 tgaccacggc cgcgacattg gtgacgagct gctcggaacg cctgatcgag ccggagccct
     5341 ggctggagga attcgaatcg aggtcgacca gcgcgtcggc ccgcgtgccc tcgggcagga
     5401 ttttggcgat ctgcgtctcg gccccgaaca gagcctctgc gccaaaccct tcctcgttct
     5461 tgcgcgagcg actggtcgag ttgttgatct gcgcctggtc ggtcaccttg acgcggaccg
     5521 tgacgaggtc gccgacctgt tgcgcgcgct ggtccttgaa gaaggcgcgc gagccctgcc
     5581 gccacagtga gttcggagcg aaggcaatcg gctggggctc cggcatgggc atgcgcacag
     5641 gcttgtagcc ggcttttgcc gtgggatcct cgatcgccga caagaccggc ggctgcccca
     5701 cggtggcgag gcggtcggcc acgctgcacc cgccgagcgc gaagcctgcc gcgatcatgc
     5761 cgagcagcgg gagatgagag agcgagcgaa ccgtcatggt gatgctttcg taggagcggc
     5821 gggtcacggc tgcgtcgccg cggcgatgcg accgggcagc gccgcgctga cggacacccg
     5881 gccaggggcc acgatctggc cctgcaaggt cttcttcgac tgcggattga cgacattgat
     5941 cgtgtcgcct tgcgcaccgc tttccgaggc gcggccgcgc aggctcagcg tcatgcccgg
     6001 aacctcgtag acgatggtga cgatgtcgcc gcgggtcacg atctcgggac gggcaaggtc
     6061 ggcgacccgt accatggcgc cggcggcgag cgcacggcgc gccacgcgcc cggccagccc
     6121 ctgaacgtcg ccctgtgcgt ccgacggaac gttctccctg gcgcgcttct caataacgaa
     6181 gtcaccggcc tgcgccgact cgccgcgatt cagcgcgcgc gtcaggatgg cgacctcgac
     6241 ctgctccaca atggcgccgg tcacgcgcat ggccgccttg cgttccgtgg cgctcgggcc
     6301 gatccacacc agcgccgata cccggcggct gcgtcgatcg tacgacacgt cctcgaccgt
     6361 gacctggttg gtgacgtcgg gcgcgaccac gagg
//
LOCUS       DATAIQ010001159         3453 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_83207, whole genome shotgun sequence.
ACCESSION   DATAIQ010001159 DATAIQ010000000
VERSION     DATAIQ010001159.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3453)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3453)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3453
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_83207"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..889
                     /gene="groEL"
                     /locus_tag="VHN20_19140"
     CDS             <1..889
                     /gene="groEL"
                     /locus_tag="VHN20_19140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HEX2727944.1"
                     /translation="IAEDIEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIA
                     VLTAGQTISEDLGIKLENVTLDMLGRAKRVRIEKENTTIIDGAGKKKDIEARVGQIKA
                     QIEETTSDYDREKLQERLAKLAGGIAVIRVGGATEVEVKEKKDRVDDALNATRAAVEE
                     GIVPGGGVALLRAKAAAQKLKNENPDVQAGINIVLKALESPIRQIAENSGVEGSIVVG
                     KVSENKSPTFGFNAQAEEYVDMIQAGIVDPAKVVRTALQDAASVAGLLVTTEAMVAEL
                     PKKDTPPMPGGGGMGGMDF"
     gene            995..1417
                     /locus_tag="VHN20_19145"
     CDS             995..1417
                     /locus_tag="VHN20_19145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="group III truncated hemoglobin"
                     /protein_id="HEX2727945.1"
                     /translation="MSFVAAGSGEGRYQRRAIDAGVTEPMVQNLIAAFYEKVKRDPML
                     GPVFDAIIGHEWDAHIEKITSFWLFVTGLGKGYRTRDFMPAHVRHPTIRASLLPRWLD
                     LFRETASDICPPAAARVLIEIAEGMADSIGISLERRDG"
     gene            1594..3078
                     /locus_tag="VHN20_19150"
     CDS             1594..3078
                     /locus_tag="VHN20_19150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727946.1"
                     /translation="MTAIALRARGRSVRAALVAAGFCVAAGSASADYLPPNMVAYEDL
                     VAATKEVMSRPGVPTKGAEGFVEDVFRINAVGMDWDIGVAVYEPSDPARVAVGADGKK
                     IGIFLLHGGSGDFKSMHPQASVLSQKFGYKVVTMTFPGRHYLQDASREWPGHTVEKDG
                     SVRTPIWVKDELITRDQYDVVEDRTKRPRYGTRRLAQAKPGTLFYYRMAGWPIAFEEG
                     GKEAMRRHFALAEYSIYVHGHSTGGPFVNMLSQRVPNVAGVLAIENSPFGYINRAKHA
                     WSGELGKIKGYQLVESAKQLPSRADPFEELYIRSWRDSARYVGPELLGKEGPQALMRL
                     PMVMEDILDGWDKAQKRPQFKAEYLVTHAIDGSLEKAARVTAERLKLGEADTQALVAR
                     YVGLTRELEGPGVKPVPANLFMISAHSRDHSREVYEEVIMPLYRKMNPAPKVALVQFD
                     AGKHGYMSGEDDEGLDLGIGPAVFKVWDEAIKGGWFGNGVANGQ"
     gene            3133..>3453
                     /locus_tag="VHN20_19155"
     CDS             3133..>3453
                     /locus_tag="VHN20_19155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015928942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HEX2727947.1"
                     /translation="MSGSAARFAAMMWAGLGLALAGFPGSVTAQQAASAPVAIDADDI
                     GGVVRGPNGPEAGVWVIAETHDLPTRFARSVVTDDQGRYVVPDLPKATYDLWVRGYGL
                     IDSAK"
BASE COUNT          634 a         1096 c         1196 g          527 t
ORIGIN      
        1 catcgccgag gacatcgagg gcgaggcgct tgccaccctc gtggtcaaca agctgcgcgg
       61 cggcctcaag gttgcggccg tgaaggctcc gggcttcggc gaccgccgca aggccatgct
      121 cgaggacatc gccgtcctca ccgccggcca gacgatctcg gaagacctcg gcatcaagct
      181 cgagaacgtg acgctcgaca tgctcggccg cgccaagcgc gtgcggatcg agaaggagaa
      241 caccacgatc atcgacggcg ccggcaagaa gaaggacatc gaggcccgcg tcggacagat
      301 caaggcgcag atcgaggaga ccacctcgga ctacgaccgt gagaagctcc aggagcgtct
      361 cgccaagctg gcgggcggca tcgcggtgat ccgcgtcggc ggcgccaccg aggtcgaggt
      421 gaaggagaag aaggaccgcg ttgacgacgc cctcaacgcc acccgcgcgg cggtcgagga
      481 aggcatcgtg ccgggcggcg gcgtcgcgct gctgcgcgcc aaggccgcgg cccagaagct
      541 gaagaacgag aaccccgacg tccaggccgg catcaacatc gtgctcaagg cgctcgagag
      601 cccgatccgc cagatcgccg aaaattccgg cgtcgagggc tcgatcgtgg tcggcaaggt
      661 cagcgagaac aagtcgccga ccttcggctt caatgcgcag gccgaggaat atgtcgacat
      721 gatccaggcg ggcatcgtcg atccggccaa ggtcgtgcgc acggcgctcc aggacgcggc
      781 gtccgtggcg ggcctgctcg tcacgaccga ggccatggtc gccgagctgc cgaagaagga
      841 tacgcccccg atgccgggcg gcggcggcat gggcggaatg gacttctaag gaagtccatt
      901 cgctcaggaa gaatgataag ggccgccgcg aggcggccct tttcttttgt ctttcgttct
      961 atcgttgggc gtagacatcg aggtacgaag attcatgagc tttgtcgccg ctggatctgg
     1021 tgagggccgc tatcagcggc gtgccatcga cgcgggcgtc accgagccga tggtccagaa
     1081 cctgatcgcc gccttctacg aaaaggtgaa gcgcgatccg atgctgggcc cggtcttcga
     1141 cgcgatcatc ggccacgagt gggacgcgca tatcgaaaag atcacgtcct tctggctgtt
     1201 cgtgacgggc ctcggcaagg gctaccggac acgcgacttc atgccggccc acgtccggca
     1261 cccgaccatc cgcgcatcgc tgctgccacg atggctcgat ctttttcgcg agaccgcaag
     1321 cgacatctgc ccgccggcgg cggcgagggt cctgatcgag atcgccgaag gaatggccga
     1381 ctcgatcggg atcagcctcg agcggcgcga cggctgacat cgctcaatcc aggaagcttg
     1441 cgagcaagca agcggggcgg cgacgcgcat ccgcgggcgc ctgcgtggcg cggcgcggaa
     1501 gcggtggttt gcgccttttt gccgttgact ccgttcggca tctttccgag cctgacctcg
     1561 acccaacaaa agcactgacg ggaggagacg aggatgacgg caattgcatt gagggcgcgt
     1621 ggtcggagcg ttcgagccgc gctcgtcgct gcaggcttct gtgtcgcggc gggctcggcg
     1681 agcgccgatt acctgccgcc aaacatggtg gcgtacgagg acctcgtcgc agccacgaaa
     1741 gaggtgatga gccggcccgg cgtgccgacg aaaggcgccg agggattcgt cgaggacgtg
     1801 ttccggatca acgcggtcgg gatggattgg gacatcggcg tcgcggtcta tgagccgtcc
     1861 gatccggcgc gtgtcgcggt gggcgctgac ggcaagaaga tcggcatctt cctgctgcac
     1921 ggcggctccg gcgacttcaa gtccatgcac ccgcaggcat cggtgctgtc gcagaagttc
     1981 ggctacaagg tcgtcacgat gaccttcccg ggccgtcact atctgcagga cgcgagccgg
     2041 gagtggccgg ggcacacggt cgagaaggac ggctccgtgc gcacgccgat ctgggtcaag
     2101 gacgaactga tcacccgcga tcaatatgat gtcgtcgagg accggacgaa gcggccgcgc
     2161 tacggcacgc gccgcctcgc ccaggccaag cccgggaccc tgttctacta tcgcatggcc
     2221 ggttggccga tcgccttcga ggagggcggc aaggaggcga tgcggcgcca tttcgctctg
     2281 gccgaatact cgatctacgt gcacggccac tccaccggtg ggccattcgt caacatgctg
     2341 tcgcagcggg tgccgaacgt cgccggcgtc cttgcgatcg agaactcccc gttcggctac
     2401 atcaaccgcg ccaagcacgc ctggagcggc gagctcggca agatcaaggg ctaccagctc
     2461 gtcgaaagcg ccaagcagct gccgtcgcgg gccgacccgt tcgaggagct gtatatccgc
     2521 agctggcgcg acagcgcccg ctatgtcggg ccggagcttc tcggcaagga agggccgcag
     2581 gcgctgatgc ggctgcccat ggtcatggaa gatatcctgg acggatggga caaggcgcag
     2641 aagcgtccgc aattcaaggc ggaatacctc gtcacccatg ccatcgacgg ctcgctcgaa
     2701 aaggccgcgc gcgtcaccgc ggagcggctg aagctcggcg aggccgacac gcaggcgctg
     2761 gtcgcacgct atgtcggcct gacccgcgag ctcgaaggcc ccggcgtgaa gcccgttccg
     2821 gcgaacctgt tcatgatctc cgcgcacagc cgcgaccaca gccgcgaggt ctacgaagaa
     2881 gtgatcatgc ccctgtatcg caagatgaat ccggctccta aggtggcgct ggtgcagttc
     2941 gacgccggca agcacggcta catgtcgggc gaggacgacg aggggctcga cctcggcatc
     3001 ggcccggccg tgttcaaggt gtgggacgaa gccatcaagg gtggctggtt cggcaacggc
     3061 gttgcgaacg gccagtgacc ggcaggagac ggtccggcgg tcatagagac gcaactccca
     3121 gggaggtcgg ccatgagcgg cagcgcggct cgtttcgcag cgatgatgtg ggccgggctt
     3181 ggcctggcct tggccgggtt cccgggatcg gtgaccgccc agcaggcggc atcggccccg
     3241 gtcgcgatcg atgcggacga catcggcggc gtcgtgcggg gcccgaacgg ccccgaagcc
     3301 ggcgtgtggg tgatcgcgga aacccacgat cttccgaccc gctttgcgcg tagcgtcgtg
     3361 accgacgacc agggccgcta cgtcgtgccc gacctgccga aggcgaccta tgatctctgg
     3421 gtgcgcggct acgggctcat cgactcggcc aag
//
LOCUS       DATAIQ010001160         2243 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_175216, whole genome shotgun sequence.
ACCESSION   DATAIQ010001160 DATAIQ010000000
VERSION     DATAIQ010001160.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2243)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2243)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2243
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_175216"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..944)
                     /locus_tag="VHN20_19160"
     CDS             complement(<1..944)
                     /locus_tag="VHN20_19160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing sensor histidine kinase"
                     /protein_id="HEX2727948.1"
                     /translation="MVSADAVCEPVRTGTILGIARSIANPTYRRLVHAEPWLRLAVPT
                     LLSIFLLSLAVSAGLQIWQSRNVTLQDASDGIDVIATLAAAKLQQPDLSSRSAAARDL
                     DLLARALPASAFAHGRTLLLADNSGLILAAHPASQPVPQRLSDFQGDIQLLTTYGDRA
                     GVVGLRLGADDAIATLRRLPGGTGQIAVVQPVESLLSGWRTRSYGLVTLVGAVVIVLV
                     GIAAAYFMQAGRARAADEVCEKVRRRVDSALARGRCGLLDWDIARGRMYWSDSMYELL
                     GYERHDEFLSFGQVNAMVHPDDGDLYALADQLASSRTSA"
     gene            complement(1123..>2243)
                     /locus_tag="VHN20_19165"
     CDS             complement(1123..>2243)
                     /locus_tag="VHN20_19165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015821001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF3458 domain-containing protein"
                     /protein_id="HEX2727949.1"
                     /translation="GGQPGPGNGLFVLDRASGAITFDNVASRPVPSVFRGFSAPVKVA
                     LDLADDELLALLRHDSDSFSRWEAAQTVAMRLLVRLARSANAGLEAADSLAAALLAFM
                     KQEAERDPAFAALMLALPSESEIAQEIGAQVDPDAIYRARKRVRGSIGQHLLDRLLDL
                     RGKLASPGPYSPDAASAGRRSLRNVALDLIAAGDRDLGTRLADEQLATATNMTDRLAA
                     LAVLTTIPGDVREQAITRFAERYRDEPLVLDKWLALQAMIPEGDTLERVRGLMGHPSF
                     SITNPNRVRSLVGSFALNNPTQFNRADGAGYAFLADIALTLDKANPQVAARLLTAFGP
                     WKTMEPHRRAQARSALERISRAQNLSPDVGDIVQRSLA"
BASE COUNT          354 a          745 c          823 g          321 t
ORIGIN      
        1 gcggacgtgc gcgacgaggc gagctgatcg gcgagggcgt agagatcacc gtcgtccggg
       61 tggaccatgg cgttgacctg cccgaaggag aggaactcgt catggcgctc gtagccgagc
      121 agctcgtaca tcgagtcgga ccagtacatg cggccgcgcg cgatgtccca gtcgagcagc
      181 ccgcagcgtc cgcgcgcgag cgccgagtcg acgcgccggc gcactttctc gcacacctcg
      241 tccgcggcac gggcgcggcc ggcctgcatg aaataggccg cggcgatgcc gacgagcacg
      301 atcaccaccg ccccgaccag cgtgacgagc ccataggagc gcgtccgcca gcccgacagg
      361 agcgactcca cgggctgcac gacggcgatc tgtcccgtcc ccccgggcaa tcggcgcaga
      421 gtggcgatgg cgtcatcggc gccgagccga aggccgacca cgccggcgcg gtcgccgtag
      481 gtggtgagaa gctggatgtc gccctgaaaa tcgctcagcc gctgcggcac cggctgcgaa
      541 gccgggtgcg ccgccaggat gagccccgaa ttgtccgcaa ggagcagcgt gcggccgtgc
      601 gcgaaggccg aggccggcaa ggcgcgggcc aagaggtcga ggtcgcgcgc cgccgccgac
      661 cgcgacgaca gatcgggctg ctgcagcttc gcggccgcga gcgtcgcgat cacgtcgatg
      721 ccgtcgcttg cgtcctggag cgtgacgttg cggctctgcc agatctgcag gccggcgctc
      781 accgcgaggc tgagcaggaa gatgctcaga agcgtcggta cggcaaggcg cagccagggt
      841 tccgcgtgga caagcctgcg ataggtggga tttgcgatcg accgcgcaat tccaaggatc
      901 gttcccgtgc gcacgggttc gcaaacggca tccgcactca ccatgcgtga agccccctcc
      961 ggattctctg ttcgcctctc gggagacgtg ccgcatctct ccgaatcgag ggccaataga
     1021 atcaggcggg cctgatttgt ccagactcag cgcgggttaa cgccacctta aggtccgggg
     1081 tgttgcaaaa cttcgacgct tccagcggag gtggaatcgt gctcaggcga gcgagcgctg
     1141 cacgatgtcg ccgacgtccg gcgaaaggtt ttgcgcgcgc gagatgcgct cgagggcgga
     1201 gcgcgcctgc gcgcgccggt gcggctccat cgtcttccac gggccgaagg cggtcagcag
     1261 ccgcgcggcg acctgcgggt tggccttgtc gagtgtcagc gcgatgtcgg ccaggaacgc
     1321 gtagccggcg ccgtcggcgc ggttgaactg ggtcggattg ttcaaggcga agctgccgac
     1381 cagcgagcgc acccggttgg ggttcgtgat cgagaaggac gggtggccca tgaggcccct
     1441 gacccgctcc agcgtgtcgc cttcggggat catcgcctgc aaggcgagcc atttatcgag
     1501 gacgagcggc tcgtcgcggt agcgctcggc gaagcgcgtg atcgcctgct cgcgcacgtc
     1561 tcccgggatc gtcgtcagca cggccagcgc cgcgagccga tcggtcatgt tggtcgccgt
     1621 cgcgagctgc tcgtcggcca ggcgcgtgcc gaggtcgcga tcgccggcgg cgatcaggtc
     1681 gagggcgacg ttgcgcaggg aacggcgccc ggcgctcgcc gcatcggggc tgtaggggcc
     1741 gggggaggcc agcttgccac ggaggtcgag cagccggtcg agcaggtgct ggccgatgct
     1801 gccgcggacg cgcttgcgcg cccggtagat cgcgtccggg tccacctggg caccgatctc
     1861 ctgcgcgatc tcggattcgc tcggcagggc gagcatgagg gcggcgaaag cggggtcgcg
     1921 ctccgcttcc tgcttcatga acgcgagcaa cgcggccgcg aggctgtcgg ccgcttccag
     1981 gccggcattg gccgacctgg cgaggcgcac cagcaggcgc atcgccacgg tctgggccgc
     2041 ctcccagcgg ctgaaggaat cgctgtcgtg gcgcaacagc gccaggagct cgtcgtcggc
     2101 aaggtcgagc gccaccttca cgggcgccga gaagcctcgg aacaccgagg gcacgggccg
     2161 cgacgcgaca ttgtcgaacg tgatcgcgcc ggaggcgcgg tcgagcacga acaggccgtt
     2221 ccccggtccc ggctgtccgc cca
//
LOCUS       DATAIQ010001161         3900 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_175418, whole genome shotgun sequence.
ACCESSION   DATAIQ010001161 DATAIQ010000000
VERSION     DATAIQ010001161.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3900)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3900)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3900
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_175418"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..375)
                     /locus_tag="VHN20_19170"
     CDS             complement(<1..375)
                     /locus_tag="VHN20_19170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727950.1"
                     /translation="MPHDAPGQSHWHEPKAGENAGFGTFKRKPMPYDSFMEAEGVPVY
                     RGIGVHRVQDLPLQPWARLGGRGSYIQLYGTEGLWGCYVVEIPPGGALNVERHLYEKI
                     VLVLEGRGSTDVWQGGQEKPQTF"
     gene            complement(460..1512)
                     /locus_tag="VHN20_19175"
     CDS             complement(460..1512)
                     /locus_tag="VHN20_19175"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEX2727951.1"
                     /translation="MLTRIVIAALALLGLGAGASADPVADFYKGKQVQLIVGYGTGGG
                     YDVYARALARHIGRHIPGNPSVVVQNMPGAGSLRAANFLYHAAPKDGTAFGLFARNMP
                     LLAILGSNPNVQFDPRKFTWLGSSSSFADDAYLLFVRKDAAVKSVDDARRPGGPPLIV
                     AGTAEGATGNDVPVLLRDALGLNIKLIAGYPDSGAIFLAVDRKEAEGRTVDYSSVKTS
                     KPDWLKPDGSMRVLVQFGRTTRHPDFPDVPTARELARDDKSRALIEVAELPLNLARPY
                     VAPPGVPKDRAKALQDAFMATHRDPQFLEDAGRIKMDVSPVTSEEALQLIDKISGAPP
                     EILKTIDKLLADNKGG"
     gene            complement(1796..3010)
                     /locus_tag="VHN20_19180"
     CDS             complement(1796..3010)
                     /locus_tag="VHN20_19180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX2727952.1"
                     /translation="MPHDASDQPHWHEPKAGENAGFGTFKRKPMPYDSFMEAEGVPVY
                     RGIGVRRVQDLPLEPWKRLGGRGSYIQLYGTEGLWGCYVVEVPPGGALNIERHLYEKN
                     VLVIEGRGSTEVWQEGDTKRQTFEWQKFSLFSIPLNAYHRFVNATNAPALLLCGTTAP
                     NVMNLIDNPHFIFNCPYDFNDRYTGAEDYFKPRDEIEADPIRGLAMRRTNFVPDVVNC
                     ELPLDNRRSPGYRRIEPSMAGNRFYVWIGQHENGRYSKAHKHASAAVLICLKGKGYTY
                     TWPDALGMTPWKEGRADKVMRQDYEAVGMVTAAPMSGDWFHQHFGVSKEPLRLMAWHG
                     PNNQRARKAGRPGEQLMDYGAIDLKKGGAAIPYHEEDPAIRREFEANLAKEGLTSRMD
                     AKLYDPPVDEAA"
     gene            complement(3130..>3900)
                     /locus_tag="VHN20_19185"
     CDS             complement(3130..>3900)
                     /locus_tag="VHN20_19185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727953.1"
                     /translation="GTAFGTFARNIPMLGLLKTNQNIQFDPRKFTWLGSSSSFANDAY
                     LLLVRKDATVKTVDEARRPGGSPIILGATAEGTSSDAMPTVLRDMLGFNIKQITGYTD
                     SGVLFMAMERKEIEGRTVGYSAVKANKPEWLQPNGPMQALVVFGRATRHADFPNAPTA
                     RELAKTDRDRKLIEVLEAPYALSRPYAAPPDVPPARAKALQAAFMAAHKDPGYLEEAA
                     KLNIDVSPIDGEQIRRLIEEIAATPPDMMKSIEKLIVD"
BASE COUNT          569 a         1268 c         1334 g          729 t
ORIGIN      
        1 gaaggtctgc ggcttctcct gaccgccttg ccagacgtcg gtgctgccgc gcccctcgag
       61 caccagcacg atcttctcgt agaggtgacg ctcgacattg agagcgccgc ccggcggaat
      121 ttcgacgacg tagcagcccc acaacccttc cgtcccgtag agctggatgt agctgccgcg
      181 gccgccgagc cgcgcccacg gctgcagcgg aaggtcctgg acgcggtgca cgccgatgcc
      241 gcggtagacc ggaacaccct ccgcctccat gaagctgtca taaggcatcg gcttgcgttt
      301 gaaggtgccg aagccggcat tttcgccggc tttcggctcg tgccaatggg attgtcccgg
      361 cgcatcatgc ggcatgaggc cctctcagct ttcctgacgt cgttctttcg tatcgcgtga
      421 tcgttttcgc cgaagcccgt ccgcgttgcc ggatcacgct cagccgccct tgttgtcggc
      481 gagcagcttg tcgatggtct tgaggatttc gggcggggcg ccgctgatct tgtcgatcag
      541 ttgcagcgct tcctcgctcg tcaccggact gacgtccatc ttgatgcgcc cggcgtcctc
      601 gagaaactgc ggatcgcggt gcgtcgccat gaaggcgtcc tgcagcgcct tggcgcggtc
      661 cttcgggaca cccggcggcg ccacgtaggg gcgcgccagg ttcagcggca gctcggcgac
      721 ctcgatcagc gcgcggctct tgtcgtcgcg cgccaactcg cgggccgtcg gcacgtcggg
      781 aaaatccgga tggcgcgtcg tgcggccgaa ctgcacgagc acgcgcatgc tgccgtccgg
      841 cttcagccag tcgggctttg acgtcttgac gctcgaataa tcgaccgtgc ggccttccgc
      901 ttccttgcgg tcgacggcga ggaagatcgc gccgctgtcg ggatagccgg cgatcagctt
      961 gatgttgagg ccgagcgcgt cgcggagcag cacaggcacg tcgttgccgg ttgcgccctc
     1021 ggccgtcccg gcgacgatca agggagggcc gccgggccgg cgcgcgtcgt cgacggattt
     1081 gaccgccgca tccttgcgca cgaacagaag gtaggcgtcg tcggcgaagc tcgacgagga
     1141 gccgagccac gtgaatttgc gcgggtcgaa ctggacgttc gggttgctgc cgaggatggc
     1201 gagcaacggc atgttgcggg cgaagaggcc gaacgccgtc ccgtccttcg gcgccgcgtg
     1261 gtagaggaaa ttggcggcac gcagactgcc cgcgcccggc atgttctgaa cgacgacgct
     1321 cgggttgccg ggaatgtgcc ggccgatgtg gcgagccagg gcgcgcgcat agacgtcgta
     1381 accgccgccg gtgccgtagc cgacgatcag ctgcacctgc ttgcccttgt agaaatcggc
     1441 gaccggatcg gcgctcgcgc cggcgccgag gccgagcagc gcaagcgccg cgatgacgat
     1501 tcgcgtcagc atgtgttccc tcccgatatc ctttccggtg gatcccgggt ttgcccgaga
     1561 tgcatcacta caattgcgca aaccggcaac agccgacttg cgccggggaa ggtggcgcgc
     1621 atgtagagca tgcgcgacgg atggggcggc aacattgtgt tctgaaatct tggcggtgcc
     1681 gccccacccc ggtcgctttc gcgacccggc cctccccacc gccagccggg tgttcccggc
     1741 ttgcgcccat catggcggat ctcgggatgt ccgagatccg cgggaaggga tgtcgttacg
     1801 ccgcctcgtc gaccggcggg tcgtagagct tggcgtccat gcgcgaggtc aggccttcct
     1861 tcgccagatt ggcctcgaac tcgcggcgga tcgccggatc ctcctcgtgg taggggatcg
     1921 cggcgccacc cttcttgagg tcgatggcgc cataatccat gagctgctcg ccgggacggc
     1981 cggccttgcg cgcacgctgg ttgttgggcc cgtgccaggc catcaggcgc agcggctcct
     2041 tgctgacgcc gaagtgctgg tggaaccagt ctccgctcat cggcgccgcc gtcaccatgc
     2101 cgactgcctc gtagtcctgg cgcatcacct tgtcggcgcg gccttccttc cacggcgtca
     2161 tgccgagcgc gtccggccac gtataggtgt agcccttgcc cttgagacag atcagcaccg
     2221 ccgccgaggc gtgcttatgc gccttcgagt agcggccgtt ctcgtgctgg ccgatccaca
     2281 cgtagaagcg gttgccggcc atcgacggct cgatgcggcg atagcccggc gagcgccggt
     2341 tatcgagcgg cagctcgcag ttgacgacgt cggggacgaa gttggtgcgc cgcatggcaa
     2401 ggccgcggat cggatcggcc tcgatctcgt cgcgcggctt gaagtagtct tcggcgccag
     2461 tgtagcggtc gttgaaatcg tacgggcagt tgaagatgaa gtgcgggttg tcgatcaggt
     2521 tcatcacgtt cggcgccgtg gtgccgcaca ggagcagcgc cggcgcgttg gtcgcgttga
     2581 cgaagcggtg gtaggcgttg agcgggatcg agaacagcga gaatttctgc cactcgaagg
     2641 tctgccgctt cgtgtcgcct tcctgccaga cctcggtgct gccgcggccc tcgatcacga
     2701 ggacgttctt ctcgtagagg tgccgctcga tgttgagggc gccgcccggc ggcacttcca
     2761 ccacgtagca gccccacagg ccttcggtgc cgtaaagctg gatgtagctg ccgcgcccgc
     2821 ccagccgctt ccaaggctcg agcggcagat cctggacgcg gcgcacgccg atgccgcgat
     2881 agaccggaac cccctcggct tccatgaagc tgtcataagg catcggcttg cgcttgaagg
     2941 tgccgaagcc ggcgttctct ccggctttgg gctcgtgcca atgcggctgg tcggatgcgt
     3001 cgtgcggcat gcggtcctct tcgttgttgt tgagcaatgc ggcggggcgc ccgcgccgga
     3061 cgccccccgc tcccgggtgg gtttaagcgg cgctgccggc cgattcaacc ggcgcgccga
     3121 gccgccgcgt caatcgacga tcagcttctc gatggacttc atcatgtccg gcggcgtcgc
     3181 ggcgatttcc tcgatcaggc ggcggatctg ctcgccgtcg atcgggctga cgtcgatgtt
     3241 gagcttcgcc gcctcctcga gatagcccgg atccttatgc gctgccatga acgccgcctg
     3301 cagcgccttg gcgcgcgccg gtgggacgtc cggcggcgcc gcatacggcc gtgacagcgc
     3361 atacggcgcc tcgagcacct cgatcagctt gcggtcgcgg tccgtcttgg ccagctcgcg
     3421 cgcggtcggc gcgttgggaa agtcggcgtg gcgggtggcg cgtccgaaca cgaccagcgc
     3481 ctgcatcggg ccattaggct gcagccattc cggcttgttc gccttgacgg cggaatagcc
     3541 gacggtgcgg ccttcgatct ccttgcgctc catggccatg aacagaacgc cgctgtcggt
     3601 gtagccggtg atctgcttga tgttgaagcc gagcatgtcg cgcagcacgg tcggcatggc
     3661 gtcgctcgag gtcccttcgg cggtggcgcc gaggatgatc ggtgacccac cggggcggcg
     3721 cgcctcgtcg acggtcttca cggtcgcgtc cttgcgcacg agaagcagat acgcatcgtt
     3781 ggcgaagctc gaggacgagc cgagccacgt gaacttgcgc gggtcgaact ggatgttctg
     3841 gttggtcttg agcagaccga gcatcgggat gttgcgcgcg aaggtgccga atgcggtgcc
//
LOCUS       DATAIQ010001162         6689 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_83365, whole genome shotgun sequence.
ACCESSION   DATAIQ010001162 DATAIQ010000000
VERSION     DATAIQ010001162.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 6689)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6689)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6689
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_83365"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..344
                     /locus_tag="VHN20_19190"
     CDS             <1..344
                     /locus_tag="VHN20_19190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009450217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016742 - hydroxymethyl-, formyl- and
                     related transferase activity [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="formyltransferase family protein"
                     /protein_id="HEX2727954.1"
                     /translation="LNIHPSLLPSFPGVDTHRQALSAGVLIHGCTVHFVTPKLDSGPI
                     IAQAAVRVVPGDTEETLAARVLAEEHRLYPMALRLICDGKARLDGAAVQHEFTWPGDV
                     ALLAPPSLQRA"
     gene            469..609
                     /locus_tag="VHN20_19195"
     CDS             469..609
                     /locus_tag="VHN20_19195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727955.1"
                     /translation="MLIGILCDAFHSPLRTAVREQPDLVAYRDRIVERFLPTAQIGRV
                     AA"
     gene            complement(690..1130)
                     /locus_tag="VHN20_19200"
     CDS             complement(690..1130)
                     /locus_tag="VHN20_19200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727956.1"
                     /translation="MVRRLVVAIFATAVIQQAQAQGASPLLTDEKVREALQTALSHIH
                     RARCEGLQPCAPATANEVRTPPISLDQARAAIRAGLASGGMQWCRLDWQQRSFRPMMD
                     HHRKVIGLNERQMALMGLLHGMHQGMVIRTMGNRECTPEMRARF"
     gene            complement(1137..3287)
                     /locus_tag="VHN20_19205"
     CDS             complement(1137..3287)
                     /locus_tag="VHN20_19205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012045651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin oxidoreductase family protein"
                     /protein_id="HEX2727957.1"
                     /translation="MNLAPKIEHRHSACPHDCPSTCALDVEVIDGRSIGRVRGAEDNT
                     YTAGVICAKVARYAERIHHPGRLLHPLKRTGPKGSGRFERVGWDEALDLVAQRFLEAE
                     QRIGPEAVWPYYYAGTMGLLMRDGIERLRHAKRYSGQFSTICTTIAWTGYIAGTGRLA
                     GADPREMAKSDCVVIWGTNAVHTQVNVMTHAMRARKERGARIVAVDVYMNATMKQADM
                     ALLVRPGTDGALACAVMHVLFRDGYADRDYLARYTDCPAELEAHLRTRDPLWASSITG
                     LSVAEIEAFAKLVGTTRRTFFRLGYGFARQRNGAVAMHAALCIPAVTGAWQHEGGGAF
                     HSNSGIFGWNKTMIEGSDVRDASVRRLDQSQIGRVLTGDAEALRHGPPVTALLIQNTN
                     PVSVAPEQELVKRGFARDDLFVCVHEQFMTETARMADVVLPATMFMEHDDLYQGGGHQ
                     HILLGPKLIDPPGECRSNHEVICALAGRVGARHPGFGMSPRELIDRTLRDSGHGTLDA
                     LEAQKWIDVQPPFRQAHYLDGFGYKDGKFRFRPDWTGVANRNAGGVGPWATMPSLPDH
                     WTAIDGATDAQPFRLATSPARSFLNSSFNETPTGRAKEKRPEVMMHPLDAAENGIADG
                     DWVRLSNPRGAVLIRTRLFEGVRRGVLIAEGIWPNDAFPDGKGINTLTGADAVAPYGG
                     AAFHDNRVALERIEPPTIPAGSADDLQPALVLPE"
     gene            complement(3423..4475)
                     /locus_tag="VHN20_19210"
     CDS             complement(3423..4475)
                     /locus_tag="VHN20_19210"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEX2727958.1"
                     /translation="MLINKRRAARVLAGGLLVLPGALLLSAGAGRAQTVEEFYKGKTI
                     NFVIGYSPGGGYDVYARLVARFMGEHIPGKPTIVPRNMPGASSRVAAAYVYNVAPKDG
                     TTLATADQSLAVAQVMGEKLQFDVTKFSFIGNPSAENNTTVAWHTSPVKTIEDAKKQE
                     LPVGATGGSTSSQYPRAMNAVLGTKFKVILGYPGGNDINLAMERGEVSGRGSNSWASW
                     KATRPDWLKEKKINILVQIGLTKAPDLPDVPLLMDLASNPEDKAVLKLLSAPSAIGRP
                     IFTTPGVPEDRVKALRAAFDATIKDPHFLDEAKKAGLEVDPVSGEEMQKIVNDIVATP
                     APVAKRLAEIIAEGKQ"
     gene            complement(4636..5058)
                     /gene="ndk"
                     /locus_tag="VHN20_19215"
     CDS             complement(4636..5058)
                     /gene="ndk"
                     /locus_tag="VHN20_19215"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011926284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004550 - nucleoside diphosphate kinase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HEX2727959.1"
                     /translation="MAVERTFSIIKPDATKRNLTGAVNAVIEKAGLRIIAQKRLRMTR
                     EHAETFYAVHRERPFFGELVEFMTSGPVVVQVLEGENAVAKYRDIMGATNPANAAEGT
                     IRKQFAQSVGENSVHGSDSPENADIEIRQFFSGNEIVG"
     gene            5238..5579
                     /locus_tag="VHN20_19220"
     CDS             5238..5579
                     /locus_tag="VHN20_19220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012317492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727960.1"
                     /translation="MTIPVSAAAAAAFLLVAVAAAAPAQSAPLSGPSGIILAQATSPG
                     SDTPARRSRRGREGASKKEPSTRQLATKERQRRCAAEWKAAKAAGKVEAGMKWPKYWS
                     ACNARLKGTAA"
     gene            5736..5972
                     /locus_tag="VHN20_19225"
     CDS             5736..5972
                     /locus_tag="VHN20_19225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727961.1"
                     /translation="MRIILTAFAFMAVAPAAVAQTNPGQNPATYFQNMQPQDAARLNQ
                     AAQSDPRARETLNQVEQKLNDAGHPAGKMLEKTR"
     gene            complement(6209..>6689)
                     /locus_tag="VHN20_19230"
     CDS             complement(6209..>6689)
                     /locus_tag="VHN20_19230"
                     /inference="COORDINATES: protein motif:HMM:NF012273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEX2727962.1"
                     /translation="QVPLLVDNENGRQLCQSASILEYLADRLGKFGGANLDERIRARE
                     WMFWDFDRLAPHIYRPRAARAGFRQFDPAVITQHETEGKAALKVLDDHLAGRSWLVGD
                     APTIADVDVYGVIAYAPDGGYDLGAYPNLSAWKQRVEALPGFAVASRLLPQETKAAA"
BASE COUNT         1033 a         2238 c         2275 g         1143 t
ORIGIN      
        1 tgctcaacat ccacccgtcc ctcctcccct cctttcccgg cgtcgacacg caccgtcagg
       61 cgctctcggc aggcgttctg atccacggct gcaccgtgca tttcgtcacg cccaagctcg
      121 attcggggcc gatcatcgcg caggcggccg tgcgtgtcgt gcccggcgac acggaggaga
      181 cgctggcggc ccgggtcctg gccgaggagc atcggctcta tcccatggcg ctgcgtctga
      241 tttgcgacgg caaggcgcgg ctcgacggcg cggccgtgca gcacgagttc acctggcccg
      301 gcgacgtggc gctgctggcg cctccgtccc tgcaacgagc ctgatttctg cctcgtcccg
      361 cgaggcgccg gcgggcgcac gtctcgaaaa ggccgaatcc gcgatccaca caacaaggtc
      421 ggagcaaagg tcagcgcgca aagggatgcg gatgatcaca tcggcgccat gctgatcggc
      481 atcctgtgcg acgcgttcca ctcgccactc aggacggcgg tcagggagca gcccgatctc
      541 gtcgcctacc gcgaccgcat cgtcgagcgc tttctcccga ccgcgcagat cgggcgcgtg
      601 gcggcataga ccggaaccaa tccggtttga aacgtcccgc tcttgagcgg cgatcggccc
      661 gaagaactca aagaggctcg cgcggacgct tagaaccttg ccctcatctc cggcgtgcat
      721 tcccggttac ccatggtgcg tatcaccatg ccctgatgca tcccatggag cagccccatt
      781 aaagccatct ggcgctcatt tagtccgatc accttccgat ggtgatccat cattggccgg
      841 aagctgcgtt gctgccagtc cagcctgcac cattgcattc cacctgaggc caagcccgcc
      901 cgaatggcag cccttgcttg gtcgagtgag atcggcggcg ttctgacttc gttagcagtt
      961 gccggagcgc agggctgcaa tccttcgcac cgggcgcgat gaatgtgcga gagcgcagtt
     1021 tgcaaggctt cgcgcacctt ctcatcagtg agaagcgggc tcgctccttg tgcttgggct
     1081 tgctggatca cggcggtcgc aaagatcgca acgacgagcc gtctcaccat tgcttttcac
     1141 tccggcagca ccagcgcggg ctgaaggtcg tcggcagatc cggcgggtat cgttggcggt
     1201 tcgatgcgtt cgagcgcgac gcgattgtca tggaacgcgg cgccgccata gggcgcgacc
     1261 gcgtcggcgc cagtcagcgt gttgatgcct tttccgtcgg ggaacgcatc gttcggccag
     1321 atgccttcgg cgatcagcac gccgcggcgc acgccctcga acaggcgcgt cctgatcagc
     1381 acggcgccac gcgggttgct gaggcgcacc cagtcgccgt cggcgatgcc gttctcggcc
     1441 gcatcgagcg gatgcatcat cacctcgggc cgtttttcct tggcacgccc cgtcggcgtc
     1501 tcgttgaagc tcgagttgag gaagctgcgg gccgggctcg tggcgagccg gaacggctgc
     1561 gcgtcggtgg cgccgtcgat cgccgtccaa tggtcgggca gcgaaggcat cgtcgcccat
     1621 ggtccgaccc cgccggcatt gcggttggcg acgcccgtcc agtccggccg gaagcggaac
     1681 ttgccgtcct tgtagccgaa gccgtcgaga taatgggcct ggcggaacgg cggctgcacg
     1741 tcgatccact tttgcgcctc gagcgcgtcc agcgtgccgt ggccggaatc gcgcagcgtg
     1801 cggtcgatca attcgcgcgg gctcatcccg aagccgggat ggcgcgcgcc gacgcggccg
     1861 gcgagcgcgc agatgacctc atgattggag cggcactcgc cgggcgggtc gatcagcttc
     1921 ggcccgagca ggatgtgctg gtggccgccg ccctggtaca ggtcgtcgtg ctccatgaac
     1981 atcgtcgcgg gcagcaccac gtcggccatg cgcgccgtct cggtcatgaa ctgctcgtgc
     2041 acgcagacga acaggtcgtc gcgggcgaag ccgcgcttga ccagctcctg ctcgggcgcc
     2101 accgagaccg ggttggtgtt ctggatcagc agcgccgtca ccggcgggcc gtggcgcagc
     2161 gcttcggcgt cgccggtcag cacgcgcccg atttgcgact ggtcgagacg gcggacggac
     2221 gcgtcgcgca cgtcggaccc ctcgatcatc gtcttgttcc agccgaagat gccgctgttg
     2281 ctgtggaagg cgccgccgcc ctcgtgctgc caggcgcccg tcaccgccgg gatgcagagc
     2341 gccgcgtgca tggcgacggc gccgttgcgc tgccgcgcga agccgtagcc gagacggaag
     2401 aacgtgcgtc tggtggtgcc gacgagcttt gcgaaagcct cgatctccgc gaccgagagg
     2461 cccgtgatgg acgaggccca gagcggatcg cgggtgcgca gatgcgcctc gagctcggcg
     2521 gggcagtcgg tgtagcgcgc aaggtagtcg cggtcggcat agccgtcgcg gaacagcacg
     2581 tgcatgaccg cgcaggcgag cgcgccgtcg gtcccgggcc gcaccagaag cgccatgtcg
     2641 gcctgcttca tggtggcgtt catgtagacg tcgacggcga cgatcctggc gccgcgctcc
     2701 ttgcgcgcgc gcatggcgtg cgtcatcacg ttgacctggg tgtgcaccgc attggtgccc
     2761 cagatcacga cgcaatcgga tttggccatc tcgcgcgggt cggcgccggc aaggcgcccg
     2821 gtgccggcga tgtagccggt ccaggcgatg gtcgtgcaga tcgtcgagaa ctggccggaa
     2881 tagcgcttgg cgtggcgcag gcgctcgatg ccgtcacgca tcagaaggcc catcgtgccg
     2941 gcgtagtaat acggccagac cgcctcgggc ccgatgcgct gctcggcctc gaggaagcgc
     3001 tgcgccacga gatcgagcgc ctcgtcccag cccacgcgct cgaaccgtcc ggagcccttc
     3061 ggcccggtgc gcttgagcgg atggagcagg cggccggggt gatggatgcg ctcggcgtag
     3121 cgcgccacct tcgcgcagat cacgccggcc gtatacgtgt tgtcctcggc gccgcgcacg
     3181 cggccgatcg agcgcccatc gatgacctcc acgtcgagcg cgcaggtcga ggggcagtca
     3241 tgcgggcacg ccgagtgccg gtgctcgatc ttgggcgcga ggttcacctg tgcgctccgt
     3301 ctgggtccag cgcggatccc tttcggtccc gctctggttt tctttaagct acatgatcgg
     3361 ttcggcgaag cggcggccac cgccggactc aagcccgggg gcaggctttc gccggatcgt
     3421 gcctactgct tgccttccgc gatgatctcg gcgagccgct tggcgaccgg cgccggggtc
     3481 gcaacgatgt cgttgacgat cttctgcatc tcctcgccgg aaaccggatc gacctcgagg
     3541 cccgccttct tggcctcgtc gaggaaatgc ggatccttga tggtcgcgtc gaaggccgcg
     3601 cgcagcgcct tgacgcggtc ttccggcacg cccggagtcg tgaagatcgg ccgtccgatc
     3661 gccgagggcg ccgacagcag cttgagcacc gccttgtcct cgggattgga ggcgagatcc
     3721 atcagcagcg gcacgtcggg gaggtcaggc gccttcgtca gcccgatctg aacaaggatg
     3781 ttgatcttct tctccttgag ccagtcggga cgggtcgcct tccacgacgc ccagctgttg
     3841 ctgccgcggc cggacacctc gccacgctcc atggcgaggt tgatgtcgtt gccgccggga
     3901 tagccgagga tcaccttgaa cttggtcccg agcaccgcgt tcatggcgcg cggatattgc
     3961 gacgaggtgc tgccgcccgt cgcgcctacc ggcaactcct gcttcttggc gtcctcgatc
     4021 gtcttcacgg gcgaggtgtg ccaggccacc gtggtgttgt tctcggcgct cgggttgccg
     4081 atgaaactga acttggtgac gtcgaactgc agcttctcgc ccatcacctg ggcgaccgcg
     4141 agcgactggt cggcggtcgc aagcgtcgtg ccgtccttcg gcgcgacgtt gtagacgtag
     4201 gcggcggcga cgcggctcga ggcgccgggc atgttgcgcg gcacgattgt cggcttgccc
     4261 gggatgtgct cgcccatgaa gcgcgcgacg aggcgcgcgt agacgtcgta gccgccgccc
     4321 ggcgagtagc cgatcacgaa gttgatcgtc ttgcccttgt agaactcctc gaccgtctgc
     4381 gcgcggccgg cgccggcgga gagcagcagc gcgcccggca gaacaaggag accaccggca
     4441 agaacgcgcg ccgcccgacg tttgttaatg agcatttcct gttttccctc gttgaggctg
     4501 ccgtgcgcgg gcagcccctg actattggcc tcgagtttac aggggatcgc cgccctgtga
     4561 acgttttgcg aatttcccac gccgtccgcg gcaggcatcc aggaggtcgc cttgcgggac
     4621 gggaatgacg tggcgctagc cgacgatctc gttgcccgag aagaactgcc ggatctcgat
     4681 gtcggcgttc tcagggctgt cggagccgtg caccgagttc tccccgaccg actgggcgaa
     4741 ctgcttgcgg atggtgccct cggccgcgtt ggccgggttc gtggcgccca tgatgtcgcg
     4801 gtatttggcg acggcattct cgccttccag cacctgcacg accaccgggc cggaggtcat
     4861 gaactcgacg agttctccga agaacgggcg ctcccggtgg accgcgtaga aggtctcggc
     4921 gtgctcgcgg gtcatgcgca ggcgcttctg cgcaatgatg cgcaggccgg ccttctcgat
     4981 cacggcgttg accgcgccgg tgaggttccg tttcgtcgcg tccggcttga tgatggagaa
     5041 ggtgcgctcg acggccatcg cgaaagatcc atgctttaag gggaaaggaa gtggcggcgc
     5101 ttatagctgc gcgccctgcc gccctcaacc gctgtttcgc ggcgcgacaa cttacctttg
     5161 ccgtagtttg ccgccgaaat gctacccgcg gcccgggcat caggcgccgg gctcgctcag
     5221 cacgggagga ttctgacatg acgatacccg tctcggcagc cgcagcggcg gctttcctgc
     5281 tcgtcgccgt agcagcggcg gcgccggcgc agtctgcgcc gctttccggc ccgtccggca
     5341 tcatcctggc gcaggccacc tcgcccggaa gcgacacgcc ggcccgccgg tcgcgccgcg
     5401 gccgcgaagg cgcatcgaag aaggagccgt cgacacggca gctggcgacc aaagagcggc
     5461 aacgcagatg cgcggccgaa tggaaagccg cgaaggcggc gggcaaggtc gaggccggga
     5521 tgaaatggcc gaaatactgg agcgcctgca acgcccgcct caagggcacc gccgcctgag
     5581 gtcctcagcc gtgctgcggg cgcggatggt taccggaccg ttaccggcaa agcggtcgat
     5641 tcgagcgacc ggataaaggc ttctttgcag gtccttggca tgatcggaac gcgcgctggc
     5701 tcggccggcg cgccaagctg cacgaggatc gtccgatgcg tatcatcctg accgctttcg
     5761 ccttcatggc cgtggcgccc gccgcggtcg cccagaccaa cccgggccag aacccggcga
     5821 cgtatttcca gaacatgcag ccgcaggacg ccgcccgcct caatcaggca gcgcaaagcg
     5881 acccgcgcgc ccgcgagacc ctcaaccagg tcgagcagaa gctcaacgac gccggtcacc
     5941 cggccggcaa gatgctcgag aagacgcgct gaggcgtcgg acgaacgccc atcgggccat
     6001 tcgcgtccca caactaaaag ttgttggacg cggcccgagt cggtctcgtc agcaggcgcg
     6061 cttcagtaga ttctcactat tttagtggcg ggcacccgcg aggcgcccgc ctctgcggcg
     6121 gccgtgggcg ccgccttcgc ctactctgag tggcaacacg ggggccggca gcgccggtcc
     6181 agcgggcggc ggtccgaggg attacacgtc aggcggccgc tttcgtctcc tggggcagca
     6241 gccggctggc aacggcgaag ccgggcagcg cctcgacgcg ctgcttccag gccgacaggt
     6301 tgggataggc gccgaggtcg tagccgccgt ccggcgcgta ggcgatgacg ccatagacat
     6361 cgacatcggc gatcgtcggc gcatcgccga ccagccagct gcgcccggcg agatgatcgt
     6421 cgagcacttt cagggccgcc ttcccttccg tctcgtgctg cgtgattacc gccggatcga
     6481 actggcgaaa gccggcgcgg gccgcgcgcg gccgatagat gtgcggcgcg agccggtcga
     6541 aatcccagaa catccactcg cgggcgcgga tgcgctcgtc gagattggcg ccgccgaact
     6601 tgccgaggcg gtcggcgaga tattcgagga tcgaggccga ctggcacagc tgacggccat
     6661 tctcgttgtc gacgagcagc ggcacctgg
//
LOCUS       DATAIQ010001163         3398 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_83693, whole genome shotgun sequence.
ACCESSION   DATAIQ010001163 DATAIQ010000000
VERSION     DATAIQ010001163.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3398)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3398)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3398
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_83693"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(93..923)
                     /locus_tag="VHN20_19235"
     CDS             complement(93..923)
                     /locus_tag="VHN20_19235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018261163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEX2727963.1"
                     /translation="MCYFSFLTWFMLPSFCRARREQMTRGAVDACKPAVAACTLPKSG
                     SPEFGAGHGIICFSSPCLPPPPPRREAQRHKLPHVPHPLKAAPRSCCYEAFRMDSALQ
                     ADLLGSVPHLRAFAVSLTADREKAEDLVQETLLRALTHMDRFQRGTNLQAWLSTILRN
                     QFYTGYRKRRREKEDPDGLIAAKVAVAPEQAVRLDYRDVLDAVAKLPPRQRQAILLIG
                     AEGRTYQEAAAICRTSLGTMKSRVNRARTRLAAVLGISRTDSFATEPLPVASTYEVAI
                     "
     gene            1070..1327
                     /locus_tag="VHN20_19240"
     CDS             1070..1327
                     /locus_tag="VHN20_19240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727964.1"
                     /translation="MYRERRTSETCRACGANNHVVVCYSGDAALHKPEAEYCVACGEV
                     IKSETCFAIFVDASPQALDATMQSFKSGLLCASLKPPAGLL"
     gene            1511..2584
                     /locus_tag="VHN20_19245"
     CDS             1511..2584
                     /locus_tag="VHN20_19245"
                     /inference="COORDINATES: protein motif:HMM:NF014476.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine cyclodeaminase family protein"
                     /protein_id="HEX2727965.1"
                     /translation="MTLILSNSDVEDLLTMRECIESFETAYLELAEGRALTRTRSDCI
                     VPTGRDGALYSLKSMDGVIPAYGVGAVRIDSDLVTWPKQGDNVRRVKVPAAANGRYVG
                     LVLLFSTETGEPLAIMPDGVMQRMRVGATSGLGAKHLARRNAATVALLGSGWQAGAQL
                     MAVCAIRNVEAIRCFSPTRANREAFAAEMQARIGVPIAPMASAEDTVRGADIVLCATN
                     AIDNVFFARWVEPGMHLSAIKPAEIEAQAIRRAERVVIHTGDTKPIHVMAAGVTAPDA
                     SAGKGWASAEQVDLKQFPTLPELIAGRVPGRASEREVTCFVNNLGLGFQFAAAGALVL
                     ANAKKRGIGRELPTDWFTQDVHP"
     gene            2618..>3398
                     /locus_tag="VHN20_19250"
     CDS             2618..>3398
                     /locus_tag="VHN20_19250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727966.1"
                     /translation="MTRIGFCITVLALLAGVAATGRPTAAQPIADFYKGKQVNVLIGF
                     GPGGANDAWARALARHMGKHIPGNPTLVPQNMPGAGTLKLANHLYNVAARDGSMFGLI
                     NRGIPLEPLLGGDAQFDPLQMSWIGSPDKDTTVCAARKDAQVQTMQDLFAKELVVGAT
                     GSGADTAVYPEFLAEFLGMKFKTIKGYPGSNEIVLAMERGEVEGICVAYESLARQRLA
                     RDGQINILFQAALEKDPGIPGDIPLALELAKSDAERKALELF"
BASE COUNT          606 a         1110 c         1120 g          562 t
ORIGIN      
        1 cggtgggtcg gcacggccca caactagggg gcgcgtgctg cgccacgacg ccgccgattg
       61 gtccggacag ataacgccaa ccggcgcgag ggtcagatgg cgacctcgta cgtcgatgcc
      121 accggcaaag gctcggtcgc aaagctgtcg gtcctcgaga ttccgagaac cgccgccaat
      181 cgcgtgcgtg cacggttgac gcggctcttc atcgttccga gcgaggttct gcagatcgct
      241 gcggcttcct gatatgtgcg cccttccgcg ccgatcagca ggatcgcctg ccgctggcgc
      301 ggcggcagct tcgcaacagc gtcgagcacg tcgcgataat ccagccgcac ggcctgctcg
      361 ggcgccacgg caaccttcgc ggcgatcagt ccgtcgggat cttccttctc gcggcggcgt
      421 ttgcggtagc cggtgtagaa ctggttgcgc agaatggttg acagccaggc ctgcaggttg
      481 gtgccgcgtt ggaaacggtc catgtgcgtc aacgcccgca gcagtgtctc ctgaacgagg
      541 tcttcggctt tctcgcggtc ggctgtgagc gacaccgcga aagcgcgcag atgcggaacg
      601 gaacccaaca gatcggcttg cagagcactg tccatgcgaa aggcctcata gcaacaggat
      661 cttggcgccg ccttcagcgg atgcgggacg tgtggcaact tgtgtctttg tgcctcccgc
      721 cgaggagggg gaggcgggag gcacggggag gagaagcaga tgatgccgtg accagcgccg
      781 aactcgggac tgcccgactt cggtaatgtg caagccgcaa cagctggctt gcatgcgtca
      841 acagcaccac gagtcatttg ttcccgccgc gctcgacaaa aacttggcag cataaaccag
      901 gttaaaaaac tgaaataaca catgttattt cgatggcgac caacgcctgc aacagccatt
      961 cgggcccctg agtcatcagg ccgaacgaga tgcgcggtta gcttatgttg atgcgcgcca
     1021 ccacggcagc aggctagctt ccgcatgcca atgtggagtc agcctgcaca tgtatcgtga
     1081 acgcagaacc agcgagacgt gccgcgcctg cggcgcgaac aaccatgtcg tcgtgtgcta
     1141 cagcggcgac gcggctctgc acaagccgga agcggaatat tgcgtggcgt gcggcgaagt
     1201 catcaagtcg gagacgtgct tcgcgatatt cgtcgacgcg tcgccgcagg cgctcgatgc
     1261 gacgatgcag tccttcaaga gcggactgct ctgcgcgtct ctcaaaccgc ccgccggcct
     1321 gctgtagcct ccgcccgctc gcatccccgg tcgtccggcg tcttgacggg agcgctccga
     1381 ccgcgagcgc ctgcctctct cccgagcccc ggggacccag atcccttcaa gccgcgtcga
     1441 tcccgctgta acgtctccgg cattcatgat gccatgcagg caagcgcgtg gggatgcggg
     1501 ggagaatcgg gtgacgttga tcctgtccaa ttcggacgtc gaggacctgc tcacgatgcg
     1561 cgagtgcatc gagagcttcg agaccgccta tctggaactc gccgaaggcc gggcgctgac
     1621 ccgcacccgg tcggactgca tcgttccgac gggccgtgac ggcgcgctct acagcctgaa
     1681 atcgatggac ggggtgatcc ccgcttacgg cgttggcgcc gtgcgcatcg attcagacct
     1741 cgtcacctgg ccgaagcagg gcgataacgt ccggcgcgtc aaggtgccgg cggcagccaa
     1801 cggccgctat gtcgggctcg tactgctttt ttcgacggag acaggtgagc ccctcgcgat
     1861 catgcctgac ggggtcatgc agcgcatgcg cgtcggcgcg acgagcgggc tcggcgccaa
     1921 acacctggcg cgaaggaacg cggctactgt cgctcttctc gggtccggat ggcaggccgg
     1981 agcccagctg atggcggtct gcgccatccg caatgtcgag gcgatccgct gcttcagccc
     2041 gacgcgcgcg aaccgggagg cgttcgcagc cgagatgcag gcccgcatcg gcgtgccgat
     2101 cgcgcccatg gcaagcgctg aggacacggt gcgtggcgcc gacatcgtgc tgtgcgcaac
     2161 caacgcgatc gacaacgtct tcttcgcgcg ctgggtcgaa cccggcatgc atctctcggc
     2221 catcaagccg gccgagatcg aagcgcaggc gatcaggcgg gccgagcgcg tcgtcatcca
     2281 caccggggat acgaagccca tccacgtcat ggccgcgggc gtgaccgcgc ccgacgcgag
     2341 cgccggcaag ggatgggcat cggccgagca ggtcgacctc aaacaatttc cgacgctccc
     2401 cgagttgatc gccgggcgcg ttcccggcag agcctccgag cgggaggtca cgtgcttcgt
     2461 caacaatctc gggctcggct tccagttcgc cgccgccggc gcgctcgtgc ttgcgaacgc
     2521 gaagaagcgc ggcatcggcc gcgagctgcc gaccgactgg ttcacacagg acgtgcatcc
     2581 gtgaccgctt atcttttcgc ggacagggga gggactcatg acgcgcatcg ggttttgcat
     2641 caccgtgctc gcgctgctcg ccggcgtcgc cgcgaccggc cggccgacgg cagcgcagcc
     2701 gatcgcggat ttttataaag gcaagcaggt caacgtcctg atcggcttcg ggcccggcgg
     2761 cgccaacgac gcgtgggccc gcgcgctcgc tcggcatatg ggcaagcaca tcccgggcaa
     2821 tccaacgctc gtgccgcaga acatgccggg cgccggcacc ctcaagctgg ccaatcatct
     2881 ctacaacgtc gcggccaggg acggctcgat gttcggcctg atcaacaggg gcatcccgct
     2941 cgagccgctg ctcggcggcg acgcccagtt cgacccgttg cagatgagct ggatcggcag
     3001 ccccgacaag gacaccaccg tgtgcgccgc gcgcaaggac gcgcaggtgc agacgatgca
     3061 ggacctgttc gcgaaggagc tcgtggtcgg agccaccggg tcgggcgccg acaccgctgt
     3121 ctacccggag ttcctggccg agttcctcgg catgaaattc aagaccatca agggttatcc
     3181 gggctccaac gagatcgtcc tggcgatgga gcgcggcgag gtggagggca tctgcgttgc
     3241 ctacgagtcg ctggcacgcc agcgtctggc gcgcgacggg cagatcaaca tcctgtttca
     3301 ggcggcgctg gagaaggacc cgggcattcc cggcgacatt ccgctggccc tcgagctcgc
     3361 caagagcgat gccgaacgca aggcgctcga gctgtttc
//
LOCUS       DATAIQ010001164         3128 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_176615, whole genome shotgun sequence.
ACCESSION   DATAIQ010001164 DATAIQ010000000
VERSION     DATAIQ010001164.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3128)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3128)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3128
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_176615"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..937
                     /locus_tag="VHN20_19255"
     CDS             <1..937
                     /locus_tag="VHN20_19255"
                     /inference="COORDINATES: protein motif:HMM:NF025017.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEX2727967.1"
                     /translation="RPLDEIIVVDDFSSDGTGDIARSLGVTVLRPPRNTGSKAGAQTF
                     ALPYLRTQFCMAIDADTELAADAVEQIMAPLADPSVAASCGFVLPRHVGTVWERGRYI
                     EYLFAFTFYKPIQDFFQKPMISSGCFSAYRTDVLRGVGGWSNRTMAEDMDLTWTLYQR
                     GHGVRFVPEALCYPIEPHDFNFLGKQLRRWSHGFVQNVRTHWRGVLHLPYLRSILAVG
                     LWDATIASLAYLILLPLLAVLIHPLFLLGYLIDLPAVAIPVIAKGIERGELGRVLLSL
                     PCFLILRLVNSAYMLRAVWSELVVGRSLLVYEKGH"
     gene            940..1353
                     /locus_tag="VHN20_19260"
     CDS             940..1353
                     /locus_tag="VHN20_19260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727968.1"
                     /translation="MAGLPGTGLGGVFYALLIMWMAMREAWLALRGSSSAARWGKIGR
                     FGALLGAIVAALWGEGWLLQQIFGPAAGILGTAEPGSARALAVGALAPALAWAPFVVL
                     AALIVAMHVARLLLPLRVHAPTEDSSDAPAVREAA"
     gene            1408..2688
                     /locus_tag="VHN20_19265"
     CDS             1408..2688
                     /locus_tag="VHN20_19265"
                     /inference="COORDINATES: protein motif:HMM:NF014577.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HEX2727969.1"
                     /translation="MDSGVGTFRFLRRIVLLAIAMGSAVASSAAAADEPLGACPELGR
                     GYLRLPGMAACVALAGDLKVDYRQRFSRQEIFAEPQRDTTGPHIAYELGRLPEDRSLG
                     RSRTELKTFFNTITPTEFGMLSTSIGFKSQVETPPRNPNDLVNEFNRTGKRTILERAS
                     IQLGGFSAGYMPSFFDFTPSLSYTTAYASEINTTVLAYTHRIPGIIDLTLSAEDGSER
                     RLADPVWGSYRDARAPDTVIAARKPLDWGNIKVAAAAHPVSAMAVAECCGVAEGRDLG
                     WAAMVGIEGWFDVGSMSSEILLNVALARGGLSYLGATNQPADFAVSAHGRVFLTDGRA
                     AVAAYAHWWTKQIRTVFTFSAYETSLDTDSMRWRTSGSITQAALELVPRRGFVMGVEV
                     NYHQDRAQGGDQAVLRPSVSNEFLSSVVFMRTRF"
     gene            2840..>3128
                     /locus_tag="VHN20_19270"
     CDS             2840..>3128
                     /locus_tag="VHN20_19270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727970.1"
                     /translation="MPSKKYNVLILGASYGSLLATKLAMAGHDVKLVCLPAEAEAINR
                     DGAVVRLPVRGRDPVEIRSKSLPGKVTADGPGAVNPADYDLVGLAMQEPQYR"
BASE COUNT          454 a         1051 c         1051 g          572 t
ORIGIN      
        1 gcgcccgctc gacgagatca tcgtcgtcga cgatttctct agcgacggca ccggcgacat
       61 cgcgcgatct ctcggcgtca ccgtgttgcg gccgccgcgg aacacggggt ccaaggcagg
      121 tgcgcagacc ttcgcgctgc cgtacctgcg cacgcagttc tgcatggcga tcgacgcaga
      181 taccgagctc gcggccgatg ccgtcgaaca gatcatggcg ccccttgcgg acccgtccgt
      241 ggcggcatct tgcggcttcg tgttgccgcg gcacgtcggt acggtgtggg agcgcggccg
      301 ctacatcgag tatctgttcg ccttcacttt ctacaagccg atccaggatt tcttccagaa
      361 gcccatgatc tcgtcgggct gcttctcggc ttatcgcacg gatgtcctca ggggcgtcgg
      421 cgggtggtca aaccgcacca tggcggaaga catggatctg acctggacgt tgtaccagcg
      481 cggccacggc gtgcgcttcg tgcctgaggc cttgtgctac ccgatcgagc cgcatgattt
      541 caattttctc ggaaagcagc tgcgccgttg gtcgcacggc tttgtgcaga acgtgcgcac
      601 gcattggcgc ggggtcctgc acctgccgta tctgcgatcg atcctcgcgg tcgggctgtg
      661 ggacgcgacc atcgcctccc tggcctacct gatcctgctg ccgctgctgg cggtgctgat
      721 ccacccgttg ttcctgctcg gctatctgat tgatctgccg gcagtcgcga tccctgtgat
      781 cgccaaaggc atcgagcgcg gcgaactcgg gcgggtgctg ctgagcctgc cgtgtttcct
      841 gatcctgcgg ctcgtcaact cggcctacat gctgcgcgcc gtctggtcgg agctggtcgt
      901 cggccgcagc ctgctcgtct acgaaaaggg gcattgatca tggcgggact gccgggaacg
      961 ggcctggggg gcgtctttta cgcgctcctc atcatgtgga tggcgatgcg cgaggcgtgg
     1021 cttgccctgc gcggctcgag cagcgccgcc cgatggggaa agatcgggcg gttcggggcg
     1081 ctgctcggcg ccatcgtcgc cgcgctgtgg ggggaaggct ggctgctgca gcagatcttc
     1141 ggcccggctg cgggcattct cgggactgcc gagccgggga gcgcacgagc gctcgcggtc
     1201 ggcgcgctgg ccccggcgct cgcctgggcg ccgttcgtgg tcctcgcagc actgatcgtc
     1261 gcgatgcatg tggcgcggct gcttttgccc ttgcgtgtgc acgcgcccac ggaggacagt
     1321 tccgacgcgc cggctgtgcg cgaggcagcc tgacccttcg tcgacgcctc gcctacccgc
     1381 cagcgcgtca cgcagtgcac cgtgggcatg gactctgggg tcggcacgtt tcgtttcctg
     1441 cgccgcatcg tcctgctggc gattgcgatg ggcagcgctg tcgcctcgtc ggctgctgct
     1501 gctgatgagc ctctcggcgc gtgcccggag ctcggccgcg gctacctccg ccttccgggg
     1561 atggcggcct gtgtggccct cgccggcgac ctgaaggtcg actaccggca gcgcttttcg
     1621 cgccaggaga tctttgccga gccgcagcgg gacacgacag ggccgcatat cgcttacgag
     1681 ctcgggcgtc tgccggagga tcgctccctc ggacggtcgc ggaccgagct gaagaccttc
     1741 ttcaacacca taacgccaac cgagttcggc atgctgtcga cctcgatcgg gttcaagtct
     1801 caggtcgaaa cgccgccacg caatccgaac gacctcgtca acgagttcaa ccgcaccgga
     1861 aagcgcacca tcctcgaacg tgcgagcatc cagcttggcg gcttctcggc cggctacatg
     1921 ccgtcgttct tcgattttac cccgagcctc agctacacga ccgcctatgc gtcggagatc
     1981 aacaccacgg tgctcgccta cacgcaccgg atccccggca ttatcgatct gacgctgtcg
     2041 gcggaggacg gcagcgagcg tcggctcgcc gatcccgtct ggggcagcta ccgcgacgcg
     2101 cgcgcgccgg acacggtgat tgccgcgcgc aagccgctcg actggggcaa catcaaggtg
     2161 gccgctgccg cccatccggt ctcggccatg gcggtcgcgg aatgctgcgg cgtcgcggag
     2221 ggccgcgatc tcggctgggc ggcgatggtc gggatcgagg gctggttcga cgtcggcagc
     2281 atgagctcgg agatcctgct caacgtggcg cttgccagag gcggcttgag ctacctcggt
     2341 gccaccaacc agccggccga ttttgccgtg tcggcccacg ggcgcgtgtt tctcacggac
     2401 ggtcgtgccg cggtcgctgc ttacgcccat tggtggacga aacagatccg gaccgtgttc
     2461 accttctcgg cctacgagac cagcctcgac acggacagca tgcgctggcg aacctcgggt
     2521 tcgatcaccc aggcggcgct cgagctcgtg ccgcggcggg gtttcgtgat gggtgtcgag
     2581 gtaaactacc atcaggacag ggcgcaaggc ggcgatcagg ccgtcttgcg gccgtccgtc
     2641 agcaacgagt tcctcagcag cgtcgtgttc atgcgcacac gcttctgacg ccgccgcggt
     2701 gggcgcgcct gccttccgca ggggcgcgca gcgattgcac cgccggcatt ccctgaatag
     2761 catcgcgccg atcacaggtg gcggagagcg ggcgcaaacc tcgctccggt ccgcccgcca
     2821 gtgccggagg gaacgcaacg tgccgagcaa gaaatacaat gtgctgatcc ttggagcatc
     2881 ttatggctcg ctgctggcca ccaagctggc gatggccggc cacgacgtga agctcgtctg
     2941 cctgccggcc gaggcggagg cgatcaaccg cgacggcgcc gtcgtgcgcc tgccggtcag
     3001 gggccgggat ccggtcgaga tccgctccaa gtcgctgccc ggcaaggtca cggccgacgg
     3061 gccgggcgcg gtcaacccgg ccgattacga cctcgtcggc ctcgccatgc aggagccgca
     3121 ataccgct
//
LOCUS       DATAIQ010001165         4995 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_176910, whole genome shotgun sequence.
ACCESSION   DATAIQ010001165 DATAIQ010000000
VERSION     DATAIQ010001165.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 4995)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4995)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4995
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_176910"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..858)
                     /locus_tag="VHN20_19275"
     CDS             complement(<1..858)
                     /locus_tag="VHN20_19275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013950211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia channel protein"
                     /protein_id="HEX2727971.1"
                     /translation="MIFRLATAAILGGLGLSCLADPALAQAAAAPTPNKGDTSWMLIA
                     TCLVLMMSIPGLALFYGGLVRTKNMLSVLTQVFAIVCIVCLIWVIYGYSLAFTNGGGL
                     NDFVGGLSKAFLRGVDPNSNAATFSNGVVIPELAYICFQMTFAMITPALIVGGFVERF
                     KFSALVLFMVLWVTFIYFPMAHMVWYWGGPDAIGDAAKAVAAAADGAAKTAAQAKLDE
                     VTADAGLVYKWGALDFAGGTVVHINAGIAGLVGCLVIGPRIGFKTEPMPPHSLVMTMI
                     GASLLWIGWF"
     gene            complement(892..1230)
                     /locus_tag="VHN20_19280"
     CDS             complement(892..1230)
                     /locus_tag="VHN20_19280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007559495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HEX2727972.1"
                     /translation="MKIVMAIIKPFKLEEVRDALTTLGVQGLTVTEVKGYGRQKGHTE
                     IYRGAEYAVSFLPKIKIEVAVPTDLAGRVSDAIAAAARTGQIGDGKIFIMPLEKALRI
                     RTGETDADAL"
     gene            complement(1434..2690)
                     /locus_tag="VHN20_19285"
     CDS             complement(1434..2690)
                     /locus_tag="VHN20_19285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009734731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008519 - ammonium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0072488 - ammonium transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter"
                     /protein_id="HEX2727973.1"
                     /translation="MPALAQEAKIDAADTAWMISATALVLMMTIPGLALFYAGMVRKK
                     NLLATMAQSVAATALISILWVVAGYSLAFTGEGAWIGSLNRIVLAGMGMDAISPLAKT
                     IPESLFAIYQMTFAIITCALISGSVADRMRFSAFLLFISLWLFLVYVPIAHWVWGGGF
                     LGALGVLDFAGGTVVHINAGIAGLVAALVLGKRHGYGEENLAPYDLTMAVIGTGLLWV
                     GWFGFNGGSALGAGSRASMAILVTHLAACAGALTWMAIEWASRGKPSVLGVISGAVAG
                     LGTITPASGFVLPWHGLVIGTLAGAVCCWACISLKPRLGYDDSLDVFGVHGVGGVLGT
                     FCAGVFAVGALSATGDVPGGSPGLLEGNVRQVLVQLLGIAATVAWCGLATFAILKITE
                     MFVPLRVSDESERIGLDVALHGESVK"
     gene            complement(2782..3120)
                     /locus_tag="VHN20_19290"
     CDS             complement(2782..3120)
                     /locus_tag="VHN20_19290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007559495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HEX2727974.1"
                     /translation="MKLVSAIIKPFKLDEVRDALTAVGVQGLTITEVKGYGRQKGHTE
                     IYRGAEYVVSFLPKVKVEVVVPTEEVEAVVSAIMGAARTGQIGDGKVFVTGIERALRI
                     RTGETDADAL"
     gene            complement(3379..4248)
                     /gene="tesB"
                     /locus_tag="VHN20_19295"
     CDS             complement(3379..4248)
                     /gene="tesB"
                     /locus_tag="VHN20_19295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018701002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA];
                     GO_process: GO:0006637 - acyl-CoA metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase II"
                     /protein_id="HEX2727975.1"
                     /translation="MSRAVDDLLAILDLEQLEHNLFRGSSPQVGWQRVFGGQVIGQAL
                     VAACRTVDTQTRPPHSLHAYFLLPGDPKVPIIYEVDRIRDGKSFTTRRVIAVQHGAAI
                     FSMSASFHAAESGFDHAAAMPSVPGPEDLPSEQEIRSGVLPMMPDPVRVYFERERPIE
                     LRPVEYTRYLARQPMEPKFNVWIRATGRLPDDPAIHQCVLAYASDMTLLDSSLIAHGR
                     TVFERSIQAASLDHALWIHRPFRADEWLLYSQESPSASGALGFARGLIFSRDGALVAS
                     VAQEGLIRQRRPD"
     gene            4368..>4995
                     /locus_tag="VHN20_19300"
     CDS             4368..>4995
                     /locus_tag="VHN20_19300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015928502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEX2727976.1"
                     /translation="MQQHAGASSRPAWRIVIAGGGVAGLPLALALKQALGDALEVTVC
                     DPALNRDPAADKRAYAIAAGARRMLATLGIWDAIADRTQPILDMVITDSRLRDPVRPT
                     FLTFGGEVEPGEPFAHMVESGALVTALVDACRRDGVMLRPLGVRTFRGSGDGVAVQLD
                     DDTILDAALLVAADGGRSRLRQEAGITWVGWSYPQSGIVATVAHERDHE"
BASE COUNT          863 a         1649 c         1731 g          752 t
ORIGIN      
        1 gaaccagccg atccacagca gcgaggcgcc gatcatcgtc atgaccaggc tgtgcggggg
       61 catgggttcg gtcttgaagc caatgcgcgg cccgatcacc aggcagccga ccaggccggc
      121 gatgcccgcg ttgatgtgca ccacggtgcc gccggcgaaa tcgagggcgc cccatttgta
      181 gacgaggccg gcatcggcgg tgacctcatc gagcttggcc tgcgccgccg tcttggcggc
      241 gccgtcggcg gccgcggcga cggccttggc ggcatcgccg atcgcgtccg ggccgcccca
      301 gtaccagacc atgtgggcca tcgggaaata gatgaaggtc acccacagga ccatgaacag
      361 gaccagcgcc gagaacttga agcgttcgac gaagccgccg acgatcaggg ccggcgtgat
      421 catggcgaag gtcatctgga agcagatgta ggcgagttca gggatgacga cgccgttcga
      481 gaaggtcgcg gcattggaat tgggatcgac cccgcgcagg aaggccttgg acaggccgcc
      541 gacgaaatcg ttgaggccgc cgccgttggt gaaggcgagg ctgtagccgt agatcaccca
      601 gatcaggcag acgatgcaga cgatggcgaa gacctgggtc agcaccgaca gcatgttctt
      661 ggtgcgcacg aggccgccgt aaaacaatgc caggcccggg atcgacatca tcaggacgag
      721 gcacgtggcg atcagcatcc acgacgtgtc gcccttgttg ggggtcgggg cggcggcagc
      781 ctgggccagg gccggatcgg cgaggcagga cagcccgagc cccccgagaa tcgcggcagt
      841 tgcgaggcgg aaaatcatcg atcgactccg atctttcttg tgctggggat gtcagagcgc
      901 gtcggcgtcg gtttcgccgg tgcggatgcg cagcgccttc tcgagcggca tgatgaagat
      961 cttgccgtcg ccgatctggc ccgtgcgggc cgccgccgcg atcgcatcgc tgacgcgccc
     1021 tgcgagatcg gtggggaccg caacctcgat cttgatcttg ggcaggaagc tgacggcgta
     1081 ttcggcgccg cgatagattt ccgtatggcc cttctggcgg ccgtaacctt tgacttcagt
     1141 aaccgtcagg ccttgcacgc cgagggtcgt gagcgcgtcg cgcacctcct ccagcttgaa
     1201 cggcttgatg atggccatga caattttcat gaggcttgcc cccggtatcg aagcggcttc
     1261 gaatcgcgcc gcagataggc ggaggaaaac aagtgccgtg ccagaacggc cgtgccttcg
     1321 gcaggatgat taaatttgtg ctttcgcccg cgggaccgcc gccggcagcg gccgcaacgg
     1381 ccccatggcc gccggcaaat cgggcagcct gcctaaaatg tgggcaggtc ggcttatttc
     1441 acggattcgc cgtgcagggc gacatcgagc ccgatgcgtt cggattcgtc gctcacgcgc
     1501 agcggcacga acatctcggt aattttcagg atcgcgaagg tggcgagacc gcaccacgcg
     1561 accgtcgcgg cgatgccgag gagctggacc agcacctgcc tgacattgcc ttcgagcagc
     1621 ccgggcgacc cgcccgggac gtcgccggtg gccgagagcg cgccgacggc gaacaccccg
     1681 gcgcagaagg tgccgagcac cccgccgacg ccgtgcacgc cgaacacgtc gagggaatcg
     1741 tcatagccga gccgcggctt caggctgatg cacgcccagc agcagaccgc tccggccagg
     1801 gtgccgatga cgaggccatg ccagggcagg acgaagccgg aagcgggcgt gatggtgccg
     1861 aggccggcga ccgcgcccga gatgacgccg agcaccgagg gcttgccgcg gctcgcccac
     1921 tcgatcgcca tccaggtcag cgcgccggcg caggcggcca ggtgggtgac gaggatggcc
     1981 atgctggcgc gcgacccggc gcccagggcc gagccgccgt tgaagccgaa ccagccgacc
     2041 cagagcaggc ccgtgccgat caccgccatg gtcagatcgt agggcgcgag attctcctcg
     2101 ccataaccgt gccgcttgcc gaggacgagc gccgcgacga ggccggcgat gccggcattg
     2161 atgtgcacca ccgtgccgcc ggcgaagtcg agcacgccga gcgcgcccag gaagccgccg
     2221 ccccacaccc aatgtgcgat cggcacgtag accaggaaca gccacaacga gatgaacagc
     2281 aggaaggccg agaagcgcat gcggtccgcc accgacccgg aaatcagcgc gcaggtgatg
     2341 atcgcaaagg tcatctggta gatcgcgaac aggctctcgg ggatcgtctt ggcgagcgga
     2401 ctgatcgcat ccatgcccat cccggcgagc acgatgcggt tcagggagcc gatccacgcg
     2461 ccctctccgg tgaacgcgag gctgtagccg gcgacaaccc agaggatcga gatcagggcc
     2521 gttgcggcga cgctctgcgc catggtggcg agcaggttct tcttgcgcac cattcccgca
     2581 tagaagagcg cgaggcccgg gatggtcatc atcagcacga gcgcggtcgc cgagatcatc
     2641 caggcggtat cggccgcatc gatcttggcc tcctgcgcca gcgccggcat cgcgaacagc
     2701 gccggcccgc ctgccgcgac cagagcccgg ctcgggatcc gcaactgcgt catgtgccct
     2761 ccccctgcag cagcactcgt ttcagagcgc gtcggcgtcg gtctccccgg tccggatgcg
     2821 cagcgcccgc tcgatgcccg tcacgaagac ttttccgtcg ccgatctgcc cggtcctggc
     2881 ggcgcccatg atcgccgaca cgacggcctc gacctcctcg gtcggcacga caacctcgac
     2941 cttcaccttg ggcaggaagc tcacgacgta ttcggcgccg cggtagatct cggtatggcc
     3001 cttctggcgg ccgtagccct tgacctcggt gatggtgagg ccttgcacgc cgacggcggt
     3061 gagcgcgtcg cgcacctcgt caagcttgaa cggcttgatg atcgcggaaa ccagcttcat
     3121 cgccccccca gccttcggcg cgatcctgcc ggcgtttgca tgaacgcctg agcggcagag
     3181 gcccgggatc gggcggatgc cgttgatggc cgaactgcga caggatgcga cgcaccgccg
     3241 ctctgtgtaa agggcggcga gagcgggatc gattcaggtt gaatcgatcc cgctctcgtt
     3301 cttattgaac cgcatggtct ttgtcggcga agcggtaccc acttcgccgg atcatgctct
     3361 aggaccggcg cgccggcgtc agtccggtcg gcgctgccgg atcaggcctt cctgcgcgac
     3421 cgacgccacc agggcgccgt cgcgggaaaa gatcagcccg cgcgcgaagc cgagcgcgcc
     3481 ggaggcgctc gggctttcct gggaatagag cagccactcg tcggcccgga acgggcggtg
     3541 gatccacagg gcatggtcga ggctcgcggc ctggatcgag cgctcgaaca cggtgcggcc
     3601 atgggcgatc agcgacgagt cgagcagcgt catgtcggac gcataggcga gcacgcattg
     3661 gtggatggcg ggatcgtccg gcagtcggcc cgtggcgcgg atccatacgt tgaacttcgg
     3721 ctccatcggc tgtcgcgcca gatagcgcgt gtattccacg ggcctgagct cgatcggccg
     3781 ctcgcgctcg aaatagacgc gcaccggatc gggcatcatc ggcaggacgc cggacctgat
     3841 ctcctgctcg ctcggcagat cttccgggcc cgggacggac ggcatggccg cggcatggtc
     3901 gaagccggat tccgcggcgt ggaaggacgc cgacatggag aagatggccg cgccatgctg
     3961 cacggcgatg acgcgccggg tggtgaagct cttgccgtcg cggatgcgat cgacctcata
     4021 gatgatcggc accttgggat cgccaggcag caggaaatag gcgtgcagcg agtgcggcgg
     4081 ccgggtctgc gtgtcgacgg tgcggcacgc ggcgacgagc gcctggccga tgacctggcc
     4141 cccgaacacg cgctgccagc cgacctgcgg gctgctgccg cggaaaagat tgtgctccag
     4201 ctgctcgaga tcgaggatcg caagcaggtc gtcgacggcg cgcgacatgg ccaggctgtc
     4261 cgaaacgtgc ggttgagccg cggagagtgg acggcctgca ttgcagactt cccccgcgca
     4321 ctcaagccgg gcttgccgga cgcgcaaaag cgcgcatagc tggagagatg cagcaacatg
     4381 cgggagcatc atcgcggccg gcctggcgca tcgtgatcgc cgggggcggc gttgccggtc
     4441 tgccgctggc gttggccctc aagcaggcgc tcggcgacgc gctcgaggtg acggtctgcg
     4501 accccgccct gaaccgcgac ccggccgccg acaagcgcgc ctatgccatc gcggccggcg
     4561 cgcggcgcat gctcgcgacc ctcggcatct gggatgcgat cgccgaccgg acgcagccga
     4621 tcctcgacat ggtgatcacc gacagtcggt tgcgcgaccc ggtgcgcccc accttcctga
     4681 cctttggcgg cgaggtcgag ccgggcgagc cattcgcgca catggtcgag agcggcgcgc
     4741 tcgtgaccgc tctcgtggac gcatgccgca gggacggcgt catgctgcgc cccctcggcg
     4801 ttcgcacgtt ccgcggctcc ggcgacggcg tcgccgtcca gctcgacgac gacacgattc
     4861 tcgacgcggc tttgctcgtc gccgccgatg gcggccgctc gcgcctgcgc caggaggccg
     4921 gaatcacgtg ggtcggctgg tcgtatccgc aatcgggcat cgtcgcgacg gtggcgcatg
     4981 agcgcgatca cgagg
//
LOCUS       DATAIQ010001166         1960 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_177614, whole genome shotgun sequence.
ACCESSION   DATAIQ010001166 DATAIQ010000000
VERSION     DATAIQ010001166.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1960)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1960)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1960
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_177614"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(49..819)
                     /locus_tag="VHN20_19305"
     CDS             complement(49..819)
                     /locus_tag="VHN20_19305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007755123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HEX2727977.1"
                     /translation="MTEPAQLSGKAGQGNAPAPISGGAVDRGLLEDLAAASRILVDQG
                     VFDAAGHFSMRHPLHPERFLMSRSLAPALVTADDIMEFDLAGEGCDLRGRNGFIERFI
                     HSEIYRRRPDVMAVAHSHSASVIPFGLTGTPMRAMYHNAAFIAAGVDVFDIREQFGTT
                     DIVINTPEKGGALAKVLGDNSVALLRAHGMVVVGPDIPNTVFRAIFTEVNARLQLQAT
                     MLGGPIAALDRDEGRLADAVNIATVGRSWDLWKRRVTQ"
     gene            898..1641
                     /locus_tag="VHN20_19310"
     CDS             898..1641
                     /locus_tag="VHN20_19310"
                     /inference="COORDINATES: protein motif:HMM:NF012804.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HEX2727978.1"
                     /translation="MNIAVSNPTSRQRLAAQVAATTRLLVMEGILDYSGHVSARVPGQ
                     DAFLIQVRDDSRAELSPERVLLVDLDGKVLEGNGKPPSETVIHTEILRSRPDVQCVLH
                     CHMELAIAFTMMEGVQLMPMRARAVRWESGIPTHPDPSHIKLLDQGRALAKTLGPHHA
                     ALMRAHGLIVVAESVPAMLIDAVHFKENASAQMQAMQAGARPLPLTAAEMVQINRHEM
                     REAHIAKLWNYYVRKGVAAGVLPAEWDLL"
     gene            complement(1728..>1960)
                     /locus_tag="VHN20_19315"
     CDS             complement(1728..>1960)
                     /locus_tag="VHN20_19315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727979.1"
                     /translation="RPVLAPPGVPADRVKALRAAFDAMIKDTAFLDEAKKQNLDIEPV
                     PGEELQQIVAEIAGAPKASIDRLNEIIGPPQQ"
BASE COUNT          310 a          660 c          662 g          328 t
ORIGIN      
        1 gacatgagct tcctcgttga ttgcttatga acctgatcgg gcttcagctt actgcgtcac
       61 ccgccgcttc cacaaatccc acgaccggcc gacggtggcg atgttgaccg cgtcggcgag
      121 gcggccttcg tcccggtcaa gggcggcgat cggcccgccg agcatggtcg cctgcagctg
      181 caggcgggcg ttgacctccg tgaagatcgc ccggaacacg gtgttgggta tgtcgggccc
      241 gaccacgacc atgccgtgcg cccgcagcag ggcgacggag ttgtcgccga ggaccttggc
      301 gagcgccccg cccttctccg gcgtgttgat gacaatgtcg gtcgtgccga attgctcgcg
      361 gatgtcgaac acgtcgacgc ccgccgcgat gaaggcggcg ttgtggtaca tggcccgcat
      421 cggcgtgccg gtgaggccga acgggatcac cgaggccgag tggctgtgcg ccaccgccat
      481 cacgtccggc cgcctgcggt agatctcgct atggatgaag cgctcgatga agccgttgcg
      541 cccgcgcaga tcacagccct cgccggcgag gtcgaattcc atgatgtcgt cggcggtgac
      601 gagcgccggc gccagcgagc gcgacatcag aaagcgctcg ggatggagcg gatggcgcat
      661 cgagaaatgc ccggcggcgt cgaacacgcc ctggtccacc aggatgcggc tcgcggcggc
      721 gaggtcctcg agcaggccgc ggtcgacagc gccgcccgag atcggggcgg gggcgttccc
      781 ctgccccgct ttgcctgata attgggccgg ttcggtcatt ggtcctccgg tgatccgttt
      841 gcctggctgc ttggccagaa tccggttccg cgtctagtcc gaaaggcaac aacgttaatg
      901 aatatcgccg tcagcaaccc gaccagccgc cagcgcctcg cagcccaggt cgccgccacc
      961 acgcgcctcc tggtcatgga aggcatcctc gactacagcg gccacgtttc ggcgcgggtg
     1021 cctgggcagg acgccttcct gatccaggtg cgggatgatt cgcgcgccga actgagcccc
     1081 gaacgcgtgc tgctggtcga tctcgacggc aaggtcctgg agggcaacgg caagccgccg
     1141 tccgagacgg tcatccatac ggagattctg aggtcccggc ccgacgtgca atgcgtgctg
     1201 cactgtcaca tggagctggc gatcgccttc acgatgatgg aaggcgtcca gctcatgccg
     1261 atgcgcgccc gcgccgtgcg ctgggagagc ggcatcccga ctcatcccga cccaagccac
     1321 atcaagctgc tcgatcaggg ccgtgcgctg gccaagaccc tcggcccgca ccatgccgcg
     1381 ctgatgcgcg cgcacggcct catcgtggtc gccgaatccg tgccggccat gctcatcgac
     1441 gcggtgcatt tcaaggagaa cgccagcgcg cagatgcagg ccatgcaggc cggcgccaga
     1501 ccgctgccgc tgacggcggc cgagatggtg cagatcaacc gccacgaaat gcgcgaggcg
     1561 catatcgcca agctctggaa ctactacgtg cgcaagggcg tcgccgccgg cgtcctgccg
     1621 gccgagtggg atttgctgta acgccctccc cgcgagggtg ttcccgactt gcccatttgt
     1681 ggtggccgat ctcgggaaga cccgagatcg gccgggaggg ataggcgtta ttgctgcggc
     1741 gggccgatga tctcgttgag gcggtcgatg ctggctttcg gcgcgccggc gatctcggcg
     1801 acgatctgct gcagctcctc gcccggcacc ggctcgatgt cgagattctg cttcttcgcc
     1861 tcgtcgagga aggccgtgtc cttgatcatg gcgtcgaacg ccgcgcgcag cgccttcacg
     1921 cggtccgccg ggacgcccgg cggcgccagc accggccggc
//
LOCUS       DATAIQ010001167         1892 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_177713, whole genome shotgun sequence.
ACCESSION   DATAIQ010001167 DATAIQ010000000
VERSION     DATAIQ010001167.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1892)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1892)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1892
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_177713"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..447
                     /locus_tag="VHN20_19320"
     CDS             <1..447
                     /locus_tag="VHN20_19320"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX2727980.1"
                     /translation="MVQELEVAARVLGLRLQLAPADGPDGIVSALAAIAKEHADALIV
                     MPSPMLFSQYRRIATIAANSRLPAIGAAREFADFGGLLSYGANLPDLARQTATYVDKI
                     LRGAKPAELPVQQPIKFELVINLKSARELGLSISRELLLVADEVIE"
     gene            444..1421
                     /locus_tag="VHN20_19325"
     CDS             444..1421
                     /locus_tag="VHN20_19325"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX2727981.1"
                     /translation="MRRREVIAALGAAAAWPTRSIAESTRRTVAVLMPYPPTDTEVRE
                     RVAAFREELRRLGWPDETLHVEERWATDNLDRIRANAAELVKMRPDVIFFTGGRVVPI
                     IQRETSSIPTVFAGVSDPLGQGLVPSLARPGGNLTGIALPPFSITAKLVEILKQIAPH
                     VTRAALVFNPANPSTVFHRKEFESAAPAFSLMPSVIPIRNAADIGPAFASFAREPDGG
                     LVFPSDLTMLQHREMVTAVAARHRLPAIYSDRVMAVTGGLASYSADRTDMFRQGAVYV
                     SRILRGEPAGELPVQQPAKFEFVINLKAANALGLPPPPSVLVSADEVIE"
     gene            complement(1677..>1892)
                     /locus_tag="VHN20_19330"
     CDS             complement(1677..>1892)
                     /locus_tag="VHN20_19330"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003602245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HEX2727982.1"
                     /translation="DSSRDRGEPFSFTLGAGQVIAGWDQGVATMKTGGKRTLVIPPNL
                     GYGARGAGGVIPPNATLIFEVELLGAR"
BASE COUNT          331 a          614 c          627 g          320 t
ORIGIN      
        1 atggtccagg agcttgaggt cgccgcgcgg gttttagggt tgcggcttca actcgcgccg
       61 gccgatggcc ccgatggaat cgtcagcgca ttagccgcga tcgcgaagga acacgccgat
      121 gccctgatcg tcatgcccag cccgatgctg ttcagccagt accggcggat cgcaaccatc
      181 gcagcgaaca gcagactacc cgcaatcgga gcggctaggg aattcgcgga tttcggggga
      241 cttctctctt acggggcgaa tttgccagat cttgcccgcc agaccgccac gtacgtcgac
      301 aagatcctga ggggcgcgaa gccggcagag ttaccggtgc agcagccgat caagttcgag
      361 ttggtgatca acttgaagtc agcgagagaa ttgggactgt caatcagccg cgaattacta
      421 ttggtcgccg acgaggtgat cgaatgagac ggcgggaggt catcgctgct ctcggcgccg
      481 ctgccgcgtg gccgacccgt tcgattgcgg agagcacgcg ccggacggtc gcggttctga
      541 tgccgtatcc gccgacggac acggaggtca gggagcgcgt tgccgcgttt cgggaggagc
      601 tgcggcgact ggggtggccc gacgagaccc tccatgtcga ggaacgctgg gcgaccgaca
      661 atctggaccg tatccgggca aacgcggcgg agcttgtaaa gatgcgcccg gatgtcatct
      721 tcttcacggg cggccgggtc gtgccgatca tccagcgtga gaccagctcg atcccgacgg
      781 tgttcgccgg ggtgagcgac ccgttgggcc aggggctcgt gccgagcctc gcgcggcccg
      841 gaggcaacct caccgggatc gccttgcccc ccttttcgat caccgccaag ctcgtcgaga
      901 tcctgaagca gatcgcgccg cacgtgaccc gcgcggcgct tgtcttcaat ccggccaatc
      961 cgtcgaccgt ctttcatcgc aaggaattcg agagcgccgc tccggcgttt tcgctcatgc
     1021 cgagcgtgat cccgatcagg aatgcagccg acatcggacc tgctttcgca tccttcgcgc
     1081 gcgagcccga cggcgggctg gtgtttccgt ccgatctcac catgctgcag caccgcgaga
     1141 tggtgaccgc cgtggcggcc cgtcaccgcc tgcccgcgat ctattccgac cgggtgatgg
     1201 ccgtgaccgg aggcctggct tcgtattcgg ccgacaggac ggacatgttc cggcaaggcg
     1261 cggtgtatgt gagccgcatc ctgcgcggcg agcctgccgg cgagctaccg gttcagcagc
     1321 cggccaagtt cgagttcgtc atcaacctca aggcggccaa cgcactcggc ctgccgccac
     1381 cgccatcggt tctcgtgagc gccgatgagg tgatcgaatg aggctgcagg gaatcccgcg
     1441 cgttgcgtgt ttcaaatgag gcaaagcaga tcggcgggca ccaacgctct cagtggtcga
     1501 agccccgcta cgggcacgcc agagcatgat ccggccaaag cctgcccccg ggcttgaccc
     1561 gggggtggat acgcttcgcc gaaaaagctt gtcccggacc cgaacccggg accatgcggc
     1621 ccaataacaa ggagagcagg atcgattcaa tctgaaccga tcccgcggca gctgcttcag
     1681 cgggcgccga ggagctcgac ctcgaagatc agcgtcgcgt tgggcgggat cacgcccccg
     1741 gcgccgcgcg cgccgtagcc gaggttgggc gggatcacga gggtacgctt gccgcccgtc
     1801 ttcatcgtcg ccacgccctg gtcccagccg gcgatgacct gcccggcgcc gagcgtgaag
     1861 ctgaacggct cgccgcggtc gcgggacgag tc
//
LOCUS       DATAIQ010001168         2616 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_178300, whole genome shotgun sequence.
ACCESSION   DATAIQ010001168 DATAIQ010000000
VERSION     DATAIQ010001168.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2616)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2616)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2616
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_178300"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..276)
                     /locus_tag="VHN20_19335"
     CDS             complement(<1..276)
                     /locus_tag="VHN20_19335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007753006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase"
                     /protein_id="HEX2727983.1"
                     /translation="MALPRLNGIIRALESGQCAFSLFAPPNIETAVELQASKYDGVIF
                     EGEHRPWDIQALRDAMQYLLNRGQIAKAGSVAASVTPTARIPANGVEK"
     gene            complement(314..1354)
                     /locus_tag="VHN20_19340"
     CDS             complement(314..1354)
                     /locus_tag="VHN20_19340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006609602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX2727984.1"
                     /translation="MIIDIHGHYTTEPQALQQFRDKQLAGLADAMRRPTSTDLGITDD
                     MLRQSVQPQIKLQKERGSDLTIFSPRAAGMAHHVGTEETGKVWTTMSNDLIHRVCTLL
                     PDNFVPVGQLPQHPGVSPKNCIPELERIVKELGFVGVNLNPDPSGGYWTDPPLTDRHW
                     YPIYEKLVELDVPAMIHVSSSCNPNFHHTGAHYINADTTAFMQLIQGNLFKDFPSLKF
                     VIPHGGGAVPFHWGRYRGLAQELKKPLLTEHLLNNVFFDTCVYHLPGIDLLTKVIPID
                     NILFASEMLGAVKGVDPETGHNFDDTKRYVDQVQRLSDEDRYKIFEGNARKVYPRLDA
                     LLAKRGKPGRKA"
     gene            1601..2413
                     /locus_tag="VHN20_19345"
     CDS             1601..2413
                     /locus_tag="VHN20_19345"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: protein motif:HMM:NF014593.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003864 - 3-methyl-2-oxobutanoate
                     hydroxymethyltransferase activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HEX2727985.1"
                     /translation="MGSEPVTIPVLQQMKRDGKKSAGVVAWDYQTAQIADRAGVDFIV
                     IGDSVGVNLWGHSNPLEVTLDEILICCKAVRRGTDRALVICDIPFGPLQQGIGEALKA
                     AVRLVKEGGADMVKLDAAAEFPEAVTALTRAGIPVFAQFGLTPQTALKYGVPYSAQNA
                     PNAQATGEMTTRLVDEAKRLEAAGAAMLDFTNSGPVAGPAVVKAVSIPVIGGFGGGPW
                     LDGRVRLAQTALGSSAKWLDSKADTYVNTAKLSLDAFKALIEDVRAGRQIKG"
     gene            2417..>2616
                     /locus_tag="VHN20_19350"
     CDS             2417..>2616
                     /locus_tag="VHN20_19350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727986.1"
                     /translation="MPTATIDGIATRYEVLGSGPPLLMYAPGGFNAALDMWRTQGIYA
                     KVKFLDHLPKSYTCVVFDRRECG"
BASE COUNT          423 a          830 c          901 g          462 t
ORIGIN      
        1 cttctcgaca ccgttcgccg ggatgcgcgc cgtcggcgtg acgctggcgg cgaccgagcc
       61 ggccttggcg atctgcccgc ggttgagcag atactgcatg gcgtcgcgca gggcctggat
      121 gtcccagggc cggtgttcgc cctcgaagat cacgccgtcg tatttcgagg cctgcagctc
      181 gaccgcggtc tcgatgttgg gcggggcgaa cagcgagaac gcgcactggc cggattcgag
      241 ggcgcggatg atgccgttga gacgaggcag ggccatgctg gttattcctt ctttgtcgtg
      301 acgcgggcgg ggttcaggcc ttgcggcccg gcttgcctcg cttggcgagc agcgcatcga
      361 ggcgcggata gaccttgcgg gcattgccct cgaagatctt gtagcggtcc tcgtcgctca
      421 ggcgctgcac ctggtcgacg taccgcttgg tgtcgtcgaa gttgtggccg gtctccgggt
      481 cgacgccctt gaccgcgccg agcatctccg acgcgaacag gatgttgtcg atcgggatca
      541 ccttggtgag cagatcgatg cccggcaggt gatagacgca ggtgtcgaag aagacgttgt
      601 tgagcaggtg ctccgtgagc agcggcttct tcagctcctg tgccaggccg cgatagcggc
      661 cccagtggaa cggcaccgcg ccgccgccgt gcgggatcac gaatttcagc gacgggaaat
      721 ccttgaacag gttgccctgg atcagctgca tgaaggcggt cgtgtcggcg ttgatgtaat
      781 gcgcgccggt gtgatggaag ttcgggttgc acgacgagct gacatggatc atcgccggca
      841 cgtcgagctc gaccagcttc tcgtagatcg ggtaccagtg gcggtcggtc agcggcgggt
      901 cggtccagta gccgccggac ggatccgggt tgagattgac gccgacgaag ccgagctcct
      961 tgacgatgcg ctcgagctcc gggatgcagt tcttcggcga gacgccggga tgttgcggca
     1021 gctgcccgac cggcacgaag ttgtccggca gcagcgtgca cacgcggtgg atgagatcgt
     1081 tgctcatcgt cgtccagacc ttgccagtct cctcggtgcc gacatggtgg gccatgccgg
     1141 cggcacgcgg cgagaagatg gtcaggtcgc tgccgcgctc cttctgcagc ttaatctgcg
     1201 gctgcacgct ctggcgcagc atgtcgtcgg tgatgccgag atcggtggat gtcggccggc
     1261 gcatcgcgtc ggcgagcccg gccagctgct tgtcgcggaa ctgctgcagc gcctgcggct
     1321 cggtcgtgta gtggccgtgg atgtcaatga tcatgggcgg acaatctcct tgagcgcggg
     1381 cagcatcgca ggtgggttgc ggcagcattg acaacaaaga actcggctgt gcaagagtgc
     1441 cgccgccggg agccgcccgg cccgtcccgg caggttttcg gaacgccgca cccgcttcag
     1501 cgtgccgcct ccaagagcct gcaaaagttc agatctgcag gtttacgcgg tccggaatcg
     1561 gtccaatccg cgtcaccctg ctcagcagcg aggcgttatc atggggtccg agccggtcac
     1621 cattcccgtg cttcagcaga tgaagcgcga cggcaagaaa agcgccgggg tggtggcctg
     1681 ggactaccag acggcccaga tcgccgaccg ggcgggcgtt gacttcatcg tcatcggcga
     1741 ctcggtcggg gtcaatctgt ggggccactc caatcccctg gaggtgacgc tcgatgagat
     1801 cctcatctgc tgcaaggcag tccgccgcgg cacggaccgc gccctggtca tctgcgacat
     1861 tcctttcggg cccctgcagc agggcatcgg cgaggccctg aaggcggccg tgcggctggt
     1921 caaggaaggc ggcgccgaca tggtcaagct cgacgccgcg gccgaattcc cggaggcggt
     1981 caccgccctc acccgcgccg gcatcccggt cttcgcgcaa ttcggactga cgccgcagac
     2041 ggcgctcaaa tacggcgtgc cctacagcgc ccagaacgcg cccaatgccc aggctactgg
     2101 agagatgacg acgaggctcg tcgacgaggc caagcgcctg gaagccgccg gcgccgccat
     2161 gctcgacttc accaattccg ggccggtcgc cggaccggcg gtggtcaagg cggtgtcgat
     2221 cccggtgatc ggcggcttcg gcggcgggcc gtggctcgac ggtcgcgtgc gcctggcgca
     2281 gaccgccctc ggctcctcgg cgaagtggct cgattccaag gccgacacct acgtcaacac
     2341 ggcgaagctc agcctcgatg cattcaaggc gctgatcgag gacgtgcgcg ccggccgtca
     2401 gatcaagggc taagccatgc cgaccgcaac catcgacggc attgccacgc gctacgaggt
     2461 tctcggctcg ggcccgccgc tgctgatgta tgcgcccggc ggcttcaacg ccgcgctcga
     2521 catgtggcga acgcagggca tttacgccaa ggtcaagttt ctcgaccacc tgcccaagag
     2581 ctacacctgc gtcgtgttcg accggcgcga atgcgg
//
LOCUS       DATAIQ010001169         2632 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_84577, whole genome shotgun sequence.
ACCESSION   DATAIQ010001169 DATAIQ010000000
VERSION     DATAIQ010001169.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2632)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2632)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2632
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_84577"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1..360
                     /locus_tag="VHN20_19355"
                     /pseudo
     CDS             1..360
                     /locus_tag="VHN20_19355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011607949.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(606..2576)
                     /locus_tag="VHN20_19360"
     CDS             complement(606..2576)
                     /locus_tag="VHN20_19360"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX2727987.1"
                     /translation="MPSKSLLTLSRQVGLLAVAGVSGVLIMAGVNVVSTQRIQTAQSA
                     LEQATDLRKQALGLDRDLLQARRHEKDFFLRMDEKYAKEHAATEKRIDTELAAIGTGA
                     AALGMDELKSNADQVGAGLKKYAALFAEAVTTAKKIGLTEESGLQAALIASGRALEAG
                     LASADAMPLLVQAVNMRRQEKNFALRLDEKSVADMKKSVAAFEATLAASSLSAGTRNE
                     TAALLAAYQRDFAAYVQMRLKLVDIGKQLSKAYADVEPLIRDLVGGLGDQREATKTRI
                     AADQSFAQTIALLVSGLALLVMAAAGFVIGRSITRSLAAMTAYMGVLASGDTSREVPG
                     RGRGDEIGAMASAVQVFKDALIAKREADEAAKLDADAKMRRAEILDTLTKRFEANVSA
                     LTQGLSSAATEMEATAETMSATAQQTTNQSVSVASAAEQTSANVQTVAVATEELSSSI
                     REIAQQVAKSSSIAGRAAEEARHTNATVQMLAGGAQKIGEVVALISNIAGQTNLLALN
                     ATIEAARAGEAGRGFAVVAAEVKELANQTAKATEEIAAQIAAIQEETRTAVGAIQTIG
                     STIDEMNAIAAGVAAAMEEQGAATSEIARNVQQAAQGTQVVTGSILDVKRGAGETGSA
                     ASQVLSAAQELARHSEDLGREVDSFLSGVKAA"
BASE COUNT          369 a          909 c          854 g          500 t
ORIGIN      
        1 ctcgcatacc ggtggttctg cgggctcggg cttgaggatg ccgtgcccga tcattccacc
       61 ttctccaaga tccggcacgg tcgcttccgc gacagcgacc tgctgcgccg gctgttcgag
      121 acaacagtga agcgctgcat cgacgagggc ttggtcggcg gagatggctt tgccgtggat
      181 gccagcctga tccgtgccga ggcgaaccgg cagcgcttcc atccgggcga gcagggcctg
      241 ccgcctggct tggcgagccg ggctatcgac gagtacttcg ccgtcctcga cgacgcggtc
      301 ttcggcgccg cgacacccgt cgtgccctcg cgcatgtcgc cgaccgaccc ggccgcgcgc
      361 tgcttggcct cgcgcgccgc gcggctggca atcgacgacg acttggtgac ctgctcggcg
      421 atctcgcgga tcgtggatga cagctcctcg gacaagcgcc ctgttgcgcg atgcgatgcc
      481 actttcctgt ggtgtccagg aggtcaccaa cggtgtccag gaggtcacca acgatcagat
      541 cggcgtggca tcctcgacaa aaacacatgc tttccgtaac tggagatcct ttatccgggt
      601 cagggtcagg cggctttgac gccggacagg aagctgtcga cctcgcggcc gagatcctcc
      661 gagtggcgcg ccagctcctg cgcggcgctc agcacctgcg aggccgccga acccgtctcg
      721 cccgcgcccc gcttcacgtc gaggatgctg ccggtcacca cctgcgtgcc ctgcgcggcc
      781 tgctgcacat tgcgggcgat ctcgctcgtc gcggcgccct gctcctccat ggccgcagcg
      841 acaccggctg cgatcgcgtt catctcatcg atggtggagc cgatcgtttg gatggcgccc
      901 accgccgtcc gcgtctcctc ctggatggcg gcgatctgcg cggcgatctc ctccgtcgcc
      961 ttggcggtct ggttggcgag ctccttcacc tcggccgcga ccaccgcgaa gccgcgccct
     1021 gcctcgccgg cgcgcgccgc ctcgatggtg gcgttgagcg cgagcagatt ggtctggccg
     1081 gcgatgttgc tgatcagcgc aaccacctcg ccgattttct gcgcaccgcc cgcgagcatc
     1141 tggacggtcg cgttggtgtg cctggcttcc tcagccgcgc ggccggcgat ggacgaggac
     1201 ttggccacct gctgggcgat ctcgcggatc gacgacgaca gctcctccgt tgcgaccgcc
     1261 accgtctgca cattggccga cgtctgctct gccgcgctcg ccacgctcac cgactggttc
     1321 gtggtctgct gagccgtggc gctcatcgtc tcggccgtcg cttccatctc ggtggcggcg
     1381 gacgagagcc cctgcgtcag ggccgaaacg ttcgcctcga aacgcttcgt gagagtgtcg
     1441 agtatttcgg cgcggcgcat cttggcatcg gcgtccagct tcgccgcctc gtccgcctct
     1501 ctcttggcaa tgagagcatc cttgaagacc tgaacggcgc tggccatggc gccgatctcg
     1561 tctccgcggc cacgcccggg cacctcgcgg ctcgtgtcgc cactggcaag gacgcccatg
     1621 taggcagtca tcgccgcgag tgagcgagtg atgctacggc cgataacaaa gccggcagcc
     1681 gccatcacca gcaaagcgag cccggacacg agcagagcga tggtttgtgc gaatgactgg
     1741 tcggcagcga tccgggtttt ggtcgcctca cgctggtcgc cgaggccgcc caccaggtcc
     1801 ctgatcagcg gctcgacgtc ggcataggct ttcgacagct gcttgccgat gtcgacgagt
     1861 ttcaagcgca tctgcacata cgccgcgaag tcgcgctggt aggcggcgag cagggcggcc
     1921 gtttcgttac gcgtcccggc agacagcgac gacgccgcca gcgtggcttc gaacgcggcg
     1981 acgctcttct tcatgtcggc gacggacttc tcgtcgagcc gcagggcgaa gttcttttcc
     2041 tggcgccgca tgttcacggc ctgcacgagg aggggcatcg cgtcggcgct cgcgaggccc
     2101 gcctcgagcg cccggcctga tgcgatcagc gcggcctgca ggcccgattc ctccgtaagt
     2161 ccgatcttct tggccgtcgt gacggcctcc gcaaacaagg cggcatactt cttgaggcct
     2221 gccccgacct ggtcggcgtt tgatttcagc tcgtccatgc cgagagccgc cgcccccgtg
     2281 ccgatagcgg cgagctccgt gtcgattcgc ttttcggtcg cggcgtgctc cttcgcgtat
     2341 ttttcgtcca tacgcaggaa gaagtccttc tcgtgccgcc gcgcctggag gaggtcacgg
     2401 tcgaggccga gcgcctgctt gcgcaggtca gtcgcttgct ccagggccga ttgcgcagtt
     2461 tggatgcgct gcgtgctgac gacgttcacc ccggccatga tgaggacgcc tgagactccg
     2521 gccacggcga gcaggccgac ctggcggctg agcgttagaa gcgacttgga cggcattctt
     2581 ttccctcact ttaggcgcgc tgaatgtgcg gtcggtcgga cgcacgcgca tc
//
LOCUS       DATAIQ010001170         1911 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_85097, whole genome shotgun sequence.
ACCESSION   DATAIQ010001170 DATAIQ010000000
VERSION     DATAIQ010001170.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1911)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1911)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1911
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_85097"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            89..721
                     /locus_tag="VHN20_19365"
     CDS             89..721
                     /locus_tag="VHN20_19365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727988.1"
                     /translation="MIALALALAAPAPMGAIEAERAFVADAQTLGQWTAFRKYAAPGA
                     LMFVPQPVNAQRFLAGRKDPPVAVFWWPGRSYVSCDGTTAINTGPWVRGFGKSVGYFT
                     TVWLRLPDGSWKWIYDGGDELKFARDEGGDIKPVIAACGKRPPAPAVPVPPASFRQPL
                     DKGSGTSPDRSLVWSWVVDSAGARRFVAQLWDGKAWQPVIDDKIEAPPRR"
     gene            718..1353
                     /locus_tag="VHN20_19370"
     CDS             718..1353
                     /locus_tag="VHN20_19370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarC family protein"
                     /protein_id="HEX2727989.1"
                     /translation="MIELFSTAFITLAVIVDPPGCAPIFASLTRGAGAVERRRMAVRS
                     CAVAWSILMFFALFGEALLSHLGVSLSAFRLAGGIMLFMIALDMVFERRTERREKRAE
                     EIEGTPEAEDVSVFPMAIPMIAGPGSIASVMLLNARAEGIQQSLVVLAAMTAVIVLTL
                     VSLLAAGPLMRFVGAKVEAMITRILGVILAALATQFVLDGLERSLPGLAGA"
     gene            complement(1330..>1911)
                     /locus_tag="VHN20_19375"
     CDS             complement(1330..>1911)
                     /locus_tag="VHN20_19375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727990.1"
                     /translation="ALVVLAAPLLYNSRFLLVRTLGTALLVLLALGGLVPLVLDKVAP
                     EPVRNEWQRAVALANNRCPSLWAMRPIAKLPPATIFTFGDLAPRLIAVTHHRAIIGPY
                     HRNGEQIVDAMNFFRGSADEARALIAKYHADYVLICPMMSQATVFTSEAPDGFYGKLA
                     SGKAPAWLEPVPLPKNSPLMLWRVKPSGPGQPG"
BASE COUNT          282 a          622 c          709 g          298 t
ORIGIN      
        1 gggtggggcc gatgaccatc gccatgttac tgaggaacac gctcaccgcg gcccaccgcc
       61 gcgagggact ggaggagccg cgcctgtgat gatcgccctt gcccttgccc ttgccgcacc
      121 cgccccgatg ggcgcgatcg aagcggaacg cgccttcgtg gccgacgcgc agacgctcgg
      181 ccagtggacc gccttccgca aatatgcagc gcccggcgcg ctgatgttcg tgccgcagcc
      241 ggtcaacgca cagcgtttcc tggccgggcg aaaggacccg ccggtcgcgg tgttctggtg
      301 gccgggacga agctacgtca gctgcgacgg aacgaccgcg atcaacaccg ggccgtgggt
      361 gcgggggttc ggcaagtcgg tcggatattt caccaccgtg tggctgcgcc ttcccgacgg
      421 cagctggaag tggatctacg acggcggcga cgagctgaag ttcgcgcgcg acgagggcgg
      481 cgacatcaag ccggtgatcg cggcctgcgg caagcggccg cccgccccgg ccgtgcccgt
      541 gcctcccgcg tcgttccgcc agcccctcga caagggcagc gggaccagcc cggaccgcag
      601 cctggtgtgg agctgggtgg tcgattcggc cggagcgcgc cgtttcgtcg cgcaattgtg
      661 ggacggcaag gcgtggcagc cggtgatcga cgacaagatc gaggcgccgc cgcgccgatg
      721 atcgagctgt tcagcaccgc cttcatcacc ctcgcggtga tcgtcgaccc gccgggctgc
      781 gcgccgatct tcgcttcgct gacgcgcggc gcgggcgccg tggaacggcg gcggatggcg
      841 gtgcgatcct gcgcggtcgc ctggtcgatc ctgatgttct tcgccttgtt cggagaggcg
      901 ctgctgagcc acctcggagt gtcgctctcc gcctttcggc tggctggcgg gatcatgctg
      961 ttcatgatcg cgctagacat ggtgttcgag cggcgcaccg agcggcgcga gaagcgcgcg
     1021 gaggagatcg agggcacgcc cgaggccgag gacgtcagcg tcttcccgat ggcgatcccg
     1081 atgatcgccg ggccgggctc gatcgcctct gtgatgctgt tgaacgcccg cgccgagggg
     1141 atccagcaat cgctggtcgt gctggcggcg atgaccgcgg tgatcgtgct gaccctggtg
     1201 tcgctgctgg cggccgggcc gctgatgcgc ttcgtcggcg ccaaggtgga ggcgatgatc
     1261 acgcgcatcc taggcgtgat cctggccgcg ctggcgacgc agttcgtgct cgacgggctg
     1321 gagcggtcgc tacccgggct ggccggggcc tgacggcttc acccgccaca gcatcagcgg
     1381 cgaattcttc ggcagcggca ccggctccag ccaggcgggc gccttgcccg acgcgagctt
     1441 gccgtagaag ccgtccggcg cttccgacgt gaacaccgtc gcctggctca tcatcgggca
     1501 gatgaggacg taatcggcat ggtatttggc gataagcgcc cgggcctcat cggccgagcc
     1561 gcggaagaag ttcatcgcgt cgacgatctg ctcgccgttg cggtggtagg ggccgatgat
     1621 cgcgcggtgg tgggtgacgg cgatcaaccg cggcgcgagg tcgccgaagg tgaaaatcgt
     1681 tgccggcgga agcttggcga tcggccgcat cgcccacagc gatgggcagc ggttgttggc
     1741 gagggcgacc gcgcgctgcc actcgttgcg gaccggctcc ggcgcgacct tgtcgagcac
     1801 gagcgggacg aggccgccga gggcgagcag caccagcaga gcggtgccga gggtccgcac
     1861 gaggaggaag cgcgaattgt agagcagcgg cgcggccagc acgaccagag c
//
LOCUS       DATAIQ010001171         2172 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_85319, whole genome shotgun sequence.
ACCESSION   DATAIQ010001171 DATAIQ010000000
VERSION     DATAIQ010001171.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2172)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2172)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2172
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_85319"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..651
                     /locus_tag="VHN20_19380"
     CDS             <1..651
                     /locus_tag="VHN20_19380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008965145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stage II sporulation protein M"
                     /protein_id="HEX2727991.1"
                     /translation="ALLAILAGVAAGYLLSKDDEAWFSALVPGELAGGRGRASTRESL
                     LETEIFAPWPGFAQSFVVFANFLFRHNTVVGLMTFGLGVVGGVPTLMLLVYQGLGFGA
                     FIALHANRGLTTDFLGWVAIHGVTEFGAIILCGAGGLVIARGVLFPGPAARLDNVAVV
                     GRTAARLVVGAVAMFFIAGLIEGGLRQLIASTPARFAFAAATLALWLAYFLRAGWR"
     gene            648..1532
                     /locus_tag="VHN20_19385"
     CDS             648..1532
                     /locus_tag="VHN20_19385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008965146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HEX2727992.1"
                     /translation="MTALHEVQDRVGRLFGAAHRNRRMILTPEGIELPVELAEPGERL
                     VAFTLDLFIWLCATIVLYFSIVALLLAGVAGSIAITLILFIAFIVRNLYFIYFEILWR
                     GATPGKRICGLRVIDRRGGPTESGAIVARNLTREVEVFLPLGLLLSAGAGGTFEKLSI
                     TAWLVLFAALPLFNRDRLRSGDLIAGTMVVAVPKALLLGELGSAPTAYTFSARQLGVY
                     GAFELQVLEELLRRPSNAETDGLLENVCGRIARRIGWTDAVAPADVRPFLNAFYAAER
                     AQLERDRLFGKVRADKHG"
     gene            complement(1623..>2172)
                     /locus_tag="VHN20_19390"
     CDS             complement(1623..>2172)
                     /locus_tag="VHN20_19390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727993.1"
                     /translation="LGAAGVLLGLVCGMLASAAVTYGVVQELRGRSFTFAESLSVALR
                     RFLPLLGVAFCIGFMGMIAMILLVIPVFFVICVYYVAPQACVVERTGISASLSRSSAL
                     TKGHRWQIFGIVVVIFLINAVVSYVLGLIVPGSGTLATVVTGAWQAVTGAFNAVLAGV
                     LYFQLRSVKEGFELDQIASVFD"
BASE COUNT          329 a          732 c          747 g          364 t
ORIGIN      
        1 gcactcctcg ccatcctggc cggcgtcgcc gcaggctacc tgttgtcgaa agacgacgaa
       61 gcctggttct cggccctggt ccccggcgaa ctcgccggcg ggcgcggccg cgccagcacc
      121 cgcgagagcc tgctggaaac cgagatcttc gcgccgtggc cgggcttcgc ccagtcgttc
      181 gtcgtcttcg ccaacttcct gttccggcac aacaccgtcg tcgggctcat gaccttcggg
      241 ctgggcgtcg tcggcggcgt gccgacgctg atgctgctcg tctatcaggg cttgggcttc
      301 ggcgcgttca tcgcgctgca cgccaaccgc ggtctcacga ccgattttct gggctgggtc
      361 gccattcacg gcgtgacgga gttcggcgcc atcatcctgt gcggggcggg cgggctggtg
      421 atcgccagag gcgtgctgtt tcccggcccc gccgcgcgcc tcgacaacgt ggcggtggtc
      481 ggccggacgg cggcgcgcct cgtcgtcggg gcggttgcca tgttcttcat cgccgggctg
      541 atcgaaggtg ggctgcgcca gctcatcgca tcgacgccgg cccgcttcgc attcgcggcg
      601 gcgacccttg ccctgtggct ggcttacttt ctccgggcag gctggcgatg accgctttgc
      661 acgaggtgca ggacagggtc ggccgcctgt tcggcgcggc gcatcgcaat cggcgcatga
      721 tcctcacccc ggagggcatc gaactgccgg tcgagctggc cgagcccggc gagcggctgg
      781 tcgcattcac gctcgacctg ttcatctggc tctgcgccac gatcgtgctt tactttagca
      841 tcgtggcgct gctgctggcg ggggttgccg gctcgatcgc gatcacgctg atcctgttca
      901 tcgcgttcat cgtccgcaac ctctacttca tctatttcga gatcctgtgg cgtggcgcga
      961 cgcccggcaa gcgcatctgc ggcctgcgcg tgatcgacag gcgcggcggg ccgaccgaga
     1021 gcggcgccat cgtggcgcgc aacctgaccc gcgaggtcga ggtcttcctg ccgctcgggc
     1081 tgttactgtc cgcgggcgcc ggagggacgt tcgagaagct gtcgatcacg gcgtggctcg
     1141 tcctgttcgc cgcactgccg ctcttcaacc gcgaccggct gcgcagcggc gacctgattg
     1201 ccggcaccat ggtcgtcgcc gtgcccaagg cgcttctcct cggcgaattg ggcagcgcgc
     1261 caaccgccta tacgttctcg gcgcgccagc tcggggtcta cggcgccttc gagctgcagg
     1321 ttctcgagga actgctgcgc cgcccgtcca acgcggagac cgacggcctc ctggagaatg
     1381 tgtgcgggcg gatcgccagg cgcatcggct ggaccgacgc ggtcgcgccg gcggacgtgc
     1441 gcccgttcct caacgcgttc tacgcggccg agcgcgcgca gctggagcgc gaccgcctgt
     1501 tcggcaaggt ccgcgccgac aagcacggct gatgcgagat ccgcgctgag cgcgacacgc
     1561 ggtcgatcat gccgagccgt cggatcaatt cgacttgagg cgatccggct gcaaagcccg
     1621 gctcagtcga agacgctggc gatctgatcg agctcgaagc cttccttgac ggagcggagc
     1681 tggaagtaaa gcacgccggc gagaacggcg ttgaaggcgc cggtgacggc ctgccacgcg
     1741 ccggtgacca ccgttgccag cgttccggag ccgggcacga tcagtccgag gacgtagctg
     1801 accacggcat tgatgaggaa tatcacgacg acgatgccga agatctgcca gcggtggcct
     1861 ttggtaaggg cggagctgcg ggagaggctg gccgatatgc ccgtccgttc gacgacgcaa
     1921 gcttgcggcg ccacgtagta gacgcagatc acgaagaaga ccgggatgac gagcaggatc
     1981 atggcgatca tgcccatgaa gccgatgcag aaggcaacgc cgagcagcgg caggaaccgc
     2041 cgcagggcga ccgacagcga ctccgcgaag gtgaacgagc gaccgcgcaa ctcctgcacc
     2101 acgccataag tcaccgcggc gctcgccagc atgccgcaaa cgaggccgag gaggacgccg
     2161 gcggcgccca gg
//
LOCUS       DATAIQ010001172         3219 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_180310, whole genome shotgun sequence.
ACCESSION   DATAIQ010001172 DATAIQ010000000
VERSION     DATAIQ010001172.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3219)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3219)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3219
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_180310"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            238..1338
                     /locus_tag="VHN20_19395"
     CDS             238..1338
                     /locus_tag="VHN20_19395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEX2727994.1"
                     /translation="MRAVRPDQADSAPDQDVVTEPSYVEKALGLVLLLVLAVGCILVL
                     SPFLSAILLAIPLCVSTWPLFGRVQQVLDGRRTAAALLTTLIIAAVLVAPLVVLGMNL
                     ADDIARLNIAVHSAIERGLPPPPWLENVPMVGAEAKRLWLQISQGRAELRATLAPYLG
                     PIRTWALQQGASLLGGTLQVALSVFLLFFLYRDGAYAEARLKEAMSRLGGWRARHVLE
                     EGGGTIRSVVNGVVGTAVIQGILLGVSFWIAGIPGAIVLGALAVILTLMPLGLVVLWL
                     PAALWLLSQDQTGWAIFVFAWNGLFVGMLDNLLRPYLISRGAKLPTVLIFFGVLGGVL
                     TFGVVGVFLGPVLLAVAYRLFQDWGAGGEGET"
     gene            1365..2312
                     /locus_tag="VHN20_19400"
     CDS             1365..2312
                     /locus_tag="VHN20_19400"
                     /inference="COORDINATES: protein motif:HMM:NF025606.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4344 domain-containing metallopeptidase"
                     /protein_id="HEX2727995.1"
                     /translation="MALRLTLSHLMRRKMGPSASRIRDIPARCARLRSSVMRCNSIMM
                     RQTGLGALLAGSLFTPVDAQSASAPARPDRIVVEYVDPTNPAHAPLRDLLKANQALER
                     VRDRLALVRWPRTLRLELKGCDGEANAWYGDAIVTVCYEYLEDMWRSANSSQRPAAIS
                     REDAFLGPMMDVFLHEAGHALFDILGIPLLGREEDAADQLAAYYMLQFPREVRRGLVL
                     GAAYNYASSMKVRSARDLSRRRLEVGRHITYADEHGTPAQRLYNLLCIAYGSDKELFA
                     DIVDKGFLPEDRAEICPDEYRQIDHAYRALIAPHVDPGQ"
     gene            complement(2323..>3219)
                     /locus_tag="VHN20_19405"
     CDS             complement(2323..>3219)
                     /locus_tag="VHN20_19405"
                     /inference="COORDINATES: protein motif:HMM:NF024039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator
                     ligand-binding domain-containing protein"
                     /protein_id="HEX2727996.1"
                     /translation="KVARALGRDRLGLELAQDFDLRMIGMLYYVAVSSDTLVEALRRL
                     ERFSAVANEALVFQCSAPADLEIRLDYAGVARHSDRHQVEFLLAALVRMCRSITGIAL
                     RPVSVAIAHSRSDDFGEYAAFFGCAPTFKAAYDAVVFQEACRALPVVGADSYLSDLLV
                     RYCEETLSARMTVRSSLRAQVENAVAPLLPHGRPRARVIAEKLRMSPRTLARRLADEG
                     LTFASLMEDMRRTLAARYLQDPKLSISQIAWLLGYAEVGAFTHAFRRWTGQAPSVMRR
                     SQPAGARVPPKPPRRLSQQARA"
BASE COUNT          533 a         1005 c         1075 g          606 t
ORIGIN      
        1 gcggacgcgc agggagtcgc ggacgaactc gtgcgggtct tgcgaaggac atgcggagag
       61 cggggctgcg tggccgttcg catagcgatt ccgcccaaag gctcgacgga ccgaaacctg
      121 ctccgctctg gtgagaacgg cgacgatcag gcggtctatt tcgtgccggg ttgaagcgat
      181 cggcatctac gcagctcggg tgagccccgc gcatgtgatt ggaaggatcg gcacgacatg
      241 cgggctgttc gtcctgacca ggcggattct gcaccagatc aggacgtcgt cacagagccg
      301 tcctatgtcg agaaggcgct cggcctcgtg ctgttgctcg tactcgccgt cggttgcatc
      361 cttgtactct ctccctttct cagcgcgatc ctactcgcga ttccgttgtg cgtgtcgaca
      421 tggccgctgt tcgggcgcgt gcagcaggtg ctcgatggcc ggcgaaccgc cgctgcgctg
      481 ctgacgaccc ttattatcgc tgccgtcctc gtcgctccgc tggttgtgct cgggatgaat
      541 ctcgccgacg acatagcgcg cctcaacatc gcggttcact ccgccatcga acgtgggctt
      601 ccgccgccgc catggctcga gaacgtgccg atggtcggcg cggaggcgaa gcgactttgg
      661 ctgcaaatct cgcaaggccg cgcggaatta cgggccacgc ttgccccgta cctcgggccg
      721 atccggacct gggcgctgca gcaaggcgcc tcgcttctcg gcggcaccct gcaagtggcg
      781 ctgagcgtct tcctgctgtt ctttctgtat cgggacggcg cctatgcgga ggctcgattg
      841 aaggaagcga tgtcgcggct tgggggctgg cgggcgcggc acgtgctgga ggaaggcgga
      901 gggaccatca gaagtgttgt caacggcgtc gtcggcacgg ctgtgatcca gggcatcctg
      961 ctcggcgtga gcttctggat cgccggcatt cccggtgcca tcgtgctcgg agcccttgcc
     1021 gtcattctca ccctgatgcc gttggggctc gtcgtgcttt ggctgccagc tgcgctctgg
     1081 ctcctgtcgc aggatcagac cggctgggca atcttcgtat tcgcctggaa cgggctcttc
     1141 gtgggtatgc tcgacaacct gctacgtcct tacctgataa gccggggtgc caagctgccg
     1201 accgtgctga tcttcttcgg ggtgctcggc ggcgttctca ccttcggggt tgtcggcgtt
     1261 ttcctcggcc cggtcctgct ggccgtcgcc tacaggctgt ttcaggattg gggagcgggc
     1321 ggcgagggcg aaacctgaac gttgcacgcg attgacaaaa cgcattggcg cttcggctca
     1381 cattgtctca cctgatgcga cgcaagatgg gcccttcggc atctcgtatt cgagacatcc
     1441 cggcgcggtg cgcgcgcctg cggagttcgg tcatgcggtg caattcgatc atgatgcggc
     1501 agactggact cggcgccttg ttggcggggt ccctgttcac ccccgttgac gcccaatcgg
     1561 cgtcggcgcc ggcgcgaccc gacaggatcg tcgtcgaata cgtcgacccg acgaatcctg
     1621 cgcacgcacc gctccgcgat cttctcaagg ccaatcaggc gctcgagcgg gtgcgcgacc
     1681 gtctcgcttt ggtgcgctgg ccacgcacgc tgcggctcga gctcaagggg tgcgacgggg
     1741 aggcgaacgc atggtacggg gatgctatcg tcaccgtgtg ctacgagtat ctggaggaca
     1801 tgtggaggag cgccaactcg tcgcagcgcc ctgcggccat ctcgcgagaa gacgcgttcc
     1861 tggggccgat gatggacgtc tttctccacg aggccggcca cgccctgttc gacatcctcg
     1921 gcattccgct gctcgggcgg gaggaggacg cggccgacca gcttgcagcc tactacatgc
     1981 tgcaattccc gagagaggtg agacgtgggc tggtcttggg cgcggcctac aattacgcaa
     2041 gctcgatgaa ggtacgcagt gcccgtgatc tgtccaggcg caggctcgag gtcggccgcc
     2101 acatcacgta tgccgacgaa cacggcacac ccgcgcaacg cttgtacaac ctgctgtgca
     2161 ttgcctatgg ctcggacaag gagttgttcg ccgacatcgt cgataaggga tttctgcccg
     2221 aagatcgcgc agagatctgc ccggacgaat atcggcagat cgatcatgcc tatcgcgcgc
     2281 tgatcgctcc gcatgtcgat cccggccaat aggggggccg ctctacgcgc gggcttgctg
     2341 agaaagcctt cgcggcggtt ttggcggtac cctggccccg gcaggttgcg agcggcgcat
     2401 caccgatggc gcttggccgg tccagcggcg gaaagcatgg gtgaaggcgc caacctccgc
     2461 atagccgagc agccaggcga tttgcgagat cgagagcttg ggatcctgga gatagcgcgc
     2521 ggcgagcgtc ctgcgcatgt cctccatgag cgacgcgaag gtcaatcctt cgtcggcgag
     2581 gcgccgcgcc agcgtgcgcg ggctcatgcg cagtttctcg gcgatgaccc gtgctcgcgg
     2641 cctgccgtgg ggaaggagtg gtgcgacagc gttctcgacc tgcgcgcgca acgagctcct
     2701 gacggtcatc cgcgccgaca gcgtctcctc gcagtagcgc acgagaaggt cgctcagata
     2761 cgaatcagcc ccgaccacgg gtaaggcgcg gcacgcctcc tggaaaacga cggcgtcgta
     2821 ggcggctttg aatgtcggcg cgcagccgaa gaacgcggcg tattcaccaa aatcgtcaga
     2881 ccgggaatgg gcgatggcga cgctcacggg cctcagcgcg ataccggtga tcgacctgca
     2941 catgcgcacc aaggcggcga gaaggaattc gacctggtgc cgatcggagt ggcgcgcaac
     3001 tccggcatag tcgagccgaa tttccagatc ggcgggggca ctgcattgaa aaacgagcgc
     3061 ctcgttggcg accgcgctga agcgctccag tcgccgcagc gcctcgacaa gcgtatcgga
     3121 tgagacggcg acgtaataga gcattccgat catgcgcagg tcgaaatcct gcgccagctc
     3181 caggccgagc cggtcacgcc cgagggcgcg cgccacttt
//
LOCUS       DATAIQ010001173         3687 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_180324, whole genome shotgun sequence.
ACCESSION   DATAIQ010001173 DATAIQ010000000
VERSION     DATAIQ010001173.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3687)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3687)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3687
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_180324"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            62..1243
                     /locus_tag="VHN20_19410"
     CDS             62..1243
                     /locus_tag="VHN20_19410"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-hydroxy acid oxidase"
                     /protein_id="HEX2727997.1"
                     /translation="MRGLRGCYNIADLREAGRRGLPRGIFEYVDRGTEDEVALAHNRA
                     AFERIKMRNRVLVDVSRIDLSTTLLGKPVKLPLAIAPTGIAGLCWHEGELELAKAAAA
                     AGIPFTLATGSNTSMEKVAREAGGRLWFQLYMWEKRELSLELVARARDAGFEALILTV
                     DPALGANREYNQRNGFSQPFRITPRNVADVMLHAGWLSGVLLRYLAQGGMPRHENYPK
                     EYRLRITDDAGAKKDLRAHSMNWSDVDRLRQAWPGKLILKGILHPEDALRAVASGVNG
                     IVVSNHGGRNMDSAAATIDVLPEIVEAVGERTTVMLDSGIRRGSDIVKALALGAKAVL
                     VGRATLYGVMVGGQAGAEHALSILQTELKRTMAYVACRSIAEVNAHVLAPRTRTASGT
                     M"
     gene            1258..2283
                     /locus_tag="VHN20_19415"
     CDS             1258..2283
                     /locus_tag="VHN20_19415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2727998.1"
                     /translation="MTMLERLTPKAITVGAVLLAGISATRAEPVADFYRGKTVNVLIG
                     VAPGGEYDLHARLVARYIGKYIPGNPTVVPQNMTGGGGLRMANYLYEVAPKDGTAIGM
                     IANTFPAMQAVGIGGIRFDAAKLNWIGSISPTVETMAVWKTAGVTTLEETRAKEVVAG
                     ATGRGAITYMLPAMLNDVLGTKFKIVTGYPGGNDVNLAMERGEVGARNNTWSSWKVTK
                     PDWLRNKDITILVQAGPRAADLPGVPSVEDLVKSDDERQLVNLIVSGTRLGRPLATTP
                     GVPAERVQALRAAFDAVMKDAGFLKEAAAANVEVDPVRGDDMQKVVDEVLATPKHVRD
                     RARPIFE"
     gene            2375..3442
                     /locus_tag="VHN20_19420"
     CDS             2375..3442
                     /locus_tag="VHN20_19420"
                     /inference="COORDINATES: protein motif:HMM:NF012607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX2727999.1"
                     /translation="MSKPKILIFAPREEPLEIRRRLEEAGCAIAVGDRAWQVPREDHE
                     GELVSAARDAVALMGTSIRHTPISRRVMEASQRLRIIAKYTVGVDDIDVDAATDLGIL
                     VCHSPTESNCFGVAETTMAMMLAILKKVRERDADVRAGKWREPHHATTFIASRFSDDH
                     PGVTVGLVGLGRIGTRVAQLLAPWRVRILAYDPYIEPSRFLLAGARQVDYETLLRESD
                     VVSFHVVLTSETRYMLSEAQIGLMKPSAVVINTARGKVVDEAALARALEAGHLRGAGI
                     DAFEEEPLPADSPLRRLGDKVLLSPHSAAFNEGGELRPGIVWATRSVLTALSGQVPDN
                     VYNKAVIPRWKERFGDAAVTG"
BASE COUNT          657 a         1214 c         1266 g          550 t
ORIGIN      
        1 tgcacatgcc cggcgcgccc ggttatgcgg gggcaatgat ccacaacgag gaacgggtga
       61 ggtgagggga cttcgaggct gctacaacat cgccgacttg cgggaggcgg gacgccgcgg
      121 gcttcccagg ggaatcttcg aatacgtcga ccgcggcacc gaggacgagg ttgcgctcgc
      181 ccacaaccgg gccgccttcg agcgcatcaa gatgcgcaac cgcgtgctgg tcgacgtctc
      241 caggatcgac ctctcgacga cgctgctcgg caaaccggtc aagctgccgc tcgcgatcgc
      301 cccgacgggc atcgccggct tgtgctggca cgagggcgag ctagaactcg ccaaggcggc
      361 tgcggcggca ggcatcccgt tcacactcgc caccggctcg aacacgtcga tggagaaggt
      421 cgcgcgggag gccggtggcc gcctgtggtt ccagctctac atgtgggaaa agcgggagct
      481 ttcgctcgag ctcgtggcgc gggcgcgcga cgcgggcttc gaggcgctga tcttgacggt
      541 cgacccggcg ctcggcgcca atcgcgaata caaccaacgc aacggcttca gccaaccgtt
      601 caggatcacg ccgcgcaacg tcgccgacgt gatgctgcat gcaggctggc tgagcggcgt
      661 cctgctgcgc tacctcgcac aaggcggcat gccgcggcac gagaactacc cgaaggaata
      721 tcggctccgc atcaccgacg atgcgggcgc caagaaagac ctgcgcgccc attcgatgaa
      781 ctggagcgac gtcgaccggc tgcgccaggc gtggccgggc aagctgatcc tcaaaggcat
      841 cctccacccc gaggatgcgc tgcgcgcggt ggcgagcggc gtcaacggca tcgtggtttc
      901 gaaccacggc gggcgcaaca tggacagcgc cgcggcgacc atcgacgtgc tgccagagat
      961 cgtcgaggcg gtgggcgagc gcacgaccgt gatgctcgac agcggcatcc ggcgcggcag
     1021 cgacatcgtc aaggcgctcg ccctcggcgc caaggcggtc ctggtcgggc gggcgacgct
     1081 gtacggcgtc atggtcggcg gccaggcggg cgccgagcac gcgctctcga tcctgcagac
     1141 cgagttgaag cgcaccatgg cctatgtcgc gtgccgcagc atcgccgagg tgaacgccca
     1201 tgtgctggcg ccgcgaaccc gaaccgcttc cggaacgatg taagtgaggc gacgcgcatg
     1261 acaatgctcg aacgattgac cccgaaggcg atcaccgttg gcgcggtgct gctggccggc
     1321 atatccgcga cgcgcgccga gcccgtcgca gatttctacc gcggcaagac ggtgaacgtg
     1381 ctgatcggcg tggcgccggg cggcgaatac gacctgcacg cccggctcgt cgctcgctac
     1441 atcggcaaat acattcccgg caatccgacc gtcgtgccgc agaatatgac cggcggcgga
     1501 gggctcagga tggccaacta cctctacgag gtggcgccca aggacggtac ggcgatcggc
     1561 atgattgcca ataccttccc ggccatgcag gccgtcggca tcggcggcat ccggttcgat
     1621 gcggcgaagc tcaactggat cggctcgatc tcgccgacgg tcgagacgat ggcggtgtgg
     1681 aagaccgcag gcgtgacgac gctcgaggag acgcgcgcca aggaggtggt ggccggggca
     1741 accgggcgcg gcgccatcac ttatatgctg ccggccatgc tcaacgatgt cctcgggacg
     1801 aaattcaaga tcgtgaccgg gtatcccggc ggcaacgacg tcaacctcgc catggaacgc
     1861 ggcgaggtcg gagcgcgcaa caacacctgg tcgagctgga aggtcaccaa gcccgactgg
     1921 ctgcgcaaca aggacatcac catcctcgtg caggcggggc cgcgtgctgc ggatctgccc
     1981 ggcgttccgt cggtcgagga tctcgtcaag agcgacgacg agcgtcagct cgtcaacctg
     2041 atcgtgtccg gcacgcgtct cgggcgcccg ctcgccacga cgccgggcgt gccggccgag
     2101 cgcgtgcagg cgctgcgcgc cgcgttcgac gcggtcatga aggacgctgg gttcctgaag
     2161 gaagcggcgg ccgcgaatgt cgaggtcgat ccggtccggg gcgatgacat gcaaaaggtg
     2221 gtcgacgagg tgctcgcgac gccaaagcac gtgcgcgacc gcgccaggcc gatcttcgaa
     2281 tgaccaacaa tccggcgaat ggacaccgtc ggccgaacgg agccggtccg ggacatccga
     2341 gaaacgacac cactcaagca ccgggggagc ctgcatgtcc aagccaaaaa ttctgatctt
     2401 cgcgccgcgc gaagaaccgc tcgagatccg tcgcaggctc gaggaggccg gctgtgcgat
     2461 cgcggtcggc gaccgcgcgt ggcaggtgcc gcgcgaggac catgagggag agctggtctc
     2521 ggccgcccgc gatgccgtcg ccctgatggg cacgtcgatc cgccatacgc cgatcagccg
     2581 ccgcgtgatg gaagcatcgc agcgtctgcg catcatcgcc aaatacacgg tcggcgtcga
     2641 cgatatcgac gtggatgcgg cgacggacct cggcatcctc gtctgccatt cgccgacgga
     2701 gtccaattgt ttcggcgtcg ccgagacgac catggccatg atgctcgcga tcctcaagaa
     2761 ggtgcgcgag cgcgacgccg atgtgcgcgc cggcaaatgg cgcgaaccgc accatgccac
     2821 cacgttcatc gccagccggt tctcggacga ccatcccggc gtcaccgtgg gcctggtggg
     2881 gctcggacgg atcggcacgc gcgtggcgca gcttctggcg ccgtggcgcg tgcgcatcct
     2941 cgcctacgac ccgtatatcg agccgtcacg gttcctgctc gcgggggcga ggcaggtcga
     3001 ttacgagacg ctcctgcgcg aatccgacgt ggtctcgttc catgtcgtgc tgacgagcga
     3061 gacgcgctac atgctgtccg aggcgcagat cgggctcatg aagccgagcg cggtcgtgat
     3121 caacacggcg cggggcaagg tcgtcgacga ggccgccctg gcgcgcgccc tcgaagccgg
     3181 gcacctgcgc ggtgccggca tcgacgcttt cgaggaggag ccgttgccgg ccgactcgcc
     3241 gctgcggcgg ctcggcgaca aggtcctgct gtcgccccat tccgccgcct tcaacgaggg
     3301 cggcgaactg cggccaggca tcgtctgggc gacccgctcc gtgttgacgg cgctgtcggg
     3361 tcaggtgccc gataacgtct ataacaaggc cgtgatccca cgctggaaag agcgttttgg
     3421 tgacgccgcg gtgacggggt gagctgaacg gcagcaggcg gcgatcgcct ggtcgaatcc
     3481 cgactgccta ttgcctctcg caggatcgca cctcgccgtc attccggctt ccgaccgtcg
     3541 gtccgccgcg gaaatgacaa tcgttgcgtg ccgtcttgtc tccacacgcc ccgcgatacc
     3601 atctaacatg cctcgcaaag caggcggggg ccggacgtga gaggaaggcc ttgtcatgaa
     3661 ggcactgacc gaggagcacc tcgccat
//
LOCUS       DATAIQ010001174         1529 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_180708, whole genome shotgun sequence.
ACCESSION   DATAIQ010001174 DATAIQ010000000
VERSION     DATAIQ010001174.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1529)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1529)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1529
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_180708"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..199
                     /locus_tag="VHN20_19425"
     CDS             <1..199
                     /locus_tag="VHN20_19425"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015822557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HEX2728000.1"
                     /translation="PNHVLPTARSARFSSGLGVPDFMKRTSILKCDAEALRSLGPAAI
                     TLARAEGLDGHARSVAIRLNL"
     gene            264..749
                     /locus_tag="VHN20_19430"
     CDS             264..749
                     /locus_tag="VHN20_19430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007567961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0262 family protein"
                     /protein_id="HEX2728001.1"
                     /translation="MAGGEDKRSRLVAVTLDERSIGRGSPDQEHERAVAIYDILETNS
                     FAVADHDGGPYTLRISLVDQKLCFEIRTAADEPVMTHVLSLTPLRRVVRDYELICDSY
                     YKAIRSAAPAQIEAIDMGRRGLHNEAAELLMQRLDGKVAIDLDTARRLFTLIYALHWK
                     G"
     gene            799..1227
                     /locus_tag="VHN20_19435"
     CDS             799..1227
                     /locus_tag="VHN20_19435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009494525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight phosphatase family protein"
                     /protein_id="HEX2728002.1"
                     /translation="MCARNAVRSPMAEALARHYFGKSVYVQSAGVRTSDADPFMVAVL
                     DEIGIDASKHRPRTLAELEEWEGVNFDLIITLAPEAHHAALELTRTVAADVEYWPTVD
                     PTIVQGSRQQLLDAYRDVRDGLSLRIRQRLKDRSSETPRV"
     gene            complement(1236..>1529)
                     /locus_tag="VHN20_19440"
     CDS             complement(1236..>1529)
                     /locus_tag="VHN20_19440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AzlD domain-containing protein"
                     /protein_id="HEX2728003.1"
                     /translation="AGPYLAIAAMTAATFFCRASGVMLMSRIRITRRVTRALRALPGS
                     IVVATVLPIALHAGPPAILGLVAGLTTMTLVRHELAALIVGLAAVSLARATGL"
BASE COUNT          265 a          520 c          525 g          219 t
ORIGIN      
        1 gccgaaccac gtcctgccga cggcccgttc ggcgcggttc tcgtctggcc tcggcgtgcc
       61 cgacttcatg aagcgcacgt cgatcctcaa atgcgacgcc gaggcgctgc gcagcctcgg
      121 gcctgcggcg atcaccctgg ccagggcgga ggggctcgac ggccacgcgc gctcggttgc
      181 gattcgcttg aacctttgaa gccggacggc ttcaaggtat ccacttcgcc ggatcatgcg
      241 gcgacggcgc gggcagggca gggatggcgg gcggcgaaga caaacgatcg cgtcttgtcg
      301 cggtgacgct cgacgaacgc tccatcgggc gcggcagccc ggaccaggag cacgagcgcg
      361 ccgtcgccat ctacgacatc ctcgagacca actccttcgc cgtcgccgac cacgatggcg
      421 gcccgtacac gctgcgcatc tcgctcgtcg accagaagct ctgcttcgag atccggaccg
      481 ctgccgacga gcccgtgatg acccacgtgc tgtcgctgac gccgctgcgc cgcgtggtcc
      541 gggattacga gctgatctgc gacagctatt acaaggcgat ccggtccgcc gccccagccc
      601 agattgaggc gatcgacatg ggccggcgcg gcctgcacaa cgaggcggcc gagctcctga
      661 tgcagcgcct cgacggcaag gtcgcgatcg acctcgacac ggcacgccgc ctcttcacgc
      721 tgatctacgc cctgcactgg aagggctgaa cgcgtggaga caaaggaagg acggaaacgc
      781 gtccaatccg tgctgttcat gtgcgccagg aacgccgtcc gttcgccgat ggccgaggcg
      841 ctggcgcggc actatttcgg caagtcggtc tacgtgcagt cggcgggcgt gcgcaccagc
      901 gacgcggacc cgttcatggt cgccgtgctc gacgagatcg gcatcgatgc atcgaagcac
      961 aggccgcgca cgctcgccga gctcgaggag tgggaggggg tcaatttcga cctgatcatc
     1021 acgcttgcgc cggaggccca ccacgccgcc ctcgagctga cgcgcacggt cgcggccgac
     1081 gtcgaatact ggccgaccgt cgatccgacg atcgtgcagg gctcgcggca gcagctgctc
     1141 gacgcctatc gcgacgtgcg cgacggactt tcgctgcgca tcaggcagcg tctgaaggac
     1201 cggtcctccg agacgcctag agtttagaca tcatcctaaa gaccggtcgc ccgcgccaga
     1261 ctgacggcgg cgaggccgac gatcagggcg gccagctcgt ggcgcacgag agtcatcgtc
     1321 gtcagcccgg cgacgaggcc gaggatcgcg ggcggcccgg cgtgaagcgc aatcggcagc
     1381 accgtcgcga caacgatcga gccgggaagg gcgcgcaacg cccgggtcac gcgccgcgtg
     1441 atgcggatgc ggctcatcag catgacgccg gaggcgcggc agaagaacgt cgcggcggtc
     1501 attgcggcga tcgcgagata ggggccggc
//
LOCUS       DATAIQ010001175         3015 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_85472, whole genome shotgun sequence.
ACCESSION   DATAIQ010001175 DATAIQ010000000
VERSION     DATAIQ010001175.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3015)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3015)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3015
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_85472"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1179
                     /gene="dnaA"
                     /locus_tag="VHN20_19445"
     CDS             <1..1179
                     /gene="dnaA"
                     /locus_tag="VHN20_19445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010681825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003688 - DNA replication origin binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA];
                     GO_process: GO:0006275 - regulation of DNA replication
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HEX2728004.1"
                     /translation="PAREPVRAAKPNGEGPRLVSAGAVETTIVYPGEHRATRDERADS
                     GEVTGAPLDPRLTFESFVLGRSNALAHAAGDRVAQHQGSQALYNPLYVHAGVGLGKTH
                     LLHAVGHEARRNGRRVIYLTADRFMYGFVASLKAQTSLAFKERLRGIDLLIIDDVQFI
                     QGKSIQQEFGHTLNALIDSGRQIVVAADRPPSDLESLDERVRSRLAGGLVVEIGVLDE
                     ALRASILERRVAAVKAAHPTFDVSPAVVSYVARAITANGRDLEGAVNRLLAHATLTGS
                     PVTPETAEIAIRDLVRNREPKRVKIEDIQKLVASRYNVSRSDILSERRTAAVVRPRQI
                     AMYLAKVLTLRSLPEIGRRFGGRDHTTVLHAVRKIEKALGEDASLSDEVELLKRMLQE
                     "
     gene            1432..2550
                     /gene="dnaN"
                     /locus_tag="VHN20_19450"
     CDS             1432..2550
                     /gene="dnaN"
                     /locus_tag="VHN20_19450"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012330008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HEX2728005.1"
                     /translation="MKVTVERAALLKSLGHVHRVVERRNTIPILANVLLRAEGQGLRL
                     KATDLDIEVTETIPADVAEGGATTVPAHVIYDIVRKLPEGAQASLETARDATQMQIRS
                     GRSRFMLQALPESDFPDLAAGDLPHRFTLPASDLKRLIDKTQFAISTEETRYYLNGIY
                     FHTIAAEGATMLRAVATDGHRLARVEMAAPPGADGMPGIIVPRKAVAEIQKLVEDADA
                     EVAVELSASKIRLTFNGVVLTSKLIDGTFPDYQRVIPSGNDKRLTVERDDFAKAVDRV
                     STISSERGRAVKLALSDGRLMLSVNNPDSGSATEELEVEYEAAALDIGFNARYLLDIT
                     GQLDGDTALFRLADPGSPTLIQDREGAPALYVLMPMRV"
     gene            2683..>3015
                     /locus_tag="VHN20_19455"
     CDS             2683..>3015
                     /locus_tag="VHN20_19455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012319208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006302 - double-strand break repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX2728006.1"
                     /translation="MTPTPPPRGEGTLRVTRLILEAFRSYAALDLTLSGRLVALVGEN
                     GVGKTNLIEALSLFAPGRGLRRADLAEMARRPGAGAFAVSATVETAYGEHRLGVGLER
                     PDPEARASR"
BASE COUNT          473 a         1053 c         1011 g          478 t
ORIGIN      
        1 ccggcccgcg agccggtgcg cgccgccaag ccgaacggcg aggggcctcg gctggtctcg
       61 gccggcgccg tcgagacgac gatcgtttac ccgggcgagc atcgggcgac ccgcgacgag
      121 cgggccgaca gcggcgaagt caccggcgcg ccgctcgatc cgcgcctgac cttcgaaagc
      181 ttcgtgctcg gccgctccaa cgcgctggct cacgccgccg gcgaccgggt cgcgcagcac
      241 cagggcagcc aggcccttta caacccgctt tatgtccacg ccggggtcgg gctcggcaag
      301 acccacctgc tgcacgccgt cggtcacgag gcgcgccgca acggccggcg cgtcatctac
      361 ctgacggcgg accgcttcat gtacggcttc gtcgcgtccc tgaaggcgca gacgtcgctg
      421 gccttcaagg agcggctgcg cggcatcgac cttctgatca tcgacgacgt gcagttcatc
      481 cagggcaagt cgatccagca ggagttcggt cataccctga acgctctgat cgacagcggt
      541 cgccagatcg tcgtcgcggc ggaccgtccg ccgagcgatc tcgaaagcct ggacgaacgc
      601 gtccgctcgc gtctcgcagg cggtctcgtg gtcgagatcg gcgtcctcga cgaggcgttg
      661 cgcgcatcca tcctcgagcg ccgggtcgcc gcggtcaaag ccgcgcatcc caccttcgat
      721 gtcagccctg cggtggtgtc ctatgtggcg cgcgccatca cggccaacgg ccgcgatctg
      781 gaaggggcgg tgaaccggct tctcgcccac gccaccctga ccggctcgcc ggtcacgccg
      841 gagaccgcgg agatcgccat ccgcgacctc gtgcgcaatc gcgagccgaa gcgggtcaag
      901 atcgaggaca tccagaagct cgtggccagc cgctacaatg tttcgcgctc cgacatcctg
      961 tccgagcggc ggacggccgc ggtcgtgcgt ccgcgtcaga tcgccatgta tctggcgaag
     1021 gtgctgacgc tgcggtcgct gccggagatc ggccggcgct tcggcgggcg cgaccacacc
     1081 acggtcctgc acgccgtgcg caagatcgaa aaggcgctcg gcgaggatgc gtcgctgagc
     1141 gacgaggtcg agcttctcaa gcgcatgctg caggagtgaa tttcctgcag gagcggtcct
     1201 cgcggctacc ggggatcaag ggtgaggctt gcgttccgcg caagccttcg ccaatctgcg
     1261 cgccctgctt ttccggagtc tgctccaggg cgttcccggc gaaacgggat ccgggttgac
     1321 ggccgccgcg cctctgctgg ggcgcgggcc gccggcgaac cggctcccgc tcgtgcggaa
     1381 tgcgccttcg agacgggccc ggcgtgaagc ctccatttgg cgggtctgcc catgaaagta
     1441 acagttgagc gagcggcgct gctgaagtcg ctcggccacg tccatcgtgt cgtcgagcgg
     1501 cgcaatacga tcccgattct ggcgaacgtg ctgctgcggg ctgaagggca ggggctcagg
     1561 ctcaaggcga ccgatctcga tatcgaggtc accgagacca ttccggccga cgttgccgag
     1621 ggcggcgcta ccacggttcc ggcgcacgtc atatacgaca tcgtgcgcaa gcttccggaa
     1681 ggtgcccagg cctcgcttga gacggcccgc gacgccaccc agatgcaaat tcgttccggc
     1741 cgctctcgct tcatgctgca ggcattgccg gagagcgatt tccccgatct tgccgcgggc
     1801 gacctgccgc atcgcttcac gctgccggcg agcgacctca agcgtctgat cgacaagacg
     1861 cagttcgcca tctcgacgga agagacgcgc tattatctga acggcatcta cttccatacc
     1921 atcgccgccg aaggggccac gatgctccgc gcggtcgcga ccgacggtca tcgccttgcc
     1981 cgcgtcgaga tggcggctcc gcccggcgcc gacggcatgc ccggcatcat cgtcccgcgt
     2041 aaggcggtcg ccgagatcca gaagctggtc gaggacgcgg atgccgaggt tgcggtggag
     2101 ctgtcagcca gcaagatccg cctgaccttc aatggcgtcg tgctgacgtc caagctgatc
     2161 gacggcacgt tcccggacta ccagcgcgtg atcccgagcg gcaacgacaa gcgcctgacc
     2221 gtcgagcgcg acgacttcgc caaggcggtc gaccgcgtct cgacgatctc gtccgagcgc
     2281 ggccgggccg tgaagctggc cctcagtgac gggcgcctga tgctgtcggt caacaacccc
     2341 gattccggca gcgccaccga ggagctcgag gttgaatacg aggcggcggc gctcgatatt
     2401 ggcttcaacg cccgttacct gctcgacatc accgggcagc tcgacggcga cacggccctg
     2461 ttccggcttg ccgaccccgg ctcgccaacc ctgatccagg accgcgaggg cgccccggcc
     2521 ctgtacgtgc tgatgcccat gcgggtttag gcccgctccc ttgcgggggg aggcaggggt
     2581 ggggtcgtcg gccgagaatg gaacgattga gtgttgaccg cgccagatct cgaagccgcc
     2641 cataccgcgc gcacaatttc tgacgggacc tcaccaggcg ggatcacccc cacccctccc
     2701 cccagggggg aggggacgct gcgcgtcacg cgcctgatcc tcgaagcttt tcgcagctac
     2761 gcggccctcg acctgacgct gtcgggtcgc ctcgtggcgc tggtcgggga gaacggcgtc
     2821 ggcaagacaa acctgatcga ggccctgtcg ctgttcgcac caggccgcgg tttgcgccgt
     2881 gccgatctcg ccgagatggc gcgccgcccc ggggcgggtg ctttcgcggt ctcggcgacg
     2941 gtcgagacgg cgtatggcga gcatcgcctc ggcgtcggcc tcgagcgtcc cgatcccgaa
     3001 gcgcgcgcca gccgc
//
LOCUS       DATAIQ010001176         1709 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_181052, whole genome shotgun sequence.
ACCESSION   DATAIQ010001176 DATAIQ010000000
VERSION     DATAIQ010001176.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1709)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1709)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1709
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_181052"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(31..990)
                     /locus_tag="VHN20_19460"
     CDS             complement(31..990)
                     /locus_tag="VHN20_19460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011474062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEX2728007.1"
                     /translation="MSDVTAGRLPARTPIPQSTTWDRLKTNRQWLGRWFMLPAAGFLV
                     LFLAYPLILGIWMSFTDARIGRPGVFIGLENYEWLIEDNSFVNATLFTISYTVVASIF
                     KFAIGLYLALLLNRYIPFRAMVRAIILIPFIVPTVLSAIAFWWIFDPQFSIISWSLRK
                     LGLISGNIDFLGVPLHAQASVIFANIWRGVPFIAITLLAGLQTVPPSLYEAATLDGAS
                     PWQMFRFITYPLLTPIIAVVMTFSVLFTFTDFQLIWAMTRGGPVNATHLMATLSYQRG
                     ILGGRLGEGAAIATAMVPFLLAAIMISWFGLQRRKWQHGESND"
     gene            complement(1052..>1709)
                     /locus_tag="VHN20_19465"
     CDS             complement(1052..>1709)
                     /locus_tag="VHN20_19465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011474063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX2728008.1"
                     /translation="GQVVDANDKVIITSPETEKALAYAKQLYEYMIPGTASWNDAFNN
                     KAFLANEIHWTNNGISIYVAATNDPTKKDVAEDMNHAYFPIGPIGKPTELHLMYPILA
                     MNYTKYPQASKALMAFMLEGDQFNKWISAARGYLTHCLNAYDANPVWTEDPKRTPYRD
                     VAKRSLTAGGLGSVGEKAATAIADFVVLDMFANVCTGREDPKSAMKMAERQLQRIYRA
                     "
BASE COUNT          312 a          496 c          603 g          298 t
ORIGIN      
        1 gggtcggggc cggtgtcgac ggcggttgcc ttagtcattg gactctccgt gctgccactt
       61 gcggcgctgg aggccgaacc acgagatcat gatggcggcg agcaggaacg gcaccatcgc
      121 ggtggcgatc gccgcgccct cgccgaggcg cccgcccagg atgccgcgct ggtacgacag
      181 cgtcgccatg aggtgcgtcg cgttcaccgg cccgccgcgg gtcatggccc agatcagctg
      241 gaagtcggtg aaggtgaaca gcaccgagaa cgtcatgacg acggcgatga tgggggtgag
      301 cagcgggtag gtgatgaagc ggaacatctg ccaaggggac gccccgtcga gcgtcgccgc
      361 ctcgtagagc gacggcggca cggtctgcag gccggccagc agcgtgatgg cgatgaacgg
      421 cacgccgcgc cagatgttgg cgaagatcac gcttgcctgg gcatgcaggg gcacgcccag
      481 gaaatcgatg ttgccggaga tcagcccgag cttgcgcagg gaccaggaga tgatcgagaa
      541 ctgcgggtcg aatatccacc agaaggcgat cgccgacagg acggtcggga cgatgaacgg
      601 gatcaggatg atggcgcgga ccatcgcccg gaagggaatg tagcggttga ggagcagggc
      661 aagatagagc ccgatcgcga acttgaagat gctcgccacc accgtgtagc tgatcgtgaa
      721 cagggtggcg ttgacgaagc tgttgtcctc gatgagccac tcgtagttct cgagaccgat
      781 gaagacgccg ggccgaccga tgcgggcatc ggtgaagctc atccagatgc ccagtatcag
      841 cgggtaggcg aggaacagca ccaggaagcc ggccgccggc agcatgaacc accggcccag
      901 ccattgccgg ttggtcttca ggcgatccca cgtcgtcgac tgcgggatcg gcgtgcgggc
      961 cggcagacgg ccggcggtga cgtcgctcat gatgagctcc cgaaaaggcg gcgcgcgatg
     1021 gctcgcgcgc agccgatgga gccgaagccg ttcaggcccg atagatgcgc tgcagctggc
     1081 gctcggccat cttcatggcg ctcttcggat cctcgcggcc ggtgcagaca ttggcgaaca
     1141 tgtcgagcac gacgaaatcg gcgattgcgg tcgccgcctt ctcgccgacc gagccgaggc
     1201 cgccggccgt gagcgagcgc ttggcgacgt cgcggtaagg cgtgcgcttc gggtcctccg
     1261 tccacaccgg attggcgtcg taggcgttga ggcaatgagt caggtagccc cgcgccgccg
     1321 agatccattt gttgaactga tcgccttcga gcatgaacgc catcagcgcc ttactggcct
     1381 ggggatattt cgtgtagttc atggccagga tcgggtacat caggtgcagc tcggtcggct
     1441 tcccgatcgg cccgatcggg aaataggcgt ggttcatgtc ctccgcgacg tccttcttgg
     1501 tcgggtcgtt ggtcgcggcg acgtagatcg agatgccgtt gttggtccag tggatctcgt
     1561 tcgccaggaa cgccttgttg ttgaaggcgt cgttccagga cgctgtgcca gggatcatat
     1621 attcataaag ctgcttcgcg taggcgagcg ccttctcggt ctcgggcgag gtgatgatca
     1681 ccttatcgtt ggcatcgacg acctggccg
//
LOCUS       DATAIQ010001177         2258 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_181605, whole genome shotgun sequence.
ACCESSION   DATAIQ010001177 DATAIQ010000000
VERSION     DATAIQ010001177.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2258)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2258)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2258
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_181605"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..221
                     /locus_tag="VHN20_19470"
     CDS             <1..221
                     /locus_tag="VHN20_19470"
                     /inference="COORDINATES: protein motif:HMM:NF019938.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF1731 domain-containing protein"
                     /protein_id="HEX2728009.1"
                     /translation="ARELLLGGQRVLPRRVEASGFVYQHRTLEDALARVLGSRRKRQA
                     VATRQLGLSPAAASDGTGPAPAASPIER"
     gene            complement(234..602)
                     /locus_tag="VHN20_19475"
     CDS             complement(234..602)
                     /locus_tag="VHN20_19475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009492323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF305 domain-containing protein"
                     /protein_id="HEX2728010.1"
                     /translation="MKAKTLLALAALAALPTPALAKDAHSGHAARATTGATTATKAYR
                     AANARMHRNMDIRFSGDADVDFVRGMIPHHQGAIDMAKVVLQHGKDEQARKWATDVIR
                     EQEREIVEMQAWLKQRGAKP"
     gene            739..1065
                     /locus_tag="VHN20_19480"
     CDS             739..1065
                     /locus_tag="VHN20_19480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2728011.1"
                     /translation="MSEGKRLLRQAFKDLERELPERLGRALRWLRHPGSRLVRIPAGL
                     LLTIGGIFSFLPALGIWMLPLGLMLIAYDVPVLRKPVAAFTIWGARRWAVLRGRFARL
                     RRSRHA"
     gene            1534..>2258
                     /locus_tag="VHN20_19485"
     CDS             1534..>2258
                     /locus_tag="VHN20_19485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2728012.1"
                     /translation="MRALLAGLGLTLTLIAVAAKADTHPVAAEARAGREAFVETFRRT
                     GTVQHGMLAPHRARVEAALSAAPDPAERAELLVEHGQLTRLASQFDGARAAFERAVAE
                     AGRARRPDLGFEAAIALARLHVTGTRDYDAAGTALADATSAAGPAPGRKQQYALASFG
                     SELLGARGELALGLVSAARALGSAETPVDSFYAQFGLADLFLALANRCDYEPLYEECL
                     KAAGAADRAYDRAAAVAESAGWPA"
BASE COUNT          275 a          759 c          832 g          392 t
ORIGIN      
        1 tggcccgcga gctgcttctc ggcggtcagc gcgtgctgcc gcgccgggtc gaagccagcg
       61 gctttgtcta ccagcatcgc accttggagg acgcattggc gcgcgtcctc ggcagcaggc
      121 gcaagcggca ggcggttgcg acgcggcaac tcggcctctc gccagcggcg gcgtcggatg
      181 ggaccggccc cgcgccggcg gcgtcgccga tcgagcggta aggccgaccc ggctcaaggc
      241 ttcgcgccgc gctgcttgag ccaggcttgc atctcgacga tctcgcgctc ctgttcccgg
      301 atcacgtcgg tcgcccattt cctggcctgc tcgtccttgc cgtgttgcag gacgaccttg
      361 gccatgtcga tggcgccctg gtggtgcggg atcatgccgc gcacgaaatc gacgtcggca
      421 tcgccggaga agcggatgtc catgttcctg tgcatcctgg cgttggcggc gcggtaggcc
      481 ttggtcgcgg tcgtggcgcc cgtcgtggcg cgggcggcgt ggccggaatg ggcgtccttc
      541 gcgagggccg gcgtgggcag cgcggcgagc gccgcgagag ccaacagggt tttcgccttc
      601 atgtgcgctc cttacatggg gtcgggggct tatgcggcct tccaacgtgg caaggtcaag
      661 ggagacccgc ggtcgtgccg acgacagccg gaacattctc gcgccttcgg ccttatgtag
      721 gtcttgcagg aggacggagt gtcggaagga aagaggctgc tgaggcaggc gttcaaggat
      781 ctcgagcgcg agcttcccga gcgtctggga cgggcgctgc gatggctgcg ccacccgggt
      841 tcccgtctcg tgcgcattcc tgccggcctg ctcctgacga tcggcgggat cttctcgttc
      901 ctgccggcgc tcgggatctg gatgctgccg ctcggtctca tgctgattgc ctacgacgtg
      961 ccggtcctgc gcaagcccgt cgccgctttc acgatctggg gcgcgcgcag atgggcggtg
     1021 ctgcgcgggc gcttcgcccg tctgcgcagg tcacgccacg cttgagccgt cgcgtgttgg
     1081 cgccggcaag gcttgctgcc gcggaccgcg agcaggggag gggagtgccc gcgcgggcga
     1141 tgccggcgcg cgttgtgcgc ttcacgagcg cgttgcgttg cggcgcccgg ctaacaacgg
     1201 ggatatctgg gacaacgccg gaaaaacgcc gcgggcgtgc agcgcaagcc gcgccgttgt
     1261 gctcttgcag aacggtgcgg cggttgacca cctgccgctc ttttgagccc gttggtccga
     1321 cttcgggccc ggcacaagcc gggccttctt cttttcggca gggccctatg tgcaggttgc
     1381 cgcgcgttgc ggaaccgccc gtgtaatgcc gctcacatgg ggtttgggcg acgcgcgcta
     1441 gcgtgcctcg atgtcgatcg ccgggcgggg ctcgttccgc aggccttgcg ggtgtagagt
     1501 tccccgatcc ggttcaggtc cggagtagcc gccatgcgtg ctctgttggc cggtcttggg
     1561 cttacgctta ccctcatcgc cgtcgcagcg aaggccgaca cgcaccccgt ggccgccgag
     1621 gcccgggccg ggcgcgaggc gttcgtcgag acgttcaggc gaaccgggac ggtgcagcac
     1681 ggcatgctgg cgccgcaccg ggcgcgcgtc gaggcggcgc tgtccgccgc gcccgatccg
     1741 gccgaacgcg cggagcttct cgtcgagcac gggcagctga cgcggctcgc gtcgcagttc
     1801 gatggggccc gcgccgcctt cgaacgggcc gttgccgagg ccgggcgggc gcgtcgcccg
     1861 gacctcggtt tcgaggctgc catcgcgctc gcgcgcctgc atgtcaccgg caccagagat
     1921 tacgatgccg ccgggacggc gcttgccgat gcgacgagcg ctgcaggccc ggctccgggc
     1981 cgcaagcagc aatacgcgct ggcgagcttc ggcagcgagc tgctgggcgc gcgcggcgag
     2041 cttgcgctcg gcctcgtttc cgcagcgcgc gccctcggca gcgccgagac gcccgtcgac
     2101 agcttttatg cgcaattcgg gttggcggac ctgttcctgg cgctcgccaa ccgctgcgat
     2161 tacgagcctc tctacgaaga gtgcctgaag gcggccggcg cggccgatcg cgcttatgac
     2221 cgcgccgcgg cggttgccga aagcgccggc tggccggc
//
LOCUS       DATAIQ010001178         5497 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_181867, whole genome shotgun sequence.
ACCESSION   DATAIQ010001178 DATAIQ010000000
VERSION     DATAIQ010001178.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 5497)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5497)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5497
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_181867"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(277..930)
                     /locus_tag="VHN20_19490"
     CDS             complement(277..930)
                     /locus_tag="VHN20_19490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015928269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family oxidoreductase"
                     /protein_id="HEX2728013.1"
                     /translation="MPATPSIAVFSDVICPWCFLGKRRLERALAEVGISAPIRWLPFE
                     LNPAMPPEGMERALYRARKFGPDKAGRLDREMTARGLEEGIRFTFGHIERTPNTRKAH
                     MLIAHASSLGFGDAAAEALFRAYFERALDIGRTEVLADLAREIGLDPDAALAALDDPA
                     LLAAVVAAEDEAARLDVSGVPFFILDGTRAIAGAQPATVWVDLLRQGANLGSQVPAG"
     gene            1050..1925
                     /locus_tag="VHN20_19495"
     CDS             1050..1925
                     /locus_tag="VHN20_19495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015929440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HEX2728014.1"
                     /translation="MIYRLLVGGLAVAGLAQPACAYDVNARVALDPLITKHAKANDIP
                     AALVHRIILRESRYNARAVGRGGTLGLMQIKHGTARALGYAGAAEGLLDPDTNLTFGV
                     RYLAGAYRVANGDQNRAVGYFARGYYYDAKRRGMHRTLAQRPVAAEVAEAAPAPVAPP
                     AQPPSLFAALFAPPAQSAPEMAPGVAQPVVEEQQAPVAPAKRRRRPAAASAAVADQVS
                     GSAGGRPAHRRQVSAVPTPAAANAVRDEGRIGVEEAEGTVRRSVRPARRARAADADHS
                     ARKASAQPGDPGRSP"
     gene            complement(1822..2214)
                     /locus_tag="VHN20_19500"
     CDS             complement(1822..2214)
                     /locus_tag="VHN20_19500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012252201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX2728015.1"
                     /translation="MDGTRNGNDLNGLRILVVEDEAAISLLLEDMLLDFGCEVVGPAG
                     RLNTALDLAATESIDLAILDVNVAGEPVYPVAETLEKRNVPFVFSTGYGSAGIKETYR
                     DRPVVQKPFAQSDLRQRLVHALQAERSA"
     gene            2529..3011
                     /locus_tag="VHN20_19505"
     CDS             2529..3011
                     /locus_tag="VHN20_19505"
                     /inference="COORDINATES: protein motif:HMM:NF016955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerB family tellurite resistance protein"
                     /protein_id="HEX2728016.1"
                     /translation="MPFFNTLIELAAKTFGPPADERRAPEDDQRLAMAALLLHVARAD
                     GRLRDADRARLAALFQFWFRLPAEEAKRLVARGDVVDRETHSLATLVGMAAPDVPAAE
                     RRELLAMAYTVAAVDGAMQEFEDDLVWRVGQLLGLDDQDIVAVKDATLGGTTVSHAVP
                     "
     gene            3057..3650
                     /locus_tag="VHN20_19510"
     CDS             3057..3650
                     /locus_tag="VHN20_19510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019996831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004725 - protein tyrosine phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0006470 - protein dephosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-tyrosine phosphatase family protein"
                     /protein_id="HEX2728017.1"
                     /translation="MKPISISMLTICGLEELEHHSGRAVTHVLSILDPDCPDPGAFRA
                     YDRHHRTILRFHDIIEPIPEQILPEPADVEAILAFGRSLGEDAAERDEGHLLVHCHAG
                     ISRSTAAMAMLLAQVHPDQAEKDIFERLLEIRPQAWPNSRMIGFADDLLARDGRLTAA
                     LARLYRRQLARRPDLAETMRYHRRGREIDMAEAASLA"
     gene            3721..4896
                     /gene="ampC"
                     /locus_tag="VHN20_19515"
     CDS             3721..4896
                     /gene="ampC"
                     /locus_tag="VHN20_19515"
                     /EC_number="3.5.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003597685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0008800 - beta-lactamase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class C beta-lactamase"
                     /protein_id="HEX2728018.1"
                     /translation="MPVTTRAVRPLALAIISSCLLAPASRAADNPDRIAAAVDRAFRP
                     LLKEHDVPGIAVAVTVDGRQHFFSYGVAAKDRNAPVGKDTLFEIGSISKTFTATLVSY
                     AQALGRISLDDHPGKYIPQLRGSAIDAASLLNLGTYTAGGLPLQFPDAVTSPAGMVPY
                     LRQWKPSAAPGTQRRYSNPSIGLAGRITALAMHGDFADLVETEIFRRLGLGHSYIRVP
                     AAETANYAWGYNKAGKPVRVTPGVLDAEAYGVKSTAADMIRFVEANIRPETLEMPIRR
                     AVEGTHVGYFRIGEMVQGLGWEQYPYPVTLERLLAGNSTGMVMESNAAAQLTPPRAPS
                     EPTLFNKTGSTNGFGAYAAFVPATRIGIVMLANKNLPVPARITAAHAVLQQLSEKAP"
     gene            5006..>5497
                     /locus_tag="VHN20_19520"
     CDS             5006..>5497
                     /locus_tag="VHN20_19520"
                     /inference="COORDINATES: protein motif:HMM:NF014476.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2728019.1"
                     /translation="MLIIGNDVVAQILTMPDCLRVQEEAFRKLPAGGAMHRPRIDMYF
                     PCERDDGYFRWGSMEGANDGFFAIRMKSDIITWPKTPDGGWTEDKYCREPGTYCGIIF
                     LISTRNGEPLAFINDGVLQHMRVGGGAGIGTKYLSREDSHVIGMLGSGGMARTFLEAF
                     TCVR"
BASE COUNT          904 a         1895 c         1829 g          869 t
ORIGIN      
        1 gtatgatcga ttgcggcctc ggccttaaat gaagaaacga atgtagaagc aacgagcgta
       61 gccaatacag gcagggcgac ttgatgtaat ttcacaatgc attcccgctt tgttgtcggt
      121 gcgggagcta tgtaaggtca aacgtgacga gaattgggcg ctatattcgc ccaagtgttt
      181 tgcaataggc tgcctgctcg acaatttgcg cgaacctata cgcttactcc ggcttccaag
      241 tcctttctaa attattctgg ccgaatcgac tagttttcat ccggcgggga cttgcgagcc
      301 caagttggcg ccctgccgca gcaggtccac ccacacggtt gcgggttgcg cccccgcgat
      361 cgcccgcgtg ccgtcgagga tgaagaaggg caccccggag acgtcgaggc gggcggcctc
      421 gtcctcggcg gcgaccaccg cggcgagcag ggcggggtcg tcgagcgcgg cgagcgccgc
      481 gtcggggtcg aggccgatct cgcgcgcaag gtcggccaga acctcggtgc ggccgatgtc
      541 gagcgcgcgc tcgaaatagg cccggaacag cgcctcggcc gccgcgtcgc cgaagccgag
      601 ggacgaggca tgggcgatca gcatatgggc cttgcgcgtg ttcggggtgc gttcgatgtg
      661 gccgaaggtg aagcggatgc cctcctcgag gccgcgggcg gtcatctcgc ggtcgagccg
      721 cccggccttg tcgggcccga acttgcgggc gcggtagagg gcgcgctcca ttccctccgg
      781 cggcatcgcg ggattgagct cgaagggcag ccaacggatg ggcgccgaaa tcccgacctc
      841 ggcgagggcc cgttccaggc ggcgtttacc aaggaagcac cacggacaga tcacgtcgga
      901 aaatacggcg atggacggcg ttgcaggcat cggcgcgctc ccgcggaagg ggagccagcc
      961 tgcgccgggc gcatgcgggc tggcaagcct gccccgatgt ggcccgattt gacagtgaac
     1021 aaagtggttc tgaaacgcac aggggtccaa tgatttaccg ccttctcgtc ggcgggctgg
     1081 ccgtggccgg cctggcccag ccagcctgcg cctacgacgt caacgcccgg gtcgcgctgg
     1141 accccctgat caccaagcat gccaaggcga acgatatccc ggcggcgctc gtccaccgca
     1201 tcatccttcg cgagagccgc tacaacgcgc gcgccgtcgg gcgcggcggc accctggggc
     1261 tcatgcagat caagcacggc acggcgcgcg ccctcggcta tgccggggcg gcggagggcc
     1321 tcctcgatcc ggataccaac ctgaccttcg gggtccgtta tctcgccggc gcgtatcggg
     1381 tcgccaacgg cgatcagaac cgggccgtcg gctatttcgc gcgtggctac tactacgacg
     1441 cgaagcgtcg gggcatgcac cgcacccttg cgcaacgccc ggtcgcggcc gaggtggcgg
     1501 aggcggctcc cgcgcccgtc gcgccgccgg cgcagcctcc atcgctgttc gccgcgctgt
     1561 ttgcgccgcc cgcgcagagc gcgccggaga tggcgcccgg cgtcgcgcag ccggtcgtcg
     1621 aagagcagca ggcgccggtc gctccagcca agcgcaggcg gcgccctgcg gccgccagcg
     1681 cggccgttgc ggatcaggtt tcaggatcag ctggtgggag gcccgcgcac aggcgccagg
     1741 tctctgccgt gcccacgccg gccgcagcga atgcggtccg cgacgaaggg cggatcggcg
     1801 tggaagaggc cgaggggacg gtcaggcgga gcgttcggcc tgcaaggcgt gcacgagccg
     1861 ctgacgcaga tcactctgcg cgaaaggctt ctgcacaacc gggcgatccc ggtaggtctc
     1921 cttgatgccg gcgctgccgt agccggtcga gaacacgaac ggcacgttgc gcttctcgag
     1981 cgtctcggcg accgggtaga ccggctcgcc ggcgacgttg acgtcgagaa tggcgaggtc
     2041 gatcgattcc gtcgcagcga ggtcgagggc cgtgttgagg cggccggccg ggccgaccac
     2101 ctcgcagccg aaatcgagca gcatgtcttc gagcaggagc gagatcgccg cctcatcctc
     2161 gactacgaga atgcgcaagc cgttcaggtc gttgccgttg cgcgtgccgt ctatcactgc
     2221 cccatcccgt ctcgatgatg cggttgcaca accgcaaagc ggcagccggc ccagcgccgg
     2281 cgcggatcgt tccgccgcaa ttctttttgc agggggctcg cctacgcccc tcggttgacc
     2341 gtcttctatc gggttcgatc ccggaatgta agggctttcc gggcgcggcg cggccccgcg
     2401 actcgttaac gttgtcatgg cccgccgatc ctgaaccgcg gatgaagacg agtgcccggc
     2461 cgcttcgtcc ggacgccctg agaccttgcg cggccgcaag ggcaagccac ataggtgaca
     2521 tggttaccgt gccgtttttc aacaccctga tcgagcttgc cgcgaagacg ttcgggccgc
     2581 cggccgacga gcgccgggcg ccggaggacg accagcgcct ggcgatggcc gctctcctcc
     2641 tgcacgtggc gcgcgccgac ggtcgcctgc gcgacgccga ccgggcgcga ttggcggccc
     2701 tgttccagtt ctggttcagg ctgcccgccg aggaggccaa gcgcctcgtg gcccggggcg
     2761 acgtggtcga tcgggaaacc cacagcctcg ccaccctggt cgggatggcc gcgcccgacg
     2821 tcccggcggc cgagcggcgg gagcttctcg caatggccta cacggtcgcg gcggtggacg
     2881 gcgccatgca ggaattcgag gacgacctcg tctggcgcgt cgggcagctg ctcggcctcg
     2941 acgaccagga catcgtcgcc gtcaaggacg ccacgctcgg cggcacgacg gtgtcgcacg
     3001 cggtgccgtg acccgagggt tcccgcggca acggcggctg tgctaactca cgccgcatga
     3061 aaccgatctc gatctcaatg ctgacgatct gcgggctcga ggagctcgag caccacagcg
     3121 gccgcgccgt cacgcatgtc ctctcgattc tcgaccccga ttgtccggat ccgggcgcgt
     3181 tccgcgccta tgatcggcat caccgcacga tcctgcgctt ccacgacatc atcgagccga
     3241 tccccgagca gatcctgccc gagcccgccg atgtcgaggc gatcctcgca ttcggccgct
     3301 cgctcggcga agacgcggcc gaacgcgacg aaggccatct cctcgtccat tgccatgccg
     3361 gcatttcgcg ctcgaccgcg gcgatggcga tgttgctcgc acaggttcac ccggaccagg
     3421 ccgagaagga cattttcgag cggcttctcg agatccggcc gcaggcctgg ccgaactcgc
     3481 gcatgatcgg cttcgccgac gatcttctcg cgcgcgatgg ccggctcacc gcggcgctcg
     3541 cacgcctgta ccggcgacag ctggcgcgcc ggcccgatct cgccgagacg atgcgctacc
     3601 atcgccgcgg ccgcgagatc gacatggcgg aagcagcgag cctcgcctag ccgatcccgt
     3661 tcctcgtcga gcacgcttca ggtcacggcg aacgccatcc gcaacgaaag aagacgtcca
     3721 ttgccggtca cgacacgggc ggtcaggccg cttgccctgg ccatcatctc gtcctgcctg
     3781 ctcgcgccgg cgagccgggc cgcggacaat cccgacagga tcgcggccgc cgtcgatcgc
     3841 gccttccggc cgctcctgaa ggagcacgac gtgccgggga tcgccgtcgc cgtgacggtg
     3901 gacggccggc agcatttctt cagctacggc gtcgccgcga aagaccgcaa tgcgccggtc
     3961 ggcaaggaca cgctcttcga gatcggatcg atcagcaaga cgttcactgc gacgctggtc
     4021 tcctacgcac aggccctcgg caggatttcg ctggacgacc atccggggaa atacatcccg
     4081 cagctgcgcg gcagtgccat cgatgcggcg agcctgctca atctcggcac ctatacggcg
     4141 ggcgggctgc cgctgcagtt ccccgacgcg gtaacgagcc ccgccgggat ggtgccttat
     4201 ctcaggcaat ggaagccgtc cgccgctccc ggcacacagc gccgctactc caaccccagc
     4261 atcggcctcg ccgggcgcat caccgccctg gcgatgcacg gcgacttcgc cgacctcgtc
     4321 gagaccgaga tctttcgcag gctcgggctc ggccacagct acatccgcgt cccagccgcg
     4381 gagacggcaa actatgcctg gggctacaac aaggccggca agccggtcag ggtcaccccc
     4441 ggcgtcctcg atgcggaagc ctatggcgtc aaatccacgg cggccgacat gatccgcttc
     4501 gtcgaggcca acatccggcc cgagacgctc gagatgccga tccggcgcgc ggtcgagggc
     4561 acgcatgtcg gctatttcag gatcggcgag atggtgcagg ggctcggctg ggagcaatac
     4621 ccgtatccgg tcacgctgga acgcctgctg gccggcaact ccaccgggat ggtcatggaa
     4681 agcaatgccg cggcacagct gacgccgcca cgggcgccat cggagccgac cttgttcaac
     4741 aagaccggct cgacgaacgg gttcggcgcc tacgccgctt tcgtgcccgc gacgcggatc
     4801 ggcatcgtga tgctggcgaa caagaatctt ccggttccgg cgcgcatcac cgccgcgcat
     4861 gccgtgctcc agcaattatc cgagaaagcg ccgtagcgct catcgcgttg cgcggctcgg
     4921 gtgaccgggc tcgcgaacgt catgcggccc tcgcgctccg acttcacgcc gtgtagggct
     4981 tgtccgaacc ataaggggag gggacatgct catcatcggc aacgacgtcg tcgcgcaaat
     5041 cctgaccatg ccggactgcc tgcgcgtcca ggaggaggcc ttccgcaagc ttccggccgg
     5101 cggcgccatg caccggccgc gcatcgatat gtattttccg tgcgagcgcg acgacggcta
     5161 tttccgctgg ggctcgatgg aaggcgccaa tgacggcttc ttcgccatcc gcatgaaatc
     5221 ggacatcatc acctggccga agacgcccga cggcggctgg acggaggaca agtattgccg
     5281 cgagcccggc acctattgcg gcatcatctt cctgatctcg acgcgcaacg gcgagccgct
     5341 cgccttcatc aacgacggcg tgctccagca catgcgcgtc ggcggcggcg ccggcatcgg
     5401 caccaaatat ctgtcgcgcg aggactcgca cgtcatcggc atgctgggct ccggcggtat
     5461 ggcgcgcacc tttctcgagg ccttcacgtg cgtccgc
//
LOCUS       DATAIQ010001179         1766 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_86111, whole genome shotgun sequence.
ACCESSION   DATAIQ010001179 DATAIQ010000000
VERSION     DATAIQ010001179.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1766)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1766)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1766
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_86111"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..440
                     /locus_tag="VHN20_19525"
     CDS             <1..440
                     /locus_tag="VHN20_19525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006313839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX2728020.1"
                     /translation="LDTNVTGLVALTRALLPKLIETKGSIINLSSIAGTYPYRGGAVY
                     GATKAFVRQFSLMLRNDLAGTGVRVTSIEPGMAETEFTLVRNGGDQAASDALYAGLDP
                     MTAEDLAETILWVASRPAHLNINSVELMPTRQSWAGFAMTRKA"
     gene            472..933
                     /locus_tag="VHN20_19530"
     CDS             472..933
                     /locus_tag="VHN20_19530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015685590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEX2728021.1"
                     /translation="MSIDQRLAELGLTLPQPAAPVASYVPAVLTGNLLHISGQISFAE
                     DGSLITGRLGENVSLEEGQAAARRCGLMLLAQIKAALGSLDRVSRVVKLGVFVNSASD
                     FTDQPKVANGASDLMQEVFGDAGRHARSAVGVPTLPLGVAVEVDAIVEVRD"
     gene            914..1642
                     /locus_tag="VHN20_19535"
     CDS             914..1642
                     /locus_tag="VHN20_19535"
                     /inference="COORDINATES: protein motif:HMM:NF015000.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008081 - phosphoric diester hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase family
                     protein"
                     /protein_id="HEX2728022.1"
                     /translation="MSRSATDRLFAGSAGFAHRGRHDAAVPENSLAAFRAAIACGAGI
                     ECDVRLSRDGFPIVYHDSSLQRLCGVNRETESVNAATLMDLPLAGTRERIPWLGQLLE
                     LAGPQTPLLVEIKSRQERRDYPYPITRLCRVVAQQIHRHPGPVGVMSFNPMVGAWFAR
                     NAPEIPRGLVIADDLPPWQRWFSLRMAQPTFVAVETLAAARPWIARQRRLGPVASWTV
                     RTAEQRKALQNQVDALIWEGDGRP"
BASE COUNT          287 a          594 c          569 g          316 t
ORIGIN      
        1 tcctcgacac caatgtcacc ggcttggtcg cgcttacccg tgccctgctg cccaagctga
       61 tcgaaaccaa gggatcgatc atcaatctgt cctcaatcgc cggcacttac ccttatcgcg
      121 gaggcgcggt gtacggggcg accaaggcgt tcgtgcgcca gttcagcctg atgctgcgca
      181 acgacctggc cggcaccggc gtgcgcgtga cctcgatcga gcctgggatg gcggaaacgg
      241 agttcaccct ggttcgcaat ggcggcgacc aggccgcgtc cgacgcgctc tatgccgggc
      301 tcgacccgat gaccgccgag gaccttgccg agaccatcct gtgggtggcg agccggccgg
      361 cgcacctcaa catcaattcg gttgagctga tgccgacgcg gcagagctgg gccggctttg
      421 cgatgacccg caaggcttga cctcgctcgc ccgggcggac acgggcagcg catgtcgatc
      481 gatcaacgcc tggccgagct cggcctcacc ctgccccagc ctgccgcgcc cgtggcctcc
      541 tatgtgccgg ccgttctgac cggcaatctg ctgcacatct ccggccagat cagctttgcc
      601 gaggacggca gcctgatcac cggccggctg ggcgagaacg tcagcctgga agaaggtcag
      661 gcggcggcgc ggcgctgcgg tctgatgctc ttggctcaga tcaaggcggc cctcggctcg
      721 ctcgatcggg tgagccgggt cgtgaagctc ggcgtattcg tcaattcggc cagcgacttc
      781 accgatcagc cgaaggtcgc caacggcgcc tcggacctca tgcaggaggt gttcggcgat
      841 gccggccgcc acgcccgctc ggccgttggc gttccgaccc tgccgctcgg cgttgccgtc
      901 gaggtggacg cgattgtcga ggtccgcgac tgaccgcctg tttgcgggtt ctgccggctt
      961 cgcacatcgc ggccggcatg acgccgccgt tccggaaaac agtttagcag ccttccgcgc
     1021 agcaatcgcc tgcggggcag gtatcgagtg cgatgttcgg ctttctcgcg acggctttcc
     1081 gatcgtctac cacgacagca gcctgcagcg gctgtgcggc gtcaatcgag agacggaaag
     1141 cgtcaacgca gcgaccctga tggacctgcc tctagcgggg acgagagaac ggatcccgtg
     1201 gcttggacag ctgcttgagc ttgcgggtcc tcagactccc ttgctggtgg agatcaagtc
     1261 gcgtcaggag cggcgcgatt acccttatcc catcacccgc ttgtgccgcg tcgtagcgca
     1321 acagatccat cgtcatcccg gacccgtcgg ggtcatgagc ttcaatccga tggtcggcgc
     1381 ctggttcgcc aggaatgcac cggagatccc gcgcgggctg gtcatcgcgg acgacctccc
     1441 gccctggcaa cgatggttct cgctccgcat ggctcagccg accttcgttg cagtggagac
     1501 cttggcagcg gcccggcctt ggatcgcacg acagcggcgg cttggaccgg tcgcaagctg
     1561 gaccgttcgg accgccgaac agcgcaaggc ccttcagaat caggtggatg cgcttatctg
     1621 ggaaggcgat ggccgaccgt agtcccgccc atatccgtat cgccgacagc ataggccaaa
     1681 tcgatgcggc ggcgtgggat gcccacgccg gcagcgacga tccctttctt tcccacgcct
     1741 tcctgtcagc actcgaagag agcggg
//
LOCUS       DATAIQ010001180         1647 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_182529, whole genome shotgun sequence.
ACCESSION   DATAIQ010001180 DATAIQ010000000
VERSION     DATAIQ010001180.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1647)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1647)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1647
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_182529"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(341..718)
                     /locus_tag="VHN20_19540"
     CDS             complement(341..718)
                     /locus_tag="VHN20_19540"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX2728023.1"
                     /translation="MSSILLVDDHLSVRCSVGDVLRDAGYDVSEAADAAQALKLLERR
                     SFDLLIVDYLLPEMKGDAIARIARERWPNLRVIFLSGYAEFLSLTGKSGDNTLIQKPI
                     SVDALCKAVAGALRGPTSLRSAA"
     gene            complement(742..942)
                     /locus_tag="VHN20_19545"
     CDS             complement(742..942)
                     /locus_tag="VHN20_19545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2728024.1"
                     /translation="MTQQPRAPDERQGEAAIEQTVLSDADLLVAIRRELLRVYAELLN
                     ETVPDRVARVVERLDAETKPGT"
     gene            1258..>1647
                     /locus_tag="VHN20_19550"
     CDS             1258..>1647
                     /locus_tag="VHN20_19550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2728025.1"
                     /translation="MSTDKPPNAGKGRKAGSRNKTPAALKEAILHAFDEVGGKSYLAE
                     LARKDHRTFCALLGRILPRSLPDAAGEEDNSIVVEIVHETHEPRVPDLASDPFWAREL
                     AQKKLISGYDPGAPEKAAQSNRTGQAAL"
BASE COUNT          279 a          530 c          577 g          261 t
ORIGIN      
        1 ggcacaaggc cggtgatgac ggtgagggcc aggctcagta ttttgctgag aatctggtgg
       61 ccgcgcggcc tgcgcgttcg cgatcgacgg gccgtcgcgc agatggagcg ctcagtattt
      121 tgctgagaat ctggtggggc cgccgtcgtt gtcatggccg ggcttgtccc ggccatcccg
      181 attggaaagg cggtgcctta ccgatcggga tcaccggcac aaggccggtg acgacagggt
      241 gaggggccgg gagcccgttc ggtatggcag cgtatggcgc cgtacgcccg cacgcggccg
      301 cggccgcgaa tgcgttgagc gtcgcggcgc gcggccgccg ctacgccgcg gagcgcagcg
      361 acgtcggccc gcgcagcgcg cccgcgaccg ccttgcacag cgcgtcgacg ctgatcggct
      421 tctggatgag cgtgttgtcg ccgctcttgc cggtcagcga caggaactcg gcgtagccgg
      481 acaggaagat gacccgcagg ttcggccagc gctcgcgggc gatgcgcgcg atcgcgtcgc
      541 ccttcatctc cggcagcagg tagtcgacga tcaggaggtc gaacgaccgc cgctcgagca
      601 gttttaaggc ctgcgcggcg tcggccgcct ccgacacgtc gtagcccgcg tccctgagca
      661 cgtcgccgac gctgcagcgg acggagagat gatcgtcgac aagcagaatt gaactcatgt
      721 tacttcccgt ctcccgcccg ctcacgtgcc gggcttcgtt tcggcgtcca gccgctccac
      781 caccctggcg acgcggtccg gaacggtttc attgagaagc tccgcataca cgcgaagaag
      841 ttcgcgtcgg atcgccacca gaaggtcggc gtccgacagc acagtttgtt cgatggcggc
      901 ttcgccttgg cgctcgtccg gcgctcttgg ttgttgtgtc attctgggcc gcctgggcgc
      961 gaaggtcggc gacaatcgtt aacattgcgt taacgggtgt taacggggcc gcgcagtggc
     1021 ggtggagatg cacaggcatt ttcggcagcg gcaggcgcct ccggcccgct aacttgttga
     1081 agacaaacgg cctccgccgg cgagcgccgt cgcgcattcg gtttcggcgg catggccagg
     1141 ctgtgcaaaa cgccgaatgt ggggaacgcg ggcaacgctg ggacaggcgc ggccgcggct
     1201 ggttccgcgc ccgggaaacc ctgccatgat gatggcgcca gaaggagtgt cgtcaccatg
     1261 agcactgaca aaccgccgaa tgccggcaag ggccgcaaag ccgggtcacg caacaagacc
     1321 ccggccgcgc tgaaggaggc catcctgcac gccttcgacg aggtcggcgg caagtcctac
     1381 ctcgccgagc tcgccaggaa ggaccacagg accttctgcg cgctgctcgg ccggatcctg
     1441 ccgcgcagcc tcccggacgc ggccggcgag gaggacaaca gtatcgtcgt ggagatcgtg
     1501 catgagacgc acgagccgcg cgtgccggac ctggcttcgg acccgttttg ggcccgggag
     1561 ctggcccaga agaagctcat aagcggctat gacccggggg cgccggagaa ggcggctcaa
     1621 agcaaccgca cagggcaagc agcactc
//
LOCUS       DATAIQ010001181         3012 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_182670, whole genome shotgun sequence.
ACCESSION   DATAIQ010001181 DATAIQ010000000
VERSION     DATAIQ010001181.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3012)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3012)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3012
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_182670"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..801)
                     /locus_tag="VHN20_19555"
     CDS             complement(<1..801)
                     /locus_tag="VHN20_19555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2728026.1"
                     /translation="MRWCTDPVLRVEHLTMRFGGLVAVCDLSFEAGRGDITAIIGPNG
                     AGKTTVFNCITGFYRASEGMISLHHEGGAHYLLERLPGHRVAWKARVARTFQNIRLFS
                     GMTVLENLLVAQHNPLMIASGFTFLGVLGLGTYRHAERAAVEKATFWLDKIGLTDRAD
                     DPAGDLPYGAQRRLEIARAMCTDPVLLCLDEPAAGLNPRESRELNQLLLSIRADHRTS
                     ILLIEHDMSVVMEISDHVIVLDYGTRIADGTPTEIENDQRVIAAYLGVE"
     gene            complement(801..2210)
                     /gene="livM"
                     /locus_tag="VHN20_19560"
     CDS             complement(801..2210)
                     /gene="livM"
                     /locus_tag="VHN20_19560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009494113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015658 - branched-chain amino acid
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="high-affinity branched-chain amino acid ABC
                     transporter permease LivM"
                     /protein_id="HEX2728027.1"
                     /translation="MDAPPSTVATPARVSVAINADLAAALKDAAITALVTFGLCLPII
                     AYRTDQSMDNQLILRPRWGLVALFCALAFALRLIFRMLSHRRHVARARPQALATHRAD
                     LSLFQRAGKLGLPLFMGIALTFPLLVYLGKGGLSESRYWVDLGILILTYVMLGWGLNI
                     VVGLAGLLDLGYVAFYAVGAYSYALLSTKFGLSFWICLPVAGILAAFWGILLGFPVLR
                     LRGDYLAIVTLAFGEIIRLVLINWVDLTNGYAGITSIPRVTFFGIPFNSDDNGFANLF
                     GLEFNAMHRIVFLYYLILGLALVTNFVTLRLRKLPVGRAWEALREDEIACRSLGINTT
                     NTKLTAFAMGAMFAGFAGSFFAVRQGFVSPESFNFLESAIILAIVVLGGMGSQFGVAI
                     AAVALIGGPELLRNLEFLKAVFGPGFDPNEYRFLIFGLAMVAMMVWRPRGLIAQRQPS
                     LVLKERKAIAGSFVKEGHG"
     gene            complement(2220..>3012)
                     /locus_tag="VHN20_19565"
     CDS             complement(2220..>3012)
                     /locus_tag="VHN20_19565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006471258.1"
                     /note="LivHMGF is the membrane component of the LIV-I/LS
                     branched-chain amino acid transporter; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease LivH"
                     /protein_id="HEX2728028.1"
                     /translation="FMLSAFIAMIFFLLLTTWLGIGSVALALFIVLLIAMVLTALWGW
                     ALERLAYRPLRGSFRLAPLISAIGVSIFLANFVQVAQGARNKATDPMVREVIPLFERN
                     GYVVALSYKQVIIMTVTAVLLAVFWYLVQKTALGRAQRACEQDRKMAALLGIDVDRTI
                     SLTFVIGAALAAVAGTMYLLNYGVVSFADGFVPGIKAFTAAVLGGIGSLPGAVLGGLI
                     IGLVETMWSAYFSIEYKDVAAFSLLIIVLVFMPSGILGRPEVEKV"
BASE COUNT          588 a          945 c         1077 g          402 t
ORIGIN      
        1 ctcgacgccg agataggcgg cgatgacgcg ctgatcgttc tcgatctcgg tgggcgtgcc
       61 gtcggcgatc ctggtgccgt agtcgagcac gatcacatgg tccgagatct ccatcaccac
      121 cgacatgtcg tgctcgatca agaggatcga ggtgcgatgg tcggcgcgga tcgacagcag
      181 aagctggttc agctcgcggc tctcgcgcgg gttgaggccg gcggcgggct cgtcgaggca
      241 cagcaaaacc gggtcggtgc acatggcgcg ggcgatctcg agccgccgct gcgcgccgta
      301 gggaaggtcg ccggcgggat cgtcggcgcg gtcggtgagc ccgatcttgt cgagccagaa
      361 cgtagccttc tcgacggcgg cgcgctcggc atggcggtag gtgccgagcc cgagaacgcc
      421 aagaaaggtg aagcccgacg cgatcatcag cgggttgtgc tgcgcgacca gcaggttctc
      481 gaggaccgtc atgcccgaga acaggcggat gttctggaag gtgcgcgcga cgcgcgcctt
      541 ccaggcgacg cggtgcccgg gcaggcgctc gagcaggtag tgggcgccgc cctcgtggtg
      601 cagggagatc atgccttccg acgcccggta gaagccggtg atgcagttga acaccgtcgt
      661 cttgccggcg ccgttcgggc cgatgatcgc ggtgatgtcg ccgcgccccg cctcgaacga
      721 cagatcgcag acggcgacca gcccgccgaa gcgcatcgtc agatgctcga cgcggagcac
      781 cgggtcggtg caccagcgca tcagccgtgc ccttccttga cgaaggagcc ggcgatcgcc
      841 ttgcgctcct tgagcacgag ggacggctgg cgctgcgcga tcaggccgcg cggccgccac
      901 accatcatgg ccaccatggc gaggccgaag atcaggaagc gatactcgtt gggatcgaag
      961 cctggcccga agaccgcctt caggaactcc aggttgcgca ggagctcggg gccgccgatc
     1021 agcgccacgg cggcgatggc gacgccgaat tgcgagccca tgccgccgag caccacgatc
     1081 gcgaggatga tcgccgactc gaggaagttg aagctttccg gcgagacgaa gccctggcgc
     1141 accgcgaaga acgagccggc gaagccggcg aacatggcgc ccatggcgaa ggcggtgagc
     1201 ttggtgttgg tggtgttgat gccgagcgag cggcacgcga tctcgtcctc gcgcagggct
     1261 tcccaggcac ggccgaccgg cagcttgcgc aggcgcaagg tgacgaagtt cgtgaccagc
     1321 gcgaggccca ggatcaggta gtagaggaag acgatccggt gcatcgcgtt gaactcgagc
     1381 ccgaacaagt tggcgaagcc gttgtcgtcg gagttgaacg ggatgccgaa gaacgtcacc
     1441 cgcgggatcg acgtgatgcc ggcgtagccg ttggtgaggt cgacccagtt gatcagtacg
     1501 aggcggatga tctcgccgaa ggcgagcgtg acgatggcga ggtagtcgcc gcgcaggcgc
     1561 agcacgggaa aaccgagaag gatgccccag aaggcggcca ggatgccggc cacgggaagg
     1621 cagatccaga acgagagacc gaacttcgtc gagagcagcg cgtacgaata ggcgccgacc
     1681 gcatagaagg cgacgtagcc gagatcgagc agcccggcga ggccgacgac gatgttgagg
     1741 ccccagccga gcatcacgta ggtgaggatc aggatgccga ggtcgaccca gtagcgcgac
     1801 tcgctgaggc cgcccttccc gagatagacg agcagcggga aggtgagggc gatgcccatg
     1861 aacagcggca ggccgagctt gccggcgcgc tggaacaggc tgagatcggc acgatgcgtg
     1921 gccagggcct gcggccgcgc cctcgccacg tggcggcggt gcgagagcat gcggaagatc
     1981 aggcgcaacg cgaaagccag cgcgcagaac agcgccacca gcccccagcg cgggcgcagg
     2041 atcagctggt tgtccatgct ctggtcggtg cggtaggcga tgatcgggag gcacaggccg
     2101 aacgtcacca gcgccgtgat tgccgcatcc ttgagcgcgg cggcgagatc ggcgttgatc
     2161 gcgaccgaga cccgtgcggg cgtcgccacc gtgctggggg gagcgtccat cgccgacgcc
     2221 tagaccttct cgacctcggg ccgcccgagg atgccggacg gcatgaagac gagcacgatg
     2281 atcagcagcg agaacgccgc gacatccttg tattcgatcg agaagtaggc cgaccacatg
     2341 gtctcgacga ggccgatgat gaggccgccc agaaccgctc ccggcagcga gccgatgccg
     2401 ccgagcaccg cggccgtgaa cgccttgatg ccgggcacga agccgtcggc gaaactgacg
     2461 acgccatagt tgagcaggta catggtgccc gcgaccgcag ccagggcagc gccgatcacg
     2521 aaggtcagcg agatcgtgcg gtccacgtcg atgccgagca gcgccgccat cttgcggtcc
     2581 tgctcgcagg cccgctgggc gcggcccagc gccgtcttct gcaccagata ccagaagacc
     2641 gcgagcagca ccgcggtcac ggtcatgatg atgacctgct tgtaggagag cgccaccacg
     2701 tagccgttgc gctcgaacag cgggatcacc tcgcgcacca tcgggtcggt cgccttgttg
     2761 cgcgcgcctt gcgccacctg gacgaagttg gccaggaaga tcgagacgcc gatcgccgag
     2821 atcagcggcg ccagccggaa ggagccgcgc agcggccggt aagcgagccg ctccagcgcc
     2881 caaccccaca acgccgtcag caccatggcg atgaggagca cgatgaacag ggccagcgcc
     2941 accgagccga tcccgagcca ggtcgtcagc agcaggaaga agatcatggc gatgaaggcg
     3001 ctcagcatga ac
//
LOCUS       DATAIQ010001182         2057 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_86253, whole genome shotgun sequence.
ACCESSION   DATAIQ010001182 DATAIQ010000000
VERSION     DATAIQ010001182.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2057)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2057)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2057
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_86253"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..367
                     /locus_tag="VHN20_19570"
     CDS             <1..367
                     /locus_tag="VHN20_19570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018428559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEX2728029.1"
                     /translation="NGNVGAVGFCWGGGIVNAVAVAAGSSLKAAVPYYGAQPKAEDAA
                     KIKADLLLHYAGEDERINAGIPAYKEALEKSGVKHQVFVYEGAQHAFNNDTSEARYDK
                     KSADLAWSRTTSFLKEKLG"
     gene            complement(516..1529)
                     /locus_tag="VHN20_19575"
     CDS             complement(516..1529)
                     /locus_tag="VHN20_19575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2728030.1"
                     /translation="MTIDAKAAARSAAIMLAGCLAALPAYAQSPAPAAAASGTGQAQK
                     RIVTQGFATTVVDNLFRCEVKVSNHRISGVGTITASDGTTLTVPAATDFQKGPRIADL
                     FNECNKVTPERFADVRDADVPVVEIDSDGEVVTGYIVADNYYEFYVNGKLVGVDPVPF
                     TPFNSGIVKFKAKRPYTYALKLVDWEEKLGVGMEKMPDNDWHPGDGGVIARFSDGTVT
                     DSSWKAQSFYIAPLASPDDVVEKGSVHDTTKLGRVHPLRTKPSCQERCYAVHYPIPET
                     WASASFDDRAWPRAYEYTDEDIGVTTLTAYTRYPEAFEGARWIWTLNLVYDNLVLARK
                     TVR"
     gene            complement(1579..>2057)
                     /locus_tag="VHN20_19580"
     CDS             complement(1579..>2057)
                     /locus_tag="VHN20_19580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013165031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HEX2728031.1"
                     /translation="GPQVMNERPELFWGMVASMWVGNLMLVIINLPLIGVWVQFLRVP
                     YRLLYLVILMSCAIGVYTVNNSGFEVLLAALFGALGYVFIRLECEPAPMLLGFVLGPM
                     MEENLRRAMRISSGDPMIFVERPISLTLLIAALALLIVIMLPAIRAKREEVFQEET"
BASE COUNT          343 a          669 c          698 g          347 t
ORIGIN      
        1 caacggcaat gtcggcgccg tcggtttctg ctggggcggc ggcatcgtca atgcggtcgc
       61 ggtcgcggcg ggctcgtcgc tcaaggccgc cgtgccgtat tacggagccc agccgaaggc
      121 cgaggacgcg gccaagatca aggccgacct gctgctgcat tacgccggcg aggacgagcg
      181 catcaacgcc ggcatcccgg cctacaagga ggcgctcgag aagagcgggg tcaagcacca
      241 ggtcttcgta tacgagggcg cccagcacgc cttcaataac gacaccagtg aagcgcgcta
      301 cgacaagaag tcggccgacc tcgcctggtc gcgcaccacc agcttcctca aggagaagct
      361 gggctgacgc tatccctcct agcgaggggc gggcgggctc gggtgcgcga gcacccgagc
      421 ccggtggggt ggcagcgaac acatgagccg tgggtggtgc cgccccgccc cggtcgctat
      481 cgcgaatcga ccctaccttc gcggggaggg atgagctacc gcaccgtctt ccgcgccagg
      541 acgaggttgt cgtagacgag gttgagcgtc cagatccagc gcgcaccctc gaacgcttcc
      601 gggtagcgcg tgtaggcggt gagggtcgtc acgccgatat cctcgtcggt gtattcgtag
      661 gcacgcggcc aagcgcggtc gtcgaacgag gccgacgccc acgtctcggg gatcggataa
      721 tgcaccgcgt agcagcgctc ctggcaactc ggcttggtgc gcagcgggtg cacgcggccg
      781 agcttggtcg tgtcgtgcac gctgcccttc tcgacgacgt catcggggct cgccaggggc
      841 gcgatgtaga aggattgcgc tttccagctg ctgtcggtga cggtgccgtc gctgaagcgc
      901 gcgatgacgc cgccgtcgcc gggatgccag tcgttgtccg gcatcttctc catgccgacg
      961 ccgagcttct cctcccagtc gacgagcttc aacgcgtagg tgtacgggcg cttcgccttg
     1021 aacttgacga tgcccgagtt gaacggcgtg aacggcaccg ggtcgacgcc gacgagcttg
     1081 ccgttgacgt aaaactcgta ataattgtcg gcgacgatgt agccggtgac cacttcgccg
     1141 tcggagtcga tctcgaccac cggcacgtcg gcatcgcgga cgtcggcgaa gcgctccggc
     1201 gtgaccttgt tgcactcgtt gaacaggtcg gcgatcctgg ggcccttctg gaagtcggtc
     1261 gccgccggta cggtcagcgt ggtgccgtcg ctcgcggtga tcgtgccgac gccgctgatg
     1321 cggtggttgc tgaccttgac ctcgcagcgg aacaggttgt cgacgaccgt ggtggcgaag
     1381 ccttgcgtca cgatgcgctt ttgcgcctgg cctgtgccgg acgcggctgc ggcgggcgcc
     1441 gggctctgcg cataggccgg cagcgcggcc agacatccgg caagcataat ggccgcgctc
     1501 ctcgcggcgg ccttcgcgtc gatggtcatg gcgtcctccc tcgttgcttg ttcgtgcacg
     1561 agcgcgcgcc cgtcacgttc aggtttcctc ctgaaagacc tcttcgcgct tggcccggat
     1621 cgccggcagc atgatcacga tcagcagcgc cagggcggcg atcagaagcg tgaggctgat
     1681 cggccgctcg acgaagatca tcgggtcgcc gctcgagatg cgcatggcgc ggcgcaggtt
     1741 ctcctccatc atcgggccga gcacgaaacc gagcagcatc ggggccggct cgcattcgag
     1801 ccggatgaag acgtagccga gcgcgccgaa cagcgccgcc agcagcacct cgaagccgct
     1861 gttgttgacc gtgtagacgc cgatcgcgca cgacatcagg atcacgagat agagcagccg
     1921 gtaaggcacc ctcaggaact gcacccagac gccgatcagg ggcaggttga tgatcacgag
     1981 catcaggttg cccacccaca tgctggcgac catgccccag aacagttccg gccgctcgtt
     2041 catcacctgc gggccgg
//
LOCUS       DATAIQ010001183         2846 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_182925, whole genome shotgun sequence.
ACCESSION   DATAIQ010001183 DATAIQ010000000
VERSION     DATAIQ010001183.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2846)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2846)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2846
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_182925"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..229
                     /locus_tag="VHN20_19585"
     CDS             <1..229
                     /locus_tag="VHN20_19585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008934509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2728032.1"
                     /translation="LVTHDLEEAIALSDRVYLLSQGPRAHISQCYTIPIPRPRNLMKA
                     RAHPKFGPLLERLWSDLSQAVDGSGRIAEAA"
     gene            226..978
                     /locus_tag="VHN20_19590"
     CDS             226..978
                     /locus_tag="VHN20_19590"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX2728033.1"
                     /translation="MTILGRVWVRQLLALSVALALWEGAGQAGWLNPLFFPAPSRIAA
                     ALVELFSQGTIWTHLQATFAAAIGGLVLGIAVGVVLGSLAALIKPLAELLEPVMMMLN
                     AVPRVVLAPLCVIWFGIDLGSKIALAFVLVAVLVFFTVYTGIKQVDRRLVERVRTLGG
                     GRWTILREVYLPFVTAWIMGNLKVAVGFAFTGAVVGEFVGASRGLGYLLSFAQSTYNA
                     ALMMAIVLLIMVFVLAIFAAAGRLESYLLRWR"
     gene            1028..1405
                     /locus_tag="VHN20_19595"
     CDS             1028..1405
                     /locus_tag="VHN20_19595"
                     /inference="COORDINATES: protein motif:HMM:NF040913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SaoD/DsrE family protein"
                     /protein_id="HEX2728034.1"
                     /translation="MKVAYVFATSNAATFKLATMILPQLEAGTHGAQVIGMIFFDDNV
                     FALRQDDPVGERLAALAKKHNILLMVCDQCALRRNLADGDFEGCGTGSVKAKGLVDGV
                     VAGCFPQLYGALGQNPPDQVITL"
     gene            1584..2573
                     /locus_tag="VHN20_19600"
     CDS             1584..2573
                     /locus_tag="VHN20_19600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018856974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX2728035.1"
                     /translation="MRRVKLTIATTDYDHFRDFRLGHVQAEGVDHTWLTLGHHEIFAR
                     FTLNREWDVSELSFAKFMTQITRDDSDIVGLPVICSRLFRFSSFYVNKKSGIKTPEDL
                     KGKKVGSPEWAHSAAVYMRGWLHNDVGVKLTDVHWYQAGANDAGRVEKVELNLPEGLK
                     LTRVSDKSLSEMLASGEIDCAIIARPPTCFLQGHPDVVRLFPDFLDMEEEYFRKTKVW
                     PIMHIIAMQKHIVDENPWIARNLYNAFQESKRRSLERLLDPAVSRYPLAWVPQYARKM
                     RDMFDGDPFPFGIEENRPTLEQLALYAYQQGIAHRQAKPEELFPAGIMTKIVI"
BASE COUNT          459 a         1001 c          874 g          512 t
ORIGIN      
        1 cctcgtcacg cacgatctgg aagaggccat cgccctctcg gatcgcgtct atctgctgtc
       61 gcagggaccg cgcgcgcata tctcgcagtg ctacacgatc ccgatcccgc gcccgcgcaa
      121 cttgatgaag gcgcgcgcgc acccgaaatt cggcccgctg ctcgagcggc tgtggtccga
      181 cctctcgcaa gcggtcgacg gttcgggccg catcgcggag gccgcatgac catccttggc
      241 cgggtctggg tccggcaact cctcgcgctc agcgtcgccc tcgccttgtg ggaaggtgcc
      301 ggccaggccg gctggctcaa cccgctgttc tttccggcgc cgagccgcat cgcggcggcg
      361 ctggtcgagc tgttctcgca aggcacgatc tggacgcatc tccaggcgac cttcgcggcg
      421 gcgatcggcg ggctcgtcct cggcatcgcc gtcggcgtcg tgctcggctc cctggcggcc
      481 ctgatcaagc cgctcgccga gctgctcgag cccgtgatga tgatgcttaa cgccgtaccg
      541 cgcgtcgtgc tggcgccgct ctgcgtaatc tggttcggca tcgatctcgg ctcgaagatc
      601 gccctcgcct tcgtgctcgt cgcggtgctc gtcttcttca cggtctatac cggcatcaag
      661 caagtggacc gccgtctcgt cgaacgtgtg cggacgctcg gcggcggccg ctggacgatc
      721 ctgcgcgagg tctaccttcc gttcgtgacc gcctggatca tgggcaacct caaggtcgcg
      781 gtcggcttcg ccttcacggg cgcggtggtc ggcgagttcg tcggcgccag ccgcggcctc
      841 ggctatctcc tgtccttcgc gcagagcacc tacaacgcgg cgctgatgat ggcgatcgtg
      901 ctgctgatca tggtgttcgt gctcgccatc ttcgccgctg ccggccggct cgaaagttat
      961 cttctgcgct ggcgctgacc cgcggccccg cccctccccc ctgccctttg tccgacggag
     1021 tattccgatg aaggtcgcct acgtgttcgc caccagcaat gccgcgacct tcaagctcgc
     1081 gaccatgatc ctgccgcagc tcgaggccgg cacgcacggc gcgcaggtga tcggcatgat
     1141 cttcttcgac gacaacgtgt tcgccctgcg ccaggacgat ccggtcggcg agcggctcgc
     1201 cgcgctcgcc aaaaagcaca acatcctcct gatggtgtgc gaccagtgcg ccctgcgccg
     1261 caacctcgcc gatggcgatt tcgagggctg cggcaccggt tcggtaaagg ccaaggggct
     1321 ggtcgacggg gtggtggccg gctgcttccc gcagctttac ggcgccctcg gccagaaccc
     1381 gcccgaccag gtcatcaccc tctgatcccg gtggaccgcc cgcctgatcg ccccgcctgc
     1441 ctccgaccca ccgggaccgc ctggtttcat cgtaacatga aggctttgcc gcaaccggcg
     1501 gcaaaaccgg tttgcccttg gcggttcccg cgctaaagcg gtgcccgacc ggcaacaagg
     1561 ccaagaccgt caaaggggga ccaatgaggc gcgtgaagct caccatcgca acgaccgatt
     1621 acgaccattt ccgtgatttc cgcctcggcc acgtgcaggc cgaaggggtc gaccacacct
     1681 ggctgacgct cggccaccac gagatcttcg cccgcttcac cctcaaccgc gaatgggacg
     1741 tgagcgagct gtccttcgcc aagttcatga cgcagatcac ccgtgacgat tccgacatcg
     1801 tcggtctgcc ggtgatctgc tcgcgcctgt tccgcttctc ctcgttctac gtgaacaaga
     1861 agagcggcat caaaaccccc gaggacctca agggcaagaa ggtcggctcg ccggaatggg
     1921 cgcattcggc cgcggtctac atgcgcggct ggctgcacaa cgacgtcggc gtcaagctga
     1981 ccgacgtgca ctggtaccag gccggcgcca acgacgccgg ccgcgtcgag aaggtcgagc
     2041 tcaacctgcc cgaggggctc aagctgacgc gtgtgtcgga caagtcgctc agcgagatgc
     2101 tcgcgtccgg cgagatcgat tgcgccatca tcgcgcgccc tccgacctgc ttcctgcagg
     2161 gccatcctga cgtggtgcgg ctgttcccgg acttcctcga catggaagag gagtatttcc
     2221 gcaagaccaa ggtctggccg atcatgcaca tcatcgcgat gcagaagcac atcgtcgacg
     2281 agaatccgtg gatcgcccgc aatctctaca acgccttcca ggaatcgaag cgccgcagcc
     2341 tcgagcgcct gctcgacccg gcggtgtcgc gctatccgct cgcctgggtg ccgcaatacg
     2401 cgcgcaagat gcgtgacatg ttcgacggcg acccgttccc gttcggcatc gaggagaacc
     2461 gcccgaccct cgagcagctg gcgctctacg cttatcagca gggcatcgcc caccgccagg
     2521 ccaagccgga ggagctcttc cccgccggca tcatgaccaa gatcgtgatc tgacccacac
     2581 ccctgtcatg gccgggctcg tcccggccat cccgatcgga agagctcgca aaatcgggat
     2641 aaccggcata aagccggtga tgacaacgcg aaggagcgtg cgtcgcccta gtcgagcttg
     2701 aacaccgtct tcaagacctc cttgacggcc tgcttggccg cagtggtggc ggccgggtca
     2761 tggcccgtat gcggatcgcg ctcgacgcag ggatccttgt aggtgaacgg ttccctggtg
     2821 gcggcgttga cgagctcccc caccgg
//
LOCUS       DATAIQ010001184         1532 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_183187, whole genome shotgun sequence.
ACCESSION   DATAIQ010001184 DATAIQ010000000
VERSION     DATAIQ010001184.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1532)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1532)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1532
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_183187"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..485
                     /locus_tag="VHN20_19605"
     CDS             <1..485
                     /locus_tag="VHN20_19605"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX2728036.1"
                     /translation="RAARAVGLDANHAMLSVARANLEREGVRAELRQGDIHAPPFARG
                     SFDLVVIHQVLHYLDDPVRALREAAHLVAPGGRLLIVDFAPHNLEFLRESQAHRRLGF
                     APEQVAGWLQEAGLDCTLTRELAPPKKADDQLTVTLWVGQDRRVVTDWPLTASNREVA
                     "
     gene            485..1396
                     /gene="metF"
                     /locus_tag="VHN20_19610"
     CDS             485..1396
                     /gene="metF"
                     /locus_tag="VHN20_19610"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012334097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004489 - methylenetetrahydrofolate
                     reductase (NAD(P)H) activity [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase [NAD(P)H]"
                     /protein_id="HEX2728037.1"
                     /translation="MTAFRLSRHSARPIQVSFEFFPPKTAEMEATLWSSIERLAPLNP
                     HFVSVTYGAGGSTRERTHATVARILKETPLKPAAHLTCVAATREDLNEVVRAYWDCGV
                     RHIVALRGDPAAGLGAAYEPHPGGYAQSCDLVAGIKGVGDFEVSVSAYPEKHPESPSF
                     EADLDVLKAKVDAGATRAITQFFFDNDLYFRFLDKVRGRGIDIPVVPGILPVQNFKQA
                     ANFAARAGASVPDWLAHRFDGLEQDVETRKLIAAAVTAEQVIDLVDRGVTEFHFYTMN
                     RADLVYAICHLLGLRAQPQATSEKAAA"
BASE COUNT          244 a          557 c          500 g          231 t
ORIGIN      
        1 cgcgcgcggc ccgcgccgtc ggcctcgacg ccaaccacgc catgctgtcg gtggctcgcg
       61 ccaacctcga acgggagggc gtgcgcgccg agctcaggca gggcgacatc cacgcgccgc
      121 ccttcgcgcg cggctcgttc gacctcgtcg tcatccatca ggtgctgcat tatctcgacg
      181 atccggtgcg ggcgctgcgc gaagctgcgc acctcgtcgc accgggcgga cgcctgctca
      241 tcgtcgactt cgcgccgcac aacctcgagt tcctgcgtga gagccaggcc caccggcgcc
      301 ttggcttcgc gcccgagcag gttgcagggt ggctgcagga ggccgggctg gactgcacgc
      361 tgacgcgcga actggcgccg ccgaaaaaag ccgatgatca gctcacggtg acactgtggg
      421 tcgggcagga ccggcgcgtc gtgaccgact ggccgctgac cgcgtccaac cgcgaggtcg
      481 cgtgatgacc gccttccgcc tcagccggca cagcgcccgc ccgatccagg tctcgttcga
      541 gttcttcccg ccgaagacgg cggagatgga ggcgacgctc tggtcctcga tcgagcgcct
      601 ggcgccgctc aatccgcact tcgtctcggt gacctacggc gccggcggct cgacccgcga
      661 gcgcacgcac gccaccgtcg cgcgcatcct gaaggagacg ccgctcaagc cggccgcgca
      721 cctcacctgc gtcgccgcca ccagggagga cctcaacgag gtcgtccgcg cctactggga
      781 ttgcggcgtg cgtcacatcg tggcgttgcg cggggatccg gcggcagggc tcggcgcggc
      841 atacgagccg catcccggcg gctacgcgca gagctgcgat ctcgtcgccg gcatcaaggg
      901 ggtcggcgat ttcgaggtct cggtgtcggc ctacccggaa aagcatccgg aatcgccttc
      961 gttcgaagcc gatctcgacg tcctcaaggc caaggtggac gccggcgcga cccgcgccat
     1021 cacccagttc ttcttcgaca acgacctcta cttccgcttc ctcgacaagg tgcgcggcag
     1081 gggcatcgac attcccgtcg tgcccggcat cctgccggtg cagaatttca agcaggccgc
     1141 caactttgcc gcgcgggccg gcgccagcgt cccggattgg ctggcgcacc gcttcgacgg
     1201 gctggagcag gacgtcgaga cgcgcaagct gatcgccgcc gccgtcaccg ccgagcaggt
     1261 catcgacctc gtcgaccgcg gtgtcaccga attccacttc tacacgatga accgcgccga
     1321 tctcgtctac gcgatttgcc acttgctggg cctgcgtgcg cagccacaag cgaccagcga
     1381 gaaggcggcg gcctgagacc gatgaccgac atcaagcttg ccgacggcac cgaaatcgaa
     1441 aagacgctgc gcgccgccgc ggccgagcgc atcctcgtgc tcgacggtgc catgggcacc
     1501 gagatccagg ccctgaaact gtcggaggag tc
//
LOCUS       DATAIQ010001185         3539 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_183471, whole genome shotgun sequence.
ACCESSION   DATAIQ010001185 DATAIQ010000000
VERSION     DATAIQ010001185.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3539)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3539)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3539
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_183471"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1..133
                     /locus_tag="VHN20_19615"
                     /pseudo
     CDS             1..133
                     /locus_tag="VHN20_19615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017266870.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
     gene            complement(166..477)
                     /locus_tag="VHN20_19620"
                     /pseudo
     CDS             complement(166..477)
                     /locus_tag="VHN20_19620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015928864.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit A"
     gene            complement(770..1372)
                     /locus_tag="VHN20_19625"
     CDS             complement(770..1372)
                     /locus_tag="VHN20_19625"
                     /inference="COORDINATES: protein motif:HMM:NF015639.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
                     /protein_id="HEX2728038.1"
                     /translation="MTKALNPATDAGRIVETAEPRASARAVPTKALKPARKAVKPATE
                     PETIVKDDQPRTYFDCNKCPAFCCSIYDRVRVTKRDVNRLAKHFNVPYEVALRRYTKD
                     HDGERVLKRVPDHIFPKTCMFLDQHTRRCTIYTARPAPCREYPNRSRCAYYDLLQFER
                     QQQGQDSIMPVIELTFRKVGRVKVDGQDGPEKRWTWGEVE"
     gene            complement(1750..2484)
                     /locus_tag="VHN20_19630"
     CDS             complement(1750..2484)
                     /locus_tag="VHN20_19630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015930320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEX2728039.1"
                     /translation="MTHPLVRKLELFAPLSDEEKRVLEKAPWRIREYGADEDVLSEGD
                     RASESTLVLDGFSCRYKLLPDGRRQITSFNIAGDFVDLHSFLLKQMDHGVATLTPCRM
                     GALSHEVIRDISERYPRLARALWWDTVVDGSIFRQWMIGIGRRTALGRIAHLLCELHA
                     RLHAMGLATNGSYAFPVTQTELGDALGLSTVHVNRVLQELRGKGLISLRGGTLAIHDA
                     PALQEVASFDAAYLYLHGESRDEHTR"
     gene            2732..>3539
                     /locus_tag="VHN20_19635"
     CDS             2732..>3539
                     /locus_tag="VHN20_19635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013501602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX2728040.1"
                     /translation="MEFERPPALARLSAPRQHTPVLIVFIAAVFTSALLLFAVQPMFT
                     RMVLPRLGGAPSVWSVAMVFFQSMLLAGYAYAHALAKAARPLVAVAVHLALLVLASLT
                     LPLSIAQGWGEPPATGEALWLVGLFAVSIGLPFFALSANNPLLQAWFVRTGHRDAADP
                     YFLYAASNLGSFLALLSYPFLIEPTLPLQAQLSVWTAGFYLLVALIAACGFALLKAPQ
                     PEVVAASAASEAAPPPSWRESGRWVFLAAVPSGLLVAVTAHISTDVAAAPL"
BASE COUNT          530 a         1151 c         1222 g          636 t
ORIGIN      
        1 ctatgcggag cggcgcccgg cgcagctgtc gggcggacag cagcagcggg tcgcgctggc
       61 ccgcacgctc gtgatcgagc ccgacgtgct gctgctggac gagccgctgt ccaatctcga
      121 cgccaggctg cggggagaag cgaacgtgac cacgcttgcg gacggggtct tctgctcgat
      181 ggagatcgcg ggcgacaggc cgtcgatctg gtcgacgtcc ggcttctgca tcatctcgag
      241 aaactggcgc gcatacgaag acagcgattc gacgtagcgt cgctggcctt cggcatagat
      301 cgtgtcgaag gctagggacg acttgccgga gccggacagg cccgtgaaca cgacgagctt
      361 gtcgcgcggg atcacgagat cgacattctt gaggttgtgc tcgcgcgcgc cgcgcacggc
      421 aatgacgcgg gcggcgtcgc cgctggcgcg gtcgaacagg tcgtctagac gggccatcgt
      481 gttcaggttc tcaagcctgg ccatatggcc taggcgctgt cgggccgaat gctccggacc
      541 gggatcactt cgatccgaag cgatcgccag ccggatcttt ttggacgcaa aaacacagtc
      601 ggcaaagcgg tgcccgctcc gccgcatcat gctctatgta gtgcgccgcc cgtcgaacgc
      661 cacacgcatc ggcgcctgat tgcatattag aacaaaaagg gtacgtcgga caactgccga
      721 ccgccgatct gggcgcggac cgtgcgaccg ggaggaggcg ccgccgcgcc tactccacct
      781 cgccccaggt ccagcgcttc tcggggccgt cctggccgtc gaccttgacc cgcccgacct
      841 tgcggaaggt gagctcgatg accggcatga tcgaatcctg gccctgctgc tgccgctcga
      901 attgcagcag gtcgtaatag gcgcagcgcg agcggttggg atattcgcgg cacggcgccg
      961 gccgggccgt gtagatcgtg cagcggcgcg tgtgctggtc gaggaacatg cacgtcttgg
     1021 ggaagatgtg gtcggggacg cgcttgagca cgcgctcgcc gtcgtggtcc ttggtgtagc
     1081 ggcgcaacgc cacctcgtag ggcacgttga aatgcttggc gaggcggttg acgtcgcgct
     1141 tggtcacgcg cacccgatca tagatcgagc agcagaaggc cgggcatttg ttgcagtcga
     1201 aataggtgcg cggctggtcg tccttgacga tggtttccgg ctcggtggcc ggcttcacgg
     1261 ctttgcgcgc cggcttgagc gctttggtgg gcacggctct ggcgctggcg cgcggctcgg
     1321 cggtctcgac gatccggccg gcatcggtgg cagggttgag ggctttggtc atggctctgg
     1381 tcttgcgccg aagtgctgtc gcagcggctg ggcatgatcc agcgaagtgg acaccacttc
     1441 gccgaaaagg cttgtcccgg actttatccg ggatcatgcg gttcaaagag atctggagcg
     1501 ggatcaagtc gatctgaagt gatcccgctc cgtgggagct tcgccacgcc cgcctcccgg
     1561 gcggcggcgc gacgcgtcca gccatagatc aagtgacgcg gcagcggaac atgggcacgc
     1621 ggttacgcgt gcggcaaatt tgctgtggat tgcgatgttc ccttccgacc cagatcgcgg
     1681 tcgtccggaa gatccgcgtg cgtgggcgcg cgttgcgagc gcgcctgcct gtaaagggga
     1741 ggggaggcgc tacctcgtgt gctcgtcgcg gctttcgccg tgcagataaa gataggcggc
     1801 atcgaacgag gcgacctcct gcagggccgg cgcgtcgtgg atcgccagtg tgccgccgcg
     1861 caggctgatc agccccttgc cgcgcaactc ctgcagaacc cggttgacat ggacggtcga
     1921 gagcccgagc gcatcgccga gctccgtctg ggtaaccgga aaggcatagg aaccgttcgt
     1981 ggcgaggccc atggcgtgca ggcgggcgtg caactcgcac aggaggtggg cgatgcgccc
     2041 aagcgccgtc cgccgcccga tgccgatcat ccactgccgg aagatcgagc cgtcgacgac
     2101 cgtgtcccac cacagcgccc tggccagcct cggatagcgc tcgctgatgt cccggatgac
     2161 ttcgtgcgac agcgcgccca tccggcacgg cgtcagcgtc gcgacgccgt ggtccatctg
     2221 cttgagcagg aagctgtgca ggtcgacgaa gtcgccggcg atgttgaacg aggtgatctg
     2281 gcggcggccg tcgggaagca gcttgtaacg gcagctgaag ccgtcgagca cgagcgtgct
     2341 ttcggacgcg cggtcgccct cgctgaggac gtcctcgtcg gcgccgtatt cgcgaattcg
     2401 ccagggcgcc ttttcgagca cgcgcttttc ctcgtccgaa agcggagcga aaagctcgag
     2461 ttttcgaacg agagggtgcg tcacacgggg gctcccggtt ggcccgcccc ccgcggctga
     2521 ggagggatcg gccgcccgtc gtcgattgtc tttacaacat cccggtggtc aagaaagttt
     2581 ctggccttgc cggcaagcgt ggcaggccag cagaaggccc ctgctcaggt cgccattcag
     2641 aaggaggccg ggcccggcac tttgcgctgc ccgcgacgtt gcggcaatgt gcacgcgatg
     2701 atcgagttcg ggcgcgagcc aggagacctg catggaattt gagcgcccac cggctctcgc
     2761 ccgcctcagc gcccctcgcc agcacacacc ggtcctgatc gtcttcatcg ccgcggtatt
     2821 caccagcgcg ctgcttctct tcgcagtgca gccgatgttc acgcgcatgg tgctgccacg
     2881 gctcggcggc gccccctcgg tctggtcggt ggcgatggtg ttcttccagt cgatgctgct
     2941 ggcgggctac gcctatgcgc acgcgctcgc caaggcggca cgccccctcg tcgcggtcgc
     3001 ggtccatctc gccctgctcg tgctcgcaag cctgaccttg ccgctgtcga tcgcgcaggg
     3061 ctggggcgag ccgccggcga ccggcgaggc gttgtggctg gtcggcctgt tcgcggtctc
     3121 gatcgggctg ccgttcttcg cgctgtcggc caacaatccg ctgctgcagg cgtggttcgt
     3181 gcggaccggg caccgggacg cggccgaccc gtatttcctc tacgccgcct ccaatctcgg
     3241 cagcttcctg gcgctgctct cgtatccctt cctgatcgag ccgacgctgc cgctgcaggc
     3301 gcaactctcc gtgtggacgg ccggcttcta ccttctcgtc gcgctgatcg ccgcgtgcgg
     3361 cttcgcgctt ctgaaggcac cgcagccgga agttgtcgcg gccagcgccg cgtccgaggc
     3421 ggccccgccg ccaagctggc gcgagagcgg gcgatgggtg tttctggcgg ccgtgccgtc
     3481 cggcctgctg gtcgcggtga ccgcccacat ctcgaccgac gtcgccgccg cgccgctgc
//
LOCUS       DATAIQ010001186         3189 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_183503, whole genome shotgun sequence.
ACCESSION   DATAIQ010001186 DATAIQ010000000
VERSION     DATAIQ010001186.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3189)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3189)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3189
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_183503"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..354
                     /locus_tag="VHN20_19640"
     CDS             <1..354
                     /locus_tag="VHN20_19640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2728041.1"
                     /translation="FDASAEVMRPYDAARVKMTVSSIVVRASGPPGADGNATLVGRVC
                     WSATRNGTRLPDNQVVDIPEGFKTANSSFVLAQVEYEYNPVVGNAITGPMALTEATPW
                     PVRAVMQVSLNGKTC"
     gene            complement(426..1925)
                     /locus_tag="VHN20_19645"
     CDS             complement(426..1925)
                     /locus_tag="VHN20_19645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007568736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannomutase/phosphoglucomutase"
                     /protein_id="HEX2728042.1"
                     /translation="MYPKPQPSIAQNTYEFESLPLVKPTGFREYDARWLFPDEINLMG
                     VQALGLGLGTLVHEMGVRPDVVTGHDFRAYSSAVKYALISGMMAAGLRVRDIGLALSP
                     MAYFGQFALDCPCVAMVTASHNDNGWTGVKMGVERPMTFGPLEMARLREIVLSAAFRP
                     RASGSYELVEDFADRYIADLTSRPKIKRRLKVVAACGNGTAGAFAPKVLEMIGCEVVP
                     LDADLDHTFPRYNPNPEDMKMLHAIADMVRETAADVGFGFDGDGDRCGVVDADGHEIF
                     ADKIGVMLARDLSRLHPNATFVVDVKSTGLFMSDPDLQANGARAEYWKTGHSYIKRRV
                     NELGALAGFEKSGHFFFNAPVGRGYDDGLLTAIAISEMLDRNPGRSMADLYRALPQTW
                     STPTMSPHCADEVKYDVVDRVVKRLNAMRQQGDGLAGHPIVDLVTVNGVRVVTADGTW
                     GLVRASSNKPELVVVVESPVSEARMRETFHALDAIVRDNPEVGAYNQTI"
     gene            complement(2089..2595)
                     /locus_tag="VHN20_19650"
     CDS             complement(2089..2595)
                     /locus_tag="VHN20_19650"
                     /EC_number="3.4.23.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02281 family clan AA aspartic protease"
                     /protein_id="HEX2728043.1"
                     /translation="MSRPIAWAAGTLVAISLSATIAGTRLARQSGASDSDAEAASGAQ
                     KGTILTVSADLAGHFVLHPFVDGRRVRMLVDTGASVVTLSHQDAQALGTRVRPEHFTQ
                     RLATANGIIEAAPVRIAEIRVGDIVVRNVEAVVLPDGRLGTSLLGMSFLRRLGGFEIS
                     RGQLTLKG"
     gene            complement(2721..>3189)
                     /locus_tag="VHN20_19655"
     CDS             complement(2721..>3189)
                     /locus_tag="VHN20_19655"
                     /inference="COORDINATES: protein motif:HMM:NF016894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008671 - 2-dehydro-3-deoxygalactonokinase
                     activity [Evidence IEA];
                     GO_process: GO:0034194 - D-galactonate catabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="2-dehydro-3-deoxygalactonokinase"
                     /protein_id="HEX2728044.1"
                     /translation="WVEMKDGRIARFATYFTGEMYALLRHHSMVGRPAADPEDPAGFD
                     LGLDSAERNSHGKRAGLLHLIFGARAATVTGRLPAAALGPYLSGLLTGDEINGAFSQF
                     DKPEFLTVVAERPRADLFTRALARHGVRVAVKPPVDALVAGLGRILAARPAQA"
BASE COUNT          537 a         1026 c         1102 g          524 t
ORIGIN      
        1 ttcgacgcat cggccgaggt gatgcggccc tatgatgcgg cacgggtcaa gatgacggtc
       61 tcgagcatcg tcgtgcgggc gtccggcccg ccgggtgccg acggcaatgc gacgttggtg
      121 ggacgcgtat gctggagcgc gacgcgcaac ggcacccggc tgccggacaa ccaggtcgtc
      181 gatatccccg aagggttcaa gacggccaac tcgtcgtttg tccttgccca agtggaatac
      241 gagtacaatc cggtcgttgg gaatgcgatc actggcccga tggcgctcac ggaggccacc
      301 ccttggccgg tgcgcgcggt gatgcaggtg tccctcaacg gcaagacgtg ctgaagggca
      361 aagtcctgtg tgagaggctg gaccggatca gggcaggcag ccgcccggat catgctcggc
      421 gacgctcaaa tggtctggtt gtaggcgccg acttccgggt tgtcgcgcac gatcgcatcg
      481 agcgcatgga acgtctcgcg catgcgcgct tccgaaacgg ggctttccac gacgaccacg
      541 agctcgggct tgttcgacga ggcgcgcacg agaccccagg tgccgtccgc tgtgaccacg
      601 cgcacaccgt tgacggtgac gaggtcgaca atgggatgac cggcgaggcc atcgccttgc
      661 tgccgcatcg cgttgagccg tttcacgacg cggtcgacga cgtcgtattt aacctcgtcg
      721 gcgcagtgcg gtgacatggt tggcgtgctc caggtctgcg gcaacgcccg gtaaagatcg
      781 gccatcgacc tgcccggatt gcggtcaagc atctcggaaa tggcgatcgc cgtcaggagg
      841 ccgtcgtcat agccccgccc gaccggcgcg ttgaagaaga agtggccgga cttctcgaaa
      901 ccggcgagcg cgcccagctc gttgacgcgg cgtttgatgt aggagtggcc cgtcttccag
      961 tattcggccc gggcgccgtt cgcctgcaga tcggggtcgc tcatgaagag tccggtcgat
     1021 ttgacgtcga cgacgaacgt cgcgttcggg tgtagacgcg agaggtcgcg ggccagcatc
     1081 acgccgatct tgtcagcaaa aatctcgtgg ccgtcggcgt cgacgacccc gcagcggtcg
     1141 ccgtccccgt cgaagccgaa tccgacatca gcggcggtct cgcgcaccat gtcggcgatg
     1201 gcatgaagca tcttcatgtc ttcggggttc ggattgtagc ggggaaaggt gtgatcgaga
     1261 tcggcgtcga gaggcacgac ctcgcagccg atcatctcca ggaccttcgg cgcaaaggcg
     1321 ccggcggtgc cgttgccaca ggccgccacc accttgaggc ggcgcttgat tttcggccgg
     1381 ctggtcaggt cggcgatgta gcggtcggca aagtcctcga ccagctcgta agacccgctg
     1441 gcgcgcggcc tgaacgcggc gctgagcacg atctcgcgga gccgggccat ctcgaggggc
     1501 ccgaacgtca tcggccgttc aacgcccatc ttgacgccgg tccagccgtt gtcgttgtgc
     1561 gaggcggtca ccatagcgac gcacgggcag tcgagcgcga actggccgaa atatgccatg
     1621 ggcgaaagcg cgagcccgat gtccctgacg cgcaagcccg cggccatcat gccggagatc
     1681 agcgcgtatt tgaccgccga cgaatacgcc cggaaatcgt ggccggtcac gacgtccggg
     1741 cgcacgccca tctcgtgcac cagggtgccg aggcccagcc ccagcgcctg cacccccata
     1801 aggttgatct cgtccgggaa cagccagcgc gcatcgtatt cgcggaagcc ggtcggtttc
     1861 acgagcggca acgattcgaa ctcatacgtg ttctgcgcga tcgagggttg aggtttcgga
     1921 tacatcgggc gccggagctg gacgggcttg cgtcgaaata gccgggccgg cgcgcgaccg
     1981 caacgcgggg tccggactgc gctctcaggg tcggccgccc gccggccggg cttagggaat
     2041 gccgcgaggc cccgccgtgg ccggcggcgg ggctttcaag agtgacggtc agcccttcag
     2101 ggtcagctgg ccgcgggaga tctcgaagcc accaagacgg cgcaggaaag acatgccgag
     2161 caggctcgtg ccgaggcgcc cgtccggcag cacgacggcc tcgacgttgc gcaccacaat
     2221 gtcgccgacg cggatctcgg caatccggac cggcgccgct tcgatgatgc cgttcgccgt
     2281 cgccagcctc tgcgtgaaat gctccgggcg cacccgggtt ccgagggcct gcgcgtcctg
     2341 atgcgacagc gtcacaacgc tcgcccccgt atcgacgagc atgcgtaccc gccgcccgtc
     2401 gacaaacggg tgcaggacga aatgcccggc gagatcggcc gagactgtca ggatcgttcc
     2461 cttctgggcg cccgaggcgg cctccgcgtc gctgtcggaa gctccggatt gccttgcgag
     2521 gcgcgtgccg gcgatcgtgg ccgacaagct gatggcgacc agggttccgg ccgcccaggc
     2581 gatcgggcga gacatgctgc tctctccgtg acggctacga tcatcgtcga tgccgatcgc
     2641 gggaggttta acgtggtgct gtcgtggcgg cgcttctgcg cacgtggttg cgaattgatt
     2701 gatcaatccg ctcgacttgc tcacgcctgc gcggggcgag ccgccaggat gcgtccgagc
     2761 cccgcgacga gtgcgtccac cggcggtttg acggcgaccc gcacgccatg acgggccagc
     2821 gcccttgtga agaggtcagc ccgcggccgc tcggcgacga ccgtcaggaa ctccggcttg
     2881 tcgaactgcg agaaggcgcc attgatctcg tctccggtca gaagcccgga cagatatggc
     2941 ccgagggccg cggcgggcag ccggcccgtg acggtggcgg cgcgggcgcc gaaaatcaga
     3001 tgcaggagcc cggcgcgctt gccatggctg ttgcgctcgg ctgaatcgag gccgagatcg
     3061 aagccggccg gatcttccgg gtcggcggcc ggccggccga ccatggaatg atggcgcagc
     3121 agtgcgtaca tctcgccggt gaaataggtg gcgaagcgtg cgatgcgccc atccttcatc
     3181 tcgacccat
//
LOCUS       DATAIQ010001187         1532 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_183547, whole genome shotgun sequence.
ACCESSION   DATAIQ010001187 DATAIQ010000000
VERSION     DATAIQ010001187.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1532)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1532)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1532
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_183547"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..325)
                     /locus_tag="VHN20_19660"
     CDS             complement(<1..325)
                     /locus_tag="VHN20_19660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017484106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HEX2728045.1"
                     /translation="MPIQIRTSLAEPDTGDAFVPHRPARPDKKEGGKRFTLTSDYQPA
                     GDQPQAIKELVEGITGQGEQSQVLLGVTGSGKTFTMAKVIETLQRPALVLAPNKILAA
                     QLYGEF"
     gene            404..892
                     /locus_tag="VHN20_19665"
     CDS             404..892
                     /locus_tag="VHN20_19665"
                     /inference="COORDINATES: protein motif:HMM:NF023696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3617 family protein"
                     /protein_id="HEX2728046.1"
                     /translation="MSAAPRALLPLLAVPLAAMTADTVNMAPGRWIETTTTTAVTLGG
                     RPAAGARLNQPASRLVCLTPEEAAEPALYFQSKAPSGACAAPTGTVADGRIKLASTCQ
                     DANNPRMMIEVSGTYARDSYSAAIRAQSLVRGQPAVIDMTLTGRFDGACRGDEEPDPA
                     TR"
     gene            951..1484
                     /locus_tag="VHN20_19670"
     CDS             951..1484
                     /locus_tag="VHN20_19670"
                     /inference="COORDINATES: protein motif:HMM:NF023696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3617 domain-containing protein"
                     /protein_id="HEX2728047.1"
                     /translation="MMRAAMMVLLLDLAACGKSEPEVSLENATPEQVAAEMKKSGIAE
                     ELRKPGKWAYETTITQIDAPGMPPEMAAQMKQVMGQGQKLERCVTAEEIAKVDAFVGA
                     NQANCTFAKYTVGGGRVEGEARCDQGGMKQHMVMDGKYTPDSSDMTIRSTTSGAPGPA
                     SEMKMTMRIKSNRLGDC"
BASE COUNT          263 a          524 c          535 g          210 t
ORIGIN      
        1 tgaactcgcc gtagagctgg gcggcgagga tcttgttggg ggcgagcacc agcgccgggc
       61 gctgcagcgt ctcgatcacc ttggccatgg tgaaggtctt gcccgaaccg gtgaccccga
      121 gcagcacctg gctctgctcg ccctgcccag tgatcccctc gaccagttcc ttgatcgcct
      181 gcggctggtc gccggccggc tggtagtcgc tggtgagggt gaagcgcttg ccgccttcct
      241 tcttgtccgg ccgcgccggg cggtgcggaa cgaacgcgtc gcccgtgtcc ggttcggcca
      301 gcgaggtgcg gatttgaatt ggcatcggat gccatatggg catctggcgc ccgtcgggca
      361 aatcggccac catgcgctgc cctgcccgac cggagcccgt accatgtccg ccgcaccccg
      421 cgccctcctt cccctcctcg ccgtgccgct tgcggcgatg accgccgaca cggtcaacat
      481 ggcgcccggc cggtggatcg agaccaccac cacgaccgcg gtcactctcg gcgggcggcc
      541 ggcggcgggg gcgcggctca accagccggc cagccgcctg gtctgcctga cgcccgagga
      601 agcggccgag ccggcgcttt acttccagtc gaaggcgccg agcggggcct gcgccgcgcc
      661 gaccgggacc gtcgccgacg gccggatcaa gctcgcttcg acctgccagg acgcgaacaa
      721 cccgcgcatg atgatcgagg tcagcggcac ttacgcgcgg gacagctaca gcgccgcgat
      781 ccgcgcccag agtctggtcc gcggccagcc ggcagtgatc gacatgaccc tcactggccg
      841 cttcgacggc gcctgccgcg gcgacgagga gccggacccg gccacgcgat gaggcgcatt
      901 gcgcgccgcc gccactgcga tatgctgccc gctcgatcga caggggaaac atgatgcgcg
      961 ctgcgatgat ggtcctgctt ctcgacctcg ccgcgtgcgg caagagcgag cccgaggtga
     1021 gcctcgagaa tgcgaccccc gagcaggtcg cggccgagat gaagaagagc gggatcgccg
     1081 aggaactgcg caagcccggc aagtgggcct acgagaccac catcacccag atcgacgccc
     1141 ccggaatgcc gccggagatg gcggcccaga tgaagcaggt gatgggccag ggccagaagc
     1201 tcgagcgctg cgtcaccgcc gaggagatcg ccaaggtcga tgcgttcgtc ggcgccaacc
     1261 aggccaattg caccttcgcc aagtacacgg tcggcggcgg ccgggtcgag ggggaggcgc
     1321 gctgcgatca gggcggaatg aagcagcaca tggtgatgga cggcaaatac acgccggaca
     1381 gcagcgacat gaccatccgc tcgaccacca gcggcgcgcc ggggccggca agcgagatga
     1441 agatgacgat gcggatcaag tcgaaccggc tcggcgactg ctgagccgca acggaggaac
     1501 ggggaatgac tggacgttgg attgcgattg cg
//
LOCUS       DATAIQ010001188         2727 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_183624, whole genome shotgun sequence.
ACCESSION   DATAIQ010001188 DATAIQ010000000
VERSION     DATAIQ010001188.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2727)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2727)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2727
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_183624"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..368)
                     /gene="tmk"
                     /locus_tag="VHN20_19675"
     CDS             complement(<1..368)
                     /gene="tmk"
                     /locus_tag="VHN20_19675"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019903861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004798 - thymidylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HEX2728048.1"
                     /translation="MSGRFITFEGGEGAGKSTQIQRLLHHLQGAGIKAVTTREPGGSP
                     KAERIRESVLSGAAKAFGPLAEAVMFSAARLDHLEQTIRPALSRGEFVLCDRFADSTR
                     AYQGALGRIDAALIRALERAV"
     gene            complement(365..1507)
                     /locus_tag="VHN20_19680"
     CDS             complement(365..1507)
                     /locus_tag="VHN20_19680"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015933233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase family
                     protein"
                     /protein_id="HEX2728049.1"
                     /translation="MLAAPAARAQTFQTTAPQAILVDYDSGTVLFEKNADELMVPASM
                     AKTMTVEVIFIEIRQGRLSLDSEFLISENAWRKGGGPSSGSSMFAQLNSRVKLSDLLR
                     GIIIQSGNDASIAVAEGVAGNEDNFARMMTQRARELGMTRSTFRNATGYHHPEQKVTA
                     RELARLAAHVIETYPDLYRMFGEKEFTWNKIRQQNRNPLLTMDLGADGLKTGNVDESG
                     FGLVGSAVQNGQRLIVVLNGLKTGRDRATESRKLLDWGFRAFEARQLFAADEPIAQAR
                     VFGGEQSSVPVVSKKPVRLLMPRGSGDRITARVVYSGPLRTPVQKGAEVARLRVTRGT
                     VQALDIPLYAGEDVGTGSLSQRALDGLLEFGTGVVRRAFARVSERQ"
     gene            complement(1653..2684)
                     /locus_tag="VHN20_19685"
     CDS             complement(1653..2684)
                     /locus_tag="VHN20_19685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HEX2728050.1"
                     /translation="MRAFTLGAVALTAANCSSQKTSSGSAVDPKYGVAASPRVVEDGE
                     AVPKGGGRAMVGRPYVVGGQTYVPRDNPNYVREGLASWYGLAFHGRRTANGEVFDRYS
                     VGAAHPTMPLPSYARVTNLHNNRTMIVRVNDRGPYHANRIMDVSERVAEALDFKRAGT
                     ARVRIEYVGRASLRGSGDAKLMATLRQDGRPVPGLTAPIMVAQAATPGSRSKALAFRD
                     AGPGGSKDPNFDPLAHVPAPAAPTPAPAPVTVAKAPDTAAGSAIGRLFSSLTPVPPER
                     PLDLMTIPNAASPVRKAGTPVAQLPPPRPATAGLFFSAPDLPRSSFTKDNPFKDMKPQ
                     RFVAFKGQP"
BASE COUNT          392 a          919 c          993 g          423 t
ORIGIN      
        1 acggcgcgtt cgagggcgcg gatgagcgcc gcgtcgatgc ggccgagggc gccctggtag
       61 gcgcgtgtgg aatcggcgaa gcggtcgcag agcacgaact ctccgcggct cagcgccggc
      121 cggatggtct gctcgaggtg gtcgaggcgc gccgccgaga acatcacggc ttcggcgagc
      181 gggccgaatg ccttggccgc cccggacagc acgctctcgc ggatgcgctc ggccttgggc
      241 gagcctcccg gctcgcgggt cgtgacggcc ttgatgccgg cgccctgcag gtggtgcagc
      301 aagcgctgga tctgcgtgga tttgccagcc ccctcccctc cttcgaaggt gatgaagcgg
      361 ccgctcactg gcgctcggag acgcgggcga aggcgcggcg cacgacgccg gtgccgaact
      421 ccagcagccc gtcgagggcg cgctggctca aggagccggt tccgacgtcc tcgccggcgt
      481 aaagcgggat gtcgagcgcc tggaccgtgc cgcgcgtgac gcgcaggcgc gccacctcgg
      541 cgcccttctg cacgggcgtg cgcagcgggc ccgaatagac gacgcgcgcc gtgatgcggt
      601 cgcccgagcc gcgcggcatc aggaggcgca ccggcttctt cgacacgacc gggacggagc
      661 tctgctcgcc gccgaagacg cgcgcctggg cgatcggctc atcggccgcg aatagctgcc
      721 gcgcctcgaa cgccctgaaa ccccagtcga gcagcttgcg cgactcggtc gcgcgatcgc
      781 gcccggtctt gaggccgttg agcacgacga tcaggcgctg cccgttctgc acggccgagc
      841 cgaccagccc gaaaccggac tcgtcgacgt tgccggtctt gaggccgtcg gcgccgagat
      901 ccatggtcag caggggattg cggttctgct gccggatctt gttccaagtg aattccttct
      961 cgccgaacat ccggtagagg tccgggtagg tctcgatgac gtgggcggcg agccgggcga
     1021 gctcgcgcgc cgtcaccttc tgctccggat ggtggtagcc ggtcgcgttc ctgaaggtcg
     1081 agcgcgtcat cccgagctcg cgcgcccgct gcgtcatcat gcgggcgaaa ttgtcctcgt
     1141 tgccggcgac gccttcggcg accgcgatcg aggcgtcgtt gcccgactgg atgatgatgc
     1201 cgcgcaacag gtcggacagc ttcacccggc tgttgagctg ggcgaacatc gacgagccgc
     1261 tggacggccc gccgcccttg cgccacgcgt tctcggagat caggaactcg ctgtcgaggc
     1321 tgagccggcc ctggcggatc tcgatgaaga tcacctcgac cgtcatggtc ttggccatgc
     1381 tcgccggaac catgagctcg tcggcgttct tctcgaacag caccgtgccg gaatcgtaat
     1441 cgaccagaat ggcttgcggc gccgtcgtct ggaacgtctg cgccctcgcc gcgggtgcgg
     1501 ccagcatggc gagaccggcc agcgcgccca gcagggcgcc cgcggccggc cgggaaagct
     1561 tgatgaacgt cgttaacatg aaccgcgcgc tcacggttgg aggagacgcg gaatctaagc
     1621 ttcagcgttt caggatcaac gctttagcag aatcatggtt gacctttaaa ggcgacaaag
     1681 cgttgcggtt tcatgtcctt gaaagggttg tcctttgtga aggacgagcg cggcaggtcc
     1741 ggcgccgaga agaacaggcc cgcagtggcg ggacggggcg gcggcagctg cgcgactggc
     1801 gttccggcct tgcgcaccgg gctggcggcg ttcgggatcg tcatcaggtc gagcgggcgc
     1861 tcgggcggca cgggcgtcag actgctgaac aggcggccga tggcgctgcc cgcggccgtg
     1921 tcgggcgcct tcgccaccgt gacgggcgca ggggccggag tcggcgcggc cggcgccggc
     1981 acatgcgcga ggggatcgaa attcgggtcc ttgctgccgc ccgggcccgc gtcgcggaag
     2041 gcaagggcct tcgaccgcga tccgggcgtc gcggcttggg cgaccatgat cggcgccgtg
     2101 aggcccggca ccggccgtcc gtcctggcgc agcgtcgcca tcagcttggc gtcgccgctg
     2161 ccgcgcagcg aggcgcggcc gacatattcg atgcgcacgc gcgccgtccc ggcgcgtttg
     2221 aaatcgagcg cctcggcgac ccgctcggac acgtccatga tgcggttggc gtgatacggg
     2281 ccgcggtcgt tgacgcgcac gatcatcgtg cggttgttgt gcaggttggt gacgcgcgcg
     2341 tagctcggca gcggcatcgt cggatgcgcg gcgccgaccg aatagcggtc gaagacctcg
     2401 ccgttggccg tccgccggcc gtggaaggcc agcccgtacc acgacgcgag cccctcgcgc
     2461 acgtaattgg gattgtcgcg cggcacgtag gtctgcccgc cgaccacata cggccggccg
     2521 accatggccc ggccgccgcc cttcggcacc gcctcgccgt cttcgacgac gcgcgggctt
     2581 gcggcgacgc cgtatttggg atcgacggcg gaccccgagg aggttttctg cgagctgcaa
     2641 ttggcggcgg tcagcgcgac ggcaccgagc gtgaacgcgc gcaccaagcg ccgcgcgccg
     2701 gcgcggccgt gacgctcgcc cggagtc
//
LOCUS       DATAIQ010001189         2010 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_184122, whole genome shotgun sequence.
ACCESSION   DATAIQ010001189 DATAIQ010000000
VERSION     DATAIQ010001189.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2010)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2010)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2010
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_184122"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..309
                     /locus_tag="VHN20_19690"
     CDS             <1..309
                     /locus_tag="VHN20_19690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2728051.1"
                     /translation="AGTAPTLYRPPYGIFSPLALAEARRRGWTALLWSAWGRDWPARA
                     TAAGIAARATRTVSEGDIVLLHDADHYASPGSWERTAAALPLILEELQRRGLRAVAAV
                     "
     gene            519..1508
                     /locus_tag="VHN20_19695"
     CDS             519..1508
                     /locus_tag="VHN20_19695"
                     /inference="COORDINATES: protein motif:HMM:NF025063.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX2728052.1"
                     /translation="MTKDDVLFGYRLQLFAEAARTGNVSAACRTFGVHRSTYYAWKRQ
                     VDRHGLEMLRPRERRCPQMPNALPKMIEERIVSFSIAHPGLGPKRVASELAREKWGGI
                     IVSPNGVWKVLCRHGLNTRAKRLGLIAGYAAPYEPPRDPGPEQHIDVDRPGELVGIDC
                     FYVGRLKGTDGAIWQLTAIDIASSFAWAELVICKQGNPTALQTSRLAKRIAVELKAAG
                     WRLKRMLSDNGNEFRGITFGQTLQRLGVRHSRIHAGRPQTNGNVEALHKTILDECWRP
                     AFARYIYPRYTGLRRELDTYLAFYNHDRVHHGRLTQGRIPADIVYGARKMEAR"
     gene            complement(1545..>2010)
                     /locus_tag="VHN20_19700"
     CDS             complement(1545..>2010)
                     /locus_tag="VHN20_19700"
                     /inference="COORDINATES: protein motif:HMM:NF016119.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="class E sortase"
                     /protein_id="HEX2728053.1"
                     /translation="LAKPSELDLAALRKLATEKRRMAFLARRLRADAGRGSAVGRIKI
                     EKIDANYVVVNGSDAASLRKGPGIYDDVPFPGMPGTTAIAGHRTTYGAPFRRINKVEK
                     TRIVKPTALEVIKRVSYDRLVLSACHPLYSAAKRFIVFARLVAAQARGAATL"
BASE COUNT          316 a          708 c          682 g          304 t
ORIGIN      
        1 gccggcacgg cgccgacgct ataccgcccg ccgtacggga tcttctcgcc gctcgcgctc
       61 gccgaggccc gccgccgcgg atggacggcg ctgctgtggt cggcttgggg gcgggactgg
      121 ccggcgcgtg cgacggcggc ggggatcgcc gcccgcgcga cccgcacggt cagcgaaggc
      181 gacatcgtgc tgctccacga cgccgaccac tacgcctcgc ccggctcctg ggagcggacg
      241 gccgccgcgc tgccgctcat cctcgaggag ctgcaacgcc gcggactgcg cgccgtcgcc
      301 gccgtctaac ctgggcggtc tccggctggt cccgacagtt ggccgcttga taggcgggcg
      361 ctagataggt gctgggagcc cgataggtgg gcgctagata ggtgctggaa gtccgatagg
      421 tctttgacgt cggacgggtc ttgcccatgg gcaagacccg tccgcgcgtc ggctcaggct
      481 gcctccttca cggccaagtg gaagaggagc aggagctgat gacgaaggat gacgtgctgt
      541 tcggctatcg cctgcagctg ttcgccgagg ccgcgcggac tggcaacgtg tcggcggcgt
      601 gccgcacgtt cggggtgcat cgctcgacct attacgcgtg gaagcgccag gtcgaccgtc
      661 acggcctgga gatgctcaga ccgcgcgagc gtcgatgccc gcagatgccc aacgcgctgc
      721 cgaagatgat cgaagagcgg atcgtctcgt tctcgatcgc gcaccccgga ctcggaccca
      781 agcgcgtcgc gtcggagctt gcacgcgaga agtggggcgg gatcatcgtc tcgcccaacg
      841 gcgtgtggaa ggtgctctgc cgtcacggcc tgaacacccg cgccaagcgc ctggggctga
      901 tcgccggcta cgccgcgccc tacgagccac cgcgtgatcc tggcccagag cagcacattg
      961 acgtcgatcg gccgggcgag ctagtcggca tcgactgctt ctacgtcggg cggctgaagg
     1021 gcaccgacgg cgccatctgg cagctcaccg cgatcgacat cgcctcatct ttcgcctggg
     1081 ccgagctcgt catctgcaag cagggcaacc cgaccgccct gcagaccagc cgcctcgcca
     1141 aacgcatcgc cgtcgaactc aaggccgccg gctggcgcct aaaacggatg ctctccgaca
     1201 acggcaacga gtttcgcggc atcacgttcg gacagacgct ccagcgactc ggcgtccgcc
     1261 acagccgcat tcatgccggc cgcccgcaaa ccaacggcaa tgtcgaggcc ctgcacaaga
     1321 cgatcctcga cgagtgctgg cgcccagcgt tcgcgcgcta catctaccca cgctacaccg
     1381 gcctgcgccg cgagctcgac acctacctcg cgttttacaa ccacgaccgc gtgcaccacg
     1441 gccgcctcac ccaaggtcgc atccccgcag acatcgtcta cggtgcccgc aagatggagg
     1501 cccgatgagg cgaacctgtc ggcacatcac ggagtccgcc caggttagag cgtcgccgcg
     1561 ccgcgcgcct gcgcggcgac gaggcgggcg aagacgatga agcgcttggc ggcgctgtag
     1621 agcggatggc aggccgaaag gacgagccgg tcgtagctga cgcgcttgat gacctccagc
     1681 gccgtcggct tgacgatccg cgtcttctcg accttgttga tcctgcgaaa cggcgcgccg
     1741 tacgtcgtgc ggtgaccggc gatcgcggtc gtgccgggca tccccgggaa cgggacgtcg
     1801 tcgtagatgc cgggcccctt gcgcagggag gcggcgtcgc tgccgttgac gacgacgtag
     1861 ttggcgtcga tcttctcgat cttgatgcgc cccaccgccg acccacgccc ggcgtcggcg
     1921 cgcagccggc gcgcgaggaa ggccatccgc cgcttctcgg tggcgagctt gcgcagcgcc
     1981 gcgaggtcga gctcgctcgg cttggcgagc
//
LOCUS       DATAIQ010001190         7750 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_86913, whole genome shotgun sequence.
ACCESSION   DATAIQ010001190 DATAIQ010000000
VERSION     DATAIQ010001190.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 7750)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7750)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7750
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_86913"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..551
                     /locus_tag="VHN20_19705"
     CDS             <1..551
                     /locus_tag="VHN20_19705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007598956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008983 - protein-glutamate
                     O-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="protein-glutamate O-methyltransferase CheR"
                     /protein_id="HEX2728054.1"
                     /translation="ASSGQEPYSLAIILSEAAAKLAGWKVEIVATDISTEVLEKAKAG
                     LYSQFEVQRGLPIQMVLKYFTQVGEQWQIAPAIRSMVDYRPLNLIKDFSHLGTFDIVF
                     CRNVLIYFDGPTKADVFKRMAQSLAGDGTLILGAAETVIGLSEALVPHPEHRGLYMPN
                     RAAPAATPAAAPAAPVRLAAVR"
     gene            complement(796..1497)
                     /locus_tag="VHN20_19710"
     CDS             complement(796..1497)
                     /locus_tag="VHN20_19710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010683835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX2728055.1"
                     /translation="MRVLLIEDDSATAQSIELMLKSENFNVYTTDLGEEGIDLGKLYD
                     YDIILLDLNLPDMSGYEVLRTLRVAKVKTPILILSGLAGIEDKVRGLGFGADDYMTKP
                     FHKDELVARIHAIVRRSKGHAQSVITTGDLVVNLDQKTVEVSGARVHLTGKEYQMLEL
                     LSLRKGTTLTKEMFLNHLYGGMDEPELKIIDVFICKLRKKLANASQGKNYIETVWGRG
                     YVLREPTESDERIAV"
     gene            1839..3179
                     /gene="fliI"
                     /locus_tag="VHN20_19715"
     CDS             1839..3179
                     /gene="fliI"
                     /locus_tag="VHN20_19715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019903130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar protein export ATPase FliI"
                     /protein_id="HEX2728056.1"
                     /translation="MRQQQKTTSRLAMATAALESIEEVEVFGRVAGVRGLLIEIAGPV
                     AAMQLGGRLDIEIDRGTVPCEVIGFSGDQALAMPFGSLQGVRRGCPAHVRTQLDGVQP
                     SQSWLGRVVDALGRPIDGKGPLPAGGVTYPFRADPPPPHARRRVAEPLDLGVRALNTF
                     LTTCRGQRMGIFAGSGVGKSVLLSMMARFTAADVAVIGLVGERGREVQEFLQDDLGEA
                     GLARSVVVVATSDEPALMRRNAAFLTLALSEYFRDQGASVLCMIDSITRFAMAQRDIG
                     LAAGEPPTAKGYTPTVFNELPRLLERAGPGTGDGTITGLFTVLVEGDDHNEPVADAVR
                     GILDGHIVMERQIAERGRYPAINVLKSVSRTMPRSCDPVYRPLVMKARQVLATYSDME
                     ELIRLGAYRAGSSAEVDEAIALFPALDDFLSQSKEDSTSIGDGYSRLADILSGA"
     gene            3224..3640
                     /gene="fliJ"
                     /locus_tag="VHN20_19720"
     CDS             3224..3640
                     /gene="fliJ"
                     /locus_tag="VHN20_19720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012452679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009288 - bacterial-type flagellum
                     [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0003774 - cytoskeletal motor activity
                     [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar export protein FliJ"
                     /protein_id="HEX2728057.1"
                     /translation="MKSRDTLIRLKRFQVDEKRRRVAQIEMMIAEFDRMATELNREIS
                     GEEQKAGISDPGHFAYPTYAKAAMQRRDNLQRSADELKGQLEEAKAELGEAFEELKKA
                     EILDDRERSAERALETARDQAAMNQIGLQRAARPSY"
     gene            complement(3679..4344)
                     /locus_tag="VHN20_19725"
     CDS             complement(3679..4344)
                     /locus_tag="VHN20_19725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX2728058.1"
                     /translation="MKISGYTDLPPGTIAAVVTYLEMHAPPQPQAVARQDWGMAPLTG
                     DLARYRGLFRQVGEPWLWFSRLVMDDTVLRSIVDHPAVQAYAMHENGADIGLLELDFR
                     EPGTCELAFFGVIPEAIGRGWGRILMNEAIRRAWEQPIRRLWVHTCSLDHPRALQFYI
                     RSGFRPYKRAVEIADDPRLKGHLPLTAAPHVPPIAHAATGMRAGARLTPRLTLGRWRA
                     RRN"
     gene            4697..5791
                     /locus_tag="VHN20_19730"
     CDS             4697..5791
                     /locus_tag="VHN20_19730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthase
                     domain-containing protein"
                     /protein_id="HEX2728059.1"
                     /translation="MKHVREFVWPIIGLLAVVVSGWLLYHELRGLSIEALWSSLRAIP
                     THQYLLAAASTLVAYAALAWYDRIALLHLGLHHISWWFVSVCSFTTYALSHNIGASVF
                     SGALVRYRAYTSKGLSAPQVAVLVALCSFTFGLGTVLLGGVVLTIYPELFSRLPEAIP
                     AFLREATTARVVGLAMLAFVALYVVGSILHLRPLCIRDFKLEYPRPAVMVRQLIAAPL
                     ELLGAAGIIYFALPETGNPGFVAVLAAFLASFSAALASHAPGGLGVFELVFVAIMPDV
                     PKAEVLAALIIFRVFYLLIPFAMAIIVVLLFERARVAQAWRERTAAQGLSPIPSPLHM
                     PSATPATAAHPHPAAPAPAATTAPPGVASH"
     gene            5775..6626
                     /locus_tag="VHN20_19735"
     CDS             5775..6626
                     /locus_tag="VHN20_19735"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX2728060.1"
                     /translation="MSRAIDPGARVRGRRLAFGLATVLGLAPRGFFIPYRYAGSANPA
                     GYPALHALFDAATESIDGLMQAIEAHRDDLQRIAADGGPARFDQDWFPRLDAAALYAL
                     VRRERPRLIVEIGSGHSTRFLARAIADGGLATELVCIDPAPRAALDGLNLRHRQHLLS
                     EADAGLFETLAPGDILFIDSSHVAMPGTDVDRLFLDVLPRLARGVLVHVHDVFLPDAY
                     PAAWTWRGYNEQLLAGALLQGRGYEIVFASHYVAAHCPAQVEHSVLAQLPLLPGAYET
                     SLWLRKS"
     gene            complement(6655..>7750)
                     /locus_tag="VHN20_19740"
     CDS             complement(6655..>7750)
                     /locus_tag="VHN20_19740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018259885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FHIPEP family type III secretion protein"
                     /protein_id="HEX2728061.1"
                     /translation="LGIAAGGASAEAGAPGAPKEEPIADVLKMDDLKIEIGYALLPLV
                     NSPDGSDRLTEQIKALRRQLAAEVGFVMPSVRILDNVHLEANAYSIRVKEIDAGEGSV
                     FPNLFMAMDPMGAQVQLPGHHMLEPTFGLPCTWLDSGLRDEAQLRGYTVVDAATVMST
                     HLAEVIKAHMSELLSHVEVQKLLKELPKEHTELIKEIVPAQISTTGIQRVLQYLLTER
                     VSIRDLGTIIEGISEVCASLKNPRDIAEHVRSRLARQICAQYVAPGGHIPIITLSPQW
                     EQAFLESIVGHGDDRHLAMQPSRLSEFVNTVRDRFEEAARMGEMPVLVTSVGSRPFVR
                     SIIERFRRETPVLSQGEIHPRARLRTVGSV"
BASE COUNT         1213 a         2613 c         2550 g         1374 t
ORIGIN      
        1 cggcgtcgag cggccaggag ccgtattcgc tcgccatcat cctcagcgag gcggctgcca
       61 agcttgccgg ctggaaagtc gagatcgtcg ccaccgacat ctcgaccgag gtgctggaga
      121 aagccaaggc cggcctttac agccagttcg aggtgcagcg cgggctgccc atccagatgg
      181 tgctcaaata tttcacgcag gtcggcgagc agtggcagat cgccccggcc atccgcagca
      241 tggtcgatta caggcccctg aatctgatca aggatttcag ccacctcggc acgttcgaca
      301 tcgtcttctg ccgcaacgtg ctgatctatt tcgacggccc gaccaaggcc gacgtgttca
      361 agcgcatggc ccagtcgctc gccggcgacg gcacgctgat cctgggcgcg gccgagaccg
      421 tgatcgggct cagcgaggcg ctcgtgccgc atcctgagca ccgcggcctc tacatgccga
      481 accgcgcggc tccggccgcc acgccggccg cggccccggc tgctcccgtc cgtctcgcgg
      541 cggtccgcta gagggtgatc agttcagtct gaagcggtcc cgctccgcgt ccaaatgagt
      601 tgcatgatcc cggttcggct cccggacaag catgttcggc agagagtgca cgaagatcca
      661 ggtcgagggc aggctttcgc ccgatcgtgc cctgcttctt gccaagccgc acggtcacgt
      721 cgcgggatca tgctccaaag caaaagcccc gccgaagcgg ggctttctct acgcggtctg
      781 gccgtacatc cgggctcaaa ccgcgatacg ctcgtccgac tcggtcggct cgcgcaggac
      841 gtagccgcgg ccccagacgg tctcgatata gttcttgccc tggctggcat tggcgagctt
      901 cttgcgcagc ttgcagatga agacgtcgat gatcttcagc tccggctcat ccatgccgcc
      961 atagagatga ttcaggaaca tctccttggt cagggtggtg cccttgcgca gggaaaggag
     1021 ctccagcatc tgatattcct tgccggtcag atgcacacgc gcgccgctga cctcgaccgt
     1081 cttctggtcg agattgacca cgagatcgcc ggtcgtgatg accgactgcg cgtggccctt
     1141 ggaacggcgg acgatcgcgt ggatgcgcgc cacgagctcg tccttgtgga acggcttcgt
     1201 catgtagtcg tcggcgccga agccgagacc acgcaccttg tcctcgatgc cggcaaggcc
     1261 ggacagaatc aggatcggcg tcttgacctt ggccacgcgc aacgtgcgca ggacctcgta
     1321 gcccgacatg tcgggcagat tcagatcgag gaggatgatg tcgtaatcat agagcttgcc
     1381 gaggtcgatg ccttcttcgc caagatcggt cgtgtacaca ttaaagtttt cggacttgag
     1441 catcagctcg atgctctgcg ctgtcgcgct gtcgtcctct atcagtagta cgcgcatgtc
     1501 aggtccccag cccggccccc gaggcttgca ggcagaatag tctgcccgtc cgccactggc
     1561 ttatggcgaa cgcctccttt gctccgactc gcaacgctaa tgcgccatgg ttaacaaaca
     1621 ctgattcaag cgtgcaaggg ttcacccccc atccctgtat ggacgagccc aacatcttgc
     1681 ggtcagtgtg gtttttttga ctcattccga cggcgttgca ggtgaaggaa ttggtataag
     1741 cgactcttgc gactcgcatc tccgccggta gctgtcgcca gttacgggcg gggcacacat
     1801 agtgttaatg aagcgagtaa acgaaaggtt gaggcggcat gcggcagcag cagaaaacca
     1861 cgagccggct ggcgatggcc acggccgcgc tcgaaagcat cgaggaagtc gaggttttcg
     1921 gccgcgttgc cggcgtgcgc gggctgctga ttgagatcgc cggcccggtt gccgccatgc
     1981 agcttggcgg gcggctcgac atcgagatcg atcgcggcac ggtgccgtgc gaggtgatcg
     2041 gcttctcggg cgaccaggcc ctcgccatgc cgttcggctc gttgcagggc gtgcgccgcg
     2101 gctgcccggc gcatgtgcgc acgcagctcg acggcgtgca gccgtcccag agctggcttg
     2161 gccgtgtcgt cgacgcgctc ggccggccga tcgacggcaa ggggccgctg ccggccggcg
     2221 gtgtgacgta tccgttccgg gccgacccgc cgccgccgca cgcccgccgc cgcgtcgccg
     2281 agccgctcga cctcggggtg cgggcgctca acaccttcct gacaacgtgc cgtggccagc
     2341 gcatgggcat cttcgcgggg tccggcgtcg gcaaatcggt cctgctctcg atgatggcgc
     2401 gcttcacggc tgccgacgtc gcggtgatcg gcctcgtcgg cgagcgcggg cgcgaggtgc
     2461 aggaattcct gcaggacgac cttggcgagg ccggcctggc gcgctcggtg gtggtcgtcg
     2521 cgacctccga cgagcccgcc ctgatgcggc gcaacgcggc cttcctgacc ctggcgctgt
     2581 ccgagtattt ccgggaccag ggcgcgtcgg tcctgtgcat gatcgattcg atcacccgct
     2641 tcgccatggc gcagcgcgac atcgggcttg cggcggggga gccgccgacc gccaaaggct
     2701 acaccccgac ggtgttcaac gagctgccgc gcctcctcga gcgggccggg ccgggcacgg
     2761 gggacggcac gatcaccggc ctgttcacgg ttctcgtcga gggcgacgat cacaacgagc
     2821 cggtcgccga cgcggtgcgc ggcatcctcg acggccatat cgtgatggag cgccagatcg
     2881 ccgaacgcgg gcgttatccg gccatcaacg ttctgaagtc cgtgtcccgc accatgccgc
     2941 gctcgtgcga tcccgtttac cgtccgttag tcatgaaggc acggcaggtg ctcgccacct
     3001 attccgatat ggaggagctg attcggctcg gcgcctacag agcggggtct tcggccgagg
     3061 tcgacgaggc cattgccttg tttccggccc tggacgattt tctgtcccaa agtaaggaag
     3121 attcaacctc catcggcgat ggttactctc gtctcgcgga cattctgagc ggtgcgtgag
     3181 agctcttatt agtgttaggc gacggcgagt ggagtaacaa aagatgaagt cgcgggatac
     3241 gctcatccgg ctcaaacgct tccaggtcga cgagaagcgg cggcgggtcg cgcaaatcga
     3301 gatgatgatc gctgagttcg atcgtatggc gaccgagctc aatcgcgaga tctcgggcga
     3361 ggaacagaag gccggtatct cggatccggg gcatttcgcg tatccgacat acgcaaaggc
     3421 ggcgatgcag cggcgcgaca acctgcagcg ctccgccgac gagctcaaag gccagctcga
     3481 ggaagccaag gcggaactcg gcgaggcctt cgaggagctc aagaaggccg agatcctcga
     3541 cgatcgcgag cgcagcgccg aacgggccct ggaaaccgcc cgggaccagg ccgccatgaa
     3601 ccagatcggc ctgcagcgcg ctgcccgtcc cagctactga cattcgctga catgaaaaag
     3661 agcggggtaa cccccgctct aattgcgccg ggcccgccag cgcccgagcg tcagtctcgg
     3721 cgtcagccgg gccccggcac gcatccccgt tgcggcatga gcgatcggcg gcacgtgcgg
     3781 agccgcggta agcgggaggt ggcccttcag acggggatcg tcggcgatct cgacggcccg
     3841 cttgtaaggc cggaagcccg agcggatata gaactgcagc gcgcgcgggt gatcgaggct
     3901 gcaggtatgc acccagaggc gcctgatcgg ctgctcccag gcgcgccgga tcgcctcgtt
     3961 catcaggatg cgcccccagc cgcggccgat cgcttccggg atgacaccga agaaggccag
     4021 ctcgcatgtc ccgggctcgc ggaagtcgag ctcgagaagc ccgatatccg cgccgttctc
     4081 gtgcatggcg taggcctgca cggccgggtg atcgacgatc gaacgcagga cagtgtcgtc
     4141 catgacaagg cggctgaacc acagccaggg ctccccgacc tggcggaaca gaccgcgata
     4201 gcgggcgagg tcccccgtca acggggccat cccccagtcc tgcctggcca ccgcctgcgg
     4261 ttgtggcggc gcgtgcatct cgagataggt caccaccgcc gcgatcgtgc cgggcggcag
     4321 gtcggtgtaa ccgctgatct tcatgggctc atggtccggc tcggtggcgc agcgggccga
     4381 ggccatcgct ctctacacca ggatgacggc acctgcgacc aatcgttgcc gcggtccggc
     4441 acaggagaag caggccgcag ccgcccttga gtgcgaatgg accggcacga tctggcaacg
     4501 gtccaccgca aggcgcgcgc tccgacgagg atcgggaccg gcgtgccgat ggccgatcgt
     4561 ggctattgtg tgacccgtcg acggggcggc gccacccacg ccgcctcaac gcggcgcgag
     4621 agcaggcgtc gcaaattccc ttgcgggtca cggcccgctc gggcacagag gactggggag
     4681 ggagtcggcc gatctcatga agcatgtgcg tgagttcgtg tggcccatca tcgggctgct
     4741 cgcagtcgtg gtgtcgggtt ggctcctcta tcatgagctt cgcggtctct cgatcgaggc
     4801 gctctggtca agcctgaggg cgatcccgac gcatcaatat cttcttgcgg cggcctcgac
     4861 cctcgtcgcc tacgcggcgc ttgcctggta cgaccgtatc gccctcctgc atctcggcct
     4921 ccaccacatc tcgtggtggt tcgtctcggt ctgctccttc acgacctacg ccctgtcgca
     4981 caacatcggc gcatcggtgt tctcgggcgc cctcgtgcgt taccgggcct acacctccaa
     5041 gggacttagc gctccccagg tggcggtgct ggtggcgctc tgctccttca ccttcggcct
     5101 cggcacggtg ctgctcggcg gcgtcgtgct gaccatctac cccgagctct tctcgcgctt
     5161 gccggaggcg atcccggcct tcctgcggga ggccaccacc gcgcgtgtcg tcggcctcgc
     5221 catgctggcc ttcgtggccc tctacgtggt cgggtcaatc ctgcatctgc ggccactatg
     5281 catccgtgac ttcaagctcg aatatccgcg tcccgccgtg atggtgcgac agctcatcgc
     5341 tgccccgctc gagctgctcg gcgccgcggg catcatctat ttcgcgcttc cggagaccgg
     5401 caatcccggg ttcgtcgccg tgctcgccgc gttcctcgcc tcgttctccg cggcgctcgc
     5461 cagccatgcg ccgggcggcc tcggcgtgtt cgagctcgtc ttcgtcgcca tcatgccgga
     5521 tgtgccgaag gcggaggtgc tcgccgccct gatcatcttc cgggtgttct acctgctgat
     5581 cccgttcgcc atggcgatca tcgtcgtgct cctgttcgag cgcgcccgcg tcgcgcaggc
     5641 gtggcgcgag cgcaccgccg cgcaaggcct gtcgccgatc ccttcgccgc tgcacatgcc
     5701 ctcggccacg ccggctacgg ccgctcatcc ccatccagcc gcgcccgctc ccgcggcgac
     5761 caccgcgccg ccgggtgtcg cgagccattg atccgggcgc ccgcgtccgc gggcggcgtc
     5821 tggccttcgg cctcgcgacc gtcctcggcc tggcgccgcg cggcttcttc attccgtacc
     5881 gttatgccgg gtcggcgaac cccgccggtt atccggcgct gcacgcgctg ttcgatgccg
     5941 cgacggagtc gatcgacgga ctcatgcagg cgatcgaggc acatcgcgac gatctgcagc
     6001 gcatcgccgc ggacggcggc ccggcgcggt tcgatcagga ttggttcccc cggctcgatg
     6061 cagcggcgct ctacgcgctc gtgcgacgtg agcgcccgcg gctgatcgtc gagatcggat
     6121 ccggccattc gacccggttt ctcgcccgcg ctatcgccga cggcgggctc gcgacggagc
     6181 tggtgtgcat cgatcccgcg ccgcgcgccg cgctcgacgg gctcaacctg cgtcaccgtc
     6241 agcacctcct gtccgaggct gatgcgggcc tgttcgaaac gctcgcgccg ggcgacatcc
     6301 tgttcatcga ttcgagccac gtcgccatgc cggggaccga tgtcgaccgg ctctttctcg
     6361 acgtcctgcc acgactcgcg cgcggcgttc tggtgcatgt gcacgacgtc ttcctgccgg
     6421 atgcctatcc cgcggcgtgg acatggcgcg gctacaacga gcagctcctc gccggcgcgc
     6481 tgttgcaggg caggggctac gagatcgtat tcgccagcca ctacgtcgcg gcgcattgcc
     6541 cggcgcaggt ggagcacagc gttttggcgc aactgccgct gctgcctggc gcctacgaaa
     6601 cgagcctgtg gctcaggaaa agctgacctg ccaagccgcg cagcggcttc gggctcacac
     6661 gctgccgacg gtcctgagcc gcgcgcgcgg atggatctcg ccctggctga ggaccggcgt
     6721 ctcgcggcgg aagcgctcga tgatcgaccg cacgaagggc cgcgagccga ccgaggtgac
     6781 gagcaccggc atctcgccca tgcgcgccgc ctcctcgaag cggtcgcgga ccgtgttcac
     6841 gaactcgctg agccgcgacg gctgcatcgc caggtggcgg tcgtcgccgt ggccgacgat
     6901 cgattccagg aatgcctgct cccattgcgg cgacagggtg atgatcggga tgtggccgcc
     6961 cggcgcgaca tattgcgcgc agatctgtcg cgccaggcgc gaccgcacgt gctcggcgat
     7021 gtcgcgcgga ttcttgagcg aggcgcacac ctcggaaatg ccttcgatga tggtgccgag
     7081 gtcgcggatc gagacgcgct cggtgagcag gtattggagg acccgctgga tgccggtggt
     7141 cgagatctgc gccggcacga tctccttgat cagctcggta tgctccttgg gcagctcctt
     7201 gagcagcttt tgcacctcga catgggagag cagctccgac atgtgcgcct tgatcacctc
     7261 ggcgaggtgc gtcgacatca cggtcgcggc gtccaccacc gtgtagccgc gcaattgcgc
     7321 ctcatcgcga agccccgaat cgagccacgt gcacggcagc ccgaaagtcg gctcgagcat
     7381 gtgatggccc gggagctgca cctgggcgcc catcgggtcc atcgccataa acaggttcgg
     7441 gaacaccgag ccttcgccgg cgtcgatctc cttgacgcgg atggagtagg cgttggcctc
     7501 gagatgcacg ttgtcgagga tgcgcaccga gggcatcacg aagccgacct cggcagccag
     7561 ctggcggcgc agcgccttga tctgctcggt caggcggtcg gagccgtccg gggaattgac
     7621 cagcggcagc agcgcgtagc cgatctcgat cttgagatcg tccatcttga ggacgtcggc
     7681 gatcggctcc tccttgggag cgccgggggc gccggcctcg gccgatgcgc cgccggcagc
     7741 gatgcccagg
//
LOCUS       DATAIQ010001191         2353 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_87018, whole genome shotgun sequence.
ACCESSION   DATAIQ010001191 DATAIQ010000000
VERSION     DATAIQ010001191.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2353)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2353)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2353
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_87018"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1250)
                     /gene="glmM"
                     /locus_tag="VHN20_19745"
     CDS             complement(<1..1250)
                     /gene="glmM"
                     /locus_tag="VHN20_19745"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020094009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008966 - phosphoglucosamine mutase
                     activity [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HEX2728062.1"
                     /translation="MTRKHFGTDGIRGRANGVITPELALKVGQAAGLLFVRGDYRHRV
                     VIGKDTRLSGYMIETALVAGFTSVGMDVLLLGPMPTPAVAMLTRSMRCDLGIMISASH
                     NPYEDNGIKIFGPDGFKLSDDVEHEIETLLASDLTRRLADSAQLGRAKRIESVHARYI
                     EFAKRTLPRQLDLEGMRVVVDCANGAAYKVAPETLWELGAEVIAIGVEPDGFNINRDV
                     GSTAPAALIRRVRELRADIGIALDGDADRVLVVDEKGQLVDGDQLMAVVARSWREDGR
                     LSQPGVVATIMSNLGLERYLGGLGLQLIRTAVGDRYVLEHMREHGYNLGGEQSGHIIM
                     SDYTTTGDGLIAVLQLLSVVKRLNKPVSEVCHCFEPLPQVLKNVRYKQGQPLQDNSVV
                     TAIESARQRLGNQGRLVIRPSGTEP"
     gene            1439..>2353
                     /locus_tag="VHN20_19750"
     CDS             1439..>2353
                     /locus_tag="VHN20_19750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2728063.1"
                     /translation="MRHGKFPVVAALVLLGAGTAAAREDYLAVGGALLKAFPRGEEVC
                     YGVTRNPAYLAENPRLRMTAFHLFKDFDPDPLKEQVDPPRWRQLEEDRVSTTPRSLSV
                     RVRFRNLKGVYHQEVECSGTGANGFGCWRDCDGGGFGVKTAGRSLVVEQDGVSGLRLQ
                     SSCDPDDEGSNMHLDAKLDGASFRLDPLPQSVCRAERDAARPVWVKSGDPLRARFEKR
                     ADVCHARTYDAAHLRAHPDQKVVAIALRTIGRLKKQSPDDQGSPALEVRLSVKLRDGG
                     TRTKTADCFPGEYTFDCANTQFRLRRAGP"
BASE COUNT          394 a          768 c          792 g          399 t
ORIGIN      
        1 ggctcggttc cggacggccg gatcaccagc cggccctggt tgcccaggcg ctggcgcgcc
       61 gattcgatcg cggtgacgac cgagttgtcc tgcagcggct ggccttgctt gtagcgcacg
      121 ttcttgagga cctgcggcaa cggctcgaag cagtggcaga cctcgctcac cggcttgttg
      181 agtcgcttga ccacggacag cagctgcagg acggcgatca gcccgtctcc ggtcgtcgtg
      241 tagtcggaca tgatgatatg gcccgactgc tcgccgccga gattgtaacc gtgttcgcgc
      301 atgtgctcga gcacgtaacg atcaccgacg gccgtgcgga taagctgcag gccgaggccg
      361 ccgagatagc gttcgaggcc gagattggac atgatcgtgg ccacgacacc aggctgcgac
      421 aggcgtccat cctcgcgcca cgaccgcgcc acgacggcca tcagctggtc accgtcgaca
      481 agctggcctt tttcgtcgac cacgagcacg cggtcggcat cgccgtcgag cgcgatgccg
      541 atatcggctc gcagctcgcg cacgcggcgg atcagcgccg ccggcgccgt cgagccgacg
      601 tcgcggttga tgttgaaccc gtcgggttcg acgccgatgg cgatgacttc ggccccaagc
      661 tcccacaggg tttcgggggc gaccttgtag gcggcaccgt tggcgcaatc gacgaccacg
      721 cgcatgcctt ccaggtcgag ctggcgcggc agcgtgcgct tcgcgaactc gatatagcgg
      781 gcatgcacgc tctcgatgcg cttggcccgg ccgagctgcg ccgaatcggc gagccgccgc
      841 gtcagatcgg aggccagcaa ggtctcgatc tcgtgctcga cgtcgtccga caacttgaag
      901 ccgtccggcc cgaagatctt gatgccgttg tcctcgtatg gattgtgcga ggccgagatc
      961 atgatgccga ggtcgcagcg catggagcgc gtcaacatgg cgaccgcggg cgtcggcatc
     1021 gggccgagga gcaggacgtc catgccgacc gaggtgaacc cggccacgag cgccgtctcg
     1081 atcatgtagc cggacaggcg ggtatccttg ccgatcacga cccggtgccg gtaatcgccg
     1141 cggacgaaca acaagcctgc ggcctggccg accttgagcg cgagctcggg cgtgatcacg
     1201 ccgttggcgc gaccgcgaat tccgtcagtt ccgaagtgct tccgtgtcat aggcgccccg
     1261 ccatacgcga atcaggatgt ttgctgacgc accttcggtg cgaatgctga aggcgtatag
     1321 cattcaatag cgcattgtga cggctttgcg gctcaaaatc gcaggtttgc cttaccgccc
     1381 ggcttatcgg gtggaaaggt taccggagct ttggcgaggg ggtggaggga ggcggatcat
     1441 gagacatggt aagttcccgg ttgtcgcggc cctggtcctg ctgggcgccg gaacggcggc
     1501 ggccagggaa gattatctgg cggtcggcgg cgcccttctg aaggcgttcc cccgcggcga
     1561 agaggtctgc tacggggtca cccgcaatcc cgcctatctc gccgagaatc cgcgcttgcg
     1621 gatgaccgcc ttccacctgt tcaaggattt cgatccggac ccgctgaagg aacaggtcga
     1681 tccgccgcgc tggcgacagc tggaggagga tcgcgtctcg accaccccgc gcagcctctc
     1741 cgttcgggtg cggtttcgca acctcaaggg tgtctatcat caggaggtgg aatgctccgg
     1801 gacgggggct aacggcttcg gctgttggcg cgattgcgac ggcggcggat tcggcgtcaa
     1861 aaccgccgga cgctcgctcg tcgtcgaaca ggacggcgtg tccggcctga ggctgcaatc
     1921 gtcgtgcgat cccgacgacg aaggctccaa catgcacctc gatgccaagc tcgacggcgc
     1981 cagcttccgc ctggacccgc tgccgcaaag cgtctgccgc gccgagcgcg acgccgcccg
     2041 cccggtctgg gtgaagagcg gcgatccgct gcgcgcgcgc ttcgaaaaac gcgccgatgt
     2101 ctgccacgca cgcacctacg acgcggcgca tctcagggcg catccggatc agaaggtcgt
     2161 cgccattgcg ctgcgcacca ttggccgcct gaagaagcag agcccggacg accagggctc
     2221 gccggccctc gaggtgcggc tgtcggtgaa gcttcgcgac ggcggaacga ggaccaagac
     2281 ggccgactgc ttccccggcg agtatacctt cgactgcgcc aacacccagt tccggctgcg
     2341 tcgcgccggg ccg
//
LOCUS       DATAIQ010001192         3070 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_184551, whole genome shotgun sequence.
ACCESSION   DATAIQ010001192 DATAIQ010000000
VERSION     DATAIQ010001192.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3070)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3070)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3070
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_184551"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..945
                     /locus_tag="VHN20_19755"
     CDS             <1..945
                     /locus_tag="VHN20_19755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-glutamate dehydrogenase"
                     /protein_id="HEX2728064.1"
                     /translation="SKVPDDPYLSRELERYFPETLRELFPEAIGAHRLRREIIATQLA
                     NAIVNRGGPTIVTRLVDQTGADTPTIAAAYAATRDSFALSEINDAIDGLDGKIPGALQ
                     LKLYADVQELLLSRLVWFIRHADFARDSLDTIVSRYRAGVAEIEAGLTGLMSAPARQA
                     WQERRDELSRQGVPDDVAGRLAALQDLVAAPDIVLVAQRTGHPVIEIAATHFAVDDLF
                     QLGALSGAARHIPVTDYFDRLALDRAIDALAAAHRKLTAEVVAAGPPGPEAVAAWRNT
                     RAAEIDRLRAAVDNIVSTGLTLSKLMVAASLLDDLAKG"
     gene            949..2427
                     /locus_tag="VHN20_19760"
     CDS             949..2427
                     /locus_tag="VHN20_19760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX2728065.1"
                     /translation="MTHASSPVSEASTEDPRSPAKRGAKPLRASGTITAPPRAIAGWI
                     LFDWACQPFFTLVTTFVFAPYFASGLAPNPVEGQALWGYATATAGLMLAALSPVLGSI
                     ADARGPKKPWIAACGAVLVAACALLWFAAPGTRHGIPVALVAFAVATIAAEVAAVFNN
                     AMMPYLVPPERLGRLSGAGWAAGYAGGLVSLVVVLGFMAADPQTGTTAFGTRPIFGLD
                     PALREGDRVTGPLAAVWFVVFVVPMFLFTPDAPPTGRGLSDAVRRGLGQLAATVAEAR
                     RDAGIARFLLANMVYQDGLVALFAFGGIYGAGVFGWSTVELGLFGILLTVTGTIGALV
                     GGRLDDRFGARRVVLGALTILVLVCFAILSLGREHVLFIVPVAPPAPGDGLYGSLPEQ
                     LFLGLGLVIGAVAGPLQAASRSLLARLAPAAEAGRYFGLLALSGKVTSFLAPFLVALA
                     TDLAGTQGAGPAVLILFFVTGAVMLAGRRPRQRVNAGSGGGR"
     gene            complement(2399..3070)
                     /gene="purH"
                     /locus_tag="VHN20_19765"
                     /pseudo
     CDS             complement(2399..3070)
                     /gene="purH"
                     /locus_tag="VHN20_19765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012752887.1"
                     /note="involved in de novo purine biosynthesis; internal
                     stop; incomplete; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
BASE COUNT          391 a         1111 c         1062 g          506 t
ORIGIN      
        1 agcaaggtgc cggacgatcc ctatctctcg cgcgagctcg agcgctactt cccggagacc
       61 ctgcgcgagc tgtttcccga ggcgatcggc gcgcatcgcc tgcggcgcga gatcatcgcc
      121 acgcagctcg ccaacgcgat cgtcaatcgc ggcgggccga ccatcgtcac gcggctcgtc
      181 gaccagaccg gggcggatac gccgaccatc gccgccgcct atgcggcgac gcgcgactcg
      241 ttcgccctca gcgagatcaa cgatgccatc gacgggctcg atgggaagat acccggcgcg
      301 ttgcagctca agctctacgc cgacgtgcag gagcttctgc tgagccgcct cgtgtggttc
      361 atccggcacg cggatttcgc ccgcgactcg ctcgacacga tcgtcagccg ctaccgcgcg
      421 ggagtcgccg agatcgaagc cggactgacg ggcctgatgt ccgcgcccgc ccgccaggcc
      481 tggcaggagc ggcgcgacga gctctcgcgg cagggcgttc ccgatgacgt cgcagggcgg
      541 ctggcagctt tgcaggatct cgtcgccgcg ccggacatcg tgctcgtcgc gcagcgcacc
      601 gggcacccgg tcatcgagat cgccgcgacg catttcgcgg tcgacgacct gttccagctc
      661 ggggcgctgt cgggcgccgc gcgccacatt cccgtgaccg actatttcga ccggctcgcg
      721 ctcgaccgcg caatcgacgc gctggccgcg gcgcatcgca agctgacggc cgaggtagtg
      781 gcggcagggc ctcccgggcc ggaagccgtg gcggcctggc ggaacacccg cgctgccgag
      841 atcgaccgcc tcagggctgc cgtcgacaat atcgtgtcca cgggcctgac cctttcgaag
      901 ctgatggtgg cggcgagcct cctggacgat ctcgccaaag gctgacgcgt gacgcacgcc
      961 tcatcgccgg tcagcgaagc gtcgaccgaa gacccgcgat cgccggccaa acgcggagcc
     1021 aagccgctgc gcgcctccgg aaccatcacc gcgccgccac gggcgatcgc ggggtggatc
     1081 ctgttcgact gggcatgcca gccgttcttc acgctcgtca cgacattcgt cttcgccccg
     1141 tatttcgcat ccggccttgc ccccaacccg gtcgagggac aggcgctctg gggctacgcc
     1201 acagcgacgg ccgggctgat gctcgcggcc ctgtcgccgg tgctcggcag catcgccgac
     1261 gcgcgcgggc cgaagaagcc gtggatcgcc gcctgcggtg ccgtgctggt ggcggcctgc
     1321 gcgctgctgt ggttcgcggc gcccggaacg cgccacggca ttcccgtcgc gctcgttgcc
     1381 tttgccgtcg ccacgatcgc agccgaggtc gcggccgtgt tcaacaacgc catgatgccg
     1441 tatctcgtgc cgcccgagcg cctcggccgg ctgtcgggcg ccgggtgggc tgcgggctac
     1501 gccggcggcc tcgtctcgct tgtcgtcgtt ctcggcttca tggccgccga ccctcaaacc
     1561 ggcacgacgg cgttcggcac gagaccaatc ttcggtcttg atccggcatt gcgcgaaggc
     1621 gaccgcgtca cgggcccgct cgccgccgtg tggttcgtgg tcttcgtcgt gccgatgttc
     1681 ctgttcacgc ccgatgctcc gccgaccggg cgcgggttgt ccgacgcggt gcggcgcggc
     1741 ctcggccagc tggccgcgac ggtcgccgag gcacgccgcg acgccggcat tgcccggttt
     1801 ctgctcgcca acatggtcta ccaggacgga ctggtggcgc tgttcgcgtt cggcggcatc
     1861 tatggcgcgg gcgtcttcgg ctggtccacg gtcgagctcg gcctgttcgg catccttctc
     1921 accgtgacgg gcacgatcgg agcgctggtg ggcggccgtc tggacgaccg cttcggcgcg
     1981 aggcgcgtgg tcctcggcgc gctgacgatc ctcgtgctgg tttgcttcgc cattctttcg
     2041 ctcggccgcg agcacgtgct gttcatcgtg ccggttgcac cacccgcgcc cggcgacggc
     2101 ctctacggca gccttccgga acagctattc ctcgggctcg gcctcgtcat cggggcggtg
     2161 gccgggccgc tgcaggcggc gtcgcgcagc ctgctggcgc ggctcgcgcc ggccgccgag
     2221 gcggggcgct atttcggcct gctcgccctg tcgggcaagg tcacctcgtt cctggcgcca
     2281 ttcctcgtcg cgctggcgac cgatcttgcc ggcacgcaag gggccggccc cgccgtcctg
     2341 atcctgttct tcgtgaccgg cgccgtgatg ctggcgggaa ggcgcccgcg gcaacgggtc
     2401 aatgccggaa gtggcggtgg ccggtgaaca ccatggcgag gccggcctcg tcggcggcct
     2461 tgatcacttc gtcgtcgcgc accgacccgc cgggctggat cacggccgtg gcgcccgcct
     2521 cggccgccgc caggagccca tcggcgaagg ggaagaatgc gtcggacgca accaccgaac
     2581 ctttcgcgag gctttcggac tgcccggcgg tccgcgccgc ctcggcggcc ttccaggcgg
     2641 cgatgcgggc ggaatcgacc cggctcatct ggcccgcacc cacgccgacg gtggcgccgt
     2701 ccctggcgta gacaatggcg ttcgacttga cgtgcttggc gacgcggaac gcgaatgtca
     2761 ggtcggcaag ctcctggttt gacggcgccc gccgcgtcac gaccttcagc ggcatgtcgt
     2821 ccacgaccgc gttgtcgcgc gcctgcgcaa ggaagccgcc gccgacggtg cgcaggctga
     2881 ggccgggcgc tcgcgggtcg ggcagttagc ccgcgagcag cagccgcaga ttcttcttgg
     2941 cgccgatgat cgcgatcgct tcctcgctcg cgtcgggcgc gatgatcacc tcggtgaaga
     3001 tttcgacgat ccttctcgcc gcctcggcgt cgatcgggcg gttcaaggcg acgatgccgc
     3061 cgaaggcgga
//
LOCUS       DATAIQ010001193         2843 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_88162, whole genome shotgun sequence.
ACCESSION   DATAIQ010001193 DATAIQ010000000
VERSION     DATAIQ010001193.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2843)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2843)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2843
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_88162"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(49..1254)
                     /locus_tag="VHN20_19770"
     CDS             complement(49..1254)
                     /locus_tag="VHN20_19770"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018429127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX2728066.1"
                     /translation="MRRIRRRRRLVAAAFVAPLLVFTLLVFVVPIGDMLRRSFWNAEL
                     AAAWPTVRAAMAEWHSEGAHGVPPDPVFAALAEDLRKTYGTPALATAARRLNYDLENG
                     RSLVVNTGRRVAQLDGPKGTWAETLTAIDPRWSTHETWAAIDRARVPFTDFFLLAALD
                     LQRDEGQIVRKPANQAIYLEVLGRTFSISLAVTLACLVLGFPVAYVIAAQPPSRANLL
                     LMLVLLPFWTPLLVRTAAWVVVLQENGLANQLLAGLRVIDHPLRLIYNRTGVLVAMTH
                     VLLPFMILPLYSVMKGVPPGLMRAALSLGAPPFTAFRRVYLPQVMPGVAAGALLVFIL
                     ALGYYITPALVGGGADQMISTFVAFNTTDTANWSLAAALGTVLLVATFVLFAVATRLG
                     ARYRLGVLG"
     gene            complement(1323..2366)
                     /locus_tag="VHN20_19775"
     CDS             complement(1323..2366)
                     /locus_tag="VHN20_19775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008974718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX2728067.1"
                     /translation="MKTLIKFGAAAAAVLAGASLAHARDLTVTSWGGAYQNAQTEAYF
                     NPFRQKAGMPLIDESWDGGIGVLRTKVEGGNATWDVVQVESDELAVGCDEGLYEKLDF
                     DKIGGKDRYIKEAVHACGVGAIVYDFVLAYDKGRLKDAPKGWADLFDTQKYPGKRALR
                     GGPKTTLEIALMADGVPPEKVYEVLKTPAGVDRAFKKLDSVKKDLIFWKAGAQPPQLL
                     ASGEVVMTSAYNGRIDAANRDDKRNFGIVWSQPLFTIDSWVILKNSPNKDNAYKLLDF
                     MGQAENQAKLPLKIAYGVTNRDANKSIPAERLKDLPTAPENFKTAIEISDEFWLENID
                     RLTERFNKWSASQ"
     gene            complement(2397..>2843)
                     /locus_tag="VHN20_19780"
     CDS             complement(2397..>2843)
                     /locus_tag="VHN20_19780"
                     /inference="COORDINATES: protein motif:HMM:NF019998.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TOBE domain-containing protein"
                     /protein_id="HEX2728068.1"
                     /translation="QQLATPSALYEAPETSFVARFIGENNSPSGRILASAGGVCRVLL
                     DQGHEVEAAAIRVGAPDGRTTLSIRPERVVIGAEAERVPTRLPGRVRELIYVGDHLRA
                     YIAVGAQEFIVKIPNSRHVPLRVGDDTLVGWHTADCRALDPLEVKG"
BASE COUNT          444 a          960 c          994 g          445 t
ORIGIN      
        1 acaaagcggc gcgcgccgca gcctggctgg cctcgtgcgg cccaaaggtc atccgagcac
       61 cccgaggcgg tagcgcgcgc ccagccgggt cgcgaccgcg aacagcacga aagtggccac
      121 gagtagcacc gttccgagcg ccgctgcgag cgaccagttg gcggtgtccg tcgtgttgaa
      181 cgcgacgaag gtgctgatca tctggtcggc gccgccgccg acgagcgcgg gcgtgatgta
      241 gtagccaagc gccaggatga agacgagcag ggcgccggcg gcgacgcccg gcatcacctg
      301 gggcaggtag acgcggcgga aggcggtgaa tggtggggcg ccgagcgaca gcgcggcgcg
      361 catcaggccc ggcggcacgc ctttcatcac gctgtagagc ggcaggatca tgaacggcag
      421 gaggacgtgc gtcatcgcca ccagcacgcc cgtgcggttg tagatcaggc gcagcgggtg
      481 atcgatcacg cgcaagccgg cgagcaactg gttggcgagc ccgttctcct gcagcacgac
      541 cacccatgcc gccgtgcgca cgagcagcgg cgtccagaac ggcagcagca cgagcatgag
      601 cagcaggttg gcgcgcgagg gcggctgcgc cgcgatcacg taggccaccg gaaagccgag
      661 cacgaggcac gcgagcgtga cggcgagcga gatcgagaag gtgcggccga ggacctcgag
      721 atagatcgcc tggttcgccg gcttgcgcac gatctgaccc tcgtcgcgct gcaggtccag
      781 ggcggcgagc aggaagaagt ccgtgaacgg cacgcgcgcc cggtcgatcg cggcccaggt
      841 ctcgtgcgtg ctccagcggg gatcgatggc ggtcaatgtc tccgcccagg tgcccttggg
      901 cccgtcgagc tgcgcgacgc ggcggccggt gttgacgacg agcgagcgac cgttctcgag
      961 gtcgtaattg aggcgccgcg ccgcggtggc gagcgccggc gtgccgtagg tcttgcgcag
     1021 gtcttcggcg agggctgcga agaccggatc gggcggcacg ccgtgcgcgc cttcggaatg
     1081 ccattcggcc atcgccgcgc gaacggtcgg ccacgcggcg gcgagctcgg cgttccagaa
     1141 actgcgccgc agcatgtcgc cgatcggcac gacgaagacc agcagcgtga agacgaggag
     1201 cggcgcgacg aaagccgccg cgacgagccg cctgcggcgg cggatgcgcc gcaagctccg
     1261 tctcagcgcc cgcgcgtcgg ggccggccgc cccctccccg gctgcgcgcg ccacggcgag
     1321 tgctactggc tcgccgacca cttgttgaag cgctcggtca ggcggtcgat attctcgagc
     1381 cagaactcgt ccgagatctc gatcgcggtc ttgaagttct ccggcgcggt cggcagatcc
     1441 tttagccgct cggccgggat cgatttgttg gcgtcgcggt tggtcacgcc ataggcgatc
     1501 ttcagcggca gcttggcctg gttctccgcc tgccccatga agtcgagcag cttgtaggcg
     1561 ttgtccttgt tgggcgagtt cttgaggatg acccagctgt cgatcgtgaa cagcggctgg
     1621 ctccagacga tgccgaagtt gcgcttgtcg tcccggttgg ccgcatcgat gcggccgtta
     1681 taggcggagg tcatcaccac ttcgccagac gcgagcagct gcggcggctg cgcgcccgcc
     1741 ttccagaaga tcagatcctt cttgaccgag tcgagcttct tgaaagcccg gtcgacgccg
     1801 gccggcgtct tcagcacctc gtagaccttc tccggcggca cgccatcggc catcagcgcg
     1861 atctcgaggg tggtcttggg gccgccgcgc agggcgcgct tgccaggata tttctgcgtg
     1921 tcgaacaggt cggcccagcc cttcggcgcg tccttcagcc ggcctttgtc gtaggcgagc
     1981 acgaagtcgt agacgatggc gccgacgccg cacgcatgca ccgcctcctt gatgtaccgg
     2041 tccttgccgc cgatcttgtc gaaatcgagc ttttcgtaga ggccctcgtc gcagccgacg
     2101 gcgagctcgt ccgactcgac ctgcaccacg tcccatgtgg cgttgccgcc ctcgaccttc
     2161 gtgcgcagca cgccgatgcc gccgtcccac gactcgtcga tcagcggcat gcccgctttc
     2221 tgccggaacg ggttgaaata ggcctcggtc tgggcgttct ggtaggcgcc gccccacgag
     2281 gtcacggtca ggtcgcgggc gtgggcaagc gaggccccgg ccagcacggc ggccgccgcg
     2341 gcgccgaatt tgatgagcgt cttcatgact tctccctttc tccttccccg cgcccgtcag
     2401 cctttcacct cgagcggatc gagcgcccgg caatccgccg tgtgccaacc gaccagggtg
     2461 tcgtccccga ccctgagcgg cacatggcgg ctgttgggga ttttcacgat aaactcctgt
     2521 gcgccgaccg caatgtaggc ccgcaggtgg tcgcccacat aaatcagctc gcgcacccgg
     2581 cccggcaggc gggtcgggac gcgctccgcc tcggcgccga tcaccacgcg ctccgggcgg
     2641 atcgaaagcg tcgtgcgccc gtcaggggcg ccgacccgga tggcggcggc ctccacctca
     2701 tggccctggt cgagcaggac ccggcagaca cccccggcag aggcgaggat gcgccccgac
     2761 gggctgttgt tctcgccgat gaagcgcgcc acgaagctgg tttccggcgc ttcatagagg
     2821 gcagacggcg tggcgagctg ctg
//
LOCUS       DATAIQ010001194         2193 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_89054, whole genome shotgun sequence.
ACCESSION   DATAIQ010001194 DATAIQ010000000
VERSION     DATAIQ010001194.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2193)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2193)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2193
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_89054"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(178..789)
                     /locus_tag="VHN20_19785"
     CDS             complement(178..789)
                     /locus_tag="VHN20_19785"
                     /EC_number="2.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013500263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0018104 - peptidoglycan-protein
                     cross-linking [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HEX2728069.1"
                     /translation="MPPLRSLLILACAPLGACNVVNAPPHALLATAASGYARYEPGDL
                     PDDRLLVTTRKPEMLPQVVPYRGDEPPGTIVIKTSERRLYLVLGDQTAVRYPVGVGRA
                     GKQWQGRAEIDGAYIQPAWVPTDEIRRDNPDLPDVIPGGAPNNPMGARALTLSGGKYA
                     IHGTNRPESVGTYASYGCIRMLNEDIVDLFKRVHVGTEVVVAL"
     gene            complement(1104..1418)
                     /locus_tag="VHN20_19790"
     CDS             complement(1104..1418)
                     /locus_tag="VHN20_19790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2728070.1"
                     /translation="MSLTGRFNFRKTWFGGLALMVEEEIKPLLGRGEKLKRRWRRATL
                     IDLAQPEMRALIDLRFQPQYLARSPVRAAPAAPASNGTGAELPPPSPAAGQEEGPQRT
                     TH"
     gene            complement(1557..1877)
                     /locus_tag="VHN20_19795"
     CDS             complement(1557..1877)
                     /locus_tag="VHN20_19795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007564597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2728071.1"
                     /translation="MSLTGRFNFRETWLTGLALDVEEEVKPRFGGAGKLTRRWRRAKL
                     TDLERPEMRDLTELRFRLQFLARAPQAAAVAPSAAENVAGDVSEGASAPAGSAAPRPQ
                     RVSH"
BASE COUNT          330 a          716 c          773 g          374 t
ORIGIN      
        1 ttgtgcgaat gttgccctcg ggcttgaccc gcgagcctag ccgatacgct gtccccgcgc
       61 atgcggagat ccggatgtcg gacgccgatc ctcgccgggc gggaccggcc gccggcacaa
      121 gaaaaccagg ctgtcgcctg gctttcttac tccgctcaat ctcgaaatcg gatcacctta
      181 cagcgcgacg accacctcgg tgccgacatg gacgcgcttg aacaggtcga cgatgtcctc
      241 gttgagcatg cggatgcagc catacgaggc gtaggtgccg accgattccg gccggttggt
      301 gccgtgaatg gcgtatttgc cgccggacag ggtcagggcg cgggcgccca tcgggttgtt
      361 cggggcgccg cccgggatca cgtcgggcaa gtcggggttg tcgcgcctga tctcgtcggt
      421 cggcacccag gcgggctgga tataggcgcc gtcgatttcg gcgcggccct gccattgctt
      481 gccggcccgg ccgacgccga ccggataacg cacggccgtc tggtcaccga gcacgagata
      541 cagacgccgc tcgctggtct tgatgacgat cgtgccgggc ggttcgtcgc cgcgataggg
      601 cacgacctga ggcagcatct cgggcttgcg cgtcgtgacg agaaggcggt cgtccggcag
      661 atcgccgggc tcatagcgcg cgtatccgct cgccgcggtt gccagcaagg catgcggcgg
      721 agcgttgacc acattgcagg cgccaagcgg cgcgcaggca aggatgagca gggaacgcaa
      781 cggaggcatg gcgtcgggtg gctcggagat gagaagaatt taaccttttg ctagcagcta
      841 tcgggccggt gaggcaatcc gcggaggctg atcggaggcc ctgccaagct tcgcgcagtg
      901 ccaagagtct ctttttggcg acagtatccc tgagagctgt ccggccgggg ccgcgcccgg
      961 tccggggaaa gggcctcggt ccggccacga tttaatcccg ccgggcattc acccatttca
     1021 ggacgcgccg gagcgctgat gccccatcac gttcgggaga agccttgtcc ggcggagtgc
     1081 ttcgtcactc cgccgggtcg tgctcagtgc gttgtgcgtt gcgggccttc ttcctggcca
     1141 gccgcaggcg aggggggcgg cagctccgcg cctgtgccgt tcgaggccgg cgccgcaggc
     1201 gccgcgcgga cagggctgcg ggcgaggtat tgcggctgga agcgcaggtc gatcagggcg
     1261 cgcatctcgg gctgggcgag gtcgatcagc gtcgcgcgcc gccagcgccg cttcagcttc
     1321 tcgcctcggc cgagcagcgg cttgatctct tcctcgacca tgagcgcgag cccgccaaac
     1381 cacgtcttgc gaaaattgaa cctgccggta agcgacatcg cctcctcctg agcccagcgg
     1441 ggtgcttcgt gatgcgcggc ttttgatggt cgggggacga ctgccgcagg caatcaacct
     1501 gcaaggcggt tgcaggttcc gccgctggaa tcacgacaat gcgacggtag gttgcgtcag
     1561 tggctgaccc gttgcgggcg cggcgccgca gagccggccg gcgccgaggc gccttccgac
     1621 acgtcacccg ccacgttttc cgcagccgac ggcgccaccg ctgcggcctg cggcgcgcgc
     1681 gccaggaatt gcagccggaa gcgcaattcg gtcaggtcgc gcatctcggg ccgctccaga
     1741 tccgtgagct tggcccggcg ccagcgccgc gtgagcttgc cggcgccgcc gaagcgcggc
     1801 ttcacctctt cctcgacgtc gagggcgagc ccggtcagcc aggtttcgcg gaaattgaat
     1861 ctgccagtga gcgacatcgc cacctcctcc gagcgggcgg atggtcgttc gacgcggcgg
     1921 cgcgacatgg tcggagcgcg acggtatcga aagtaggtgc cgggccgccg cacgcggata
     1981 accgttgaag ttgtggcggg ttccgtcgcg cggatcgtgg ccgcgatctc ggcgcctcag
     2041 tgtctttgcg gtcacaggcc aggcttgcga ctcagctaaa gcggcagcgt gcgccgtgcc
     2101 ttgcaggtct gtgcggaaag gcgccgcgcc cttgccggag aacgccgatg cgcaacgtca
     2161 tgctcgccac cctcgtctgc ctcgccgctg ctg
//
LOCUS       DATAIQ010001195         2420 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_89343, whole genome shotgun sequence.
ACCESSION   DATAIQ010001195 DATAIQ010000000
VERSION     DATAIQ010001195.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2420)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2420)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2420
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_89343"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..465
                     /locus_tag="VHN20_19800"
     CDS             <1..465
                     /locus_tag="VHN20_19800"
                     /inference="COORDINATES: protein motif:HMM:NF012573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2728072.1"
                     /translation="NDLVYGEDGDDLLHGQRGNDRAYGSGGNDRLFGGNGDDIVNGGS
                     GHDTISGGEGADLIVGGGGNDRLYGDTAVAAADRFRFFADAGDDRIFDFQDNRDQLEF
                     GGIFASVNDVLLATTASGDDAVIDLGGGNSLTLIDYLAAHTIASLGNDILLF"
     gene            complement(575..1234)
                     /locus_tag="VHN20_19805"
     CDS             complement(575..1234)
                     /locus_tag="VHN20_19805"
                     /inference="COORDINATES: protein motif:HMM:NF021511.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2238 domain-containing protein"
                     /protein_id="HEX2728073.1"
                     /translation="MPASAAHDPHSSEAAMSYPLSLMSLVVAGELLLGIAPKADRITW
                     LMENAPVFVLLPLAVLLQPKLKLSNFTLTVMAIHALVLMIGGHYTYAKVPVGFWVQDA
                     LDLGRNHYDRFGHVMQGFAPAVVLRELLIKTTPLRRGFLLNLTVVSMCLAFSALYELI
                     EWWAALVLGAGADAFLGAQGDLWDTQWDMFLALVGASAAIMIAAPFQDRALRHAERRA
                     R"
     gene            complement(1402..1984)
                     /locus_tag="VHN20_19810"
                     /pseudo
     CDS             complement(1402..1984)
                     /locus_tag="VHN20_19810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003526696.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0008753 - NADPH dehydrogenase (quinone)
                     activity [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
BASE COUNT          469 a          808 c          778 g          365 t
ORIGIN      
        1 aacgacctcg tttacggcga ggatggcgat gacctgctgc acggccagcg cggcaacgat
       61 cgcgcctacg gcagcggcgg caacgacagg ctcttcggcg gcaacggcga cgacatcgtc
      121 aacggcggca gcggtcacga cacgatcagt ggcggcgagg gcgcggacct catcgtcggc
      181 ggcggcggca acgaccggct ttatggcgat acagctgtcg cggctgccga ccgcttccgc
      241 ttcttcgccg atgcaggcga cgaccgcatc ttcgactttc aggacaaccg cgaccagctc
      301 gagttcggcg gcatctttgc cagcgtcaac gacgtgctgc tcgcgacgac cgccagcggc
      361 gacgacgctg tcatcgacct cggcggcggc aacagcttga ccctgatcga ttatctcgcg
      421 gcccacacga tcgccagcct cggcaacgac atcctgctgt tctgaccggt cggcgcgcca
      481 agcgggccgc gagccgcagc gcgttaggct gggcggcagc gcgtcgcgaa gggcgcgtgc
      541 ctgctttccc ccttctccac gcctgccatc atgatcatcg cgcgcgcctc tcggcatgcc
      601 gaagggcccg atcctgaaaa ggcgctgcaa tcatgatcgc cgccgacgcg ccgacgaggg
      661 ccaggaacat gtcccattgc gtgtcccaga ggtcgccttg cgccccgagg aaggcatccg
      721 cacccgcgcc caggacgagg gccgcccacc attcgatcag ctcgtagaga gcactgaagg
      781 ccagacacat cgacaccacg gtcaggttga gcaggaatcc tctccgaagc ggggtcgtct
      841 tgatgagaag ctcccgcagg acgacggccg gagcaaaacc ctgcatgaca tggccgaagc
      901 ggtcgtagtg attgcgcccg aggtccagcg cgtcctggac ccagaagccg acagggacct
      961 tcgcgtaggt gtaatgacca ccgatcatca gcacgagcgc atggatcgcc atcacggtca
     1021 gggtaaagtt gctgagcttc agcttcggct gcaacagcac tgcaagcggc agaagaacga
     1081 aaacaggcgc gttctccatg agccaggtga tgcggtccgc cttcggagct attcccagca
     1141 acagctcgcc ggcgaccacg aggctcatga gagacagagg gtatgacatc gcggcttcgg
     1201 agctgtgcgg gtcatgcgcc gcggaagcgg gcatacgcga gattaacttt cgaatgcgac
     1261 gtgaccaggg ggagagcctc gcaacacgac tcccgattcg cgcctttccc aacgcttccc
     1321 ggcacggcgt agacgcggtt gactggcagc aggcccaggt cgtcggcacg tgccgcgacg
     1381 ccggcgagag ccggtcaagg cttaggcgcc gcgtccgcca tgccggcgca tcacctcgat
     1441 ccaccgcgcg cgtttcttgt cgtcggagag cgcgagcccg aacaggttcg cccggaccgg
     1501 ctttagtgcc ggcaaagcgg aggatgctgc gctcgaaagc gcgtaacccg aaggcgccga
     1561 aataccatcg gtagagcagc accggcatgc ccatcgtcac gacgatgcgc gccgagcgcc
     1621 cggcgagcag ttttttcggg aatccgccct tcttgtactg catcgcgaag ccagggcgga
     1681 agatgtgctc aagaaatccc ttgagcagcg ccggcatcgt cccttgccac agcggaaaca
     1741 ggatcaccca gtggttcgcc cagcgcatgt catcccgagc ttgctccagc gcgggcggca
     1801 acgtgccgat ctcgaactcg gcctgcgtgc gcagcagagg aaagtcgagc tgcgccacct
     1861 cgatgcggcg cacttcgtga cccgcgccga ttgcggcttc tgcataggcg tcggccatcg
     1921 catgcagcag atgcggggtc ccggcgtcgg gatggccttg aatcaccgcg atgcgctctg
     1981 gcatccgcca tcatcccaga gaaagggctt atagagaccc tcaaacaacg tcaggctgag
     2041 atgggcccgc ggacgctaac caggtctacg cggctggaca cgcgccccta tcttcagcgg
     2101 cgccgtggcg ccttgagccg agcgtgtcgg gccagcctgc atcgtcgcac acgccgcgag
     2161 cagcacggcc gctgcgaggg ggaggagcat cactgcgatc gtcaacataa ctagtctccc
     2221 tgacagagga gctacgcgca aggcttcagg tgcggagcgc gcccagacgg gccccagcgc
     2281 catgttccgg cagggcgcac gcgcgccaca caagccgcca cgggcacgcc gacgatgatg
     2341 ctggacacgg tgtcggcaga ggaggagcgt gcttgggaga gcccagcccg tcgtccagcg
     2401 gtgaatctcc caagtccaaa
//
LOCUS       DATAIQ010001196         2620 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_89801, whole genome shotgun sequence.
ACCESSION   DATAIQ010001196 DATAIQ010000000
VERSION     DATAIQ010001196.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2620)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2620)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2620
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_89801"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(43..858)
                     /locus_tag="VHN20_19815"
     CDS             complement(43..858)
                     /locus_tag="VHN20_19815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2728074.1"
                     /translation="MRDTRYAEALKKAASALSVQAQAWHRACRERQLSTGWRVGASLA
                     AAALLCWAAVELCTGGLAPRSTASAEITWIPAEKPWHAPPAAAAQETSAQSRLRSAFE
                     DPRQPLFARLAVLRPDLLPPPFAGEREATDKLWRLREAITDLPDDESLRDVAQVAEPE
                     TTHSVGFAGVWAPTASACSPKSNRRQLLPAVINHEGAWAGEVTCTFRHLRQEGNVAVA
                     SSTCSNGRKRWAANVRIAVEGDRLTWSSERGSQSYVRCNSRVVEGQGAARDPV"
     gene            complement(1340..1816)
                     /locus_tag="VHN20_19820"
     CDS             complement(1340..1816)
                     /locus_tag="VHN20_19820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2728075.1"
                     /translation="MGEAPARGVTPRHGAGTVVLNSFLSNLNGLLPNHHGGWPMRQAA
                     ARNTEQVAEEAAIAAFDSLRTALIRPVEPAEPRVAHVPADKPGDTAVAMRLAGEAIAA
                     ASRSVEAELRRMREQVDEAEARALAAEQRAQEAERLLAEIRDRILGTYPEHRERAA"
     gene            complement(1939..2175)
                     /locus_tag="VHN20_19825"
     CDS             complement(1939..2175)
                     /locus_tag="VHN20_19825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2728076.1"
                     /translation="MRNRPALIASCTSPLLLAGALSICFLVVIFSWPRPREHELALRT
                     VSGPCCDVVVGRAVIDGVDAVPAEARTASISTKR"
     gene            2422..>2620
                     /locus_tag="VHN20_19830"
     CDS             2422..>2620
                     /locus_tag="VHN20_19830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2728077.1"
                     /translation="MLIPARHGQRSVLLRTARGQSGDRKYVLITCGVAALVGTSIFAV
                     VDHSNGAAARASQVPRTSGASQ"
BASE COUNT          392 a          891 c          914 g          423 t
ORIGIN      
        1 caggtctgtt gcgtcctggc tcgcgtgatt cccgatcgaa tgtcagaccg gatcgcgggc
       61 ggcgccctga ccttccacga cacgcgaatt gcaccggacg tagctctgcg agccgcgctc
      121 gctcgaccag gtcagccggt ctccttcgac cgcgatccgc acgttcgctg cccagcgctt
      181 gcggccgttg gagcaggtcg agctcgcaac ggcgacgttg ccttcctgcc tcaggtgccg
      241 gaaggtgcac gtcacctcgc ccgcccacgc cccttcgtgg ttgatcaccg cgggcagaag
      301 ctggcggcga ttcgatttcg gcgagcaggc gctggccgta ggtgcccaca cgcctgcgaa
      361 cccgacggag tgcgtggttt cgggctcggc cacttgcgcc acgtcgcgca gtgattcgtc
      421 gtcgggcaga tcggtgatcg cctcgcgaag ccgccagagc ttgtcggtgg cctcgcgctc
      481 tccggcgaag ggcggcggca gcagatcagg cctgagcacg gctagacgtg cgaacagcgg
      541 ctgcctcgga tcctcgaagg cgctgcgcag acgcgattgg gcgctggtct cctgagcggc
      601 ggcggccggg ggcgcatgcc acggcttctc cgccgggatc caggtgatct ccgcgctcgc
      661 cgtcgatcgc ggcgccaagc cacccgtgca cagttcgacg gccgcccagc acagcagcgc
      721 tgccgcggca agcgaggcgc cgacgcgcca gcccgtcgac agctgccgct cgcggcaggc
      781 gcgatgccat gcctgcgcct gtaccgagag ggccgatgcg gctttcttga gcgcctcggc
      841 atagcgggtg tcacgcaagc cggctgtcgc cgacttgcga gcctgtcgcc acaacgcggc
      901 tgttgccgac gtgcgcatca agcgtcgcaa gtcggcggtc gacttgcgta acaactgcaa
      961 gtcggctgcc gccggcttgc gcaggaattg ccgaacgcgg acaggcccca gttcggcgcc
     1021 ggatgcggcc aggatgcgtc gagtgcgtgt catggggatg cgcgagttgg ggggaggggg
     1081 ctggaaatac gcgcgaggag ggcaggcgcg cgccgcgacg tccgcgtccc gtcactcggg
     1141 ggacggccgc aagcggaatc tggcggcgag atggcgttgc agggctgcgg gctgctcgtg
     1201 gtctgcggtc atcgtgcggt cctccgcggc ccgcaattgc gcacccgtcg tggttaagcc
     1261 cgagtaaacg ggcgcgtcgc catgccggat ctgcgccggc aggccaaaat ttgatggcgt
     1321 gggacgccca cgctgcgcgt tacgcggcgc gttcgcgatg ctcggggtag gttccgagaa
     1381 tccggtcgcg gatctcggcg agcagtctct ccgcctcttg cgcccgctgc tccgccgcga
     1441 gcgcacgggc ttcggcctcg tcgacctgct cgcgcatgcg ccgcagctcg gcctcgaccg
     1501 atcgcgacgc ggccgcgatc gcttcaccgg cgagacgcat cgccaccgcc gtgtcgccgg
     1561 gcttgtccgc cggcacgtgc gccacgcgcg gctcggccgg ttccaccggc cgaatcaggg
     1621 ccgtgcgcag cgaatcgaac gccgcgatgg cggcctcctc ggcgacttgt tcggtgtttc
     1681 tcgctgctgc ctgtcgcatg ggccaacctc catgatgatt cggtaacaat ccgtttagat
     1741 tgcttaagaa agagttaaga acgaccgtgc cggcgccatg acgtggcgtc acgccccgcg
     1801 ccggtgcctc gcccatgatt cggatcgtcg cgcgacgtag tctgattcgg ggcgttggtc
     1861 gaacccgtca tacggcgcac gagggttgca cctcgagact gcggattcgt cgtcacgccg
     1921 cgtcgcccag ctgcccgatc agcgcttcgt cgaaatgctg gcggtgcgcg cttcggccgg
     1981 cacggcgtcg acgccatcga tgacggcgcg gccgaccacc acgtcgcagc aaggcccgga
     2041 gacggtgcgc agggcgagct catgctcgcg cggccgcggc cagctgaaaa tgacgaccag
     2101 gaaacagatc gagagggcac ctgcgagaag aagcggcgac gtgcagcttg cgatcaaggc
     2161 cggtcgattg cgcatcggcg tctccgctcg catgaccgcg agtcggcgca agcttggctg
     2221 taatcgcggc gactctgcgg cagccgcgcg accgagttgc ggagcaaacg atgtgtgtcg
     2281 cgcctgcaca ccgatcgcgg acggcacggg aacggatgac cagaatttgt ggcggacgcg
     2341 acccgcgcag ccttggccgt gacccgcgct cgccaaattc gtctcacaat actgccacgc
     2401 ttgtcgcgag acttcagccg catgttgatc ccagcgcgac atggccaacg ctccgtcctg
     2461 ctcaggaccg cgcgcgggca atcgggtgac cggaagtatg tgctgatcac gtgcggcgtc
     2521 gccgcccttg tcggcacgag catcttcgcg gtcgtggacc actcgaacgg cgccgccgcg
     2581 cgggcttcgc aggtgccgcg cacgagcggg gcgagccagg
//
LOCUS       DATAIQ010001197         3122 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_90232, whole genome shotgun sequence.
ACCESSION   DATAIQ010001197 DATAIQ010000000
VERSION     DATAIQ010001197.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3122)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3122)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3122
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_90232"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            145..426
                     /locus_tag="VHN20_19835"
     CDS             145..426
                     /locus_tag="VHN20_19835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020186806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SWIB/MDM2 domain-containing protein"
                     /protein_id="HEX2728078.1"
                     /translation="MATKESSGKGTKKVNPALMKPLKPSGQLAAIVGADPLPRPEVVS
                     KVWEYIKKHKLQNPQNKREILADDKLEAVFGKKKVTMFEMNKHLAAHLK"
     gene            815..1774
                     /locus_tag="VHN20_19840"
     CDS             815..1774
                     /locus_tag="VHN20_19840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015931662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HEX2728079.1"
                     /translation="MCTALAAGIAGGIIGMGAQVDGIKSAYAATPATLTMPKPRLGGA
                     PAAETRGHSERSGLLSGWWHVDKVLPDVILDIVAPRAKPAQTDPEEILQFGPMRIRRH
                     LVETILKAAQATDADPVLLMAIADKESSFSTGVQARTSSATGLFQFIEKTWLKVVKDF
                     GAKHGLRKEAKAIAWVDDELVVADPAERTRILELRREPYISALLAAEMLKRDRERIAR
                     RIGRDLTHGETYLAHFLGPDDAERFMEKVVEEPGAAAAKLLPRPARANKPIFFARSGR
                     KQKSLSVAEVHRKFKAMMDLRLDRYRNVQQVADATTAETASIR"
     gene            2248..>3122
                     /locus_tag="VHN20_19845"
     CDS             2248..>3122
                     /locus_tag="VHN20_19845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018263585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3182 family protein"
                     /protein_id="HEX2728080.1"
                     /translation="MTSRGIVVTYSADEHSYADAHERATRDELARRLAGLKGYTFAGE
                     YSPRMRYDRQLYFVPGDTLTIDRAQALGIANEHDLFGGVAPHGFVVTKSITHPVVDAD
                     AVAPAGWSLAFARRVRDTVLHGFTAFTFADARRAGRLMLERGPVRLKPVRETGGHGQI
                     VASDDKELQAALATMDAGEVSSSGLVLEENLTDVVTLSVGRVRVAGLLATYYGTQRLT
                     TSNSGATVYGGSDLTIVRGDFDALLSIDLPDDVRLAIAHAGVYDHAAMECFPGVFASR
                     RNYDIAGGRDAAGQWR"
BASE COUNT          556 a         1046 c         1004 g          516 t
ORIGIN      
        1 gcgcccgccg ggcgggctgc cgcgcgaggt tatacaaccg gtttcctcgt ccgatgcctt
       61 gacgaggctg ccgttgggca acaatggtgt ggcgcctacg atgaggggcc gccgaccggt
      121 gagcccaaga cccggagaac aggaatggct accaaagaaa gttcaggaaa aggcaccaag
      181 aaggtcaatc cagctctgat gaagcccctg aagccgtccg gccagctcgc ggcgatcgtg
      241 ggcgcggacc ccctgccccg cccggaagtg gtcagcaagg tctgggaata catcaagaag
      301 cacaagttgc agaacccgca gaacaagcgt gagattctgg ctgacgacaa gctcgaggcc
      361 gtgttcggca agaaaaaggt gacgatgttc gagatgaaca agcacctcgc cgcgcacctg
      421 aaatgagcag aatttgctag cgagaagtcg gggagtgttc tctccccgct cctcccgacg
      481 gagcgcgcgg ccgtgggccc atgggccggc cgcggcaggt gtgctctccg ggacactgtc
      541 ggcggaataa tctcggttca gtgcccaccc tgccttgttt tcaacacatc tcctgcgttc
      601 ggttaactat tcgttaacca aaattcaggc cgcaagaatc agcggcgccg cggggagaca
      661 acactgcatg cgaccaaacg cgatggcgct tgccggcgcc agcggttcag tcggctgttc
      721 ctattcagtg atttcagacg agtgtctggt cctgaggccg gcgcgtgcgc cggaaggcgg
      781 gagctttgca ttcgccgccg gccgttccct tctggtgtgt accgcgctgg ccgctggcat
      841 cgccggcggc atcatcggca tgggcgccca ggttgacggc atcaagtcgg cctatgcggc
      901 caccccggcc acgctgacca tgcccaagcc ccgcctcggc ggcgcgcccg ccgcggagac
      961 tcggggccat agcgagcgca gcgggcttct gagcggctgg tggcacgtcg acaaggtctt
     1021 gcctgacgtg atcctcgaca tcgtggcccc gcgcgccaag cctgcccaga ccgatccgga
     1081 ggaaatcctt cagttcggcc cgatgcgcat ccgccggcat ctcgtcgaga cgatcctcaa
     1141 ggccgcgcag gccaccgatg ccgatcccgt cctcctgatg gcgatcgccg acaaggaatc
     1201 gagcttctcc acgggcgtgc aggcgcgcac gtcgtcggcg accggcctgt tccagttcat
     1261 cgagaagacg tggctcaagg tcgtcaagga tttcggcgcc aagcacggcc tcaggaagga
     1321 agcgaaggca atcgcgtggg tcgacgacga gctcgtcgtc gccgatcccg ccgagcggac
     1381 gcgcatcctc gagcttcggc gcgagcctta catctcggcg cttctcgcgg ccgagatgct
     1441 caagcgcgac cgcgaacgca tcgcccgccg catcggccgt gacctcacgc acggcgagac
     1501 ctacctcgcg cacttcctcg gccccgacga cgccgagcgc ttcatggaga aggttgtcga
     1561 ggagccgggc gccgcggccg cgaagctcct gcccaggccg gcccgcgcca ataagccgat
     1621 cttcttcgcc agatccggcc gcaagcagaa gagcctgtcg gtcgccgagg tccatcgcaa
     1681 gttcaaggcg atgatggacc tgcgcctcga ccgctaccgc aatgtgcaac aggtcgccga
     1741 cgccaccacg gcggagacgg ccagcatccg ctgactcgcg tctttcactt cctgaagtga
     1801 tgagtacata aaagacccgg cccgccgaag cggagccggg ttcaaggaac caagggtctc
     1861 gaaaccttgg agccttctga taacccccca attagggcag atatgtgccc aattgtcatc
     1921 aatattcgga gcgttttcga cccgttcttt gacagtcgtg aacttacttc ccggctgatc
     1981 gcgaaaacgt gtgccggccg ggcgcccgca cccgtaaggg ggtcaaggcc gcgggcccct
     2041 tgcggcgctc ggtgccgcgt cacaaagtgt ttccgcctgt catcattcgt gatcggcagg
     2101 ctgcgccgag cgcacgccgg aatcatttgc cccacgcgcg cttttggggt gcctggcagg
     2161 gtctgacggc gtggtcatcg gtctcagcgg tgttcgcgcg aggtcccggc ggacatccgc
     2221 gggcttgcga gggacacgcg acacgcaatg acatccaggg gcatcgtcgt cacgtattcg
     2281 gcggacgagc acagctacgc cgacgcgcac gagagggcga cccgcgacga gctcgcgagg
     2341 cggctggccg gcctcaaggg ctacaccttc gccggcgagt actcgccgag aatgcgttac
     2401 gaccgccagc tctattttgt gccgggcgac accttgacga tcgatcgcgc gcaggcgctc
     2461 ggcatcgcca acgagcacga cctgttcggc ggcgtcgcac ctcacggctt cgtcgtcacg
     2521 aaatctatca cccatcctgt cgttgacgcg gatgcggtgg ctccggccgg ctggtcactc
     2581 gctttcgcgc gccgcgtccg cgatacggtg ctgcacgggt tcaccgcgtt cacgtttgcg
     2641 gatgcgcgcc gcgccggcag gctcatgctc gagcgcgggc ccgtgcgtct caagccggtc
     2701 cgcgaaaccg gcggacacgg acagatcgtg gcgtcggacg acaaggaact gcaggcggcg
     2761 ctggcaacga tggatgccgg cgaggtctcc agcagcggtc tggttctcga ggagaacctc
     2821 acggacgtgg tgaccctcag cgtcggccgc gtgcgcgtgg ccggcctgct cgcgacctat
     2881 tacggcacgc aacgcctcac cacgagcaac agcggcgcca ccgtctacgg cggatccgac
     2941 ctgacgatcg tgcgcggcga cttcgatgcg ctgctctcca tcgacctccc ggacgacgtg
     3001 cggctggcca tcgcgcacgc cggtgtctac gatcacgccg ccatggaatg ctttcccggc
     3061 gtgttcgcct cgcgccgcaa ctacgacatc gccggaggtc gcgacgcggc cgggcagtgg
     3121 cg
//
LOCUS       DATAIQ010001198         2097 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_90367, whole genome shotgun sequence.
ACCESSION   DATAIQ010001198 DATAIQ010000000
VERSION     DATAIQ010001198.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2097)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2097)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2097
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_90367"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..477
                     /locus_tag="VHN20_19850"
     CDS             <1..477
                     /locus_tag="VHN20_19850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012253994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX2728081.1"
                     /translation="KGTAFRIYLPRHVPTAEEIAEEKAEPTAKPPAADLTGQGTILLV
                     EDEDPVRAVNGRALTARGYTVLEAASGVEALQIIEESATPVDLVVSDVVMPEMDGPTL
                     LRELRTRYPDLKVIFVSGYAEDAFKKNLPDGESFNFLAKPFSLKQLVETVKQTLAA"
     gene            695..1207
                     /locus_tag="VHN20_19855"
     CDS             695..1207
                     /locus_tag="VHN20_19855"
                     /inference="COORDINATES: protein motif:HMM:NF019416.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1643 domain-containing protein"
                     /protein_id="HEX2728082.1"
                     /translation="MSAIFSACGRYRYRLERAVGGSGPVVAFLLHNPSTADACADDAT
                     LRRGVGYAREWGSSRLICVNAWAGIATRPQDLWAMADPVGPDNDAHIARVVGEVVAGG
                     GFVVVGWGVIRAPPAQRPDACRRLGAVMARIRALDCELRALGRNRDGSPKHPLYVRAG
                     ARPEEWPSGS"
     gene            complement(1219..1437)
                     /locus_tag="VHN20_19860"
     CDS             complement(1219..1437)
                     /locus_tag="VHN20_19860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2728083.1"
                     /translation="MKKASEYRKHAQECRALAKRMAHGEQRDQLLAMAQTWDSLAEQR
                     VVETIGDVTPDGATRRPEPAAPQAAQRR"
     gene            complement(1626..1916)
                     /locus_tag="VHN20_19865"
     CDS             complement(1626..1916)
                     /locus_tag="VHN20_19865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2728084.1"
                     /translation="MVAPNPAPPPLTFEAPVVVWADRLNHGAGQHFITTVPDGLQALH
                     RHGMERLRTDPLWKAAAAALARAQLTPTPAALDGARSALQAVAKEAGCLAEK"
BASE COUNT          320 a          685 c          737 g          355 t
ORIGIN      
        1 aaagggaccg ccttccgcat ctacctgccg cggcacgtgc ccaccgcaga agagatcgcc
       61 gaggagaagg cggagccgac cgccaagccg cccgcggccg atctcaccgg ccagggcacc
      121 atcctgctcg tcgaggatga ggatccggtg cgcgccgtga atggccgcgc cttgaccgcg
      181 cgcggctata ccgtgctcga agccgcttcc ggcgtcgagg cgctgcagat catcgaggaa
      241 agcgcaaccc cggtcgacct cgtcgtgtcc gacgtcgtga tgccggagat ggatgggccg
      301 accctgctgc gcgagctgcg cacgcgctac ccggacctca aggtgatctt cgtgtccggc
      361 tacgccgagg acgcgttcaa gaagaacctg ccggacggcg agagcttcaa tttcctggca
      421 aagccattca gcctcaagca gctggtcgag accgtcaaac agacgctggc cgcctagccg
      481 ctgccgctca ccctgggggg cgggcttttc gccgaccgag gaaaagctcg cgagccccga
      541 aggacgctcc ggttcgcccc cctggtaggc ttcgaggctc gtcgttgccg ctcctcgcat
      601 ccagcgtgag gagcggacta taggtccgac ctgaagttgc tcgcaggatc aaccgagctc
      661 gctagtatgg catgctcatg cggatgaggt cggcgtgagc gcaatcttct cggcctgcgg
      721 ccgctaccgc taccggctcg agcgcgccgt cggcggctcg ggcccggtcg tcgcattcct
      781 gctgcacaac ccgagcacgg cggacgcctg cgccgacgac gcgaccttgc gccgcggcgt
      841 cggctacgcg agagaatggg gcagctcgcg cctgatctgc gtcaatgcct gggccggaat
      901 tgcgacgcgt ccgcaggacc tgtgggcaat ggccgatccg gttgggccgg acaacgacgc
      961 gcatattgcg cgggtcgtcg gggaggtcgt ggcgggcggc ggcttcgtcg tcgtgggctg
     1021 gggcgtgatc cgggcgccgc cggcgcagcg gccagacgcg tgtcgtcgtc tcggcgccgt
     1081 gatggcgcgc attcgcgctc tcgactgcga gctgcgggcg ctcggccgaa accgcgacgg
     1141 ctcgccgaag catccgctct acgtgcgggc aggggcgcgt ccggaggagt ggccctcggg
     1201 atcgtgaggg gcagggcgtc agcgccgctg cgctgcctgc ggtgcggccg gctcaggcct
     1261 cctcgtcgcg ccgtcaggcg tcacgtctcc gatcgtttcg acgacccgct gctccgcgag
     1321 gctgtcccag gtctgcgcca tcgccagaag ctggtcgcgc tgttcgccgt gcgccatgcg
     1381 cttggcgagc gcgcgacact cctgcgcatg tttacgatat tccgacgcct ttttcacgaa
     1441 cgcccccgct tgttgcttct tactcgcgag ccgtgtgttt ccaggccttt gactgattcg
     1501 cgcgtgttgt cacgctttat gagaccgttc gaagcttggc cgcgcctggg gttgcggcaa
     1561 cgcggaacag ccggtcaggc acacaggtct ggcgagaagg ggaggggcag cggctggccg
     1621 tcggcctatt tttctgccag gcagccggct tccttggcca cggcttgcag cgccgacctt
     1681 gcgccgtcga gggcagcagg ggttggggtc agctgcgcac gcgccagagc cgcggcggcg
     1741 gctttccaaa ggggatcggt ccgcagccgc tccatgccgt gacggtgcag ggcctggagg
     1801 ccatccggca ccgtggtgat gaaatgctga cccgcgccgt ggttgaggcg atcggcccaa
     1861 accacaacgg gagcctcgaa agtcaacggc ggaggggcgg gattgggagc aaccatttat
     1921 gagcacgggc aaaggaagtg ggtaatgcgc gttgtgataa cgcgcctgac ggataggccg
     1981 ttgcgctcgg cgcggcaagc ggtctgtgcc gcgtaggggg aaacccaggg ctttgtcctt
     2041 cgcacatcgt tgtttcgcga cgagagactc gcggcgatca tccggcacgt gtccaac
//
LOCUS       DATAIQ010001199         2710 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_90468, whole genome shotgun sequence.
ACCESSION   DATAIQ010001199 DATAIQ010000000
VERSION     DATAIQ010001199.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2710)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2710)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2710
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_90468"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            174..1172
                     /locus_tag="VHN20_19870"
     CDS             174..1172
                     /locus_tag="VHN20_19870"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX2728085.1"
                     /translation="MGRTPYAALIAAAAALLLAHGVSAPAQQPKHVYRIGMLRVDTAA
                     DPRAQGLTDVFRQGLRELGYVEGKDVVIDYRHAGGQLDRLPKLAADLVATRPDVIVAQ
                     GTPGTLALKQATSSIPIVVGGAGDLVGAGLVASLARPGGNITGSTNIDPDLSAKRLAL
                     LKEALPRVSRVAVLYHGSPGGDAEELRENETAARALGLELLPLRVEADHQFEDAFAAI
                     ARERSEAVVILHGSFTLTHRRQLIELAAKSRLPVMSGEASWPEAGALISYGYDRRHQW
                     RRAAHFVHKILHGARPADLPVEQPLKFELTVNLQTAAALGLNLPRTLLARADVVIR"
     gene            1211..>2710
                     /locus_tag="VHN20_19875"
     CDS             1211..>2710
                     /locus_tag="VHN20_19875"
                     /inference="COORDINATES: protein motif:HMM:NF012722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HEX2728086.1"
                     /translation="MPAQTRAGLFRKYLTRMAAVVCAAVIGVGAFGIWTVYRTHKASL
                     IGLQRAQAELAATKIGQFVREIEGQLGWTTQLSWSGALTLEERHLDAVRLLRLVPAIT
                     ELALIDHRGHEQVRLSRTAMDVVGSDEDRSSEPAVFNAQTRNAHYGPVYFRRGSEPHF
                     TLALAGGRADAGVSVAEVNLVHIWDVISQIKVGERGLAYVVDAAGRLIAHPDIGLVLR
                     NTDLSGLAQVQAARAASGRDDDAAVTNLDGQPVLAAHAPIAPVGWTAFVEVPFDEAVA
                     PVYASLLPAGVILILALLLAVLTSLVLARRMVKPIRALQTSAARIGAGALDERIDIST
                     GDELEALGRQFNGMAARLQESYATLERRIAERTHELALANLAKTRFLAVASHDLRQPL
                     HALNLFVAQLRGESEEQERGRLVARIESAVAAMNELFEALLDISRLDAGVTAPNLADF
                     PVAHLLKRVETTFAAAARAKGIRLRVVPSRASVRSDFVLLERILLNLVSN"
BASE COUNT          417 a          961 c          912 g          420 t
ORIGIN      
        1 ggagccctgc gacagccagc gcgtgatcct ccagcacgtg gcttgcagcc aggcgccagc
       61 cctcctcatg ccgaggtgcg tgcgggacgc attttcttcg gcgaagcggt ggccactacg
      121 cccggaaatg ctttaggctc gggcttccac acctcagggg tgtaggagaa gccatgggcc
      181 ggacgccgta tgccgccctg atcgctgccg ccgcggcgct gctgctcgcg catggcgtca
      241 gcgcgcccgc ccaacagccg aagcacgtct atcggatcgg gatgctgcgg gtcgacactg
      301 ccgccgaccc gcgcgcgcaa gggctgacgg acgttttccg gcaaggcctg cgcgagctcg
      361 gctacgtcga gggaaaagac gtcgtcatcg actaccgtca cgccggcggg cagctcgacc
      421 gcctgccgaa gcttgccgcg gatctcgtcg ccacgcggcc cgacgtcatc gtcgctcaag
      481 gcacgccggg aacgctggcg ctcaaacagg cgaccagctc cattccgatc gtcgtcggcg
      541 gcgccggcga tctcgtcggc gcgggactgg tcgcgagcct cgcgcggccg gggggaaaca
      601 tcaccggatc gaccaacatc gacccggatc tcagcgccaa gcggctcgcc cttctcaagg
      661 aggcccttcc ccgggtgtcg cgcgtggcgg tgctctatca tggcagcccg ggaggagatg
      721 cggaggagct gcgcgagaac gagacggcag ccagggcgtt gggactggag ctgctgccgt
      781 tgcgcgtcga ggccgaccac cagttcgagg atgcctttgc ggccatcgca cgcgaacgtt
      841 ccgaggcggt cgtcatcctg cacggcagct tcaccctgac ccaccgaagg cagctgatcg
      901 agcttgcggc caaatcccgg cttccggtga tgtctggcga ggcaagctgg cccgaagccg
      961 gcgccctcat ctcctatggc tacgaccgtc gccatcagtg gcggcgcgcc gcgcatttcg
     1021 tgcacaagat cctgcacggc gccaggcccg ccgacctgcc cgtcgagcag cccttgaagt
     1081 tcgagctgac cgtcaatctc cagactgcgg cggcgctggg tctcaatctg ccgcgcacgc
     1141 tgctggcgcg cgccgacgtc gtgatcaggt gaacgcagcc ggcggagatc ttcctgaagc
     1201 cggcacgcag atgcccgcac aaacgcgcgc cgggctgttc cgcaaatacc tcacgcgcat
     1261 ggccgcggtc gtctgcgcgg ccgtgatcgg cgttggtgcg ttcggcatct ggacggtcta
     1321 ccgcacccac aaggcatccc tgatcgggct gcagcgcgca caggccgagc tcgccgccac
     1381 gaagatcggg cagttcgtgc gcgagatcga ggggcagctc ggctggacga cgcagctgtc
     1441 ctggtcgggc gcgcttacgc tcgaggagcg acacctcgat gccgtgcgtc tcctgcggct
     1501 agtgccggcc atcaccgagc ttgccctgat cgatcatcgg ggccacgagc aggtgcggct
     1561 ctcgcgcacg gccatggacg tggtcggaag cgacgaagac cgctcgagcg agcccgcggt
     1621 tttcaacgca caaacgcgca acgcgcatta cgggccggtc tatttccggc gcggctcgga
     1681 gccgcatttc acgctggcgc ttgccggcgg ccgcgccgac gccggcgtca gcgtcgccga
     1741 ggtcaacctc gtccacatct gggacgtgat ctcgcagatc aaggtgggcg agcgcgggct
     1801 cgcctacgtg gtcgatgcgg caggccggct gatcgcgcat ccggacatag gcctcgtgct
     1861 gcgcaacacc gacctgtccg ggctcgccca ggtgcaggcc gcgcgcgcgg cttcgggccg
     1921 cgacgacgat gcggcggtca cgaatctcga cgggcagccg gtgctcgcgg cgcacgcgcc
     1981 gattgcgccg gtcggatgga ccgccttcgt cgaggttcca ttcgacgagg cggtcgcccc
     2041 cgtctacgcc tcgctgctcc ccgccggcgt gatcctgatc ctggcgctcc tgctcgcggt
     2101 cctcacgagc ctcgtccttg cccgccgcat ggtgaagccg atccgcgcgc tgcagacaag
     2161 cgccgcacgc ataggcgccg gcgcgctcga cgagcgcatc gacatctcga ccggcgatga
     2221 gctggaagct ttggggcggc agttcaacgg catggccgcg cggcttcagg agtcgtacgc
     2281 gaccctcgag cgcaggatcg cggagcgcac gcacgagctc gcgctcgcca acctcgccaa
     2341 gacccgcttt ctcgccgtgg cgagccacga tctgcgccag ccgcttcacg ccttgaacct
     2401 gttcgtcgcg cagctgcgcg gcgagagcga agaacaggag cgaggccggc tggtcgcgcg
     2461 catcgaatcc gccgtcgcgg ccatgaacga gctgttcgag gcgctcctcg acatctcgag
     2521 gctcgacgcc ggcgtgacgg cgcccaacct ggccgacttc cccgtcgcgc acctgttgaa
     2581 gcgcgtcgaa accaccttcg ccgccgccgc gcgcgcgaaa gggatcaggt tgcgcgtcgt
     2641 gccgagccgt gcgtcggtgc gcagcgattt cgtcctgctc gaacggatcc tgctcaacct
     2701 ggtgtccaac
//
LOCUS       DATAIQ010001200         1530 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_90619, whole genome shotgun sequence.
ACCESSION   DATAIQ010001200 DATAIQ010000000
VERSION     DATAIQ010001200.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1530)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1530)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1530
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_90619"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..438
                     /locus_tag="VHN20_19880"
     CDS             <1..438
                     /locus_tag="VHN20_19880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011089417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2728087.1"
                     /translation="EQPKMMKLADVFYTAATNGGTLALQQAAPTRDKADKLVDQRLAA
                     PFNADANDYIYAWESSAAYDPTPGLDKITAPLLLINAADDERNPPETGVTERELKRVK
                     NGRLLLLPASEETRGHGTTGMAKFWKQELQAFLETVPRRTAAR"
     gene            694..>1530
                     /locus_tag="VHN20_19885"
     CDS             694..>1530
                     /locus_tag="VHN20_19885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LUD domain-containing protein"
                     /protein_id="HEX2728088.1"
                     /translation="MTVHATSPHFKDNAREALADPQLQRALGHVKRGFIGRRQAAVDK
                     LPEFDALRDSAREIKNHTLAHLDLYLERYEDKVRSSGGHVHFARTAEEARNIILTICR
                     TAGAQTVTKGKSMIAEEIGLNAHLEAAGITPVETDLGEYIIQLRGEIPSHIIAPAVHV
                     NATQVEQDFRRVHAHLDPGRDLSELVQLLGEARTVLREQFLTADVGITGANFLVAETG
                     TSIIVTNEGNGDLSQILPKTHVVLASIEKLVPTLEDVSQLLRVLARSATGQDMSVYTT
                     LST"
BASE COUNT          282 a          554 c          487 g          207 t
ORIGIN      
        1 gagcagccga agatgatgaa gctggccgac gtgttctaca ccgccgccac caacggcggc
       61 acgctcgccc tgcagcaggc ggcgccgacg cgcgacaagg ccgacaagct ggtcgaccag
      121 cgcctggcgg cgccgttcaa cgcggatgcc aacgactaca tctacgcctg ggaatcatcg
      181 gccgcctacg acccgacgcc gggcctcgac aagatcacgg cgccgctgct cctgatcaac
      241 gccgccgacg acgagcgcaa tccgccagag accggcgtca cggagcgcga gctcaagcgc
      301 gtcaagaacg gccgcctctt gctgctcccg gccagcgaag agacgcgcgg ccacggtacc
      361 accggcatgg cgaagttctg gaagcaggag ctgcaggcct tcctggagac ggtgccgcgg
      421 cgcaccgccg cgcggtaaca ctaccctccc ccttgcgggg agggtcgagt cgggcgcgaa
      481 agcgcccgac cggagtgggg gtcatgggat ctgagcccca cgtttcgact cccgcaacgc
      541 ccaaatcagc gtacatgctt ttgacagtaa gcgcgctgcg ccgacgaccc ccacccggct
      601 cggccttcgg ccgagtccgc cctccccgca agggggaggg atcgcgccta agcggtctcg
      661 cacatgcgcg cattccgggt tacacggact cgcatgaccg ttcacgccac gtcgccgcat
      721 ttcaaggaca acgcccgcga ggcgctcgcc gacccgcagc tccagcgggc gctcgggcac
      781 gtcaagcgcg gcttcatcgg ccgccgccag gccgcagtcg acaagctgcc ggaattcgac
      841 gcgctgcgtg actcggcgcg cgagatcaag aaccacacgc tcgcgcatct cgacctctat
      901 ctcgagcgct acgaggacaa ggtgcgcagt tcaggcggcc acgtgcattt cgcgcgcacc
      961 gccgaggagg cgcgcaacat catcctgacc atctgccgca cggccggggc gcagacggtg
     1021 accaagggca agtcgatgat cgccgaggag atcggcctca acgcccatct cgaggccgcc
     1081 ggcatcacgc cggtcgagac cgatctcggc gaatacatca tccagctgcg gggcgagatc
     1141 ccgagccaca tcatcgcacc ggcggtgcac gtcaacgcga cccaggtcga gcaggatttc
     1201 cggcgcgtgc acgcgcatct cgaccccggg cgcgacctgt cggagctggt gcagctgctg
     1261 ggcgaggcgc gcaccgtgct ccgcgagcag ttcctaaccg ctgacgtcgg tatcaccggc
     1321 gccaacttcc tggtggccga gaccggcacc tcgatcatcg tcaccaatga gggcaacggc
     1381 gacctgtcgc agatcctgcc gaagacccat gtcgtgctgg cctcgatcga gaagctcgtg
     1441 ccgacgctgg aggacgtgag ccagctcctg cgcgtgctcg cccgctcggc gaccggacag
     1501 gacatgtcgg tctacacgac cttgtcgacc
//
LOCUS       DATAIQ010001201         3332 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_91073, whole genome shotgun sequence.
ACCESSION   DATAIQ010001201 DATAIQ010000000
VERSION     DATAIQ010001201.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 3332)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3332)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3332
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_91073"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..798
                     /locus_tag="VHN20_19890"
     CDS             <1..798
                     /locus_tag="VHN20_19890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003605674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KpsF/GutQ family sugar-phosphate isomerase"
                     /protein_id="HEX2728089.1"
                     /translation="GHVARKLAATLASTGTPAFFVHPSEASHGDLGMIQPEDVIVALS
                     WSGETAELADLVAYAKRFRVGLIAITSNESSQLGRAADACLTLPQAFEACPNGLAPTT
                     STTMQLAIGDALAIALLERRGFTAEHFRVFHPGGRLGAKLKHVGDVMHVGERLPTVAV
                     GARMDAAILEISAKGFGCVIVVDDDGALAGIITDGDLRRHMSPDLATLPVNAVMTKKP
                     RTIAPDALLAEALAIQEDSKITALVVAEDDRPVGLVHYLDLLRAGVT"
     gene            complement(931..1380)
                     /locus_tag="VHN20_19895"
     CDS             complement(931..1380)
                     /locus_tag="VHN20_19895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008967484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NfeD family protein"
                     /protein_id="HEX2728090.1"
                     /translation="MIEYVLDNLGPWSWIILGLVLMGLELLAPGVFLMWLGLAAVLTG
                     LVDWAFGLSWQAATLLFAVLSVVTMLVGRAVSRHPDEEETGRPSLNRRGHGLVGRVFM
                     LDAPIAGGEGRIRVDDSVWRIIGPDVPAGASVRVVRVDGATLVVESA"
     gene            complement(1380..1640)
                     /locus_tag="VHN20_19900"
     CDS             complement(1380..1640)
                     /locus_tag="VHN20_19900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2728091.1"
                     /translation="MIAYVVDNLGPWNWIILGLVLMGLELVRPGYLFFWLGSSAVLTG
                     LLGWLFGSPWQAQVLMFVLLAVVDVVLWRMTRRRKLARCGAE"
     gene            complement(1645..2631)
                     /locus_tag="VHN20_19905"
     CDS             complement(1645..2631)
                     /locus_tag="VHN20_19905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019906301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH domain-containing protein"
                     /protein_id="HEX2728092.1"
                     /translation="MSGSLGFDVFVVAFVILIVITIALGVRTVPQGWAYTVERFGRYS
                     RTLTPGLGLITPYIEGIGHKINMMEQVLDIPSQEAITRDNANVRIDAVSFFQVLDPAR
                     AAYEVSNLQLALLTLTMTNIRTVVGSMDLDQLLSHRDEINEKLLRVMDAAASPWGVKV
                     TRVEIKDILPPADLAEAMARQMKAEREKRAAVLEAEGLRQAEILRAEGQKQAQILSAE
                     GRKEAAFRDAEGRERLAEAEAKATTMVSDAIGRGDLAAANFLVAEKYVEALRAVATAP
                     NQKVLIVPLETASLAGTLGGIAEITRSVFGDGATAAQPRRSPSLPPPSSTQS"
     gene            complement(2700..>3332)
                     /gene="hemH"
                     /locus_tag="VHN20_19910"
     CDS             complement(2700..>3332)
                     /gene="hemH"
                     /locus_tag="VHN20_19910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012253087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004325 - ferrochelatase activity
                     [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HEX2728093.1"
                     /translation="VPLYPQYSAATSATACDHAFRALMDMRWQPTIRVSAPYHDDPVY
                     IDAVVSSMKGNLAKLDFEPEVILVSFHGVPKSYLLKGDPYHCHCVKTWRLLRARMGWP
                     EERFRISFQSRFGPDEWLQPYTDETVKKLAENGVRRMAIVAPGFSADCLETLEELNVE
                     NRHIFEQHGGEQFAYLPCLNDSADGMRVISHVVERELQGWIRTCGPGEAP"
BASE COUNT          553 a         1160 c         1105 g          514 t
ORIGIN      
        1 ggccacgtgg cccgcaagct cgccgccacc ctcgcctcca caggcacgcc ggcctttttc
       61 gtgcatccga gcgaggcgag ccacggcgac ctcggcatga tccagcccga ggacgtgatc
      121 gtggccctgt cctggtccgg agagaccgcg gagcttgccg atctcgtcgc ctacgccaaa
      181 cgcttccggg tcggcctcat cgccatcacg tcgaacgaat cgagccagct cggccgggcg
      241 gcagacgcct gcctgacgct gccgcaggcg ttcgaggcgt gtcccaacgg cctcgcgccc
      301 accacctcga ccaccatgca gctcgccatt ggcgacgcac tcgccatcgc gctgctcgag
      361 cggcgcggct tcaccgcgga gcatttccgc gtctttcatc ccggcggccg cctcggggcg
      421 aagctcaagc acgttggcga cgtcatgcat gtcggcgaac gcctgccgac ggtcgccgtc
      481 ggcgcgcgca tggacgcggc catcctcgag atcagcgcca agggcttcgg ctgcgtgatc
      541 gtcgtcgacg acgacggcgc cctggccggc atcatcaccg acggcgattt gcgtcggcac
      601 atgagccccg acctcgcgac gctgccggtc aacgcggtga tgacgaagaa gccgcgcacg
      661 atcgcgcccg acgccctttt ggccgaggct ctcgccatcc aggaggattc gaagatcacc
      721 gccctggtgg tcgccgagga cgatcgcccg gtcgggctcg tgcactacct cgacctgctc
      781 cgcgccggcg tcacgtaagc cctgtcattc cggggcacgc cgaaggcgtg agcccggaac
      841 ctacgaccgg gtgagccttc acaatcgcac tgtcgcacca ggtcgtgggt tctgggttcc
      901 tcgcttcgct tggccccgga atgacgagtg ttaggcgctt tccaccacga gcgtcgcgcc
      961 gtcgacgcgg acgacgcgca cgctggcgcc ggccggcacg tcgggcccga tgatgcgcca
     1021 cacgctgtcg tcgaccctga tgcggccctc gccgccggcg atcggcgcgt cgagcatgaa
     1081 gacgcggccg acgaggccgt ggccgcggcg attgagcgac gggcggccgg tctcctcctc
     1141 gtccggatgg cgcgacacgg cgcgcccgac gagcatggtc acgaccgaaa ggacggcgaa
     1201 gagcagcgtc gcggcctgcc acgacaggcc gaacgcccag tcgaccaggc ccgtcagcac
     1261 cgccgcgagg ccgagccaca tcaggaacac gccgggcgca agcagctcga ggcccatcag
     1321 cacgagccca aggatgatcc agctccacgg cccgaggttg tcgagaacgt attcgatcat
     1381 cactcagccc cgcaccttgc gagcttgcgg cgccgtgtca tccgccacaa cacaacgtcg
     1441 accaccgcca gaagcacgaa catgagcacc tgcgcttgcc agggagaacc gaacagccag
     1501 ccgagaaggc cggtcagaac ggcggacgag ccgagccaga aaaacagata gcccggacga
     1561 acgagctcga ggcccatcag gaccagccca aggatgatcc agttccacgg cccgaggttg
     1621 tcgacgacgt aggcgatcat gggctcagct ctgcgtgctc gacggcggcg gcaggctcgg
     1681 cgagcgccgg ggctgcgccg cagtggcgcc atcgccgaac acggaccgcg tgatctcggc
     1741 gatgccgccg agggtgccgg ccagcgacgc ggtttcgagg ggcacgatca ggaccttctg
     1801 gttgggcgcc gtcgcgacgg cgcgcagcgc ctcgacgtat ttctcggcga cgaggaagtt
     1861 ggcggccgcg agatcacccc gcccgatcgc gtcgctgacc atggtggtcg ccttggcctc
     1921 cgcttcggcc aggcgctcgc gcccttccgc gtcgcggaac gccgcttcct tgcgaccttc
     1981 ggcggagagg atctgcgcct gcttctgccc ttcggcgcgc aggatctcgg cctggcgcag
     2041 accttccgct tcgagcacgg cagcgcgctt ctcgcgttcc gccttcatct gccgggccat
     2101 cgcctcggcg agatcggccg gcggcaggat gtccttgatc tcgacgcgcg tgaccttgac
     2161 gccccagggc gaggcggccg catccatgac gcgcagcagc ttctcgttga tctcgtcgcg
     2221 gtgcgagagc agctggtcga ggtccatcga gcccacgacc gtgcggatgt tggtcatggt
     2281 cagcgtgagc agcgccagct gcaggttgga gacttcgtag gccgcccgcg ccgggtccag
     2341 cacctgaaag aacgagaccg cgtcgatgcg cacattggcg ttgtcgcgcg tgatcgcctc
     2401 ctggctcgga atgtccagaa cctgctccat catgttgatc ttgtggccga tgccctcgat
     2461 gtagggcgtg atcagcccga gcccgggcgt gagcgtgcgc gaatagcgcc cgaagcgctc
     2521 caccgtatag gcccagcctt gcgggacggt gcgcaccccg agcgcgatcg tgatgacgat
     2581 caggatcacg aacgcgacga cgaagacgtc gaaaccgagc gaacccgaca ttgtgccccc
     2641 ctgcactggc cgcccccgcg gcctcgccct tccttaaacg agacgggacg attcggttat
     2701 cacggcgcct cgcctggccc gcaagtccgg atccaaccct gcagctcgcg ctccacaacg
     2761 tggctgatga cgcgcattcc gtcagcgctg tcgttcaggc acggcagata ggcgaactgc
     2821 tcgccgccat gctgctcgaa gatgtggcgg ttctcgacgt tgagttcctc gagcgtctcg
     2881 aggcagtcgg ccgagaagcc cggcgccacg atcgccatgc gcctgacgcc attttcggca
     2941 agtttcttga cggtctcgtc ggtgtacggc tgcagccatt cgtcgggccc gaagcgcgac
     3001 tgaaagctga tgcggaagcg ctcctccggc cagcccatgc gcgcccggag caggcgccag
     3061 gtcttgacgc agtggcagtg atagggatcg cccttgagga ggtacgattt cggcacgccg
     3121 tggaacgaga ccaggatgac ctcgggctcg aagtcgagct tggcgaggtt gcccttcatc
     3181 gaggagacga ccgcgtcgat gtagaccggg tcgtcgtgat agggcgccga gacgcggatc
     3241 gtcggctgcc agcgcatgtc catcagcgcc cggaaggcgt ggtcgcacgc ggtggcggag
     3301 gtggcggcgg aatattgcgg gtagagcggc ac
//
LOCUS       DATAIQ010001202         1619 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_91148, whole genome shotgun sequence.
ACCESSION   DATAIQ010001202 DATAIQ010000000
VERSION     DATAIQ010001202.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1619)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1619)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1619
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_91148"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            129..>1619
                     /locus_tag="VHN20_19915"
     CDS             129..>1619
                     /locus_tag="VHN20_19915"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003599287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HEX2728094.1"
                     /translation="MFDKILIANRGEIACRVIRTARRMGIRTVAVFSEADRDALHVEM
                     ADEAVPIGPAPAAQSYLVIDNIMAACRRTGAQAVHPGYGFLSEREAFPQALASAGIVF
                     IGPNARAIAAMGDKIESKKAAAAANVSTVPGFLGVIEDEAHARRIAAEIGFPVMIKAS
                     AGGGGKGMRIAHSPAEVGEGFARARSEAASSFGDDRVFIEKFITDPRHVEIQVLGDKH
                     GNVIHLGERECSIQRRNQKVIEEAPSPLLDAATRHAMGQQAVALAKAVGYDSAGTVEF
                     VAGQDRSFYFLEMNTRLQVEHAVTEMVTGIDLVEEMIRVAAGERLRHRQDDIRLNGWS
                     VESRIYAEDPARNFLPSTGRLATYRPPEEGASGEAAIRNDTGVTEGGEISIYYDPMIA
                     KLVTHAPTREAAIAAQGRALDAFAIDGIRHNIPFLAAVMQHPRWREGRLSTAFIAEEF
                     PDGFRPPQPRGEIGRRLAAVAAAIDHRLNERKRAISGQMRAPAELRF"
BASE COUNT          257 a          578 c          550 g          234 t
ORIGIN      
        1 ccaggtccct ggcctcctga accggcgcga aagcggctgc ccacgggagg gtggacgccg
       61 ggcctcgtgc gtcgatagaa gcggcgggct tcccacccgc cgtttcctcc gccacggtgc
      121 ccgcgcccat gttcgacaag atcctgatcg ccaaccgcgg cgagatcgcc tgccgggtca
      181 tccggacggc gcgccgcatg ggcatcagga ccgtggccgt gttctccgag gccgaccgcg
      241 acgcgctgca cgtggagatg gccgacgagg cggtgccgat cggcccggcg ccggcggcgc
      301 aatcctatct ggtcatcgac aacatcatgg ccgcgtgccg ccggaccggc gcccaggccg
      361 tgcatccggg ctatggcttc ctgtcggaac gcgaggcgtt cccgcaggcg ctcgcctccg
      421 ccggcatcgt gttcatcggc ccgaacgccc gcgccatcgc ggcgatgggc gacaagatcg
      481 aatcgaagaa ggcggcggcc gccgccaacg tctcgaccgt gccgggcttt ctcggcgtga
      541 tcgaggacga ggcgcatgcc aggcgcatcg ccgccgagat cggcttcccg gtcatgatca
      601 aggcgtcggc cgggggcggt ggcaagggca tgcgcatcgc ccactcacca gccgaagttg
      661 gcgagggttt cgcgcgtgcc aggtccgaag cggcatcatc gttcggcgac gatcgcgtct
      721 tcatcgaaaa gttcatcacc gacccgcgcc acgtcgagat ccaggtgctc ggcgacaagc
      781 acggcaacgt gattcatttg ggcgagcgcg aatgctcgat ccagcgtcgc aatcagaagg
      841 tcatcgagga ggcgccctcg ccgctgctcg acgcggcgac acggcacgcc atgggccagc
      901 aggcggtcgc gctcgccaag gccgtcggct atgattccgc cggcacggtc gagttcgtcg
      961 ccggccagga ccgctcgttc tacttcctcg agatgaacac gcgcctgcag gtcgagcacg
     1021 cggtcaccga gatggtcact ggcatcgacc tggtcgagga gatgatccgc gtcgccgccg
     1081 gcgagcgcct gcgccatcgc caggacgaca tccggctaaa cggctggtcg gtcgagagcc
     1141 gcatctatgc ggaggatccg gcgcgcaatt tcctgccgtc gacgggccgt ctcgcgacct
     1201 accgcccgcc cgaggaaggc gcatcgggtg aggccgccat ccgcaacgac acgggcgtga
     1261 ccgaaggcgg cgagatctcg atctattacg atccgatgat cgccaagctc gtgacgcacg
     1321 cgccgacgcg cgaggccgcg atcgcggcac agggccgggc gctcgacgcc ttcgcgatcg
     1381 acggcatccg ccacaacatc ccgttcctcg ccgccgtgat gcagcacccg cgctggcgcg
     1441 agggccggct atcgaccgct ttcattgccg aggagttccc ggacggcttc aggccgccgc
     1501 agccgcgcgg tgagatcggc cggcgcctcg ccgcggtggc cgcggcgatc gaccatcgtc
     1561 tcaacgagcg caagcgcgcc atctccgggc agatgcgcgc gcccgccgag ctgcgcttc
//
LOCUS       DATAIQ010001203         2614 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_91318, whole genome shotgun sequence.
ACCESSION   DATAIQ010001203 DATAIQ010000000
VERSION     DATAIQ010001203.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 2614)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2614)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2614
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_91318"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(156..1778)
                     /locus_tag="VHN20_19920"
     CDS             complement(156..1778)
                     /locus_tag="VHN20_19920"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014079.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HEX2728095.1"
                     /translation="MNEMRGTGMLGRECDFDKFRLRRFVETLVSLGEVEIHDEPVPLT
                     GMSAIIERSGPKAVLFKQAGPERVEVAAKVGASRSRLIAAFGSTPQTIYDDYLGRFAN
                     PKKSFVVPSDEAPVHAVKITGNEVDLTKLPFHPQHEFDGSCYISSGIDYVIDPATGRS
                     NVGSRRLSLRNRHEAGTNITAPSDLKRIFEACAKRRERLPISFTIGSHPLDFIAATSR
                     QQGDEHHMLSTVRGEPTPLVKCLTNDILVPADAEVVLEGYLDERGYYEPEGPYGEYMG
                     YYGAIHMDPVFRCTAVTMRKDPLYLTLQHGSAFVLDQTDSTCMTALNIEATAMRILKN
                     VCREPIAVSSRPLSGGSGTLRISLKQHRPGEARNAMLAIFGAILRIKQVYAFDEDIDV
                     TDDRQVEWAMGTRFQGDQDIVMVTGMMGMPMDPSLDGRRTGAKIGFDCTRPFGKGDQI
                     VHTRCAAKVFDGTARFKTVEQALASGPMFYTHLVEAVGSSDGREIAVALDELRQRGKL
                     GRDRDGRYHLSQASPGLTGSVGAFYHDPNQGT"
     gene            complement(1817..2554)
                     /locus_tag="VHN20_19925"
     CDS             complement(1817..2554)
                     /locus_tag="VHN20_19925"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HEX2728096.1"
                     /translation="MSNAILDRMEGDILHITLNEPDSGNAMSNDMAGRLAALLEEAAE
                     RARVVVLRAAGNDFCVGRASMGKPRDTRPEALALRSTNDVVFRCYGAFRRSPVPIIAV
                     VQGKALGFGCALAAAADITIAADDASFQLPEFGHNIMPTMARSALLGRVSEKALMYRA
                     YSTATLDAPRALQVGIVSEVAPAAGLDQALERLCATLLKAPPPAVLAIKEFARTASAM
                     NIEHAIQYARSLHATVNSSSEMRREKQ"
BASE COUNT          448 a          840 c          846 g          480 t
ORIGIN      
        1 gggcgcgccc gacgaccacc gcaagcgcat cgtctgccct accgacagaa caatctcaga
       61 atatgccgac atggtgcgcg gatatctcag ctttttcgag cagctgcggg caggggaggg
      121 gcggggcggc accgacgaga cacagcaggt ttccgtcaag tcccctgatt gggatcatga
      181 tagaaggcgc cgaccgaccc cgtgaggccc gggctcgctt ggctcaggtg ataccgtccg
      241 tcgcgatcgc gcccgagctt gccgcgctgt cgcagctcgt ccagggccac cgcgatctcg
      301 cggccgtcgg aactgcccac cgcctcgacg agatgcgtgt agaacatggg cccggaagcc
      361 agcgcctgct cgactgtctt gaaacgcgcg gtcccgtcaa agactttcgc cgcgcaacgc
      421 gtgtggacga tctgatcgcc cttgccgaac ggccgcgtgc agtcgaagcc gatcttggct
      481 cccgtcctgc ggccatcgag agagggatcc atcggcatgc ccatcatgcc ggtgaccatg
      541 acaatgtcct gatcaccctg aaagcgggtg cccatggccc attcgacctg ccggtcgtcg
      601 gtcacgtcga tgtcctcgtc gaacgcataa acctgcttga tgcgcaggat tgctccgaag
      661 atggcgagca tggcattgcg cgcctcgccg ggcctgtgct gcttcagcga aatgcgcagg
      721 gtgccggacc cgcctgacag cgggcgcgag ctgacagcga tcggttcgcg acagacgttc
      781 ttgaggatcc gcatcgcggt cgcttcgatg ttcagcgccg tcatgcaggt cgagtcggtc
      841 tggtcgagca cgaacgcgct gccatgctgc aacgtcaggt aaagtggatc cttgcgcatg
      901 gtgaccgccg tgcaccgaaa caccggatcc atgtggatgg caccgtaata gcccatgtat
      961 tcgccgtacg gaccttccgg ctcgtagtag ccgcgttcgt cgagatagcc ttcgagcacg
     1021 acctcggcgt cggccggaac gaggatgtcg ttcgtcaggc atttgaccag cggcgtcggc
     1081 tcaccccgaa cggtcgacaa catgtgatgc tcgtcgccct gctggcggct cgtcgcggcg
     1141 atgaaatcga gcgggtgcga gccgatcgtg aaggagatcg gcaggcgttc gcggcgcttc
     1201 gcgcaagctt cgaaaatccg cttcaggtcc gacggcgccg tgatgttggt cccggcctca
     1261 tgacggttgc gcagggacaa gcggcggctg cccacgttcg aacggcccgt tgcggggtcg
     1321 atgacgtagt cgatcccgga gctgatgtag cagctgccgt cgaattcatg ttgcggatga
     1381 aatggtagct tcgtgagatc gacctcgttg cccgttatct tgacggcatg cacgggcgct
     1441 tcgtcggacg ggaccacgaa cgactttttc ggattggcga agcggccaag gtaatcatcg
     1501 tagatcgtct gcggcgtgga tccgaaagcc gcgatgagac ggctccggct cgccccgacc
     1561 ttcgcggcga cttcgacgcg ctccggcccg gcctgcttga acagcactgc cttcgggccg
     1621 cttcgctcga tgatcgcgct catcccggtg agcggcacgg gctcgtcgtg aatctcgacc
     1681 tcgcccaggg aaacgagcgt ctcgacgaac cggcgcagcc ggaatttgtc gaaatcgcac
     1741 tcacggccca gcatcccagt cccgcgcatc tcgttcatgt cagccctcat tccgccaccc
     1801 cggtcatcct cgcgggtcac tgtttctcgc gccgcatctc gctcgacgag ttgactgtgg
     1861 cgtgaagcga gcgtgcgtat tggatggcat gctcgatatt catggccgag gcggtgcgcg
     1921 cgaactcctt gatcgcgaga acggcgggcg gaggcgcctt cagcagcgtt gcacagagcc
     1981 gctccagcgc ctggtcgagc cccgctgcag gcgccacctc gctgacgatg ccgacctgca
     2041 gcgcgcgggg cgcatcgagc gtcgccgtcg aataggccct atacatgagc gccttttcgg
     2101 agactctccc gagaagggcc gacctcgcca tggttggcat gatgttgtgt ccgaactccg
     2161 gaagctggaa gctcgcgtcg tctgccgcaa tggtgatgtc cgccgccgcg gcgagcgcgc
     2221 agccgaatcc gagcgccttc ccctgcacga ccgcgatgat cggcacgggg gagcgccgga
     2281 aggcgccgta gcaccgaaaa acgacatcat tcgtgctgcg cagggcgagg gcctccggcc
     2341 gggtatcacg tggcttgccc atcgaggcgc ggccgacgca gaaatcgttg ccagcagcac
     2401 gtagcacgac gactcgcgcc cgttcggcgg cctcttccag aagcgccgcc aggcggcccg
     2461 ccatgtcgtt ggacatggcg ttgccgctat cgggctcgtt cagcgtgatg tggaggatat
     2521 cgccttccat gcggtcgagg attgcattgc tcatgggatt tcactctgag attgggcgtt
     2581 gcgaatggcg cgccacaccc gtgccgacgt ggcg
//
LOCUS       DATAIQ010001204         1653 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Beijerinckiaceae bacterium isolate SMAG_U6888
            k141_91863, whole genome shotgun sequence.
ACCESSION   DATAIQ010001204 DATAIQ010000000
VERSION     DATAIQ010001204.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955506
            Sequence Read Archive: SRR12721349
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Beijerinckiaceae bacterium (soil metagenome)
  ORGANISM  Beijerinckiaceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Beijerinckiaceae.
REFERENCE   1  (bases 1 to 1653)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1653)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:28:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,964
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 9 of 46
            Pseudo Genes (incomplete)         :: 32 of 46
            Pseudo Genes (internal stop)      :: 6 of 46
            Pseudo Genes (multiple problems)  :: 1 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1653
                     /organism="Beijerinckiaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_91863"
                     /isolate="SMAG_U6888"
                     /isolation_source="soil"
                     /db_xref="taxon:1978229"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.14 N 105.42 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..723)
                     /locus_tag="VHN20_19930"
     CDS             complement(<1..723)
                     /locus_tag="VHN20_19930"
                     /inference="COORDINATES: protein motif:HMM:NF012880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent dehydrogenase
                     E1 component subunit alpha"
                     /protein_id="HEX2728097.1"
                     /translation="MQTDNCVEVPGDALADVATARLLEFYRTMVLIRQFEETVRSLYA
                     AGLIPGLVHLCSGQEATNVGVVAALERTDFIASHHRGHGHCIAKGTALELLMAEILGR
                     AAGISGGRGGTLHMFDPGVGNLGTNGIVGGGIPLATGAALTAKTRRTGQVAVAFFGDG
                     ALNQGLLHECMNMAAVWKLPVVYVCENNGYGEYTAIETVTAGRNLTARGEVFDIPSEM
                     IDGMDVMAVHRAAAAAVKRARGG"
     gene            complement(772..>1653)
                     /locus_tag="VHN20_19935"
     CDS             complement(772..>1653)
                     /locus_tag="VHN20_19935"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEX2728098.1"
                     /translation="SRHLGRHLPGNPSLVVKNMPGAGGMRLANYLYTLARQDGTEIGI
                     VNQGAAMSQALNEQGVQYDARRLGWIGSTHQTVNVAFSWHMSPVRTIQDVQKQELIVG
                     TTGAGSATSFYPELMNQFLGTKFKVIGGYKGNNDMHLAIERGEVNGRGAYNWANLRDQ
                     TTWVRDKKVHILVQMGADRAADLPDVPLLHELAKDPADREVLEFVSLSPALGRPFVTP
                     PGLPPERLALLRRGFEAMLKDPEFLAEAAGSRLEIDPIPGEKLAEIVERTLRASPETV
                     KRAKLAMSRGAEAKKEQ"
BASE COUNT          241 a          591 c          522 g          299 t
ORIGIN      
        1 tcctccgcgc gcccgcttca cggcggcagc ggcggcccgg tgcaccgcca tcacgtccat
       61 gccgtcgatc atctccgacg ggatgtcgaa gacttcgccg cgggccgtca ggttccggcc
      121 tgcggtcacg gtttcgatcg ccgtgtattc gccgtaacca ttgttctcgc acacgtagac
      181 gaccggcagc ttccagaccg cggccatgtt catgcattca tgcaggagcc cttggttgag
      241 cgcgccgtcg ccgaagaacg ccaccgcgac ctggccggtg cggcgcgtct tcgccgtcag
      301 cgccgctccc gtcgcgagcg gaatgccgcc cccgacgatg ccgttggtgc cgaggtttcc
      361 gacgcccggg tcgaacatgt gcagcgtgcc gccccgcccg ccgctgatgc cggcggcccg
      421 cccgaggatc tcggccatca gcagctcgag cgcagtgccc ttggcgatgc aatggccgtg
      481 gccccgatgg tggctggcga tgaagtcggt ccgctcgagc gcggcgacga cgccgacatt
      541 cgtcgcctcc tggccggagc acagatgcac gagccccgga atcagtccgg ccgcataaag
      601 actccggacg gtttcctcga actgccggat cagcaccatc gtccggtaaa attccagcaa
      661 ccgggcagtc gcgacatcgg ccagcgcgtc gcctggcact tcgacgcaat tatctgtctg
      721 caagatcctg gttccgctgc gaggcaatca cgtaccgctt gcgtccacgc ctcattgttc
      781 cttcttcgcc tcggcgccgc gactcatggc cagcttcgcg cgcttgaccg tctccggtga
      841 tgcccgcagc gtgcgctcga cgatctcggc cagcttctcc ccggggatcg gatcgatctc
      901 gagccgggaa cccgccgcct cggccaggaa ctccgggtct ttcagcatcg cctcgaagcc
      961 tctgcgcagc agcgcgagcc gctccggcgg aaggcccggc ggcgtcacga acggccgtcc
     1021 cagcgccggt gacagcgaga cgaattccag aacctcgcgg tcggccgggt ccttggcaag
     1081 ctcgtgcagc agcggcacgt ccggcaggtc tgctgcccgg tccgcgccca tctgcacgag
     1141 gatatgcacc ttcttgtcgc gcacccacgt cgtctggtcg cggaggttcg cccagttgta
     1201 ggcgccgcgg ccgttcacct cgccgcgctc gatcgccagg tgcatgtcgt tgttgccctt
     1261 gtagccgccg atcaccttga acttcgtgcc gaggaactgg ttcatcagct cgggatagaa
     1321 gctcgtcgcc gagccggcgc cggtcgtccc gacgatcagc tcctgcttct gcacgtcctg
     1381 gatcgtcctg accggtgaca tgtgccatga aaaggcgacg ttcacggtct ggtgcgtcga
     1441 gccgatccag cccaagcggc gcgcgtcgta ttgcacgccc tgctcgttca gcgcctggct
     1501 catcgccgcg ccctggttga cgatgccgat ctcggtgccg tcctggcgcg ccagcgtgta
     1561 aaggtagttg gcgaggcgca tgccccccgc gccgggcatg ttcttgacga cgaggctcgg
     1621 attgccggga agatgcctgc cgagatggcg cga
//
